BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006462
(644 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 319 bits (817), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 150/291 (51%), Positives = 203/291 (69%), Gaps = 13/291 (4%)
Query: 9 FPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRV 68
+ ++ DY L E +G G +A V A C P E VAIK ++LEKC +D + +E+Q M
Sbjct: 10 WSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQ 69
Query: 69 TNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEG------FEEPVIATLLRE 122
+HPN++ + SF LW+VM ++GGS L I+K +G +E IAT+LRE
Sbjct: 70 CHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILRE 129
Query: 123 TLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGD--RQRSRNTFVGT 180
L+ L YLH +G IHRDVKAGNIL+ +G++++ADFGVSA + GD R + R TFVGT
Sbjct: 130 VLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGT 189
Query: 181 PCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGL-- 238
PCWMAPEVM+Q+ GYDFKADIWSFGITA+ELA G AP+ KYPPMKVL++TLQN PP L
Sbjct: 190 PCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLET 249
Query: 239 ---DYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFKHARSNDFL 286
D E K++ KSF+++++ CL KDP+KRPTA +L++H FF+ A++ +FL
Sbjct: 250 GVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAKNKEFL 300
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 313 bits (801), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 148/286 (51%), Positives = 199/286 (69%), Gaps = 13/286 (4%)
Query: 9 FPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRV 68
+ ++ DY L E +G G +A V A C P E VAIK ++LEKC +D + +E+Q M
Sbjct: 5 WSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQ 64
Query: 69 TNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEG------FEEPVIATLLRE 122
+HPN++ + SF LW+VM ++GGS L I+K +G +E IAT+LRE
Sbjct: 65 CHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILRE 124
Query: 123 TLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGD--RQRSRNTFVGT 180
L+ L YLH +G IHRDVKAGNIL+ +G++++ADFGVSA + GD R + R TFVGT
Sbjct: 125 VLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGT 184
Query: 181 PCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGL-- 238
PCWMAPEVM+Q+ GYDFKADIWSFGITA+ELA G AP+ KYPPMKVL++TLQN PP L
Sbjct: 185 PCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLET 244
Query: 239 ---DYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFKHAR 281
D E K++ KSF+++++ CL KDP+KRPTA +L++H FF+ A+
Sbjct: 245 GVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAK 290
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 229 bits (585), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 123/272 (45%), Positives = 171/272 (62%), Gaps = 12/272 (4%)
Query: 20 EEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAHC 79
+ +G+G VY+ + E+VAIK++DLE+ ++++ I++E+ + + P + R
Sbjct: 25 DRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFG 84
Query: 80 SFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRD 139
S+ LW++M Y+ GGS L ++K P EE IAT+LRE LK L YLH IHRD
Sbjct: 85 SYLKSTKLWIIMEYLGGGSALDLLK---PGPLEETYIATILREILKGLDYLHSERKIHRD 141
Query: 140 VKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKA 199
+KA N+L+ G +KLADFGV+ + D Q RN FVGTP WMAPEV++Q YDFKA
Sbjct: 142 IKAANVLLSEQGDVKLADFGVAGQLTDT---QIKRNXFVGTPFWMAPEVIKQ-SAYDFKA 197
Query: 200 DIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKELVTACLV 259
DIWS GITA+ELA G P S PM+VL + +N+PP L+ + SK FKE V ACL
Sbjct: 198 DIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPPTLEGQH----SKPFKEFVEACLN 253
Query: 260 KDPKKRPTAEKLMKHHFF-KHARSNDFLARSI 290
KDP+ RPTA++L+KH F ++ + FL I
Sbjct: 254 KDPRFRPTAKELLKHKFITRYTKKTSFLTELI 285
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 226 bits (575), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 124/289 (42%), Positives = 180/289 (62%), Gaps = 20/289 (6%)
Query: 20 EEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAHC 79
E +G+G V++ + ++VAIK++DLE+ ++++ I++E+ + + V + +
Sbjct: 29 ERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYG 88
Query: 80 SFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRD 139
S+ G LW++M Y+ GGS L ++++ F+E IAT+L+E LK L YLH IHRD
Sbjct: 89 SYLKGSKLWIIMEYLGGGSALDLLRAG---PFDEFQIATMLKEILKGLDYLHSEKKIHRD 145
Query: 140 VKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKA 199
+KA N+L+ G +KLADFGV+ + D Q RNTFVGTP WMAPEV+QQ YD KA
Sbjct: 146 IKAANVLLSEQGDVKLADFGVAGQLTDT---QIKRNTFVGTPFWMAPEVIQQ-SAYDSKA 201
Query: 200 DIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKELVTACLV 259
DIWS GITA+ELA G P S PM+VL + +N PP L + F+KSFKE + ACL
Sbjct: 202 DIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLVGD----FTKSFKEFIDACLN 257
Query: 260 KDPKKRPTAEKLMKHHFF-KHARSNDFLARSIVDNLAPLGERFRMLKAK 307
KDP RPTA++L+KH F K+++ +L I +RF+ KA+
Sbjct: 258 KDPSFRPTAKELLKHKFIVKNSKKTSYLTELI--------DRFKRWKAE 298
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 122/291 (41%), Positives = 182/291 (62%), Gaps = 20/291 (6%)
Query: 20 EEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAHC 79
E++G+G V++ + ++VAIK++DLE+ ++++ I++E+ + + P V + +
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 80 SFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRD 139
S+ LW++M Y+ GGS L +++ P +E IAT+LRE LK L YLH IHRD
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLLE---PGPLDETQIATILREILKGLDYLHSEKKIHRD 129
Query: 140 VKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKA 199
+KA N+L+ +G +KLADFGV+ + D Q RNTFVGTP WMAPEV++Q YD KA
Sbjct: 130 IKAANVLLSEHGEVKLADFGVAGQLTDT---QIKRNTFVGTPFWMAPEVIKQ-SAYDSKA 185
Query: 200 DIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKELVTACLV 259
DIWS GITA+ELA G P S+ PMKVL + +N PP L + +SK KE V ACL
Sbjct: 186 DIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTL----EGNYSKPLKEFVEACLN 241
Query: 260 KDPKKRPTAEKLMKHHF-FKHARSNDFLARSIVDNLAPLGERFRMLKAKEA 309
K+P RPTA++L+KH F ++A+ +L I +R++ KA+++
Sbjct: 242 KEPSFRPTAKELLKHKFILRNAKKTSYLTELI--------DRYKRWKAEQS 284
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 223 bits (567), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 119/272 (43%), Positives = 173/272 (63%), Gaps = 12/272 (4%)
Query: 20 EEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAHC 79
E++G+G V++ + ++VAIK++DLE+ ++++ I++E+ + + P V + +
Sbjct: 33 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 92
Query: 80 SFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRD 139
S+ LW++M Y+ GGS L +++ P +E IAT+LRE LK L YLH IHRD
Sbjct: 93 SYLKDTKLWIIMEYLGGGSALDLLE---PGPLDETQIATILREILKGLDYLHSEKKIHRD 149
Query: 140 VKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKA 199
+KA N+L+ +G +KLADFGV+ + D Q RNTFVGTP WMAPEV++Q YD KA
Sbjct: 150 IKAANVLLSEHGEVKLADFGVAGQLTDT---QIKRNTFVGTPFWMAPEVIKQ-SAYDSKA 205
Query: 200 DIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKELVTACLV 259
DIWS GITA+ELA G P S+ PMKVL + +N PP L + +SK KE V ACL
Sbjct: 206 DIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTL----EGNYSKPLKEFVEACLN 261
Query: 260 KDPKKRPTAEKLMKHHF-FKHARSNDFLARSI 290
K+P RPTA++L+KH F ++A+ +L I
Sbjct: 262 KEPSFRPTAKELLKHKFILRNAKKTSYLTELI 293
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 221 bits (564), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 121/291 (41%), Positives = 181/291 (62%), Gaps = 20/291 (6%)
Query: 20 EEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAHC 79
E++G+G V++ + ++VAIK++DLE+ ++++ I++E+ + + P V + +
Sbjct: 28 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 87
Query: 80 SFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRD 139
S+ LW++M Y+ GGS L +++ P +E IAT+LRE LK L YLH IHRD
Sbjct: 88 SYLKDTKLWIIMEYLGGGSALDLLE---PGPLDETQIATILREILKGLDYLHSEKKIHRD 144
Query: 140 VKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKA 199
+KA N+L+ +G +KLADFGV+ + D Q RN FVGTP WMAPEV++Q YD KA
Sbjct: 145 IKAANVLLSEHGEVKLADFGVAGQLTDT---QIKRNXFVGTPFWMAPEVIKQ-SAYDSKA 200
Query: 200 DIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKELVTACLV 259
DIWS GITA+ELA G P S+ PMKVL + +N PP L + +SK KE V ACL
Sbjct: 201 DIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTL----EGNYSKPLKEFVEACLN 256
Query: 260 KDPKKRPTAEKLMKHHF-FKHARSNDFLARSIVDNLAPLGERFRMLKAKEA 309
K+P RPTA++L+KH F ++A+ +L I +R++ KA+++
Sbjct: 257 KEPSFRPTAKELLKHKFILRNAKKTSYLTELI--------DRYKRWKAEQS 299
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 221 bits (563), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 121/291 (41%), Positives = 181/291 (62%), Gaps = 20/291 (6%)
Query: 20 EEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAHC 79
E++G+G V++ + ++VAIK++DLE+ ++++ I++E+ + + P V + +
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 80 SFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRD 139
S+ LW++M Y+ GGS L +++ P +E IAT+LRE LK L YLH IHRD
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLLE---PGPLDETQIATILREILKGLDYLHSEKKIHRD 129
Query: 140 VKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKA 199
+KA N+L+ +G +KLADFGV+ + D Q RN FVGTP WMAPEV++Q YD KA
Sbjct: 130 IKAANVLLSEHGEVKLADFGVAGQLTDT---QIKRNXFVGTPFWMAPEVIKQ-SAYDSKA 185
Query: 200 DIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKELVTACLV 259
DIWS GITA+ELA G P S+ PMKVL + +N PP L + +SK KE V ACL
Sbjct: 186 DIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTL----EGNYSKPLKEFVEACLN 241
Query: 260 KDPKKRPTAEKLMKHHF-FKHARSNDFLARSIVDNLAPLGERFRMLKAKEA 309
K+P RPTA++L+KH F ++A+ +L I +R++ KA+++
Sbjct: 242 KEPSFRPTAKELLKHKFILRNAKKTSYLTELI--------DRYKRWKAEQS 284
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 208 bits (530), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 110/271 (40%), Positives = 167/271 (61%), Gaps = 10/271 (3%)
Query: 16 YRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVL 75
+ + E++GEG +VY+A+ +IVAIK + +E +DL I +E+ M+ + P+V+
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE---SDLQEIIKEISIMQQCDSPHVV 87
Query: 76 RAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGH 135
+ + S+ LW+VM Y GS I++ + E IAT+L+ TLK L YLHF
Sbjct: 88 KYYGSYFKNTDLWIVMEYCGAGSVSDIIR-LRNKTLTEDEIATILQSTLKGLEYLHFMRK 146
Query: 136 IHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLHGY 195
IHRD+KAGNIL+++ G KLADFGV+ + D + RN +GTP WMAPEV+Q++ GY
Sbjct: 147 IHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAK---RNXVIGTPFWMAPEVIQEI-GY 202
Query: 196 DFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKELVT 255
+ ADIWS GITA+E+A G P++ PM+ + M N PP + + + +S +F + V
Sbjct: 203 NCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPP--TFRKPELWSDNFTDFVK 260
Query: 256 ACLVKDPKKRPTAEKLMKHHFFKHARSNDFL 286
CLVK P++R TA +L++H F + A+ L
Sbjct: 261 QCLVKSPEQRATATQLLQHPFVRSAKGVSIL 291
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 101/274 (36%), Positives = 155/274 (56%), Gaps = 19/274 (6%)
Query: 16 YRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMR-VTNHPNV 74
+ L E VG G VY+ + ++ AIKV+D+ ++ + I++E+ ++ ++H N+
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDV--TGDEEEEIKQEINMLKKYSHHRNI 83
Query: 75 LRAHCSFTTGH------CLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALV 128
+ +F + LW+VM + GS ++K+ +E IA + RE L+ L
Sbjct: 84 ATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLS 143
Query: 129 YLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEV 188
+LH H IHRD+K N+L+ N +KL DFGVSA + R RNTF+GTP WMAPEV
Sbjct: 144 HLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGR---RNTFIGTPYWMAPEV 200
Query: 189 MQQLHG----YDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDK 244
+ YDFK+D+WS GITA+E+A G P PM+ L + +N P L + K
Sbjct: 201 IACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRL---KSK 257
Query: 245 RFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFK 278
++SK F+ + +CLVK+ +RP E+LMKH F +
Sbjct: 258 KWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIR 291
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 183 bits (465), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 100/268 (37%), Positives = 154/268 (57%), Gaps = 10/268 (3%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPN 73
K Y +E++G+G S TVY A+ + + VAI+ ++L++ + I E+ MR +PN
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ-QPKKELIINEILVMRENKNPN 78
Query: 74 VLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFH 133
++ S+ G LWVVM Y+AGGS ++ +E IA + RE L+AL +LH +
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSN 135
Query: 134 GHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLH 193
IHRD+K+ NIL+ +G++KL DFG A Q R+T VGTP WMAPEV+ +
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCA---QITPEQSKRSTMVGTPYWMAPEVVTR-K 191
Query: 194 GYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKEL 253
Y K DIWS GI A+E+ G P+ P++ L + N P L + ++ S F++
Sbjct: 192 AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPEL--QNPEKLSAIFRDF 249
Query: 254 VTACLVKDPKKRPTAEKLMKHHFFKHAR 281
+ CL D +KR +A++L++H F K A+
Sbjct: 250 LNRCLDMDVEKRGSAKELLQHQFLKIAK 277
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 181 bits (460), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 99/268 (36%), Positives = 153/268 (57%), Gaps = 10/268 (3%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPN 73
K Y +E++G+G S TVY A+ + + VAI+ ++L++ + I E+ MR +PN
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ-QPKKELIINEILVMRENKNPN 78
Query: 74 VLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFH 133
++ S+ G LWVVM Y+AGGS ++ +E IA + RE L+AL +LH +
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSN 135
Query: 134 GHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLH 193
IHRD+K+ NIL+ +G++KL DFG A Q R+ VGTP WMAPEV+ +
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCA---QITPEQSKRSXMVGTPYWMAPEVVTR-K 191
Query: 194 GYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKEL 253
Y K DIWS GI A+E+ G P+ P++ L + N P L + ++ S F++
Sbjct: 192 AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPEL--QNPEKLSAIFRDF 249
Query: 254 VTACLVKDPKKRPTAEKLMKHHFFKHAR 281
+ CL D +KR +A++L++H F K A+
Sbjct: 250 LNRCLEMDVEKRGSAKELLQHQFLKIAK 277
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 99/268 (36%), Positives = 154/268 (57%), Gaps = 10/268 (3%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPN 73
K Y +E++G+G S TVY A+ + + VAI+ ++L++ + I E+ MR +PN
Sbjct: 21 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ-QPKKELIINEILVMRENKNPN 79
Query: 74 VLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFH 133
++ S+ G LWVVM Y+AGGS ++ +E IA + RE L+AL +LH +
Sbjct: 80 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSN 136
Query: 134 GHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLH 193
IHR++K+ NIL+ +G++KL DFG A Q R+T VGTP WMAPEV+ +
Sbjct: 137 QVIHRNIKSDNILLGMDGSVKLTDFGFCA---QITPEQSKRSTMVGTPYWMAPEVVTR-K 192
Query: 194 GYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKEL 253
Y K DIWS GI A+E+ G P+ P++ L + N P L + ++ S F++
Sbjct: 193 AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPEL--QNPEKLSAIFRDF 250
Query: 254 VTACLVKDPKKRPTAEKLMKHHFFKHAR 281
+ CL D +KR +A++L++H F K A+
Sbjct: 251 LNRCLEMDVEKRGSAKELIQHQFLKIAK 278
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 99/268 (36%), Positives = 153/268 (57%), Gaps = 10/268 (3%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPN 73
K Y +E++G+G S TVY A+ + + VAI+ ++L++ + I E+ MR +PN
Sbjct: 21 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ-QPKKELIINEILVMRENKNPN 79
Query: 74 VLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFH 133
++ S+ G LWVVM Y+AGGS ++ +E IA + RE L+AL +LH +
Sbjct: 80 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSN 136
Query: 134 GHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLH 193
IHRD+K+ NIL+ +G++KL DFG A Q R+ VGTP WMAPEV+ +
Sbjct: 137 QVIHRDIKSDNILLGMDGSVKLTDFGFCA---QITPEQSKRSXMVGTPYWMAPEVVTR-K 192
Query: 194 GYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKEL 253
Y K DIWS GI A+E+ G P+ P++ L + N P L + ++ S F++
Sbjct: 193 AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPEL--QNPEKLSAIFRDF 250
Query: 254 VTACLVKDPKKRPTAEKLMKHHFFKHAR 281
+ CL D +KR +A++L++H F K A+
Sbjct: 251 LNRCLEMDVEKRGSAKELIQHQFLKIAK 278
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 99/268 (36%), Positives = 153/268 (57%), Gaps = 10/268 (3%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPN 73
K Y +E++G+G S TVY A+ + + VAI+ ++L++ + I E+ MR +PN
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ-QPKKELIINEILVMRENKNPN 78
Query: 74 VLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFH 133
++ S+ G LWVVM Y+AGGS ++ +E IA + RE L+AL +LH +
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSN 135
Query: 134 GHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLH 193
IHRD+K+ NIL+ +G++KL DFG A Q R+ VGTP WMAPEV+ +
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCA---QITPEQSKRSEMVGTPYWMAPEVVTR-K 191
Query: 194 GYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKEL 253
Y K DIWS GI A+E+ G P+ P++ L + N P L + ++ S F++
Sbjct: 192 AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPEL--QNPEKLSAIFRDF 249
Query: 254 VTACLVKDPKKRPTAEKLMKHHFFKHAR 281
+ CL D +KR +A++L++H F K A+
Sbjct: 250 LNRCLDMDVEKRGSAKELLQHQFLKIAK 277
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 99/265 (37%), Positives = 152/265 (57%), Gaps = 11/265 (4%)
Query: 16 YRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVL 75
+ + E+G+G VY+A + + A KV+D K +L+ E+ + +HPN++
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVID-TKSEEELEDYMVEIDILASCDHPNIV 97
Query: 76 RAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGH 135
+ +F + LW+++ + AGG+ +M E I + ++TL AL YLH +
Sbjct: 98 KLLDAFYYENNLWILIEFCAGGAVDAVMLE-LERPLTESQIQVVCKQTLDALNYLHDNKI 156
Query: 136 IHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ----Q 191
IHRD+KAGNIL +G IKLADFGVSA + QR R++F+GTP WMAPEV+ +
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVSAK--NTRTIQR-RDSFIGTPYWMAPEVVMCETSK 213
Query: 192 LHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFK 251
YD+KAD+WS GIT +E+A P + PM+VLL ++ PP L + R+S +FK
Sbjct: 214 DRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTL--AQPSRWSSNFK 271
Query: 252 ELVTACLVKDPKKRPTAEKLMKHHF 276
+ + CL K+ R T +L++H F
Sbjct: 272 DFLKKCLEKNVDARWTTSQLLQHPF 296
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 169 bits (428), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 99/265 (37%), Positives = 152/265 (57%), Gaps = 11/265 (4%)
Query: 16 YRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVL 75
+ + E+G+G VY+A + + A KV+D K +L+ E+ + +HPN++
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDT-KSEEELEDYMVEIDILASCDHPNIV 97
Query: 76 RAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGH 135
+ +F + LW+++ + AGG+ +M E I + ++TL AL YLH +
Sbjct: 98 KLLDAFYYENNLWILIEFCAGGAVDAVMLE-LERPLTESQIQVVCKQTLDALNYLHDNKI 156
Query: 136 IHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ----Q 191
IHRD+KAGNIL +G IKLADFGVSA + QR R++F+GTP WMAPEV+ +
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVSAK--NTRXIQR-RDSFIGTPYWMAPEVVMCETSK 213
Query: 192 LHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFK 251
YD+KAD+WS GIT +E+A P + PM+VLL ++ PP L + R+S +FK
Sbjct: 214 DRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTL--AQPSRWSSNFK 271
Query: 252 ELVTACLVKDPKKRPTAEKLMKHHF 276
+ + CL K+ R T +L++H F
Sbjct: 272 DFLKKCLEKNVDARWTTSQLLQHPF 296
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 168 bits (426), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 99/265 (37%), Positives = 151/265 (56%), Gaps = 11/265 (4%)
Query: 16 YRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVL 75
+ + E+G+G VY+A + + A KV+D K +L+ E+ + +HPN++
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDT-KSEEELEDYMVEIDILASCDHPNIV 97
Query: 76 RAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGH 135
+ +F + LW+++ + AGG+ +M E I + ++TL AL YLH +
Sbjct: 98 KLLDAFYYENNLWILIEFCAGGAVDAVMLE-LERPLTESQIQVVCKQTLDALNYLHDNKI 156
Query: 136 IHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ----Q 191
IHRD+KAGNIL +G IKLADFGVSA + QR R+ F+GTP WMAPEV+ +
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVSAK--NTRXIQR-RDXFIGTPYWMAPEVVMCETSK 213
Query: 192 LHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFK 251
YD+KAD+WS GIT +E+A P + PM+VLL ++ PP L + R+S +FK
Sbjct: 214 DRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTL--AQPSRWSSNFK 271
Query: 252 ELVTACLVKDPKKRPTAEKLMKHHF 276
+ + CL K+ R T +L++H F
Sbjct: 272 DFLKKCLEKNVDARWTTSQLLQHPF 296
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 103/315 (32%), Positives = 153/315 (48%), Gaps = 49/315 (15%)
Query: 16 YRLYEEVGEGVS--ATVYRALCIPLNEIVAIKVLDLEKCNNDL-DGIRREVQTMRVTNHP 72
Y L +G+G TV A P E V ++ ++LE C+N++ ++ E+ ++ NHP
Sbjct: 27 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHP 86
Query: 73 NVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHF 132
N++ +F + LWVV +MA GS ++ + + +G E IA +L+ LKAL Y+H
Sbjct: 87 NIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHH 146
Query: 133 HGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTF----VGTPCWMAPEV 188
G++HR VKA +ILI +G + L+ + M G RQR + F V W++PEV
Sbjct: 147 MGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEV 206
Query: 189 MQQ-LHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGL--------- 238
+QQ L GYD K+DI+S GITA ELA+GH PF P ++LL L P L
Sbjct: 207 LQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAE 266
Query: 239 --------------------------------DYERDKRFSKSFKELVTACLVKDPKKRP 266
+ + FS F V CL ++P RP
Sbjct: 267 ELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARP 326
Query: 267 TAEKLMKHHFFKHAR 281
+A L+ H FFK +
Sbjct: 327 SASTLLNHSFFKQIK 341
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 103/315 (32%), Positives = 153/315 (48%), Gaps = 49/315 (15%)
Query: 16 YRLYEEVGEGVS--ATVYRALCIPLNEIVAIKVLDLEKCNNDL-DGIRREVQTMRVTNHP 72
Y L +G+G TV A P E V ++ ++LE C+N++ ++ E+ ++ NHP
Sbjct: 11 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHP 70
Query: 73 NVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHF 132
N++ +F + LWVV +MA GS ++ + + +G E IA +L+ LKAL Y+H
Sbjct: 71 NIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHH 130
Query: 133 HGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTF----VGTPCWMAPEV 188
G++HR VKA +ILI +G + L+ + M G RQR + F V W++PEV
Sbjct: 131 MGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEV 190
Query: 189 MQQ-LHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGL--------- 238
+QQ L GYD K+DI+S GITA ELA+GH PF P ++LL L P L
Sbjct: 191 LQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAE 250
Query: 239 --------------------------------DYERDKRFSKSFKELVTACLVKDPKKRP 266
+ + FS F V CL ++P RP
Sbjct: 251 ELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARP 310
Query: 267 TAEKLMKHHFFKHAR 281
+A L+ H FFK +
Sbjct: 311 SASTLLNHSFFKQIK 325
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/265 (37%), Positives = 137/265 (51%), Gaps = 16/265 (6%)
Query: 21 EVGEGVSATVYRALCIPLNEIVAIKVLDL--EKCNNDLDGIRREVQTMRVTNHPNVLRAH 78
E+G G VY A + +E+VAIK + ++ N I +EV+ ++ HPN ++
Sbjct: 61 EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 120
Query: 79 CSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHR 138
+ H W+VM Y G + + + + +E IA + L+ L YLH H IHR
Sbjct: 121 GCYLREHTAWLVMEYCLGSAS--DLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHR 178
Query: 139 DVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLH--GYD 196
DVKAGNIL+ G +KL DFG ++ M A N FVGTP WMAPEV+ + YD
Sbjct: 179 DVKAGNILLSEPGLVKLGDFGSASIMAPA-------NXFVGTPYWMAPEVILAMDEGQYD 231
Query: 197 FKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKELVTA 256
K D+WS GIT +ELA P M L QN P L + +S+ F+ V +
Sbjct: 232 GKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPAL---QSGHWSEYFRNFVDS 288
Query: 257 CLVKDPKKRPTAEKLMKHHFFKHAR 281
CL K P+ RPT+E L+KH F R
Sbjct: 289 CLQKIPQDRPTSEVLLKHRFVLRER 313
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/265 (37%), Positives = 137/265 (51%), Gaps = 16/265 (6%)
Query: 21 EVGEGVSATVYRALCIPLNEIVAIKVLDL--EKCNNDLDGIRREVQTMRVTNHPNVLRAH 78
E+G G VY A + +E+VAIK + ++ N I +EV+ ++ HPN ++
Sbjct: 22 EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 81
Query: 79 CSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHR 138
+ H W+VM Y G + + + + +E IA + L+ L YLH H IHR
Sbjct: 82 GCYLREHTAWLVMEYCLGSAS--DLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHR 139
Query: 139 DVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLH--GYD 196
DVKAGNIL+ G +KL DFG ++ M A N FVGTP WMAPEV+ + YD
Sbjct: 140 DVKAGNILLSEPGLVKLGDFGSASIMAPA-------NXFVGTPYWMAPEVILAMDEGQYD 192
Query: 197 FKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKELVTA 256
K D+WS GIT +ELA P M L QN P L + +S+ F+ V +
Sbjct: 193 GKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPAL---QSGHWSEYFRNFVDS 249
Query: 257 CLVKDPKKRPTAEKLMKHHFFKHAR 281
CL K P+ RPT+E L+KH F R
Sbjct: 250 CLQKIPQDRPTSEVLLKHRFVLRER 274
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 166 bits (419), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 98/288 (34%), Positives = 157/288 (54%), Gaps = 11/288 (3%)
Query: 16 YRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVL 75
+ + E+G+G VY+A + A KV++ K +L+ E++ + +HP ++
Sbjct: 21 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIE-TKSEEELEDYIVEIEILATCDHPYIV 79
Query: 76 RAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGH 135
+ ++ LW+++ + GG+ IM G EP I + R+ L+AL +LH
Sbjct: 80 KLLGAYYHDGKLWIMIEFCPGGAVDAIMLE-LDRGLTEPQIQVVCRQMLEALNFLHSKRI 138
Query: 136 IHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVM----QQ 191
IHRD+KAGN+L+ G I+LADFGVSA + R++F+GTP WMAPEV+ +
Sbjct: 139 IHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT---LQKRDSFIGTPYWMAPEVVMCETMK 195
Query: 192 LHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFK 251
YD+KADIWS GIT +E+A P + PM+VLL ++ PP L ++S F+
Sbjct: 196 DTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTL--LTPSKWSVEFR 253
Query: 252 ELVTACLVKDPKKRPTAEKLMKHHFFKHARSNDFLARSIVDNLAPLGE 299
+ + L K+P+ RP+A +L++H F SN L + + A + E
Sbjct: 254 DFLKIALDKNPETRPSAAQLLEHPFVSSITSNKALRELVAEAKAEVME 301
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 165 bits (418), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 98/288 (34%), Positives = 157/288 (54%), Gaps = 11/288 (3%)
Query: 16 YRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVL 75
+ + E+G+G VY+A + A KV++ K +L+ E++ + +HP ++
Sbjct: 13 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIE-TKSEEELEDYIVEIEILATCDHPYIV 71
Query: 76 RAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGH 135
+ ++ LW+++ + GG+ IM G EP I + R+ L+AL +LH
Sbjct: 72 KLLGAYYHDGKLWIMIEFCPGGAVDAIMLE-LDRGLTEPQIQVVCRQMLEALNFLHSKRI 130
Query: 136 IHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVM----QQ 191
IHRD+KAGN+L+ G I+LADFGVSA + R++F+GTP WMAPEV+ +
Sbjct: 131 IHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT---LQKRDSFIGTPYWMAPEVVMCETMK 187
Query: 192 LHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFK 251
YD+KADIWS GIT +E+A P + PM+VLL ++ PP L ++S F+
Sbjct: 188 DTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTL--LTPSKWSVEFR 245
Query: 252 ELVTACLVKDPKKRPTAEKLMKHHFFKHARSNDFLARSIVDNLAPLGE 299
+ + L K+P+ RP+A +L++H F SN L + + A + E
Sbjct: 246 DFLKIALDKNPETRPSAAQLLEHPFVSSITSNKALRELVAEAKAEVME 293
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 98/264 (37%), Positives = 150/264 (56%), Gaps = 11/264 (4%)
Query: 18 LYEEVGE-GVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLR 76
+E +GE G VY+A + + A KV+D K +L+ E+ + +HPN+++
Sbjct: 13 FWEIIGELGDFGKVYKAQNKETSVLAAAKVID-TKSEEELEDYMVEIDILASCDHPNIVK 71
Query: 77 AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHI 136
+F + LW+++ + AGG+ +M E I + ++TL AL YLH + I
Sbjct: 72 LLDAFYYENNLWILIEFCAGGAVDAVMLE-LERPLTESQIQVVCKQTLDALNYLHDNKII 130
Query: 137 HRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ----QL 192
HRD+KAGNIL +G IKLADFGVSA + + R++F+GTP WMAPEV+ +
Sbjct: 131 HRDLKAGNILFTLDGDIKLADFGVSAK--NTRTXIQRRDSFIGTPYWMAPEVVMCETSKD 188
Query: 193 HGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKE 252
YD+KAD+WS GIT +E+A P + PM+VLL ++ PP L + R+S +FK+
Sbjct: 189 RPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTL--AQPSRWSSNFKD 246
Query: 253 LVTACLVKDPKKRPTAEKLMKHHF 276
+ CL K+ R T +L++H F
Sbjct: 247 FLKKCLEKNVDARWTTSQLLQHPF 270
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 161 bits (408), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 101/274 (36%), Positives = 143/274 (52%), Gaps = 14/274 (5%)
Query: 11 VDAKDYRLYEE----VGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTM 66
VD D R Y + +GEG + V A ++VA+K +DL K + + EV M
Sbjct: 144 VDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRK-QQRRELLFNEVVIM 202
Query: 67 RVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKA 126
R H NV+ + S+ G LWVVM ++ GG+ I+ E IA + L+A
Sbjct: 203 RDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR---MNEEQIAAVCLAVLQA 259
Query: 127 LVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAP 186
L LH G IHRD+K+ +IL+ +G +KL+DFG A + R R VGTP WMAP
Sbjct: 260 LSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR---RKXLVGTPYWMAP 316
Query: 187 EVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRF 246
E++ +L Y + DIWS GI +E+ G P+ PP+K + M N PP L + +
Sbjct: 317 ELISRL-PYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRL--KNLHKV 373
Query: 247 SKSFKELVTACLVKDPKKRPTAEKLMKHHFFKHA 280
S S K + LV+DP +R TA +L+KH F A
Sbjct: 374 SPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKA 407
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/274 (36%), Positives = 143/274 (52%), Gaps = 14/274 (5%)
Query: 11 VDAKDYRLYEE----VGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTM 66
VD D R Y + +GEG + V A ++VA+K +DL K + + EV M
Sbjct: 67 VDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRK-QQRRELLFNEVVIM 125
Query: 67 RVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKA 126
R H NV+ + S+ G LWVVM ++ GG+ I+ E IA + L+A
Sbjct: 126 RDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR---MNEEQIAAVCLAVLQA 182
Query: 127 LVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAP 186
L LH G IHRD+K+ +IL+ +G +KL+DFG A + R R VGTP WMAP
Sbjct: 183 LSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR---RKXLVGTPYWMAP 239
Query: 187 EVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRF 246
E++ +L Y + DIWS GI +E+ G P+ PP+K + M N PP L + +
Sbjct: 240 ELISRL-PYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRL--KNLHKV 296
Query: 247 SKSFKELVTACLVKDPKKRPTAEKLMKHHFFKHA 280
S S K + LV+DP +R TA +L+KH F A
Sbjct: 297 SPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKA 330
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 101/274 (36%), Positives = 143/274 (52%), Gaps = 14/274 (5%)
Query: 11 VDAKDYRLYEE----VGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTM 66
VD D R Y + +GEG + V A ++VA+K +DL K + + EV M
Sbjct: 24 VDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRK-QQRRELLFNEVVIM 82
Query: 67 RVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKA 126
R H NV+ + S+ G LWVVM ++ GG+ I+ E IA + L+A
Sbjct: 83 RDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR---MNEEQIAAVCLAVLQA 139
Query: 127 LVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAP 186
L LH G IHRD+K+ +IL+ +G +KL+DFG A + R R VGTP WMAP
Sbjct: 140 LSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR---RKXLVGTPYWMAP 196
Query: 187 EVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRF 246
E++ +L Y + DIWS GI +E+ G P+ PP+K + M N PP L + +
Sbjct: 197 ELISRL-PYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRL--KNLHKV 253
Query: 247 SKSFKELVTACLVKDPKKRPTAEKLMKHHFFKHA 280
S S K + LV+DP +R TA +L+KH F A
Sbjct: 254 SPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKA 287
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 101/274 (36%), Positives = 143/274 (52%), Gaps = 14/274 (5%)
Query: 11 VDAKDYRLYEE----VGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTM 66
VD D R Y + +GEG + V A ++VA+K +DL K + + EV M
Sbjct: 22 VDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRK-QQRRELLFNEVVIM 80
Query: 67 RVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKA 126
R H NV+ + S+ G LWVVM ++ GG+ I+ E IA + L+A
Sbjct: 81 RDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR---MNEEQIAAVCLAVLQA 137
Query: 127 LVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAP 186
L LH G IHRD+K+ +IL+ +G +KL+DFG A + R R VGTP WMAP
Sbjct: 138 LSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR---RKXLVGTPYWMAP 194
Query: 187 EVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRF 246
E++ +L Y + DIWS GI +E+ G P+ PP+K + M N PP L + +
Sbjct: 195 ELISRL-PYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRL--KNLHKV 251
Query: 247 SKSFKELVTACLVKDPKKRPTAEKLMKHHFFKHA 280
S S K + LV+DP +R TA +L+KH F A
Sbjct: 252 SPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKA 285
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 101/274 (36%), Positives = 143/274 (52%), Gaps = 14/274 (5%)
Query: 11 VDAKDYRLYEE----VGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTM 66
VD D R Y + +GEG + V A ++VA+K +DL K + + EV M
Sbjct: 13 VDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRK-QQRRELLFNEVVIM 71
Query: 67 RVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKA 126
R H NV+ + S+ G LWVVM ++ GG+ I+ E IA + L+A
Sbjct: 72 RDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR---MNEEQIAAVCLAVLQA 128
Query: 127 LVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAP 186
L LH G IHRD+K+ +IL+ +G +KL+DFG A + R R VGTP WMAP
Sbjct: 129 LSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR---RKXLVGTPYWMAP 185
Query: 187 EVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRF 246
E++ +L Y + DIWS GI +E+ G P+ PP+K + M N PP L + +
Sbjct: 186 ELISRL-PYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRL--KNLHKV 242
Query: 247 SKSFKELVTACLVKDPKKRPTAEKLMKHHFFKHA 280
S S K + LV+DP +R TA +L+KH F A
Sbjct: 243 SPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKA 276
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 159 bits (401), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 101/274 (36%), Positives = 143/274 (52%), Gaps = 14/274 (5%)
Query: 11 VDAKDYRLYEE----VGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTM 66
VD D R Y + +GEG + V A ++VA+K +DL K + + EV M
Sbjct: 17 VDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRK-QQRRELLFNEVVIM 75
Query: 67 RVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKA 126
R H NV+ + S+ G LWVVM ++ GG+ I+ E IA + L+A
Sbjct: 76 RDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR---MNEEQIAAVCLAVLQA 132
Query: 127 LVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAP 186
L LH G IHRD+K+ +IL+ +G +KL+DFG A + R R VGTP WMAP
Sbjct: 133 LSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR---RKXLVGTPYWMAP 189
Query: 187 EVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRF 246
E++ +L Y + DIWS GI +E+ G P+ PP+K + M N PP L + +
Sbjct: 190 ELISRL-PYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRL--KNLHKV 246
Query: 247 SKSFKELVTACLVKDPKKRPTAEKLMKHHFFKHA 280
S S K + LV+DP +R TA +L+KH F A
Sbjct: 247 SPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKA 280
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/273 (35%), Positives = 146/273 (53%), Gaps = 13/273 (4%)
Query: 10 PVDAKDYRL-YEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRV 68
P D ++Y + ++GEG + V A + VA+K +DL K + + EV MR
Sbjct: 40 PGDPREYLANFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK-QQRRELLFNEVVIMRD 98
Query: 69 TNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALV 128
+H NV+ + S+ G LWVVM ++ GG+ I+ E IAT+ L+AL
Sbjct: 99 YHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTR---MNEEQIATVCLSVLRALS 155
Query: 129 YLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEV 188
YLH G IHRD+K+ +IL+ S+G IKL+DFG A R VGTP WMAPEV
Sbjct: 156 YLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCA---QVSKEVPKRKXLVGTPYWMAPEV 212
Query: 189 MQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGL-DYERDKRFS 247
+ +L Y + DIWS GI +E+ G P+ PP++ + + PP + D +
Sbjct: 213 ISRL-PYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDSLPPRVKDLHKVSSVL 271
Query: 248 KSFKELVTACLVKDPKKRPTAEKLMKHHFFKHA 280
+ F +L+ LV++P +R TA++L+ H F K A
Sbjct: 272 RGFLDLM---LVREPSQRATAQELLGHPFLKLA 301
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 100/299 (33%), Positives = 150/299 (50%), Gaps = 22/299 (7%)
Query: 8 RFPVDAKDYRL----YEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREV 63
R VD D RL Y ++GEG + V A VA+K++DL K + + EV
Sbjct: 35 RMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRK-QQRRELLFNEV 93
Query: 64 QTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRET 123
MR H NV+ + S+ G LWV+M ++ GG+ I+ E IAT+
Sbjct: 94 VIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVR---LNEEQIATVCEAV 150
Query: 124 LKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCW 183
L+AL YLH G IHRD+K+ +IL+ +G +KL+DFG A R VGTP W
Sbjct: 151 LQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCA---QISKDVPKRKXLVGTPYW 207
Query: 184 MAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERD 243
MAPEV+ + Y + DIWS GI +E+ G P+ P++ + + PP L +
Sbjct: 208 MAPEVISR-SLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKL--KNS 264
Query: 244 KRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFKHARSNDFLARSIVDNLAPLGERFR 302
+ S ++ + LV+DP++R TA++L+ H F L + + L PL + +R
Sbjct: 265 HKVSPVLRDFLERMLVRDPQERATAQELLDHPF--------LLQTGLPECLVPLIQLYR 315
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/273 (33%), Positives = 141/273 (51%), Gaps = 16/273 (5%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNV 74
D+ E+G G V++ P ++A K++ LE + I RE+Q + N P +
Sbjct: 10 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 69
Query: 75 LRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLH-FH 133
+ + +F + + + M +M GGS ++K A E ++ + +K L YL H
Sbjct: 70 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKH 127
Query: 134 GHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLH 193
+HRDVK NIL++S G IKL DFGVS + D N FVGT +M+PE +Q H
Sbjct: 128 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID-----EMANEFVGTRSYMSPERLQGTH 182
Query: 194 GYDFKADIWSFGITALELAHGHAPFSKYPPMKV--LLMTLQNAPPGLDYERDKRFSKSFK 251
Y ++DIWS G++ +E+A G P PPM + LL + N PP FS F+
Sbjct: 183 -YSVQSDIWSMGLSLVEMAVGRYP---RPPMAIFELLDYIVNEPP--PKLPSAVFSLEFQ 236
Query: 252 ELVTACLVKDPKKRPTAEKLMKHHFFKHARSND 284
+ V CL+K+P +R ++LM H F K + + +
Sbjct: 237 DFVNKCLIKNPAERADLKQLMVHAFIKRSDAEE 269
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/280 (32%), Positives = 143/280 (51%), Gaps = 20/280 (7%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNV 74
D+ E+G G V++ P ++A K++ LE + I RE+Q + N P +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 75 LRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLH-FH 133
+ + +F + + + M +M GGS ++K A E ++ + +K L YL H
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKH 124
Query: 134 GHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLH 193
+HRDVK NIL++S G IKL DFGVS + D+ N+FVGT +M+PE +Q H
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-----MANSFVGTRSYMSPERLQGTH 179
Query: 194 GYDFKADIWSFGITALELAHGHAPF-------SKYPPMKV--LLMTLQNAPPGLDYERDK 244
Y ++DIWS G++ +E+A G P PPM + LL + N PP
Sbjct: 180 -YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPP--PKLPSG 236
Query: 245 RFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFKHARSND 284
FS F++ V CL+K+P +R ++LM H F K + + +
Sbjct: 237 VFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAEE 276
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/274 (32%), Positives = 142/274 (51%), Gaps = 14/274 (5%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNV 74
D+ E+G G V++ P ++A K++ LE + I RE+Q + N P +
Sbjct: 26 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 85
Query: 75 LRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLH-FH 133
+ + +F + + + M +M GGS ++K A E ++ + +K L YL H
Sbjct: 86 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKH 143
Query: 134 GHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLH 193
+HRDVK NIL++S G IKL DFGVS + D+ N+FVGT +M+PE +Q H
Sbjct: 144 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-----MANSFVGTRSYMSPERLQGTH 198
Query: 194 GYDFKADIWSFGITALELAHGHAPF-SKYPPMKV--LLMTLQNAPPGLDYERDKRFSKSF 250
Y ++DIWS G++ +E+A G P S M + LL + N PP FS F
Sbjct: 199 -YSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPP--PKLPSGVFSLEF 255
Query: 251 KELVTACLVKDPKKRPTAEKLMKHHFFKHARSND 284
++ V CL+K+P +R ++LM H F K + + +
Sbjct: 256 QDFVNKCLIKNPAERADLKQLMVHAFIKRSDAEE 289
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 132/280 (47%), Gaps = 15/280 (5%)
Query: 7 KRFPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQT- 65
+R+ + D E+G G V++ ++A+K + + I ++
Sbjct: 18 QRYQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVV 77
Query: 66 MRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
++ + P +++ +F T +++ M M G+C +K E ++ + +K
Sbjct: 78 LKSHDCPYIVQCFGTFITNTDVFIAMELM--GTCAEKLKKRMQGPIPERILGKMTVAIVK 135
Query: 126 ALVYL-HFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWM 184
AL YL HG IHRDVK NIL+D G IKL DFG+S + D + RS G +M
Sbjct: 136 ALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRS----AGCAAYM 191
Query: 185 APEVMQ----QLHGYDFKADIWSFGITALELAHGHAPFSKYPP-MKVLLMTLQNAPPGLD 239
APE + YD +AD+WS GI+ +ELA G P+ +VL LQ PP L
Sbjct: 192 APERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLP 251
Query: 240 YERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFKH 279
FS F+ V CL KD +KRP KL++H F K
Sbjct: 252 GHMG--FSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKR 289
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 145/312 (46%), Gaps = 52/312 (16%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNV 74
D+ E+G G V++ P ++A K++ LE + I RE+Q + N P +
Sbjct: 69 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 128
Query: 75 LRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLH-FH 133
+ + +F + + + M +M GGS ++K A E ++ + +K L YL H
Sbjct: 129 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKH 186
Query: 134 GHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLH 193
+HRDVK NIL++S G IKL DFGVS + D+ N+FVGT +M+PE +Q H
Sbjct: 187 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-----MANSFVGTRSYMSPERLQGTH 241
Query: 194 GYDFKADIWSFGITALELAHGHAP----------------------------------FS 219
Y ++DIWS G++ +E+A G P S
Sbjct: 242 -YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLS 300
Query: 220 KY-----PPMKV--LLMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLM 272
Y PPM + LL + N PP FS F++ V CL+K+P +R ++LM
Sbjct: 301 SYGMDSRPPMAIFELLDYIVNEPP--PKLPSAVFSLEFQDFVNKCLIKNPAERADLKQLM 358
Query: 273 KHHFFKHARSND 284
H F K + + +
Sbjct: 359 VHAFIKRSDAEE 370
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 144/287 (50%), Gaps = 26/287 (9%)
Query: 6 EKRFPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVL-------DLEKCNNDLDG 58
E+ + A+D + E+G G +V + + P +I+A+K + + ++ DLD
Sbjct: 14 EQHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDV 73
Query: 59 IRREVQTMRVTNHPNVLRAHCS-FTTGHCLWVVMPYMAGG--SCLHIMKSAYPEGFEEPV 115
+ MR ++ P +++ + + F G C W+ M M+ + S + E +
Sbjct: 74 V------MRSSDCPYIVQFYGALFREGDC-WICMELMSTSFDKFYKYVYSVLDDVIPEEI 126
Query: 116 IATLLRETLKALVYLHFHGHI-HRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSR 174
+ + T+KAL +L + I HRD+K NIL+D +G IKL DFG+S + D+ + R
Sbjct: 127 LGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRD- 185
Query: 175 NTFVGTPCWMAPEVMQ---QLHGYDFKADIWSFGITALELAHGHAPFSKYPPM-KVLLMT 230
G +MAPE + GYD ++D+WS GIT ELA G P+ K+ + L
Sbjct: 186 ---AGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQV 242
Query: 231 LQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFF 277
++ PP L ++ FS SF V CL KD KRP ++L+KH F
Sbjct: 243 VKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFI 289
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 146/312 (46%), Gaps = 52/312 (16%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNV 74
D+ E+G G V++ P ++A K++ LE + I RE+Q + N P +
Sbjct: 34 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 93
Query: 75 LRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLH-FH 133
+ + +F + + + M +M GGS ++K A E ++ + +K L YL H
Sbjct: 94 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKH 151
Query: 134 GHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLH 193
+HRDVK NIL++S G IKL DFGVS + D+ N+FVGT +M+PE +Q H
Sbjct: 152 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-----MANSFVGTRSYMSPERLQGTH 206
Query: 194 GYDFKADIWSFGITALELAHGHAP----------------------------------FS 219
Y ++DIWS G++ +E+A G P +
Sbjct: 207 -YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLN 265
Query: 220 KY-----PPMKV--LLMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLM 272
K+ PPM + LL + N PP FS F++ V CL+K+P +R ++LM
Sbjct: 266 KFGMDSRPPMAIFELLDYIVNEPP--PKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLM 323
Query: 273 KHHFFKHARSND 284
H F K + + +
Sbjct: 324 VHAFIKRSDAEE 335
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 145/312 (46%), Gaps = 52/312 (16%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNV 74
D+ E+G G V++ P ++A K++ LE + I RE+Q + N P +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 75 LRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLH-FH 133
+ + +F + + + M +M GGS ++K A E ++ + +K L YL H
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKH 124
Query: 134 GHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLH 193
+HRDVK NIL++S G IKL DFGVS + D+ N+FVGT +M+PE +Q H
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-----MANSFVGTRSYMSPERLQGTH 179
Query: 194 GYDFKADIWSFGITALELAHGHAP----------------------------------FS 219
Y ++DIWS G++ +E+A G P S
Sbjct: 180 -YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLS 238
Query: 220 KY-----PPMKV--LLMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLM 272
Y PPM + LL + N PP FS F++ V CL+K+P +R ++LM
Sbjct: 239 SYGMDSRPPMAIFELLDYIVNEPP--PKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLM 296
Query: 273 KHHFFKHARSND 284
H F K + + +
Sbjct: 297 VHAFIKRSDAEE 308
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 145/312 (46%), Gaps = 52/312 (16%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNV 74
D+ E+G G V++ P ++A K++ LE + I RE+Q + N P +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 75 LRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLH-FH 133
+ + +F + + + M +M GGS ++K A E ++ + +K L YL H
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKH 124
Query: 134 GHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLH 193
+HRDVK NIL++S G IKL DFGVS + D+ N+FVGT +M+PE +Q H
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-----MANSFVGTRSYMSPERLQGTH 179
Query: 194 GYDFKADIWSFGITALELAHGHAP----------------------------------FS 219
Y ++DIWS G++ +E+A G P S
Sbjct: 180 -YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLS 238
Query: 220 KY-----PPMKV--LLMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLM 272
Y PPM + LL + N PP FS F++ V CL+K+P +R ++LM
Sbjct: 239 SYGMDSRPPMAIFELLDYIVNEPP--PKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLM 296
Query: 273 KHHFFKHARSND 284
H F K + + +
Sbjct: 297 VHAFIKRSDAEE 308
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 145/312 (46%), Gaps = 52/312 (16%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNV 74
D+ E+G G V++ P ++A K++ LE + I RE+Q + N P +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 75 LRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLH-FH 133
+ + +F + + + M +M GGS ++K A E ++ + +K L YL H
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKH 124
Query: 134 GHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLH 193
+HRDVK NIL++S G IKL DFGVS + D+ N+FVGT +M+PE +Q H
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-----MANSFVGTRSYMSPERLQGTH 179
Query: 194 GYDFKADIWSFGITALELAHGHAP----------------------------------FS 219
Y ++DIWS G++ +E+A G P S
Sbjct: 180 -YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLS 238
Query: 220 KY-----PPMKV--LLMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLM 272
Y PPM + LL + N PP FS F++ V CL+K+P +R ++LM
Sbjct: 239 SYGMDSRPPMAIFELLDYIVNEPP--PKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLM 296
Query: 273 KHHFFKHARSND 284
H F K + + +
Sbjct: 297 VHAFIKRSDAEE 308
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 145/312 (46%), Gaps = 52/312 (16%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNV 74
D+ E+G G V++ P ++A K++ LE + I RE+Q + N P +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 75 LRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLH-FH 133
+ + +F + + + M +M GGS ++K A E ++ + +K L YL H
Sbjct: 67 VGFYGAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKH 124
Query: 134 GHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLH 193
+HRDVK NIL++S G IKL DFGVS + D+ N+FVGT +M+PE +Q H
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-----MANSFVGTRSYMSPERLQGTH 179
Query: 194 GYDFKADIWSFGITALELAHGHAP----------------------------------FS 219
Y ++DIWS G++ +E+A G P S
Sbjct: 180 -YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLS 238
Query: 220 KY-----PPMKV--LLMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLM 272
Y PPM + LL + N PP FS F++ V CL+K+P +R ++LM
Sbjct: 239 SYGMDSRPPMAIFELLDYIVNEPP--PKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLM 296
Query: 273 KHHFFKHARSND 284
H F K + + +
Sbjct: 297 VHAFIKRSDAEE 308
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 139/312 (44%), Gaps = 56/312 (17%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNV 74
D+ E+G G V + P I+A K++ LE + I RE+Q + N P +
Sbjct: 17 DFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 76
Query: 75 LRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLH-FH 133
+ + +F + + + M +M GGS ++K A + E ++ + L+ L YL H
Sbjct: 77 VGFYGAFYSDGEISICMEHMDGGSLDQVLKEA--KRIPEEILGKVSIAVLRGLAYLREKH 134
Query: 134 GHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLH 193
+HRDVK NIL++S G IKL DFGVS + D+ N+FVGT +MAPE +Q H
Sbjct: 135 QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-----MANSFVGTRSYMAPERLQGTH 189
Query: 194 GYDFKADIWSFGITALELAHGHAPF----------------------------------- 218
Y ++DIWS G++ +ELA G P
Sbjct: 190 -YSVQSDIWSMGLSLVELAVGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPG 248
Query: 219 --------SKYPPMKV--LLMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTA 268
P M + LL + N PP + F+ F+E V CL+K+P +R
Sbjct: 249 RPVSGHGMDSRPAMAIFELLDYIVNEPP--PKLPNGVFTPDFQEFVNKCLIKNPAERADL 306
Query: 269 EKLMKHHFFKHA 280
+ L H F K +
Sbjct: 307 KMLTNHTFIKRS 318
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 135/270 (50%), Gaps = 20/270 (7%)
Query: 22 VGEGVSATVYRALCIPLNEIVAIKVLDL-------EKCNNDLDGIRREVQTMR-VTNHPN 73
+G GVS+ V R + A+K++++ E+ + RRE +R V HP+
Sbjct: 102 IGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPH 161
Query: 74 VLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFH 133
++ S+ + +++V M G + E +++R L+A+ +LH +
Sbjct: 162 IITLIDSYESSSFMFLVFDLMRKGELFDYLTEKV--ALSEKETRSIMRSLLEAVSFLHAN 219
Query: 134 GHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEV----M 189
+HRD+K NIL+D N I+L+DFG S C + G++ R GTP ++APE+ M
Sbjct: 220 NIVHRDLKPENILLDDNMQIRLSDFGFS-CHLEPGEKLRE---LCGTPGYLAPEILKCSM 275
Query: 190 QQLH-GYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSK 248
+ H GY + D+W+ G+ L G PF + +L M ++ E D R S
Sbjct: 276 DETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDR-SS 334
Query: 249 SFKELVTACLVKDPKKRPTAEKLMKHHFFK 278
+ K+L++ L DP+ R TAE+ ++H FF+
Sbjct: 335 TVKDLISRLLQVDPEARLTAEQALQHPFFE 364
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 137/284 (48%), Gaps = 29/284 (10%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDL--------EKCNNDLDGIRREVQT 65
++Y E +G GVS+ V R + P + A+K++D+ E+ + +EV
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 66 MR-VTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETL 124
+R V+ HPN+++ ++ T ++V M G + E ++R L
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT--LSEKETRKIMRALL 134
Query: 125 KALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWM 184
+ + LH +HRD+K NIL+D + IKL DFG S C D G++ RS GTP ++
Sbjct: 135 EVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFS-CQLDPGEKLRS---VCGTPSYL 190
Query: 185 APEV----MQQLH-GYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTL----QNAP 235
APE+ M H GY + D+WS G+ L G PF M +L M + Q
Sbjct: 191 APEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGS 250
Query: 236 PGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFKH 279
P D +S + K+LV+ LV P+KR TAE+ + H FF+
Sbjct: 251 PEWD-----DYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 289
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 136/284 (47%), Gaps = 29/284 (10%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDL--------EKCNNDLDGIRREVQT 65
++Y E +G GVS+ V R + P + A+K++D+ E+ + +EV
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 66 MR-VTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETL 124
+R V+ HPN+++ ++ T ++V M G + E ++R L
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT--LSEKETRKIMRALL 134
Query: 125 KALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWM 184
+ + LH +HRD+K NIL+D + IKL DFG S C D G++ R GTP ++
Sbjct: 135 EVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFS-CQLDPGEKLRE---VCGTPSYL 190
Query: 185 APEV----MQQLH-GYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTL----QNAP 235
APE+ M H GY + D+WS G+ L G PF M +L M + Q
Sbjct: 191 APEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGS 250
Query: 236 PGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFKH 279
P D +S + K+LV+ LV P+KR TAE+ + H FF+
Sbjct: 251 PEWD-----DYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 289
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 136/284 (47%), Gaps = 29/284 (10%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDL--------EKCNNDLDGIRREVQT 65
++Y E +G GVS+ V R + P + A+K++D+ E+ + +EV
Sbjct: 4 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 63
Query: 66 MR-VTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETL 124
+R V+ HPN+++ ++ T ++V M G + E ++R L
Sbjct: 64 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT--LSEKETRKIMRALL 121
Query: 125 KALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWM 184
+ + LH +HRD+K NIL+D + IKL DFG S C D G++ R GTP ++
Sbjct: 122 EVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFS-CQLDPGEKLRE---VCGTPSYL 177
Query: 185 APEV----MQQLH-GYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTL----QNAP 235
APE+ M H GY + D+WS G+ L G PF M +L M + Q
Sbjct: 178 APEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGS 237
Query: 236 PGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFKH 279
P D +S + K+LV+ LV P+KR TAE+ + H FF+
Sbjct: 238 PEWD-----DYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 276
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 137/273 (50%), Gaps = 12/273 (4%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNND-LDGIRREVQTMRVTNHPN 73
+YRL + +G+G A V A I + VA+K++D + N+ L + REV+ M+V NHPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 74 VLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFH 133
+++ T L++VM Y +GG + A+ E+ A R+ + A+ Y H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYL-VAHGRMKEKEARAKF-RQIVSAVQYCHQK 132
Query: 134 GHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLH 193
+HRD+KA N+L+D++ IK+ADFG S F G++ +TF G+P + APE+ Q
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSN-EFTFGNKL---DTFCGSPPYAAPELFQGKK 188
Query: 194 GYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKEL 253
+ D+WS G+ L G PF ++ L+ Y S + L
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK-----YRIPFYMSTDCENL 243
Query: 254 VTACLVKDPKKRPTAEKLMKHHFFKHARSNDFL 286
+ L+ +P KR T E++MK + +D L
Sbjct: 244 LKKFLILNPSKRGTLEQIMKDRWMNVGHEDDEL 276
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 137/273 (50%), Gaps = 12/273 (4%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNND-LDGIRREVQTMRVTNHPN 73
+YRL + +G+G A V A I + VA+K++D + N+ L + REV+ M+V NHPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 74 VLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFH 133
+++ T L++VM Y +GG + A+ E+ A R+ + A+ Y H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYL-VAHGRMKEKEARAKF-RQIVSAVQYCHQK 132
Query: 134 GHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLH 193
+HRD+KA N+L+D++ IK+ADFG S F G++ +TF G+P + APE+ Q
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSN-EFTFGNKL---DTFCGSPPYAAPELFQGKK 188
Query: 194 GYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKEL 253
+ D+WS G+ L G PF ++ L+ Y S + L
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK-----YRIPFYMSTDCENL 243
Query: 254 VTACLVKDPKKRPTAEKLMKHHFFKHARSNDFL 286
+ L+ +P KR T E++MK + +D L
Sbjct: 244 LKKFLILNPSKRGTLEQIMKDRWMNVGHEDDEL 276
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 132/273 (48%), Gaps = 12/273 (4%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCN-NDLDGIRREVQTMRVTNHPN 73
+YRL + +G+G A V A I VAIK++D + N L + REV+ M++ NHPN
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 72
Query: 74 VLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFH 133
+++ T L+++M Y +GG + + +E + R+ + A+ Y H
Sbjct: 73 IVKLFEVIETEKTLYLIMEYASGGEVFDYLVAH--GRMKEKEARSKFRQIVSAVQYCHQK 130
Query: 134 GHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLH 193
+HRD+KA N+L+D++ IK+ADFG S F G + +TF G+P + APE+ Q
Sbjct: 131 RIVHRDLKAENLLLDADMNIKIADFGFSN-EFTVGGKL---DTFCGSPPYAAPELFQGKK 186
Query: 194 GYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKEL 253
+ D+WS G+ L G PF ++ L+ Y S + L
Sbjct: 187 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK-----YRIPFYMSTDCENL 241
Query: 254 VTACLVKDPKKRPTAEKLMKHHFFKHARSNDFL 286
+ LV +P KR T E++MK + D L
Sbjct: 242 LKRFLVLNPIKRGTLEQIMKDRWINAGHEEDEL 274
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/273 (30%), Positives = 137/273 (50%), Gaps = 12/273 (4%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNND-LDGIRREVQTMRVTNHPN 73
+YRL + +G+G A V A I + VA++++D + N+ L + REV+ M+V NHPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 74 VLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFH 133
+++ T L++VM Y +GG + A+ E+ A R+ + A+ Y H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYL-VAHGRMKEKEARAKF-RQIVSAVQYCHQK 132
Query: 134 GHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLH 193
+HRD+KA N+L+D++ IK+ADFG S F G++ +TF G+P + APE+ Q
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSN-EFTFGNKL---DTFCGSPPYAAPELFQGKK 188
Query: 194 GYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKEL 253
+ D+WS G+ L G PF ++ L+ Y S + L
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK-----YRIPFYMSTDCENL 243
Query: 254 VTACLVKDPKKRPTAEKLMKHHFFKHARSNDFL 286
+ L+ +P KR T E++MK + +D L
Sbjct: 244 LKKFLILNPSKRGTLEQIMKDRWMNVGHEDDEL 276
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 134/271 (49%), Gaps = 12/271 (4%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNND-LDGIRREVQTMRVTNHPN 73
+YRL + +G+G A V A I + VA+K++D + N+ L + REV+ M+V NHPN
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 67
Query: 74 VLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFH 133
+++ T L++VM Y +GG + + +E R+ + A+ Y H
Sbjct: 68 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH--GWMKEKEARAKFRQIVSAVQYCHQK 125
Query: 134 GHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLH 193
+HRD+KA N+L+D++ IK+ADFG S F G++ +TF G+P + APE+ Q
Sbjct: 126 FIVHRDLKAENLLLDADMNIKIADFGFSN-EFTFGNKL---DTFCGSPPYAAPELFQGKK 181
Query: 194 GYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKEL 253
+ D+WS G+ L G PF ++ L+ Y S + L
Sbjct: 182 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK-----YRIPFYMSTDCENL 236
Query: 254 VTACLVKDPKKRPTAEKLMKHHFFKHARSND 284
+ L+ +P KR T E++MK + +D
Sbjct: 237 LKKFLILNPSKRGTLEQIMKDRWMNVGHEDD 267
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 130/259 (50%), Gaps = 15/259 (5%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIK---VLDLEKCNNDLDGIRREVQTMRVTNH 71
++R+ +++G G + VYRA C+ VA+K + DL D I+ E+ ++ NH
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIK-EIDLLKQLNH 91
Query: 72 PNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEG--FEEPVIATLLRETLKALVY 129
PNV++ + SF + L +V+ G ++K + E + + AL +
Sbjct: 92 PNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEH 151
Query: 130 LHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVM 189
+H +HRD+K N+ I + G +KL D G+ + + ++ VGTP +M+PE +
Sbjct: 152 MHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFF---SSKTTAAHSLVGTPYYMSPERI 208
Query: 190 QQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYE--RDKRFS 247
+ +GY+FK+DIWS G E+A +PF K+ L +L DY +S
Sbjct: 209 HE-NGYNFKSDIWSLGCLLYEMAALQSPFYG---DKMNLYSLCKKIEQCDYPPLPSDHYS 264
Query: 248 KSFKELVTACLVKDPKKRP 266
+ ++LV C+ DP+KRP
Sbjct: 265 EELRQLVNMCINPDPEKRP 283
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 84/273 (30%), Positives = 135/273 (49%), Gaps = 12/273 (4%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNND-LDGIRREVQTMRVTNHPN 73
+YRL + +G+G A V A I + VA+K++D + N+ L + REV+ M+V NHPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 74 VLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFH 133
+++ T L++VM Y +GG + A+ E+ A R+ + A+ Y H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYL-VAHGRMKEKEARAKF-RQIVSAVQYCHQK 132
Query: 134 GHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLH 193
+HRD+KA N+L+D++ IK+ADFG S F G++ + F G P + APE+ Q
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSN-EFTFGNKL---DAFCGAPPYAAPELFQGKK 188
Query: 194 GYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKEL 253
+ D+WS G+ L G PF ++ L+ Y S + L
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK-----YRIPFYMSTDCENL 243
Query: 254 VTACLVKDPKKRPTAEKLMKHHFFKHARSNDFL 286
+ L+ +P KR T E++MK + +D L
Sbjct: 244 LKKFLILNPSKRGTLEQIMKDRWMNVGHEDDEL 276
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 136/273 (49%), Gaps = 12/273 (4%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNND-LDGIRREVQTMRVTNHPN 73
+YRL + +G+G A V A I + VA++++D + N+ L + REV+ M+V NHPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 74 VLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFH 133
+++ T L++VM Y +GG + A+ E+ A R+ + A+ Y H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYL-VAHGRMKEKEARAKF-RQIVSAVQYCHQK 132
Query: 134 GHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLH 193
+HRD+KA N+L+D++ IK+ADFG S F G++ + F G+P + APE+ Q
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSN-EFTFGNKL---DEFCGSPPYAAPELFQGKK 188
Query: 194 GYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKEL 253
+ D+WS G+ L G PF ++ L+ Y S + L
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK-----YRIPFYMSTDCENL 243
Query: 254 VTACLVKDPKKRPTAEKLMKHHFFKHARSNDFL 286
+ L+ +P KR T E++MK + +D L
Sbjct: 244 LKKFLILNPSKRGTLEQIMKDRWMNVGHEDDEL 276
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 130/273 (47%), Gaps = 12/273 (4%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCN-NDLDGIRREVQTMRVTNHPN 73
+YRL + +G+G A V A I VAIK++D + N L + REV+ M++ NHPN
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 74 VLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFH 133
+++ T L+++M Y +GG + + +E + R+ + A+ Y H
Sbjct: 76 IVKLFEVIETEKTLYLIMEYASGGEVFDYLVAH--GRMKEKEARSKFRQIVSAVQYCHQK 133
Query: 134 GHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLH 193
+HRD+KA N+L+D++ IK+ADFG S F G + + F G P + APE+ Q
Sbjct: 134 RIVHRDLKAENLLLDADMNIKIADFGFSN-EFTVGGKL---DAFCGAPPYAAPELFQGKK 189
Query: 194 GYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKEL 253
+ D+WS G+ L G PF ++ L+ Y S + L
Sbjct: 190 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK-----YRIPFYMSTDCENL 244
Query: 254 VTACLVKDPKKRPTAEKLMKHHFFKHARSNDFL 286
+ LV +P KR T E++MK + D L
Sbjct: 245 LKRFLVLNPIKRGTLEQIMKDRWINAGHEEDEL 277
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 125/261 (47%), Gaps = 9/261 (3%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPN 73
K Y L+E +G G A V A I E+VAIK++D +DL I+ E++ ++ H +
Sbjct: 10 KYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQH 69
Query: 74 VLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFH 133
+ + + T + +++V+ Y GG + S + E + R+ + A+ Y+H
Sbjct: 70 ICQLYHVLETANKIFMVLEYCPGGELFDYIISQ--DRLSEEETRVVFRQIVSAVAYVHSQ 127
Query: 134 GHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLH 193
G+ HRD+K N+L D +KL DFG+ C G++ T G+ + APE++Q
Sbjct: 128 GYAHRDLKPENLLFDEYHKLKLIDFGL--CAKPKGNKDYHLQTCCGSLAYAAPELIQGKS 185
Query: 194 GYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKEL 253
+AD+WS GI L G PF M + ++ Y+ K S S L
Sbjct: 186 YLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGK-----YDVPKWLSPSSILL 240
Query: 254 VTACLVKDPKKRPTAEKLMKH 274
+ L DPKKR + + L+ H
Sbjct: 241 LQQMLQVDPKKRISMKNLLNH 261
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 134/279 (48%), Gaps = 16/279 (5%)
Query: 7 KRFPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQ-T 65
+ F V A D E+G G V + +P +I+A+K + + + + ++ +
Sbjct: 44 QNFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDIS 103
Query: 66 MRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEG--FEEPVIATLLRET 123
MR + P + + + +W+ M M S K +G E ++ +
Sbjct: 104 MRTVDCPFTVTFYGALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSI 162
Query: 124 LKALVYLHFH-GHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPC 182
+KAL +LH IHRDVK N+LI++ G +K+ DFG+S + D+ ++ G
Sbjct: 163 VKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDS----VAKTIDAGCKP 218
Query: 183 WMAPEVMQ---QLHGYDFKADIWSFGITALELAHGHAPFSKY-PPMKVLLMTLQNAPPGL 238
+MAPE + GY K+DIWS GIT +ELA P+ + P + L ++ P L
Sbjct: 219 YMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQL 278
Query: 239 DYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFF 277
+ +FS F + + CL K+ K+RPT +LM+H FF
Sbjct: 279 PAD---KFSAEFVDFTSQCLKKNSKERPTYPELMQHPFF 314
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 109/205 (53%), Gaps = 7/205 (3%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCN-NDLDGIRREVQTMRVTNHPN 73
+YRL + +G+G A V A + VA+K++D + N L + REV+ M++ NHPN
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 74 VLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFH 133
+++ T L++VM Y +GG + A+ E+ A R+ + A+ Y H
Sbjct: 76 IVKLFEVIETEKTLYLVMEYASGGEVFDYL-VAHGRMKEKEARAKF-RQIVSAVQYCHQK 133
Query: 134 GHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLH 193
+HRD+KA N+L+D + IK+ADFG S F G++ +TF G+P + APE+ Q
Sbjct: 134 YIVHRDLKAENLLLDGDMNIKIADFGFSN-EFTVGNKL---DTFCGSPPYAAPELFQGKK 189
Query: 194 GYDFKADIWSFGITALELAHGHAPF 218
+ D+WS G+ L G PF
Sbjct: 190 YDGPEVDVWSLGVILYTLVSGSLPF 214
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 136/264 (51%), Gaps = 11/264 (4%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCN-NDLDGIRREVQTMRVTNHPN 73
+Y+L+EE+G+G + V R + IP + A K+++ +K + D + RE + R+ HPN
Sbjct: 5 EYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPN 64
Query: 74 VLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFH 133
++R H S + ++V + GG + + E + E + +++ L+++ + H +
Sbjct: 65 IVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR--EYYSEADASHCIQQILESVNHCHLN 122
Query: 134 GHIHRDVKAGNILIDSN---GAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
G +HRD+K N+L+ S A+KLADFG++ + Q++ F GTP +++PEV++
Sbjct: 123 GIVHRDLKPENLLLASKSKGAAVKLADFGLA---IEVQGDQQAWFGFAGTPGYLSPEVLR 179
Query: 191 QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSF 250
+ Y D+W+ G+ L G+ PF ++ A E D +
Sbjct: 180 K-DPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDT-VTPEA 237
Query: 251 KELVTACLVKDPKKRPTAEKLMKH 274
K+L+ L +P KR TA + +KH
Sbjct: 238 KDLINKMLTINPAKRITASEALKH 261
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 118/224 (52%), Gaps = 20/224 (8%)
Query: 62 EVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGS----CLHIMKSAYPEGFEEPVIA 117
EV +++ +HPN+++ + F ++VM GG +H MK F E A
Sbjct: 86 EVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMK------FNEVDAA 139
Query: 118 TLLRETLKALVYLHFHGHIHRDVKAGNILIDS---NGAIKLADFGVSACMFDAGDRQRSR 174
++++ L + YLH H +HRD+K N+L++S + IK+ DFG+SA +F+ + + R
Sbjct: 140 VIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSA-VFENQKKMKER 198
Query: 175 NTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNA 234
+GT ++APEV+++ YD K D+WS G+ L G+ PF ++ L ++
Sbjct: 199 ---LGTAYYIAPEVLRK--KYDEKCDVWSIGVILFILLAGYPPFGGQTDQEI-LRKVEKG 252
Query: 235 PPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFK 278
D K S+ K+L+ L D ++R +A++ ++H + K
Sbjct: 253 KYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIK 296
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 132/273 (48%), Gaps = 12/273 (4%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNND-LDGIRREVQTMRVTNHPN 73
+YRL + +G+G A V A I + VA+K++D + N+ L + REV+ +V NHPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPN 74
Query: 74 VLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFH 133
+++ T L++V Y +GG + A+ E+ A R+ + A+ Y H
Sbjct: 75 IVKLFEVIETEKTLYLVXEYASGGEVFDYL-VAHGRXKEKEARAKF-RQIVSAVQYCHQK 132
Query: 134 GHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLH 193
+HRD+KA N+L+D++ IK+ADFG S F G++ + F G P + APE+ Q
Sbjct: 133 FIVHRDLKAENLLLDADXNIKIADFGFSN-EFTFGNKL---DAFCGAPPYAAPELFQGKK 188
Query: 194 GYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKEL 253
+ D+WS G+ L G PF ++ L+ Y S + L
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK-----YRIPFYXSTDCENL 243
Query: 254 VTACLVKDPKKRPTAEKLMKHHFFKHARSNDFL 286
+ L+ +P KR T E++ K + +D L
Sbjct: 244 LKKFLILNPSKRGTLEQIXKDRWXNVGHEDDEL 276
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 123/244 (50%), Gaps = 15/244 (6%)
Query: 43 AIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHI 102
IK ++ ++ ++ I E++ ++ +HPN+++ F H +++VM GG L
Sbjct: 51 VIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLER 110
Query: 103 MKSAYPEG--FEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDS---NGAIKLAD 157
+ SA G E +A L+++ + AL Y H +H+D+K NIL + IK+ D
Sbjct: 111 IVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIID 170
Query: 158 FGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAP 217
FG+ A +F + + S N GT +MAPEV ++ FK DIWS G+ L G P
Sbjct: 171 FGL-AELFKSDE--HSTNA-AGTALYMAPEVFKR--DVTFKCDIWSAGVVMYFLLTGCLP 224
Query: 218 FSKYPPMKVLLMTLQNAPPGLDYERDKR-FSKSFKELVTACLVKDPKKRPTAEKLMKHHF 276
F+ +V P +Y + R + +L+ L KDP++RP+A +++ H +
Sbjct: 225 FTGTSLEEVQQKATYKEP---NYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHHEW 281
Query: 277 FKHA 280
FK A
Sbjct: 282 FKQA 285
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 132/275 (48%), Gaps = 16/275 (5%)
Query: 11 VDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQ-TMRVT 69
V A D E+G G V + +P +I+A+K + + + + ++ +MR
Sbjct: 4 VKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTV 63
Query: 70 NHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEG--FEEPVIATLLRETLKAL 127
+ P + + + +W+ M M S K +G E ++ + +KAL
Sbjct: 64 DCPFTVTFYGALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKAL 122
Query: 128 VYLHFH-GHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAP 186
+LH IHRDVK N+LI++ G +K+ DFG+S + D +++ G +MAP
Sbjct: 123 EHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVD----DVAKDIDAGCKPYMAP 178
Query: 187 EVMQ---QLHGYDFKADIWSFGITALELAHGHAPFSKY-PPMKVLLMTLQNAPPGLDYER 242
E + GY K+DIWS GIT +ELA P+ + P + L ++ P L +
Sbjct: 179 ERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPAD- 237
Query: 243 DKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFF 277
+FS F + + CL K+ K+RPT +LM+H FF
Sbjct: 238 --KFSAEFVDFTSQCLKKNSKERPTYPELMQHPFF 270
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 137/273 (50%), Gaps = 17/273 (6%)
Query: 16 YRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNND----LDGIRREVQTMRVTNH 71
Y L E +G+G + V R + + A+K++D+ K + + ++RE + H
Sbjct: 26 YELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 72 PNVLRAHCSFTTGHCLWVVMPYMAGGS-CLHIMKSAYPEGF--EEPVIATLLRETLKALV 128
P+++ ++++ L++V +M G C I+K A GF E V + +R+ L+AL
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRA-DAGFVYSEAVASHYMRQILEALR 144
Query: 129 YLHFHGHIHRDVKAGNILIDS---NGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
Y H + IHRDVK N+L+ S + +KL DFGV+ + ++G R VGTP +MA
Sbjct: 145 YCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGR---VGTPHFMA 201
Query: 186 PEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKR 245
PEV+++ Y D+W G+ L G PF Y + L + ++ +
Sbjct: 202 PEVVKR-EPYGKPVDVWGCGVILFILLSGCLPF--YGTKERLFEGIIKGKYKMNPRQWSH 258
Query: 246 FSKSFKELVTACLVKDPKKRPTAEKLMKHHFFK 278
S+S K+LV L+ DP +R T + + H + K
Sbjct: 259 ISESAKDLVRRMLMLDPAERITVYEALNHPWLK 291
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 132/268 (49%), Gaps = 14/268 (5%)
Query: 11 VDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVL--DLEKCNNDLDGIRREVQTMRV 68
+ +D+ L++ +G+G V+ A N+ AIK L D+ ++D++ E + + +
Sbjct: 15 LKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSL 74
Query: 69 T-NHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKAL 127
HP + C+F T L+ VM Y+ GG ++ ++S + F+ E + L
Sbjct: 75 AWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCH--KFDLSRATFYAAEIILGL 132
Query: 128 VYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPE 187
+LH G ++RD+K NIL+D +G IK+ADFG+ GD + N F GTP ++APE
Sbjct: 133 QFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENM-LGDAK--TNEFCGTPDYIAPE 189
Query: 188 VMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFS 247
++ Y+ D WSFG+ E+ G +PF ++ + P Y R
Sbjct: 190 ILLG-QKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPF---YPR--WLE 243
Query: 248 KSFKELVTACLVKDPKKRPTAEKLMKHH 275
K K+L+ V++P+KR ++ H
Sbjct: 244 KEAKDLLVKLFVREPEKRLGVRGDIRQH 271
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 136/264 (51%), Gaps = 11/264 (4%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCN-NDLDGIRREVQTMRVTNHPN 73
+Y+L+EE+G+G + V R + IP + A K+++ +K + D + RE + R+ HPN
Sbjct: 5 EYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPN 64
Query: 74 VLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFH 133
++R H S + ++V + GG + + E + E + +++ L+++ + H +
Sbjct: 65 IVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR--EYYSEADASHCIQQILESVNHCHLN 122
Query: 134 GHIHRDVKAGNILIDSN---GAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
G +HRD+K N+L+ S A+KLADFG++ + Q++ F GTP +++PEV++
Sbjct: 123 GIVHRDLKPENLLLASKSKGAAVKLADFGLA---IEVQGDQQAWFGFAGTPGYLSPEVLR 179
Query: 191 QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSF 250
+ Y D+W+ G+ L G+ PF ++ A E D +
Sbjct: 180 K-DPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDT-VTPEA 237
Query: 251 KELVTACLVKDPKKRPTAEKLMKH 274
K+L+ L +P KR TA + +KH
Sbjct: 238 KDLINKMLTINPAKRITASEALKH 261
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 131/265 (49%), Gaps = 14/265 (5%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVL--DLEKCNNDLDGIRREVQTMRVT-N 70
+D+ L++ +G+G V+ A N+ AIK L D+ ++D++ E + + +
Sbjct: 17 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE 76
Query: 71 HPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYL 130
HP + C+F T L+ VM Y+ GG ++ ++S + F+ E + L +L
Sbjct: 77 HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCH--KFDLSRATFYAAEIILGLQFL 134
Query: 131 HFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
H G ++RD+K NIL+D +G IK+ADFG+ GD + N F GTP ++APE++
Sbjct: 135 HSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENM-LGDAK--TNXFCGTPDYIAPEILL 191
Query: 191 QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSF 250
Y+ D WSFG+ E+ G +PF ++ + P Y R K
Sbjct: 192 G-QKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPF---YPR--WLEKEA 245
Query: 251 KELVTACLVKDPKKRPTAEKLMKHH 275
K+L+ V++P+KR ++ H
Sbjct: 246 KDLLVKLFVREPEKRLGVRGDIRQH 270
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 110/208 (52%), Gaps = 3/208 (1%)
Query: 13 AKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHP 72
+D+ L + +GEG V A+ E VA+K++D+++ + + I++E+ ++ NH
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 73 NVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHF 132
NV++ + G+ ++ + Y +GG ++ G EP + + +VYLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHG 122
Query: 133 HGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQL 192
G HRD+K N+L+D +K++DFG+ A +F +R+R N GT ++APE++++
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGL-ATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 193 HGYDFKADIWSFGITALELAHGHAPFSK 220
+ D+WS GI + G P+ +
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 133/272 (48%), Gaps = 19/272 (6%)
Query: 13 AKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHP 72
+D+ L + +GEG V A+ E VA+K++D+++ + + I++E+ ++ NH
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 73 NVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHF 132
NV++ + G+ ++ + Y +GG ++ G EP + + +VYLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHG 123
Query: 133 HGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQL 192
G HRD+K N+L+D +K++DFG+ A +F +R+R N GT ++APE++++
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGL-ATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 193 HGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKE 252
+ D+WS GI + G P+ + + D++ K + +K+
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQ---------PSDSCQEYSDWKEKKTYLNPWKK 233
Query: 253 LVTA-------CLVKDPKKRPTAEKLMKHHFF 277
+ +A LV++P R T + K ++
Sbjct: 234 IDSAPLALLHKILVENPSARITIPDIKKDRWY 265
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 133/272 (48%), Gaps = 19/272 (6%)
Query: 13 AKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHP 72
+D+ L + +GEG V A+ E VA+K++D+++ + + I++E+ ++ NH
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 73 NVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHF 132
NV++ + G+ ++ + Y +GG ++ G EP + + +VYLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHG 122
Query: 133 HGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQL 192
G HRD+K N+L+D +K++DFG+ A +F +R+R N GT ++APE++++
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGL-ATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 193 HGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKE 252
+ D+WS GI + G P+ + + D++ K + +K+
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQ---------PSDSCQEYSDWKEKKTYLNPWKK 232
Query: 253 LVTA-------CLVKDPKKRPTAEKLMKHHFF 277
+ +A LV++P R T + K ++
Sbjct: 233 IDSAPLALLHKILVENPSARITIPDIKKDRWY 264
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 110/208 (52%), Gaps = 3/208 (1%)
Query: 13 AKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHP 72
+D+ L + +GEG V A+ E VA+K++D+++ + + I++E+ ++ NH
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 73 NVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHF 132
NV++ + G+ ++ + Y +GG ++ G EP + + +VYLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHG 122
Query: 133 HGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQL 192
G HRD+K N+L+D +K++DFG+ A +F +R+R N GT ++APE++++
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGL-ATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 193 HGYDFKADIWSFGITALELAHGHAPFSK 220
+ D+WS GI + G P+ +
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 110/208 (52%), Gaps = 3/208 (1%)
Query: 13 AKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHP 72
+D+ L + +GEG V A+ E VA+K++D+++ + + I++E+ ++ NH
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 65
Query: 73 NVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHF 132
NV++ + G+ ++ + Y +GG ++ G EP + + +VYLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHG 123
Query: 133 HGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQL 192
G HRD+K N+L+D +K++DFG+ A +F +R+R N GT ++APE++++
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGL-ATVFRYNNRERLLNKMXGTLPYVAPELLKRR 182
Query: 193 HGYDFKADIWSFGITALELAHGHAPFSK 220
+ D+WS GI + G P+ +
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 107/214 (50%), Gaps = 13/214 (6%)
Query: 10 PVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNND--LDGIRREVQTM- 66
P+ +D+ L +G G A V + I A+KV+ E N+D +D ++ E
Sbjct: 5 PLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFE 64
Query: 67 RVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKS--AYPEGFEEPVIATLLRETL 124
+ +NHP ++ H F T L+ V+ Y+ GG + M+ PE A E
Sbjct: 65 QASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA----EIS 120
Query: 125 KALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWM 184
AL YLH G I+RD+K N+L+DS G IKL D+G+ GD + + F GTP ++
Sbjct: 121 LALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD---TTSXFCGTPNYI 177
Query: 185 APEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
APE+++ Y F D W+ G+ E+ G +PF
Sbjct: 178 APEILRG-EDYGFSVDWWALGVLMFEMMAGRSPF 210
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 111/208 (53%), Gaps = 3/208 (1%)
Query: 13 AKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHP 72
+D+ L + +GEG + V A+ E VA+K++D+++ + + I++E+ ++ NH
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 73 NVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHF 132
NV++ + G+ ++ + Y +GG ++ G EP + + +VYLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHG 122
Query: 133 HGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQL 192
G HRD+K N+L+D +K++DFG+ A +F +R+R N GT ++APE++++
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGL-ATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 193 HGYDFKADIWSFGITALELAHGHAPFSK 220
+ D+WS GI + G P+ +
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/281 (30%), Positives = 135/281 (48%), Gaps = 19/281 (6%)
Query: 13 AKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKC--NNDLDGIRREVQTMRVTN 70
A+DY + + +G G V ++ A+K+L + +D E M N
Sbjct: 74 AEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN 133
Query: 71 HPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSA-YPEGFEEPVIATLLRETLKALVY 129
P V++ C+F L++VM YM GG +++M + PE + + A E + AL
Sbjct: 134 SPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTA----EVVLALDA 189
Query: 130 LHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVM 189
+H G IHRDVK N+L+D +G +KLADFG M + G +T VGTP +++PEV+
Sbjct: 190 IHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETG--MVHCDTAVGTPDYISPEVL 247
Query: 190 QQLHG---YDFKADIWSFGITALELAHGHAPFSKYPPMKVL--LMTLQNAPPGLDYERDK 244
+ G Y + D WS G+ E+ G PF + +M +N+ L + D
Sbjct: 248 KSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNS---LCFPEDA 304
Query: 245 RFSKSFKELVTACLVKDPKK--RPTAEKLMKHHFFKHARSN 283
SK K L+ A L + R E++ +H FFK+ + N
Sbjct: 305 EISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKNDQWN 345
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 137/293 (46%), Gaps = 18/293 (6%)
Query: 13 AKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKC--NNDLDGIRREVQTMRVTN 70
A+DY + + +G G V ++ A+K+L + +D E M N
Sbjct: 68 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN 127
Query: 71 HPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSA-YPEGFEEPVIATLLRETLKALVY 129
P V++ +F L++VM YM GG +++M + PE + A E + AL
Sbjct: 128 SPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTA----EVVLALDA 183
Query: 130 LHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVM 189
+H G IHRDVK N+L+D +G +KLADFG CM + +T VGTP +++PEV+
Sbjct: 184 IHSMGFIHRDVKPDNMLLDKSGHLKLADFG--TCMKMNKEGMVRCDTAVGTPDYISPEVL 241
Query: 190 QQLHG---YDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRF 246
+ G Y + D WS G+ E+ G PF + + N L + D
Sbjct: 242 KSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA-DSLVGTYSKIMNHKNSLTFPDDNDI 300
Query: 247 SKSFKELVTACLVKDPKK--RPTAEKLMKHHFFKHARSNDFLARSIVDNLAPL 297
SK K L+ A L + R E++ +H FFK+ + + ++ D +AP+
Sbjct: 301 SKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKN---DQWAWETLRDTVAPV 350
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 106/210 (50%), Gaps = 13/210 (6%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNND--LDGIRREVQTM-RVTN 70
+D+ L +G G A V + I A++V+ E N+D +D ++ E + +N
Sbjct: 52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASN 111
Query: 71 HPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKS--AYPEGFEEPVIATLLRETLKALV 128
HP ++ H F T L+ V+ Y+ GG + M+ PE A E AL
Sbjct: 112 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA----EISLALN 167
Query: 129 YLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEV 188
YLH G I+RD+K N+L+DS G IKL D+G+ GD + +TF GTP ++APE+
Sbjct: 168 YLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD---TTSTFCGTPNYIAPEI 224
Query: 189 MQQLHGYDFKADIWSFGITALELAHGHAPF 218
++ Y F D W+ G+ E+ G +PF
Sbjct: 225 LRG-EDYGFSVDWWALGVLMFEMMAGRSPF 253
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 110/208 (52%), Gaps = 3/208 (1%)
Query: 13 AKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHP 72
+D+ L + +GEG V A+ E VA+K++D+++ + + I++E+ ++ NH
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 73 NVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHF 132
NV++ + G+ ++ + Y +GG ++ G EP + + +VYLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHG 122
Query: 133 HGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQL 192
G HRD+K N+L+D +K++DFG+ A +F +R+R N GT ++APE++++
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGL-ATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 193 HGYDFKADIWSFGITALELAHGHAPFSK 220
+ D+WS GI + G P+ +
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 137/293 (46%), Gaps = 18/293 (6%)
Query: 13 AKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKC--NNDLDGIRREVQTMRVTN 70
A+DY + + +G G V ++ A+K+L + +D E M N
Sbjct: 73 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN 132
Query: 71 HPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSA-YPEGFEEPVIATLLRETLKALVY 129
P V++ +F L++VM YM GG +++M + PE + A E + AL
Sbjct: 133 SPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTA----EVVLALDA 188
Query: 130 LHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVM 189
+H G IHRDVK N+L+D +G +KLADFG CM + +T VGTP +++PEV+
Sbjct: 189 IHSMGFIHRDVKPDNMLLDKSGHLKLADFG--TCMKMNKEGMVRCDTAVGTPDYISPEVL 246
Query: 190 QQLHG---YDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRF 246
+ G Y + D WS G+ E+ G PF + + N L + D
Sbjct: 247 KSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA-DSLVGTYSKIMNHKNSLTFPDDNDI 305
Query: 247 SKSFKELVTACLVKDPKK--RPTAEKLMKHHFFKHARSNDFLARSIVDNLAPL 297
SK K L+ A L + R E++ +H FFK+ + + ++ D +AP+
Sbjct: 306 SKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKN---DQWAWETLRDTVAPV 355
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 137/293 (46%), Gaps = 18/293 (6%)
Query: 13 AKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKC--NNDLDGIRREVQTMRVTN 70
A+DY + + +G G V ++ A+K+L + +D E M N
Sbjct: 73 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN 132
Query: 71 HPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSA-YPEGFEEPVIATLLRETLKALVY 129
P V++ +F L++VM YM GG +++M + PE + A E + AL
Sbjct: 133 SPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTA----EVVLALDA 188
Query: 130 LHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVM 189
+H G IHRDVK N+L+D +G +KLADFG CM + +T VGTP +++PEV+
Sbjct: 189 IHSMGFIHRDVKPDNMLLDKSGHLKLADFG--TCMKMNKEGMVRCDTAVGTPDYISPEVL 246
Query: 190 QQLHG---YDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRF 246
+ G Y + D WS G+ E+ G PF + + N L + D
Sbjct: 247 KSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA-DSLVGTYSKIMNHKNSLTFPDDNDI 305
Query: 247 SKSFKELVTACLVKDPKK--RPTAEKLMKHHFFKHARSNDFLARSIVDNLAPL 297
SK K L+ A L + R E++ +H FFK+ + + ++ D +AP+
Sbjct: 306 SKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKN---DQWAWETLRDTVAPV 355
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 133/272 (48%), Gaps = 19/272 (6%)
Query: 13 AKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHP 72
+D+ L + +GEG V A+ E VA+K++D+++ + + I++E+ ++ NH
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 73 NVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHF 132
NV++ + G+ ++ + Y +GG ++ G EP + + +VYLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHG 123
Query: 133 HGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQL 192
G HRD+K N+L+D +K++DFG+ A +F +R+R N GT ++APE++++
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGL-ATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 193 HGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKE 252
+ D+WS GI + G P+ + + D++ K + +K+
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQ---------PSDSCQEYSDWKEKKTYLNPWKK 233
Query: 253 LVTA-------CLVKDPKKRPTAEKLMKHHFF 277
+ +A LV++P R T + K ++
Sbjct: 234 IDSAPLALLHKILVENPSARITIPDIKKDRWY 265
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 133/272 (48%), Gaps = 19/272 (6%)
Query: 13 AKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHP 72
+D+ L + +GEG V A+ E VA+K++D+++ + + I++E+ ++ NH
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 73 NVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHF 132
NV++ + G+ ++ + Y +GG ++ G EP + + +VYLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHG 123
Query: 133 HGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQL 192
G HRD+K N+L+D +K++DFG+ A +F +R+R N GT ++APE++++
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGL-ATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 193 HGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKE 252
+ D+WS GI + G P+ + + D++ K + +K+
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQ---------PSDSCQEYSDWKEKKTYLNPWKK 233
Query: 253 LVTA-------CLVKDPKKRPTAEKLMKHHFF 277
+ +A LV++P R T + K ++
Sbjct: 234 IDSAPLALLHKILVENPSARITIPDIKKDRWY 265
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 133/272 (48%), Gaps = 19/272 (6%)
Query: 13 AKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHP 72
+D+ L + +GEG V A+ E VA+K++D+++ + + I++E+ ++ NH
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 73 NVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHF 132
NV++ + G+ ++ + Y +GG ++ G EP + + +VYLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHG 123
Query: 133 HGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQL 192
G HRD+K N+L+D +K++DFG+ A +F +R+R N GT ++APE++++
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGL-ATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 193 HGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKE 252
+ D+WS GI + G P+ + + D++ K + +K+
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQ---------PSDSCQEYSDWKEKKTYLNPWKK 233
Query: 253 LVTA-------CLVKDPKKRPTAEKLMKHHFF 277
+ +A LV++P R T + K ++
Sbjct: 234 IDSAPLALLHKILVENPSARITIPDIKKDRWY 265
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 135/277 (48%), Gaps = 30/277 (10%)
Query: 16 YRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTM-RVTNHPNV 74
Y + E++G G + R + N A+K++D K + E++ + R HPN+
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPT-----EEIEILLRYGQHPNI 78
Query: 75 LRAHCSFTTGHCLWVVMPYMAGGSCL-HIMKSAYPEGFEEPVIATLLRETLKALVYLHFH 133
+ + G ++VV M GG L I++ + F E + +L K + YLH
Sbjct: 79 ITLKDVYDDGKYVYVVTELMKGGELLDKILRQKF---FSEREASAVLFTITKTVEYLHAQ 135
Query: 134 GHIHRDVKAGNIL-IDSNG---AIKLADFGVSACMFDAGDRQRSRNTFVGTPCW----MA 185
G +HRD+K NIL +D +G +I++ DFG + + R+ N + TPC+ +A
Sbjct: 136 GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL-------RAENGLLMTPCYTANFVA 188
Query: 186 PEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYP---PMKVLLMTLQNAPPGLDYER 242
PEV+++ GYD DIWS G+ + G+ PF+ P P ++ L + + L
Sbjct: 189 PEVLER-QGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEI-LARIGSGKFSLSGGY 246
Query: 243 DKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFKH 279
S + K+LV+ L DP +R TA +++H + H
Sbjct: 247 WNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVH 283
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 110/208 (52%), Gaps = 3/208 (1%)
Query: 13 AKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHP 72
+D+ L + +GEG V A+ E VA+K++D+++ + + I++E+ ++ NH
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 63
Query: 73 NVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHF 132
NV++ + G+ ++ + Y +GG ++ G EP + + +VYLH
Sbjct: 64 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHG 121
Query: 133 HGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQL 192
G HRD+K N+L+D +K++DFG+ A +F +R+R N GT ++APE++++
Sbjct: 122 IGITHRDIKPENLLLDERDNLKISDFGL-ATVFRYNNRERLLNKMCGTLPYVAPELLKRR 180
Query: 193 HGYDFKADIWSFGITALELAHGHAPFSK 220
+ D+WS GI + G P+ +
Sbjct: 181 EFHAEPVDVWSCGIVLTAMLAGELPWDQ 208
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 113/228 (49%), Gaps = 12/228 (5%)
Query: 59 IRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIAT 118
I E+ ++ +HPN+++ F ++V + GG + + + F+E A
Sbjct: 93 IYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHK--FDECDAAN 150
Query: 119 LLRETLKALVYLHFHGHIHRDVKAGNILIDSNGA---IKLADFGVSACMFDAGDRQRSRN 175
++++ L + YLH H +HRD+K NIL+++ + IK+ DFG+S+ F + R R
Sbjct: 151 IMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSS-FFSKDYKLRDR- 208
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAP 235
+GT ++APEV+++ Y+ K D+WS G+ L G+ PF + + ++
Sbjct: 209 --LGTAYYIAPEVLKK--KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDI-IKKVEKGK 263
Query: 236 PGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFKHARSN 283
D+ K S KEL+ L D KR TAE+ + + K +N
Sbjct: 264 YYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYANN 311
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 110/208 (52%), Gaps = 3/208 (1%)
Query: 13 AKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHP 72
+D+ L + +GEG V A+ E VA+K++D+++ + + I++E+ ++ NH
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 73 NVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHF 132
NV++ + G+ ++ + Y +GG ++ G EP + + +VYLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHG 122
Query: 133 HGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQL 192
G HRD+K N+L+D +K++DFG+ A +F +R+R N GT ++APE++++
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGL-ATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 193 HGYDFKADIWSFGITALELAHGHAPFSK 220
+ D+WS GI + G P+ +
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 110/208 (52%), Gaps = 3/208 (1%)
Query: 13 AKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHP 72
+D+ L + +GEG V A+ E VA+K++D+++ + + I++E+ ++ NH
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 73 NVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHF 132
NV++ + G+ ++ + Y +GG ++ G EP + + +VYLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHG 122
Query: 133 HGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQL 192
G HRD+K N+L+D +K++DFG+ A +F +R+R N GT ++APE++++
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGL-ATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 193 HGYDFKADIWSFGITALELAHGHAPFSK 220
+ D+WS GI + G P+ +
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 110/208 (52%), Gaps = 3/208 (1%)
Query: 13 AKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHP 72
+D+ L + +GEG V A+ E VA+K++D+++ + + I++E+ ++ NH
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 73 NVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHF 132
NV++ + G+ ++ + Y +GG ++ G EP + + +VYLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHG 123
Query: 133 HGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQL 192
G HRD+K N+L+D +K++DFG+ A +F +R+R N GT ++APE++++
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGL-ATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 193 HGYDFKADIWSFGITALELAHGHAPFSK 220
+ D+WS GI + G P+ +
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 110/208 (52%), Gaps = 3/208 (1%)
Query: 13 AKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHP 72
+D+ L + +GEG V A+ E VA+K++D+++ + + I++E+ ++ NH
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 73 NVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHF 132
NV++ + G+ ++ + Y +GG ++ G EP + + +VYLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHG 122
Query: 133 HGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQL 192
G HRD+K N+L+D +K++DFG+ A +F +R+R N GT ++APE++++
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGL-ATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 193 HGYDFKADIWSFGITALELAHGHAPFSK 220
+ D+WS GI + G P+ +
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 110/208 (52%), Gaps = 3/208 (1%)
Query: 13 AKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHP 72
+D+ L + +GEG V A+ E VA+K++D+++ + + I++E+ ++ NH
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 73 NVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHF 132
NV++ + G+ ++ + Y +GG ++ G EP + + +VYLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHG 122
Query: 133 HGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQL 192
G HRD+K N+L+D +K++DFG+ A +F +R+R N GT ++APE++++
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGL-ATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 193 HGYDFKADIWSFGITALELAHGHAPFSK 220
+ D+WS GI + G P+ +
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 110/208 (52%), Gaps = 3/208 (1%)
Query: 13 AKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHP 72
+D+ L + +GEG V A+ E VA+K++D+++ + + I++E+ ++ NH
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 73 NVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHF 132
NV++ + G+ ++ + Y +GG ++ G EP + + +VYLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHG 122
Query: 133 HGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQL 192
G HRD+K N+L+D +K++DFG+ A +F +R+R N GT ++APE++++
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGL-ATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 193 HGYDFKADIWSFGITALELAHGHAPFSK 220
+ D+WS GI + G P+ +
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 105/210 (50%), Gaps = 13/210 (6%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNND--LDGIRREVQTM-RVTN 70
+D+ L +G G A V + I A+KV+ E N+D +D ++ E + +N
Sbjct: 20 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 79
Query: 71 HPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKS--AYPEGFEEPVIATLLRETLKALV 128
HP ++ H F T L+ V+ Y+ GG + M+ PE A E AL
Sbjct: 80 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA----EISLALN 135
Query: 129 YLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEV 188
YLH G I+RD+K N+L+DS G IKL D+G+ GD + + F GTP ++APE+
Sbjct: 136 YLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD---TTSXFCGTPNYIAPEI 192
Query: 189 MQQLHGYDFKADIWSFGITALELAHGHAPF 218
++ Y F D W+ G+ E+ G +PF
Sbjct: 193 LRG-EDYGFSVDWWALGVLMFEMMAGRSPF 221
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 110/208 (52%), Gaps = 3/208 (1%)
Query: 13 AKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHP 72
+D+ L + +GEG V A+ E VA+K++D+++ + + I++E+ ++ NH
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 73 NVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHF 132
NV++ + G+ ++ + Y +GG ++ G EP + + +VYLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHG 122
Query: 133 HGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQL 192
G HRD+K N+L+D +K++DFG+ A +F +R+R N GT ++APE++++
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGL-ATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 193 HGYDFKADIWSFGITALELAHGHAPFSK 220
+ D+WS GI + G P+ +
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 110/208 (52%), Gaps = 3/208 (1%)
Query: 13 AKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHP 72
+D+ L + +GEG V A+ E VA+K++D+++ + + I++E+ ++ NH
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 73 NVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHF 132
NV++ + G+ ++ + Y +GG ++ G EP + + +VYLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHG 122
Query: 133 HGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQL 192
G HRD+K N+L+D +K++DFG+ A +F +R+R N GT ++APE++++
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGL-ATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 193 HGYDFKADIWSFGITALELAHGHAPFSK 220
+ D+WS GI + G P+ +
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 110/208 (52%), Gaps = 3/208 (1%)
Query: 13 AKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHP 72
+D+ L + +GEG V A+ E VA+K++D+++ + + I++E+ ++ NH
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 73 NVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHF 132
NV++ + G+ ++ + Y +GG ++ G EP + + +VYLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHG 123
Query: 133 HGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQL 192
G HRD+K N+L+D +K++DFG+ A +F +R+R N GT ++APE++++
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGL-ATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 193 HGYDFKADIWSFGITALELAHGHAPFSK 220
+ D+WS GI + G P+ +
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 105/210 (50%), Gaps = 13/210 (6%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNND--LDGIRREVQTM-RVTN 70
+D+ L +G G A V + I A+KV+ E N+D +D ++ E + +N
Sbjct: 5 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 64
Query: 71 HPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKS--AYPEGFEEPVIATLLRETLKALV 128
HP ++ H F T L+ V+ Y+ GG + M+ PE A E AL
Sbjct: 65 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA----EISLALN 120
Query: 129 YLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEV 188
YLH G I+RD+K N+L+DS G IKL D+G+ GD + + F GTP ++APE+
Sbjct: 121 YLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD---TTSXFCGTPNYIAPEI 177
Query: 189 MQQLHGYDFKADIWSFGITALELAHGHAPF 218
++ Y F D W+ G+ E+ G +PF
Sbjct: 178 LRG-EDYGFSVDWWALGVLMFEMMAGRSPF 206
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 150/305 (49%), Gaps = 28/305 (9%)
Query: 11 VDAKDYRLYEEVGEGVSATVYRALCIP---LNEIVAIKVLD---LEKCNNDLDGIRREVQ 64
V +++ L + +G G V+ I ++ A+KVL + + + R E Q
Sbjct: 51 VGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQ 110
Query: 65 TMR-VTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL-HIMKSAYPEGFEEPVIATLLRE 122
+ + P ++ H +F T L +++ Y+ GG H+ + E F E + + E
Sbjct: 111 VLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQR---ERFTEHEVQIYVGE 167
Query: 123 TLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPC 182
+ AL +LH G I+RD+K NIL+DSNG + L DFG+S F A + +R+ + F GT
Sbjct: 168 IVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSK-EFVADETERAYD-FCGTIE 225
Query: 183 WMAPEVMQQL-HGYDFKADIWSFGITALELAHGHAPFS----KYPPMKVLLMTLQNAPPG 237
+MAP++++ G+D D WS G+ EL G +PF+ K ++ L++ PP
Sbjct: 226 YMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPP- 284
Query: 238 LDYERDKRFSKSFKELVTACLVKDPKKR-----PTAEKLMKHHFFKHARSNDFLARSIVD 292
+ S K+L+ L+KDPKKR A+++ +H FF+ +D A+ +
Sbjct: 285 ----YPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINWDDLAAKKVPA 340
Query: 293 NLAPL 297
P+
Sbjct: 341 PFKPV 345
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 136/268 (50%), Gaps = 11/268 (4%)
Query: 16 YRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCN-NDLDGIRREVQTMRVTNHPNV 74
Y+L+EE+G+G + V R + + + A K+++ +K + D + RE + R+ HPN+
Sbjct: 24 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNI 83
Query: 75 LRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHG 134
+R H S + +++ + GG + + E + E + +++ L+A+++ H G
Sbjct: 84 VRLHDSISEEGHHYLIFDLVTGGELFEDIVAR--EYYSEADASHCIQQILEAVLHCHQMG 141
Query: 135 HIHRDVKAGNILIDSN---GAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQ 191
+HRD+K N+L+ S A+KLADFG++ + Q++ F GTP +++PEV+++
Sbjct: 142 VVHRDLKPENLLLASKLKGAAVKLADFGLA---IEVEGEQQAWFGFAGTPGYLSPEVLRK 198
Query: 192 LHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFK 251
Y D+W+ G+ L G+ PF ++ A E D + K
Sbjct: 199 -DPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDT-VTPEAK 256
Query: 252 ELVTACLVKDPKKRPTAEKLMKHHFFKH 279
+L+ L +P KR TA + +KH + H
Sbjct: 257 DLINKMLTINPSKRITAAEALKHPWISH 284
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 133/264 (50%), Gaps = 11/264 (4%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCN-NDLDGIRREVQTMRVTNHPN 73
DY+L+EE+G+G + V R + + A K+++ +K + D + RE + R+ HPN
Sbjct: 32 DYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPN 91
Query: 74 VLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFH 133
++R H S + ++V + GG + + E + E + + + L+++ ++H H
Sbjct: 92 IVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR--EYYSEADASHCIHQILESVNHIHQH 149
Query: 134 GHIHRDVKAGNILIDSN---GAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
+HRD+K N+L+ S A+KLADFG++ + Q++ F GTP +++PEV++
Sbjct: 150 DIVHRDLKPENLLLASKCKGAAVKLADFGLA---IEVQGEQQAWFGFAGTPGYLSPEVLR 206
Query: 191 QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSF 250
+ Y DIW+ G+ L G+ PF K+ A E D +
Sbjct: 207 K-DPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDT-VTPEA 264
Query: 251 KELVTACLVKDPKKRPTAEKLMKH 274
K L+ L +P KR TA++ +KH
Sbjct: 265 KNLINQMLTINPAKRITADQALKH 288
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 131/295 (44%), Gaps = 43/295 (14%)
Query: 14 KDYRLYEEVGEGVSATV----------YRALCIPLNEIVAIKVLDLEKCNNDLDGIRREV 63
+D+++ +G G V Y A+ + EIV +++ +E N+ E
Sbjct: 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIV-VRLKQVEHTND-------ER 57
Query: 64 QTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRET 123
+ + HP ++R +F ++++M Y+ GG +++ + + F PV E
Sbjct: 58 LMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKS--QRFPNPVAKFYAAEV 115
Query: 124 LKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCW 183
AL YLH I+RD+K NIL+D NG IK+ DFG + + D GTP +
Sbjct: 116 CLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVT------YXLCGTPDY 169
Query: 184 MAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ---NAPPGLDY 240
+APEV+ Y+ D WSFGI E+ G+ PF MK L PP
Sbjct: 170 IAPEVVST-KPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPF--- 225
Query: 241 ERDKRFSKSFKELVTACLVKDPKKR-----PTAEKLMKHHFFKHARSNDFLARSI 290
F++ K+L++ + +D +R E + H +FK L+R+I
Sbjct: 226 -----FNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVWEKLLSRNI 275
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 110/216 (50%), Gaps = 12/216 (5%)
Query: 62 EVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLR 121
EV ++ +HPN+++ + F ++VM GG + + F E A +++
Sbjct: 54 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFD--EIILRQKFSEVDAAVIMK 111
Query: 122 ETLKALVYLHFHGHIHRDVKAGNILIDS---NGAIKLADFGVSACMFDAGDRQRSRNTFV 178
+ L YLH H +HRD+K N+L++S + IK+ DFG+SA F+ G + + R +
Sbjct: 112 QVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSA-HFEVGGKMKER---L 167
Query: 179 GTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGL 238
GT ++APEV+++ YD K D+WS G+ L G+ PF ++ L ++
Sbjct: 168 GTAYYIAPEVLRK--KYDEKCDVWSCGVILYILLCGYPPFGGQTDQEI-LKRVEKGKFSF 224
Query: 239 DYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKH 274
D + S K+LV L +P KR +AE+ + H
Sbjct: 225 DPPDWTQVSDEAKQLVKLMLTYEPSKRISAEEALNH 260
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 132/272 (48%), Gaps = 19/272 (6%)
Query: 13 AKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHP 72
+D+ L + +GEG V A+ E VA+K++D+++ + + I++E+ + NH
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHE 65
Query: 73 NVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHF 132
NV++ + G+ ++ + Y +GG ++ G EP + + +VYLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHG 123
Query: 133 HGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQL 192
G HRD+K N+L+D +K++DFG+ A +F +R+R N GT ++APE++++
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGL-ATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 193 HGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKE 252
+ D+WS GI + G P+ + + D++ K + +K+
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQ---------PSDSCQEYSDWKEKKTYLNPWKK 233
Query: 253 LVTA-------CLVKDPKKRPTAEKLMKHHFF 277
+ +A LV++P R T + K ++
Sbjct: 234 IDSAPLALLHKILVENPSARITIPDIKKDRWY 265
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 127/269 (47%), Gaps = 21/269 (7%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPN 73
K + E +G G + V A ++ A+K + + I E+ +R H N
Sbjct: 22 KIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHEN 81
Query: 74 VLRAHCSFTTGHCLWVVMPYMAGGSCL-HIMKSAYPEGFEEPVIATLLRETLKALVYLHF 132
++ + + + L++VM ++GG I++ + + E +TL+R+ L A+ YLH
Sbjct: 82 IVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGF---YTEKDASTLIRQVLDAVYYLHR 138
Query: 133 HGHIHRDVKAGNILI---DSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVM 189
G +HRD+K N+L D I ++DFG+S M GD +T GTP ++APEV+
Sbjct: 139 MGIVHRDLKPENLLYYSQDEESKIMISDFGLSK-MEGKGDVM---STACGTPGYVAPEVL 194
Query: 190 QQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRF--- 246
Q Y D WS G+ A L G+ PF K+ L+ +YE D +
Sbjct: 195 AQ-KPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILK-----AEYEFDSPYWDD 248
Query: 247 -SKSFKELVTACLVKDPKKRPTAEKLMKH 274
S S K+ + + KDP KR T E+ +H
Sbjct: 249 ISDSAKDFIRNLMEKDPNKRYTCEQAARH 277
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 133/277 (48%), Gaps = 30/277 (10%)
Query: 16 YRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTM-RVTNHPNV 74
Y + E++G G + R + N A+K++D K + E++ + R HPN+
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPT-----EEIEILLRYGQHPNI 78
Query: 75 LRAHCSFTTGHCLWVVMPYMAGGSCL-HIMKSAYPEGFEEPVIATLLRETLKALVYLHFH 133
+ + G ++VV GG L I++ + F E + +L K + YLH
Sbjct: 79 ITLKDVYDDGKYVYVVTELXKGGELLDKILRQKF---FSEREASAVLFTITKTVEYLHAQ 135
Query: 134 GHIHRDVKAGNIL-IDSNG---AIKLADFGVSACMFDAGDRQRSRNTFVGTPCW----MA 185
G +HRD+K NIL +D +G +I++ DFG + + R+ N + TPC+ +A
Sbjct: 136 GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL-------RAENGLLXTPCYTANFVA 188
Query: 186 PEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYP---PMKVLLMTLQNAPPGLDYER 242
PEV+++ GYD DIWS G+ G+ PF+ P P ++ L + + L
Sbjct: 189 PEVLER-QGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEI-LARIGSGKFSLSGGY 246
Query: 243 DKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFKH 279
S + K+LV+ L DP +R TA +++H + H
Sbjct: 247 WNSVSDTAKDLVSKXLHVDPHQRLTAALVLRHPWIVH 283
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 143/296 (48%), Gaps = 35/296 (11%)
Query: 11 VDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR----REVQTM 66
VD ++++ E++GEG VY+A E+VA+K + L + + +G+ RE+ +
Sbjct: 4 VDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL---DTETEGVPSTAIREISLL 60
Query: 67 RVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKA 126
+ NHPN+++ T + L++V ++ M ++ G P+I + L + L+
Sbjct: 61 KELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQG 119
Query: 127 LVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAP 186
L + H H +HRD+K N+LI++ GAIKLADFG++ G R+ V T + AP
Sbjct: 120 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRAP 176
Query: 187 EVMQQLHGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTL----QNAPPGL- 238
E++ Y DIWS G E+ A F S+ + + TL + PG+
Sbjct: 177 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 236
Query: 239 ---DYERD------KRFSKSF-------KELVTACLVKDPKKRPTAEKLMKHHFFK 278
DY+ + FSK + L++ L DP KR +A+ + H FF+
Sbjct: 237 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 292
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 128/275 (46%), Gaps = 15/275 (5%)
Query: 13 AKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNN-DLDGIRREVQTMRVTNH 71
A+ Y + +G+G V + + A+KV++ N D I REV+ ++ +H
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 72 PNVLRAHCSFTTGHCLWVVMPYMAGGSCL-HIMKSAYPEGFEEPVIATLLRETLKALVYL 130
PN+++ ++V GG I+K + F E A ++++ + Y+
Sbjct: 81 PNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKR---KRFSEHDAARIIKQVFSGITYM 137
Query: 131 HFHGHIHRDVKAGNILIDS---NGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPE 187
H H +HRD+K NIL++S + IK+ DFG+S C F + + R +GT ++APE
Sbjct: 138 HKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTC-FQQNTKMKDR---IGTAYYIAPE 193
Query: 188 VMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFS 247
V++ YD K D+WS G+ L G PF + L ++ D + + S
Sbjct: 194 VLR--GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDI-LKRVETGKYAFDLPQWRTIS 250
Query: 248 KSFKELVTACLVKDPKKRPTAEKLMKHHFFKHARS 282
K+L+ L P R TA + ++H + + S
Sbjct: 251 DDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSS 285
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 125/258 (48%), Gaps = 12/258 (4%)
Query: 20 EEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCN-NDLDGIRREVQTMRVTNHPNVLRAH 78
+ +G G TVY+ + VA+K+L++ L + EV +R T H N+L
Sbjct: 18 QRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LF 73
Query: 79 CSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHR 138
++T L +V + G S H + ++ + FE + + R+T + + YLH IHR
Sbjct: 74 MGYSTKPQLAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGMDYLHAKSIIHR 132
Query: 139 DVKAGNILIDSNGAIKLADFGVSACMFD-AGDRQRSRNTFVGTPCWMAPEV--MQQLHGY 195
D+K+ NI + + +K+ DFG++ +G Q + G+ WMAPEV MQ + Y
Sbjct: 133 DLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQ--LSGSILWMAPEVIRMQDSNPY 190
Query: 196 DFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDK-RFSKSFKELV 254
F++D+++FGI EL G P+S ++ + D + + K K L+
Sbjct: 191 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLM 250
Query: 255 TACLVKDPKKRPTAEKLM 272
CL K +RP+ +++
Sbjct: 251 AECLKKKRDERPSFPRIL 268
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 128/273 (46%), Gaps = 35/273 (12%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVL---DLEKCNNDLDGIRREVQTMRVTN 70
+D+ + +G+G VY A I+A+KVL LEK + +RREV+
Sbjct: 34 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLR 92
Query: 71 HPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYL 130
HPN+LR + F +++++ Y G+ ++ F+E AT + E AL Y
Sbjct: 93 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYC 150
Query: 131 HFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
H IHRD+K N+L+ S G +K+ADFG S + R T GT ++ PE+++
Sbjct: 151 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRTTLCGTLDYLPPEMIE 205
Query: 191 -QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKS 249
++H D K D+WS G+ E G PF T Q Y+R R +
Sbjct: 206 GRMH--DEKVDLWSLGVLCYEFLVGKPPFEA--------NTYQET-----YKRISRVEFT 250
Query: 250 F--------KELVTACLVKDPKKRPTAEKLMKH 274
F ++L++ L +P +RP ++++H
Sbjct: 251 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 283
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 126/262 (48%), Gaps = 13/262 (4%)
Query: 22 VGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAHCSF 81
+G+G VY + +AIK + E+ + + E+ + H N+++ SF
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIP-ERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 82 TTGHCLWVVMPYMAGGSCLHIMKSAY-PEGFEEPVIATLLRETLKALVYLHFHGHIHRDV 140
+ + + M + GGS +++S + P E I ++ L+ L YLH + +HRD+
Sbjct: 89 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDI 148
Query: 141 KAGNILIDS-NGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQ-LHGYDFK 198
K N+LI++ +G +K++DFG S + AG + TF GT +MAPE++ + GY
Sbjct: 149 KGDNVLINTYSGVLKISDFGTSKRL--AGINPCTE-TFTGTLQYMAPEIIDKGPRGYGKA 205
Query: 199 ADIWSFGITALELAHGHAPFSKY--PPMKVLLMTLQNAPPGLDYERDKRFSKSFKELVTA 256
ADIWS G T +E+A G PF + P + + + P E + S K +
Sbjct: 206 ADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHP----EIPESMSAEAKAFILK 261
Query: 257 CLVKDPKKRPTAEKLMKHHFFK 278
C DP KR A L+ F K
Sbjct: 262 CFEPDPDKRACANDLLVDEFLK 283
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 132/264 (50%), Gaps = 11/264 (4%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCN-NDLDGIRREVQTMRVTNHPN 73
+Y+LYE++G+G + V R + + A K+++ +K + D + RE + R+ H N
Sbjct: 5 EYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSN 64
Query: 74 VLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFH 133
++R H S + ++V + GG + + E + E + +++ L+A+++ H
Sbjct: 65 IVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR--EYYSEADASHCIQQILEAVLHCHQM 122
Query: 134 GHIHRDVKAGNILIDSN---GAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
G +HRD+K N+L+ S A+KLADFG++ + Q++ F GTP +++PEV++
Sbjct: 123 GVVHRDLKPENLLLASKCKGAAVKLADFGLA---IEVQGDQQAWFGFAGTPGYLSPEVLR 179
Query: 191 QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSF 250
+ Y DIW+ G+ L G+ PF K+ A E D +
Sbjct: 180 K-EAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDT-VTPEA 237
Query: 251 KELVTACLVKDPKKRPTAEKLMKH 274
K L+ L +P KR TA + +KH
Sbjct: 238 KNLINQMLTINPAKRITAHEALKH 261
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 128/273 (46%), Gaps = 35/273 (12%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVL---DLEKCNNDLDGIRREVQTMRVTN 70
+D+ + +G+G VY A I+A+KVL LEK + +RREV+
Sbjct: 25 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLR 83
Query: 71 HPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYL 130
HPN+LR + F +++++ Y G+ ++ F+E AT + E AL Y
Sbjct: 84 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYC 141
Query: 131 HFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
H IHRD+K N+L+ S G +K+ADFG S + R T GT ++ PE+++
Sbjct: 142 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRTTLCGTLDYLPPEMIE 196
Query: 191 -QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKS 249
++H D K D+WS G+ E G PF T Q Y+R R +
Sbjct: 197 GRMH--DEKVDLWSLGVLCYEFLVGKPPFEA--------NTYQET-----YKRISRVEFT 241
Query: 250 F--------KELVTACLVKDPKKRPTAEKLMKH 274
F ++L++ L +P +RP ++++H
Sbjct: 242 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 274
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 124/260 (47%), Gaps = 16/260 (6%)
Query: 20 EEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCN-NDLDGIRREVQTMRVTNHPNVLRAH 78
+ +G G TVY+ + VA+K+L++ L + EV +R T H N+L
Sbjct: 30 QRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LF 85
Query: 79 CSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHR 138
++T L +V + G S H + ++ + FE + + R+T + + YLH IHR
Sbjct: 86 MGYSTAPQLAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGMDYLHAKSIIHR 144
Query: 139 DVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTF---VGTPCWMAPEV--MQQLH 193
D+K+ NI + + +K+ DFG++ R + F G+ WMAPEV MQ +
Sbjct: 145 DLKSNNIFLHEDNTVKIGDFGLAT----EKSRWSGSHQFEQLSGSILWMAPEVIRMQDSN 200
Query: 194 GYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDK-RFSKSFKE 252
Y F++D+++FGI EL G P+S ++ + D + + K K
Sbjct: 201 PYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKR 260
Query: 253 LVTACLVKDPKKRPTAEKLM 272
L+ CL K +RP+ +++
Sbjct: 261 LMAECLKKKRDERPSFPRIL 280
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 110/216 (50%), Gaps = 12/216 (5%)
Query: 62 EVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLR 121
EV ++ +HPN+++ + F ++VM GG + + F E A +++
Sbjct: 71 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFD--EIILRQKFSEVDAAVIMK 128
Query: 122 ETLKALVYLHFHGHIHRDVKAGNILIDS---NGAIKLADFGVSACMFDAGDRQRSRNTFV 178
+ L YLH H +HRD+K N+L++S + IK+ DFG+SA F+ G + + R +
Sbjct: 129 QVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSA-HFEVGGKMKER---L 184
Query: 179 GTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGL 238
GT ++APEV+++ YD K D+WS G+ L G+ PF ++ L ++
Sbjct: 185 GTAYYIAPEVLRK--KYDEKCDVWSCGVILYILLCGYPPFGGQTDQEI-LKRVEKGKFSF 241
Query: 239 DYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKH 274
D + S K+LV L +P KR +AE+ + H
Sbjct: 242 DPPDWTQVSDEAKQLVKLMLTYEPSKRISAEEALNH 277
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 167/347 (48%), Gaps = 19/347 (5%)
Query: 1 MDLVVEKRFPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCN-NDLDGI 59
M + RF ++Y+L+EE+G+G + V R + + + A +++ +K + D +
Sbjct: 1 MATITCTRF---TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKL 57
Query: 60 RREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATL 119
RE + R+ HPN++R H S + +++ + GG + + E + E +
Sbjct: 58 EREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAR--EYYSEADASHC 115
Query: 120 LRETLKALVYLHFHGHIHRDVKAGNILIDSN---GAIKLADFGVSACMFDAGDRQRSRNT 176
+++ L+A+++ H G +HR++K N+L+ S A+KLADFG++ + Q++
Sbjct: 116 IQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLA---IEVEGEQQAWFG 172
Query: 177 FVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPP 236
F GTP +++PEV+++ Y D+W+ G+ L G+ PF ++ A
Sbjct: 173 FAGTPGYLSPEVLRK-DPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYD 231
Query: 237 GLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFKH--ARSNDFLARSIVDNL 294
E D + K+L+ L +P KR TA + +KH + H ++ + VD L
Sbjct: 232 FPSPEWDT-VTPEAKDLINKMLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVDCL 290
Query: 295 APLGERFRMLKAKEADLLVQNKALYEDKEQLSQ--QEYIRGISAWNF 339
R R LK +++ + K+++ + ++ I IS +F
Sbjct: 291 KKFNAR-RKLKGAILTVMLATRNFSVRKQEIIKVTEQLIEAISNGDF 336
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 124/260 (47%), Gaps = 16/260 (6%)
Query: 20 EEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCN-NDLDGIRREVQTMRVTNHPNVLRAH 78
+ +G G TVY+ + VA+K+L++ L + EV +R T H N+L
Sbjct: 30 QRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LF 85
Query: 79 CSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHR 138
++T L +V + G S H + ++ + FE + + R+T + + YLH IHR
Sbjct: 86 MGYSTKPQLAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGMDYLHAKSIIHR 144
Query: 139 DVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTF---VGTPCWMAPEV--MQQLH 193
D+K+ NI + + +K+ DFG++ R + F G+ WMAPEV MQ +
Sbjct: 145 DLKSNNIFLHEDNTVKIGDFGLAT----EKSRWSGSHQFEQLSGSILWMAPEVIRMQDSN 200
Query: 194 GYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDK-RFSKSFKE 252
Y F++D+++FGI EL G P+S ++ + D + + K K
Sbjct: 201 PYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKR 260
Query: 253 LVTACLVKDPKKRPTAEKLM 272
L+ CL K +RP+ +++
Sbjct: 261 LMAECLKKKRDERPSFPRIL 280
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 127/241 (52%), Gaps = 17/241 (7%)
Query: 42 VAIKVLDLEKCNN-DLDG-IRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSC 99
VA+K+L+ +K + D+ G I+RE+Q +++ HP++++ + +T ++VM Y++GG
Sbjct: 39 VAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGEL 98
Query: 100 L-HIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADF 158
+I K E E L ++ L A+ Y H H +HRD+K N+L+D++ K+ADF
Sbjct: 99 FDYICKHGRVEEMEA---RRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADF 155
Query: 159 GVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
G+S M D G+ R T G+P + APEV+ + DIWS G+ L G PF
Sbjct: 156 GLSNMMSD-GEFLR---TSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPF 211
Query: 219 -SKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFF 277
++ P TL G + + ++S L+ L DP KR T + + +H +F
Sbjct: 212 DDEHVP------TLFKKIRGGVFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREHEWF 265
Query: 278 K 278
K
Sbjct: 266 K 266
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 129/273 (47%), Gaps = 35/273 (12%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVL---DLEKCNNDLDGIRREVQTMRVTN 70
+D+ + +G+G VY A I+A+KVL LEK + +RREV+
Sbjct: 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLR 67
Query: 71 HPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYL 130
HPN+LR + F +++++ Y G+ ++ F+E AT + E AL Y
Sbjct: 68 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYC 125
Query: 131 HFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
H IHRD+K N+L+ S G +K+ADFG S C + R T GT ++ PE+++
Sbjct: 126 HSKRVIHRDIKPENLLLGSAGELKIADFGWS-CHAPSS----RRTTLSGTLDYLPPEMIE 180
Query: 191 -QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKS 249
++H D K D+WS G+ E G PF T Q Y+R R +
Sbjct: 181 GRMH--DEKVDLWSLGVLCYEFLVGKPPFEA--------NTYQET-----YKRISRVEFT 225
Query: 250 F--------KELVTACLVKDPKKRPTAEKLMKH 274
F ++L++ L +P +RP ++++H
Sbjct: 226 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 258
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 133/294 (45%), Gaps = 20/294 (6%)
Query: 12 DAKDYRLYEEVGEGVSATVYRALCIP---LNEIVAIKVLDLEKCN-NDLDGIRREVQTMR 67
D + L + +G+G V+ I ++ A+KVL D + E +
Sbjct: 22 DPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILV 81
Query: 68 VTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKAL 127
NHP +++ H +F T L++++ ++ GG + F E + L E AL
Sbjct: 82 EVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALAL 139
Query: 128 VYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPE 187
+LH G I+RD+K NIL+D G IKL DFG+S ++ D ++ +F GT +MAPE
Sbjct: 140 DHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCGTVEYMAPE 196
Query: 188 VMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFS 247
V+ + G+ AD WSFG+ E+ G PF + + M L+ A G+ + S
Sbjct: 197 VVNR-RGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILK-AKLGM----PQFLS 250
Query: 248 KSFKELVTACLVKDPKKRPTA-----EKLMKHHFFKHARSNDFLARSIVDNLAP 296
+ L+ ++P R A E++ +H FF N R I P
Sbjct: 251 PEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIHPPFKP 304
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 126/262 (48%), Gaps = 13/262 (4%)
Query: 22 VGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAHCSF 81
+G+G VY + +AIK + E+ + + E+ + H N+++ SF
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIP-ERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 82 TTGHCLWVVMPYMAGGSCLHIMKSAY-PEGFEEPVIATLLRETLKALVYLHFHGHIHRDV 140
+ + + M + GGS +++S + P E I ++ L+ L YLH + +HRD+
Sbjct: 75 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDI 134
Query: 141 KAGNILIDS-NGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQ-LHGYDFK 198
K N+LI++ +G +K++DFG S + AG + TF GT +MAPE++ + GY
Sbjct: 135 KGDNVLINTYSGVLKISDFGTSKRL--AGINPCTE-TFTGTLQYMAPEIIDKGPRGYGKA 191
Query: 199 ADIWSFGITALELAHGHAPFSKY--PPMKVLLMTLQNAPPGLDYERDKRFSKSFKELVTA 256
ADIWS G T +E+A G PF + P + + + P E + S K +
Sbjct: 192 ADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHP----EIPESMSAEAKAFILK 247
Query: 257 CLVKDPKKRPTAEKLMKHHFFK 278
C DP KR A L+ F K
Sbjct: 248 CFEPDPDKRACANDLLVDEFLK 269
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 135/273 (49%), Gaps = 17/273 (6%)
Query: 16 YRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNND----LDGIRREVQTMRVTNH 71
Y L E +G+G + V R + + A+K++D+ K + + ++RE + H
Sbjct: 28 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 87
Query: 72 PNVLRAHCSFTTGHCLWVVMPYMAGGS-CLHIMKSAYPEGF--EEPVIATLLRETLKALV 128
P+++ ++++ L++V +M G C I+K A GF E V + +R+ L+AL
Sbjct: 88 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRA-DAGFVYSEAVASHYMRQILEALR 146
Query: 129 YLHFHGHIHRDVKAGNILIDS---NGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
Y H + IHRDVK +L+ S + +KL FGV+ + ++G R VGTP +MA
Sbjct: 147 YCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGR---VGTPHFMA 203
Query: 186 PEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKR 245
PEV+++ Y D+W G+ L G PF Y + L + ++ +
Sbjct: 204 PEVVKR-EPYGKPVDVWGCGVILFILLSGCLPF--YGTKERLFEGIIKGKYKMNPRQWSH 260
Query: 246 FSKSFKELVTACLVKDPKKRPTAEKLMKHHFFK 278
S+S K+LV L+ DP +R T + + H + K
Sbjct: 261 ISESAKDLVRRMLMLDPAERITVYEALNHPWLK 293
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 127/261 (48%), Gaps = 20/261 (7%)
Query: 16 YRLYEEVGEGVSATVYRALCIPLNEIVAIKVL--DLEKCNNDLDGIRREVQTMRVTNHPN 73
Y L E +G G + V+ A + L+ VA+KVL DL + + RRE Q NHP
Sbjct: 14 YELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPA 73
Query: 74 VLRAHCS----FTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIAT-LLRETLKALV 128
++ + + G ++VM Y+ G + I+ + EG P A ++ + +AL
Sbjct: 74 IVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHT---EGPMTPKRAIEVIADACQALN 130
Query: 129 YLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEV 188
+ H +G IHRDVK NI+I + A+K+ DFG++ + D+G+ +GT +++PE
Sbjct: 131 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE- 189
Query: 189 MQQLHG--YDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQN--APPGLDYERDK 244
Q G D ++D++S G E+ G PF+ P+ V ++ PP R +
Sbjct: 190 --QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPS---ARHE 244
Query: 245 RFSKSFKELVTACLVKDPKKR 265
S +V L K+P+ R
Sbjct: 245 GLSADLDAVVLKALAKNPENR 265
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 108/208 (51%), Gaps = 11/208 (5%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVL--DLEKCNNDLDGIRREVQTMRVT-NH 71
++ +G+G V A ++ A+KVL D+ ++D++ E + + + NH
Sbjct: 24 NFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNH 83
Query: 72 PNVLRAHCSFTTGHCLWVVMPYMAGGSCL-HIMKSAYPEGFEEPVIATLLRETLKALVYL 130
P + + C F T L+ VM ++ GG + HI KS F+E E + AL++L
Sbjct: 84 PFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKS---RRFDEARARFYAAEIISALMFL 140
Query: 131 HFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
H G I+RD+K N+L+D G KLADFG+ G + TF GTP ++APE++Q
Sbjct: 141 HDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNG---VTTATFCGTPDYIAPEILQ 197
Query: 191 QLHGYDFKADIWSFGITALELAHGHAPF 218
++ Y D W+ G+ E+ GHAPF
Sbjct: 198 EML-YGPAVDWWAMGVLLYEMLCGHAPF 224
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 132/271 (48%), Gaps = 23/271 (8%)
Query: 12 DAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNH 71
D D+R + +G G + V A ++VAIK + E + E+ + H
Sbjct: 18 DIYDFR--DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKH 75
Query: 72 PNVLRAHCSFTTGHCLWVVMPYMAGGSCL-HIMKSAYPEGFEEPVIATLLRETLKALVYL 130
PN++ + +G L+++M ++GG I++ + + E + L+ + L A+ YL
Sbjct: 76 PNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF---YTERDASRLIFQVLDAVKYL 132
Query: 131 HFHGHIHRDVKAGNIL---IDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPE 187
H G +HRD+K N+L +D + I ++DFG+S M D G +T GTP ++APE
Sbjct: 133 HDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK-MEDPG---SVLSTACGTPGYVAPE 188
Query: 188 VMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRF- 246
V+ Q Y D WS G+ A L G+ PF K+ L+ +YE D +
Sbjct: 189 VLAQ-KPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKA-----EYEFDSPYW 242
Query: 247 ---SKSFKELVTACLVKDPKKRPTAEKLMKH 274
S S K+ + + KDP+KR T E+ ++H
Sbjct: 243 DDISDSAKDFIRHLMEKDPEKRFTCEQALQH 273
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 133/288 (46%), Gaps = 20/288 (6%)
Query: 12 DAKDYRLYEEVGEGVSATVYRALCIP---LNEIVAIKVLDLEKCN-NDLDGIRREVQTMR 67
D + L + +G+G V+ I ++ A+KVL D + E +
Sbjct: 22 DPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILV 81
Query: 68 VTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKAL 127
NHP +++ H +F T L++++ ++ GG + + F E + L E AL
Sbjct: 82 EVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLF--TRLSKEVMFTEEDVKFYLAELALAL 139
Query: 128 VYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPE 187
+LH G I+RD+K NIL+D G IKL DFG+S ++ D ++ +F GT +MAPE
Sbjct: 140 DHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCGTVEYMAPE 196
Query: 188 VMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFS 247
V+ + G+ AD WSFG+ E+ G PF + + M L+ A G+ + S
Sbjct: 197 VVNR-RGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILK-AKLGM----PQFLS 250
Query: 248 KSFKELVTACLVKDPKKRPTA-----EKLMKHHFFKHARSNDFLARSI 290
+ L+ ++P R A E++ +H FF N R I
Sbjct: 251 PEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREI 298
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 129/273 (47%), Gaps = 35/273 (12%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVL---DLEKCNNDLDGIRREVQTMRVTN 70
+D+ + +G+G VY A I+A+KVL LEK + +RREV+
Sbjct: 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLR 67
Query: 71 HPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYL 130
HPN+LR + F +++++ Y G+ ++ F+E AT + E AL Y
Sbjct: 68 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYC 125
Query: 131 HFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
H IHRD+K N+L+ S G +K+ADFG S + R+T GT ++ PE+++
Sbjct: 126 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRDTLCGTLDYLPPEMIE 180
Query: 191 -QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKS 249
++H D K D+WS G+ E G PF T Q Y+R R +
Sbjct: 181 GRMH--DEKVDLWSLGVLCYEFLVGKPPFEA--------NTYQET-----YKRISRVEFT 225
Query: 250 F--------KELVTACLVKDPKKRPTAEKLMKH 274
F ++L++ L +P +RP ++++H
Sbjct: 226 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 258
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 132/271 (48%), Gaps = 23/271 (8%)
Query: 12 DAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNH 71
D D+R + +G G + V A ++VAIK + E + E+ + H
Sbjct: 18 DIYDFR--DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKH 75
Query: 72 PNVLRAHCSFTTGHCLWVVMPYMAGGSCL-HIMKSAYPEGFEEPVIATLLRETLKALVYL 130
PN++ + +G L+++M ++GG I++ + + E + L+ + L A+ YL
Sbjct: 76 PNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF---YTERDASRLIFQVLDAVKYL 132
Query: 131 HFHGHIHRDVKAGNIL---IDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPE 187
H G +HRD+K N+L +D + I ++DFG+S M D G +T GTP ++APE
Sbjct: 133 HDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK-MEDPG---SVLSTACGTPGYVAPE 188
Query: 188 VMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRF- 246
V+ Q Y D WS G+ A L G+ PF K+ L+ +YE D +
Sbjct: 189 VLAQ-KPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKA-----EYEFDSPYW 242
Query: 247 ---SKSFKELVTACLVKDPKKRPTAEKLMKH 274
S S K+ + + KDP+KR T E+ ++H
Sbjct: 243 DDISDSAKDFIRHLMEKDPEKRFTCEQALQH 273
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 133/288 (46%), Gaps = 20/288 (6%)
Query: 12 DAKDYRLYEEVGEGVSATVYRALCIP---LNEIVAIKVLDLEKCN-NDLDGIRREVQTMR 67
D + L + +G+G V+ I ++ A+KVL D + E +
Sbjct: 23 DPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILV 82
Query: 68 VTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKAL 127
NHP +++ H +F T L++++ ++ GG + + F E + L E AL
Sbjct: 83 EVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLF--TRLSKEVMFTEEDVKFYLAELALAL 140
Query: 128 VYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPE 187
+LH G I+RD+K NIL+D G IKL DFG+S ++ D ++ +F GT +MAPE
Sbjct: 141 DHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCGTVEYMAPE 197
Query: 188 VMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFS 247
V+ + G+ AD WSFG+ E+ G PF + + M L+ A G+ + S
Sbjct: 198 VVNR-RGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILK-AKLGM----PQFLS 251
Query: 248 KSFKELVTACLVKDPKKRPTA-----EKLMKHHFFKHARSNDFLARSI 290
+ L+ ++P R A E++ +H FF N R I
Sbjct: 252 PEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREI 299
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 128/273 (46%), Gaps = 35/273 (12%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVL---DLEKCNNDLDGIRREVQTMRVTN 70
+D+ + +G+G VY A I+A+KVL LEK + +RREV+
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLR 66
Query: 71 HPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYL 130
HPN+LR + F +++++ Y G+ ++ F+E AT + E AL Y
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYC 124
Query: 131 HFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
H IHRD+K N+L+ S G +K+ADFG S + R T GT ++ PE+++
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRTTLCGTLDYLPPEMIE 179
Query: 191 -QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKS 249
++H D K D+WS G+ E G PF T Q Y+R R +
Sbjct: 180 GRMH--DEKVDLWSLGVLCYEFLVGKPPFEA--------NTYQET-----YKRISRVEFT 224
Query: 250 F--------KELVTACLVKDPKKRPTAEKLMKH 274
F ++L++ L +P +RP ++++H
Sbjct: 225 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 257
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 135/273 (49%), Gaps = 17/273 (6%)
Query: 16 YRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNND----LDGIRREVQTMRVTNH 71
Y L E +G+G + V R + + A+K++D+ K + + ++RE + H
Sbjct: 26 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 72 PNVLRAHCSFTTGHCLWVVMPYMAGGS-CLHIMKSAYPEGF--EEPVIATLLRETLKALV 128
P+++ ++++ L++V +M G C I+K A GF E V + +R+ L+AL
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRA-DAGFVYSEAVASHYMRQILEALR 144
Query: 129 YLHFHGHIHRDVKAGNILIDS---NGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
Y H + IHRDVK +L+ S + +KL FGV+ + ++G R VGTP +MA
Sbjct: 145 YCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGR---VGTPHFMA 201
Query: 186 PEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKR 245
PEV+++ Y D+W G+ L G PF Y + L + ++ +
Sbjct: 202 PEVVKR-EPYGKPVDVWGCGVILFILLSGCLPF--YGTKERLFEGIIKGKYKMNPRQWSH 258
Query: 246 FSKSFKELVTACLVKDPKKRPTAEKLMKHHFFK 278
S+S K+LV L+ DP +R T + + H + K
Sbjct: 259 ISESAKDLVRRMLMLDPAERITVYEALNHPWLK 291
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 128/273 (46%), Gaps = 35/273 (12%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVL---DLEKCNNDLDGIRREVQTMRVTN 70
+D+ + +G+G VY A I+A+KVL LEK + +RREV+
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLR 69
Query: 71 HPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYL 130
HPN+LR + F +++++ Y G+ ++ F+E AT + E AL Y
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYC 127
Query: 131 HFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
H IHRD+K N+L+ S G +K+ADFG S + R T GT ++ PE+++
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRTTLCGTLDYLPPEMIE 182
Query: 191 -QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKS 249
++H D K D+WS G+ E G PF T Q Y+R R +
Sbjct: 183 GRMH--DEKVDLWSLGVLCYEFLVGKPPFEA--------NTYQET-----YKRISRVEFT 227
Query: 250 F--------KELVTACLVKDPKKRPTAEKLMKH 274
F ++L++ L +P +RP ++++H
Sbjct: 228 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 260
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 132/271 (48%), Gaps = 23/271 (8%)
Query: 12 DAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNH 71
D D+R + +G G + V A ++VAIK + E + E+ + H
Sbjct: 18 DIYDFR--DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKH 75
Query: 72 PNVLRAHCSFTTGHCLWVVMPYMAGGSCL-HIMKSAYPEGFEEPVIATLLRETLKALVYL 130
PN++ + +G L+++M ++GG I++ + + E + L+ + L A+ YL
Sbjct: 76 PNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF---YTERDASRLIFQVLDAVKYL 132
Query: 131 HFHGHIHRDVKAGNIL---IDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPE 187
H G +HRD+K N+L +D + I ++DFG+S M D G +T GTP ++APE
Sbjct: 133 HDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK-MEDPG---SVLSTACGTPGYVAPE 188
Query: 188 VMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRF- 246
V+ Q Y D WS G+ A L G+ PF K+ L+ +YE D +
Sbjct: 189 VLAQ-KPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKA-----EYEFDSPYW 242
Query: 247 ---SKSFKELVTACLVKDPKKRPTAEKLMKH 274
S S K+ + + KDP+KR T E+ ++H
Sbjct: 243 DDISDSAKDFIRHLMEKDPEKRFTCEQALQH 273
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 128/273 (46%), Gaps = 35/273 (12%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVL---DLEKCNNDLDGIRREVQTMRVTN 70
+D+ + +G+G VY A I+A+KVL LEK + +RREV+
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLR 71
Query: 71 HPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYL 130
HPN+LR + F +++++ Y G+ ++ F+E AT + E AL Y
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYC 129
Query: 131 HFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
H IHRD+K N+L+ S G +K+ADFG S + R T GT ++ PE+++
Sbjct: 130 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRTTLCGTLDYLPPEMIE 184
Query: 191 -QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKS 249
++H D K D+WS G+ E G PF T Q Y+R R +
Sbjct: 185 GRMH--DEKVDLWSLGVLCYEFLVGKPPFEA--------NTYQET-----YKRISRVEFT 229
Query: 250 F--------KELVTACLVKDPKKRPTAEKLMKH 274
F ++L++ L +P +RP ++++H
Sbjct: 230 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 262
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 133/297 (44%), Gaps = 26/297 (8%)
Query: 12 DAKDYRLYEEVGEGVSATVY--RALCIP-LNEIVAIKVLDLEKCN-NDLDGIRREVQTMR 67
D + L + +G+G V+ R + P + A+KVL D + E +
Sbjct: 26 DPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILA 85
Query: 68 VTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKAL 127
NHP V++ H +F T L++++ ++ GG + + F E + L E L
Sbjct: 86 DVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLF--TRLSKEVMFTEEDVKFYLAELALGL 143
Query: 128 VYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPE 187
+LH G I+RD+K NIL+D G IKL DFG+S +A D ++ +F GT +MAPE
Sbjct: 144 DHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK---EAIDHEKKAYSFCGTVEYMAPE 200
Query: 188 VMQQLHGYDFKADIWSFGITALELAHGHAPFS---KYPPMKVLLMTLQNAPPGLDYERDK 244
V+ + G+ AD WS+G+ E+ G PF + M ++L P L E
Sbjct: 201 VVNR-QGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQFLSTEA-- 257
Query: 245 RFSKSFKELVTACLVKDPKKR-----PTAEKLMKHHFFKHARSNDFLARSIVDNLAP 296
+ L+ A ++P R AE++ +H F+ N R I P
Sbjct: 258 ------QSLLRALFKRNPANRLGSGPDGAEEIKRHVFYSTIDWNKLYRREIKPPFKP 308
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 127/273 (46%), Gaps = 35/273 (12%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVL---DLEKCNNDLDGIRREVQTMRVTN 70
+D+ + +G+G VY A I+A+KVL LEK + +RREV+
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLR 71
Query: 71 HPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYL 130
HPN+LR + F +++++ Y G ++ F+E AT + E AL Y
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKL--SKFDEQRTATYITELANALSYC 129
Query: 131 HFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
H IHRD+K N+L+ S G +K+ADFG S + R T GT ++ PE+++
Sbjct: 130 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRTTLCGTLDYLPPEMIE 184
Query: 191 -QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKS 249
++H D K D+WS G+ E G PF T Q Y+R R +
Sbjct: 185 GRMH--DEKVDLWSLGVLCYEFLVGKPPFEA--------NTYQET-----YKRISRVEFT 229
Query: 250 F--------KELVTACLVKDPKKRPTAEKLMKH 274
F ++L++ L +P +RP ++++H
Sbjct: 230 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 262
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 128/273 (46%), Gaps = 35/273 (12%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVL---DLEKCNNDLDGIRREVQTMRVTN 70
+D+ + +G+G VY A I+A+KVL LEK + +RREV+
Sbjct: 34 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLR 92
Query: 71 HPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYL 130
HPN+LR + F +++++ Y G+ ++ F+E AT + E AL Y
Sbjct: 93 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYC 150
Query: 131 HFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
H IHRD+K N+L+ S G +K+ADFG S + R+ GT ++ PE+++
Sbjct: 151 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRDDLCGTLDYLPPEMIE 205
Query: 191 -QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKS 249
++H D K D+WS G+ E G PF T Q Y+R R +
Sbjct: 206 GRMH--DEKVDLWSLGVLCYEFLVGKPPFEA--------NTYQET-----YKRISRVEFT 250
Query: 250 F--------KELVTACLVKDPKKRPTAEKLMKH 274
F ++L++ L +P +RP ++++H
Sbjct: 251 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 283
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 126/261 (48%), Gaps = 20/261 (7%)
Query: 16 YRLYEEVGEGVSATVYRALCIPLNEIVAIKVL--DLEKCNNDLDGIRREVQTMRVTNHPN 73
Y L E +G G + V+ A + L+ VA+KVL DL + + RRE Q NHP
Sbjct: 14 YELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPA 73
Query: 74 VLRAH----CSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIAT-LLRETLKALV 128
++ + G ++VM Y+ G + I+ + EG P A ++ + +AL
Sbjct: 74 IVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT---EGPMTPKRAIEVIADACQALN 130
Query: 129 YLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEV 188
+ H +G IHRDVK NI+I + A+K+ DFG++ + D+G+ +GT +++PE
Sbjct: 131 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE- 189
Query: 189 MQQLHG--YDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQN--APPGLDYERDK 244
Q G D ++D++S G E+ G PF+ P+ V ++ PP R +
Sbjct: 190 --QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPS---ARHE 244
Query: 245 RFSKSFKELVTACLVKDPKKR 265
S +V L K+P+ R
Sbjct: 245 GLSADLDAVVLKALAKNPENR 265
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 128/273 (46%), Gaps = 35/273 (12%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVL---DLEKCNNDLDGIRREVQTMRVTN 70
+D+ + +G+G VY A I+A+KVL LEK + +RREV+
Sbjct: 12 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLR 70
Query: 71 HPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYL 130
HPN+LR + F +++++ Y G+ ++ F+E AT + E AL Y
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYC 128
Query: 131 HFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
H IHRD+K N+L+ S G +K+ADFG S + R T GT ++ PE+++
Sbjct: 129 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRTTLCGTLDYLPPEMIE 183
Query: 191 -QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKS 249
++H D K D+WS G+ E G PF T Q Y+R R +
Sbjct: 184 GRMH--DEKVDLWSLGVLCYEFLVGKPPFEA--------NTYQET-----YKRISRVEFT 228
Query: 250 F--------KELVTACLVKDPKKRPTAEKLMKH 274
F ++L++ L +P +RP ++++H
Sbjct: 229 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 261
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 121/234 (51%), Gaps = 16/234 (6%)
Query: 55 DLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEP 114
D+D ++E++ M+ +HPN++R + +F +++VM GG + + F E
Sbjct: 66 DVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFE--RVVHKRVFRES 123
Query: 115 VIATLLRETLKALVYLHFHGHIHRDVKAGNILI--DS-NGAIKLADFGVSACMFDAGDRQ 171
A ++++ L A+ Y H HRD+K N L DS + +KL DFG++A F G
Sbjct: 124 DAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAA-RFKPGKMM 182
Query: 172 RSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTL 231
R++ VGTP +++P+V++ L+G + D WS G+ L G+ PFS +V+L
Sbjct: 183 RTK---VGTPYYVSPQVLEGLYGPE--CDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIR 237
Query: 232 QN--APPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFKHARSN 283
+ P D+ S + L+ L K PK+R T+ + ++H +F+ S+
Sbjct: 238 EGTFTFPEKDW---LNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQLSS 288
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 133/280 (47%), Gaps = 28/280 (10%)
Query: 20 EEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCN-NDLDGIRREVQTMRVTNHPNVLRAH 78
+ +G G TVY+ + VA+K+L++ L + EV +R T H N+L
Sbjct: 41 QRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LF 96
Query: 79 CSFTTGHCLWVVMPYMAGGSC---LHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGH 135
++T L +V + G S LHI+++ FE + + R+T + + YLH
Sbjct: 97 MGYSTKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLHAKSI 152
Query: 136 IHRDVKAGNILIDSNGAIKLADFGVSACMFD-AGDRQRSRNTFVGTPCWMAPEV--MQQL 192
IHRD+K+ NI + + +K+ DFG++ +G Q + G+ WMAPEV MQ
Sbjct: 153 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ--LSGSILWMAPEVIRMQDK 210
Query: 193 HGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNA--PPGLDYERDKRFSKSF 250
+ Y F++D+++FGI EL G P+S ++ + P L R K+
Sbjct: 211 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSN-CPKAM 269
Query: 251 KELVTACLVKDPKKRPTAEKLMKHHFFKHARSNDFLARSI 290
K L+ CL K +RP +++ S + LARS+
Sbjct: 270 KRLMAECLKKKRDERPLFPQILA--------SIELLARSL 301
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 133/280 (47%), Gaps = 28/280 (10%)
Query: 20 EEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCN-NDLDGIRREVQTMRVTNHPNVLRAH 78
+ +G G TVY+ + VA+K+L++ L + EV +R T H N+L
Sbjct: 42 QRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LF 97
Query: 79 CSFTTGHCLWVVMPYMAGGSC---LHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGH 135
++T L +V + G S LHI+++ FE + + R+T + + YLH
Sbjct: 98 MGYSTKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLHAKSI 153
Query: 136 IHRDVKAGNILIDSNGAIKLADFGVSACMFD-AGDRQRSRNTFVGTPCWMAPEV--MQQL 192
IHRD+K+ NI + + +K+ DFG++ +G Q + G+ WMAPEV MQ
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ--LSGSILWMAPEVIRMQDK 211
Query: 193 HGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNA--PPGLDYERDKRFSKSF 250
+ Y F++D+++FGI EL G P+S ++ + P L R K+
Sbjct: 212 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSN-CPKAM 270
Query: 251 KELVTACLVKDPKKRPTAEKLMKHHFFKHARSNDFLARSI 290
K L+ CL K +RP +++ S + LARS+
Sbjct: 271 KRLMAECLKKKRDERPLFPQILA--------SIELLARSL 302
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 128/273 (46%), Gaps = 35/273 (12%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVL---DLEKCNNDLDGIRREVQTMRVTN 70
+D+ + +G+G VY A I+A+KVL LEK + +RREV+
Sbjct: 7 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLR 65
Query: 71 HPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYL 130
HPN+LR + F +++++ Y G+ ++ F+E AT + E AL Y
Sbjct: 66 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYC 123
Query: 131 HFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
H IHRD+K N+L+ S G +K+ADFG S + R T GT ++ PE+++
Sbjct: 124 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRTTLCGTLDYLPPEMIE 178
Query: 191 -QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKS 249
++H D K D+WS G+ E G PF T Q Y+R R +
Sbjct: 179 GRMH--DEKVDLWSLGVLCYEFLVGKPPFEA--------NTYQET-----YKRISRVEFT 223
Query: 250 F--------KELVTACLVKDPKKRPTAEKLMKH 274
F ++L++ L +P +RP ++++H
Sbjct: 224 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 256
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 135/295 (45%), Gaps = 16/295 (5%)
Query: 1 MDLVVEKRFPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNN-DLDGI 59
+DL E + + Y +++GEG IK +++ + ++ + +
Sbjct: 11 VDLGTENLYFQSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREES 70
Query: 60 RREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATL 119
RREV + HPN+++ SF L++VM Y GG + + F+E I
Sbjct: 71 RREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDW 130
Query: 120 LRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVG 179
+ AL ++H +HRD+K+ NI + +G ++L DFG++ + + R+ +G
Sbjct: 131 FVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARA---CIG 187
Query: 180 TPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNA---PP 236
TP +++PE+ + Y+ K+DIW+ G EL F MK L++ + + P
Sbjct: 188 TPYYLSPEICEN-KPYNNKSDIWALGCVLYELCTLKHAFEA-GSMKNLVLKIISGSFPPV 245
Query: 237 GLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFKHARSNDFLARSIV 291
L Y D R LV+ ++P+ RP+ +++ F R FL+ ++
Sbjct: 246 SLHYSYDLR------SLVSQLFKRNPRDRPSVNSILEKGFIAK-RIEKFLSPQLI 293
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 126/241 (52%), Gaps = 17/241 (7%)
Query: 42 VAIKVLDLEKCNN-DLDG-IRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSC 99
VA+K+L+ +K + D+ G I+RE+Q +++ HP++++ + +T ++VM Y++GG
Sbjct: 39 VAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGEL 98
Query: 100 L-HIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADF 158
+I K E E L ++ L A+ Y H H +HRD+K N+L+D++ K+ADF
Sbjct: 99 FDYICKHGRVEEMEA---RRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADF 155
Query: 159 GVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
G+S M D G+ R G+P + APEV+ + DIWS G+ L G PF
Sbjct: 156 GLSNMMSD-GEFLRDS---CGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPF 211
Query: 219 -SKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFF 277
++ P TL G + + ++S L+ L DP KR T + + +H +F
Sbjct: 212 DDEHVP------TLFKKIRGGVFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREHEWF 265
Query: 278 K 278
K
Sbjct: 266 K 266
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 128/273 (46%), Gaps = 35/273 (12%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVL---DLEKCNNDLDGIRREVQTMRVTN 70
+D+ + +G+G VY A I+A+KVL LEK + +RREV+
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLR 69
Query: 71 HPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYL 130
HPN+LR + F +++++ Y G+ ++ F+E AT + E AL Y
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYC 127
Query: 131 HFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
H IHRD+K N+L+ S G +K+ADFG S + R T GT ++ PE+++
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRTTLCGTLDYLPPEMIE 182
Query: 191 -QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKS 249
++H D K D+WS G+ E G PF T Q Y+R R +
Sbjct: 183 GRMH--DEKVDLWSLGVLCYEFLVGKPPFEA--------NTYQET-----YKRISRVEFT 227
Query: 250 F--------KELVTACLVKDPKKRPTAEKLMKH 274
F ++L++ L +P +RP ++++H
Sbjct: 228 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 260
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 125/272 (45%), Gaps = 33/272 (12%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVL---DLEKCNNDLDGIRREVQTMRVTN 70
+D+ + +G+G VY A I+A+KVL LEK + +RREV+
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLR 71
Query: 71 HPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYL 130
HPN+LR + F +++++ Y G+ ++ F+E AT + E AL Y
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYC 129
Query: 131 HFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
H IHRD+K N+L+ S G +K+ADFG S + R T GT ++ PE ++
Sbjct: 130 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRTTLCGTLDYLPPEXIE 184
Query: 191 QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSF 250
+D K D+WS G+ E G PF T Q Y+R R +F
Sbjct: 185 G-RXHDEKVDLWSLGVLCYEFLVGKPPFEA--------NTYQET-----YKRISRVEFTF 230
Query: 251 --------KELVTACLVKDPKKRPTAEKLMKH 274
++L++ L +P +RP ++++H
Sbjct: 231 PDFVTEGARDLISRLLKHNPSQRPXLREVLEH 262
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 134/272 (49%), Gaps = 30/272 (11%)
Query: 16 YRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTM-RVTNHPNV 74
Y + E +G G + R + N A+KV+D K + E++ + R HPN+
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPS-----EEIEILLRYGQHPNI 83
Query: 75 LRAHCSFTTGHCLWVVMPYMAGGSCL-HIMKSAYPEGFEEPVIATLLRETLKALVYLHFH 133
+ + G +++V M GG L I++ + F E + +L K + YLH
Sbjct: 84 ITLKDVYDDGKHVYLVTELMRGGELLDKILRQKF---FSEREASFVLHTIGKTVEYLHSQ 140
Query: 134 GHIHRDVKAGNIL-IDSNG---AIKLADFGVSACMFDAGDRQRSRNTFVGTPCW----MA 185
G +HRD+K NIL +D +G +++ DFG + + R+ N + TPC+ +A
Sbjct: 141 GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQL-------RAENGLLMTPCYTANFVA 193
Query: 186 PEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYP---PMKVLLMTLQNAPPGLDYER 242
PEV+++ GYD DIWS GI + G+ PF+ P P ++ L + + L
Sbjct: 194 PEVLKR-QGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEI-LTRIGSGKFTLSGGN 251
Query: 243 DKRFSKSFKELVTACLVKDPKKRPTAEKLMKH 274
S++ K+LV+ L DP +R TA+++++H
Sbjct: 252 WNTVSETAKDLVSKMLHVDPHQRLTAKQVLQH 283
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 128/273 (46%), Gaps = 35/273 (12%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVL---DLEKCNNDLDGIRREVQTMRVTN 70
+D+ + +G+G VY A I+A+KVL LEK + +RREV+
Sbjct: 5 EDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLR 63
Query: 71 HPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYL 130
HPN+LR + F +++++ Y G+ ++ F+E AT + E AL Y
Sbjct: 64 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYC 121
Query: 131 HFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
H IHRD+K N+L+ S G +K+ADFG S + R T GT ++ PE+++
Sbjct: 122 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRTTLCGTLDYLPPEMIE 176
Query: 191 -QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKS 249
++H D K D+WS G+ E G PF T Q Y+R R +
Sbjct: 177 GRMH--DEKVDLWSLGVLCYEFLVGKPPFEA--------NTYQET-----YKRISRVEFT 221
Query: 250 F--------KELVTACLVKDPKKRPTAEKLMKH 274
F ++L++ L +P +RP ++++H
Sbjct: 222 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 254
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 121/234 (51%), Gaps = 16/234 (6%)
Query: 55 DLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEP 114
D+D ++E++ M+ +HPN++R + +F +++VM GG + + F E
Sbjct: 49 DVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFE--RVVHKRVFRES 106
Query: 115 VIATLLRETLKALVYLHFHGHIHRDVKAGNILI--DS-NGAIKLADFGVSACMFDAGDRQ 171
A ++++ L A+ Y H HRD+K N L DS + +KL DFG++A F G
Sbjct: 107 DAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAA-RFKPGKMM 165
Query: 172 RSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTL 231
R++ VGTP +++P+V++ L+G + D WS G+ L G+ PFS +V+L
Sbjct: 166 RTK---VGTPYYVSPQVLEGLYGPE--CDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIR 220
Query: 232 QN--APPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFKHARSN 283
+ P D+ S + L+ L K PK+R T+ + ++H +F+ S+
Sbjct: 221 EGTFTFPEKDW---LNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQLSS 271
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 130/272 (47%), Gaps = 18/272 (6%)
Query: 9 FPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDL-EKCNNDLDGIRREVQTMR 67
+ ++A + L +G G TVY+ + VA+K+L + + R EV +R
Sbjct: 31 WEIEASEVMLSTRIGSGSFGTVYKG---KWHGDVAVKILKVVDPTPEQFQAFRNEVAVLR 87
Query: 68 VTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSC---LHIMKSAYPEGFEEPVIATLLRETL 124
T H N+L + T L +V + G S LH+ ++ F+ + + R+T
Sbjct: 88 KTRHVNIL-LFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETK----FQMFQLIDIARQTA 142
Query: 125 KALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFD-AGDRQRSRNTFVGTPCW 183
+ + YLH IHRD+K+ NI + +K+ DFG++ +G +Q + T G+ W
Sbjct: 143 QGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPT--GSVLW 200
Query: 184 MAPEV--MQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYE 241
MAPEV MQ + + F++D++S+GI EL G P+S ++ + D
Sbjct: 201 MAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLS 260
Query: 242 R-DKRFSKSFKELVTACLVKDPKKRPTAEKLM 272
+ K K+ K LV C+ K ++RP +++
Sbjct: 261 KLYKNCPKAMKRLVADCVKKVKEERPLFPQIL 292
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 133/280 (47%), Gaps = 28/280 (10%)
Query: 20 EEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCN-NDLDGIRREVQTMRVTNHPNVLRAH 78
+ +G G TVY+ + VA+K+L++ L + EV +R T H N+L
Sbjct: 19 QRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LF 74
Query: 79 CSFTTGHCLWVVMPYMAGGSC---LHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGH 135
++T L +V + G S LHI+++ FE + + R+T + + YLH
Sbjct: 75 MGYSTKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLHAKSI 130
Query: 136 IHRDVKAGNILIDSNGAIKLADFGVSACMFD-AGDRQRSRNTFVGTPCWMAPEV--MQQL 192
IHRD+K+ NI + + +K+ DFG++ +G Q + G+ WMAPEV MQ
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ--LSGSILWMAPEVIRMQDK 188
Query: 193 HGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNA--PPGLDYERDKRFSKSF 250
+ Y F++D+++FGI EL G P+S ++ + P L R K+
Sbjct: 189 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSN-CPKAM 247
Query: 251 KELVTACLVKDPKKRPTAEKLMKHHFFKHARSNDFLARSI 290
K L+ CL K +RP +++ S + LARS+
Sbjct: 248 KRLMAECLKKKRDERPLFPQILA--------SIELLARSL 279
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 133/280 (47%), Gaps = 28/280 (10%)
Query: 20 EEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCN-NDLDGIRREVQTMRVTNHPNVLRAH 78
+ +G G TVY+ + VA+K+L++ L + EV +R T H N+L
Sbjct: 14 QRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LF 69
Query: 79 CSFTTGHCLWVVMPYMAGGSC---LHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGH 135
++T L +V + G S LHI+++ FE + + R+T + + YLH
Sbjct: 70 MGYSTAPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLHAKSI 125
Query: 136 IHRDVKAGNILIDSNGAIKLADFGVSACMFD-AGDRQRSRNTFVGTPCWMAPEV--MQQL 192
IHRD+K+ NI + + +K+ DFG++ +G Q + G+ WMAPEV MQ
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ--LSGSILWMAPEVIRMQDK 183
Query: 193 HGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNA--PPGLDYERDKRFSKSF 250
+ Y F++D+++FGI EL G P+S ++ + P L R K+
Sbjct: 184 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSN-CPKAM 242
Query: 251 KELVTACLVKDPKKRPTAEKLMKHHFFKHARSNDFLARSI 290
K L+ CL K +RP +++ S + LARS+
Sbjct: 243 KRLMAECLKKKRDERPLFPQILA--------SIELLARSL 274
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 140/297 (47%), Gaps = 35/297 (11%)
Query: 10 PVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR----REVQT 65
P ++++ E++GEG VY+A E+VA+K + L + + +G+ RE+
Sbjct: 2 PGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL---DTETEGVPSTAIREISL 58
Query: 66 MRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
++ NHPN+++ T + L++V ++ M ++ G P+I + L + L+
Sbjct: 59 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQ 117
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
L + H H +HRD+K N+LI++ GAIKLADFG++ G R+ V T + A
Sbjct: 118 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRA 174
Query: 186 PEVMQQLHGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTL----QNAPPGL 238
PE++ Y DIWS G E+ A F S+ + + TL + PG+
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 234
Query: 239 DYERDKR----------FSKSF-------KELVTACLVKDPKKRPTAEKLMKHHFFK 278
D + FSK + L++ L DP KR +A+ + H FF+
Sbjct: 235 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 122/242 (50%), Gaps = 16/242 (6%)
Query: 43 AIKVLDLE--KCNNDLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL 100
A+KV+ K D + + REVQ ++ +HPN+++ + F ++V GG
Sbjct: 79 AVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELF 138
Query: 101 HIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDS---NGAIKLAD 157
+ S + F E A ++R+ L + Y+H + +HRD+K N+L++S + I++ D
Sbjct: 139 DEIIS--RKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIID 196
Query: 158 FGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLHG-YDFKADIWSFGITALELAHGHA 216
FG+S F+A + + + +GT ++APEV LHG YD K D+WS G+ L G
Sbjct: 197 FGLST-HFEASKKMKDK---IGTAYYIAPEV---LHGTYDEKCDVWSTGVILYILLSGCP 249
Query: 217 PFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHF 276
PF+ + L ++ + + K+ S+S K+L+ L P R +A + H +
Sbjct: 250 PFNGANEYDI-LKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEW 308
Query: 277 FK 278
+
Sbjct: 309 IQ 310
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 140/297 (47%), Gaps = 35/297 (11%)
Query: 10 PVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR----REVQT 65
P ++++ E++GEG VY+A E+VA+K + L + + +G+ RE+
Sbjct: 1 PGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL---DTETEGVPSTAIREISL 57
Query: 66 MRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
++ NHPN+++ T + L++V ++ M ++ G P+I + L + L+
Sbjct: 58 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQ 116
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
L + H H +HRD+K N+LI++ GAIKLADFG++ G R+ V T + A
Sbjct: 117 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRA 173
Query: 186 PEVMQQLHGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTL----QNAPPGL 238
PE++ Y DIWS G E+ A F S+ + + TL + PG+
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 233
Query: 239 DYERDKR----------FSKSF-------KELVTACLVKDPKKRPTAEKLMKHHFFK 278
D + FSK + L++ L DP KR +A+ + H FF+
Sbjct: 234 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 290
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 140/297 (47%), Gaps = 35/297 (11%)
Query: 10 PVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR----REVQT 65
P ++++ E++GEG VY+A E+VA+K + L + + +G+ RE+
Sbjct: 1 PGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL---DTETEGVPSTAIREISL 57
Query: 66 MRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
++ NHPN+++ T + L++V ++ M ++ G P+I + L + L+
Sbjct: 58 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQ 116
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
L + H H +HRD+K N+LI++ GAIKLADFG++ G R+ V T + A
Sbjct: 117 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRA 173
Query: 186 PEVMQQLHGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTL----QNAPPGL 238
PE++ Y DIWS G E+ A F S+ + + TL + PG+
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 233
Query: 239 DYERDKR----------FSKSF-------KELVTACLVKDPKKRPTAEKLMKHHFFK 278
D + FSK + L++ L DP KR +A+ + H FF+
Sbjct: 234 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 290
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 122/242 (50%), Gaps = 16/242 (6%)
Query: 43 AIKVLDLE--KCNNDLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL 100
A+KV+ K D + + REVQ ++ +HPN+++ + F ++V GG
Sbjct: 55 AVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELF 114
Query: 101 HIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDS---NGAIKLAD 157
+ S + F E A ++R+ L + Y+H + +HRD+K N+L++S + I++ D
Sbjct: 115 DEIIS--RKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIID 172
Query: 158 FGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLHG-YDFKADIWSFGITALELAHGHA 216
FG+S F+A + + + +GT ++APEV LHG YD K D+WS G+ L G
Sbjct: 173 FGLST-HFEASKKMKDK---IGTAYYIAPEV---LHGTYDEKCDVWSTGVILYILLSGCP 225
Query: 217 PFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHF 276
PF+ + L ++ + + K+ S+S K+L+ L P R +A + H +
Sbjct: 226 PFNGANEYDI-LKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEW 284
Query: 277 FK 278
+
Sbjct: 285 IQ 286
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 122/242 (50%), Gaps = 16/242 (6%)
Query: 43 AIKVLDLE--KCNNDLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL 100
A+KV+ K D + + REVQ ++ +HPN+++ + F ++V GG
Sbjct: 78 AVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELF 137
Query: 101 HIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDS---NGAIKLAD 157
+ S + F E A ++R+ L + Y+H + +HRD+K N+L++S + I++ D
Sbjct: 138 DEIIS--RKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIID 195
Query: 158 FGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLHG-YDFKADIWSFGITALELAHGHA 216
FG+S F+A + + + +GT ++APEV LHG YD K D+WS G+ L G
Sbjct: 196 FGLST-HFEASKKMKDK---IGTAYYIAPEV---LHGTYDEKCDVWSTGVILYILLSGCP 248
Query: 217 PFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHF 276
PF+ + L ++ + + K+ S+S K+L+ L P R +A + H +
Sbjct: 249 PFNGANEYDI-LKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEW 307
Query: 277 FK 278
+
Sbjct: 308 IQ 309
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 129/277 (46%), Gaps = 15/277 (5%)
Query: 13 AKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNN-DLDGIRREVQTMRVTNH 71
A+ Y + +G+G V + + A+KV++ N D I REV+ ++ +H
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 72 PNVLRAHCSFTTGHCLWVVMPYMAGGSCL-HIMKSAYPEGFEEPVIATLLRETLKALVYL 130
PN+++ ++V GG I+K + F E A ++++ + Y+
Sbjct: 81 PNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKR---KRFSEHDAARIIKQVFSGITYM 137
Query: 131 HFHGHIHRDVKAGNILIDS---NGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPE 187
H H +HRD+K NIL++S + IK+ DFG+S C F + + R +GT ++APE
Sbjct: 138 HKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTC-FQQNTKMKDR---IGTAYYIAPE 193
Query: 188 VMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFS 247
V++ YD K D+WS G+ L G PF + L ++ D + + S
Sbjct: 194 VLRG--TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDI-LKRVETGKYAFDLPQWRTIS 250
Query: 248 KSFKELVTACLVKDPKKRPTAEKLMKHHFFKHARSND 284
K+L+ L P R TA + ++H + + S +
Sbjct: 251 DDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSSEE 287
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 140/293 (47%), Gaps = 35/293 (11%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR----REVQTMRVT 69
++++ E++GEG VY+A E+VA+K + L + + +G+ RE+ ++
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL---DTETEGVPSTAIREISLLKEL 60
Query: 70 NHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVY 129
NHPN+++ T + L++V +++ M ++ G P+I + L + L+ L +
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 130 LHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVM 189
H H +HRD+K N+LI++ GAIKLADFG++ G R+ V T + APE++
Sbjct: 120 CHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEIL 176
Query: 190 QQLHGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTL----QNAPPGLDYER 242
Y DIWS G E+ A F S+ + + TL + PG+
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 236
Query: 243 DKR----------FSKSF-------KELVTACLVKDPKKRPTAEKLMKHHFFK 278
D + FSK + L++ L DP KR +A+ + H FF+
Sbjct: 237 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 140/293 (47%), Gaps = 35/293 (11%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR----REVQTMRVT 69
++++ E++GEG VY+A E+VA+K + L + + +G+ RE+ ++
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL---DTETEGVPSTAIREISLLKEL 61
Query: 70 NHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVY 129
NHPN+++ T + L++V +++ M ++ G P+I + L + L+ L +
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 130 LHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVM 189
H H +HRD+K N+LI++ GAIKLADFG++ G R+ V T + APE++
Sbjct: 121 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEIL 177
Query: 190 QQLHGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTL----QNAPPGLDYER 242
Y DIWS G E+ A F S+ + + TL + PG+
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 237
Query: 243 DKR----------FSKSF-------KELVTACLVKDPKKRPTAEKLMKHHFFK 278
D + FSK + L++ L DP KR +A+ + H FF+
Sbjct: 238 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 290
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 132/271 (48%), Gaps = 23/271 (8%)
Query: 12 DAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNH 71
D D+R + +G G + V A ++VAIK + + + E+ + H
Sbjct: 18 DIYDFR--DVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKH 75
Query: 72 PNVLRAHCSFTTGHCLWVVMPYMAGGSCL-HIMKSAYPEGFEEPVIATLLRETLKALVYL 130
PN++ + +G L+++M ++GG I++ + + E + L+ + L A+ YL
Sbjct: 76 PNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF---YTERDASRLIFQVLDAVKYL 132
Query: 131 HFHGHIHRDVKAGNIL---IDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPE 187
H G +HRD+K N+L +D + I ++DFG+S M D G +T GTP ++APE
Sbjct: 133 HDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK-MEDPG---SVLSTACGTPGYVAPE 188
Query: 188 VMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRF- 246
V+ Q Y D WS G+ A L G+ PF K+ L+ +YE D +
Sbjct: 189 VLAQ-KPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKA-----EYEFDSPYW 242
Query: 247 ---SKSFKELVTACLVKDPKKRPTAEKLMKH 274
S S K+ + + KDP+KR T E+ ++H
Sbjct: 243 DDISDSAKDFIRHLMEKDPEKRFTCEQALQH 273
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 134/272 (49%), Gaps = 30/272 (11%)
Query: 16 YRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTM-RVTNHPNV 74
Y + E +G G + R + N A+KV+D K + E++ + R HPN+
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPS-----EEIEILLRYGQHPNI 83
Query: 75 LRAHCSFTTGHCLWVVMPYMAGGSCL-HIMKSAYPEGFEEPVIATLLRETLKALVYLHFH 133
+ + G +++V M GG L I++ + F E + +L K + YLH
Sbjct: 84 ITLKDVYDDGKHVYLVTELMRGGELLDKILRQKF---FSEREASFVLHTIGKTVEYLHSQ 140
Query: 134 GHIHRDVKAGNIL-IDSNG---AIKLADFGVSACMFDAGDRQRSRNTFVGTPCW----MA 185
G +HRD+K NIL +D +G +++ DFG + + R+ N + TPC+ +A
Sbjct: 141 GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQL-------RAENGLLMTPCYTANFVA 193
Query: 186 PEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYP---PMKVLLMTLQNAPPGLDYER 242
PEV+++ GYD DIWS GI + G+ PF+ P P ++ L + + L
Sbjct: 194 PEVLKR-QGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEI-LTRIGSGKFTLSGGN 251
Query: 243 DKRFSKSFKELVTACLVKDPKKRPTAEKLMKH 274
S++ K+LV+ L DP +R TA+++++H
Sbjct: 252 WNTVSETAKDLVSKMLHVDPHQRLTAKQVLQH 283
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 140/293 (47%), Gaps = 35/293 (11%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR----REVQTMRVT 69
++++ E++GEG VY+A E+VA+K + L + + +G+ RE+ ++
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL---DTETEGVPSTAIREISLLKEL 62
Query: 70 NHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVY 129
NHPN+++ T + L++V +++ M ++ G P+I + L + L+ L +
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 130 LHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVM 189
H H +HRD+K N+LI++ GAIKLADFG++ G R+ V T + APE++
Sbjct: 122 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEIL 178
Query: 190 QQLHGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTL----QNAPPGLDYER 242
Y DIWS G E+ A F S+ + + TL + PG+
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 238
Query: 243 DKR----------FSKSF-------KELVTACLVKDPKKRPTAEKLMKHHFFK 278
D + FSK + L++ L DP KR +A+ + H FF+
Sbjct: 239 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 140/297 (47%), Gaps = 35/297 (11%)
Query: 10 PVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR----REVQT 65
P ++++ E++GEG VY+A E+VA+K + L + + +G+ RE+
Sbjct: 6 PEFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL---DTETEGVPSTAIREISL 62
Query: 66 MRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
++ NHPN+++ T + L++V ++ M ++ G P+I + L + L+
Sbjct: 63 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQ 121
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
L + H H +HRD+K N+LI++ GAIKLADFG++ G R+ V T + A
Sbjct: 122 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRA 178
Query: 186 PEVMQQLHGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTL----QNAPPGL 238
PE++ Y DIWS G E+ A F S+ + + TL + PG+
Sbjct: 179 PEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 238
Query: 239 DYERDKR----------FSKSF-------KELVTACLVKDPKKRPTAEKLMKHHFFK 278
D + FSK + L++ L DP KR +A+ + H FF+
Sbjct: 239 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 295
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 142/297 (47%), Gaps = 35/297 (11%)
Query: 10 PVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR----REVQT 65
P ++++ E++GEG VY+A E+VA+K + L + + +G+ RE+
Sbjct: 1 PGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL---DTETEGVPSTAIREISL 57
Query: 66 MRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
++ NHPN+++ T + L++V ++ M ++ G P+I + L + L+
Sbjct: 58 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQ 116
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
L + H H +HRD+K N+LI++ GAIKLADFG++ G R+ V T + A
Sbjct: 117 GLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRA 173
Query: 186 PEVMQQLHGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTL----QNAPPGL 238
PE++ Y DIWS G E+ A F S+ + + TL + PG+
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 233
Query: 239 ----DYERD------KRFSKSF-------KELVTACLVKDPKKRPTAEKLMKHHFFK 278
DY+ + FSK + L++ L DP KR +A+ + H FF+
Sbjct: 234 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 290
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 140/293 (47%), Gaps = 35/293 (11%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR----REVQTMRVT 69
++++ E++GEG VY+A E+VA+K + L + + +G+ RE+ ++
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL---DTETEGVPSTAIREISLLKEL 62
Query: 70 NHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVY 129
NHPN+++ T + L++V +++ M ++ G P+I + L + L+ L +
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 130 LHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVM 189
H H +HRD+K N+LI++ GAIKLADFG++ G R+ V T + APE++
Sbjct: 122 CHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEIL 178
Query: 190 QQLHGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTL----QNAPPGLDYER 242
Y DIWS G E+ A F S+ + + TL + PG+
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 238
Query: 243 DKR----------FSKSF-------KELVTACLVKDPKKRPTAEKLMKHHFFK 278
D + FSK + L++ L DP KR +A+ + H FF+
Sbjct: 239 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 108/213 (50%), Gaps = 12/213 (5%)
Query: 11 VDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKC--NNDLDGIRREVQTMRV 68
V+ + + +G+G V ++ A+K ++ +KC N++ + +E+Q M+
Sbjct: 12 VNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQG 71
Query: 69 TNHPNVLRAHCSFTTGHCLWVVMPYMAGGSC-LHIMKSAYPEGFEEPVIATLLRETLKAL 127
HP ++ SF +++V+ + GG H+ ++ + F+E + + E + AL
Sbjct: 72 LEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVH---FKEETVKLFICELVMAL 128
Query: 128 VYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPE 187
YL IHRD+K NIL+D +G + + DF ++A + R+ T GT +MAPE
Sbjct: 129 DYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAML----PRETQITTMAGTKPYMAPE 184
Query: 188 VM--QQLHGYDFKADIWSFGITALELAHGHAPF 218
+ ++ GY F D WS G+TA EL G P+
Sbjct: 185 MFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPY 217
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 133/280 (47%), Gaps = 28/280 (10%)
Query: 20 EEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCN-NDLDGIRREVQTMRVTNHPNVLRAH 78
+ +G G TVY+ + VA+K+L++ L + EV +R T H N+L
Sbjct: 19 QRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LF 74
Query: 79 CSFTTGHCLWVVMPYMAGGSC---LHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGH 135
++T L +V + G S LHI+++ FE + + R+T + + YLH
Sbjct: 75 MGYSTKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLHAKSI 130
Query: 136 IHRDVKAGNILIDSNGAIKLADFGVSACMFD-AGDRQRSRNTFVGTPCWMAPEV--MQQL 192
IHRD+K+ NI + + +K+ DFG++ +G Q + G+ WMAPEV MQ
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ--LSGSILWMAPEVIRMQDK 188
Query: 193 HGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNA--PPGLDYERDKRFSKSF 250
+ Y F++D+++FGI EL G P+S ++ + P L R K+
Sbjct: 189 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSN-CPKAM 247
Query: 251 KELVTACLVKDPKKRPTAEKLMKHHFFKHARSNDFLARSI 290
K L+ CL K +RP +++ S + LARS+
Sbjct: 248 KRLMAECLKKKRDERPLFPQILA--------SIELLARSL 279
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 141/293 (48%), Gaps = 35/293 (11%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR----REVQTMRVT 69
++++ E++GEG VY+A E+VA+K + L + + +G+ RE+ ++
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL---DTETEGVPSTAIREISLLKEL 59
Query: 70 NHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVY 129
NHPN+++ T + L++V ++ M ++ G P+I + L + L+ L +
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 130 LHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVM 189
H H +HRD+K N+LI++ GAIKLADFG++ G R+ V T + APE++
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEIL 175
Query: 190 QQLHGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTL----QNAPPGL---- 238
Y DIWS G E+ A F S+ + + TL + PG+
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 235
Query: 239 DYERD------KRFSKSF-------KELVTACLVKDPKKRPTAEKLMKHHFFK 278
DY+ + FSK + L++ L DP KR +A+ + H FF+
Sbjct: 236 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 132/282 (46%), Gaps = 32/282 (11%)
Query: 20 EEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCN-NDLDGIRREVQTMRVTNHPNVLRAH 78
+ +G G TVY+ + VA+K+L++ L + EV +R T H N+L
Sbjct: 42 QRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LF 97
Query: 79 CSFTTGHCLWVVMPYMAGGSC---LHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGH 135
++T L +V + G S LHI+++ FE + + R+T + + YLH
Sbjct: 98 MGYSTKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLHAKSI 153
Query: 136 IHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTF---VGTPCWMAPEV--MQ 190
IHRD+K+ NI + + +K+ DFG++ R + F G+ WMAPEV MQ
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLAT----EKSRWSGSHQFEQLSGSILWMAPEVIRMQ 209
Query: 191 QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNA--PPGLDYERDKRFSK 248
+ Y F++D+++FGI EL G P+S ++ + P L R K
Sbjct: 210 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSN-CPK 268
Query: 249 SFKELVTACLVKDPKKRPTAEKLMKHHFFKHARSNDFLARSI 290
+ K L+ CL K +RP +++ S + LARS+
Sbjct: 269 AMKRLMAECLKKKRDERPLFPQILA--------SIELLARSL 302
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 133/280 (47%), Gaps = 28/280 (10%)
Query: 20 EEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCN-NDLDGIRREVQTMRVTNHPNVLRAH 78
+ +G G TVY+ + VA+K+L++ L + EV +R T H N+L
Sbjct: 16 QRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LF 71
Query: 79 CSFTTGHCLWVVMPYMAGGSC---LHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGH 135
++T L +V + G S LHI+++ FE + + R+T + + YLH
Sbjct: 72 MGYSTKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLHAKSI 127
Query: 136 IHRDVKAGNILIDSNGAIKLADFGVSACMFD-AGDRQRSRNTFVGTPCWMAPEV--MQQL 192
IHRD+K+ NI + + +K+ DFG++ +G Q + G+ WMAPEV MQ
Sbjct: 128 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ--LSGSILWMAPEVIRMQDK 185
Query: 193 HGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNA--PPGLDYERDKRFSKSF 250
+ Y F++D+++FGI EL G P+S ++ + P L R K+
Sbjct: 186 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSN-CPKAM 244
Query: 251 KELVTACLVKDPKKRPTAEKLMKHHFFKHARSNDFLARSI 290
K L+ CL K +RP +++ S + LARS+
Sbjct: 245 KRLMAECLKKKRDERPLFPQILA--------SIELLARSL 276
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 126/261 (48%), Gaps = 20/261 (7%)
Query: 16 YRLYEEVGEGVSATVYRALCIPLNEIVAIKVL--DLEKCNNDLDGIRREVQTMRVTNHPN 73
Y L E +G G + V+ A + L+ VA+KVL DL + + RRE Q NHP
Sbjct: 31 YELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPA 90
Query: 74 VLRAH----CSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIAT-LLRETLKALV 128
++ + G ++VM Y+ G + I+ + EG P A ++ + +AL
Sbjct: 91 IVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT---EGPMTPKRAIEVIADACQALN 147
Query: 129 YLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEV 188
+ H +G IHRDVK NI+I + A+K+ DFG++ + D+G+ +GT +++PE
Sbjct: 148 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE- 206
Query: 189 MQQLHG--YDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQN--APPGLDYERDK 244
Q G D ++D++S G E+ G PF+ P+ V ++ PP R +
Sbjct: 207 --QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPS---ARHE 261
Query: 245 RFSKSFKELVTACLVKDPKKR 265
S +V L K+P+ R
Sbjct: 262 GLSADLDAVVLKALAKNPENR 282
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 139/293 (47%), Gaps = 35/293 (11%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR----REVQTMRVT 69
++++ E++GEG VY+A E+VA+K + L + + +G+ RE+ ++
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL---DTETEGVPSTAIREISLLKEL 60
Query: 70 NHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVY 129
NHPN+++ T + L++V ++ M ++ G P+I + L + L+ L +
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 130 LHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVM 189
H H +HRD+K N+LI++ GAIKLADFG++ G R+ V T + APE++
Sbjct: 120 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRAPEIL 176
Query: 190 QQLHGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTL----QNAPPGLDYER 242
Y DIWS G E+ A F S+ + + TL + PG+
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 236
Query: 243 DKR----------FSKSF-------KELVTACLVKDPKKRPTAEKLMKHHFFK 278
D + FSK + L++ L DP KR +A+ + H FF+
Sbjct: 237 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 140/297 (47%), Gaps = 35/297 (11%)
Query: 10 PVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR----REVQT 65
P ++++ E++GEG VY+A E+VA+K + L + + +G+ RE+
Sbjct: 2 PGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL---DTETEGVPSTAIREISL 58
Query: 66 MRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
++ NHPN+++ T + L++V ++ M ++ G P+I + L + L+
Sbjct: 59 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKTFMDASALTGIPLPLIKSYLFQLLQ 117
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
L + H H +HRD+K N+LI++ GAIKLADFG++ G R+ V T + A
Sbjct: 118 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRA 174
Query: 186 PEVMQQLHGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTL----QNAPPGL 238
PE++ Y DIWS G E+ A F S+ + + TL + PG+
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 234
Query: 239 DYERDKR----------FSKSF-------KELVTACLVKDPKKRPTAEKLMKHHFFK 278
D + FSK + L++ L DP KR +A+ + H FF+
Sbjct: 235 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 141/293 (48%), Gaps = 35/293 (11%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR----REVQTMRVT 69
++++ E++GEG VY+A E+VA+K + L + + +G+ RE+ ++
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL---DTETEGVPSTAIREISLLKEL 59
Query: 70 NHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVY 129
NHPN+++ T + L++V ++ M ++ G P+I + L + L+ L +
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 130 LHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVM 189
H H +HRD+K N+LI++ GAIKLADFG++ G R+ V T + APE++
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRAPEIL 175
Query: 190 QQLHGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTL----QNAPPGL---- 238
Y DIWS G E+ A F S+ + + TL + PG+
Sbjct: 176 LGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 235
Query: 239 DYERD------KRFSKSF-------KELVTACLVKDPKKRPTAEKLMKHHFFK 278
DY+ + FSK + L++ L DP KR +A+ + H FF+
Sbjct: 236 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 128/275 (46%), Gaps = 15/275 (5%)
Query: 13 AKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNN-DLDGIRREVQTMRVTNH 71
A+ Y + +G+G V + + A+KV++ N D I REV+ ++ +H
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 72 PNVLRAHCSFTTGHCLWVVMPYMAGGSCL-HIMKSAYPEGFEEPVIATLLRETLKALVYL 130
PN+++ ++V GG I+K + F E A ++++ + Y+
Sbjct: 81 PNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKR---KRFSEHDAARIIKQVFSGITYM 137
Query: 131 HFHGHIHRDVKAGNILIDS---NGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPE 187
H H +HRD+K NIL++S + IK+ DFG+S C F + + R +GT ++APE
Sbjct: 138 HKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTC-FQQNTKMKDR---IGTAYYIAPE 193
Query: 188 VMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFS 247
V++ YD K D+WS G+ L G PF + L ++ D + + S
Sbjct: 194 VLRG--TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDI-LKRVETGKYAFDLPQWRTIS 250
Query: 248 KSFKELVTACLVKDPKKRPTAEKLMKHHFFKHARS 282
K+L+ L P R TA + ++H + + S
Sbjct: 251 DDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSS 285
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 128/283 (45%), Gaps = 28/283 (9%)
Query: 9 FPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVL-------DLEKCNNDLDGIRR 61
F V A D E+G G V + +P +I A+K + + ++ DLD
Sbjct: 29 FEVKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLD---- 84
Query: 62 EVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEG--FEEPVIATL 119
+ R + P + + + +W+ + S K +G E ++ +
Sbjct: 85 --ISXRTVDCPFTVTFYGALFREGDVWICXE-LXDTSLDKFYKQVIDKGQTIPEDILGKI 141
Query: 120 LRETLKALVYLHFH-GHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFV 178
+KAL +LH IHRDVK N+LI++ G +K DFG+S + D +++
Sbjct: 142 AVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVD----DVAKDIDA 197
Query: 179 GTPCWMAPEVMQ---QLHGYDFKADIWSFGITALELAHGHAPFSKY-PPMKVLLMTLQNA 234
G + APE + GY K+DIWS GIT +ELA P+ + P + L ++
Sbjct: 198 GCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVEEP 257
Query: 235 PPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFF 277
P L + +FS F + + CL K+ K+RPT +L +H FF
Sbjct: 258 SPQLPAD---KFSAEFVDFTSQCLKKNSKERPTYPELXQHPFF 297
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 132/282 (46%), Gaps = 32/282 (11%)
Query: 20 EEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCN-NDLDGIRREVQTMRVTNHPNVLRAH 78
+ +G G TVY+ + VA+K+L++ L + EV +R T H N+L
Sbjct: 34 QRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LF 89
Query: 79 CSFTTGHCLWVVMPYMAGGSC---LHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGH 135
++T L +V + G S LHI+++ FE + + R+T + + YLH
Sbjct: 90 MGYSTKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLHAKSI 145
Query: 136 IHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTF---VGTPCWMAPEV--MQ 190
IHRD+K+ NI + + +K+ DFG++ R + F G+ WMAPEV MQ
Sbjct: 146 IHRDLKSNNIFLHEDLTVKIGDFGLAT----EKSRWSGSHQFEQLSGSILWMAPEVIRMQ 201
Query: 191 QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNA--PPGLDYERDKRFSK 248
+ Y F++D+++FGI EL G P+S ++ + P L R K
Sbjct: 202 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSN-CPK 260
Query: 249 SFKELVTACLVKDPKKRPTAEKLMKHHFFKHARSNDFLARSI 290
+ K L+ CL K +RP +++ S + LARS+
Sbjct: 261 AMKRLMAECLKKKRDERPLFPQILA--------SIELLARSL 294
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 140/297 (47%), Gaps = 35/297 (11%)
Query: 10 PVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR----REVQT 65
P ++++ E++GEG VY+A E+VA+K + L + + +G+ RE+
Sbjct: 6 PEFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL---DTETEGVPSTAIREISL 62
Query: 66 MRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
++ NHPN+++ T + L++V ++ M ++ G P+I + L + L+
Sbjct: 63 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQ 121
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
L + H H +HRD+K N+LI++ GAIKLADFG++ G R+ V T + A
Sbjct: 122 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRA 178
Query: 186 PEVMQQLHGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTL----QNAPPGL 238
PE++ Y DIWS G E+ A F S+ + + TL + PG+
Sbjct: 179 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 238
Query: 239 DYERDKR----------FSKSF-------KELVTACLVKDPKKRPTAEKLMKHHFFK 278
D + FSK + L++ L DP KR +A+ + H FF+
Sbjct: 239 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 295
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 141/293 (48%), Gaps = 35/293 (11%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR----REVQTMRVT 69
++++ E++GEG VY+A E+VA+K + L + + +G+ RE+ ++
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL---DTETEGVPSTAIREISLLKEL 58
Query: 70 NHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVY 129
NHPN+++ T + L++V ++ M ++ G P+I + L + L+ L +
Sbjct: 59 NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 130 LHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVM 189
H H +HRD+K N+LI++ GAIKLADFG++ G R+ V T + APE++
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRAPEIL 174
Query: 190 QQLHGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTL----QNAPPGL---- 238
Y DIWS G E+ A F S+ + + TL + PG+
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 234
Query: 239 DYERD------KRFSKSF-------KELVTACLVKDPKKRPTAEKLMKHHFFK 278
DY+ + FSK + L++ L DP KR +A+ + H FF+
Sbjct: 235 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 131/263 (49%), Gaps = 12/263 (4%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCN-NDLDGIRREVQTMRVTNHPN 73
+Y + EE+G+G + V R + A K+++ +K + D + RE + R HPN
Sbjct: 30 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPN 89
Query: 74 VLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFH 133
++R H S ++V + GG + + E + E + +++ L+++ Y H +
Sbjct: 90 IVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR--EFYSEADASHCIQQILESIAYCHSN 147
Query: 134 GHIHRDVKAGNILIDSN---GAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
G +HR++K N+L+ S A+KLADFG++ + D+ + + F GTP +++PEV++
Sbjct: 148 GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS----EAWHGFAGTPGYLSPEVLK 203
Query: 191 QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSF 250
+ Y DIW+ G+ L G+ PF ++ A E D +
Sbjct: 204 K-DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDT-VTPEA 261
Query: 251 KELVTACLVKDPKKRPTAEKLMK 273
K L+ + L +PKKR TA++ +K
Sbjct: 262 KSLIDSMLTVNPKKRITADQALK 284
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 133/280 (47%), Gaps = 28/280 (10%)
Query: 20 EEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCN-NDLDGIRREVQTMRVTNHPNVLRAH 78
+ +G G TVY+ + VA+K+L++ L + EV +R T H N+L
Sbjct: 14 QRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LF 69
Query: 79 CSFTTGHCLWVVMPYMAGGSC---LHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGH 135
++T L +V + G S LHI+++ FE + + R+T + + YLH
Sbjct: 70 MGYSTKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLHAKSI 125
Query: 136 IHRDVKAGNILIDSNGAIKLADFGVSACMFD-AGDRQRSRNTFVGTPCWMAPEV--MQQL 192
IHRD+K+ NI + + +K+ DFG++ +G Q + G+ WMAPEV MQ
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ--LSGSILWMAPEVIRMQDK 183
Query: 193 HGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNA--PPGLDYERDKRFSKSF 250
+ Y F++D+++FGI EL G P+S ++ + P L R K+
Sbjct: 184 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSN-CPKAM 242
Query: 251 KELVTACLVKDPKKRPTAEKLMKHHFFKHARSNDFLARSI 290
K L+ CL K +RP +++ S + LARS+
Sbjct: 243 KRLMAECLKKKRDERPLFPQILA--------SIELLARSL 274
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 131/277 (47%), Gaps = 35/277 (12%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVL---DLEKCNNDLDGIRREVQTMRVTN 70
+D+ + +G+G VY A I+A+KVL LEK + +RREV+
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVE-HQLRREVEIQSHLR 70
Query: 71 HPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYL 130
HPN+LR + F +++++ Y G+ ++ F+E AT + E AL Y
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SRFDEQRTATYITELANALSYC 128
Query: 131 HFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
H IHRD+K N+L+ SNG +K+ADFG S + R+T GT ++ PE+++
Sbjct: 129 HSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSS-----RRDTLCGTLDYLPPEMIE 183
Query: 191 -QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKS 249
++H D K D+WS G+ E G PF + T Q Y R R +
Sbjct: 184 GRMH--DEKVDLWSLGVLCYEFLVGMPPFEAH--------TYQET-----YRRISRVEFT 228
Query: 250 F--------KELVTACLVKDPKKRPTAEKLMKHHFFK 278
F ++L++ L + +R T ++++H + K
Sbjct: 229 FPDFVTEGARDLISRLLKHNASQRLTLAEVLEHPWIK 265
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 128/273 (46%), Gaps = 35/273 (12%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVL---DLEKCNNDLDGIRREVQTMRVTN 70
+D+ + +G+G VY A I+A+KVL LEK + +RREV+
Sbjct: 10 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLR 68
Query: 71 HPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYL 130
HPN+LR + F +++++ Y G+ ++ F+E AT + E AL Y
Sbjct: 69 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYC 126
Query: 131 HFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
H IHRD+K N+L+ S G +K+A+FG S + R T GT ++ PE+++
Sbjct: 127 HSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSS-----RRTTLCGTLDYLPPEMIE 181
Query: 191 -QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKS 249
++H D K D+WS G+ E G PF T Q Y+R R +
Sbjct: 182 GRMH--DEKVDLWSLGVLCYEFLVGKPPFEA--------NTYQET-----YKRISRVEFT 226
Query: 250 F--------KELVTACLVKDPKKRPTAEKLMKH 274
F ++L++ L +P +RP ++++H
Sbjct: 227 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 259
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 139/293 (47%), Gaps = 35/293 (11%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR----REVQTMRVT 69
++++ E++GEG VY+A E+VA+K + L + + +G+ RE+ ++
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL---DTETEGVPSTAIREISLLKEL 59
Query: 70 NHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVY 129
NHPN+++ T + L++V ++ M ++ G P+I + L + L+ L +
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 130 LHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVM 189
H H +HRD+K N+LI++ GAIKLADFG++ G R+ V T + APE++
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRAPEIL 175
Query: 190 QQLHGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTL----QNAPPGLDYER 242
Y DIWS G E+ A F S+ + + TL + PG+
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 235
Query: 243 DKR----------FSKSF-------KELVTACLVKDPKKRPTAEKLMKHHFFK 278
D + FSK + L++ L DP KR +A+ + H FF+
Sbjct: 236 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 139/293 (47%), Gaps = 35/293 (11%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR----REVQTMRVT 69
++++ E++GEG VY+A E+VA+K + L + + +G+ RE+ ++
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL---DTETEGVPSTAIREISLLKEL 59
Query: 70 NHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVY 129
NHPN+++ T + L++V ++ M ++ G P+I + L + L+ L +
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 130 LHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVM 189
H H +HRD+K N+LI++ GAIKLADFG++ G R+ V T + APE++
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRAPEIL 175
Query: 190 QQLHGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTL----QNAPPGLDYER 242
Y DIWS G E+ A F S+ + + TL + PG+
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 235
Query: 243 DKR----------FSKSF-------KELVTACLVKDPKKRPTAEKLMKHHFFK 278
D + FSK + L++ L DP KR +A+ + H FF+
Sbjct: 236 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 139/293 (47%), Gaps = 35/293 (11%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR----REVQTMRVT 69
++++ E++GEG VY+A E+VA+K + L + + +G+ RE+ ++
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL---DTETEGVPSTAIREISLLKEL 58
Query: 70 NHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVY 129
NHPN+++ T + L++V ++ M ++ G P+I + L + L+ L +
Sbjct: 59 NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 130 LHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVM 189
H H +HRD+K N+LI++ GAIKLADFG++ G R+ V T + APE++
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRAPEIL 174
Query: 190 QQLHGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTL----QNAPPGLDYER 242
Y DIWS G E+ A F S+ + + TL + PG+
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 234
Query: 243 DKR----------FSKSF-------KELVTACLVKDPKKRPTAEKLMKHHFFK 278
D + FSK + L++ L DP KR +A+ + H FF+
Sbjct: 235 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 141/293 (48%), Gaps = 35/293 (11%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR----REVQTMRVT 69
++++ E++GEG VY+A E+VA+K + L + + +G+ RE+ ++
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL---DTETEGVPSTAIREISLLKEL 59
Query: 70 NHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVY 129
NHPN+++ T + L++V ++ M ++ G P+I + L + L+ L +
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 130 LHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVM 189
H H +HRD+K N+LI++ GAIKLADFG++ G R+ V T + APE++
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEIL 175
Query: 190 QQLHGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTL----QNAPPGL---- 238
Y DIWS G E+ A F S+ + + TL + PG+
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 235
Query: 239 DYERD------KRFSKSF-------KELVTACLVKDPKKRPTAEKLMKHHFFK 278
DY+ + FSK + L++ L DP KR +A+ + H FF+
Sbjct: 236 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 139/293 (47%), Gaps = 35/293 (11%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR----REVQTMRVT 69
++++ E++GEG VY+A E+VA+K + L + + +G+ RE+ ++
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL---DTETEGVPSTAIREISLLKEL 60
Query: 70 NHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVY 129
NHPN+++ T + L++V ++ M ++ G P+I + L + L+ L +
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 130 LHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVM 189
H H +HRD+K N+LI++ GAIKLADFG++ G R+ V T + APE++
Sbjct: 120 CHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEIL 176
Query: 190 QQLHGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTL----QNAPPGLDYER 242
Y DIWS G E+ A F S+ + + TL + PG+
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 236
Query: 243 DKR----------FSKSF-------KELVTACLVKDPKKRPTAEKLMKHHFFK 278
D + FSK + L++ L DP KR +A+ + H FF+
Sbjct: 237 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 141/293 (48%), Gaps = 35/293 (11%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR----REVQTMRVT 69
++++ E++GEG VY+A E+VA+K + L + + +G+ RE+ ++
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL---DTETEGVPSTAIREISLLKEL 59
Query: 70 NHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVY 129
NHPN+++ T + L++V ++ M ++ G P+I + L + L+ L +
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 130 LHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVM 189
H H +HRD+K N+LI++ GAIKLADFG++ G R+ V T + APE++
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEIL 175
Query: 190 QQLHGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTL----QNAPPGL---- 238
Y DIWS G E+ A F S+ + + TL + PG+
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 235
Query: 239 DYERD------KRFSKSF-------KELVTACLVKDPKKRPTAEKLMKHHFFK 278
DY+ + FSK + L++ L DP KR +A+ + H FF+
Sbjct: 236 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 139/293 (47%), Gaps = 35/293 (11%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR----REVQTMRVT 69
++++ E++GEG VY+A E+VA+K + L + + +G+ RE+ ++
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL---DTETEGVPSTAIREISLLKEL 62
Query: 70 NHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVY 129
NHPN+++ T + L++V ++ M ++ G P+I + L + L+ L +
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 130 LHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVM 189
H H +HRD+K N+LI++ GAIKLADFG++ G R+ V T + APE++
Sbjct: 122 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEIL 178
Query: 190 QQLHGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTL----QNAPPGLDYER 242
Y DIWS G E+ A F S+ + + TL + PG+
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 238
Query: 243 DKR----------FSKSF-------KELVTACLVKDPKKRPTAEKLMKHHFFK 278
D + FSK + L++ L DP KR +A+ + H FF+
Sbjct: 239 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 125/261 (47%), Gaps = 20/261 (7%)
Query: 16 YRLYEEVGEGVSATVYRALCIPLNEIVAIKVL--DLEKCNNDLDGIRREVQTMRVTNHPN 73
Y L E +G G + V+ A + + VA+KVL DL + + RRE Q NHP
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPA 73
Query: 74 VLRAH----CSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIAT-LLRETLKALV 128
++ + G ++VM Y+ G + I+ + EG P A ++ + +AL
Sbjct: 74 IVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT---EGPMTPKRAIEVIADACQALN 130
Query: 129 YLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEV 188
+ H +G IHRDVK NILI + A+K+ DFG++ + D+G+ +GT +++PE
Sbjct: 131 FSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPE- 189
Query: 189 MQQLHG--YDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQN--APPGLDYERDK 244
Q G D ++D++S G E+ G PF+ P+ V ++ PP R +
Sbjct: 190 --QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPS---ARHE 244
Query: 245 RFSKSFKELVTACLVKDPKKR 265
S +V L K+P+ R
Sbjct: 245 GLSADLDAVVLKALAKNPENR 265
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 139/293 (47%), Gaps = 35/293 (11%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR----REVQTMRVT 69
++++ E++GEG VY+A E+VA+K + L + + +G+ RE+ ++
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL---DTETEGVPSTAIREISLLKEL 60
Query: 70 NHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVY 129
NHPN+++ T + L++V ++ M ++ G P+I + L + L+ L +
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 130 LHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVM 189
H H +HRD+K N+LI++ GAIKLADFG++ G R+ V T + APE++
Sbjct: 120 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEIL 176
Query: 190 QQLHGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTL----QNAPPGLDYER 242
Y DIWS G E+ A F S+ + + TL + PG+
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 236
Query: 243 DKR----------FSKSF-------KELVTACLVKDPKKRPTAEKLMKHHFFK 278
D + FSK + L++ L DP KR +A+ + H FF+
Sbjct: 237 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 139/293 (47%), Gaps = 35/293 (11%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR----REVQTMRVT 69
++++ E++GEG VY+A E+VA+K + L + + +G+ RE+ ++
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL---DTETEGVPSTAIREISLLKEL 58
Query: 70 NHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVY 129
NHPN+++ T + L++V ++ M ++ G P+I + L + L+ L +
Sbjct: 59 NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 130 LHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVM 189
H H +HRD+K N+LI++ GAIKLADFG++ G R+ V T + APE++
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEIL 174
Query: 190 QQLHGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTL----QNAPPGLDYER 242
Y DIWS G E+ A F S+ + + TL + PG+
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 234
Query: 243 DKR----------FSKSF-------KELVTACLVKDPKKRPTAEKLMKHHFFK 278
D + FSK + L++ L DP KR +A+ + H FF+
Sbjct: 235 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 126/273 (46%), Gaps = 35/273 (12%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVL---DLEKCNNDLDGIRREVQTMRVTN 70
+D+ + +G+G VY A I+A+KVL LEK + +RREV+
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLR 71
Query: 71 HPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYL 130
HPN+LR + F +++++ Y G ++ F+E AT + E AL Y
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKL--SKFDEQRTATYITELANALSYC 129
Query: 131 HFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
H IHRD+K N+L+ S G +K+ADFG S + R GT ++ PE+++
Sbjct: 130 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRXXLXGTLDYLPPEMIE 184
Query: 191 -QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKS 249
++H D K D+WS G+ E G PF T Q Y+R R +
Sbjct: 185 GRMH--DEKVDLWSLGVLCYEFLVGKPPFEA--------NTYQET-----YKRISRVEFT 229
Query: 250 F--------KELVTACLVKDPKKRPTAEKLMKH 274
F ++L++ L +P +RP ++++H
Sbjct: 230 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 262
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 128/273 (46%), Gaps = 35/273 (12%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVL---DLEKCNNDLDGIRREVQTMRVTN 70
+D+ + +G+G VY A I+A+KVL LEK + +RREV+
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLR 69
Query: 71 HPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYL 130
HPN+LR + F +++++ Y G+ ++ F+E AT + E AL Y
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYC 127
Query: 131 HFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
H IHRD+K N+L+ S G +K+ADFG S + R+ GT ++ PE+++
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRDDLCGTLDYLPPEMIE 182
Query: 191 -QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKS 249
++H D K D+WS G+ E G PF T Q Y+R R +
Sbjct: 183 GRMH--DEKVDLWSLGVLCYEFLVGKPPFEA--------NTYQET-----YKRISRVEFT 227
Query: 250 F--------KELVTACLVKDPKKRPTAEKLMKH 274
F ++L++ L +P +RP ++++H
Sbjct: 228 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 260
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 132/282 (46%), Gaps = 32/282 (11%)
Query: 20 EEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCN-NDLDGIRREVQTMRVTNHPNVLRAH 78
+ +G G TVY+ + VA+K+L++ L + EV +R T H N+L
Sbjct: 14 QRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LF 69
Query: 79 CSFTTGHCLWVVMPYMAGGSC---LHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGH 135
++T L +V + G S LHI+++ FE + + R+T + + YLH
Sbjct: 70 MGYSTKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLHAKSI 125
Query: 136 IHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTF---VGTPCWMAPEV--MQ 190
IHRD+K+ NI + + +K+ DFG++ R + F G+ WMAPEV MQ
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLAT----EKSRWSGSHQFEQLSGSILWMAPEVIRMQ 181
Query: 191 QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNA--PPGLDYERDKRFSK 248
+ Y F++D+++FGI EL G P+S ++ + P L R K
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSN-CPK 240
Query: 249 SFKELVTACLVKDPKKRPTAEKLMKHHFFKHARSNDFLARSI 290
+ K L+ CL K +RP +++ S + LARS+
Sbjct: 241 AMKRLMAECLKKKRDERPLFPQILA--------SIELLARSL 274
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 130/272 (47%), Gaps = 15/272 (5%)
Query: 16 YRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVL 75
+ + E+G G ++ VYR + A+KVL K D +R E+ + +HPN++
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVL---KKTVDKKIVRTEIGVLLRLSHPNII 111
Query: 76 RAHCSFTTGHCLWVVMPYMAGGSCL-HIMKSAYPEGFEEPVIATLLRETLKALVYLHFHG 134
+ F T + +V+ + GG I++ Y + E A +++ L+A+ YLH +G
Sbjct: 112 KLKEIFETPTEISLVLELVTGGELFDRIVEKGY---YSERDAADAVKQILEAVAYLHENG 168
Query: 135 HIHRDVKAGNILIDS---NGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQ 191
+HRD+K N+L + + +K+ADFG+S + + Q T GTP + APE+++
Sbjct: 169 IVHRDLKPENLLYATPAPDAPLKIADFGLSKIV----EHQVLMKTVCGTPGYCAPEILRG 224
Query: 192 LHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFK 251
Y + D+WS GI L G PF + + + N S + K
Sbjct: 225 C-AYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAK 283
Query: 252 ELVTACLVKDPKKRPTAEKLMKHHFFKHARSN 283
+LV +V DPKKR T + ++H + +N
Sbjct: 284 DLVRKLIVLDPKKRLTTFQALQHPWVTGKAAN 315
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 139/293 (47%), Gaps = 35/293 (11%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR----REVQTMRVT 69
++++ E++GEG VY+A E+VA+K + L + + +G+ RE+ ++
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL---DTETEGVPSTAIREISLLKEL 63
Query: 70 NHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVY 129
NHPN+++ T + L++V ++ M ++ G P+I + L + L+ L +
Sbjct: 64 NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 122
Query: 130 LHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVM 189
H H +HRD+K N+LI++ GAIKLADFG++ G R+ V T + APE++
Sbjct: 123 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEIL 179
Query: 190 QQLHGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTL----QNAPPGLDYER 242
Y DIWS G E+ A F S+ + + TL + PG+
Sbjct: 180 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 239
Query: 243 DKR----------FSKSF-------KELVTACLVKDPKKRPTAEKLMKHHFFK 278
D + FSK + L++ L DP KR +A+ + H FF+
Sbjct: 240 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 292
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 139/293 (47%), Gaps = 35/293 (11%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR----REVQTMRVT 69
++++ E++GEG VY+A E+VA+K + L + + +G+ RE+ ++
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL---DTETEGVPSTAIREISLLKEL 60
Query: 70 NHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVY 129
NHPN+++ T + L++V ++ M ++ G P+I + L + L+ L +
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 130 LHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVM 189
H H +HRD+K N+LI++ GAIKLADFG++ G R+ V T + APE++
Sbjct: 120 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEIL 176
Query: 190 QQLHGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTL----QNAPPGLDYER 242
Y DIWS G E+ A F S+ + + TL + PG+
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 236
Query: 243 DKR----------FSKSF-------KELVTACLVKDPKKRPTAEKLMKHHFFK 278
D + FSK + L++ L DP KR +A+ + H FF+
Sbjct: 237 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 140/297 (47%), Gaps = 35/297 (11%)
Query: 10 PVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR----REVQT 65
P ++++ E++GEG VY+A E+VA+K + L + + +G+ RE+
Sbjct: 2 PGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL---DTETEGVPSTAIREISL 58
Query: 66 MRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
++ NHPN+++ T + L++V ++ M ++ G P+I + L + L+
Sbjct: 59 LKELNHPNIVKLLDVIHTENKLYLVFEHV-DQDLKKFMDASALTGIPLPLIKSYLFQLLQ 117
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
L + H H +HRD+K N+LI++ GAIKLADFG++ G R+ V T + A
Sbjct: 118 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRA 174
Query: 186 PEVMQQLHGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTL----QNAPPGL 238
PE++ Y DIWS G E+ A F S+ + + TL + PG+
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 234
Query: 239 DYERDKR----------FSKSF-------KELVTACLVKDPKKRPTAEKLMKHHFFK 278
D + FSK + L++ L DP KR +A+ + H FF+
Sbjct: 235 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 141/293 (48%), Gaps = 35/293 (11%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR----REVQTMRVT 69
++++ E++GEG VY+A E+VA+K + L + + +G+ RE+ ++
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL---DTETEGVPSTAIREISLLKEL 58
Query: 70 NHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVY 129
NHPN+++ T + L++V ++ M ++ G P+I + L + L+ L +
Sbjct: 59 NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 130 LHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVM 189
H H +HRD+K N+LI++ GAIKLADFG++ G R+ V T + APE++
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEIL 174
Query: 190 QQLHGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTL----QNAPPGL---- 238
Y DIWS G E+ A F S+ + + TL + PG+
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 234
Query: 239 DYERD------KRFSKSF-------KELVTACLVKDPKKRPTAEKLMKHHFFK 278
DY+ + FSK + L++ L DP KR +A+ + H FF+
Sbjct: 235 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 127/273 (46%), Gaps = 35/273 (12%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVL---DLEKCNNDLDGIRREVQTMRVTN 70
+D+ + +G+G VY A I+A+KVL LEK + +RREV+
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLR 66
Query: 71 HPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYL 130
HPN+LR + F +++++ Y G+ ++ F+E AT + E AL Y
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYC 124
Query: 131 HFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
H IHRD+K N+L+ S G +K+ADFG S + R GT ++ PE+++
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRTELCGTLDYLPPEMIE 179
Query: 191 -QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKS 249
++H D K D+WS G+ E G PF T Q Y+R R +
Sbjct: 180 GRMH--DEKVDLWSLGVLCYEFLVGKPPFEA--------NTYQET-----YKRISRVEFT 224
Query: 250 F--------KELVTACLVKDPKKRPTAEKLMKH 274
F ++L++ L +P +RP ++++H
Sbjct: 225 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 257
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 128/273 (46%), Gaps = 35/273 (12%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVL---DLEKCNNDLDGIRREVQTMRVTN 70
+D+ + +G+G VY A I+A+KVL LEK + +RREV+
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLR 69
Query: 71 HPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYL 130
HPN+LR + F +++++ Y G+ ++ F+E AT + E AL Y
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYC 127
Query: 131 HFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
H IHRD+K N+L+ S G +K+A+FG S + R T GT ++ PE+++
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSS-----RRTTLCGTLDYLPPEMIE 182
Query: 191 -QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKS 249
++H D K D+WS G+ E G PF T Q Y+R R +
Sbjct: 183 GRMH--DEKVDLWSLGVLCYEFLVGKPPFEA--------NTYQET-----YKRISRVEFT 227
Query: 250 F--------KELVTACLVKDPKKRPTAEKLMKH 274
F ++L++ L +P +RP ++++H
Sbjct: 228 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 260
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 139/293 (47%), Gaps = 35/293 (11%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR----REVQTMRVT 69
++++ E++GEG VY+A E+VA+K + L + + +G+ RE+ ++
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL---DTETEGVPSTAIREISLLKEL 59
Query: 70 NHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVY 129
NHPN+++ T + L++V ++ M ++ G P+I + L + L+ L +
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 130 LHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVM 189
H H +HRD+K N+LI++ GAIKLADFG++ G R+ V T + APE++
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEIL 175
Query: 190 QQLHGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTL----QNAPPGLDYER 242
Y DIWS G E+ A F S+ + + TL + PG+
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 235
Query: 243 DKR----------FSKSF-------KELVTACLVKDPKKRPTAEKLMKHHFFK 278
D + FSK + L++ L DP KR +A+ + H FF+
Sbjct: 236 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 130/277 (46%), Gaps = 35/277 (12%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVL---DLEKCNNDLDGIRREVQTMRVTN 70
+D+ + +G+G VY A I+A+KVL LEK + +RREV+
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVE-HQLRREVEIQSHLR 70
Query: 71 HPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYL 130
HPN+LR + F +++++ Y G+ ++ F+E AT + E AL Y
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SRFDEQRTATYITELANALSYC 128
Query: 131 HFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
H IHRD+K N+L+ SNG +K+ADFG S + R T GT ++ PE+++
Sbjct: 129 HSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSS-----RRTTLCGTLDYLPPEMIE 183
Query: 191 -QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKS 249
++H D K D+WS G+ E G PF + T Q Y R R +
Sbjct: 184 GRMH--DEKVDLWSLGVLCYEFLVGMPPFEAH--------TYQET-----YRRISRVEFT 228
Query: 250 F--------KELVTACLVKDPKKRPTAEKLMKHHFFK 278
F ++L++ L + +R T ++++H + K
Sbjct: 229 FPDFVTEGARDLISRLLKHNASQRLTLAEVLEHPWIK 265
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 127/273 (46%), Gaps = 35/273 (12%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVL---DLEKCNNDLDGIRREVQTMRVTN 70
+D+ + +G+G VY A I+A+KVL LEK + +RREV+
Sbjct: 10 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLR 68
Query: 71 HPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYL 130
HPN+LR + F +++++ Y G+ ++ F+E AT + E AL Y
Sbjct: 69 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYC 126
Query: 131 HFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
H IHRD+K N+L+ S G +K+ADFG S + R GT ++ PE+++
Sbjct: 127 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRXXLCGTLDYLPPEMIE 181
Query: 191 -QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKS 249
++H D K D+WS G+ E G PF T Q Y+R R +
Sbjct: 182 GRMH--DEKVDLWSLGVLCYEFLVGKPPFEA--------NTYQET-----YKRISRVEFT 226
Query: 250 F--------KELVTACLVKDPKKRPTAEKLMKH 274
F ++L++ L +P +RP ++++H
Sbjct: 227 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 259
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 124/242 (51%), Gaps = 19/242 (7%)
Query: 42 VAIKVLDLEKCNN-DLDG-IRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSC 99
VA+K+L+ +K + D+ G IRRE+Q +++ HP++++ + +T +++VM Y++GG
Sbjct: 44 VAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGEL 103
Query: 100 L-HIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADF 158
+I K+ +E L ++ L + Y H H +HRD+K N+L+D++ K+ADF
Sbjct: 104 FDYICKNG---RLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADF 160
Query: 159 GVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
G+S M D + S G+P + APEV+ + DIWS G+ L G PF
Sbjct: 161 GLSNMMSDGEFLRXS----CGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPF 216
Query: 219 --SKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHF 276
P + + G+ Y + + S L+ L DP KR T + + +H +
Sbjct: 217 DDDHVPTL------FKKICDGIFYT-PQYLNPSVISLLKHMLQVDPMKRATIKDIREHEW 269
Query: 277 FK 278
FK
Sbjct: 270 FK 271
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 139/293 (47%), Gaps = 35/293 (11%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR----REVQTMRVT 69
++++ E++GEG VY+A E+VA+K + L + + +G+ RE+ ++
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL---DTETEGVPSTAIREISLLKEL 59
Query: 70 NHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVY 129
NHPN+++ T + L++V ++ M ++ G P+I + L + L+ L +
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLSF 118
Query: 130 LHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVM 189
H H +HRD+K N+LI++ GAIKLADFG++ G R+ V T + APE++
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRAPEIL 175
Query: 190 QQLHGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTL----QNAPPGLDYER 242
Y DIWS G E+ A F S+ + + TL + PG+
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 235
Query: 243 DKR----------FSKSF-------KELVTACLVKDPKKRPTAEKLMKHHFFK 278
D + FSK + L++ L DP KR +A+ + H FF+
Sbjct: 236 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 141/293 (48%), Gaps = 35/293 (11%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR----REVQTMRVT 69
++++ E++GEG VY+A E+VA+K + L + + +G+ RE+ ++
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL---DTETEGVPSTAIREISLLKEL 59
Query: 70 NHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVY 129
NHPN+++ T + L++V ++ M ++ G P+I + L + L+ L +
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 130 LHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVM 189
H H +HRD+K N+LI++ GAIKLADFG++ G R+ V T + APE++
Sbjct: 119 CHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEIL 175
Query: 190 QQLHGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTL----QNAPPGL---- 238
Y DIWS G E+ A F S+ + + TL + PG+
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 235
Query: 239 DYERD------KRFSKSF-------KELVTACLVKDPKKRPTAEKLMKHHFFK 278
DY+ + FSK + L++ L DP KR +A+ + H FF+
Sbjct: 236 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 127/273 (46%), Gaps = 35/273 (12%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVL---DLEKCNNDLDGIRREVQTMRVTN 70
+D+ + +G+G VY A I+A+KVL LEK + +RREV+
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLR 66
Query: 71 HPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYL 130
HPN+LR + F +++++ Y G+ ++ F+E AT + E AL Y
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYC 124
Query: 131 HFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
H IHRD+K N+L+ S G +K+ADFG S + R GT ++ PE+++
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRTXLCGTLDYLPPEMIE 179
Query: 191 -QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKS 249
++H D K D+WS G+ E G PF T Q Y+R R +
Sbjct: 180 GRMH--DEKVDLWSLGVLCYEFLVGKPPFEA--------NTYQET-----YKRISRVEFT 224
Query: 250 F--------KELVTACLVKDPKKRPTAEKLMKH 274
F ++L++ L +P +RP ++++H
Sbjct: 225 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 257
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 127/273 (46%), Gaps = 35/273 (12%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVL---DLEKCNNDLDGIRREVQTMRVTN 70
+D+ + +G+G VY A I+A+KVL LEK + +RREV+
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLR 69
Query: 71 HPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYL 130
HPN+LR + F +++++ Y G+ ++ F+E AT + E AL Y
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYC 127
Query: 131 HFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
H IHRD+K N+L+ S G +K+ADFG S + R GT ++ PE+++
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRAALCGTLDYLPPEMIE 182
Query: 191 -QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKS 249
++H D K D+WS G+ E G PF T Q Y+R R +
Sbjct: 183 GRMH--DEKVDLWSLGVLCYEFLVGKPPFEA--------NTYQET-----YKRISRVEFT 227
Query: 250 F--------KELVTACLVKDPKKRPTAEKLMKH 274
F ++L++ L +P +RP ++++H
Sbjct: 228 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 260
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 127/273 (46%), Gaps = 35/273 (12%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVL---DLEKCNNDLDGIRREVQTMRVTN 70
+D+ + +G+G VY A I+A+KVL LEK + +RREV+
Sbjct: 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLR 67
Query: 71 HPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYL 130
HPN+LR + F +++++ Y G+ ++ F+E AT + E AL Y
Sbjct: 68 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYC 125
Query: 131 HFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
H IHRD+K N+L+ S G +K+ADFG S + R GT ++ PE+++
Sbjct: 126 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRTDLCGTLDYLPPEMIE 180
Query: 191 -QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKS 249
++H D K D+WS G+ E G PF T Q Y+R R +
Sbjct: 181 GRMH--DEKVDLWSLGVLCYEFLVGKPPFEA--------NTYQET-----YKRISRVEFT 225
Query: 250 F--------KELVTACLVKDPKKRPTAEKLMKH 274
F ++L++ L +P +RP ++++H
Sbjct: 226 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 258
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 127/273 (46%), Gaps = 35/273 (12%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVL---DLEKCNNDLDGIRREVQTMRVTN 70
+D+ + +G+G VY A I+A+KVL LEK + +RREV+
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLR 71
Query: 71 HPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYL 130
HPN+LR + F +++++ Y G+ ++ F+E AT + E AL Y
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYC 129
Query: 131 HFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
H IHRD+K N+L+ S G +K+ADFG S + R GT ++ PE+++
Sbjct: 130 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRTDLCGTLDYLPPEMIE 184
Query: 191 -QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKS 249
++H D K D+WS G+ E G PF T Q Y+R R +
Sbjct: 185 GRMH--DEKVDLWSLGVLCYEFLVGKPPFEA--------NTYQET-----YKRISRVEFT 229
Query: 250 F--------KELVTACLVKDPKKRPTAEKLMKH 274
F ++L++ L +P +RP ++++H
Sbjct: 230 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 262
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 127/273 (46%), Gaps = 35/273 (12%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVL---DLEKCNNDLDGIRREVQTMRVTN 70
+D+ + +G+G VY A I+A+KVL LEK + +RREV+
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLR 66
Query: 71 HPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYL 130
HPN+LR + F +++++ Y G+ ++ F+E AT + E AL Y
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYC 124
Query: 131 HFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
H IHRD+K N+L+ S G +K+ADFG S + R GT ++ PE+++
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRTDLCGTLDYLPPEMIE 179
Query: 191 -QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKS 249
++H D K D+WS G+ E G PF T Q Y+R R +
Sbjct: 180 GRMH--DEKVDLWSLGVLCYEFLVGKPPFEA--------NTYQET-----YKRISRVEFT 224
Query: 250 F--------KELVTACLVKDPKKRPTAEKLMKH 274
F ++L++ L +P +RP ++++H
Sbjct: 225 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 257
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 128/273 (46%), Gaps = 35/273 (12%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVL---DLEKCNNDLDGIRREVQTMRVTN 70
+D+ + +G+G VY A I+A+KVL LEK + +RREV+
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLR 66
Query: 71 HPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYL 130
HPN+LR + F +++++ Y G+ ++ F+E AT + E AL Y
Sbjct: 67 HPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYC 124
Query: 131 HFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
H IHRD+K N+L+ S G +K+ADFG S + R GT ++ PE+++
Sbjct: 125 HSKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRAALCGTLDYLPPEMIE 179
Query: 191 -QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKS 249
++H D K D+WS G+ E G PF T Q+ Y+R R +
Sbjct: 180 GRMH--DEKVDLWSLGVLCYEFLVGKPPFEA--------NTYQDT-----YKRISRVEFT 224
Query: 250 F--------KELVTACLVKDPKKRPTAEKLMKH 274
F ++L++ L +P +RP ++++H
Sbjct: 225 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 257
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 120/242 (49%), Gaps = 16/242 (6%)
Query: 43 AIKVLDLE--KCNNDLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL 100
A+KV+ K D + + REVQ ++ +HPN+ + + F ++V GG
Sbjct: 55 AVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELF 114
Query: 101 HIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDS---NGAIKLAD 157
+ S + F E A ++R+ L + Y H + +HRD+K N+L++S + I++ D
Sbjct: 115 DEIISR--KRFSEVDAARIIRQVLSGITYXHKNKIVHRDLKPENLLLESKSKDANIRIID 172
Query: 158 FGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLHG-YDFKADIWSFGITALELAHGHA 216
FG+S F+A + + + +GT ++APEV LHG YD K D+WS G+ L G
Sbjct: 173 FGLST-HFEASKKXKDK---IGTAYYIAPEV---LHGTYDEKCDVWSTGVILYILLSGCP 225
Query: 217 PFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHF 276
PF+ + L ++ + + K+ S+S K+L+ L P R +A + H +
Sbjct: 226 PFNGANEYDI-LKKVEKGKYTFELPQWKKVSESAKDLIRKXLTYVPSXRISARDALDHEW 284
Query: 277 FK 278
+
Sbjct: 285 IQ 286
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 128/273 (46%), Gaps = 17/273 (6%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKC--NNDLDGIRREVQTMRVTNH 71
+D++ + +GEG +TV A + + AIK+L+ N + + RE M +H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 72 PNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLH 131
P ++ + +F L+ + Y G L ++ F+E E + AL YLH
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLH 150
Query: 132 FHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQ 191
G IHRD+K NIL++ + I++ DFG +A + +Q N+FVGT +++PE++ +
Sbjct: 151 GKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLSPESKQARANSFVGTAQYVSPELLTE 209
Query: 192 LHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFK 251
+D+W+ G +L G PF + ++ L+Y+ ++F +
Sbjct: 210 KSACK-SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-----LEYDFPEKFFPKAR 263
Query: 252 ELVTACLVKDPKKRPTAEK------LMKHHFFK 278
+LV LV D KR E+ L H FF+
Sbjct: 264 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 296
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 122/242 (50%), Gaps = 16/242 (6%)
Query: 43 AIKVLDLE--KCNNDLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL 100
A+KV+ K D + + REVQ ++ +HPN+++ + F ++V GG
Sbjct: 61 AVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELF 120
Query: 101 HIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDS---NGAIKLAD 157
+ S + F E A ++R+ L + Y+H + +HRD+K N+L++S + I++ D
Sbjct: 121 DEIISR--KRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIID 178
Query: 158 FGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLHG-YDFKADIWSFGITALELAHGHA 216
FG+S F+A + + + +GT ++APEV LHG YD K D+WS G+ L G
Sbjct: 179 FGLST-HFEASKKMKDK---IGTAYYIAPEV---LHGTYDEKCDVWSTGVILYILLSGCP 231
Query: 217 PFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHF 276
PF+ + L ++ + + K+ S+S K+L+ L P R +A + H +
Sbjct: 232 PFNGANEYDI-LKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEW 290
Query: 277 FK 278
+
Sbjct: 291 IQ 292
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 127/273 (46%), Gaps = 35/273 (12%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVL---DLEKCNNDLDGIRREVQTMRVTN 70
+D+ + +G+G VY A I+A+KVL LEK + +RREV+
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLR 66
Query: 71 HPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYL 130
HPN+LR + F +++++ Y G+ ++ F+E AT + E AL Y
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYC 124
Query: 131 HFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
H IHRD+K N+L+ S G +K+ADFG S + R GT ++ PE+++
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRXXLCGTLDYLPPEMIE 179
Query: 191 -QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKS 249
++H D K D+WS G+ E G PF T Q Y+R R +
Sbjct: 180 GRMH--DEKVDLWSLGVLCYEFLVGKPPFEA--------NTYQET-----YKRISRVEFT 224
Query: 250 F--------KELVTACLVKDPKKRPTAEKLMKH 274
F ++L++ L +P +RP ++++H
Sbjct: 225 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 257
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 128/273 (46%), Gaps = 17/273 (6%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKC--NNDLDGIRREVQTMRVTNH 71
+D++ + +GEG +TV A + + AIK+L+ N + + RE M +H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 72 PNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLH 131
P ++ + +F L+ + Y G L ++ F+E E + AL YLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKI--GSFDETCTRFYTAEIVSALEYLH 149
Query: 132 FHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQ 191
G IHRD+K NIL++ + I++ DFG +A + +Q N+FVGT +++PE++ +
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLSPESKQARANSFVGTAQYVSPELLTE 208
Query: 192 LHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFK 251
+D+W+ G +L G PF + ++ L+Y+ ++F +
Sbjct: 209 KSASK-SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-----LEYDFPEKFFPKAR 262
Query: 252 ELVTACLVKDPKKRPTAEK------LMKHHFFK 278
+LV LV D KR E+ L H FF+
Sbjct: 263 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 295
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 127/273 (46%), Gaps = 35/273 (12%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVL---DLEKCNNDLDGIRREVQTMRVTN 70
+D+ + +G+G VY A I+A+KVL LEK + +RREV+
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLR 69
Query: 71 HPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYL 130
HPN+LR + F +++++ Y G+ ++ F+E AT + E AL Y
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYC 127
Query: 131 HFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
H IHRD+K N+L+ S G +K+ADFG S + R GT ++ PE+++
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRXXLCGTLDYLPPEMIE 182
Query: 191 -QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKS 249
++H D K D+WS G+ E G PF T Q Y+R R +
Sbjct: 183 GRMH--DEKVDLWSLGVLCYEFLVGKPPFEA--------NTYQET-----YKRISRVEFT 227
Query: 250 F--------KELVTACLVKDPKKRPTAEKLMKH 274
F ++L++ L +P +RP ++++H
Sbjct: 228 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 260
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 127/273 (46%), Gaps = 35/273 (12%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVL---DLEKCNNDLDGIRREVQTMRVTN 70
+D+ + +G+G VY A I+A+KVL LEK + +RREV+
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLR 66
Query: 71 HPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYL 130
HPN+LR + F +++++ Y G+ ++ F+E AT + E AL Y
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYC 124
Query: 131 HFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
H IHRD+K N+L+ S G +K+ADFG S + R GT ++ PE+++
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRTDLCGTLDYLPPEMIE 179
Query: 191 -QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKS 249
++H D K D+WS G+ E G PF T Q Y+R R +
Sbjct: 180 GRMH--DEKVDLWSLGVLCYEFLVGKPPFEA--------NTYQET-----YKRISRVEFT 224
Query: 250 F--------KELVTACLVKDPKKRPTAEKLMKH 274
F ++L++ L +P +RP ++++H
Sbjct: 225 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 257
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 127/273 (46%), Gaps = 35/273 (12%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVL---DLEKCNNDLDGIRREVQTMRVTN 70
+D+ + +G+G VY A I+A+KVL LEK + +RREV+
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSHLR 66
Query: 71 HPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYL 130
HPN+LR + F +++++ Y G+ ++ F+E AT + E AL Y
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYC 124
Query: 131 HFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
H IHRD+K N+L+ S G +K+ADFG S + R GT ++ PE+++
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RRAALCGTLDYLPPEMIE 179
Query: 191 -QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKS 249
++H D K D+WS G+ E G PF T Q Y+R R +
Sbjct: 180 GRMH--DEKVDLWSLGVLCYEFLVGKPPFEA--------NTYQET-----YKRISRVEFT 224
Query: 250 F--------KELVTACLVKDPKKRPTAEKLMKH 274
F ++L++ L +P +RP ++++H
Sbjct: 225 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 257
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 125/261 (47%), Gaps = 20/261 (7%)
Query: 16 YRLYEEVGEGVSATVYRALCIPLNEIVAIKVL--DLEKCNNDLDGIRREVQTMRVTNHPN 73
Y L E +G G + V+ A + + VA+KVL DL + + RRE Q NHP
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPA 73
Query: 74 VLRAH----CSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIAT-LLRETLKALV 128
++ + G ++VM Y+ G + I+ + EG P A ++ + +AL
Sbjct: 74 IVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT---EGPMTPKRAIEVIADACQALN 130
Query: 129 YLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEV 188
+ H +G IHRDVK NI+I + A+K+ DFG++ + D+G+ +GT +++PE
Sbjct: 131 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE- 189
Query: 189 MQQLHG--YDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQN--APPGLDYERDK 244
Q G D ++D++S G E+ G PF+ P+ V ++ PP R +
Sbjct: 190 --QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPS---ARHE 244
Query: 245 RFSKSFKELVTACLVKDPKKR 265
S +V L K+P+ R
Sbjct: 245 GLSADLDAVVLKALAKNPENR 265
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 139/293 (47%), Gaps = 35/293 (11%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR----REVQTMRVT 69
++++ E++GEG VY+A E+VA+K + L + + +G+ RE+ ++
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL---DTETEGVPSTAIREISLLKEL 58
Query: 70 NHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVY 129
NHPN+++ T + L++V ++ M ++ G P+I + L + L+ L +
Sbjct: 59 NHPNIVKLLDVIHTENKLYLVFEHVHQ-DLKTFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 130 LHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVM 189
H H +HRD+K N+LI++ GAIKLADFG++ G R+ V T + APE++
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRAPEIL 174
Query: 190 QQLHGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTL----QNAPPGLDYER 242
Y DIWS G E+ A F S+ + + TL + PG+
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 234
Query: 243 DKR----------FSKSF-------KELVTACLVKDPKKRPTAEKLMKHHFFK 278
D + FSK + L++ L DP KR +A+ + H FF+
Sbjct: 235 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 131/263 (49%), Gaps = 12/263 (4%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCN-NDLDGIRREVQTMRVTNHPN 73
+Y + EE+G+G + V R + A K+++ +K + D + RE + R HPN
Sbjct: 7 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPN 66
Query: 74 VLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFH 133
++R H S ++V + GG + + E + E + +++ L+++ Y H +
Sbjct: 67 IVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR--EFYSEADASHCIQQILESIAYCHSN 124
Query: 134 GHIHRDVKAGNILIDSN---GAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
G +HR++K N+L+ S A+KLADFG++ + D+ + + F GTP +++PEV++
Sbjct: 125 GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS----EAWHGFAGTPGYLSPEVLK 180
Query: 191 QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSF 250
+ Y DIW+ G+ L G+ PF ++ A E D +
Sbjct: 181 K-DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDT-VTPEA 238
Query: 251 KELVTACLVKDPKKRPTAEKLMK 273
K L+ + L +PKKR TA++ +K
Sbjct: 239 KSLIDSMLTVNPKKRITADQALK 261
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 127/273 (46%), Gaps = 17/273 (6%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKC--NNDLDGIRREVQTMRVTNH 71
+D++ + +GEG +TV A + + AIK+L+ N + + RE M +H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 72 PNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLH 131
P ++ + +F L+ + Y G L ++ F+E E + AL YLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLH 149
Query: 132 FHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQ 191
G IHRD+K NIL++ + I++ DFG +A + +Q N FVGT +++PE++ +
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 192 LHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFK 251
+D+W+ G +L G PF + ++ L+Y+ ++F +
Sbjct: 209 KSAXK-SSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIK-----LEYDFPEKFFPKAR 262
Query: 252 ELVTACLVKDPKKRPTAEK------LMKHHFFK 278
+LV LV D KR E+ L H FF+
Sbjct: 263 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 295
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 127/273 (46%), Gaps = 17/273 (6%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKC--NNDLDGIRREVQTMRVTNH 71
+D++ + +GEG +TV A + + AIK+L+ N + + RE M +H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 72 PNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLH 131
P ++ + +F L+ + Y G L ++ F+E E + AL YLH
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLH 150
Query: 132 FHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQ 191
G IHRD+K NIL++ + I++ DFG +A + +Q N FVGT +++PE++ +
Sbjct: 151 GKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLSPESKQARANXFVGTAQYVSPELLTE 209
Query: 192 LHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFK 251
+D+W+ G +L G PF + ++ L+Y+ ++F +
Sbjct: 210 KSACK-SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-----LEYDFPEKFFPKAR 263
Query: 252 ELVTACLVKDPKKRPTAEK------LMKHHFFK 278
+LV LV D KR E+ L H FF+
Sbjct: 264 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 296
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 131/263 (49%), Gaps = 12/263 (4%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCN-NDLDGIRREVQTMRVTNHPN 73
+Y + EE+G+G + V R + A K+++ +K + D + RE + R HPN
Sbjct: 6 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPN 65
Query: 74 VLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFH 133
++R H S ++V + GG + + E + E + +++ L+++ Y H +
Sbjct: 66 IVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR--EFYSEADASHCIQQILESIAYCHSN 123
Query: 134 GHIHRDVKAGNILIDSN---GAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
G +HR++K N+L+ S A+KLADFG++ + D+ + + F GTP +++PEV++
Sbjct: 124 GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS----EAWHGFAGTPGYLSPEVLK 179
Query: 191 QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSF 250
+ Y DIW+ G+ L G+ PF ++ A E D +
Sbjct: 180 K-DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDT-VTPEA 237
Query: 251 KELVTACLVKDPKKRPTAEKLMK 273
K L+ + L +PKKR TA++ +K
Sbjct: 238 KSLIDSMLTVNPKKRITADQALK 260
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 131/263 (49%), Gaps = 12/263 (4%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCN-NDLDGIRREVQTMRVTNHPN 73
+Y + EE+G+G + V R + A K+++ +K + D + RE + R HPN
Sbjct: 7 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPN 66
Query: 74 VLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFH 133
++R H S ++V + GG + + E + E + +++ L+++ Y H +
Sbjct: 67 IVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR--EFYSEADASHCIQQILESIAYCHSN 124
Query: 134 GHIHRDVKAGNILIDSN---GAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
G +HR++K N+L+ S A+KLADFG++ + D+ + + F GTP +++PEV++
Sbjct: 125 GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS----EAWHGFAGTPGYLSPEVLK 180
Query: 191 QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSF 250
+ Y DIW+ G+ L G+ PF ++ A E D +
Sbjct: 181 K-DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDT-VTPEA 238
Query: 251 KELVTACLVKDPKKRPTAEKLMK 273
K L+ + L +PKKR TA++ +K
Sbjct: 239 KSLIDSMLTVNPKKRITADQALK 261
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 127/273 (46%), Gaps = 17/273 (6%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKC--NNDLDGIRREVQTMRVTNH 71
+D++ + +GEG +TV A + + AIK+L+ N + + RE M +H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 72 PNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLH 131
P ++ + +F L+ + Y G L ++ F+E E + AL YLH
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLH 147
Query: 132 FHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQ 191
G IHRD+K NIL++ + I++ DFG +A + +Q N FVGT +++PE++ +
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLSPESKQARANAFVGTAQYVSPELLTE 206
Query: 192 LHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFK 251
+D+W+ G +L G PF + ++ L+Y+ ++F +
Sbjct: 207 KSACK-SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-----LEYDFPEKFFPKAR 260
Query: 252 ELVTACLVKDPKKRPTAEK------LMKHHFFK 278
+LV LV D KR E+ L H FF+
Sbjct: 261 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 293
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 127/273 (46%), Gaps = 17/273 (6%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKC--NNDLDGIRREVQTMRVTNH 71
+D++ + +GEG +TV A + + AIK+L+ N + + RE M +H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 72 PNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLH 131
P ++ + +F L+ + Y G L ++ F+E E + AL YLH
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLH 147
Query: 132 FHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQ 191
G IHRD+K NIL++ + I++ DFG +A + +Q N FVGT +++PE++ +
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLSPESKQARANXFVGTAQYVSPELLTE 206
Query: 192 LHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFK 251
+D+W+ G +L G PF + ++ L+Y+ ++F +
Sbjct: 207 KSACK-SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-----LEYDFPEKFFPKAR 260
Query: 252 ELVTACLVKDPKKRPTAEK------LMKHHFFK 278
+LV LV D KR E+ L H FF+
Sbjct: 261 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 293
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 127/273 (46%), Gaps = 17/273 (6%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKC--NNDLDGIRREVQTMRVTNH 71
+D++ + +GEG +TV A + + AIK+L+ N + + RE M +H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 72 PNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLH 131
P ++ + +F L+ + Y G L ++ F+E E + AL YLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLH 149
Query: 132 FHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQ 191
G IHRD+K NIL++ + I++ DFG +A + +Q N FVGT +++PE++ +
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 192 LHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFK 251
+D+W+ G +L G PF + ++ L+Y+ ++F +
Sbjct: 209 KSACK-SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-----LEYDFPEKFFPKAR 262
Query: 252 ELVTACLVKDPKKRPTAEK------LMKHHFFK 278
+LV LV D KR E+ L H FF+
Sbjct: 263 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 295
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 127/273 (46%), Gaps = 17/273 (6%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKC--NNDLDGIRREVQTMRVTNH 71
+D++ + +GEG +TV A + + AIK+L+ N + + RE M +H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 72 PNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLH 131
P ++ + +F L+ + Y G L ++ F+E E + AL YLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLH 149
Query: 132 FHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQ 191
G IHRD+K NIL++ + I++ DFG +A + +Q N FVGT +++PE++ +
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 192 LHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFK 251
+D+W+ G +L G PF + ++ L+Y+ ++F +
Sbjct: 209 KSACK-SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-----LEYDFPEKFFPKAR 262
Query: 252 ELVTACLVKDPKKRPTAEK------LMKHHFFK 278
+LV LV D KR E+ L H FF+
Sbjct: 263 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 295
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 127/273 (46%), Gaps = 17/273 (6%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKC--NNDLDGIRREVQTMRVTNH 71
+D++ + +GEG +TV A + + AIK+L+ N + + RE M +H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 72 PNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLH 131
P ++ + +F L+ + Y G L ++ F+E E + AL YLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLH 149
Query: 132 FHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQ 191
G IHRD+K NIL++ + I++ DFG +A + +Q N FVGT +++PE++ +
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 192 LHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFK 251
+D+W+ G +L G PF + ++ L+Y+ ++F +
Sbjct: 209 KSACK-SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-----LEYDFPEKFFPKAR 262
Query: 252 ELVTACLVKDPKKRPTAEK------LMKHHFFK 278
+LV LV D KR E+ L H FF+
Sbjct: 263 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 295
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 127/273 (46%), Gaps = 17/273 (6%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKC--NNDLDGIRREVQTMRVTNH 71
+D++ + +GEG +TV A + + AIK+L+ N + + RE M +H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 72 PNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLH 131
P ++ + +F L+ + Y G L ++ F+E E + AL YLH
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLH 147
Query: 132 FHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQ 191
G IHRD+K NIL++ + I++ DFG +A + +Q N FVGT +++PE++ +
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLSPESKQARANXFVGTAQYVSPELLTE 206
Query: 192 LHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFK 251
+D+W+ G +L G PF + ++ L+Y+ ++F +
Sbjct: 207 KSACK-SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-----LEYDFPEKFFPKAR 260
Query: 252 ELVTACLVKDPKKRPTAEK------LMKHHFFK 278
+LV LV D KR E+ L H FF+
Sbjct: 261 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 293
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 138/293 (47%), Gaps = 35/293 (11%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR----REVQTMRVT 69
++++ E++GEG VY+A E+VA+ + L + + +G+ RE+ ++
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRL---DTETEGVPSTAIREISLLKEL 59
Query: 70 NHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVY 129
NHPN+++ T + L++V ++ M ++ G P+I + L + L+ L +
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 130 LHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVM 189
H H +HRD+K N+LI++ GAIKLADFG++ G R+ V T + APE++
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRAPEIL 175
Query: 190 QQLHGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTL----QNAPPGLDYER 242
Y DIWS G E+ A F S+ + + TL + PG+
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 235
Query: 243 DKR----------FSKSF-------KELVTACLVKDPKKRPTAEKLMKHHFFK 278
D + FSK + L++ L DP KR +A+ + H FF+
Sbjct: 236 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 138/293 (47%), Gaps = 35/293 (11%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR----REVQTMRVT 69
++++ E++GEG VY+A E+VA+ + L + + +G+ RE+ ++
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRL---DTETEGVPSTAIREISLLKEL 58
Query: 70 NHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVY 129
NHPN+++ T + L++V ++ M ++ G P+I + L + L+ L +
Sbjct: 59 NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 130 LHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVM 189
H H +HRD+K N+LI++ GAIKLADFG++ G R+ V T + APE++
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRAPEIL 174
Query: 190 QQLHGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTL----QNAPPGLDYER 242
Y DIWS G E+ A F S+ + + TL + PG+
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 234
Query: 243 DKR----------FSKSF-------KELVTACLVKDPKKRPTAEKLMKHHFFK 278
D + FSK + L++ L DP KR +A+ + H FF+
Sbjct: 235 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 128/273 (46%), Gaps = 17/273 (6%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKC--NNDLDGIRREVQTMRVTNH 71
+D++ + +GEG +TV A + + AIK+L+ N + + RE M +H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 72 PNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLH 131
P ++ + +F L+ + Y G L ++ F+E E + AL YLH
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLH 146
Query: 132 FHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQ 191
G IHRD+K NIL++ + I++ DFG +A + +Q N+FVGT +++PE++ +
Sbjct: 147 GKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLSPESKQARANSFVGTAQYVSPELLTE 205
Query: 192 LHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFK 251
+D+W+ G +L G PF + ++ L+Y+ ++F +
Sbjct: 206 KSACK-SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-----LEYDFPEKFFPKAR 259
Query: 252 ELVTACLVKDPKKRPTAEK------LMKHHFFK 278
+LV LV D KR E+ L H FF+
Sbjct: 260 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 292
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 127/273 (46%), Gaps = 17/273 (6%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKC--NNDLDGIRREVQTMRVTNH 71
+D++ + +GEG +TV A + + AIK+L+ N + + RE M +H
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 69
Query: 72 PNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLH 131
P ++ + +F L+ + Y G L ++ F+E E + AL YLH
Sbjct: 70 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLH 127
Query: 132 FHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQ 191
G IHRD+K NIL++ + I++ DFG +A + +Q N FVGT +++PE++ +
Sbjct: 128 GKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLSPESKQARANXFVGTAQYVSPELLTE 186
Query: 192 LHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFK 251
+D+W+ G +L G PF + ++ L+Y+ ++F +
Sbjct: 187 KSACK-SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-----LEYDFPEKFFPKAR 240
Query: 252 ELVTACLVKDPKKRPTAEK------LMKHHFFK 278
+LV LV D KR E+ L H FF+
Sbjct: 241 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 273
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 127/273 (46%), Gaps = 17/273 (6%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKC--NNDLDGIRREVQTMRVTNH 71
+D++ + +GEG +TV A + + AIK+L+ N + + RE M +H
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 68
Query: 72 PNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLH 131
P ++ + +F L+ + Y G L ++ F+E E + AL YLH
Sbjct: 69 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLH 126
Query: 132 FHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQ 191
G IHRD+K NIL++ + I++ DFG +A + +Q N FVGT +++PE++ +
Sbjct: 127 GKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLSPESKQARANXFVGTAQYVSPELLTE 185
Query: 192 LHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFK 251
+D+W+ G +L G PF + ++ L+Y+ ++F +
Sbjct: 186 KSACK-SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-----LEYDFPEKFFPKAR 239
Query: 252 ELVTACLVKDPKKRPTAEK------LMKHHFFK 278
+LV LV D KR E+ L H FF+
Sbjct: 240 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 272
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 131/279 (46%), Gaps = 25/279 (8%)
Query: 16 YRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDG-----IRREVQTMRVTN 70
Y + EE+G G A V + + A K + + ++ G I REV +R
Sbjct: 7 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR 66
Query: 71 HPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYL 130
HPN++ H F + +++ ++GG + A E E L++ L + YL
Sbjct: 67 HPNIITLHDIFENKTDVVLILELVSGGELFDFL--AEKESLTEDEATQFLKQILDGVHYL 124
Query: 131 HFHGHIHRDVKAGNI-LIDSNG---AIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAP 186
H H D+K NI L+D N IKL DFG+ A +AG+ +N F GTP ++AP
Sbjct: 125 HSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGI-AHKIEAGNE--FKNIF-GTPEFVAP 180
Query: 187 EVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRF 246
E++ +AD+WS G+ L G +PF + TL N ++Y+ D+ +
Sbjct: 181 EIVN-YEPLGLEADMWSIGVITYILLSGASPFLGETKQE----TLTNIS-AVNYDFDEEY 234
Query: 247 ----SKSFKELVTACLVKDPKKRPTAEKLMKHHFFKHAR 281
S+ K+ + LVKDPK+R T + ++H + K R
Sbjct: 235 FSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIR 273
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 130/292 (44%), Gaps = 20/292 (6%)
Query: 16 YRLYEEVGEGVSATVYRALCIP---LNEIVAIKVLD---LEKCNNDLDGIRREVQTMRVT 69
+ L +G+G V++ + +I A+KVL + + D + E +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 70 NHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEG-FEEPVIATLLRETLKALV 128
HP ++ +F TG L++++ Y++GG ++ EG F E L E AL
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLER---EGIFMEDTACFYLAEISMALG 135
Query: 129 YLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEV 188
+LH G I+RD+K NI+++ G +KL DFG+ G +TF GT +MAPE+
Sbjct: 136 HLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT---VTHTFCGTIEYMAPEI 192
Query: 189 MQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ---NAPPGLDYERDKR 245
+ + G++ D WS G ++ G PF+ K + L+ N PP L E
Sbjct: 193 LMR-SGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARDL 251
Query: 246 FSKSFKELVTACLVKDPKKRPTAEKLMKHHFFKHARSNDFLARSIVDNLAPL 297
K K + L P A ++ H FF+H + LAR + PL
Sbjct: 252 LKKLLKRNAASRLGAGPGD---AGEVQAHPFFRHINWEELLARKVEPPFKPL 300
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 127/273 (46%), Gaps = 17/273 (6%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKC--NNDLDGIRREVQTMRVTNH 71
+D++ + +GEG +TV A + + AIK+L+ N + + RE M +H
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 67
Query: 72 PNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLH 131
P ++ + +F L+ + Y G L ++ F+E E + AL YLH
Sbjct: 68 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLH 125
Query: 132 FHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQ 191
G IHRD+K NIL++ + I++ DFG +A + +Q N FVGT +++PE++ +
Sbjct: 126 GKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLSPESKQARANXFVGTAQYVSPELLTE 184
Query: 192 LHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFK 251
+D+W+ G +L G PF + ++ L+Y+ ++F +
Sbjct: 185 KSACK-SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-----LEYDFPEKFFPKAR 238
Query: 252 ELVTACLVKDPKKRPTAEK------LMKHHFFK 278
+LV LV D KR E+ L H FF+
Sbjct: 239 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 271
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 127/273 (46%), Gaps = 17/273 (6%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKC--NNDLDGIRREVQTMRVTNH 71
+D++ + +GEG +TV A + + AIK+L+ N + + RE M +H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 72 PNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLH 131
P ++ + +F L+ + Y G L ++ F+E E + AL YLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLH 149
Query: 132 FHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQ 191
G IHRD+K NIL++ + I++ DFG +A + +Q N FVGT +++PE++ +
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 192 LHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFK 251
+D+W+ G +L G PF + ++ L+Y+ ++F +
Sbjct: 209 KSACK-SSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIK-----LEYDFPEKFFPKAR 262
Query: 252 ELVTACLVKDPKKRPTAEK------LMKHHFFK 278
+LV LV D KR E+ L H FF+
Sbjct: 263 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 295
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 127/273 (46%), Gaps = 17/273 (6%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKC--NNDLDGIRREVQTMRVTNH 71
+D++ + +GEG +TV A + + AIK+L+ N + + RE M +H
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 66
Query: 72 PNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLH 131
P ++ + +F L+ + Y G L ++ F+E E + AL YLH
Sbjct: 67 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLH 124
Query: 132 FHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQ 191
G IHRD+K NIL++ + I++ DFG +A + +Q N FVGT +++PE++ +
Sbjct: 125 GKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLSPESKQARANXFVGTAQYVSPELLTE 183
Query: 192 LHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFK 251
+D+W+ G +L G PF + ++ L+Y+ ++F +
Sbjct: 184 KSACK-SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-----LEYDFPEKFFPKAR 237
Query: 252 ELVTACLVKDPKKRPTAEK------LMKHHFFK 278
+LV LV D KR E+ L H FF+
Sbjct: 238 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 270
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 127/269 (47%), Gaps = 27/269 (10%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVL-----DLEKCNNDLDGIRREVQTMRVT 69
D + E++G G TV+RA VA+K+L E+ N L REV M+
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFL----REVAIMKRL 91
Query: 70 NHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIM-KSAYPEGFEEPVIATLLRETLKALV 128
HPN++ + T L +V Y++ GS ++ KS E +E ++ + K +
Sbjct: 92 RHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMN 151
Query: 129 YLHFHGH--IHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAP 186
YLH +HRD+K+ N+L+D +K+ DFG+S A S+ GTP WMAP
Sbjct: 152 YLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSR--LKASXFLXSKXA-AGTPEWMAP 208
Query: 187 EVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYER---D 243
EV++ + K+D++SFG+ ELA P+ P +V+ A G +R
Sbjct: 209 EVLRD-EPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVV------AAVGFKCKRLEIP 261
Query: 244 KRFSKSFKELVTACLVKDPKKRPTAEKLM 272
+ + ++ C +P KRP+ +M
Sbjct: 262 RNLNPQVAAIIEGCWTNEPWKRPSFATIM 290
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 127/273 (46%), Gaps = 17/273 (6%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKC--NNDLDGIRREVQTMRVTNH 71
+D++ + +GEG +TV A + + AIK+L+ N + + RE M +H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 72 PNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLH 131
P ++ + +F L+ + Y G L ++ F+E E + AL YLH
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLH 146
Query: 132 FHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQ 191
G IHRD+K NIL++ + I++ DFG +A + +Q N FVGT +++PE++ +
Sbjct: 147 GKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLSPESKQARANXFVGTAQYVSPELLTE 205
Query: 192 LHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFK 251
+D+W+ G +L G PF + ++ L+Y+ ++F +
Sbjct: 206 KSACK-SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-----LEYDFPEKFFPKAR 259
Query: 252 ELVTACLVKDPKKRPTAEK------LMKHHFFK 278
+LV LV D KR E+ L H FF+
Sbjct: 260 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 292
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 126/273 (46%), Gaps = 17/273 (6%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKC--NNDLDGIRREVQTMRVTNH 71
+D++ + +GEG +TV A + + AIK+L+ N + + RE M +H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 72 PNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLH 131
P ++ + F L+ + Y G L ++ F+E E + AL YLH
Sbjct: 97 PFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLH 154
Query: 132 FHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQ 191
G IHRD+K NIL++ + I++ DFG +A + +Q N FVGT +++PE++ +
Sbjct: 155 GKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLSPESKQARANXFVGTAQYVSPELLTE 213
Query: 192 LHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFK 251
+D+W+ G +L G PF + ++ L+Y+ ++F +
Sbjct: 214 KSACK-SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-----LEYDFPEKFFPKAR 267
Query: 252 ELVTACLVKDPKKRPTAEK------LMKHHFFK 278
+LV LV D KR E+ L H FF+
Sbjct: 268 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 300
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 127/273 (46%), Gaps = 17/273 (6%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKC--NNDLDGIRREVQTMRVTNH 71
+D++ + +GEG +TV A + + AIK+L+ N + + RE M +H
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 72 PNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLH 131
P ++ + +F L+ + Y G L ++ F+E E + AL YLH
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLH 131
Query: 132 FHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQ 191
G IHRD+K NIL++ + I++ DFG +A + +Q N FVGT +++PE++ +
Sbjct: 132 GKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLSPESKQARANXFVGTAQYVSPELLTE 190
Query: 192 LHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFK 251
+D+W+ G +L G PF + ++ L+Y+ ++F +
Sbjct: 191 KSACK-SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-----LEYDFPEKFFPKAR 244
Query: 252 ELVTACLVKDPKKRPTAEK------LMKHHFFK 278
+LV LV D KR E+ L H FF+
Sbjct: 245 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 277
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 124/261 (47%), Gaps = 20/261 (7%)
Query: 16 YRLYEEVGEGVSATVYRALCIPLNEIVAIKVL--DLEKCNNDLDGIRREVQTMRVTNHPN 73
Y L E +G G + V+ A + + VA+KVL DL + + RRE Q NHP
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPA 73
Query: 74 VLRAH----CSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIAT-LLRETLKALV 128
++ + G ++VM Y+ G + I+ + EG P A ++ + +AL
Sbjct: 74 IVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT---EGPMTPKRAIEVIADACQALN 130
Query: 129 YLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEV 188
+ H +G IHRDVK NI+I + A+K+ DFG++ + D+G+ +GT +++PE
Sbjct: 131 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE- 189
Query: 189 MQQLHG--YDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQN--APPGLDYERDK 244
Q G D ++D++S G E+ G PF+ P V ++ PP R +
Sbjct: 190 --QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVREDPIPPS---ARHE 244
Query: 245 RFSKSFKELVTACLVKDPKKR 265
S +V L K+P+ R
Sbjct: 245 GLSADLDAVVLKALAKNPENR 265
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 126/269 (46%), Gaps = 27/269 (10%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVL-----DLEKCNNDLDGIRREVQTMRVT 69
D + E++G G TV+RA VA+K+L E+ N L REV M+
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFL----REVAIMKRL 91
Query: 70 NHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIM-KSAYPEGFEEPVIATLLRETLKALV 128
HPN++ + T L +V Y++ GS ++ KS E +E ++ + K +
Sbjct: 92 RHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMN 151
Query: 129 YLHFHGH--IHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAP 186
YLH +HR++K+ N+L+D +K+ DFG+S S + GTP WMAP
Sbjct: 152 YLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL---KASTFLSSKSAAGTPEWMAP 208
Query: 187 EVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYER---D 243
EV++ + K+D++SFG+ ELA P+ P +V+ A G +R
Sbjct: 209 EVLRD-EPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVV------AAVGFKCKRLEIP 261
Query: 244 KRFSKSFKELVTACLVKDPKKRPTAEKLM 272
+ + ++ C +P KRP+ +M
Sbjct: 262 RNLNPQVAAIIEGCWTNEPWKRPSFATIM 290
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 126/273 (46%), Gaps = 17/273 (6%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKC--NNDLDGIRREVQTMRVTNH 71
+D++ + +GEG +T A + + AIK+L+ N + + RE M +H
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 72 PNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLH 131
P ++ + +F L+ + Y G L ++ F+E E + AL YLH
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLH 147
Query: 132 FHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQ 191
G IHRD+K NIL++ + I++ DFG +A + +Q N FVGT +++PE++ +
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLSPESKQARANXFVGTAQYVSPELLTE 206
Query: 192 LHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFK 251
+D+W+ G +L G PF + ++ L+Y+ ++F +
Sbjct: 207 KSACK-SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-----LEYDFPEKFFPKAR 260
Query: 252 ELVTACLVKDPKKRPTAEK------LMKHHFFK 278
+LV LV D KR E+ L H FF+
Sbjct: 261 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 293
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 134/298 (44%), Gaps = 27/298 (9%)
Query: 11 VDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVL--DLEKCNNDLDGIRREVQTMRV 68
V D+ +G+G V A E+ AIK+L D+ ++D++ E + + +
Sbjct: 16 VKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLAL 75
Query: 69 TNHPNVL-RAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKAL 127
+ P L + H F T L+ VM Y+ GG ++ ++ F+EP E L
Sbjct: 76 LDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQV--GKFKEPQAVFYAAEISIGL 133
Query: 128 VYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPE 187
+LH G I+RD+K N+++DS G IK+ADFG+ C D +R F GTP ++APE
Sbjct: 134 FFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGM--CKEHMMDGVTTRE-FCGTPDYIAPE 190
Query: 188 VMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFS 247
++ Y D W++G+ E+ G PF ++ + E + +
Sbjct: 191 II-AYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIM---------EHNVSYP 240
Query: 248 KSF-KELVTAC---LVKDPKKR----PTAEKLMKHH-FFKHARSNDFLARSIVDNLAP 296
KS KE V+ C + K P KR P E+ ++ H FF+ R I P
Sbjct: 241 KSLSKEAVSICKGLMTKHPAKRLGCGPEGERDVREHAFFRRIDWEKLENREIQPPFKP 298
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 125/273 (45%), Gaps = 17/273 (6%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKC--NNDLDGIRREVQTMRVTNH 71
+D++ + +GEG +TV A + + AIK+L+ N + + RE M +H
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 72 PNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLH 131
P ++ + +F L+ + Y G L ++ F+E E + AL YLH
Sbjct: 95 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLH 152
Query: 132 FHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQ 191
G IHRD+K NIL++ + I++ DFG +A + +Q N FVGT +++PE++ +
Sbjct: 153 GKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLSPESKQARANXFVGTAQYVSPELLTE 211
Query: 192 LHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFK 251
+D+W+ G +L G PF + ++ L+Y+ F +
Sbjct: 212 KSACK-SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-----LEYDFPAAFFPKAR 265
Query: 252 ELVTACLVKDPKKRPTAEK------LMKHHFFK 278
+LV LV D KR E+ L H FF+
Sbjct: 266 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 298
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 139/302 (46%), Gaps = 27/302 (8%)
Query: 11 VDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTN 70
+D K+ + E VG G V +A + VAIK ++ E ++ E++ + N
Sbjct: 6 IDYKEIEVEEVVGRGAFGVVCKAKWRAKD--VAIKQIESE---SERKAFIVELRQLSRVN 60
Query: 71 HPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIA-TLLRETLKALVY 129
HPN+++ + + CL VM Y GGS +++ A P + A + + + + Y
Sbjct: 61 HPNIVKLYGACLNPVCL--VMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAY 118
Query: 130 LHF---HGHIHRDVKAGNILIDSNGAI-KLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
LH IHRD+K N+L+ + G + K+ DFG +AC D Q G+ WMA
Sbjct: 119 LHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFG-TAC-----DIQTHMTNNKGSAAWMA 172
Query: 186 PEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKY--PPMKVLLMTLQNAPPGLDYERD 243
PEV + Y K D++S+GI E+ PF + P +++ P L
Sbjct: 173 PEVFEG-SNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLI---- 227
Query: 244 KRFSKSFKELVTACLVKDPKKRPTAEKLMK--HHFFKHARSNDFLARSIVDNLAPLGERF 301
K K + L+T C KDP +RP+ E+++K H ++ D + + P GE
Sbjct: 228 KNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADEPLQYPCQHSLPPGEDG 287
Query: 302 RM 303
R+
Sbjct: 288 RV 289
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 125/267 (46%), Gaps = 14/267 (5%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNND--LDGIRREVQTMRVTNH 71
+D+++ +G+G A VYRA I VAIK++D + + ++ EV+ H
Sbjct: 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH 70
Query: 72 PNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLH 131
P++L + F + +++V+ G +K+ + F E + + + ++YLH
Sbjct: 71 PSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRV-KPFSENEARHFMHQIITGMLYLH 129
Query: 132 FHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEV-MQ 190
HG +HRD+ N+L+ N IK+ADFG++ + ++ T GTP +++PE+ +
Sbjct: 130 SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHY---TLCGTPNYISPEIATR 186
Query: 191 QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSF 250
HG ++D+WS G L G PF L N DYE S
Sbjct: 187 SAHG--LESDVWSLGCMFYTLLIGRPPFDTDTVKNTL-----NKVVLADYEMPSFLSIEA 239
Query: 251 KELVTACLVKDPKKRPTAEKLMKHHFF 277
K+L+ L ++P R + ++ H F
Sbjct: 240 KDLIHQLLRRNPADRLSLSSVLDHPFM 266
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 139/302 (46%), Gaps = 27/302 (8%)
Query: 11 VDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTN 70
+D K+ + E VG G V +A + VAIK ++ E ++ E++ + N
Sbjct: 5 IDYKEIEVEEVVGRGAFGVVCKAKWRAKD--VAIKQIESE---SERKAFIVELRQLSRVN 59
Query: 71 HPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIA-TLLRETLKALVY 129
HPN+++ + + CL VM Y GGS +++ A P + A + + + + Y
Sbjct: 60 HPNIVKLYGACLNPVCL--VMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAY 117
Query: 130 LHF---HGHIHRDVKAGNILIDSNGAI-KLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
LH IHRD+K N+L+ + G + K+ DFG +AC D Q G+ WMA
Sbjct: 118 LHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFG-TAC-----DIQTHMTNNKGSAAWMA 171
Query: 186 PEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKY--PPMKVLLMTLQNAPPGLDYERD 243
PEV + Y K D++S+GI E+ PF + P +++ P L
Sbjct: 172 PEVFEG-SNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLI---- 226
Query: 244 KRFSKSFKELVTACLVKDPKKRPTAEKLMK--HHFFKHARSNDFLARSIVDNLAPLGERF 301
K K + L+T C KDP +RP+ E+++K H ++ D + + P GE
Sbjct: 227 KNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADEPLQYPCQHSLPPGEDG 286
Query: 302 RM 303
R+
Sbjct: 287 RV 288
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 129/292 (44%), Gaps = 20/292 (6%)
Query: 16 YRLYEEVGEGVSATVYRALCIP---LNEIVAIKVLD---LEKCNNDLDGIRREVQTMRVT 69
+ L +G+G V++ + +I A+KVL + + D + E +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 70 NHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEG-FEEPVIATLLRETLKALV 128
HP ++ +F TG L++++ Y++GG ++ EG F E L E AL
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLER---EGIFMEDTACFYLAEISMALG 135
Query: 129 YLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEV 188
+LH G I+RD+K NI+++ G +KL DFG+ G + F GT +MAPE+
Sbjct: 136 HLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT---VTHXFCGTIEYMAPEI 192
Query: 189 MQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ---NAPPGLDYERDKR 245
+ + G++ D WS G ++ G PF+ K + L+ N PP L E
Sbjct: 193 LMR-SGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARDL 251
Query: 246 FSKSFKELVTACLVKDPKKRPTAEKLMKHHFFKHARSNDFLARSIVDNLAPL 297
K K + L P A ++ H FF+H + LAR + PL
Sbjct: 252 LKKLLKRNAASRLGAGPGD---AGEVQAHPFFRHINWEELLARKVEPPFKPL 300
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 129/274 (47%), Gaps = 21/274 (7%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVL--DLEKCNNDLDGIRREVQTMRVTNHP 72
D+ +G+G V + +E+ A+K+L D+ ++D++ E + + + P
Sbjct: 342 DFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKP 401
Query: 73 NVL-RAHCSFTTGHCLWVVMPYMAGGSCL-HIMKSAYPEGFEEPVIATLLRETLKALVYL 130
L + H F T L+ VM Y+ GG + HI + F+EP E L +L
Sbjct: 402 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGR---FKEPHAVFYAAEIAIGLFFL 458
Query: 131 HFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
G I+RD+K N+++DS G IK+ADFG+ C + D ++ F GTP ++APE++
Sbjct: 459 QSKGIIYRDLKLDNVMLDSEGHIKIADFGM--CKENIWDGVTTK-XFCGTPDYIAPEII- 514
Query: 191 QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSF 250
Y D W+FG+ E+ G APF ++ +++ + K SK
Sbjct: 515 AYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH-----NVAYPKSMSKEA 569
Query: 251 KELVTACLVKDPKKR----PTAEKLMKHH-FFKH 279
+ + K P KR P E+ +K H FF++
Sbjct: 570 VAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRY 603
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 129/274 (47%), Gaps = 21/274 (7%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVL--DLEKCNNDLDGIRREVQTMRVTNHP 72
D+ +G+G V + +E+ A+K+L D+ ++D++ E + + + P
Sbjct: 21 DFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKP 80
Query: 73 NVL-RAHCSFTTGHCLWVVMPYMAGGSCL-HIMKSAYPEGFEEPVIATLLRETLKALVYL 130
L + H F T L+ VM Y+ GG + HI + F+EP E L +L
Sbjct: 81 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGR---FKEPHAVFYAAEIAIGLFFL 137
Query: 131 HFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
G I+RD+K N+++DS G IK+ADFG+ C + D ++ F GTP ++APE++
Sbjct: 138 QSKGIIYRDLKLDNVMLDSEGHIKIADFGM--CKENIWDGVTTK-XFCGTPDYIAPEII- 193
Query: 191 QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSF 250
Y D W+FG+ E+ G APF ++ +++ + K SK
Sbjct: 194 AYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH-----NVAYPKSMSKEA 248
Query: 251 KELVTACLVKDPKKR----PTAEKLMKHH-FFKH 279
+ + K P KR P E+ +K H FF++
Sbjct: 249 VAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRY 282
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 116/240 (48%), Gaps = 20/240 (8%)
Query: 57 DGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVI 116
+ I REV ++ HPNV+ H + + +++ +AGG + A E E
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEA 116
Query: 117 ATLLRETLKALVYLHFHGHIHRDVKAGNI-LIDSNG---AIKLADFGVSACMFDAGDRQR 172
L++ L + YLH H D+K NI L+D N IK+ DFG+ A D G+
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL-AHKIDFGNE-- 173
Query: 173 SRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ 232
+N F GTP ++APE++ +AD+WS G+ L G +PF + TL
Sbjct: 174 FKNIF-GTPAFVAPEIVN-YEPLGLEADMWSIGVITYILLSGASPFLGDTKQE----TLA 227
Query: 233 NAPPGLDYE-RDKRFSKS---FKELVTACLVKDPKKRPTAEKLMKHHFFKHARSNDFLAR 288
N ++YE D+ FS + K+ + LVKDPKKR T + ++H + K + L+R
Sbjct: 228 NVS-AVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSR 286
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 108/218 (49%), Gaps = 9/218 (4%)
Query: 7 KRFPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLD-LEKCNNDLDGIRREVQT 65
K+ + +D+ + + +G G V +++ A+K+L+ E RE +
Sbjct: 67 KQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERD 126
Query: 66 MRVTNHPN-VLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETL 124
+ V + H +F + L++VM Y GG L ++ S + + E + L E +
Sbjct: 127 VLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLL-SKFEDRLPEEMARFYLAEMV 185
Query: 125 KALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWM 184
A+ +H ++HRD+K NIL+D NG I+LADFG + + G Q S VGTP ++
Sbjct: 186 IAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSS--VAVGTPDYI 243
Query: 185 APEVMQQLHG----YDFKADIWSFGITALELAHGHAPF 218
+PE++Q + G Y + D WS G+ E+ +G PF
Sbjct: 244 SPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 125/275 (45%), Gaps = 23/275 (8%)
Query: 12 DAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNH 71
D+ Y L +++G G NE+VA+K + E+ + ++RE+ R H
Sbjct: 17 DSDRYELVKDIGAGNFGVARLMRDKQANELVAVKYI--ERGEKIDENVKREIINHRSLRH 74
Query: 72 PNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLH 131
PN++R T L +VM Y +GG + +A F E ++ + + Y H
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFERICNA--GRFSEDEARFFFQQLISGVSYAH 132
Query: 132 FHGHIHRDVKAGNILIDSNGA--IKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVM 189
HRD+K N L+D + A +K+ADFG S A + VGTP ++APEV+
Sbjct: 133 AMQVAHRDLKLENTLLDGSPAPRLKIADFGYSK----ASVLHSQPKSAVGTPAYIAPEVL 188
Query: 190 QQLHGYDFK-ADIWSFGITALELAHGHAPFSKYPPMKVL------LMTLQNAPPGLDYER 242
+ YD K AD+WS G+T + G PF K ++ +Q A P DY
Sbjct: 189 LK-KEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIP--DY-- 243
Query: 243 DKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFF 277
S + L++ V DP KR + ++ H +F
Sbjct: 244 -VHISPECRHLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 101/216 (46%), Gaps = 11/216 (5%)
Query: 62 EVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLR 121
E+ R H +V+ H F ++VV+ S L + K + EP LR
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLR 124
Query: 122 ETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTP 181
+ + YLH + IHRD+K GN+ ++ + +K+ DFG++ + G+R++ T GTP
Sbjct: 125 QIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKK---TLCGTP 181
Query: 182 CWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYE 241
++APEV+ + G+ F+ D+WS G L G PF + L +N +Y
Sbjct: 182 NYIAPEVLSK-KGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN-----EYS 235
Query: 242 RDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFF 277
K + L+ L DP RPT +L+ FF
Sbjct: 236 IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFF 271
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 101/216 (46%), Gaps = 11/216 (5%)
Query: 62 EVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLR 121
E+ R H +V+ H F ++VV+ S L + K + EP LR
Sbjct: 71 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLR 128
Query: 122 ETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTP 181
+ + YLH + IHRD+K GN+ ++ + +K+ DFG++ + G+R++ T GTP
Sbjct: 129 QIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKK---TLCGTP 185
Query: 182 CWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYE 241
++APEV+ + G+ F+ D+WS G L G PF + L +N +Y
Sbjct: 186 NYIAPEVLSK-KGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN-----EYS 239
Query: 242 RDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFF 277
K + L+ L DP RPT +L+ FF
Sbjct: 240 IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFF 275
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 101/216 (46%), Gaps = 11/216 (5%)
Query: 62 EVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLR 121
E+ R H +V+ H F ++VV+ S L + K + EP LR
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLR 124
Query: 122 ETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTP 181
+ + YLH + IHRD+K GN+ ++ + +K+ DFG++ + G+R++ T GTP
Sbjct: 125 QIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKK---TLCGTP 181
Query: 182 CWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYE 241
++APEV+ + G+ F+ D+WS G L G PF + L +N +Y
Sbjct: 182 NYIAPEVLSK-KGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN-----EYS 235
Query: 242 RDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFF 277
K + L+ L DP RPT +L+ FF
Sbjct: 236 IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFF 271
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 129/279 (46%), Gaps = 25/279 (8%)
Query: 16 YRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDG-----IRREVQTMRVTN 70
Y + EE+G G A V + + A K + + + G I REV +R
Sbjct: 28 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIR 87
Query: 71 HPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYL 130
HPN++ H F + +++ ++GG + A E E L++ L + YL
Sbjct: 88 HPNIITLHDIFENKTDVVLILELVSGGELFDFL--AEKESLTEDEATQFLKQILDGVHYL 145
Query: 131 HFHGHIHRDVKAGNI-LIDSNG---AIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAP 186
H H D+K NI L+D N IKL DFG+ A +AG+ +N F GTP ++AP
Sbjct: 146 HSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGI-AHKIEAGN--EFKNIF-GTPEFVAP 201
Query: 187 EVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRF 246
E++ +AD+WS G+ L G +PF + TL N ++Y+ D+ +
Sbjct: 202 EIV-NYEPLGLEADMWSIGVITYILLSGASPFLGETKQE----TLTNI-SAVNYDFDEEY 255
Query: 247 ----SKSFKELVTACLVKDPKKRPTAEKLMKHHFFKHAR 281
S+ K+ + LVKDPK+R + ++H + K R
Sbjct: 256 FSNTSELAKDFIRRLLVKDPKRRMXIAQSLEHSWIKAIR 294
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 126/276 (45%), Gaps = 19/276 (6%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEK----CNNDLD---GIRREVQTMR 67
+Y + + +G G V A + VAIK++ K + D + E++ ++
Sbjct: 10 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 69
Query: 68 VTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKAL 127
NHP +++ +F ++V+ M GG K + +E + L A+
Sbjct: 70 KLNHPCIIKIK-NFFDAEDYYIVLELMEGGELFD--KVVGNKRLKEATCKLYFYQMLLAV 126
Query: 128 VYLHFHGHIHRDVKAGNILIDS---NGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWM 184
YLH +G IHRD+K N+L+ S + IK+ DFG S + G+ R T GTP ++
Sbjct: 127 QYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL---GETSLMR-TLCGTPTYL 182
Query: 185 APEVMQQL--HGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYER 242
APEV+ + GY+ D WS G+ G+ PFS++ L + + E
Sbjct: 183 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEV 242
Query: 243 DKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFK 278
S+ +LV LV DPK R T E+ ++H + +
Sbjct: 243 WAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 278
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 126/276 (45%), Gaps = 19/276 (6%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEK----CNNDLD---GIRREVQTMR 67
+Y + + +G G V A + VAIK++ K + D + E++ ++
Sbjct: 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 70
Query: 68 VTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKAL 127
NHP +++ +F ++V+ M GG K + +E + L A+
Sbjct: 71 KLNHPCIIKIK-NFFDAEDYYIVLELMEGGELFD--KVVGNKRLKEATCKLYFYQMLLAV 127
Query: 128 VYLHFHGHIHRDVKAGNILIDS---NGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWM 184
YLH +G IHRD+K N+L+ S + IK+ DFG S + G+ R T GTP ++
Sbjct: 128 QYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL---GETSLMR-TLCGTPTYL 183
Query: 185 APEVMQQL--HGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYER 242
APEV+ + GY+ D WS G+ G+ PFS++ L + + E
Sbjct: 184 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEV 243
Query: 243 DKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFK 278
S+ +LV LV DPK R T E+ ++H + +
Sbjct: 244 WAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 127/271 (46%), Gaps = 15/271 (5%)
Query: 10 PVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLD---LEKCNNDLDGIRREVQTM 66
P K Y +G+G A Y + E+ A KV+ L K + + + E+
Sbjct: 38 PRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQK-EKMSTEIAIH 96
Query: 67 RVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKA 126
+ ++P+V+ H F ++VV+ S L + K + EP +R+T++
Sbjct: 97 KSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRR--KAVTEPEARYFMRQTIQG 154
Query: 127 LVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAP 186
+ YLH + IHRD+K GN+ ++ + +K+ DFG++ + G+R++ T GTP ++AP
Sbjct: 155 VQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKK---TLCGTPNYIAP 211
Query: 187 EVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRF 246
EV+ + G+ F+ DIWS G L G PF + + +N +Y +
Sbjct: 212 EVLCK-KGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN-----EYSVPRHI 265
Query: 247 SKSFKELVTACLVKDPKKRPTAEKLMKHHFF 277
+ L+ L DP RP+ +L+ FF
Sbjct: 266 NPVASALIRRMLHADPTLRPSVAELLTDEFF 296
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 126/276 (45%), Gaps = 19/276 (6%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEK----CNNDLD---GIRREVQTMR 67
+Y + + +G G V A + VAIK++ K + D + E++ ++
Sbjct: 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 70
Query: 68 VTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKAL 127
NHP +++ +F ++V+ M GG K + +E + L A+
Sbjct: 71 KLNHPCIIKIK-NFFDAEDYYIVLELMEGGELFD--KVVGNKRLKEATCKLYFYQMLLAV 127
Query: 128 VYLHFHGHIHRDVKAGNILIDS---NGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWM 184
YLH +G IHRD+K N+L+ S + IK+ DFG S + G+ R T GTP ++
Sbjct: 128 QYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL---GETSLMR-TLCGTPTYL 183
Query: 185 APEVMQQL--HGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYER 242
APEV+ + GY+ D WS G+ G+ PFS++ L + + E
Sbjct: 184 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEV 243
Query: 243 DKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFK 278
S+ +LV LV DPK R T E+ ++H + +
Sbjct: 244 WAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 126/276 (45%), Gaps = 19/276 (6%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEK----CNNDLD---GIRREVQTMR 67
+Y + + +G G V A + VAIK++ K + D + E++ ++
Sbjct: 17 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 76
Query: 68 VTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKAL 127
NHP +++ +F ++V+ M GG K + +E + L A+
Sbjct: 77 KLNHPCIIKIK-NFFDAEDYYIVLELMEGGELFD--KVVGNKRLKEATCKLYFYQMLLAV 133
Query: 128 VYLHFHGHIHRDVKAGNILIDS---NGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWM 184
YLH +G IHRD+K N+L+ S + IK+ DFG S + G+ R T GTP ++
Sbjct: 134 QYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL---GETSLMR-TLCGTPTYL 189
Query: 185 APEVMQQL--HGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYER 242
APEV+ + GY+ D WS G+ G+ PFS++ L + + E
Sbjct: 190 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEV 249
Query: 243 DKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFK 278
S+ +LV LV DPK R T E+ ++H + +
Sbjct: 250 WAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 285
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 126/276 (45%), Gaps = 19/276 (6%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEK----CNNDLD---GIRREVQTMR 67
+Y + + +G G V A + VAIK++ K + D + E++ ++
Sbjct: 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 70
Query: 68 VTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKAL 127
NHP +++ +F ++V+ M GG K + +E + L A+
Sbjct: 71 KLNHPCIIKIK-NFFDAEDYYIVLELMEGGELFD--KVVGNKRLKEATCKLYFYQMLLAV 127
Query: 128 VYLHFHGHIHRDVKAGNILIDS---NGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWM 184
YLH +G IHRD+K N+L+ S + IK+ DFG S + G+ R T GTP ++
Sbjct: 128 QYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL---GETSLMR-TLCGTPTYL 183
Query: 185 APEVMQQL--HGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYER 242
APEV+ + GY+ D WS G+ G+ PFS++ L + + E
Sbjct: 184 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEV 243
Query: 243 DKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFK 278
S+ +LV LV DPK R T E+ ++H + +
Sbjct: 244 WAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 125/290 (43%), Gaps = 20/290 (6%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLD----LEKCNNDLDGIRREVQTMRVTN 70
D+ + +G+G V A A+KVL L+K R V ++
Sbjct: 39 DFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNV-LLKNVK 97
Query: 71 HPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYL 130
HP ++ H SF T L+ V+ Y+ GG + ++ F EP E AL YL
Sbjct: 98 HPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRE--RCFLEPRARFYAAEIASALGYL 155
Query: 131 HFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
H ++RD+K NIL+DS G I L DFG+ + + + +TF GTP ++APEV+
Sbjct: 156 HSLNIVYRDLKPENILLDSQGHIVLTDFGLCK---ENIEHNSTTSTFCGTPEYLAPEVLH 212
Query: 191 QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSF 250
+ YD D W G E+ +G PF + + + N P L + S
Sbjct: 213 K-QPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE-MYDNILNKPLQL----KPNITNSA 266
Query: 251 KELVTACLVKDPKKRPTAE----KLMKHHFFKHARSNDFLARSIVDNLAP 296
+ L+ L KD KR A+ ++ H FF +D + + I P
Sbjct: 267 RHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLINWDDLINKKITPPFNP 316
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 115/258 (44%), Gaps = 16/258 (6%)
Query: 17 RLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLR 76
RL ++G+G V+ N + + L+ N + +E Q M+ H +++
Sbjct: 188 RLEVKLGQGCFGEVWMGT---WNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQ 244
Query: 77 AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHI 136
+ + + +++V YM+ GS L +K + P + + + + Y+ ++
Sbjct: 245 LY-AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 303
Query: 137 HRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPC-WMAPEVMQQLHG- 194
HRD++A NIL+ N K+ADFG+ + D R F P W APE L+G
Sbjct: 304 HRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKF---PIKWTAPEAA--LYGR 358
Query: 195 YDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKEL 253
+ K+D+WSFGI EL G P+ P V L G +S +L
Sbjct: 359 FTIKSDVWSFGILLTELTTKGRVPY----PGMVNREVLDQVERGYRMPCPPECPESLHDL 414
Query: 254 VTACLVKDPKKRPTAEKL 271
+ C KDP++RPT E L
Sbjct: 415 MCQCWRKDPEERPTFEYL 432
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 132/281 (46%), Gaps = 26/281 (9%)
Query: 12 DAKD-YRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDG-----IRREVQT 65
D +D Y + EE+G G A V + + A K + + ++ G I REV
Sbjct: 9 DVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNI 68
Query: 66 MRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
+R HPN++ H F + +++ ++GG + A E E L++ L
Sbjct: 69 LREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL--AEKESLTEDEATQFLKQILD 126
Query: 126 ALVYLHFHGHIHRDVKAGNI-LIDSNG---AIKLADFGVSACMFDAGDRQRSRNTFVGTP 181
+ YLH H D+K NI L+D N IKL DFG+ A +AG+ +N F GTP
Sbjct: 127 GVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGI-AHKIEAGN--EFKNIF-GTP 182
Query: 182 CWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYE 241
++APE++ +AD+WS G+ L G +PF + TL N ++Y+
Sbjct: 183 EFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGETKQE----TLTNI-SAVNYD 236
Query: 242 RDKRF----SKSFKELVTACLVKDPKKRPTAEKLMKHHFFK 278
D+ + S+ K+ + LVKDPK+R + ++H + K
Sbjct: 237 FDEEYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLEHSWIK 277
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 115/238 (48%), Gaps = 20/238 (8%)
Query: 59 IRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIAT 118
I REV ++ HPNV+ H + + +++ +AGG + A E E
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATE 118
Query: 119 LLRETLKALVYLHFHGHIHRDVKAGNI-LIDSNGA---IKLADFGVSACMFDAGDRQRSR 174
L++ L + YLH H D+K NI L+D N IK+ DFG+ A D G+ +
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL-AHKIDFGNE--FK 175
Query: 175 NTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNA 234
N F GTP ++APE++ +AD+WS G+ L G +PF + TL N
Sbjct: 176 NIF-GTPEFVAPEIVN-YEPLGLEADMWSIGVITYILLSGASPFLGDTKQE----TLANV 229
Query: 235 PPGLDYE-RDKRFSKS---FKELVTACLVKDPKKRPTAEKLMKHHFFKHARSNDFLAR 288
++YE D+ FS + K+ + LVKDPKKR T + ++H + K + L+R
Sbjct: 230 S-AVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSR 286
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 134/293 (45%), Gaps = 22/293 (7%)
Query: 1 MDLVVEKR--FPVDAKD-YRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEK----CN 53
DL V+ + +P +D Y + + +G G V A + VAI+++ K
Sbjct: 133 FDLTVDDQSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSA 192
Query: 54 NDLD---GIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEG 110
+ D + E++ ++ NHP +++ +F ++V+ M GG K +
Sbjct: 193 READPALNVETEIEILKKLNHPCIIKIK-NFFDAEDYYIVLELMEGGELFD--KVVGNKR 249
Query: 111 FEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDS---NGAIKLADFGVSACMFDA 167
+E + L A+ YLH +G IHRD+K N+L+ S + IK+ DFG S +
Sbjct: 250 LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--- 306
Query: 168 GDRQRSRNTFVGTPCWMAPEVMQQL--HGYDFKADIWSFGITALELAHGHAPFSKYPPMK 225
G+ R T GTP ++APEV+ + GY+ D WS G+ G+ PFS++
Sbjct: 307 GETSLMR-TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV 365
Query: 226 VLLMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFK 278
L + + E S+ +LV LV DPK R T E+ ++H + +
Sbjct: 366 SLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 418
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 134/293 (45%), Gaps = 22/293 (7%)
Query: 1 MDLVVEKR--FPVDAKD-YRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEK----CN 53
DL V+ + +P +D Y + + +G G V A + VAI+++ K
Sbjct: 119 FDLTVDDQSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSA 178
Query: 54 NDLD---GIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEG 110
+ D + E++ ++ NHP +++ +F ++V+ M GG K +
Sbjct: 179 READPALNVETEIEILKKLNHPCIIKIK-NFFDAEDYYIVLELMEGGELFD--KVVGNKR 235
Query: 111 FEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDS---NGAIKLADFGVSACMFDA 167
+E + L A+ YLH +G IHRD+K N+L+ S + IK+ DFG S +
Sbjct: 236 LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--- 292
Query: 168 GDRQRSRNTFVGTPCWMAPEVMQQL--HGYDFKADIWSFGITALELAHGHAPFSKYPPMK 225
G+ R T GTP ++APEV+ + GY+ D WS G+ G+ PFS++
Sbjct: 293 GETSLMR-TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV 351
Query: 226 VLLMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFK 278
L + + E S+ +LV LV DPK R T E+ ++H + +
Sbjct: 352 SLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 404
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 127/276 (46%), Gaps = 25/276 (9%)
Query: 16 YRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDG-----IRREVQTMRVTN 70
Y EE+G GV A V + A K + + + G I REV ++
Sbjct: 13 YDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 71 HPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYL 130
HPNV+ H + + +++ +AGG + A E E L++ L + YL
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVYYL 130
Query: 131 HFHGHIHRDVKAGNI-LIDSNGA---IKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAP 186
H H D+K NI L+D N IK+ DFG+ A D G+ +N F GTP ++AP
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL-AHKIDFGNE--FKNIF-GTPEFVAP 186
Query: 187 EVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYE-RDKR 245
E++ +AD+WS G+ L G +PF + TL N ++YE D+
Sbjct: 187 EIVN-YEPLGLEADMWSIGVITYILLSGASPFLGDTKQE----TLANVS-AVNYEFEDEY 240
Query: 246 FSKS---FKELVTACLVKDPKKRPTAEKLMKHHFFK 278
FS + K+ + LVKDPKKR T + ++H + K
Sbjct: 241 FSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 116/240 (48%), Gaps = 20/240 (8%)
Query: 57 DGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVI 116
+ I REV ++ HPNV+ H + + +++ +AGG + A E E
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEA 116
Query: 117 ATLLRETLKALVYLHFHGHIHRDVKAGNI-LIDSNGA---IKLADFGVSACMFDAGDRQR 172
L++ L + YLH H D+K NI L+D N IK+ DFG+ A D G+
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL-AHKIDFGNE-- 173
Query: 173 SRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ 232
+N F GTP ++APE++ +AD+WS G+ L G +PF + TL
Sbjct: 174 FKNIF-GTPEFVAPEIVN-YEPLGLEADMWSIGVITYILLSGASPFLGDTKQE----TLA 227
Query: 233 NAPPGLDYE-RDKRFSKS---FKELVTACLVKDPKKRPTAEKLMKHHFFKHARSNDFLAR 288
N ++YE D+ FS + K+ + LVKDPKKR T + ++H + K + L+R
Sbjct: 228 NVS-AVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSR 286
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 115/220 (52%), Gaps = 15/220 (6%)
Query: 57 DGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVI 116
D +E QTM +HP +++ + + + +++V Y++ G L+ ++S + +G E +
Sbjct: 48 DEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRS-HGKGLEPSQL 106
Query: 117 ATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNT 176
+ + + + +L H IHRD+ A N L+D + +K++DFG++ + D D+ S
Sbjct: 107 LEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLD--DQYVSS-- 162
Query: 177 FVGTPC---WMAPEVMQQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQ 232
VGT W APEV Y K+D+W+FGI E+ + G P+ Y +V+L Q
Sbjct: 163 -VGTKFPVKWSAPEVFHYFK-YSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQ 220
Query: 233 NAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLM 272
G R S + +++ +C + P+KRPT ++L+
Sbjct: 221 ----GHRLYRPHLASDTIYQIMYSCWHELPEKRPTFQQLL 256
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 116/240 (48%), Gaps = 20/240 (8%)
Query: 57 DGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVI 116
+ I REV ++ HPNV+ H + + +++ +AGG + A E E
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEA 116
Query: 117 ATLLRETLKALVYLHFHGHIHRDVKAGNI-LIDSNG---AIKLADFGVSACMFDAGDRQR 172
L++ L + YLH H D+K NI L+D N IK+ DFG+ A D G+
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL-AHKIDFGNE-- 173
Query: 173 SRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ 232
+N F GTP ++APE++ +AD+WS G+ L G +PF + TL
Sbjct: 174 FKNIF-GTPEFVAPEIVN-YEPLGLEADMWSIGVITYILLSGASPFLGDTKQE----TLA 227
Query: 233 NAPPGLDYE-RDKRFSKS---FKELVTACLVKDPKKRPTAEKLMKHHFFKHARSNDFLAR 288
N ++YE D+ FS + K+ + LVKDPKKR T + ++H + K + L+R
Sbjct: 228 NVS-AVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSR 286
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 101/203 (49%), Gaps = 9/203 (4%)
Query: 13 AKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRR----EVQTMRV 68
AK Y + +GEG ATVY+A N+IVAIK + L + DGI R E++ ++
Sbjct: 9 AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQE 68
Query: 69 TNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALV 128
+HPN++ +F + +V +M + L ++ I + TL+ L
Sbjct: 69 LSHPNIIGLLDAFGHKSNISLVFDFME--TDLEVIIKDNSLVLTPSHIKAYMLMTLQGLE 126
Query: 129 YLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEV 188
YLH H +HRD+K N+L+D NG +KLADFG++ G R+ V T + APE+
Sbjct: 127 YLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSF---GSPNRAYXHQVVTRWYRAPEL 183
Query: 189 MQQLHGYDFKADIWSFGITALEL 211
+ Y D+W+ G EL
Sbjct: 184 LFGARMYGVGVDMWAVGCILAEL 206
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 116/240 (48%), Gaps = 20/240 (8%)
Query: 57 DGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVI 116
+ I REV ++ HPNV+ H + + +++ +AGG + A E E
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEA 116
Query: 117 ATLLRETLKALVYLHFHGHIHRDVKAGNI-LIDSNGA---IKLADFGVSACMFDAGDRQR 172
L++ L + YLH H D+K NI L+D N IK+ DFG+ A D G+
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL-AHKIDFGNE-- 173
Query: 173 SRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ 232
+N F GTP ++APE++ +AD+WS G+ L G +PF + TL
Sbjct: 174 FKNIF-GTPEFVAPEIVN-YEPLGLEADMWSIGVITYILLSGASPFLGDTKQE----TLA 227
Query: 233 NAPPGLDYE-RDKRFSKS---FKELVTACLVKDPKKRPTAEKLMKHHFFKHARSNDFLAR 288
N ++YE D+ FS + K+ + LVKDPKKR T + ++H + K + L+R
Sbjct: 228 NVS-AVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSR 286
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 130/301 (43%), Gaps = 28/301 (9%)
Query: 8 RFPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEK--CNNDLDGIRREVQT 65
R V D+ + +G+G V A+K+L E +++ E +
Sbjct: 2 RAKVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRV 61
Query: 66 MRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL-HIMKSAYPEGFEEPVIATLLRETL 124
++ T HP + +F T L VM Y GG H+ + F E E +
Sbjct: 62 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV---FTEERARFYGAEIV 118
Query: 125 KALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWM 184
AL YLH ++RD+K N+++D +G IK+ DFG+ G + TF GTP ++
Sbjct: 119 SALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG---ATMKTFCGTPEYL 175
Query: 185 APEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDK 244
APEV++ + Y D W G+ E+ G PF ++ + L +
Sbjct: 176 APEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME---------EI 225
Query: 245 RFSKSF----KELVTACLVKDPKKR----PT-AEKLMKHHFFKHARSNDFLARSIVDNLA 295
RF ++ K L+ L KDPK+R P+ A+++M+H FF D + + ++
Sbjct: 226 RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFK 285
Query: 296 P 296
P
Sbjct: 286 P 286
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 11/216 (5%)
Query: 62 EVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLR 121
E+ R H +V+ H F ++VV+ S L + K + EP LR
Sbjct: 91 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLR 148
Query: 122 ETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTP 181
+ + YLH + IHRD+K GN+ ++ + +K+ DFG++ + G+R++ GTP
Sbjct: 149 QIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKK---VLCGTP 205
Query: 182 CWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYE 241
++APEV+ + G+ F+ D+WS G L G PF + L +N +Y
Sbjct: 206 NYIAPEVLSK-KGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN-----EYS 259
Query: 242 RDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFF 277
K + L+ L DP RPT +L+ FF
Sbjct: 260 IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFF 295
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 11/216 (5%)
Query: 62 EVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLR 121
E+ R H +V+ H F ++VV+ S L + K + EP LR
Sbjct: 89 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLR 146
Query: 122 ETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTP 181
+ + YLH + IHRD+K GN+ ++ + +K+ DFG++ + G+R++ GTP
Sbjct: 147 QIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKK---VLCGTP 203
Query: 182 CWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYE 241
++APEV+ + G+ F+ D+WS G L G PF + L +N +Y
Sbjct: 204 NYIAPEVLSK-KGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN-----EYS 257
Query: 242 RDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFF 277
K + L+ L DP RPT +L+ FF
Sbjct: 258 IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFF 293
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 129/298 (43%), Gaps = 28/298 (9%)
Query: 11 VDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEK--CNNDLDGIRREVQTMRV 68
V D+ + +G+G V A+K+L E +++ E + ++
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 69 TNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL-HIMKSAYPEGFEEPVIATLLRETLKAL 127
T HP + +F T L VM Y GG H+ + F E E + AL
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV---FTEERARFYGAEIVSAL 118
Query: 128 VYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPE 187
YLH ++RD+K N+++D +G IK+ DFG+ G + TF GTP ++APE
Sbjct: 119 EYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG---ATMKTFCGTPEYLAPE 175
Query: 188 VMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFS 247
V++ + Y D W G+ E+ G PF ++ + L + RF
Sbjct: 176 VLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME---------EIRFP 225
Query: 248 KSF----KELVTACLVKDPKKR----PT-AEKLMKHHFFKHARSNDFLARSIVDNLAP 296
++ K L+ L KDPK+R P+ A+++M+H FF D + + ++ P
Sbjct: 226 RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKP 283
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 122/276 (44%), Gaps = 18/276 (6%)
Query: 9 FPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNN-DLDGIRREVQTMR 67
P A+DY + +G G + +I+ K LD + + EV +R
Sbjct: 1 MPSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLR 60
Query: 68 VTNHPNVLRAHCSFT--TGHCLWVVMPYMAGGSCLHIMKSAYPEG--FEEPVIATLLRET 123
HPN++R + T L++VM Y GG ++ E +E + ++ +
Sbjct: 61 ELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQL 120
Query: 124 LKALVYLHF-----HGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFV 178
AL H H +HRD+K N+ +D +KL DFG++ + D + FV
Sbjct: 121 TLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKE---FV 177
Query: 179 GTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGL 238
GTP +M+PE M ++ Y+ K+DIWS G EL PF+ + ++ + +
Sbjct: 178 GTPYYMSPEQMNRM-SYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRI 236
Query: 239 DYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKH 274
Y R+S E++T L RP+ E+++++
Sbjct: 237 PY----RYSDELNEIITRMLNLKDYHRPSVEEILEN 268
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 126/271 (46%), Gaps = 15/271 (5%)
Query: 10 PVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLD---LEKCNNDLDGIRREVQTM 66
P K Y +G+G A Y + E+ A KV+ L K + + + E+
Sbjct: 22 PRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQK-EKMSTEIAIH 80
Query: 67 RVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKA 126
+ ++P+V+ H F ++VV+ S L + K + EP +R+T++
Sbjct: 81 KSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRR--KAVTEPEARYFMRQTIQG 138
Query: 127 LVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAP 186
+ YLH + IHRD+K GN+ ++ + +K+ DFG++ + G+R++ GTP ++AP
Sbjct: 139 VQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKD---LCGTPNYIAP 195
Query: 187 EVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRF 246
EV+ + G+ F+ DIWS G L G PF + + +N +Y +
Sbjct: 196 EVLCK-KGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN-----EYSVPRHI 249
Query: 247 SKSFKELVTACLVKDPKKRPTAEKLMKHHFF 277
+ L+ L DP RP+ +L+ FF
Sbjct: 250 NPVASALIRRMLHADPTLRPSVAELLTDEFF 280
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 125/270 (46%), Gaps = 13/270 (4%)
Query: 10 PVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVL--DLEKCNNDLDGIRREVQTMR 67
P K Y +G+G A Y + E+ A KV+ + + + + E+ +
Sbjct: 38 PRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHK 97
Query: 68 VTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKAL 127
++P+V+ H F ++VV+ S L + K + EP +R+T++ +
Sbjct: 98 SLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRR--KAVTEPEARYFMRQTIQGV 155
Query: 128 VYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPE 187
YLH + IHRD+K GN+ ++ + +K+ DFG++ + G+R++ GTP ++APE
Sbjct: 156 QYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKD---LCGTPNYIAPE 212
Query: 188 VMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFS 247
V+ + G+ F+ DIWS G L G PF + + +N +Y + +
Sbjct: 213 VLCK-KGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN-----EYSVPRHIN 266
Query: 248 KSFKELVTACLVKDPKKRPTAEKLMKHHFF 277
L+ L DP RP+ +L+ FF
Sbjct: 267 PVASALIRRMLHADPTLRPSVAELLTDEFF 296
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 126/271 (46%), Gaps = 15/271 (5%)
Query: 10 PVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLD---LEKCNNDLDGIRREVQTM 66
P K Y +G+G A Y + E+ A KV+ L K + + + E+
Sbjct: 38 PRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQK-EKMSTEIAIH 96
Query: 67 RVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKA 126
+ ++P+V+ H F ++VV+ S L + K + EP +R+T++
Sbjct: 97 KSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRR--KAVTEPEARYFMRQTIQG 154
Query: 127 LVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAP 186
+ YLH + IHRD+K GN+ ++ + +K+ DFG++ + G+R++ GTP ++AP
Sbjct: 155 VQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKX---LCGTPNYIAP 211
Query: 187 EVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRF 246
EV+ + G+ F+ DIWS G L G PF + + +N +Y +
Sbjct: 212 EVLCK-KGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN-----EYSVPRHI 265
Query: 247 SKSFKELVTACLVKDPKKRPTAEKLMKHHFF 277
+ L+ L DP RP+ +L+ FF
Sbjct: 266 NPVASALIRRMLHADPTLRPSVAELLTDEFF 296
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 128/262 (48%), Gaps = 12/262 (4%)
Query: 16 YRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVL 75
Y ++EE+G G V+R A K + + +D + +R+E+QTM V HP ++
Sbjct: 53 YDIHEELGTGAFGVVHRVTERATGNNFAAKFV-MTPHESDKETVRKEIQTMSVLRHPTLV 111
Query: 76 RAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGH 135
H +F + + ++ +M+GG + + + E+ + +R+ K L ++H + +
Sbjct: 112 NLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVE-YMRQVCKGLCHMHENNY 170
Query: 136 IHRDVKAGNILIDS--NGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ-QL 192
+H D+K NI+ + + +KL DFG++A + D ++S GT + APEV + +
Sbjct: 171 VHLDLKPENIMFTTKRSNELKLIDFGLTAHL----DPKQSVKVTTGTAEFAAPEVAEGKP 226
Query: 193 HGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKE 252
GY D+WS G+ + L G +PF + L +++ +D S+ K+
Sbjct: 227 VGY--YTDMWSVGVLSYILLSGLSPFGGENDDET-LRNVKSCDWNMDDSAFSGISEDGKD 283
Query: 253 LVTACLVKDPKKRPTAEKLMKH 274
+ L+ DP R T + ++H
Sbjct: 284 FIRKLLLADPNTRMTIHQALEH 305
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 129/298 (43%), Gaps = 28/298 (9%)
Query: 11 VDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEK--CNNDLDGIRREVQTMRV 68
V D+ + +G+G V A+K+L E +++ E + ++
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 69 TNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL-HIMKSAYPEGFEEPVIATLLRETLKAL 127
T HP + +F T L VM Y GG H+ + F E E + AL
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV---FTEERARFYGAEIVSAL 118
Query: 128 VYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPE 187
YLH ++RD+K N+++D +G IK+ DFG+ G + TF GTP ++APE
Sbjct: 119 EYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG---ATMKTFCGTPEYLAPE 175
Query: 188 VMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFS 247
V++ + Y D W G+ E+ G PF ++ + L + RF
Sbjct: 176 VLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME---------EIRFP 225
Query: 248 KSF----KELVTACLVKDPKKR----PT-AEKLMKHHFFKHARSNDFLARSIVDNLAP 296
++ K L+ L KDPK+R P+ A+++M+H FF D + + ++ P
Sbjct: 226 RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKP 283
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 105/218 (48%), Gaps = 9/218 (4%)
Query: 7 KRFPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLD-LEKCNNDLDGIRREVQT 65
K + +D+ + + +G G V I A+K+L+ E RE +
Sbjct: 83 KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERD 142
Query: 66 MRVTNHPNVLRA-HCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETL 124
+ V + A H +F + L++VM Y GG L ++ S + + E + + E +
Sbjct: 143 VLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLL-SKFEDKLPEDMARFYIGEMV 201
Query: 125 KALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWM 184
A+ +H ++HRD+K N+L+D NG I+LADFG M D G Q S VGTP ++
Sbjct: 202 LAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSS--VAVGTPDYI 259
Query: 185 APEVMQQLHG----YDFKADIWSFGITALELAHGHAPF 218
+PE++Q + Y + D WS G+ E+ +G PF
Sbjct: 260 SPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF 297
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 118/260 (45%), Gaps = 7/260 (2%)
Query: 16 YRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDL--EKCNNDLDGIRREVQTMRVTNHPN 73
Y++ +++G G +TVY A LN VAIK + + + L REV +H N
Sbjct: 13 YKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQN 72
Query: 74 VLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFH 133
++ C ++VM Y+ G + ++S P + + + L + + H
Sbjct: 73 IVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAI--NFTNQILDGIKHAHDM 130
Query: 134 GHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLH 193
+HRD+K NILIDSN +K+ DFG++ + + Q N +GT + +PE +
Sbjct: 131 RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQ--TNHVLGTVQYFSPE-QAKGE 187
Query: 194 GYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKEL 253
D DI+S GI E+ G PF+ + + + +Q++ P + + K +S +
Sbjct: 188 ATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNV 247
Query: 254 VTACLVKDPKKRPTAEKLMK 273
+ KD R + MK
Sbjct: 248 ILRATEKDKANRYKTIQEMK 267
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 116/258 (44%), Gaps = 16/258 (6%)
Query: 17 RLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLR 76
RL ++G+G V+ N + + L+ + +E Q M+ H +++
Sbjct: 21 RLEVKLGQGCFGEVWMGT---WNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ 77
Query: 77 AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHI 136
+ + + +++V+ YM+ GS L +K + P + + + + Y+ ++
Sbjct: 78 LY-AVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 136
Query: 137 HRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPC-WMAPEVMQQLHG- 194
HRD++A NIL+ N K+ADFG++ + D R F P W APE L+G
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKF---PIKWTAPEA--ALYGR 191
Query: 195 YDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKEL 253
+ K+D+WSFGI EL G P+ P V L G +S +L
Sbjct: 192 FTIKSDVWSFGILLTELTTKGRVPY----PGMVNREVLDQVERGYRMPCPPECPESLHDL 247
Query: 254 VTACLVKDPKKRPTAEKL 271
+ C KDP++RPT E L
Sbjct: 248 MCQCWRKDPEERPTFEYL 265
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 105/218 (48%), Gaps = 9/218 (4%)
Query: 7 KRFPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLD-LEKCNNDLDGIRREVQT 65
K + +D+ + + +G G V I A+K+L+ E RE +
Sbjct: 67 KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERD 126
Query: 66 MRVTNHPNVLRA-HCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETL 124
+ V + A H +F + L++VM Y GG L ++ S + + E + + E +
Sbjct: 127 VLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLL-SKFEDKLPEDMARFYIGEMV 185
Query: 125 KALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWM 184
A+ +H ++HRD+K N+L+D NG I+LADFG M D G Q S VGTP ++
Sbjct: 186 LAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSS--VAVGTPDYI 243
Query: 185 APEVMQQLHG----YDFKADIWSFGITALELAHGHAPF 218
+PE++Q + Y + D WS G+ E+ +G PF
Sbjct: 244 SPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 121/276 (43%), Gaps = 18/276 (6%)
Query: 9 FPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNN-DLDGIRREVQTMR 67
P A+DY + +G G + +I+ K LD + + EV +R
Sbjct: 1 MPSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLR 60
Query: 68 VTNHPNVLRAHCSFT--TGHCLWVVMPYMAGGSCLHIMKSAYPEG--FEEPVIATLLRET 123
HPN++R + T L++VM Y GG ++ E +E + ++ +
Sbjct: 61 ELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQL 120
Query: 124 LKALVYLHF-----HGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFV 178
AL H H +HRD+K N+ +D +KL DFG++ + TFV
Sbjct: 121 TLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL---NHDTSFAKTFV 177
Query: 179 GTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGL 238
GTP +M+PE M ++ Y+ K+DIWS G EL PF+ + ++ + +
Sbjct: 178 GTPYYMSPEQMNRM-SYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRI 236
Query: 239 DYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKH 274
Y R+S E++T L RP+ E+++++
Sbjct: 237 PY----RYSDELNEIITRMLNLKDYHRPSVEEILEN 268
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 112/230 (48%), Gaps = 20/230 (8%)
Query: 57 DGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVI 116
+ I REV ++ HPNV+ H + + +++ +AGG + A E E
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEA 116
Query: 117 ATLLRETLKALVYLHFHGHIHRDVKAGNI-LIDSNGA---IKLADFGVSACMFDAGDRQR 172
L++ L + YLH H D+K NI L+D N IK+ DFG+ A D G+
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL-AHKIDFGNE-- 173
Query: 173 SRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ 232
+N F GTP ++APE++ +AD+WS G+ L G +PF + TL
Sbjct: 174 FKNIF-GTPEFVAPEIVN-YEPLGLEADMWSIGVITYILLSGASPFLGDTKQE----TLA 227
Query: 233 NAPPGLDYE-RDKRFSKS---FKELVTACLVKDPKKRPTAEKLMKHHFFK 278
N ++YE D+ FS + K+ + LVKDPKKR T + ++H + K
Sbjct: 228 NVS-AVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 11/216 (5%)
Query: 62 EVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLR 121
E+ R H +V+ H F ++VV+ S L + K + EP LR
Sbjct: 65 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLR 122
Query: 122 ETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTP 181
+ + YLH + IHRD+K GN+ ++ + +K+ DFG++ + G+R++ GTP
Sbjct: 123 QIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKK---VLCGTP 179
Query: 182 CWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYE 241
++APEV+ + G+ F+ D+WS G L G PF + L +N +Y
Sbjct: 180 NYIAPEVLSK-KGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN-----EYS 233
Query: 242 RDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFF 277
K + L+ L DP RPT +L+ FF
Sbjct: 234 IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFF 269
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 127/264 (48%), Gaps = 10/264 (3%)
Query: 16 YRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVL 75
Y ++EE+G G V+R A K + + +D + +R+E+QTM V HP ++
Sbjct: 159 YDIHEELGTGAFGVVHRVTERATGNNFAAKFV-MTPHESDKETVRKEIQTMSVLRHPTLV 217
Query: 76 RAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGH 135
H +F + + ++ +M+GG + + + E+ + +R+ K L ++H + +
Sbjct: 218 NLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVE-YMRQVCKGLCHMHENNY 276
Query: 136 IHRDVKAGNILIDS--NGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLH 193
+H D+K NI+ + + +KL DFG++A + D ++S GT + APEV +
Sbjct: 277 VHLDLKPENIMFTTKRSNELKLIDFGLTAHL----DPKQSVKVTTGTAEFAAPEVAEG-K 331
Query: 194 GYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKEL 253
+ D+WS G+ + L G +PF + L +++ +D S+ K+
Sbjct: 332 PVGYYTDMWSVGVLSYILLSGLSPFGGENDDET-LRNVKSCDWNMDDSAFSGISEDGKDF 390
Query: 254 VTACLVKDPKKRPTAEKLMKHHFF 277
+ L+ DP R T + ++H +
Sbjct: 391 IRKLLLADPNTRMTIHQALEHPWL 414
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 112/230 (48%), Gaps = 20/230 (8%)
Query: 57 DGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVI 116
+ I REV ++ HPNV+ H + + +++ +AGG + A E E
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEA 116
Query: 117 ATLLRETLKALVYLHFHGHIHRDVKAGNI-LIDSNGA---IKLADFGVSACMFDAGDRQR 172
L++ L + YLH H D+K NI L+D N IK+ DFG+ A D G+
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL-AHKIDFGNE-- 173
Query: 173 SRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ 232
+N F GTP ++APE++ +AD+WS G+ L G +PF + TL
Sbjct: 174 FKNIF-GTPEFVAPEIVN-YEPLGLEADMWSIGVITYILLSGASPFLGDTKQE----TLA 227
Query: 233 NAPPGLDYE-RDKRFSKS---FKELVTACLVKDPKKRPTAEKLMKHHFFK 278
N ++YE D+ FS + K+ + LVKDPKKR T + ++H + K
Sbjct: 228 NVS-AVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 112/230 (48%), Gaps = 20/230 (8%)
Query: 57 DGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVI 116
+ I REV ++ HPNV+ H + + +++ +AGG + A E E
Sbjct: 58 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEA 115
Query: 117 ATLLRETLKALVYLHFHGHIHRDVKAGNI-LIDSNGA---IKLADFGVSACMFDAGDRQR 172
L++ L + YLH H D+K NI L+D N IK+ DFG+ A D G+
Sbjct: 116 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL-AHKIDFGNE-- 172
Query: 173 SRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ 232
+N F GTP ++APE++ +AD+WS G+ L G +PF + TL
Sbjct: 173 FKNIF-GTPEFVAPEIVN-YEPLGLEADMWSIGVITYILLSGASPFLGDTKQE----TLA 226
Query: 233 NAPPGLDYE-RDKRFSKS---FKELVTACLVKDPKKRPTAEKLMKHHFFK 278
N ++YE D+ FS + K+ + LVKDPKKR T + ++H + K
Sbjct: 227 NVS-AVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 275
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 112/230 (48%), Gaps = 20/230 (8%)
Query: 57 DGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVI 116
+ I REV ++ HPNV+ H + + +++ +AGG + A E E
Sbjct: 58 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEA 115
Query: 117 ATLLRETLKALVYLHFHGHIHRDVKAGNI-LIDSNGA---IKLADFGVSACMFDAGDRQR 172
L++ L + YLH H D+K NI L+D N IK+ DFG+ A D G+
Sbjct: 116 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL-AHKIDFGNE-- 172
Query: 173 SRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ 232
+N F GTP ++APE++ +AD+WS G+ L G +PF + TL
Sbjct: 173 FKNIF-GTPEFVAPEIVN-YEPLGLEADMWSIGVITYILLSGASPFLGDTKQE----TLA 226
Query: 233 NAPPGLDYE-RDKRFSKS---FKELVTACLVKDPKKRPTAEKLMKHHFFK 278
N ++YE D+ FS + K+ + LVKDPKKR T + ++H + K
Sbjct: 227 NVS-AVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 275
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 116/258 (44%), Gaps = 16/258 (6%)
Query: 17 RLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLR 76
RL ++G+G V+ N + + L+ + +E Q M+ H +++
Sbjct: 21 RLEVKLGQGCFGEVWMGT---WNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ 77
Query: 77 AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHI 136
+ + + +++V+ YM+ GS L +K + P + + + + Y+ ++
Sbjct: 78 LY-AVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 136
Query: 137 HRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPC-WMAPEVMQQLHG- 194
HRD++A NIL+ N K+ADFG++ + D R F P W APE L+G
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF---PIKWTAPEA--ALYGR 191
Query: 195 YDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKEL 253
+ K+D+WSFGI EL G P+ P V L G +S +L
Sbjct: 192 FTIKSDVWSFGILLTELTTKGRVPY----PGMVNREVLDQVERGYRMPCPPECPESLHDL 247
Query: 254 VTACLVKDPKKRPTAEKL 271
+ C KDP++RPT E L
Sbjct: 248 MCQCWRKDPEERPTFEYL 265
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 112/230 (48%), Gaps = 20/230 (8%)
Query: 57 DGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVI 116
+ I REV ++ HPNV+ H + + +++ +AGG + A E E
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEA 116
Query: 117 ATLLRETLKALVYLHFHGHIHRDVKAGNI-LIDSNGA---IKLADFGVSACMFDAGDRQR 172
L++ L + YLH H D+K NI L+D N IK+ DFG+ A D G+
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL-AHKIDFGNE-- 173
Query: 173 SRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ 232
+N F GTP ++APE++ +AD+WS G+ L G +PF + TL
Sbjct: 174 FKNIF-GTPEFVAPEIVN-YEPLGLEADMWSIGVITYILLSGASPFLGDTKQE----TLA 227
Query: 233 NAPPGLDYE-RDKRFSKS---FKELVTACLVKDPKKRPTAEKLMKHHFFK 278
N ++YE D+ FS + K+ + LVKDPKKR T + ++H + K
Sbjct: 228 NVS-AVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 124/275 (45%), Gaps = 23/275 (8%)
Query: 12 DAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNH 71
D+ Y L +++G G NE+VA+K + E+ + ++RE+ R H
Sbjct: 16 DSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYI--ERGEKIDENVKREIINHRSLRH 73
Query: 72 PNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLH 131
PN++R T L +VM Y +GG + +A F E ++ + + Y H
Sbjct: 74 PNIVRFKEVILTPTHLAIVMEYASGGELFERICNA--GRFSEDEARFFFQQLISGVSYCH 131
Query: 132 FHGHIHRDVKAGNILIDSNGA--IKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVM 189
HRD+K N L+D + A +K+ DFG S + + VGTP ++APEV+
Sbjct: 132 AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSK----SSVLHSQPKSTVGTPAYIAPEVL 187
Query: 190 QQLHGYDFK-ADIWSFGITALELAHGHAPFSKYPPMKVL------LMTLQNAPPGLDYER 242
+ YD K AD+WS G+T + G PF K ++ +Q A P DY
Sbjct: 188 LK-KEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIP--DY-- 242
Query: 243 DKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFF 277
S + L++ V DP KR + ++ H +F
Sbjct: 243 -VHISPECRHLISRIFVADPAKRISIPEIRNHEWF 276
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 112/230 (48%), Gaps = 20/230 (8%)
Query: 57 DGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVI 116
+ I REV ++ HPNV+ H + + +++ +AGG + A E E
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEA 116
Query: 117 ATLLRETLKALVYLHFHGHIHRDVKAGNI-LIDSNGA---IKLADFGVSACMFDAGDRQR 172
L++ L + YLH H D+K NI L+D N IK+ DFG+ A D G+
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL-AHKIDFGNE-- 173
Query: 173 SRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ 232
+N F GTP ++APE++ +AD+WS G+ L G +PF + TL
Sbjct: 174 FKNIF-GTPEFVAPEIVN-YEPLGLEADMWSIGVITYILLSGASPFLGDTKQE----TLA 227
Query: 233 NAPPGLDYE-RDKRFSKS---FKELVTACLVKDPKKRPTAEKLMKHHFFK 278
N ++YE D+ FS + K+ + LVKDPKKR T + ++H + K
Sbjct: 228 NVS-AVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 112/230 (48%), Gaps = 20/230 (8%)
Query: 57 DGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVI 116
+ I REV ++ HPNV+ H + + +++ +AGG + A E E
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEA 116
Query: 117 ATLLRETLKALVYLHFHGHIHRDVKAGNI-LIDSNGA---IKLADFGVSACMFDAGDRQR 172
L++ L + YLH H D+K NI L+D N IK+ DFG+ A D G+
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL-AHKIDFGNE-- 173
Query: 173 SRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ 232
+N F GTP ++APE++ +AD+WS G+ L G +PF + TL
Sbjct: 174 FKNIF-GTPEFVAPEIVN-YEPLGLEADMWSIGVITYILLSGASPFLGDTKQE----TLA 227
Query: 233 NAPPGLDYE-RDKRFSKS---FKELVTACLVKDPKKRPTAEKLMKHHFFK 278
N ++YE D+ FS + K+ + LVKDPKKR T + ++H + K
Sbjct: 228 NVS-AVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 132/291 (45%), Gaps = 36/291 (12%)
Query: 16 YRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR-REVQTMRVTNHPNV 74
Y+ E+VGEG VY+A IVA+K + L+ + + RE+ ++ +HPN+
Sbjct: 23 YQKLEKVGEGTYGVVYKAKD-SQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNI 81
Query: 75 LRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHG 134
+ + CL +V +M L + G ++ I L + L+ + + H H
Sbjct: 82 VSLIDVIHSERCLTLVFEFMEKD--LKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR 139
Query: 135 HIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLHG 194
+HRD+K N+LI+S+GA+KLADFG++ G RS V T + AP+V+
Sbjct: 140 ILHRDLKPQNLLINSDGALKLADFGLARAF---GIPVRSYTHEVVTLWYRAPDVLMGSKK 196
Query: 195 YDFKADIWSFGITALELAHGHAPF------SKYPPMKVLLMT--------LQNAPPGLDY 240
Y DIWS G E+ G F + P + +L T +Q P L
Sbjct: 197 YSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELP--LWK 254
Query: 241 ER-----DKR--------FSKSFKELVTACLVKDPKKRPTAEKLMKHHFFK 278
+R +K+ F + +L++ L DP KR +A M H +FK
Sbjct: 255 QRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFK 305
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 115/258 (44%), Gaps = 16/258 (6%)
Query: 17 RLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLR 76
RL ++G+G V+ N + + L+ + +E Q M+ H +++
Sbjct: 21 RLEVKLGQGCFGEVWMGT---WNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ 77
Query: 77 AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHI 136
+ + + +++VM YM+ G L +K + P + + + + Y+ ++
Sbjct: 78 LY-AVVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 136
Query: 137 HRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPC-WMAPEVMQQLHG- 194
HRD++A NIL+ N K+ADFG++ + D R F P W APE L+G
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF---PIKWTAPEA--ALYGR 191
Query: 195 YDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKEL 253
+ K+D+WSFGI EL G P+ P V L G +S +L
Sbjct: 192 FTIKSDVWSFGILLTELTTKGRVPY----PGMVNREVLDQVERGYRMPCPPECPESLHDL 247
Query: 254 VTACLVKDPKKRPTAEKL 271
+ C KDP++RPT E L
Sbjct: 248 MCQCWRKDPEERPTFEYL 265
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 115/258 (44%), Gaps = 16/258 (6%)
Query: 17 RLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLR 76
RL ++G+G V+ N + + L+ + +E Q M+ H +++
Sbjct: 270 RLEVKLGQGCFGEVWMGT---WNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ 326
Query: 77 AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHI 136
+ + + +++V YM+ GS L +K + P + + + + Y+ ++
Sbjct: 327 LY-AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYV 385
Query: 137 HRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPC-WMAPEVMQQLHG- 194
HRD++A NIL+ N K+ADFG++ + D R F P W APE L+G
Sbjct: 386 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF---PIKWTAPEAA--LYGR 440
Query: 195 YDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKEL 253
+ K+D+WSFGI EL G P+ P V L G +S +L
Sbjct: 441 FTIKSDVWSFGILLTELTTKGRVPY----PGMVNREVLDQVERGYRMPCPPECPESLHDL 496
Query: 254 VTACLVKDPKKRPTAEKL 271
+ C K+P++RPT E L
Sbjct: 497 MCQCWRKEPEERPTFEYL 514
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 133/294 (45%), Gaps = 42/294 (14%)
Query: 16 YRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR-REVQTMRVTNHPNV 74
Y+ E+VGEG VY+A IVA+K + L+ + + RE+ ++ +HPN+
Sbjct: 23 YQKLEKVGEGTYGVVYKAKD-SQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNI 81
Query: 75 LRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPE---GFEEPVIATLLRETLKALVYLH 131
+ + CL +V +M +K E G ++ I L + L+ + + H
Sbjct: 82 VSLIDVIHSERCLTLVFEFMEKD-----LKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH 136
Query: 132 FHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQ 191
H +HRD+K N+LI+S+GA+KLADFG++ G RS V T + AP+V+
Sbjct: 137 QHRILHRDLKPQNLLINSDGALKLADFGLARAF---GIPVRSYTHEVVTLWYRAPDVLMG 193
Query: 192 LHGYDFKADIWSFGITALELAHGHAPF------SKYPPMKVLLMT--------LQNAPPG 237
Y DIWS G E+ G F + P + +L T +Q P
Sbjct: 194 SKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELP-- 251
Query: 238 LDYER-----DKR--------FSKSFKELVTACLVKDPKKRPTAEKLMKHHFFK 278
L +R +K+ F + +L++ L DP KR +A M H +FK
Sbjct: 252 LWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFK 305
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 123/275 (44%), Gaps = 23/275 (8%)
Query: 12 DAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNH 71
D+ Y L +++G G NE+VA+K + E+ ++RE+ R H
Sbjct: 17 DSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYI--ERGEKIAANVKREIINHRSLRH 74
Query: 72 PNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLH 131
PN++R T L +VM Y +GG + +A F E ++ + + Y H
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFERICNA--GRFSEDEARFFFQQLISGVSYCH 132
Query: 132 FHGHIHRDVKAGNILIDSNGA--IKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVM 189
HRD+K N L+D + A +K+ DFG S + + VGTP ++APEV+
Sbjct: 133 AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSK----SSVLHSQPKSTVGTPAYIAPEVL 188
Query: 190 QQLHGYDFK-ADIWSFGITALELAHGHAPFSKYPPMKVL------LMTLQNAPPGLDYER 242
+ YD K AD+WS G+T + G PF K ++ +Q A P DY
Sbjct: 189 LK-KEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIP--DY-- 243
Query: 243 DKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFF 277
S + L++ V DP KR + ++ H +F
Sbjct: 244 -VHISPECRHLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 128/298 (42%), Gaps = 28/298 (9%)
Query: 11 VDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEK--CNNDLDGIRREVQTMRV 68
V D+ + +G+G V A+K+L E +++ E + ++
Sbjct: 7 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 66
Query: 69 TNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL-HIMKSAYPEGFEEPVIATLLRETLKAL 127
T HP + +F T L VM Y GG H+ + F E E + AL
Sbjct: 67 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV---FTEERARFYGAEIVSAL 123
Query: 128 VYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPE 187
YLH ++RD+K N+++D +G IK+ DFG+ G + F GTP ++APE
Sbjct: 124 EYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG---ATMKXFCGTPEYLAPE 180
Query: 188 VMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFS 247
V++ + Y D W G+ E+ G PF ++ + L + RF
Sbjct: 181 VLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME---------EIRFP 230
Query: 248 KSF----KELVTACLVKDPKKR----PT-AEKLMKHHFFKHARSNDFLARSIVDNLAP 296
++ K L+ L KDPK+R P+ A+++M+H FF D + + ++ P
Sbjct: 231 RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKP 288
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 93/188 (49%), Gaps = 15/188 (7%)
Query: 43 AIKVLDLEKCNN--DLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL 100
A+K+LD +K ++ E + ++ N P +++ SF L++VM YM GG
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMF 129
Query: 101 -HIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFG 159
H+ + F EP + + YLH I+RD+K N+LID G IK+ADFG
Sbjct: 130 SHLRRIG---RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFG 186
Query: 160 VSACMFDAGDRQRSRN-TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
+ R + R GTP ++APE++ GY+ D W+ G+ E+A G+ PF
Sbjct: 187 FAK-------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 219 SKYPPMKV 226
P+++
Sbjct: 239 FADQPIQI 246
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 115/258 (44%), Gaps = 16/258 (6%)
Query: 17 RLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLR 76
RL ++G+G V+ N + + L+ + +E Q M+ H +++
Sbjct: 21 RLEVKLGQGCFGEVWMGT---WNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQ 77
Query: 77 AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHI 136
+ + + +++V YM+ GS L +K + P + + + + Y+ ++
Sbjct: 78 LY-AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 136
Query: 137 HRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPC-WMAPEVMQQLHG- 194
HRD++A NIL+ N K+ADFG++ + D R F P W APE L+G
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF---PIKWTAPEA--ALYGR 191
Query: 195 YDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKEL 253
+ K+D+WSFGI EL G P+ P V L G +S +L
Sbjct: 192 FTIKSDVWSFGILLTELTTKGRVPY----PGMVNREVLDQVERGYRMPCPPECPESLHDL 247
Query: 254 VTACLVKDPKKRPTAEKL 271
+ C KDP++RPT E L
Sbjct: 248 MCQCWRKDPEERPTFEYL 265
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 93/188 (49%), Gaps = 15/188 (7%)
Query: 43 AIKVLDLEKCNN--DLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL 100
A+K+LD +K ++ E + ++ N P +++ SF L++VM YM GG
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMF 129
Query: 101 -HIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFG 159
H+ + F EP + + YLH I+RD+K N+LID G IK+ADFG
Sbjct: 130 SHLRRIG---RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFG 186
Query: 160 VSACMFDAGDRQRSRN-TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
+ R + R GTP ++APE++ GY+ D W+ G+ E+A G+ PF
Sbjct: 187 FAK-------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 219 SKYPPMKV 226
P+++
Sbjct: 239 FADQPIQI 246
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 115/258 (44%), Gaps = 16/258 (6%)
Query: 17 RLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLR 76
RL ++G+G V+ N + + L+ + +E Q M+ H +++
Sbjct: 12 RLEVKLGQGCFGEVWMGT---WNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ 68
Query: 77 AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHI 136
+ + + +++V YM+ GS L +K + P + + + + Y+ ++
Sbjct: 69 LY-AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 127
Query: 137 HRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPC-WMAPEVMQQLHG- 194
HRD++A NIL+ N K+ADFG++ + D R F P W APE L+G
Sbjct: 128 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF---PIKWTAPEA--ALYGR 182
Query: 195 YDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKEL 253
+ K+D+WSFGI EL G P+ P V L G +S +L
Sbjct: 183 FTIKSDVWSFGILLTELTTKGRVPY----PGMVNREVLDQVERGYRMPCPPECPESLHDL 238
Query: 254 VTACLVKDPKKRPTAEKL 271
+ C KDP++RPT E L
Sbjct: 239 MCQCWRKDPEERPTFEYL 256
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 123/270 (45%), Gaps = 21/270 (7%)
Query: 20 EEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDG-IRREVQTMRVTNH-PNVLRA 77
+E+G G A V + + + A K L + D I E+ + + P V+
Sbjct: 35 KELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINL 94
Query: 78 HCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIH 137
H + + +++ Y AGG + E E + L+++ L+ + YLH + +H
Sbjct: 95 HEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVH 154
Query: 138 RDVKAGNILIDSN---GAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLHG 194
D+K NIL+ S G IK+ DFG+S + A + + +GTP ++APE++
Sbjct: 155 LDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELRE----IMGTPEYLAPEIL----N 206
Query: 195 YD---FKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERD--KRFSKS 249
YD D+W+ GI A L +PF + L Q +DY + S+
Sbjct: 207 YDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQ---VNVDYSEETFSSVSQL 263
Query: 250 FKELVTACLVKDPKKRPTAEKLMKHHFFKH 279
+ + + LVK+P+KRPTAE + H + +
Sbjct: 264 ATDFIQSLLVKNPEKRPTAEICLSHSWLQQ 293
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 115/258 (44%), Gaps = 16/258 (6%)
Query: 17 RLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLR 76
RL ++G+G V+ N + + L+ + +E Q M+ H +++
Sbjct: 21 RLEVKLGQGCFGEVWMGT---WNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ 77
Query: 77 AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHI 136
+ + + +++V YM+ GS L +K + P + + + + Y+ ++
Sbjct: 78 LY-AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 136
Query: 137 HRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPC-WMAPEVMQQLHG- 194
HRD++A NIL+ N K+ADFG++ + D R F P W APE L+G
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF---PIKWTAPEA--ALYGR 191
Query: 195 YDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKEL 253
+ K+D+WSFGI EL G P+ P V L G +S +L
Sbjct: 192 FTIKSDVWSFGILLTELTTKGRVPY----PGMVNREVLDQVERGYRMPCPPECPESLHDL 247
Query: 254 VTACLVKDPKKRPTAEKL 271
+ C KDP++RPT E L
Sbjct: 248 MCQCWRKDPEERPTFEYL 265
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 122/276 (44%), Gaps = 18/276 (6%)
Query: 9 FPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNN-DLDGIRREVQTMR 67
P A+DY + +G G + +I+ K LD + + EV +R
Sbjct: 1 MPSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLR 60
Query: 68 VTNHPNVLRAHCSFT--TGHCLWVVMPYMAGGSCLHIMKSAYPEG--FEEPVIATLLRET 123
HPN++R + T L++VM Y GG ++ E +E + ++ +
Sbjct: 61 ELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQL 120
Query: 124 LKALVYLHF-----HGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFV 178
AL H H +HRD+K N+ +D +KL DFG++ + ++ FV
Sbjct: 121 TLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKA---FV 177
Query: 179 GTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGL 238
GTP +M+PE M ++ Y+ K+DIWS G EL PF+ + ++ + +
Sbjct: 178 GTPYYMSPEQMNRM-SYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRI 236
Query: 239 DYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKH 274
Y R+S E++T L RP+ E+++++
Sbjct: 237 PY----RYSDELNEIITRMLNLKDYHRPSVEEILEN 268
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 128/298 (42%), Gaps = 28/298 (9%)
Query: 11 VDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEK--CNNDLDGIRREVQTMRV 68
V D+ + +G+G V A+K+L E +++ E + ++
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 69 TNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL-HIMKSAYPEGFEEPVIATLLRETLKAL 127
T HP + +F T L VM Y GG H+ + F E E + AL
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV---FTEERARFYGAEIVSAL 118
Query: 128 VYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPE 187
YLH ++RD+K N+++D +G IK+ DFG+ G + F GTP ++APE
Sbjct: 119 EYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG---ATMKXFCGTPEYLAPE 175
Query: 188 VMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFS 247
V++ + Y D W G+ E+ G PF ++ + L + RF
Sbjct: 176 VLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME---------EIRFP 225
Query: 248 KSF----KELVTACLVKDPKKR----PT-AEKLMKHHFFKHARSNDFLARSIVDNLAP 296
++ K L+ L KDPK+R P+ A+++M+H FF D + + ++ P
Sbjct: 226 RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKP 283
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 108/245 (44%), Gaps = 26/245 (10%)
Query: 62 EVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL-HIMKSAYPEGFEEPVIATLL 120
E + ++ T HP + +F T L VM Y GG H+ + F E
Sbjct: 55 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV---FTEERARFYG 111
Query: 121 RETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGT 180
E + AL YLH ++RD+K N+++D +G IK+ DFG+ G + F GT
Sbjct: 112 AEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG---ATMKXFCGT 168
Query: 181 PCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDY 240
P ++APEV++ + Y D W G+ E+ G PF ++ + L
Sbjct: 169 PEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME------- 220
Query: 241 ERDKRFSKSF----KELVTACLVKDPKKR-----PTAEKLMKHHFFKHARSNDFLARSIV 291
+ RF ++ K L+ L KDPK+R A+++M+H FF D + + ++
Sbjct: 221 --EIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLL 278
Query: 292 DNLAP 296
P
Sbjct: 279 PPFKP 283
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 114/257 (44%), Gaps = 14/257 (5%)
Query: 17 RLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLR 76
RL ++G+G V+ N + + L+ + +E Q M+ H +++
Sbjct: 21 RLEVKLGQGCFGEVWMGT---WNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ 77
Query: 77 AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHI 136
+ + + +++V YM+ GS L +K + P + + + + Y+ ++
Sbjct: 78 LY-AVVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 136
Query: 137 HRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLHG-Y 195
HRD++A NIL+ N K+ADFG++ + D R F W APE L+G +
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK--WTAPEA--ALYGRF 192
Query: 196 DFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKELV 254
K+D+WSFGI EL G P+ P V L G +S +L+
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVPY----PGMVNREVLDQVERGYRMPCPPECPESLHDLM 248
Query: 255 TACLVKDPKKRPTAEKL 271
C KDP++RPT E L
Sbjct: 249 CQCWRKDPEERPTFEYL 265
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 115/258 (44%), Gaps = 16/258 (6%)
Query: 17 RLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLR 76
RL ++G+G V+ N + + L+ + +E Q M+ H +++
Sbjct: 10 RLEVKLGQGCFGEVWMGT---WNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ 66
Query: 77 AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHI 136
+ + + +++V YM+ GS L +K + P + + + + Y+ ++
Sbjct: 67 LY-AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 125
Query: 137 HRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPC-WMAPEVMQQLHG- 194
HRD++A NIL+ N K+ADFG++ + D R F P W APE L+G
Sbjct: 126 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF---PIKWTAPEA--ALYGR 180
Query: 195 YDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKEL 253
+ K+D+WSFGI EL G P+ P V L G +S +L
Sbjct: 181 FTIKSDVWSFGILLTELTTKGRVPY----PGMVNREVLDQVERGYRMPCPPECPESLHDL 236
Query: 254 VTACLVKDPKKRPTAEKL 271
+ C KDP++RPT E L
Sbjct: 237 MCQCWRKDPEERPTFEYL 254
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 128/298 (42%), Gaps = 28/298 (9%)
Query: 11 VDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEK--CNNDLDGIRREVQTMRV 68
V D+ + +G+G V A+K+L E +++ E + ++
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 69 TNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL-HIMKSAYPEGFEEPVIATLLRETLKAL 127
T HP + +F T L VM Y GG H+ + F E E + AL
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV---FTEERARFYGAEIVSAL 118
Query: 128 VYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPE 187
YLH ++RD+K N+++D +G IK+ DFG+ G + F GTP ++APE
Sbjct: 119 EYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG---ATMKXFCGTPEYLAPE 175
Query: 188 VMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFS 247
V++ + Y D W G+ E+ G PF ++ + L + RF
Sbjct: 176 VLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME---------EIRFP 225
Query: 248 KSF----KELVTACLVKDPKKR----PT-AEKLMKHHFFKHARSNDFLARSIVDNLAP 296
++ K L+ L KDPK+R P+ A+++M+H FF D + + ++ P
Sbjct: 226 RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKP 283
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 116/258 (44%), Gaps = 16/258 (6%)
Query: 17 RLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLR 76
RL ++G+G V+ N + + L+ + +E Q M+ H +++
Sbjct: 187 RLEVKLGQGCFGEVWMGT---WNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ 243
Query: 77 AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHI 136
+ + + +++V YM+ GS L +K + P + + + + Y+ ++
Sbjct: 244 LY-AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYV 302
Query: 137 HRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPC-WMAPEVMQQLHG- 194
HRD++A NIL+ N K+ADFG++ + D R F P W APE L+G
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF---PIKWTAPEAA--LYGR 357
Query: 195 YDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKEL 253
+ K+D+WSFGI EL G P YP M V L G +S +L
Sbjct: 358 FTIKSDVWSFGILLTELTTKGRVP---YPGM-VNREVLDQVERGYRMPCPPECPESLHDL 413
Query: 254 VTACLVKDPKKRPTAEKL 271
+ C K+P++RPT E L
Sbjct: 414 MCQCWRKEPEERPTFEYL 431
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 116/258 (44%), Gaps = 16/258 (6%)
Query: 17 RLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLR 76
RL ++G+G V+ N + + L+ + +E Q M+ H +++
Sbjct: 187 RLEVKLGQGCFGEVWMGT---WNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ 243
Query: 77 AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHI 136
+ + + +++V YM+ GS L +K + P + + + + Y+ ++
Sbjct: 244 LY-AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYV 302
Query: 137 HRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPC-WMAPEVMQQLHG- 194
HRD++A NIL+ N K+ADFG++ + D R F P W APE L+G
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF---PIKWTAPEAA--LYGR 357
Query: 195 YDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKEL 253
+ K+D+WSFGI EL G P YP M V L G +S +L
Sbjct: 358 FTIKSDVWSFGILLTELTTKGRVP---YPGM-VNREVLDQVERGYRMPCPPECPESLHDL 413
Query: 254 VTACLVKDPKKRPTAEKL 271
+ C K+P++RPT E L
Sbjct: 414 MCQCWRKEPEERPTFEYL 431
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 120/268 (44%), Gaps = 26/268 (9%)
Query: 43 AIKVLDLEKCNN--DLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL 100
A+K+LD +K ++ E + ++ N P +++ SF L++VM Y+AGG
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 101 -HIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFG 159
H+ + F EP + + YLH I+RD+K N+LID G I++ DFG
Sbjct: 130 SHLRRIG---RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 160 VSACMFDAGDRQRSRN-TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
+ R + R GTP ++APE++ GY+ D W+ G+ E+A G+ PF
Sbjct: 187 FAK-------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 219 SKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKR----PTAEKLMKH 274
P+++ + FS K+L+ L D KR P +K+
Sbjct: 239 FADQPIQIYEKIVSGK-----VRFPSHFSSDLKDLLRNLLQVDLTKRFGNLPNGVNDIKN 293
Query: 275 HFFKHARSNDFLARSIVDNLAPLGERFR 302
H K + D++A AP +F+
Sbjct: 294 H--KWFATTDWIAIYQRKVEAPFIPKFK 319
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 100/225 (44%), Gaps = 21/225 (9%)
Query: 61 REVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSA---YPEGFEEPVIA 117
+EV+ MR HPNVL+ L + Y+ GG+ I+KS YP
Sbjct: 56 KEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQR----V 111
Query: 118 TLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDR------- 170
+ ++ + YLH IHRD+ + N L+ N + +ADFG++ M D +
Sbjct: 112 SFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSL 171
Query: 171 ----QRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKV 226
++ R T VG P WMAPE++ YD K D++SFGI E+ Y P +
Sbjct: 172 KKPDRKKRYTVVGNPYWMAPEMING-RSYDEKVDVFSFGIVLCEIIGRVNADPDYLP-RT 229
Query: 227 LLMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKL 271
+ L N LD SF + C DP+KRP+ KL
Sbjct: 230 MDFGL-NVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKL 273
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 114/258 (44%), Gaps = 16/258 (6%)
Query: 17 RLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLR 76
RL ++G+G V+ N + + L+ + +E Q M+ H +++
Sbjct: 21 RLEVKLGQGCFGEVWMGT---WNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ 77
Query: 77 AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHI 136
+ + + +++V YM+ GS L +K + P + + + + Y+ ++
Sbjct: 78 LY-AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 136
Query: 137 HRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPC-WMAPEVMQQLHG- 194
HRD+ A NIL+ N K+ADFG++ + D R F P W APE L+G
Sbjct: 137 HRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF---PIKWTAPEA--ALYGR 191
Query: 195 YDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKEL 253
+ K+D+WSFGI EL G P+ P V L G +S +L
Sbjct: 192 FTIKSDVWSFGILLTELTTKGRVPY----PGMVNREVLDQVERGYRMPCPPECPESLHDL 247
Query: 254 VTACLVKDPKKRPTAEKL 271
+ C KDP++RPT E L
Sbjct: 248 MCQCWRKDPEERPTFEYL 265
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 111/230 (48%), Gaps = 20/230 (8%)
Query: 57 DGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVI 116
+ I REV ++ HPNV+ H + + ++ +AGG + A E E
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFL--AEKESLTEEEA 116
Query: 117 ATLLRETLKALVYLHFHGHIHRDVKAGNI-LIDSNGA---IKLADFGVSACMFDAGDRQR 172
L++ L + YLH H D+K NI L+D N IK+ DFG+ A D G+
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL-AHKIDFGNE-- 173
Query: 173 SRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ 232
+N F GTP ++APE++ +AD+WS G+ L G +PF + TL
Sbjct: 174 FKNIF-GTPEFVAPEIVN-YEPLGLEADMWSIGVITYILLSGASPFLGDTKQE----TLA 227
Query: 233 NAPPGLDYE-RDKRFSKS---FKELVTACLVKDPKKRPTAEKLMKHHFFK 278
N ++YE D+ FS + K+ + LVKDPKKR T + ++H + K
Sbjct: 228 NVS-AVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 125/285 (43%), Gaps = 50/285 (17%)
Query: 13 AKDYRLYEE-------VGEGVSATVYRALCI-PLNEIVAIKVLDLEKCNND--LDGIRRE 62
+DY + E +GEG V++ + + P N +A+ + + C +D + +E
Sbjct: 382 TRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQE 441
Query: 63 VQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGG---SCLHIMKSAYPEGFEEPVIATL 119
TMR +HP++++ T + +W++M G S L + K + +A+L
Sbjct: 442 ALTMRQFDHPHIVKL-IGVITENPVWIIMELCTLGELRSFLQVRKFSLD-------LASL 493
Query: 120 LRETLK---ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNT 176
+ + AL YL +HRD+ A N+L+ SN +KL DFG+S M D+ + S+
Sbjct: 494 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 553
Query: 177 FVGTPC-WMAPEVMQQLHGYDFKADIWSFGITALE-LAHGHAPFSKYPPMKVL------- 227
P WMAPE + + +D+W FG+ E L HG PF V+
Sbjct: 554 L---PIKWMAPESI-NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE 609
Query: 228 -LMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKL 271
L N PP L L+T C DP +RP +L
Sbjct: 610 RLPMPPNCPPTL------------YSLMTKCWAYDPSRRPRFTEL 642
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 116/258 (44%), Gaps = 16/258 (6%)
Query: 17 RLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLR 76
RL ++G+G V+ N + + L+ + +E Q M+ H +++
Sbjct: 187 RLEVKLGQGCFGEVWMGT---WNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ 243
Query: 77 AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHI 136
+ + + +++V YM+ GS L +K + P + + + + Y+ ++
Sbjct: 244 LY-AVVSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYV 302
Query: 137 HRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPC-WMAPEVMQQLHG- 194
HRD++A NIL+ N K+ADFG++ + D R F P W APE L+G
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF---PIKWTAPEAA--LYGR 357
Query: 195 YDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKEL 253
+ K+D+WSFGI EL G P YP M V L G +S +L
Sbjct: 358 FTIKSDVWSFGILLTELTTKGRVP---YPGM-VNREVLDQVERGYRMPCPPECPESLHDL 413
Query: 254 VTACLVKDPKKRPTAEKL 271
+ C K+P++RPT E L
Sbjct: 414 MCQCWRKEPEERPTFEYL 431
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 93/188 (49%), Gaps = 15/188 (7%)
Query: 43 AIKVLDLEKCNN--DLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL 100
A+K+LD +K ++ E + ++ N P +++ SF L++VM Y+ GG
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMF 129
Query: 101 -HIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFG 159
H+ + F EP + + YLH I+RD+K N+LID G IK+ADFG
Sbjct: 130 SHLRRIG---RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFG 186
Query: 160 VSACMFDAGDRQRSRN-TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
+ R + R GTP ++APE++ GY+ D W+ G+ E+A G+ PF
Sbjct: 187 FAK-------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 219 SKYPPMKV 226
P+++
Sbjct: 239 FADQPIQI 246
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 93/188 (49%), Gaps = 15/188 (7%)
Query: 43 AIKVLDLEKCNN--DLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL 100
A+K+LD +K ++ E + ++ N P +++ SF L++VM Y+AGG
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 101 -HIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFG 159
H+ + F EP + + YLH I+RD+K N+LID G I++ DFG
Sbjct: 130 SHLRRIG---RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 160 VSACMFDAGDRQRSRN-TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
+ R + R GTP ++APE++ GY+ D W+ G+ E+A G+ PF
Sbjct: 187 FAK-------RVKGRTWXLAGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 219 SKYPPMKV 226
P+++
Sbjct: 239 FADQPIQI 246
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 123/263 (46%), Gaps = 14/263 (5%)
Query: 8 RFPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMR 67
++ ++ D + ++G G VY + + VA+K L ++ +++ +E M+
Sbjct: 5 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMK 62
Query: 68 VTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKAL 127
HPN+++ T ++++ +M G+ L ++ + V+ + + A+
Sbjct: 63 EIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAM 122
Query: 128 VYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPE 187
YL IHRD+ A N L+ N +K+ADFG+S M GD + W APE
Sbjct: 123 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM--TGDTXTAHAGAKFPIKWTAPE 180
Query: 188 VMQQLHGYDFKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLDY--ERDK 244
+ + + K+D+W+FG+ E+A +G +P+ P +V + + DY ER +
Sbjct: 181 SL-AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEK------DYRMERPE 233
Query: 245 RFSKSFKELVTACLVKDPKKRPT 267
+ EL+ AC +P RP+
Sbjct: 234 GCPEKVYELMRACWQWNPSDRPS 256
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 133/295 (45%), Gaps = 16/295 (5%)
Query: 8 RFPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMR 67
++ ++ D + ++G G VY + + VA+K L ++ +++ +E M+
Sbjct: 5 KWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMK 62
Query: 68 VTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKAL 127
HPN+++ T +++ +M G+ L ++ + V+ + + A+
Sbjct: 63 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAM 122
Query: 128 VYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPE 187
YL IHRD+ A N L+ N +K+ADFG+S M GD + W APE
Sbjct: 123 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM--TGDTXTAHAGAKFPIKWTAPE 180
Query: 188 VMQQLHGYDFKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLDY--ERDK 244
+ + + K+D+W+FG+ E+A +G +P+ P +V + + DY ER +
Sbjct: 181 SL-AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEK------DYRMERPE 233
Query: 245 RFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFKHARSNDFLARSIVDNLAPLGE 299
+ EL+ AC +P RP+ ++ H F+ ++ + L GE
Sbjct: 234 GCPEKVYELMRACWQWNPSDRPSFAEI--HQAFETMFQESSISDEVEKELGKRGE 286
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 93/188 (49%), Gaps = 15/188 (7%)
Query: 43 AIKVLDLEKCNN--DLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL 100
A+K+LD +K ++ E + ++ N P +++ SF L++VM Y+AGG
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 101 -HIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFG 159
H+ + F EP + + YLH I+RD+K N+LID G I++ DFG
Sbjct: 130 SHLRRIG---RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 160 VSACMFDAGDRQRSRN-TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
+ R + R GTP ++APE++ GY+ D W+ G+ E+A G+ PF
Sbjct: 187 FAK-------RVKGRTWXLXGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 219 SKYPPMKV 226
P+++
Sbjct: 239 FADQPIQI 246
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 124/271 (45%), Gaps = 20/271 (7%)
Query: 6 EKRFPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQT 65
E + V + +L E +G G + V+ N + V L++ + D E
Sbjct: 5 EDAWEVPRETLKLVERLGAGQAGEVWMGY---YNGHTKVAVKSLKQGSMSPDAFLAEANL 61
Query: 66 MRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPV--IATLLRET 123
M+ H ++R + + T ++++ YM GS + +K+ P G + + + + +
Sbjct: 62 MKQLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQI 118
Query: 124 LKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPC- 182
+ + ++ +IHRD++A NIL+ + K+ADFG++ + DA R F P
Sbjct: 119 AEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKF---PIK 175
Query: 183 WMAPEVMQQLHG-YDFKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLDY 240
W APE + +G + K+D+WSFGI E+ HG P+ +V +QN G
Sbjct: 176 WTAPEAIN--YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV----IQNLERGYRM 229
Query: 241 ERDKRFSKSFKELVTACLVKDPKKRPTAEKL 271
R + +L+ C + P+ RPT + L
Sbjct: 230 VRPDNCPEELYQLMRLCWKERPEDRPTFDYL 260
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 94/187 (50%), Gaps = 13/187 (6%)
Query: 43 AIKVLDLEKCNN--DLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL 100
A+K+LD +K ++ E + ++ N P +++ SF L++VM Y+AGG
Sbjct: 91 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 150
Query: 101 -HIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFG 159
H+ + F EP + + YLH I+RD+K N+LID G I++ DFG
Sbjct: 151 SHLRRIG---RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 207
Query: 160 VSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFS 219
+ + + + T GTP ++APE++ GY+ D W+ G+ E+A G+ PF
Sbjct: 208 FAKRV------KGATWTLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 260
Query: 220 KYPPMKV 226
P+++
Sbjct: 261 ADQPIQI 267
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 114/258 (44%), Gaps = 16/258 (6%)
Query: 17 RLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLR 76
RL ++G+G V+ N + + L+ + +E Q M+ H +++
Sbjct: 21 RLEVKLGQGCFGEVWMGT---WNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ 77
Query: 77 AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHI 136
+ + + +++V YM+ G L +K + P + + + + Y+ ++
Sbjct: 78 LY-AVVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 136
Query: 137 HRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPC-WMAPEVMQQLHG- 194
HRD++A NIL+ N K+ADFG++ + D R F P W APE L+G
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF---PIKWTAPEA--ALYGR 191
Query: 195 YDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKEL 253
+ K+D+WSFGI EL G P+ P V L G +S +L
Sbjct: 192 FTIKSDVWSFGILLTELTTKGRVPY----PGMVNREVLDQVERGYRMPCPPECPESLHDL 247
Query: 254 VTACLVKDPKKRPTAEKL 271
+ C KDP++RPT E L
Sbjct: 248 MCQCWRKDPEERPTFEYL 265
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 93/188 (49%), Gaps = 15/188 (7%)
Query: 43 AIKVLDLEKCNN--DLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL 100
A+K+LD +K ++ E + ++ N P +++ SF L++VM Y+AGG
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 101 -HIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFG 159
H+ + F EP + + YLH I+RD+K N+LID G I++ DFG
Sbjct: 130 SHLRRIG---RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 160 VSACMFDAGDRQRSRN-TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
+ R + R GTP ++APE++ GY+ D W+ G+ E+A G+ PF
Sbjct: 187 FAK-------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 219 SKYPPMKV 226
P+++
Sbjct: 239 FADQPIQI 246
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 93/188 (49%), Gaps = 15/188 (7%)
Query: 43 AIKVLDLEKCNN--DLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL 100
A+K+LD +K ++ E + ++ N P +++ SF L++VM Y+AGG
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 101 -HIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFG 159
H+ + F EP + + YLH I+RD+K N+LID G I++ DFG
Sbjct: 130 SHLRRIG---RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 160 VSACMFDAGDRQRSRN-TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
+ R + R GTP ++APE++ GY+ D W+ G+ E+A G+ PF
Sbjct: 187 FAK-------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 219 SKYPPMKV 226
P+++
Sbjct: 239 FADEPIQI 246
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 93/188 (49%), Gaps = 15/188 (7%)
Query: 43 AIKVLDLEKCNN--DLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL 100
A+K+LD +K ++ E + ++ N P +++ SF L++VM Y+AGG
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 101 -HIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFG 159
H+ + F EP + + YLH I+RD+K N+LID G I++ DFG
Sbjct: 130 SHLRRIG---RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 160 VSACMFDAGDRQRSRN-TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
+ R + R GTP ++APE++ GY+ D W+ G+ E+A G+ PF
Sbjct: 187 FAK-------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 219 SKYPPMKV 226
P+++
Sbjct: 239 FADQPIQI 246
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 93/188 (49%), Gaps = 15/188 (7%)
Query: 43 AIKVLDLEKCNN--DLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL 100
A+K+LD +K ++ E + ++ N P +++ SF L++VM Y+AGG
Sbjct: 71 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 130
Query: 101 -HIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFG 159
H+ + F EP + + YLH I+RD+K N+LID G I++ DFG
Sbjct: 131 SHLRRIG---RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 187
Query: 160 VSACMFDAGDRQRSRN-TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
+ R + R GTP ++APE++ GY+ D W+ G+ E+A G+ PF
Sbjct: 188 FAK-------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPF 239
Query: 219 SKYPPMKV 226
P+++
Sbjct: 240 FADQPIQI 247
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 115/258 (44%), Gaps = 16/258 (6%)
Query: 17 RLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLR 76
RL ++G+G V+ N + + L+ + +E Q M+ H +++
Sbjct: 14 RLEVKLGQGCFGEVWMGT---WNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ 70
Query: 77 AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHI 136
+ + + +++V YM+ GS L +K + P + + + + Y+ ++
Sbjct: 71 LY-AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYV 129
Query: 137 HRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPC-WMAPEVMQQLHG- 194
HRD++A NIL+ N K+ADFG++ + D R F P W APE L+G
Sbjct: 130 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF---PIKWTAPEA--ALYGR 184
Query: 195 YDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKEL 253
+ K+D+WSFGI EL G P+ P V L G +S +L
Sbjct: 185 FTIKSDVWSFGILLTELTTKGRVPY----PGMVNREVLDQVERGYRMPCPPECPESLHDL 240
Query: 254 VTACLVKDPKKRPTAEKL 271
+ C K+P++RPT E L
Sbjct: 241 MCQCWRKEPEERPTFEYL 258
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 93/188 (49%), Gaps = 15/188 (7%)
Query: 43 AIKVLDLEKCNN--DLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL 100
A+K+LD +K ++ E + ++ N P +++ SF L++VM Y+AGG
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 101 -HIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFG 159
H+ + F EP + + YLH I+RD+K N+LID G I++ DFG
Sbjct: 130 SHLRRIG---RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 160 VSACMFDAGDRQRSRN-TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
+ R + R GTP ++APE++ GY+ D W+ G+ E+A G+ PF
Sbjct: 187 FAK-------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 219 SKYPPMKV 226
P+++
Sbjct: 239 FADQPIQI 246
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 93/188 (49%), Gaps = 15/188 (7%)
Query: 43 AIKVLDLEKCNN--DLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL 100
A+K+LD +K ++ E + ++ N P +++ SF L++VM Y+AGG
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 101 -HIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFG 159
H+ + F EP + + YLH I+RD+K N+LID G I++ DFG
Sbjct: 130 SHLRRIG---RFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 160 VSACMFDAGDRQRSRN-TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
+ R + R GTP ++APE++ GY+ D W+ G+ E+A G+ PF
Sbjct: 187 FAK-------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 219 SKYPPMKV 226
P+++
Sbjct: 239 FADQPIQI 246
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 123/275 (44%), Gaps = 23/275 (8%)
Query: 12 DAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNH 71
D+ Y L +++G G NE+VA+K + E+ + ++RE+ R H
Sbjct: 17 DSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYI--ERGEKIDENVKREIINHRSLRH 74
Query: 72 PNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLH 131
PN++R T L +VM Y +GG + +A F E ++ + + Y H
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFERICNA--GRFSEDEARFFFQQLISGVSYCH 132
Query: 132 FHGHIHRDVKAGNILIDSNGA--IKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVM 189
HRD+K N L+D + A +K+ FG S + + VGTP ++APEV+
Sbjct: 133 AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSK----SSVLHSQPKSTVGTPAYIAPEVL 188
Query: 190 QQLHGYDFK-ADIWSFGITALELAHGHAPFSKYPPMKVL------LMTLQNAPPGLDYER 242
+ YD K AD+WS G+T + G PF K ++ +Q A P DY
Sbjct: 189 LK-KEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIP--DY-- 243
Query: 243 DKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFF 277
S + L++ V DP KR + ++ H +F
Sbjct: 244 -VHISPECRHLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 93/188 (49%), Gaps = 15/188 (7%)
Query: 43 AIKVLDLEKCNN--DLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL 100
A+K+LD +K ++ E + ++ N P +++ SF L++VM Y+AGG
Sbjct: 65 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 124
Query: 101 -HIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFG 159
H+ + F EP + + YLH I+RD+K N+LID G I++ DFG
Sbjct: 125 SHLRRIG---RFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 181
Query: 160 VSACMFDAGDRQRSRN-TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
+ R + R GTP ++APE++ GY+ D W+ G+ E+A G+ PF
Sbjct: 182 FAK-------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPF 233
Query: 219 SKYPPMKV 226
P+++
Sbjct: 234 FADQPIQI 241
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 93/188 (49%), Gaps = 15/188 (7%)
Query: 43 AIKVLDLEKCNN--DLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL 100
A+K+LD +K ++ E + ++ N P +++ SF L++VM Y+AGG
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 101 -HIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFG 159
H+ + F EP + + YLH I+RD+K N+LID G I++ DFG
Sbjct: 130 SHLRRIG---RFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 160 VSACMFDAGDRQRSRN-TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
+ R + R GTP ++APE++ GY+ D W+ G+ E+A G+ PF
Sbjct: 187 FAK-------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 219 SKYPPMKV 226
P+++
Sbjct: 239 FADQPIQI 246
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 133/295 (45%), Gaps = 16/295 (5%)
Query: 8 RFPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMR 67
++ ++ D + ++G G VY + + VA+K L ++ +++ +E M+
Sbjct: 5 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMK 62
Query: 68 VTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKAL 127
HPN+++ T +++ +M G+ L ++ + V+ + + A+
Sbjct: 63 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAM 122
Query: 128 VYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPE 187
YL IHRD+ A N L+ N +K+ADFG+S M GD + W APE
Sbjct: 123 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM--TGDTFTAHAGAKFPIKWTAPE 180
Query: 188 VMQQLHGYDFKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLDY--ERDK 244
+ + + K+D+W+FG+ E+A +G +P+ P +V + + DY ER +
Sbjct: 181 SL-AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEK------DYRMERPE 233
Query: 245 RFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFKHARSNDFLARSIVDNLAPLGE 299
+ EL+ AC +P RP+ ++ H F+ ++ + L GE
Sbjct: 234 GCPEKVYELMRACWQWNPSDRPSFAEI--HQAFETMFQESSISDEVEKELGKRGE 286
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 93/188 (49%), Gaps = 15/188 (7%)
Query: 43 AIKVLDLEKCNN--DLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL 100
A+K+LD +K ++ E + ++ N P +++ SF L++VM Y+AGG
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 101 -HIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFG 159
H+ + F EP + + YLH I+RD+K N+LID G I++ DFG
Sbjct: 130 SHLRRIG---RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 160 VSACMFDAGDRQRSRN-TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
+ R + R GTP ++APE++ GY+ D W+ G+ E+A G+ PF
Sbjct: 187 FAK-------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 219 SKYPPMKV 226
P+++
Sbjct: 239 FADQPIQI 246
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 93/188 (49%), Gaps = 15/188 (7%)
Query: 43 AIKVLDLEKCNN--DLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL 100
A+K+LD +K ++ E + ++ N P +++ SF L++VM Y+ GG
Sbjct: 71 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMF 130
Query: 101 -HIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFG 159
H+ + F EP + + YLH I+RD+K N+LID G I++ DFG
Sbjct: 131 SHLRRIG---RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 187
Query: 160 VSACMFDAGDRQRSRN-TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
+ R + R T GTP ++APE++ GY+ D W+ G+ E+A G+ PF
Sbjct: 188 FAK-------RVKGRTWTLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPF 239
Query: 219 SKYPPMKV 226
P+++
Sbjct: 240 FADQPIQI 247
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 93/188 (49%), Gaps = 15/188 (7%)
Query: 43 AIKVLDLEKCNN--DLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL 100
A+K+LD +K ++ E + ++ N P +++ SF L++VM Y+AGG
Sbjct: 57 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 116
Query: 101 -HIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFG 159
H+ + F EP + + YLH I+RD+K N+LID G I++ DFG
Sbjct: 117 SHLRRIG---RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFG 173
Query: 160 VSACMFDAGDRQRSRN-TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
+ R + R GTP ++APE++ GY+ D W+ G+ E+A G+ PF
Sbjct: 174 FAK-------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPF 225
Query: 219 SKYPPMKV 226
P+++
Sbjct: 226 FADQPIQI 233
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 93/188 (49%), Gaps = 15/188 (7%)
Query: 43 AIKVLDLEKCNN--DLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL 100
A+K+LD +K ++ E + ++ N P +++ SF L++VM Y+AGG
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 101 -HIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFG 159
H+ + F EP + + YLH I+RD+K N+LID G I++ DFG
Sbjct: 130 SHLRRIG---RFAEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 160 VSACMFDAGDRQRSRN-TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
+ R + R GTP ++APE++ GY+ D W+ G+ E+A G+ PF
Sbjct: 187 FAK-------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 219 SKYPPMKV 226
P+++
Sbjct: 239 FADQPIQI 246
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 126/275 (45%), Gaps = 23/275 (8%)
Query: 12 DAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNH 71
D+ Y L +++G G NE+VA+K + E+ + ++RE+ R H
Sbjct: 17 DSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYI--ERGEKIDENVKREIINHRSLRH 74
Query: 72 PNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLH 131
PN++R T L +VM Y +GG + +A F E ++ + + Y H
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFERICNA--GRFSEDEARFFFQQLISGVSYCH 132
Query: 132 FHGHIHRDVKAGNILIDSNGA--IKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVM 189
HRD+K N L+D + A +K+ FG S + + ++T VGTP ++APEV+
Sbjct: 133 AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSK---SSVLHSQPKDT-VGTPAYIAPEVL 188
Query: 190 QQLHGYDFK-ADIWSFGITALELAHGHAPFSKYPPMKVL------LMTLQNAPPGLDYER 242
+ YD K AD+WS G+T + G PF K ++ +Q A P DY
Sbjct: 189 LK-KEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIP--DY-- 243
Query: 243 DKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFF 277
S + L++ V DP KR + ++ H +F
Sbjct: 244 -VHISPECRHLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 93/188 (49%), Gaps = 15/188 (7%)
Query: 43 AIKVLDLEKCNN--DLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL 100
A+K+LD +K ++ E + ++ N P +++ SF L++VM Y+AGG
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 101 -HIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFG 159
H+ + F EP + + YLH I+RD+K N+LID G I++ DFG
Sbjct: 130 SHLRRIG---RFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 160 VSACMFDAGDRQRSRN-TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
+ R + R GTP ++APE++ GY+ D W+ G+ E+A G+ PF
Sbjct: 187 FAK-------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 219 SKYPPMKV 226
P+++
Sbjct: 239 FADQPIQI 246
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 124/284 (43%), Gaps = 48/284 (16%)
Query: 13 AKDYRLYEE-------VGEGVSATVYRALCI-PLNEIVAIKVLDLEKCNND--LDGIRRE 62
+DY + E +GEG V++ + + P N +A+ + + C +D + +E
Sbjct: 5 TRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQE 64
Query: 63 VQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGG---SCLHIMKSAYPEGFEEPVIATL 119
TMR +HP++++ T + +W++M G S L + K + +A+L
Sbjct: 65 ALTMRQFDHPHIVKL-IGVITENPVWIIMELCTLGELRSFLQVRKYSLD-------LASL 116
Query: 120 LRETLK---ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNT 176
+ + AL YL +HRD+ A N+L+ SN +KL DFG+S M D+ + S+
Sbjct: 117 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 176
Query: 177 FVGTPCWMAPEVMQQLHGYDFKADIWSFGITALE-LAHGHAPFSKYPPMKVL-------- 227
WMAPE + + +D+W FG+ E L HG PF V+
Sbjct: 177 LPIK--WMAPESI-NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGER 233
Query: 228 LMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKL 271
L N PP L L+T C DP +RP +L
Sbjct: 234 LPMPPNCPPTL------------YSLMTKCWAYDPSRRPRFTEL 265
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 93/188 (49%), Gaps = 15/188 (7%)
Query: 43 AIKVLDLEKCNN--DLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL 100
A+K+LD +K ++ E + ++ N P +++ SF L++VM Y+ GG
Sbjct: 56 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMF 115
Query: 101 -HIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFG 159
H+ + F EP + + YLH I+RD+K N+LID G I++ DFG
Sbjct: 116 SHLRRIG---RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 172
Query: 160 VSACMFDAGDRQRSRN-TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
+ R + R T GTP ++APE++ GY+ D W+ G+ E+A G+ PF
Sbjct: 173 FAK-------RVKGRTWTLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPF 224
Query: 219 SKYPPMKV 226
P+++
Sbjct: 225 FADQPIQI 232
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 93/188 (49%), Gaps = 15/188 (7%)
Query: 43 AIKVLDLEKCNN--DLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL 100
A+K+LD +K ++ E + ++ N P +++ SF L++VM Y+AGG
Sbjct: 91 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 150
Query: 101 -HIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFG 159
H+ + F EP + + YLH I+RD+K N+LID G I++ DFG
Sbjct: 151 SHLRRIG---RFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 207
Query: 160 VSACMFDAGDRQRSRN-TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
+ R + R GTP ++APE++ GY+ D W+ G+ E+A G+ PF
Sbjct: 208 FA-------KRVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPF 259
Query: 219 SKYPPMKV 226
P+++
Sbjct: 260 FADQPIQI 267
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 124/284 (43%), Gaps = 48/284 (16%)
Query: 13 AKDYRLYEE-------VGEGVSATVYRALCI-PLNEIVAIKVLDLEKCNND--LDGIRRE 62
+DY + E +GEG V++ + + P N +A+ + + C +D + +E
Sbjct: 2 TRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQE 61
Query: 63 VQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGG---SCLHIMKSAYPEGFEEPVIATL 119
TMR +HP++++ T + +W++M G S L + K + +A+L
Sbjct: 62 ALTMRQFDHPHIVKL-IGVITENPVWIIMELCTLGELRSFLQVRKFSLD-------LASL 113
Query: 120 LRETLK---ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNT 176
+ + AL YL +HRD+ A N+L+ SN +KL DFG+S M D+ + S+
Sbjct: 114 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGK 173
Query: 177 FVGTPCWMAPEVMQQLHGYDFKADIWSFGITALE-LAHGHAPFSKYPPMKVL-------- 227
WMAPE + + +D+W FG+ E L HG PF V+
Sbjct: 174 LPIK--WMAPESI-NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGER 230
Query: 228 LMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKL 271
L N PP L L+T C DP +RP +L
Sbjct: 231 LPMPPNCPPTL------------YSLMTKCWAYDPSRRPRFTEL 262
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 124/284 (43%), Gaps = 48/284 (16%)
Query: 13 AKDYRLYEE-------VGEGVSATVYRALCI-PLNEIVAIKVLDLEKCNND--LDGIRRE 62
+DY + E +GEG V++ + + P N +A+ + + C +D + +E
Sbjct: 4 TRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQE 63
Query: 63 VQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGG---SCLHIMKSAYPEGFEEPVIATL 119
TMR +HP++++ T + +W++M G S L + K + +A+L
Sbjct: 64 ALTMRQFDHPHIVKL-IGVITENPVWIIMELCTLGELRSFLQVRKYSLD-------LASL 115
Query: 120 LRETLK---ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNT 176
+ + AL YL +HRD+ A N+L+ SN +KL DFG+S M D+ + S+
Sbjct: 116 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 175
Query: 177 FVGTPCWMAPEVMQQLHGYDFKADIWSFGITALE-LAHGHAPFSKYPPMKVL-------- 227
WMAPE + + +D+W FG+ E L HG PF V+
Sbjct: 176 LPIK--WMAPESI-NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGER 232
Query: 228 LMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKL 271
L N PP L L+T C DP +RP +L
Sbjct: 233 LPMPPNCPPTL------------YSLMTKCWAYDPSRRPRFTEL 264
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 124/284 (43%), Gaps = 48/284 (16%)
Query: 13 AKDYRLYEE-------VGEGVSATVYRALCI-PLNEIVAIKVLDLEKCNND--LDGIRRE 62
+DY + E +GEG V++ + + P N +A+ + + C +D + +E
Sbjct: 30 TRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQE 89
Query: 63 VQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGG---SCLHIMKSAYPEGFEEPVIATL 119
TMR +HP++++ T + +W++M G S L + K + +A+L
Sbjct: 90 ALTMRQFDHPHIVKL-IGVITENPVWIIMELCTLGELRSFLQVRKYSLD-------LASL 141
Query: 120 LRETLK---ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNT 176
+ + AL YL +HRD+ A N+L+ SN +KL DFG+S M D+ + S+
Sbjct: 142 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 201
Query: 177 FVGTPCWMAPEVMQQLHGYDFKADIWSFGITALE-LAHGHAPFSKYPPMKVL-------- 227
WMAPE + + +D+W FG+ E L HG PF V+
Sbjct: 202 LPIK--WMAPESI-NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGER 258
Query: 228 LMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKL 271
L N PP L L+T C DP +RP +L
Sbjct: 259 LPMPPNCPPTL------------YSLMTKCWAYDPSRRPRFTEL 290
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 114/258 (44%), Gaps = 16/258 (6%)
Query: 17 RLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLR 76
RL ++G+G V+ N + + L+ + +E Q M+ H +++
Sbjct: 11 RLEVKLGQGCFGEVWMGT---WNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ 67
Query: 77 AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHI 136
+ + + + +V YM+ GS L +K + P + + + + Y+ ++
Sbjct: 68 LY-AVVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYV 126
Query: 137 HRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPC-WMAPEVMQQLHG- 194
HRD++A NIL+ N K+ADFG++ + D R F P W APE L+G
Sbjct: 127 HRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKF---PIKWTAPEA--ALYGR 181
Query: 195 YDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKEL 253
+ K+D+WSFGI EL G P+ P V L G +S +L
Sbjct: 182 FTIKSDVWSFGILLTELTTKGRVPY----PGMVNREVLDQVERGYRMPCPPECPESLHDL 237
Query: 254 VTACLVKDPKKRPTAEKL 271
+ C K+P++RPT E L
Sbjct: 238 MCQCWRKEPEERPTFEYL 255
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 125/305 (40%), Gaps = 54/305 (17%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVL---------DLEKCNND-------LDG 58
DYR+ + +G + LC N+ A+K D K NND D
Sbjct: 32 DYRIIRTLNQGKFNKI--ILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDD 89
Query: 59 IRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL------HIMKSAYPEGFE 112
+ E+Q + + L T ++++ YM S L ++ Y
Sbjct: 90 FKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIP 149
Query: 113 EPVIATLLRETLKALVYLHFHGHI-HRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQ 171
VI +++ L + Y+H +I HRDVK NIL+D NG +KL+DFG S M D +
Sbjct: 150 IQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKG 209
Query: 172 RSRNTFVGTPCWMAPEVMQQLHGYD-FKADIWSFGITALELAHGHAPFSKYPPMKVLLMT 230
SR GT +M PE Y+ K DIWS GI + + PFS +K+ L+
Sbjct: 210 -SR----GTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFS----LKISLVE 260
Query: 231 LQN--APPGLDYERDKR-----------------FSKSFKELVTACLVKDPKKRPTAEKL 271
L N ++Y D+ S + + L K+P +R T+E
Sbjct: 261 LFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDA 320
Query: 272 MKHHF 276
+KH +
Sbjct: 321 LKHEW 325
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 93/188 (49%), Gaps = 15/188 (7%)
Query: 43 AIKVLDLEKCNN--DLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL 100
A+K+LD +K ++ E + ++ N P +++ SF L++VM Y+AGG
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 101 -HIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFG 159
H+ + F EP + + YLH I+RD+K N++ID G I++ DFG
Sbjct: 130 SHLRRIG---RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFG 186
Query: 160 VSACMFDAGDRQRSRN-TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
+ R + R GTP ++APE++ GY+ D W+ G+ E+A G+ PF
Sbjct: 187 FAK-------RVKGRTWXLCGTPEYLAPEIIIS-KGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 219 SKYPPMKV 226
P+++
Sbjct: 239 FADQPIQI 246
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 114/258 (44%), Gaps = 16/258 (6%)
Query: 17 RLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLR 76
RL ++G+G V+ N + + L+ + +E Q M+ H +++
Sbjct: 18 RLEVKLGQGCFGEVWMGT---WNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ 74
Query: 77 AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHI 136
+ + + +++V YM GS L +K + P + + + + Y+ ++
Sbjct: 75 LY-AVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYV 133
Query: 137 HRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPC-WMAPEVMQQLHG- 194
HRD++A NIL+ N K+ADFG++ + D R F P W APE L+G
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF---PIKWTAPEA--ALYGR 188
Query: 195 YDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKEL 253
+ K+D+WSFGI EL G P+ P V L G +S +L
Sbjct: 189 FTIKSDVWSFGILLTELTTKGRVPY----PGMVNREVLDQVERGYRMPCPPECPESLHDL 244
Query: 254 VTACLVKDPKKRPTAEKL 271
+ C K+P++RPT E L
Sbjct: 245 MCQCWRKEPEERPTFEYL 262
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 124/284 (43%), Gaps = 48/284 (16%)
Query: 13 AKDYRLYEE-------VGEGVSATVYRALCI-PLNEIVAIKVLDLEKCNND--LDGIRRE 62
+DY + E +GEG V++ + + P N +A+ + + C +D + +E
Sbjct: 2 TRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQE 61
Query: 63 VQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGG---SCLHIMKSAYPEGFEEPVIATL 119
TMR +HP++++ T + +W++M G S L + K + +A+L
Sbjct: 62 ALTMRQFDHPHIVKL-IGVITENPVWIIMELCTLGELRSFLQVRKYSLD-------LASL 113
Query: 120 LRETLK---ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNT 176
+ + AL YL +HRD+ A N+L+ SN +KL DFG+S M D+ + S+
Sbjct: 114 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 173
Query: 177 FVGTPCWMAPEVMQQLHGYDFKADIWSFGITALE-LAHGHAPFSKYPPMKVL-------- 227
WMAPE + + +D+W FG+ E L HG PF V+
Sbjct: 174 LPIK--WMAPESI-NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGER 230
Query: 228 LMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKL 271
L N PP L L+T C DP +RP +L
Sbjct: 231 LPMPPNCPPTL------------YSLMTKCWAYDPSRRPRFTEL 262
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 130/292 (44%), Gaps = 39/292 (13%)
Query: 4 VVEKRFPVDAKDYRLYEEVGEGVSATVYRALCIPLN----EIVAIKVLDLEKCNNDLDGI 59
V KR+ +D +GEG V P N E+VA+K L + G
Sbjct: 27 VFHKRYLKKIRD------LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGW 80
Query: 60 RREVQTMRVTNHPNVLR--AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIA 117
++E+ +R H ++++ C L +VM Y+ GS ++ P +A
Sbjct: 81 KQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGS----LRDYLPR--HSIGLA 134
Query: 118 TLL---RETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSR 174
LL ++ + + YLH +IHRD+ A N+L+D++ +K+ DFG++ + + + R R
Sbjct: 135 QLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVR 194
Query: 175 NTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVL------- 227
W APE +++ Y + +D+WSFG+T EL H S+ PP K L
Sbjct: 195 EDGDSPVFWYAPECLKEYKFY-YASDVWSFGVTLYELL-THCDSSQSPPTKFLELIGIAQ 252
Query: 228 -LMTLQNAPPGLDYERDKRFSKSFK------ELVTACLVKDPKKRPTAEKLM 272
MT+ L ER +R + K L+ C + RPT E L+
Sbjct: 253 GQMTVLRLTELL--ERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLI 302
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 93/188 (49%), Gaps = 15/188 (7%)
Query: 43 AIKVLDLEKCNN--DLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL 100
A+K+LD +K ++ E + ++ N P +++ SF L++VM Y+AGG
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 101 -HIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFG 159
H+ + F EP + + YLH I+RD+K N+LID G I++ DFG
Sbjct: 130 SHLRRIG---RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 160 VSACMFDAGDRQRSRN-TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
+ R + R GTP ++APE++ GY+ D W+ G+ ++A G+ PF
Sbjct: 187 FAK-------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYQMAAGYPPF 238
Query: 219 SKYPPMKV 226
P+++
Sbjct: 239 FADQPIQI 246
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 121/281 (43%), Gaps = 42/281 (14%)
Query: 13 AKDYRLYEE-------VGEGVSATVYRALCI-PLNEIVAIKVLDLEKCNND--LDGIRRE 62
+DY + E +GEG V++ + + P N +A+ + + C +D + +E
Sbjct: 7 TRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQE 66
Query: 63 VQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGG---SCLHIMKSAYPEGFEEPVIATL 119
TMR +HP++++ T + +W++M G S L + K Y ++
Sbjct: 67 ALTMRQFDHPHIVKL-IGVITENPVWIIMELCTLGELRSFLQVRK--YSLDLASLILYAY 123
Query: 120 LRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVG 179
T AL YL +HRD+ A N+L+ SN +KL DFG+S M D+ + S+
Sbjct: 124 QLST--ALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI 181
Query: 180 TPCWMAPEVMQQLHGYDFKADIWSFGITALE-LAHGHAPFSKYPPMKVL--------LMT 230
WMAPE + + +D+W FG+ E L HG PF V+ L
Sbjct: 182 K--WMAPESI-NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPM 238
Query: 231 LQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKL 271
N PP L L+T C DP +RP +L
Sbjct: 239 PPNCPPTL------------YSLMTKCWAYDPSRRPRFTEL 267
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 114/258 (44%), Gaps = 16/258 (6%)
Query: 17 RLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLR 76
RL ++G+G V+ N + + L+ + +E Q M+ H +++
Sbjct: 18 RLEVKLGQGCFGEVWMGT---WNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ 74
Query: 77 AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHI 136
+ + + +++V YM GS L +K + P + + + + Y+ ++
Sbjct: 75 LY-AVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYV 133
Query: 137 HRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPC-WMAPEVMQQLHG- 194
HRD++A NIL+ N K+ADFG++ + D R F P W APE L+G
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKF---PIKWTAPEA--ALYGR 188
Query: 195 YDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKEL 253
+ K+D+WSFGI EL G P+ P V L G +S +L
Sbjct: 189 FTIKSDVWSFGILLTELTTKGRVPY----PGMVNREVLDQVERGYRMPCPPECPESLHDL 244
Query: 254 VTACLVKDPKKRPTAEKL 271
+ C K+P++RPT E L
Sbjct: 245 MCQCWRKEPEERPTFEYL 262
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 93/188 (49%), Gaps = 15/188 (7%)
Query: 43 AIKVLDLEKCNN--DLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL 100
A+K+LD +K +++ E + ++ N P +++ SF L++VM Y GG
Sbjct: 70 AMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMF 129
Query: 101 -HIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFG 159
H+ + F EP + + YLH I+RD+K N++ID G IK+ DFG
Sbjct: 130 SHLRRIG---RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFG 186
Query: 160 VSACMFDAGDRQRSRN-TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
++ R + R GTP ++APE++ GY+ D W+ G+ E+A G+ PF
Sbjct: 187 LAK-------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 219 SKYPPMKV 226
P+++
Sbjct: 239 FADQPIQI 246
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 119/268 (44%), Gaps = 41/268 (15%)
Query: 22 VGEGVSATVYRALCI-PLNEIVAIKVLDLEKCNND--LDGIRREVQTMRVTNHPNVLRAH 78
+GEG V++ + + P N +A+ + + C +D + +E TMR +HP++++
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL- 73
Query: 79 CSFTTGHCLWVVMPYMAGG---SCLHIMKSAYPEGFEEPVIATLLRETLK---ALVYLHF 132
T + +W++M G S L + K + +A+L+ + AL YL
Sbjct: 74 IGVITENPVWIIMELCTLGELRSFLQVRKYSLD-------LASLILYAYQLSTALAYLES 126
Query: 133 HGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQL 192
+HRD+ A N+L+ SN +KL DFG+S M D+ + S+ WMAPE +
Sbjct: 127 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK--WMAPESI-NF 183
Query: 193 HGYDFKADIWSFGITALE-LAHGHAPFSKYPPMKVL--------LMTLQNAPPGLDYERD 243
+ +D+W FG+ E L HG PF V+ L N PP L
Sbjct: 184 RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTL----- 238
Query: 244 KRFSKSFKELVTACLVKDPKKRPTAEKL 271
L+T C DP +RP +L
Sbjct: 239 -------YSLMTKCWAYDPSRRPRFTEL 259
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 124/284 (43%), Gaps = 48/284 (16%)
Query: 13 AKDYRLYEE-------VGEGVSATVYRALCI-PLNEIVAIKVLDLEKCNND--LDGIRRE 62
+DY + E +GEG V++ + + P N +A+ + + C +D + +E
Sbjct: 2 TRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQE 61
Query: 63 VQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGG---SCLHIMKSAYPEGFEEPVIATL 119
TMR +HP++++ T + +W++M G S L + K + +A+L
Sbjct: 62 ALTMRQFDHPHIVKL-IGVITENPVWIIMELCTLGELRSFLQVRKYSLD-------LASL 113
Query: 120 LRETLK---ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNT 176
+ + AL YL +HRD+ A N+L+ SN +KL DFG+S M D+ + S+
Sbjct: 114 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 173
Query: 177 FVGTPCWMAPEVMQQLHGYDFKADIWSFGITALE-LAHGHAPFSKYPPMKVL-------- 227
WMAPE + + +D+W FG+ E L HG PF V+
Sbjct: 174 LPIK--WMAPESI-NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGER 230
Query: 228 LMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKL 271
L N PP L L+T C DP +RP +L
Sbjct: 231 LPMPPNCPPTL------------YSLMTKCWAYDPSRRPRFTEL 262
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 116/258 (44%), Gaps = 35/258 (13%)
Query: 31 YRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVV 90
Y A+ I E++ K +++ E + ++ + HP + SF T L V
Sbjct: 178 YYAMKILKKEVIVAK--------DEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 229
Query: 91 MPYMAGGSCL-HIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHI-HRDVKAGNILID 148
M Y GG H+ + F E E + AL YLH ++ +RD+K N+++D
Sbjct: 230 MEYANGGELFFHLSRERV---FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLD 286
Query: 149 SNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITA 208
+G IK+ DFG+ G + TF GTP ++APEV++ + Y D W G+
Sbjct: 287 KDGHIKITDFGLCKEGIKDG---ATMKTFCGTPEYLAPEVLED-NDYGRAVDWWGLGVVM 342
Query: 209 LELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSF----KELVTACLVKDPKK 264
E+ G PF K+ + L + RF ++ K L++ L KDPK+
Sbjct: 343 YEMMCGRLPFYNQDHEKLFELILME---------EIRFPRTLGPEAKSLLSGLLKKDPKQ 393
Query: 265 R-----PTAEKLMKHHFF 277
R A+++M+H FF
Sbjct: 394 RLGGGSEDAKEIMQHRFF 411
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 123/280 (43%), Gaps = 29/280 (10%)
Query: 11 VDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEK--CNNDLDGIRREVQTMRV 68
V ++ + +G+G V A+K+L E +++ E + ++
Sbjct: 145 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 204
Query: 69 TNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL-HIMKSAYPEGFEEPVIATLLRETLKAL 127
+ HP + SF T L VM Y GG H+ + F E E + AL
Sbjct: 205 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERV---FSEDRARFYGAEIVSAL 261
Query: 128 VYLHFHGHI-HRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAP 186
YLH ++ +RD+K N+++D +G IK+ DFG+ G + TF GTP ++AP
Sbjct: 262 DYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG---ATMKTFCGTPEYLAP 318
Query: 187 EVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRF 246
EV++ + Y D W G+ E+ G PF K+ + L + RF
Sbjct: 319 EVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME---------EIRF 368
Query: 247 SKSF----KELVTACLVKDPKKR-----PTAEKLMKHHFF 277
++ K L++ L KDPK+R A+++M+H FF
Sbjct: 369 PRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 408
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 92/188 (48%), Gaps = 15/188 (7%)
Query: 43 AIKVLDLEKCNN--DLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL 100
A+K+LD +K ++ E + ++ N P +++ SF L++VM Y+ GG
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMF 129
Query: 101 -HIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFG 159
H+ + F EP + + YLH I+RD+K N+LID G I++ DFG
Sbjct: 130 SHLRRIG---RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 160 VSACMFDAGDRQRSRN-TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
+ R + R GTP ++APE++ GY+ D W+ G+ E+A G+ PF
Sbjct: 187 FAK-------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 219 SKYPPMKV 226
P+++
Sbjct: 239 FADQPIQI 246
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 92/188 (48%), Gaps = 15/188 (7%)
Query: 43 AIKVLDLEKCNN--DLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL 100
A+K+LD +K ++ E + ++ N P +++ SF L++VM Y+ GG
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMF 129
Query: 101 -HIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFG 159
H+ + F EP + + YLH I+RD+K N+LID G I++ DFG
Sbjct: 130 SHLRRIG---RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 160 VSACMFDAGDRQRSRN-TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
+ R + R GTP ++APE++ GY+ D W+ G+ E+A G+ PF
Sbjct: 187 FAK-------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 219 SKYPPMKV 226
P+++
Sbjct: 239 FADQPIQI 246
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 124/261 (47%), Gaps = 22/261 (8%)
Query: 17 RLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLR 76
+L +++G G V+ A N+ + V ++ + ++ E M+ H +++
Sbjct: 191 KLEKKLGAGQFGEVWMAT---YNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVK 247
Query: 77 AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPV--IATLLRETLKALVYLHFHG 134
H + T ++++ +MA GS L +KS EG ++P+ + + + + ++
Sbjct: 248 LH-AVVTKEPIYIITEFMAKGSLLDFLKSD--EGSKQPLPKLIDFSAQIAEGMAFIEQRN 304
Query: 135 HIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPC-WMAPEVMQQLH 193
+IHRD++A NIL+ ++ K+ADFG++ + D R F P W APE +
Sbjct: 305 YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKF---PIKWTAPEAI-NFG 360
Query: 194 GYDFKADIWSFGITALELA-HGHAPFSKYPPMK--VLLMTLQNAPPGLDYERDKRFSKSF 250
+ K+D+WSFGI +E+ +G P YP M ++ L+ G R + +
Sbjct: 361 SFTIKSDVWSFGILLMEIVTYGRIP---YPGMSNPEVIRALER---GYRMPRPENCPEEL 414
Query: 251 KELVTACLVKDPKKRPTAEKL 271
++ C P++RPT E +
Sbjct: 415 YNIMMRCWKNRPEERPTFEYI 435
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 105/213 (49%), Gaps = 13/213 (6%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVL---DLEKCNNDLDGIRREVQTMRVTNH 71
D+ + + +G G + V ++ A+K++ D+ K ++ R E + +
Sbjct: 62 DFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLK-RGEVSCFREERDVLVNGDR 120
Query: 72 PNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLH 131
+ + H +F + L++VM Y GG L ++ S + E + L E + A+ +H
Sbjct: 121 RWITQLHFAFQDENYLYLVMEYYVGGDLLTLL-SKFGERIPAEMARFYLAEIVMAIDSVH 179
Query: 132 FHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQ 191
G++HRD+K NIL+D G I+LADFG +C+ D VGTP +++PE++Q
Sbjct: 180 RLGYVHRDIKPDNILLDRCGHIRLADFG--SCLKLRADGTVRSLVAVGTPDYLSPEILQA 237
Query: 192 LHGYDF------KADIWSFGITALELAHGHAPF 218
+ G + D W+ G+ A E+ +G PF
Sbjct: 238 VGGGPGTGSYGPECDWWALGVFAYEMFYGQTPF 270
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 120/270 (44%), Gaps = 18/270 (6%)
Query: 6 EKRFPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQT 65
E + V + +L E +G G V+ N + V L++ + D E
Sbjct: 13 EDEWEVPRETLKLVERLGAGQFGEVWMGY---YNGHTKVAVKSLKQGSMSPDAFLAEANL 69
Query: 66 MRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPV--IATLLRET 123
M+ H ++R + + T ++++ YM GS + +K+ P G + + + + +
Sbjct: 70 MKQLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQI 126
Query: 124 LKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPC- 182
+ + ++ +IHRD++A NIL+ + K+ADFG++ + D R F P
Sbjct: 127 AEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF---PIK 183
Query: 183 WMAPEVMQQLHGYDFKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLDYE 241
W APE + + K+D+WSFGI E+ HG P+ +V +QN G
Sbjct: 184 WTAPEAI-NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV----IQNLERGYRMV 238
Query: 242 RDKRFSKSFKELVTACLVKDPKKRPTAEKL 271
R + +L+ C + P+ RPT + L
Sbjct: 239 RPDNCPEELYQLMRLCWKERPEDRPTFDYL 268
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 92/188 (48%), Gaps = 15/188 (7%)
Query: 43 AIKVLDLEKCNN--DLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL 100
A+K+LD +K ++ E + ++ N P +++ SF L++VM Y+AGG
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 101 -HIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFG 159
H+ + F EP + + YLH I+RD+K N+LID G I++ DFG
Sbjct: 130 SHLRRIG---RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 160 VSACMFDAGDRQRSRN-TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
+ R + R GTP +APE++ GY+ D W+ G+ E+A G+ PF
Sbjct: 187 FAK-------RVKGRTWXLCGTPEALAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 219 SKYPPMKV 226
P+++
Sbjct: 239 FADQPIQI 246
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 92/188 (48%), Gaps = 15/188 (7%)
Query: 43 AIKVLDLEKCNN--DLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL 100
A+K+LD +K ++ E + ++ N P +++ SF L++VM Y+ GG
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMF 129
Query: 101 -HIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFG 159
H+ + F EP + + YLH I+RD+K N+LID G I++ DFG
Sbjct: 130 SHLRRIG---RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 160 VSACMFDAGDRQRSRN-TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
+ R + R GTP ++APE++ GY+ D W+ G+ E+A G+ PF
Sbjct: 187 FAK-------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 219 SKYPPMKV 226
P+++
Sbjct: 239 FADQPIQI 246
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 120/267 (44%), Gaps = 19/267 (7%)
Query: 21 EVGEGVSATVYRALCIPLN-EIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAHC 79
E+G G TVY+ L E+ ++ D + ++ + E + ++ HPN++R +
Sbjct: 33 EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 80 SFTT----GHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGH 135
S+ + C+ +V G+ +K + V+ + R+ LK L +LH
Sbjct: 93 SWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIK--VLRSWCRQILKGLQFLHTRTP 150
Query: 136 --IHRDVKAGNILIDS-NGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQL 192
IHRD+K NI I G++K+ D G++ R +GTP + APE ++
Sbjct: 151 PIIHRDLKCDNIFITGPTGSVKIGDLGLATL-----KRASFAKAVIGTPEFXAPEXYEE- 204
Query: 193 HGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKE 252
YD D+++FG LE A P+S+ + + + + DK KE
Sbjct: 205 -KYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPASF--DKVAIPEVKE 261
Query: 253 LVTACLVKDPKKRPTAEKLMKHHFFKH 279
++ C+ ++ +R + + L+ H FF+
Sbjct: 262 IIEGCIRQNKDERYSIKDLLNHAFFQE 288
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 92/188 (48%), Gaps = 15/188 (7%)
Query: 43 AIKVLDLEKCNN--DLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL 100
A+K+LD +K ++ E + ++ N P +++ SF L++VM Y+ GG
Sbjct: 71 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMF 130
Query: 101 -HIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFG 159
H+ + F EP + + YLH I+RD+K N+LID G I++ DFG
Sbjct: 131 SHLRRIG---RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 187
Query: 160 VSACMFDAGDRQRSRN-TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
+ R + R GTP ++APE++ GY+ D W+ G+ E+A G+ PF
Sbjct: 188 FAK-------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPF 239
Query: 219 SKYPPMKV 226
P+++
Sbjct: 240 FADQPIQI 247
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 125/266 (46%), Gaps = 14/266 (5%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEK-CNNDLDG-IRREVQTMRVTNHP 72
+Y++ + +GEG V A + VA+K+++ + +D+ G I RE+ +R+ HP
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 74
Query: 73 NVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHF 132
++++ + + + +V+ Y +I++ + E ++ + A+ Y H
Sbjct: 75 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQR---DKMSEQEARRFFQQIISAVEYCHR 131
Query: 133 HGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQL 192
H +HRD+K N+L+D + +K+ADFG+S M D + S G+P + APEV+
Sbjct: 132 HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS----CGSPNYAAPEVISGK 187
Query: 193 HGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKE 252
+ D+WS G+ + PF + VL + N Y K S
Sbjct: 188 LYAGPEVDVWSCGVILYVMLCRRLPFDD-ESIPVLFKNISNGV----YTLPKFLSPGAAG 242
Query: 253 LVTACLVKDPKKRPTAEKLMKHHFFK 278
L+ L+ +P R + ++M+ +FK
Sbjct: 243 LIKRMLIVNPLNRISIHEIMQDDWFK 268
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 92/188 (48%), Gaps = 15/188 (7%)
Query: 43 AIKVLDLEKCNN--DLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL 100
A+K+LD +K ++ E + ++ N P +++ SF L++VM Y+ GG
Sbjct: 71 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMF 130
Query: 101 -HIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFG 159
H+ + F EP + + YLH I+RD+K N+LID G I++ DFG
Sbjct: 131 SHLRRIG---RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 187
Query: 160 VSACMFDAGDRQRSRN-TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
+ R + R GTP ++APE++ GY+ D W+ G+ E+A G+ PF
Sbjct: 188 FAK-------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPF 239
Query: 219 SKYPPMKV 226
P+++
Sbjct: 240 FADQPIQI 247
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 92/188 (48%), Gaps = 15/188 (7%)
Query: 43 AIKVLDLEKCNN--DLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL 100
A+K+LD +K ++ E + ++ N P +++ SF L++VM Y+ GG
Sbjct: 63 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMF 122
Query: 101 -HIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFG 159
H+ + F EP + + YLH I+RD+K N+LID G I++ DFG
Sbjct: 123 SHLRRIG---RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 179
Query: 160 VSACMFDAGDRQRSRN-TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
+ R + R GTP ++APE++ GY+ D W+ G+ E+A G+ PF
Sbjct: 180 FAK-------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPF 231
Query: 219 SKYPPMKV 226
P+++
Sbjct: 232 FADQPIQI 239
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 107/236 (45%), Gaps = 15/236 (6%)
Query: 39 NEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGS 98
N VAIK L + + E Q M+ H +++ + + + +++V YM GS
Sbjct: 33 NTKVAIKTL--KPGTMSPESFLEEAQIMKKLKHDKLVQLY-AVVSEEPIYIVTEYMNKGS 89
Query: 99 CLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADF 158
L +K + P + + + + Y+ +IHRD+++ NIL+ + K+ADF
Sbjct: 90 LLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGNGLICKIADF 149
Query: 159 GVSACMFDAGDRQRSRNTFVGTPC-WMAPEVMQQLHG-YDFKADIWSFGITALELA-HGH 215
G++ + D R F P W APE L+G + K+D+WSFGI EL G
Sbjct: 150 GLARLIEDNEXTARQGAKF---PIKWTAPEA--ALYGRFTIKSDVWSFGILLTELVTKGR 204
Query: 216 APFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKL 271
P YP M L+ G + S EL+ C KDP++RPT E L
Sbjct: 205 VP---YPGMNN-REVLEQVERGYRMPCPQDCPISLHELMIHCWKKDPEERPTFEYL 256
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 125/266 (46%), Gaps = 14/266 (5%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEK-CNNDLDG-IRREVQTMRVTNHP 72
+Y++ + +GEG V A + VA+K+++ + +D+ G I RE+ +R+ HP
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 73
Query: 73 NVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHF 132
++++ + + + +V+ Y +I++ + E ++ + A+ Y H
Sbjct: 74 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQR---DKMSEQEARRFFQQIISAVEYCHR 130
Query: 133 HGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQL 192
H +HRD+K N+L+D + +K+ADFG+S M D + S G+P + APEV+
Sbjct: 131 HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS----CGSPNYAAPEVISGK 186
Query: 193 HGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKE 252
+ D+WS G+ + PF + VL + N Y K S
Sbjct: 187 LYAGPEVDVWSCGVILYVMLCRRLPFDD-ESIPVLFKNISNGV----YTLPKFLSPGAAG 241
Query: 253 LVTACLVKDPKKRPTAEKLMKHHFFK 278
L+ L+ +P R + ++M+ +FK
Sbjct: 242 LIKRMLIVNPLNRISIHEIMQDDWFK 267
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 92/188 (48%), Gaps = 15/188 (7%)
Query: 43 AIKVLDLEKCNN--DLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL 100
A+K+LD +K ++ E + ++ N P +++ SF L++VM Y+ GG
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMF 129
Query: 101 -HIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFG 159
H+ + F EP + + YLH I+RD+K N+LID G I++ DFG
Sbjct: 130 SHLRRIG---RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 160 VSACMFDAGDRQRSRN-TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
+ R + R GTP ++APE++ GY+ D W+ G+ E+A G+ PF
Sbjct: 187 FAK-------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 219 SKYPPMKV 226
P+++
Sbjct: 239 FADQPIQI 246
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 92/188 (48%), Gaps = 15/188 (7%)
Query: 43 AIKVLDLEKCNN--DLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL 100
A+K+LD +K ++ E + ++ N P +++ SF L++VM Y+ GG
Sbjct: 71 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMF 130
Query: 101 -HIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFG 159
H+ + F EP + + YLH I+RD+K N+LID G I++ DFG
Sbjct: 131 SHLRRIG---RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 187
Query: 160 VSACMFDAGDRQRSRN-TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
+ R + R GTP ++APE++ GY+ D W+ G+ E+A G+ PF
Sbjct: 188 FAK-------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPF 239
Query: 219 SKYPPMKV 226
P+++
Sbjct: 240 FADQPIQI 247
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 92/188 (48%), Gaps = 15/188 (7%)
Query: 43 AIKVLDLEKCNN--DLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL 100
A+K+LD +K ++ E + ++ N P +++ SF L++VM Y+AGG
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 101 -HIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFG 159
H+ + F EP + + YLH I+RD+K N+LID G I++ DFG
Sbjct: 130 SHLRRIG---RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 160 VSACMFDAGDRQRSRN-TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
+ R + R GTP ++AP ++ GY+ D W+ G+ E+A G+ PF
Sbjct: 187 FAK-------RVKGRTWXLCGTPEYLAPAIILS-KGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 219 SKYPPMKV 226
P+++
Sbjct: 239 FADQPIQI 246
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 92/188 (48%), Gaps = 15/188 (7%)
Query: 43 AIKVLDLEKCNN--DLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL 100
A+K+LD +K ++ E + ++ N P +++ SF L++VM Y+ GG
Sbjct: 71 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMF 130
Query: 101 -HIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFG 159
H+ + F EP + + YLH I+RD+K N+LID G I++ DFG
Sbjct: 131 SHLRRIG---RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 187
Query: 160 VSACMFDAGDRQRSRN-TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
+ R + R GTP ++APE++ GY+ D W+ G+ E+A G+ PF
Sbjct: 188 FAK-------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPF 239
Query: 219 SKYPPMKV 226
P+++
Sbjct: 240 FADQPIQI 247
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 92/188 (48%), Gaps = 15/188 (7%)
Query: 43 AIKVLDLEKCNN--DLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL 100
A+K+LD +K ++ E + ++ N P +++ SF L++VM Y+ GG
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMF 129
Query: 101 -HIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFG 159
H+ + F EP + + YLH I+RD+K N+LID G I++ DFG
Sbjct: 130 SHLRRIG---RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 160 VSACMFDAGDRQRSRN-TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
+ R + R GTP ++APE++ GY+ D W+ G+ E+A G+ PF
Sbjct: 187 FAK-------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 219 SKYPPMKV 226
P+++
Sbjct: 239 FADQPIQI 246
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 92/188 (48%), Gaps = 15/188 (7%)
Query: 43 AIKVLDLEKCNN--DLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL 100
A+K+LD +K ++ E + ++ N P +++ SF L++VM Y+ GG
Sbjct: 63 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMF 122
Query: 101 -HIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFG 159
H+ + F EP + + YLH I+RD+K N+LID G I++ DFG
Sbjct: 123 SHLRRIG---RFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 179
Query: 160 VSACMFDAGDRQRSRN-TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
+ R + R GTP ++APE++ GY+ D W+ G+ E+A G+ PF
Sbjct: 180 FAK-------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPF 231
Query: 219 SKYPPMKV 226
P+++
Sbjct: 232 FADQPIQI 239
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 118/269 (43%), Gaps = 27/269 (10%)
Query: 13 AKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNND-------LDGIRREVQT 65
++ Y +G G V+ A+ N+ V +K + EK D L + E+
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAI 82
Query: 66 MRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
+ H N+++ F +VM G L +P +EP+ + + R+ +
Sbjct: 83 LSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPR-LDEPLASYIFRQLVS 141
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
A+ YL IHRD+K NI+I + IKL DFG +A + +R + TF GT + A
Sbjct: 142 AVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYL----ERGKLFYTFCGTIEYCA 197
Query: 186 PEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNA--PPGLDYERD 243
PEV+ + ++WS G+T L PF + L T++ A PP L
Sbjct: 198 PEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCE------LEETVEAAIHPPYL----- 246
Query: 244 KRFSKSFKELVTACLVKDPKKRPTAEKLM 272
SK LV+ L P++R T EKL+
Sbjct: 247 --VSKELMSLVSGLLQPVPERRTTLEKLV 273
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 92/188 (48%), Gaps = 15/188 (7%)
Query: 43 AIKVLDLEKCNN--DLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL 100
A+K+LD +K ++ E + ++ N P +++ SF L++VM Y+ GG
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMF 129
Query: 101 -HIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFG 159
H+ + F EP + + YLH I+RD+K N+LID G I++ DFG
Sbjct: 130 SHLRRIG---RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 160 VSACMFDAGDRQRSRN-TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
+ R + R GTP ++APE++ GY+ D W+ G+ E+A G+ PF
Sbjct: 187 FAK-------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 219 SKYPPMKV 226
P+++
Sbjct: 239 FADQPIQI 246
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 92/188 (48%), Gaps = 15/188 (7%)
Query: 43 AIKVLDLEKCNN--DLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL 100
A+K+LD +K ++ E + ++ N P +++ SF L++VM Y+ GG
Sbjct: 71 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMF 130
Query: 101 -HIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFG 159
H+ + F EP + + YLH I+RD+K N+LID G I++ DFG
Sbjct: 131 SHLRRIG---RFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 187
Query: 160 VSACMFDAGDRQRSRN-TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
+ R + R GTP ++APE++ GY+ D W+ G+ E+A G+ PF
Sbjct: 188 FAK-------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPF 239
Query: 219 SKYPPMKV 226
P+++
Sbjct: 240 FADQPIQI 247
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 92/188 (48%), Gaps = 15/188 (7%)
Query: 43 AIKVLDLEKCNN--DLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL 100
A+K+LD +K ++ E + ++ N P +++ SF L++VM Y+ GG
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMF 129
Query: 101 -HIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFG 159
H+ + F EP + + YLH I+RD+K N+LID G I++ DFG
Sbjct: 130 SHLRRIG---RFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 160 VSACMFDAGDRQRSRN-TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
+ R + R GTP ++APE++ GY+ D W+ G+ E+A G+ PF
Sbjct: 187 FAK-------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 219 SKYPPMKV 226
P+++
Sbjct: 239 FADQPIQI 246
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 120/270 (44%), Gaps = 18/270 (6%)
Query: 6 EKRFPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQT 65
E + V + +L E +G G V+ N + V L++ + D E
Sbjct: 11 EDEWEVPRETLKLVERLGAGQFGEVWMGY---YNGHTKVAVKSLKQGSMSPDAFLAEANL 67
Query: 66 MRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPV--IATLLRET 123
M+ H ++R + + T ++++ YM GS + +K+ P G + + + + +
Sbjct: 68 MKQLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQI 124
Query: 124 LKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPC- 182
+ + ++ +IHRD++A NIL+ + K+ADFG++ + D R F P
Sbjct: 125 AEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF---PIK 181
Query: 183 WMAPEVMQQLHGYDFKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLDYE 241
W APE + + K+D+WSFGI E+ HG P+ +V +QN G
Sbjct: 182 WTAPEAI-NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV----IQNLERGYRMV 236
Query: 242 RDKRFSKSFKELVTACLVKDPKKRPTAEKL 271
R + +L+ C + P+ RPT + L
Sbjct: 237 RPDNCPEELYQLMRLCWKERPEDRPTFDYL 266
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 133/291 (45%), Gaps = 40/291 (13%)
Query: 16 YRLYEEV-GEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTM-RVTNHPN 73
Y+L E+ GEG A V A+ + + A+K+++ ++ + + REV+T+ + + N
Sbjct: 14 YKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIE-KQAGHSRSRVFREVETLYQCQGNKN 72
Query: 74 VLRAHCSFTTGHCLWVVMPYMAGGSCL-HIMKSAYPEGFEEPVIATLLRETLKALVYLHF 132
+L F ++V + GGS L HI K + F E + ++R+ AL +LH
Sbjct: 73 ILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKH---FNEREASRVVRDVAAALDFLHT 129
Query: 133 HGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTF-------VGTPC--- 182
G HRD+K NIL +S + V C FD G + N+ + TPC
Sbjct: 130 KGIAHRDLKPENILCESPEKVS----PVKICDFDLGSGMKLNNSCTPITTPELTTPCGSA 185
Query: 183 -WMAPEVMQ----QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKV----------- 226
+MAPEV++ Q YD + D+WS G+ + G+ PF +
Sbjct: 186 EYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVC 245
Query: 227 ---LLMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKH 274
L ++Q + S K+L++ LV+D K+R +A ++++H
Sbjct: 246 QNKLFESIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQH 296
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 91/188 (48%), Gaps = 15/188 (7%)
Query: 43 AIKVLDLEKCNN--DLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL 100
A+K+LD +K ++ E + ++ N P +++ SF L++VM Y GG
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMF 129
Query: 101 -HIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFG 159
H+ + F EP + + YLH I+RD+K N++ID G IK+ DFG
Sbjct: 130 SHLRRIG---RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFG 186
Query: 160 VSACMFDAGDRQRSRN-TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
+ R + R GTP ++APE++ GY+ D W+ G+ E+A G+ PF
Sbjct: 187 FAK-------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 219 SKYPPMKV 226
P+++
Sbjct: 239 FADQPIQI 246
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 91/188 (48%), Gaps = 15/188 (7%)
Query: 43 AIKVLDLEKCNN--DLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL 100
A+K+LD +K ++ E + ++ N P +++ SF L++VM Y GG
Sbjct: 71 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMF 130
Query: 101 -HIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFG 159
H+ + F EP + + YLH I+RD+K N++ID G IK+ DFG
Sbjct: 131 SHLRRIG---RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFG 187
Query: 160 VSACMFDAGDRQRSRN-TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
+ R + R GTP ++APE++ GY+ D W+ G+ E+A G+ PF
Sbjct: 188 FA-------KRVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPF 239
Query: 219 SKYPPMKV 226
P+++
Sbjct: 240 FADQPIQI 247
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 92/188 (48%), Gaps = 15/188 (7%)
Query: 43 AIKVLDLEKCNN--DLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL 100
A+K+LD +K ++ E + ++ N P +++ SF L++VM Y+ GG
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMF 129
Query: 101 -HIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFG 159
H+ + F EP + + YLH I+RD+K N+LID G I++ DFG
Sbjct: 130 SHLRRIG---RFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 160 VSACMFDAGDRQRSRN-TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
+ R + R GTP ++APE++ GY+ D W+ G+ E+A G+ PF
Sbjct: 187 FAK-------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 219 SKYPPMKV 226
P+++
Sbjct: 239 FADQPIQI 246
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 124/285 (43%), Gaps = 50/285 (17%)
Query: 13 AKDYRLYEE-------VGEGVSATVYRALCI-PLNEIVAIKVLDLEKCNND--LDGIRRE 62
+DY + E +GEG V++ + + P N +A+ + + C +D + +E
Sbjct: 382 TRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQE 441
Query: 63 VQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGG---SCLHIMKSAYPEGFEEPVIATL 119
TMR +HP++++ T + +W++M G S L + K + +A+L
Sbjct: 442 ALTMRQFDHPHIVKL-IGVITENPVWIIMELCTLGELRSFLQVRKFSLD-------LASL 493
Query: 120 LRETLK---ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNT 176
+ + AL YL +HRD+ A N+L+ + +KL DFG+S M D+ + S+
Sbjct: 494 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGK 553
Query: 177 FVGTPC-WMAPEVMQQLHGYDFKADIWSFGITALE-LAHGHAPFSKYPPMKVL------- 227
P WMAPE + + +D+W FG+ E L HG PF V+
Sbjct: 554 L---PIKWMAPESI-NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE 609
Query: 228 -LMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKL 271
L N PP L L+T C DP +RP +L
Sbjct: 610 RLPMPPNCPPTL------------YSLMTKCWAYDPSRRPRFTEL 642
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 93/188 (49%), Gaps = 15/188 (7%)
Query: 43 AIKVLDLEKCNN--DLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL 100
A+K+LD +K +++ E + ++ N P +++ SF L++VM Y GG
Sbjct: 70 AMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMF 129
Query: 101 -HIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFG 159
H+ + F EP + + YLH I+RD+K N++ID G I++ DFG
Sbjct: 130 SHLRRIG---RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFG 186
Query: 160 VSACMFDAGDRQRSRN-TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
++ R + R GTP ++APE++ GY+ D W+ G+ E+A G+ PF
Sbjct: 187 LAK-------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 219 SKYPPMKV 226
P+++
Sbjct: 239 FADQPIQI 246
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 92/188 (48%), Gaps = 15/188 (7%)
Query: 43 AIKVLDLEKCNN--DLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL 100
A+K+LD +K ++ E + ++ N P +++ SF L++VM Y+ GG
Sbjct: 91 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMF 150
Query: 101 -HIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFG 159
H+ + F EP + + YLH I+RD+K N+LID G I++ DFG
Sbjct: 151 SHLRRIG---RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG 207
Query: 160 VSACMFDAGDRQRSRN-TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
+ R + R GTP ++APE++ GY+ D W+ G+ E+A G+ PF
Sbjct: 208 FA-------KRVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPF 259
Query: 219 SKYPPMKV 226
P+++
Sbjct: 260 FADQPIQI 267
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 120/270 (44%), Gaps = 18/270 (6%)
Query: 6 EKRFPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQT 65
E + V + +L E +G G V+ N + V L++ + D E
Sbjct: 14 EDEWEVPRETLKLVERLGAGQFGEVWMGY---YNGHTKVAVKSLKQGSMSPDAFLAEANL 70
Query: 66 MRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPV--IATLLRET 123
M+ H ++R + + T ++++ YM GS + +K+ P G + + + + +
Sbjct: 71 MKQLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQI 127
Query: 124 LKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPC- 182
+ + ++ +IHRD++A NIL+ + K+ADFG++ + D R F P
Sbjct: 128 AEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF---PIK 184
Query: 183 WMAPEVMQQLHGYDFKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLDYE 241
W APE + + K+D+WSFGI E+ HG P+ +V +QN G
Sbjct: 185 WTAPEAI-NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV----IQNLERGYRMV 239
Query: 242 RDKRFSKSFKELVTACLVKDPKKRPTAEKL 271
R + +L+ C + P+ RPT + L
Sbjct: 240 RPDNCPEELYQLMRLCWKERPEDRPTFDYL 269
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 91/188 (48%), Gaps = 15/188 (7%)
Query: 43 AIKVLDLEKCNN--DLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL 100
A+K+LD +K ++ E + ++ N P +++ SF L++VM Y GG
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMF 129
Query: 101 -HIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFG 159
H+ + F EP + + YLH I+RD+K N++ID G IK+ DFG
Sbjct: 130 SHLRRIG---RFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFG 186
Query: 160 VSACMFDAGDRQRSRN-TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
+ R + R GTP ++APE++ GY+ D W+ G+ E+A G+ PF
Sbjct: 187 FAK-------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 219 SKYPPMKV 226
P+++
Sbjct: 239 FADQPIQI 246
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 91/188 (48%), Gaps = 15/188 (7%)
Query: 43 AIKVLDLEKCNN--DLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL 100
A+K+LD +K ++ E + + N P +++ SF L++V+ Y GG
Sbjct: 71 AMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMF 130
Query: 101 -HIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFG 159
H+ + F EP + + YLH I+RD+K N+LID G IK+ADFG
Sbjct: 131 SHLRRIG---RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFG 187
Query: 160 VSACMFDAGDRQRSRN-TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
+ R + R GTP ++APE++ GY+ D W+ G+ E+A G+ PF
Sbjct: 188 FA-------KRVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPF 239
Query: 219 SKYPPMKV 226
P+++
Sbjct: 240 FADQPIQI 247
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 117/270 (43%), Gaps = 18/270 (6%)
Query: 11 VDAKDYRLYEEVGEGVSATV-YRALCIP--LNEIVAIKVLDLEKCNNDLDGIRREVQTMR 67
++A + + +G G S V Y L +P + VAIK L E M
Sbjct: 46 IEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMG 105
Query: 68 VTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKAL 127
+HPN++R T G +V YM GS +++ + F + +LR +
Sbjct: 106 QFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRT-HDGQFTIMQLVGMLRGVGAGM 164
Query: 128 VYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPE 187
YL G++HRD+ A N+L+DSN K++DFG+S + D D + W APE
Sbjct: 165 RYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPE 224
Query: 188 VMQQLHGYDFKADIWSFGITALE-LAHGHAPFSKYPPMKVLLMTLQN----APPGLDYER 242
+ + +D+WSFG+ E LA+G P+ V+ + AP G +
Sbjct: 225 AI-AFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGCPH-- 281
Query: 243 DKRFSKSFKELVTACLVKDPKKRPTAEKLM 272
+ +L+ C KD +RP +++
Sbjct: 282 ------ALHQLMLDCWHKDRAQRPRFSQIV 305
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 125/266 (46%), Gaps = 14/266 (5%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEK-CNNDLDG-IRREVQTMRVTNHP 72
+Y++ + +GEG V A + VA+K+++ + +D+ G I RE+ +R+ HP
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 68
Query: 73 NVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHF 132
++++ + + + +V+ Y +I++ + E ++ + A+ Y H
Sbjct: 69 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQR---DKMSEQEARRFFQQIISAVEYCHR 125
Query: 133 HGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQL 192
H +HRD+K N+L+D + +K+ADFG+S M D + S G+P + APEV+
Sbjct: 126 HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS----CGSPNYAAPEVISGK 181
Query: 193 HGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKE 252
+ D+WS G+ + PF + VL + N Y K S
Sbjct: 182 LYAGPEVDVWSCGVILYVMLCRRLPFDD-ESIPVLFKNISNGV----YTLPKFLSPGAAG 236
Query: 253 LVTACLVKDPKKRPTAEKLMKHHFFK 278
L+ L+ +P R + ++M+ +FK
Sbjct: 237 LIKRMLIVNPLNRISIHEIMQDDWFK 262
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 120/270 (44%), Gaps = 18/270 (6%)
Query: 6 EKRFPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQT 65
E + V + +L E +G G V+ N + V L++ + D E
Sbjct: 5 EDEWEVPRETLKLVERLGAGQFGEVWMGY---YNGHTKVAVKSLKQGSMSPDAFLAEANL 61
Query: 66 MRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPV--IATLLRET 123
M+ H ++R + + T ++++ YM GS + +K+ P G + + + + +
Sbjct: 62 MKQLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQI 118
Query: 124 LKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPC- 182
+ + ++ +IHRD++A NIL+ + K+ADFG++ + D R F P
Sbjct: 119 AEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF---PIK 175
Query: 183 WMAPEVMQQLHGYDFKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLDYE 241
W APE + + K+D+WSFGI E+ HG P+ +V +QN G
Sbjct: 176 WTAPEAI-NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV----IQNLERGYRMV 230
Query: 242 RDKRFSKSFKELVTACLVKDPKKRPTAEKL 271
R + +L+ C + P+ RPT + L
Sbjct: 231 RPDNCPEELYQLMRLCWKERPEDRPTFDYL 260
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 125/266 (46%), Gaps = 14/266 (5%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEK-CNNDLDG-IRREVQTMRVTNHP 72
+Y++ + +GEG V A + VA+K+++ + +D+ G I RE+ +R+ HP
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 64
Query: 73 NVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHF 132
++++ + + + +V+ Y +I++ + E ++ + A+ Y H
Sbjct: 65 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQR---DKMSEQEARRFFQQIISAVEYCHR 121
Query: 133 HGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQL 192
H +HRD+K N+L+D + +K+ADFG+S M D + S G+P + APEV+
Sbjct: 122 HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS----CGSPNYAAPEVISGK 177
Query: 193 HGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKE 252
+ D+WS G+ + PF + VL + N Y K S
Sbjct: 178 LYAGPEVDVWSCGVILYVMLCRRLPFDD-ESIPVLFKNISNGV----YTLPKFLSPGAAG 232
Query: 253 LVTACLVKDPKKRPTAEKLMKHHFFK 278
L+ L+ +P R + ++M+ +FK
Sbjct: 233 LIKRMLIVNPLNRISIHEIMQDDWFK 258
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 121/274 (44%), Gaps = 36/274 (13%)
Query: 8 RFPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMR 67
++ ++ D + ++G G VY + + VA+K L ++ +++ +E M+
Sbjct: 8 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMK 65
Query: 68 VTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKAL 127
HPN+++ T ++++ +M G+ L ++ + V+ + + A+
Sbjct: 66 EIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 125
Query: 128 VYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPE 187
YL IHRD+ A N L+ N +K+ADFG+S M GD + W APE
Sbjct: 126 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM--TGDTXTAHAGAKFPIKWTAPE 183
Query: 188 VMQQLHGYDFKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLD------- 239
+ + + K+D+W+FG+ E+A +G +P+ PG+D
Sbjct: 184 SL-AYNKFSIKSDVWAFGVLLWEIATYGMSPY-----------------PGIDLSQVYEL 225
Query: 240 YERDKRFSK------SFKELVTACLVKDPKKRPT 267
E+D R + EL+ AC +P RP+
Sbjct: 226 LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPS 259
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 121/274 (44%), Gaps = 36/274 (13%)
Query: 8 RFPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMR 67
++ ++ D + ++G G VY + + VA+K L ++ +++ +E M+
Sbjct: 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMK 64
Query: 68 VTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKAL 127
HPN+++ T ++++ +M G+ L ++ + V+ + + A+
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAM 124
Query: 128 VYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPE 187
YL IHRD+ A N L+ N +K+ADFG+S M GD + W APE
Sbjct: 125 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPE 182
Query: 188 VMQQLHGYDFKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLD------- 239
+ + + K+D+W+FG+ E+A +G +P+ PG+D
Sbjct: 183 SL-AYNKFSIKSDVWAFGVLLWEIATYGMSPY-----------------PGIDLSQVYEL 224
Query: 240 YERDKRFSK------SFKELVTACLVKDPKKRPT 267
E+D R + EL+ AC +P RP+
Sbjct: 225 LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPS 258
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 120/270 (44%), Gaps = 18/270 (6%)
Query: 6 EKRFPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQT 65
E + V + +L E +G G V+ N + V L++ + D E
Sbjct: 15 EDEWEVPRETLKLVERLGAGQFGEVWMGY---YNGHTKVAVKSLKQGSMSPDAFLAEANL 71
Query: 66 MRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPV--IATLLRET 123
M+ H ++R + + T ++++ YM GS + +K+ P G + + + + +
Sbjct: 72 MKQLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQI 128
Query: 124 LKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPC- 182
+ + ++ +IHRD++A NIL+ + K+ADFG++ + D R F P
Sbjct: 129 AEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF---PIK 185
Query: 183 WMAPEVMQQLHGYDFKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLDYE 241
W APE + + K+D+WSFGI E+ HG P+ +V +QN G
Sbjct: 186 WTAPEAI-NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV----IQNLERGYRMV 240
Query: 242 RDKRFSKSFKELVTACLVKDPKKRPTAEKL 271
R + +L+ C + P+ RPT + L
Sbjct: 241 RPDNCPEELYQLMRLCWKERPEDRPTFDYL 270
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 122/271 (45%), Gaps = 20/271 (7%)
Query: 6 EKRFPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQT 65
E + V + +L E +G G V+ N + V L++ + D E
Sbjct: 6 EDEWEVPRETLKLVERLGAGQFGEVWMGY---YNGHTKVAVKSLKQGSMSPDAFLAEANL 62
Query: 66 MRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPV--IATLLRET 123
M+ H ++R + + T ++++ YM GS + +K+ P G + + + + +
Sbjct: 63 MKQLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQI 119
Query: 124 LKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPC- 182
+ + ++ +IHRD++A NIL+ + K+ADFG++ + D R F P
Sbjct: 120 AEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF---PIK 176
Query: 183 WMAPEVMQQLHG-YDFKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLDY 240
W APE + +G + K+D+WSFGI E+ HG P+ +V +QN G
Sbjct: 177 WTAPEAIN--YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV----IQNLERGYRM 230
Query: 241 ERDKRFSKSFKELVTACLVKDPKKRPTAEKL 271
R + +L+ C + P+ RPT + L
Sbjct: 231 VRPDNCPEELYQLMRLCWKERPEDRPTFDYL 261
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 124/261 (47%), Gaps = 22/261 (8%)
Query: 17 RLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLR 76
+L +++G G V+ A N+ + V ++ + ++ E M+ H +++
Sbjct: 18 KLEKKLGAGQFGEVWMAT---YNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVK 74
Query: 77 AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPV--IATLLRETLKALVYLHFHG 134
H + T ++++ +MA GS L +KS EG ++P+ + + + + ++
Sbjct: 75 LH-AVVTKEPIYIITEFMAKGSLLDFLKSD--EGSKQPLPKLIDFSAQIAEGMAFIEQRN 131
Query: 135 HIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPC-WMAPEVMQQLH 193
+IHRD++A NIL+ ++ K+ADFG++ + D R F P W APE +
Sbjct: 132 YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKF---PIKWTAPEAI-NFG 187
Query: 194 GYDFKADIWSFGITALELA-HGHAPFSKYPPMK--VLLMTLQNAPPGLDYERDKRFSKSF 250
+ K+D+WSFGI +E+ +G P YP M ++ L+ G R + +
Sbjct: 188 SFTIKSDVWSFGILLMEIVTYGRIP---YPGMSNPEVIRALER---GYRMPRPENCPEEL 241
Query: 251 KELVTACLVKDPKKRPTAEKL 271
++ C P++RPT E +
Sbjct: 242 YNIMMRCWKNRPEERPTFEYI 262
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 129/293 (44%), Gaps = 38/293 (12%)
Query: 11 VDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKC------------------ 52
V Y L +E+G+G V A N A+KVL +K
Sbjct: 10 VQLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPA 69
Query: 53 -------NNDLDGIRREVQTMRVTNHPNVLRAHCSFTTGH--CLWVVMPYMAGGSCLHIM 103
++ + +E+ ++ +HPNV++ + L++V + G +M
Sbjct: 70 PGGCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGP---VM 126
Query: 104 KSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSAC 163
+ + E ++ +K + YLH+ IHRD+K N+L+ +G IK+ADFGVS
Sbjct: 127 EVPTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSN- 185
Query: 164 MFDAGDRQRSRNTFVGTPCWMAPEVMQQLHG-YDFKA-DIWSFGITALELAHGHAPFSKY 221
F D S NT VGTP +MAPE + + + KA D+W+ G+T G PF
Sbjct: 186 EFKGSDALLS-NT-VGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMD- 242
Query: 222 PPMKVLLMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKH 274
+++ + + L++ ++ K+L+T L K+P+ R ++ H
Sbjct: 243 --ERIMCLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLH 293
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 122/271 (45%), Gaps = 20/271 (7%)
Query: 6 EKRFPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQT 65
E + V + +L E +G G V+ N + V L++ + D E
Sbjct: 7 EDEWEVPRETLKLVERLGAGQFGEVWMGY---YNGHTKVAVKSLKQGSMSPDAFLAEANL 63
Query: 66 MRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPV--IATLLRET 123
M+ H ++R + + T ++++ YM GS + +K+ P G + + + + +
Sbjct: 64 MKQLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQI 120
Query: 124 LKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPC- 182
+ + ++ +IHRD++A NIL+ + K+ADFG++ + D R F P
Sbjct: 121 AEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF---PIK 177
Query: 183 WMAPEVMQQLHG-YDFKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLDY 240
W APE + +G + K+D+WSFGI E+ HG P+ +V +QN G
Sbjct: 178 WTAPEAIN--YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV----IQNLERGYRM 231
Query: 241 ERDKRFSKSFKELVTACLVKDPKKRPTAEKL 271
R + +L+ C + P+ RPT + L
Sbjct: 232 VRPDNCPEELYQLMRLCWKERPEDRPTFDYL 262
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 121/274 (44%), Gaps = 36/274 (13%)
Query: 8 RFPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMR 67
++ ++ D + ++G G VY + + VA+K L ++ +++ +E M+
Sbjct: 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMK 64
Query: 68 VTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKAL 127
HPN+++ T ++++ +M G+ L ++ + V+ + + A+
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAM 124
Query: 128 VYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPE 187
YL IHRD+ A N L+ N +K+ADFG+S M GD + W APE
Sbjct: 125 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPE 182
Query: 188 VMQQLHGYDFKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLD------- 239
+ + + K+D+W+FG+ E+A +G +P+ PG+D
Sbjct: 183 SL-AYNKFSIKSDVWAFGVLLWEIATYGMSPY-----------------PGIDLSQVYEL 224
Query: 240 YERDKRFSK------SFKELVTACLVKDPKKRPT 267
E+D R + EL+ AC +P RP+
Sbjct: 225 LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPS 258
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 129/288 (44%), Gaps = 25/288 (8%)
Query: 12 DAKDYRLYEEVGEGVSATVYRALCIPLN-EIVAIKVLDLEKCNNDLDGIRREVQTMRVTN 70
D+ Y +++G G + V R + L E+VA+K + E+ + ++RE+ R
Sbjct: 18 DSDRYDFVKDIGSG-NFGVARLMRDKLTKELVAVKYI--ERGAAIDENVQREIINHRSLR 74
Query: 71 HPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYL 130
HPN++R T L ++M Y +GG + +A F E ++ L + Y
Sbjct: 75 HPNIVRFKEVILTPTHLAIIMEYASGGELYERICNA--GRFSEDEARFFFQQLLSGVSYC 132
Query: 131 HFHGHIHRDVKAGNILIDSNGA--IKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEV 188
H HRD+K N L+D + A +K+ DFG S + + VGTP ++APEV
Sbjct: 133 HSMQICHRDLKLENTLLDGSPAPRLKICDFGYSK----SSVLHSQPKSTVGTPAYIAPEV 188
Query: 189 MQQLHGYDFK-ADIWSFGITALELAHGHAPFS------KYPPMKVLLMTLQNAPPGLDYE 241
+ + YD K AD+WS G+T + G PF Y +++++ + P
Sbjct: 189 LLR-QEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPD---- 243
Query: 242 RDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFKHARSNDFLARS 289
D R S L++ V DP R + ++ H +F D + S
Sbjct: 244 -DIRISPECCHLISRIFVADPATRISIPEIKTHSWFLKNLPADLMNES 290
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 117/270 (43%), Gaps = 18/270 (6%)
Query: 11 VDAKDYRLYEEVGEGVSATV-YRALCIP--LNEIVAIKVLDLEKCNNDLDGIRREVQTMR 67
++A + + +G G S V Y L +P + VAIK L E M
Sbjct: 46 IEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMG 105
Query: 68 VTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKAL 127
+HPN++R T G +V YM GS +++ + F + +LR +
Sbjct: 106 QFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRT-HDGQFTIMQLVGMLRGVGAGM 164
Query: 128 VYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPE 187
YL G++HRD+ A N+L+DSN K++DFG+S + D D + W APE
Sbjct: 165 RYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPE 224
Query: 188 VMQQLHGYDFKADIWSFGITALE-LAHGHAPFSKYPPMKVLLMTLQN----APPGLDYER 242
+ + +D+WSFG+ E LA+G P+ V+ + AP G +
Sbjct: 225 AI-AFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGCPH-- 281
Query: 243 DKRFSKSFKELVTACLVKDPKKRPTAEKLM 272
+ +L+ C KD +RP +++
Sbjct: 282 ------ALHQLMLDCWHKDRAQRPRFSQIV 305
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 122/271 (45%), Gaps = 20/271 (7%)
Query: 6 EKRFPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQT 65
E + V + +L E +G G V+ N + V L++ + D E
Sbjct: 5 EDEWEVPRETLKLVERLGAGQFGEVWMGY---YNGHTKVAVKSLKQGSMSPDAFLAEANL 61
Query: 66 MRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPV--IATLLRET 123
M+ H ++R + + T ++++ YM GS + +K+ P G + + + + +
Sbjct: 62 MKQLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQI 118
Query: 124 LKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPC- 182
+ + ++ +IHRD++A NIL+ + K+ADFG++ + D R F P
Sbjct: 119 AEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF---PIK 175
Query: 183 WMAPEVMQQLHG-YDFKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLDY 240
W APE + +G + K+D+WSFGI E+ HG P+ +V +QN G
Sbjct: 176 WTAPEAIN--YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV----IQNLERGYRM 229
Query: 241 ERDKRFSKSFKELVTACLVKDPKKRPTAEKL 271
R + +L+ C + P+ RPT + L
Sbjct: 230 VRPDNCPEELYQLMRLCWKERPEDRPTFDYL 260
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 122/271 (45%), Gaps = 20/271 (7%)
Query: 6 EKRFPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQT 65
E + V + +L E +G G V+ N + V L++ + D E
Sbjct: 10 EDEWEVPRETLKLVERLGAGQFGEVWMGY---YNGHTKVAVKSLKQGSMSPDAFLAEANL 66
Query: 66 MRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPV--IATLLRET 123
M+ H ++R + + T ++++ YM GS + +K+ P G + + + + +
Sbjct: 67 MKQLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQI 123
Query: 124 LKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPC- 182
+ + ++ +IHRD++A NIL+ + K+ADFG++ + D R F P
Sbjct: 124 AEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF---PIK 180
Query: 183 WMAPEVMQQLHG-YDFKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLDY 240
W APE + +G + K+D+WSFGI E+ HG P+ +V +QN G
Sbjct: 181 WTAPEAIN--YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV----IQNLERGYRM 234
Query: 241 ERDKRFSKSFKELVTACLVKDPKKRPTAEKL 271
R + +L+ C + P+ RPT + L
Sbjct: 235 VRPDNCPEELYQLMRLCWKERPEDRPTFDYL 265
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 122/271 (45%), Gaps = 20/271 (7%)
Query: 6 EKRFPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQT 65
E + V + +L E +G G V+ N + V L++ + D E
Sbjct: 11 EDEWEVPRETLKLVERLGAGQFGEVWMGY---YNGHTKVAVKSLKQGSMSPDAFLAEANL 67
Query: 66 MRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPV--IATLLRET 123
M+ H ++R + + T ++++ YM GS + +K+ P G + + + + +
Sbjct: 68 MKQLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQI 124
Query: 124 LKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPC- 182
+ + ++ +IHRD++A NIL+ + K+ADFG++ + D R F P
Sbjct: 125 AEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF---PIK 181
Query: 183 WMAPEVMQQLHG-YDFKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLDY 240
W APE + +G + K+D+WSFGI E+ HG P+ +V +QN G
Sbjct: 182 WTAPEAIN--YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV----IQNLERGYRM 235
Query: 241 ERDKRFSKSFKELVTACLVKDPKKRPTAEKL 271
R + +L+ C + P+ RPT + L
Sbjct: 236 VRPDNCPEELYQLMRLCWKERPEDRPTFDYL 266
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 123/266 (46%), Gaps = 18/266 (6%)
Query: 16 YRLYEEVGEGVSATVYRALCIPLNEIVAIKVLD---LEKCNNDLDGIRREVQTMRVTNHP 72
Y + E +GEG V A + VA+K + L+K + + + RE+ +++ HP
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMR-VEREISYLKLLRHP 69
Query: 73 NVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHF 132
++++ + TT + +V+ Y G +I++ + E ++ + A+ Y H
Sbjct: 70 HIIKLYDVITTPTDIVMVIEYAGGELFDYIVEK---KRMTEDEGRRFFQQIICAIEYCHR 126
Query: 133 HGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQL 192
H +HRD+K N+L+D N +K+ADFG+S M D + S G+P + APEV+
Sbjct: 127 HKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTS----CGSPNYAAPEVINGK 182
Query: 193 HGYDFKADIWSFGITALELAHGHAPF-SKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFK 251
+ D+WS GI + G PF ++ P L Y S +
Sbjct: 183 LYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIP------NLFKKVNSCVYVMPDFLSPGAQ 236
Query: 252 ELVTACLVKDPKKRPTAEKLMKHHFF 277
L+ +V DP +R T +++ + +F
Sbjct: 237 SLIRRMIVADPMQRITIQEIRRDPWF 262
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 127/280 (45%), Gaps = 27/280 (9%)
Query: 6 EKRFPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVL---DLEKCNNDLDGIRRE 62
+++F +D D+ + +G+G VY A I+A+KVL LEK + +RRE
Sbjct: 8 KRKFTID--DFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVE-HQLRRE 64
Query: 63 VQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEG-FEEPVIATLLR 121
++ HPN+LR + F +++++ + G + K G F+E AT +
Sbjct: 65 IEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGE---LYKELQKHGRFDEQRSATFME 121
Query: 122 ETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTP 181
E AL Y H IHRD+K N+L+ G +K+ADFG S R GT
Sbjct: 122 ELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL-----RRRXMCGTL 176
Query: 182 CWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTLQNAPPGL 238
++ PE+++ +D K D+W G+ E G PF S + ++ PP L
Sbjct: 177 DYLPPEMIEG-KTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFL 235
Query: 239 DYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFK 278
S K+L++ L P +R + +M+H + K
Sbjct: 236 --------SDGSKDLISKLLRYHPPQRLPLKGVMEHPWVK 267
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 134/267 (50%), Gaps = 22/267 (8%)
Query: 22 VGEGVSAT-VYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTN-HPNVLRAHC 79
+G G T VYR + N VA+K + L +C + D REVQ +R ++ HPNV+R C
Sbjct: 32 LGHGAEGTIVYRGMFD--NRDVAVKRI-LPECFSFAD---REVQLLRESDEHPNVIRYFC 85
Query: 80 SFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRD 139
+ ++ + A ++ + + EP+ TLL++T L +LH +HRD
Sbjct: 86 TEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPI--TLLQQTTSGLAHLHSLNIVHRD 143
Query: 140 VKAGNILI---DSNGAIK--LADFGVSACMFDAGDRQRSRNTFV-GTPCWMAPEVMQQ-- 191
+K NILI +++G IK ++DFG+ G SR + V GT W+APE++ +
Sbjct: 144 LKPHNILISMPNAHGKIKAMISDFGLCK-KLAVGRHSFSRRSGVPGTEGWIAPEMLSEDC 202
Query: 192 LHGYDFKADIWSFG-ITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSF 250
+ DI+S G + ++ G PF K + ++ + L E+ +
Sbjct: 203 KENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHEDVIA-- 260
Query: 251 KELVTACLVKDPKKRPTAEKLMKHHFF 277
+EL+ + DP+KRP+A+ ++KH FF
Sbjct: 261 RELIEKMIAMDPQKRPSAKHVLKHPFF 287
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 121/274 (44%), Gaps = 36/274 (13%)
Query: 8 RFPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMR 67
++ ++ D + ++G G VY + + VA+K L ++ +++ +E M+
Sbjct: 12 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMK 69
Query: 68 VTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKAL 127
HPN+++ T ++++ +M G+ L ++ + V+ + + A+
Sbjct: 70 EIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 129
Query: 128 VYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPE 187
YL IHRD+ A N L+ N +K+ADFG+S M GD + W APE
Sbjct: 130 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPE 187
Query: 188 VMQQLHGYDFKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLD------- 239
+ + + K+D+W+FG+ E+A +G +P+ PG+D
Sbjct: 188 SL-AYNKFSIKSDVWAFGVLLWEIATYGMSPY-----------------PGIDLSQVYEL 229
Query: 240 YERDKRFSK------SFKELVTACLVKDPKKRPT 267
E+D R + EL+ AC +P RP+
Sbjct: 230 LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPS 263
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 117/261 (44%), Gaps = 10/261 (3%)
Query: 8 RFPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMR 67
++ ++ D + ++G G VY + + VA+K L + +++ +E M+
Sbjct: 214 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMK 271
Query: 68 VTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKAL 127
HPN+++ T +++ +M G+ L ++ + V+ + + A+
Sbjct: 272 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAM 331
Query: 128 VYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPE 187
YL IHR++ A N L+ N +K+ADFG+S M GD + W APE
Sbjct: 332 EYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPE 389
Query: 188 VMQQLHGYDFKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRF 246
+ + + K+D+W+FG+ E+A +G +P+ P L + ER +
Sbjct: 390 SL-AYNKFSIKSDVWAFGVLLWEIATYGMSPY----PGIDLSQVYELLEKDYRMERPEGC 444
Query: 247 SKSFKELVTACLVKDPKKRPT 267
+ EL+ AC +P RP+
Sbjct: 445 PEKVYELMRACWQWNPSDRPS 465
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 90/188 (47%), Gaps = 15/188 (7%)
Query: 43 AIKVLDLEKCNN--DLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL 100
A+K+LD +K ++ E + ++ N P + + SF L++VM Y GG
Sbjct: 71 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMF 130
Query: 101 -HIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFG 159
H+ + F EP + + YLH I+RD+K N++ID G IK+ DFG
Sbjct: 131 SHLRRIG---RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFG 187
Query: 160 VSACMFDAGDRQRSRN-TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
+ R + R GTP ++APE++ GY+ D W+ G+ E+A G+ PF
Sbjct: 188 FAK-------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPF 239
Query: 219 SKYPPMKV 226
P+++
Sbjct: 240 FADQPIQI 247
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 120/274 (43%), Gaps = 36/274 (13%)
Query: 8 RFPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMR 67
++ ++ D + ++G G VY + + VA+K L ++ +++ +E M+
Sbjct: 20 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMK 77
Query: 68 VTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKAL 127
HPN+++ T +++ +M G+ L ++ + V+ + + A+
Sbjct: 78 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 137
Query: 128 VYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPE 187
YL IHRD+ A N L+ N +K+ADFG+S M GD + W APE
Sbjct: 138 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPE 195
Query: 188 VMQQLHGYDFKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLD------- 239
+ + + K+D+W+FG+ E+A +G +P+ PG+D
Sbjct: 196 SL-AYNKFSIKSDVWAFGVLLWEIATYGMSPY-----------------PGIDLSQVYEL 237
Query: 240 YERDKRFSK------SFKELVTACLVKDPKKRPT 267
E+D R + EL+ AC +P RP+
Sbjct: 238 LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPS 271
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 117/261 (44%), Gaps = 10/261 (3%)
Query: 8 RFPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMR 67
++ ++ D + ++G G VY + + VA+K L + +++ +E M+
Sbjct: 211 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMK 268
Query: 68 VTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKAL 127
HPN+++ T +++ +M G+ L ++ + V+ + + A+
Sbjct: 269 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 328
Query: 128 VYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPE 187
YL IHR++ A N L+ N +K+ADFG+S M GD + W APE
Sbjct: 329 EYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPE 386
Query: 188 VMQQLHGYDFKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRF 246
+ + + K+D+W+FG+ E+A +G +P+ P L + ER +
Sbjct: 387 SL-AYNKFSIKSDVWAFGVLLWEIATYGMSPY----PGIDLSQVYELLEKDYRMERPEGC 441
Query: 247 SKSFKELVTACLVKDPKKRPT 267
+ EL+ AC +P RP+
Sbjct: 442 PEKVYELMRACWQWNPSDRPS 462
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 90/188 (47%), Gaps = 15/188 (7%)
Query: 43 AIKVLDLEKCNN--DLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL 100
A+K+LD +K ++ E + ++ N P + + SF L++VM Y GG
Sbjct: 71 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMF 130
Query: 101 -HIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFG 159
H+ + F EP + + YLH I+RD+K N++ID G IK+ DFG
Sbjct: 131 SHLRRIG---RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFG 187
Query: 160 VSACMFDAGDRQRSRN-TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
+ R + R GTP ++APE++ GY+ D W+ G+ E+A G+ PF
Sbjct: 188 FAK-------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPF 239
Query: 219 SKYPPMKV 226
P+++
Sbjct: 240 FADQPIQI 247
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 120/274 (43%), Gaps = 36/274 (13%)
Query: 8 RFPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMR 67
++ ++ D + ++G G VY + + VA+K L ++ +++ +E M+
Sbjct: 12 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMK 69
Query: 68 VTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKAL 127
HPN+++ T +++ +M G+ L ++ + V+ + + A+
Sbjct: 70 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 129
Query: 128 VYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPE 187
YL IHRD+ A N L+ N +K+ADFG+S M GD + W APE
Sbjct: 130 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPE 187
Query: 188 VMQQLHGYDFKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLD------- 239
+ + + K+D+W+FG+ E+A +G +P+ PG+D
Sbjct: 188 SL-AYNKFSIKSDVWAFGVLLWEIATYGMSPY-----------------PGIDLSQVYEL 229
Query: 240 YERDKRFSK------SFKELVTACLVKDPKKRPT 267
E+D R + EL+ AC +P RP+
Sbjct: 230 LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPS 263
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 126/289 (43%), Gaps = 31/289 (10%)
Query: 7 KRFPVDAKDYRLYEEV-GEGVSATVYRALCIPLNEIVAIKVL-DLEKCNNDLDGIRREVQ 64
K++ V DY+L ++V G GV+ V + A+K+L D K ++D
Sbjct: 22 KKYAV-TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVD------H 74
Query: 65 TMRVTNHPNVLRAHCSFTTGH----CLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLL 120
+ + P+++ + H CL ++M M GG ++ + F E A ++
Sbjct: 75 HWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIM 134
Query: 121 RETLKALVYLHFHGHIHRDVKAGNILIDS---NGAIKLADFGVSACMFDAGDRQRSRNTF 177
R+ A+ +LH H HRDVK N+L S + +KL DFG F Q + T
Sbjct: 135 RDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFG-----FAKETTQNALQTP 189
Query: 178 VGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF------SKYPPMKVLLMTL 231
TP ++APEV+ YD D+WS G+ L G PF + P MK +
Sbjct: 190 CYTPYYVAPEVLGP-EKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLG 248
Query: 232 QNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFKHA 280
Q P ++ S+ K+L+ L DP +R T + M H + +
Sbjct: 249 QYGFPNPEW---SEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQS 294
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 90/188 (47%), Gaps = 15/188 (7%)
Query: 43 AIKVLDLEKCNN--DLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL 100
A+K+LD +K ++ E + ++ N P + + SF L++VM Y GG
Sbjct: 71 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMF 130
Query: 101 -HIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFG 159
H+ + F EP + + YLH I+RD+K N++ID G IK+ DFG
Sbjct: 131 SHLRRIG---RFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFG 187
Query: 160 VSACMFDAGDRQRSRN-TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
+ R + R GTP ++APE++ GY+ D W+ G+ E+A G+ PF
Sbjct: 188 FAK-------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPF 239
Query: 219 SKYPPMKV 226
P+++
Sbjct: 240 FADQPIQI 247
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 134/308 (43%), Gaps = 43/308 (13%)
Query: 8 RFPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMR 67
++ ++ D + ++G G VY + + VA+K L ++ +++ +E M+
Sbjct: 12 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMK 69
Query: 68 VTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKAL 127
HPN+++ T +++ +M G+ L ++ + V+ + + A+
Sbjct: 70 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAM 129
Query: 128 VYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPE 187
YL IHRD+ A N L+ N +K+ADFG+S M GD + W APE
Sbjct: 130 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPE 187
Query: 188 VMQQLHGYDFKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLD------- 239
+ + + K+D+W+FG+ E+A +G +P+ PG+D
Sbjct: 188 SL-AYNKFSIKSDVWAFGVLLWEIATYGMSPY-----------------PGIDLSQVYEL 229
Query: 240 YERDKRFSK------SFKELVTACLVKDPKKRPTAEKLMKHHFFKHARSNDFLARSIVDN 293
E+D R + EL+ AC +P RP+ ++ H F+ F SI D
Sbjct: 230 LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI--HQAFETM----FQESSISDE 283
Query: 294 L-APLGER 300
+ LG+R
Sbjct: 284 VEKELGKR 291
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 126/289 (43%), Gaps = 31/289 (10%)
Query: 7 KRFPVDAKDYRLYEEV-GEGVSATVYRALCIPLNEIVAIKVL-DLEKCNNDLDGIRREVQ 64
K++ V DY+L ++V G GV+ V + A+K+L D K ++D
Sbjct: 3 KKYAV-TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVD------H 55
Query: 65 TMRVTNHPNVLRAHCSFTTGH----CLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLL 120
+ + P+++ + H CL ++M M GG ++ + F E A ++
Sbjct: 56 HWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIM 115
Query: 121 RETLKALVYLHFHGHIHRDVKAGNILIDS---NGAIKLADFGVSACMFDAGDRQRSRNTF 177
R+ A+ +LH H HRDVK N+L S + +KL DFG F Q + T
Sbjct: 116 RDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFG-----FAKETTQNALQTP 170
Query: 178 VGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF------SKYPPMKVLLMTL 231
TP ++APEV+ YD D+WS G+ L G PF + P MK +
Sbjct: 171 CYTPYYVAPEVLGP-EKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLG 229
Query: 232 QNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFKHA 280
Q P ++ S+ K+L+ L DP +R T + M H + +
Sbjct: 230 QYGFPNPEW---SEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQS 275
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 117/261 (44%), Gaps = 10/261 (3%)
Query: 8 RFPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMR 67
++ ++ D + ++G G VY + + VA+K L + +++ +E M+
Sbjct: 253 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMK 310
Query: 68 VTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKAL 127
HPN+++ T +++ +M G+ L ++ + V+ + + A+
Sbjct: 311 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 370
Query: 128 VYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPE 187
YL IHR++ A N L+ N +K+ADFG+S M GD + W APE
Sbjct: 371 EYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPE 428
Query: 188 VMQQLHGYDFKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRF 246
+ + + K+D+W+FG+ E+A +G +P+ P L + ER +
Sbjct: 429 SL-AYNKFSIKSDVWAFGVLLWEIATYGMSPY----PGIDLSQVYELLEKDYRMERPEGC 483
Query: 247 SKSFKELVTACLVKDPKKRPT 267
+ EL+ AC +P RP+
Sbjct: 484 PEKVYELMRACWQWNPSDRPS 504
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 120/274 (43%), Gaps = 36/274 (13%)
Query: 8 RFPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMR 67
++ ++ D + ++G G VY + + VA+K L ++ +++ +E M+
Sbjct: 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMK 64
Query: 68 VTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKAL 127
HPN+++ T +++ +M G+ L ++ + V+ + + A+
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAM 124
Query: 128 VYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPE 187
YL IHRD+ A N L+ N +K+ADFG+S M GD + W APE
Sbjct: 125 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPE 182
Query: 188 VMQQLHGYDFKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLD------- 239
+ + + K+D+W+FG+ E+A +G +P+ PG+D
Sbjct: 183 SL-AYNKFSIKSDVWAFGVLLWEIATYGMSPY-----------------PGIDLSQVYEL 224
Query: 240 YERDKRFSK------SFKELVTACLVKDPKKRPT 267
E+D R + EL+ AC +P RP+
Sbjct: 225 LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPS 258
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 122/271 (45%), Gaps = 20/271 (7%)
Query: 6 EKRFPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQT 65
E + V + +L E +G G V+ N + V L++ + D E
Sbjct: 5 EDEWEVPRETLKLVERLGAGQFGEVWMGY---YNGHTKVAVKSLKQGSMSPDAFLAEANL 61
Query: 66 MRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPV--IATLLRET 123
M+ H ++R + + T ++++ YM GS + +K+ P G + + + + +
Sbjct: 62 MKQLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQI 118
Query: 124 LKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPC- 182
+ + ++ +IHRD++A NIL+ + K+ADFG++ + D R F P
Sbjct: 119 AEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF---PIK 175
Query: 183 WMAPEVMQQLHG-YDFKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLDY 240
W APE + +G + K+D+WSFGI E+ HG P+ +V +QN G
Sbjct: 176 WTAPEAIN--YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV----IQNLERGYRM 229
Query: 241 ERDKRFSKSFKELVTACLVKDPKKRPTAEKL 271
R + +L+ C + P+ RPT + L
Sbjct: 230 VRPDNCPEELYQLMRLCWKERPEDRPTFDYL 260
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 117/261 (44%), Gaps = 10/261 (3%)
Query: 8 RFPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMR 67
++ ++ D + ++G G VY + + VA+K L + +++ +E M+
Sbjct: 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED--TMEVEEFLKEAAVMK 64
Query: 68 VTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKAL 127
HPN+++ T +++ +M G+ L ++ + V+ + + A+
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAM 124
Query: 128 VYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPE 187
YL IHRD+ A N L+ N +K+ADFG+S M GD + W APE
Sbjct: 125 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPE 182
Query: 188 VMQQLHGYDFKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRF 246
+ + + K+D+W+FG+ E+A +G +P+ P L + ER +
Sbjct: 183 SL-AYNKFSIKSDVWAFGVLLWEIATYGMSPY----PGIDLSQVYELLEKDYRMERPEGC 237
Query: 247 SKSFKELVTACLVKDPKKRPT 267
+ EL+ AC +P RP+
Sbjct: 238 PEKVYELMRACWQWNPSDRPS 258
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 91/188 (48%), Gaps = 15/188 (7%)
Query: 43 AIKVLDLEKCNN--DLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL 100
A+K+LD +K ++ E + ++ N P +++ SF L++VM Y GG
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMF 129
Query: 101 -HIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFG 159
H+ + F EP + + YLH I+RD+K N++ID G I++ DFG
Sbjct: 130 SHLRRIG---RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFG 186
Query: 160 VSACMFDAGDRQRSRN-TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
+ R + R GTP ++APE++ GY+ D W+ G+ E+A G+ PF
Sbjct: 187 FAK-------RVKGRTWXLCGTPEYLAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 219 SKYPPMKV 226
P+++
Sbjct: 239 FADQPIQI 246
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 109/224 (48%), Gaps = 20/224 (8%)
Query: 59 IRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIAT 118
I REV +R HPN++ H + + +++ ++GG + A E E +
Sbjct: 62 IEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFL--AQKESLSEEEATS 119
Query: 119 LLRETLKALVYLHFHGHIHRDVKAGNI-LIDSNGA---IKLADFGVSACMFDAGDRQRSR 174
+++ L + YLH H D+K NI L+D N IKL DFG++ + D + +
Sbjct: 120 FIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE---FK 176
Query: 175 NTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNA 234
N F GTP ++APE++ +AD+WS G+ L G +PF + TL N
Sbjct: 177 NIF-GTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE----TLANI 230
Query: 235 PPGLDYERDKRF----SKSFKELVTACLVKDPKKRPTAEKLMKH 274
+ Y+ D+ F S+ K+ + LVK+ +KR T ++ ++H
Sbjct: 231 -TAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRH 273
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 121/270 (44%), Gaps = 31/270 (11%)
Query: 20 EEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNND-LDGIRREVQTMRVTNHPNVLRAH 78
E +G+G VY + VAI+++D+E+ N D L +REV R T H NV+
Sbjct: 39 ELIGKGRFGQVYHG---RWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVV--- 92
Query: 79 CSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIA------TLLRETLKALVYLHF 132
G C+ P++A + L ++ Y + ++ + +E +K + YLH
Sbjct: 93 --LFMGACM--SPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHA 148
Query: 133 HGHIHRDVKAGNILIDSNGAIKLADFGVSAC--MFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
G +H+D+K+ N+ D NG + + DFG+ + + AG R+ G C +APE+++
Sbjct: 149 KGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIR 207
Query: 191 QLH--------GYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYER 242
QL + +D+++ G EL PF P ++ P L
Sbjct: 208 QLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPNLS--- 264
Query: 243 DKRFSKSFKELVTACLVKDPKKRPTAEKLM 272
K +++ C + ++RPT KLM
Sbjct: 265 QIGMGKEISDILLFCWAFEQEERPTFTKLM 294
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 120/274 (43%), Gaps = 36/274 (13%)
Query: 8 RFPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMR 67
++ ++ D + ++G G VY + + VA+K L ++ +++ +E M+
Sbjct: 9 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMK 66
Query: 68 VTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKAL 127
HPN+++ T +++ +M G+ L ++ + V+ + + A+
Sbjct: 67 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 126
Query: 128 VYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPE 187
YL IHRD+ A N L+ N +K+ADFG+S M GD + W APE
Sbjct: 127 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPE 184
Query: 188 VMQQLHGYDFKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLD------- 239
+ + + K+D+W+FG+ E+A +G +P+ PG+D
Sbjct: 185 SL-AYNKFSIKSDVWAFGVLLWEIATYGMSPY-----------------PGIDLSQVYEL 226
Query: 240 YERDKRFSK------SFKELVTACLVKDPKKRPT 267
E+D R + EL+ AC +P RP+
Sbjct: 227 LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPS 260
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 120/274 (43%), Gaps = 36/274 (13%)
Query: 8 RFPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMR 67
++ ++ D + ++G G VY + + VA+K L ++ +++ +E M+
Sbjct: 9 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMK 66
Query: 68 VTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKAL 127
HPN+++ T +++ +M G+ L ++ + V+ + + A+
Sbjct: 67 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 126
Query: 128 VYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPE 187
YL IHRD+ A N L+ N +K+ADFG+S M GD + W APE
Sbjct: 127 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPE 184
Query: 188 VMQQLHGYDFKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLD------- 239
+ + + K+D+W+FG+ E+A +G +P+ PG+D
Sbjct: 185 SL-AYNKFSIKSDVWAFGVLLWEIATYGMSPY-----------------PGIDLSQVYEL 226
Query: 240 YERDKRFSK------SFKELVTACLVKDPKKRPT 267
E+D R + EL+ AC +P RP+
Sbjct: 227 LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPS 260
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 108/251 (43%), Gaps = 46/251 (18%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNN----DLDGIRREVQTMRVT 69
K Y L +G+G V A+ I AIK+++ K D++ I+ EV+ M+
Sbjct: 26 KKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKL 85
Query: 70 NHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLH----------------IMKSAY---PEG 110
+HPN+ R + + + +VM GG L ++K+ PE
Sbjct: 86 HHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPEC 145
Query: 111 FEEPV-------------------IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNG 151
EE + I+ ++R+ AL YLH G HRD+K N L +N
Sbjct: 146 NEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNK 205
Query: 152 A--IKLADFGVSACMFDAGDRQ-RSRNTFVGTPCWMAPEVMQQLH-GYDFKADIWSFGIT 207
+ IKL DFG+S + + + T GTP ++APEV+ + Y K D WS G+
Sbjct: 206 SFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVL 265
Query: 208 ALELAHGHAPF 218
L G PF
Sbjct: 266 LHLLLMGAVPF 276
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 127/280 (45%), Gaps = 27/280 (9%)
Query: 6 EKRFPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVL---DLEKCNNDLDGIRRE 62
+++F +D D+ + +G+G VY A I+A+KVL LEK + +RRE
Sbjct: 9 KRKFTID--DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVE-HQLRRE 65
Query: 63 VQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEG-FEEPVIATLLR 121
++ HPN+LR + F +++++ + G + K G F+E AT +
Sbjct: 66 IEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGE---LYKELQKHGRFDEQRSATFME 122
Query: 122 ETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTP 181
E AL Y H IHRD+K N+L+ G +K+ADFG S R GT
Sbjct: 123 ELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL-----RRRXMCGTL 177
Query: 182 CWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTLQNAPPGL 238
++ PE+++ +D K D+W G+ E G PF S + ++ PP L
Sbjct: 178 DYLPPEMIEG-KTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFL 236
Query: 239 DYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFK 278
S K+L++ L P +R + +M+H + K
Sbjct: 237 --------SDGSKDLISKLLRYHPPQRLPLKGVMEHPWVK 268
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 127/280 (45%), Gaps = 27/280 (9%)
Query: 6 EKRFPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVL---DLEKCNNDLDGIRRE 62
+++F +D D+ + +G+G VY A I+A+KVL LEK + +RRE
Sbjct: 8 KRKFTID--DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVE-HQLRRE 64
Query: 63 VQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEG-FEEPVIATLLR 121
++ HPN+LR + F +++++ + G + K G F+E AT +
Sbjct: 65 IEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGE---LYKELQKHGRFDEQRSATFME 121
Query: 122 ETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTP 181
E AL Y H IHRD+K N+L+ G +K+ADFG S R GT
Sbjct: 122 ELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL-----RRRXMCGTL 176
Query: 182 CWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTLQNAPPGL 238
++ PE+++ +D K D+W G+ E G PF S + ++ PP L
Sbjct: 177 DYLPPEMIEG-KTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFL 235
Query: 239 DYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFK 278
S K+L++ L P +R + +M+H + K
Sbjct: 236 --------SDGSKDLISKLLRYHPPQRLPLKGVMEHPWVK 267
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 128/290 (44%), Gaps = 31/290 (10%)
Query: 3 LVVEKRFPVDAKDYRLYEEV-GEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRR 61
L ++K +D DY++ +V G G++ V + E A+K+L D RR
Sbjct: 52 LQIKKNAIID--DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML------QDCPKARR 103
Query: 62 EVQT-MRVTNHPNVLR---AHCSFTTGH-CLWVVMPYMAGGSCLHIMKSAYPEGFEEPVI 116
EV+ R + P+++R + + G CL +VM + GG ++ + F E
Sbjct: 104 EVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREA 163
Query: 117 ATLLRETLKALVYLHFHGHIHRDVKAGNILIDS---NGAIKLADFGVSACMFDAGDRQRS 173
+ +++ +A+ YLH HRDVK N+L S N +KL DFG + S
Sbjct: 164 SEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA----KETTSHNS 219
Query: 174 RNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF------SKYPPMKVL 227
T TP ++APEV+ YD D+WS G+ L G+ PF + P MK
Sbjct: 220 LTTPCYTPYYVAPEVLGP-EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 278
Query: 228 LMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFF 277
+ Q P ++ S+ K L+ L +P +R T + M H +
Sbjct: 279 IRMGQYEFPNPEWS---EVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 325
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 120/274 (43%), Gaps = 36/274 (13%)
Query: 8 RFPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMR 67
++ ++ D + ++G G VY + + VA+K L ++ +++ +E M+
Sbjct: 12 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMK 69
Query: 68 VTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKAL 127
HPN+++ T +++ +M G+ L ++ + V+ + + A+
Sbjct: 70 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 129
Query: 128 VYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPE 187
YL IHRD+ A N L+ N +K+ADFG+S M GD + W APE
Sbjct: 130 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM--TGDTXTAHAGAKFPIKWTAPE 187
Query: 188 VMQQLHGYDFKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLD------- 239
+ + + K+D+W+FG+ E+A +G +P+ PG+D
Sbjct: 188 SL-AYNKFSIKSDVWAFGVLLWEIATYGMSPY-----------------PGIDLSQVYEL 229
Query: 240 YERDKRFSK------SFKELVTACLVKDPKKRPT 267
E+D R + EL+ AC +P RP+
Sbjct: 230 LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPS 263
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 115/258 (44%), Gaps = 35/258 (13%)
Query: 31 YRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVV 90
Y A+ I E++ K +++ E + ++ + HP + SF T L V
Sbjct: 35 YYAMKILKKEVIVAK--------DEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 86
Query: 91 MPYMAGGSCL-HIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHI-HRDVKAGNILID 148
M Y GG H+ + F E E + AL YLH ++ +RD+K N+++D
Sbjct: 87 MEYANGGELFFHLSRERV---FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLD 143
Query: 149 SNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITA 208
+G IK+ DFG+ G + F GTP ++APEV++ + Y D W G+
Sbjct: 144 KDGHIKITDFGLCKEGIKDG---ATMKXFCGTPEYLAPEVLED-NDYGRAVDWWGLGVVM 199
Query: 209 LELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSF----KELVTACLVKDPKK 264
E+ G PF K+ + L + RF ++ K L++ L KDPK+
Sbjct: 200 YEMMCGRLPFYNQDHEKLFELILME---------EIRFPRTLGPEAKSLLSGLLKKDPKQ 250
Query: 265 R-----PTAEKLMKHHFF 277
R A+++M+H FF
Sbjct: 251 RLGGGSEDAKEIMQHRFF 268
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 123/269 (45%), Gaps = 23/269 (8%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPN 73
K + E +G G + V+ ++ A+K + D + E+ ++ H N
Sbjct: 9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRD-SSLENEIAVLKKIKHEN 67
Query: 74 VLRAHCSFTTGHCLWVVMPYMAGGSCL-HIMKSAYPEGFEEPVIATLLRETLKALVYLHF 132
++ + + ++VM ++GG I++ + E + ++++ L A+ YLH
Sbjct: 68 IVTLEDIYESTTHYYLVMQLVSGGELFDRILERGV---YTEKDASLVIQQVLSAVKYLHE 124
Query: 133 HGHIHRDVKAGNILI---DSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVM 189
+G +HRD+K N+L + N I + DFG+S ++ +T GTP ++APEV+
Sbjct: 125 NGIVHRDLKPENLLYLTPEENSKIMITDFGLSKM-----EQNGIMSTACGTPGYVAPEVL 179
Query: 190 QQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRF--- 246
Q Y D WS G+ L G+ PF + K+ + G YE + F
Sbjct: 180 AQ-KPYSKAVDCWSIGVITYILLCGYPPFYEETESKL----FEKIKEGY-YEFESPFWDD 233
Query: 247 -SKSFKELVTACLVKDPKKRPTAEKLMKH 274
S+S K+ + L KDP +R T EK + H
Sbjct: 234 ISESAKDFICHLLEKDPNERYTCEKALSH 262
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 115/258 (44%), Gaps = 35/258 (13%)
Query: 31 YRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVV 90
Y A+ I E++ K +++ E + ++ + HP + SF T L V
Sbjct: 37 YYAMKILKKEVIVAK--------DEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 88
Query: 91 MPYMAGGSCL-HIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHI-HRDVKAGNILID 148
M Y GG H+ + F E E + AL YLH ++ +RD+K N+++D
Sbjct: 89 MEYANGGELFFHLSRERV---FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLD 145
Query: 149 SNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITA 208
+G IK+ DFG+ G + F GTP ++APEV++ + Y D W G+
Sbjct: 146 KDGHIKITDFGLCKEGIKDG---ATMKXFCGTPEYLAPEVLED-NDYGRAVDWWGLGVVM 201
Query: 209 LELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSF----KELVTACLVKDPKK 264
E+ G PF K+ + L + RF ++ K L++ L KDPK+
Sbjct: 202 YEMMCGRLPFYNQDHEKLFELILME---------EIRFPRTLGPEAKSLLSGLLKKDPKQ 252
Query: 265 R-----PTAEKLMKHHFF 277
R A+++M+H FF
Sbjct: 253 RLGGGSEDAKEIMQHRFF 270
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 115/258 (44%), Gaps = 35/258 (13%)
Query: 31 YRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVV 90
Y A+ I E++ K +++ E + ++ + HP + SF T L V
Sbjct: 36 YYAMKILKKEVIVAK--------DEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 87
Query: 91 MPYMAGGSCL-HIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHI-HRDVKAGNILID 148
M Y GG H+ + F E E + AL YLH ++ +RD+K N+++D
Sbjct: 88 MEYANGGELFFHLSRERV---FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLD 144
Query: 149 SNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITA 208
+G IK+ DFG+ G + F GTP ++APEV++ + Y D W G+
Sbjct: 145 KDGHIKITDFGLCKEGIKDG---ATMKXFCGTPEYLAPEVLED-NDYGRAVDWWGLGVVM 200
Query: 209 LELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSF----KELVTACLVKDPKK 264
E+ G PF K+ + L + RF ++ K L++ L KDPK+
Sbjct: 201 YEMMCGRLPFYNQDHEKLFELILME---------EIRFPRTLGPEAKSLLSGLLKKDPKQ 251
Query: 265 R-----PTAEKLMKHHFF 277
R A+++M+H FF
Sbjct: 252 RLGGGSEDAKEIMQHRFF 269
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 116/261 (44%), Gaps = 10/261 (3%)
Query: 8 RFPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMR 67
++ ++ D + ++G G VY + + VA+K L ++ +++ +E M+
Sbjct: 26 KWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMK 83
Query: 68 VTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKAL 127
HPN+++ T ++V YM G+ L ++ E V+ + + A+
Sbjct: 84 EIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAM 143
Query: 128 VYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPE 187
YL IHRD+ A N L+ N +K+ADFG+S M GD + W APE
Sbjct: 144 EYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPE 201
Query: 188 VMQQLHGYDFKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRF 246
+ + + K+D+W+FG+ E+A +G +P+ P L G E+ +
Sbjct: 202 SL-AYNTFSIKSDVWAFGVLLWEIATYGMSPY----PGIDLSQVYDLLEKGYRMEQPEGC 256
Query: 247 SKSFKELVTACLVKDPKKRPT 267
EL+ AC P RP+
Sbjct: 257 PPKVYELMRACWKWSPADRPS 277
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 128/290 (44%), Gaps = 31/290 (10%)
Query: 3 LVVEKRFPVDAKDYRLYEEV-GEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRR 61
L ++K +D DY++ +V G G++ V + E A+K+L D RR
Sbjct: 58 LQIKKNAIID--DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML------QDCPKARR 109
Query: 62 EVQT-MRVTNHPNVLR---AHCSFTTGH-CLWVVMPYMAGGSCLHIMKSAYPEGFEEPVI 116
EV+ R + P+++R + + G CL +VM + GG ++ + F E
Sbjct: 110 EVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREA 169
Query: 117 ATLLRETLKALVYLHFHGHIHRDVKAGNILIDS---NGAIKLADFGVSACMFDAGDRQRS 173
+ +++ +A+ YLH HRDVK N+L S N +KL DFG + S
Sbjct: 170 SEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA----KETTSHNS 225
Query: 174 RNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF------SKYPPMKVL 227
T TP ++APEV+ YD D+WS G+ L G+ PF + P MK
Sbjct: 226 LTTPCYTPYYVAPEVLGP-EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 284
Query: 228 LMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFF 277
+ Q P ++ S+ K L+ L +P +R T + M H +
Sbjct: 285 IRMGQYEFPNPEWS---EVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 331
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 125/273 (45%), Gaps = 32/273 (11%)
Query: 7 KRFPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTM 66
+ + +D KD + +GEG + + + N+ A+K++ N ++E+ +
Sbjct: 8 QHYDLDLKD----KPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEAN----TQKEITAL 59
Query: 67 RVT-NHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
++ HPN+++ H F ++VM + GG +K + F E + ++R+ +
Sbjct: 60 KLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKK--KHFSETEASYIMRKLVS 117
Query: 126 ALVYLHFHGHIHRDVKAGNILI---DSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPC 182
A+ ++H G +HRD+K N+L + N IK+ DFG + + N + TPC
Sbjct: 118 AVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARL-------KPPDNQPLKTPC 170
Query: 183 ----WMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKY------PPMKVLLMTLQ 232
+ APE++ Q +GYD D+WS G+ + G PF + ++ ++
Sbjct: 171 FTLHYAAPELLNQ-NGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIK 229
Query: 233 NAPPGLDYERDKRFSKSFKELVTACLVKDPKKR 265
+ E K S+ K+L+ L DP KR
Sbjct: 230 KGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKR 262
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 120/274 (43%), Gaps = 36/274 (13%)
Query: 8 RFPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMR 67
++ ++ D + ++G G VY + + VA+K L ++ +++ +E M+
Sbjct: 8 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMK 65
Query: 68 VTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKAL 127
HPN+++ T +++ +M G+ L ++ + V+ + + A+
Sbjct: 66 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 125
Query: 128 VYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPE 187
YL IHRD+ A N L+ N +K+ADFG+S M GD + W APE
Sbjct: 126 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAPAGAKFPIKWTAPE 183
Query: 188 VMQQLHGYDFKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLD------- 239
+ + + K+D+W+FG+ E+A +G +P+ PG+D
Sbjct: 184 SL-AYNKFSIKSDVWAFGVLLWEIATYGMSPY-----------------PGIDLSQVYEL 225
Query: 240 YERDKRFSK------SFKELVTACLVKDPKKRPT 267
E+D R + EL+ AC +P RP+
Sbjct: 226 LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPS 259
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 120/274 (43%), Gaps = 36/274 (13%)
Query: 8 RFPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMR 67
++ ++ D + ++G G VY + + VA+K L ++ +++ +E M+
Sbjct: 12 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMK 69
Query: 68 VTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKAL 127
HPN+++ T +++ +M G+ L ++ + V+ + + A+
Sbjct: 70 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 129
Query: 128 VYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPE 187
YL IHRD+ A N L+ N +K+ADFG+S M GD + W APE
Sbjct: 130 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPE 187
Query: 188 VMQQLHGYDFKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLD------- 239
+ + + K+D+W+FG+ E+A +G +P+ PG+D
Sbjct: 188 SL-AYNKFSIKSDVWAFGVLLWEIATYGMSPY-----------------PGIDLSQVYEL 229
Query: 240 YERDKRFSK------SFKELVTACLVKDPKKRPT 267
E+D R + EL+ AC +P RP+
Sbjct: 230 LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPS 263
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 119/274 (43%), Gaps = 36/274 (13%)
Query: 8 RFPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMR 67
++ ++ D + ++G G VY + + VA+K L + +++ +E M+
Sbjct: 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED--TMEVEEFLKEAAVMK 64
Query: 68 VTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKAL 127
HPN+++ T +++ +M G+ L ++ + V+ + + A+
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 124
Query: 128 VYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPE 187
YL IHRD+ A N L+ N +K+ADFG+S M GD + W APE
Sbjct: 125 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPE 182
Query: 188 VMQQLHGYDFKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLD------- 239
+ + + K+D+W+FG+ E+A +G +P+ PG+D
Sbjct: 183 SL-AYNKFSIKSDVWAFGVLLWEIATYGMSPY-----------------PGIDLSQVYEL 224
Query: 240 YERDKRFSK------SFKELVTACLVKDPKKRPT 267
E+D R + EL+ AC +P RP+
Sbjct: 225 LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPS 258
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 121/268 (45%), Gaps = 20/268 (7%)
Query: 9 FPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRV 68
+ V + +L E +G G V+ N + V L++ + D E M+
Sbjct: 3 WEVPRETLKLVERLGAGQFGEVWMGY---YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQ 59
Query: 69 TNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPV--IATLLRETLKA 126
H ++R + + T ++++ YM GS + +K+ P G + + + + + +
Sbjct: 60 LQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEG 116
Query: 127 LVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPC-WMA 185
+ ++ +IHRD++A NIL+ + K+ADFG++ + D R F P W A
Sbjct: 117 MAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF---PIKWTA 173
Query: 186 PEVMQQLHG-YDFKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLDYERD 243
PE + +G + K+D+WSFGI E+ HG P+ +V +QN G R
Sbjct: 174 PEAIN--YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV----IQNLERGYRMVRP 227
Query: 244 KRFSKSFKELVTACLVKDPKKRPTAEKL 271
+ +L+ C + P+ RPT + L
Sbjct: 228 DNCPEELYQLMRLCWKERPEDRPTFDYL 255
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 120/274 (43%), Gaps = 36/274 (13%)
Query: 8 RFPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMR 67
++ ++ D + ++G G VY + + VA+K L ++ +++ +E M+
Sbjct: 11 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMK 68
Query: 68 VTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKAL 127
HPN+++ T +++ +M G+ L ++ + V+ + + A+
Sbjct: 69 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 128
Query: 128 VYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPE 187
YL IHRD+ A N L+ N +K+ADFG+S M GD + W APE
Sbjct: 129 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPE 186
Query: 188 VMQQLHGYDFKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLD------- 239
+ + + K+D+W+FG+ E+A +G +P+ PG+D
Sbjct: 187 SL-AYNKFSIKSDVWAFGVLLWEIATYGMSPY-----------------PGIDLSQVYEL 228
Query: 240 YERDKRFSK------SFKELVTACLVKDPKKRPT 267
E+D R + EL+ AC +P RP+
Sbjct: 229 LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPS 262
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 130/292 (44%), Gaps = 39/292 (13%)
Query: 4 VVEKRFPVDAKDYRLYEEVGEGVSATVYRALCIPLN----EIVAIKVLDLEKCNNDLDGI 59
V KR+ +D +GEG V P N E+VA+K L + G
Sbjct: 10 VFHKRYLKKIRD------LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGW 63
Query: 60 RREVQTMRVTNHPNVLR--AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIA 117
++E+ +R H ++++ C L +VM Y+ GS ++ P +A
Sbjct: 64 KQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGS----LRDYLPR--HSIGLA 117
Query: 118 TLL---RETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSR 174
LL ++ + + YLH +IHR++ A N+L+D++ +K+ DFG++ + + + R R
Sbjct: 118 QLLLFAQQICEGMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVR 177
Query: 175 NTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVL------- 227
W APE +++ Y + +D+WSFG+T EL H S+ PP K L
Sbjct: 178 EDGDSPVFWYAPECLKEYKFY-YASDVWSFGVTLYELL-THCDSSQSPPTKFLELIGIAQ 235
Query: 228 -LMTLQNAPPGLDYERDKRFSKSFK------ELVTACLVKDPKKRPTAEKLM 272
MT+ L ER +R + K L+ C + RPT E L+
Sbjct: 236 GQMTVLRLTELL--ERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLI 285
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 120/274 (43%), Gaps = 36/274 (13%)
Query: 8 RFPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMR 67
++ ++ D + ++G G VY + + VA+K L ++ +++ +E M+
Sbjct: 9 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMK 66
Query: 68 VTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKAL 127
HPN+++ T +++ +M G+ L ++ + V+ + + A+
Sbjct: 67 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 126
Query: 128 VYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPE 187
YL IHRD+ A N L+ N +K+ADFG+S M GD + W APE
Sbjct: 127 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAPAGAKFPIKWTAPE 184
Query: 188 VMQQLHGYDFKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLD------- 239
+ + + K+D+W+FG+ E+A +G +P+ PG+D
Sbjct: 185 SL-AYNKFSIKSDVWAFGVLLWEIATYGMSPY-----------------PGIDLSQVYEL 226
Query: 240 YERDKRFSK------SFKELVTACLVKDPKKRPT 267
E+D R + EL+ AC +P RP+
Sbjct: 227 LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPS 260
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 130/292 (44%), Gaps = 39/292 (13%)
Query: 4 VVEKRFPVDAKDYRLYEEVGEGVSATVYRALCIPLN----EIVAIKVLDLEKCNNDLDGI 59
V KR+ +D +GEG V P N E+VA+K L + G
Sbjct: 10 VFHKRYLKKIRD------LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGW 63
Query: 60 RREVQTMRVTNHPNVLR--AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIA 117
++E+ +R H ++++ C L +VM Y+ GS ++ P +A
Sbjct: 64 KQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGS----LRDYLPR--HSIGLA 117
Query: 118 TLL---RETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSR 174
LL ++ + + YLH +IHR++ A N+L+D++ +K+ DFG++ + + + R R
Sbjct: 118 QLLLFAQQICEGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVR 177
Query: 175 NTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVL------- 227
W APE +++ Y + +D+WSFG+T EL H S+ PP K L
Sbjct: 178 EDGDSPVFWYAPECLKEYKFY-YASDVWSFGVTLYELL-THCDSSQSPPTKFLELIGIAQ 235
Query: 228 -LMTLQNAPPGLDYERDKRFSKSFK------ELVTACLVKDPKKRPTAEKLM 272
MT+ L ER +R + K L+ C + RPT E L+
Sbjct: 236 GQMTVLRLTELL--ERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLI 285
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 123/284 (43%), Gaps = 48/284 (16%)
Query: 13 AKDYRLYEE-------VGEGVSATVYRALCI-PLNEIVAIKVLDLEKCNND--LDGIRRE 62
+DY + E +GEG V++ + + P N +A+ + + C +D + +E
Sbjct: 2 TRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQE 61
Query: 63 VQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGG---SCLHIMKSAYPEGFEEPVIATL 119
TMR +HP++++ T + +W++M G S L + K + +A+L
Sbjct: 62 ALTMRQFDHPHIVKL-IGVITENPVWIIMELCTLGELRSFLQVRKFSLD-------LASL 113
Query: 120 LRETLK---ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNT 176
+ + AL YL +HRD+ A N+L+ + +KL DFG+S M D+ + S+
Sbjct: 114 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGK 173
Query: 177 FVGTPCWMAPEVMQQLHGYDFKADIWSFGITALE-LAHGHAPFSKYPPMKVL-------- 227
WMAPE + + +D+W FG+ E L HG PF V+
Sbjct: 174 LPIK--WMAPESI-NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGER 230
Query: 228 LMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKL 271
L N PP L L+T C DP +RP +L
Sbjct: 231 LPMPPNCPPTL------------YSLMTKCWAYDPSRRPRFTEL 262
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 129/293 (44%), Gaps = 31/293 (10%)
Query: 3 LVVEKRFPVDAKDYRLYEEV-GEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRR 61
L ++K +D DY++ +V G G++ V + E A+K+L D RR
Sbjct: 22 LQIKKNAIID--DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML------QDCPKARR 73
Query: 62 EVQT-MRVTNHPNVLR---AHCSFTTGH-CLWVVMPYMAGGSCLHIMKSAYPEGFEEPVI 116
EV+ R + P+++R + + G CL +VM + GG ++ + F E
Sbjct: 74 EVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREA 133
Query: 117 ATLLRETLKALVYLHFHGHIHRDVKAGNILIDS---NGAIKLADFGVSACMFDAGDRQRS 173
+ +++ +A+ YLH HRDVK N+L S N +KL DFG + S
Sbjct: 134 SEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA----KETTSHNS 189
Query: 174 RNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF------SKYPPMKVL 227
T TP ++APEV+ YD D+WS G+ L G+ PF + P MK
Sbjct: 190 LTTPCYTPYYVAPEVLGP-EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 248
Query: 228 LMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFKHA 280
+ Q P ++ S+ K L+ L +P +R T + M H + +
Sbjct: 249 IRMGQYEFPNPEWS---EVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 298
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 129/293 (44%), Gaps = 31/293 (10%)
Query: 3 LVVEKRFPVDAKDYRLYEEV-GEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRR 61
L ++K +D DY++ +V G G++ V + E A+K+L D RR
Sbjct: 14 LQIKKNAIID--DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML------QDCPKARR 65
Query: 62 EVQT-MRVTNHPNVLR---AHCSFTTGH-CLWVVMPYMAGGSCLHIMKSAYPEGFEEPVI 116
EV+ R + P+++R + + G CL +VM + GG ++ + F E
Sbjct: 66 EVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREA 125
Query: 117 ATLLRETLKALVYLHFHGHIHRDVKAGNILIDS---NGAIKLADFGVSACMFDAGDRQRS 173
+ +++ +A+ YLH HRDVK N+L S N +KL DFG + S
Sbjct: 126 SEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA----KETTSHNS 181
Query: 174 RNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF------SKYPPMKVL 227
T TP ++APEV+ YD D+WS G+ L G+ PF + P MK
Sbjct: 182 LTTPCYTPYYVAPEVLGP-EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 240
Query: 228 LMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFKHA 280
+ Q P ++ S+ K L+ L +P +R T + M H + +
Sbjct: 241 IRMGQYEFPNPEWS---EVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 290
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 127/278 (45%), Gaps = 26/278 (9%)
Query: 16 YRLYEEVGEGVSATVYRALCIPLNEIVAIKVLD----LEKCNNDLDGIRREVQTMRVTNH 71
Y + EE+G G V+R + + K ++ L+K ++ E+ M +H
Sbjct: 53 YDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYT-----VKNEISIMNQLHH 107
Query: 72 PNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLH 131
P ++ H +F + + +++ +++GG + +A E + +R+ + L ++H
Sbjct: 108 PKLINLHDAFEDKYEMVLILEFLSGGELFDRI-AAEDYKMSEAEVINYMRQACEGLKHMH 166
Query: 132 FHGHIHRDVKAGNILIDSNGA--IKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVM 189
H +H D+K NI+ ++ A +K+ DFG++ + + T + APE++
Sbjct: 167 EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKL----NPDEIVKVTTATAEFAAPEIV 222
Query: 190 QQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDK----R 245
+ F D+W+ G+ L G +PF+ ++ TLQN D+E D+
Sbjct: 223 DR-EPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLE----TLQNV-KRCDWEFDEDAFSS 276
Query: 246 FSKSFKELVTACLVKDPKKRPTAEKLMKHHFFKHARSN 283
S K+ + L K+P+KR T ++H + K SN
Sbjct: 277 VSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHSN 314
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 128/290 (44%), Gaps = 31/290 (10%)
Query: 3 LVVEKRFPVDAKDYRLYEEV-GEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRR 61
L ++K +D DY++ +V G G++ V + E A+K+L D RR
Sbjct: 8 LQIKKNAIID--DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML------QDCPKARR 59
Query: 62 EVQT-MRVTNHPNVLR---AHCSFTTGH-CLWVVMPYMAGGSCLHIMKSAYPEGFEEPVI 116
EV+ R + P+++R + + G CL +VM + GG ++ + F E
Sbjct: 60 EVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREA 119
Query: 117 ATLLRETLKALVYLHFHGHIHRDVKAGNILIDS---NGAIKLADFGVSACMFDAGDRQRS 173
+ +++ +A+ YLH HRDVK N+L S N +KL DFG + S
Sbjct: 120 SEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA----KETTSHNS 175
Query: 174 RNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF------SKYPPMKVL 227
T TP ++APEV+ YD D+WS G+ L G+ PF + P MK
Sbjct: 176 LTTPCYTPYYVAPEVLGP-EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 234
Query: 228 LMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFF 277
+ Q P ++ S+ K L+ L +P +R T + M H +
Sbjct: 235 IRMGQYEFPNPEWS---EVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 281
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 119/274 (43%), Gaps = 36/274 (13%)
Query: 8 RFPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMR 67
++ ++ D + ++G G VY + + VA+K L + +++ +E M+
Sbjct: 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED--TMEVEEFLKEAAVMK 64
Query: 68 VTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKAL 127
HPN+++ T +++ +M G+ L ++ + V+ + + A+
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 124
Query: 128 VYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPE 187
YL IHRD+ A N L+ N +K+ADFG+S M GD + W APE
Sbjct: 125 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM--TGDTYTAHAGAKFPIKWTAPE 182
Query: 188 VMQQLHGYDFKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLD------- 239
+ + + K+D+W+FG+ E+A +G +P+ PG+D
Sbjct: 183 SL-AYNKFSIKSDVWAFGVLLWEIATYGMSPY-----------------PGIDLSQVYEL 224
Query: 240 YERDKRFSK------SFKELVTACLVKDPKKRPT 267
E+D R + EL+ AC +P RP+
Sbjct: 225 LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPS 258
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 101/210 (48%), Gaps = 18/210 (8%)
Query: 16 YRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGI----RREVQTMRVTNH 71
Y E++GEG TV++A +EIVA+K + L+ +D +G+ RE+ ++ H
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLD---DDDEGVPSSALREICLLKELKH 60
Query: 72 PNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPE---GFEEPVIATLLRETLKALV 128
N++R H + L +V + C +K + + ++ + L + LK L
Sbjct: 61 KNIVRLHDVLHSDKKLTLVFEF-----CDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLG 115
Query: 129 YLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEV 188
+ H +HRD+K N+LI+ NG +KLADFG++ G R + V T + P+V
Sbjct: 116 FCHSRNVLHRDLKPQNLLINRNGELKLADFGLARAF---GIPVRCYSAEVVTLWYRPPDV 172
Query: 189 MQQLHGYDFKADIWSFGITALELAHGHAPF 218
+ Y D+WS G ELA+ P
Sbjct: 173 LFGAKLYSTSIDMWSAGCIFAELANAARPL 202
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 111/239 (46%), Gaps = 21/239 (8%)
Query: 42 VAIKVLDL---EKCNNDLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGS 98
VAIK L + EK D G E M +HPN++R T + +V YM GS
Sbjct: 76 VAIKTLKVGYTEKQRRDFLG---EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGS 132
Query: 99 CLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADF 158
++ + F + +LR + YL G++HRD+ A NILI+SN K++DF
Sbjct: 133 LDSFLRK-HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDF 191
Query: 159 GVSACMFDAGDRQRSRNTFVG-TPC-WMAPEVMQQLHGYDFKADIWSFGITALE-LAHGH 215
G+S + D D + + T G P W +PE + + +D+WS+GI E +++G
Sbjct: 192 GLSRVLED--DPEAAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVMSYGE 248
Query: 216 APFSKYPPMKVLLMTLQN--APPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLM 272
P+ + V+ + PP +D + +L+ C KD RP E+++
Sbjct: 249 RPYWEMSNQDVIKAVDEGYRLPPPMD------CPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 111/239 (46%), Gaps = 21/239 (8%)
Query: 42 VAIKVLDL---EKCNNDLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGS 98
VAIK L + EK D G E M +HPN++R T + +V YM GS
Sbjct: 76 VAIKTLKVGYTEKQRRDFLG---EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGS 132
Query: 99 CLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADF 158
++ + F + +LR + YL G++HRD+ A NILI+SN K++DF
Sbjct: 133 LDSFLRK-HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDF 191
Query: 159 GVSACMFDAGDRQRSRNTFVG-TPC-WMAPEVMQQLHGYDFKADIWSFGITALE-LAHGH 215
G+S + D D + + T G P W +PE + + +D+WS+GI E +++G
Sbjct: 192 GLSRVLED--DPEAAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVMSYGE 248
Query: 216 APFSKYPPMKVLLMTLQN--APPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLM 272
P+ + V+ + PP +D + +L+ C KD RP E+++
Sbjct: 249 RPYWEMSNQDVIKAVDEGYRLPPPMD------CPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 111/239 (46%), Gaps = 21/239 (8%)
Query: 42 VAIKVLDL---EKCNNDLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGS 98
VAIK L + EK D G E M +HPN++R T + +V YM GS
Sbjct: 47 VAIKTLKVGYTEKQRRDFLG---EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGS 103
Query: 99 CLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADF 158
++ + F + +LR + YL G++HRD+ A NILI+SN K++DF
Sbjct: 104 LDSFLRK-HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDF 162
Query: 159 GVSACMFDAGDRQRSRNTFVG-TPC-WMAPEVMQQLHGYDFKADIWSFGITALE-LAHGH 215
G+S + D D + + T G P W +PE + + +D+WS+GI E +++G
Sbjct: 163 GLSRVLED--DPEAAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVMSYGE 219
Query: 216 APFSKYPPMKVLLMTLQN--APPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLM 272
P+ + V+ + PP +D + +L+ C KD RP E+++
Sbjct: 220 RPYWEMSNQDVIKAVDEGYRLPPPMD------CPAALYQLMLDCWQKDRNNRPKFEQIV 272
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 111/239 (46%), Gaps = 21/239 (8%)
Query: 42 VAIKVLDL---EKCNNDLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGS 98
VAIK L + EK D G E M +HPN++R T + +V YM GS
Sbjct: 64 VAIKTLKVGYTEKQRRDFLG---EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGS 120
Query: 99 CLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADF 158
++ + F + +LR + YL G++HRD+ A NILI+SN K++DF
Sbjct: 121 LDSFLRK-HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDF 179
Query: 159 GVSACMFDAGDRQRSRNTFVG-TPC-WMAPEVMQQLHGYDFKADIWSFGITALE-LAHGH 215
G+S + D D + + T G P W +PE + + +D+WS+GI E +++G
Sbjct: 180 GLSRVLED--DPEAAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVMSYGE 236
Query: 216 APFSKYPPMKVLLMTLQN--APPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLM 272
P+ + V+ + PP +D + +L+ C KD RP E+++
Sbjct: 237 RPYWEMSNQDVIKAVDEGYRLPPPMD------CPAALYQLMLDCWQKDRNNRPKFEQIV 289
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 111/239 (46%), Gaps = 21/239 (8%)
Query: 42 VAIKVLDL---EKCNNDLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGS 98
VAIK L + EK D G E M +HPN++R T + +V YM GS
Sbjct: 76 VAIKTLKVGYTEKQRRDFLG---EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGS 132
Query: 99 CLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADF 158
++ + F + +LR + YL G++HRD+ A NILI+SN K++DF
Sbjct: 133 LDSFLRK-HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDF 191
Query: 159 GVSACMFDAGDRQRSRNTFVG-TPC-WMAPEVMQQLHGYDFKADIWSFGITALE-LAHGH 215
G+S + D D + + T G P W +PE + + +D+WS+GI E +++G
Sbjct: 192 GLSRVLED--DPEAAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVMSYGE 248
Query: 216 APFSKYPPMKVLLMTLQN--APPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLM 272
P+ + V+ + PP +D + +L+ C KD RP E+++
Sbjct: 249 RPYWEMSNQDVIKAVDEGYRLPPPMD------CPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 123/277 (44%), Gaps = 19/277 (6%)
Query: 11 VDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTN 70
+D K Y +++GEG + V + A+K + + D + +RE R+ N
Sbjct: 26 IDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHE-QQDREEAQREADMHRLFN 84
Query: 71 HPNVLR--AHCSFTTG--HCLWVVMPYMAGGSCLHIMKSAYPEG--FEEPVIATLLRETL 124
HPN+LR A+C G H W+++P+ G+ + ++ +G E I LL
Sbjct: 85 HPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGIC 144
Query: 125 KALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGV--SACMFDAGDRQR-SRNTFVGTP 181
+ L +H G+ HRD+K NIL+ G L D G AC+ G RQ + +
Sbjct: 145 RGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQR 204
Query: 182 C---WMAPEV--MQQLHGYDFKADIWSFGITALELAHGHAPFSK-YPPMKVLLMTLQNAP 235
C + APE+ +Q D + D+WS G + G P+ + + + +QN
Sbjct: 205 CTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQ- 263
Query: 236 PGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLM 272
L + R S + +L+ + + DP +RP L+
Sbjct: 264 --LSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLL 298
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 129/293 (44%), Gaps = 31/293 (10%)
Query: 3 LVVEKRFPVDAKDYRLYEEV-GEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRR 61
L ++K +D DY++ +V G G++ V + E A+K+L D RR
Sbjct: 12 LQIKKNAIID--DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML------QDCPKARR 63
Query: 62 EVQT-MRVTNHPNVLR---AHCSFTTGH-CLWVVMPYMAGGSCLHIMKSAYPEGFEEPVI 116
EV+ R + P+++R + + G CL +VM + GG ++ + F E
Sbjct: 64 EVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREA 123
Query: 117 ATLLRETLKALVYLHFHGHIHRDVKAGNILIDS---NGAIKLADFGVSACMFDAGDRQRS 173
+ +++ +A+ YLH HRDVK N+L S N +KL DFG + S
Sbjct: 124 SEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA----KETTSHNS 179
Query: 174 RNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF------SKYPPMKVL 227
T TP ++APEV+ YD D+WS G+ L G+ PF + P MK
Sbjct: 180 LTTPCYTPYYVAPEVLGP-EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 238
Query: 228 LMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFKHA 280
+ Q P ++ S+ K L+ L +P +R T + M H + +
Sbjct: 239 IRMGQYEFPNPEW---SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 288
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 111/239 (46%), Gaps = 21/239 (8%)
Query: 42 VAIKVLDL---EKCNNDLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGS 98
VAIK L + EK D G E M +HPN++R T + +V YM GS
Sbjct: 76 VAIKTLKVGYTEKQRRDFLG---EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGS 132
Query: 99 CLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADF 158
++ + F + +LR + YL G++HRD+ A NILI+SN K++DF
Sbjct: 133 LDSFLRK-HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDF 191
Query: 159 GVSACMFDAGDRQRSRNTFVG-TPC-WMAPEVMQQLHGYDFKADIWSFGITALE-LAHGH 215
G+S + D D + + T G P W +PE + + +D+WS+GI E +++G
Sbjct: 192 GLSRVLED--DPEAAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVMSYGE 248
Query: 216 APFSKYPPMKVLLMTLQN--APPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLM 272
P+ + V+ + PP +D + +L+ C KD RP E+++
Sbjct: 249 RPYWEMSNQDVIKAVDEGYRLPPPMD------CPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 128/290 (44%), Gaps = 31/290 (10%)
Query: 3 LVVEKRFPVDAKDYRLYEEV-GEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRR 61
L ++K +D DY++ +V G G++ V + E A+K+L D RR
Sbjct: 8 LQIKKNAIID--DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML------QDCPKARR 59
Query: 62 EVQT-MRVTNHPNVLR---AHCSFTTGH-CLWVVMPYMAGGSCLHIMKSAYPEGFEEPVI 116
EV+ R + P+++R + + G CL +VM + GG ++ + F E
Sbjct: 60 EVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREA 119
Query: 117 ATLLRETLKALVYLHFHGHIHRDVKAGNILIDS---NGAIKLADFGVSACMFDAGDRQRS 173
+ +++ +A+ YLH HRDVK N+L S N +KL DFG + S
Sbjct: 120 SEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA----KETTSHNS 175
Query: 174 RNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF------SKYPPMKVL 227
T TP ++APEV+ YD D+WS G+ L G+ PF + P MK
Sbjct: 176 LTTPCYTPYYVAPEVLGP-EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 234
Query: 228 LMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFF 277
+ Q P ++ S+ K L+ L +P +R T + M H +
Sbjct: 235 IRMGQYEFPNPEW---SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 281
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 111/239 (46%), Gaps = 21/239 (8%)
Query: 42 VAIKVLDL---EKCNNDLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGS 98
VAIK L + EK D G E M +HPN++R T + +V YM GS
Sbjct: 74 VAIKTLKVGYTEKQRRDFLG---EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGS 130
Query: 99 CLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADF 158
++ + F + +LR + YL G++HRD+ A NILI+SN K++DF
Sbjct: 131 LDSFLRK-HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDF 189
Query: 159 GVSACMFDAGDRQRSRNTFVG-TPC-WMAPEVMQQLHGYDFKADIWSFGITALE-LAHGH 215
G+S + D D + + T G P W +PE + + +D+WS+GI E +++G
Sbjct: 190 GLSRVLED--DPEAAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVMSYGE 246
Query: 216 APFSKYPPMKVLLMTLQN--APPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLM 272
P+ + V+ + PP +D + +L+ C KD RP E+++
Sbjct: 247 RPYWEMSNQDVIKAVDEGYRLPPPMD------CPAALYQLMLDCWQKDRNNRPKFEQIV 299
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 136/283 (48%), Gaps = 25/283 (8%)
Query: 11 VDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNND-LDGIRREVQTM-RV 68
V + Y + +++G G S+ V++ L +I AIK ++LE+ +N LD R E+ + ++
Sbjct: 53 VKGRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKL 111
Query: 69 TNHPN-VLRAHCSFTTGHCLWVVMPY--MAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
H + ++R + T +++VM + S L KS P +E + + L+
Sbjct: 112 QQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDP--WER---KSYWKNMLE 166
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
A+ +H HG +H D+K N LI +G +KL DFG++ M +++ VGT +M
Sbjct: 167 AVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQM-QPDTTSVVKDSQVGTVNYMP 224
Query: 186 PEVMQQLHG----------YDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAP 235
PE ++ + K+D+WS G + +G PF + L + +
Sbjct: 225 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID-- 282
Query: 236 PGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFK 278
P + E K ++++ CL +DPK+R + +L+ H + +
Sbjct: 283 PNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 129/293 (44%), Gaps = 31/293 (10%)
Query: 3 LVVEKRFPVDAKDYRLYEEV-GEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRR 61
L ++K +D DY++ +V G G++ V + E A+K+L D RR
Sbjct: 13 LQIKKNAIID--DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML------QDCPKARR 64
Query: 62 EVQT-MRVTNHPNVLR---AHCSFTTGH-CLWVVMPYMAGGSCLHIMKSAYPEGFEEPVI 116
EV+ R + P+++R + + G CL +VM + GG ++ + F E
Sbjct: 65 EVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREA 124
Query: 117 ATLLRETLKALVYLHFHGHIHRDVKAGNILIDS---NGAIKLADFGVSACMFDAGDRQRS 173
+ +++ +A+ YLH HRDVK N+L S N +KL DFG + S
Sbjct: 125 SEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA----KETTSHNS 180
Query: 174 RNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF------SKYPPMKVL 227
T TP ++APEV+ YD D+WS G+ L G+ PF + P MK
Sbjct: 181 LTTPCYTPYYVAPEVLGP-EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 239
Query: 228 LMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFKHA 280
+ Q P ++ S+ K L+ L +P +R T + M H + +
Sbjct: 240 IRMGQYEFPNPEW---SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 289
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 136/283 (48%), Gaps = 25/283 (8%)
Query: 11 VDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNND-LDGIRREVQTM-RV 68
V + Y + +++G G S+ V++ L +I AIK ++LE+ +N LD R E+ + ++
Sbjct: 53 VKGRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKL 111
Query: 69 TNHPN-VLRAHCSFTTGHCLWVVMPY--MAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
H + ++R + T +++VM + S L KS P +E + + L+
Sbjct: 112 QQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDP--WER---KSYWKNMLE 166
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
A+ +H HG +H D+K N LI +G +KL DFG++ M +++ VGT +M
Sbjct: 167 AVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQM-QPDTTSVVKDSQVGTVNYMP 224
Query: 186 PEVMQQLHG----------YDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAP 235
PE ++ + K+D+WS G + +G PF + L + +
Sbjct: 225 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID-- 282
Query: 236 PGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFK 278
P + E K ++++ CL +DPK+R + +L+ H + +
Sbjct: 283 PNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 141/304 (46%), Gaps = 32/304 (10%)
Query: 16 YRLYEEV-GEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTM-RVTNHPN 73
Y+L E+V GEG A V + + ++ A+K+++ + + + REV+ + + H N
Sbjct: 14 YQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP-GHIRSRVFREVEMLYQCQGHRN 72
Query: 74 VLRAHCSFTTGHCLWVVMPYMAGGSCL-HIMKSAYPEGFEEPVIATLLRETLKALVYLHF 132
VL F ++V M GGS L HI K + F E + ++++ AL +LH
Sbjct: 73 VLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRH---FNELEASVVVQDVASALDFLHN 129
Query: 133 HGHIHRDVKAGNILID---SNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPC----WMA 185
G HRD+K NIL + +K+ DFG+ + + GD + TPC +MA
Sbjct: 130 KGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMA 189
Query: 186 PEVMQQLHG----YDFKADIWSFGITALELAHGHAPF-------------SKYPPMK-VL 227
PEV++ YD + D+WS G+ L G+ PF P + +L
Sbjct: 190 PEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNML 249
Query: 228 LMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFKHARSNDFLA 287
++Q + S + K+L++ LV+D K+R +A ++++H + + + L
Sbjct: 250 FESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAPENTLP 309
Query: 288 RSIV 291
+V
Sbjct: 310 TPMV 313
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 112/220 (50%), Gaps = 18/220 (8%)
Query: 4 VVEKRFPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGI---- 59
++ + F +D D+ + +G+G VY A + IVA+KVL K + +G+
Sbjct: 15 ILTRHFTID--DFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLF--KSQIEKEGVEHQL 70
Query: 60 RREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATL 119
RRE++ +HPN+LR + F +++++ Y G ++ + F+E AT+
Sbjct: 71 RREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSC--TFDEQRTATI 128
Query: 120 LRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVG 179
+ E AL+Y H IHRD+K N+L+ G +K+ADFG S R T G
Sbjct: 129 MEELADALMYCHGKKVIHRDIKPENLLLGLKGELKIADFGWS-----VHAPSLRRKTMCG 183
Query: 180 TPCWMAPEVMQ-QLHGYDFKADIWSFGITALELAHGHAPF 218
T ++ PE+++ ++H + K D+W G+ EL G+ PF
Sbjct: 184 TLDYLPPEMIEGRMH--NEKVDLWCIGVLCYELLVGNPPF 221
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 128/290 (44%), Gaps = 31/290 (10%)
Query: 3 LVVEKRFPVDAKDYRLYEEV-GEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRR 61
L ++K +D DY++ +V G G++ V + E A+K+L D RR
Sbjct: 7 LQIKKNAIID--DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML------QDCPKARR 58
Query: 62 EVQT-MRVTNHPNVLR---AHCSFTTGH-CLWVVMPYMAGGSCLHIMKSAYPEGFEEPVI 116
EV+ R + P+++R + + G CL +VM + GG ++ + F E
Sbjct: 59 EVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREA 118
Query: 117 ATLLRETLKALVYLHFHGHIHRDVKAGNILIDS---NGAIKLADFGVSACMFDAGDRQRS 173
+ +++ +A+ YLH HRDVK N+L S N +KL DFG + S
Sbjct: 119 SEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA----KETTSHNS 174
Query: 174 RNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF------SKYPPMKVL 227
T TP ++APEV+ YD D+WS G+ L G+ PF + P MK
Sbjct: 175 LTTPCYTPYYVAPEVLGP-EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 233
Query: 228 LMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFF 277
+ Q P ++ S+ K L+ L +P +R T + M H +
Sbjct: 234 IRMGQYEFPNPEWS---EVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 280
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 128/290 (44%), Gaps = 31/290 (10%)
Query: 3 LVVEKRFPVDAKDYRLYEEV-GEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRR 61
L ++K +D DY++ +V G G++ V + E A+K+L D RR
Sbjct: 6 LQIKKNAIID--DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML------QDCPKARR 57
Query: 62 EVQT-MRVTNHPNVLR---AHCSFTTGH-CLWVVMPYMAGGSCLHIMKSAYPEGFEEPVI 116
EV+ R + P+++R + + G CL +VM + GG ++ + F E
Sbjct: 58 EVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREA 117
Query: 117 ATLLRETLKALVYLHFHGHIHRDVKAGNILIDS---NGAIKLADFGVSACMFDAGDRQRS 173
+ +++ +A+ YLH HRDVK N+L S N +KL DFG + S
Sbjct: 118 SEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA----KETTSHNS 173
Query: 174 RNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF------SKYPPMKVL 227
T TP ++APEV+ YD D+WS G+ L G+ PF + P MK
Sbjct: 174 LTTPCYTPYYVAPEVLGP-EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 232
Query: 228 LMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFF 277
+ Q P ++ S+ K L+ L +P +R T + M H +
Sbjct: 233 IRMGQYEFPNPEWS---EVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 279
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 136/283 (48%), Gaps = 25/283 (8%)
Query: 11 VDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNND-LDGIRREVQTM-RV 68
V + Y + +++G G S+ V++ L +I AIK ++LE+ +N LD R E+ + ++
Sbjct: 25 VKGRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKL 83
Query: 69 TNHPN-VLRAHCSFTTGHCLWVVMPY--MAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
H + ++R + T +++VM + S L KS P +E + + L+
Sbjct: 84 QQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDP--WER---KSYWKNMLE 138
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
A+ +H HG +H D+K N LI +G +KL DFG++ M +++ VGT +M
Sbjct: 139 AVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQM-QPDXXXVVKDSQVGTVNYMP 196
Query: 186 PEVMQQLHG----------YDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAP 235
PE ++ + K+D+WS G + +G PF + L + +
Sbjct: 197 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID-- 254
Query: 236 PGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFK 278
P + E K ++++ CL +DPK+R + +L+ H + +
Sbjct: 255 PNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 297
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 136/283 (48%), Gaps = 25/283 (8%)
Query: 11 VDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNND-LDGIRREVQTM-RV 68
V + Y + +++G G S+ V++ L +I AIK ++LE+ +N LD R E+ + ++
Sbjct: 6 VKGRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKL 64
Query: 69 TNHPN-VLRAHCSFTTGHCLWVVMPY--MAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
H + ++R + T +++VM + S L KS P +E + + L+
Sbjct: 65 QQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDP--WER---KSYWKNMLE 119
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
A+ +H HG +H D+K N LI +G +KL DFG++ M +++ VGT +M
Sbjct: 120 AVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQM-QPDTTSVVKDSQVGTVNYMP 177
Query: 186 PEVMQQLHG----------YDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAP 235
PE ++ + K+D+WS G + +G PF + L + +
Sbjct: 178 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID-- 235
Query: 236 PGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFK 278
P + E K ++++ CL +DPK+R + +L+ H + +
Sbjct: 236 PNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 278
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 129/296 (43%), Gaps = 34/296 (11%)
Query: 21 EVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR-REVQTMRVTNHPNVLRAHC 79
++GEG V++ +IVAIK + + + I RE++ ++ HPN++
Sbjct: 10 KIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLE 69
Query: 80 SFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRD 139
F L +V Y + LH + Y G E ++ ++ +TL+A+ + H H IHRD
Sbjct: 70 VFRRKRRLHLVFEY-CDHTVLHEL-DRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRD 127
Query: 140 VKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKA 199
VK NILI + IKL DFG + + D V T + +PE++ Y
Sbjct: 128 VKPENILITKHSVIKLCDFGFARLLTGPSDYYDDE---VATRWYRSPELLVGDTQYGPPV 184
Query: 200 DIWSFGITALELAHGHAPF----SKYPPMKVLLMTLQNAPP-------------GL---D 239
D+W+ G EL G P S + ++ TL + P G+ D
Sbjct: 185 DVWAIGCVFAELLSG-VPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPD 243
Query: 240 YERDKRFSKSFKE-------LVTACLVKDPKKRPTAEKLMKHHFFKHARSNDFLAR 288
E + F L+ CL DP +R T E+L+ H +F++ R + LA+
Sbjct: 244 PEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIREIEDLAK 299
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 136/283 (48%), Gaps = 25/283 (8%)
Query: 11 VDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNND-LDGIRREVQTM-RV 68
V + Y + +++G G S+ V++ L +I AIK ++LE+ +N LD R E+ + ++
Sbjct: 25 VKGRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKL 83
Query: 69 TNHPN-VLRAHCSFTTGHCLWVVMPY--MAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
H + ++R + T +++VM + S L KS P +E + + L+
Sbjct: 84 QQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDP--WER---KSYWKNMLE 138
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
A+ +H HG +H D+K N LI +G +KL DFG++ M +++ VGT +M
Sbjct: 139 AVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQM-QPDTTSVVKDSQVGTVNYMP 196
Query: 186 PEVMQQLHG----------YDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAP 235
PE ++ + K+D+WS G + +G PF + L + +
Sbjct: 197 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID-- 254
Query: 236 PGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFK 278
P + E K ++++ CL +DPK+R + +L+ H + +
Sbjct: 255 PNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 297
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 111/239 (46%), Gaps = 21/239 (8%)
Query: 42 VAIKVLDL---EKCNNDLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGS 98
VAIK L + EK D G E M +HPN++R T + +V YM GS
Sbjct: 76 VAIKTLKVGYTEKQRRDFLG---EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGS 132
Query: 99 CLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADF 158
++ + F + +LR + YL G++HRD+ A NILI+SN K++DF
Sbjct: 133 LDSFLRK-HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDF 191
Query: 159 GVSACMFDAGDRQRSRNTFVG-TPC-WMAPEVMQQLHGYDFKADIWSFGITALE-LAHGH 215
G++ + D D + + T G P W +PE + + +D+WS+GI E +++G
Sbjct: 192 GLARVLED--DPEAAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVMSYGE 248
Query: 216 APFSKYPPMKVLLMTLQN--APPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLM 272
P+ + V+ + PP +D + +L+ C KD RP E+++
Sbjct: 249 RPYWEMSNQDVIKAVDEGYRLPPPMD------CPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 110/239 (46%), Gaps = 21/239 (8%)
Query: 42 VAIKVLDL---EKCNNDLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGS 98
VAIK L + EK D G E M +HPN++R T + +V YM GS
Sbjct: 76 VAIKTLKVGYTEKQRRDFLG---EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGS 132
Query: 99 CLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADF 158
++ + F + +LR + YL G +HRD+ A NILI+SN K++DF
Sbjct: 133 LDSFLRK-HDAQFTVIQLVGMLRGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDF 191
Query: 159 GVSACMFDAGDRQRSRNTFVG-TPC-WMAPEVMQQLHGYDFKADIWSFGITALE-LAHGH 215
G+S + D D + + T G P W +PE + + +D+WS+GI E +++G
Sbjct: 192 GLSRVLED--DPEAAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVMSYGE 248
Query: 216 APFSKYPPMKVLLMTLQN--APPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLM 272
P+ + V+ + PP +D + +L+ C KD RP E+++
Sbjct: 249 RPYWEMSNQDVIKAVDEGYRLPPPMD------CPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 121/268 (45%), Gaps = 20/268 (7%)
Query: 9 FPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRV 68
+ V + +L E +G G V+ N + V L++ + D E M+
Sbjct: 4 WEVPRETLKLVERLGAGQFGEVWMGY---YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQ 60
Query: 69 TNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPV--IATLLRETLKA 126
H ++R + + T ++++ YM GS + +K+ P G + + + + + +
Sbjct: 61 LQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEG 117
Query: 127 LVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPC-WMA 185
+ ++ +IHR+++A NIL+ + K+ADFG++ + D R F P W A
Sbjct: 118 MAFIEERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF---PIKWTA 174
Query: 186 PEVMQQLHG-YDFKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLDYERD 243
PE + +G + K+D+WSFGI E+ HG P+ +V +QN G R
Sbjct: 175 PEAIN--YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV----IQNLERGYRMVRP 228
Query: 244 KRFSKSFKELVTACLVKDPKKRPTAEKL 271
+ +L+ C + P+ RPT + L
Sbjct: 229 DNCPEELYQLMRLCWKERPEDRPTFDYL 256
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 136/283 (48%), Gaps = 25/283 (8%)
Query: 11 VDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNND-LDGIRREVQTM-RV 68
V + Y + +++G G S+ V++ L +I AIK ++LE+ +N LD R E+ + ++
Sbjct: 9 VKGRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKL 67
Query: 69 TNHPN-VLRAHCSFTTGHCLWVVMPY--MAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
H + ++R + T +++VM + S L KS P +E + + L+
Sbjct: 68 QQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDP--WER---KSYWKNMLE 122
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
A+ +H HG +H D+K N LI +G +KL DFG++ M +++ VGT +M
Sbjct: 123 AVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQM-QPDTTSVVKDSQVGTVNYMP 180
Query: 186 PEVMQQLHG----------YDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAP 235
PE ++ + K+D+WS G + +G PF + L + +
Sbjct: 181 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID-- 238
Query: 236 PGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFK 278
P + E K ++++ CL +DPK+R + +L+ H + +
Sbjct: 239 PNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 281
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 108/224 (48%), Gaps = 20/224 (8%)
Query: 59 IRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIAT 118
I REV +R H NV+ H + + +++ ++GG + A E E +
Sbjct: 62 IEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL--AQKESLSEEEATS 119
Query: 119 LLRETLKALVYLHFHGHIHRDVKAGNI-LIDSNGA---IKLADFGVSACMFDAGDRQRSR 174
+++ L + YLH H D+K NI L+D N IKL DFG++ + D + +
Sbjct: 120 FIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE---FK 176
Query: 175 NTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNA 234
N F GTP ++APE++ +AD+WS G+ L G +PF + TL N
Sbjct: 177 NIF-GTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE----TLANI 230
Query: 235 PPGLDYERDKRF----SKSFKELVTACLVKDPKKRPTAEKLMKH 274
+ Y+ D+ F S+ K+ + LVK+ +KR T ++ ++H
Sbjct: 231 -TAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRH 273
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 110/239 (46%), Gaps = 21/239 (8%)
Query: 42 VAIKVLDL---EKCNNDLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGS 98
VAIK L + EK D G E M +HPN++R T + +V YM GS
Sbjct: 76 VAIKTLKVGYTEKQRRDFLG---EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGS 132
Query: 99 CLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADF 158
++ + F + +LR + YL G++HRD+ A NILI+SN K++DF
Sbjct: 133 LDSFLRK-HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDF 191
Query: 159 GVSACMFDAGDRQRSRNTFVG-TPC-WMAPEVMQQLHGYDFKADIWSFGITALE-LAHGH 215
G+ + D D + + T G P W +PE + + +D+WS+GI E +++G
Sbjct: 192 GLGRVLED--DPEAAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVMSYGE 248
Query: 216 APFSKYPPMKVLLMTLQN--APPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLM 272
P+ + V+ + PP +D + +L+ C KD RP E+++
Sbjct: 249 RPYWEMSNQDVIKAVDEGYRLPPPMD------CPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 136/283 (48%), Gaps = 25/283 (8%)
Query: 11 VDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNND-LDGIRREVQTM-RV 68
V + Y + +++G G S+ V++ L +I AIK ++LE+ +N LD R E+ + ++
Sbjct: 5 VKGRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKL 63
Query: 69 TNHPN-VLRAHCSFTTGHCLWVVMPY--MAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
H + ++R + T +++VM + S L KS P +E + + L+
Sbjct: 64 QQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDP--WER---KSYWKNMLE 118
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
A+ +H HG +H D+K N LI +G +KL DFG++ M +++ VGT +M
Sbjct: 119 AVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQM-QPDTTSVVKDSQVGTVNYMP 176
Query: 186 PEVMQQLHG----------YDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAP 235
PE ++ + K+D+WS G + +G PF + L + +
Sbjct: 177 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID-- 234
Query: 236 PGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFK 278
P + E K ++++ CL +DPK+R + +L+ H + +
Sbjct: 235 PNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 277
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 108/224 (48%), Gaps = 20/224 (8%)
Query: 59 IRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIAT 118
I REV +R H NV+ H + + +++ ++GG + A E E +
Sbjct: 62 IEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL--AQKESLSEEEATS 119
Query: 119 LLRETLKALVYLHFHGHIHRDVKAGNI-LIDSNGA---IKLADFGVSACMFDAGDRQRSR 174
+++ L + YLH H D+K NI L+D N IKL DFG++ + D + +
Sbjct: 120 FIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE---FK 176
Query: 175 NTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNA 234
N F GTP ++APE++ +AD+WS G+ L G +PF + TL N
Sbjct: 177 NIF-GTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE----TLANI 230
Query: 235 PPGLDYERDKRF----SKSFKELVTACLVKDPKKRPTAEKLMKH 274
+ Y+ D+ F S+ K+ + LVK+ +KR T ++ ++H
Sbjct: 231 -TAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRH 273
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 108/224 (48%), Gaps = 20/224 (8%)
Query: 59 IRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIAT 118
I REV +R H NV+ H + + +++ ++GG + A E E +
Sbjct: 62 IEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL--AQKESLSEEEATS 119
Query: 119 LLRETLKALVYLHFHGHIHRDVKAGNI-LIDSNGA---IKLADFGVSACMFDAGDRQRSR 174
+++ L + YLH H D+K NI L+D N IKL DFG++ + D + +
Sbjct: 120 FIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE---FK 176
Query: 175 NTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNA 234
N F GTP ++APE++ +AD+WS G+ L G +PF + TL N
Sbjct: 177 NIF-GTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE----TLANI 230
Query: 235 PPGLDYERDKRF----SKSFKELVTACLVKDPKKRPTAEKLMKH 274
+ Y+ D+ F S+ K+ + LVK+ +KR T ++ ++H
Sbjct: 231 -TSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRH 273
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 18/210 (8%)
Query: 16 YRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGI----RREVQTMRVTNH 71
Y E++GEG TV++A +EIVA+K + L+ +D +G+ RE+ ++ H
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLD---DDDEGVPSSALREICLLKELKH 60
Query: 72 PNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPE---GFEEPVIATLLRETLKALV 128
N++R H + L +V + C +K + + ++ + L + LK L
Sbjct: 61 KNIVRLHDVLHSDKKLTLVFEF-----CDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLG 115
Query: 129 YLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEV 188
+ H +HRD+K N+LI+ NG +KLA+FG++ G R + V T + P+V
Sbjct: 116 FCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAF---GIPVRCYSAEVVTLWYRPPDV 172
Query: 189 MQQLHGYDFKADIWSFGITALELAHGHAPF 218
+ Y D+WS G ELA+ P
Sbjct: 173 LFGAKLYSTSIDMWSAGCIFAELANAGRPL 202
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 135/283 (47%), Gaps = 25/283 (8%)
Query: 11 VDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNND-LDGIRREVQTM-RV 68
V + Y + +++G G S+ V++ L +I AIK ++LE+ +N LD R E+ + ++
Sbjct: 53 VKGRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKL 111
Query: 69 TNHPN-VLRAHCSFTTGHCLWVVMPY--MAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
H + ++R + T +++VM + S L KS P +E + + L+
Sbjct: 112 QQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDP--WER---KSYWKNMLE 166
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
A+ +H HG +H D+K N LI +G +KL DFG++ M +++ VG +M
Sbjct: 167 AVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQM-QPDTTSVVKDSQVGAVNYMP 224
Query: 186 PEVMQQLHG----------YDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAP 235
PE ++ + K+D+WS G + +G PF + L + +
Sbjct: 225 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID-- 282
Query: 236 PGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFK 278
P + E K ++++ CL +DPK+R + +L+ H + +
Sbjct: 283 PNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 108/224 (48%), Gaps = 20/224 (8%)
Query: 59 IRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIAT 118
I REV +R H NV+ H + + +++ ++GG + A E E +
Sbjct: 62 IEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL--AQKESLSEEEATS 119
Query: 119 LLRETLKALVYLHFHGHIHRDVKAGNI-LIDSN---GAIKLADFGVSACMFDAGDRQRSR 174
+++ L + YLH H D+K NI L+D N IKL DFG++ + D + +
Sbjct: 120 FIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE---FK 176
Query: 175 NTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNA 234
N F GTP ++APE++ +AD+WS G+ L G +PF + TL N
Sbjct: 177 NIF-GTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE----TLANI 230
Query: 235 PPGLDYERDKRF----SKSFKELVTACLVKDPKKRPTAEKLMKH 274
+ Y+ D+ F S+ K+ + LVK+ +KR T ++ ++H
Sbjct: 231 -TSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRH 273
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 121/283 (42%), Gaps = 42/283 (14%)
Query: 11 VDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDL---EKCNNDLDGIRREVQTMR 67
+D + L E +G G VYRA I + VA+K E + ++ +R+E +
Sbjct: 4 IDFAELTLEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFA 61
Query: 68 VTNHPNV--LRAHCSFTTGHCLWVVMPYMAGGSCLHIM--KSAYPEGFEEPVIATLLRET 123
+ HPN+ LR C CL VM + GG ++ K P+ ++ +
Sbjct: 62 MLKHPNIIALRGVCLKEPNLCL--VMEFARGGPLNRVLSGKRIPPD-----ILVNWAVQI 114
Query: 124 LKALVYLHFHGH---IHRDVKAGNILID--------SNGAIKLADFGVSACMFDAGDRQR 172
+ + YLH IHRD+K+ NILI SN +K+ DFG++ R+
Sbjct: 115 ARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA--------REW 166
Query: 173 SRNTFV---GTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLM 229
R T + G WMAPEV++ + +D+WS+G+ EL G PF + V
Sbjct: 167 HRTTKMSAAGAYAWMAPEVIRA-SMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYG 225
Query: 230 TLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLM 272
N L + F +L+ C DP RP+ ++
Sbjct: 226 VAMNK---LALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNIL 265
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 108/224 (48%), Gaps = 20/224 (8%)
Query: 59 IRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIAT 118
I REV +R H NV+ H + + +++ ++GG + A E E +
Sbjct: 62 IEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL--AQKESLSEEEATS 119
Query: 119 LLRETLKALVYLHFHGHIHRDVKAGNI-LIDSN---GAIKLADFGVSACMFDAGDRQRSR 174
+++ L + YLH H D+K NI L+D N IKL DFG++ + D + +
Sbjct: 120 FIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE---FK 176
Query: 175 NTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNA 234
N F GTP ++APE++ +AD+WS G+ L G +PF + TL N
Sbjct: 177 NIF-GTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE----TLANI 230
Query: 235 PPGLDYERDKRF----SKSFKELVTACLVKDPKKRPTAEKLMKH 274
+ Y+ D+ F S+ K+ + LVK+ +KR T ++ ++H
Sbjct: 231 -TSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRH 273
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 132/288 (45%), Gaps = 31/288 (10%)
Query: 9 FPVDAKDYRLYEEVGEGVSATVYRALCIPLNE-------IVAIKVLDLEKCNNDLDGIRR 61
FP D L + +GEG V A + +++ VA+K+L + DL +
Sbjct: 32 FPRDK--LTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVS 89
Query: 62 EVQTMR-VTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLL 120
E++ M+ + H N++ + T L+V++ Y + G+ +++ P G E +
Sbjct: 90 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRV 149
Query: 121 RE---TLKALV-----------YLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFD 166
E T K LV YL IHRD+ A N+L+ N +K+ADFG++ + +
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINN 209
Query: 167 AGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMK 225
+++ N + WMAPE + Y ++D+WSFG+ E+ G +P+ P++
Sbjct: 210 IDXXKKTTNGRLPVK-WMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGI-PVE 266
Query: 226 VLLMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMK 273
L L+ G ++ + ++ C P +RPT ++L++
Sbjct: 267 ELFKLLKE---GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 129/293 (44%), Gaps = 37/293 (12%)
Query: 3 LVVEKRFPVDAKDYRLYEEV-GEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRR 61
L ++K +D DY++ +V G G++ V + E A+K+L D RR
Sbjct: 6 LQIKKNAIID--DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML------QDCPKARR 57
Query: 62 EVQT-MRVTNHPNVLR---AHCSFTTGH-CLWVVMPYMAGGSCLHIMKSAYPEGFEEPVI 116
EV+ R + P+++R + + G CL +VM + GG ++ + F E
Sbjct: 58 EVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREA 117
Query: 117 ATLLRETLKALVYLHFHGHIHRDVKAGNILIDS---NGAIKLADFGVSACMFDAGDRQRS 173
+ +++ +A+ YLH HRDVK N+L S N +KL DFG + S
Sbjct: 118 SEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA-------KETTS 170
Query: 174 RNTFVG---TPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF------SKYPPM 224
N+ TP ++APEV+ YD D+WS G+ L G+ PF + P M
Sbjct: 171 HNSLTEPCYTPYYVAPEVLGP-EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM 229
Query: 225 KVLLMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFF 277
K + Q P ++ S+ K L+ L +P +R T + M H +
Sbjct: 230 KTRIRMGQYEFPNPEW---SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 279
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 6/209 (2%)
Query: 13 AKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHP 72
+ ++ E++G G ATVY+ L VA+K + L+ RE+ M+ H
Sbjct: 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHE 63
Query: 73 NVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAY---PEGFEEPVIATLLRETLKALVY 129
N++R + T + L +V +M ++ P G E ++ + L+ L +
Sbjct: 64 NIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAF 123
Query: 130 LHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVM 189
H + +HRD+K N+LI+ G +KL DFG++ G + ++ V T + AP+V+
Sbjct: 124 CHENKILHRDLKPQNLLINKRGQLKLGDFGLARAF---GIPVNTFSSEVVTLWYRAPDVL 180
Query: 190 QQLHGYDFKADIWSFGITALELAHGHAPF 218
Y DIWS G E+ G F
Sbjct: 181 MGSRTYSTSIDIWSCGCILAEMITGKPLF 209
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 108/257 (42%), Gaps = 13/257 (5%)
Query: 17 RLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLR 76
+L + +G G V+ N + V L+ + E M+ H ++R
Sbjct: 16 KLVKRLGAGQFGEVWMGY---YNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVR 72
Query: 77 AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHI 136
+ T ++++ YMA GS L +KS P + + + + Y+ +I
Sbjct: 73 LYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYI 132
Query: 137 HRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPC-WMAPEVMQQLHGY 195
HRD++A N+L+ + K+ADFG++ + D R F P W APE + +
Sbjct: 133 HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKF---PIKWTAPEAI-NFGCF 188
Query: 196 DFKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKELV 254
K+D+WSFGI E+ +G P+ V+ Q G R + +++
Sbjct: 189 TIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQ----GYRMPRVENCPDELYDIM 244
Query: 255 TACLVKDPKKRPTAEKL 271
C + ++RPT + L
Sbjct: 245 KMCWKEKAEERPTFDYL 261
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 121/270 (44%), Gaps = 21/270 (7%)
Query: 16 YRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVL 75
Y + E++G G V+R + + K + ++ + L +++E+ + + H N+L
Sbjct: 7 YMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVL--VKKEISILNIARHRNIL 64
Query: 76 RAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFE--EPVIATLLRETLKALVYLHFH 133
H SF + L ++ +++G L I + FE E I + + + +AL +LH H
Sbjct: 65 HLHESFESMEELVMIFEFISG---LDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH 121
Query: 134 GHIHRDVKAGNILIDS--NGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQ 191
H D++ NI+ + + IK+ +FG A GD R T P + APEV
Sbjct: 122 NIGHFDIRPENIIYQTRRSSTIKIIEFG-QARQLKPGDNFRLLFT---APEYYAPEV--- 174
Query: 192 LHGYDF---KADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSK 248
H +D D+WS G L G PF +++ + NA D E K S
Sbjct: 175 -HQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQII-ENIMNAEYTFDEEAFKEISI 232
Query: 249 SFKELVTACLVKDPKKRPTAEKLMKHHFFK 278
+ V LVK+ K R TA + ++H + K
Sbjct: 233 EAMDFVDRLLVKERKSRMTASEALQHPWLK 262
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 132/288 (45%), Gaps = 31/288 (10%)
Query: 9 FPVDAKDYRLYEEVGEGVSATVYRALCIPLNE-------IVAIKVLDLEKCNNDLDGIRR 61
FP D L + +GEG V A + +++ VA+K+L + DL +
Sbjct: 32 FPRDK--LTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVS 89
Query: 62 EVQTMR-VTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLL 120
E++ M+ + H N++ + T L+V++ Y + G+ +++ P G E +
Sbjct: 90 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 149
Query: 121 RE---TLKALV-----------YLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFD 166
E T K LV YL IHRD+ A N+L+ N +K+ADFG++ + +
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINN 209
Query: 167 AGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMK 225
+++ N + WMAPE + Y ++D+WSFG+ E+ G +P+ P++
Sbjct: 210 IDXXKKTTNGRLPVK-WMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGI-PVE 266
Query: 226 VLLMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMK 273
L L+ G ++ + ++ C P +RPT ++L++
Sbjct: 267 ELFKLLKE---GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 133/307 (43%), Gaps = 47/307 (15%)
Query: 13 AKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR--REVQTMRVTN 70
+ D++L +GEG V A P EIVAIK +E + L +R RE++ ++
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIK--KIEPFDKPLFALRTLREIKILKHFK 67
Query: 71 HPNVLRAHC-----SFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
H N++ SF + ++++ M LH + S + + I + +TL+
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVIST--QMLSDDHIQYFIYQTLR 123
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAG-------DRQRSRNTFV 178
A+ LH IHRD+K N+LI+SN +K+ DFG++ + ++ +Q FV
Sbjct: 124 AVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFV 183
Query: 179 GTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF--SKYPPMKVLLMTLQNAPP 236
T + APEVM Y D+WS G EL F Y +L+ + P
Sbjct: 184 ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPH 243
Query: 237 G------LDYERDKRFSKSFK-------------------ELVTACLVKDPKKRPTAEKL 271
++ R + + KS +L+ LV DP KR TA++
Sbjct: 244 SDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEA 303
Query: 272 MKHHFFK 278
++H + +
Sbjct: 304 LEHPYLQ 310
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 122/261 (46%), Gaps = 32/261 (12%)
Query: 17 RLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLR 76
+L +++G G V+ A N+ + V ++ + ++ E M+ H +++
Sbjct: 185 KLEKKLGAGQFGEVWMAT---YNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVK 241
Query: 77 AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPV--IATLLRETLKALVYLHFHG 134
H + T ++++ +MA GS L +KS EG ++P+ + + + + ++
Sbjct: 242 LH-AVVTKEPIYIITEFMAKGSLLDFLKSD--EGSKQPLPKLIDFSAQIAEGMAFIEQRN 298
Query: 135 HIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPC-WMAPEVMQQLH 193
+IHRD++A NIL+ ++ K+ADFG++ R F P W APE +
Sbjct: 299 YIHRDLRAANILVSASLVCKIADFGLA----------RVGAKF---PIKWTAPEAI-NFG 344
Query: 194 GYDFKADIWSFGITALELA-HGHAPFSKYPPMK--VLLMTLQNAPPGLDYERDKRFSKSF 250
+ K+D+WSFGI +E+ +G P YP M ++ L+ G R + +
Sbjct: 345 SFTIKSDVWSFGILLMEIVTYGRIP---YPGMSNPEVIRALER---GYRMPRPENCPEEL 398
Query: 251 KELVTACLVKDPKKRPTAEKL 271
++ C P++RPT E +
Sbjct: 399 YNIMMRCWKNRPEERPTFEYI 419
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 125/288 (43%), Gaps = 38/288 (13%)
Query: 13 AKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHP 72
A D+ +G+G V +A + AIK + L I EV + NH
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIK--KIRHTEEKLSTILSEVMLLASLNHQ 62
Query: 73 NVLRAHCSF-------------TTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATL 119
V+R + ++ L++ M Y G+ ++ S + L
Sbjct: 63 YVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQ-QRDEYWRL 121
Query: 120 LRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGD--RQRSRN-- 175
R+ L+AL Y+H G IHRD+K NI ID + +K+ DFG++ + + D + S+N
Sbjct: 122 FRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLP 181
Query: 176 -------TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLL 228
+ +GT ++A EV+ Y+ K D++S GI E+ + PFS +L
Sbjct: 182 GSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNIL 238
Query: 229 MTLQNA----PPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLM 272
L++ PP D D + K K+++ + DP KRP A L+
Sbjct: 239 KKLRSVSIEFPPDFD---DNKM-KVEKKIIRLLIDHDPNKRPGARTLL 282
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 133/307 (43%), Gaps = 47/307 (15%)
Query: 13 AKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR--REVQTMRVTN 70
+ D++L +GEG V A P EIVAIK +E + L +R RE++ ++
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIK--KIEPFDKPLFALRTLREIKILKHFK 67
Query: 71 HPNVLRAHC-----SFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
H N++ SF + ++++ M LH + S + + I + +TL+
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVIST--QMLSDDHIQYFIYQTLR 123
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAG-------DRQRSRNTFV 178
A+ LH IHRD+K N+LI+SN +K+ DFG++ + ++ +Q +V
Sbjct: 124 AVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYV 183
Query: 179 GTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFS--KYPPMKVLLMTLQNAPP 236
T + APEVM Y D+WS G EL F Y +L+ + P
Sbjct: 184 ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPH 243
Query: 237 G------LDYERDKRFSKSFK-------------------ELVTACLVKDPKKRPTAEKL 271
++ R + + KS +L+ LV DP KR TA++
Sbjct: 244 SDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEA 303
Query: 272 MKHHFFK 278
++H + +
Sbjct: 304 LEHPYLQ 310
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 140/304 (46%), Gaps = 32/304 (10%)
Query: 16 YRLYEEV-GEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTM-RVTNHPN 73
Y+L E+V GEG A V + + ++ A+K+++ + + + REV+ + + H N
Sbjct: 14 YQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP-GHIRSRVFREVEMLYQCQGHRN 72
Query: 74 VLRAHCSFTTGHCLWVVMPYMAGGSCL-HIMKSAYPEGFEEPVIATLLRETLKALVYLHF 132
VL F ++V M GGS L HI K + F E + ++++ AL +LH
Sbjct: 73 VLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRH---FNELEASVVVQDVASALDFLHN 129
Query: 133 HGHIHRDVKAGNILID---SNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPC----WMA 185
G HRD+K NIL + +K+ DF + + + GD + TPC +MA
Sbjct: 130 KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMA 189
Query: 186 PEVMQQLHG----YDFKADIWSFGITALELAHGHAPF-------------SKYPPMK-VL 227
PEV++ YD + D+WS G+ L G+ PF P + +L
Sbjct: 190 PEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNML 249
Query: 228 LMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFKHARSNDFLA 287
++Q + S + K+L++ LV+D K+R +A ++++H + + + L
Sbjct: 250 FESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAPENTLP 309
Query: 288 RSIV 291
+V
Sbjct: 310 TPMV 313
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 110/239 (46%), Gaps = 21/239 (8%)
Query: 42 VAIKVLDL---EKCNNDLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGS 98
VAIK L + EK D G E M +HPN++R T + +V M GS
Sbjct: 47 VAIKTLKVGYTEKQRRDFLG---EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGS 103
Query: 99 CLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADF 158
++ + F + +LR + YL G++HRD+ A NILI+SN K++DF
Sbjct: 104 LDSFLRK-HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDF 162
Query: 159 GVSACMFDAGDRQRSRNTFVG-TPC-WMAPEVMQQLHGYDFKADIWSFGITALE-LAHGH 215
G+S + D D + + T G P W +PE + + +D+WS+GI E +++G
Sbjct: 163 GLSRVLED--DPEAAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVMSYGE 219
Query: 216 APFSKYPPMKVLLMTLQN--APPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLM 272
P+ + V+ + PP +D + +L+ C KD RP E+++
Sbjct: 220 RPYWEMSNQDVIKAVDEGYRLPPPMD------CPAALYQLMLDCWQKDRNNRPKFEQIV 272
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 110/239 (46%), Gaps = 21/239 (8%)
Query: 42 VAIKVLDL---EKCNNDLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGS 98
VAIK L + EK D G E M +HPN++R T + +V M GS
Sbjct: 76 VAIKTLKVGYTEKQRRDFLG---EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGS 132
Query: 99 CLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADF 158
++ + F + +LR + YL G++HRD+ A NILI+SN K++DF
Sbjct: 133 LDSFLRK-HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDF 191
Query: 159 GVSACMFDAGDRQRSRNTFVG-TPC-WMAPEVMQQLHGYDFKADIWSFGITALE-LAHGH 215
G+S + D D + + T G P W +PE + + +D+WS+GI E +++G
Sbjct: 192 GLSRVLED--DPEAAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVMSYGE 248
Query: 216 APFSKYPPMKVLLMTLQN--APPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLM 272
P+ + V+ + PP +D + +L+ C KD RP E+++
Sbjct: 249 RPYWEMSNQDVIKAVDEGYRLPPPMD------CPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 93/212 (43%), Gaps = 26/212 (12%)
Query: 67 RVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKA 126
+V HP +R ++ G L++ G L A+ E + LR+TL A
Sbjct: 112 KVGQHPCCVRLEQAWEEGGILYLQTELC--GPSLQQHCEAWGASLPEAQVWGYLRDTLLA 169
Query: 127 LVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAP 186
L +LH G +H DVK NI + G KL DFG+ + AG + G P +MAP
Sbjct: 170 LAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQE----GDPRYMAP 225
Query: 187 EVMQQLHGYDFKADIWSFGITALELA------HGHAPFSKYPPMKVLLMTLQNAPPGLDY 240
E++Q Y AD++S G+T LE+A HG + + + PP
Sbjct: 226 ELLQ--GSYGTAADVFSLGLTILEVACNMELPHGGEGWQQ--------LRQGYLPP---- 271
Query: 241 ERDKRFSKSFKELVTACLVKDPKKRPTAEKLM 272
E S + ++ L DPK R TAE L+
Sbjct: 272 EFTAGLSSELRSVLVMMLEPDPKLRATAEALL 303
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 122/297 (41%), Gaps = 45/297 (15%)
Query: 16 YRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR--REVQTMRVTNHPN 73
YR + VG G V A+ VAIK L ++L R RE++ ++ H N
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKL-YRPFQSELFAKRAYRELRLLKHMRHEN 85
Query: 74 VLRAHCSFTTGHCL------WVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKAL 127
V+ FT L ++VMP+M G +MK E E I L+ + LK L
Sbjct: 86 VIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKH---EKLGEDRIQFLVYQMLKGL 141
Query: 128 VYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPE 187
Y+H G IHRD+K GN+ ++ + +K+ DFG+ A V T + APE
Sbjct: 142 RYIHAAGIIHRDLKPGNLAVNEDCELKILDFGL------ARQADSEMXGXVVTRWYRAPE 195
Query: 188 VMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVL--LMTLQNAPPG-----LDY 240
V+ Y DIWS G E+ G F + L +M + PP L
Sbjct: 196 VILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQS 255
Query: 241 ERDKRFSKSFKE-------------------LVTACLVKDPKKRPTAEKLMKHHFFK 278
+ K + K E L+ LV D ++R TA + + H +F+
Sbjct: 256 DEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFE 312
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 132/290 (45%), Gaps = 35/290 (12%)
Query: 9 FPVDAKDYRLYEEVGEGVSATVYRALCIPLNE-------IVAIKVLDLEKCNNDLDGIRR 61
FP D L + +GEG V A + +++ VA+K+L + DL +
Sbjct: 32 FPRDK--LTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVS 89
Query: 62 EVQTMR-VTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLL 120
E++ M+ + H N++ + T L+V++ Y + G+ +++ P G E +
Sbjct: 90 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 149
Query: 121 RE---TLKALV-----------YLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFD 166
E T K LV YL IHRD+ A N+L+ N +K+ADFG++ D
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR---D 206
Query: 167 AGDRQRSRNTFVG-TPC-WMAPEVMQQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPP 223
+ +NT G P WMAPE + Y ++D+WSFG+ E+ G +P+ P
Sbjct: 207 INNIDYYKNTTNGRLPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGI-P 264
Query: 224 MKVLLMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMK 273
++ L L+ G ++ + ++ C P +RPT ++L++
Sbjct: 265 VEELFKLLKE---GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 154/364 (42%), Gaps = 61/364 (16%)
Query: 22 VGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAHCSF 81
+G G V++A + +E+ KVL ++ N RE+Q MR+ HPNV+ F
Sbjct: 48 IGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKN------RELQIMRIVKHPNVVDLKAFF 101
Query: 82 TTG---------HCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHF 132
+ + + +P + H K + +I + + L++L Y+H
Sbjct: 102 YSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLK--QTMPMLLIKLYMYQLLRSLAYIHS 159
Query: 133 HGHIHRDVKAGNILID-SNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQ 191
G HRD+K N+L+D +G +KL DFG SA + AG+ S + + + APE++
Sbjct: 160 IGICHRDIKPQNLLLDPPSGVLKLIDFG-SAKILIAGEPNVSX---ICSRYYRAPELIFG 215
Query: 192 LHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNA------------PPGLD 239
Y DIWS G EL G F + L+ ++ P ++
Sbjct: 216 ATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYME 275
Query: 240 YE----RDKRFSKSFK--------ELVTACLVKDPKKRPTAEKLMKHHFFKHARSNDFLA 287
++ R FSK F+ +L++ L P R TA + + H FF R+ + A
Sbjct: 276 HKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELRTGE--A 333
Query: 288 RSIVDN---LAPLGERFRMLKAKEADLLVQNKALYEDKEQLSQQEYIRGISAWNFN---L 341
R + N L PL + + DL+ + + + E LS RGI NF L
Sbjct: 334 R--MPNGRELPPLFNWTKEELSVRPDLISRLVPQHAEAELLS-----RGIDVHNFQPIPL 386
Query: 342 EDLK 345
E LK
Sbjct: 387 ESLK 390
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 107/243 (44%), Gaps = 11/243 (4%)
Query: 42 VAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLH 101
VAIKVL D + + RE Q M ++P ++R L +VM MAGG LH
Sbjct: 40 VAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRL-IGVCQAEALMLVME-MAGGGPLH 97
Query: 102 IMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVS 161
E +A LL + + YL +HRD+ A N+L+ + K++DFG+S
Sbjct: 98 KFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLS 157
Query: 162 ACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALE-LAHGHAPFSK 220
+ +R+ W APE + + ++D+WS+G+T E L++G P+ K
Sbjct: 158 KALGADDSYYTARSAGKWPLKWYAPECI-NFRKFSSRSDVWSYGVTMWEALSYGQKPYKK 216
Query: 221 YPPMKVLLMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRP---TAEKLMKHHFF 277
+V+ Q G E L++ C + + RP T E+ M+ ++
Sbjct: 217 MKGPEVMAFIEQ----GKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYY 272
Query: 278 KHA 280
A
Sbjct: 273 SLA 275
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 132/288 (45%), Gaps = 31/288 (10%)
Query: 9 FPVDAKDYRLYEEVGEGVSATVYRALCIPLNE-------IVAIKVLDLEKCNNDLDGIRR 61
FP D L + +GEG V A + +++ VA+K+L + DL +
Sbjct: 32 FPRDK--LTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVS 89
Query: 62 EVQTMR-VTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLL 120
E++ M+ + H N++ + T L+V++ Y + G+ +++ P G E +
Sbjct: 90 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRV 149
Query: 121 RE---TLKALV-----------YLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFD 166
E T K LV YL IHRD+ A N+L+ N +K+ADFG++ + +
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINN 209
Query: 167 AGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMK 225
+++ N + WMAPE + Y ++D+WSFG+ E+ G +P+ P++
Sbjct: 210 IDYYKKTTNGRLPVK-WMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGI-PVE 266
Query: 226 VLLMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMK 273
L L+ G ++ + ++ C P +RPT ++L++
Sbjct: 267 ELFKLLKE---GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 126/270 (46%), Gaps = 22/270 (8%)
Query: 9 FPVDAKDYRLYEEVGEGVSATV----YRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQ 64
+ +D KD +E+G G V +R VAIK++ ++ + D E +
Sbjct: 19 WEIDPKDLTFLKELGTGQFGVVKYGKWRG-----QYDVAIKMI--KEGSMSEDEFIEEAK 71
Query: 65 TMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETL 124
M +H +++ + T ++++ YMA G L+ ++ F+ + + ++
Sbjct: 72 VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM-RHRFQTQQLLEMCKDVC 130
Query: 125 KALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPC-W 183
+A+ YL +HRD+ A N L++ G +K++DFG+S + D + + F P W
Sbjct: 131 EAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKF---PVRW 187
Query: 184 MAPEVMQQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYER 242
PEV+ + K+DIW+FG+ E+ + G P+ ++ + T ++ GL R
Sbjct: 188 SPPEVL-MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE----TAEHIAQGLRLYR 242
Query: 243 DKRFSKSFKELVTACLVKDPKKRPTAEKLM 272
S+ ++ +C + +RPT + L+
Sbjct: 243 PHLASEKVYTIMYSCWHEKADERPTFKILL 272
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 122/288 (42%), Gaps = 31/288 (10%)
Query: 16 YRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR-REVQTMRVTNHPNV 74
Y E++GEG VY+A E A+K + LEK + + RE+ ++ H N+
Sbjct: 4 YHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNI 62
Query: 75 LRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHG 134
++ + T L +V ++ L + G E + L + L + Y H
Sbjct: 63 VKLYDVIHTKKRLVLVFEHL--DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR 120
Query: 135 HIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLHG 194
+HRD+K N+LI+ G +K+ADFG++ G R V T + AP+V+
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAF---GIPVRKYTHEVVTLWYRAPDVLMGSKK 177
Query: 195 YDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTL--------QNAP-----PGLD-- 239
Y DIWS G E+ +G F L+ +N P P D
Sbjct: 178 YSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPN 237
Query: 240 ---YE------RDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFK 278
YE K +S +L++ L DP +R TA++ ++H +FK
Sbjct: 238 FTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 122/288 (42%), Gaps = 31/288 (10%)
Query: 16 YRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR-REVQTMRVTNHPNV 74
Y E++GEG VY+A E A+K + LEK + + RE+ ++ H N+
Sbjct: 4 YHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNI 62
Query: 75 LRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHG 134
++ + T L +V ++ L + G E + L + L + Y H
Sbjct: 63 VKLYDVIHTKKRLVLVFEHL--DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR 120
Query: 135 HIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLHG 194
+HRD+K N+LI+ G +K+ADFG++ G R V T + AP+V+
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAF---GIPVRKYTHEVVTLWYRAPDVLMGSKK 177
Query: 195 YDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTL--------QNAP-----PGLD-- 239
Y DIWS G E+ +G F L+ +N P P D
Sbjct: 178 YSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPN 237
Query: 240 ---YE------RDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFK 278
YE K +S +L++ L DP +R TA++ ++H +FK
Sbjct: 238 FTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 132/288 (45%), Gaps = 31/288 (10%)
Query: 9 FPVDAKDYRLYEEVGEGVSATVYRALCIPLNE-------IVAIKVLDLEKCNNDLDGIRR 61
FP D L + +GEG V A + +++ VA+K+L + DL +
Sbjct: 32 FPRDK--LTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVS 89
Query: 62 EVQTMR-VTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLL 120
E++ M+ + H N++ + T L+V++ Y + G+ +++ P G E +
Sbjct: 90 EMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 149
Query: 121 RE---TLKALV-----------YLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFD 166
E T K LV YL IHRD+ A N+L+ N +K+ADFG++ + +
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINN 209
Query: 167 AGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMK 225
+++ N + WMAPE + Y ++D+WSFG+ E+ G +P+ P++
Sbjct: 210 IDYYKKTTNGRLPVK-WMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGI-PVE 266
Query: 226 VLLMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMK 273
L L+ G ++ + ++ C P +RPT ++L++
Sbjct: 267 ELFKLLKE---GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 123/269 (45%), Gaps = 20/269 (7%)
Query: 5 VEKRFPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKC---NNDLDGIRR 61
VE + D+ ++ +G G VY ++ A+K LD ++ + +
Sbjct: 179 VELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNE 238
Query: 62 EVQTMRVT--NHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATL 119
+ V+ + P ++ +F T L ++ M GG LH S + F E +
Sbjct: 239 RIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGD-LHYHLSQHG-VFSEADMRFY 296
Query: 120 LRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVG 179
E + L ++H ++RD+K NIL+D +G ++++D G+ AC F ++ + VG
Sbjct: 297 AAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGL-ACDFS----KKKPHASVG 351
Query: 180 TPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPM---KVLLMTLQNAPP 236
T +MAPEV+Q+ YD AD +S G +L GH+PF ++ ++ MTL A
Sbjct: 352 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA-- 409
Query: 237 GLDYERDKRFSKSFKELVTACLVKDPKKR 265
E FS + L+ L +D +R
Sbjct: 410 ---VELPDSFSPELRSLLEGLLQRDVNRR 435
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 126/297 (42%), Gaps = 38/297 (12%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLN-EIVAIKVLDLEKCNNDLD-GIRREVQTMR---V 68
+ Y E+GEG V++A + VA+K + ++ + REV +R
Sbjct: 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLET 70
Query: 69 TNHPNVLRAHCSFTTGHC-----LWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRET 123
HPNV+R T L +V ++ ++ K P G I ++ +
Sbjct: 71 FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEP-GVPTETIKDMMFQL 129
Query: 124 LKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCW 183
L+ L +LH H +HRD+K NIL+ S+G IKLADFG++ Q + + V T +
Sbjct: 130 LRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY----SFQMALTSVVVTLWY 185
Query: 184 MAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVL--LMTLQNAPPGLDYE 241
APEV+ Q Y D+WS G E+ F + L ++ + P D+
Sbjct: 186 RAPEVLLQ-SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP 244
Query: 242 RD----------------KRFSKSF----KELVTACLVKDPKKRPTAEKLMKHHFFK 278
RD ++F K+L+ CL +P KR +A + H +F+
Sbjct: 245 RDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 132/288 (45%), Gaps = 31/288 (10%)
Query: 9 FPVDAKDYRLYEEVGEGVSATVYRALCIPLNE-------IVAIKVLDLEKCNNDLDGIRR 61
FP D L + +GEG V A + +++ VA+K+L + DL +
Sbjct: 78 FPRDK--LTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVS 135
Query: 62 EVQTMR-VTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLL 120
E++ M+ + H N++ + T L+V++ Y + G+ +++ P G E +
Sbjct: 136 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 195
Query: 121 RE---TLKALV-----------YLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFD 166
E T K LV YL IHRD+ A N+L+ N +K+ADFG++ + +
Sbjct: 196 PEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINN 255
Query: 167 AGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMK 225
+++ N + WMAPE + Y ++D+WSFG+ E+ G +P+ P++
Sbjct: 256 IDYYKKTTNGRLPVK-WMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGI-PVE 312
Query: 226 VLLMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMK 273
L L+ G ++ + ++ C P +RPT ++L++
Sbjct: 313 ELFKLLKE---GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 357
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 132/288 (45%), Gaps = 31/288 (10%)
Query: 9 FPVDAKDYRLYEEVGEGVSATVYRALCIPLNE-------IVAIKVLDLEKCNNDLDGIRR 61
FP D L + +GEG V A + +++ VA+K+L + DL +
Sbjct: 32 FPRDK--LTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVS 89
Query: 62 EVQTMR-VTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLL 120
E++ M+ + H N++ + T L+V++ Y + G+ +++ P G E +
Sbjct: 90 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 149
Query: 121 RE---TLKALV-----------YLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFD 166
E T K LV YL IHRD+ A N+L+ N +K+ADFG++ + +
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINN 209
Query: 167 AGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMK 225
+++ N + WMAPE + Y ++D+WSFG+ E+ G +P+ P++
Sbjct: 210 IDYYKKTTNGRLPVK-WMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGI-PVE 266
Query: 226 VLLMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMK 273
L L+ G ++ + ++ C P +RPT ++L++
Sbjct: 267 ELFKLLKE---GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 123/269 (45%), Gaps = 20/269 (7%)
Query: 5 VEKRFPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKC---NNDLDGIRR 61
VE + D+ ++ +G G VY ++ A+K LD ++ + +
Sbjct: 180 VELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNE 239
Query: 62 EVQTMRVT--NHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATL 119
+ V+ + P ++ +F T L ++ M GG LH S + F E +
Sbjct: 240 RIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGD-LHYHLSQHG-VFSEADMRFY 297
Query: 120 LRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVG 179
E + L ++H ++RD+K NIL+D +G ++++D G+ AC F ++ + VG
Sbjct: 298 AAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGL-ACDFS----KKKPHASVG 352
Query: 180 TPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPM---KVLLMTLQNAPP 236
T +MAPEV+Q+ YD AD +S G +L GH+PF ++ ++ MTL A
Sbjct: 353 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA-- 410
Query: 237 GLDYERDKRFSKSFKELVTACLVKDPKKR 265
E FS + L+ L +D +R
Sbjct: 411 ---VELPDSFSPELRSLLEGLLQRDVNRR 436
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 132/288 (45%), Gaps = 31/288 (10%)
Query: 9 FPVDAKDYRLYEEVGEGVSATVYRALCIPLNE-------IVAIKVLDLEKCNNDLDGIRR 61
FP D L + +GEG V A + +++ VA+K+L + DL +
Sbjct: 21 FPRDK--LTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVS 78
Query: 62 EVQTMR-VTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLL 120
E++ M+ + H N++ + T L+V++ Y + G+ +++ P G E +
Sbjct: 79 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 138
Query: 121 RE---TLKALV-----------YLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFD 166
E T K LV YL IHRD+ A N+L+ N +K+ADFG++ + +
Sbjct: 139 PEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINN 198
Query: 167 AGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMK 225
+++ N + WMAPE + Y ++D+WSFG+ E+ G +P+ P++
Sbjct: 199 IDYYKKTTNGRLPVK-WMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGI-PVE 255
Query: 226 VLLMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMK 273
L L+ G ++ + ++ C P +RPT ++L++
Sbjct: 256 ELFKLLKE---GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 300
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 132/288 (45%), Gaps = 31/288 (10%)
Query: 9 FPVDAKDYRLYEEVGEGVSATVYRALCIPLNE-------IVAIKVLDLEKCNNDLDGIRR 61
FP D L + +GEG V A + +++ VA+K+L + DL +
Sbjct: 24 FPRDK--LTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVS 81
Query: 62 EVQTMR-VTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLL 120
E++ M+ + H N++ + T L+V++ Y + G+ +++ P G E +
Sbjct: 82 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 141
Query: 121 RE---TLKALV-----------YLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFD 166
E T K LV YL IHRD+ A N+L+ N +K+ADFG++ + +
Sbjct: 142 PEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINN 201
Query: 167 AGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMK 225
+++ N + WMAPE + Y ++D+WSFG+ E+ G +P+ P++
Sbjct: 202 IDYYKKTTNGRLPVK-WMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGI-PVE 258
Query: 226 VLLMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMK 273
L L+ G ++ + ++ C P +RPT ++L++
Sbjct: 259 ELFKLLKE---GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 303
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 132/288 (45%), Gaps = 31/288 (10%)
Query: 9 FPVDAKDYRLYEEVGEGVSATVYRALCIPLNE-------IVAIKVLDLEKCNNDLDGIRR 61
FP D L + +GEG V A + +++ VA+K+L + DL +
Sbjct: 32 FPRDK--LTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVS 89
Query: 62 EVQTMR-VTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLL 120
E++ M+ + H N++ + T L+V++ Y + G+ +++ P G E +
Sbjct: 90 EMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 149
Query: 121 RE---TLKALV-----------YLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFD 166
E T K LV YL IHRD+ A N+L+ N +K+ADFG++ + +
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINN 209
Query: 167 AGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMK 225
+++ N + WMAPE + Y ++D+WSFG+ E+ G +P+ P++
Sbjct: 210 IDYYKKTTNGRLPVK-WMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGI-PVE 266
Query: 226 VLLMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMK 273
L L+ G ++ + ++ C P +RPT ++L++
Sbjct: 267 ELFKLLKE---GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 132/288 (45%), Gaps = 31/288 (10%)
Query: 9 FPVDAKDYRLYEEVGEGVSATVYRALCIPLNE-------IVAIKVLDLEKCNNDLDGIRR 61
FP D L + +GEG V A + +++ VA+K+L + DL +
Sbjct: 32 FPRDK--LTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVS 89
Query: 62 EVQTMR-VTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLL 120
E++ M+ + H N++ + T L+V++ Y + G+ +++ P G E +
Sbjct: 90 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRV 149
Query: 121 RE---TLKALV-----------YLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFD 166
E T K LV YL IHRD+ A N+L+ N +K+ADFG++ + +
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINN 209
Query: 167 AGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMK 225
+++ N + WMAPE + Y ++D+WSFG+ E+ G +P+ P++
Sbjct: 210 IDYYKKTTNGRLPVK-WMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGI-PVE 266
Query: 226 VLLMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMK 273
L L+ G ++ + ++ C P +RPT ++L++
Sbjct: 267 ELFKLLKE---GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 129/291 (44%), Gaps = 37/291 (12%)
Query: 4 VVEKRFPVDAKDYRLYEEVGEGVSATVYRALCIPLN----EIVAIKVLDLEKCNNDL-DG 58
V KR+ +D +GEG V P N E+VA+K L E C L G
Sbjct: 5 VFHKRYLKKIRD------LGEGHFGKVSLYCYDPTNDGTGEMVAVKALK-EGCGPQLRSG 57
Query: 59 IRREVQTMRVTNHPNVLR--AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPE---GFEE 113
+RE++ +R H ++++ C + +VM Y+ GS ++ P G +
Sbjct: 58 WQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGS----LRDYLPRHCVGLAQ 113
Query: 114 PVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRS 173
++ ++ + + YLH +IHR + A N+L+D++ +K+ DFG++ + + + R
Sbjct: 114 LLL--FAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRV 171
Query: 174 RNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELA----HGHAPFSKYPP------ 223
R W APE +++ Y + +D+WSFG+T EL +P +K+
Sbjct: 172 REDGDSPVFWYAPECLKECKFY-YASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQ 230
Query: 224 --MKVLLMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLM 272
M VL +T + G R R L+ C + RPT + L+
Sbjct: 231 GQMTVLRLT-ELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLV 280
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 94/192 (48%), Gaps = 15/192 (7%)
Query: 80 SFTTGHCLWVVMPYMAGGSCLHIMKSAYPE--GFEEPVIATLLRETLKALVYLHFHGHIH 137
+F T L +VM M GG + + + + GF+EP + + L +LH I+
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIY 312
Query: 138 RDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLHGYDF 197
RD+K N+L+D +G ++++D G+ A AG Q + GTP +MAPE++ YDF
Sbjct: 313 RDLKPENVLLDDDGNVRISDLGL-AVELKAG--QTKTKGYAGTPGFMAPELLLG-EEYDF 368
Query: 198 KADIWSFGITALELAHGHAPF----SKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKEL 253
D ++ G+T E+ PF K ++ L+ A D +FS + K+
Sbjct: 369 SVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPD-----KFSPASKDF 423
Query: 254 VTACLVKDPKKR 265
A L KDP+KR
Sbjct: 424 CEALLQKDPEKR 435
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 132/288 (45%), Gaps = 31/288 (10%)
Query: 9 FPVDAKDYRLYEEVGEGVSATVYRALCIPLNE-------IVAIKVLDLEKCNNDLDGIRR 61
FP D L + +GEG V A + +++ VA+K+L + DL +
Sbjct: 19 FPRDK--LTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVS 76
Query: 62 EVQTMR-VTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLL 120
E++ M+ + H N++ + T L+V++ Y + G+ +++ P G E +
Sbjct: 77 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 136
Query: 121 RE---TLKALV-----------YLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFD 166
E T K LV YL IHRD+ A N+L+ N +K+ADFG++ + +
Sbjct: 137 PEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINN 196
Query: 167 AGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMK 225
+++ N + WMAPE + Y ++D+WSFG+ E+ G +P+ P++
Sbjct: 197 IDYYKKTTNGRLPVK-WMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGI-PVE 253
Query: 226 VLLMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMK 273
L L+ G ++ + ++ C P +RPT ++L++
Sbjct: 254 ELFKLLKE---GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 298
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 94/192 (48%), Gaps = 15/192 (7%)
Query: 80 SFTTGHCLWVVMPYMAGGSCLHIMKSAYPE--GFEEPVIATLLRETLKALVYLHFHGHIH 137
+F T L +VM M GG + + + + GF+EP + + L +LH I+
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIY 312
Query: 138 RDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLHGYDF 197
RD+K N+L+D +G ++++D G+ A AG Q + GTP +MAPE++ YDF
Sbjct: 313 RDLKPENVLLDDDGNVRISDLGL-AVELKAG--QTKTKGYAGTPGFMAPELLLG-EEYDF 368
Query: 198 KADIWSFGITALELAHGHAPF----SKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKEL 253
D ++ G+T E+ PF K ++ L+ A D +FS + K+
Sbjct: 369 SVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPD-----KFSPASKDF 423
Query: 254 VTACLVKDPKKR 265
A L KDP+KR
Sbjct: 424 CEALLQKDPEKR 435
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 122/288 (42%), Gaps = 31/288 (10%)
Query: 16 YRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR-REVQTMRVTNHPNV 74
Y E++GEG VY+A E A+K + LEK + + RE+ ++ H N+
Sbjct: 4 YHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNI 62
Query: 75 LRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHG 134
++ + T L +V ++ L + G E + L + L + Y H
Sbjct: 63 VKLYDVIHTKKRLVLVFEHL--DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR 120
Query: 135 HIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLHG 194
+HRD+K N+LI+ G +K+ADFG++ G R + T + AP+V+
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAF---GIPVRKYTHEIVTLWYRAPDVLMGSKK 177
Query: 195 YDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTL--------QNAP-----PGLD-- 239
Y DIWS G E+ +G F L+ +N P P D
Sbjct: 178 YSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPN 237
Query: 240 ---YE------RDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFK 278
YE K +S +L++ L DP +R TA++ ++H +FK
Sbjct: 238 FTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 129/291 (44%), Gaps = 37/291 (12%)
Query: 4 VVEKRFPVDAKDYRLYEEVGEGVSATVYRALCIPLN----EIVAIKVLDLEKCNNDL-DG 58
V KR+ +D +GEG V P N E+VA+K L E C L G
Sbjct: 4 VFHKRYLKKIRD------LGEGHFGKVSLYCYDPTNDGTGEMVAVKALK-EGCGPQLRSG 56
Query: 59 IRREVQTMRVTNHPNVLR--AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPE---GFEE 113
+RE++ +R H ++++ C + +VM Y+ GS ++ P G +
Sbjct: 57 WQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGS----LRDYLPRHCVGLAQ 112
Query: 114 PVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRS 173
++ ++ + + YLH +IHR + A N+L+D++ +K+ DFG++ + + + R
Sbjct: 113 LLL--FAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRV 170
Query: 174 RNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELA----HGHAPFSKYPP------ 223
R W APE +++ Y + +D+WSFG+T EL +P +K+
Sbjct: 171 REDGDSPVFWYAPECLKECKFY-YASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQ 229
Query: 224 --MKVLLMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLM 272
M VL +T + G R R L+ C + RPT + L+
Sbjct: 230 GQMTVLRLT-ELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLV 279
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 107/243 (44%), Gaps = 11/243 (4%)
Query: 42 VAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLH 101
VAIKVL D + + RE Q M ++P ++R L +VM MAGG LH
Sbjct: 366 VAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRL-IGVCQAEALMLVME-MAGGGPLH 423
Query: 102 IMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVS 161
E +A LL + + YL +HR++ A N+L+ + K++DFG+S
Sbjct: 424 KFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLS 483
Query: 162 ACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALE-LAHGHAPFSK 220
+ +R+ W APE + + ++D+WS+G+T E L++G P+ K
Sbjct: 484 KALGADDSYYTARSAGKWPLKWYAPECI-NFRKFSSRSDVWSYGVTMWEALSYGQKPYKK 542
Query: 221 YPPMKVLLMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRP---TAEKLMKHHFF 277
+V+ Q G E L++ C + + RP T E+ M+ ++
Sbjct: 543 MKGPEVMAFIEQ----GKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYY 598
Query: 278 KHA 280
A
Sbjct: 599 SLA 601
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 109/239 (45%), Gaps = 21/239 (8%)
Query: 42 VAIKVLDL---EKCNNDLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGS 98
VAIK L + EK D G E M +HPN++R T + +V M GS
Sbjct: 76 VAIKTLKVGYTEKQRRDFLG---EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGS 132
Query: 99 CLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADF 158
++ + F + +LR + YL G +HRD+ A NILI+SN K++DF
Sbjct: 133 LDSFLRK-HDAQFTVIQLVGMLRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDF 191
Query: 159 GVSACMFDAGDRQRSRNTFVG-TPC-WMAPEVMQQLHGYDFKADIWSFGITALE-LAHGH 215
G+S + D D + + T G P W +PE + + +D+WS+GI E +++G
Sbjct: 192 GLSRVLED--DPEAAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVMSYGE 248
Query: 216 APFSKYPPMKVLLMTLQN--APPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLM 272
P+ + V+ + PP +D + +L+ C KD RP E+++
Sbjct: 249 RPYWEMSNQDVIKAVDEGYRLPPPMD------CPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 133/307 (43%), Gaps = 47/307 (15%)
Query: 13 AKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR--REVQTMRVTN 70
+ D++L +GEG V A P EIVAIK +E + L +R RE++ ++
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIK--KIEPFDKPLFALRTLREIKILKHFK 67
Query: 71 HPNVLRAHC-----SFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
H N++ SF + ++++ M LH + S + + I + +TL+
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVIST--QMLSDDHIQYFIYQTLR 123
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAG-------DRQRSRNTFV 178
A+ LH IHRD+K N+LI+SN +K+ DFG++ + ++ +Q V
Sbjct: 124 AVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXV 183
Query: 179 GTPCWMAPEVMQQLHGYDFKADIWSFG--ITALELAHGHAPFSKYPPMKVLLMTLQNAPP 236
T + APEVM Y D+WS G + L L P Y +L+ + P
Sbjct: 184 ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPH 243
Query: 237 G------LDYERDKRFSKSFK-------------------ELVTACLVKDPKKRPTAEKL 271
++ R + + KS +L+ LV DP KR TA++
Sbjct: 244 SDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEA 303
Query: 272 MKHHFFK 278
++H + +
Sbjct: 304 LEHPYLQ 310
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 94/192 (48%), Gaps = 15/192 (7%)
Query: 80 SFTTGHCLWVVMPYMAGGSCLHIMKSAYPE--GFEEPVIATLLRETLKALVYLHFHGHIH 137
+F T L +VM M GG + + + + GF+EP + + L +LH I+
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIY 312
Query: 138 RDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLHGYDF 197
RD+K N+L+D +G ++++D G+ A AG Q + GTP +MAPE++ YDF
Sbjct: 313 RDLKPENVLLDDDGNVRISDLGL-AVELKAG--QTKTKGYAGTPGFMAPELLLG-EEYDF 368
Query: 198 KADIWSFGITALELAHGHAPF----SKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKEL 253
D ++ G+T E+ PF K ++ L+ A D +FS + K+
Sbjct: 369 SVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPD-----KFSPASKDF 423
Query: 254 VTACLVKDPKKR 265
A L KDP+KR
Sbjct: 424 CEALLQKDPEKR 435
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 123/269 (45%), Gaps = 20/269 (7%)
Query: 5 VEKRFPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKC---NNDLDGIRR 61
VE + D+ ++ +G G VY ++ A+K LD ++ + +
Sbjct: 180 VELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNE 239
Query: 62 EVQTMRVT--NHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATL 119
+ V+ + P ++ +F T L ++ M GG LH S + F E +
Sbjct: 240 RIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGD-LHYHLSQHG-VFSEADMRFY 297
Query: 120 LRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVG 179
E + L ++H ++RD+K NIL+D +G ++++D G+ AC F ++ + VG
Sbjct: 298 AAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGL-ACDFS----KKKPHASVG 352
Query: 180 TPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPM---KVLLMTLQNAPP 236
T +MAPEV+Q+ YD AD +S G +L GH+PF ++ ++ MTL A
Sbjct: 353 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA-- 410
Query: 237 GLDYERDKRFSKSFKELVTACLVKDPKKR 265
E FS + L+ L +D +R
Sbjct: 411 ---VELPDSFSPELRSLLEGLLQRDVNRR 436
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 123/269 (45%), Gaps = 20/269 (7%)
Query: 5 VEKRFPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKC---NNDLDGIRR 61
VE + D+ ++ +G G VY ++ A+K LD ++ + +
Sbjct: 180 VELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNE 239
Query: 62 EVQTMRVT--NHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATL 119
+ V+ + P ++ +F T L ++ M GG LH S + F E +
Sbjct: 240 RIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGD-LHYHLSQHG-VFSEADMRFY 297
Query: 120 LRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVG 179
E + L ++H ++RD+K NIL+D +G ++++D G+ AC F ++ + VG
Sbjct: 298 AAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGL-ACDFS----KKKPHASVG 352
Query: 180 TPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPM---KVLLMTLQNAPP 236
T +MAPEV+Q+ YD AD +S G +L GH+PF ++ ++ MTL A
Sbjct: 353 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA-- 410
Query: 237 GLDYERDKRFSKSFKELVTACLVKDPKKR 265
E FS + L+ L +D +R
Sbjct: 411 ---VELPDSFSPELRSLLEGLLQRDVNRR 436
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 132/288 (45%), Gaps = 31/288 (10%)
Query: 9 FPVDAKDYRLYEEVGEGVSATVYRALCIPLNE-------IVAIKVLDLEKCNNDLDGIRR 61
FP D L + +GEG V A + +++ VA+K+L + DL +
Sbjct: 32 FPRDK--LTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVS 89
Query: 62 EVQTMR-VTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLL 120
E++ M+ + H N++ + T L+V++ Y + G+ +++ P G E +
Sbjct: 90 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 149
Query: 121 RE---TLKALV-----------YLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFD 166
E T K LV YL IHRD+ A N+L+ N +++ADFG++ + +
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINN 209
Query: 167 AGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMK 225
+++ N + WMAPE + Y ++D+WSFG+ E+ G +P+ P++
Sbjct: 210 IDYYKKTTNGRLPVK-WMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGI-PVE 266
Query: 226 VLLMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMK 273
L L+ G ++ + ++ C P +RPT ++L++
Sbjct: 267 ELFKLLKE---GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 126/297 (42%), Gaps = 38/297 (12%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIP-LNEIVAIKVLDLEKCNNDLD-GIRREVQTMR---V 68
+ Y E+GEG V++A + VA+K + ++ + REV +R
Sbjct: 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLET 70
Query: 69 TNHPNVLRAHCSFTTGHC-----LWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRET 123
HPNV+R T L +V ++ ++ K P G I ++ +
Sbjct: 71 FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEP-GVPTETIKDMMFQL 129
Query: 124 LKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCW 183
L+ L +LH H +HRD+K NIL+ S+G IKLADFG++ Q + + V T +
Sbjct: 130 LRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY----SFQMALTSVVVTLWY 185
Query: 184 MAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVL--LMTLQNAPPGLDYE 241
APEV+ Q Y D+WS G E+ F + L ++ + P D+
Sbjct: 186 RAPEVLLQ-SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP 244
Query: 242 RD----------------KRFSKSF----KELVTACLVKDPKKRPTAEKLMKHHFFK 278
RD ++F K+L+ CL +P KR +A + H +F+
Sbjct: 245 RDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 126/297 (42%), Gaps = 38/297 (12%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIP-LNEIVAIKVLDLEKCNNDLD-GIRREVQTMR---V 68
+ Y E+GEG V++A + VA+K + ++ + REV +R
Sbjct: 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLET 70
Query: 69 TNHPNVLRAHCSFTTGHC-----LWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRET 123
HPNV+R T L +V ++ ++ K P G I ++ +
Sbjct: 71 FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEP-GVPTETIKDMMFQL 129
Query: 124 LKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCW 183
L+ L +LH H +HRD+K NIL+ S+G IKLADFG++ Q + + V T +
Sbjct: 130 LRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY----SFQMALTSVVVTLWY 185
Query: 184 MAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVL--LMTLQNAPPGLDYE 241
APEV+ Q Y D+WS G E+ F + L ++ + P D+
Sbjct: 186 RAPEVLLQ-SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP 244
Query: 242 RD----------------KRFSKSF----KELVTACLVKDPKKRPTAEKLMKHHFFK 278
RD ++F K+L+ CL +P KR +A + H +F+
Sbjct: 245 RDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 94/192 (48%), Gaps = 15/192 (7%)
Query: 80 SFTTGHCLWVVMPYMAGGSCLHIMKSAYPE--GFEEPVIATLLRETLKALVYLHFHGHIH 137
+F T L +VM M GG + + + + GF+EP + + L +LH I+
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIY 312
Query: 138 RDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLHGYDF 197
RD+K N+L+D +G ++++D G+ A AG Q + GTP +MAPE++ YDF
Sbjct: 313 RDLKPENVLLDDDGNVRISDLGL-AVELKAG--QTKTKGYAGTPGFMAPELLLG-EEYDF 368
Query: 198 KADIWSFGITALELAHGHAPF----SKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKEL 253
D ++ G+T E+ PF K ++ L+ A D +FS + K+
Sbjct: 369 SVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPD-----KFSPASKDF 423
Query: 254 VTACLVKDPKKR 265
A L KDP+KR
Sbjct: 424 CEALLQKDPEKR 435
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 109/257 (42%), Gaps = 13/257 (5%)
Query: 17 RLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLR 76
+L +++G G V+ N + V L+ + E M+ H ++R
Sbjct: 15 KLVKKLGAGQFGEVWMGY---YNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVR 71
Query: 77 AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHI 136
+ T ++++ +MA GS L +KS P + + + + Y+ +I
Sbjct: 72 LYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYI 131
Query: 137 HRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPC-WMAPEVMQQLHGY 195
HRD++A N+L+ + K+ADFG++ + D R F P W APE + +
Sbjct: 132 HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKF---PIKWTAPEAI-NFGCF 187
Query: 196 DFKADIWSFGITALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKELV 254
K+++WSFGI E+ +G P+ P + + G R + +++
Sbjct: 188 TIKSNVWSFGILLYEIVTYGKIPY----PGRTNADVMSALSQGYRMPRMENCPDELYDIM 243
Query: 255 TACLVKDPKKRPTAEKL 271
C + ++RPT + L
Sbjct: 244 KMCWKEKAEERPTFDYL 260
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 122/298 (40%), Gaps = 35/298 (11%)
Query: 16 YRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLD-GIRREVQTMR---VTNH 71
Y E+G G TVY+A VA+K + + L REV +R H
Sbjct: 6 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEH 65
Query: 72 PNVLRAH--CSFT-TGHCLWVVMPYMAGGSCLHI-MKSAYPEGFEEPVIATLLRETLKAL 127
PNV+R C+ + T + V + + L + A P G I L+R+ L+ L
Sbjct: 66 PNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGL 125
Query: 128 VYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPE 187
+LH + +HRD+K NIL+ S G +KLADFG++ Q + + V T + APE
Sbjct: 126 DFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIY----SYQMALDPVVVTLWYRAPE 181
Query: 188 VMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVL--LMTLQNAPPGLDYERDKR 245
V+ Q Y D+WS G E+ F L + L PP D+ RD
Sbjct: 182 VLLQ-STYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVS 240
Query: 246 FSK--------------------SFKELVTACLVKDPKKRPTAEKLMKHHFFKHARSN 283
+ S +L+ L +P KR +A + ++H + N
Sbjct: 241 LPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEGN 298
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 123/306 (40%), Gaps = 34/306 (11%)
Query: 1 MDLVVEKRFPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDL--DG 58
+DL E + + Y VGEG V + IVAIK LE ++ +
Sbjct: 12 VDLGTENLYFQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKF-LESDDDKMVKKI 70
Query: 59 IRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIAT 118
RE++ ++ H N++ W ++ + L ++ +P G + V+
Sbjct: 71 AMREIKLLKQLRHENLVNL-LEVCKKKKRWYLVFEFVDHTILDDLE-LFPNGLDYQVVQK 128
Query: 119 LLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFV 178
L + + + + H H IHRD+K NIL+ +G +KL DFG + + G+ V
Sbjct: 129 YLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDE---V 185
Query: 179 GTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF---SKYPPMKVLLMTLQNAP 235
T + APE++ Y D+W+ G E+ G F S + ++M L N
Sbjct: 186 ATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLI 245
Query: 236 P-------------GLDY----------ERDKRFSKSFKELVTACLVKDPKKRPTAEKLM 272
P G+ R + S+ +L CL DP KRP +L+
Sbjct: 246 PRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELL 305
Query: 273 KHHFFK 278
H FF+
Sbjct: 306 HHDFFQ 311
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 104/227 (45%), Gaps = 18/227 (7%)
Query: 59 IRREVQTMRVTNHPNVLRAHCSFTT--GHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVI 116
+++E+Q +R H NV++ +++VM Y G + M + PE PV
Sbjct: 53 VKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG--MQEMLDSVPEK-RFPVC 109
Query: 117 AT--LLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACM--FDAGDRQR 172
+ + L YLH G +H+D+K GN+L+ + G +K++ GV+ + F A D R
Sbjct: 110 QAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCR 169
Query: 173 SRNTFVGTPCWMAPEVMQQLHGYD-FKADIWSFGITALELAHGHAPFSKYPPMKVLLMTL 231
+ G+P + PE+ L + FK DIWS G+T + G PF K+
Sbjct: 170 TSQ---GSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKL----F 222
Query: 232 QNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFK 278
+N G Y +L+ L +P KR + ++ +H +F+
Sbjct: 223 ENIGKG-SYAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFR 268
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 124/287 (43%), Gaps = 36/287 (12%)
Query: 13 AKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHP 72
A D+ +G+G V +A + AIK + L I EV + NH
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIK--KIRHTEEKLSTILSEVMLLASLNHQ 62
Query: 73 NVLRAHCSFTTGHCLWVVMPYMAGGSCLHIM------KSAYPEGFEEPV------IATLL 120
V+R + ++ M + S L I ++ Y E + L
Sbjct: 63 YVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLF 122
Query: 121 RETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGD--RQRSRN--- 175
R+ L+AL Y+H G IHRD+K NI ID + +K+ DFG++ + + D + S+N
Sbjct: 123 RQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPG 182
Query: 176 ------TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLM 229
+ +GT ++A EV+ Y+ K D++S GI E+ + PFS +L
Sbjct: 183 SSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILK 239
Query: 230 TLQNA----PPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLM 272
L++ PP D D + K K+++ + DP KRP A L+
Sbjct: 240 KLRSVSIEFPPDFD---DNKM-KVEKKIIRLLIDHDPNKRPGARTLL 282
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 95/218 (43%), Gaps = 25/218 (11%)
Query: 16 YRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRRE-----VQTMRVTN 70
+ + E +G G V R + E VAIK +C +L RE +Q M+ N
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIK-----QCRQELSPKNRERWCLEIQIMKKLN 70
Query: 71 HPNVLRAH------CSFTTGHCLWVVMPYMAGGSCL-HIMKSAYPEGFEEPVIATLLRET 123
HPNV+ A + M Y GG ++ + G +E I TLL +
Sbjct: 71 HPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDI 130
Query: 124 LKALVYLHFHGHIHRDVKAGNILIDSNGAI---KLADFGVSACMFDAGDRQRSRNTFVGT 180
AL YLH + IHRD+K NI++ K+ D G A D G+ FVGT
Sbjct: 131 SSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGY-AKELDQGELC---TEFVGT 186
Query: 181 PCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
++APE+++Q Y D WSFG A E G PF
Sbjct: 187 LQYLAPELLEQ-KKYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 99/222 (44%), Gaps = 11/222 (4%)
Query: 62 EVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLR 121
E Q + N V+ ++ T L +V+ M GG + GF E
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAA 293
Query: 122 ETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTP 181
E L LH ++RD+K NIL+D +G I+++D G+ A G + R VGT
Sbjct: 294 EICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGL-AVHVPEGQTIKGR---VGTV 349
Query: 182 CWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYE 241
+MAPEV++ Y F D W+ G E+ G +PF + K+ ++ + E
Sbjct: 350 GYMAPEVVKN-ERYTFSPDWWALGCLLYEMIAGQSPFQQR-KKKIKREEVERLVKEVPEE 407
Query: 242 RDKRFSKSFKELVTACLVKDPKKR-----PTAEKLMKHHFFK 278
+RFS + L + L KDP +R +A ++ +H FK
Sbjct: 408 YSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFK 449
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 95/218 (43%), Gaps = 25/218 (11%)
Query: 16 YRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRRE-----VQTMRVTN 70
+ + E +G G V R + E VAIK +C +L RE +Q M+ N
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIK-----QCRQELSPKNRERWCLEIQIMKKLN 71
Query: 71 HPNVLRAH------CSFTTGHCLWVVMPYMAGGSCL-HIMKSAYPEGFEEPVIATLLRET 123
HPNV+ A + M Y GG ++ + G +E I TLL +
Sbjct: 72 HPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDI 131
Query: 124 LKALVYLHFHGHIHRDVKAGNILIDSNGAI---KLADFGVSACMFDAGDRQRSRNTFVGT 180
AL YLH + IHRD+K NI++ K+ D G A D G+ FVGT
Sbjct: 132 SSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGY-AKELDQGELC---TEFVGT 187
Query: 181 PCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
++APE+++Q Y D WSFG A E G PF
Sbjct: 188 LQYLAPELLEQ-KKYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 124/269 (46%), Gaps = 20/269 (7%)
Query: 9 FPVDAKDYRLYEEVGEGVSATV----YRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQ 64
+ +D KD +E+G G V +R VAIK++ ++ + D E +
Sbjct: 4 WEIDPKDLTFLKELGTGQFGVVKYGKWRG-----QYDVAIKMI--KEGSMSEDEFIEEAK 56
Query: 65 TMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETL 124
M +H +++ + T ++++ YMA G L+ ++ F+ + + ++
Sbjct: 57 VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM-RHRFQTQQLLEMCKDVC 115
Query: 125 KALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWM 184
+A+ YL +HRD+ A N L++ G +K++DFG+S + D D S W
Sbjct: 116 EAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD--DEYTSSRGSKFPVRWS 173
Query: 185 APEVMQQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERD 243
PEV+ + K+DIW+FG+ E+ + G P+ ++ + T ++ GL R
Sbjct: 174 PPEVL-MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE----TAEHIAQGLRLYRP 228
Query: 244 KRFSKSFKELVTACLVKDPKKRPTAEKLM 272
S+ ++ +C + +RPT + L+
Sbjct: 229 HLASEKVYTIMYSCWHEKADERPTFKILL 257
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 102/215 (47%), Gaps = 20/215 (9%)
Query: 6 EKRFPVDAKDYRLYEEVGEGVSATVYRALCIP----LNEIVAIKVLDLEKCNNDLDGIRR 61
EKRF +D +GEG V P E VA+K L E N + +++
Sbjct: 19 EKRFLKRIRD------LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKK 72
Query: 62 EVQTMRVTNHPNVLRAH--CSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATL 119
E++ +R H N+++ C+ G+ + ++M ++ GS +K P+ + +
Sbjct: 73 EIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGS----LKEYLPKNKNKINLKQQ 128
Query: 120 LR---ETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNT 176
L+ + K + YL ++HRD+ A N+L++S +K+ DFG++ + + ++
Sbjct: 129 LKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDD 188
Query: 177 FVGTPCWMAPEVMQQLHGYDFKADIWSFGITALEL 211
W APE + Q Y +D+WSFG+T EL
Sbjct: 189 RDSPVFWYAPECLMQSKFY-IASDVWSFGVTLHEL 222
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 125/270 (46%), Gaps = 22/270 (8%)
Query: 9 FPVDAKDYRLYEEVGEGVSATV----YRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQ 64
+ +D KD +E+G G V +R VAIK++ ++ + D E +
Sbjct: 19 WEIDPKDLTFLKELGTGQFGVVKYGKWRG-----QYDVAIKMI--KEGSMSEDEFIEEAK 71
Query: 65 TMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETL 124
M +H +++ + T ++++ YMA G L+ ++ F+ + + ++
Sbjct: 72 VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM-RHRFQTQQLLEMCKDVC 130
Query: 125 KALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPC-W 183
+A+ YL +HRD+ A N L++ G +K++DFG+S + D + F P W
Sbjct: 131 EAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF---PVRW 187
Query: 184 MAPEVMQQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYER 242
PEV+ + K+DIW+FG+ E+ + G P+ ++ + T ++ GL R
Sbjct: 188 SPPEVL-MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE----TAEHIAQGLRLYR 242
Query: 243 DKRFSKSFKELVTACLVKDPKKRPTAEKLM 272
S+ ++ +C + +RPT + L+
Sbjct: 243 PHLASEKVYTIMYSCWHEKADERPTFKILL 272
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 125/270 (46%), Gaps = 22/270 (8%)
Query: 9 FPVDAKDYRLYEEVGEGVSATV----YRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQ 64
+ +D KD +E+G G V +R VAIK++ ++ + D E +
Sbjct: 3 WEIDPKDLTFLKELGTGQFGVVKYGKWRG-----QYDVAIKMI--KEGSMSEDEFIEEAK 55
Query: 65 TMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETL 124
M +H +++ + T ++++ YMA G L+ ++ F+ + + ++
Sbjct: 56 VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM-RHRFQTQQLLEMCKDVC 114
Query: 125 KALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPC-W 183
+A+ YL +HRD+ A N L++ G +K++DFG+S + D + F P W
Sbjct: 115 EAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF---PVRW 171
Query: 184 MAPEVMQQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYER 242
PEV+ + K+DIW+FG+ E+ + G P+ ++ + T ++ GL R
Sbjct: 172 SPPEVL-MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE----TAEHIAQGLRLYR 226
Query: 243 DKRFSKSFKELVTACLVKDPKKRPTAEKLM 272
S+ ++ +C + +RPT + L+
Sbjct: 227 PHLASEKVYTIMYSCWHEKADERPTFKILL 256
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 99/222 (44%), Gaps = 11/222 (4%)
Query: 62 EVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLR 121
E Q + N V+ ++ T L +V+ M GG + GF E
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAA 293
Query: 122 ETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTP 181
E L LH ++RD+K NIL+D +G I+++D G+ A G + R VGT
Sbjct: 294 EICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGL-AVHVPEGQTIKGR---VGTV 349
Query: 182 CWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYE 241
+MAPEV++ Y F D W+ G E+ G +PF + K+ ++ + E
Sbjct: 350 GYMAPEVVKN-ERYTFSPDWWALGCLLYEMIAGQSPFQQR-KKKIKREEVERLVKEVPEE 407
Query: 242 RDKRFSKSFKELVTACLVKDPKKR-----PTAEKLMKHHFFK 278
+RFS + L + L KDP +R +A ++ +H FK
Sbjct: 408 YSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFK 449
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 112/260 (43%), Gaps = 18/260 (6%)
Query: 22 VGEGVSATVYRALCI--PLNEI-VAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAH 78
+G+G VY I N I AIK L ++ RE MR NHPNVL
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALI 88
Query: 79 CSFTTGHCL-WVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLR---ETLKALVYLHFHG 134
L V++PYM G L ++S P+ P + L+ + + + YL
Sbjct: 89 GIMLPPEGLPHVLLPYMCHGDLLQFIRS--PQ--RNPTVKDLISFGLQVARGMEYLAEQK 144
Query: 135 HIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPC-WMAPEVMQQLH 193
+HRD+ A N ++D + +K+ADFG++ + D ++ P W A E +Q +
Sbjct: 145 FVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQT-Y 203
Query: 194 GYDFKADIWSFGITALE-LAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKE 252
+ K+D+WSFG+ E L G P+ P + Q G + + S +
Sbjct: 204 RFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQ----GRRLPQPEYCPDSLYQ 259
Query: 253 LVTACLVKDPKKRPTAEKLM 272
++ C DP RPT L+
Sbjct: 260 VMQQCWEADPAVRPTFRVLV 279
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 125/270 (46%), Gaps = 22/270 (8%)
Query: 9 FPVDAKDYRLYEEVGEGVSATV----YRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQ 64
+ +D KD +E+G G V +R VAIK++ ++ + D E +
Sbjct: 10 WEIDPKDLTFLKELGTGQFGVVKYGKWRG-----QYDVAIKMI--KEGSMSEDEFIEEAK 62
Query: 65 TMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETL 124
M +H +++ + T ++++ YMA G L+ ++ F+ + + ++
Sbjct: 63 VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM-RHRFQTQQLLEMCKDVC 121
Query: 125 KALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPC-W 183
+A+ YL +HRD+ A N L++ G +K++DFG+S + D + F P W
Sbjct: 122 EAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF---PVRW 178
Query: 184 MAPEVMQQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYER 242
PEV+ + K+DIW+FG+ E+ + G P+ ++ + T ++ GL R
Sbjct: 179 SPPEVL-MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE----TAEHIAQGLRLYR 233
Query: 243 DKRFSKSFKELVTACLVKDPKKRPTAEKLM 272
S+ ++ +C + +RPT + L+
Sbjct: 234 PHLASEKVYTIMYSCWHEKADERPTFKILL 263
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 102/215 (47%), Gaps = 20/215 (9%)
Query: 6 EKRFPVDAKDYRLYEEVGEGVSATVYRALCIP----LNEIVAIKVLDLEKCNNDLDGIRR 61
EKRF +D +GEG V P E VA+K L E N + +++
Sbjct: 7 EKRFLKRIRD------LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKK 60
Query: 62 EVQTMRVTNHPNVLRAH--CSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATL 119
E++ +R H N+++ C+ G+ + ++M ++ GS +K P+ + +
Sbjct: 61 EIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGS----LKEYLPKNKNKINLKQQ 116
Query: 120 LR---ETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNT 176
L+ + K + YL ++HRD+ A N+L++S +K+ DFG++ + + ++
Sbjct: 117 LKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDD 176
Query: 177 FVGTPCWMAPEVMQQLHGYDFKADIWSFGITALEL 211
W APE + Q Y +D+WSFG+T EL
Sbjct: 177 RDSPVFWYAPECLMQSKFY-IASDVWSFGVTLHEL 210
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 125/270 (46%), Gaps = 22/270 (8%)
Query: 9 FPVDAKDYRLYEEVGEGVSATV----YRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQ 64
+ +D KD +E+G G V +R VAIK++ ++ + D E +
Sbjct: 4 WEIDPKDLTFLKELGTGQFGVVKYGKWRG-----QYDVAIKMI--KEGSMSEDEFIEEAK 56
Query: 65 TMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETL 124
M +H +++ + T ++++ YMA G L+ ++ F+ + + ++
Sbjct: 57 VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM-RHRFQTQQLLEMCKDVC 115
Query: 125 KALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPC-W 183
+A+ YL +HRD+ A N L++ G +K++DFG+S + D + F P W
Sbjct: 116 EAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF---PVRW 172
Query: 184 MAPEVMQQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYER 242
PEV+ + K+DIW+FG+ E+ + G P+ ++ + T ++ GL R
Sbjct: 173 SPPEVL-MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE----TAEHIAQGLRLYR 227
Query: 243 DKRFSKSFKELVTACLVKDPKKRPTAEKLM 272
S+ ++ +C + +RPT + L+
Sbjct: 228 PHLASEKVYTIMYSCWHEKADERPTFKILL 257
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 127/279 (45%), Gaps = 29/279 (10%)
Query: 18 LYEEVGEGVSATVYRALCIPLNE-------IVAIKVLDLEKCNNDLDGIRREVQTMR-VT 69
L + +GEG V A I L++ VA+K+L + DL + E++ M+ +
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 91
Query: 70 NHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPV-------------- 115
H N++ + T L+V++ Y + G+ +++ P G E
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKD 151
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
+ + + + + YL IHRD+ A N+L+ + +K+ADFG++ + +++ N
Sbjct: 152 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTN 211
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNA 234
+ WMAPE + Y ++D+WSFG+ E+ G +P+ P++ L L+
Sbjct: 212 GRLPVK-WMAPEALFD-RIYTHQSDVWSFGVLLWEIFTLGGSPYPGV-PVEELFKLLKE- 267
Query: 235 PPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMK 273
G ++ + ++ C P +RPT ++L++
Sbjct: 268 --GHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 304
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 127/313 (40%), Gaps = 64/313 (20%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR--REVQTMRVTNH 71
K Y+ + +G G V A L VA+K L N R RE+ ++ NH
Sbjct: 22 KRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLS-RPFQNQTHAKRAYRELVLLKCVNH 80
Query: 72 PNVLRAHCSFTTGHCL------WVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
N++ FT L ++VM M C I + ++ LL + L
Sbjct: 81 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHME-----LDHERMSYLLYQMLC 135
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN----TFVGTP 181
+ +LH G IHRD+K NI++ S+ +K+ DFG++ R S N +V T
Sbjct: 136 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA--------RTASTNFMMTPYVVTR 187
Query: 182 CWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFS------------------KYPP 223
+ APEV+ + GY DIWS G EL G F
Sbjct: 188 YYRAPEVILGM-GYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEF 246
Query: 224 MKVLLMTLQN------APPGLDY-------------ERDKRFSKSFKELVTACLVKDPKK 264
M L T++N A PG+ + ERDK + ++L++ LV DP K
Sbjct: 247 MAALQPTVRNYVENRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDK 306
Query: 265 RPTAEKLMKHHFF 277
R + ++ ++H +
Sbjct: 307 RISVDEALRHPYI 319
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 23/205 (11%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGI---RREVQTMRVTNH 71
+Y + E +G G V A + VAIK K N D + +R ++ +++ H
Sbjct: 55 EYEIIETIGNGAYGVVSSARRRLTGQQVAIK-----KIPNAFDVVTNAKRTLRELKILKH 109
Query: 72 ---------PNVLRAHCSFTTGHCLWVVMPYMAGGSCLH-IMKSAYPEGFEEPVIATLLR 121
++LR + ++VV+ M S LH I+ S+ P E + L
Sbjct: 110 FKHDNIIAIKDILRPTVPYGEFKSVYVVLDLME--SDLHQIIHSSQPLTLEH--VRYFLY 165
Query: 122 ETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDA-GDRQRSRNTFVGT 180
+ L+ L Y+H IHRD+K N+L++ N +K+ DFG++ + + + Q +V T
Sbjct: 166 QLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVAT 225
Query: 181 PCWMAPEVMQQLHGYDFKADIWSFG 205
+ APE+M LH Y D+WS G
Sbjct: 226 RWYRAPELMLSLHEYTQAIDLWSVG 250
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 125/275 (45%), Gaps = 29/275 (10%)
Query: 22 VGEGVSATVYRALCIPLNE-------IVAIKVLDLEKCNNDLDGIRREVQTMR-VTNHPN 73
+GEG V A I L++ VA+K+L + DL + E++ M+ + H N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 74 VLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPV--------------IATL 119
++ + T L+V++ Y + G+ +++ P G E + +
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 120 LRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVG 179
+ + + YL IHRD+ A N+L+ + +K+ADFG++ + +++ N +
Sbjct: 145 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP 204
Query: 180 TPCWMAPEVMQQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGL 238
WMAPE + Y ++D+WSFG+ E+ G +P+ P++ L L+ G
Sbjct: 205 VK-WMAPEALFD-RIYTHQSDVWSFGVLLWEIFTLGGSPYPGV-PVEELFKLLKE---GH 258
Query: 239 DYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMK 273
++ + ++ C P +RPT ++L++
Sbjct: 259 RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 293
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 126/270 (46%), Gaps = 26/270 (9%)
Query: 11 VDAKDYRLYEEVGEGVSATV----YRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTM 66
+D KD +E+G G V +R VAIK++ ++ + D E + M
Sbjct: 1 IDPKDLTFLKELGTGQFGVVKYGKWRG-----QYDVAIKMI--KEGSMSEDEFIEEAKVM 53
Query: 67 RVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKA 126
+H +++ + T ++++ YMA G L+ ++ F+ + + ++ +A
Sbjct: 54 MNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM-RHRFQTQQLLEMCKDVCEA 112
Query: 127 LVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPC---W 183
+ YL +HRD+ A N L++ G +K++DFG+S + D D S VG+ W
Sbjct: 113 MEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD--DEYTSS---VGSKFPVRW 167
Query: 184 MAPEVMQQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYER 242
PEV+ + K+DIW+FG+ E+ + G P+ ++ + T ++ GL R
Sbjct: 168 SPPEVL-MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE----TAEHIAQGLRLYR 222
Query: 243 DKRFSKSFKELVTACLVKDPKKRPTAEKLM 272
S+ ++ +C + +RPT + L+
Sbjct: 223 PHLASEKVYTIMYSCWHEKADERPTFKILL 252
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 125/275 (45%), Gaps = 29/275 (10%)
Query: 22 VGEGVSATVYRALCIPLNE-------IVAIKVLDLEKCNNDLDGIRREVQTMR-VTNHPN 73
+GEG V A I L++ VA+K+L + DL + E++ M+ + H N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 74 VLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPV--------------IATL 119
++ + T L+V++ Y + G+ +++ P G E + +
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 120 LRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVG 179
+ + + YL IHRD+ A N+L+ + +K+ADFG++ + +++ N +
Sbjct: 148 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP 207
Query: 180 TPCWMAPEVMQQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGL 238
WMAPE + Y ++D+WSFG+ E+ G +P+ P++ L L+ G
Sbjct: 208 VK-WMAPEALFD-RIYTHQSDVWSFGVLLWEIFTLGGSPYPGV-PVEELFKLLKE---GH 261
Query: 239 DYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMK 273
++ + ++ C P +RPT ++L++
Sbjct: 262 RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 296
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 121/298 (40%), Gaps = 35/298 (11%)
Query: 16 YRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLD-GIRREVQTMR---VTNH 71
Y E+G G TVY+A VA+K + + L REV +R H
Sbjct: 6 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEH 65
Query: 72 PNVLRAH--CSFT-TGHCLWVVMPYMAGGSCLHI-MKSAYPEGFEEPVIATLLRETLKAL 127
PNV+R C+ + T + V + + L + A P G I L+R+ L+ L
Sbjct: 66 PNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGL 125
Query: 128 VYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPE 187
+LH + +HRD+K NIL+ S G +KLADFG++ Q + V T + APE
Sbjct: 126 DFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIY----SYQMALAPVVVTLWYRAPE 181
Query: 188 VMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVL--LMTLQNAPPGLDYERDKR 245
V+ Q Y D+WS G E+ F L + L PP D+ RD
Sbjct: 182 VLLQ-STYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVS 240
Query: 246 FSK--------------------SFKELVTACLVKDPKKRPTAEKLMKHHFFKHARSN 283
+ S +L+ L +P KR +A + ++H + N
Sbjct: 241 LPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEGN 298
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 121/294 (41%), Gaps = 46/294 (15%)
Query: 22 VGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR--REVQTMRVTNHPNVLRAHC 79
VG G +V A+ E VAIK L +++ R RE+ ++ H NV+
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLS-RPFQSEIFAKRAYRELLLLKHMQHENVIGLLD 90
Query: 80 SFTTGHCL------WVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFH 133
FT L ++VMP+M ++ F E I L+ + LK L Y+H
Sbjct: 91 VFTPASSLRNFYDFYLVMPFMQTD-----LQKIMGLKFSEEKIQYLVYQMLKGLKYIHSA 145
Query: 134 GHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLH 193
G +HRD+K GN+ ++ + +K+ DFG+ A +V T + APEV+
Sbjct: 146 GVVHRDLKPGNLAVNEDCELKILDFGL------ARHADAEMTGYVVTRWYRAPEVILSWM 199
Query: 194 GYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NAPPGLDYERD--------- 243
Y+ DIWS G E+ G F + L L+ PG ++ +
Sbjct: 200 HYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSY 259
Query: 244 ---------KRFSKSF-------KELVTACLVKDPKKRPTAEKLMKHHFFKHAR 281
K F++ F +L+ L D KR TA + + H FF+ R
Sbjct: 260 IQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFR 313
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 125/275 (45%), Gaps = 29/275 (10%)
Query: 22 VGEGVSATVYRALCIPLNE-------IVAIKVLDLEKCNNDLDGIRREVQTMR-VTNHPN 73
+GEG V A I L++ VA+K+L + DL + E++ M+ + H N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 74 VLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPV--------------IATL 119
++ + T L+V++ Y + G+ +++ P G E + +
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 120 LRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVG 179
+ + + YL IHRD+ A N+L+ + +K+ADFG++ + +++ N +
Sbjct: 197 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP 256
Query: 180 TPCWMAPEVMQQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGL 238
WMAPE + Y ++D+WSFG+ E+ G +P+ P++ L L+ G
Sbjct: 257 VK-WMAPEALFD-RIYTHQSDVWSFGVLLWEIFTLGGSPYPGV-PVEELFKLLKE---GH 310
Query: 239 DYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMK 273
++ + ++ C P +RPT ++L++
Sbjct: 311 RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 345
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 125/275 (45%), Gaps = 29/275 (10%)
Query: 22 VGEGVSATVYRALCIPLNE-------IVAIKVLDLEKCNNDLDGIRREVQTMR-VTNHPN 73
+GEG V A I L++ VA+K+L + DL + E++ M+ + H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 74 VLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPV--------------IATL 119
++ + T L+V++ Y + G+ +++ P G E + +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 120 LRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVG 179
+ + + YL IHRD+ A N+L+ + +K+ADFG++ + +++ N +
Sbjct: 156 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP 215
Query: 180 TPCWMAPEVMQQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGL 238
WMAPE + Y ++D+WSFG+ E+ G +P+ P++ L L+ G
Sbjct: 216 VK-WMAPEALFD-RIYTHQSDVWSFGVLLWEIFTLGGSPYPGV-PVEELFKLLKE---GH 269
Query: 239 DYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMK 273
++ + ++ C P +RPT ++L++
Sbjct: 270 RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 304
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 23/205 (11%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGI---RREVQTMRVTNH 71
+Y + E +G G V A + VAIK K N D + +R ++ +++ H
Sbjct: 56 EYEIIETIGNGAYGVVSSARRRLTGQQVAIK-----KIPNAFDVVTNAKRTLRELKILKH 110
Query: 72 ---------PNVLRAHCSFTTGHCLWVVMPYMAGGSCLH-IMKSAYPEGFEEPVIATLLR 121
++LR + ++VV+ M S LH I+ S+ P E + L
Sbjct: 111 FKHDNIIAIKDILRPTVPYGEFKSVYVVLDLME--SDLHQIIHSSQPLTLEH--VRYFLY 166
Query: 122 ETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDA-GDRQRSRNTFVGT 180
+ L+ L Y+H IHRD+K N+L++ N +K+ DFG++ + + + Q +V T
Sbjct: 167 QLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVAT 226
Query: 181 PCWMAPEVMQQLHGYDFKADIWSFG 205
+ APE+M LH Y D+WS G
Sbjct: 227 RWYRAPELMLSLHEYTQAIDLWSVG 251
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 106/242 (43%), Gaps = 27/242 (11%)
Query: 42 VAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLH 101
VAIK L + E M +HPNV+ T G + +V+ +M G+ L
Sbjct: 74 VAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGA-LD 132
Query: 102 IMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVS 161
+ F + +LR + YL G++HRD+ A NIL++SN K++DFG+S
Sbjct: 133 AFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLS 192
Query: 162 ACMFDAGDRQRSRNTFVG-TPC-WMAPEVMQQLHGYDFKADIWSFGITALE-LAHGHAPF 218
+ D D + T G P W APE + Q + +D+WS+GI E +++G P+
Sbjct: 193 RVIED--DPEAVYTTTGGKIPVRWTAPEAI-QYRKFTSASDVWSYGIVMWEVMSYGERPY 249
Query: 219 SKYPPMKVL--------LMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEK 270
V+ L + P GL +L+ C K+ +RP E+
Sbjct: 250 WDMSNQDVIKAIEEGYRLPAPMDCPAGL------------HQLMLDCWQKERAERPKFEQ 297
Query: 271 LM 272
++
Sbjct: 298 IV 299
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 125/275 (45%), Gaps = 29/275 (10%)
Query: 22 VGEGVSATVYRALCIPLNE-------IVAIKVLDLEKCNNDLDGIRREVQTMR-VTNHPN 73
+GEG V A I L++ VA+K+L + DL + E++ M+ + H N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 74 VLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPV--------------IATL 119
++ + T L+V++ Y + G+ +++ P G E + +
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 120 LRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVG 179
+ + + YL IHRD+ A N+L+ + +K+ADFG++ + +++ N +
Sbjct: 149 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP 208
Query: 180 TPCWMAPEVMQQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGL 238
WMAPE + Y ++D+WSFG+ E+ G +P+ P++ L L+ G
Sbjct: 209 VK-WMAPEALFD-RIYTHQSDVWSFGVLLWEIFTLGGSPYPGV-PVEELFKLLKE---GH 262
Query: 239 DYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMK 273
++ + ++ C P +RPT ++L++
Sbjct: 263 RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 297
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 125/275 (45%), Gaps = 29/275 (10%)
Query: 22 VGEGVSATVYRALCIPLNE-------IVAIKVLDLEKCNNDLDGIRREVQTMR-VTNHPN 73
+GEG V A I L++ VA+K+L + DL + E++ M+ + H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 74 VLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPV--------------IATL 119
++ + T L+V++ Y + G+ +++ P G E + +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 120 LRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVG 179
+ + + YL IHRD+ A N+L+ + +K+ADFG++ + +++ N +
Sbjct: 156 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP 215
Query: 180 TPCWMAPEVMQQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGL 238
WMAPE + Y ++D+WSFG+ E+ G +P+ P++ L L+ G
Sbjct: 216 VK-WMAPEALFD-RIYTHQSDVWSFGVLLWEIFTLGGSPYPGV-PVEELFKLLKE---GH 269
Query: 239 DYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMK 273
++ + ++ C P +RPT ++L++
Sbjct: 270 RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 304
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 121/294 (41%), Gaps = 46/294 (15%)
Query: 22 VGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR--REVQTMRVTNHPNVLRAHC 79
VG G +V A+ E VAIK L +++ R RE+ ++ H NV+
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLS-RPFQSEIFAKRAYRELLLLKHMQHENVIGLLD 108
Query: 80 SFTTGHCL------WVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFH 133
FT L ++VMP+M ++ F E I L+ + LK L Y+H
Sbjct: 109 VFTPASSLRNFYDFYLVMPFMQTD-----LQKIMGMEFSEEKIQYLVYQMLKGLKYIHSA 163
Query: 134 GHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLH 193
G +HRD+K GN+ ++ + +K+ DFG+ A +V T + APEV+
Sbjct: 164 GVVHRDLKPGNLAVNEDCELKILDFGL------ARHADAEMTGYVVTRWYRAPEVILSWM 217
Query: 194 GYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NAPPGLDYERD--------- 243
Y+ DIWS G E+ G F + L L+ PG ++ +
Sbjct: 218 HYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSY 277
Query: 244 ---------KRFSKSF-------KELVTACLVKDPKKRPTAEKLMKHHFFKHAR 281
K F++ F +L+ L D KR TA + + H FF+ R
Sbjct: 278 IQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFR 331
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 112/226 (49%), Gaps = 17/226 (7%)
Query: 55 DLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL-HIMKSAYPEGFEE 113
D + ++ E+ M +H N+++ + +F + + + +VM Y+ GG I+ +Y E
Sbjct: 129 DKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESY--NLTE 186
Query: 114 PVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGA--IKLADFGVSACMFDAGDRQ 171
+++ + + ++H +H D+K NIL + A IK+ DFG++ R+
Sbjct: 187 LDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLAR---RYKPRE 243
Query: 172 RSRNTFVGTPCWMAPEVMQQLHGYDFKA---DIWSFGITALELAHGHAPFSKYPPMKVLL 228
+ + F GTP ++APEV+ YDF + D+WS G+ A L G +PF + L
Sbjct: 244 KLKVNF-GTPEFLAPEVV----NYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLN 298
Query: 229 MTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKH 274
L L+ E + S+ KE ++ L+K+ R +A + +KH
Sbjct: 299 NILA-CRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKH 343
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 121/298 (40%), Gaps = 35/298 (11%)
Query: 16 YRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLD-GIRREVQTMR---VTNH 71
Y E+G G TVY+A VA+K + + L REV +R H
Sbjct: 6 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEH 65
Query: 72 PNVLRAH--CSFT-TGHCLWVVMPYMAGGSCLHI-MKSAYPEGFEEPVIATLLRETLKAL 127
PNV+R C+ + T + V + + L + A P G I L+R+ L+ L
Sbjct: 66 PNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGL 125
Query: 128 VYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPE 187
+LH + +HRD+K NIL+ S G +KLADFG++ Q + V T + APE
Sbjct: 126 DFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIY----SYQMALFPVVVTLWYRAPE 181
Query: 188 VMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVL--LMTLQNAPPGLDYERDKR 245
V+ Q Y D+WS G E+ F L + L PP D+ RD
Sbjct: 182 VLLQ-STYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVS 240
Query: 246 FSK--------------------SFKELVTACLVKDPKKRPTAEKLMKHHFFKHARSN 283
+ S +L+ L +P KR +A + ++H + N
Sbjct: 241 LPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEGN 298
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 89/183 (48%), Gaps = 13/183 (7%)
Query: 42 VAIKVLDL---EKCNNDLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGS 98
VAIK L + EK D G E M +HPN++ T + +V YM GS
Sbjct: 53 VAIKTLKVGYTEKQRRDFLG---EASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGS 109
Query: 99 CLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADF 158
+K + F + +LR + YL G++HRD+ A NILI+SN K++DF
Sbjct: 110 LDTFLKKNDGQ-FTVIQLVGMLRGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDF 168
Query: 159 GVSACMFDAGDRQRSRNTFVG-TPC-WMAPEVMQQLHGYDFKADIWSFGITALE-LAHGH 215
G+S + D D + + T G P W APE + + +D+WS+GI E +++G
Sbjct: 169 GLSRVLED--DPEAAYTTRGGKIPIRWTAPEAI-AFRKFTSASDVWSYGIVMWEVVSYGE 225
Query: 216 APF 218
P+
Sbjct: 226 RPY 228
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 125/275 (45%), Gaps = 29/275 (10%)
Query: 22 VGEGVSATVYRALCIPLNE-------IVAIKVLDLEKCNNDLDGIRREVQTMR-VTNHPN 73
+GEG V A I L++ VA+K+L + DL + E++ M+ + H N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 74 VLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPV--------------IATL 119
++ + T L+V++ Y + G+ +++ P G E + +
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 120 LRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVG 179
+ + + YL IHRD+ A N+L+ + +K+ADFG++ + +++ N +
Sbjct: 141 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP 200
Query: 180 TPCWMAPEVMQQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGL 238
WMAPE + Y ++D+WSFG+ E+ G +P+ P++ L L+ G
Sbjct: 201 VK-WMAPEALFD-RIYTHQSDVWSFGVLLWEIFTLGGSPYPGV-PVEELFKLLKE---GH 254
Query: 239 DYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMK 273
++ + ++ C P +RPT ++L++
Sbjct: 255 RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 289
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 123/293 (41%), Gaps = 31/293 (10%)
Query: 3 LVVEKRFPVDAKDYRLYEEV-GEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRR 61
L ++K +D DY++ +V G G++ V + E A+K L D RR
Sbjct: 52 LQIKKNAIID--DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKXL------QDCPKARR 103
Query: 62 EVQT-MRVTNHPNVLR---AHCSFTTGH-CLWVVMPYMAGGSCLHIMKSAYPEGFEEPVI 116
EV+ R + P+++R + + G CL +V + GG ++ + F E
Sbjct: 104 EVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREA 163
Query: 117 ATLLRETLKALVYLHFHGHIHRDVKAGNILIDS---NGAIKLADFGVSACMFDAGDRQRS 173
+ + + +A+ YLH HRDVK N+L S N +KL DFG + S
Sbjct: 164 SEIXKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSHNS 219
Query: 174 RNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF------SKYPPMKVL 227
T TP ++APEV+ YD D WS G+ L G+ PF + P K
Sbjct: 220 LTTPCYTPYYVAPEVLGP-EKYDKSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTR 278
Query: 228 LMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFKHA 280
+ Q P ++ S+ K L+ L +P +R T + H + +
Sbjct: 279 IRXGQYEFPNPEWS---EVSEEVKXLIRNLLKTEPTQRXTITEFXNHPWIXQS 328
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 125/275 (45%), Gaps = 29/275 (10%)
Query: 22 VGEGVSATVYRALCIPLNE-------IVAIKVLDLEKCNNDLDGIRREVQTMR-VTNHPN 73
+GEG V A I L++ VA+K+L + DL + E++ M+ + H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 74 VLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPV--------------IATL 119
++ + T L+V++ Y + G+ +++ P G E + +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 120 LRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVG 179
+ + + YL IHRD+ A N+L+ + +K+ADFG++ + +++ N +
Sbjct: 156 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP 215
Query: 180 TPCWMAPEVMQQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGL 238
WMAPE + Y ++D+WSFG+ E+ G +P+ P++ L L+ G
Sbjct: 216 VK-WMAPEALFD-RIYTHQSDVWSFGVLLWEIFTLGGSPYPGV-PVEELFKLLKE---GH 269
Query: 239 DYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMK 273
++ + ++ C P +RPT ++L++
Sbjct: 270 RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 304
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 124/282 (43%), Gaps = 27/282 (9%)
Query: 8 RFPVDAKDYRLYE-EVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGI------R 60
R P A + YE ++G+G V++ + +VAIK L L + + I +
Sbjct: 12 RLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQ 71
Query: 61 REVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLH-IMKSAYPEGFEEPVIATL 119
REV M NHPN+++ + + VM ++ G H ++ A+P + V L
Sbjct: 72 REVFIMSNLNHPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLDKAHP--IKWSVKLRL 127
Query: 120 LRETLKALVYLHFHGH--IHRDVKAGNILI---DSNGAI--KLADFGVSACMFDAGDRQR 172
+ + + Y+ +HRD+++ NI + D N + K+ADFG+S
Sbjct: 128 MLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ------QSVH 181
Query: 173 SRNTFVGTPCWMAPEVM-QQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTL 231
S + +G WMAPE + + Y KAD +SF + + G PF +Y K+ + +
Sbjct: 182 SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINM 241
Query: 232 QNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMK 273
GL + + ++ C DPKKRP ++K
Sbjct: 242 IRE-EGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVK 282
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 125/311 (40%), Gaps = 60/311 (19%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR--REVQTMRVTNH 71
K Y+ + +G G V A L VA+K L N R RE+ ++ NH
Sbjct: 24 KRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLS-RPFQNQTHAKRAYRELVLLKCVNH 82
Query: 72 PNVLRAHCSFTTGHCL------WVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
N++ FT L ++VM M C I + ++ LL + L
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHME-----LDHERMSYLLYQMLC 137
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGV--SACMFDAGDRQRSRNTFVGTPCW 183
+ +LH G IHRD+K NI++ S+ +K+ DFG+ +AC +V T +
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAC------TNFMMTPYVVTRYY 191
Query: 184 MAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKY--------------PPMKVLLM 229
APEV+ + GY DIWS G EL G F P +
Sbjct: 192 RAPEVILGM-GYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMA 250
Query: 230 TLQ--------NAP--PGLDY-------------ERDKRFSKSFKELVTACLVKDPKKRP 266
LQ N P PG+ + ERDK + ++L++ LV DP KR
Sbjct: 251 ALQPTVRNYVENRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRI 310
Query: 267 TAEKLMKHHFF 277
+ ++ ++H +
Sbjct: 311 SVDEALRHPYI 321
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 123/282 (43%), Gaps = 27/282 (9%)
Query: 8 RFPVDAKDYRLYE-EVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGI------R 60
R P A + YE ++G+G V++ + +VAIK L L + + I +
Sbjct: 12 RLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQ 71
Query: 61 REVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLH-IMKSAYPEGFEEPVIATL 119
REV M NHPN+++ + + VM ++ G H ++ A+P + V L
Sbjct: 72 REVFIMSNLNHPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLDKAHP--IKWSVKLRL 127
Query: 120 LRETLKALVYLHFHGH--IHRDVKAGNILI---DSNGAI--KLADFGVSACMFDAGDRQR 172
+ + + Y+ +HRD+++ NI + D N + K+ADFG S
Sbjct: 128 MLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ------QSVH 181
Query: 173 SRNTFVGTPCWMAPEVM-QQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTL 231
S + +G WMAPE + + Y KAD +SF + + G PF +Y K+ + +
Sbjct: 182 SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINM 241
Query: 232 QNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMK 273
GL + + ++ C DPKKRP ++K
Sbjct: 242 IRE-EGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVK 282
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 127/279 (45%), Gaps = 28/279 (10%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEI----VAIKVLDLEKCNNDLDGIRREVQTMRVTN 70
+ R + +G GV TV++ + IP E V IKV++ + + + + +
Sbjct: 32 ELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLD 91
Query: 71 HPNVLRAHCSFTTGHCLWVVMPYMAGGSCL-HIMKSAYPEGFEEPVIATLLRETLKALVY 129
H +++R G L +V Y+ GS L H+ + G + ++ + K + Y
Sbjct: 92 HAHIVRL-LGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQ--LLLNWGVQIAKGMYY 148
Query: 130 LHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVM 189
L HG +HR++ A N+L+ S +++ADFGV A + D+Q + WMA E +
Sbjct: 149 LEEHGMVHRNLAARNVLLKSPSQVQVADFGV-ADLLPPDDKQLLYSEAKTPIKWMALESI 207
Query: 190 QQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSK 248
Y ++D+WS+G+T EL G P++ + L P L E+ +R ++
Sbjct: 208 -HFGKYTHQSDVWSYGVTVWELMTFGAEPYAG--------LRLAEVPDLL--EKGERLAQ 256
Query: 249 ------SFKELVTACLVKDPKKRPTAEKLMKHHFFKHAR 281
++ C + D RPT ++L + F + AR
Sbjct: 257 PQICTIDVYMVMVKCWMIDENIRPTFKEL-ANEFTRMAR 294
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 100/219 (45%), Gaps = 10/219 (4%)
Query: 17 RLYEEVGEGVSATVYRALCIPLN----EIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHP 72
+ +++G+G +V PL E+VA+K L L RE++ ++ H
Sbjct: 16 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHD 74
Query: 73 NVLRAH--CSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYL 130
N+++ C L ++M Y+ GS ++ A+ E + + + K + YL
Sbjct: 75 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-AHAERIDHIKLLQYTSQICKGMEYL 133
Query: 131 HFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
+IHRD+ NIL+++ +K+ DFG++ + + + + W APE +
Sbjct: 134 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 191 QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLM 229
+ + +D+WSFG+ EL + SK PP + + M
Sbjct: 194 E-SKFSVASDVWSFGVVLYEL-FTYIEKSKSPPAEFMRM 230
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 120/289 (41%), Gaps = 42/289 (14%)
Query: 20 EEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAHC 79
+++GEG ATVY+ + +VA+K + LE REV ++ H N++ H
Sbjct: 8 DKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHD 67
Query: 80 SFTTGHCLWVVMPYMAGG------SCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFH 133
T L +V Y+ C +I+ + F L + L+ L Y H
Sbjct: 68 IIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLF--------LFQLLRGLAYCHRQ 119
Query: 134 GHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLH 193
+HRD+K N+LI+ G +KLADFG++ ++ + V T + P+++
Sbjct: 120 KVLHRDLKPQNLLINERGELKLADFGLARA---KSIPTKTYDNEVVTLWYRPPDILLGST 176
Query: 194 GYDFKADIWSFGITALELAHGHAPF-------SKYPPMKVLLMTLQNAPPGL-------- 238
Y + D+W G E+A G F + ++L + PG+
Sbjct: 177 DYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKT 236
Query: 239 -DYERDK---------RFSKSFKELVTACLVKDPKKRPTAEKLMKHHFF 277
+Y + + R +L+T L + + R +AE MKH FF
Sbjct: 237 YNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFF 285
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 127/279 (45%), Gaps = 28/279 (10%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEI----VAIKVLDLEKCNNDLDGIRREVQTMRVTN 70
+ R + +G GV TV++ + IP E V IKV++ + + + + +
Sbjct: 14 ELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLD 73
Query: 71 HPNVLRAHCSFTTGHCLWVVMPYMAGGSCL-HIMKSAYPEGFEEPVIATLLRETLKALVY 129
H +++R G L +V Y+ GS L H+ + G + ++ + K + Y
Sbjct: 74 HAHIVRL-LGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQ--LLLNWGVQIAKGMYY 130
Query: 130 LHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVM 189
L HG +HR++ A N+L+ S +++ADFGV A + D+Q + WMA E +
Sbjct: 131 LEEHGMVHRNLAARNVLLKSPSQVQVADFGV-ADLLPPDDKQLLYSEAKTPIKWMALESI 189
Query: 190 QQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSK 248
Y ++D+WS+G+T EL G P++ + L P L E+ +R ++
Sbjct: 190 -HFGKYTHQSDVWSYGVTVWELMTFGAEPYAG--------LRLAEVPDLL--EKGERLAQ 238
Query: 249 ------SFKELVTACLVKDPKKRPTAEKLMKHHFFKHAR 281
++ C + D RPT ++L + F + AR
Sbjct: 239 PQICTIDVYMVMVKCWMIDENIRPTFKEL-ANEFTRMAR 276
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 122/301 (40%), Gaps = 38/301 (12%)
Query: 16 YRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR----REVQTMR---V 68
Y E+G G TVY+A VA+K + + G+ REV +R
Sbjct: 11 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEA 70
Query: 69 TNHPNVLRAH--CSFT-TGHCLWVVMPYMAGGSCLHI-MKSAYPEGFEEPVIATLLRETL 124
HPNV+R C+ + T + V + + L + A P G I L+R+ L
Sbjct: 71 FEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFL 130
Query: 125 KALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWM 184
+ L +LH + +HRD+K NIL+ S G +KLADFG++ Q + V T +
Sbjct: 131 RGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIY----SYQMALTPVVVTLWYR 186
Query: 185 APEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVL--LMTLQNAPPGLDYER 242
APEV+ Q Y D+WS G E+ F L + L PP D+ R
Sbjct: 187 APEVLLQ-STYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPR 245
Query: 243 DKRFSK--------------------SFKELVTACLVKDPKKRPTAEKLMKHHFFKHARS 282
D + S +L+ L +P KR +A + ++H +
Sbjct: 246 DVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEG 305
Query: 283 N 283
N
Sbjct: 306 N 306
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 93/213 (43%), Gaps = 19/213 (8%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR--REVQTMRVTNH 71
K Y+ + +G G V A L VAIK L N R RE+ M+V NH
Sbjct: 24 KRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKVVNH 82
Query: 72 PNVLRAHCSFTTGHCL------WVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
N++ FT L ++VM M I + ++ LL + L
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME-----LDHERMSYLLYQMLV 137
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
+ +LH G IHRD+K NI++ S+ +K+ DFG++ AG +V T + A
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART---AGT-SFMMTPYVVTRYYRA 193
Query: 186 PEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
PEV+ + GY DIWS G+ E+ G F
Sbjct: 194 PEVILGM-GYKENVDIWSVGVIMGEMIKGGVLF 225
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 122/284 (42%), Gaps = 38/284 (13%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLN-----EIVAIKVLDLEKCNNDLDGIRREVQTMRV 68
K+ L + +GEG V +A L VA+K+L ++L + E ++
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 69 TNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEG--------------FEEP 114
NHP+V++ + + + L +++ Y GS ++ + G + P
Sbjct: 83 VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHP 142
Query: 115 V--------IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFD 166
+ + + + + YL +HRD+ A NIL+ +K++DFG+S +++
Sbjct: 143 DERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYE 202
Query: 167 AGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAH-GHAPFSKYPPMK 225
D R+ WMA E + H Y ++D+WSFG+ E+ G P+ PP +
Sbjct: 203 E-DSXVKRSQGRIPVKWMAIESLFD-HIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPER 260
Query: 226 V--LLMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPT 267
+ LL T G ER S+ L+ C ++P KRP
Sbjct: 261 LFNLLKT------GHRMERPDNCSEEMYRLMLQCWKQEPDKRPV 298
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 99/219 (45%), Gaps = 10/219 (4%)
Query: 17 RLYEEVGEGVSATVYRALCIPLN----EIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHP 72
+ +++G+G +V PL E+VA+K L L RE++ ++ H
Sbjct: 18 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHD 76
Query: 73 NVLRAH--CSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYL 130
N+++ C L ++M Y+ GS ++ + E + + + K + YL
Sbjct: 77 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEYL 135
Query: 131 HFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
+IHRD+ NIL+++ +K+ DFG++ + + + + W APE +
Sbjct: 136 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 195
Query: 191 QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLM 229
+ + +D+WSFG+ EL + SK PP + + M
Sbjct: 196 E-SKFSVASDVWSFGVVLYEL-FTYIEKSKSPPAEFMRM 232
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 99/219 (45%), Gaps = 10/219 (4%)
Query: 17 RLYEEVGEGVSATVYRALCIPLN----EIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHP 72
+ +++G+G +V PL E+VA+K L L RE++ ++ H
Sbjct: 20 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHD 78
Query: 73 NVLRAH--CSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYL 130
N+++ C L ++M Y+ GS ++ + E + + + K + YL
Sbjct: 79 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEYL 137
Query: 131 HFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
+IHRD+ NIL+++ +K+ DFG++ + + + + W APE +
Sbjct: 138 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 197
Query: 191 QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLM 229
+ + +D+WSFG+ EL + SK PP + + M
Sbjct: 198 E-SKFSVASDVWSFGVVLYEL-FTYIEKSKSPPAEFMRM 234
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 99/219 (45%), Gaps = 10/219 (4%)
Query: 17 RLYEEVGEGVSATVYRALCIPLN----EIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHP 72
+ +++G+G +V PL E+VA+K L L RE++ ++ H
Sbjct: 16 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHD 74
Query: 73 NVLRAH--CSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYL 130
N+++ C L ++M Y+ GS ++ + E + + + K + YL
Sbjct: 75 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEYL 133
Query: 131 HFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
+IHRD+ NIL+++ +K+ DFG++ + + + + W APE +
Sbjct: 134 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 191 QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLM 229
+ + +D+WSFG+ EL + SK PP + + M
Sbjct: 194 E-SKFSVASDVWSFGVVLYEL-FTYIEKSKSPPAEFMRM 230
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 105/235 (44%), Gaps = 12/235 (5%)
Query: 3 LVVEKRFPV--DAKDYRLYEEVGEGVSATVYRALCIPLN----EIVAIKVLDLEKCNNDL 56
+ E R P + + + +++G+G +V PL E+VA+K L L
Sbjct: 3 MAFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHL 61
Query: 57 DGIRREVQTMRVTNHPNVLRAH--CSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEP 114
RE++ ++ H N+++ C L ++M Y+ GS ++ + E +
Sbjct: 62 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK-HKERIDHI 120
Query: 115 VIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSR 174
+ + K + YL +IHRD+ NIL+++ +K+ DFG++ + + + +
Sbjct: 121 KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 180
Query: 175 NTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLM 229
W APE + + + +D+WSFG+ EL + SK PP + + M
Sbjct: 181 EPGESPIFWYAPESLTE-SKFSVASDVWSFGVVLYEL-FTYIEKSKSPPAEFMRM 233
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 101/224 (45%), Gaps = 10/224 (4%)
Query: 12 DAKDYRLYEEVGEGVSATVYRALCIPLN----EIVAIKVLDLEKCNNDLDGIRREVQTMR 67
+ + + +++G+G +V PL E+VA+K L L RE++ ++
Sbjct: 39 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILK 97
Query: 68 VTNHPNVLRAH--CSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
H N+++ C L ++M Y+ GS ++ + E + + + K
Sbjct: 98 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICK 156
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
+ YL +IHRD+ NIL+++ +K+ DFG++ + + + + W A
Sbjct: 157 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 216
Query: 186 PEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLM 229
PE + + + +D+WSFG+ EL + SK PP + + M
Sbjct: 217 PESLTE-SKFSVASDVWSFGVVLYEL-FTYIEKSKSPPAEFMRM 258
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 105/235 (44%), Gaps = 12/235 (5%)
Query: 3 LVVEKRFPV--DAKDYRLYEEVGEGVSATVYRALCIPLN----EIVAIKVLDLEKCNNDL 56
+ E R P + + + +++G+G +V PL E+VA+K L L
Sbjct: 1 MAFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHL 59
Query: 57 DGIRREVQTMRVTNHPNVLRAH--CSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEP 114
RE++ ++ H N+++ C L ++M Y+ GS ++ + E +
Sbjct: 60 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK-HKERIDHI 118
Query: 115 VIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSR 174
+ + K + YL +IHRD+ NIL+++ +K+ DFG++ + + + +
Sbjct: 119 KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 178
Query: 175 NTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLM 229
W APE + + + +D+WSFG+ EL + SK PP + + M
Sbjct: 179 EPGESPIFWYAPESLTE-SKFSVASDVWSFGVVLYEL-FTYIEKSKSPPAEFMRM 231
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 121/271 (44%), Gaps = 18/271 (6%)
Query: 8 RFPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMR 67
++ +D + +E+G G V+ + ++ VAIK + E ++ D I E + M
Sbjct: 4 KWVIDPSELTFVQEIGSGQFGLVHLGYWLNKDK-VAIKTIR-EGAMSEEDFIE-EAEVMM 60
Query: 68 VTNHPNVLRAH--CSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
+HP +++ + C CL V +M G CL F + + + +
Sbjct: 61 KLSHPKLVQLYGVCLEQAPICL--VFEFMEHG-CLSDYLRTQRGLFAAETLLGMCLDVCE 117
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPC-WM 184
+ YL IHRD+ A N L+ N IK++DFG++ + D Q + +T P W
Sbjct: 118 GMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVL---DDQYTSSTGTKFPVKWA 174
Query: 185 APEVMQQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERD 243
+PEV Y K+D+WSFG+ E+ + G P+ +V +++ G +
Sbjct: 175 SPEVF-SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV----VEDISTGFRLYKP 229
Query: 244 KRFSKSFKELVTACLVKDPKKRPTAEKLMKH 274
+ S +++ C + P+ RP +L++
Sbjct: 230 RLASTHVYQIMNHCWRERPEDRPAFSRLLRQ 260
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 93/213 (43%), Gaps = 19/213 (8%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR--REVQTMRVTNH 71
K Y+ + +G G V A L VAIK L N R RE+ M+V NH
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKVVNH 82
Query: 72 PNVLRAHCSFTTGHCL------WVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
N++ FT L ++VM M + + ++ LL + L
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-----LSQVIQMELDHERMSYLLYQMLV 137
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
+ +LH G IHRD+K NI++ S+ +K+ DFG++ AG +V T + A
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART---AGT-SFMMTPYVVTRYYRA 193
Query: 186 PEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
PEV+ + GY DIWS G+ E+ G F
Sbjct: 194 PEVILGM-GYKENVDIWSVGVIMGEMIKGGVLF 225
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 101/224 (45%), Gaps = 10/224 (4%)
Query: 12 DAKDYRLYEEVGEGVSATVYRALCIPLN----EIVAIKVLDLEKCNNDLDGIRREVQTMR 67
+ + + +++G+G +V PL E+VA+K L L RE++ ++
Sbjct: 8 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILK 66
Query: 68 VTNHPNVLRAH--CSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
H N+++ C L ++M Y+ GS ++ + E + + + K
Sbjct: 67 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICK 125
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
+ YL +IHRD+ NIL+++ +K+ DFG++ + + + + W A
Sbjct: 126 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 185
Query: 186 PEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLM 229
PE + + + +D+WSFG+ EL + SK PP + + M
Sbjct: 186 PESLTE-SKFSVASDVWSFGVVLYEL-FTYIEKSKSPPAEFMRM 227
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 101/224 (45%), Gaps = 10/224 (4%)
Query: 12 DAKDYRLYEEVGEGVSATVYRALCIPLN----EIVAIKVLDLEKCNNDLDGIRREVQTMR 67
+ + + +++G+G +V PL E+VA+K L L RE++ ++
Sbjct: 7 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILK 65
Query: 68 VTNHPNVLRAH--CSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
H N+++ C L ++M Y+ GS ++ + E + + + K
Sbjct: 66 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICK 124
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
+ YL +IHRD+ NIL+++ +K+ DFG++ + + + + W A
Sbjct: 125 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 184
Query: 186 PEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLM 229
PE + + + +D+WSFG+ EL + SK PP + + M
Sbjct: 185 PESLTE-SKFSVASDVWSFGVVLYEL-FTYIEKSKSPPAEFMRM 226
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 101/224 (45%), Gaps = 10/224 (4%)
Query: 12 DAKDYRLYEEVGEGVSATVYRALCIPLN----EIVAIKVLDLEKCNNDLDGIRREVQTMR 67
+ + + +++G+G +V PL E+VA+K L L RE++ ++
Sbjct: 6 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILK 64
Query: 68 VTNHPNVLRAH--CSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
H N+++ C L ++M Y+ GS ++ + E + + + K
Sbjct: 65 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICK 123
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
+ YL +IHRD+ NIL+++ +K+ DFG++ + + + + W A
Sbjct: 124 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 183
Query: 186 PEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLM 229
PE + + + +D+WSFG+ EL + SK PP + + M
Sbjct: 184 PESLTE-SKFSVASDVWSFGVVLYEL-FTYIEKSKSPPAEFMRM 225
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 122/284 (42%), Gaps = 38/284 (13%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLN-----EIVAIKVLDLEKCNNDLDGIRREVQTMRV 68
K+ L + +GEG V +A L VA+K+L ++L + E ++
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 69 TNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEG--------------FEEP 114
NHP+V++ + + + L +++ Y GS ++ + G + P
Sbjct: 83 VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHP 142
Query: 115 V--------IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFD 166
+ + + + + YL +HRD+ A NIL+ +K++DFG+S +++
Sbjct: 143 DERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYE 202
Query: 167 AGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAH-GHAPFSKYPPMK 225
D R+ WMA E + H Y ++D+WSFG+ E+ G P+ PP +
Sbjct: 203 E-DSXVKRSQGRIPVKWMAIESLFD-HIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPER 260
Query: 226 V--LLMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPT 267
+ LL T G ER S+ L+ C ++P KRP
Sbjct: 261 LFNLLKT------GHRMERPDNCSEEMYRLMLQCWKQEPDKRPV 298
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 119/280 (42%), Gaps = 20/280 (7%)
Query: 2 DLVVEKRFPVDAKDYRLYEEVGEGVSATVYRALCIPL-----NEIVAIKVLDLEKCNNDL 56
D+ V + V + + E+G+G VY + + VAIK ++ +
Sbjct: 13 DVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER 72
Query: 57 DGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVI 116
E M+ N +V+R + G V+M M G ++S PE PV+
Sbjct: 73 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 132
Query: 117 A--------TLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAG 168
A + E + YL+ + +HRD+ A N ++ + +K+ DFG++ +++
Sbjct: 133 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET- 191
Query: 169 DRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAH-GHAPFSKYPPMKVL 227
D R + WM+PE ++ + +D+WSFG+ E+A P+ +VL
Sbjct: 192 DYYRKGGKGLLPVRWMSPESLKD-GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL 250
Query: 228 LMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPT 267
++ GL + D F EL+ C +PK RP+
Sbjct: 251 RFVMEG---GLLDKPDNCPDMLF-ELMRMCWQYNPKMRPS 286
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 119/280 (42%), Gaps = 20/280 (7%)
Query: 2 DLVVEKRFPVDAKDYRLYEEVGEGVSATVYRALCIPL-----NEIVAIKVLDLEKCNNDL 56
D+ V + V + + E+G+G VY + + VAIK ++ +
Sbjct: 4 DVFVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER 63
Query: 57 DGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVI 116
E M+ N +V+R + G V+M M G ++S PE PV+
Sbjct: 64 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 123
Query: 117 A--------TLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAG 168
A + E + YL+ + +HRD+ A N ++ + +K+ DFG++ +++
Sbjct: 124 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET- 182
Query: 169 DRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAH-GHAPFSKYPPMKVL 227
D R + WM+PE ++ + +D+WSFG+ E+A P+ +VL
Sbjct: 183 DYYRKGGKGLLPVRWMSPESLKD-GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL 241
Query: 228 LMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPT 267
++ GL + D F EL+ C +PK RP+
Sbjct: 242 RFVMEG---GLLDKPDNCPDMLF-ELMRMCWQYNPKMRPS 277
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 98/230 (42%), Gaps = 13/230 (5%)
Query: 42 VAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLH 101
VAIK L E M +HPNV+ T + ++ +M GS
Sbjct: 64 VAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDS 123
Query: 102 IMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVS 161
++ + F + +LR + YL ++HRD+ A NIL++SN K++DFG+S
Sbjct: 124 FLRQNDGQ-FTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLS 182
Query: 162 ACMFDAGDRQRSRNTFVG-TPC-WMAPEVMQQLHGYDFKADIWSFGITALE-LAHGHAPF 218
+ D + G P W APE + Q + +D+WS+GI E +++G P+
Sbjct: 183 RFLEDDTSDPTYTSALGGKIPIRWTAPEAI-QYRKFTSASDVWSYGIVMWEVMSYGERPY 241
Query: 219 SKYPPMKVLLMTLQN--APPGLDYERDKRFSKSFKELVTACLVKDPKKRP 266
V+ Q+ PP +D + +L+ C KD RP
Sbjct: 242 WDMTNQDVINAIEQDYRLPPPMDC------PSALHQLMLDCWQKDRNHRP 285
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 119/268 (44%), Gaps = 18/268 (6%)
Query: 11 VDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTN 70
+D + +E+G G V+ + ++ VAIK + E ++ D I E + M +
Sbjct: 4 IDPSELTFVQEIGSGQFGLVHLGYWLNKDK-VAIKTIR-EGAMSEEDFIE-EAEVMMKLS 60
Query: 71 HPNVLRAH--CSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALV 128
HP +++ + C CL V +M G CL F + + + + +
Sbjct: 61 HPKLVQLYGVCLEQAPICL--VFEFMEHG-CLSDYLRTQRGLFAAETLLGMCLDVCEGMA 117
Query: 129 YLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPC-WMAPE 187
YL IHRD+ A N L+ N IK++DFG++ + D Q + +T P W +PE
Sbjct: 118 YLEEASVIHRDLAARNCLVGENQVIKVSDFGMTRFVL---DDQYTSSTGTKFPVKWASPE 174
Query: 188 VMQQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRF 246
V Y K+D+WSFG+ E+ + G P+ +V +++ G + +
Sbjct: 175 VF-SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV----VEDISTGFRLYKPRLA 229
Query: 247 SKSFKELVTACLVKDPKKRPTAEKLMKH 274
S +++ C + P+ RP +L++
Sbjct: 230 STHVYQIMNHCWKERPEDRPAFSRLLRQ 257
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 123/282 (43%), Gaps = 27/282 (9%)
Query: 8 RFPVDAKDYRLYE-EVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGI------R 60
R P A + YE ++G+G V++ + +VAIK L L + + I +
Sbjct: 12 RLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQ 71
Query: 61 REVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLH-IMKSAYPEGFEEPVIATL 119
REV M NHPN+++ + + VM ++ G H ++ A+P + V L
Sbjct: 72 REVFIMSNLNHPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLDKAHP--IKWSVKLRL 127
Query: 120 LRETLKALVYLHFHGH--IHRDVKAGNILI---DSNGAI--KLADFGVSACMFDAGDRQR 172
+ + + Y+ +HRD+++ NI + D N + K+ADF +S
Sbjct: 128 MLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ------QSVH 181
Query: 173 SRNTFVGTPCWMAPEVM-QQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTL 231
S + +G WMAPE + + Y KAD +SF + + G PF +Y K+ + +
Sbjct: 182 SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINM 241
Query: 232 QNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMK 273
GL + + ++ C DPKKRP ++K
Sbjct: 242 IRE-EGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVK 282
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 119/280 (42%), Gaps = 20/280 (7%)
Query: 2 DLVVEKRFPVDAKDYRLYEEVGEGVSATVYRALCIPL-----NEIVAIKVLDLEKCNNDL 56
D+ V + V + + E+G+G VY + + VAIK ++ +
Sbjct: 7 DVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER 66
Query: 57 DGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVI 116
E M+ N +V+R + G V+M M G ++S PE PV+
Sbjct: 67 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 126
Query: 117 A--------TLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAG 168
A + E + YL+ + +HRD+ A N ++ + +K+ DFG++ +++
Sbjct: 127 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET- 185
Query: 169 DRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAH-GHAPFSKYPPMKVL 227
D R + WM+PE ++ + +D+WSFG+ E+A P+ +VL
Sbjct: 186 DYYRKGGKGLLPVRWMSPESLKD-GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL 244
Query: 228 LMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPT 267
++ GL + D F EL+ C +PK RP+
Sbjct: 245 RFVMEG---GLLDKPDNCPDMLF-ELMRMCWQYNPKMRPS 280
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 101/224 (45%), Gaps = 10/224 (4%)
Query: 12 DAKDYRLYEEVGEGVSATVYRALCIPLN----EIVAIKVLDLEKCNNDLDGIRREVQTMR 67
+ + + +++G+G +V PL E+VA+K L L RE++ ++
Sbjct: 8 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILK 66
Query: 68 VTNHPNVLRAH--CSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
H N+++ C L ++M Y+ GS ++ + E + + + K
Sbjct: 67 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICK 125
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
+ YL +IHRD+ NIL+++ +K+ DFG++ + + + + W A
Sbjct: 126 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 185
Query: 186 PEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLM 229
PE + + + +D+WSFG+ EL + SK PP + + M
Sbjct: 186 PESLTE-SKFSVASDVWSFGVVLYEL-FTYIEKSKSPPAEFMRM 227
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 138/340 (40%), Gaps = 55/340 (16%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR--REVQTMRVTNH 71
K Y+ + +G G V A L VAIK L N R RE+ M+ NH
Sbjct: 26 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNH 84
Query: 72 PNVLRAHCSFTTGHCL------WVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
N++ FT L ++VM M C I + ++ LL + L
Sbjct: 85 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----LDHERMSYLLYQMLC 139
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNT------FVG 179
+ +LH G IHRD+K NI++ S+ +K+ DFG++ R+ T FV
Sbjct: 140 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA----------RTAGTSFMMVPFVV 189
Query: 180 TPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLD 239
T + APEV+ + GY DIWS G E+ G F PG D
Sbjct: 190 TRYYRAPEVILGM-GYKENVDIWSVGCIMGEMIKGGVLF-----------------PGTD 231
Query: 240 YERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFKHARSNDFLARSIVDNLAPLGE 299
+ +++K ++L T C K +PT +++ + + + D L P
Sbjct: 232 H--IDQWNKVIEQLGTPCPEFMKKLQPTVRTYVEN---RPKYAGYSFEKLFPDVLFPADS 286
Query: 300 RFRMLKAKEADLLVQNKALYEDKEQLSQQEYIRG--ISAW 337
LKA +A L+ + + +++S E ++ I+ W
Sbjct: 287 EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVW 326
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 136/334 (40%), Gaps = 43/334 (12%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR--REVQTMRVTNH 71
K Y+ + +G G V A L+ VAIK L N R RE+ M+ NH
Sbjct: 62 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNH 120
Query: 72 PNVLRAHCSFTTGHCL------WVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
N++ FT L ++VM M C I + ++ LL + L
Sbjct: 121 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----LDHERMSYLLYQMLC 175
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
+ +LH G IHRD+K NI++ S+ +K+ DFG++ +V T + A
Sbjct: 176 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMTPYVVTRYYRA 231
Query: 186 PEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKR 245
PEV+ + GY DIWS G E+ F PG DY +
Sbjct: 232 PEVILGM-GYKENVDIWSVGCIMGEMVRHKILF-----------------PGRDY--IDQ 271
Query: 246 FSKSFKELVTACLVKDPKKRPTAEKLMKHHFFKHARSNDFLARSIVDNLAPLGERFRMLK 305
++K ++L T C K +PT +++ + + + D+L P LK
Sbjct: 272 WNKVIEQLGTPCPEFMKKLQPTVRNYVEN---RPKYAGLTFPKLFPDSLFPADSEHNKLK 328
Query: 306 AKEADLLVQNKALYEDKEQLSQQEYIRG--ISAW 337
A +A L+ + + +++S + ++ I+ W
Sbjct: 329 ASQARDLLSKMLVIDPAKRISVDDALQHPYINVW 362
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 122/284 (42%), Gaps = 38/284 (13%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLN-----EIVAIKVLDLEKCNNDLDGIRREVQTMRV 68
K+ L + +GEG V +A L VA+K+L ++L + E ++
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 69 TNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEG--------------FEEP 114
NHP+V++ + + + L +++ Y GS ++ + G + P
Sbjct: 83 VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHP 142
Query: 115 V--------IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFD 166
+ + + + + YL +HRD+ A NIL+ +K++DFG+S +++
Sbjct: 143 DERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYE 202
Query: 167 AGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAH-GHAPFSKYPPMK 225
D R+ WMA E + H Y ++D+WSFG+ E+ G P+ PP +
Sbjct: 203 E-DSYVKRSQGRIPVKWMAIESLFD-HIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPER 260
Query: 226 V--LLMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPT 267
+ LL T G ER S+ L+ C ++P KRP
Sbjct: 261 LFNLLKT------GHRMERPDNCSEEMYRLMLQCWKQEPDKRPV 298
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 119/280 (42%), Gaps = 20/280 (7%)
Query: 2 DLVVEKRFPVDAKDYRLYEEVGEGVSATVYRALCIPL-----NEIVAIKVLDLEKCNNDL 56
D+ V + V + + E+G+G VY + + VAIK ++ +
Sbjct: 6 DVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER 65
Query: 57 DGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVI 116
E M+ N +V+R + G V+M M G ++S PE PV+
Sbjct: 66 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 125
Query: 117 A--------TLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAG 168
A + E + YL+ + +HRD+ A N ++ + +K+ DFG++ +++
Sbjct: 126 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET- 184
Query: 169 DRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAH-GHAPFSKYPPMKVL 227
D R + WM+PE ++ + +D+WSFG+ E+A P+ +VL
Sbjct: 185 DYYRKGGKGLLPVRWMSPESLKD-GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL 243
Query: 228 LMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPT 267
++ GL + D F EL+ C +PK RP+
Sbjct: 244 RFVMEG---GLLDKPDNCPDMLF-ELMRMCWQYNPKMRPS 279
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 101/224 (45%), Gaps = 10/224 (4%)
Query: 12 DAKDYRLYEEVGEGVSATVYRALCIPLN----EIVAIKVLDLEKCNNDLDGIRREVQTMR 67
+ + + +++G+G +V PL E+VA+K L L RE++ ++
Sbjct: 26 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILK 84
Query: 68 VTNHPNVLRAH--CSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
H N+++ C L ++M Y+ GS ++ + E + + + K
Sbjct: 85 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICK 143
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
+ YL +IHRD+ NIL+++ +K+ DFG++ + + + + W A
Sbjct: 144 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 203
Query: 186 PEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLM 229
PE + + + +D+WSFG+ EL + SK PP + + M
Sbjct: 204 PESLTE-SKFSVASDVWSFGVVLYEL-FTYIEKSKSPPAEFMRM 245
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 101/224 (45%), Gaps = 10/224 (4%)
Query: 12 DAKDYRLYEEVGEGVSATVYRALCIPLN----EIVAIKVLDLEKCNNDLDGIRREVQTMR 67
+ + + +++G+G +V PL E+VA+K L L RE++ ++
Sbjct: 26 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILK 84
Query: 68 VTNHPNVLRAH--CSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
H N+++ C L ++M Y+ GS ++ + E + + + K
Sbjct: 85 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICK 143
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
+ YL +IHRD+ NIL+++ +K+ DFG++ + + + + W A
Sbjct: 144 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 203
Query: 186 PEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLM 229
PE + + + +D+WSFG+ EL + SK PP + + M
Sbjct: 204 PESLTE-SKFSVASDVWSFGVVLYEL-FTYIEKSKSPPAEFMRM 245
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 121/271 (44%), Gaps = 18/271 (6%)
Query: 8 RFPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMR 67
++ +D + +E+G G V+ + ++ VAIK + E ++ D I E + M
Sbjct: 2 KWVIDPSELTFVQEIGSGQFGLVHLGYWLNKDK-VAIKTIR-EGAMSEEDFIE-EAEVMM 58
Query: 68 VTNHPNVLRAH--CSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
+HP +++ + C CL V +M G CL F + + + +
Sbjct: 59 KLSHPKLVQLYGVCLEQAPICL--VTEFMEHG-CLSDYLRTQRGLFAAETLLGMCLDVCE 115
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPC-WM 184
+ YL IHRD+ A N L+ N IK++DFG++ + D Q + +T P W
Sbjct: 116 GMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVL---DDQYTSSTGTKFPVKWA 172
Query: 185 APEVMQQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERD 243
+PEV Y K+D+WSFG+ E+ + G P+ +V +++ G +
Sbjct: 173 SPEVF-SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV----VEDISTGFRLYKP 227
Query: 244 KRFSKSFKELVTACLVKDPKKRPTAEKLMKH 274
+ S +++ C + P+ RP +L++
Sbjct: 228 RLASTHVYQIMNHCWRERPEDRPAFSRLLRQ 258
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 119/280 (42%), Gaps = 20/280 (7%)
Query: 2 DLVVEKRFPVDAKDYRLYEEVGEGVSATVYRALCIPL-----NEIVAIKVLDLEKCNNDL 56
D+ V + V + + E+G+G VY + + VAIK ++ +
Sbjct: 6 DVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER 65
Query: 57 DGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVI 116
E M+ N +V+R + G V+M M G ++S PE PV+
Sbjct: 66 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 125
Query: 117 A--------TLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAG 168
A + E + YL+ + +HRD+ A N ++ + +K+ DFG++ +++
Sbjct: 126 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET- 184
Query: 169 DRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAH-GHAPFSKYPPMKVL 227
D R + WM+PE ++ + +D+WSFG+ E+A P+ +VL
Sbjct: 185 DYYRKGGKGLLPVRWMSPESLKD-GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL 243
Query: 228 LMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPT 267
++ GL + D F EL+ C +PK RP+
Sbjct: 244 RFVMEG---GLLDKPDNCPDMLF-ELMRMCWQYNPKMRPS 279
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 119/280 (42%), Gaps = 20/280 (7%)
Query: 2 DLVVEKRFPVDAKDYRLYEEVGEGVSATVYRALCIPL-----NEIVAIKVLDLEKCNNDL 56
D+ V + V + + E+G+G VY + + VAIK ++ +
Sbjct: 35 DVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER 94
Query: 57 DGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVI 116
E M+ N +V+R + G V+M M G ++S PE PV+
Sbjct: 95 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 154
Query: 117 A--------TLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAG 168
A + E + YL+ + +HRD+ A N ++ + +K+ DFG++ +++
Sbjct: 155 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET- 213
Query: 169 DRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAH-GHAPFSKYPPMKVL 227
D R + WM+PE ++ + +D+WSFG+ E+A P+ +VL
Sbjct: 214 DYYRKGGKGLLPVRWMSPESLKD-GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL 272
Query: 228 LMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPT 267
++ GL + D F EL+ C +PK RP+
Sbjct: 273 RFVMEG---GLLDKPDNCPDMLF-ELMRMCWQYNPKMRPS 308
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 124/301 (41%), Gaps = 40/301 (13%)
Query: 16 YRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR-REVQTMRVTNHPNV 74
YR ++GEG VY+A+ NE VAIK + LE + G REV ++ H N+
Sbjct: 36 YRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNI 95
Query: 75 LRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHG 134
+ H L ++ Y ++ K+ VI + L + + + + H
Sbjct: 96 IELKSVIHHNHRLHLIFEYAENDLKKYMDKNP---DVSMRVIKSFLYQLINGVNFCHSRR 152
Query: 135 HIHRDVKAGNILIDSNGA-----IKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVM 189
+HRD+K N+L+ + A +K+ DFG+ A F RQ + + T + PE++
Sbjct: 153 CLHRDLKPQNLLLSVSDASETPVLKIGDFGL-ARAFGIPIRQFTHE--IITLWYRPPEIL 209
Query: 190 QQLHGYDFKADIWSFGITALELAHGHAPF-------SKYPPMKVLLMTLQNAPPGLDYER 242
Y DIWS E+ F + +VL + PG+
Sbjct: 210 LGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALP 269
Query: 243 DKRFS------KSFKELV------------TACLVKDPKKRPTAEKLMKHHFFKHARSND 284
D + S K+ K ++ TA L DP KR +A+ ++H +F H ND
Sbjct: 270 DWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSH---ND 326
Query: 285 F 285
F
Sbjct: 327 F 327
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 91/206 (44%), Gaps = 21/206 (10%)
Query: 22 VGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNH---PNVLRAH 78
VG G +V A L + VA+K L + L RR + +R+ H NV+
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVK--KLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 79 CSFTTGHCL------WVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHF 132
FT + ++V M G +I+KS + + + L+ + L+ L Y+H
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLM-GADLNNIVKS---QALSDEHVQFLVYQLLRGLKYIHS 149
Query: 133 HGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQL 192
G IHRD+K N+ ++ + +++ DFG+ A +V T + APE+M
Sbjct: 150 AGIIHRDLKPSNVAVNEDSELRILDFGL------ARQADEEMTGYVATRWYRAPEIMLNW 203
Query: 193 HGYDFKADIWSFGITALELAHGHAPF 218
Y+ DIWS G EL G A F
Sbjct: 204 MHYNQTVDIWSVGCIMAELLQGKALF 229
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 119/268 (44%), Gaps = 18/268 (6%)
Query: 11 VDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTN 70
+D + +E+G G V+ + ++ VAIK + E ++ D I E + M +
Sbjct: 4 IDPSELTFVQEIGSGQFGLVHLGYWLNKDK-VAIKTIR-EGAMSEEDFIE-EAEVMMKLS 60
Query: 71 HPNVLRAH--CSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALV 128
HP +++ + C CL V +M G CL F + + + + +
Sbjct: 61 HPKLVQLYGVCLEQAPICL--VFEFMEHG-CLSDYLRTQRGLFAAETLLGMCLDVCEGMA 117
Query: 129 YLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPC-WMAPE 187
YL IHRD+ A N L+ N IK++DFG++ + D Q + +T P W +PE
Sbjct: 118 YLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVL---DDQYTSSTGTKFPVKWASPE 174
Query: 188 VMQQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRF 246
V Y K+D+WSFG+ E+ + G P+ +V +++ G + +
Sbjct: 175 VF-SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV----VEDISTGFRLYKPRLA 229
Query: 247 SKSFKELVTACLVKDPKKRPTAEKLMKH 274
S +++ C + P+ RP +L++
Sbjct: 230 STHVYQIMNHCWKERPEDRPAFSRLLRQ 257
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 118/268 (44%), Gaps = 18/268 (6%)
Query: 11 VDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTN 70
+D + +E+G G V+ + ++ VAIK + ++ + D E + M +
Sbjct: 24 IDPSELTFVQEIGSGQFGLVHLGYWLNKDK-VAIKTI--KEGSMSEDDFIEEAEVMMKLS 80
Query: 71 HPNVLRAH--CSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALV 128
HP +++ + C CL V +M G CL F + + + + +
Sbjct: 81 HPKLVQLYGVCLEQAPICL--VFEFMEHG-CLSDYLRTQRGLFAAETLLGMCLDVCEGMA 137
Query: 129 YLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPC-WMAPE 187
YL IHRD+ A N L+ N IK++DFG++ + D Q + +T P W +PE
Sbjct: 138 YLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVL---DDQYTSSTGTKFPVKWASPE 194
Query: 188 VMQQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRF 246
V Y K+D+WSFG+ E+ + G P+ +V +++ G + +
Sbjct: 195 VF-SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV----VEDISTGFRLYKPRLA 249
Query: 247 SKSFKELVTACLVKDPKKRPTAEKLMKH 274
S +++ C + P+ RP +L++
Sbjct: 250 STHVYQIMNHCWKERPEDRPAFSRLLRQ 277
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 135/334 (40%), Gaps = 43/334 (12%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR--REVQTMRVTNH 71
K Y+ + +G G V A L VAIK L N R RE+ M+ NH
Sbjct: 25 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNH 83
Query: 72 PNVLRAHCSFTTGHCL------WVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
N++ FT L ++VM M C I + ++ LL + L
Sbjct: 84 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----LDHERMSYLLYQMLC 138
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
+ +LH G IHRD+K NI++ S+ +K+ DFG++ +V T + A
Sbjct: 139 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMTPYVVTRYYRA 194
Query: 186 PEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKR 245
PEV+ + GY DIWS G E+ G F PG D+ +
Sbjct: 195 PEVILGM-GYKENVDIWSVGCIMGEMIKGGVLF-----------------PGTDH--IDQ 234
Query: 246 FSKSFKELVTACLVKDPKKRPTAEKLMKHHFFKHARSNDFLARSIVDNLAPLGERFRMLK 305
++K ++L T C K +PT +++ + + + D L P LK
Sbjct: 235 WNKVIEQLGTPCPEFMKKLQPTVRTYVEN---RPKYAGYSFEKLFPDVLFPADSEHNKLK 291
Query: 306 AKEADLLVQNKALYEDKEQLSQQEYIRG--ISAW 337
A +A L+ + + +++S E ++ I+ W
Sbjct: 292 ASQARDLLSKMLVIDASKRISVDEALQHPYINVW 325
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 136/334 (40%), Gaps = 43/334 (12%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR--REVQTMRVTNH 71
K Y+ + +G G V A L+ VAIK L N R RE+ M+ NH
Sbjct: 62 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNH 120
Query: 72 PNVLRAHCSFTTGHCL------WVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
N++ FT L ++VM M C I + ++ LL + L
Sbjct: 121 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----LDHERMSYLLYQMLC 175
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
+ +LH G IHRD+K NI++ S+ +K+ DFG++ +V T + A
Sbjct: 176 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMTPYVVTRYYRA 231
Query: 186 PEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKR 245
PEV+ + GY DIWS G E+ F PG DY +
Sbjct: 232 PEVILGM-GYKENVDIWSVGCIMGEMVRHKILF-----------------PGRDY--IDQ 271
Query: 246 FSKSFKELVTACLVKDPKKRPTAEKLMKHHFFKHARSNDFLARSIVDNLAPLGERFRMLK 305
++K ++L T C K +PT +++ + + + D+L P LK
Sbjct: 272 WNKVIEQLGTPCPEFMKKLQPTVRNYVEN---RPKYAGLTFPKLFPDSLFPADSEHNKLK 328
Query: 306 AKEADLLVQNKALYEDKEQLSQQEYIRG--ISAW 337
A +A L+ + + +++S + ++ I+ W
Sbjct: 329 ASQARDLLSKMLVIDPAKRISVDDALQHPYINVW 362
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 120/286 (41%), Gaps = 38/286 (13%)
Query: 4 VVEKRFPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREV 63
V+KRF +D K+ L +G G V++A + IK + K NN+ REV
Sbjct: 4 TVDKRFGMDFKEIEL---IGSGGFGQVFKAKHRIDGKTYVIKRV---KYNNE--KAEREV 55
Query: 64 QTMRVTNHPNVLR----------------AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAY 107
+ + +H N++ + S + CL++ M + G+ ++
Sbjct: 56 KALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR 115
Query: 108 PEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDA 167
E ++ + L + K + Y+H I+RD+K NI + +K+ DFG+ + +
Sbjct: 116 GEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKND 175
Query: 168 GDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVL 227
G R RS+ GT +M+PE + Y + D+++ G+ EL H + + K
Sbjct: 176 GKRXRSK----GTLRYMSPEQISS-QDYGKEVDLYALGLILAELLH--VCDTAFETSKFF 228
Query: 228 LMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMK 273
+ F K K L+ L K P+ RP ++++
Sbjct: 229 TDLRDGIISDI-------FDKKEKTLLQKLLSKKPEDRPNTSEILR 267
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 120/287 (41%), Gaps = 36/287 (12%)
Query: 13 AKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHP 72
A D+ +G+G V +A + AIK + L I EV + NH
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIK--KIRHTEEKLSTILSEVXLLASLNHQ 62
Query: 73 NVLRAHCSFTTGHCLWVVMPYMAGGSCLHIM------KSAYPEGFEEPV------IATLL 120
V+R + ++ + S L I ++ Y E + L
Sbjct: 63 YVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLF 122
Query: 121 RETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGD--RQRSRN--- 175
R+ L+AL Y+H G IHR++K NI ID + +K+ DFG++ + + D + S+N
Sbjct: 123 RQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPG 182
Query: 176 ------TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLM 229
+ +GT ++A EV+ Y+ K D +S GI E + PFS +L
Sbjct: 183 SSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIY---PFSTGXERVNILK 239
Query: 230 TLQNA----PPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLM 272
L++ PP D + K K+++ + DP KRP A L+
Sbjct: 240 KLRSVSIEFPPDFDDNK----XKVEKKIIRLLIDHDPNKRPGARTLL 282
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 136/334 (40%), Gaps = 43/334 (12%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR--REVQTMRVTNH 71
K Y+ + +G G V A L+ VAIK L N R RE+ M+ NH
Sbjct: 25 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNH 83
Query: 72 PNVLRAHCSFTTGHCL------WVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
N++ FT L ++VM M C I + ++ LL + L
Sbjct: 84 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----LDHERMSYLLYQMLC 138
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
+ +LH G IHRD+K NI++ S+ +K+ DFG++ +V T + A
Sbjct: 139 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMTPYVVTRYYRA 194
Query: 186 PEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKR 245
PEV+ + GY DIWS G E+ F PG DY +
Sbjct: 195 PEVILGM-GYKENVDIWSVGCIMGEMVRHKILF-----------------PGRDY--IDQ 234
Query: 246 FSKSFKELVTACLVKDPKKRPTAEKLMKHHFFKHARSNDFLARSIVDNLAPLGERFRMLK 305
++K ++L T C K +PT +++ + + + D+L P LK
Sbjct: 235 WNKVIEQLGTPCPEFMKKLQPTVRNYVEN---RPKYAGLTFPKLFPDSLFPADSEHNKLK 291
Query: 306 AKEADLLVQNKALYEDKEQLSQQEYIRG--ISAW 337
A +A L+ + + +++S + ++ I+ W
Sbjct: 292 ASQARDLLSKMLVIDPAKRISVDDALQHPYINVW 325
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 119/268 (44%), Gaps = 18/268 (6%)
Query: 11 VDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTN 70
+D + +E+G G V+ + ++ VAIK + E ++ D I E + M +
Sbjct: 2 IDPSELTFVQEIGSGQFGLVHLGYWLNKDK-VAIKTIR-EGAMSEEDFIE-EAEVMMKLS 58
Query: 71 HPNVLRAH--CSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALV 128
HP +++ + C CL V +M G CL F + + + + +
Sbjct: 59 HPKLVQLYGVCLEQAPICL--VFEFMEHG-CLSDYLRTQRGLFAAETLLGMCLDVCEGMA 115
Query: 129 YLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPC-WMAPE 187
YL IHRD+ A N L+ N IK++DFG++ + D Q + +T P W +PE
Sbjct: 116 YLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVL---DDQYTSSTGTKFPVKWASPE 172
Query: 188 VMQQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRF 246
V Y K+D+WSFG+ E+ + G P+ +V +++ G + +
Sbjct: 173 VF-SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV----VEDISTGFRLYKPRLA 227
Query: 247 SKSFKELVTACLVKDPKKRPTAEKLMKH 274
S +++ C + P+ RP +L++
Sbjct: 228 STHVYQIMNHCWKERPEDRPAFSRLLRQ 255
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 139/339 (41%), Gaps = 53/339 (15%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR--REVQTMRVTNH 71
K Y+ + +G G V A L VAIK L N R RE+ M+ NH
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNH 82
Query: 72 PNVLRAHCSFTTGHCL------WVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
N++ FT L ++VM M C I + ++ LL + L
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----LDHERMSYLLYQMLC 137
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTP---- 181
+ +LH G IHRD+K NI++ S+ +K+ DFG++ + + +F+ TP
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA---------RTAGTSFMMTPEVVT 188
Query: 182 -CWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDY 240
+ APEV+ + GY DIWS G E+ G F PG D+
Sbjct: 189 RYYRAPEVILGM-GYKENVDIWSVGCIMGEMIKGGVLF-----------------PGTDH 230
Query: 241 ERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFKHARSNDFLARSIVDNLAPLGER 300
+++K ++L T C K +PT +++ + + + D L P
Sbjct: 231 --IDQWNKVIEQLGTPCPEFMKKLQPTVRTYVEN---RPKYAGYSFEKLFPDVLFPADSE 285
Query: 301 FRMLKAKEADLLVQNKALYEDKEQLSQQEYIRG--ISAW 337
LKA +A L+ + + +++S E ++ I+ W
Sbjct: 286 HNALKASQARDLLSKMLVIDASKRISVDEALQHPYINVW 324
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 136/334 (40%), Gaps = 43/334 (12%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR--REVQTMRVTNH 71
K Y+ + +G G V A L+ VAIK L N R RE+ M+ NH
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNH 82
Query: 72 PNVLRAHCSFTTGHCL------WVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
N++ FT L ++VM M C I + ++ LL + L
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----LDHERMSYLLYQMLC 137
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
+ +LH G IHRD+K NI++ S+ +K+ DFG++ +V T + A
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMTPYVVTRYYRA 193
Query: 186 PEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKR 245
PEV+ + GY DIWS G E+ F PG DY +
Sbjct: 194 PEVILGM-GYKENVDIWSVGCIMGEMVRHKILF-----------------PGRDY--IDQ 233
Query: 246 FSKSFKELVTACLVKDPKKRPTAEKLMKHHFFKHARSNDFLARSIVDNLAPLGERFRMLK 305
++K ++L T C K +PT +++ + + + D+L P LK
Sbjct: 234 WNKVIEQLGTPCPEFMKKLQPTVRNYVEN---RPKYAGLTFPKLFPDSLFPADSEHNKLK 290
Query: 306 AKEADLLVQNKALYEDKEQLSQQEYIRG--ISAW 337
A +A L+ + + +++S + ++ I+ W
Sbjct: 291 ASQARDLLSKMLVIDPAKRISVDDALQHPYINVW 324
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 135/334 (40%), Gaps = 43/334 (12%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR--REVQTMRVTNH 71
K Y+ + +G G V A L VAIK L N R RE+ M+ NH
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNH 82
Query: 72 PNVLRAHCSFTTGHCL------WVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
N++ FT L ++VM M C I + ++ LL + L
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----LDHERMSYLLYQMLC 137
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
+ +LH G IHRD+K NI++ S+ +K+ DFG++ +V T + A
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMTPYVVTRYYRA 193
Query: 186 PEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKR 245
PEV+ + GY DIWS G E+ G F PG D+ +
Sbjct: 194 PEVILGM-GYKENVDIWSVGCIMGEMIKGGVLF-----------------PGTDH--IDQ 233
Query: 246 FSKSFKELVTACLVKDPKKRPTAEKLMKHHFFKHARSNDFLARSIVDNLAPLGERFRMLK 305
++K ++L T C K +PT +++ + + + D L P LK
Sbjct: 234 WNKVIEQLGTPCPEFMKKLQPTVRTYVEN---RPKYAGYSFEKLFPDVLFPADSEHNKLK 290
Query: 306 AKEADLLVQNKALYEDKEQLSQQEYIRG--ISAW 337
A +A L+ + + +++S E ++ I+ W
Sbjct: 291 ASQARDLLSKMLVIDASKRISVDEALQHPYINVW 324
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 118/280 (42%), Gaps = 20/280 (7%)
Query: 2 DLVVEKRFPVDAKDYRLYEEVGEGVSATVYRALCIPL-----NEIVAIKVLDLEKCNNDL 56
D+ V + V + + E+G+G VY + + VAIK ++ +
Sbjct: 7 DVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER 66
Query: 57 DGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVI 116
E M+ N +V+R + G V+M M G ++S PE PV+
Sbjct: 67 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 126
Query: 117 A--------TLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAG 168
A + E + YL+ + +HRD+ A N ++ + +K+ DFG++ + +
Sbjct: 127 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXET- 185
Query: 169 DRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAH-GHAPFSKYPPMKVL 227
D R + WM+PE ++ + +D+WSFG+ E+A P+ +VL
Sbjct: 186 DXXRKGGKGLLPVRWMSPESLKD-GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL 244
Query: 228 LMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPT 267
++ GL + D F EL+ C +PK RP+
Sbjct: 245 RFVMEG---GLLDKPDNCPDMLF-ELMRMCWQYNPKMRPS 280
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 136/334 (40%), Gaps = 43/334 (12%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR--REVQTMRVTNH 71
K Y+ + +G G V A L+ VAIK L N R RE+ M+ NH
Sbjct: 25 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNH 83
Query: 72 PNVLRAHCSFTTGHCL------WVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
N++ FT L ++VM M C I + ++ LL + L
Sbjct: 84 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----LDHERMSYLLYQMLC 138
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
+ +LH G IHRD+K NI++ S+ +K+ DFG++ +V T + A
Sbjct: 139 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMTPYVVTRYYRA 194
Query: 186 PEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKR 245
PEV+ + GY DIWS G E+ F PG DY +
Sbjct: 195 PEVILGM-GYKENVDIWSVGCIMGEMVRHKILF-----------------PGRDY--IDQ 234
Query: 246 FSKSFKELVTACLVKDPKKRPTAEKLMKHHFFKHARSNDFLARSIVDNLAPLGERFRMLK 305
++K ++L T C K +PT +++ + + + D+L P LK
Sbjct: 235 WNKVIEQLGTPCPEFMKKLQPTVRNYVEN---RPKYAGLTFPKLFPDSLFPADSEHNKLK 291
Query: 306 AKEADLLVQNKALYEDKEQLSQQEYIRG--ISAW 337
A +A L+ + + +++S + ++ I+ W
Sbjct: 292 ASQARDLLSKMLVIDPAKRISVDDALQHPYINVW 325
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 136/334 (40%), Gaps = 43/334 (12%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR--REVQTMRVTNH 71
K Y+ + +G G V A L+ VAIK L N R RE+ M+ NH
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNH 82
Query: 72 PNVLRAHCSFTTGHCL------WVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
N++ FT L ++VM M C I + ++ LL + L
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----LDHERMSYLLYQMLC 137
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
+ +LH G IHRD+K NI++ S+ +K+ DFG++ +V T + A
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMTPYVVTRYYRA 193
Query: 186 PEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKR 245
PEV+ + GY DIWS G E+ F PG DY +
Sbjct: 194 PEVILGM-GYKENVDIWSVGCIMGEMVRHKILF-----------------PGRDY--IDQ 233
Query: 246 FSKSFKELVTACLVKDPKKRPTAEKLMKHHFFKHARSNDFLARSIVDNLAPLGERFRMLK 305
++K ++L T C K +PT +++ + + + D+L P LK
Sbjct: 234 WNKVIEQLGTPCPEFMKKLQPTVRNYVEN---RPKYAGLTFPKLFPDSLFPADSEHNKLK 290
Query: 306 AKEADLLVQNKALYEDKEQLSQQEYIRG--ISAW 337
A +A L+ + + +++S + ++ I+ W
Sbjct: 291 ASQARDLLSKMLVIDPAKRISVDDALQHPYINVW 324
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 136/334 (40%), Gaps = 43/334 (12%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR--REVQTMRVTNH 71
K Y+ + +G G V A L+ VAIK L N R RE+ M+ NH
Sbjct: 23 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNH 81
Query: 72 PNVLRAHCSFTTGHCL------WVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
N++ FT L ++VM M C I + ++ LL + L
Sbjct: 82 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----LDHERMSYLLYQMLC 136
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
+ +LH G IHRD+K NI++ S+ +K+ DFG++ +V T + A
Sbjct: 137 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMTPYVVTRYYRA 192
Query: 186 PEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKR 245
PEV+ + GY DIWS G E+ F PG DY +
Sbjct: 193 PEVILGM-GYKENVDIWSVGCIMGEMVRHKILF-----------------PGRDY--IDQ 232
Query: 246 FSKSFKELVTACLVKDPKKRPTAEKLMKHHFFKHARSNDFLARSIVDNLAPLGERFRMLK 305
++K ++L T C K +PT +++ + + + D+L P LK
Sbjct: 233 WNKVIEQLGTPCPEFMKKLQPTVRNYVEN---RPKYAGLTFPKLFPDSLFPADSEHNKLK 289
Query: 306 AKEADLLVQNKALYEDKEQLSQQEYIRG--ISAW 337
A +A L+ + + +++S + ++ I+ W
Sbjct: 290 ASQARDLLSKMLVIDPAKRISVDDALQHPYINVW 323
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 136/334 (40%), Gaps = 43/334 (12%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR--REVQTMRVTNH 71
K Y+ + +G G V A L+ VAIK L N R RE+ M+ NH
Sbjct: 18 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNH 76
Query: 72 PNVLRAHCSFTTGHCL------WVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
N++ FT L ++VM M C I + ++ LL + L
Sbjct: 77 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----LDHERMSYLLYQMLC 131
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
+ +LH G IHRD+K NI++ S+ +K+ DFG++ +V T + A
Sbjct: 132 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMTPYVVTRYYRA 187
Query: 186 PEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKR 245
PEV+ + GY DIWS G E+ F PG DY +
Sbjct: 188 PEVILGM-GYKENVDIWSVGCIMGEMVRHKILF-----------------PGRDY--IDQ 227
Query: 246 FSKSFKELVTACLVKDPKKRPTAEKLMKHHFFKHARSNDFLARSIVDNLAPLGERFRMLK 305
++K ++L T C K +PT +++ + + + D+L P LK
Sbjct: 228 WNKVIEQLGTPCPEFMKKLQPTVRNYVEN---RPKYAGLTFPKLFPDSLFPADSEHNKLK 284
Query: 306 AKEADLLVQNKALYEDKEQLSQQEYIRG--ISAW 337
A +A L+ + + +++S + ++ I+ W
Sbjct: 285 ASQARDLLSKMLVIDPAKRISVDDALQHPYINVW 318
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 136/334 (40%), Gaps = 43/334 (12%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR--REVQTMRVTNH 71
K Y+ + +G G V A L+ VAIK L N R RE+ M+ NH
Sbjct: 18 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNH 76
Query: 72 PNVLRAHCSFTTGHCL------WVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
N++ FT L ++VM M C I + ++ LL + L
Sbjct: 77 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----LDHERMSYLLYQMLC 131
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
+ +LH G IHRD+K NI++ S+ +K+ DFG++ +V T + A
Sbjct: 132 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMTPYVVTRYYRA 187
Query: 186 PEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKR 245
PEV+ + GY DIWS G E+ F PG DY +
Sbjct: 188 PEVILGM-GYKENVDIWSVGCIMGEMVRHKILF-----------------PGRDY--IDQ 227
Query: 246 FSKSFKELVTACLVKDPKKRPTAEKLMKHHFFKHARSNDFLARSIVDNLAPLGERFRMLK 305
++K ++L T C K +PT +++ + + + D+L P LK
Sbjct: 228 WNKVIEQLGTPCPEFMKKLQPTVRNYVEN---RPKYAGLTFPKLFPDSLFPADSEHNKLK 284
Query: 306 AKEADLLVQNKALYEDKEQLSQQEYIRG--ISAW 337
A +A L+ + + +++S + ++ I+ W
Sbjct: 285 ASQARDLLSKMLVIDPAKRISVDDALQHPYINVW 318
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 100/224 (44%), Gaps = 10/224 (4%)
Query: 12 DAKDYRLYEEVGEGVSATVYRALCIPLN----EIVAIKVLDLEKCNNDLDGIRREVQTMR 67
+ + + ++G+G +V PL E+VA+K L L RE++ ++
Sbjct: 11 EERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILK 69
Query: 68 VTNHPNVLRAH--CSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
H N+++ C L ++M ++ GS ++ + E + + + K
Sbjct: 70 SLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQK-HKERIDHIKLLQYTSQICK 128
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
+ YL +IHRD+ NIL+++ +K+ DFG++ + + + + W A
Sbjct: 129 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 188
Query: 186 PEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLM 229
PE + + + +D+WSFG+ EL + SK PP + + M
Sbjct: 189 PESLTE-SKFSVASDVWSFGVVLYEL-FTYIEKSKSPPAEFMRM 230
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 136/334 (40%), Gaps = 43/334 (12%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR--REVQTMRVTNH 71
K Y+ + +G G V A L+ VAIK L N R RE+ M+ NH
Sbjct: 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNH 75
Query: 72 PNVLRAHCSFTTGHCL------WVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
N++ FT L ++VM M C I + ++ LL + L
Sbjct: 76 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----LDHERMSYLLYQMLC 130
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
+ +LH G IHRD+K NI++ S+ +K+ DFG++ +V T + A
Sbjct: 131 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMTPYVVTRYYRA 186
Query: 186 PEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKR 245
PEV+ + GY DIWS G E+ F PG DY +
Sbjct: 187 PEVILGM-GYKENVDIWSVGCIMGEMVRHKILF-----------------PGRDY--IDQ 226
Query: 246 FSKSFKELVTACLVKDPKKRPTAEKLMKHHFFKHARSNDFLARSIVDNLAPLGERFRMLK 305
++K ++L T C K +PT +++ + + + D+L P LK
Sbjct: 227 WNKVIEQLGTPCPEFMKKLQPTVRNYVEN---RPKYAGLTFPKLFPDSLFPADSEHNKLK 283
Query: 306 AKEADLLVQNKALYEDKEQLSQQEYIRG--ISAW 337
A +A L+ + + +++S + ++ I+ W
Sbjct: 284 ASQARDLLSKMLVIDPAKRISVDDALQHPYINVW 317
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 92/213 (43%), Gaps = 19/213 (8%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR--REVQTMRVTNH 71
K Y+ + +G G V A L VAIK L N R RE+ M+V NH
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKVVNH 82
Query: 72 PNVLRAHCSFTTGHCL------WVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
N++ FT L ++VM M + + ++ LL + L
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-----LSQVIQMELDHERMSYLLYQMLV 137
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
+ +LH G IHRD+K NI++ S+ +K+ DFG++ AG +V T + A
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART---AGT-SFMMTPYVVTRYYRA 193
Query: 186 PEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
PEV+ + GY DIWS G E+ G F
Sbjct: 194 PEVILGM-GYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 101/224 (45%), Gaps = 10/224 (4%)
Query: 12 DAKDYRLYEEVGEGVSATVYRALCIPLN----EIVAIKVLDLEKCNNDLDGIRREVQTMR 67
+ + + +++G+G +V PL E+VA+K L L RE++ ++
Sbjct: 8 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILK 66
Query: 68 VTNHPNVLRAH--CSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
H N+++ C L ++M Y+ GS ++ + E + + + K
Sbjct: 67 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICK 125
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
+ YL +IHRD+ NIL+++ +K+ DFG++ + + + + W A
Sbjct: 126 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYA 185
Query: 186 PEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLM 229
PE + + + +D+WSFG+ EL + SK PP + + M
Sbjct: 186 PESLTE-SKFSVASDVWSFGVVLYEL-FTYIEKSKSPPAEFMRM 227
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 120/274 (43%), Gaps = 26/274 (9%)
Query: 11 VDAKDYRLYEEVGEGVSATVYRALC---IPLNE--IVAIKVLDLEKCNNDLDGIRREVQT 65
+ +D L E+GEG V+ A C +P + +VA+K L E + +RE +
Sbjct: 38 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALK-EASESARQDFQREAEL 96
Query: 66 MRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPE-----GFEE----PV- 115
+ + H +++R T G L +V YM G ++S P+ G E+ P+
Sbjct: 97 LTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLG 156
Query: 116 ---IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQR 172
+ + + +VYL +HRD+ N L+ +K+ DFG+S ++ D R
Sbjct: 157 LGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYST-DYYR 215
Query: 173 SRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTL 231
+ WM PE + + ++D+WSFG+ E+ +G P+ + + +
Sbjct: 216 VGGRTMLPIRWMPPESI-LYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCIT 274
Query: 232 QNAPPGLDYERDKRFSKSFKELVTACLVKDPKKR 265
Q G + ER + ++ C ++P++R
Sbjct: 275 Q----GRELERPRACPPEVYAIMRGCWQREPQQR 304
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 127/308 (41%), Gaps = 42/308 (13%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR--REVQTMRVTNH 71
K Y+ + +G G V A L+ VAIK L N R RE+ M+ NH
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKXVNH 82
Query: 72 PNVLRAHCSFTTGHCL------WVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
N++ FT L ++VM M C I + ++ LL + L
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----LDHERMSYLLYQMLC 137
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
+ +LH G IHRD+K NI++ S+ +K+ DFG++ AG +V T + A
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART---AGT-SFMMTPYVVTRYYRA 193
Query: 186 PEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKR 245
PEV+ + GY DIWS G E+ F PG DY +
Sbjct: 194 PEVILGM-GYKENVDIWSVGCIMGEMVRHKILF-----------------PGRDY--IDQ 233
Query: 246 FSKSFKELVTACLVKDPKKRPTAEKLMKHHFFKHARSNDFLARSIVDNLAPLGERFRMLK 305
++K ++L T C K +PT +++ + + + D+L P LK
Sbjct: 234 WNKVIEQLGTPCPEFMKKLQPTVRNYVEN---RPKYAGLTFPKLFPDSLFPADSEHNKLK 290
Query: 306 AKEA-DLL 312
A +A DLL
Sbjct: 291 ASQARDLL 298
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 123/273 (45%), Gaps = 31/273 (11%)
Query: 21 EVGEGVSATVYRALC----IPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLR 76
++GEG VY+ + + ++ A+ + E+ D +E++ M H N++
Sbjct: 38 KMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFD---QEIKVMAKCQHENLVE 94
Query: 77 AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETL-----KALVYLH 131
+ G L +V YM GS L + +G P ++ +R + + +LH
Sbjct: 95 LLGFSSDGDDLCLVYVYMPNGSLLDRLSCL--DG--TPPLSWHMRCKIAQGAANGINFLH 150
Query: 132 FHGHIHRDVKAGNILIDSNGAIKLADFGVS-ACMFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
+ HIHRD+K+ NIL+D K++DFG++ A A SR VGT +MAPE ++
Sbjct: 151 ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSR--IVGTTAYMAPEALR 208
Query: 191 QLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLL----MTLQNAPPGLDY------ 240
K+DI+SFG+ LE+ G ++ ++LL DY
Sbjct: 209 G--EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMN 266
Query: 241 ERDKRFSKSFKELVTACLVKDPKKRPTAEKLMK 273
+ D ++ + + CL + KRP +K+ +
Sbjct: 267 DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQ 299
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 112/261 (42%), Gaps = 20/261 (7%)
Query: 21 EVGEGVSATVYRALCIPL-----NEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVL 75
E+G+G VY + + VAIK ++ + E M+ N +V+
Sbjct: 19 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 78
Query: 76 RAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIA--------TLLRETLKAL 127
R + G V+M M G ++S PE PV+A + E +
Sbjct: 79 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 128 VYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPE 187
YL+ + +HRD+ A N ++ + +K+ DFG++ +++ D R + WM+PE
Sbjct: 139 AYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET-DYYRKGGKGLLPVRWMSPE 197
Query: 188 VMQQLHGYDFKADIWSFGITALELAH-GHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRF 246
++ + +D+WSFG+ E+A P+ +VL ++ GL + D
Sbjct: 198 SLKD-GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG---GLLDKPDNCP 253
Query: 247 SKSFKELVTACLVKDPKKRPT 267
F EL+ C +PK RP+
Sbjct: 254 DMLF-ELMRMCWQYNPKMRPS 273
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 90/213 (42%), Gaps = 19/213 (8%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR--REVQTMRVTNH 71
K Y+ + +G G V A L VAIK L N R RE+ M+ NH
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNH 82
Query: 72 PNVLRAHCSFTTGHCL------WVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
N++ FT L ++VM M C I + ++ LL + L
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----LDHERMSYLLYQMLC 137
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
+ +LH G IHRD+K NI++ S+ +K+ DFG++ +V T + A
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMTPYVVTRYYRA 193
Query: 186 PEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
PEV+ + GY DIWS G E+ G F
Sbjct: 194 PEVILGM-GYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 118/280 (42%), Gaps = 20/280 (7%)
Query: 2 DLVVEKRFPVDAKDYRLYEEVGEGVSATVYRALCIPL-----NEIVAIKVLDLEKCNNDL 56
D+ V + V + + E+G+G VY + + VAIK ++ +
Sbjct: 13 DVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER 72
Query: 57 DGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVI 116
E M+ N +V+R + G V+M M G ++S P PV+
Sbjct: 73 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVL 132
Query: 117 A--------TLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAG 168
A + E + YL+ + +HRD+ A N ++ + +K+ DFG++ +++
Sbjct: 133 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET- 191
Query: 169 DRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAH-GHAPFSKYPPMKVL 227
D R + WM+PE ++ + +D+WSFG+ E+A P+ +VL
Sbjct: 192 DYYRKGGKGLLPVRWMSPESLKD-GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL 250
Query: 228 LMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPT 267
++ GL + D F EL+ C +PK RP+
Sbjct: 251 RFVMEG---GLLDKPDNCPDMLF-ELMRMCWQYNPKMRPS 286
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 103/232 (44%), Gaps = 36/232 (15%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIK-VLDLEKCNNDLDGIRREVQTM------ 66
+ Y L +++G+G V++++ E+VA+K + D + + D RE+ +
Sbjct: 9 RKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGH 68
Query: 67 -RVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIAT-LLRETL 124
+ N NVLRA +++V YM + LH + A EPV ++ + +
Sbjct: 69 ENIVNLLNVLRA----DNDRDVYLVFDYME--TDLHAVIRA---NILEPVHKQYVVYQLI 119
Query: 125 KALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDA----------------- 167
K + YLH G +HRD+K NIL+++ +K+ADFG+S +
Sbjct: 120 KVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTEN 179
Query: 168 -GDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
D Q +V T + APE++ Y D+WS G E+ G F
Sbjct: 180 FDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIF 231
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 101/224 (45%), Gaps = 10/224 (4%)
Query: 12 DAKDYRLYEEVGEGVSATVYRALCIPLN----EIVAIKVLDLEKCNNDLDGIRREVQTMR 67
+ + + +++G+G +V PL E+VA+K L L RE++ ++
Sbjct: 9 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILK 67
Query: 68 VTNHPNVLRAH--CSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
H N+++ C L ++M Y+ GS ++ + E + + + K
Sbjct: 68 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICK 126
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
+ YL +IHR++ NIL+++ +K+ DFG++ + + + + W A
Sbjct: 127 GMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYA 186
Query: 186 PEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLM 229
PE + + + +D+WSFG+ EL + SK PP + + M
Sbjct: 187 PESLTE-SKFSVASDVWSFGVVLYEL-FTYIEKSKSPPAEFMRM 228
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 92/213 (43%), Gaps = 19/213 (8%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR--REVQTMRVTNH 71
K Y+ + +G G V A L VAIK L N R RE+ M+V NH
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKVVNH 82
Query: 72 PNVLRAHCSFTTGHCL------WVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
N++ FT L ++VM M + + ++ LL + L
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-----LSQVIQMELDHERMSYLLYQMLC 137
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
+ +LH G IHRD+K NI++ S+ +K+ DFG++ AG +V T + A
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART---AGT-SFMMTPYVVTRYYRA 193
Query: 186 PEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
PEV+ + GY DIWS G E+ G F
Sbjct: 194 PEVILGM-GYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 118/280 (42%), Gaps = 20/280 (7%)
Query: 2 DLVVEKRFPVDAKDYRLYEEVGEGVSATVYRALCIPL-----NEIVAIKVLDLEKCNNDL 56
D+ V + V + + E+G+G VY + + VAIK ++ +
Sbjct: 3 DVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER 62
Query: 57 DGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVI 116
E M+ N +V+R + G V+M M G ++S P PV+
Sbjct: 63 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVL 122
Query: 117 A--------TLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAG 168
A + E + YL+ + +HRD+ A N ++ + +K+ DFG++ +++
Sbjct: 123 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET- 181
Query: 169 DRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAH-GHAPFSKYPPMKVL 227
D R + WM+PE ++ + +D+WSFG+ E+A P+ +VL
Sbjct: 182 DYYRKGGKGLLPVRWMSPESLKD-GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL 240
Query: 228 LMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPT 267
++ GL + D F EL+ C +PK RP+
Sbjct: 241 RFVMEG---GLLDKPDNCPDMLF-ELMRMCWQYNPKMRPS 276
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 90/203 (44%), Gaps = 11/203 (5%)
Query: 22 VGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAHCSF 81
+G G VY+ + +VA+K L E+ + EV+ + + H N+LR
Sbjct: 46 LGRGGFGKVYKGR-LADGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFC 104
Query: 82 TTGHCLWVVMPYMAGGS---CLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGH--- 135
T +V PYMA GS CL + P + P + + + L YLH H
Sbjct: 105 MTPTERLLVYPYMANGSVASCLRERPESQPP-LDWPKRQRIALGSARGLAYLHDHCDPKI 163
Query: 136 IHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLHGY 195
IHRDVKA NIL+D + DFG++ M D D GT +APE +
Sbjct: 164 IHRDVKAANILLDEEFEAVVGDFGLAKLM-DYKDXH-VXXAVRGTIGHIAPEYLSTGKSS 221
Query: 196 DFKADIWSFGITALELAHGHAPF 218
+ K D++ +G+ LEL G F
Sbjct: 222 E-KTDVFGYGVMLLELITGQRAF 243
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 106/223 (47%), Gaps = 24/223 (10%)
Query: 16 YRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVL 75
+ L + +G+G +A V+R ++ AIKV + +D RE + ++ NH N++
Sbjct: 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIV 70
Query: 76 RAHC---SFTTGHCLWVVMPYMAGGSCLHIMK---SAYPEGFEEPVIATLLRETLKALVY 129
+ TT H + ++M + GS +++ +AY G E +LR+ + + +
Sbjct: 71 KLFAIEEETTTRHKV-LIMEFCPCGSLYTVLEEPSNAY--GLPESEFLIVLRDVVGGMNH 127
Query: 130 LHFHGHIHRDVKAGNILI----DSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
L +G +HR++K GNI+ D KL DFG + + D D Q + GT ++
Sbjct: 128 LRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED--DEQFV--SLYGTEEYLH 183
Query: 186 PE-----VMQQLH--GYDFKADIWSFGITALELAHGHAPFSKY 221
P+ V+++ H Y D+WS G+T A G PF +
Sbjct: 184 PDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPF 226
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 124/283 (43%), Gaps = 27/283 (9%)
Query: 11 VDAKDYRLYEEVGEGVSATVYRALCIPLNE-----IVAIKVLDLEKCNNDLDGIRREVQT 65
+ +D L E+GEG V+ A C L+ +VA+K L D +RE +
Sbjct: 12 IKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKD-FQREAEL 70
Query: 66 MRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGF-----------EEP 114
+ H ++++ + G L +V YM G +++ P+ E
Sbjct: 71 LTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGEL 130
Query: 115 VIATLLR---ETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQ 171
++ +L + +VYL +HRD+ N L+ +N +K+ DFG+S ++ +
Sbjct: 131 GLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYR 190
Query: 172 RSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMT 230
+T + WM PE + + ++D+WSFG+ E+ +G P+ + +V+
Sbjct: 191 VGGHTMLPIR-WMPPESI-MYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECI 248
Query: 231 LQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMK 273
Q G ER + K +++ C ++P++R +++ K
Sbjct: 249 TQ----GRVLERPRVCPKEVYDVMLGCWQREPQQRLNIKEIYK 287
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 105/223 (47%), Gaps = 24/223 (10%)
Query: 16 YRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVL 75
+ L + +G+G +A V+R ++ AIKV + +D RE + ++ NH N++
Sbjct: 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIV 70
Query: 76 RAHC---SFTTGHCLWVVMPYMAGGSCLHIMK---SAYPEGFEEPVIATLLRETLKALVY 129
+ TT H + ++M + GS +++ +AY G E +LR+ + + +
Sbjct: 71 KLFAIEEETTTRHKV-LIMEFCPCGSLYTVLEEPSNAY--GLPESEFLIVLRDVVGGMNH 127
Query: 130 LHFHGHIHRDVKAGNILI----DSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
L +G +HR++K GNI+ D KL DFG + + D D Q GT ++
Sbjct: 128 LRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED--DEQFV--XLYGTEEYLH 183
Query: 186 PE-----VMQQLH--GYDFKADIWSFGITALELAHGHAPFSKY 221
P+ V+++ H Y D+WS G+T A G PF +
Sbjct: 184 PDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPF 226
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 90/206 (43%), Gaps = 21/206 (10%)
Query: 22 VGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNH---PNVLRAH 78
VG G +V A L + VA+K L + L RR + +R+ H NV+
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVK--KLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 79 CSFTTGHCL------WVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHF 132
FT + ++V M G +I+K + + + L+ + L+ L Y+H
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLM-GADLNNIVKC---QALSDEHVQFLVYQLLRGLKYIHS 149
Query: 133 HGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQL 192
G IHRD+K N+ ++ + +++ DFG+ A +V T + APE+M
Sbjct: 150 AGIIHRDLKPSNVAVNEDSELRILDFGL------ARQADEEMTGYVATRWYRAPEIMLNW 203
Query: 193 HGYDFKADIWSFGITALELAHGHAPF 218
Y+ DIWS G EL G A F
Sbjct: 204 MHYNQTVDIWSVGCIMAELLQGKALF 229
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 120/274 (43%), Gaps = 26/274 (9%)
Query: 11 VDAKDYRLYEEVGEGVSATVYRALC---IPLNE--IVAIKVLDLEKCNNDLDGIRREVQT 65
+ +D L E+GEG V+ A C +P + +VA+K L E + +RE +
Sbjct: 9 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALK-EASESARQDFQREAEL 67
Query: 66 MRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPE-----GFEE----PV- 115
+ + H +++R T G L +V YM G ++S P+ G E+ P+
Sbjct: 68 LTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLG 127
Query: 116 ---IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQR 172
+ + + +VYL +HRD+ N L+ +K+ DFG+S ++ D R
Sbjct: 128 LGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYST-DYYR 186
Query: 173 SRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTL 231
+ WM PE + + ++D+WSFG+ E+ +G P+ + + +
Sbjct: 187 VGGRTMLPIRWMPPESI-LYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCIT 245
Query: 232 QNAPPGLDYERDKRFSKSFKELVTACLVKDPKKR 265
Q G + ER + ++ C ++P++R
Sbjct: 246 Q----GRELERPRACPPEVYAIMRGCWQREPQQR 275
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 97/230 (42%), Gaps = 13/230 (5%)
Query: 42 VAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLH 101
VAIK L E M +HPNV+ T + ++ +M GS
Sbjct: 38 VAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDS 97
Query: 102 IMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVS 161
++ + F + +LR + YL ++HR + A NIL++SN K++DFG+S
Sbjct: 98 FLRQNDGQ-FTVIQLVGMLRGIAAGMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLS 156
Query: 162 ACMFDAGDRQRSRNTFVG-TPC-WMAPEVMQQLHGYDFKADIWSFGITALE-LAHGHAPF 218
+ D + G P W APE + Q + +D+WS+GI E +++G P+
Sbjct: 157 RFLEDDTSDPTYTSALGGKIPIRWTAPEAI-QYRKFTSASDVWSYGIVMWEVMSYGERPY 215
Query: 219 SKYPPMKVLLMTLQN--APPGLDYERDKRFSKSFKELVTACLVKDPKKRP 266
V+ Q+ PP +D + +L+ C KD RP
Sbjct: 216 WDMTNQDVINAIEQDYRLPPPMD------CPSALHQLMLDCWQKDRNHRP 259
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 118/274 (43%), Gaps = 26/274 (9%)
Query: 11 VDAKDYRLYEEVGEGVSATVYRALCIPL-----NEIVAIKVLDLEKCNNDLDGIRREVQT 65
+ +D L E+GEG V+ A C L +VA+K L E + +RE +
Sbjct: 15 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALK-EASESARQDFQREAEL 73
Query: 66 MRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPE-----GFEE----PV- 115
+ + H +++R T G L +V YM G ++S P+ G E+ P+
Sbjct: 74 LTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLG 133
Query: 116 ---IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQR 172
+ + + +VYL +HRD+ N L+ +K+ DFG+S ++ D R
Sbjct: 134 LGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYST-DYYR 192
Query: 173 SRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTL 231
+ WM PE + + ++D+WSFG+ E+ +G P+ + + +
Sbjct: 193 VGGRTMLPIRWMPPESI-LYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCIT 251
Query: 232 QNAPPGLDYERDKRFSKSFKELVTACLVKDPKKR 265
Q G + ER + ++ C ++P++R
Sbjct: 252 Q----GRELERPRACPPEVYAIMRGCWQREPQQR 281
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 121/272 (44%), Gaps = 29/272 (10%)
Query: 21 EVGEGVSATVYRALC----IPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLR 76
++GEG VY+ + + ++ A+ + E+ D +E++ M H N++
Sbjct: 38 KMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFD---QEIKVMAKCQHENLVE 94
Query: 77 AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETL-----KALVYLH 131
+ G L +V YM GS L + +G P ++ +R + + +LH
Sbjct: 95 LLGFSSDGDDLCLVYVYMPNGSLLDRLSCL--DG--TPPLSWHMRCKIAQGAANGINFLH 150
Query: 132 FHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQ 191
+ HIHRD+K+ NIL+D K++DFG++ + + VGT +MAPE ++
Sbjct: 151 ENHHIHRDIKSANILLDEAFTAKISDFGLARAS-EKFAQTVMXXRIVGTTAYMAPEALRG 209
Query: 192 LHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLL----MTLQNAPPGLDY------E 241
K+DI+SFG+ LE+ G ++ ++LL DY +
Sbjct: 210 --EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMND 267
Query: 242 RDKRFSKSFKELVTACLVKDPKKRPTAEKLMK 273
D ++ + + CL + KRP +K+ +
Sbjct: 268 ADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQ 299
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 126/308 (40%), Gaps = 42/308 (13%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR--REVQTMRVTNH 71
K Y+ + +G G V A L+ VAIK L N R RE+ M+ NH
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKXVNH 82
Query: 72 PNVLRAHCSFTTGHCL------WVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
N++ FT L ++VM M + + ++ LL + L
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-----LXQVIQMELDHERMSYLLYQMLX 137
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
+ +LH G IHRD+K NI++ S+ +K+ DFG++ AG +V T + A
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART---AGT-SFMMTPYVVTRYYRA 193
Query: 186 PEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKR 245
PEV+ + GY DIWS G E+ F PG DY +
Sbjct: 194 PEVILGM-GYKENVDIWSVGCIMGEMVRHKILF-----------------PGRDY--IDQ 233
Query: 246 FSKSFKELVTACLVKDPKKRPTAEKLMKHHFFKHARSNDFLARSIVDNLAPLGERFRMLK 305
++K ++L T C K +PT +++ + + + D+L P LK
Sbjct: 234 WNKVIEQLGTPCPEFMKKLQPTVRNYVEN---RPKYAGLTFPKLFPDSLFPADSEHNKLK 290
Query: 306 AKEA-DLL 312
A +A DLL
Sbjct: 291 ASQARDLL 298
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 126/308 (40%), Gaps = 42/308 (13%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR--REVQTMRVTNH 71
K Y+ + +G G V A L+ VAIK L N R RE+ M+ NH
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNH 82
Query: 72 PNVLRAHCSFTTGHCL------WVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
N++ FT L ++VM M + + ++ LL + L
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-----LXQVIQMELDHERMSYLLYQMLX 137
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
+ +LH G IHRD+K NI++ S+ +K+ DFG++ AG +V T + A
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART---AGT-SFMMTPYVVTRYYRA 193
Query: 186 PEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKR 245
PEV+ + GY DIWS G E+ F PG DY +
Sbjct: 194 PEVILGM-GYKENVDIWSVGCIMGEMVRHKILF-----------------PGRDY--IDQ 233
Query: 246 FSKSFKELVTACLVKDPKKRPTAEKLMKHHFFKHARSNDFLARSIVDNLAPLGERFRMLK 305
++K ++L T C K +PT +++ + + + D+L P LK
Sbjct: 234 WNKVIEQLGTPCPEFMKKLQPTVRNYVEN---RPKYAGLTFPKLFPDSLFPADSEHNKLK 290
Query: 306 AKEA-DLL 312
A +A DLL
Sbjct: 291 ASQARDLL 298
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 23/208 (11%)
Query: 22 VGEGVSATVYRALCIPLNEIVAIK-VLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAHCS 80
+G G VY+A E+VAIK VL ++ N RE+Q MR +H N++R
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNIVRLRYF 115
Query: 81 FTTGH------CLWVVMPYMAGGSCLHIMKSAYPEGFEE-PVIATLLR--ETLKALVYLH 131
F + L +V+ Y+ ++ + Y + PVI L + ++L Y+H
Sbjct: 116 FYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 173
Query: 132 FHGHIHRDVKAGNILIDSNGAI-KLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
G HRD+K N+L+D + A+ KL DFG + + R +++ + + APE++
Sbjct: 174 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV----RGEPNVSYICSRYYRAPELIF 229
Query: 191 QLHGYDFKADIWSFGITALELAHGHAPF 218
Y D+WS G EL G F
Sbjct: 230 GATDYTSSIDVWSAGCVLAELLLGQPIF 257
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 82/172 (47%), Gaps = 14/172 (8%)
Query: 66 MRVTNHPNVLR--AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLL--- 120
M+ +HPNVL C + G L VV+PYM G + +++ P + L+
Sbjct: 84 MKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNET----HNPTVKDLIGFG 138
Query: 121 RETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGT 180
+ K + YL +HRD+ A N ++D +K+ADFG++ M+D T
Sbjct: 139 LQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKL 198
Query: 181 PC-WMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTL 231
P WMA E +Q + K+D+WSFG+ EL AP YP + +T+
Sbjct: 199 PVKWMALESLQT-QKFTTKSDVWSFGVLLWELMTRGAP--PYPDVNTFDITV 247
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 121/272 (44%), Gaps = 29/272 (10%)
Query: 21 EVGEGVSATVYRALC----IPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLR 76
++GEG VY+ + + ++ A+ + E+ D +E++ M H N++
Sbjct: 32 KMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFD---QEIKVMAKCQHENLVE 88
Query: 77 AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETL-----KALVYLH 131
+ G L +V YM GS L + +G P ++ +R + + +LH
Sbjct: 89 LLGFSSDGDDLCLVYVYMPNGSLLDRLSCL--DG--TPPLSWHMRCKIAQGAANGINFLH 144
Query: 132 FHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQ 191
+ HIHRD+K+ NIL+D K++DFG++ + + VGT +MAPE ++
Sbjct: 145 ENHHIHRDIKSANILLDEAFTAKISDFGLARAS-EKFAQXVMXXRIVGTTAYMAPEALRG 203
Query: 192 LHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLL----MTLQNAPPGLDY------E 241
K+DI+SFG+ LE+ G ++ ++LL DY +
Sbjct: 204 --EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMND 261
Query: 242 RDKRFSKSFKELVTACLVKDPKKRPTAEKLMK 273
D ++ + + CL + KRP +K+ +
Sbjct: 262 ADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQ 293
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 134/334 (40%), Gaps = 43/334 (12%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR--REVQTMRVTNH 71
K Y+ + +G G V A L VAIK L N R RE+ M+ NH
Sbjct: 29 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNH 87
Query: 72 PNVLRAHCSFTTGHCL------WVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
N++ FT L ++VM M C I + ++ LL + L
Sbjct: 88 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----LDHERMSYLLYQMLC 142
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
+ +LH G IHRD+K NI++ S+ +K+ DFG++ +V T + A
Sbjct: 143 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMTPYVVTRYYRA 198
Query: 186 PEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKR 245
PEV+ + GY D+WS G E+ F PG DY +
Sbjct: 199 PEVILGM-GYKENVDLWSVGCIMGEMVCHKILF-----------------PGRDY--IDQ 238
Query: 246 FSKSFKELVTACLVKDPKKRPTAEKLMKHHFFKHARSNDFLARSIVDNLAPLGERFRMLK 305
++K ++L T C K +PT +++ + + + D L P LK
Sbjct: 239 WNKVIEQLGTPCPEFMKKLQPTVRTYVEN---RPKYAGYSFEKLFPDVLFPADSEHNKLK 295
Query: 306 AKEADLLVQNKALYEDKEQLSQQEYIRG--ISAW 337
A +A L+ + + +++S E ++ I+ W
Sbjct: 296 ASQARDLLSKMLVIDASKRISVDEALQHPYINVW 329
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 90/206 (43%), Gaps = 21/206 (10%)
Query: 22 VGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNH---PNVLRAH 78
VG G +V A L + VA+K L + L RR + +R+ H NV+
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVK--KLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 85
Query: 79 CSFTTGHCL------WVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHF 132
FT + ++V M G +I+K + + + L+ + L+ L Y+H
Sbjct: 86 DVFTPATSIEDFSEVYLVTTLM-GADLNNIVKC---QALSDEHVQFLVYQLLRGLKYIHS 141
Query: 133 HGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQL 192
G IHRD+K N+ ++ + +++ DFG+ A +V T + APE+M
Sbjct: 142 AGIIHRDLKPSNVAVNEDCELRILDFGL------ARQADEEMTGYVATRWYRAPEIMLNW 195
Query: 193 HGYDFKADIWSFGITALELAHGHAPF 218
Y+ DIWS G EL G A F
Sbjct: 196 MHYNQTVDIWSVGCIMAELLQGKALF 221
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 23/208 (11%)
Query: 22 VGEGVSATVYRALCIPLNEIVAIK-VLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAHCS 80
+G G VY+A E+VAIK VL ++ N RE+Q MR +H N++R
Sbjct: 64 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNIVRLRYF 117
Query: 81 FTTGH------CLWVVMPYMAGGSCLHIMKSAYPEGFEE-PVIATLLR--ETLKALVYLH 131
F + L +V+ Y+ ++ + Y + PVI L + ++L Y+H
Sbjct: 118 FYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 175
Query: 132 FHGHIHRDVKAGNILIDSNGAI-KLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
G HRD+K N+L+D + A+ KL DFG + + R +++ + + APE++
Sbjct: 176 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV----RGEPNVSYICSRYYRAPELIF 231
Query: 191 QLHGYDFKADIWSFGITALELAHGHAPF 218
Y D+WS G EL G F
Sbjct: 232 GATDYTSSIDVWSAGCVLAELLLGQPIF 259
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 120/299 (40%), Gaps = 51/299 (17%)
Query: 4 VVEKRFPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREV 63
V+KRF +D K+ L +G G V++A + I+ + K NN+ REV
Sbjct: 5 TVDKRFGMDFKEIEL---IGSGGFGQVFKAKHRIDGKTYVIRRV---KYNNE--KAEREV 56
Query: 64 QTMRVTNHPNVLR-----------------------------AHCSFTTGHCLWVVMPYM 94
+ + +H N++ + S + CL++ M +
Sbjct: 57 KALAKLDHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFC 116
Query: 95 AGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIK 154
G+ ++ E ++ + L + K + Y+H IHRD+K NI + +K
Sbjct: 117 DKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVK 176
Query: 155 LADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHG 214
+ DFG+ + + G R RS+ GT +M+PE + Y + D+++ G+ EL H
Sbjct: 177 IGDFGLVTSLKNDGKRTRSK----GTLRYMSPEQISS-QDYGKEVDLYALGLILAELLH- 230
Query: 215 HAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMK 273
+ + K + F K K L+ L K P+ RP ++++
Sbjct: 231 -VCDTAFETSKFFTDLRDGIISDI-------FDKKEKTLLQKLLSKKPEDRPNTSEILR 281
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 110/261 (42%), Gaps = 20/261 (7%)
Query: 21 EVGEGVSATVYRALCIPL-----NEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVL 75
E+G+G VY + + VAIK ++ + E M+ N +V+
Sbjct: 17 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 76
Query: 76 RAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIA--------TLLRETLKAL 127
R + G V+M M G ++S PE PV+A + E +
Sbjct: 77 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 136
Query: 128 VYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPE 187
YL+ + +HRD+ A N ++ + +K+ DFG++ + + D R + WM+PE
Sbjct: 137 AYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXET-DXXRKGGKGLLPVRWMSPE 195
Query: 188 VMQQLHGYDFKADIWSFGITALELAH-GHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRF 246
++ + +D+WSFG+ E+A P+ +VL ++ GL ++
Sbjct: 196 SLKD-GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG---GL-LDKPDNC 250
Query: 247 SKSFKELVTACLVKDPKKRPT 267
EL+ C +PK RP+
Sbjct: 251 PDMLLELMRMCWQYNPKMRPS 271
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 23/208 (11%)
Query: 22 VGEGVSATVYRALCIPLNEIVAIK-VLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAHCS 80
+G G VY+A E+VAIK VL ++ N RE+Q MR +H N++R
Sbjct: 56 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNIVRLRYF 109
Query: 81 FTTGH------CLWVVMPYMAGGSCLHIMKSAYPEGFEE-PVIATLLR--ETLKALVYLH 131
F + L +V+ Y+ ++ + Y + PVI L + ++L Y+H
Sbjct: 110 FYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 167
Query: 132 FHGHIHRDVKAGNILIDSNGAI-KLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
G HRD+K N+L+D + A+ KL DFG + + R +++ + + APE++
Sbjct: 168 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV----RGEPNVSYICSRYYRAPELIF 223
Query: 191 QLHGYDFKADIWSFGITALELAHGHAPF 218
Y D+WS G EL G F
Sbjct: 224 GATDYTSSIDVWSAGCVLAELLLGQPIF 251
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 23/208 (11%)
Query: 22 VGEGVSATVYRALCIPLNEIVAIK-VLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAHCS 80
+G G VY+A E+VAIK VL ++ N RE+Q MR +H N++R
Sbjct: 66 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNIVRLRYF 119
Query: 81 FTTGH------CLWVVMPYMAGGSCLHIMKSAYPEGFEE-PVIATLLR--ETLKALVYLH 131
F + L +V+ Y+ ++ + Y + PVI L + ++L Y+H
Sbjct: 120 FYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 177
Query: 132 FHGHIHRDVKAGNILIDSNGAI-KLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
G HRD+K N+L+D + A+ KL DFG + + R +++ + + APE++
Sbjct: 178 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV----RGEPNVSYICSRYYRAPELIF 233
Query: 191 QLHGYDFKADIWSFGITALELAHGHAPF 218
Y D+WS G EL G F
Sbjct: 234 GATDYTSSIDVWSAGCVLAELLLGQPIF 261
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 110/261 (42%), Gaps = 20/261 (7%)
Query: 21 EVGEGVSATVYRALCIPL-----NEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVL 75
E+G+G VY + + VAIK ++ + E M+ N +V+
Sbjct: 19 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 78
Query: 76 RAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIA--------TLLRETLKAL 127
R + G V+M M G ++S PE PV+A + E +
Sbjct: 79 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 128 VYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPE 187
YL+ + +HRD+ A N + + +K+ DFG++ +++ D R + WM+PE
Sbjct: 139 AYLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYET-DYYRKGGKGLLPVRWMSPE 197
Query: 188 VMQQLHGYDFKADIWSFGITALELAH-GHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRF 246
++ + +D+WSFG+ E+A P+ +VL ++ GL ++
Sbjct: 198 SLKD-GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG---GL-LDKPDNC 252
Query: 247 SKSFKELVTACLVKDPKKRPT 267
EL+ C +PK RP+
Sbjct: 253 PDMLLELMRMCWQYNPKMRPS 273
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 126/308 (40%), Gaps = 42/308 (13%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR--REVQTMRVTNH 71
K Y+ + +G G V A L+ VAIK L N R RE+ M+ NH
Sbjct: 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNH 75
Query: 72 PNVLRAHCSFTTGHCL------WVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
N++ FT L ++VM M + + ++ LL + L
Sbjct: 76 KNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-----LXQVIQMELDHERMSYLLYQMLX 130
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
+ +LH G IHRD+K NI++ S+ +K+ DFG++ AG +V T + A
Sbjct: 131 GIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART---AGT-SFMMTPYVVTRYYRA 186
Query: 186 PEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKR 245
PEV+ + GY DIWS G E+ F PG DY +
Sbjct: 187 PEVILGM-GYKENVDIWSVGCIMGEMVRHKILF-----------------PGRDY--IDQ 226
Query: 246 FSKSFKELVTACLVKDPKKRPTAEKLMKHHFFKHARSNDFLARSIVDNLAPLGERFRMLK 305
++K ++L T C K +PT +++ + + + D+L P LK
Sbjct: 227 WNKVIEQLGTPCPEFMKKLQPTVRNYVEN---RPKYAGLTFPKLFPDSLFPADSEHNKLK 283
Query: 306 AKEA-DLL 312
A +A DLL
Sbjct: 284 ASQARDLL 291
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 97/209 (46%), Gaps = 19/209 (9%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMR-VTNHPN 73
DY+L ++G G + V+ A+ I NE V +K+L K N I+RE++ + + PN
Sbjct: 38 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKNK----IKREIKILENLRGGPN 93
Query: 74 VLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPV---IATLLRETLKALVYL 130
++ T + + H+ + + + ++ I + E LKAL Y
Sbjct: 94 II------TLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYC 147
Query: 131 HFHGHIHRDVKAGNILID-SNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVM 189
H G +HRDVK N++ID + ++L D+G+ A + G + N V + + PE++
Sbjct: 148 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGL-AEFYHPG---QEYNVRVASRYFKGPELL 203
Query: 190 QQLHGYDFKADIWSFGITALELAHGHAPF 218
YD+ D+WS G + PF
Sbjct: 204 VDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 23/208 (11%)
Query: 22 VGEGVSATVYRALCIPLNEIVAIK-VLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAHCS 80
+G G VY+A E+VAIK VL ++ N RE+Q MR +H N++R
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNIVRLRYF 160
Query: 81 FTTGH------CLWVVMPYMAGGSCLHIMKSAYPEGFEE-PVIATLLR--ETLKALVYLH 131
F + L +V+ Y+ ++ + Y + PVI L + ++L Y+H
Sbjct: 161 FYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 218
Query: 132 FHGHIHRDVKAGNILIDSNGAI-KLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
G HRD+K N+L+D + A+ KL DFG + + R +++ + + APE++
Sbjct: 219 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV----RGEPNVSYICSRYYRAPELIF 274
Query: 191 QLHGYDFKADIWSFGITALELAHGHAPF 218
Y D+WS G EL G F
Sbjct: 275 GATDYTSSIDVWSAGCVLAELLLGQPIF 302
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 135/334 (40%), Gaps = 43/334 (12%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR--REVQTMRVTNH 71
K Y+ + +G G V A L VAIK L N R RE+ M+ NH
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNH 82
Query: 72 PNVLRAHCSFTTGHCL------WVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
N++ FT L ++VM M C I + ++ LL + L
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----LDHERMSYLLYQMLC 137
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
+ +LH G IHRD+K NI++ S+ +K+ DFG++ AG V T + A
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMMEPEVV-TRYYRA 193
Query: 186 PEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKR 245
PEV+ + GY DIWS G E+ F PG DY +
Sbjct: 194 PEVILGM-GYKENVDIWSVGCIMGEMVCHKILF-----------------PGRDY--IDQ 233
Query: 246 FSKSFKELVTACLVKDPKKRPTAEKLMKHHFFKHARSNDFLARSIVDNLAPLGERFRMLK 305
++K ++L T C K +PT +++ + + + D L P LK
Sbjct: 234 WNKVIEQLGTPCPAFMKKLQPTVRNYVEN---RPKYAGYSFEKLFPDVLFPADSEHNKLK 290
Query: 306 AKEADLLVQNKALYEDKEQLSQQEYIRG--ISAW 337
A +A L+ + + +++S E ++ I+ W
Sbjct: 291 ASQARDLLSKMLVIDASKRISVDEALQHPYINVW 324
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 119/271 (43%), Gaps = 48/271 (17%)
Query: 42 VAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYM------- 94
VA+K + ++ C+ L I+ ++ +HPNV+R +CS TT L++ +
Sbjct: 42 VAVKRMLIDFCDIALMEIKLLTES---DDHPNVIRYYCSETTDRFLYIALELCNLNLQDL 98
Query: 95 -----AGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDS 149
L + K P +LLR+ + +LH IHRD+K NIL+ +
Sbjct: 99 VESKNVSDENLKLQKEYNP--------ISLLRQIASGVAHLHSLKIIHRDLKPQNILVST 150
Query: 150 -------------NGAIKLADFGVSACMFDAGDR--QRSRNTFVGTPCWMAPEVMQQLHG 194
N I ++DFG+ + D+G + + N GT W APE++++ +
Sbjct: 151 SSRFTADQQTGAENLRILISDFGLCKKL-DSGQSSFRTNLNNPSGTSGWRAPELLEESNN 209
Query: 195 YDFK------ADIWSFG-ITALELAHGHAPF-SKYPPMKVLLMTLQNAPPGLDYERDKRF 246
K DI+S G + L+ G PF KY ++ + + + D+
Sbjct: 210 LQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDE-MKCLHDRSL 268
Query: 247 SKSFKELVTACLVKDPKKRPTAEKLMKHHFF 277
+L++ + DP KRPTA K+++H F
Sbjct: 269 IAEATDLISQMIDHDPLKRPTAMKVLRHPLF 299
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 102/255 (40%), Gaps = 40/255 (15%)
Query: 61 REVQTMRVTNHPNVLRAHCSFTTGHCL-----WVVMPYMAGGSCLHIMKSAYPEGFEEPV 115
RE++ ++ H NV+ FT L ++ ++ G +I+K + +
Sbjct: 99 RELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDH 155
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
+ L+ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ D
Sbjct: 156 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------EMT 209
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVL--LMTLQN 233
+V T + APE+M Y+ DIWS G EL G F + L +M L
Sbjct: 210 GYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTG 269
Query: 234 APPGLDYER-----------------DKRFSKSF-------KELVTACLVKDPKKRPTAE 269
PP R + F+ F +L+ LV D KR TA
Sbjct: 270 TPPASVISRMPSHEARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITAS 329
Query: 270 KLMKHHFFKHARSND 284
+ + H +F D
Sbjct: 330 EALAHPYFSQYHDPD 344
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 134/334 (40%), Gaps = 43/334 (12%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR--REVQTMRVTNH 71
K Y+ + +G G V A L VAIK L N R RE+ M+ NH
Sbjct: 18 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNH 76
Query: 72 PNVLRAHCSFTTGHCL------WVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
N++ FT L ++VM M C I + ++ LL + L
Sbjct: 77 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----LDHERMSYLLYQMLC 131
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
+ +LH G IHRD+K NI++ S+ +K+ DFG++ +V T + A
Sbjct: 132 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMTPYVVTRYYRA 187
Query: 186 PEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKR 245
PEV+ + GY D+WS G E+ F PG DY +
Sbjct: 188 PEVILGM-GYKENVDLWSVGCIMGEMVCHKILF-----------------PGRDY--IDQ 227
Query: 246 FSKSFKELVTACLVKDPKKRPTAEKLMKHHFFKHARSNDFLARSIVDNLAPLGERFRMLK 305
++K ++L T C K +PT +++ + + + D L P LK
Sbjct: 228 WNKVIEQLGTPCPEFMKKLQPTVRTYVEN---RPKYAGYSFEKLFPDVLFPADSEHNKLK 284
Query: 306 AKEADLLVQNKALYEDKEQLSQQEYIRG--ISAW 337
A +A L+ + + +++S E ++ I+ W
Sbjct: 285 ASQARDLLSKMLVIDASKRISVDEALQHPYINVW 318
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 25/211 (11%)
Query: 22 VGEGVSATVYRALC--------IPLNEIVAIKVLD---LEKCNNDLDGIRREVQTMRVTN 70
+G G VY+ + +P VAIK L EK D G E M +
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVP----VAIKTLKAGYTEKQRVDFLG---EAGIMGQFS 104
Query: 71 HPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYL 130
H N++R + + ++ YM G+ ++ E F + +LR + YL
Sbjct: 105 HHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGE-FSVLQLVGMLRGIAAGMKYL 163
Query: 131 HFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVG-TPC-WMAPEV 188
++HRD+ A NIL++SN K++DFG+S + D D + + T G P W APE
Sbjct: 164 ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLED--DPEATYTTSGGKIPIRWTAPEA 221
Query: 189 MQQLHGYDFKADIWSFGITALE-LAHGHAPF 218
+ + +D+WSFGI E + +G P+
Sbjct: 222 I-SYRKFTSASDVWSFGIVMWEVMTYGERPY 251
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 119/271 (43%), Gaps = 48/271 (17%)
Query: 42 VAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYM------- 94
VA+K + ++ C+ L I+ ++ +HPNV+R +CS TT L++ +
Sbjct: 42 VAVKRMLIDFCDIALMEIKLLTES---DDHPNVIRYYCSETTDRFLYIALELCNLNLQDL 98
Query: 95 -----AGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDS 149
L + K P +LLR+ + +LH IHRD+K NIL+ +
Sbjct: 99 VESKNVSDENLKLQKEYNP--------ISLLRQIASGVAHLHSLKIIHRDLKPQNILVST 150
Query: 150 -------------NGAIKLADFGVSACMFDAGDR--QRSRNTFVGTPCWMAPEVMQQLHG 194
N I ++DFG+ + D+G + + N GT W APE++++ +
Sbjct: 151 SSRFTADQQTGAENLRILISDFGLCKKL-DSGQXXFRXNLNNPSGTSGWRAPELLEESNN 209
Query: 195 YDFK------ADIWSFG-ITALELAHGHAPF-SKYPPMKVLLMTLQNAPPGLDYERDKRF 246
K DI+S G + L+ G PF KY ++ + + + D+
Sbjct: 210 LQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDE-MKCLHDRSL 268
Query: 247 SKSFKELVTACLVKDPKKRPTAEKLMKHHFF 277
+L++ + DP KRPTA K+++H F
Sbjct: 269 IAEATDLISQMIDHDPLKRPTAMKVLRHPLF 299
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 82/172 (47%), Gaps = 14/172 (8%)
Query: 66 MRVTNHPNVLR--AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLL--- 120
M+ +HPNVL C + G L VV+PYM G + +++ P + L+
Sbjct: 85 MKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNET----HNPTVKDLIGFG 139
Query: 121 RETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGT 180
+ K + YL +HRD+ A N ++D +K+ADFG++ M+D T
Sbjct: 140 LQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL 199
Query: 181 PC-WMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTL 231
P WMA E +Q + K+D+WSFG+ EL AP YP + +T+
Sbjct: 200 PVKWMALESLQT-QKFTTKSDVWSFGVLLWELMTRGAP--PYPDVNTFDITV 248
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 120/290 (41%), Gaps = 52/290 (17%)
Query: 3 LVVEKRFPVDAKDYRLYEEV-GEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRR 61
L ++K +D DY++ +V G G++ V + E A+K+L D RR
Sbjct: 8 LQIKKNAIID--DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML------QDCPKARR 59
Query: 62 EVQT-MRVTNHPNVLR---AHCSFTTGH-CLWVVMPYMAGGSCLHIMKSAYPEGFEEPVI 116
EV+ R + P+++R + + G CL +VM + GG ++ + F E
Sbjct: 60 EVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREA 119
Query: 117 ATLLRETLKALVYLHFHGHIHRDVKAGNILIDS---NGAIKLADFGVSACMFDAGDRQRS 173
+ +++ +A+ YLH HRDVK N+L S N +KL DFG + G++
Sbjct: 120 SEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTGEK--- 174
Query: 174 RNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF------SKYPPMKVL 227
YD D+WS G+ L G+ PF + P MK
Sbjct: 175 ---------------------YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 213
Query: 228 LMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFF 277
+ Q P ++ S+ K L+ L +P +R T + M H +
Sbjct: 214 IRMGQYEFPNPEWS---EVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 260
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 104/221 (47%), Gaps = 14/221 (6%)
Query: 4 VVEKRFPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDG-IRRE 62
V + ++ ++ +D L E++G G V+ N +VA+K E DL +E
Sbjct: 104 VPKDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCR-ETLPPDLKAKFLQE 162
Query: 63 VQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEG--FEEPVIATLL 120
+ ++ +HPN++R T +++VM + GG L +++ EG + ++
Sbjct: 163 ARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRT---EGARLRVKTLLQMV 219
Query: 121 RETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGT 180
+ + YL IHRD+ A N L+ +K++DFG+S +A +
Sbjct: 220 GDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSR--EEADGVXAASGGLRQV 277
Query: 181 PC-WMAPEVMQQLHG-YDFKADIWSFGITALE-LAHGHAPF 218
P W APE + +G Y ++D+WSFGI E + G +P+
Sbjct: 278 PVKWTAPEALN--YGRYSSESDVWSFGILLWETFSLGASPY 316
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 23/208 (11%)
Query: 22 VGEGVSATVYRALCIPLNEIVAIK-VLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAHCS 80
+G G VY+A E+VAIK VL ++ N RE+Q MR +H N++R
Sbjct: 33 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNIVRLRYF 86
Query: 81 FTTGH------CLWVVMPYMAGGSCLHIMKSAYPEGFEE-PVIATLLR--ETLKALVYLH 131
F + L +V+ Y+ ++ + Y + PVI L + ++L Y+H
Sbjct: 87 FYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 144
Query: 132 FHGHIHRDVKAGNILIDSNGAI-KLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
G HRD+K N+L+D + A+ KL DFG + + R +++ + + APE++
Sbjct: 145 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV----RGEPNVSYICSRYYRAPELIF 200
Query: 191 QLHGYDFKADIWSFGITALELAHGHAPF 218
Y D+WS G EL G F
Sbjct: 201 GATDYTSSIDVWSAGCVLAELLLGQPIF 228
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 23/208 (11%)
Query: 22 VGEGVSATVYRALCIPLNEIVAIK-VLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAHCS 80
+G G VY+A E+VAIK VL ++ N RE+Q MR +H N++R
Sbjct: 41 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNIVRLRYF 94
Query: 81 FTTGH------CLWVVMPYMAGGSCLHIMKSAYPEGFEE-PVIATLLR--ETLKALVYLH 131
F + L +V+ Y+ ++ + Y + PVI L + ++L Y+H
Sbjct: 95 FYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 152
Query: 132 FHGHIHRDVKAGNILIDSNGAI-KLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
G HRD+K N+L+D + A+ KL DFG + + R +++ + + APE++
Sbjct: 153 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV----RGEPNVSYICSRYYRAPELIF 208
Query: 191 QLHGYDFKADIWSFGITALELAHGHAPF 218
Y D+WS G EL G F
Sbjct: 209 GATDYTSSIDVWSAGCVLAELLLGQPIF 236
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 82/172 (47%), Gaps = 14/172 (8%)
Query: 66 MRVTNHPNVLR--AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLL--- 120
M+ +HPNVL C + G L VV+PYM G + +++ P + L+
Sbjct: 103 MKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNET----HNPTVKDLIGFG 157
Query: 121 RETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGT 180
+ K + YL +HRD+ A N ++D +K+ADFG++ M+D T
Sbjct: 158 LQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL 217
Query: 181 PC-WMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTL 231
P WMA E +Q + K+D+WSFG+ EL AP YP + +T+
Sbjct: 218 PVKWMALESLQT-QKFTTKSDVWSFGVLLWELMTRGAP--PYPDVNTFDITV 266
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 104/221 (47%), Gaps = 14/221 (6%)
Query: 4 VVEKRFPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDG-IRRE 62
V + ++ ++ +D L E++G G V+ N +VA+K E DL +E
Sbjct: 104 VPKDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCR-ETLPPDLKAKFLQE 162
Query: 63 VQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEG--FEEPVIATLL 120
+ ++ +HPN++R T +++VM + GG L +++ EG + ++
Sbjct: 163 ARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRT---EGARLRVKTLLQMV 219
Query: 121 RETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGT 180
+ + YL IHRD+ A N L+ +K++DFG+S +A +
Sbjct: 220 GDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSR--EEADGVYAASGGLRQV 277
Query: 181 PC-WMAPEVMQQLHG-YDFKADIWSFGITALE-LAHGHAPF 218
P W APE + +G Y ++D+WSFGI E + G +P+
Sbjct: 278 PVKWTAPEALN--YGRYSSESDVWSFGILLWETFSLGASPY 316
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 94/211 (44%), Gaps = 19/211 (9%)
Query: 22 VGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQ------TMRVTNHPNVL 75
+G G TVY+ + +P E V I V K N+ G + V+ M +HP+++
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAI--KILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 76 R--AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFH 133
R C T + +MP+ CL + + ++ + K ++YL
Sbjct: 81 RLLGVCLSPTIQLVTQLMPH----GCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEER 136
Query: 134 GHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPC-WMAPEVMQQL 192
+HRD+ A N+L+ S +K+ DFG++ + GD + P WMA E +
Sbjct: 137 RLVHRDLAARNVLVKSPNHVKITDFGLARLL--EGDEKEYNADGGKMPIKWMALECI-HY 193
Query: 193 HGYDFKADIWSFGITALEL-AHGHAPFSKYP 222
+ ++D+WS+G+T EL G P+ P
Sbjct: 194 RKFTHQSDVWSYGVTIWELMTFGGKPYDGIP 224
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 91/213 (42%), Gaps = 19/213 (8%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR--REVQTMRVTNH 71
K Y+ + +G G V A L VAIK L N R RE+ M+ NH
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNH 82
Query: 72 PNVLRAHCSFTTGHCL------WVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
N++ FT L ++VM M + + ++ LL + L
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-----LSQVIQMELDHERMSYLLYQMLC 137
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
+ +LH G IHRD+K NI++ S+ +K+ DFG++ AG +V T + A
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART---AGT-SFMMTPYVVTRYYRA 193
Query: 186 PEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
PEV+ + GY DIWS G E+ G F
Sbjct: 194 PEVILGM-GYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 101/231 (43%), Gaps = 17/231 (7%)
Query: 42 VAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLH 101
VAIK L + E M +HPN++ T + ++ YM GS
Sbjct: 45 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 104
Query: 102 IMKSAYPEG-FEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGV 160
++ +G F + +LR + YL ++HRD+ A NIL++SN K++DFG+
Sbjct: 105 FLRKN--DGRFTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGM 162
Query: 161 SACMFDAGDRQRSRNTFVG-TPC-WMAPEVMQQLHGYDFKADIWSFGITALE-LAHGHAP 217
S + D D + + T G P W APE + + +D+WS+GI E +++G P
Sbjct: 163 SRVLED--DPEAAYTTRGGKIPIRWTAPEAI-AYRKFTSASDVWSYGIVMWEVMSYGERP 219
Query: 218 FSKYPPMKVLLMTLQN--APPGLDYERDKRFSKSFKELVTACLVKDPKKRP 266
+ V+ + PP +D + +L+ C K+ RP
Sbjct: 220 YWDMSNQDVIKAIEEGYRLPPPMD------CPIALHQLMLDCWQKERSDRP 264
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 124/272 (45%), Gaps = 36/272 (13%)
Query: 23 GEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTM-RVTNHPNVLRAHCSF 81
G+ ++AT Y ++ VA+K+L + +++ + + E++ M ++ +H N++ +
Sbjct: 59 GKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGAC 118
Query: 82 TTGHCLWVVMPYMAGGSCLHIMKSAYPEGF--------------EEPVIATLLRETL--- 124
T ++++ Y G L+ ++S E F EE + L E L
Sbjct: 119 TLSGPIYLIFEYCCYGDLLNYLRSK-REKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCF 177
Query: 125 -----KALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVG 179
K + +L F +HRD+ A N+L+ +K+ DFG++ + + N +
Sbjct: 178 AYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLP 237
Query: 180 TPCWMAPEVMQQLHG-YDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPG 237
WMAPE + G Y K+D+WS+GI E+ + G P+ P +QN
Sbjct: 238 VK-WMAPESL--FEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNG--- 291
Query: 238 LDYERDKRF--SKSFKELVTACLVKDPKKRPT 267
++ D+ F ++ ++ +C D +KRP+
Sbjct: 292 --FKMDQPFYATEEIYIIMQSCWAFDSRKRPS 321
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 17/170 (10%)
Query: 110 GFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSN-GAIKLADFGVSACMFDAG 168
+E + + + L+A+ + H G +HRD+K NILID N G +KL DFG A + D
Sbjct: 106 ALQEELARSFFWQVLEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT- 164
Query: 169 DRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLL 228
F GT + PE ++ + A +WS GI ++ G PF
Sbjct: 165 ----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------- 213
Query: 229 MTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFK 278
+ G + R +R S + L+ CL P RPT E++ H + +
Sbjct: 214 ---EEIIRGQVFFR-QRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 259
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 17/170 (10%)
Query: 110 GFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSN-GAIKLADFGVSACMFDAG 168
+E + + + L+A+ + H G +HRD+K NILID N G +KL DFG A + D
Sbjct: 111 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT- 169
Query: 169 DRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLL 228
F GT + PE ++ + A +WS GI ++ G PF
Sbjct: 170 ----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------- 218
Query: 229 MTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFK 278
+ G + R +R S + L+ CL P RPT E++ H + +
Sbjct: 219 ---EEIIRGQVFFR-QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 264
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 17/170 (10%)
Query: 110 GFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSN-GAIKLADFGVSACMFDAG 168
+E + + + L+A+ + H G +HRD+K NILID N G +KL DFG A + D
Sbjct: 110 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT- 168
Query: 169 DRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLL 228
F GT + PE ++ + A +WS GI ++ G PF
Sbjct: 169 ----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------- 217
Query: 229 MTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFK 278
+ G + R +R S + L+ CL P RPT E++ H + +
Sbjct: 218 ---EEIIRGQVFFR-QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 263
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 82/172 (47%), Gaps = 14/172 (8%)
Query: 66 MRVTNHPNVLR--AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLL--- 120
M+ +HPNVL C + G L VV+PYM G + +++ P + L+
Sbjct: 77 MKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNET----HNPTVKDLIGFG 131
Query: 121 RETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGT 180
+ K + YL +HRD+ A N ++D +K+ADFG++ M+D T
Sbjct: 132 LQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL 191
Query: 181 PC-WMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTL 231
P WMA E +Q + K+D+WSFG+ EL AP YP + +T+
Sbjct: 192 PVKWMALESLQT-QKFTTKSDVWSFGVLLWELMTRGAP--PYPDVNTFDITV 240
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 82/172 (47%), Gaps = 14/172 (8%)
Query: 66 MRVTNHPNVLR--AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLL--- 120
M+ +HPNVL C + G L VV+PYM G + +++ P + L+
Sbjct: 104 MKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNET----HNPTVKDLIGFG 158
Query: 121 RETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGT 180
+ K + YL +HRD+ A N ++D +K+ADFG++ M+D T
Sbjct: 159 LQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL 218
Query: 181 PC-WMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTL 231
P WMA E +Q + K+D+WSFG+ EL AP YP + +T+
Sbjct: 219 PVKWMALESLQT-QKFTTKSDVWSFGVLLWELMTRGAP--PYPDVNTFDITV 267
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 17/170 (10%)
Query: 110 GFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSN-GAIKLADFGVSACMFDAG 168
+E + + + L+A+ + H G +HRD+K NILID N G +KL DFG A + D
Sbjct: 110 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT- 168
Query: 169 DRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLL 228
F GT + PE ++ + A +WS GI ++ G PF
Sbjct: 169 ----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------- 217
Query: 229 MTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFK 278
+ G + R +R S + L+ CL P RPT E++ H + +
Sbjct: 218 ---EEIIRGQVFFR-QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 263
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 82/172 (47%), Gaps = 14/172 (8%)
Query: 66 MRVTNHPNVLR--AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLL--- 120
M+ +HPNVL C + G L VV+PYM G + +++ P + L+
Sbjct: 83 MKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNET----HNPTVKDLIGFG 137
Query: 121 RETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGT 180
+ K + YL +HRD+ A N ++D +K+ADFG++ M+D T
Sbjct: 138 LQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL 197
Query: 181 PC-WMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTL 231
P WMA E +Q + K+D+WSFG+ EL AP YP + +T+
Sbjct: 198 PVKWMALESLQT-QKFTTKSDVWSFGVLLWELMTRGAP--PYPDVNTFDITV 246
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 17/170 (10%)
Query: 110 GFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSN-GAIKLADFGVSACMFDAG 168
+E + + + L+A+ + H G +HRD+K NILID N G +KL DFG A + D
Sbjct: 111 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT- 169
Query: 169 DRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLL 228
F GT + PE ++ + A +WS GI ++ G PF
Sbjct: 170 ----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------- 218
Query: 229 MTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFK 278
+ G + R +R S + L+ CL P RPT E++ H + +
Sbjct: 219 ---EEIIRGQVFFR-QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 264
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 17/170 (10%)
Query: 110 GFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSN-GAIKLADFGVSACMFDAG 168
+E + + + L+A+ + H G +HRD+K NILID N G +KL DFG A + D
Sbjct: 153 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT- 211
Query: 169 DRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLL 228
F GT + PE ++ + A +WS GI ++ G PF
Sbjct: 212 ----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------- 260
Query: 229 MTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFK 278
+ G + R +R S + L+ CL P RPT E++ H + +
Sbjct: 261 ---EEIIRGQVFFR-QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 306
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 17/170 (10%)
Query: 110 GFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSN-GAIKLADFGVSACMFDAG 168
+E + + + L+A+ + H G +HRD+K NILID N G +KL DFG A + D
Sbjct: 139 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT- 197
Query: 169 DRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLL 228
F GT + PE ++ + A +WS GI ++ G PF
Sbjct: 198 ----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------- 246
Query: 229 MTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFK 278
+ G + R +R S + L+ CL P RPT E++ H + +
Sbjct: 247 ---EEIIGGQVFFR-QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 292
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 101/231 (43%), Gaps = 17/231 (7%)
Query: 42 VAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLH 101
VAIK L + E M +HPN++ T + ++ YM GS
Sbjct: 39 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 98
Query: 102 IMKSAYPEG-FEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGV 160
++ +G F + +LR + YL ++HRD+ A NIL++SN K++DFG+
Sbjct: 99 FLRKN--DGRFTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGM 156
Query: 161 SACMFDAGDRQRSRNTFVG-TPC-WMAPEVMQQLHGYDFKADIWSFGITALE-LAHGHAP 217
S + D D + + T G P W APE + + +D+WS+GI E +++G P
Sbjct: 157 SRVLED--DPEAAYTTRGGKIPIRWTAPEAI-AYRKFTSASDVWSYGIVMWEVMSYGERP 213
Query: 218 FSKYPPMKVLLMTLQN--APPGLDYERDKRFSKSFKELVTACLVKDPKKRP 266
+ V+ + PP +D + +L+ C K+ RP
Sbjct: 214 YWDMSNQDVIKAIEEGYRLPPPMD------CPIALHQLMLDCWQKERSDRP 258
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 82/172 (47%), Gaps = 14/172 (8%)
Query: 66 MRVTNHPNVLR--AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLL--- 120
M+ +HPNVL C + G L VV+PYM G + +++ P + L+
Sbjct: 84 MKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNET----HNPTVKDLIGFG 138
Query: 121 RETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGT 180
+ K + YL +HRD+ A N ++D +K+ADFG++ M+D T
Sbjct: 139 LQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL 198
Query: 181 PC-WMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTL 231
P WMA E +Q + K+D+WSFG+ EL AP YP + +T+
Sbjct: 199 PVKWMALESLQT-QKFTTKSDVWSFGVLLWELMTRGAP--PYPDVNTFDITV 247
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 82/172 (47%), Gaps = 14/172 (8%)
Query: 66 MRVTNHPNVLR--AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLL--- 120
M+ +HPNVL C + G L VV+PYM G + +++ P + L+
Sbjct: 82 MKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNET----HNPTVKDLIGFG 136
Query: 121 RETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGT 180
+ K + YL +HRD+ A N ++D +K+ADFG++ M+D T
Sbjct: 137 LQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL 196
Query: 181 PC-WMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTL 231
P WMA E +Q + K+D+WSFG+ EL AP YP + +T+
Sbjct: 197 PVKWMALESLQT-QKFTTKSDVWSFGVLLWELMTRGAP--PYPDVNTFDITV 245
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 82/172 (47%), Gaps = 14/172 (8%)
Query: 66 MRVTNHPNVLR--AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLL--- 120
M+ +HPNVL C + G L VV+PYM G + +++ P + L+
Sbjct: 85 MKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNET----HNPTVKDLIGFG 139
Query: 121 RETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGT 180
+ K + YL +HRD+ A N ++D +K+ADFG++ M+D T
Sbjct: 140 LQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL 199
Query: 181 PC-WMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTL 231
P WMA E +Q + K+D+WSFG+ EL AP YP + +T+
Sbjct: 200 PVKWMALESLQT-QKFTTKSDVWSFGVLLWELMTRGAP--PYPDVNTFDITV 248
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 89/203 (43%), Gaps = 11/203 (5%)
Query: 22 VGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAHCSF 81
+G G VY+ + +VA+K L E+ + EV+ + + H N+LR
Sbjct: 38 LGRGGFGKVYKGR-LADGXLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 96
Query: 82 TTGHCLWVVMPYMAGGS---CLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGH--- 135
T +V PYMA GS CL + P + P + + + L YLH H
Sbjct: 97 MTPTERLLVYPYMANGSVASCLRERPESQPP-LDWPKRQRIALGSARGLAYLHDHCDPKI 155
Query: 136 IHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLHGY 195
IHRDVKA NIL+D + DFG++ M D D G +APE +
Sbjct: 156 IHRDVKAANILLDEEFEAVVGDFGLAKLM-DYKDXH-VXXAVRGXIGHIAPEYLSTGKSS 213
Query: 196 DFKADIWSFGITALELAHGHAPF 218
+ K D++ +G+ LEL G F
Sbjct: 214 E-KTDVFGYGVMLLELITGQRAF 235
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 17/170 (10%)
Query: 110 GFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSN-GAIKLADFGVSACMFDAG 168
+E + + + L+A+ + H G +HRD+K NILID N G +KL DFG A + D
Sbjct: 111 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT- 169
Query: 169 DRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLL 228
F GT + PE ++ + A +WS GI ++ G PF
Sbjct: 170 ----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------- 218
Query: 229 MTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFK 278
+ G + R +R S + L+ CL P RPT E++ H + +
Sbjct: 219 ---EEIIRGQVFFR-QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 264
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 126/308 (40%), Gaps = 42/308 (13%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR--REVQTMRVTNH 71
K Y+ + +G G V A L+ VAIK L N R RE+ M+ NH
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKXVNH 82
Query: 72 PNVLRAHCSFTTGHCL------WVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
N++ FT L ++VM M + + ++ LL + L
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-----LXQVIQMELDHERMSYLLYQMLC 137
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
+ +LH G IHRD+K NI++ S+ +K+ DFG++ AG +V T + A
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART---AGT-SFMMTPYVVTRYYRA 193
Query: 186 PEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKR 245
PEV+ + GY DIWS G E+ F PG DY +
Sbjct: 194 PEVILGM-GYKENVDIWSVGCIMGEMVRHKILF-----------------PGRDY--IDQ 233
Query: 246 FSKSFKELVTACLVKDPKKRPTAEKLMKHHFFKHARSNDFLARSIVDNLAPLGERFRMLK 305
++K ++L T C K +PT +++ + + + D+L P LK
Sbjct: 234 WNKVIEQLGTPCPEFMKKLQPTVRNYVEN---RPKYAGLTFPKLFPDSLFPADSEHNKLK 290
Query: 306 AKEA-DLL 312
A +A DLL
Sbjct: 291 ASQARDLL 298
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 17/170 (10%)
Query: 110 GFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSN-GAIKLADFGVSACMFDAG 168
+E + + + L+A+ + H G +HRD+K NILID N G +KL DFG A + D
Sbjct: 139 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT- 197
Query: 169 DRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLL 228
F GT + PE ++ + A +WS GI ++ G PF
Sbjct: 198 ----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------- 246
Query: 229 MTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFK 278
+ G + R +R S + L+ CL P RPT E++ H + +
Sbjct: 247 ---EEIIGGQVFFR-QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 292
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 17/170 (10%)
Query: 110 GFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSN-GAIKLADFGVSACMFDAG 168
+E + + + L+A+ + H G +HRD+K NILID N G +KL DFG A + D
Sbjct: 109 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT- 167
Query: 169 DRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLL 228
F GT + PE ++ + A +WS GI ++ G PF
Sbjct: 168 ----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------- 216
Query: 229 MTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFK 278
+ G + R +R S + L+ CL P RPT E++ H + +
Sbjct: 217 ---EEIIRGQVFFR-QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 262
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 17/170 (10%)
Query: 110 GFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSN-GAIKLADFGVSACMFDAG 168
+E + + + L+A+ + H G +HRD+K NILID N G +KL DFG A + D
Sbjct: 153 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT- 211
Query: 169 DRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLL 228
F GT + PE ++ + A +WS GI ++ G PF
Sbjct: 212 ----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------- 260
Query: 229 MTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFK 278
+ G + R +R S + L+ CL P RPT E++ H + +
Sbjct: 261 ---EEIIRGQVFFR-QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 306
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 112/265 (42%), Gaps = 24/265 (9%)
Query: 18 LYEEVGEGVSATVYRALCIPL-----NEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHP 72
L E+GEG V+ A C L +VA+K L + +N RE + + H
Sbjct: 17 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLK-DASDNARKDFHREAELLTNLQHE 75
Query: 73 NVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEG-----------FEEPVIATLLR 121
++++ + G L +V YM G +++ P+ + + + +
Sbjct: 76 HIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQ 135
Query: 122 ETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTP 181
+ +VYL +HRD+ N L+ N +K+ DFG+S ++ + +T +
Sbjct: 136 QIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIR 195
Query: 182 CWMAPEVMQQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDY 240
WM PE + + ++D+WS G+ E+ +G P+ + +V+ Q G
Sbjct: 196 -WMPPESI-MYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQ----GRVL 249
Query: 241 ERDKRFSKSFKELVTACLVKDPKKR 265
+R + + EL+ C ++P R
Sbjct: 250 QRPRTCPQEVYELMLGCWQREPHMR 274
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 17/170 (10%)
Query: 110 GFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSN-GAIKLADFGVSACMFDAG 168
+E + + + L+A+ + H G +HRD+K NILID N G +KL DFG A + D
Sbjct: 138 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT- 196
Query: 169 DRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLL 228
F GT + PE ++ + A +WS GI ++ G PF
Sbjct: 197 ----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------- 245
Query: 229 MTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFK 278
+ G + R +R S + L+ CL P RPT E++ H + +
Sbjct: 246 ---EEIIGGQVFFR-QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 291
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 17/170 (10%)
Query: 110 GFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSN-GAIKLADFGVSACMFDAG 168
+E + + + L+A+ + H G +HRD+K NILID N G +KL DFG A + D
Sbjct: 106 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT- 164
Query: 169 DRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLL 228
F GT + PE ++ + A +WS GI ++ G PF
Sbjct: 165 ----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------- 213
Query: 229 MTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFK 278
+ G + R +R S + L+ CL P RPT E++ H + +
Sbjct: 214 ---EEIIGGQVFFR-QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 259
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 82/172 (47%), Gaps = 14/172 (8%)
Query: 66 MRVTNHPNVLR--AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLL--- 120
M+ +HPNVL C + G L VV+PYM G + +++ P + L+
Sbjct: 80 MKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNET----HNPTVKDLIGFG 134
Query: 121 RETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGT 180
+ K + YL +HRD+ A N ++D +K+ADFG++ M+D T
Sbjct: 135 LQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL 194
Query: 181 PC-WMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTL 231
P WMA E +Q + K+D+WSFG+ EL AP YP + +T+
Sbjct: 195 PVKWMALESLQT-QKFTTKSDVWSFGVLLWELMTRGAP--PYPDVNTFDITV 243
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 97/208 (46%), Gaps = 23/208 (11%)
Query: 22 VGEGVSATVYRALCIPLNEIVAIK-VLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAHCS 80
+G G VY+A E+VAIK VL ++ N RE+Q MR +H N++R
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNIVRLRYF 81
Query: 81 FTTGH------CLWVVMPYMAGGSCLHIMKSAYPEGFEE-PVIATLLR--ETLKALVYLH 131
F + L +V+ Y+ ++ + Y + PVI L + ++L Y+H
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 132 FHGHIHRDVKAGNILIDSNGAI-KLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
G HRD+K N+L+D + A+ KL DFG SA G+ S ++ + + APE++
Sbjct: 140 SFGICHRDIKPQNLLLDPDTAVLKLCDFG-SAKQLVRGEPNVS---YICSRYYRAPELIF 195
Query: 191 QLHGYDFKADIWSFGITALELAHGHAPF 218
Y D+WS G EL G F
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 17/170 (10%)
Query: 110 GFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSN-GAIKLADFGVSACMFDAG 168
+E + + + L+A+ + H G +HRD+K NILID N G +KL DFG A + D
Sbjct: 138 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT- 196
Query: 169 DRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLL 228
F GT + PE ++ + A +WS GI ++ G PF
Sbjct: 197 ----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------- 245
Query: 229 MTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFK 278
+ G + R +R S + L+ CL P RPT E++ H + +
Sbjct: 246 ---EEIIRGQVFFR-QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 291
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 17/170 (10%)
Query: 110 GFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSN-GAIKLADFGVSACMFDAG 168
+E + + + L+A+ + H G +HRD+K NILID N G +KL DFG A + D
Sbjct: 106 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT- 164
Query: 169 DRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLL 228
F GT + PE ++ + A +WS GI ++ G PF
Sbjct: 165 ----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------- 213
Query: 229 MTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFK 278
+ G + R +R S + L+ CL P RPT E++ H + +
Sbjct: 214 ---EEIIRGQVFFR-QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 259
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 17/170 (10%)
Query: 110 GFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSN-GAIKLADFGVSACMFDAG 168
+E + + + L+A+ + H G +HRD+K NILID N G +KL DFG A + D
Sbjct: 125 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT- 183
Query: 169 DRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLL 228
F GT + PE ++ + A +WS GI ++ G PF
Sbjct: 184 ----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------- 232
Query: 229 MTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFK 278
+ G + R +R S + L+ CL P RPT E++ H + +
Sbjct: 233 ---EEIIRGQVFFR-QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 278
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 17/170 (10%)
Query: 110 GFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSN-GAIKLADFGVSACMFDAG 168
+E + + + L+A+ + H G +HRD+K NILID N G +KL DFG A + D
Sbjct: 139 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT- 197
Query: 169 DRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLL 228
F GT + PE ++ + A +WS GI ++ G PF
Sbjct: 198 ----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------- 246
Query: 229 MTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFK 278
+ G + R +R S + L+ CL P RPT E++ H + +
Sbjct: 247 ---EEIIGGQVFFR-QRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 292
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 17/170 (10%)
Query: 110 GFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSN-GAIKLADFGVSACMFDAG 168
+E + + + L+A+ + H G +HRD+K NILID N G +KL DFG A + D
Sbjct: 138 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT- 196
Query: 169 DRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLL 228
F GT + PE ++ + A +WS GI ++ G PF
Sbjct: 197 ----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------- 245
Query: 229 MTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFK 278
+ G + R +R S + L+ CL P RPT E++ H + +
Sbjct: 246 ---EEIIGGQVFFR-QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 291
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 117/267 (43%), Gaps = 44/267 (16%)
Query: 42 VAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYM------- 94
VA+K + ++ C+ L I+ ++ +HPNV+R +CS TT L++ +
Sbjct: 60 VAVKRMLIDFCDIALMEIKLLTES---DDHPNVIRYYCSETTDRFLYIALELCNLNLQDL 116
Query: 95 -----AGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDS 149
L + K P +LLR+ + +LH IHRD+K NIL+ +
Sbjct: 117 VESKNVSDENLKLQKEYNP--------ISLLRQIASGVAHLHSLKIIHRDLKPQNILVST 168
Query: 150 -------------NGAIKLADFGVSACMFDAGDR--QRSRNTFVGTPCWMAPEVMQQLHG 194
N I ++DFG+ + D+G + + N GT W APE++++
Sbjct: 169 SSRFTADQQTGAENLRILISDFGLCKKL-DSGQXXFRXNLNNPSGTSGWRAPELLEESTK 227
Query: 195 YDF--KADIWSFG-ITALELAHGHAPFS-KYPPMKVLLMTLQNAPPGLDYERDKRFSKSF 250
DI+S G + L+ G PF KY ++ + + + D+
Sbjct: 228 RRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDE-MKCLHDRSLIAEA 286
Query: 251 KELVTACLVKDPKKRPTAEKLMKHHFF 277
+L++ + DP KRPTA K+++H F
Sbjct: 287 TDLISQMIDHDPLKRPTAMKVLRHPLF 313
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 17/170 (10%)
Query: 110 GFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSN-GAIKLADFGVSACMFDAG 168
+E + + + L+A+ + H G +HRD+K NILID N G +KL DFG A + D
Sbjct: 126 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT- 184
Query: 169 DRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLL 228
F GT + PE ++ + A +WS GI ++ G PF
Sbjct: 185 ----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------- 233
Query: 229 MTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFK 278
+ G + R +R S + L+ CL P RPT E++ H + +
Sbjct: 234 ---EEIIRGQVFFR-QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 279
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 17/170 (10%)
Query: 110 GFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSN-GAIKLADFGVSACMFDAG 168
+E + + + L+A+ + H G +HRD+K NILID N G +KL DFG A + D
Sbjct: 138 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT- 196
Query: 169 DRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLL 228
F GT + PE ++ + A +WS GI ++ G PF
Sbjct: 197 ----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------- 245
Query: 229 MTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFK 278
+ G + R +R S + L+ CL P RPT E++ H + +
Sbjct: 246 ---EEIIGGQVFFR-QRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 291
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 17/170 (10%)
Query: 110 GFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSN-GAIKLADFGVSACMFDAG 168
+E + + + L+A+ + H G +HRD+K NILID N G +KL DFG A + D
Sbjct: 125 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT- 183
Query: 169 DRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLL 228
F GT + PE ++ + A +WS GI ++ G PF
Sbjct: 184 ----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------- 232
Query: 229 MTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFK 278
+ G + R +R S + L+ CL P RPT E++ H + +
Sbjct: 233 ---EEIIRGQVFFR-QRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 278
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 17/170 (10%)
Query: 110 GFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSN-GAIKLADFGVSACMFDAG 168
+E + + + L+A+ + H G +HRD+K NILID N G +KL DFG A + D
Sbjct: 139 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT- 197
Query: 169 DRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLL 228
F GT + PE ++ + A +WS GI ++ G PF
Sbjct: 198 ----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------- 246
Query: 229 MTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFK 278
+ G + R +R S + L+ CL P RPT E++ H + +
Sbjct: 247 ---EEIIGGQVFFR-QRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 292
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 94/211 (44%), Gaps = 19/211 (9%)
Query: 22 VGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQ------TMRVTNHPNVL 75
+G G TVY+ + +P E V I V K N+ G + V+ M +HP+++
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAI--KILNETTGPKANVEFMDEALIMASMDHPHLV 103
Query: 76 R--AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFH 133
R C T + +MP+ CL + + ++ + K ++YL
Sbjct: 104 RLLGVCLSPTIQLVTQLMPH----GCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEER 159
Query: 134 GHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPC-WMAPEVMQQL 192
+HRD+ A N+L+ S +K+ DFG++ + GD + P WMA E +
Sbjct: 160 RLVHRDLAARNVLVKSPNHVKITDFGLARLL--EGDEKEYNADGGKMPIKWMALECIHY- 216
Query: 193 HGYDFKADIWSFGITALEL-AHGHAPFSKYP 222
+ ++D+WS+G+T EL G P+ P
Sbjct: 217 RKFTHQSDVWSYGVTIWELMTFGGKPYDGIP 247
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 76/169 (44%), Gaps = 17/169 (10%)
Query: 111 FEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSN-GAIKLADFGVSACMFDAGD 169
+E + + + L+A+ + H G +HRD+K NILID N G +KL DFG A + D
Sbjct: 146 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-- 203
Query: 170 RQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLM 229
F GT + PE ++ + A +WS GI ++ G PF
Sbjct: 204 ---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD-------- 252
Query: 230 TLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFK 278
+ G + R +R S + L+ CL P RPT E++ H + +
Sbjct: 253 --EEIIRGQVFFR-QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 298
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 17/170 (10%)
Query: 110 GFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSN-GAIKLADFGVSACMFDAG 168
+E + + + L+A+ + H G +HRD+K NILID N G +KL DFG A + D
Sbjct: 126 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT- 184
Query: 169 DRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLL 228
F GT + PE ++ + A +WS GI ++ G PF
Sbjct: 185 ----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------- 233
Query: 229 MTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFK 278
+ G + R +R S + L+ CL P RPT E++ H + +
Sbjct: 234 ---EEIIRGQVFFR-QRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 279
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 108/264 (40%), Gaps = 16/264 (6%)
Query: 11 VDAKDYRLYEEVGEGVSATVYRA-LCIPLNE--IVAIKVLDLEKCNNDLDGIRREVQTMR 67
+D ++ E +G G V R L P + VAIK L E M
Sbjct: 13 IDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMG 72
Query: 68 VTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKAL 127
HPN++R T + ++ +M G+ ++ + F + +LR +
Sbjct: 73 QFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQ-FTVIQLVGMLRGIASGM 131
Query: 128 VYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVG-TPC-WMA 185
YL ++HRD+ A NIL++SN K++DFG+S + + ++ G P W A
Sbjct: 132 RYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTA 191
Query: 186 PEVMQQLHGYDFKADIWSFGITALE-LAHGHAPFSKYPPMKVLLMTLQN--APPGLDYER 242
PE + + +D WS+GI E ++ G P+ V+ Q+ PP D
Sbjct: 192 PEAI-AFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRLPPPPDC-- 248
Query: 243 DKRFSKSFKELVTACLVKDPKKRP 266
S +L+ C KD RP
Sbjct: 249 ----PTSLHQLMLDCWQKDRNARP 268
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 17/170 (10%)
Query: 110 GFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSN-GAIKLADFGVSACMFDAG 168
+E + + + L+A+ + H G +HRD+K NILID N G +KL DFG A + D
Sbjct: 153 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT- 211
Query: 169 DRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLL 228
F GT + PE ++ + A +WS GI ++ G PF
Sbjct: 212 ----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------- 260
Query: 229 MTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFK 278
+ G + R +R S + L+ CL P RPT E++ H + +
Sbjct: 261 ---EEIIRGQVFFR-QRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 306
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 117/267 (43%), Gaps = 44/267 (16%)
Query: 42 VAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYM------- 94
VA+K + ++ C+ L I+ ++ +HPNV+R +CS TT L++ +
Sbjct: 60 VAVKRMLIDFCDIALMEIKLLTES---DDHPNVIRYYCSETTDRFLYIALELCNLNLQDL 116
Query: 95 -----AGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDS 149
L + K P +LLR+ + +LH IHRD+K NIL+ +
Sbjct: 117 VESKNVSDENLKLQKEYNP--------ISLLRQIASGVAHLHSLKIIHRDLKPQNILVST 168
Query: 150 -------------NGAIKLADFGVSACMFDAGDR--QRSRNTFVGTPCWMAPEVMQQLHG 194
N I ++DFG+ + D+G + + N GT W APE++++
Sbjct: 169 SSRFTADQQTGAENLRILISDFGLCKKL-DSGQXXFRXNLNNPSGTSGWRAPELLEESTK 227
Query: 195 YDF--KADIWSFG-ITALELAHGHAPFS-KYPPMKVLLMTLQNAPPGLDYERDKRFSKSF 250
DI+S G + L+ G PF KY ++ + + + D+
Sbjct: 228 RRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDE-MKCLHDRSLIAEA 286
Query: 251 KELVTACLVKDPKKRPTAEKLMKHHFF 277
+L++ + DP KRPTA K+++H F
Sbjct: 287 TDLISQMIDHDPLKRPTAMKVLRHPLF 313
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 17/170 (10%)
Query: 110 GFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSN-GAIKLADFGVSACMFDAG 168
+E + + + L+A+ + H G +HRD+K NILID N G +KL DFG A + D
Sbjct: 126 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT- 184
Query: 169 DRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLL 228
F GT + PE ++ + A +WS GI ++ G PF
Sbjct: 185 ----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------- 233
Query: 229 MTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFK 278
+ G + R +R S + L+ CL P RPT E++ H + +
Sbjct: 234 ---EEIIRGQVFFR-QRVSXECQHLIRWCLALRPXDRPTFEEIQNHPWMQ 279
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 76/169 (44%), Gaps = 17/169 (10%)
Query: 111 FEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSN-GAIKLADFGVSACMFDAGD 169
+E + + + L+A+ + H G +HRD+K NILID N G +KL DFG A + D
Sbjct: 134 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-- 191
Query: 170 RQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLM 229
F GT + PE ++ + A +WS GI ++ G PF
Sbjct: 192 ---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD-------- 240
Query: 230 TLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFK 278
+ G + R +R S + L+ CL P RPT E++ H + +
Sbjct: 241 --EEIIRGQVFFR-QRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 286
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 100/221 (45%), Gaps = 25/221 (11%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLE-------KCNNDLDGIRREVQTMR 67
+++ + +G G TVY+ L IP E V I V +E K N + I E M
Sbjct: 50 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKE---ILDEAYVMA 106
Query: 68 VTNHPNVLR--AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
++P+V R C +T + +MP+ CL + + + + K
Sbjct: 107 SVDNPHVCRLLGICLTSTVQLITQLMPF----GCLLDYVREHKDNIGSQYLLNWCVQIAK 162
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVG-TPC-W 183
+ YL +HRD+ A N+L+ + +K+ DFG++ + G ++ + G P W
Sbjct: 163 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL---GAEEKEYHAEGGKVPIKW 219
Query: 184 MAPEVMQQLHG-YDFKADIWSFGITALEL-AHGHAPFSKYP 222
MA E + LH Y ++D+WS+G+T EL G P+ P
Sbjct: 220 MALESI--LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 258
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 17/170 (10%)
Query: 110 GFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSN-GAIKLADFGVSACMFDAG 168
+E + + + L+A+ + H G +HRD+K NILID N G +KL DFG A + D
Sbjct: 158 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT- 216
Query: 169 DRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLL 228
F GT + PE ++ + A +WS GI ++ G PF
Sbjct: 217 ----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------- 265
Query: 229 MTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFK 278
+ G + R +R S + L+ CL P RPT E++ H + +
Sbjct: 266 ---EEIIRGQVFFR-QRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 311
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 91/213 (42%), Gaps = 19/213 (8%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR--REVQTMRVTNH 71
K Y+ + +G G V A L VAIK L N R RE+ M+ NH
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNH 82
Query: 72 PNVLRAHCSFTTGHCL------WVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
N++ FT L ++VM M + + ++ LL + L
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-----LSQVIQMELDHERMSYLLYQMLC 137
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
+ +LH G IHRD+K NI++ S+ +K+ DFG++ AG +V T + A
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGT-SFMMTPYVVTRYYRA 193
Query: 186 PEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
PEV+ + GY DIWS G E+ G F
Sbjct: 194 PEVILGM-GYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 23/208 (11%)
Query: 22 VGEGVSATVYRALCIPLNEIVAIK-VLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAHCS 80
+G G VY+A E+VAIK VL ++ N RE+Q MR +H N++R
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNIVRLRYF 115
Query: 81 FTTGH------CLWVVMPYMAGGSCLHIMKSAYPEGFEE-PVIATLLR--ETLKALVYLH 131
F + L +V+ Y+ ++ + Y + PVI L + ++L Y+H
Sbjct: 116 FYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 173
Query: 132 FHGHIHRDVKAGNILIDSNGAI-KLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
G HRD+K N+L+D + A+ KL DFG + + R + + + + APE++
Sbjct: 174 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV----RGEPNVSXICSRYYRAPELIF 229
Query: 191 QLHGYDFKADIWSFGITALELAHGHAPF 218
Y D+WS G EL G F
Sbjct: 230 GATDYTSSIDVWSAGCVLAELLLGQPIF 257
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 103/255 (40%), Gaps = 40/255 (15%)
Query: 61 REVQTMRVTNHPNVLRAHCSFTTGHCL-----WVVMPYMAGGSCLHIMKSAYPEGFEEPV 115
RE++ ++ H NV+ FT L ++ ++ G +I+KS + +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKS---QKLTDDH 126
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
+ L+ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG+ D
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDD------EMT 180
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 234
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 235 PPG------LDYERDKRFSKSFKE-------------------LVTACLVKDPKKRPTAE 269
PG + E + + +S + L+ LV D KR TA
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 270 KLMKHHFFKHARSND 284
+ + H +F D
Sbjct: 301 QALAHAYFAQYHDPD 315
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 100/231 (43%), Gaps = 17/231 (7%)
Query: 42 VAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLH 101
VAIK L + E M +HPN++ T + ++ YM GS
Sbjct: 60 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 119
Query: 102 IMKSAYPEG-FEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGV 160
++ +G F + +LR + YL +HRD+ A NIL++SN K++DFG+
Sbjct: 120 FLRKN--DGRFTVIQLVGMLRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGM 177
Query: 161 SACMFDAGDRQRSRNTFVG-TPC-WMAPEVMQQLHGYDFKADIWSFGITALE-LAHGHAP 217
S + D D + + T G P W APE + + +D+WS+GI E +++G P
Sbjct: 178 SRVLED--DPEAAYTTRGGKIPIRWTAPEAI-AYRKFTSASDVWSYGIVMWEVMSYGERP 234
Query: 218 FSKYPPMKVLLMTLQN--APPGLDYERDKRFSKSFKELVTACLVKDPKKRP 266
+ V+ + PP +D + +L+ C K+ RP
Sbjct: 235 YWDMSNQDVIKAIEEGYRLPPPMD------CPIALHQLMLDCWQKERSDRP 279
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 96/208 (46%), Gaps = 23/208 (11%)
Query: 22 VGEGVSATVYRALCIPLNEIVAIK-VLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAHCS 80
+G G VY+A E+VAIK VL ++ N RE+Q MR +H N++R
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNIVRLRYF 93
Query: 81 FTTGH------CLWVVMPYMAGGSCLHIMKSAYPEGFEE-PVIATLLR--ETLKALVYLH 131
F + L +V+ Y+ ++ + Y + PVI L + ++L Y+H
Sbjct: 94 FYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 151
Query: 132 FHGHIHRDVKAGNILIDSNGAI-KLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
G HRD+K N+L+D + A+ KL DFG SA G+ S + + + APE++
Sbjct: 152 SFGICHRDIKPQNLLLDPDTAVLKLCDFG-SAKQLVRGEPNVSX---ICSRYYRAPELIF 207
Query: 191 QLHGYDFKADIWSFGITALELAHGHAPF 218
Y D+WS G EL G F
Sbjct: 208 GATDYTSSIDVWSAGCVLAELLLGQPIF 235
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 96/208 (46%), Gaps = 23/208 (11%)
Query: 22 VGEGVSATVYRALCIPLNEIVAIK-VLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAHCS 80
+G G VY+A E+VAIK VL ++ N RE+Q MR +H N++R
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNIVRLRYF 93
Query: 81 FTTGH------CLWVVMPYMAGGSCLHIMKSAYPEGFEE-PVIATLLR--ETLKALVYLH 131
F + L +V+ Y+ ++ + Y + PVI L + ++L Y+H
Sbjct: 94 FYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 151
Query: 132 FHGHIHRDVKAGNILIDSNGAI-KLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
G HRD+K N+L+D + A+ KL DFG SA G+ S + + + APE++
Sbjct: 152 SFGICHRDIKPQNLLLDPDTAVLKLCDFG-SAKQLVRGEPNVSX---ICSRYYRAPELIF 207
Query: 191 QLHGYDFKADIWSFGITALELAHGHAPF 218
Y D+WS G EL G F
Sbjct: 208 GATDYTSSIDVWSAGCVLAELLLGQPIF 235
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 96/208 (46%), Gaps = 23/208 (11%)
Query: 22 VGEGVSATVYRALCIPLNEIVAIK-VLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAHCS 80
+G G VY+A E+VAIK VL ++ N RE+Q MR +H N++R
Sbjct: 36 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNIVRLRYF 89
Query: 81 FTTGH------CLWVVMPYMAGGSCLHIMKSAYPEGFEE-PVIATLLR--ETLKALVYLH 131
F + L +V+ Y+ ++ + Y + PVI L + ++L Y+H
Sbjct: 90 FYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 147
Query: 132 FHGHIHRDVKAGNILIDSNGAI-KLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
G HRD+K N+L+D + A+ KL DFG SA G+ S + + + APE++
Sbjct: 148 SFGICHRDIKPQNLLLDPDTAVLKLCDFG-SAKQLVRGEPNVSX---ICSRYYRAPELIF 203
Query: 191 QLHGYDFKADIWSFGITALELAHGHAPF 218
Y D+WS G EL G F
Sbjct: 204 GATDYTSSIDVWSAGCVLAELLLGQPIF 231
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 135/334 (40%), Gaps = 43/334 (12%)
Query: 14 KDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR--REVQTMRVTNH 71
K Y+ + +G G V A L VAIK L N R RE+ M+ NH
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMKCVNH 82
Query: 72 PNVLRAHCSFTTGHCL------WVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
N++ FT L ++VM M C I + ++ LL + L
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----LDHERMSYLLYQMLC 137
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
+ +LH G IHRD+K NI++ S+ +K+ DFG++ AG V T + A
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMMEPEVV-TRYYRA 193
Query: 186 PEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKR 245
PEV+ + GY D+WS G E+ F PG DY +
Sbjct: 194 PEVILGM-GYKENVDLWSVGCIMGEMVCHKILF-----------------PGRDY--IDQ 233
Query: 246 FSKSFKELVTACLVKDPKKRPTAEKLMKHHFFKHARSNDFLARSIVDNLAPLGERFRMLK 305
++K ++L T C K +PT +++ + + + D L P LK
Sbjct: 234 WNKVIEQLGTPCPEFMKKLQPTVRTYVEN---RPKYAGYSFEKLFPDVLFPADSEHNKLK 290
Query: 306 AKEADLLVQNKALYEDKEQLSQQEYIRG--ISAW 337
A +A L+ + + +++S E ++ I+ W
Sbjct: 291 ASQARDLLSKMLVIDASKRISVDEALQHPYINVW 324
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 96/208 (46%), Gaps = 23/208 (11%)
Query: 22 VGEGVSATVYRALCIPLNEIVAIK-VLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAHCS 80
+G G VY+A E+VAIK VL ++ N RE+Q MR +H N++R
Sbjct: 47 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNIVRLRYF 100
Query: 81 FTTGH------CLWVVMPYMAGGSCLHIMKSAYPEGFEE-PVIATLLR--ETLKALVYLH 131
F + L +V+ Y+ ++ + Y + PVI L + ++L Y+H
Sbjct: 101 FYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 158
Query: 132 FHGHIHRDVKAGNILIDSNGAI-KLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
G HRD+K N+L+D + A+ KL DFG SA G+ S + + + APE++
Sbjct: 159 SFGICHRDIKPQNLLLDPDTAVLKLCDFG-SAKQLVRGEPNVSX---ICSRYYRAPELIF 214
Query: 191 QLHGYDFKADIWSFGITALELAHGHAPF 218
Y D+WS G EL G F
Sbjct: 215 GATDYTSSIDVWSAGCVLAELLLGQPIF 242
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 23/208 (11%)
Query: 22 VGEGVSATVYRALCIPLNEIVAIK-VLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAHCS 80
+G G VY+A E+VAIK VL + N RE+Q MR +H N++R
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN------RELQIMRKLDHCNIVRLRYF 81
Query: 81 FTTGH------CLWVVMPYMAGGSCLHIMKSAYPEGFEE-PVIATLLR--ETLKALVYLH 131
F + L +V+ Y+ ++ + Y + PVI L + ++L Y+H
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 132 FHGHIHRDVKAGNILIDSNGAI-KLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
G HRD+K N+L+D + A+ KL DFG + + R +++ + + APE++
Sbjct: 140 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV----RGEPNVSYICSRYYRAPELIF 195
Query: 191 QLHGYDFKADIWSFGITALELAHGHAPF 218
Y D+WS G EL G F
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 82/172 (47%), Gaps = 14/172 (8%)
Query: 66 MRVTNHPNVLR--AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLL--- 120
M+ +HPNVL C + G L VV+PYM G + +++ P + L+
Sbjct: 144 MKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNET----HNPTVKDLIGFG 198
Query: 121 RETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGT 180
+ K + +L +HRD+ A N ++D +K+ADFG++ M+D T
Sbjct: 199 LQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL 258
Query: 181 PC-WMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTL 231
P WMA E +Q + K+D+WSFG+ EL AP YP + +T+
Sbjct: 259 PVKWMALESLQT-QKFTTKSDVWSFGVLLWELMTRGAP--PYPDVNTFDITV 307
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 95/208 (45%), Gaps = 23/208 (11%)
Query: 22 VGEGVSATVYRALCIPLNEIVAIK-VLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAHCS 80
+G G VY+A E+VAIK VL + N RE+Q MR +H N++R
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN------RELQIMRKLDHCNIVRLRYF 81
Query: 81 FTTGH------CLWVVMPYMAGGSCLHIMKSAYPEGFEE-PVIAT--LLRETLKALVYLH 131
F + L +V+ Y+ ++ + Y + PVI + + ++L Y+H
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 132 FHGHIHRDVKAGNILIDSNGAI-KLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
G HRD+K N+L+D + A+ KL DFG + + R +++ + + APE++
Sbjct: 140 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV----RGEPNVSYICSRYYRAPELIF 195
Query: 191 QLHGYDFKADIWSFGITALELAHGHAPF 218
Y D+WS G EL G F
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 108/264 (40%), Gaps = 16/264 (6%)
Query: 11 VDAKDYRLYEEVGEGVSATVYRA-LCIPLNE--IVAIKVLDLEKCNNDLDGIRREVQTMR 67
+D ++ E +G G V R L P + VAIK L E M
Sbjct: 11 IDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMG 70
Query: 68 VTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKAL 127
HPN++R T + ++ +M G+ ++ + F + +LR +
Sbjct: 71 QFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQ-FTVIQLVGMLRGIASGM 129
Query: 128 VYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVG-TPC-WMA 185
YL ++HRD+ A NIL++SN K++DFG+S + + ++ G P W A
Sbjct: 130 RYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTA 189
Query: 186 PEVMQQLHGYDFKADIWSFGITALE-LAHGHAPFSKYPPMKVLLMTLQN--APPGLDYER 242
PE + + +D WS+GI E ++ G P+ V+ Q+ PP D
Sbjct: 190 PEAI-AFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRLPPPPDC-- 246
Query: 243 DKRFSKSFKELVTACLVKDPKKRP 266
S +L+ C KD RP
Sbjct: 247 ----PTSLHQLMLDCWQKDRNARP 266
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 82/172 (47%), Gaps = 14/172 (8%)
Query: 66 MRVTNHPNVLR--AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLL--- 120
M+ +HPNVL C + G L VV+PYM G + +++ P + L+
Sbjct: 86 MKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNET----HNPTVKDLIGFG 140
Query: 121 RETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGT 180
+ K + +L +HRD+ A N ++D +K+ADFG++ M+D T
Sbjct: 141 LQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL 200
Query: 181 PC-WMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTL 231
P WMA E +Q + K+D+WSFG+ EL AP YP + +T+
Sbjct: 201 PVKWMALESLQT-QKFTTKSDVWSFGVLLWELMTRGAP--PYPDVNTFDITV 249
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 96/208 (46%), Gaps = 23/208 (11%)
Query: 22 VGEGVSATVYRALCIPLNEIVAIK-VLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAHCS 80
+G G VY+A E+VAIK VL ++ N RE+Q MR +H N++R
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNIVRLRYF 81
Query: 81 FTTGH------CLWVVMPYMAGGSCLHIMKSAYPEGFEE-PVIATLLR--ETLKALVYLH 131
F + L +V+ Y+ ++ + Y + PVI L + ++L Y+H
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 132 FHGHIHRDVKAGNILIDSNGAI-KLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
G HRD+K N+L+D + A+ KL DFG SA G+ S + + + APE++
Sbjct: 140 SFGICHRDIKPQNLLLDPDTAVLKLCDFG-SAKQLVRGEPNVSX---ICSRYYRAPELIF 195
Query: 191 QLHGYDFKADIWSFGITALELAHGHAPF 218
Y D+WS G EL G F
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 99/221 (44%), Gaps = 25/221 (11%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLE-------KCNNDLDGIRREVQTMR 67
+++ + +G G TVY+ L IP E V I V E K N + I E M
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE---ILDEAYVMA 76
Query: 68 VTNHPNVLR--AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
++P+V R C +T + +MP+ CL + + + + K
Sbjct: 77 SVDNPHVCRLLGICLTSTVQLIMQLMPF----GCLLDYVREHKDNIGSQYLLNWCVQIAK 132
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVG-TPC-W 183
+ YL +HRD+ A N+L+ + +K+ DFG++ + G ++ + G P W
Sbjct: 133 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL---GAEEKEYHAEGGKVPIKW 189
Query: 184 MAPEVMQQLHG-YDFKADIWSFGITALEL-AHGHAPFSKYP 222
MA E + LH Y ++D+WS+G+T EL G P+ P
Sbjct: 190 MALESI--LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 228
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 82/172 (47%), Gaps = 14/172 (8%)
Query: 66 MRVTNHPNVLR--AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLL--- 120
M+ +HPNVL C + G L VV+PYM G + +++ P + L+
Sbjct: 85 MKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNET----HNPTVKDLIGFG 139
Query: 121 RETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGT 180
+ K + +L +HRD+ A N ++D +K+ADFG++ M+D T
Sbjct: 140 LQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL 199
Query: 181 PC-WMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTL 231
P WMA E +Q + K+D+WSFG+ EL AP YP + +T+
Sbjct: 200 PVKWMALESLQT-QKFTTKSDVWSFGVLLWELMTRGAP--PYPDVNTFDITV 248
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 82/172 (47%), Gaps = 14/172 (8%)
Query: 66 MRVTNHPNVLR--AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLL--- 120
M+ +HPNVL C + G L VV+PYM G + +++ P + L+
Sbjct: 83 MKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNET----HNPTVKDLIGFG 137
Query: 121 RETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGT 180
+ K + +L +HRD+ A N ++D +K+ADFG++ M+D T
Sbjct: 138 LQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL 197
Query: 181 PC-WMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTL 231
P WMA E +Q + K+D+WSFG+ EL AP YP + +T+
Sbjct: 198 PVKWMALESLQT-QKFTTKSDVWSFGVLLWELMTRGAP--PYPDVNTFDITV 246
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 96/208 (46%), Gaps = 23/208 (11%)
Query: 22 VGEGVSATVYRALCIPLNEIVAIK-VLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAHCS 80
+G G VY+A E+VAIK VL ++ N RE+Q MR +H N++R
Sbjct: 32 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNIVRLRYF 85
Query: 81 FTTGH------CLWVVMPYMAGGSCLHIMKSAYPEGFEE-PVIATLLR--ETLKALVYLH 131
F + L +V+ Y+ ++ + Y + PVI L + ++L Y+H
Sbjct: 86 FYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 143
Query: 132 FHGHIHRDVKAGNILIDSNGAI-KLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
G HRD+K N+L+D + A+ KL DFG SA G+ S + + + APE++
Sbjct: 144 SFGICHRDIKPQNLLLDPDTAVLKLCDFG-SAKQLVRGEPNVSX---ICSRYYRAPELIF 199
Query: 191 QLHGYDFKADIWSFGITALELAHGHAPF 218
Y D+WS G EL G F
Sbjct: 200 GATDYTSSIDVWSAGCVLAELLLGQPIF 227
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 99/221 (44%), Gaps = 25/221 (11%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLE-------KCNNDLDGIRREVQTMR 67
+++ + +G G TVY+ L IP E V I V E K N + I E M
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE---ILDEAYVMA 74
Query: 68 VTNHPNVLR--AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
++P+V R C +T + +MP+ CL + + + + K
Sbjct: 75 SVDNPHVCRLLGICLTSTVQLIMQLMPF----GCLLDYVREHKDNIGSQYLLNWCVQIAK 130
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVG-TPC-W 183
+ YL +HRD+ A N+L+ + +K+ DFG++ + G ++ + G P W
Sbjct: 131 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL---GAEEKEYHAEGGKVPIKW 187
Query: 184 MAPEVMQQLHG-YDFKADIWSFGITALEL-AHGHAPFSKYP 222
MA E + LH Y ++D+WS+G+T EL G P+ P
Sbjct: 188 MALESI--LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 226
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 96/208 (46%), Gaps = 23/208 (11%)
Query: 22 VGEGVSATVYRALCIPLNEIVAIK-VLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAHCS 80
+G G VY+A E+VAIK VL ++ N RE+Q MR +H N++R
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNIVRLRYF 81
Query: 81 FTTGH------CLWVVMPYMAGGSCLHIMKSAYPEGFEE-PVIATLLR--ETLKALVYLH 131
F + L +V+ Y+ ++ + Y + PVI L + ++L Y+H
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 132 FHGHIHRDVKAGNILIDSNGAI-KLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
G HRD+K N+L+D + A+ KL DFG SA G+ S + + + APE++
Sbjct: 140 SFGICHRDIKPQNLLLDPDTAVLKLCDFG-SAKQLVRGEPNVSX---ICSRYYRAPELIF 195
Query: 191 QLHGYDFKADIWSFGITALELAHGHAPF 218
Y D+WS G EL G F
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 82/172 (47%), Gaps = 14/172 (8%)
Query: 66 MRVTNHPNVLR--AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLL--- 120
M+ +HPNVL C + G L VV+PYM G + +++ P + L+
Sbjct: 85 MKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNET----HNPTVKDLIGFG 139
Query: 121 RETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGT 180
+ K + +L +HRD+ A N ++D +K+ADFG++ M+D T
Sbjct: 140 LQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL 199
Query: 181 PC-WMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTL 231
P WMA E +Q + K+D+WSFG+ EL AP YP + +T+
Sbjct: 200 PVKWMALESLQT-QKFTTKSDVWSFGVLLWELMTRGAP--PYPDVNTFDITV 248
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 96/208 (46%), Gaps = 23/208 (11%)
Query: 22 VGEGVSATVYRALCIPLNEIVAIK-VLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAHCS 80
+G G VY+A E+VAIK VL ++ N RE+Q MR +H N++R
Sbjct: 29 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNIVRLRYF 82
Query: 81 FTTGH------CLWVVMPYMAGGSCLHIMKSAYPEGFEE-PVIATLLR--ETLKALVYLH 131
F + L +V+ Y+ ++ + Y + PVI L + ++L Y+H
Sbjct: 83 FYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 140
Query: 132 FHGHIHRDVKAGNILIDSNGAI-KLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
G HRD+K N+L+D + A+ KL DFG SA G+ S + + + APE++
Sbjct: 141 SFGICHRDIKPQNLLLDPDTAVLKLCDFG-SAKQLVRGEPNVSX---ICSRYYRAPELIF 196
Query: 191 QLHGYDFKADIWSFGITALELAHGHAPF 218
Y D+WS G EL G F
Sbjct: 197 GATDYTSSIDVWSAGCVLAELLLGQPIF 224
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 99/221 (44%), Gaps = 25/221 (11%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLE-------KCNNDLDGIRREVQTMR 67
+++ + +G G TVY+ L IP E V I V E K N + I E M
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE---ILDEAYVMA 73
Query: 68 VTNHPNVLR--AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
++P+V R C +T + +MP+ CL + + + + K
Sbjct: 74 SVDNPHVCRLLGICLTSTVQLIMQLMPF----GCLLDYVREHKDNIGSQYLLNWCVQIAK 129
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVG-TPC-W 183
+ YL +HRD+ A N+L+ + +K+ DFG++ + G ++ + G P W
Sbjct: 130 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL---GAEEKEYHAEGGKVPIKW 186
Query: 184 MAPEVMQQLHG-YDFKADIWSFGITALEL-AHGHAPFSKYP 222
MA E + LH Y ++D+WS+G+T EL G P+ P
Sbjct: 187 MALESI--LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 225
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 99/221 (44%), Gaps = 25/221 (11%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLE-------KCNNDLDGIRREVQTMR 67
+++ + +G G TVY+ L IP E V I V E K N + I E M
Sbjct: 41 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE---ILDEAYVMA 97
Query: 68 VTNHPNVLR--AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
++P+V R C +T + +MP+ CL + + + + K
Sbjct: 98 SVDNPHVCRLLGICLTSTVQLITQLMPF----GCLLDYVREHKDNIGSQYLLNWCVQIAK 153
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVG-TPC-W 183
+ YL +HRD+ A N+L+ + +K+ DFG++ + G ++ + G P W
Sbjct: 154 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL---GAEEKEYHAEGGKVPIKW 210
Query: 184 MAPEVMQQLHG-YDFKADIWSFGITALEL-AHGHAPFSKYP 222
MA E + LH Y ++D+WS+G+T EL G P+ P
Sbjct: 211 MALESI--LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 249
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 96/208 (46%), Gaps = 23/208 (11%)
Query: 22 VGEGVSATVYRALCIPLNEIVAIK-VLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAHCS 80
+G G VY+A E+VAIK VL ++ N RE+Q MR +H N++R
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNIVRLRYF 81
Query: 81 FTTGH------CLWVVMPYMAGGSCLHIMKSAYPEGFEE-PVIATLLR--ETLKALVYLH 131
F + L +V+ Y+ ++ + Y + PVI L + ++L Y+H
Sbjct: 82 FYSSGEKKDVVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 132 FHGHIHRDVKAGNILIDSNGAI-KLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
G HRD+K N+L+D + A+ KL DFG SA G+ S + + + APE++
Sbjct: 140 SFGICHRDIKPQNLLLDPDTAVLKLCDFG-SAKQLVRGEPNVSX---ICSRYYRAPELIF 195
Query: 191 QLHGYDFKADIWSFGITALELAHGHAPF 218
Y D+WS G EL G F
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 99/221 (44%), Gaps = 25/221 (11%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLE-------KCNNDLDGIRREVQTMR 67
+++ + +G G TVY+ L IP E V I V E K N + I E M
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE---ILDEAYVMA 75
Query: 68 VTNHPNVLR--AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
++P+V R C +T + +MP+ CL + + + + K
Sbjct: 76 SVDNPHVCRLLGICLTSTVQLIMQLMPF----GCLLDYVREHKDNIGSQYLLNWCVQIAK 131
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVG-TPC-W 183
+ YL +HRD+ A N+L+ + +K+ DFG++ + G ++ + G P W
Sbjct: 132 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL---GAEEKEYHAEGGKVPIKW 188
Query: 184 MAPEVMQQLHG-YDFKADIWSFGITALEL-AHGHAPFSKYP 222
MA E + LH Y ++D+WS+G+T EL G P+ P
Sbjct: 189 MALESI--LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 227
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 82/172 (47%), Gaps = 14/172 (8%)
Query: 66 MRVTNHPNVLR--AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLL--- 120
M+ +HPNVL C + G L VV+PYM G + +++ P + L+
Sbjct: 90 MKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNET----HNPTVKDLIGFG 144
Query: 121 RETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGT 180
+ K + +L +HRD+ A N ++D +K+ADFG++ M+D T
Sbjct: 145 LQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL 204
Query: 181 PC-WMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTL 231
P WMA E +Q + K+D+WSFG+ EL AP YP + +T+
Sbjct: 205 PVKWMALESLQT-QKFTTKSDVWSFGVLLWELMTRGAP--PYPDVNTFDITV 253
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 103/255 (40%), Gaps = 40/255 (15%)
Query: 61 REVQTMRVTNHPNVLRAHCSFTTGHCL-----WVVMPYMAGGSCLHIMKSAYPEGFEEPV 115
RE++ ++ H NV+ FT L ++ ++ G +I+K + +
Sbjct: 72 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDH 128
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
+ L+ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ D
Sbjct: 129 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDD------EMT 182
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 234
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 183 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 242
Query: 235 PPG------LDYERDKRFSKSFKE-------------------LVTACLVKDPKKRPTAE 269
PG + E + + +S + L+ LV D KR TA
Sbjct: 243 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 302
Query: 270 KLMKHHFFKHARSND 284
+ + H +F D
Sbjct: 303 QALAHAYFAQYHDPD 317
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 99/221 (44%), Gaps = 25/221 (11%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLE-------KCNNDLDGIRREVQTMR 67
+++ + +G G TVY+ L IP E V I V E K N + I E M
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE---ILDEAYVMA 82
Query: 68 VTNHPNVLR--AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
++P+V R C +T + +MP+ CL + + + + K
Sbjct: 83 SVDNPHVCRLLGICLTSTVQLITQLMPF----GCLLDYVREHKDNIGSQYLLNWCVQIAK 138
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVG-TPC-W 183
+ YL +HRD+ A N+L+ + +K+ DFG++ + G ++ + G P W
Sbjct: 139 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL---GAEEKEYHAEGGKVPIKW 195
Query: 184 MAPEVMQQLHG-YDFKADIWSFGITALEL-AHGHAPFSKYP 222
MA E + LH Y ++D+WS+G+T EL G P+ P
Sbjct: 196 MALESI--LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 234
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 109/242 (45%), Gaps = 27/242 (11%)
Query: 42 VAIKVLDLEKCNN-DLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCL----------WVV 90
VA+K + L+ + +++ E M+ +HPNV+R G C+ V+
Sbjct: 65 VAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIR-----LLGVCIEMSSQGIPKPMVI 119
Query: 91 MPYMAGGSC-LHIMKSAYPEGFEEPVIATLLR---ETLKALVYLHFHGHIHRDVKAGNIL 146
+P+M G +++ S G + + TLL+ + + YL +HRD+ A N +
Sbjct: 120 LPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCM 179
Query: 147 IDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGI 206
+ + + +ADFG+S ++ +GD R W+A E + Y K+D+W+FG+
Sbjct: 180 LRDDMTVCVADFGLSKKIY-SGDYYRQGRIAKMPVKWIAIESLAD-RVYTSKSDVWAFGV 237
Query: 207 TALELA-HGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKR 265
T E+A G P+ ++ L G ++ + E++ +C DP R
Sbjct: 238 TMWEIATRGMTPYPGVQNHEMYDYLLH----GHRLKQPEDCLDELYEIMYSCWRTDPLDR 293
Query: 266 PT 267
PT
Sbjct: 294 PT 295
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 99/221 (44%), Gaps = 25/221 (11%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLE-------KCNNDLDGIRREVQTMR 67
+++ + +G G TVY+ L IP E V I V E K N + I E M
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE---ILDEAYVMA 72
Query: 68 VTNHPNVLR--AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
++P+V R C +T + +MP+ CL + + + + K
Sbjct: 73 SVDNPHVCRLLGICLTSTVQLIMQLMPF----GCLLDYVREHKDNIGSQYLLNWCVQIAK 128
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVG-TPC-W 183
+ YL +HRD+ A N+L+ + +K+ DFG++ + G ++ + G P W
Sbjct: 129 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL---GAEEKEYHAEGGKVPIKW 185
Query: 184 MAPEVMQQLHG-YDFKADIWSFGITALEL-AHGHAPFSKYP 222
MA E + LH Y ++D+WS+G+T EL G P+ P
Sbjct: 186 MALESI--LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 224
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 99/221 (44%), Gaps = 25/221 (11%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLE-------KCNNDLDGIRREVQTMR 67
+++ + +G G TVY+ L IP E V I V E K N + I E M
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE---ILDEAYVMA 75
Query: 68 VTNHPNVLR--AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
++P+V R C +T + +MP+ CL + + + + K
Sbjct: 76 SVDNPHVCRLLGICLTSTVQLITQLMPF----GCLLDYVREHKDNIGSQYLLNWCVQIAK 131
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVG-TPC-W 183
+ YL +HRD+ A N+L+ + +K+ DFG++ + G ++ + G P W
Sbjct: 132 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL---GAEEKEYHAEGGKVPIKW 188
Query: 184 MAPEVMQQLHG-YDFKADIWSFGITALEL-AHGHAPFSKYP 222
MA E + LH Y ++D+WS+G+T EL G P+ P
Sbjct: 189 MALESI--LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 227
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 99/221 (44%), Gaps = 25/221 (11%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLE-------KCNNDLDGIRREVQTMR 67
+++ + +G G TVY+ L IP E V I V E K N + I E M
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE---ILDEAYVMA 74
Query: 68 VTNHPNVLR--AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
++P+V R C +T + +MP+ CL + + + + K
Sbjct: 75 SVDNPHVCRLLGICLTSTVQLITQLMPF----GCLLDYVREHKDNIGSQYLLNWCVQIAK 130
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVG-TPC-W 183
+ YL +HRD+ A N+L+ + +K+ DFG++ + G ++ + G P W
Sbjct: 131 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL---GAEEKEYHAEGGKVPIKW 187
Query: 184 MAPEVMQQLHG-YDFKADIWSFGITALEL-AHGHAPFSKYP 222
MA E + LH Y ++D+WS+G+T EL G P+ P
Sbjct: 188 MALESI--LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 226
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 99/221 (44%), Gaps = 25/221 (11%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLE-------KCNNDLDGIRREVQTMR 67
+++ + +G G TVY+ L IP E V I V E K N + I E M
Sbjct: 22 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE---ILDEAYVMA 78
Query: 68 VTNHPNVLR--AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
++P+V R C +T + +MP+ CL + + + + K
Sbjct: 79 SVDNPHVCRLLGICLTSTVQLITQLMPF----GCLLDYVREHKDNIGSQYLLNWCVQIAK 134
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVG-TPC-W 183
+ YL +HRD+ A N+L+ + +K+ DFG++ + G ++ + G P W
Sbjct: 135 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL---GAEEKEYHAEGGKVPIKW 191
Query: 184 MAPEVMQQLHG-YDFKADIWSFGITALEL-AHGHAPFSKYP 222
MA E + LH Y ++D+WS+G+T EL G P+ P
Sbjct: 192 MALESI--LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 230
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 92/200 (46%), Gaps = 14/200 (7%)
Query: 87 LWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNIL 146
L++V YMA GS + ++S + + +A+ YL + +HRD+ A N+L
Sbjct: 262 LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVL 321
Query: 147 IDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGI 206
+ + K++DFG++ +A Q + V W APE +++ + K+D+WSFGI
Sbjct: 322 VSEDNVAKVSDFGLTK---EASSTQDTGKLPVK---WTAPEALRE-KKFSTKSDVWSFGI 374
Query: 207 TALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKR 265
E+ + G P+ + P V + G + + +++ C D R
Sbjct: 375 LLWEIYSFGRVPYPRIPLKDV----VPRVEKGYKMDAPDGCPPAVYDVMKNCWHLDAATR 430
Query: 266 PTAEKLMKHHFFKHARSNDF 285
PT +L + +H R+++
Sbjct: 431 PTFLQLREQ--LEHIRTHEL 448
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 99/221 (44%), Gaps = 25/221 (11%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLE-------KCNNDLDGIRREVQTMR 67
+++ + +G G TVY+ L IP E V I V E K N + I E M
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE---ILDEAYVMA 75
Query: 68 VTNHPNVLR--AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
++P+V R C +T + +MP+ CL + + + + K
Sbjct: 76 SVDNPHVCRLLGICLTSTVQLITQLMPF----GCLLDYVREHKDNIGSQYLLNWCVQIAK 131
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVG-TPC-W 183
+ YL +HRD+ A N+L+ + +K+ DFG++ + G ++ + G P W
Sbjct: 132 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL---GAEEKEYHAEGGKVPIKW 188
Query: 184 MAPEVMQQLHG-YDFKADIWSFGITALEL-AHGHAPFSKYP 222
MA E + LH Y ++D+WS+G+T EL G P+ P
Sbjct: 189 MALESI--LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 227
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 103/255 (40%), Gaps = 40/255 (15%)
Query: 61 REVQTMRVTNHPNVLRAHCSFTTGHCL-----WVVMPYMAGGSCLHIMKSAYPEGFEEPV 115
RE++ ++ H NV+ FT L ++ ++ G +I+K + +
Sbjct: 76 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDH 132
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
+ L+ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ D
Sbjct: 133 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDD------EMT 186
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 234
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 187 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 246
Query: 235 PPG------LDYERDKRFSKSFKE-------------------LVTACLVKDPKKRPTAE 269
PG + E + + +S + L+ LV D KR TA
Sbjct: 247 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 306
Query: 270 KLMKHHFFKHARSND 284
+ + H +F D
Sbjct: 307 QALAHAYFAQYHDPD 321
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 116/279 (41%), Gaps = 20/279 (7%)
Query: 3 LVVEKRFPVDAKDYRLYEEVGEGVSATVYR--ALCIPLNEI---VAIKVLDLEKCNNDLD 57
+ V + V + L E+G+G VY A I E VA+K ++ +
Sbjct: 6 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 58 GIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPE-----GFE 112
E M+ +V+R + G VVM MA G ++S PE G
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 113 EPVIATLLR---ETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGD 169
P + +++ E + YL+ +HRD+ A N ++ + +K+ DFG++ +++ D
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYET-D 184
Query: 170 RQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAH-GHAPFSKYPPMKVLL 228
R + WMAPE ++ + +D+WSFG+ E+ P+ +VL
Sbjct: 185 YYRKGGKGLLPVRWMAPESLKD-GVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLK 243
Query: 229 MTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPT 267
+ G ++ + +L+ C +PK RPT
Sbjct: 244 FVMD----GGYLDQPDNCPERVTDLMRMCWQFNPKMRPT 278
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 96/219 (43%), Gaps = 21/219 (9%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLE-------KCNNDLDGIRREVQTMR 67
+++ + +G G TVY+ L IP E V I V E K N + I E M
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE---ILDEAYVMA 74
Query: 68 VTNHPNVLR--AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
++P+V R C +T + +MP+ CL + + + + K
Sbjct: 75 SVDNPHVCRLLGICLTSTVQLIMQLMPF----GCLLDYVREHKDNIGSQYLLNWCVQIAK 130
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
+ YL +HRD+ A N+L+ + +K+ DFG A + A +++ WMA
Sbjct: 131 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG-RAKLLGAEEKEYHAEGGKVPIKWMA 189
Query: 186 PEVMQQLHG-YDFKADIWSFGITALEL-AHGHAPFSKYP 222
E + LH Y ++D+WS+G+T EL G P+ P
Sbjct: 190 LESI--LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 226
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 96/219 (43%), Gaps = 21/219 (9%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLE-------KCNNDLDGIRREVQTMR 67
+++ + +G G TVY+ L IP E V I V E K N + I E M
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE---ILDEAYVMA 74
Query: 68 VTNHPNVLR--AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
++P+V R C +T + +MP+ CL + + + + K
Sbjct: 75 SVDNPHVCRLLGICLTSTVQLIMQLMPF----GCLLDYVREHKDNIGSQYLLNWCVQIAK 130
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
+ YL +HRD+ A N+L+ + +K+ DFG A + A +++ WMA
Sbjct: 131 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG-RAKLLGAEEKEYHAEGGKVPIKWMA 189
Query: 186 PEVMQQLHG-YDFKADIWSFGITALEL-AHGHAPFSKYP 222
E + LH Y ++D+WS+G+T EL G P+ P
Sbjct: 190 LESI--LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 226
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 99/221 (44%), Gaps = 25/221 (11%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLE-------KCNNDLDGIRREVQTMR 67
+++ + +G G TVY+ L IP E V I V E K N + I E M
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE---ILDEAYVMA 75
Query: 68 VTNHPNVLR--AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
++P+V R C +T + +MP+ CL + + + + K
Sbjct: 76 SVDNPHVCRLLGICLTSTVQLITQLMPF----GCLLDYVREHKDNIGSQYLLNWCVQIAK 131
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVG-TPC-W 183
+ YL +HRD+ A N+L+ + +K+ DFG++ + G ++ + G P W
Sbjct: 132 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL---GAEEKEYHAEGGKVPIKW 188
Query: 184 MAPEVMQQLHG-YDFKADIWSFGITALEL-AHGHAPFSKYP 222
MA E + LH Y ++D+WS+G+T EL G P+ P
Sbjct: 189 MALESI--LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 227
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 105/257 (40%), Gaps = 44/257 (17%)
Query: 61 REVQTMRVTNHPNVLRAHCSFTTGHCL-----WVVMPYMAGGSCLHIMKSAYPEGFEEPV 115
RE++ ++ H NV+ FT L ++ ++ G +I+K + +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDH 126
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFD--AGDRQRS 173
+ L+ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ D AG
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAG----- 181
Query: 174 RNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ- 232
FV T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 182 ---FVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 238
Query: 233 NAPPG------LDYERDKRFSKSFKE-------------------LVTACLVKDPKKRPT 267
PG + E + + +S + L+ LV D KR T
Sbjct: 239 VGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRIT 298
Query: 268 AEKLMKHHFFKHARSND 284
A + + H +F D
Sbjct: 299 AAQALAHAYFAQYHDPD 315
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 99/221 (44%), Gaps = 25/221 (11%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLE-------KCNNDLDGIRREVQTMR 67
+++ + +G G TVY+ L IP E V I V E K N + I E M
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE---ILDEAYVMA 79
Query: 68 VTNHPNVLR--AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
++P+V R C +T + +MP+ CL + + + + K
Sbjct: 80 SVDNPHVCRLLGICLTSTVQLITQLMPF----GCLLDYVREHKDNIGSQYLLNWCVQIAK 135
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVG-TPC-W 183
+ YL +HRD+ A N+L+ + +K+ DFG++ + G ++ + G P W
Sbjct: 136 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL---GAEEKEYHAEGGKVPIKW 192
Query: 184 MAPEVMQQLHG-YDFKADIWSFGITALEL-AHGHAPFSKYP 222
MA E + LH Y ++D+WS+G+T EL G P+ P
Sbjct: 193 MALESI--LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 231
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 103/255 (40%), Gaps = 40/255 (15%)
Query: 61 REVQTMRVTNHPNVLRAHCSFTTGHCL-----WVVMPYMAGGSCLHIMKSAYPEGFEEPV 115
RE++ ++ H NV+ FT L ++ ++ G +I+K + +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKX---QKLTDDH 126
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
+ L+ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ D
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDD------EMT 180
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 234
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 235 PPG------LDYERDKRFSKSFKE-------------------LVTACLVKDPKKRPTAE 269
PG + E + + +S + L+ LV D KR TA
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 270 KLMKHHFFKHARSND 284
+ + H +F D
Sbjct: 301 QALAHAYFAQYHDPD 315
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 99/221 (44%), Gaps = 25/221 (11%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLE-------KCNNDLDGIRREVQTMR 67
+++ + +G G TVY+ L IP E V I V E K N + I E M
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE---ILDEAYVMA 72
Query: 68 VTNHPNVLR--AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
++P+V R C +T + +MP+ CL + + + + K
Sbjct: 73 SVDNPHVCRLLGICLTSTVQLITQLMPF----GCLLDYVREHKDNIGSQYLLNWCVQIAK 128
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVG-TPC-W 183
+ YL +HRD+ A N+L+ + +K+ DFG++ + G ++ + G P W
Sbjct: 129 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL---GAEEKEYHAEGGKVPIKW 185
Query: 184 MAPEVMQQLHG-YDFKADIWSFGITALEL-AHGHAPFSKYP 222
MA E + LH Y ++D+WS+G+T EL G P+ P
Sbjct: 186 MALESI--LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 224
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 103/255 (40%), Gaps = 40/255 (15%)
Query: 61 REVQTMRVTNHPNVLRAHCSFTTGHCL-----WVVMPYMAGGSCLHIMKSAYPEGFEEPV 115
RE++ ++ H NV+ FT L ++ ++ G +I+K + +
Sbjct: 77 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDH 133
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
+ L+ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ D
Sbjct: 134 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD------EMT 187
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 234
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 188 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 247
Query: 235 PPG------LDYERDKRFSKSFKE-------------------LVTACLVKDPKKRPTAE 269
PG + E + + +S + L+ LV D KR TA
Sbjct: 248 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 307
Query: 270 KLMKHHFFKHARSND 284
+ + H +F D
Sbjct: 308 QALAHAYFAQYHDPD 322
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 105/257 (40%), Gaps = 44/257 (17%)
Query: 61 REVQTMRVTNHPNVLRAHCSFTTGHCL-----WVVMPYMAGGSCLHIMKSAYPEGFEEPV 115
RE++ ++ H NV+ FT L ++ ++ G +I+K + +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDH 126
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFD--AGDRQRS 173
+ L+ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ D AG
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAG----- 181
Query: 174 RNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ- 232
FV T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 182 ---FVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 238
Query: 233 NAPPG------LDYERDKRFSKSFKE-------------------LVTACLVKDPKKRPT 267
PG + E + + +S + L+ LV D KR T
Sbjct: 239 VGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRIT 298
Query: 268 AEKLMKHHFFKHARSND 284
A + + H +F D
Sbjct: 299 AAQALAHAYFAQYHDPD 315
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 103/255 (40%), Gaps = 40/255 (15%)
Query: 61 REVQTMRVTNHPNVLRAHCSFTTGHCL-----WVVMPYMAGGSCLHIMKSAYPEGFEEPV 115
RE++ ++ H NV+ FT L ++ ++ G +I+K + +
Sbjct: 77 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDH 133
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
+ L+ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ D
Sbjct: 134 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD------EMT 187
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 234
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 188 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 247
Query: 235 PPG------LDYERDKRFSKSFKE-------------------LVTACLVKDPKKRPTAE 269
PG + E + + +S + L+ LV D KR TA
Sbjct: 248 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 307
Query: 270 KLMKHHFFKHARSND 284
+ + H +F D
Sbjct: 308 QALAHAYFAQYHDPD 322
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 81/172 (47%), Gaps = 14/172 (8%)
Query: 66 MRVTNHPNVLR--AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLL--- 120
M+ +HPNVL C + G L VV+PYM G + +++ P + L+
Sbjct: 86 MKDFSHPNVLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIRNET----HNPTVKDLIGFG 140
Query: 121 RETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGT 180
+ K + +L +HRD+ A N ++D +K+ADFG++ M D T
Sbjct: 141 LQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKL 200
Query: 181 PC-WMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTL 231
P WMA E +Q + K+D+WSFG+ EL AP YP + +T+
Sbjct: 201 PVKWMALESLQT-QKFTTKSDVWSFGVLLWELMTRGAP--PYPDVNTFDITV 249
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 113/271 (41%), Gaps = 20/271 (7%)
Query: 11 VDAKDYRLYEEVGEGVSATVYR--ALCIPLNEI---VAIKVLDLEKCNNDLDGIRREVQT 65
V + L E+G+G VY A I E VA+K ++ + E
Sbjct: 13 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASV 72
Query: 66 MRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPE-----GFEEPVIATLL 120
M+ +V+R + G VVM MA G ++S PE G P + ++
Sbjct: 73 MKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMI 132
Query: 121 R---ETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTF 177
+ E + YL+ +HRD+ A N ++ + +K+ DFG++ +++ D R
Sbjct: 133 QMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYET-DYYRKGGKG 191
Query: 178 VGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAH-GHAPFSKYPPMKVLLMTLQNAPP 236
+ WMAPE ++ + +D+WSFG+ E+ P+ +VL +
Sbjct: 192 LLPVRWMAPESLKD-GVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMD---- 246
Query: 237 GLDYERDKRFSKSFKELVTACLVKDPKKRPT 267
G ++ + +L+ C +PK RPT
Sbjct: 247 GGYLDQPDNCPERVTDLMRMCWQFNPKMRPT 277
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 96/208 (46%), Gaps = 23/208 (11%)
Query: 22 VGEGVSATVYRALCIPLNEIVAIK-VLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAHCS 80
+G G VY+A E+VAIK VL + N RE+Q MR +H N++R
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN------RELQIMRKLDHCNIVRLRYF 81
Query: 81 FTTGH------CLWVVMPYMAGGSCLHIMKSAYPEGFEE-PVIATLLR--ETLKALVYLH 131
F + L +V+ Y+ + ++ + Y + PVI L + ++L Y+H
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVP--ATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 132 FHGHIHRDVKAGNILIDSNGAI-KLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQ 190
G HRD+K N+L+D + A+ KL DFG SA G+ S + + + APE++
Sbjct: 140 SFGICHRDIKPQNLLLDPDTAVLKLCDFG-SAKQLVRGEPNVSX---ICSRYYRAPELIF 195
Query: 191 QLHGYDFKADIWSFGITALELAHGHAPF 218
Y D+WS G EL G F
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 103/255 (40%), Gaps = 40/255 (15%)
Query: 61 REVQTMRVTNHPNVLRAHCSFTTGHCL-----WVVMPYMAGGSCLHIMKSAYPEGFEEPV 115
RE++ ++ H NV+ FT L ++ ++ G +I+K + +
Sbjct: 81 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDH 137
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
+ L+ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ D
Sbjct: 138 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDD------EMT 191
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 234
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 192 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 251
Query: 235 PPG------LDYERDKRFSKSFKE-------------------LVTACLVKDPKKRPTAE 269
PG + E + + +S + L+ LV D KR TA
Sbjct: 252 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 311
Query: 270 KLMKHHFFKHARSND 284
+ + H +F D
Sbjct: 312 QALAHAYFAQYHDPD 326
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 103/255 (40%), Gaps = 40/255 (15%)
Query: 61 REVQTMRVTNHPNVLRAHCSFTTGHCL-----WVVMPYMAGGSCLHIMKSAYPEGFEEPV 115
RE++ ++ H NV+ FT L ++ ++ G +I+K + +
Sbjct: 75 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDH 131
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
+ L+ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ D
Sbjct: 132 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDD------EMT 185
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 234
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 186 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 245
Query: 235 PPG------LDYERDKRFSKSFKE-------------------LVTACLVKDPKKRPTAE 269
PG + E + + +S + L+ LV D KR TA
Sbjct: 246 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 305
Query: 270 KLMKHHFFKHARSND 284
+ + H +F D
Sbjct: 306 QALAHAYFAQYHDPD 320
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 103/255 (40%), Gaps = 40/255 (15%)
Query: 61 REVQTMRVTNHPNVLRAHCSFTTGHCL-----WVVMPYMAGGSCLHIMKSAYPEGFEEPV 115
RE++ ++ H NV+ FT L ++ ++ G +I+K + +
Sbjct: 75 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDH 131
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
+ L+ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ D
Sbjct: 132 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDD------EMT 185
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 234
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 186 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 245
Query: 235 PPG------LDYERDKRFSKSFKE-------------------LVTACLVKDPKKRPTAE 269
PG + E + + +S + L+ LV D KR TA
Sbjct: 246 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 305
Query: 270 KLMKHHFFKHARSND 284
+ + H +F D
Sbjct: 306 QALAHAYFAQYHDPD 320
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 103/255 (40%), Gaps = 40/255 (15%)
Query: 61 REVQTMRVTNHPNVLRAHCSFTTGHCL-----WVVMPYMAGGSCLHIMKSAYPEGFEEPV 115
RE++ ++ H NV+ FT L ++ ++ G +I+K + +
Sbjct: 77 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDH 133
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
+ L+ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ D
Sbjct: 134 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD------EMT 187
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 234
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 188 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 247
Query: 235 PPG------LDYERDKRFSKSFKE-------------------LVTACLVKDPKKRPTAE 269
PG + E + + +S + L+ LV D KR TA
Sbjct: 248 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 307
Query: 270 KLMKHHFFKHARSND 284
+ + H +F D
Sbjct: 308 QALAHAYFAQYHDPD 322
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 96/219 (43%), Gaps = 21/219 (9%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLE-------KCNNDLDGIRREVQTMR 67
+++ + +G G TVY+ L IP E V I V E K N + I E M
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE---ILDEAYVMA 74
Query: 68 VTNHPNVLR--AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
++P+V R C +T + +MP+ CL + + + + K
Sbjct: 75 SVDNPHVCRLLGICLTSTVQLITQLMPF----GCLLDYVREHKDNIGSQYLLNWCVQIAK 130
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
+ YL +HRD+ A N+L+ + +K+ DFG A + A +++ WMA
Sbjct: 131 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG-RAKLLGAEEKEYHAEGGKVPIKWMA 189
Query: 186 PEVMQQLHG-YDFKADIWSFGITALEL-AHGHAPFSKYP 222
E + LH Y ++D+WS+G+T EL G P+ P
Sbjct: 190 LESI--LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 226
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 103/255 (40%), Gaps = 40/255 (15%)
Query: 61 REVQTMRVTNHPNVLRAHCSFTTGHCL-----WVVMPYMAGGSCLHIMKSAYPEGFEEPV 115
RE++ ++ H NV+ FT L ++ ++ G +I+K + +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDH 126
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
+ L+ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ D
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------EMT 180
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 234
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 235 PPG------LDYERDKRFSKSFKE-------------------LVTACLVKDPKKRPTAE 269
PG + E + + +S + L+ LV D KR TA
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 270 KLMKHHFFKHARSND 284
+ + H +F D
Sbjct: 301 QALAHAYFAQYHDPD 315
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 105/246 (42%), Gaps = 21/246 (8%)
Query: 42 VAIKVLDLEKCNNDLDGIRREVQTM-RVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL 100
VA+K+L ++ + + E++ M + H N++ + T G + V+ Y G L
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 138
Query: 101 HIMKSAYPEGFEEPV--------------IATLLRETLKALVYLHFHGHIHRDVKAGNIL 146
+ ++ P G E + + + + +L IHRDV A N+L
Sbjct: 139 NFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVL 198
Query: 147 IDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGI 206
+ + K+ DFG++ + + + N + WMAPE + Y ++D+WS+GI
Sbjct: 199 LTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK-WMAPESIFDC-VYTVQSDVWSYGI 256
Query: 207 TALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKR 265
E+ + G P YP + V + G + K+ ++ AC +P R
Sbjct: 257 LLWEIFSLGLNP---YPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHR 313
Query: 266 PTAEKL 271
PT +++
Sbjct: 314 PTFQQI 319
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 96/219 (43%), Gaps = 21/219 (9%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLE-------KCNNDLDGIRREVQTMR 67
+++ + +G G TVY+ L IP E V I V E K N + I E M
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE---ILDEAYVMA 76
Query: 68 VTNHPNVLR--AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
++P+V R C +T + +MP+ CL + + + + K
Sbjct: 77 SVDNPHVCRLLGICLTSTVQLIMQLMPF----GCLLDYVREHKDNIGSQYLLNWCVQIAK 132
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
+ YL +HRD+ A N+L+ + +K+ DFG A + A +++ WMA
Sbjct: 133 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG-RAKLLGAEEKEYHAEGGKVPIKWMA 191
Query: 186 PEVMQQLHG-YDFKADIWSFGITALEL-AHGHAPFSKYP 222
E + LH Y ++D+WS+G+T EL G P+ P
Sbjct: 192 LESI--LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 228
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 103/255 (40%), Gaps = 40/255 (15%)
Query: 61 REVQTMRVTNHPNVLRAHCSFTTGHCL-----WVVMPYMAGGSCLHIMKSAYPEGFEEPV 115
RE++ ++ H NV+ FT L ++ ++ G +I+K + +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDH 126
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
+ L+ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ D
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------EMT 180
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 234
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 235 PPG------LDYERDKRFSKSFKE-------------------LVTACLVKDPKKRPTAE 269
PG + E + + +S + L+ LV D KR TA
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 270 KLMKHHFFKHARSND 284
+ + H +F D
Sbjct: 301 QALAHAYFAQYHDPD 315
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 103/255 (40%), Gaps = 40/255 (15%)
Query: 61 REVQTMRVTNHPNVLRAHCSFTTGHCL-----WVVMPYMAGGSCLHIMKSAYPEGFEEPV 115
RE++ ++ H NV+ FT L ++ ++ G +I+K + +
Sbjct: 72 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDH 128
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
+ L+ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ D
Sbjct: 129 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------EMT 182
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 234
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 183 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 242
Query: 235 PPG------LDYERDKRFSKSFKE-------------------LVTACLVKDPKKRPTAE 269
PG + E + + +S + L+ LV D KR TA
Sbjct: 243 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 302
Query: 270 KLMKHHFFKHARSND 284
+ + H +F D
Sbjct: 303 QALAHAYFAQYHDPD 317
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 103/255 (40%), Gaps = 40/255 (15%)
Query: 61 REVQTMRVTNHPNVLRAHCSFTTGHCL-----WVVMPYMAGGSCLHIMKSAYPEGFEEPV 115
RE++ ++ H NV+ FT L ++ ++ G +I+K + +
Sbjct: 93 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDH 149
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
+ L+ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ D
Sbjct: 150 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------EMX 203
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 234
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 204 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 263
Query: 235 PPG------LDYERDKRFSKSFKE-------------------LVTACLVKDPKKRPTAE 269
PG + E + + +S + L+ LV D KR TA
Sbjct: 264 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 323
Query: 270 KLMKHHFFKHARSND 284
+ + H +F D
Sbjct: 324 QALAHAYFAQYHDPD 338
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 96/219 (43%), Gaps = 21/219 (9%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLE-------KCNNDLDGIRREVQTMR 67
+++ + +G G TVY+ L IP E V I V E K N + I E M
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE---ILDEAYVMA 79
Query: 68 VTNHPNVLR--AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
++P+V R C +T + +MP+ CL + + + + K
Sbjct: 80 SVDNPHVCRLLGICLTSTVQLITQLMPF----GCLLDYVREHKDNIGSQYLLNWCVQIAK 135
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
+ YL +HRD+ A N+L+ + +K+ DFG A + A +++ WMA
Sbjct: 136 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG-RAKLLGAEEKEYHAEGGKVPIKWMA 194
Query: 186 PEVMQQLHG-YDFKADIWSFGITALEL-AHGHAPFSKYP 222
E + LH Y ++D+WS+G+T EL G P+ P
Sbjct: 195 LESI--LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 231
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 103/255 (40%), Gaps = 40/255 (15%)
Query: 61 REVQTMRVTNHPNVLRAHCSFTTGHCL-----WVVMPYMAGGSCLHIMKSAYPEGFEEPV 115
RE++ ++ H NV+ FT L ++ ++ G +I+K + +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKX---QKLTDDH 126
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
+ L+ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ D
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------EMT 180
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 234
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 235 PPG------LDYERDKRFSKSFKE-------------------LVTACLVKDPKKRPTAE 269
PG + E + + +S + L+ LV D KR TA
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 270 KLMKHHFFKHARSND 284
+ + H +F D
Sbjct: 301 QALAHAYFAQYHDPD 315
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 103/255 (40%), Gaps = 40/255 (15%)
Query: 61 REVQTMRVTNHPNVLRAHCSFTTGHCL-----WVVMPYMAGGSCLHIMKSAYPEGFEEPV 115
RE++ ++ H NV+ FT L ++ ++ G +I+K + +
Sbjct: 82 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDH 138
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
+ L+ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ D
Sbjct: 139 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------EMT 192
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 234
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 193 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 252
Query: 235 PPG------LDYERDKRFSKSFKE-------------------LVTACLVKDPKKRPTAE 269
PG + E + + +S + L+ LV D KR TA
Sbjct: 253 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 312
Query: 270 KLMKHHFFKHARSND 284
+ + H +F D
Sbjct: 313 QALAHAYFAQYHDPD 327
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 103/255 (40%), Gaps = 40/255 (15%)
Query: 61 REVQTMRVTNHPNVLRAHCSFTTGHCL-----WVVMPYMAGGSCLHIMKSAYPEGFEEPV 115
RE++ ++ H NV+ FT L ++ ++ G +I+K + +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDH 126
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
+ L+ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ D
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------EMT 180
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 234
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 235 PPG------LDYERDKRFSKSFKE-------------------LVTACLVKDPKKRPTAE 269
PG + E + + +S + L+ LV D KR TA
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 270 KLMKHHFFKHARSND 284
+ + H +F D
Sbjct: 301 QALAHAYFAQYHDPD 315
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 103/255 (40%), Gaps = 40/255 (15%)
Query: 61 REVQTMRVTNHPNVLRAHCSFTTGHCL-----WVVMPYMAGGSCLHIMKSAYPEGFEEPV 115
RE++ ++ H NV+ FT L ++ ++ G +I+K + +
Sbjct: 82 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDH 138
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
+ L+ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ D
Sbjct: 139 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------EMT 192
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 234
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 193 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 252
Query: 235 PPG------LDYERDKRFSKSFKE-------------------LVTACLVKDPKKRPTAE 269
PG + E + + +S + L+ LV D KR TA
Sbjct: 253 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 312
Query: 270 KLMKHHFFKHARSND 284
+ + H +F D
Sbjct: 313 QALAHAYFAQYHDPD 327
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 103/255 (40%), Gaps = 40/255 (15%)
Query: 61 REVQTMRVTNHPNVLRAHCSFTTGHCL-----WVVMPYMAGGSCLHIMKSAYPEGFEEPV 115
RE++ ++ H NV+ FT L ++ ++ G +I+K + +
Sbjct: 82 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDH 138
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
+ L+ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ D
Sbjct: 139 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------EMT 192
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 234
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 193 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 252
Query: 235 PPG------LDYERDKRFSKSFKE-------------------LVTACLVKDPKKRPTAE 269
PG + E + + +S + L+ LV D KR TA
Sbjct: 253 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 312
Query: 270 KLMKHHFFKHARSND 284
+ + H +F D
Sbjct: 313 QALAHAYFAQYHDPD 327
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 103/255 (40%), Gaps = 40/255 (15%)
Query: 61 REVQTMRVTNHPNVLRAHCSFTTGHCL-----WVVMPYMAGGSCLHIMKSAYPEGFEEPV 115
RE++ ++ H NV+ FT L ++ ++ G +I+K + +
Sbjct: 72 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDH 128
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
+ L+ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ D
Sbjct: 129 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------EMT 182
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 234
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 183 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 242
Query: 235 PPG------LDYERDKRFSKSFKE-------------------LVTACLVKDPKKRPTAE 269
PG + E + + +S + L+ LV D KR TA
Sbjct: 243 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 302
Query: 270 KLMKHHFFKHARSND 284
+ + H +F D
Sbjct: 303 QALAHAYFAQYHDPD 317
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 103/255 (40%), Gaps = 40/255 (15%)
Query: 61 REVQTMRVTNHPNVLRAHCSFTTGHCL-----WVVMPYMAGGSCLHIMKSAYPEGFEEPV 115
RE++ ++ H NV+ FT L ++ ++ G +I+K + +
Sbjct: 75 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDH 131
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
+ L+ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ D
Sbjct: 132 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------EMT 185
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 234
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 186 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 245
Query: 235 PPG------LDYERDKRFSKSFKE-------------------LVTACLVKDPKKRPTAE 269
PG + E + + +S + L+ LV D KR TA
Sbjct: 246 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 305
Query: 270 KLMKHHFFKHARSND 284
+ + H +F D
Sbjct: 306 QALAHAYFAQYHDPD 320
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 103/255 (40%), Gaps = 40/255 (15%)
Query: 61 REVQTMRVTNHPNVLRAHCSFTTGHCL-----WVVMPYMAGGSCLHIMKSAYPEGFEEPV 115
RE++ ++ H NV+ FT L ++ ++ G +I+K + +
Sbjct: 69 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDH 125
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
+ L+ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ D
Sbjct: 126 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------EMT 179
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 234
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 180 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 239
Query: 235 PPG------LDYERDKRFSKSFKE-------------------LVTACLVKDPKKRPTAE 269
PG + E + + +S + L+ LV D KR TA
Sbjct: 240 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 299
Query: 270 KLMKHHFFKHARSND 284
+ + H +F D
Sbjct: 300 QALAHAYFAQYHDPD 314
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 103/255 (40%), Gaps = 40/255 (15%)
Query: 61 REVQTMRVTNHPNVLRAHCSFTTGHCL-----WVVMPYMAGGSCLHIMKSAYPEGFEEPV 115
RE++ ++ H NV+ FT L ++ ++ G +I+K + +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDH 126
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
+ L+ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ D
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------EMT 180
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 234
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 235 PPG------LDYERDKRFSKSFKE-------------------LVTACLVKDPKKRPTAE 269
PG + E + + +S + L+ LV D KR TA
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 270 KLMKHHFFKHARSND 284
+ + H +F D
Sbjct: 301 QALAHAYFAQYHDPD 315
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 103/255 (40%), Gaps = 40/255 (15%)
Query: 61 REVQTMRVTNHPNVLRAHCSFTTGHCL-----WVVMPYMAGGSCLHIMKSAYPEGFEEPV 115
RE++ ++ H NV+ FT L ++ ++ G +I+K + +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDH 126
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
+ L+ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ D
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------EMT 180
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 234
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 235 PPG------LDYERDKRFSKSFKE-------------------LVTACLVKDPKKRPTAE 269
PG + E + + +S + L+ LV D KR TA
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 270 KLMKHHFFKHARSND 284
+ + H +F D
Sbjct: 301 QALAHAYFAQYHDPD 315
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 103/255 (40%), Gaps = 40/255 (15%)
Query: 61 REVQTMRVTNHPNVLRAHCSFTTGHCL-----WVVMPYMAGGSCLHIMKSAYPEGFEEPV 115
RE++ ++ H NV+ FT L ++ ++ G +I+K + +
Sbjct: 77 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDH 133
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
+ L+ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ D
Sbjct: 134 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------EMT 187
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 234
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 188 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 247
Query: 235 PPG------LDYERDKRFSKSFKE-------------------LVTACLVKDPKKRPTAE 269
PG + E + + +S + L+ LV D KR TA
Sbjct: 248 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 307
Query: 270 KLMKHHFFKHARSND 284
+ + H +F D
Sbjct: 308 QALAHAYFAQYHDPD 322
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 96/219 (43%), Gaps = 21/219 (9%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLE-------KCNNDLDGIRREVQTMR 67
+++ + +G G TVY+ L IP E V I V E K N + I E M
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE---ILDEAYVMA 72
Query: 68 VTNHPNVLR--AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
++P+V R C +T + +MP+ CL + + + + K
Sbjct: 73 SVDNPHVCRLLGICLTSTVQLITQLMPF----GCLLDYVREHKDNIGSQYLLNWCVQIAK 128
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
+ YL +HRD+ A N+L+ + +K+ DFG A + A +++ WMA
Sbjct: 129 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG-RAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 186 PEVMQQLHG-YDFKADIWSFGITALEL-AHGHAPFSKYP 222
E + LH Y ++D+WS+G+T EL G P+ P
Sbjct: 188 LESI--LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 224
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 103/255 (40%), Gaps = 40/255 (15%)
Query: 61 REVQTMRVTNHPNVLRAHCSFTTGHCL-----WVVMPYMAGGSCLHIMKSAYPEGFEEPV 115
RE++ ++ H NV+ FT L ++ ++ G +I+K + +
Sbjct: 89 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDH 145
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
+ L+ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ D
Sbjct: 146 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------EMT 199
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 234
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 200 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 259
Query: 235 PPG------LDYERDKRFSKSFKE-------------------LVTACLVKDPKKRPTAE 269
PG + E + + +S + L+ LV D KR TA
Sbjct: 260 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 319
Query: 270 KLMKHHFFKHARSND 284
+ + H +F D
Sbjct: 320 QALAHAYFAQYHDPD 334
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 116/279 (41%), Gaps = 20/279 (7%)
Query: 3 LVVEKRFPVDAKDYRLYEEVGEGVSATVYR--ALCIPLNEI---VAIKVLDLEKCNNDLD 57
+ V + V + L E+G+G VY A I E VA+K ++ +
Sbjct: 6 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 58 GIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPE-----GFE 112
E M+ +V+R + G VVM MA G ++S PE G
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 113 EPVIATLLR---ETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGD 169
P + +++ E + YL+ +HRD+ A N ++ + +K+ DFG++ +++
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAY 185
Query: 170 RQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAH-GHAPFSKYPPMKVLL 228
++ + WMAPE ++ + +D+WSFG+ E+ P+ +VL
Sbjct: 186 YRKGGKGLLPVR-WMAPESLKD-GVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLK 243
Query: 229 MTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPT 267
+ G ++ + +L+ C +PK RPT
Sbjct: 244 FVMD----GGYLDQPDNCPERVTDLMRMCWQFNPKMRPT 278
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 103/255 (40%), Gaps = 40/255 (15%)
Query: 61 REVQTMRVTNHPNVLRAHCSFTTGHCL-----WVVMPYMAGGSCLHIMKSAYPEGFEEPV 115
RE++ ++ H NV+ FT L ++ ++ G +I+K + +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDH 126
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
+ L+ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ D
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------EMT 180
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 234
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 235 PPG------LDYERDKRFSKSFKE-------------------LVTACLVKDPKKRPTAE 269
PG + E + + +S + L+ LV D KR TA
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 270 KLMKHHFFKHARSND 284
+ + H +F D
Sbjct: 301 QALAHAYFAQYHDPD 315
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 103/255 (40%), Gaps = 40/255 (15%)
Query: 61 REVQTMRVTNHPNVLRAHCSFTTGHCL-----WVVMPYMAGGSCLHIMKSAYPEGFEEPV 115
RE++ ++ H NV+ FT L ++ ++ G +I+K + +
Sbjct: 76 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDH 132
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
+ L+ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ D
Sbjct: 133 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------EMT 186
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 234
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 187 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 246
Query: 235 PPG------LDYERDKRFSKSFKE-------------------LVTACLVKDPKKRPTAE 269
PG + E + + +S + L+ LV D KR TA
Sbjct: 247 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 306
Query: 270 KLMKHHFFKHARSND 284
+ + H +F D
Sbjct: 307 QALAHAYFAQYHDPD 321
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 103/255 (40%), Gaps = 40/255 (15%)
Query: 61 REVQTMRVTNHPNVLRAHCSFTTGHCL-----WVVMPYMAGGSCLHIMKSAYPEGFEEPV 115
RE++ ++ H NV+ FT L ++ ++ G +I+K + +
Sbjct: 81 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDH 137
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
+ L+ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ D
Sbjct: 138 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------EMT 191
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 234
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 192 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 251
Query: 235 PPG------LDYERDKRFSKSFKE-------------------LVTACLVKDPKKRPTAE 269
PG + E + + +S + L+ LV D KR TA
Sbjct: 252 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 311
Query: 270 KLMKHHFFKHARSND 284
+ + H +F D
Sbjct: 312 QALAHAYFAQYHDPD 326
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 103/255 (40%), Gaps = 40/255 (15%)
Query: 61 REVQTMRVTNHPNVLRAHCSFTTGHCL-----WVVMPYMAGGSCLHIMKSAYPEGFEEPV 115
RE++ ++ H NV+ FT L ++ ++ G +I+K + +
Sbjct: 93 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDH 149
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
+ L+ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ D
Sbjct: 150 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------EMT 203
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 234
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 204 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 263
Query: 235 PPG------LDYERDKRFSKSFKE-------------------LVTACLVKDPKKRPTAE 269
PG + E + + +S + L+ LV D KR TA
Sbjct: 264 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 323
Query: 270 KLMKHHFFKHARSND 284
+ + H +F D
Sbjct: 324 QALAHAYFAQYHDPD 338
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 99/221 (44%), Gaps = 25/221 (11%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLE-------KCNNDLDGIRREVQTMR 67
+++ + +G G TVY+ L IP E V I V E K N + I E M
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE---ILDEAYVMA 72
Query: 68 VTNHPNVLR--AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
++P+V R C +T + +MP+ CL + + + + K
Sbjct: 73 SVDNPHVCRLLGICLTSTVQLITQLMPF----GCLLDYVREHKDNIGSQYLLNWCVQIAK 128
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVG-TPC-W 183
+ YL +HRD+ A N+L+ + +K+ DFG++ + G ++ + G P W
Sbjct: 129 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL---GAEEKEYHAEGGKVPIKW 185
Query: 184 MAPEVMQQLHG-YDFKADIWSFGITALEL-AHGHAPFSKYP 222
MA E + LH Y ++D+WS+G+T EL G P+ P
Sbjct: 186 MALESI--LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 224
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 103/255 (40%), Gaps = 40/255 (15%)
Query: 61 REVQTMRVTNHPNVLRAHCSFTTGHCL-----WVVMPYMAGGSCLHIMKSAYPEGFEEPV 115
RE++ ++ H NV+ FT L ++ ++ G +I+K + +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDH 126
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
+ L+ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ D
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------EMT 180
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 234
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 181 GYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 235 PPG------LDYERDKRFSKSFKE-------------------LVTACLVKDPKKRPTAE 269
PG + E + + +S + L+ LV D KR TA
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 270 KLMKHHFFKHARSND 284
+ + H +F D
Sbjct: 301 QALAHAYFAQYHDPD 315
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 103/255 (40%), Gaps = 40/255 (15%)
Query: 61 REVQTMRVTNHPNVLRAHCSFTTGHCL-----WVVMPYMAGGSCLHIMKSAYPEGFEEPV 115
RE++ ++ H NV+ FT L ++ ++ G +I+K + +
Sbjct: 90 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDH 146
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
+ L+ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ D
Sbjct: 147 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------EMT 200
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 234
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 201 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 260
Query: 235 PPG------LDYERDKRFSKSFKE-------------------LVTACLVKDPKKRPTAE 269
PG + E + + +S + L+ LV D KR TA
Sbjct: 261 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 320
Query: 270 KLMKHHFFKHARSND 284
+ + H +F D
Sbjct: 321 QALAHAYFAQYHDPD 335
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 115/279 (41%), Gaps = 20/279 (7%)
Query: 3 LVVEKRFPVDAKDYRLYEEVGEGVSATVYR--ALCIPLNEI---VAIKVLDLEKCNNDLD 57
+ V + V + L E+G+G VY A I E VA+K ++ +
Sbjct: 3 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 62
Query: 58 GIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPE-----GFE 112
E M+ +V+R + G VVM MA G ++S PE G
Sbjct: 63 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 122
Query: 113 EPVIATLLR---ETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGD 169
P + +++ E + YL+ +HRD+ A N ++ + +K+ DFG++ + + D
Sbjct: 123 PPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXET-D 181
Query: 170 RQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAH-GHAPFSKYPPMKVLL 228
R + WMAPE ++ + +D+WSFG+ E+ P+ +VL
Sbjct: 182 XXRKGGKGLLPVRWMAPESLKD-GVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLK 240
Query: 229 MTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPT 267
+ G ++ + +L+ C +PK RPT
Sbjct: 241 FVMD----GGYLDQPDNCPERVTDLMRMCWQFNPKMRPT 275
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 103/255 (40%), Gaps = 40/255 (15%)
Query: 61 REVQTMRVTNHPNVLRAHCSFTTGHCL-----WVVMPYMAGGSCLHIMKSAYPEGFEEPV 115
RE++ ++ H NV+ FT L ++ ++ G +I+K + +
Sbjct: 72 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDH 128
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
+ L+ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ D
Sbjct: 129 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------EMT 182
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 234
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 183 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 242
Query: 235 PPG------LDYERDKRFSKSFKE-------------------LVTACLVKDPKKRPTAE 269
PG + E + + +S + L+ LV D KR TA
Sbjct: 243 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 302
Query: 270 KLMKHHFFKHARSND 284
+ + H +F D
Sbjct: 303 QALAHAYFAQYHDPD 317
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 103/255 (40%), Gaps = 40/255 (15%)
Query: 61 REVQTMRVTNHPNVLRAHCSFTTGHCL-----WVVMPYMAGGSCLHIMKSAYPEGFEEPV 115
RE++ ++ H NV+ FT L ++ ++ G +I+K + +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDH 126
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
+ L+ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ D
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------EMT 180
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 234
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 235 PPG------LDYERDKRFSKSFKE-------------------LVTACLVKDPKKRPTAE 269
PG + E + + +S + L+ LV D KR TA
Sbjct: 241 TPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 270 KLMKHHFFKHARSND 284
+ + H +F D
Sbjct: 301 QALAHAYFAQYHDPD 315
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 103/255 (40%), Gaps = 40/255 (15%)
Query: 61 REVQTMRVTNHPNVLRAHCSFTTGHCL-----WVVMPYMAGGSCLHIMKSAYPEGFEEPV 115
RE++ ++ H NV+ FT L ++ ++ G +I+K + +
Sbjct: 80 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDH 136
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
+ L+ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ D
Sbjct: 137 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------EMT 190
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 234
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 191 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 250
Query: 235 PPG------LDYERDKRFSKSFKE-------------------LVTACLVKDPKKRPTAE 269
PG + E + + +S + L+ LV D KR TA
Sbjct: 251 TPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 310
Query: 270 KLMKHHFFKHARSND 284
+ + H +F D
Sbjct: 311 QALAHAYFAQYHDPD 325
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 70/137 (51%), Gaps = 8/137 (5%)
Query: 87 LWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNIL 146
L++V YMA GS + ++S + + +A+ YL + +HRD+ A N+L
Sbjct: 75 LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVL 134
Query: 147 IDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGI 206
+ + K++DFG++ +A Q + V W APE +++ + K+D+WSFGI
Sbjct: 135 VSEDNVAKVSDFGLTK---EASSTQDTGKLPVK---WTAPEALRE-KKFSTKSDVWSFGI 187
Query: 207 TALEL-AHGHAPFSKYP 222
E+ + G P+ + P
Sbjct: 188 LLWEIYSFGRVPYPRIP 204
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 105/257 (40%), Gaps = 44/257 (17%)
Query: 61 REVQTMRVTNHPNVLRAHCSFTTGHCL-----WVVMPYMAGGSCLHIMKSAYPEGFEEPV 115
RE++ ++ H NV+ FT L ++ ++ G +I+K + +
Sbjct: 66 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDH 122
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFD--AGDRQRS 173
+ L+ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ D AG
Sbjct: 123 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAG----- 177
Query: 174 RNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ- 232
FV T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 178 ---FVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 234
Query: 233 NAPPG------LDYERDKRFSKSFKE-------------------LVTACLVKDPKKRPT 267
PG + E + + +S + L+ LV D KR T
Sbjct: 235 VGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRIT 294
Query: 268 AEKLMKHHFFKHARSND 284
A + + H +F D
Sbjct: 295 AAQALAHAYFAQYHDPD 311
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 119/302 (39%), Gaps = 43/302 (14%)
Query: 16 YRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR--REVQTMRVTNHPN 73
Y+ VG G +V A VA+K L + + R RE++ ++ H N
Sbjct: 43 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHEN 101
Query: 74 VLRAHCSFTTGHCL-----WVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALV 128
V+ FT L ++ ++ G +I+K + + + L+ + L+ L
Sbjct: 102 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGLK 158
Query: 129 YLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEV 188
Y+H IHRD+K N+ ++ + +K+ DFG++ D +V T + APE+
Sbjct: 159 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------EMTGYVATRWYRAPEI 212
Query: 189 MQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NAPPG------LDYE 241
M Y+ DIWS G EL G F + L + L+ PG + E
Sbjct: 213 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 272
Query: 242 RDKRFSKSFKE-------------------LVTACLVKDPKKRPTAEKLMKHHFFKHARS 282
+ + +S + L+ LV D KR TA + + H +F
Sbjct: 273 SARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 332
Query: 283 ND 284
D
Sbjct: 333 PD 334
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 119/302 (39%), Gaps = 43/302 (14%)
Query: 16 YRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR--REVQTMRVTNHPN 73
Y+ VG G +V A VA+K L + + R RE++ ++ H N
Sbjct: 44 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHEN 102
Query: 74 VLRAHCSFTTGHCL-----WVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALV 128
V+ FT L ++ ++ G +I+K + + + L+ + L+ L
Sbjct: 103 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGLK 159
Query: 129 YLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEV 188
Y+H IHRD+K N+ ++ + +K+ DFG++ D +V T + APE+
Sbjct: 160 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------EMTGYVATRWYRAPEI 213
Query: 189 MQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NAPPG------LDYE 241
M Y+ DIWS G EL G F + L + L+ PG + E
Sbjct: 214 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 273
Query: 242 RDKRFSKSFKE-------------------LVTACLVKDPKKRPTAEKLMKHHFFKHARS 282
+ + +S + L+ LV D KR TA + + H +F
Sbjct: 274 SARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 333
Query: 283 ND 284
D
Sbjct: 334 PD 335
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 101/221 (45%), Gaps = 25/221 (11%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLE-------KCNNDLDGIRREVQTMR 67
+++ + +G G TVY+ L IP E V I V E K N + I E M
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE---ILDEAYVMA 73
Query: 68 VTNHPNVLR--AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
++P+V R C +T + +MP+ G L ++ + + + + K
Sbjct: 74 SVDNPHVCRLLGICLTSTVQLIMQLMPF---GXLLDYVRE-HKDNIGSQYLLNWCVQIAK 129
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVG-TPC-W 183
+ YL +HRD+ A N+L+ + +K+ DFG++ + G ++ + G P W
Sbjct: 130 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL---GAEEKEYHAEGGKVPIKW 186
Query: 184 MAPEVMQQLHG-YDFKADIWSFGITALEL-AHGHAPFSKYP 222
MA E + LH Y ++D+WS+G+T EL G P+ P
Sbjct: 187 MALESI--LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 225
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 99/220 (45%), Gaps = 22/220 (10%)
Query: 9 FPVDAKDYRLYEEVGEGVSATV----YRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQ 64
+ ++ K+ +L + +G+G V YR VA+K + K + E
Sbjct: 7 WALNMKELKLLQTIGKGEFGDVMLGDYRG------NKVAVKCI---KNDATAQAFLAEAS 57
Query: 65 TMRVTNHPNVLRAHCSFTTGHC-LWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRET 123
M H N+++ L++V YMA GS + ++S + +
Sbjct: 58 VMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDV 117
Query: 124 LKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCW 183
+A+ YL + +HRD+ A N+L+ + K++DFG++ +A Q + V W
Sbjct: 118 CEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK---EASSTQDTGKLPVK---W 171
Query: 184 MAPEVMQQLHGYDFKADIWSFGITALEL-AHGHAPFSKYP 222
APE +++ + K+D+WSFGI E+ + G P+ + P
Sbjct: 172 TAPEALRE-AAFSTKSDVWSFGILLWEIYSFGRVPYPRIP 210
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 103/255 (40%), Gaps = 40/255 (15%)
Query: 61 REVQTMRVTNHPNVLRAHCSFTTGHCL-----WVVMPYMAGGSCLHIMKSAYPEGFEEPV 115
RE++ ++ H NV+ FT L ++ ++ G +I+K A +
Sbjct: 66 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCA---KLTDDH 122
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
+ L+ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ D
Sbjct: 123 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------EMT 176
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 234
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 177 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 236
Query: 235 PPG------LDYERDKRFSKSFKE-------------------LVTACLVKDPKKRPTAE 269
PG + E + + +S + L+ LV D KR TA
Sbjct: 237 TPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 296
Query: 270 KLMKHHFFKHARSND 284
+ + H +F D
Sbjct: 297 QALAHAYFAQYHDPD 311
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 115/279 (41%), Gaps = 20/279 (7%)
Query: 3 LVVEKRFPVDAKDYRLYEEVGEGVSATVYR--ALCIPLNEI---VAIKVLDLEKCNNDLD 57
+ V + V + L E+G+G VY A I E VA+K ++ +
Sbjct: 6 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 58 GIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPE-----GFE 112
E M+ +V+R + G VVM MA G ++S PE G
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 113 EPVIATLLR---ETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGD 169
P + +++ E + YL+ +HRD+ A N ++ + +K+ DFG++ + + D
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXET-D 184
Query: 170 RQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAH-GHAPFSKYPPMKVLL 228
R + WMAPE ++ + +D+WSFG+ E+ P+ +VL
Sbjct: 185 XXRKGGKGLLPVRWMAPESLKD-GVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLK 243
Query: 229 MTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPT 267
+ G ++ + +L+ C +PK RPT
Sbjct: 244 FVMD----GGYLDQPDNCPERVTDLMRMCWQFNPKMRPT 278
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 99/221 (44%), Gaps = 25/221 (11%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLE-------KCNNDLDGIRREVQTMR 67
+++ + +G G TVY+ L IP E V I V E K N + I E M
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE---ILDEAYVMA 66
Query: 68 VTNHPNVLR--AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
++P+V R C +T + +MP+ CL + + + + K
Sbjct: 67 SVDNPHVCRLLGICLTSTVQLITQLMPF----GCLLDYVREHKDNIGSQYLLNWCVQIAK 122
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVG-TPC-W 183
+ YL +HRD+ A N+L+ + +K+ DFG++ + G ++ + G P W
Sbjct: 123 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL---GAEEKEYHAEGGKVPIKW 179
Query: 184 MAPEVMQQLHG-YDFKADIWSFGITALEL-AHGHAPFSKYP 222
MA E + LH Y ++D+WS+G+T EL G P+ P
Sbjct: 180 MALESI--LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 218
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 103/255 (40%), Gaps = 40/255 (15%)
Query: 61 REVQTMRVTNHPNVLRAHCSFTTGHCL-----WVVMPYMAGGSCLHIMKSAYPEGFEEPV 115
RE++ ++ H NV+ FT L ++ ++ G +I+K + +
Sbjct: 67 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDH 123
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
+ L+ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ D
Sbjct: 124 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------EMT 177
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 234
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 178 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 237
Query: 235 PPG------LDYERDKRFSKSFKE-------------------LVTACLVKDPKKRPTAE 269
PG + E + + +S + L+ LV D KR TA
Sbjct: 238 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 297
Query: 270 KLMKHHFFKHARSND 284
+ + H +F D
Sbjct: 298 QALAHAYFAQYHDPD 312
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 70/137 (51%), Gaps = 8/137 (5%)
Query: 87 LWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGHIHRDVKAGNIL 146
L++V YMA GS + ++S + + +A+ YL + +HRD+ A N+L
Sbjct: 90 LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVL 149
Query: 147 IDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGI 206
+ + K++DFG++ +A Q + V W APE +++ + K+D+WSFGI
Sbjct: 150 VSEDNVAKVSDFGLTK---EASSTQDTGKLPVK---WTAPEALRE-KKFSTKSDVWSFGI 202
Query: 207 TALEL-AHGHAPFSKYP 222
E+ + G P+ + P
Sbjct: 203 LLWEIYSFGRVPYPRIP 219
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 103/255 (40%), Gaps = 40/255 (15%)
Query: 61 REVQTMRVTNHPNVLRAHCSFTTGHCL-----WVVMPYMAGGSCLHIMKSAYPEGFEEPV 115
RE++ ++ H NV+ FT L ++ ++ G +I+K + +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDH 126
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
+ L+ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ D
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------EMT 180
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 234
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 235 PPG------LDYERDKRFSKSFKE-------------------LVTACLVKDPKKRPTAE 269
PG + E + + +S + L+ LV D KR TA
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 270 KLMKHHFFKHARSND 284
+ + H +F D
Sbjct: 301 QALAHAYFAQYHDPD 315
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 103/255 (40%), Gaps = 40/255 (15%)
Query: 61 REVQTMRVTNHPNVLRAHCSFTTGHCL-----WVVMPYMAGGSCLHIMKSAYPEGFEEPV 115
RE++ ++ H NV+ FT L ++ ++ G +I+K + +
Sbjct: 67 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDH 123
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
+ L+ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ D
Sbjct: 124 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------EMT 177
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 234
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 178 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 237
Query: 235 PPG------LDYERDKRFSKSFKE-------------------LVTACLVKDPKKRPTAE 269
PG + E + + +S + L+ LV D KR TA
Sbjct: 238 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 297
Query: 270 KLMKHHFFKHARSND 284
+ + H +F D
Sbjct: 298 QALAHAYFAQYHDPD 312
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 103/255 (40%), Gaps = 40/255 (15%)
Query: 61 REVQTMRVTNHPNVLRAHCSFTTGHCL-----WVVMPYMAGGSCLHIMKSAYPEGFEEPV 115
RE++ ++ H NV+ FT L ++ ++ G +I+K + +
Sbjct: 75 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDH 131
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
+ L+ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ D
Sbjct: 132 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------EMT 185
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 234
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 186 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 245
Query: 235 PPG------LDYERDKRFSKSFKE-------------------LVTACLVKDPKKRPTAE 269
PG + E + + +S + L+ LV D KR TA
Sbjct: 246 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 305
Query: 270 KLMKHHFFKHARSND 284
+ + H +F D
Sbjct: 306 QALAHAYFAQYHDPD 320
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 20/221 (9%)
Query: 5 VEKRFPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGI----R 60
VE F + Y ++G+G V++A + VA+K + +E N+ +G
Sbjct: 9 VECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLME---NEKEGFPITAL 65
Query: 61 REVQTMRVTNHPNVL------RAHCSFTTGHCLWVVMPYMAGGSCLHIMK---SAYPEGF 111
RE++ +++ H NV+ R S C + Y+ C H + S F
Sbjct: 66 REIKILQLLKHENVVNLIEICRTKAS-PYNRCKGSI--YLVFDFCEHDLAGLLSNVLVKF 122
Query: 112 EEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQ 171
I +++ L L Y+H + +HRD+KA N+LI +G +KLADFG++ A + Q
Sbjct: 123 TLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQ 182
Query: 172 RSR-NTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALEL 211
+R V T + PE++ Y D+W G E+
Sbjct: 183 PNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 223
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 103/255 (40%), Gaps = 40/255 (15%)
Query: 61 REVQTMRVTNHPNVLRAHCSFTTGHCL-----WVVMPYMAGGSCLHIMKSAYPEGFEEPV 115
RE++ ++ H NV+ FT L ++ ++ G +I+K + +
Sbjct: 68 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDH 124
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
+ L+ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ D
Sbjct: 125 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------EMT 178
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 234
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 179 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 238
Query: 235 PPG------LDYERDKRFSKSFKE-------------------LVTACLVKDPKKRPTAE 269
PG + E + + +S + L+ LV D KR TA
Sbjct: 239 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 298
Query: 270 KLMKHHFFKHARSND 284
+ + H +F D
Sbjct: 299 QALAHAYFAQYHDPD 313
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 103/255 (40%), Gaps = 40/255 (15%)
Query: 61 REVQTMRVTNHPNVLRAHCSFTTGHCL-----WVVMPYMAGGSCLHIMKSAYPEGFEEPV 115
RE++ ++ H NV+ FT L ++ ++ G +I+K + +
Sbjct: 66 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDH 122
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
+ L+ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ D
Sbjct: 123 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------EMT 176
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 234
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 177 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 236
Query: 235 PPG------LDYERDKRFSKSFKE-------------------LVTACLVKDPKKRPTAE 269
PG + E + + +S + L+ LV D KR TA
Sbjct: 237 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 296
Query: 270 KLMKHHFFKHARSND 284
+ + H +F D
Sbjct: 297 QALAHAYFAQYHDPD 311
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 86/169 (50%), Gaps = 12/169 (7%)
Query: 111 FEEPV----IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFD 166
++EP+ + + + + + +L IHRD+ A NIL+ N +K+ DFG++ ++
Sbjct: 192 YKEPITMEDLISYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYK 251
Query: 167 AGDRQRSRNTFVGTPCWMAPE-VMQQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPM 224
D R +T + WMAPE + ++ Y K+D+WS+G+ E+ + G +P YP +
Sbjct: 252 NPDYVRKGDTRLPLK-WMAPESIFDKI--YSTKSDVWSYGVLLWEIFSLGGSP---YPGV 305
Query: 225 KVLLMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMK 273
++ G+ + + +++ C +DPK+RP +L++
Sbjct: 306 QMDEDFCSRLREGMRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAELVE 354
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 101/221 (45%), Gaps = 25/221 (11%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLE-------KCNNDLDGIRREVQTMR 67
+++ + +G G TVY+ L IP E V I V E K N + I E M
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE---ILDEAYVMA 72
Query: 68 VTNHPNVLR--AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
++P+V R C +T + +MP+ G L ++ + + + + K
Sbjct: 73 SVDNPHVCRLLGICLTSTVQLITQLMPF---GXLLDYVRE-HKDNIGSQYLLNWCVQIAK 128
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVG-TPC-W 183
+ YL +HRD+ A N+L+ + +K+ DFG++ + G ++ + G P W
Sbjct: 129 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL---GAEEKEYHAEGGKVPIKW 185
Query: 184 MAPEVMQQLHG-YDFKADIWSFGITALEL-AHGHAPFSKYP 222
MA E + LH Y ++D+WS+G+T EL G P+ P
Sbjct: 186 MALESI--LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 224
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 114/269 (42%), Gaps = 23/269 (8%)
Query: 23 GEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMR-VTNHPNVLRAHCSF 81
G+ V AT Y + VA+K+L + + + E++ + + NH N++ +
Sbjct: 53 GKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGAC 112
Query: 82 TTGHCLWVVMPYMAGGSCLHIMK---SAYPEGFEEPVI-------------ATLLRETLK 125
T G V+ Y G L+ ++ ++ P I + + K
Sbjct: 113 TIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAK 172
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
+ +L IHRD+ A NIL+ K+ DFG++ + + + N + WMA
Sbjct: 173 GMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVK-WMA 231
Query: 186 PEVMQQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDK 244
PE + Y F++D+WS+GI EL + G +P YP M V + G +
Sbjct: 232 PESIFNC-VYTFESDVWSYGIFLWELFSLGSSP---YPGMPVDSKFYKMIKEGFRMLSPE 287
Query: 245 RFSKSFKELVTACLVKDPKKRPTAEKLMK 273
+++ C DP KRPT +++++
Sbjct: 288 HAPAEMYDIMKTCWDADPLKRPTFKQIVQ 316
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 113/274 (41%), Gaps = 33/274 (12%)
Query: 23 GEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMR-VTNHPNVLRAHCSF 81
G+ V AT Y + VA+K+L + + + E++ + + NH N++ +
Sbjct: 37 GKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGAC 96
Query: 82 TTGHCLWVVMPYMAGGSCLHIMK---SAYPEGFEEPVI-------------ATLLRETLK 125
T G V+ Y G L+ ++ ++ P I + + K
Sbjct: 97 TIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAK 156
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPC--- 182
+ +L IHRD+ A NIL+ K+ DFG+ A D + N V
Sbjct: 157 GMAFLASKNCIHRDLAARNILLTHGRITKICDFGL------ARDIKNDSNYVVKGNARLP 210
Query: 183 --WMAPEVMQQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLD 239
WMAPE + Y F++D+WS+GI EL + G +P YP M V + G
Sbjct: 211 VKWMAPESIFNC-VYTFESDVWSYGIFLWELFSLGSSP---YPGMPVDSKFYKMIKEGFR 266
Query: 240 YERDKRFSKSFKELVTACLVKDPKKRPTAEKLMK 273
+ +++ C DP KRPT +++++
Sbjct: 267 MLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 300
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 114/269 (42%), Gaps = 23/269 (8%)
Query: 23 GEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMR-VTNHPNVLRAHCSF 81
G+ V AT Y + VA+K+L + + + E++ + + NH N++ +
Sbjct: 60 GKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGAC 119
Query: 82 TTGHCLWVVMPYMAGGSCLHIMK---SAYPEGFEEPVI-------------ATLLRETLK 125
T G V+ Y G L+ ++ ++ P I + + K
Sbjct: 120 TIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAK 179
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
+ +L IHRD+ A NIL+ K+ DFG++ + + + N + WMA
Sbjct: 180 GMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPVK-WMA 238
Query: 186 PEVMQQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDK 244
PE + Y F++D+WS+GI EL + G +P YP M V + G +
Sbjct: 239 PESIFNC-VYTFESDVWSYGIFLWELFSLGSSP---YPGMPVDSKFYKMIKEGFRMLSPE 294
Query: 245 RFSKSFKELVTACLVKDPKKRPTAEKLMK 273
+++ C DP KRPT +++++
Sbjct: 295 HAPAEMYDIMKTCWDADPLKRPTFKQIVQ 323
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 114/269 (42%), Gaps = 23/269 (8%)
Query: 23 GEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMR-VTNHPNVLRAHCSF 81
G+ V AT Y + VA+K+L + + + E++ + + NH N++ +
Sbjct: 60 GKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGAC 119
Query: 82 TTGHCLWVVMPYMAGGSCLHIMK---SAYPEGFEEPVI-------------ATLLRETLK 125
T G V+ Y G L+ ++ ++ P I + + K
Sbjct: 120 TIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAK 179
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
+ +L IHRD+ A NIL+ K+ DFG++ + + + N + WMA
Sbjct: 180 GMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVK-WMA 238
Query: 186 PEVMQQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDK 244
PE + Y F++D+WS+GI EL + G +P YP M V + G +
Sbjct: 239 PESIFNC-VYTFESDVWSYGIFLWELFSLGSSP---YPGMPVDSKFYKMIKEGFRMLSPE 294
Query: 245 RFSKSFKELVTACLVKDPKKRPTAEKLMK 273
+++ C DP KRPT +++++
Sbjct: 295 HAPAEMYDIMKTCWDADPLKRPTFKQIVQ 323
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 103/255 (40%), Gaps = 40/255 (15%)
Query: 61 REVQTMRVTNHPNVLRAHCSFTTGHCL-----WVVMPYMAGGSCLHIMKSAYPEGFEEPV 115
RE++ ++ H NV+ FT L ++ ++ G +I+K + +
Sbjct: 66 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDH 122
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
+ L+ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ D
Sbjct: 123 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------EMT 176
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 234
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 177 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 236
Query: 235 PPG------LDYERDKRFSKSFKE-------------------LVTACLVKDPKKRPTAE 269
PG + E + + +S + L+ LV D KR TA
Sbjct: 237 TPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 296
Query: 270 KLMKHHFFKHARSND 284
+ + H +F D
Sbjct: 297 QALAHAYFAQYHDPD 311
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 103/255 (40%), Gaps = 40/255 (15%)
Query: 61 REVQTMRVTNHPNVLRAHCSFTTGHCL-----WVVMPYMAGGSCLHIMKSAYPEGFEEPV 115
RE++ ++ H NV+ FT L ++ ++ G +I+K + +
Sbjct: 76 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDH 132
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
+ L+ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ D
Sbjct: 133 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------EMT 186
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 234
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 187 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 246
Query: 235 PPG------LDYERDKRFSKSFKE-------------------LVTACLVKDPKKRPTAE 269
PG + E + + +S + L+ LV D KR TA
Sbjct: 247 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 306
Query: 270 KLMKHHFFKHARSND 284
+ + H +F D
Sbjct: 307 QALAHAYFAQYHDPD 321
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 114/274 (41%), Gaps = 33/274 (12%)
Query: 23 GEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMR-VTNHPNVLRAHCSF 81
G+ V AT Y + VA+K+L + + + E++ + + NH N++ +
Sbjct: 55 GKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGAC 114
Query: 82 TTGHCLWVVMPYMAGGSCLHIMK---SAYPEGFEEPVI-------------ATLLRETLK 125
T G V+ Y G L+ ++ ++ P I + + K
Sbjct: 115 TIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAK 174
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVG----TP 181
+ +L IHRD+ A NIL+ K+ DFG+ A D + N V P
Sbjct: 175 GMAFLASKNCIHRDLAARNILLTHGRITKICDFGL------ARDIKNDSNYVVKGNARLP 228
Query: 182 C-WMAPEVMQQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLD 239
WMAPE + Y F++D+WS+GI EL + G +P YP M V + G
Sbjct: 229 VKWMAPESIFNC-VYTFESDVWSYGIFLWELFSLGSSP---YPGMPVDSKFYKMIKEGFR 284
Query: 240 YERDKRFSKSFKELVTACLVKDPKKRPTAEKLMK 273
+ +++ C DP KRPT +++++
Sbjct: 285 MLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 318
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 103/255 (40%), Gaps = 40/255 (15%)
Query: 61 REVQTMRVTNHPNVLRAHCSFTTGHCL-----WVVMPYMAGGSCLHIMKSAYPEGFEEPV 115
RE++ ++ H NV+ FT L ++ ++ G +I+K + +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDH 126
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
+ L+ + L+ L Y+H IHRD+K N+ ++ + +K+ D+G++ D
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLARHTDD------EMT 180
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 234
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 235 PPG------LDYERDKRFSKSFKE-------------------LVTACLVKDPKKRPTAE 269
PG + E + + +S + L+ LV D KR TA
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 270 KLMKHHFFKHARSND 284
+ + H +F D
Sbjct: 301 QALAHAYFAQYHDPD 315
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 119/302 (39%), Gaps = 43/302 (14%)
Query: 16 YRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIR--REVQTMRVTNHPN 73
Y+ VG G +V A VA+K L + + R RE++ ++ H N
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHEN 88
Query: 74 VLRAHCSFTTGHCL-----WVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALV 128
V+ FT L ++ ++ G +I+K + + + L+ + L+ L
Sbjct: 89 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGLK 145
Query: 129 YLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEV 188
Y+H IHRD+K N+ ++ + +K+ DFG++ D +V T + APE+
Sbjct: 146 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------EMTGYVATRWYRAPEI 199
Query: 189 MQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NAPPG------LDYE 241
M Y+ DIWS G EL G F + L + L+ PG + E
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 259
Query: 242 RDKRFSKSFKE-------------------LVTACLVKDPKKRPTAEKLMKHHFFKHARS 282
+ + +S + L+ LV D KR TA + + H +F
Sbjct: 260 SARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 319
Query: 283 ND 284
D
Sbjct: 320 PD 321
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 84/209 (40%), Gaps = 11/209 (5%)
Query: 16 YRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNV- 74
Y + +GEG V A VAIK + + RE+Q + H NV
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVI 104
Query: 75 -----LRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVY 129
LRA + +++V M ++KS + I L + L+ L Y
Sbjct: 105 GIRDILRA-STLEAMRDVYIVQDLMET-DLYKLLKS---QQLSNDHICYFLYQILRGLKY 159
Query: 130 LHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVM 189
+H +HRD+K N+LI++ +K+ DFG++ D V T + APE+M
Sbjct: 160 IHSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIM 219
Query: 190 QQLHGYDFKADIWSFGITALELAHGHAPF 218
GY DIWS G E+ F
Sbjct: 220 LNSKGYTKSIDIWSVGCILAEMLSNRPIF 248
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 98/221 (44%), Gaps = 25/221 (11%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLE-------KCNNDLDGIRREVQTMR 67
+++ + + G TVY+ L IP E V I V E K N + I E M
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE---ILDEAYVMA 79
Query: 68 VTNHPNVLR--AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
++P+V R C +T + +MP+ CL + + + + K
Sbjct: 80 SVDNPHVCRLLGICLTSTVQLIMQLMPF----GCLLDYVREHKDNIGSQYLLNWCVQIAK 135
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVG-TPC-W 183
+ YL +HRD+ A N+L+ + +K+ DFG++ + G ++ + G P W
Sbjct: 136 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL---GAEEKEYHAEGGKVPIKW 192
Query: 184 MAPEVMQQLHG-YDFKADIWSFGITALEL-AHGHAPFSKYP 222
MA E + LH Y ++D+WS+G+T EL G P+ P
Sbjct: 193 MALESI--LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 231
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 116/284 (40%), Gaps = 30/284 (10%)
Query: 9 FPV-DAKDYRLYEEVGEGVSATVYRALCIP--LNEIVAIKVLDLEKCNNDLDGIRREVQT 65
+PV D D + + +GEG V +A L AIK + +D E++
Sbjct: 9 YPVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEV 68
Query: 66 M-RVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIM-KSAYPEGFEEPVIATLLRET 123
+ ++ +HPN++ + L++ + Y G+ L + KS E IA T
Sbjct: 69 LCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 128
Query: 124 LKALVYLHFHG-------------HIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDR 170
L + LHF IHRD+ A NIL+ N K+ADFG+S G
Sbjct: 129 LSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLS-----RGQE 183
Query: 171 QRSRNTFVGTPC-WMAPEVMQQLHGYDFKADIWSFGITALELAH-GHAPFSKYPPMKVLL 228
+ T P WMA E + Y +D+WS+G+ E+ G P+ ++
Sbjct: 184 VYVKKTMGRLPVRWMAIESL-NYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL-- 240
Query: 229 MTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLM 272
+ P G E+ +L+ C + P +RP+ +++
Sbjct: 241 --YEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQIL 282
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 116/284 (40%), Gaps = 30/284 (10%)
Query: 9 FPV-DAKDYRLYEEVGEGVSATVYRALCIP--LNEIVAIKVLDLEKCNNDLDGIRREVQT 65
+PV D D + + +GEG V +A L AIK + +D E++
Sbjct: 19 YPVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEV 78
Query: 66 M-RVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIM-KSAYPEGFEEPVIATLLRET 123
+ ++ +HPN++ + L++ + Y G+ L + KS E IA T
Sbjct: 79 LCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 138
Query: 124 LKALVYLHFHG-------------HIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDR 170
L + LHF IHRD+ A NIL+ N K+ADFG+S G
Sbjct: 139 LSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLS-----RGQE 193
Query: 171 QRSRNTFVGTPC-WMAPEVMQQLHGYDFKADIWSFGITALELAH-GHAPFSKYPPMKVLL 228
+ T P WMA E + Y +D+WS+G+ E+ G P+ ++
Sbjct: 194 VYVKKTMGRLPVRWMAIESL-NYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL-- 250
Query: 229 MTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLM 272
+ P G E+ +L+ C + P +RP+ +++
Sbjct: 251 --YEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQIL 292
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 99/229 (43%), Gaps = 36/229 (15%)
Query: 21 EVGEGVSATVYRALC---IPLN--EIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVL 75
++GEG V++A +P +VA+K+L E + +RE M ++PN++
Sbjct: 54 DIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIV 113
Query: 76 RAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGF------------------------ 111
+ G + ++ YMA G ++S P
Sbjct: 114 KLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSC 173
Query: 112 -EEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDR 170
E+ IA R+ + YL +HRD+ N L+ N +K+ADFG+S ++ A
Sbjct: 174 AEQLCIA---RQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYY 230
Query: 171 QRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALEL-AHGHAPF 218
+ N + WM PE + + Y ++D+W++G+ E+ ++G P+
Sbjct: 231 KADGNDAIPIR-WMPPESIFY-NRYTTESDVWAYGVVLWEIFSYGLQPY 277
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 25/221 (11%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLE-------KCNNDLDGIRREVQTMR 67
+++ + +G G TVY+ L IP E V I V E K N + I E M
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE---ILDEAYVMA 69
Query: 68 VTNHPNVLR--AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
++P+V R C +T + +MP+ CL + + + + +
Sbjct: 70 SVDNPHVCRLLGICLTSTVQLITQLMPF----GCLLDYVREHKDNIGSQYLLNWCVQIAE 125
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVG-TPC-W 183
+ YL +HRD+ A N+L+ + +K+ DFG++ + G ++ + G P W
Sbjct: 126 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL---GAEEKEYHAEGGKVPIKW 182
Query: 184 MAPEVMQQLHG-YDFKADIWSFGITALEL-AHGHAPFSKYP 222
MA E + LH Y ++D+WS+G+T EL G P+ P
Sbjct: 183 MALESI--LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 221
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 127/296 (42%), Gaps = 32/296 (10%)
Query: 7 KRFPVDAKDY-------RLYEEVGEGVSATVYRALCIPLNEI-----VAIKVLDLEKCNN 54
+R P DA + +L + +G G V A +++ VA+K+L ++
Sbjct: 15 ERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS 74
Query: 55 DLDGIRREVQTM-RVTNHPNVLRAHCSFTT-GHCLWVVMPYMAGGSCLHIMKSA------ 106
+ + E++ + + +H NV+ + T G L V++ + G+ ++S
Sbjct: 75 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 134
Query: 107 YPEGFEEPVIATLLRETL--------KALVYLHFHGHIHRDVKAGNILIDSNGAIKLADF 158
Y E E+ L E L K + +L IHRD+ A NIL+ +K+ DF
Sbjct: 135 YKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDF 194
Query: 159 GVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
G++ ++ D R + + WMAPE + Y ++D+WSFG+ E+ A
Sbjct: 195 GLARDIYKDPDYVRKGDARLPLK-WMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGA-- 250
Query: 219 SKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKH 274
S YP +K+ + G + + + C +P +RPT +L++H
Sbjct: 251 SPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 306
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%)
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
I L + L+ L Y+H +HRD+K N+L+++ +K+ DFG++ D
Sbjct: 128 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLT 187
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALEL 211
+V T + APE+M GY DIWS G E+
Sbjct: 188 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 223
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 98/221 (44%), Gaps = 17/221 (7%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNE----IVAIKVLDLEKCNNDLDGIRREVQTMRVTN 70
+ R + +G G TVY+ + IP E VAIKVL I E M
Sbjct: 18 ELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVG 77
Query: 71 HPNVLR--AHCSFTTGHCLWVVMPYMAGGSCL--HIMKSAYPEGFEEPVIATLLRETLKA 126
P V R C +T + +MPY CL H+ ++ G ++ + + K
Sbjct: 78 SPYVSRLLGICLTSTVQLVTQLMPY----GCLLDHVRENRGRLGSQD--LLNWCMQIAKG 131
Query: 127 LVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAP 186
+ YL +HRD+ A N+L+ S +K+ DFG+ A + D + + + WMA
Sbjct: 132 MSYLEDVRLVHRDLAARNVLVKSPNHVKITDFGL-ARLLDIDETEYHADGGKVPIKWMAL 190
Query: 187 EVMQQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKV 226
E + + + ++D+WS+G+T EL G P+ P ++
Sbjct: 191 ESILR-RRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREI 230
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 20/221 (9%)
Query: 5 VEKRFPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGI----R 60
VE F + Y ++G+G V++A + VA+K + +E N+ +G
Sbjct: 8 VECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLME---NEKEGFPITAL 64
Query: 61 REVQTMRVTNHPNVL------RAHCSFTTGHCLWVVMPYMAGGSCLHIMK---SAYPEGF 111
RE++ +++ H NV+ R S C + Y+ C H + S F
Sbjct: 65 REIKILQLLKHENVVNLIEICRTKAS-PYNRCKGSI--YLVFDFCEHDLAGLLSNVLVKF 121
Query: 112 EEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQ 171
I +++ L L Y+H + +HRD+KA N+LI +G +KLADFG++ A + Q
Sbjct: 122 TLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQ 181
Query: 172 RSR-NTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALEL 211
+R V T + PE++ Y D+W G E+
Sbjct: 182 PNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 222
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 98/221 (44%), Gaps = 25/221 (11%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLE-------KCNNDLDGIRREVQTMR 67
+++ + + G TVY+ L IP E V I V E K N + I E M
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE---ILDEAYVMA 79
Query: 68 VTNHPNVLR--AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
++P+V R C +T + +MP+ CL + + + + K
Sbjct: 80 SVDNPHVCRLLGICLTSTVQLITQLMPF----GCLLDYVREHKDNIGSQYLLNWCVQIAK 135
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVG-TPC-W 183
+ YL +HRD+ A N+L+ + +K+ DFG++ + G ++ + G P W
Sbjct: 136 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL---GAEEKEYHAEGGKVPIKW 192
Query: 184 MAPEVMQQLHG-YDFKADIWSFGITALEL-AHGHAPFSKYP 222
MA E + LH Y ++D+WS+G+T EL G P+ P
Sbjct: 193 MALESI--LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 231
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 20/221 (9%)
Query: 5 VEKRFPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGI----R 60
VE F + Y ++G+G V++A + VA+K + +E N+ +G
Sbjct: 9 VECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLME---NEKEGFPITAL 65
Query: 61 REVQTMRVTNHPNVL------RAHCSFTTGHCLWVVMPYMAGGSCLHIMK---SAYPEGF 111
RE++ +++ H NV+ R S C + Y+ C H + S F
Sbjct: 66 REIKILQLLKHENVVNLIEICRTKAS-PYNRCKASI--YLVFDFCEHDLAGLLSNVLVKF 122
Query: 112 EEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQ 171
I +++ L L Y+H + +HRD+KA N+LI +G +KLADFG++ A + Q
Sbjct: 123 TLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQ 182
Query: 172 RSR-NTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALEL 211
+R V T + PE++ Y D+W G E+
Sbjct: 183 PNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 223
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 20/221 (9%)
Query: 5 VEKRFPVDAKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGI----R 60
VE F + Y ++G+G V++A + VA+K + +E N+ +G
Sbjct: 9 VECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLME---NEKEGFPITAL 65
Query: 61 REVQTMRVTNHPNVL------RAHCSFTTGHCLWVVMPYMAGGSCLHIMK---SAYPEGF 111
RE++ +++ H NV+ R S C + Y+ C H + S F
Sbjct: 66 REIKILQLLKHENVVNLIEICRTKAS-PYNRCKGSI--YLVFDFCEHDLAGLLSNVLVKF 122
Query: 112 EEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQ 171
I +++ L L Y+H + +HRD+KA N+LI +G +KLADFG++ A + Q
Sbjct: 123 TLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQ 182
Query: 172 RSR-NTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALEL 211
+R V T + PE++ Y D+W G E+
Sbjct: 183 PNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 223
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 98/221 (44%), Gaps = 25/221 (11%)
Query: 15 DYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLE-------KCNNDLDGIRREVQTMR 67
+++ + + G TVY+ L IP E V I V E K N + I E M
Sbjct: 16 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE---ILDEAYVMA 72
Query: 68 VTNHPNVLR--AHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
++P+V R C +T + +MP+ CL + + + + K
Sbjct: 73 SVDNPHVCRLLGICLTSTVQLITQLMPF----GCLLDYVREHKDNIGSQYLLNWCVQIAK 128
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVG-TPC-W 183
+ YL +HRD+ A N+L+ + +K+ DFG++ + G ++ + G P W
Sbjct: 129 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL---GAEEKEYHAEGGKVPIKW 185
Query: 184 MAPEVMQQLHG-YDFKADIWSFGITALEL-AHGHAPFSKYP 222
MA E + LH Y ++D+WS+G+T EL G P+ P
Sbjct: 186 MALESI--LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 224
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 49/103 (47%)
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
I L + L+ L Y+H +HRD+K N+L+++ +K+ DFG++ D
Sbjct: 126 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 185
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
+V T + APE+M GY DIWS G E+ F
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 49/103 (47%)
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
I L + L+ L Y+H +HRD+K N+L+++ +K+ DFG++ D
Sbjct: 126 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 185
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
+V T + APE+M GY DIWS G E+ F
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 49/103 (47%)
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
I L + L+ L Y+H +HRD+K N+L+++ +K+ DFG++ D
Sbjct: 130 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 189
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
+V T + APE+M GY DIWS G E+ F
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 49/103 (47%)
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
I L + L+ L Y+H +HRD+K N+L+++ +K+ DFG++ D
Sbjct: 130 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 189
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
+V T + APE+M GY DIWS G E+ F
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 49/103 (47%)
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
I L + L+ L Y+H +HRD+K N+L+++ +K+ DFG++ D
Sbjct: 128 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 187
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
+V T + APE+M GY DIWS G E+ F
Sbjct: 188 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 230
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 49/103 (47%)
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
I L + L+ L Y+H +HRD+K N+L+++ +K+ DFG++ D
Sbjct: 126 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 185
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
+V T + APE+M GY DIWS G E+ F
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%)
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
I L + L+ L Y+H +HRD+K N+L+++ +K+ DFG++ D
Sbjct: 130 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 189
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALEL 211
+V T + APE+M GY DIWS G E+
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 225
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 49/103 (47%)
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
I L + L+ L Y+H +HRD+K N+L+++ +K+ DFG++ D
Sbjct: 131 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 190
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
+V T + APE+M GY DIWS G E+ F
Sbjct: 191 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 233
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 49/103 (47%)
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
I L + L+ L Y+H +HRD+K N+L+++ +K+ DFG++ D
Sbjct: 132 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 191
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
+V T + APE+M GY DIWS G E+ F
Sbjct: 192 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 234
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 49/103 (47%)
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
I L + L+ L Y+H +HRD+K N+L+++ +K+ DFG++ D
Sbjct: 123 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 182
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
+V T + APE+M GY DIWS G E+ F
Sbjct: 183 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 225
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 49/103 (47%)
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
I L + L+ L Y+H +HRD+K N+L+++ +K+ DFG++ D
Sbjct: 130 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 189
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
+V T + APE+M GY DIWS G E+ F
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 49/103 (47%)
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
I L + L+ L Y+H +HRD+K N+L+++ +K+ DFG++ D
Sbjct: 130 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 189
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
+V T + APE+M GY DIWS G E+ F
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 49/103 (47%)
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
I L + L+ L Y+H +HRD+K N+L+++ +K+ DFG++ D
Sbjct: 134 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 193
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
+V T + APE+M GY DIWS G E+ F
Sbjct: 194 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 236
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 49/103 (47%)
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
I L + L+ L Y+H +HRD+K N+L+++ +K+ DFG++ D
Sbjct: 126 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 185
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
+V T + APE+M GY DIWS G E+ F
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 98/235 (41%), Gaps = 38/235 (16%)
Query: 16 YRLYEEVGEGVSATVYRA---LCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTN-H 71
+++ +++GEG ++VY A L + E +A+K L ++ + I E+Q + V
Sbjct: 23 FKIEDKIGEGTFSSVYLATAQLQVGPEEKIALK--HLIPTSHPIR-IAAELQCLTVAGGQ 79
Query: 72 PNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLH 131
NV+ F + + MPY+ S L I+ S F+E + + KAL +H
Sbjct: 80 DNVMGVKYCFRKNDHVVIAMPYLEHESFLDILNSL---SFQE--VREYMLNLFKALKRIH 134
Query: 132 FHGHIHRDVKAGNILIDSN-GAIKLADFGVSACMFDAG---------------------- 168
G +HRDVK N L + L DFG++ D
Sbjct: 135 QFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCS 194
Query: 169 ---DRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSK 220
R++ GTP + APEV+ + D+WS G+ L L G PF K
Sbjct: 195 ICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYK 249
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 105/245 (42%), Gaps = 21/245 (8%)
Query: 42 VAIKVLDLEKCNNDLDGIRREVQTM-RVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL 100
VA+K+L ++ + + E++ M + H N++ + T G + V+ Y G L
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 138
Query: 101 HIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGH-------------IHRDVKAGNILI 147
+ ++ +P A + TL LHF IHRDV A N+L+
Sbjct: 139 NFLRRKSRVLETDPAFA-IANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLL 197
Query: 148 DSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGIT 207
+ K+ DFG++ + + + N + WMAPE + Y ++D+WS+GI
Sbjct: 198 TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK-WMAPESIFDC-VYTVQSDVWSYGIL 255
Query: 208 ALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRP 266
E+ + G P YP + V + G + K+ ++ AC +P RP
Sbjct: 256 LWEIFSLGLNP---YPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRP 312
Query: 267 TAEKL 271
T +++
Sbjct: 313 TFQQI 317
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 49/103 (47%)
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
I L + L+ L Y+H +HRD+K N+L+++ +K+ DFG++ D
Sbjct: 124 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 183
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
+V T + APE+M GY DIWS G E+ F
Sbjct: 184 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 226
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%)
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
I L + L+ L Y+H +HRD+K N+L+++ +K+ DFG++ D
Sbjct: 128 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 187
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALEL 211
+V T + APE+M GY DIWS G E+
Sbjct: 188 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 223
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 49/103 (47%)
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
I L + L+ L Y+H +HRD+K N+L+++ +K+ DFG++ D
Sbjct: 124 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 183
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
+V T + APE+M GY DIWS G E+ F
Sbjct: 184 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 226
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%)
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
I L + L+ L Y+H +HRD+K N+L+++ +K+ DFG++ D
Sbjct: 146 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 205
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALEL 211
+V T + APE+M GY DIWS G E+
Sbjct: 206 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 241
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 102/255 (40%), Gaps = 40/255 (15%)
Query: 61 REVQTMRVTNHPNVLRAHCSFTTGHCL-----WVVMPYMAGGSCLHIMKSAYPEGFEEPV 115
RE++ ++ H NV+ FT L ++ ++ G +I+K + +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDH 126
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
+ L+ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ D
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------EMT 180
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 234
V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 181 GXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 235 PPG------LDYERDKRFSKSFKE-------------------LVTACLVKDPKKRPTAE 269
PG + E + + +S + L+ LV D KR TA
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 270 KLMKHHFFKHARSND 284
+ + H +F D
Sbjct: 301 QALAHAYFAQYHDPD 315
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%)
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
I L + L+ L Y+H +HRD+K N+L+++ +K+ DFG++ D
Sbjct: 146 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 205
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALEL 211
+V T + APE+M GY DIWS G E+
Sbjct: 206 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 241
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 49/103 (47%)
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
I L + L+ L Y+H +HRD+K N+L+++ +K+ DFG++ D
Sbjct: 126 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLT 185
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
+V T + APE+M GY DIWS G E+ F
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 113/277 (40%), Gaps = 20/277 (7%)
Query: 5 VEKRFPVDAKDYRLYEEVGEGVSATVYR--ALCIPLNEI---VAIKVLDLEKCNNDLDGI 59
V + V + L E+G+G VY A I E VA+K ++ +
Sbjct: 8 VPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEF 67
Query: 60 RREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPE-----GFEEP 114
E M+ +V+R + G VVM MA G ++S PE G P
Sbjct: 68 LNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP 127
Query: 115 VIATLLR---ETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQ 171
+ +++ E + YL+ +HRD+ A N ++ + +K+ DFG++ + + D
Sbjct: 128 TLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXET-DXX 186
Query: 172 RSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAH-GHAPFSKYPPMKVLLMT 230
R + WMAPE ++ + +D+WSFG+ E+ P+ +VL
Sbjct: 187 RKGGKGLLPVRWMAPESLKD-GVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFV 245
Query: 231 LQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPT 267
+ G ++ + +L+ C +P RPT
Sbjct: 246 MD----GGYLDQPDNCPERVTDLMRMCWQFNPNMRPT 278
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 4/153 (2%)
Query: 122 ETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTP 181
+ K + +L IHRD+ A NIL+ +K+ DFG++ ++ D R + +
Sbjct: 208 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 267
Query: 182 CWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYE 241
WMAPE + Y ++D+WSFG+ E+ A S YP +K+ + G
Sbjct: 268 -WMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGA--SPYPGVKIDEEFCRRLKEGTRMR 323
Query: 242 RDKRFSKSFKELVTACLVKDPKKRPTAEKLMKH 274
+ + + C +P +RPT +L++H
Sbjct: 324 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 356
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 4/153 (2%)
Query: 122 ETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTP 181
+ K + +L IHRD+ A NIL+ +K+ DFG++ ++ D R + +
Sbjct: 152 QVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 182 CWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYE 241
WMAPE + Y ++D+WSFG+ E+ A S YP +K+ + G
Sbjct: 212 -WMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGA--SPYPGVKIDEEFCRRLKEGTRMR 267
Query: 242 RDKRFSKSFKELVTACLVKDPKKRPTAEKLMKH 274
+ + + C +P +RPT +L++H
Sbjct: 268 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 300
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 4/153 (2%)
Query: 122 ETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTP 181
+ K + +L IHRD+ A NIL+ +K+ DFG++ ++ D R + +
Sbjct: 206 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 265
Query: 182 CWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYE 241
WMAPE + Y ++D+WSFG+ E+ A S YP +K+ + G
Sbjct: 266 -WMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGA--SPYPGVKIDEEFCRRLKEGTRMR 321
Query: 242 RDKRFSKSFKELVTACLVKDPKKRPTAEKLMKH 274
+ + + C +P +RPT +L++H
Sbjct: 322 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 354
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 4/153 (2%)
Query: 122 ETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTP 181
+ K + +L IHRD+ A NIL+ +K+ DFG++ ++ D R + +
Sbjct: 201 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 260
Query: 182 CWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYE 241
WMAPE + Y ++D+WSFG+ E+ A S YP +K+ + G
Sbjct: 261 -WMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGA--SPYPGVKIDEEFCRRLKEGTRMR 316
Query: 242 RDKRFSKSFKELVTACLVKDPKKRPTAEKLMKH 274
+ + + C +P +RPT +L++H
Sbjct: 317 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 349
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 4/153 (2%)
Query: 122 ETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTP 181
+ K + +L IHRD+ A NIL+ +K+ DFG++ ++ D R + +
Sbjct: 156 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLK 215
Query: 182 CWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYE 241
WMAPE + Y ++D+WSFG+ E+ A S YP +K+ + G
Sbjct: 216 -WMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGA--SPYPGVKIDEEFCRRLKEGTRMR 271
Query: 242 RDKRFSKSFKELVTACLVKDPKKRPTAEKLMKH 274
+ + + C +P +RPT +L++H
Sbjct: 272 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 4/153 (2%)
Query: 122 ETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTP 181
+ K + +L IHRD+ A NIL+ +K+ DFG++ ++ D R + +
Sbjct: 199 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 258
Query: 182 CWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYE 241
WMAPE + Y ++D+WSFG+ E+ A S YP +K+ + G
Sbjct: 259 -WMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGA--SPYPGVKIDEEFCRRLKEGTRMR 314
Query: 242 RDKRFSKSFKELVTACLVKDPKKRPTAEKLMKH 274
+ + + C +P +RPT +L++H
Sbjct: 315 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 347
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 102/255 (40%), Gaps = 40/255 (15%)
Query: 61 REVQTMRVTNHPNVLRAHCSFTTGHCL-----WVVMPYMAGGSCLHIMKSAYPEGFEEPV 115
RE++ ++ H NV+ FT L ++ ++ G +I+K + +
Sbjct: 90 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDH 146
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
+ L+ + L+ L Y+H IHRD+K N+ ++ + +K+ DFG++ D
Sbjct: 147 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD------EMX 200
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 234
V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 201 GXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 260
Query: 235 PPG------LDYERDKRFSKSFKE-------------------LVTACLVKDPKKRPTAE 269
PG + E + + +S + L+ LV D KR TA
Sbjct: 261 TPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 320
Query: 270 KLMKHHFFKHARSND 284
+ + H +F D
Sbjct: 321 QALAHAYFAQYHDPD 335
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 114/269 (42%), Gaps = 27/269 (10%)
Query: 23 GEGVSATVYRALC----IPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLRAH 78
GEG VY+ + + ++ A+ + E+ D +E++ H N++
Sbjct: 31 GEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFD---QEIKVXAKCQHENLVELL 87
Query: 79 CSFTTGHCLWVVMPYMAGGSCL---HIMKSAYPEGFEEPVIATLLRETLKALVYLHFHGH 135
+ G L +V Y GS L + P + + + + +LH + H
Sbjct: 88 GFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXR--CKIAQGAANGINFLHENHH 145
Query: 136 IHRDVKAGNILIDSNGAIKLADFGVS-ACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLHG 194
IHRD+K+ NIL+D K++DFG++ A A SR VGT + APE ++
Sbjct: 146 IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSR--IVGTTAYXAPEALRG--E 201
Query: 195 YDFKADIWSFGITALELAHGHAPFSKYPPMKVLL----MTLQNAPPGLDY------ERDK 244
K+DI+SFG+ LE+ G ++ ++LL DY + D
Sbjct: 202 ITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKXNDADS 261
Query: 245 RFSKSFKELVTACLVKDPKKRPTAEKLMK 273
++ + + CL + KRP +K+ +
Sbjct: 262 TSVEAXYSVASQCLHEKKNKRPDIKKVQQ 290
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 4/153 (2%)
Query: 122 ETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTP 181
+ K + +L IHRD+ A NIL+ +K+ DFG++ ++ D R + +
Sbjct: 193 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 252
Query: 182 CWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYE 241
WMAPE + Y ++D+WSFG+ E+ A S YP +K+ + G
Sbjct: 253 -WMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGA--SPYPGVKIDEEFCRRLKEGTRMR 308
Query: 242 RDKRFSKSFKELVTACLVKDPKKRPTAEKLMKH 274
+ + + C +P +RPT +L++H
Sbjct: 309 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 341
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 91/197 (46%), Gaps = 9/197 (4%)
Query: 21 EVGEGVSATVYRALCIPLNE----IVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLR 76
++G+G +V PL + +VA+K L + D +RE+Q ++ + +++
Sbjct: 17 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRD-FQREIQILKALHSDFIVK 75
Query: 77 AH-CSFTTG-HCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHG 134
S+ G L +VM Y+ G CL + + + + K + YL
Sbjct: 76 YRGVSYGPGRQSLRLVMEYLPSG-CLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR 134
Query: 135 HIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLHG 194
+HRD+ A NIL++S +K+ADFG++ + D R W APE + +
Sbjct: 135 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSD-NI 193
Query: 195 YDFKADIWSFGITALEL 211
+ ++D+WSFG+ EL
Sbjct: 194 FSRQSDVWSFGVVLYEL 210
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 102/255 (40%), Gaps = 40/255 (15%)
Query: 61 REVQTMRVTNHPNVLRAHCSFTTGHCL-----WVVMPYMAGGSCLHIMKSAYPEGFEEPV 115
RE++ ++ H NV+ FT L ++ ++ G +I+K + +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDH 126
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
+ L+ + L+ L Y+H IHRD+K N+ ++ + +K+ FG++ D
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLARHTDD------EMT 180
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 234
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 235 PPG------LDYERDKRFSKSFKE-------------------LVTACLVKDPKKRPTAE 269
PG + E + + +S + L+ LV D KR TA
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 270 KLMKHHFFKHARSND 284
+ + H +F D
Sbjct: 301 QALAHAYFAQYHDPD 315
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 4/153 (2%)
Query: 122 ETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTP 181
+ K + +L IHRD+ A NIL+ +K+ DFG++ ++ D R + +
Sbjct: 156 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 215
Query: 182 CWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYE 241
WMAPE + Y ++D+WSFG+ E+ A S YP +K+ + G
Sbjct: 216 -WMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGA--SPYPGVKIDEEFCRRLKEGTRMR 271
Query: 242 RDKRFSKSFKELVTACLVKDPKKRPTAEKLMKH 274
+ + + C +P +RPT +L++H
Sbjct: 272 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 4/153 (2%)
Query: 122 ETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTP 181
+ K + +L IHRD+ A NIL+ +K+ DFG++ ++ D R + +
Sbjct: 147 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 206
Query: 182 CWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYE 241
WMAPE + Y ++D+WSFG+ E+ A S YP +K+ + G
Sbjct: 207 -WMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGA--SPYPGVKIDEEFCRRLKEGTRMR 262
Query: 242 RDKRFSKSFKELVTACLVKDPKKRPTAEKLMKH 274
+ + + C +P +RPT +L++H
Sbjct: 263 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 115/279 (41%), Gaps = 20/279 (7%)
Query: 3 LVVEKRFPVDAKDYRLYEEVGEGVSATVYR--ALCIPLNEI---VAIKVLDLEKCNNDLD 57
+ V + V + L E+G+G VY A I E VA+K ++ +
Sbjct: 7 VYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 66
Query: 58 GIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPE-----GFE 112
E M+ +V+R + G VVM MA G ++S PE G
Sbjct: 67 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 126
Query: 113 EPVIATLLR---ETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGD 169
P + +++ E + YL+ +HR++ A N ++ + +K+ DFG++ +++ D
Sbjct: 127 PPTLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYET-D 185
Query: 170 RQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAH-GHAPFSKYPPMKVLL 228
R + WMAPE ++ + +D+WSFG+ E+ P+ +VL
Sbjct: 186 YYRKGGKGLLPVRWMAPESLKD-GVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLK 244
Query: 229 MTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPT 267
+ G ++ + +L+ C +P RPT
Sbjct: 245 FVMD----GGYLDQPDNCPERVTDLMRMCWQFNPNMRPT 279
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 4/153 (2%)
Query: 122 ETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTP 181
+ K + +L IHRD+ A NIL+ +K+ DFG++ ++ D R + +
Sbjct: 147 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 206
Query: 182 CWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYE 241
WMAPE + Y ++D+WSFG+ E+ A S YP +K+ + G
Sbjct: 207 -WMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGA--SPYPGVKIDEEFCRRLKEGTRMR 262
Query: 242 RDKRFSKSFKELVTACLVKDPKKRPTAEKLMKH 274
+ + + C +P +RPT +L++H
Sbjct: 263 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 116/284 (40%), Gaps = 30/284 (10%)
Query: 9 FPV-DAKDYRLYEEVGEGVSATVYRALCIP--LNEIVAIKVLDLEKCNNDLDGIRREVQT 65
+PV D D + + +GEG V +A L AIK + +D E++
Sbjct: 16 YPVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEV 75
Query: 66 M-RVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIM-KSAYPEGFEEPVIATLLRET 123
+ ++ +HPN++ + L++ + Y G+ L + KS E IA T
Sbjct: 76 LCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 135
Query: 124 LKALVYLHFHG-------------HIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDR 170
L + LHF IHR++ A NIL+ N K+ADFG+S G
Sbjct: 136 LSSQQLLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLS-----RGQE 190
Query: 171 QRSRNTFVGTPC-WMAPEVMQQLHGYDFKADIWSFGITALELAH-GHAPFSKYPPMKVLL 228
+ T P WMA E + Y +D+WS+G+ E+ G P+ ++
Sbjct: 191 VYVKKTMGRLPVRWMAIESL-NYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL-- 247
Query: 229 MTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLM 272
+ P G E+ +L+ C + P +RP+ +++
Sbjct: 248 --YEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQIL 289
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 4/153 (2%)
Query: 122 ETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTP 181
+ K + +L IHRD+ A NIL+ +K+ DFG++ ++ D R + +
Sbjct: 152 QVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 182 CWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYE 241
WMAPE + Y ++D+WSFG+ E+ A S YP +K+ + G
Sbjct: 212 -WMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGA--SPYPGVKIDEEFXRRLKEGTRMR 267
Query: 242 RDKRFSKSFKELVTACLVKDPKKRPTAEKLMKH 274
+ + + C +P +RPT +L++H
Sbjct: 268 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 300
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 115/279 (41%), Gaps = 20/279 (7%)
Query: 3 LVVEKRFPVDAKDYRLYEEVGEGVSATVYR--ALCIPLNEI---VAIKVLDLEKCNNDLD 57
+ V + V + L E+G+G VY A I E VA+K ++ +
Sbjct: 6 VYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 58 GIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPE-----GFE 112
E M+ +V+R + G VVM MA G ++S PE G
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 113 EPVIATLLR---ETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGD 169
P + +++ E + YL+ +HR++ A N ++ + +K+ DFG++ +++ D
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYET-D 184
Query: 170 RQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAH-GHAPFSKYPPMKVLL 228
R + WMAPE ++ + +D+WSFG+ E+ P+ +VL
Sbjct: 185 YYRKGGKGLLPVRWMAPESLKD-GVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLK 243
Query: 229 MTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPT 267
+ G ++ + +L+ C +P RPT
Sbjct: 244 FVMD----GGYLDQPDNCPERVTDLMRMCWQFNPNMRPT 278
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 113/275 (41%), Gaps = 38/275 (13%)
Query: 17 RLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMR-VTNHPNVL 75
R+ + EG A VY A + A+K L L I +EV M+ ++ HPN++
Sbjct: 31 RVRRVLAEGGFAFVYEAQDVGSGREYALKRL-LSNEEEKNRAIIQEVCFMKKLSGHPNIV 89
Query: 76 RAHCSFT--------TGHCLWVVMPYMAGGSCLHIMKSAYPEG-FEEPVIATLLRETLKA 126
+ CS TG ++++ + G + +K G + + +T +A
Sbjct: 90 Q-FCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRA 148
Query: 127 LVYLHFHGH--IHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDR----QR-------- 172
+ ++H IHRD+K N+L+ + G IKL DFG + + D QR
Sbjct: 149 VQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEI 208
Query: 173 SRNTFVGTPCWMAPEVMQQLHGYDF--KADIWSFGITALELAHGHAPFSKYPPMKVLLMT 230
+RNT TP + PE++ + K DIW+ G L PF ++++
Sbjct: 209 TRNT---TPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIVNGK 265
Query: 231 LQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKR 265
P Y F L+ A L +P++R
Sbjct: 266 YSIPPHDTQY-------TVFHSLIRAMLQVNPEER 293
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 102/255 (40%), Gaps = 40/255 (15%)
Query: 61 REVQTMRVTNHPNVLRAHCSFTTGHCL-----WVVMPYMAGGSCLHIMKSAYPEGFEEPV 115
RE++ ++ H NV+ FT L ++ ++ G +I+K + +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDH 126
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
+ L+ + L+ L Y+H IHRD+K N+ ++ + +K+ D G++ D
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLARHTDD------EMT 180
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 234
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 235 PPG------LDYERDKRFSKSFKE-------------------LVTACLVKDPKKRPTAE 269
PG + E + + +S + L+ LV D KR TA
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 270 KLMKHHFFKHARSND 284
+ + H +F D
Sbjct: 301 QALAHAYFAQYHDPD 315
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 91/197 (46%), Gaps = 9/197 (4%)
Query: 21 EVGEGVSATVYRALCIPLNE----IVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLR 76
++G+G +V PL + +VA+K L + D +RE+Q ++ + +++
Sbjct: 18 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRD-FQREIQILKALHSDFIVK 76
Query: 77 AH-CSFTTG-HCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHG 134
S+ G L +VM Y+ G CL + + + + K + YL
Sbjct: 77 YRGVSYGPGRQSLRLVMEYLPSG-CLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR 135
Query: 135 HIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLHG 194
+HRD+ A NIL++S +K+ADFG++ + D R W APE + +
Sbjct: 136 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSD-NI 194
Query: 195 YDFKADIWSFGITALEL 211
+ ++D+WSFG+ EL
Sbjct: 195 FSRQSDVWSFGVVLYEL 211
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 102/255 (40%), Gaps = 40/255 (15%)
Query: 61 REVQTMRVTNHPNVLRAHCSFTTGHCL-----WVVMPYMAGGSCLHIMKSAYPEGFEEPV 115
RE++ ++ H NV+ FT L ++ ++ G +I+K + +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDH 126
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
+ L+ + L+ L Y+H IHRD+K N+ ++ + +K+ D G++ D
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLARHTDD------EMT 180
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 234
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 235 PPG------LDYERDKRFSKSFKE-------------------LVTACLVKDPKKRPTAE 269
PG + E + + +S + L+ LV D KR TA
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 270 KLMKHHFFKHARSND 284
+ + H +F D
Sbjct: 301 QALAHAYFAQYHDPD 315
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 101/255 (39%), Gaps = 40/255 (15%)
Query: 61 REVQTMRVTNHPNVLRAHCSFTTGHCL-----WVVMPYMAGGSCLHIMKSAYPEGFEEPV 115
RE++ ++ H NV+ FT L ++ ++ G +I+K + +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDH 126
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
+ L+ + L+ L Y+H IHRD+K N+ ++ + +K+ DF + A
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF------YLARHTDDEMT 180
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 234
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 235 PPG------LDYERDKRFSKSFKE-------------------LVTACLVKDPKKRPTAE 269
PG + E + + +S + L+ LV D KR TA
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 270 KLMKHHFFKHARSND 284
+ + H +F D
Sbjct: 301 QALAHAYFAQYHDPD 315
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 91/197 (46%), Gaps = 9/197 (4%)
Query: 21 EVGEGVSATVYRALCIPLNE----IVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLR 76
++G+G +V PL + +VA+K L + D +RE+Q ++ + +++
Sbjct: 30 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRD-FQREIQILKALHSDFIVK 88
Query: 77 AH-CSFTTG-HCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHG 134
S+ G L +VM Y+ G CL + + + + K + YL
Sbjct: 89 YRGVSYGPGRQSLRLVMEYLPSG-CLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR 147
Query: 135 HIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLHG 194
+HRD+ A NIL++S +K+ADFG++ + D R W APE + +
Sbjct: 148 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSD-NI 206
Query: 195 YDFKADIWSFGITALEL 211
+ ++D+WSFG+ EL
Sbjct: 207 FSRQSDVWSFGVVLYEL 223
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 116/283 (40%), Gaps = 14/283 (4%)
Query: 11 VDAKDYRLYEEVGEGVSATVYRA-LCIPLNEIV--AIKVL--DLEKCNNDLDGIRREVQT 65
+ KD RL E++G+G V R P + V A+K L D+ +D REV
Sbjct: 15 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 74
Query: 66 MRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
M +H N++R + T + +V GS L ++ + F ++ + +
Sbjct: 75 MHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRK-HQGHFLLGTLSRYAVQVAE 132
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
+ YL IHRD+ A N+L+ + +K+ DFG+ + D + W A
Sbjct: 133 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCA 192
Query: 186 PEVMQQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDK 244
PE ++ + +D W FG+T E+ +G P+ ++L + G R +
Sbjct: 193 PESLKT-RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKE---GERLPRPE 248
Query: 245 RFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFKHARSNDFLA 287
+ ++ C P+ RPT L F A+ D A
Sbjct: 249 DCPQDIYNVMVQCWAHKPEDRPTFVAL--RDFLLEAQPTDMRA 289
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 111/274 (40%), Gaps = 28/274 (10%)
Query: 11 VDAKDYRLYEEVGEGVSATVYRALCI-------PLNEIVAIKVLDLEKCN--NDLDGIRR 61
V K+ L +G G VY PL VA+K L E C+ ++LD +
Sbjct: 68 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQ--VAVKTLP-EVCSEQDELDFLM- 123
Query: 62 EVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATL-- 119
E + NH N++R ++++ MAGG ++ P + +A L
Sbjct: 124 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 183
Query: 120 ---LRETLKALVYLHFHGHIHRDVKAGNILIDSNG---AIKLADFGVSACMFDAGDRQRS 173
R+ YL + IHRD+ A N L+ G K+ DFG++ ++ AG ++
Sbjct: 184 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKG 243
Query: 174 RNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQ 232
+ WM PE + + K D WSFG+ E+ + G+ P+ P K L+
Sbjct: 244 GCAMLPVK-WMPPEAFME-GIFTSKTDTWSFGVLLWEIFSLGYMPY----PSKSNQEVLE 297
Query: 233 NAPPGLDYERDKRFSKSFKELVTACLVKDPKKRP 266
G + K ++T C P+ RP
Sbjct: 298 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRP 331
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 107/240 (44%), Gaps = 15/240 (6%)
Query: 42 VAIKVLDLEKCNNDLDGIRREVQTM-RVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL 100
VA+K+L ++ + + E++ M + H N++ + T G + V+ Y G L
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 138
Query: 101 HIMKSAYPEGFEEPVIATL-LRETL-------KALVYLHFHGHIHRDVKAGNILIDSNGA 152
+ ++ ++ L LR+ L + + +L IHRDV A N+L+ +
Sbjct: 139 NFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHV 198
Query: 153 IKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALEL- 211
K+ DFG++ + + + N + WMAPE + Y ++D+WS+GI E+
Sbjct: 199 AKIGDFGLARDIMNDSNYIVKGNARLPVK-WMAPESIFDCV-YTVQSDVWSYGILLWEIF 256
Query: 212 AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKL 271
+ G P YP + V + G + K+ ++ AC +P RPT +++
Sbjct: 257 SLGLNP---YPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 313
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 111/274 (40%), Gaps = 28/274 (10%)
Query: 11 VDAKDYRLYEEVGEGVSATVYRALCI-------PLNEIVAIKVLDLEKCN--NDLDGIRR 61
V K+ L +G G VY PL VA+K L E C+ ++LD +
Sbjct: 45 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQ--VAVKTLP-EVCSEQDELDFLM- 100
Query: 62 EVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATL-- 119
E + NH N++R ++++ MAGG ++ P + +A L
Sbjct: 101 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 160
Query: 120 ---LRETLKALVYLHFHGHIHRDVKAGNILIDSNG---AIKLADFGVSACMFDAGDRQRS 173
R+ YL + IHRD+ A N L+ G K+ DFG++ ++ AG ++
Sbjct: 161 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKG 220
Query: 174 RNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQ 232
+ WM PE + + K D WSFG+ E+ + G+ P+ P K L+
Sbjct: 221 GCAMLPVK-WMPPEAFME-GIFTSKTDTWSFGVLLWEIFSLGYMPY----PSKSNQEVLE 274
Query: 233 NAPPGLDYERDKRFSKSFKELVTACLVKDPKKRP 266
G + K ++T C P+ RP
Sbjct: 275 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRP 308
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 114/273 (41%), Gaps = 27/273 (9%)
Query: 20 EEVGEGVSATVYRALCIPLNEIVAIKVLD--LEKCNNDLDGIRREVQTMRVTNHPNVLRA 77
E++G G +V++ + I AIK L ++ + +R + H +V+R
Sbjct: 13 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRY 72
Query: 78 HCSFTTGHCLWVVMPYMAGGSCLHIMKSAYP--EGFEEPVIATLLRETLKALVYLHFHGH 135
++ + + Y GGS + Y F+E + LL + + L Y+H
Sbjct: 73 FSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSL 132
Query: 136 IHRDVKAGNILIDSNGAIKLA-------DFGVSACMFDAGD-----RQRSRNTFVGTPCW 183
+H D+K NI I A D+ + MF GD R S G +
Sbjct: 133 VHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDSRF 192
Query: 184 MAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPM--KVLLMTLQNAPPGLDYE 241
+A EV+Q+ + + KADI++ +T + A G P + ++ L P L
Sbjct: 193 LANEVLQENYTHLPKADIFALALTVVXAA-GAEPLPRNGDQWHEIRQGRLPRIPQVL--- 248
Query: 242 RDKRFSKSFKELVTACLVKDPKKRPTAEKLMKH 274
S+ F EL+ + DP++RP+A L+KH
Sbjct: 249 -----SQEFTELLKVMIHPDPERRPSAMALVKH 276
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 102/255 (40%), Gaps = 40/255 (15%)
Query: 61 REVQTMRVTNHPNVLRAHCSFTTGHCL-----WVVMPYMAGGSCLHIMKSAYPEGFEEPV 115
RE++ ++ H NV+ FT L ++ ++ G +I+K + +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDH 126
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
+ L+ + L+ L Y+H IHRD+K N+ ++ + +K+ D G++ D
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLARHTDD------EMT 180
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQ-NA 234
+V T + APE+M Y+ DIWS G EL G F + L + L+
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 235 PPG------LDYERDKRFSKSFKE-------------------LVTACLVKDPKKRPTAE 269
PG + E + + +S + L+ LV D KR TA
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 270 KLMKHHFFKHARSND 284
+ + H +F D
Sbjct: 301 QALAHAYFAQYHDPD 315
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 116/283 (40%), Gaps = 14/283 (4%)
Query: 11 VDAKDYRLYEEVGEGVSATVYRA-LCIPLNEIV--AIKVL--DLEKCNNDLDGIRREVQT 65
+ KD RL E++G+G V R P + V A+K L D+ +D REV
Sbjct: 9 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 68
Query: 66 MRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
M +H N++R + T + +V GS L ++ + F ++ + +
Sbjct: 69 MHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRK-HQGHFLLGTLSRYAVQVAE 126
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
+ YL IHRD+ A N+L+ + +K+ DFG+ + D + W A
Sbjct: 127 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 186
Query: 186 PEVMQQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDK 244
PE ++ + +D W FG+T E+ +G P+ ++L + G R +
Sbjct: 187 PESLKT-RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKE---GERLPRPE 242
Query: 245 RFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFKHARSNDFLA 287
+ ++ C P+ RPT L F A+ D A
Sbjct: 243 DCPQDIYNVMVQCWAHKPEDRPTFVAL--RDFLLEAQPTDMRA 283
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 116/283 (40%), Gaps = 14/283 (4%)
Query: 11 VDAKDYRLYEEVGEGVSATVYRA-LCIPLNEIV--AIKVL--DLEKCNNDLDGIRREVQT 65
+ KD RL E++G+G V R P + V A+K L D+ +D REV
Sbjct: 15 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 74
Query: 66 MRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
M +H N++R + T + +V GS L ++ + F ++ + +
Sbjct: 75 MHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRK-HQGHFLLGTLSRYAVQVAE 132
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
+ YL IHRD+ A N+L+ + +K+ DFG+ + D + W A
Sbjct: 133 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 192
Query: 186 PEVMQQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDK 244
PE ++ + +D W FG+T E+ +G P+ ++L + G R +
Sbjct: 193 PESLKT-RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKE---GERLPRPE 248
Query: 245 RFSKSFKELVTACLVKDPKKRPTAEKLMKHHFFKHARSNDFLA 287
+ ++ C P+ RPT L F A+ D A
Sbjct: 249 DCPQDIYNVMVQCWAHKPEDRPTFVAL--RDFLLEAQPTDMRA 289
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 91/197 (46%), Gaps = 9/197 (4%)
Query: 21 EVGEGVSATVYRALCIPLNE----IVAIKVLDLEKCNNDLDGIRREVQTMRVTNHPNVLR 76
++G+G +V PL + +VA+K L + D +RE+Q ++ + +++
Sbjct: 14 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRD-FQREIQILKALHSDFIVK 72
Query: 77 AH-CSFTTGHC-LWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKALVYLHFHG 134
S+ G L +VM Y+ G CL + + + + K + YL
Sbjct: 73 YRGVSYGPGRPELRLVMEYLPSG-CLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR 131
Query: 135 HIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLHG 194
+HRD+ A NIL++S +K+ADFG++ + D R W APE + +
Sbjct: 132 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSD-NI 190
Query: 195 YDFKADIWSFGITALEL 211
+ ++D+WSFG+ EL
Sbjct: 191 FSRQSDVWSFGVVLYEL 207
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 125/294 (42%), Gaps = 30/294 (10%)
Query: 7 KRFPVDAKDY-------RLYEEVGEGVSATVYRALCIPLNEI-----VAIKVLDLEKCNN 54
+R P DA + +L + +G G V A +++ VA+K+L ++
Sbjct: 15 ERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHS 74
Query: 55 DLDGIRREVQTM-RVTNHPNVLRAHCSFTT-GHCLWVVMPYMAGGSCLHIMKSA----YP 108
+ + E++ + + +H NV+ + T G L V++ + G+ ++S P
Sbjct: 75 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 134
Query: 109 EGFEEPVIATLLRETL--------KALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGV 160
E+ L E L K + +L IHRD+ A NIL+ +K+ DFG+
Sbjct: 135 YKPEDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGL 194
Query: 161 SACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSK 220
+ + D R + + WMAPE + Y ++D+WSFG+ E+ A S
Sbjct: 195 ARDIXKDPDXVRKGDARLPLK-WMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGA--SP 250
Query: 221 YPPMKVLLMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKLMKH 274
YP +K+ + G + + + C +P +RPT +L++H
Sbjct: 251 YPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 107/240 (44%), Gaps = 15/240 (6%)
Query: 42 VAIKVLDLEKCNNDLDGIRREVQTM-RVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL 100
VA+K+L ++ + + E++ M + H N++ + T G + V+ Y G L
Sbjct: 71 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 130
Query: 101 HIMKSAYPEGFEEPVIATL-LRETL-------KALVYLHFHGHIHRDVKAGNILIDSNGA 152
+ ++ ++ L LR+ L + + +L IHRDV A N+L+ +
Sbjct: 131 NFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHV 190
Query: 153 IKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALEL- 211
K+ DFG++ + + + N + WMAPE + Y ++D+WS+GI E+
Sbjct: 191 AKIGDFGLARDIMNDSNYIVKGNARLPVK-WMAPESIFDCV-YTVQSDVWSYGILLWEIF 248
Query: 212 AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPTAEKL 271
+ G P YP + V + G + K+ ++ AC +P RPT +++
Sbjct: 249 SLGLNP---YPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 305
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 104/237 (43%), Gaps = 28/237 (11%)
Query: 17 RLYEEVGEGVSATVYRA-LCIPL----NEIVAIKVLDLEKCNNDL-DGIRREVQTMRVTN 70
R EE+GE VY+ L P + VAIK L +K L + R E
Sbjct: 29 RFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLK-DKAEGPLREEFRHEAMLRARLQ 87
Query: 71 HPNVLRAHCSFTTGHCLWVVMPYMAGGSCLH---IMKSAYPE------------GFEEPV 115
HPNV+ T L ++ Y + G LH +M+S + + E P
Sbjct: 88 HPNVVCLLGVVTKDQPLSMIFSYCSHGD-LHEFLVMRSPHSDVGSTDDDRTVKSALEPPD 146
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
L+ + + YL H +H+D+ N+L+ +K++D G+ ++ A + N
Sbjct: 147 FVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGN 206
Query: 176 TFVGTPCWMAPEVMQQLHG-YDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMT 230
+ + WMAPE + ++G + +DIWS+G+ E+ ++G P+ Y V+ M
Sbjct: 207 SLLPIR-WMAPEAI--MYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMI 260
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 110/253 (43%), Gaps = 28/253 (11%)
Query: 42 VAIKVLDLEKCNNDLDGIRREVQTM-RVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL 100
VA+K+L ++ + + E++ M + H N++ + T G + V+ Y G L
Sbjct: 64 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 123
Query: 101 HIMKSAY-------------PEGFEEPVIATL-LRETL-------KALVYLHFHGHIHRD 139
+ ++ PEG ++ L LR+ L + + +L IHRD
Sbjct: 124 NFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRD 183
Query: 140 VKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKA 199
V A N+L+ + K+ DFG++ + + + N + WMAPE + Y ++
Sbjct: 184 VAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK-WMAPESIFDCV-YTVQS 241
Query: 200 DIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKELVTACL 258
D+WS+GI E+ + G P YP + V + G + K+ ++ AC
Sbjct: 242 DVWSYGILLWEIFSLGLNP---YPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACW 298
Query: 259 VKDPKKRPTAEKL 271
+P RPT +++
Sbjct: 299 ALEPTHRPTFQQI 311
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 106/244 (43%), Gaps = 19/244 (7%)
Query: 42 VAIKVLDLEKCNNDLDGIRREVQTM-RVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCL 100
VA+K+L ++ + + E++ M + H N++ + T G + V+ Y G L
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 138
Query: 101 HIMKSAYPEGFEEPVIAT---------LLR---ETLKALVYLHFHGHIHRDVKAGNILID 148
+ ++ +P A LL + + + +L IHRDV A N+L+
Sbjct: 139 NFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLT 198
Query: 149 SNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITA 208
+ K+ DFG++ + + + N + WMAPE + Y ++D+WS+GI
Sbjct: 199 NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK-WMAPESIFDC-VYTVQSDVWSYGILL 256
Query: 209 LEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPT 267
E+ + G P YP + V + G + K+ ++ AC +P RPT
Sbjct: 257 WEIFSLGLNP---YPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPT 313
Query: 268 AEKL 271
+++
Sbjct: 314 FQQI 317
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 71/164 (43%), Gaps = 14/164 (8%)
Query: 61 REVQTMRVTNHPNVLRAHCSFTT--GHCLWVVMPYMAGGSCLHIMK-------SAYPEGF 111
RE+ +R HPNV+ F + +W++ Y A HI+K + P
Sbjct: 67 REIALLRELKHPNVISLQKVFLSHADRKVWLLFDY-AEHDLWHIIKFHRASKANKKPVQL 125
Query: 112 EEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILI----DSNGAIKLADFGVSACMFDA 167
++ +LL + L + YLH + +HRD+K NIL+ G +K+AD G +
Sbjct: 126 PRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSP 185
Query: 168 GDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALEL 211
+ V T + APE++ Y DIW+ G EL
Sbjct: 186 LKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAEL 229
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 48/103 (46%)
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
I L + L+ L Y+H +HRD+K N+L+++ +K+ DFG++ D
Sbjct: 130 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLX 189
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
V T + APE+M GY DIWS G E+ F
Sbjct: 190 EXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 48/103 (46%)
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
I L + L+ L Y+H +HRD+K N+L+++ +K+ DFG++ D
Sbjct: 131 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLX 190
Query: 176 TFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
V T + APE+M GY DIWS G E+ F
Sbjct: 191 EXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 233
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 114/273 (41%), Gaps = 27/273 (9%)
Query: 20 EEVGEGVSATVYRALCIPLNEIVAIKVLD--LEKCNNDLDGIRREVQTMRVTNHPNVLRA 77
E++G G +V++ + I AIK L ++ + +R + H +V+R
Sbjct: 15 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRY 74
Query: 78 HCSFTTGHCLWVVMPYMAGGSCLHIMKSAYP--EGFEEPVIATLLRETLKALVYLHFHGH 135
++ + + Y GGS + Y F+E + LL + + L Y+H
Sbjct: 75 FSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSL 134
Query: 136 IHRDVKAGNILIDSNGAIKLA-------DFGVSACMFDAGD-----RQRSRNTFVGTPCW 183
+H D+K NI I A D+ + MF GD R S G +
Sbjct: 135 VHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDSRF 194
Query: 184 MAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPM--KVLLMTLQNAPPGLDYE 241
+A EV+Q+ + + KADI++ +T + A G P + ++ L P L
Sbjct: 195 LANEVLQENYTHLPKADIFALALTVV-CAAGAEPLPRNGDQWHEIRQGRLPRIPQVL--- 250
Query: 242 RDKRFSKSFKELVTACLVKDPKKRPTAEKLMKH 274
S+ F EL+ + DP++RP+A L+KH
Sbjct: 251 -----SQEFTELLKVMIHPDPERRPSAMALVKH 278
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 104/237 (43%), Gaps = 28/237 (11%)
Query: 17 RLYEEVGEGVSATVYRA-LCIPL----NEIVAIKVLDLEKCNNDL-DGIRREVQTMRVTN 70
R EE+GE VY+ L P + VAIK L +K L + R E
Sbjct: 12 RFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLK-DKAEGPLREEFRHEAMLRARLQ 70
Query: 71 HPNVLRAHCSFTTGHCLWVVMPYMAGGSCLH---IMKSAYPE------------GFEEPV 115
HPNV+ T L ++ Y + G LH +M+S + + E P
Sbjct: 71 HPNVVCLLGVVTKDQPLSMIFSYCSHGD-LHEFLVMRSPHSDVGSTDDDRTVKSALEPPD 129
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRN 175
L+ + + YL H +H+D+ N+L+ +K++D G+ ++ A + N
Sbjct: 130 FVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGN 189
Query: 176 TFVGTPCWMAPEVMQQLHG-YDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMT 230
+ + WMAPE + ++G + +DIWS+G+ E+ ++G P+ Y V+ M
Sbjct: 190 SLLPIR-WMAPEAI--MYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMI 243
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 120/306 (39%), Gaps = 62/306 (20%)
Query: 13 AKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVT--N 70
A+D L E VG+G V+R E VA+K+ + D RE +
Sbjct: 7 ARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFS----SRDEKSWFRETELYNTVMLR 60
Query: 71 HPNVLRAHCS-FTTGHC---LWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKA 126
H N+L S T+ H LW++ Y GS ++ + + LR L
Sbjct: 61 HENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLD------TVSCLRIVLSI 114
Query: 127 LVYL-HFHGHI----------HRDVKAGNILIDSNGAIKLADFGV------SACMFDAGD 169
L H H I HRD+K+ NIL+ NG +AD G+ S D G+
Sbjct: 115 ASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGN 174
Query: 170 RQRSRNTFVGTPCWMAPEVMQ---QLHGYDF--KADIWSFGITALELAHGHA-------- 216
R VGT +MAPEV+ Q+ +D + DIW+FG+ E+A
Sbjct: 175 NPR-----VGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDY 229
Query: 217 --PFSKYPP-------MKVLLMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPT 267
PF P M+ ++ Q P + S +L+ C ++P R T
Sbjct: 230 KPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLT 289
Query: 268 AEKLMK 273
A ++ K
Sbjct: 290 ALRIKK 295
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 65/152 (42%), Gaps = 17/152 (11%)
Query: 122 ETLKALVYLHFHGHIHRDVKAGNILID-SNGAIKLADFGVSACMFDAGDRQRSRNTFVGT 180
+ + A+ + H G +HRD+K NILID G KL DFG A + D F GT
Sbjct: 147 QVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHD-----EPYTDFDGT 201
Query: 181 PCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDY 240
+ PE + + + A +WS GI ++ G PF + ++L L
Sbjct: 202 RVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERD--QEILEAELHFP------ 253
Query: 241 ERDKRFSKSFKELVTACLVKDPKKRPTAEKLM 272
S L+ CL P RP+ E+++
Sbjct: 254 ---AHVSPDCCALIRRCLAPKPSSRPSLEEIL 282
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 114/273 (41%), Gaps = 27/273 (9%)
Query: 20 EEVGEGVSATVYRALCIPLNEIVAIKVLD--LEKCNNDLDGIRREVQTMRVTNHPNVLRA 77
E++G G +V++ + I AIK L ++ + +R + H +V+R
Sbjct: 15 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRY 74
Query: 78 HCSFTTGHCLWVVMPYMAGGSCLHIMKSAYP--EGFEEPVIATLLRETLKALVYLHFHGH 135
++ + + Y GGS + Y F+E + LL + + L Y+H
Sbjct: 75 FSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSL 134
Query: 136 IHRDVKAGNILIDSNGAIKLA-------DFGVSACMFDAGD-----RQRSRNTFVGTPCW 183
+H D+K NI I A D+ + MF GD R S G +
Sbjct: 135 VHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDSRF 194
Query: 184 MAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPM--KVLLMTLQNAPPGLDYE 241
+A EV+Q+ + + KADI++ +T + A G P + ++ L P L
Sbjct: 195 LANEVLQENYTHLPKADIFALALTVV-CAAGAEPLPRNGDQWHEIRQGRLPRIPQVL--- 250
Query: 242 RDKRFSKSFKELVTACLVKDPKKRPTAEKLMKH 274
S+ F EL+ + DP++RP+A L+KH
Sbjct: 251 -----SQEFTELLKVMIHPDPERRPSAMALVKH 278
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 111/241 (46%), Gaps = 24/241 (9%)
Query: 42 VAIKVLDLEK-CNNDLDGIRREVQTMRVTNHPNV-------LRAHCSFTTGHCLWVVMPY 93
VA+K+L + ++D++ RE M+ +HP+V LR+ + V++P+
Sbjct: 54 VAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPM-VILPF 112
Query: 94 MAGGSCLHIMKSAYPEGFEEPV---IATLLR---ETLKALVYLHFHGHIHRDVKAGNILI 147
M G LH A G E P + TL+R + + YL IHRD+ A N ++
Sbjct: 113 MKHGD-LHAFLLASRIG-ENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCML 170
Query: 148 DSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGIT 207
+ + +ADFG+S ++ +GD R W+A E + + Y +D+W+FG+T
Sbjct: 171 AEDMTVCVADFGLSRKIY-SGDYYRQGCASKLPVKWLALESLAD-NLYTVHSDVWAFGVT 228
Query: 208 ALE-LAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRP 266
E + G P++ ++ + G ++ + +L+ C DPK+RP
Sbjct: 229 MWEIMTRGQTPYAGIENAEIYNYLIG----GNRLKQPPECMEEVYDLMYQCWSADPKQRP 284
Query: 267 T 267
+
Sbjct: 285 S 285
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 4/153 (2%)
Query: 122 ETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTP 181
+ K + +L IHRD+ A NIL+ +K+ DFG++ + D R + +
Sbjct: 156 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLK 215
Query: 182 CWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYE 241
WMAPE + Y ++D+WSFG+ E+ A S YP +K+ + G
Sbjct: 216 -WMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGA--SPYPGVKIDEEFCRRLKEGTRMR 271
Query: 242 RDKRFSKSFKELVTACLVKDPKKRPTAEKLMKH 274
+ + + C +P +RPT +L++H
Sbjct: 272 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 4/153 (2%)
Query: 122 ETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTP 181
+ K + +L IHRD+ A NIL+ +K+ DFG++ + D R + +
Sbjct: 156 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLK 215
Query: 182 CWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYE 241
WMAPE + Y ++D+WSFG+ E+ A S YP +K+ + G
Sbjct: 216 -WMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGA--SPYPGVKIDEEFCRRLKEGTRMR 271
Query: 242 RDKRFSKSFKELVTACLVKDPKKRPTAEKLMKH 274
+ + + C +P +RPT +L++H
Sbjct: 272 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 114/273 (41%), Gaps = 27/273 (9%)
Query: 20 EEVGEGVSATVYRALCIPLNEIVAIKVLD--LEKCNNDLDGIRREVQTMRVTNHPNVLRA 77
E++G G +V++ + I AIK L ++ + +R + H +V+R
Sbjct: 17 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRY 76
Query: 78 HCSFTTGHCLWVVMPYMAGGSCLHIMKSAYP--EGFEEPVIATLLRETLKALVYLHFHGH 135
++ + + Y GGS + Y F+E + LL + + L Y+H
Sbjct: 77 FSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSL 136
Query: 136 IHRDVKAGNILIDSNGAIKLA-------DFGVSACMFDAGD-----RQRSRNTFVGTPCW 183
+H D+K NI I A D+ + MF GD R S G +
Sbjct: 137 VHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDSRF 196
Query: 184 MAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPM--KVLLMTLQNAPPGLDYE 241
+A EV+Q+ + + KADI++ +T + A G P + ++ L P L
Sbjct: 197 LANEVLQENYTHLPKADIFALALTVV-CAAGAEPLPRNGDQWHEIRQGRLPRIPQVL--- 252
Query: 242 RDKRFSKSFKELVTACLVKDPKKRPTAEKLMKH 274
S+ F EL+ + DP++RP+A L+KH
Sbjct: 253 -----SQEFTELLKVMIHPDPERRPSAMALVKH 280
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 4/153 (2%)
Query: 122 ETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTP 181
+ K + +L IHRD+ A NIL+ +K+ DFG++ + D R + +
Sbjct: 147 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLK 206
Query: 182 CWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYE 241
WMAPE + Y ++D+WSFG+ E+ A S YP +K+ + G
Sbjct: 207 -WMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGA--SPYPGVKIDEEFCRRLKEGTRMR 262
Query: 242 RDKRFSKSFKELVTACLVKDPKKRPTAEKLMKH 274
+ + + C +P +RPT +L++H
Sbjct: 263 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 4/153 (2%)
Query: 122 ETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTP 181
+ K + +L IHRD+ A NIL+ +K+ DFG++ + D R + +
Sbjct: 147 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLK 206
Query: 182 CWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYE 241
WMAPE + Y ++D+WSFG+ E+ A S YP +K+ + G
Sbjct: 207 -WMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGA--SPYPGVKIDEEFCRRLKEGTRMR 262
Query: 242 RDKRFSKSFKELVTACLVKDPKKRPTAEKLMKH 274
+ + + C +P +RPT +L++H
Sbjct: 263 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 110/263 (41%), Gaps = 12/263 (4%)
Query: 11 VDAKDYRLYEEVGEGVSATVYRA-LCIPLNEIV--AIKVL--DLEKCNNDLDGIRREVQT 65
+ KD RL E++G+G V R P + V A+K L D+ +D REV
Sbjct: 9 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 68
Query: 66 MRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
M +H N++R + T + +V GS L ++ + F ++ + +
Sbjct: 69 MHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRK-HQGHFLLGTLSRYAVQVAE 126
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
+ YL IHRD+ A N+L+ + +K+ DFG+ + D + W A
Sbjct: 127 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 186
Query: 186 PEVMQQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDK 244
PE ++ + +D W FG+T E+ +G P+ ++L + G R +
Sbjct: 187 PESLKT-RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKE---GERLPRPE 242
Query: 245 RFSKSFKELVTACLVKDPKKRPT 267
+ ++ C P+ RPT
Sbjct: 243 DCPQDIYNVMVQCWAHKPEDRPT 265
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 101/246 (41%), Gaps = 24/246 (9%)
Query: 3 LVVEKRFPVDAKDYRLYEEV---------GEGVSATVYRALCIPLNEIVAIKVLDLEKCN 53
L+ EK PVD Y EEV G G V+R A+K + LE
Sbjct: 76 LLTEKLKPVD---YEYREEVHWATHQLRLGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFR 132
Query: 54 NDLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEE 113
+ E+ P ++ + + G + + M + GGS ++K E
Sbjct: 133 AE------ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQ--GCLPE 184
Query: 114 PVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGA-IKLADFGVSACMF--DAGDR 170
L + L+ L YLH +H DVKA N+L+ S+G+ L DFG + C+ G
Sbjct: 185 DRALYYLGQALEGLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKS 244
Query: 171 QRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMT 230
+ + GT MAPEV+ D K D+WS L + +G P++++ + L
Sbjct: 245 LLTGDYIPGTETHMAPEVVLG-RSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLKI 303
Query: 231 LQNAPP 236
PP
Sbjct: 304 ASEPPP 309
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 110/263 (41%), Gaps = 12/263 (4%)
Query: 11 VDAKDYRLYEEVGEGVSATVYRA-LCIPLNEIV--AIKVL--DLEKCNNDLDGIRREVQT 65
+ KD RL E++G+G V R P + V A+K L D+ +D REV
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 66 MRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
M +H N++R + T + +V GS L ++ + F ++ + +
Sbjct: 65 MHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRK-HQGHFLLGTLSRYAVQVAE 122
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
+ YL IHRD+ A N+L+ + +K+ DFG+ + D + W A
Sbjct: 123 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCA 182
Query: 186 PEVMQQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDK 244
PE ++ + +D W FG+T E+ +G P+ ++L + G R +
Sbjct: 183 PESLKT-RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKE---GERLPRPE 238
Query: 245 RFSKSFKELVTACLVKDPKKRPT 267
+ ++ C P+ RPT
Sbjct: 239 DCPQDIYNVMVQCWAHKPEDRPT 261
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 117/283 (41%), Gaps = 41/283 (14%)
Query: 8 RFPVDAKDYRLYEEVGEGVSATVYRALCI-----PLNEIVAIKVLDLEKCNNDLDGIRRE 62
++ + +D L +GEG VY + +N VA+K + ++ + E
Sbjct: 18 QYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKIN--VAVKTCKKDCTLDNKEKFMSE 75
Query: 63 VQTMRVTNHPNVLRAHCSFTTGHCLWVVM---PYMAGGSCLHIMKSAYPEGFEEPVIATL 119
M+ +HP++++ W++M PY G L K++ + TL
Sbjct: 76 AVIMKNLDHPHIVKL-IGIIEEEPTWIIMELYPYGELGHYLERNKNSLK-------VLTL 127
Query: 120 LRETL---KALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNT 176
+ +L KA+ YL +HRD+ NIL+ S +KL DFG+S + D D ++ T
Sbjct: 128 VLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDE-DYYKASVT 186
Query: 177 FVGTPCWMAPEVMQQLHGYDFKADIWSFGITALE-LAHGHAPFSKYPPMKVLLMTLQNAP 235
+ WM+PE + + +D+W F + E L+ G PF L+N
Sbjct: 187 RLPIK-WMSPESI-NFRRFTTASDVWMFAVCMWEILSFGKQPF----------FWLENKD 234
Query: 236 PGLDYERDKRFSKS------FKELVTACLVKDPKKRPTAEKLM 272
E+ R K L+T C DP RP +L+
Sbjct: 235 VIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELV 277
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 17/119 (14%)
Query: 112 EEPVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQ 171
E V + + +A+ +LH G +HRD+K NI + +K+ DFG+ M + Q
Sbjct: 116 ERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQ 175
Query: 172 R--------SRNT-FVGTPCWMAPEVMQQLHG--YDFKADIWSFGITALELAHGHAPFS 219
+R+T VGT +M+PE Q+HG Y K DI+S G+ EL + PFS
Sbjct: 176 TVLTPMPAYARHTGQVGTKLYMSPE---QIHGNSYSHKVDIFSLGLILFELLY---PFS 228
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 110/263 (41%), Gaps = 12/263 (4%)
Query: 11 VDAKDYRLYEEVGEGVSATVYRA-LCIPLNEIV--AIKVL--DLEKCNNDLDGIRREVQT 65
+ KD RL E++G+G V R P + V A+K L D+ +D REV
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 66 MRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
M +H N++R + T + +V GS L ++ + F ++ + +
Sbjct: 65 MHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRK-HQGHFLLGTLSRYAVQVAE 122
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
+ YL IHRD+ A N+L+ + +K+ DFG+ + D + W A
Sbjct: 123 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 182
Query: 186 PEVMQQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDK 244
PE ++ + +D W FG+T E+ +G P+ ++L + G R +
Sbjct: 183 PESLKT-RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKE---GERLPRPE 238
Query: 245 RFSKSFKELVTACLVKDPKKRPT 267
+ ++ C P+ RPT
Sbjct: 239 DCPQDIYNVMVQCWAHKPEDRPT 261
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 98/231 (42%), Gaps = 24/231 (10%)
Query: 3 LVVEKRFPVDAKDYRLYEEV---------GEGVSATVYRALCIPLNEIVAIKVLDLEKCN 53
L+ EK PVD Y EEV G G V+R A+K + LE
Sbjct: 55 LLTEKLKPVD---YEYREEVHWMTHQPRLGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR 111
Query: 54 NDLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEE 113
+ E+ + P ++ + + G + + M + GGS ++K E
Sbjct: 112 VE------ELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQM--GCLPE 163
Query: 114 PVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGA-IKLADFGVSACMF--DAGDR 170
L + L+ L YLH +H DVKA N+L+ S+G+ L DFG + C+ G
Sbjct: 164 DRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKS 223
Query: 171 QRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKY 221
+ + GT MAPEV+ D K DIWS L + +G P+++Y
Sbjct: 224 LLTGDYIPGTETHMAPEVVMG-KPCDAKVDIWSSCCMMLHMLNGCHPWTQY 273
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 98/231 (42%), Gaps = 24/231 (10%)
Query: 3 LVVEKRFPVDAKDYRLYEEV---------GEGVSATVYRALCIPLNEIVAIKVLDLEKCN 53
L+ EK PVD Y EEV G G V+R A+K + LE
Sbjct: 41 LLTEKLKPVD---YEYREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR 97
Query: 54 NDLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEE 113
+ E+ + P ++ + + G + + M + GGS ++K E
Sbjct: 98 VE------ELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQM--GCLPE 149
Query: 114 PVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGA-IKLADFGVSACMF--DAGDR 170
L + L+ L YLH +H DVKA N+L+ S+G+ L DFG + C+ G
Sbjct: 150 DRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKS 209
Query: 171 QRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKY 221
+ + GT MAPEV+ D K DIWS L + +G P+++Y
Sbjct: 210 LLTGDYIPGTETHMAPEVVMG-KPCDAKVDIWSSCCMMLHMLNGCHPWTQY 259
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 101/246 (41%), Gaps = 24/246 (9%)
Query: 3 LVVEKRFPVDAKDYRLYEEV---------GEGVSATVYRALCIPLNEIVAIKVLDLEKCN 53
L+ EK PVD Y EEV G G V+R A+K + LE
Sbjct: 57 LLTEKLKPVD---YEYREEVHWATHQLRLGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFR 113
Query: 54 NDLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEE 113
+ E+ P ++ + + G + + M + GGS ++K E
Sbjct: 114 AE------ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQ--GCLPE 165
Query: 114 PVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGA-IKLADFGVSACMF--DAGDR 170
L + L+ L YLH +H DVKA N+L+ S+G+ L DFG + C+ G
Sbjct: 166 DRALYYLGQALEGLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKD 225
Query: 171 QRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMT 230
+ + GT MAPEV+ D K D+WS L + +G P++++ + L
Sbjct: 226 LLTGDYIPGTETHMAPEVVLG-RSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLKI 284
Query: 231 LQNAPP 236
PP
Sbjct: 285 ASEPPP 290
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 117/283 (41%), Gaps = 41/283 (14%)
Query: 8 RFPVDAKDYRLYEEVGEGVSATVYRALCI-----PLNEIVAIKVLDLEKCNNDLDGIRRE 62
++ + +D L +GEG VY + +N VA+K + ++ + E
Sbjct: 6 QYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKIN--VAVKTCKKDCTLDNKEKFMSE 63
Query: 63 VQTMRVTNHPNVLRAHCSFTTGHCLWVVM---PYMAGGSCLHIMKSAYPEGFEEPVIATL 119
M+ +HP++++ W++M PY G L K++ + TL
Sbjct: 64 AVIMKNLDHPHIVKL-IGIIEEEPTWIIMELYPYGELGHYLERNKNSLK-------VLTL 115
Query: 120 LRETL---KALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNT 176
+ +L KA+ YL +HRD+ NIL+ S +KL DFG+S + D D ++ T
Sbjct: 116 VLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDE-DYYKASVT 174
Query: 177 FVGTPCWMAPEVMQQLHGYDFKADIWSFGITALE-LAHGHAPFSKYPPMKVLLMTLQNAP 235
+ WM+PE + + +D+W F + E L+ G PF L+N
Sbjct: 175 RLPIK-WMSPESI-NFRRFTTASDVWMFAVCMWEILSFGKQPF----------FWLENKD 222
Query: 236 PGLDYERDKRFSK------SFKELVTACLVKDPKKRPTAEKLM 272
E+ R K L+T C DP RP +L+
Sbjct: 223 VIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELV 265
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 110/274 (40%), Gaps = 28/274 (10%)
Query: 11 VDAKDYRLYEEVGEGVSATVYRALCI-------PLNEIVAIKVLDLEKCN--NDLDGIRR 61
V K+ L +G G VY PL VA+K L E C+ ++LD +
Sbjct: 42 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQ--VAVKTLP-EVCSEQDELDFLM- 97
Query: 62 EVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATL-- 119
E + NH N++R +++M MAGG ++ P + +A L
Sbjct: 98 EALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDL 157
Query: 120 ---LRETLKALVYLHFHGHIHRDVKAGNILIDSNG---AIKLADFGVSACMFDAGDRQRS 173
R+ YL + IHRD+ A N L+ G K+ DFG++ ++ A ++
Sbjct: 158 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKG 217
Query: 174 RNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQ 232
+ WM PE + + K D WSFG+ E+ + G+ P+ P K L+
Sbjct: 218 GCAMLPVK-WMPPEAFME-GIFTSKTDTWSFGVLLWEIFSLGYMPY----PSKSNQEVLE 271
Query: 233 NAPPGLDYERDKRFSKSFKELVTACLVKDPKKRP 266
G + K ++T C P+ RP
Sbjct: 272 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRP 305
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 110/263 (41%), Gaps = 12/263 (4%)
Query: 11 VDAKDYRLYEEVGEGVSATVYRA-LCIPLNEIV--AIKVL--DLEKCNNDLDGIRREVQT 65
+ KD RL E++G+G V R P + V A+K L D+ +D REV
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 66 MRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLK 125
M +H N++R + T + +V GS L ++ + F ++ + +
Sbjct: 65 MHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRK-HQGHFLLGTLSRYAVQVAE 122
Query: 126 ALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFVGTPCWMA 185
+ YL IHRD+ A N+L+ + +K+ DFG+ + D + W A
Sbjct: 123 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 182
Query: 186 PEVMQQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDK 244
PE ++ + +D W FG+T E+ +G P+ ++L + G R +
Sbjct: 183 PESLKT-RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKE---GERLPRPE 238
Query: 245 RFSKSFKELVTACLVKDPKKRPT 267
+ ++ C P+ RPT
Sbjct: 239 DCPQDIYNVMVQCWAHKPEDRPT 261
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 110/274 (40%), Gaps = 28/274 (10%)
Query: 11 VDAKDYRLYEEVGEGVSATVYRALCI-------PLNEIVAIKVLDLEKCN--NDLDGIRR 61
V K+ L +G G VY PL VA+K L E C+ ++LD +
Sbjct: 27 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQ--VAVKTLP-EVCSEQDELDFLM- 82
Query: 62 EVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATL-- 119
E + NH N++R +++M MAGG ++ P + +A L
Sbjct: 83 EALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDL 142
Query: 120 ---LRETLKALVYLHFHGHIHRDVKAGNILIDSNG---AIKLADFGVSACMFDAGDRQRS 173
R+ YL + IHRD+ A N L+ G K+ DFG++ ++ A ++
Sbjct: 143 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKG 202
Query: 174 RNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQ 232
+ WM PE + + K D WSFG+ E+ + G+ P+ P K L+
Sbjct: 203 GCAMLPVK-WMPPEAFME-GIFTSKTDTWSFGVLLWEIFSLGYMPY----PSKSNQEVLE 256
Query: 233 NAPPGLDYERDKRFSKSFKELVTACLVKDPKKRP 266
G + K ++T C P+ RP
Sbjct: 257 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRP 290
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 98/231 (42%), Gaps = 24/231 (10%)
Query: 3 LVVEKRFPVDAKDYRLYEEV---------GEGVSATVYRALCIPLNEIVAIKVLDLEKCN 53
L+ EK PVD Y EEV G G V+R A+K + LE
Sbjct: 57 LLTEKLKPVD---YEYREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR 113
Query: 54 NDLDGIRREVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEE 113
+ E+ + P ++ + + G + + M + GGS ++K E
Sbjct: 114 VE------ELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQM--GCLPE 165
Query: 114 PVIATLLRETLKALVYLHFHGHIHRDVKAGNILIDSNGA-IKLADFGVSACMF--DAGDR 170
L + L+ L YLH +H DVKA N+L+ S+G+ L DFG + C+ G
Sbjct: 166 DRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKS 225
Query: 171 QRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKY 221
+ + GT MAPEV+ D K DIWS L + +G P+++Y
Sbjct: 226 LLTGDYIPGTETHMAPEVVMG-KPCDAKVDIWSSCCMMLHMLNGCHPWTQY 275
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 117/283 (41%), Gaps = 41/283 (14%)
Query: 8 RFPVDAKDYRLYEEVGEGVSATVYRALCI-----PLNEIVAIKVLDLEKCNNDLDGIRRE 62
++ + +D L +GEG VY + +N VA+K + ++ + E
Sbjct: 2 QYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKIN--VAVKTCKKDCTLDNKEKFMSE 59
Query: 63 VQTMRVTNHPNVLRAHCSFTTGHCLWVVM---PYMAGGSCLHIMKSAYPEGFEEPVIATL 119
M+ +HP++++ W++M PY G L K++ + TL
Sbjct: 60 AVIMKNLDHPHIVKL-IGIIEEEPTWIIMELYPYGELGHYLERNKNSLK-------VLTL 111
Query: 120 LRETL---KALVYLHFHGHIHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNT 176
+ +L KA+ YL +HRD+ NIL+ S +KL DFG+S + D D ++ T
Sbjct: 112 VLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDE-DYYKASVT 170
Query: 177 FVGTPCWMAPEVMQQLHGYDFKADIWSFGITALE-LAHGHAPFSKYPPMKVLLMTLQNAP 235
+ WM+PE + + +D+W F + E L+ G PF L+N
Sbjct: 171 RLPIK-WMSPESI-NFRRFTTASDVWMFAVCMWEILSFGKQPF----------FWLENKD 218
Query: 236 PGLDYERDKRFSK------SFKELVTACLVKDPKKRPTAEKLM 272
E+ R K L+T C DP RP +L+
Sbjct: 219 VIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELV 261
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 110/274 (40%), Gaps = 28/274 (10%)
Query: 11 VDAKDYRLYEEVGEGVSATVYRALCI-------PLNEIVAIKVLDLEKCN--NDLDGIRR 61
V K+ L +G G VY PL VA+K L E C+ ++LD +
Sbjct: 28 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQ--VAVKTLP-EVCSEQDELDFLM- 83
Query: 62 EVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATL-- 119
E + NH N++R ++++ MAGG ++ P + +A L
Sbjct: 84 EALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 143
Query: 120 ---LRETLKALVYLHFHGHIHRDVKAGNILIDSNG---AIKLADFGVSACMFDAGDRQRS 173
R+ YL + IHRD+ A N L+ G K+ DFG++ ++ A ++
Sbjct: 144 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKG 203
Query: 174 RNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQ 232
+ WM PE + + K D WSFG+ E+ + G+ P+ P K L+
Sbjct: 204 GCAMLPVK-WMPPEAFME-GIFTSKTDTWSFGVLLWEIFSLGYMPY----PSKSNQEVLE 257
Query: 233 NAPPGLDYERDKRFSKSFKELVTACLVKDPKKRP 266
G + K ++T C P+ RP
Sbjct: 258 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRP 291
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 110/274 (40%), Gaps = 28/274 (10%)
Query: 11 VDAKDYRLYEEVGEGVSATVYRALCI-------PLNEIVAIKVLDLEKCN--NDLDGIRR 61
V K+ L +G G VY PL VA+K L E C+ ++LD +
Sbjct: 54 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQ--VAVKTLP-EVCSEQDELDFLM- 109
Query: 62 EVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATL-- 119
E + NH N++R ++++ MAGG ++ P + +A L
Sbjct: 110 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 169
Query: 120 ---LRETLKALVYLHFHGHIHRDVKAGNILIDSNG---AIKLADFGVSACMFDAGDRQRS 173
R+ YL + IHRD+ A N L+ G K+ DFG++ ++ A ++
Sbjct: 170 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKG 229
Query: 174 RNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQ 232
+ WM PE + + K D WSFG+ E+ + G+ P+ P K L+
Sbjct: 230 GCAMLPVK-WMPPEAFME-GIFTSKTDTWSFGVLLWEIFSLGYMPY----PSKSNQEVLE 283
Query: 233 NAPPGLDYERDKRFSKSFKELVTACLVKDPKKRP 266
G + K ++T C P+ RP
Sbjct: 284 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRP 317
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 110/274 (40%), Gaps = 28/274 (10%)
Query: 11 VDAKDYRLYEEVGEGVSATVYRALCI-------PLNEIVAIKVLDLEKCN--NDLDGIRR 61
V K+ L +G G VY PL VA+K L E C+ ++LD +
Sbjct: 28 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQ--VAVKTLP-EVCSEQDELDFLM- 83
Query: 62 EVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATL-- 119
E + NH N++R ++++ MAGG ++ P + +A L
Sbjct: 84 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 143
Query: 120 ---LRETLKALVYLHFHGHIHRDVKAGNILIDSNG---AIKLADFGVSACMFDAGDRQRS 173
R+ YL + IHRD+ A N L+ G K+ DFG++ ++ A ++
Sbjct: 144 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKG 203
Query: 174 RNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQ 232
+ WM PE + + K D WSFG+ E+ + G+ P+ P K L+
Sbjct: 204 GCAMLPVK-WMPPEAFME-GIFTSKTDTWSFGVLLWEIFSLGYMPY----PSKSNQEVLE 257
Query: 233 NAPPGLDYERDKRFSKSFKELVTACLVKDPKKRP 266
G + K ++T C P+ RP
Sbjct: 258 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRP 291
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 100/218 (45%), Gaps = 34/218 (15%)
Query: 17 RLYEEVGEGVSATVYRALCIPLNEIVAIKVL---DLEKCNNDLDGIRREVQTMRVTNHPN 73
+L E G V++A LNE VA+K+ D + N+ EV ++ H N
Sbjct: 27 QLLEVKARGRFGCVWKAQL--LNEYVAVKIFPIQDKQSWQNEY-----EVYSLPGMKHEN 79
Query: 74 VLRAHCSFTTGHC----LWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETL-KALV 128
+L+ + G LW++ + GS +K+ E IA ET+ + L
Sbjct: 80 ILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANVVSWNELCHIA----ETMARGLA 135
Query: 129 YLH------FHGH----IHRDVKAGNILIDSNGAIKLADFGVSACMFDAGDRQRSRNTFV 178
YLH GH HRD+K+ N+L+ +N +ADFG+ A F+AG + V
Sbjct: 136 YLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGL-ALKFEAGKSAGDTHGQV 194
Query: 179 GTPCWMAPEVMQQLHGYD----FKADIWSFGITALELA 212
GT +MAPEV++ + + D+++ G+ ELA
Sbjct: 195 GTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELA 232
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 110/274 (40%), Gaps = 28/274 (10%)
Query: 11 VDAKDYRLYEEVGEGVSATVYRALCI-------PLNEIVAIKVLDLEKCN--NDLDGIRR 61
V K+ L +G G VY PL VA+K L E C+ ++LD +
Sbjct: 28 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQ--VAVKTLP-EVCSEQDELDFLM- 83
Query: 62 EVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATL-- 119
E + NH N++R ++++ MAGG ++ P + +A L
Sbjct: 84 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 143
Query: 120 ---LRETLKALVYLHFHGHIHRDVKAGNILIDSNG---AIKLADFGVSACMFDAGDRQRS 173
R+ YL + IHRD+ A N L+ G K+ DFG++ ++ A ++
Sbjct: 144 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKG 203
Query: 174 RNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQ 232
+ WM PE + + K D WSFG+ E+ + G+ P+ P K L+
Sbjct: 204 GCAMLPVK-WMPPEAFME-GIFTSKTDTWSFGVLLWEIFSLGYMPY----PSKSNQEVLE 257
Query: 233 NAPPGLDYERDKRFSKSFKELVTACLVKDPKKRP 266
G + K ++T C P+ RP
Sbjct: 258 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRP 291
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 110/274 (40%), Gaps = 28/274 (10%)
Query: 11 VDAKDYRLYEEVGEGVSATVYRALCI-------PLNEIVAIKVLDLEKCN--NDLDGIRR 61
V K+ L +G G VY PL VA+K L E C+ ++LD +
Sbjct: 34 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQ--VAVKTLP-EVCSEQDELDFLM- 89
Query: 62 EVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATL-- 119
E + NH N++R ++++ MAGG ++ P + +A L
Sbjct: 90 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 149
Query: 120 ---LRETLKALVYLHFHGHIHRDVKAGNILIDSNG---AIKLADFGVSACMFDAGDRQRS 173
R+ YL + IHRD+ A N L+ G K+ DFG++ ++ A ++
Sbjct: 150 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKG 209
Query: 174 RNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQ 232
+ WM PE + + K D WSFG+ E+ + G+ P+ P K L+
Sbjct: 210 GCAMLPVK-WMPPEAFME-GIFTSKTDTWSFGVLLWEIFSLGYMPY----PSKSNQEVLE 263
Query: 233 NAPPGLDYERDKRFSKSFKELVTACLVKDPKKRP 266
G + K ++T C P+ RP
Sbjct: 264 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRP 297
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 110/274 (40%), Gaps = 28/274 (10%)
Query: 11 VDAKDYRLYEEVGEGVSATVYRALCI-------PLNEIVAIKVLDLEKCN--NDLDGIRR 61
V K+ L +G G VY PL VA+K L E C+ ++LD +
Sbjct: 44 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQ--VAVKTLP-EVCSEQDELDFLM- 99
Query: 62 EVQTMRVTNHPNVLRAHCSFTTGHCLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATL-- 119
E + NH N++R ++++ MAGG ++ P + +A L
Sbjct: 100 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 159
Query: 120 ---LRETLKALVYLHFHGHIHRDVKAGNILIDSNG---AIKLADFGVSACMFDAGDRQRS 173
R+ YL + IHRD+ A N L+ G K+ DFG++ ++ A ++
Sbjct: 160 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKG 219
Query: 174 RNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALEL-AHGHAPFSKYPPMKVLLMTLQ 232
+ WM PE + + K D WSFG+ E+ + G+ P+ P K L+
Sbjct: 220 GCAMLPVK-WMPPEAFME-GIFTSKTDTWSFGVLLWEIFSLGYMPY----PSKSNQEVLE 273
Query: 233 NAPPGLDYERDKRFSKSFKELVTACLVKDPKKRP 266
G + K ++T C P+ RP
Sbjct: 274 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRP 307
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 119/306 (38%), Gaps = 62/306 (20%)
Query: 13 AKDYRLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMRVT--N 70
A+ L E VG+G V+R E VA+K+ + D RE +
Sbjct: 36 ARQITLLECVGKGRYGEVWRGSW--QGENVAVKIFS----SRDEKSWFRETELYNTVMLR 89
Query: 71 HPNVLRAHCS-FTTGHC---LWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLRETLKA 126
H N+L S T+ H LW++ Y GS ++ + + LR L
Sbjct: 90 HENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLD------TVSCLRIVLSI 143
Query: 127 LVYL-HFHGHI----------HRDVKAGNILIDSNGAIKLADFGV------SACMFDAGD 169
L H H I HRD+K+ NIL+ NG +AD G+ S D G+
Sbjct: 144 ASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGN 203
Query: 170 RQRSRNTFVGTPCWMAPEVMQ---QLHGYDF--KADIWSFGITALELAHGHA-------- 216
R VGT +MAPEV+ Q+ +D + DIW+FG+ E+A
Sbjct: 204 NPR-----VGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDY 258
Query: 217 --PFSKYPP-------MKVLLMTLQNAPPGLDYERDKRFSKSFKELVTACLVKDPKKRPT 267
PF P M+ ++ Q P + S +L+ C ++P R T
Sbjct: 259 KPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLT 318
Query: 268 AEKLMK 273
A ++ K
Sbjct: 319 ALRIKK 324
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Query: 116 IATLLRETLKALVYLHFHGHIHRDVKAGNILIDSN-GAIKLADFGVSACMFDAGDRQRSR 174
I + E LKAL Y H G +HRDVK N++ID ++L D+G+ A + G +
Sbjct: 127 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGL-AEFYHPG---KEY 182
Query: 175 NTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPF 218
N V + + PE++ L YD+ D+WS G + PF
Sbjct: 183 NVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.132 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,637,335
Number of Sequences: 62578
Number of extensions: 829144
Number of successful extensions: 5200
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1038
Number of HSP's successfully gapped in prelim test: 74
Number of HSP's that attempted gapping in prelim test: 1822
Number of HSP's gapped (non-prelim): 1198
length of query: 644
length of database: 14,973,337
effective HSP length: 105
effective length of query: 539
effective length of database: 8,402,647
effective search space: 4529026733
effective search space used: 4529026733
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)