Your job contains 1 sequence.
>006464
MGGNRTIVWFRRDLRIEDNPALAAAARDGSVFPVYTWCPKEEGQFYPGRVSRWWLKQSLS
YLGQSLKSLGAELVLFKTESTLAALLECISAIKATKVVFNHLYDPVSLVRDHSIKEKLVE
LGISVQSYNGDLLYEPWEIYDERGHAFTTFDAYWDKCLQMQMEPASILPPWRLVQAAGTI
DGCSIEDLGLEDESEKSSNALLGRGWSPGWSNADKVLTEFVEQHLLRYYKNRQKLGGNST
SLLSPYLHFGELSVRKVFQCLWMKQILWAKEENFEGKESVTFFLRAMGLREYSRYLCFNF
PFTHERPLLSNLKYFPWHADLGNFKAWRQGRTGYPLVDAGMRELWATGWIHNRIRVIVSS
FAVKVLLLPWRWGMKYFWDTLLDADLECDILGWQYISGSLPDGHELERLDSPEIQGSKFD
PEGEYVRQWLPELARMPTEWIHHPWDAPPNVLKAAGVELGLNYPKPIIDLDLGRERLTQA
IFKMWEMEAADNAMDSNGTNEVVFDNSDRIQTPAIPQVVLREKSTCPTISSNDQKVPSFQ
NGKNNLPSRKRPKNVEEERQYPDELYSCKNEAGNSGAHDDFCSTAESSAAKRQTTTNISF
SVPHSFSLSEGKALQEYRSSDVNRPWQEQIDREQNSSNDGAMRY
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 006464
(644 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2018254 - symbol:CRY2 "cryptochrome 2" species... 2103 1.0e-217 1
TAIR|locus:2138728 - symbol:CRY1 "cryptochrome 1" species... 1747 5.5e-180 1
TIGR_CMR|CBU_1176 - symbol:CBU_1176 "deoxyribodipyrimidin... 844 2.7e-84 1
TIGR_CMR|BA_3180 - symbol:BA_3180 "deoxyribodipyrimidine ... 831 6.4e-83 1
TIGR_CMR|SPO_1917 - symbol:SPO_1917 "deoxyribodipyrimidin... 590 2.2e-57 1
UNIPROTKB|Q9KNA8 - symbol:phrA "Deoxyribodipyrimidine pho... 528 8.3e-51 1
TIGR_CMR|VC_A0057 - symbol:VC_A0057 "deoxyribodipyrimidin... 528 8.3e-51 1
UNIPROTKB|P00914 - symbol:phr "deoxyribodipyrimidine phot... 524 2.2e-50 1
TAIR|locus:2093217 - symbol:UVR3 "UV REPAIR DEFECTIVE 3" ... 520 5.8e-50 1
UNIPROTKB|Q48MU1 - symbol:phrB "Deoxyribodipyrimidine pho... 516 1.5e-49 1
ZFIN|ZDB-GENE-010426-8 - symbol:cry5 "cryptochrome 5" spe... 461 1.0e-43 1
TIGR_CMR|SO_3384 - symbol:SO_3384 "deoxyribodipyrimidine ... 455 4.5e-43 1
TIGR_CMR|CPS_1380 - symbol:CPS_1380 "deoxyribodipyrimidin... 427 8.1e-40 1
ZFIN|ZDB-GENE-010426-6 - symbol:cry3 "cryptochrome 3" spe... 432 2.6e-39 1
UNIPROTKB|Q49AN0 - symbol:CRY2 "Cryptochrome-2" species:9... 430 3.7e-39 1
UNIPROTKB|Q8QG60 - symbol:CRY2 "Cryptochrome-2" species:9... 426 4.2e-39 1
MGI|MGI:1270859 - symbol:Cry2 "cryptochrome 2 (photolyase... 429 4.8e-39 1
UNIPROTKB|B4DZD6 - symbol:CRY2 "Cryptochrome-2" species:9... 430 1.1e-38 1
RGD|620935 - symbol:Cry2 "cryptochrome 2 (photolyase-like... 427 1.2e-38 1
UNIPROTKB|Q923I8 - symbol:Cry2 "Cryptochrome-2" species:1... 427 1.2e-38 1
UNIPROTKB|F1SHJ9 - symbol:CRY2 "Uncharacterized protein" ... 427 2.8e-38 1
UNIPROTKB|Q17DK5 - symbol:cry "Cryptochrome-1" species:71... 342 3.6e-38 3
ASPGD|ASPL0000053661 - symbol:cryA species:162425 "Emeric... 416 4.4e-38 1
UNIPROTKB|F1PNC9 - symbol:CRY2 "Uncharacterized protein" ... 423 4.4e-38 1
ZFIN|ZDB-GENE-040617-2 - symbol:cry-dash "cryptochrome DA... 392 7.2e-38 2
FB|FBgn0016054 - symbol:phr6-4 "(6-4)-photolyase" species... 400 9.2e-37 1
ZFIN|ZDB-GENE-010426-7 - symbol:cry4 "cryptochrome 4" spe... 412 9.5e-37 1
UNIPROTKB|F1N0J9 - symbol:Bt.20450 "Uncharacterized prote... 410 3.8e-36 1
UNIPROTKB|Q2TV23 - symbol:LOC395100 "Cryptochrome-like pr... 394 4.3e-36 1
UNIPROTKB|F1NYE9 - symbol:CRY1 "Cryptochrome-1" species:9... 405 1.8e-35 1
UNIPROTKB|Q8QG61 - symbol:CRY1 "Cryptochrome-1" species:9... 405 1.8e-35 1
UNIPROTKB|E1C2Z9 - symbol:CRY1 "Cryptochrome-1" species:9... 405 1.9e-35 1
UNIPROTKB|Q8WP19 - symbol:CRY1 "Cryptochrome-1" species:9... 402 2.3e-35 1
UNIPROTKB|Q16526 - symbol:CRY1 "Cryptochrome-1" species:9... 401 3.0e-35 1
UNIPROTKB|Q70AD6 - symbol:CRY1 "Cryptochrome-1" species:1... 401 3.1e-35 1
UNIPROTKB|F1P5X2 - symbol:LOC395100 "Uncharacterized prot... 394 5.1e-35 1
UNIPROTKB|E2RMX4 - symbol:CRY1 "Uncharacterized protein" ... 397 9.5e-35 1
UNIPROTKB|Q7PYI7 - symbol:Cry1 "Cryptochrome-1" species:7... 323 9.9e-35 3
ZFIN|ZDB-GENE-010426-3 - symbol:cry1b "cryptochrome 1b" s... 398 1.0e-34 1
RGD|735083 - symbol:Cry1 "cryptochrome 1 (photolyase-like... 396 1.3e-34 1
UNIPROTKB|Q32Q86 - symbol:Cry1 "Cryptochrome-1" species:1... 396 1.3e-34 1
MGI|MGI:1270841 - symbol:Cry1 "cryptochrome 1 (photolyase... 395 2.3e-34 1
ZFIN|ZDB-GENE-010426-4 - symbol:cry2a "cryptochrome 2a" s... 395 4.1e-34 1
UNIPROTKB|F1SPQ5 - symbol:CRY1 "Uncharacterized protein" ... 389 9.4e-34 1
ZFIN|ZDB-GENE-010426-2 - symbol:cry1a "cryptochrome 1a" s... 390 1.1e-33 1
ZFIN|ZDB-GENE-120215-243 - symbol:si:ch73-25i22.2 "si:ch7... 372 1.2e-33 1
ZFIN|ZDB-GENE-010426-5 - symbol:cry2b "cryptochrome 2b" s... 389 1.7e-33 1
UNIPROTKB|G4MNA0 - symbol:MGG_02071 "Cryptochrome-1" spec... 253 1.5e-31 3
FB|FBgn0025680 - symbol:cry "cryptochrome" species:7227 "... 304 2.5e-31 3
UNIPROTKB|F1P3P5 - symbol:CRY2 "Cryptochrome-2" species:9... 363 4.3e-31 1
UNIPROTKB|F1NX44 - symbol:CRY2 "Cryptochrome-2" species:9... 363 5.0e-31 1
UNIPROTKB|F1MXB2 - symbol:CRY1 "Uncharacterized protein" ... 357 5.4e-30 1
UNIPROTKB|Q293P8 - symbol:cry "Cryptochrome-1" species:46... 289 8.3e-30 3
UNIPROTKB|B0WRR9 - symbol:cry "Cryptochrome-1" species:71... 337 1.3e-29 2
SGD|S000005913 - symbol:PHR1 "DNA photolyase involved in ... 305 2.6e-27 3
UNIPROTKB|Q7T3R1 - symbol:LOC395100 "Uncharacterized prot... 245 7.5e-20 1
UNIPROTKB|Q9KR33 - symbol:cry1 "Cryptochrome DASH" specie... 239 4.6e-17 1
TIGR_CMR|VC_1814 - symbol:VC_1814 "RNA-binding cryptochro... 239 4.6e-17 1
TAIR|locus:2061961 - symbol:PHR2 "photolyase/blue-light r... 167 4.1e-09 1
>TAIR|locus:2018254 [details] [associations]
symbol:CRY2 "cryptochrome 2" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009882 "blue light photoreceptor activity" evidence=ISS]
[GO:0005773 "vacuole" evidence=IDA] [GO:0042802 "identical protein
binding" evidence=IPI] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0009414 "response to water deprivation"
evidence=IGI] [GO:0010118 "stomatal movement" evidence=IGI]
[GO:0009909 "regulation of flower development" evidence=IDA]
[GO:0009911 "positive regulation of flower development"
evidence=IMP] [GO:0006338 "chromatin remodeling" evidence=IMP]
[GO:0010617 "circadian regulation of calcium ion oscillation"
evidence=IMP] [GO:0010075 "regulation of meristem growth"
evidence=IGI] [GO:0006325 "chromatin organization" evidence=IMP]
[GO:0009416 "response to light stimulus" evidence=IEP] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA] [GO:0009637
"response to blue light" evidence=IMP] [GO:0009638 "phototropism"
evidence=IGI] InterPro:IPR002081 InterPro:IPR005101
InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
PROSITE:PS00691 InterPro:IPR006050 Pfam:PF00875 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005634 GO:GO:0005773
GO:GO:0009414 GO:GO:0006281 GO:GO:0010118 GO:GO:0006338
EMBL:AC000104 GO:GO:0018298 GO:GO:0009911 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0010075 eggNOG:COG0415 GO:GO:0009882
GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645
ProtClustDB:CLSN2681786 GO:GO:0010617 InterPro:IPR014134
TIGRFAMs:TIGR02766 EMBL:U62549 EMBL:U62550 EMBL:X99061 EMBL:U43397
EMBL:AY057440 EMBL:AY057441 EMBL:AY057442 EMBL:EU351967
EMBL:EU351968 EMBL:EU351969 EMBL:EU351970 EMBL:EU351971
EMBL:EU351972 EMBL:EU351973 EMBL:EU351974 EMBL:EU351975
EMBL:EU351976 EMBL:EU351977 EMBL:EU351978 EMBL:EU351979
EMBL:EU351980 EMBL:EU351981 EMBL:EU351982 EMBL:EU351983
EMBL:EU351984 EMBL:EU351985 EMBL:EU351986 EMBL:EU351987
EMBL:EU351988 EMBL:EU351989 EMBL:EU351990 EMBL:EU351991
EMBL:EU351993 EMBL:EU351992 EMBL:EU351994 EMBL:EU351995
EMBL:EU351996 EMBL:EU351997 EMBL:EU351998 EMBL:BT008576
EMBL:BT008648 EMBL:AY576241 EMBL:AY576242 EMBL:AY576243
EMBL:AY576244 EMBL:AY576245 EMBL:AY576246 EMBL:AY576247
EMBL:AY576248 EMBL:AY576249 EMBL:AY576250 EMBL:AY576251
EMBL:AY576252 EMBL:AY576253 EMBL:AY576254 EMBL:AY576255
EMBL:AY576256 EMBL:AY576257 EMBL:AY576258 EMBL:AY576259
EMBL:AY576260 EMBL:AY576261 EMBL:AY576262 EMBL:AY576263
EMBL:AY576264 EMBL:AY576265 EMBL:AY576266 EMBL:AY576267
EMBL:AY576268 EMBL:AY576269 EMBL:AY576270 EMBL:AY576271
EMBL:AK220946 IPI:IPI00528436 PIR:A86176 PIR:S71221
RefSeq:NP_171935.1 RefSeq:NP_849588.1 UniGene:At.21976
ProteinModelPortal:Q96524 SMR:Q96524 DIP:DIP-33589N IntAct:Q96524
MINT:MINT-207946 STRING:Q96524 PaxDb:Q96524 PRIDE:Q96524
EnsemblPlants:AT1G04400.1 EnsemblPlants:AT1G04400.2 GeneID:839529
KEGG:ath:AT1G04400 TAIR:At1g04400 InParanoid:Q96524 KO:K12119
OMA:GDLANNQ PhylomeDB:Q96524 Genevestigator:Q96524
GermOnline:AT1G04400 GO:GO:0009638 Uniprot:Q96524
Length = 612
Score = 2103 (745.4 bits), Expect = 1.0e-217, P = 1.0e-217
Identities = 393/615 (63%), Positives = 482/615 (78%)
Query: 5 RTIVWFRRDLRIEDNPALAAAARDGSVFPVYTWCPKEEGQFYPGRVSRWWLKQSLSYLGQ 64
+TIVWFRRDLRIEDNPALAAAA +GSVFPV+ WCP+EEGQFYPGR SRWW+KQSL++L Q
Sbjct: 6 KTIVWFRRDLRIEDNPALAAAAHEGSVFPVFIWCPEEEGQFYPGRASRWWMKQSLAHLSQ 65
Query: 65 SLKSLGAELVLFKTESTLAALLECISAIKATKVVFNHLYDPVSLVRDHSIKEKLVELGIS 124
SLK+LG++L L KT +T++A+L+CI ATKVVFNHLYDPVSLVRDH++KEKLVE GIS
Sbjct: 66 SLKALGSDLTLIKTHNTISAILDCIRVTGATKVVFNHLYDPVSLVRDHTVKEKLVERGIS 125
Query: 125 VQSYNGDLLYEPWEIYDERGHAFTTFDAYWDKCLQMQMEPASILPPWRLVQ---AAGTID 181
VQSYNGDLLYEPWEIY E+G FT+F++YW KCL M +E + PPWRL+ AA I
Sbjct: 126 VQSYNGDLLYEPWEIYCEKGKPFTSFNSYWKKCLDMSIESVMLPPPWRLMPITAAAEAIW 185
Query: 182 GCSIEDLGLEDESEKSSNALLGRGWSPGWSNADKVLTEFVEQHLLRYYKNRQKLGGNSTS 241
CSIE+LGLE+E+EK SNALL R WSPGWSNADK+L EF+E+ L+ Y KN +K+ GNSTS
Sbjct: 186 ACSIEELGLENEAEKPSNALLTRAWSPGWSNADKLLNEFIEKQLIDYAKNSKKVVGNSTS 245
Query: 242 LLSPYLHFGELSVRKVFQCLWMKQILWAKEENFEGKESVTFFLRAMGLREYSRYLCFNFP 301
LLSPYLHFGE+SVR VFQC MKQI+WA+++N EG+ES FLR +GLREYSRY+CFNFP
Sbjct: 246 LLSPYLHFGEISVRHVFQCARMKQIIWARDKNSEGEESADLFLRGIGLREYSRYICFNFP 305
Query: 302 FTHERPLLSNLKYFPWHADLGNFKAWRQGRTGYPLVDAGMRELWATGWIHNRIRVIVSSF 361
FTHE+ LLS+L++FPW AD+ FKAWRQGRTGYPLVDAGMRELWATGW+HNRIRVIVSSF
Sbjct: 306 FTHEQSLLSHLRFFPWDADVDKFKAWRQGRTGYPLVDAGMRELWATGWMHNRIRVIVSSF 365
Query: 362 AVKVLLLPWRWGMKYFWDTLLDADLECDILGWQYISGSLPDGHELERLDSPEIQGSKFDP 421
AVK LLLPW+WGMKYFWDTLLDADLECDILGWQYISGS+PDGHEL+RLD+P +QG+K+DP
Sbjct: 366 AVKFLLLPWKWGMKYFWDTLLDADLECDILGWQYISGSIPDGHELDRLDNPALQGAKYDP 425
Query: 422 EGEYVRQWLPELARMPTEWIHHPWDAPPNVLKAAGVELGLNYPKPIIDLDLGRERLTQAI 481
EGEY+RQWLPELAR+PTEWIHHPWDAP VLKA+GVELG NY KPI+D+D RE L +AI
Sbjct: 426 EGEYIRQWLPELARLPTEWIHHPWDAPLTVLKASGVELGTNYAKPIVDIDTARELLAKAI 485
Query: 482 FKMWEMEAADNAMDSNGTNEVVFDNSDRIQTPAIPQVVLREKSTCPTISSNDQKVPSF-- 539
+ E + A +E+V D+ + A+ ++E CP++SSNDQ+VPS
Sbjct: 486 SRTREAQIMIGA----APDEIVADSFE-----ALGANTIKEPGLCPSVSSNDQQVPSAVR 536
Query: 540 QNGKNNL-PSRKRPKNVEEERQYPD-ELYSCKNEAGNSGAHDDFCSTAESSAAKRQTTTN 597
NG + P + +++++ R + + EL+S + +S F S + S A++ +
Sbjct: 537 YNGSKRVKPEEEEERDMKKSRGFDERELFSTAESSSSSSVF--FVSQSCSLASEGKNLEG 594
Query: 598 ISFSVPHSFSLSEGK 612
I S + S GK
Sbjct: 595 IQDS-SDQITTSLGK 608
>TAIR|locus:2138728 [details] [associations]
symbol:CRY1 "cryptochrome 1" species:3702 "Arabidopsis
thaliana" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=NAS]
[GO:0009637 "response to blue light" evidence=RCA;IMP;NAS]
[GO:0009785 "blue light signaling pathway" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009640
"photomorphogenesis" evidence=IMP] [GO:0051510 "regulation of
unidimensional cell growth" evidence=IMP] [GO:0004672 "protein
kinase activity" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IDA] [GO:0046777 "protein autophosphorylation"
evidence=RCA;IDA] [GO:0055114 "oxidation-reduction process"
evidence=IMP] [GO:0042802 "identical protein binding" evidence=IPI]
[GO:0042803 "protein homodimerization activity" evidence=IPI]
[GO:0009414 "response to water deprivation" evidence=IGI]
[GO:0010118 "stomatal movement" evidence=IGI] [GO:0010343 "singlet
oxygen-mediated programmed cell death" evidence=IMP] [GO:0046283
"anthocyanin-containing compound metabolic process" evidence=IMP]
[GO:0010617 "circadian regulation of calcium ion oscillation"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0010075
"regulation of meristem growth" evidence=IGI] [GO:0009583
"detection of light stimulus" evidence=IMP] [GO:0010155 "regulation
of proton transport" evidence=RCA] [GO:0009882 "blue light
photoreceptor activity" evidence=IMP] InterPro:IPR002081
InterPro:IPR005101 InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147
PROSITE:PS00394 PROSITE:PS00691 InterPro:IPR006050 Pfam:PF00875
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0009414 GO:GO:0006281 GO:GO:0046777
GO:GO:0009640 GO:GO:0010118 GO:GO:0004672 GO:GO:0018298
GO:GO:0055114 EMBL:AL161513 Gene3D:3.40.50.620 InterPro:IPR014729
EMBL:AF128396 GO:GO:0010075 GO:GO:0046283 GO:GO:0051510
eggNOG:COG0415 GO:GO:0009882 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 PROSITE:PS51645 EMBL:S66907 EMBL:S66909
EMBL:AF361588 EMBL:AY124863 IPI:IPI00529765 PIR:H85089 PIR:S39058
RefSeq:NP_567341.1 UniGene:At.27730 PDB:1U3C PDB:1U3D PDBsum:1U3C
PDBsum:1U3D DisProt:DP00474 ProteinModelPortal:Q43125 SMR:Q43125
IntAct:Q43125 MINT:MINT-192438 STRING:Q43125 PaxDb:Q43125
PRIDE:Q43125 EnsemblPlants:AT4G08920.1 GeneID:826470
KEGG:ath:AT4G08920 TAIR:At4g08920 HOGENOM:HOG000245621
InParanoid:Q43125 KO:K12118 OMA:CKVDFWL ProtClustDB:CLSN2681786
EvolutionaryTrace:Q43125 Genevestigator:Q43125 GermOnline:AT4G08920
GO:GO:0010617 GO:GO:0009583 GO:GO:0010343 InterPro:IPR020978
InterPro:IPR014134 Pfam:PF12546 TIGRFAMs:TIGR02766 Uniprot:Q43125
Length = 681
Score = 1747 (620.0 bits), Expect = 5.5e-180, P = 5.5e-180
Identities = 326/610 (53%), Positives = 435/610 (71%)
Query: 3 GNRTIVWFRRDLRIEDNPALAAAARDGSVFPVYTWCPKEEGQFYPGRVSRWWLKQSLSYL 62
G +IVWFRRDLR+EDNPALAAA R G V ++ W P+EEG ++PGRVSRWWLK SL+ L
Sbjct: 11 GGCSIVWFRRDLRVEDNPALAAAVRAGPVIALFVWAPEEEGHYHPGRVSRWWLKNSLAQL 70
Query: 63 GQSLKSLGAELVLFKTESTLAALLECISAIKATKVVFNHLYDPVSLVRDHSIKEKLVELG 122
SL+SLG L+ ++ ++A+LL+ + + A+++ FNHLYDP+SLVRDH K+ L G
Sbjct: 71 DSSLRSLGTCLITKRSTDSVASLLDVVKSTGASQIFFNHLYDPLSLVRDHRAKDVLTAQG 130
Query: 123 ISVQSYNGDLLYEPWEIYDERGHAFTTFDAYWDKCLQMQMEPAS-ILPPWRLVQAAGTID 181
I+V+S+N DLLYEPWE+ DE G F+ F A+W++CL M +P S +LPP +++ +G +
Sbjct: 131 IAVRSFNADLLYEPWEVTDELGRPFSMFAAFWERCLSMPYDPESPLLPPKKII--SGDVS 188
Query: 182 GCSIEDLGLEDESEKSSNALLGRGWSPGWSNADKVLTEFVEQHLLRYYKNRQKLGGNSTS 241
C + L ED+SEK SNALL R WSPGWSN DK LT F+ LL Y KNR+K +TS
Sbjct: 189 KCVADPLVFEDDSEKGSNALLARAWSPGWSNGDKALTTFINGPLLEYSKNRRKADSATTS 248
Query: 242 LLSPYLHFGELSVRKVFQCLWMKQILWAKEENFEGKESVTFFLRAMGLREYSRYLCFNFP 301
LSP+LHFGE+SVRKVF + +KQ+ WA E N G+ESV FL+++GLREYSRY+ FN P
Sbjct: 249 FLSPHLHFGEVSVRKVFHLVRIKQVAWANEGNEAGEESVNLFLKSIGLREYSRYISFNHP 308
Query: 302 FTHERPLLSNLKYFPWHADLGNFKAWRQGRTGYPLVDAGMRELWATGWIHNRIRVIVSSF 361
++HERPLL +LK+FPW D FKAWRQGRTGYPLVDAGMRELWATGW+H+RIRV+VSSF
Sbjct: 309 YSHERPLLGHLKFFPWAVDENYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSF 368
Query: 362 AVKVLLLPWRWGMKYFWDTLLDADLECDILGWQYISGSLPDGHELERLDSPEIQGSKFDP 421
VKVL LPWRWGMKYFWDTLLDADLE D LGWQYI+G+LPD E +R+D+P+ +G KFDP
Sbjct: 369 FVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYITGTLPDSREFDRIDNPQFEGYKFDP 428
Query: 422 EGEYVRQWLPELARMPTEWIHHPWDAPPNVLKAAGVELGLNYPKPIIDLDLGRERLTQAI 481
GEYVR+WLPEL+R+PT+WIHHPW+AP +VL+AAG+ELG NYP PI+ LD + RL +A+
Sbjct: 429 NGEYVRRWLPELSRLPTDWIHHPWNAPESVLQAAGIELGSNYPLPIVGLDEAKARLHEAL 488
Query: 482 FKMWEMEAADNAMDSNGTNEVVFDNSDRIQTPA-IPQVVLREKSTCPTISSN----DQKV 536
+MW++EAA A NG+ E + D+++ + P P+ + E++ ++ N DQ V
Sbjct: 489 SQMWQLEAASRAAIENGSEEGLGDSAEVEEAPIEFPRDITMEETEPTRLNPNRRYEDQMV 548
Query: 537 PSFQNGKNNLPSRKRPKNVEEERQYPDELYSCKNEAGNSGAH--DDFCSTAESSAAKRQT 594
PS + S RP+ EE + +N G+S A + +T ++ + +
Sbjct: 549 PSITS------SLIRPEEDEESS------LNLRNSVGDSRAEVPRNMVNTNQAQQRRAEP 596
Query: 595 TTN-ISFSVP 603
+N ++ +P
Sbjct: 597 ASNQVTAMIP 606
>TIGR_CMR|CBU_1176 [details] [associations]
symbol:CBU_1176 "deoxyribodipyrimidine photolyase - class
I" species:227377 "Coxiella burnetii RSA 493" [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147
PROSITE:PS00394 PROSITE:PS00691 InterPro:IPR006050 Pfam:PF00875
GO:GO:0006281 EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 SUPFAM:SSF52425
SUPFAM:SSF48173 HOGENOM:HOG000245621 OMA:CKVDFWL KO:K01669
GO:GO:0003904 RefSeq:NP_820171.1 HSSP:P00914
ProteinModelPortal:Q83CE4 GeneID:1209079 KEGG:cbu:CBU_1176
PATRIC:17931093 ProtClustDB:CLSK2394345
BioCyc:CBUR227377:GJ7S-1162-MONOMER Uniprot:Q83CE4
Length = 472
Score = 844 (302.2 bits), Expect = 2.7e-84, P = 2.7e-84
Identities = 182/476 (38%), Positives = 276/476 (57%)
Query: 6 TIVWFRRDLRIEDNPALAAAARDGS-VFPVYTWCPKEEGQFYPGRVSRWWLKQSLSYLGQ 64
TI WFR+DLR+ DNPAL AA+ + P+Y ++ G RWWL SLS L
Sbjct: 3 TIFWFRQDLRLSDNPALVEAAKSADHLIPLYIL---DDQLKMLGDAQRWWLHHSLSSLQT 59
Query: 65 SLKSLGAELVLFKTESTLAALLECISAIKATKVVFNHLYDPVSLVRDHSIKEKLVELGIS 124
+L G L+L K + T LLE I K K+ +N Y+P D ++ +L L S
Sbjct: 60 ALSKKGTSLILKKGD-TKRVLLELIKKYKVEKIYWNRSYEPPYREIDTYLENRLPPL--S 116
Query: 125 VQSYNGDLLYEPWEIYDERGHAFTTFDAYWDKCLQMQMEPASILPPWRLVQAAGTIDGCS 184
V+ Y+ LL EP +I ++ G + F +W K + ++P L + I +
Sbjct: 117 VEIYHSTLLTEPQKIKNKSGGYYKIFTPFW-KHINASLQPRKTLAAPKKFSQHRAIKSDN 175
Query: 185 IEDLGLEDESEKSSNALLGRGWSPGWSNADKVLTEFVEQHLLRYYKNRQKLGGNSTSLLS 244
+E L + S W PG NA VL +F++++L Y +R + +STS LS
Sbjct: 176 LETWNLLPKHPDWSQGF--DQWKPGEKNAQIVLKKFIKENLKNYPAHRDRPDISSTSHLS 233
Query: 245 PYLHFGELSVRKVFQCLWMKQILWAKEENFEGKESVTFFLRAMGLREYSRYLCFNFPFTH 304
PYLHFGE+S+R+V+ + I +++N + V FLR + RE++ YL ++FP
Sbjct: 234 PYLHFGEISIRQVWTAITQATI---QDKNLQKAADV--FLRQLIWREFAYYLLWHFPQMG 288
Query: 305 ERPLLSNLKYFPWHADLGNFKAWRQGRTGYPLVDAGMRELWATGWIHNRIRVIVSSFAVK 364
+ F W + +AW++G TGYP+VDAGMRELW TG++HNR+R+IV+SF VK
Sbjct: 289 RSNFRNQFDNFKWKKNKNWLRAWQKGLTGYPIVDAGMRELWCTGYMHNRVRMIVASFLVK 348
Query: 365 VLLLPWRWGMKYFWDTLLDADLECDILGWQYISGSLPDGHELERLDSPEIQGSKFDPEGE 424
L++ WR G K+FW+TLLDADL + LGWQ+I+G PD R+ +P +Q KFDP+G
Sbjct: 349 DLMIDWREGEKWFWNTLLDADLANNALGWQWIAGCGPDAAPYFRIFNPILQSKKFDPDGT 408
Query: 425 YVRQWLPELARMPTEWIHHPWDAPPNVLKAAGVELGLNYPKPIIDLDLGRERLTQA 480
Y+++W+PELA++P+++IH+P D P N+ +++ V LG++YP PI++ +E +A
Sbjct: 409 YIKRWIPELAKVPSKYIHYPADMPDNISESSKVNLGVDYPFPIVNHHKAKELALKA 464
>TIGR_CMR|BA_3180 [details] [associations]
symbol:BA_3180 "deoxyribodipyrimidine photolyase family
protein" species:198094 "Bacillus anthracis str. Ames" [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 Pfam:PF03441 PRINTS:PR00147 InterPro:IPR006050
Pfam:PF00875 EMBL:AE016879 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GO:GO:0006281 GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 HOGENOM:HOG000245621 KO:K01669 RefSeq:NP_845490.2
RefSeq:YP_029213.1 ProteinModelPortal:Q81NL2 DNASU:1086563
EnsemblBacteria:EBBACT00000013148 EnsemblBacteria:EBBACT00000022838
GeneID:1086563 GeneID:2852147 KEGG:ban:BA_3180 KEGG:bat:BAS2956
PATRIC:18783980 ProtClustDB:CLSK584502
BioCyc:BANT260799:GJAJ-3018-MONOMER Uniprot:Q81NL2
Length = 476
Score = 831 (297.6 bits), Expect = 6.4e-83, P = 6.4e-83
Identities = 179/486 (36%), Positives = 278/486 (57%)
Query: 4 NRTIVWFRRDLRIEDNPALAAAARDGSVFPVYTWCPKEEGQFYPGRVSRWWLKQSLSYLG 63
N+ IV F++D R+ DNPAL AA+ G V PVY + F G S+WWL ++ +
Sbjct: 3 NKIIVMFQKDFRLYDNPALFEAAQSGEVVPVYV----HDETFSMGSASKWWLHHAIIDVK 58
Query: 64 QSLKSLGAELVLFKTESTLAALLECISAIKATKVVFNHLYDPVSLVRDHSIKEKLVELGI 123
+ L++LG+ L++ K ST +L + + T V +N YDP L + +K L G+
Sbjct: 59 KQLEALGSTLIIRKG-STQEEILSLVEQLGITAVYWNICYDPDRLQSNQKMKMMLEHKGM 117
Query: 124 SVQSYNGDLLYEPWEIYDERGHAFTTFDAYWDKCLQMQM--EPASILPPWRLVQAAGTID 181
+ +N LL EPW I + + F +++ Q Q+ +P S + + ++ ++
Sbjct: 118 ICKEFNSHLLLEPWVIKKKDNTEYKVFTPFYN-AFQKQVIHKPISKV---QSIKGGNSLP 173
Query: 182 -GCSIEDLGLEDESEKSSNALLGRGWSPGWSNADKVLTEFVEQHLLRYYKNRQKLGGNST 240
S+ +L L +S+ + W P A K EF L Y + R N+
Sbjct: 174 VSLSVSELHLLPTIPWTSH--MESIWEPTEEGAYKTWKEFFSSKLASYSEGRDFPNQNAH 231
Query: 241 SLLSPYLHFGELSVRKVFQCLWMKQILWAKEENFEGKESVTFFLRAMGLREYSRYLCFNF 300
S+L+PYL FG++SV+ ++ L K ++ FE + V F+R + RE+S YL +++
Sbjct: 232 SMLAPYLSFGQISVKLIYHYLINKSTE-SQCSLFE--KQVNSFIRQLIWREFSYYLLYHY 288
Query: 301 PFTHERPLLSNLKYFPWHADLGNFKAWRQGRTGYPLVDAGMRELWATGWIHNRIRVIVSS 360
PFT +PL + ++FPW+ + + W++G TGYP +DAGMRELW TG++HNR R+ V+S
Sbjct: 289 PFTAYKPLNKSFEHFPWNNEEELLRVWQKGDTGYPFIDAGMRELWQTGFMHNRTRMAVAS 348
Query: 361 FAVKVLLLPWRWGMKYFWDTLLDADLECDILGWQYISGSLPDGHELERLDSPEIQGSKFD 420
F VK LL+PW+ G K+F DTLLDAD+ + +GWQ+++GS D R+ +P QG KFD
Sbjct: 349 FLVKHLLIPWQEGAKWFMDTLLDADIANNTMGWQWVAGSGADASPYFRIFNPITQGEKFD 408
Query: 421 PEGEYVRQWLPELARMPTEWIHHPWDAPPNVLKAAGVELGLNYPKPIIDLDLGRERLTQA 480
GEY+R+W+PEL MP ++IH PW+AP ++L+ A ++LG YP P++D RER A
Sbjct: 409 KNGEYIRKWVPELKDMPNKYIHKPWEAPEHILQKANIQLGHTYPLPVVDHKAARERALCA 468
Query: 481 IFKMWE 486
M E
Sbjct: 469 YKSMKE 474
>TIGR_CMR|SPO_1917 [details] [associations]
symbol:SPO_1917 "deoxyribodipyrimidine photolyase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147
PROSITE:PS00394 InterPro:IPR006050 Pfam:PF00875 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0006281 GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 SUPFAM:SSF52425
SUPFAM:SSF48173 HOGENOM:HOG000245621 OMA:CKVDFWL KO:K01669
GO:GO:0003904 RefSeq:YP_167152.1 ProteinModelPortal:Q5LS53
GeneID:3192692 KEGG:sil:SPO1917 PATRIC:23377163
ProtClustDB:CLSK933677 Uniprot:Q5LS53
Length = 481
Score = 590 (212.7 bits), Expect = 2.2e-57, P = 2.2e-57
Identities = 158/491 (32%), Positives = 239/491 (48%)
Query: 1 MGGNRTIV-WFRRDLRIEDNPALAAAARDGS-VFPVYTWCPKEEGQFYPGRVSRWWLKQS 58
M R I+ W RRDLR+ D+P LAAAA G V PV+ +E G + L
Sbjct: 1 MSETRAIIYWLRRDLRLADHPGLAAAAASGRPVVPVFI---HDESVAALGAAPAFRLGLG 57
Query: 59 LSYLGQSLKSLGAELVLFKTESTLAALLECISAIKATKVVFNHLYDPVSLVRDHSIKEKL 118
L G +L +G+ L+L + S A L I+ A V + Y P ++ RD ++K L
Sbjct: 58 LERFGATLGDMGSRLIL-RRGSAPAVLQALIAETGAGAVWWTREYTPQAITRDSALKTAL 116
Query: 119 VELGISVQSYNGDLLYEPWEIYDERGHAFTTFDAYWDKCLQMQME-----PASILPP--W 171
+ GI +S+ G LL+EPW + G + + +W Q ++ PA + PP W
Sbjct: 117 QQAGIEARSFGGALLFEPWTVETGAGGFYKVYTPFWRAVSQREVSAPDPAPARVRPPEAW 176
Query: 172 RLVQAAGTIDGCSIEDLGLEDESEKSSNALLGRGWSPGWSNADKVLTEFVEQHLLRYYKN 231
+A + D GL + + A++ +PG + A + L F+ + +Y
Sbjct: 177 PGSEA--------LSDWGLGAPMRRGA-AVVATHQAPGEAAALERLDRFIATGIGQYDAC 227
Query: 232 RQKLGGNSTSLLSPYLHFGELSVRKVFQCLWMKQILWAKEENFEGKESVTFFLRAMGLRE 291
R G+ TS LS L GE+ R LW + A E +G + FL+ + R+
Sbjct: 228 RDLPAGDGTSTLSDALSLGEIGPRT----LWHR----AGEAAHKGAQGAETFLKQLVWRD 279
Query: 292 YSRYLCFNFPFTHERPLLSNLKYFPWHADLGN--FKAWRQGRTGYPLVDAGMRELWATGW 349
++ +L ++ P + FPW D + F AW +GRTG PLVDA MRE++ TG
Sbjct: 280 FAYHLMYHTPHLLSENWRPGWEVFPWATDPADPGFVAWTRGRTGVPLVDAAMREMYVTGR 339
Query: 350 IHNRIRVIVSSFAVKVLLLPWRWGMKYFWDTLLDADLECDILGWQYISGSLPDGHELERL 409
+HNR R+I +S+ K L++ W+ GM +F D L D D + +GWQ+++G PD R+
Sbjct: 340 MHNRARMIAASYLTKHLMVHWKLGMDWFADCLTDWDPAANAMGWQWVAGCGPDAAPYFRI 399
Query: 410 DSPEIQGSKFDPEGEYVRQWLPELARMPTEWIHHPWDAPPNVLKAAGVELGLNYPKPIID 469
+PE Q KFDP+G Y W+ E P +DA P ++ + +YP PI+
Sbjct: 400 FNPETQAKKFDPKGRYRNHWIAEGQAEPPRAALSYFDAVP---RSWNLRPDASYPPPIMA 456
Query: 470 LDLGRERLTQA 480
LD GR R A
Sbjct: 457 LDQGRRRALSA 467
>UNIPROTKB|Q9KNA8 [details] [associations]
symbol:phrA "Deoxyribodipyrimidine photo-lyase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0003904 "deoxyribodipyrimidine photo-lyase activity"
evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS]
InterPro:IPR002081 InterPro:IPR005101 InterPro:IPR018394
Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394 PROSITE:PS00691
InterPro:IPR006050 Pfam:PF00875 GO:GO:0003677 GO:GO:0006281
EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 OMA:CKVDFWL
KO:K01669 GO:GO:0003904 PIR:G82505 RefSeq:NP_232458.1
ProteinModelPortal:Q9KNA8 DNASU:2612142 GeneID:2612142
KEGG:vch:VCA0057 PATRIC:20084701 ProtClustDB:CLSK869480
Uniprot:Q9KNA8
Length = 469
Score = 528 (190.9 bits), Expect = 8.3e-51, P = 8.3e-51
Identities = 145/482 (30%), Positives = 230/482 (47%)
Query: 7 IVWFRRDLRIEDNPALAAAARDGS-VFPVYTWCPKEEGQFYPGRVSRWWLKQSLSYLGQS 65
+VWFRRDLR DN AL AA G V +Y P++ Q + + + + L+ L Q
Sbjct: 3 LVWFRRDLRSFDNTALTAALNSGDPVAAMYIATPEQWHQHHLAPIQADLIWRRLAELQQE 62
Query: 66 LKSLGAELVLFKT---ESTLAALLECISAIKATKVVFNHLYDPVSLVRDHSIKEKLVELG 122
L +L L + ++ A+ + + AT+V+ N Y+ RD ++ L E G
Sbjct: 63 LAALNVPLFYQQVADFQAAAVAVSQLAKTLNATQVLANRDYELDEQQRDQLAQQLLSEQG 122
Query: 123 ISVQSYNGDLLYEPWEIYDERGHAFTTFDAYWDKCLQMQMEPASILPPWRLVQAAGTIDG 182
I +++ + P + ++G F F + L + P ++ R V A +
Sbjct: 123 IIWSAFDDKCVLPPGSVRTKQGEFFKVFTPFKRAWLTLFQPP--VIGKNRPV-ALWNVPS 179
Query: 183 CSIEDLGLEDESEKSSNALLGRGWSPGWSNADKVLTEFVEQHLLRYYKNRQKLGGNSTSL 242
++ +L E + W+ + L +F + + Y++ R TS
Sbjct: 180 -ALAELVWHPEQAFDYPRIDSTPWAADFETVRAQLRDFCRERVQDYHQARDFPAREGTSS 238
Query: 243 LSPYLHFGELSVRKVFQCLWMKQILWAKEENFEGKESVTFFLRAMGLREYSRYLCFNFP- 301
LSPYL G LS R QC+ L+ + E E +L + RE+ ++L P
Sbjct: 239 LSPYLAIGVLSAR---QCVAR---LYHESSMGELSEGAQVWLSELIWREFYQHLVAIEPN 292
Query: 302 FTHERPLLSNLKYFPWHADLGNFKAWRQGRTGYPLVDAGMRELWATGWIHNRIRVIVSSF 361
+ R + W D F+ W +G+TGYP+VDA MR+L TGW+HNR+R+IV+SF
Sbjct: 293 LSKSRDFVEWGARLEWWNDNEKFQLWCEGKTGYPIVDAAMRQLNQTGWMHNRLRMIVASF 352
Query: 362 AVKVLLLPWRWGMKYFWDTLLDADLECDILGWQYISGSLPDGHELERLDSPEIQGSKFDP 421
K L + WRWG +YF L+D D + GWQ+ + + DG R+ +P QG KFDP
Sbjct: 353 LTKDLHIDWRWGERYFMSRLIDGDYAANNGGWQWCASTGCDGQPYFRIFNPVSQGEKFDP 412
Query: 422 EGEYVRQWLPELARMPTEWIHHPWDAPPNVLKAAGVELGLNYPKPIIDLDLGRERLTQAI 481
G+++R+W+PEL + + +IH PW P A L YP ++D RE +T +
Sbjct: 413 NGDFIRRWVPELRSVSSAYIHQPWTYP-----AVNSVL---YPARLVDHKQERE-VTLRL 463
Query: 482 FK 483
+K
Sbjct: 464 YK 465
>TIGR_CMR|VC_A0057 [details] [associations]
symbol:VC_A0057 "deoxyribodipyrimidine photolyase,
cyclobutane pyrimidine dimer-specific" species:686 "Vibrio cholerae
O1 biovar El Tor" [GO:0003904 "deoxyribodipyrimidine photo-lyase
activity" evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS]
InterPro:IPR002081 InterPro:IPR005101 InterPro:IPR018394
Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394 PROSITE:PS00691
InterPro:IPR006050 Pfam:PF00875 GO:GO:0003677 GO:GO:0006281
EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 OMA:CKVDFWL
KO:K01669 GO:GO:0003904 PIR:G82505 RefSeq:NP_232458.1
ProteinModelPortal:Q9KNA8 DNASU:2612142 GeneID:2612142
KEGG:vch:VCA0057 PATRIC:20084701 ProtClustDB:CLSK869480
Uniprot:Q9KNA8
Length = 469
Score = 528 (190.9 bits), Expect = 8.3e-51, P = 8.3e-51
Identities = 145/482 (30%), Positives = 230/482 (47%)
Query: 7 IVWFRRDLRIEDNPALAAAARDGS-VFPVYTWCPKEEGQFYPGRVSRWWLKQSLSYLGQS 65
+VWFRRDLR DN AL AA G V +Y P++ Q + + + + L+ L Q
Sbjct: 3 LVWFRRDLRSFDNTALTAALNSGDPVAAMYIATPEQWHQHHLAPIQADLIWRRLAELQQE 62
Query: 66 LKSLGAELVLFKT---ESTLAALLECISAIKATKVVFNHLYDPVSLVRDHSIKEKLVELG 122
L +L L + ++ A+ + + AT+V+ N Y+ RD ++ L E G
Sbjct: 63 LAALNVPLFYQQVADFQAAAVAVSQLAKTLNATQVLANRDYELDEQQRDQLAQQLLSEQG 122
Query: 123 ISVQSYNGDLLYEPWEIYDERGHAFTTFDAYWDKCLQMQMEPASILPPWRLVQAAGTIDG 182
I +++ + P + ++G F F + L + P ++ R V A +
Sbjct: 123 IIWSAFDDKCVLPPGSVRTKQGEFFKVFTPFKRAWLTLFQPP--VIGKNRPV-ALWNVPS 179
Query: 183 CSIEDLGLEDESEKSSNALLGRGWSPGWSNADKVLTEFVEQHLLRYYKNRQKLGGNSTSL 242
++ +L E + W+ + L +F + + Y++ R TS
Sbjct: 180 -ALAELVWHPEQAFDYPRIDSTPWAADFETVRAQLRDFCRERVQDYHQARDFPAREGTSS 238
Query: 243 LSPYLHFGELSVRKVFQCLWMKQILWAKEENFEGKESVTFFLRAMGLREYSRYLCFNFP- 301
LSPYL G LS R QC+ L+ + E E +L + RE+ ++L P
Sbjct: 239 LSPYLAIGVLSAR---QCVAR---LYHESSMGELSEGAQVWLSELIWREFYQHLVAIEPN 292
Query: 302 FTHERPLLSNLKYFPWHADLGNFKAWRQGRTGYPLVDAGMRELWATGWIHNRIRVIVSSF 361
+ R + W D F+ W +G+TGYP+VDA MR+L TGW+HNR+R+IV+SF
Sbjct: 293 LSKSRDFVEWGARLEWWNDNEKFQLWCEGKTGYPIVDAAMRQLNQTGWMHNRLRMIVASF 352
Query: 362 AVKVLLLPWRWGMKYFWDTLLDADLECDILGWQYISGSLPDGHELERLDSPEIQGSKFDP 421
K L + WRWG +YF L+D D + GWQ+ + + DG R+ +P QG KFDP
Sbjct: 353 LTKDLHIDWRWGERYFMSRLIDGDYAANNGGWQWCASTGCDGQPYFRIFNPVSQGEKFDP 412
Query: 422 EGEYVRQWLPELARMPTEWIHHPWDAPPNVLKAAGVELGLNYPKPIIDLDLGRERLTQAI 481
G+++R+W+PEL + + +IH PW P A L YP ++D RE +T +
Sbjct: 413 NGDFIRRWVPELRSVSSAYIHQPWTYP-----AVNSVL---YPARLVDHKQERE-VTLRL 463
Query: 482 FK 483
+K
Sbjct: 464 YK 465
>UNIPROTKB|P00914 [details] [associations]
symbol:phr "deoxyribodipyrimidine photolyase
(photoreactivation)" species:83333 "Escherichia coli K-12"
[GO:0018298 "protein-chromophore linkage" evidence=IEA;IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003904 "deoxyribodipyrimidine
photo-lyase activity" evidence=IEA;IDA] [GO:0006281 "DNA repair"
evidence=IEA] InterPro:IPR002081 InterPro:IPR005101
InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
PROSITE:PS00691 EMBL:K01299 InterPro:IPR006050 Pfam:PF00875
GO:GO:0000166 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0003677 GO:GO:0006281 GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645
HOGENOM:HOG000245621 OMA:CKVDFWL KO:K01669 GO:GO:0003904
EMBL:X57399 PIR:A01137 RefSeq:NP_415236.1 RefSeq:YP_488988.1
PDB:1DNP PDBsum:1DNP ProteinModelPortal:P00914 SMR:P00914
DIP:DIP-10505N IntAct:P00914 MINT:MINT-1302006 PRIDE:P00914
EnsemblBacteria:EBESCT00000003526 EnsemblBacteria:EBESCT00000003527
EnsemblBacteria:EBESCT00000016976 GeneID:12930926 GeneID:947005
KEGG:ecj:Y75_p0688 KEGG:eco:b0708 PATRIC:32116611 EchoBASE:EB0729
EcoGene:EG10736 ProtClustDB:PRK10674 BioCyc:EcoCyc:EG10736-MONOMER
BioCyc:ECOL316407:JW0698-MONOMER BioCyc:MetaCyc:EG10736-MONOMER
SABIO-RK:P00914 EvolutionaryTrace:P00914 Genevestigator:P00914
Uniprot:P00914
Length = 472
Score = 524 (189.5 bits), Expect = 2.2e-50, P = 2.2e-50
Identities = 148/473 (31%), Positives = 235/473 (49%)
Query: 7 IVWFRRDLRIEDNPALAAAARDGS--VFPVYTWCPKEEGQFYPGRVSRWWLKQSLSYLGQ 64
+VWFR+DLR+ DN ALAAA R+ S V +Y P++ + L+ L
Sbjct: 5 LVWFRQDLRLHDNLALAAACRNSSARVLALYIATPRQWATHNMSPRQAELINAQLNGLQI 64
Query: 65 SLKSLGAELVLFKTESTLAALLECISAIKA----TKVVFNHLYDPVSLVRDHSIKEKLVE 120
+L G L LF+ A +E + + A T + +N+ Y+ RD ++ L
Sbjct: 65 ALAEKGIPL-LFREVDDFVASVEIVKQVCAENSVTHLFYNYQYEVNERARDVEVERAL-- 121
Query: 121 LGISVQSYNGDLLYEPWEIYD---ERGHAFTTFDAYWDKCLQMQMEPASILPPWRLVQAA 177
+ + ++ ++ P + E FT F W K L+ M P + P V+++
Sbjct: 122 RNVVCEGFDDSVILPPGAVMTGNHEMYKVFTPFKNAWLKRLREGM-PECVAAP--KVRSS 178
Query: 178 GTIDGCSIEDLGLEDESEKSSNALLGRGWSPGWSNADKVLTEFVEQHLLRYYKNRQKLGG 237
G+I+ L +S +++ + A L +F + Y + R
Sbjct: 179 GSIEPSPSITLNYPRQSFDTAHFPVEE------KAAIAQLRQFCQNGAGEYEQQRDFPAV 232
Query: 238 NSTSLLSPYLHFGELSVRKVFQCLWMKQILWAKEENFEGKESVTFFLRAMGLREYSRYLC 297
TS LS L G LS R QCL ++L + + +G + +L + RE+ R+L
Sbjct: 233 EGTSRLSASLATGGLSPR---QCL--HRLLAEQPQALDGGAG-SVWLNELIWREFYRHLI 286
Query: 298 FNFP-FTHERPLLSNLKYFPWHADLGNFKAWRQGRTGYPLVDAGMRELWATGWIHNRIRV 356
P RP ++ W ++ + +AW++G+TGYP+VDA MR+L +TGW+HNR+R+
Sbjct: 287 TYHPSLCKHRPFIAWTDRVQWQSNPAHLQAWQEGKTGYPIVDAAMRQLNSTGWMHNRLRM 346
Query: 357 IVSSFAVKVLLLPWRWGMKYFWDTLLDADLECDILGWQYISGSLPDGHELERLDSPEIQG 416
I +SF VK LL+ WR G +YF L+D DL + GWQ+ + + D R+ +P QG
Sbjct: 347 ITASFLVKDLLIDWREGERYFMSQLIDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQG 406
Query: 417 SKFDPEGEYVRQWLPELARMPTEWIHHPWDAPPNVLKAAGVELGLNYPKPIID 469
KFD EGE++RQWLPEL +P + +H PW + AGV L +YP+PI++
Sbjct: 407 EKFDHEGEFIRQWLPELRDVPGKVVHEPW----KWAQKAGVTL--DYPQPIVE 453
>TAIR|locus:2093217 [details] [associations]
symbol:UVR3 "UV REPAIR DEFECTIVE 3" species:3702
"Arabidopsis thaliana" [GO:0003913 "DNA photolyase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM]
[GO:0003914 "DNA (6-4) photolyase activity" evidence=ISS;IDA]
[GO:0009411 "response to UV" evidence=IMP] InterPro:IPR005101
Pfam:PF03441 PROSITE:PS00394 PROSITE:PS00691 InterPro:IPR006050
Pfam:PF00875 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009411
GO:GO:0000166 GO:GO:0003677 GO:GO:0006281 EMBL:AB017071
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
HOGENOM:HOG000245622 KO:K02295 SUPFAM:SSF52425 SUPFAM:SSF48173
PROSITE:PS51645 EMBL:AB003687 EMBL:AB017331 IPI:IPI00545198
IPI:IPI00657032 RefSeq:NP_001030703.1 RefSeq:NP_566520.1
UniGene:At.188 PDB:3FY4 PDBsum:3FY4 ProteinModelPortal:O48652
SMR:O48652 STRING:O48652 EnsemblPlants:AT3G15620.1 GeneID:820804
KEGG:ath:AT3G15620 GeneFarm:1941 TAIR:At3g15620 InParanoid:O48652
OMA:CLSARTF PhylomeDB:O48652 ProtClustDB:CLSN2688412
BioCyc:MetaCyc:MONOMER-15021 EvolutionaryTrace:O48652
Genevestigator:O48652 GO:GO:0003914 Uniprot:O48652
Length = 556
Score = 520 (188.1 bits), Expect = 5.8e-50, P = 5.8e-50
Identities = 161/534 (30%), Positives = 257/534 (48%)
Query: 3 GNRTIVWFRRDLRIEDNPALAAAARDGS-VFPVYTWCP----KEEGQFYPGR----VSRW 53
G+ +++WFR+ LR+ DNPAL A++ ++PV+ P + F PG V+R
Sbjct: 23 GSGSLIWFRKGLRVHDNPALEYASKGSEFMYPVFVIDPHYMESDPSAFSPGSSRAGVNRI 82
Query: 54 -WLKQSLSYLGQSLKSLGAELVLFKTESTLAALLECISAIKATKVVFNHLYDPVSLVRDH 112
+L +SL L SLK LG+ L++FK E L+ C+ K ++ F + DP D
Sbjct: 83 RFLLESLKDLDSSLKKLGSRLLVFKGEPG-EVLVRCLQEWKVKRLCFEYDTDPYYQALDV 141
Query: 113 SIKEKLVELGISVQSYNGDLLYEPWEIYDERGH----AFTTF--DAYWDKCLQMQMEPA- 165
+K+ G+ V S L+ P I ++ G ++ +F A C + ++ +
Sbjct: 142 KVKDYASSTGVEVFSPVSHTLFNPAHIIEKNGGKPPLSYQSFLKVAGEPSCAKSELVMSY 201
Query: 166 SILPPWRLVQAAGTIDGCSIEDLGLEDESEKSSNALLGRGWSPGWSNADKVLTEFVEQHL 225
S LPP + G + S+E+LG +D+ + G G S A K LT+ +
Sbjct: 202 SSLPPIGDIGNLGISEVPSLEELGYKDDEQADWTPFRG-----GESEALKRLTKSISDKA 256
Query: 226 LRYYKNRQKLGGN-------STSLLSPYLHFGELSVRKVFQCLWMKQILWAKEENFEGKE 278
+ N +K G+ +T+++SPYL FG LS R +QCL Q ++ K+
Sbjct: 257 --WVANFEKPKGDPSAFLKPATTVMSPYLKFGCLSSRYFYQCL---QNIY-KDVKKHTSP 310
Query: 279 SVTFFLRAMGLREYSRYLCFNFPFTHERPLLSNLKYFPWHADLGNFKAWRQGRTGYPLVD 338
V+ L + RE+ F P + K PW+ D AWR G+TGYP +D
Sbjct: 311 PVSL-LGQLLWREFFYTTAFGTPNFDKMKGNRICKQIPWNEDHAMLAAWRDGKTGYPWID 369
Query: 339 AGMRELWATGWIHNRIRVIVSSFAVKV-LLLPWRWGMKYFWDTLLDADLECDILGWQYIS 397
A M +L GW+H+ R V+ F + L + W G F L+D+D + W ++S
Sbjct: 370 AIMVQLLKWGWMHHLARHCVACFLTRGDLFIHWEQGRDVFERLLIDSDWAINNGNWMWLS 429
Query: 398 GSLPDGHELERLDSPEIQGSKFDPEGEYVRQWLPELARMPTEWIHHPWDAPPNVLKAAGV 457
S ++ R+ SP G K+DP+G+Y+R +LP L MP ++I+ PW AP +V A
Sbjct: 430 CS-SFFYQFNRIYSPISFGKKYDPDGKYIRHFLPVLKDMPKQYIYEPWTAPLSVQTKANC 488
Query: 458 ELGLNYPKPIIDLDLGRERLTQAIFKMWEMEAADNAMDSNGTNEVVFDNSDRIQ 511
+G +YPKP++ D + + KM E A + MD E + D ++Q
Sbjct: 489 IVGKDYPKPMVLHDSASKECKR---KMGEAYALNKKMDGKVDEENLRDLRRKLQ 539
>UNIPROTKB|Q48MU1 [details] [associations]
symbol:phrB "Deoxyribodipyrimidine photolyase"
species:264730 "Pseudomonas syringae pv. phaseolicola 1448A"
[GO:0003904 "deoxyribodipyrimidine photo-lyase activity"
evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS]
InterPro:IPR002081 InterPro:IPR005101 InterPro:IPR018394
Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394 InterPro:IPR006050
Pfam:PF00875 GO:GO:0006281 GO:GO:0018298 EMBL:CP000058
GenomeReviews:CP000058_GR Gene3D:3.40.50.620 InterPro:IPR014729
eggNOG:COG0415 SUPFAM:SSF52425 SUPFAM:SSF48173 HOGENOM:HOG000245621
OMA:CKVDFWL KO:K01669 GO:GO:0003904 RefSeq:YP_273281.1
ProteinModelPortal:Q48MU1 STRING:Q48MU1 GeneID:3555718
KEGG:psp:PSPPH_1010 PATRIC:19971112 ProtClustDB:CLSK868818
Uniprot:Q48MU1
Length = 482
Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
Identities = 146/487 (29%), Positives = 234/487 (48%)
Query: 7 IVWFRRDLRIEDNPALAAAARDGSVFPVYTWCPKEEGQFYPGRVS-RWWLKQSLSYLGQS 65
++W R DLR+ DN AL AA G VY P + +WL+ +L L ++
Sbjct: 3 LIWLRSDLRVHDNTALTAAMERGPTLAVYLLSPAQWRSHDDADCKVDFWLR-NLVELEKA 61
Query: 66 LKSLGAELVLFKTESTLAA--LLECI-SAIKATKVVFNHLYDPVSLVRDHSIKEKLVELG 122
L +L L++ + ++ A +L + + +K + N Y RD ++++ L + G
Sbjct: 62 LGALNVPLLIREADTWDQAPEVLSTLCTQLKIEGLHLNQEYGINETRRDQAVQKALEKAG 121
Query: 123 ISVQSYNGDLLYEPWEIYDERGHAFTTFDAYWDKCLQMQMEPASILP-PWRLVQAAGTID 181
+ V SY LL++P I + G+ F F + C +M A +P P R +A ++
Sbjct: 122 VQVTSYLDQLLFKPGSILTKTGNYFQVFTQFKKVCYN-RMHQA--MPQPVRTPKAQQSL- 177
Query: 182 GCSIEDLGLEDESE--KSSNALLGRGWSPGWSNADKVLTEFVEQHLLRYYKNRQKLGGN- 238
SI+ + D+ E + + L W G + A + + F + + YYK +
Sbjct: 178 --SIKSDSIPDQVEGFATPSKALRDLWPAGEAEARRRMATFADAQI-SYYKTERDFPAKP 234
Query: 239 STSLLSPYLHFGELSVRKVFQCLWMKQILWAKEENFE-GKESVTFFLRAMGLREYSRYLC 297
TS LS YL G +S R QCL L + + FE G ++ + RE+ ++
Sbjct: 235 GTSQLSAYLAAGVISPR---QCL--HAALGSNQGEFETGDVGTVTWINELLWREFYKHTL 289
Query: 298 FNFP-FTHERPLLSNLKYFPWHADLGNFKAWRQGRTGYPLVDAGMRELWATGWIHNRIRV 356
+P + R + W AW++ RTG P++DA MR+L TGW+HNR+R+
Sbjct: 290 VGYPRVSRHRAFRPETEALKWRDAPEELLAWQEARTGLPIIDAAMRQLLETGWMHNRLRM 349
Query: 357 IVSSFAVKVLLLPWRWGMKYFWDTLLDADLECDILGWQYISGSLPDGHELERLDSPEIQG 416
+V+ F K LL+ W G ++F L+D DL + GWQ+ S + D R+ +P Q
Sbjct: 350 VVAMFLTKNLLIDWHEGERFFMRHLIDGDLASNNGGWQWSSSTGTDSAPYFRIFNPLSQS 409
Query: 417 SKFDPEGEYVRQWLPELARMPTEWIHHPWDAPPNVLKAAGVELGLNYPKPIIDLDLGRER 476
+FDPEG ++++WLPELA + + IH P G+ +YPKPI+DL R R
Sbjct: 410 ERFDPEGVFIKRWLPELADLNKKQIHDP-------ASIGGLFGAADYPKPIVDLSKSRAR 462
Query: 477 LTQAIFK 483
A FK
Sbjct: 463 ALAA-FK 468
>ZFIN|ZDB-GENE-010426-8 [details] [associations]
symbol:cry5 "cryptochrome 5" species:7955 "Danio
rerio" [GO:0006281 "DNA repair" evidence=IEA;IDA] [GO:0003913 "DNA
photolyase activity" evidence=IEA] [GO:0009416 "response to light
stimulus" evidence=IDA] [GO:0016829 "lyase activity" evidence=IEA]
[GO:0003914 "DNA (6-4) photolyase activity" evidence=IDA]
InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875
ZFIN:ZDB-GENE-010426-8 GO:GO:0006281 GO:GO:0009416
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
HOGENOM:HOG000245622 SUPFAM:SSF52425 SUPFAM:SSF48173
HOVERGEN:HBG053470 GO:GO:0003914 EMBL:BC044204 IPI:IPI00634330
UniGene:Dr.82314 ProteinModelPortal:Q7ZU36 STRING:Q7ZU36
InParanoid:Q7ZU36 OrthoDB:EOG4G4GQ9 ArrayExpress:Q7ZU36
Uniprot:Q7ZU36
Length = 545
Score = 461 (167.3 bits), Expect = 1.0e-43, P = 1.0e-43
Identities = 154/492 (31%), Positives = 232/492 (47%)
Query: 4 NRTIVWFRRDLRIEDNPALAAAARD-GSVFPVYT---WCPKEEGQFYPGRVSRW-WLKQS 58
+ TI WFR+ LR+ DNPAL AA +D ++P++ W PK G ++RW +L ++
Sbjct: 29 HNTIHWFRKGLRLHDNPALIAALKDCRHIYPLFLLDPWFPKNTRI---G-INRWRFLIEA 84
Query: 59 LSYLGQSLKSLGAELVLFKTESTLAALLECISAIKATKVVFNHLYDPVSLVRDHSIKEKL 118
L L SLK L + L + + T L + K T++ F +P S RD + +
Sbjct: 85 LKDLDSSLKKLNSRLFVVRGSPT-EVLPKLFKQWKITRLTFEVDTEPYSQSRDKEVMKLA 143
Query: 119 VELGISVQSYNGDLLYEPWEIYDER-GHAFTTFDAYWDKCLQMQMEPASILP-P----WR 172
E G+ V LY I DE G T+ ++ P +P P R
Sbjct: 144 KEYGVEVTPKISHTLYNIDRIIDENNGKTPMTYIRL-QSVVKAMGHPKKPIPAPTNEDMR 202
Query: 173 LVQAAGTID-----GC-SIEDLGLEDESEKSSNALLGRGWSPGWSN-ADKVLTEFVEQH- 224
V + D G ++EDLGL+ S LG PG A + L E +E+
Sbjct: 203 GVSTPLSDDHEEKFGIPTLEDLGLDTSS-------LGPHLFPGGEQEALRRLDEHMERTN 255
Query: 225 -LLRYYKNRQKLGG--NSTSLLSPYLHFGELSVRKVFQCLWMKQILWAKEENFEGK--ES 279
+ ++ K + ST++LSPY+ FG LS R +F W W + + GK
Sbjct: 256 WVCKFEKPKTSPNSLIPSTTVLSPYVRFGCLSAR-IF---W-----WRLADVYRGKTHSD 306
Query: 280 VTFFLRAMGL-REYSRYLCFNFPFTHERPLLSNLKYFPWHADLGNFKAWRQGRTGYPLVD 338
L L RE+ P ++ S W + + AWR+ RTG+P +D
Sbjct: 307 PPVSLHGQLLWREFFYTTAVGIPNFNKMEGNSACVQVDWDNNPEHLAAWREARTGFPFID 366
Query: 339 AGMRELWATGWIHNRIRVIVSSFAVKV-LLLPWRWGMKYFWDTLLDADLECDILGWQYIS 397
A M +L GWIH+ R V+ F + L + W G K F + LLD+D + WQ++S
Sbjct: 367 AIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGQKVFEELLLDSDWSLNAGNWQWLS 426
Query: 398 GSLPDGHELERLDSPEIQGSKFDPEGEYVRQWLPELARMPTEWIHHPWDAPPNVLKAAGV 457
S H+ R+ SP G K D G+Y++++LP L + PTE+I+ PW AP +V + AG
Sbjct: 427 AST-FFHQYFRVYSPIAFGKKTDKHGDYIKKYLPVLKKFPTEYIYEPWKAPRSVQERAGC 485
Query: 458 ELGLNYPKPIID 469
+G +YP+PI+D
Sbjct: 486 IVGKDYPRPIVD 497
>TIGR_CMR|SO_3384 [details] [associations]
symbol:SO_3384 "deoxyribodipyrimidine photolyase"
species:211586 "Shewanella oneidensis MR-1" [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147
PROSITE:PS00394 PROSITE:PS00691 InterPro:IPR006050 Pfam:PF00875
GO:GO:0006281 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 SUPFAM:SSF52425
SUPFAM:SSF48173 HOGENOM:HOG000245621 KO:K01669 GO:GO:0003904
HSSP:P00914 RefSeq:NP_718938.1 ProteinModelPortal:Q8EBW1
GeneID:1171062 KEGG:son:SO_3384 PATRIC:23526448 OMA:WISELAW
ProtClustDB:CLSK907140 Uniprot:Q8EBW1
Length = 512
Score = 455 (165.2 bits), Expect = 4.5e-43, P = 4.5e-43
Identities = 132/463 (28%), Positives = 218/463 (47%)
Query: 34 VYTWCPKEEGQFYPGRVSRWWLKQSLSYLGQSLKSLGAELVLFKTES--TLAALLECISA 91
+Y P + Q + ++++ ++ L Q L SLG E L + +S + A L
Sbjct: 46 IYIATPSQWHQHDIAPIQLDFIQRHVNLLAQGLVSLGVEFELIQLDSFRDIPAFLTSYCE 105
Query: 92 IKATKVVFNHLYDPVSLVRDHSIKEKLVELGISVQSYNGDLLYEPWEIYDERG---HAFT 148
+ VF +P + + + VE GI + + L P + + G FT
Sbjct: 106 EHSIGRVFAG-QEPE--INEQKRDQACVEAGIPLSLSDEHCLLPPGTVLNLSGDMYRVFT 162
Query: 149 TFDAYWDKCLQMQM-----EPA---SIL--PPWRLVQAAGTIDGCSIEDLGLEDE--SEK 196
F W + Q PA SIL P + G+ + +D+ + ++
Sbjct: 163 PFSRKWREVAAKQAILPLGVPAPLGSILSEPKPLFFKNIGSTYLAASKDIASSKKGFNQT 222
Query: 197 SSNALLG-RGWSPGWSNADKVLTEFVEQHLLRYYKNRQKLGGNSTSLLSPYLHFGELSVR 255
+ N L+ W+ G A ++L +F++Q + Y ++R + TS++SPYL G LS R
Sbjct: 223 APNPLISSEQWAAGEGQAKRLLNQFIQQKVQDYKQDRDFPAIDGTSVISPYLAIGVLSPR 282
Query: 256 KVFQCLWMKQILWAKEENFEGKESVTFFLRAMGLREYSRYLCFNFP-FTHERPLLSNLKY 314
+ L + ++ G+ +L + RE+ R+L FP + +
Sbjct: 283 QCVAALLQRFPEVIVDDTSPGRT----WLNELIWREFYRHLLVAFPDLSKGNNFNRQADH 338
Query: 315 FPWHADLGNFKAWRQGRTGYPLVDAGMRELWATGWIHNRIRVIVSSFAVKVLLLPWRWGM 374
W + F AW +G+TGYP+VDA MR+L TGW+HNR+R++V+SF K LL+ WRWG
Sbjct: 339 VLWRNNQSEFLAWCEGKTGYPIVDAAMRQLNQTGWMHNRLRMVVASFLTKHLLIDWRWGE 398
Query: 375 KYFWDTLLDADLECDILGWQYISGSLPDGHELERLDSPEIQGSKFDPEGEYVRQWLPELA 434
+YF L+D DL + GWQ+ +G D R+ +P Q KFDP+G ++R++LPELA
Sbjct: 399 RYFRQHLIDGDLAANNGGWQWSAGCGCDAQPYFRIFNPMSQSEKFDPDGRFIRKYLPELA 458
Query: 435 RMPTEWIHHP-WDAPPNVLKAAGVELGLNYPKPIIDLDLGRER 476
+H P P++ +A +YP I++ + R R
Sbjct: 459 SWGVTRLHQPNQQKMPSLFEAPLFASQADYPNAIVEHNAARAR 501
>TIGR_CMR|CPS_1380 [details] [associations]
symbol:CPS_1380 "deoxyribodipyrimidine photolyase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147
PROSITE:PS00394 PROSITE:PS00691 InterPro:IPR006050 Pfam:PF00875
GO:GO:0006281 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
SUPFAM:SSF52425 SUPFAM:SSF48173 HOGENOM:HOG000245621 OMA:GDLANNQ
KO:K01669 GO:GO:0003904 RefSeq:YP_268123.1
ProteinModelPortal:Q485Z2 STRING:Q485Z2 GeneID:3520518
KEGG:cps:CPS_1380 PATRIC:21465975 ProtClustDB:CLSK715243
BioCyc:CPSY167879:GI48-1461-MONOMER Uniprot:Q485Z2
Length = 470
Score = 427 (155.4 bits), Expect = 8.1e-40, P = 8.1e-40
Identities = 134/455 (29%), Positives = 211/455 (46%)
Query: 7 IVWFRRDLRIEDNPALA------AAARDGSVFP---VYTWCPKEEGQFYPGRVSRWWLKQ 57
++W R DLR DNPAL A ++ S P ++ C ++ Q + ++K+
Sbjct: 2 LLWLRNDLRTHDNPALHYFLSRNALSQHDSAVPAKAIFFICEQQWQQHDWSPIKIDFIKR 61
Query: 58 SLSYLGQSLKSLGAELVLFKTESTLA--ALLECISAI-KATKVVFNHLYDPVSLVRDHSI 114
L + L L EL L + ++ L + T+VV N + RD ++
Sbjct: 62 HAHALVKELALLNIELELIELDNFTQQKTYLHSYCQLHNITEVVANSEVEFNEQQRDKAL 121
Query: 115 KEKLVELGISVQSYNGDLLYEPWEIYDERG---HAFTTFDAYWDKCLQMQMEPASILPPW 171
+L GI + D++ ++ ++ G FT F W +Q L
Sbjct: 122 YLELKASGIPLTLLEADVIVPKGKVLNQSGIMYKVFTPFKRAW--LTYIQQGGFEYLGKV 179
Query: 172 RLVQAAGTIDGCSIEDLGLEDESEKSSNALLGRGWSPGWSNADKVLTEFVEQHLLRYYKN 231
+ +A ++ ++ ED+ SS W ++L +F +Q + Y N
Sbjct: 180 SVKSSA--VNKADNQE---EDQGSISST------WPLATVFEQQILPKFYQQKISTYKLN 228
Query: 232 RQKLGGNSTSLLSPYLHFGELSVRKVFQCLWMKQILWAKEENFEGKESVTF-FLRAMGLR 290
R TS +SPYL G +S R V + L K + +S F +L + R
Sbjct: 229 RDIPSIKGTSGISPYLAAGVISPRFVLRLLLNKH-----PDLLVASDSEEFSWLNEIIWR 283
Query: 291 EYSRYLCFNFP-FTHERPLLSNLKYFPWHADLGNFKAWRQGRTGYPLVDAGMRELWATGW 349
E+ R+L F+ + N + WH D F AW QGRTGYPLVDA MR+L TGW
Sbjct: 284 EFYRHLLFHEQRLCKHQCYKENYQEMLWHNDAALFDAWCQGRTGYPLVDAAMRQLNQTGW 343
Query: 350 IHNRIRVIVSSFAVKVLLLPWRWGMKYFWDTLLDADLECDILGWQYISGSLPDGHELERL 409
+HNR+R++V+SF K LL+ WR G KYF L+D DL + GWQ+ + + D R+
Sbjct: 344 MHNRLRMVVASFLTKHLLIDWRLGEKYFMQHLIDGDLASNNGGWQWAASTGCDAQPYFRI 403
Query: 410 DSPEIQGSKFDPEGEYVRQWLPELARMPTEWIHHP 444
+P Q +FDP+G ++R+++PEL + + IH P
Sbjct: 404 FNPIRQSERFDPKGVFIRKYIPELNNISDKAIHFP 438
>ZFIN|ZDB-GENE-010426-6 [details] [associations]
symbol:cry3 "cryptochrome 3" species:7955 "Danio
rerio" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0009266 "response
to temperature stimulus" evidence=IDA] [GO:0009416 "response to
light stimulus" evidence=IDA] InterPro:IPR005101 Pfam:PF03441
InterPro:IPR006050 Pfam:PF00875 ZFIN:ZDB-GENE-010426-6
GO:GO:0045892 GO:GO:0006281 GO:GO:0005667 GO:GO:0009416
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0009266 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 HOVERGEN:HBG053470 EMBL:AB042252
IPI:IPI00508328 UniGene:Dr.130308 ProteinModelPortal:Q9I913
STRING:Q9I913 InParanoid:Q9I913 ArrayExpress:Q9I913 Uniprot:Q9I913
Length = 598
Score = 432 (157.1 bits), Expect = 2.6e-39, P = 2.6e-39
Identities = 140/481 (29%), Positives = 223/481 (46%)
Query: 6 TIVWFRRDLRIEDNPALAAAARDG-SVFPVYTWCPKEEGQFYPGRVSRW-WLKQSLSYLG 63
++ WFR+ LR+ DNPAL A +V VY P G G V+RW +L +SL L
Sbjct: 5 SVHWFRKGLRLHDNPALQEALNGADTVRCVYILDPWFAGSANVG-VNRWRFLLESLEDLD 63
Query: 64 QSLKSLGAELVLFKTESTLAALLECISAIKATKVVFNHLYDPVSLVRDHSIKEKLVELGI 123
SL+ L + L + + + T T++ F + +P RD +I + E G+
Sbjct: 64 TSLRKLNSRLSVVRGQPT-DVFPRLFKEWNVTRLTFEYDSEPYGKERDAAIIKMAQEYGV 122
Query: 124 SVQSYNGDLLYEPWEIYDERGHA----FTTFDAYWDKCLQMQMEPASILPPWRLVQAAGT 179
N LY P I + H+ F F A ++ L++ +P + ++ +
Sbjct: 123 ETVVRNSHTLYNPDRIIEMNNHSPPLTFKRFQAIVNR-LELPRKPLPTITQEQMARCRTQ 181
Query: 180 IDGCSIEDLG---LEDESEKSSNALLGRGWSPGWSNADKVLTEFVEQHLLRYYKNRQKLG 236
I E G LE+ ++ L W G + A + L + +++ R ++
Sbjct: 182 ISDNHDEHYGVPSLEELGFRTQGDSL-HVWKGGETEALERLNKHLDRKAWVANFERPRIS 240
Query: 237 GNST----SLLSPYLHFGELSVRKVFQCLWMKQILWAKEENFEGKESVTFFLRAMGLREY 292
G S + LSPYL FG LS R + L + L+ K ++ F + + RE+
Sbjct: 241 GQSLFPSPTGLSPYLRFGCLSCRVFYYNL---RDLFMKLRR-RSSPPLSLFGQLLW-REF 295
Query: 293 SRYLCFNFP-FTHER--PLLSNLKYFPWHADLGNFKAWRQGRTGYPLVDAGMRELWATGW 349
N P F H P+ + PW + W +GRTG+P +DA M +L GW
Sbjct: 296 FYTAGTNNPNFDHMEGNPICVQI---PWDHNPEALAKWAEGRTGFPWIDAIMTQLRQEGW 352
Query: 350 IHNRIRVIVSSFAVKV-LLLPWRWGMKYFWDTLLDADLECDILGWQYISGSLPDGHELER 408
IH+ R V+ F + L + W GMK F + LLDAD + W ++S S +
Sbjct: 353 IHHLARHAVACFLTRGDLWISWESGMKVFEELLLDADWSVNAGSWMWLSCSA-FFQQFFH 411
Query: 409 LDSPEIQGSKFDPEGEYVRQWLPELARMPTEWIHHPWDAPPNVLKAAGVELGLNYPKPII 468
P G + DP G+Y+R+++P+L P +I+ PW+AP +V KAA +G++YPKP+I
Sbjct: 412 CYCPVGFGRRTDPSGDYIRRYIPKLKDYPNRYIYEPWNAPESVQKAANCIVGVDYPKPMI 471
Query: 469 D 469
+
Sbjct: 472 N 472
>UNIPROTKB|Q49AN0 [details] [associations]
symbol:CRY2 "Cryptochrome-2" species:9606 "Homo sapiens"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0018298
"protein-chromophore linkage" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISS;IDA]
[GO:0003904 "deoxyribodipyrimidine photo-lyase activity"
evidence=IDA] [GO:0003914 "DNA (6-4) photolyase activity"
evidence=IDA] [GO:0000719 "photoreactive repair" evidence=IDA]
[GO:0003684 "damaged DNA binding" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IDA] [GO:0003697 "single-stranded DNA binding"
evidence=IDA] [GO:0009785 "blue light signaling pathway"
evidence=NAS] [GO:0009882 "blue light photoreceptor activity"
evidence=NAS] [GO:0019902 "phosphatase binding" evidence=IPI]
[GO:0032515 "negative regulation of phosphoprotein phosphatase
activity" evidence=IDA] [GO:0007623 "circadian rhythm"
evidence=ISS] [GO:0005576 "extracellular region" evidence=IDA]
[GO:2000118 "regulation of sodium-dependent phosphate transport"
evidence=IDA] [GO:0000988 "protein binding transcription factor
activity" evidence=IDA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR005101
Pfam:PF03441 PROSITE:PS00394 InterPro:IPR006050 Pfam:PF00875
GO:GO:0005739 GO:GO:0005634 GO:GO:0005737 GO:GO:0005576
GO:GO:0000166 GO:GO:0003684 GO:GO:0007623 GO:GO:0006281
GO:GO:0006351 GO:GO:0042752 GO:GO:0000122 GO:GO:0006606
GO:GO:0003697 GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729
Reactome:REACT_24941 EMBL:AC068385 eggNOG:COG0415
HOGENOM:HOG000245622 KO:K02295 GO:GO:0009882 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 HOVERGEN:HBG053470
GO:GO:0000988 CTD:1408 EMBL:AK294904 EMBL:BC035161 EMBL:BC041814
EMBL:AB014558 IPI:IPI00216898 IPI:IPI00895886 RefSeq:NP_001120929.1
RefSeq:NP_066940.2 UniGene:Hs.532491 ProteinModelPortal:Q49AN0
SMR:Q49AN0 IntAct:Q49AN0 STRING:Q49AN0 DMDM:118572252 PaxDb:Q49AN0
PRIDE:Q49AN0 DNASU:1408 Ensembl:ENST00000417225 GeneID:1408
KEGG:hsa:1408 UCSC:uc009ykw.3 UCSC:uc010rgo.2 GeneCards:GC11P045868
H-InvDB:HIX0201587 HGNC:HGNC:2385 HPA:HPA037577 MIM:603732
neXtProt:NX_Q49AN0 PharmGKB:PA26905 InParanoid:Q49AN0
OrthoDB:EOG4VT5WZ PhylomeDB:Q49AN0 GenomeRNAi:1408 NextBio:5757
ArrayExpress:Q49AN0 Bgee:Q49AN0 CleanEx:HS_CRY2
Genevestigator:Q49AN0 GermOnline:ENSG00000121671 GO:GO:0032515
GO:GO:2000118 Uniprot:Q49AN0
Length = 593
Score = 430 (156.4 bits), Expect = 3.7e-39, P = 3.7e-39
Identities = 135/483 (27%), Positives = 221/483 (45%)
Query: 6 TIVWFRRDLRIEDNPALAAAARDGS-VFPVYTWCPKEEGQFYPGRVSRW-WLKQSLSYLG 63
++ WFR+ LR+ DNPAL AA R V VY P G ++RW +L QSL L
Sbjct: 24 SVHWFRKGLRLHDNPALLAAVRGARCVRCVYILDPWFAASSSVG-INRWRFLLQSLEDLD 82
Query: 64 QSLKSLGAELVLFKTESTLAALLECISAIKATKVVFNHLYDPVSLVRDHSIKEKLVELGI 123
SL+ L + L + + + T++ F + +P RD +I + E G+
Sbjct: 83 TSLRKLNSRLFVVRGQPA-DVFPRLFKEWGVTRLTFEYDSEPFGKERDAAIMKMAKEAGV 141
Query: 124 SVQSYNGDLLYEPWEIYDERGH----AFTTFDAYWDKCLQMQMEPASILPPWRLVQAAGT 179
V + N LY+ I + G + F A + +++ +P ++ ++
Sbjct: 142 EVVTENSHTLYDLDRIIELNGQKPPLTYKRFQAIISR-MELPKKPVGLVTSQQMESCRAE 200
Query: 180 IDGCSIEDLGLEDESEKSSNALLGRGWSPG-WSNADKVLTEFVEQHLLR--YYKNRQKLG 236
I E G+ E G P W + +++HL R + N ++
Sbjct: 201 IQENHDETYGVPSLEELGFPT---EGLGPAVWQGGETEALARLDKHLERKAWVANYERPR 257
Query: 237 GNSTSLL------SPYLHFGELSVRKVFQCLWMKQILWAKEENFEGKESVTFFLRAMGLR 290
N+ SLL SPYL FG LS R + LW L+ K + ++ F + + R
Sbjct: 258 MNANSLLASPTGLSPYLRFGCLSCRLFYYRLWD---LYKKVKR-NSTPPLSLFGQLLW-R 312
Query: 291 EYSRYLCFNFP-FTHER--PLLSNLKYFPWHADLGNFKAWRQGRTGYPLVDAGMRELWAT 347
E+ N P F P+ + PW + W +G+TG+P +DA M +L
Sbjct: 313 EFFYTAATNNPRFDRMEGNPICIQI---PWDRNPEALAKWAEGKTGFPWIDAIMTQLRQE 369
Query: 348 GWIHNRIRVIVSSFAVKV-LLLPWRWGMKYFWDTLLDADLECDILGWQYISGSLPDGHEL 406
GWIH+ R V+ F + L + W G++ F + LLDAD + W ++S S +
Sbjct: 370 GWIHHLARHAVACFLTRGDLWVSWESGVRVFDELLLDADFSVNAGSWMWLSCSA-FFQQF 428
Query: 407 ERLDSPEIQGSKFDPEGEYVRQWLPELARMPTEWIHHPWDAPPNVLKAAGVELGLNYPKP 466
P G + DP G+Y+R++LP+L P+ +I+ PW+AP ++ KAA +G++YP+P
Sbjct: 429 FHCYCPVGFGRRTDPSGDYIRRYLPKLKAFPSRYIYEPWNAPESIQKAAKCIIGVDYPRP 488
Query: 467 IID 469
I++
Sbjct: 489 IVN 491
>UNIPROTKB|Q8QG60 [details] [associations]
symbol:CRY2 "Cryptochrome-2" species:9031 "Gallus gallus"
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009881 "photoreceptor activity"
evidence=IEA] [GO:0018298 "protein-chromophore linkage"
evidence=IEA] [GO:0048511 "rhythmic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISS] InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 GO:GO:0005634 GO:GO:0005737
GO:GO:0006355 GO:GO:0000166 GO:GO:0006281 GO:GO:0006351
GO:GO:0048511 GO:GO:0009881 GO:GO:0018298 Gene3D:3.40.50.620
InterPro:IPR014729 eggNOG:COG0415 HOGENOM:HOG000245622 KO:K02295
GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645
HOVERGEN:HBG053470 GeneTree:ENSGT00500000044813 EMBL:AY034433
EMBL:AY046568 EMBL:AF251344 IPI:IPI00572393 RefSeq:NP_989575.1
UniGene:Gga.20033 HSSP:P05327 ProteinModelPortal:Q8QG60
STRING:Q8QG60 Ensembl:ENSGALT00000038344 GeneID:374092
KEGG:gga:374092 CTD:1408 InParanoid:Q8QG60 NextBio:20813611
Uniprot:Q8QG60
Length = 582
Score = 426 (155.0 bits), Expect = 4.2e-39, P = 4.2e-39
Identities = 136/481 (28%), Positives = 222/481 (46%)
Query: 5 RTIVWFRRDLRIEDNPALAAAARDG-SVFPVYTWCPKEEGQFYPGRVSRW-WLKQSLSYL 62
R++ WFRR LR+ DNPAL AA R S+ +Y P G ++RW +L QSL L
Sbjct: 13 RSVHWFRRGLRLHDNPALQAALRGAASLRCIYILDPWFAASSAVG-INRWRFLLQSLEDL 71
Query: 63 GQSLKSLGAELVLFKTESTLAALLECISAIKATKVVFNHLYDPVSLVRDHSIKEKLVELG 122
SL+ L + L + + + T T++ F + +P RD +I + E G
Sbjct: 72 DNSLRKLNSRLFVVRGQPT-DVFPRLFKEWGVTRLAFEYDSEPFGKERDAAIIKLAKEAG 130
Query: 123 ISVQSYNGDLLYEPWEIYDERGH----AFTTFDAYWDKCLQMQMEPASILPPWRLVQAAG 178
+ V N LY I + G+ + F A + +++ +P S + ++
Sbjct: 131 VEVVIENSHTLYNLDRIIELNGNKPPLTYKRFQAIISR-MELPKKPVSSIVSQQMETCKV 189
Query: 179 TIDGCSIEDLGLEDESEKS--SNALLGRGWSPGWSNADKVLTEFVEQHLLRYYKNRQKLG 236
I + G+ E ++ L W G + A L + +E+ R ++
Sbjct: 190 DIQENHDDVYGVPSLEELGFPTDGLAPAVWQGGETEALARLDKHLERKAWVANYERPRMN 249
Query: 237 GNSTSL----LSPYLHFGELSVRKVFQCLWMKQILWAKEENFEGKESVTFFLRAMGLREY 292
NS LSPYL FG LS R + LW L+ K + ++ + + + RE+
Sbjct: 250 ANSLLASPTGLSPYLRFGCLSCRLFYYRLWE---LYKKVKR-NSTPPLSLYGQLLW-REF 304
Query: 293 SRYLCFNFP-FTHER--PLLSNLKYFPWHADLGNFKAWRQGRTGYPLVDAGMRELWATGW 349
N P F P+ + PW + W +G+TG+P +DA M +L GW
Sbjct: 305 FYTAATNNPKFDRMEGNPICIQI---PWDKNPEALAKWAEGKTGFPWIDAIMTQLRQEGW 361
Query: 350 IHNRIRVIVSSFAVKV-LLLPWRWGMKYFWDTLLDADLECDILGWQYISGSLPDGHELER 408
IH+ R V+ F + L + W G++ F + LLDAD + W ++S S +
Sbjct: 362 IHHLARHAVACFLTRGDLWISWESGVRVFDELLLDADFSVNAGSWMWLSCSA-FFQQFFH 420
Query: 409 LDSPEIQGSKFDPEGEYVRQWLPELARMPTEWIHHPWDAPPNVLKAAGVELGLNYPKPII 468
P G + DP G+YV+++LP+L P+ +I+ PW+AP +V KAA +G++YPKP++
Sbjct: 421 CYCPVGFGRRTDPSGDYVKRYLPKLKGFPSRYIYEPWNAPESVQKAAKCIIGVDYPKPMV 480
Query: 469 D 469
+
Sbjct: 481 N 481
>MGI|MGI:1270859 [details] [associations]
symbol:Cry2 "cryptochrome 2 (photolyase-like)" species:10090
"Mus musculus" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0000988 "protein binding
transcription factor activity" evidence=ISO] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003684 "damaged DNA binding"
evidence=ISO] [GO:0003697 "single-stranded DNA binding"
evidence=ISO] [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006606 "protein import into
nucleus" evidence=IPI] [GO:0007623 "circadian rhythm" evidence=IMP]
[GO:0009881 "photoreceptor activity" evidence=IEA] [GO:0016829
"lyase activity" evidence=IEA] [GO:0018298 "protein-chromophore
linkage" evidence=IEA] [GO:0019902 "phosphatase binding"
evidence=ISO] [GO:0032515 "negative regulation of phosphoprotein
phosphatase activity" evidence=ISO] [GO:0042752 "regulation of
circadian rhythm" evidence=IMP] [GO:0048511 "rhythmic process"
evidence=IEA] [GO:0050896 "response to stimulus" evidence=IEA]
InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394 InterPro:IPR006050
Pfam:PF00875 MGI:MGI:1270859 GO:GO:0005829 GO:GO:0005739
GO:GO:0005654 GO:GO:0000166 GO:GO:0003684 GO:GO:0007623
GO:GO:0006281 GO:GO:0006351 GO:GO:0042752 GO:GO:0000122
GO:GO:0006606 GO:GO:0003697 GO:GO:0009881 GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 Reactome:REACT_109335
Reactome:REACT_24972 eggNOG:COG0415 HOGENOM:HOG000245622 KO:K02295
GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645
HOVERGEN:HBG053470 GeneTree:ENSGT00500000044813 GO:GO:0000988
CTD:1408 OrthoDB:EOG4VT5WZ EMBL:AF156987 EMBL:AK041696
EMBL:AK133781 EMBL:BC054794 EMBL:BC066799 EMBL:AK172994
EMBL:AB003433 IPI:IPI00128234 RefSeq:NP_001106804.1
RefSeq:NP_034093.1 UniGene:Mm.254181 ProteinModelPortal:Q9R194
SMR:Q9R194 DIP:DIP-38517N IntAct:Q9R194 STRING:Q9R194
PhosphoSite:Q9R194 PRIDE:Q9R194 Ensembl:ENSMUST00000090559
Ensembl:ENSMUST00000111278 GeneID:12953 KEGG:mmu:12953
InParanoid:Q9R194 OMA:LCKHLLI NextBio:282666 Bgee:Q9R194
CleanEx:MM_CRY2 Genevestigator:Q9R194 GermOnline:ENSMUSG00000068742
Uniprot:Q9R194
Length = 592
Score = 429 (156.1 bits), Expect = 4.8e-39, P = 4.8e-39
Identities = 137/486 (28%), Positives = 222/486 (45%)
Query: 3 GNRTIVWFRRDLRIEDNPALAAAARDGS-VFPVYTWCPKEEGQFYPGRVSRW-WLKQSLS 60
G ++ WFR+ LR+ DNPAL AA R V VY P G ++RW +L QSL
Sbjct: 20 GASSVHWFRKGLRLHDNPALLAAVRGARCVRCVYILDPWFAASSSVG-INRWRFLLQSLE 78
Query: 61 YLGQSLKSLGAELVLFKTESTLAALLECISAIKATKVVFNHLYDPVSLVRDHSIKEKLVE 120
L SL+ L + L + + + T++ F + +P RD +I + E
Sbjct: 79 DLDTSLRKLNSRLFVVRGQPA-DVFPRLFKEWGVTRLTFEYDSEPFGKERDAAIMKMAKE 137
Query: 121 LGISVQSYNGDLLYEPWEIYDERGH----AFTTFDAYWDKCLQMQMEPASILPPWRLVQA 176
G+ V + N LY+ I + G + F A + +++ +PA + ++
Sbjct: 138 AGVEVVTENSHTLYDLDRIIELNGQKPPLTYKRFQALISR-MELPKKPAVAVSSQQMESC 196
Query: 177 AGTIDGCSIEDLGLEDESEKSSNALLGRGWSPG-WSNADKVLTEFVEQHLLR--YYKNRQ 233
I + G+ E G P W + +++HL R + N +
Sbjct: 197 RAEIQENHDDTYGVPSLEELGFPT---EGLGPAVWQGGETEALARLDKHLERKAWVANYE 253
Query: 234 KLGGNSTSLL------SPYLHFGELSVRKVFQCLWMKQILWAKEENFEGKESVTFFLRAM 287
+ N+ SLL SPYL FG LS R + LW L+ K + ++ F + +
Sbjct: 254 RPRMNANSLLASPTGLSPYLRFGCLSCRLFYYRLWD---LYKKVKR-NSTPPLSLFGQLL 309
Query: 288 GLREYSRYLCFNFP-FTHER--PLLSNLKYFPWHADLGNFKAWRQGRTGYPLVDAGMREL 344
RE+ N P F P+ + PW + W +G+TG+P +DA M +L
Sbjct: 310 W-REFFYTAATNNPRFDRMEGNPICIQI---PWDRNPEALAKWAEGKTGFPWIDAIMTQL 365
Query: 345 WATGWIHNRIRVIVSSFAVKV-LLLPWRWGMKYFWDTLLDADLECDILGWQYISGSLPDG 403
GWIH+ R V+ F + L + W G++ F + LLDAD + W ++S S
Sbjct: 366 RQEGWIHHLARHAVACFLTRGDLWVSWESGVRVFDELLLDADFSVNAGSWMWLSCSA-FF 424
Query: 404 HELERLDSPEIQGSKFDPEGEYVRQWLPELARMPTEWIHHPWDAPPNVLKAAGVELGLNY 463
+ P G + DP G+Y+R++LP+L P+ +I+ PW+AP +V KAA +G++Y
Sbjct: 425 QQFFHCYCPVGFGRRTDPSGDYIRRYLPKLKGFPSRYIYEPWNAPESVQKAAKCIIGVDY 484
Query: 464 PKPIID 469
P+PI++
Sbjct: 485 PRPIVN 490
>UNIPROTKB|B4DZD6 [details] [associations]
symbol:CRY2 "Cryptochrome-2" species:9606 "Homo sapiens"
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0006606 "protein import into nucleus"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IEA]
[GO:0042752 "regulation of circadian rhythm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050
Pfam:PF00875 GO:GO:0005739 GO:GO:0005634 GO:GO:0005737
GO:GO:0007623 GO:GO:0006281 GO:GO:0042752 GO:GO:0006606
Gene3D:3.40.50.620 InterPro:IPR014729 EMBL:AC068385
HOGENOM:HOG000245622 KO:K02295 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 HOVERGEN:HBG053470 CTD:1408 IPI:IPI00216898
RefSeq:NP_066940.2 UniGene:Hs.532491 DNASU:1408 GeneID:1408
KEGG:hsa:1408 HGNC:HGNC:2385 PharmGKB:PA26905 GenomeRNAi:1408
NextBio:5757 OMA:LCKHLLI EMBL:AK302865 ProteinModelPortal:B4DZD6
SMR:B4DZD6 STRING:B4DZD6 PRIDE:B4DZD6 Ensembl:ENST00000443527
UCSC:uc010rgn.2 ArrayExpress:B4DZD6 Bgee:B4DZD6 Uniprot:B4DZD6
Length = 614
Score = 430 (156.4 bits), Expect = 1.1e-38, P = 1.1e-38
Identities = 135/483 (27%), Positives = 221/483 (45%)
Query: 6 TIVWFRRDLRIEDNPALAAAARDGS-VFPVYTWCPKEEGQFYPGRVSRW-WLKQSLSYLG 63
++ WFR+ LR+ DNPAL AA R V VY P G ++RW +L QSL L
Sbjct: 45 SVHWFRKGLRLHDNPALLAAVRGARCVRCVYILDPWFAASSSVG-INRWRFLLQSLEDLD 103
Query: 64 QSLKSLGAELVLFKTESTLAALLECISAIKATKVVFNHLYDPVSLVRDHSIKEKLVELGI 123
SL+ L + L + + + T++ F + +P RD +I + E G+
Sbjct: 104 TSLRKLNSRLFVVRGQPA-DVFPRLFKEWGVTRLTFEYDSEPFGKERDAAIMKMAKEAGV 162
Query: 124 SVQSYNGDLLYEPWEIYDERGH----AFTTFDAYWDKCLQMQMEPASILPPWRLVQAAGT 179
V + N LY+ I + G + F A + +++ +P ++ ++
Sbjct: 163 EVVTENSHTLYDLDRIIELNGQKPPLTYKRFQAIISR-MELPKKPVGLVTSQQMESCRAE 221
Query: 180 IDGCSIEDLGLEDESEKSSNALLGRGWSPG-WSNADKVLTEFVEQHLLR--YYKNRQKLG 236
I E G+ E G P W + +++HL R + N ++
Sbjct: 222 IQENHDETYGVPSLEELGFPT---EGLGPAVWQGGETEALARLDKHLERKAWVANYERPR 278
Query: 237 GNSTSLL------SPYLHFGELSVRKVFQCLWMKQILWAKEENFEGKESVTFFLRAMGLR 290
N+ SLL SPYL FG LS R + LW L+ K + ++ F + + R
Sbjct: 279 MNANSLLASPTGLSPYLRFGCLSCRLFYYRLWD---LYKKVKR-NSTPPLSLFGQLLW-R 333
Query: 291 EYSRYLCFNFP-FTHER--PLLSNLKYFPWHADLGNFKAWRQGRTGYPLVDAGMRELWAT 347
E+ N P F P+ + PW + W +G+TG+P +DA M +L
Sbjct: 334 EFFYTAATNNPRFDRMEGNPICIQI---PWDRNPEALAKWAEGKTGFPWIDAIMTQLRQE 390
Query: 348 GWIHNRIRVIVSSFAVKV-LLLPWRWGMKYFWDTLLDADLECDILGWQYISGSLPDGHEL 406
GWIH+ R V+ F + L + W G++ F + LLDAD + W ++S S +
Sbjct: 391 GWIHHLARHAVACFLTRGDLWVSWESGVRVFDELLLDADFSVNAGSWMWLSCSA-FFQQF 449
Query: 407 ERLDSPEIQGSKFDPEGEYVRQWLPELARMPTEWIHHPWDAPPNVLKAAGVELGLNYPKP 466
P G + DP G+Y+R++LP+L P+ +I+ PW+AP ++ KAA +G++YP+P
Sbjct: 450 FHCYCPVGFGRRTDPSGDYIRRYLPKLKAFPSRYIYEPWNAPESIQKAAKCIIGVDYPRP 509
Query: 467 IID 469
I++
Sbjct: 510 IVN 512
>RGD|620935 [details] [associations]
symbol:Cry2 "cryptochrome 2 (photolyase-like)" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000988 "protein
binding transcription factor activity" evidence=IEA;ISO]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003684 "damaged DNA
binding" evidence=IEA;ISO] [GO:0003697 "single-stranded DNA
binding" evidence=IEA;ISO] [GO:0003913 "DNA photolyase activity"
evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=IEA;ISO;ISS] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006606 "protein
import into nucleus" evidence=IEA;ISO] [GO:0007623 "circadian
rhythm" evidence=IEA;IEP;ISO] [GO:0009881 "photoreceptor activity"
evidence=IEA] [GO:0018298 "protein-chromophore linkage"
evidence=IEA] [GO:0019902 "phosphatase binding" evidence=ISO]
[GO:0032515 "negative regulation of phosphoprotein phosphatase
activity" evidence=ISO] [GO:0042752 "regulation of circadian
rhythm" evidence=IEA;ISO] [GO:2000118 "regulation of
sodium-dependent phosphate transport" evidence=IEA;ISO] [GO:0000719
"photoreactive repair" evidence=ISO] [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=ISO]
[GO:0003914 "DNA (6-4) photolyase activity" evidence=ISO]
InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394 InterPro:IPR006050
Pfam:PF00875 RGD:620935 GO:GO:0005739 GO:GO:0005634 GO:GO:0000166
GO:GO:0003684 GO:GO:0007623 GO:GO:0006281 GO:GO:0006351
GO:GO:0042752 GO:GO:0000122 GO:GO:0006606 GO:GO:0003697
GO:GO:0009881 GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729
eggNOG:COG0415 HOGENOM:HOG000245622 KO:K02295 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 HOVERGEN:HBG053470
GO:GO:0000988 CTD:1408 OrthoDB:EOG4VT5WZ EMBL:AY033877
IPI:IPI00203659 RefSeq:NP_596896.1 UniGene:Rn.21150 HSSP:Q43125
ProteinModelPortal:Q923I8 STRING:Q923I8 PRIDE:Q923I8 GeneID:170917
KEGG:rno:170917 UCSC:RGD:620935 InParanoid:Q923I8 NextBio:621399
ArrayExpress:Q923I8 Genevestigator:Q923I8
GermOnline:ENSRNOG00000007478 Uniprot:Q923I8
Length = 594
Score = 427 (155.4 bits), Expect = 1.2e-38, P = 1.2e-38
Identities = 136/486 (27%), Positives = 220/486 (45%)
Query: 3 GNRTIVWFRRDLRIEDNPALAAAARDGS-VFPVYTWCPKEEGQFYPGRVSRW-WLKQSLS 60
G ++ WFR+ LR+ DNPAL AA R V VY P G ++RW +L QSL
Sbjct: 20 GASSVHWFRKGLRLHDNPALLAAVRGARCVRCVYILDPWFAASSSVG-INRWRFLLQSLE 78
Query: 61 YLGQSLKSLGAELVLFKTESTLAALLECISAIKATKVVFNHLYDPVSLVRDHSIKEKLVE 120
L SL+ L + L + + + T++ F + +P RD +I + E
Sbjct: 79 DLDTSLRKLNSRLFVVRGQPA-DVFPRLFKEWGVTRLTFEYDSEPFGKERDAAIMKMAKE 137
Query: 121 LGISVQSYNGDLLYEPWEIYDERGH----AFTTFDAYWDKCLQMQMEPASILPPWRLVQA 176
G+ V + N LY+ I + G + F A + +++ +P + +
Sbjct: 138 AGVEVVTENSHTLYDLDRIIELNGQKPPLTYKRFQALISR-MELPKKPVGAVSSQHMENC 196
Query: 177 AGTIDGCSIEDLGLEDESEKSSNALLGRGWSPG-WSNADKVLTEFVEQHLLR--YYKNRQ 233
I + G+ E G P W + +++HL R + N +
Sbjct: 197 RAEIQENHDDTYGVPSLEELGFPT---EGLGPAVWQGGETEALVRLDKHLERKAWVANYE 253
Query: 234 KLGGNSTSLL------SPYLHFGELSVRKVFQCLWMKQILWAKEENFEGKESVTFFLRAM 287
+ N+ SLL SPYL FG LS R + LW L+ K + ++ F + +
Sbjct: 254 RPRMNANSLLASPTGLSPYLRFGCLSCRLFYYRLWD---LYRKVKR-NSTPPLSLFGQLL 309
Query: 288 GLREYSRYLCFNFP-FTHER--PLLSNLKYFPWHADLGNFKAWRQGRTGYPLVDAGMREL 344
RE+ N P F P+ + PW + W +G+TG+P +DA M +L
Sbjct: 310 W-REFFYTAATNNPRFDRMEGNPICIQI---PWDRNPEALAKWAEGKTGFPWIDAIMTQL 365
Query: 345 WATGWIHNRIRVIVSSFAVKV-LLLPWRWGMKYFWDTLLDADLECDILGWQYISGSLPDG 403
GWIH+ R V+ F + L + W G++ F + LLDAD + W ++S S
Sbjct: 366 RQEGWIHHLARHAVACFLTRGDLWVSWESGVRVFDELLLDADFSVNAGSWMWLSCSA-FF 424
Query: 404 HELERLDSPEIQGSKFDPEGEYVRQWLPELARMPTEWIHHPWDAPPNVLKAAGVELGLNY 463
+ P G + DP G+Y+R++LP+L P+ +I+ PW+AP +V KAA +G++Y
Sbjct: 425 QQFFHCYCPVGFGRRTDPSGDYIRRYLPKLKGFPSRYIYEPWNAPESVQKAANCIIGVDY 484
Query: 464 PKPIID 469
P+PI++
Sbjct: 485 PRPIVN 490
>UNIPROTKB|Q923I8 [details] [associations]
symbol:Cry2 "Cryptochrome-2" species:10116 "Rattus
norvegicus" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 PROSITE:PS00394 InterPro:IPR006050 Pfam:PF00875
RGD:620935 GO:GO:0005739 GO:GO:0005634 GO:GO:0000166 GO:GO:0003684
GO:GO:0007623 GO:GO:0006281 GO:GO:0006351 GO:GO:0042752
GO:GO:0000122 GO:GO:0006606 GO:GO:0003697 GO:GO:0009881
GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
HOGENOM:HOG000245622 KO:K02295 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 PROSITE:PS51645 HOVERGEN:HBG053470 GO:GO:0000988
CTD:1408 OrthoDB:EOG4VT5WZ EMBL:AY033877 IPI:IPI00203659
RefSeq:NP_596896.1 UniGene:Rn.21150 HSSP:Q43125
ProteinModelPortal:Q923I8 STRING:Q923I8 PRIDE:Q923I8 GeneID:170917
KEGG:rno:170917 UCSC:RGD:620935 InParanoid:Q923I8 NextBio:621399
ArrayExpress:Q923I8 Genevestigator:Q923I8
GermOnline:ENSRNOG00000007478 Uniprot:Q923I8
Length = 594
Score = 427 (155.4 bits), Expect = 1.2e-38, P = 1.2e-38
Identities = 136/486 (27%), Positives = 220/486 (45%)
Query: 3 GNRTIVWFRRDLRIEDNPALAAAARDGS-VFPVYTWCPKEEGQFYPGRVSRW-WLKQSLS 60
G ++ WFR+ LR+ DNPAL AA R V VY P G ++RW +L QSL
Sbjct: 20 GASSVHWFRKGLRLHDNPALLAAVRGARCVRCVYILDPWFAASSSVG-INRWRFLLQSLE 78
Query: 61 YLGQSLKSLGAELVLFKTESTLAALLECISAIKATKVVFNHLYDPVSLVRDHSIKEKLVE 120
L SL+ L + L + + + T++ F + +P RD +I + E
Sbjct: 79 DLDTSLRKLNSRLFVVRGQPA-DVFPRLFKEWGVTRLTFEYDSEPFGKERDAAIMKMAKE 137
Query: 121 LGISVQSYNGDLLYEPWEIYDERGH----AFTTFDAYWDKCLQMQMEPASILPPWRLVQA 176
G+ V + N LY+ I + G + F A + +++ +P + +
Sbjct: 138 AGVEVVTENSHTLYDLDRIIELNGQKPPLTYKRFQALISR-MELPKKPVGAVSSQHMENC 196
Query: 177 AGTIDGCSIEDLGLEDESEKSSNALLGRGWSPG-WSNADKVLTEFVEQHLLR--YYKNRQ 233
I + G+ E G P W + +++HL R + N +
Sbjct: 197 RAEIQENHDDTYGVPSLEELGFPT---EGLGPAVWQGGETEALVRLDKHLERKAWVANYE 253
Query: 234 KLGGNSTSLL------SPYLHFGELSVRKVFQCLWMKQILWAKEENFEGKESVTFFLRAM 287
+ N+ SLL SPYL FG LS R + LW L+ K + ++ F + +
Sbjct: 254 RPRMNANSLLASPTGLSPYLRFGCLSCRLFYYRLWD---LYRKVKR-NSTPPLSLFGQLL 309
Query: 288 GLREYSRYLCFNFP-FTHER--PLLSNLKYFPWHADLGNFKAWRQGRTGYPLVDAGMREL 344
RE+ N P F P+ + PW + W +G+TG+P +DA M +L
Sbjct: 310 W-REFFYTAATNNPRFDRMEGNPICIQI---PWDRNPEALAKWAEGKTGFPWIDAIMTQL 365
Query: 345 WATGWIHNRIRVIVSSFAVKV-LLLPWRWGMKYFWDTLLDADLECDILGWQYISGSLPDG 403
GWIH+ R V+ F + L + W G++ F + LLDAD + W ++S S
Sbjct: 366 RQEGWIHHLARHAVACFLTRGDLWVSWESGVRVFDELLLDADFSVNAGSWMWLSCSA-FF 424
Query: 404 HELERLDSPEIQGSKFDPEGEYVRQWLPELARMPTEWIHHPWDAPPNVLKAAGVELGLNY 463
+ P G + DP G+Y+R++LP+L P+ +I+ PW+AP +V KAA +G++Y
Sbjct: 425 QQFFHCYCPVGFGRRTDPSGDYIRRYLPKLKGFPSRYIYEPWNAPESVQKAANCIIGVDY 484
Query: 464 PKPIID 469
P+PI++
Sbjct: 485 PRPIVN 490
>UNIPROTKB|F1SHJ9 [details] [associations]
symbol:CRY2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000118 "regulation of sodium-dependent phosphate
transport" evidence=IEA] [GO:0042752 "regulation of circadian
rhythm" evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IEA]
[GO:0006606 "protein import into nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=IEA] [GO:0003684 "damaged
DNA binding" evidence=IEA] [GO:0000988 "protein binding
transcription factor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0003913
"DNA photolyase activity" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 GO:GO:0005739
GO:GO:0005634 GO:GO:0003684 GO:GO:0007623 GO:GO:0006281
GO:GO:0042752 GO:GO:0000122 GO:GO:0006606 GO:GO:0003697
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 GeneTree:ENSGT00500000044813 GO:GO:0000988
OMA:LCKHLLI EMBL:FP101987 Ensembl:ENSSSCT00000014494 Uniprot:F1SHJ9
Length = 613
Score = 427 (155.4 bits), Expect = 2.8e-38, P = 2.8e-38
Identities = 139/487 (28%), Positives = 225/487 (46%)
Query: 3 GNRTIVWFRRDLRIEDNPALAAAARDGS-VFPVYTWCPKEEGQFYPGRVSRW-WLKQSLS 60
G ++ WFR+ LR+ DNPAL AA R V VY P G ++RW +L QSL
Sbjct: 41 GASSVHWFRKGLRLHDNPALLAAVRGAHCVRCVYILDPWFAASSSVG-INRWRFLLQSLE 99
Query: 61 YLGQSLKSLGAELVLFKTESTLAALLECISAI-KATKVVFNHLYDPVSLVRDHSIKEKLV 119
L SL+ L + L + + + A + S T++ F + +P RD +I +
Sbjct: 100 DLDTSLRKLNSRLFVVRGQP--ADVFPGYSREWGVTRLTFEYDSEPFGKERDAAIMKMAK 157
Query: 120 ELGISVQSYNGDLLYEPWEIYDERGH----AFTTFDAYWDKCLQMQMEPASILPPWRLVQ 175
E G+ V + N LY+ +I + G + F A + +++ +P + ++
Sbjct: 158 EAGVEVVTENSHTLYDLDKIIELNGQKPPLTYKRFQALISR-MELPKKPVGSVTSQQMES 216
Query: 176 AAGTIDGCSIEDLGLEDESEKSSNALLGRGWSPG-WSNADKVLTEFVEQHLLR--YYKNR 232
I E G+ E G P W + +++HL R + N
Sbjct: 217 CRAEIQENHDETYGVPSLEELGFPT---EGLGPAVWQGGETEALARLDKHLERKAWVANY 273
Query: 233 QKLGGNSTSLL------SPYLHFGELSVRKVFQCLWMKQILWAKEENFEGKESVTFFLRA 286
++ N+ SLL SPYL FG LS R + LW L+ K + ++ F +
Sbjct: 274 ERPRMNANSLLASPTGLSPYLRFGCLSCRLFYYRLWD---LYKKVKR-NSTPPLSLFGQL 329
Query: 287 MGLREYSRYLCFNFP-FTHER--PLLSNLKYFPWHADLGNFKAWRQGRTGYPLVDAGMRE 343
+ RE+ N P F P+ + PW + W +G+TG+P +DA M +
Sbjct: 330 LW-REFFYTAATNNPRFDRMEGNPICIQI---PWDRNPEALAKWAEGKTGFPWIDAIMTQ 385
Query: 344 LWATGWIHNRIRVIVSSFAVKV-LLLPWRWGMKYFWDTLLDADLECDILGWQYISGSLPD 402
L GWIH+ R V+ F + L + W G++ F + LLDAD + W ++S S
Sbjct: 386 LRQEGWIHHLARHAVACFLTRGDLWVSWESGVRVFDELLLDADFSVNAGSWMWLSCSA-F 444
Query: 403 GHELERLDSPEIQGSKFDPEGEYVRQWLPELARMPTEWIHHPWDAPPNVLKAAGVELGLN 462
+ P G + DP G+Y+R++LP+L P+ +I+ PW+AP +V KAA +G++
Sbjct: 445 FQQFFHCYCPVGFGRRTDPSGDYIRRYLPKLKGFPSRYIYEPWNAPESVQKAAKCIIGVD 504
Query: 463 YPKPIID 469
YP+PI++
Sbjct: 505 YPRPIVN 511
>UNIPROTKB|Q17DK5 [details] [associations]
symbol:cry "Cryptochrome-1" species:7159 "Aedes aegypti"
[GO:0000060 "protein import into nucleus, translocation"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005641
"nuclear envelope lumen" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0009785 "blue light signaling pathway"
evidence=ISS] [GO:0009882 "blue light photoreceptor activity"
evidence=ISS] [GO:0042752 "regulation of circadian rhythm"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0050660 "flavin adenine
dinucleotide binding" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147
PROSITE:PS00394 InterPro:IPR006050 Pfam:PF00875 GO:GO:0005737
GO:GO:0048471 GO:GO:0045892 GO:GO:0050660 GO:GO:0006281
GO:GO:0006351 GO:GO:0005641 GO:GO:0042752 GO:GO:0048511
GO:GO:0000060 GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729
EMBL:CH477293 RefSeq:XP_001648498.1 UniGene:Aae.11304 STRING:Q17DK5
EnsemblMetazoa:AAEL004146-RA GeneID:5564182
KEGG:aag:AaeL_AAEL004146 VectorBase:AAEL004146 eggNOG:COG0415
HOGENOM:HOG000245622 KO:K02295 OMA:QMFLHTV OrthoDB:EOG437PW2
PhylomeDB:Q17DK5 GO:GO:0009882 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 PROSITE:PS51645 Uniprot:Q17DK5
Length = 545
Score = 342 (125.4 bits), Expect = 3.6e-38, Sum P(3) = 3.6e-38
Identities = 82/236 (34%), Positives = 128/236 (54%)
Query: 243 LSPYLHFGELSVRKVFQCLW-MKQILWAKEE-NFEGKESVTFFLRAMGLREYSRYLCFNF 300
+S L FG LSVR + C+ + + + A + G + +T L REY + +
Sbjct: 265 MSAALRFGCLSVRMFYWCVHDLYEKVQANNQYRNPGGQHITGQLI---WREYFYTMSVHN 321
Query: 301 PFTHE---RPLLSNLKYFPWHADLGN-FKAWRQGRTGYPLVDAGMRELWATGWIHNRIRV 356
P E P+ N+ PW+ + W++GRTG+P++DA MR+L A GW+H+ +R
Sbjct: 322 PHYAEMEANPICLNI---PWYEPKDDSLDRWKEGRTGFPMIDAAMRQLLAEGWLHHILRN 378
Query: 357 IVSSFAVK-VLLLPWRWGMKYFWDTLLDADLECDILGWQYISGSLPDGH-ELERLDSPEI 414
I ++F + L + W G+++F LLDAD W ++S S + + SP
Sbjct: 379 ITATFLTRGALWISWEAGVQHFLKYLLDADWSVCAGNWMWVSSSAFEKLLDSSSCTSPIA 438
Query: 415 QGSKFDPEGEYVRQWLPELARMPTEWIHHPWDAPPNVLKAAGVELGLNYPKPIIDL 470
+ DP+GEYVR++LPEL +PT ++H PW AP +V K G +G +YP P+IDL
Sbjct: 439 LARRLDPKGEYVRRYLPELKNLPTLYVHEPWKAPLDVQKECGCIVGRDYPAPMIDL 494
Score = 126 (49.4 bits), Expect = 3.6e-38, Sum P(3) = 3.6e-38
Identities = 36/145 (24%), Positives = 68/145 (46%)
Query: 7 IVWFRRDLRIEDNPALAAAAR-DGS------VFPVYTWCPKEEGQFYPGRVSRWWLKQSL 59
I+WFR LR+ DNP+L A R DG+ ++P++ + + G G +L +SL
Sbjct: 6 ILWFRHGLRLHDNPSLLEALRNDGTGSESVRLYPIFIFDGESAGTKLVGFNRMKFLLESL 65
Query: 60 SYLGQSLKSLGAELVLFKTESTLAALLECISAIKATKVVFNHLYDPVSLVRDHSIKEKLV 119
+ L + L+ +G +L +FK + + + + K+ F +P+ RD +I+
Sbjct: 66 ADLDRQLREIGGQLYVFKGNA-VNVMRRLFEELNIRKLCFEQDCEPIWKARDDAIQNLCR 124
Query: 120 ELGISVQSYNGDLLYEPWEIYDERG 144
+ + L++P +I G
Sbjct: 125 MMDVKCVEKVSHTLWDPQQIIRTNG 149
Score = 42 (19.8 bits), Expect = 3.6e-38, Sum P(3) = 3.6e-38
Identities = 14/49 (28%), Positives = 21/49 (42%)
Query: 513 PAIPQVVLREKSTCPTISSNDQKVPSFQNGKNNLPSRKRPKNVEEERQY 561
PA P + L S + N + + G + P RP +VEE R +
Sbjct: 488 PA-PMIDLAAASRANANTMNSIRQKLMERG-GSTPPHCRPSDVEEIRNF 534
>ASPGD|ASPL0000053661 [details] [associations]
symbol:cryA species:162425 "Emericella nidulans"
[GO:0003904 "deoxyribodipyrimidine photo-lyase activity"
evidence=IGI] [GO:0005634 "nucleus" evidence=IDA] [GO:0000719
"photoreactive repair" evidence=IGI] [GO:0070797 "negative
regulation of cleistothecium development" evidence=IMP] [GO:0071483
"cellular response to blue light" evidence=IMP] [GO:0071492
"cellular response to UV-A" evidence=IMP] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0003729
"mRNA binding" evidence=IEA] [GO:0070791 "cleistothecium
development" evidence=IMP] InterPro:IPR002081 InterPro:IPR005101
InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
PROSITE:PS00691 InterPro:IPR006050 Pfam:PF00875 EMBL:BN001308
GO:GO:0006281 EMBL:AACD01000007 Gene3D:3.40.50.620
InterPro:IPR014729 eggNOG:COG0415 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 HOGENOM:HOG000245621 KO:K01669 OrthoDB:EOG4XPTQ3
RefSeq:XP_657991.1 ProteinModelPortal:Q5BGE3 STRING:Q5BGE3
EnsemblFungi:CADANIAT00002312 GeneID:2876167 KEGG:ani:AN0387.2
OMA:HMAPRQA Uniprot:Q5BGE3
Length = 567
Score = 416 (151.5 bits), Expect = 4.4e-38, P = 4.4e-38
Identities = 140/501 (27%), Positives = 231/501 (46%)
Query: 1 MGGNRTIV-WFRRDLRIEDNPALAAA---ARDGSV--FPVYTWCPKEEGQFY--PGRVSR 52
M N +V WF+ DLR+ DN AL A AR+ + +Y P++ P RV
Sbjct: 71 MTANAAVVHWFKSDLRLHDNRALQMAYRVAREHKIPLIGLYILSPEDLTAHLSSPARVDL 130
Query: 53 WWLKQSLSYLGQSLKSLGAELVLFKTESTLAALLECISAIKATKVVFNHLYDPVSLVRDH 112
++L L + L L L + +T++ + I + + NHL+ + D
Sbjct: 131 --TLRTLEQLKRDLGELDVPLYM-ETQACRKDIPRRIINL-CQEWGANHLFANLEYEVDE 186
Query: 113 SIKE-KLVEL----GISVQSYNGDLLYEPWEIYDERGHAFTTFDAY---W-------DKC 157
+E KL+ L GI ++ + + P + ++G + + + W +
Sbjct: 187 LRREAKLIRLCAENGIRFETAHDMCVVPPGVLSSQQGRQYAVYSPWFRSWLAFLNENPEY 246
Query: 158 LQMQMEPASILPPWRLVQAAGTIDGCSIEDLGLE---DESEKSSNALLGRGWSPGWSNAD 214
L++ +P S P + + C + D+ EK+ + R + G
Sbjct: 247 LEVSEDPTS--NPGDARRYFKELFECPVPATPENKRFDDVEKADR--VRRAFPAGEHEGL 302
Query: 215 KVLTEFVEQHLLRYYKNRQKLGGNSTSLLSPYLHFGELSVRKVFQCLWMKQILWAKEENF 274
+ L EF+E+ Y R L G +TS LSPY G LS R + A+E N
Sbjct: 303 RRLEEFLEK-ATAYDDERNFLSGETTSKLSPYFASGSLSARTA--------VAKAREANA 353
Query: 275 ----EGKESVTFFLRAMGLREYSRYLCFNFPFTHERPLLS-NLKYFPWHADLGNFKAWRQ 329
G+ ++ + R++ +++ ++PF W + +F+AW
Sbjct: 354 GKISRGEAGYISWISEVAWRDFYKHVLVHWPFICMNKCFKFEFTNIDWSYNNTHFEAWAA 413
Query: 330 GRTGYPLVDAGMRELWATGWIHNRIRVIVSSFAVKVLLLPWRWGMKYFWDTLLDADLECD 389
G+TGYPLVDA MR+L AT W+HNR R++VSSF K LL+ WR G +YF + L+D D +
Sbjct: 414 GKTGYPLVDAAMRQLHATAWMHNRCRMVVSSFLCKDLLIDWRRGERYFMEHLIDGDFASN 473
Query: 390 ILGWQYISGSLPDGHELERLDSPEIQGSKFDPEGEYVRQWLPELARMPTEWIHHPWD-AP 448
GW + S + D R+ +P Q +FDP+GE++R+W+PEL + IH P++
Sbjct: 474 HGGWGFGSSTGVDPQPYFRIFNPIRQSERFDPDGEFIRRWVPELRGVEGNAIHAPYERGA 533
Query: 449 PNVLKAAGVELGLNYPKPIID 469
++ +A G YP+PI+D
Sbjct: 534 GDIARANG------YPEPIVD 548
>UNIPROTKB|F1PNC9 [details] [associations]
symbol:CRY2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0003913 "DNA photolyase activity" evidence=IEA]
InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875
GO:GO:0006281 Gene3D:3.40.50.620 InterPro:IPR014729 KO:K02295
GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
GeneTree:ENSGT00500000044813 CTD:1408 OMA:LCKHLLI EMBL:AAEX03011505
RefSeq:XP_540761.2 Ensembl:ENSCAFT00000014927 GeneID:483641
KEGG:cfa:483641 Uniprot:F1PNC9
Length = 593
Score = 423 (154.0 bits), Expect = 4.4e-38, P = 4.4e-38
Identities = 135/486 (27%), Positives = 221/486 (45%)
Query: 3 GNRTIVWFRRDLRIEDNPALAAAARDGS-VFPVYTWCPKEEGQFYPGRVSRW-WLKQSLS 60
G ++ WFR+ LR+ DNPAL AA R V VY P G ++RW +L QSL
Sbjct: 21 GASSVHWFRKGLRLHDNPALLAAVRGARCVRCVYILDPWFAASSSVG-INRWRFLLQSLE 79
Query: 61 YLGQSLKSLGAELVLFKTESTLAALLECISAIKATKVVFNHLYDPVSLVRDHSIKEKLVE 120
L SL+ L + L + + + T++ F + +P RD +I + E
Sbjct: 80 DLDTSLRKLNSRLFVVRGQPA-DVFPRLFKEWGVTRLTFEYDSEPFGKERDAAIMKMAKE 138
Query: 121 LGISVQSYNGDLLYEPWEIYDERGH----AFTTFDAYWDKCLQMQMEPASILPPWRLVQA 176
G+ V + N LY+ +I + G + F A + +++ +P + ++
Sbjct: 139 AGVEVVTENSHTLYDLDKIIELNGQKPPLTYKRFQAIISR-MELPKKPVGSVTSQQMESC 197
Query: 177 AGTIDGCSIEDLGLEDESEKSSNALLGRGWSPG-WSNADKVLTEFVEQHLLR--YYKNRQ 233
I + G+ E G P W + +++HL R + N +
Sbjct: 198 RADIQDNHDDTYGVPSLEELGFPT---EGLGPAVWQGGETEALARLDKHLERKAWVANYE 254
Query: 234 KLGGNSTSLL------SPYLHFGELSVRKVFQCLWMKQILWAKEENFEGKESVTFFLRAM 287
+ N+ SLL SPYL FG LS R + LW L+ K + ++ F + +
Sbjct: 255 RPRMNANSLLASPTGLSPYLRFGCLSCRLFYYRLWD---LYKKVKR-NSTPPLSLFGQLL 310
Query: 288 GLREYSRYLCFNFP-FTHER--PLLSNLKYFPWHADLGNFKAWRQGRTGYPLVDAGMREL 344
RE+ N P F P+ + PW + W +G+TG+P +DA M +L
Sbjct: 311 W-REFFYTAATNNPRFDRMEGNPICIQI---PWDRNPEALAKWAEGKTGFPWIDAIMTQL 366
Query: 345 WATGWIHNRIRVIVSSFAVKV-LLLPWRWGMKYFWDTLLDADLECDILGWQYISGSLPDG 403
GWIH+ R V+ F + L + W G++ F + LLDAD + W ++S S
Sbjct: 367 RQEGWIHHLARHAVACFLTRGDLWVSWESGVRVFDELLLDADFSVNAGSWMWLSCSA-FF 425
Query: 404 HELERLDSPEIQGSKFDPEGEYVRQWLPELARMPTEWIHHPWDAPPNVLKAAGVELGLNY 463
+ P G + DP G+Y+R++LP L P+ +I+ PW+AP ++ KAA +G++Y
Sbjct: 426 QQFFHCYCPVGFGRRTDPSGDYIRRYLPILKGFPSRYIYEPWNAPESIQKAAKCIIGVDY 485
Query: 464 PKPIID 469
P+PI++
Sbjct: 486 PRPIVN 491
>ZFIN|ZDB-GENE-040617-2 [details] [associations]
symbol:cry-dash "cryptochrome DASH" species:7955
"Danio rerio" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0003684 "damaged DNA
binding" evidence=IDA] [GO:0050660 "flavin adenine dinucleotide
binding" evidence=IDA] [GO:0000719 "photoreactive repair"
evidence=IDA] [GO:0003904 "deoxyribodipyrimidine photo-lyase
activity" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0018298
"protein-chromophore linkage" evidence=IEA] InterPro:IPR002081
InterPro:IPR005101 Pfam:PF03441 PRINTS:PR00147 InterPro:IPR006050
Pfam:PF00875 ZFIN:ZDB-GENE-040617-2 GO:GO:0050660 GO:GO:0003684
GO:GO:0000719 Gene3D:3.40.50.620 InterPro:IPR014729 SUPFAM:SSF52425
SUPFAM:SSF48173 GeneTree:ENSGT00500000044813 GO:GO:0003904
InterPro:IPR014133 TIGRFAMs:TIGR02765 EMBL:BX247944 IPI:IPI00495554
Ensembl:ENSDART00000139329 ArrayExpress:F1R5N7 Bgee:F1R5N7
Uniprot:F1R5N7
Length = 521
Score = 392 (143.0 bits), Expect = 7.2e-38, Sum P(2) = 7.2e-38
Identities = 142/494 (28%), Positives = 239/494 (48%)
Query: 1 MGGNRTIVWF-RRDLRIEDNPALAAAARDGS-VFPVYTWCPKE-EGQF---YP--GRVSR 52
M +RT++ R DLR+ DN A R+ + P+Y + P+ +G + +P G
Sbjct: 2 MSASRTVICLLRNDLRLHDNEVFHWAQRNAEHIIPLYCFDPRHYQGTYHYNFPKTGPFRL 61
Query: 53 WWLKQSLSYLGQSLKSLGAELVLF--KTESTLAALLECISAIKATKVVFNHLYDPVSLVR 110
+L S+ L LK G+ L++ K E + L++ + ++ V F ++ V+
Sbjct: 62 RFLLDSVKDLRALLKKHGSTLLVRQGKPEDVVCELIKQLGSVST--VAF---HEEVAS-E 115
Query: 111 DHSIKEKLVEL----GISVQSYNGDLLYEPWEIYDERGHAFTTFDAY--WDKCLQMQMEP 164
+ S++EKL E+ + VQ++ G LY ++ H D Y + K ++ Q
Sbjct: 116 EKSVEEKLKEICCQNKVRVQTFWGSTLYHRDDL--PFSHIGGLPDVYTQFRKAVEAQGRV 173
Query: 165 ASILPPWRLVQA--AGTIDGC--SIEDLGLEDESEKSSNALLGRGWSPGWSNADKVLTE- 219
+L V++ +G +G + + LG + + +A RG G + A L
Sbjct: 174 RPVLSTPEQVKSPPSGLEEGPIPTFDSLGQTEPLDDCRSAFPCRG---GETEALARLKHY 230
Query: 220 FVEQHLLRYYKNRQK--LGGNSTSLLSPYLHFGELSVRKVFQCLWMKQILWAKEENFEGK 277
F + + + YK + +G + ++ SP+L G +S R +++ QI + E
Sbjct: 231 FWDTNAVATYKETRNGMIGVDFSTKFSPWLALGCISPRYIYE-----QIKKYEVER-TAN 284
Query: 278 ESVTFFLRAMGLREYSRYLCFNFPFTHERPLLSNL--KYFPWHADLGNFKAWRQGRTGYP 335
+S + + + R+Y +++ + + ++ L K+ PW+ D+ F AW++GRTG P
Sbjct: 285 QSTYWVIFELLWRDYFKFVALKYG--NRIFYMNGLQDKHVPWNTDMKMFDAWKEGRTGVP 342
Query: 336 LVDAGMRELWATGWIHNRIRVIVSSFAVKVLLLPWRWGMKYFWDTLLDADLECDILG-WQ 394
VDA MREL TG++ NR R V+SF K L L WR G ++F L+D D+ C G W
Sbjct: 343 FVDANMRELALTGFMSNRGRQNVASFLTKDLGLDWRLGAEWFEYLLVDHDV-CSNYGNWL 401
Query: 395 YISGSLPDGHELERLDSPEIQGSKFDPEGEYVRQWLPELARMPTEWIHHPWDAPPNVLKA 454
Y +G D E + + + QG +D G+YVRQW+PEL + +H PW + L
Sbjct: 402 YSAGIGNDPRENRKFNMIK-QGLDYDNNGDYVRQWVPELRGIKGGDVHTPWTLSNSALSH 460
Query: 455 AGVELGLNYPKPII 468
A V L YP PII
Sbjct: 461 AQVSLNQTYPCPII 474
Score = 40 (19.1 bits), Expect = 7.2e-38, Sum P(2) = 7.2e-38
Identities = 16/60 (26%), Positives = 28/60 (46%)
Query: 517 QVVLREKSTCPTISSND--QKVPSFQNGKNNLPSRKRPKNVEEERQYPD---ELYSCKNE 571
QV L + CP I++ + + V + +G ++ RK RQ+ D + Y KN+
Sbjct: 462 QVSLNQTYPCPIITAPEWSRHVNNKSSGSSSSKGRKGSSYTA--RQHKDRGIDFYFSKNK 519
>FB|FBgn0016054 [details] [associations]
symbol:phr6-4 "(6-4)-photolyase" species:7227 "Drosophila
melanogaster" [GO:0006281 "DNA repair" evidence=ISS] [GO:0003914
"DNA (6-4) photolyase activity" evidence=ISS;NAS]
InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875
EMBL:AE014134 GO:GO:0006281 Gene3D:3.40.50.620 InterPro:IPR014729
eggNOG:COG0415 KO:K02295 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 GeneTree:ENSGT00500000044813 OMA:CLSARTF
EMBL:BT044074 RefSeq:NP_477188.1 RefSeq:NP_724274.1 UniGene:Dm.7857
SMR:Q0E8P0 STRING:Q0E8P0 EnsemblMetazoa:FBtr0081404
EnsemblMetazoa:FBtr0081405 GeneID:35322 KEGG:dme:Dmel_CG2488
UCSC:CG2488-RA CTD:35322 FlyBase:FBgn0016054 InParanoid:Q0E8P0
OrthoDB:EOG49W0WG GenomeRNAi:35322 NextBio:792949 Uniprot:Q0E8P0
Length = 540
Score = 400 (145.9 bits), Expect = 9.2e-37, P = 9.2e-37
Identities = 139/486 (28%), Positives = 224/486 (46%)
Query: 6 TIV-WFRRDLRIEDNPAL-----AAAARDGSVF--PVYTWCPKEEGQFYPGRVSRW-WLK 56
T+V WFR+ LR+ DNPAL AA A G F P++ P G +RW +L+
Sbjct: 7 TLVHWFRKGLRLHDNPALSHIFTAANAAPGKYFVRPIFILDPGILDWMQVG-ANRWRFLQ 65
Query: 57 QSLSYLGQSLKSLGAELVLFKTESTLAALLECISAIKATKVVFNHLYDPVSLVRDHSIKE 116
Q+L L L+ L + L + + + + + + F +P S+ RD ++++
Sbjct: 66 QTLEDLDNQLRKLNSRLFVVRGKPA-EVFPRIFKSWRVEMLTFETDIEPYSVTRDAAVQK 124
Query: 117 KLVELGISVQSYNGDLLYEPWEIYDER-GHAFTTFDAYWDKCLQMQMEPASILPPWRLVQ 175
G+ V+++ +Y P + + G A T+ + Q+++ P + P +L
Sbjct: 125 LAKAEGVRVETHCSHTIYNPELVIAKNLGKAPITYQKFLGIVEQLKV-PKVLGVPEKLKN 183
Query: 176 A-AGTIDGCSIEDLGLED-----ESEKSSNALLGRGWSPGWSNADKVLTEFVEQHL--LR 227
D +D D + K L + G + A + + E ++ + R
Sbjct: 184 MPTPPKDEVEQKDSAAYDCPTMKQLVKRPEELGPNKFPGGETEALRRMEESLKDEIWVAR 243
Query: 228 YYKNRQKLGG--NSTSLLSPYLHFGELSVRKVFQCLWMKQILWAKEENFEGKESVTFFLR 285
+ K ST++LSPYL FG LS R Q L K+I+ K + + V+ +
Sbjct: 244 FEKPNTAPNSLEPSTTVLSPYLKFGCLSARLFNQKL--KEII--KRQPKHSQPPVSLIGQ 299
Query: 286 AMGLREYSRYLCFNFPFTHERPLLSNL--KYFPWHADLGNFKAWRQGRTGYPLVDAGMRE 343
M RE+ + P +R +L N+ PW + +AW GRTGYP +DA MR+
Sbjct: 300 LMW-REFYYTVAAAEP-NFDR-MLGNVYCMQIPWQEHPDHLEAWTHGRTGYPFIDAIMRQ 356
Query: 344 LWATGWIHNRIRVIVSSFAVKV-LLLPWRWGMKYFWDTLLDADLECDILGWQYISGSLPD 402
L GWIH+ R V+ F + L + W G + F LLD D + W ++S S
Sbjct: 357 LRQEGWIHHLARHAVACFLTRGDLWISWEEGQRVFEQLLLDQDWALNAGNWMWLSASA-F 415
Query: 403 GHELERLDSPEIQGSKFDPEGEYVRQWLPELARMPTEWIHHPWDAPPNVLKAAGVELGLN 462
H+ R+ SP G K DP+G Y+R+++PEL++ P I+ PW A +A G LG +
Sbjct: 416 FHQYFRVYSPVAFGKKTDPQGHYIRKYVPELSKYPAGCIYEPWKASLVDQRAYGCVLGTD 475
Query: 463 YPKPII 468
YP I+
Sbjct: 476 YPHRIV 481
>ZFIN|ZDB-GENE-010426-7 [details] [associations]
symbol:cry4 "cryptochrome 4" species:7955 "Danio
rerio" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0009881 "photoreceptor
activity" evidence=IDA] InterPro:IPR005101 Pfam:PF03441
InterPro:IPR006050 Pfam:PF00875 ZFIN:ZDB-GENE-010426-7
GO:GO:0006281 GO:GO:0009881 Gene3D:3.40.50.620 InterPro:IPR014729
GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
GeneTree:ENSGT00500000044813 EMBL:FP085425 IPI:IPI00995476
Ensembl:ENSDART00000126053 Uniprot:E7F1Z7
Length = 582
Score = 412 (150.1 bits), Expect = 9.5e-37, P = 9.5e-37
Identities = 150/487 (30%), Positives = 234/487 (48%)
Query: 4 NRTIVWFRRDLRIEDNPALAAA-ARDGSVFPVYTWCPKE-EGQFYPGRVSRW-WLKQSLS 60
+RTI FR+ LR+ DNP+L A A +++PVY +G + G + RW +L QSL
Sbjct: 24 HRTIHLFRKGLRLHDNPSLLGALASSSALYPVYVLDRVFLQGAMHMGAL-RWRFLLQSLE 82
Query: 61 YLGQSLKSLGAELVLFKTESTLAALLECISAIKATKVVFNHLYDPVSLVRDHSIKEKLVE 120
L L+++G+ L + ST L E ++ T++ ++ +P D I+ E
Sbjct: 83 DLDTRLQAIGSRLFVL-CGSTANILRELVAQWGITQISYDTEVEPYYTRMDKDIQTVAQE 141
Query: 121 LGISVQSYNGDLLYEPWEIYDERGHAFT-TFDAYWD--KCLQMQMEPA---SILP-PWRL 173
G+ + LY+ I G + T+ + L +PA SI R
Sbjct: 142 NGLQTYTCVSHTLYDVKRIVKANGGSPPLTYKKFLHVLSVLGEPEKPARDVSIEDFQRRQ 201
Query: 174 VQAAGTIDGC----SIEDLGLEDESEKSSNALLGRGWSPGWSNA-DKVLTEFVEQH--LL 226
Q+ +D S+ DLGL+ E+E +L W G S+A ++ F Q +
Sbjct: 202 QQSMMDVDRVYAVPSLADLGLQVEAE-----VL---WPGGESHALQRLEKHFQSQQGWVA 253
Query: 227 RYYKNRQKLGG--NSTSLLSPYLHFGELSVRKVFQCLWMKQILWAKEENFEGKESVTFFL 284
+ K R ST+ LSPYL G LSVR + L ++A+ +N V+ L
Sbjct: 254 NFSKPRTIPNSLLPSTTGLSPYLSLGCLSVRTFYHRL---NSIYAQSKN-HSLPPVS--L 307
Query: 285 RAMGL-REYSRYLCFNFP-FTHERPLLSNLKYFPWHADLGNFKAWRQGRTGYPLVDAGMR 342
+ L RE+ + P FT L+ W+ D + WR +TG+P +DA M
Sbjct: 308 QGQVLWREFFYTVASATPNFTKMEGNSICLQ-IDWYHDPERLEKWRTAQTGFPWIDAIMT 366
Query: 343 ELWATGWIHNRIRVIVSSFAVKV-LLLPWRWGMKYFWDTLLDADLECDILGWQYISGSLP 401
+L GWIH+ R V+ F + L + W GMK F + LLDAD + W ++S S
Sbjct: 367 QLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEEFLLDADYSVNAGNWMWLSASA- 425
Query: 402 DGHELERLDSPEIQGSKFDPEGEYVRQWLPELARMPTEWIHHPWDAPPNVLKAAGVELGL 461
H+ R+ P G + DP+GEY+R++LP L P+++I+ PW AP +V +AG +G
Sbjct: 426 FFHKYTRIFCPVRFGRRTDPQGEYLRKYLPVLKNFPSQYIYEPWKAPEDVQLSAGCIIGK 485
Query: 462 NYPKPII 468
+YP+PI+
Sbjct: 486 DYPRPIV 492
>UNIPROTKB|F1N0J9 [details] [associations]
symbol:Bt.20450 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000118 "regulation of sodium-dependent phosphate
transport" evidence=IEA] [GO:0042752 "regulation of circadian
rhythm" evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IEA]
[GO:0006606 "protein import into nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=IEA] [GO:0003684 "damaged
DNA binding" evidence=IEA] [GO:0000988 "protein binding
transcription factor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0003913
"DNA photolyase activity" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 GO:GO:0005739
GO:GO:0005634 GO:GO:0003684 GO:GO:0007623 GO:GO:0006281
GO:GO:0042752 GO:GO:0000122 GO:GO:0006606 GO:GO:0003697
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 GeneTree:ENSGT00500000044813 GO:GO:0000988
EMBL:DAAA02041566 EMBL:DAAA02041564 EMBL:DAAA02041565
IPI:IPI00698451 Ensembl:ENSBTAT00000028277 OMA:DIQENHD
Uniprot:F1N0J9
Length = 610
Score = 410 (149.4 bits), Expect = 3.8e-36, P = 3.8e-36
Identities = 135/488 (27%), Positives = 224/488 (45%)
Query: 3 GNRTIVWFRRDLRIEDNPALAAAARDGS-VFPVYTWCPKEEGQFYPGRVSRW--WLKQSL 59
G ++ WFR+ LR+ DNPAL AA R V VY P G ++RW ++KQ +
Sbjct: 38 GASSVHWFRKGLRLHDNPALLAAVRGAHCVRCVYILDPWFAASSSVG-INRWRRYVKQGV 96
Query: 60 SYLGQSLKSLGAELV-LFKTESTLAALLECISAIKATKVVFNHLYDPVSLVRDHSIKEKL 118
L+ LV +K S+ +L + + T++ F + +P RD +I +
Sbjct: 97 EIKETVLRKTSGNLVSCWKVPSS-DSLPQQEWGV--TRLTFEYDSEPFGKERDTAIMKMA 153
Query: 119 VELGISVQSYNGDLLYEPWEIYDERGH----AFTTFDAYWDKCLQMQMEPASILPPWRLV 174
E G+ V + N LY+ +I + G + F A + +++ +P + ++
Sbjct: 154 KEAGVEVVTENSHTLYDLDKIIELNGQKPPLTYKRFQAIISR-MELPRKPVGSVTSQQME 212
Query: 175 QAAGTIDGCSIEDLGLEDESEKSSNALLGRGWSPG-WSNADKVLTEFVEQHLLR--YYKN 231
I E G+ E G P W + +++HL R + N
Sbjct: 213 GCRAEIQESHDETYGVPSLEELGFPT---EGLGPAVWQGGETEALARLDKHLERKAWVAN 269
Query: 232 RQKLGGNSTSLL------SPYLHFGELSVRKVFQCLWMKQILWAKEENFEGKESVTFFLR 285
++ N+ SLL SPYL FG LS R + LW L+ K + ++ F +
Sbjct: 270 YERPRMNANSLLASPTGLSPYLRFGCLSCRLFYYRLWD---LYKKVKR-NSTPPLSLFGQ 325
Query: 286 AMGLREYSRYLCFNFP-FTHER--PLLSNLKYFPWHADLGNFKAWRQGRTGYPLVDAGMR 342
+ RE+ N P F P+ + PW + W +G+TG+P +DA M
Sbjct: 326 LLW-REFFYTAATNNPRFDRMEGNPICIQI---PWDRNPEALAKWAEGKTGFPWIDAIMT 381
Query: 343 ELWATGWIHNRIRVIVSSFAVKV-LLLPWRWGMKYFWDTLLDADLECDILGWQYISGSLP 401
+L GWIH+ R V+ F + L + W G++ F + LLDAD + W ++S S
Sbjct: 382 QLRQEGWIHHLARHAVACFLTRGDLWVSWESGVRVFDELLLDADFSVNAGSWMWLSCSA- 440
Query: 402 DGHELERLDSPEIQGSKFDPEGEYVRQWLPELARMPTEWIHHPWDAPPNVLKAAGVELGL 461
+ P G + DP G+Y+R++LP+L P+ +I+ PW+AP ++ KAA +G+
Sbjct: 441 FFQQFFHCYCPVGFGRRTDPSGDYIRRYLPKLKGFPSRYIYEPWNAPESIQKAAKCVIGV 500
Query: 462 NYPKPIID 469
+YP+PI++
Sbjct: 501 DYPRPIVN 508
>UNIPROTKB|Q2TV23 [details] [associations]
symbol:LOC395100 "Cryptochrome-like protein" species:9031
"Gallus gallus" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 GO:GO:0006281
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
HOGENOM:HOG000245622 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
HOVERGEN:HBG053470 GeneTree:ENSGT00500000044813 EMBL:AADN02063941
EMBL:AY300013 IPI:IPI00782853 RefSeq:NP_001034685.1
UniGene:Gga.5544 Ensembl:ENSGALT00000000143 GeneID:395100
KEGG:gga:395100 InParanoid:Q2TV23 OrthoDB:EOG479F6W
NextBio:20815193 Uniprot:Q2TV23
Length = 529
Score = 394 (143.8 bits), Expect = 4.3e-36, P = 4.3e-36
Identities = 143/486 (29%), Positives = 225/486 (46%)
Query: 4 NRTIVWFRRDLRIEDNPALAAAARDGSV-FPVYTWCPK-EEGQFYPGRVSRW-WLKQSLS 60
+RTI FR+ LR+ DNPAL AA + V +PVY + G + RW +L QSL
Sbjct: 3 HRTIHLFRKGLRLHDNPALLAALQSSEVVYPVYILDRAFMTSSMHIGAL-RWHFLLQSLE 61
Query: 61 YLGQSLKSLGAELVLFKTESTLAALLECISAIKATKVVFNHLYDPVSLVRDHSIKEKLVE 120
L SL+ LG+ L++ + E + + + + T+V + +P + +I+ E
Sbjct: 62 DLRSSLRQLGSCLLVIQGEYE-SVVRDHVQKWNITQVTLDAEMEPFYKEMEANIRGLGEE 120
Query: 121 LGISVQSYNGDLLYEPWEIYDERGHAFT-TFDAYWDKCLQMQMEPASILPPWRLVQAAGT 179
LG V S G LY I + G T+ + + L + +P P R A
Sbjct: 121 LGFQVLSLMGHSLYNTQRILELNGGTPPLTYKRFL-RILSLLGDPEV---PVRN-PTAED 175
Query: 180 IDGCSIEDLGLED---ESEKSSNALLGRGWSPGWSNADKVLTEFVEQHL-----LRYYKN 231
CS +LGL + + + SP W + + +EQHL + +
Sbjct: 176 FQRCSPPELGLAECYGVPLPTDLKIPPESISP-WRGGESEGLQRLEQHLADQGWVASFTK 234
Query: 232 RQKLGGN---STSLLSPYLHFGELSVRKVFQCLWMKQILWAKEENFEGKESVTFFLRAMG 288
+ + + ST+ LSPY G LSVR F L ++A+ ++ V+ L+
Sbjct: 235 PKTVPNSLLPSTTGLSPYFSTGCLSVRSFFYRL---SNIYAQAKH-HSLPPVS--LQGQL 288
Query: 289 L-REYSRYLCFNFP-FTHE--RPLLSNLKYFPWHADLGNFKAWRQGRTGYPLVDAGMREL 344
L RE+ + P FT P+ ++ W+ D W+ +TG+P +DA M +L
Sbjct: 289 LWREFFYTVASATPNFTKMAGNPICLQIR---WYEDAERLHKWKTAQTGFPWIDAIMTQL 345
Query: 345 WATGWIHNRIRVIVSSFAVKV-LLLPWRWGMKYFWDTLLDADLECDILGWQYISGSLPDG 403
GWIH+ R + F + L + W GMK F + LLDAD + W ++S S
Sbjct: 346 RQEGWIHHLARHAAACFLTRGDLWISWEEGMKVFEELLLDADYSINAGNWMWLSASA-FF 404
Query: 404 HELERLDSPEIQGSKFDPEGEYVRQWLPELARMPTEWIHHPWDAPPNVLKAAGVELGLNY 463
H R+ P G + DPEG+Y+R++LP L P+++I+ PW A K AG +G +Y
Sbjct: 405 HHYTRIFCPVRFGRRTDPEGQYIRKYLPILKNFPSKYIYEPWTASEEEQKQAGCIIGRDY 464
Query: 464 PKPIID 469
P P++D
Sbjct: 465 PFPMVD 470
>UNIPROTKB|F1NYE9 [details] [associations]
symbol:CRY1 "Cryptochrome-1" species:9031 "Gallus gallus"
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] InterPro:IPR005101 Pfam:PF03441
InterPro:IPR006050 Pfam:PF00875 GO:GO:0006281 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
IPI:IPI00577266 GeneTree:ENSGT00500000044813 EMBL:AADN02006287
EMBL:AADN02006288 EMBL:AADN02006289 Ensembl:ENSGALT00000020627
ArrayExpress:F1NYE9 Uniprot:F1NYE9
Length = 621
Score = 405 (147.6 bits), Expect = 1.8e-35, P = 1.8e-35
Identities = 140/485 (28%), Positives = 220/485 (45%)
Query: 1 MGGNRTIVWFRRDLRIEDNPALAAAARDG-SVFPVYTWCPKEEGQFYPGRVSRW-WLKQS 58
MG N + WFR+ LR+ DNPAL R +V VY P G G ++RW +L Q
Sbjct: 1 MGVN-AVHWFRKGLRLHDNPALRECIRGADTVRCVYILDPWFAGSSNVG-INRWRFLLQC 58
Query: 59 LSYLGQSLKSLGAELVLFKTESTLAALLECISAIKATKVVFNHLYDPVSLVRDHSIKEKL 118
L L +L+ L + L + + + K+ + +P RD +IK+
Sbjct: 59 LEDLDANLRKLNSRLFVIRGQPA-DVFPRLFKEWSIAKLSIEYDSEPFGKERDAAIKKLA 117
Query: 119 VELGISVQSYNGDLLYEPWEIYD-ERGHAFTTFDAYWDKCLQMQ-ME-PASILPPWRLVQ 175
E G+ V LY+ +I + G T+ + +M+ +E P + P + +
Sbjct: 118 SEAGVEVIVRISHTLYDLDKIIELNGGQPPLTYKRFQTLISRMEPLEMPVETITPEVMQK 177
Query: 176 AAGTIDGCSIEDLGLEDESEKS--SNALLGRGWSPGWSNADKVLTEFVEQHLLR--YYKN 231
+ E G+ E ++ L W G + A LT +E+HL R + N
Sbjct: 178 CTTPVSDDHDEKYGVPSLEELGFDTDGLPSAVWPGGETEA---LTR-LERHLERKAWVAN 233
Query: 232 RQKLGGNSTSLL------SPYLHFGELSVRKVFQCLWMKQILWAKEENFEGKESVTFFLR 285
++ N+ SLL SPYL FG LS R +F + K K+ ++ + +
Sbjct: 234 FERPRMNANSLLASPTGLSPYLRFGCLSCR-LF---YFKLTDLYKKVKKNSSPPLSLYGQ 289
Query: 286 AMGLREYSRYLCFNFPFTHERPLLSNLKYFPWHADLGNFKAWRQGRTGYPLVDAGMRELW 345
+ RE+ N P + PW + W +GRTG+P +DA M +L
Sbjct: 290 LLW-REFFYTAATNNPRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLR 348
Query: 346 ATGWIHNRIRVIVSSFAVKV-LLLPWRWGMKYFWDTLLDADLECDILGWQYISGSLPDGH 404
GWIH+ R V+ F + L + W GMK F + LLDAD + W ++S S
Sbjct: 349 QEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSVNAGSWMWLSCS-SFFQ 407
Query: 405 ELERLDSPEIQGSKFDPEGEYVRQWLPELARMPTEWIHHPWDAPPNVLKAAGVELGLNYP 464
+ P G + DP G+Y+R++LP L P ++I+ PW+AP +V KAA +G+NYP
Sbjct: 408 QFFHCYCPVGFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNAPESVQKAAKCVIGVNYP 467
Query: 465 KPIID 469
KP+++
Sbjct: 468 KPMVN 472
>UNIPROTKB|Q8QG61 [details] [associations]
symbol:CRY1 "Cryptochrome-1" species:9031 "Gallus gallus"
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009881 "photoreceptor activity"
evidence=IEA] [GO:0018298 "protein-chromophore linkage"
evidence=IEA] [GO:0048511 "rhythmic process" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 GO:GO:0005634 GO:GO:0005737
GO:GO:0006355 GO:GO:0000166 GO:GO:0006281 GO:GO:0006351
GO:GO:0048511 GO:GO:0009881 GO:GO:0018298 Gene3D:3.40.50.620
InterPro:IPR014729 eggNOG:COG0415 HOGENOM:HOG000245622 KO:K02295
GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645
EMBL:AY034432 IPI:IPI00577266 RefSeq:NP_989576.1 UniGene:Gga.4107
ProteinModelPortal:Q8QG61 STRING:Q8QG61 GeneID:374093
KEGG:gga:374093 CTD:1407 HOVERGEN:HBG053470 NextBio:20813612
Uniprot:Q8QG61
Length = 621
Score = 405 (147.6 bits), Expect = 1.8e-35, P = 1.8e-35
Identities = 140/485 (28%), Positives = 220/485 (45%)
Query: 1 MGGNRTIVWFRRDLRIEDNPALAAAARDG-SVFPVYTWCPKEEGQFYPGRVSRW-WLKQS 58
MG N + WFR+ LR+ DNPAL R +V VY P G G ++RW +L Q
Sbjct: 1 MGVN-AVHWFRKGLRLHDNPALRECIRGADTVRCVYILDPWFAGSSNVG-INRWRFLLQC 58
Query: 59 LSYLGQSLKSLGAELVLFKTESTLAALLECISAIKATKVVFNHLYDPVSLVRDHSIKEKL 118
L L +L+ L + L + + + K+ + +P RD +IK+
Sbjct: 59 LEDLDANLRKLNSRLFVIRGQPA-DVFPRLFKEWSIAKLSIEYDSEPFGKERDAAIKKLA 117
Query: 119 VELGISVQSYNGDLLYEPWEIYD-ERGHAFTTFDAYWDKCLQMQ-ME-PASILPPWRLVQ 175
E G+ V LY+ +I + G T+ + +M+ +E P + P + +
Sbjct: 118 SEAGVEVIVRISHTLYDLDKIIELNGGQPPLTYKRFQTLISRMEPLEMPVETITPEVMQK 177
Query: 176 AAGTIDGCSIEDLGLEDESEKS--SNALLGRGWSPGWSNADKVLTEFVEQHLLR--YYKN 231
+ E G+ E ++ L W G + A LT +E+HL R + N
Sbjct: 178 CTTPVSDDHDEKYGVPSLEELGFDTDGLPSAVWPGGETEA---LTR-LERHLERKAWVAN 233
Query: 232 RQKLGGNSTSLL------SPYLHFGELSVRKVFQCLWMKQILWAKEENFEGKESVTFFLR 285
++ N+ SLL SPYL FG LS R +F + K K+ ++ + +
Sbjct: 234 FERPRMNANSLLASPTGLSPYLRFGCLSCR-LF---YFKLTDLYKKVKKNSSPPLSLYGQ 289
Query: 286 AMGLREYSRYLCFNFPFTHERPLLSNLKYFPWHADLGNFKAWRQGRTGYPLVDAGMRELW 345
+ RE+ N P + PW + W +GRTG+P +DA M +L
Sbjct: 290 LLW-REFFYTAATNNPRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLR 348
Query: 346 ATGWIHNRIRVIVSSFAVKV-LLLPWRWGMKYFWDTLLDADLECDILGWQYISGSLPDGH 404
GWIH+ R V+ F + L + W GMK F + LLDAD + W ++S S
Sbjct: 349 QEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSVNAGSWMWLSCS-SFFQ 407
Query: 405 ELERLDSPEIQGSKFDPEGEYVRQWLPELARMPTEWIHHPWDAPPNVLKAAGVELGLNYP 464
+ P G + DP G+Y+R++LP L P ++I+ PW+AP +V KAA +G+NYP
Sbjct: 408 QFFHCYCPVGFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNAPESVQKAAKCVIGVNYP 467
Query: 465 KPIID 469
KP+++
Sbjct: 468 KPMVN 472
>UNIPROTKB|E1C2Z9 [details] [associations]
symbol:CRY1 "Cryptochrome-1" species:9031 "Gallus gallus"
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000988 "protein binding transcription factor activity"
evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0042752 "regulation of circadian rhythm" evidence=IEA]
InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875
GO:GO:0005739 GO:GO:0005634 GO:GO:0007623 GO:GO:0006281
GO:GO:0042752 GO:GO:0000122 GO:GO:0003690 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
GeneTree:ENSGT00500000044813 OMA:FDTDGLP GO:GO:0000988
EMBL:AADN02006287 EMBL:AADN02006288 EMBL:AADN02006289
IPI:IPI00821281 Ensembl:ENSGALT00000037715 ArrayExpress:E1C2Z9
Uniprot:E1C2Z9
Length = 624
Score = 405 (147.6 bits), Expect = 1.9e-35, P = 1.9e-35
Identities = 140/485 (28%), Positives = 220/485 (45%)
Query: 1 MGGNRTIVWFRRDLRIEDNPALAAAARDG-SVFPVYTWCPKEEGQFYPGRVSRW-WLKQS 58
MG N + WFR+ LR+ DNPAL R +V VY P G G ++RW +L Q
Sbjct: 1 MGVN-AVHWFRKGLRLHDNPALRECIRGADTVRCVYILDPWFAGSSNVG-INRWRFLLQC 58
Query: 59 LSYLGQSLKSLGAELVLFKTESTLAALLECISAIKATKVVFNHLYDPVSLVRDHSIKEKL 118
L L +L+ L + L + + + K+ + +P RD +IK+
Sbjct: 59 LEDLDANLRKLNSRLFVIRGQPA-DVFPRLFKEWSIAKLSIEYDSEPFGKERDAAIKKLA 117
Query: 119 VELGISVQSYNGDLLYEPWEIYD-ERGHAFTTFDAYWDKCLQMQ-ME-PASILPPWRLVQ 175
E G+ V LY+ +I + G T+ + +M+ +E P + P + +
Sbjct: 118 SEAGVEVIVRISHTLYDLDKIIELNGGQPPLTYKRFQTLISRMEPLEMPVETITPEVMQK 177
Query: 176 AAGTIDGCSIEDLGLEDESEKS--SNALLGRGWSPGWSNADKVLTEFVEQHLLR--YYKN 231
+ E G+ E ++ L W G + A LT +E+HL R + N
Sbjct: 178 CTTPVSDDHDEKYGVPSLEELGFDTDGLPSAVWPGGETEA---LTR-LERHLERKAWVAN 233
Query: 232 RQKLGGNSTSLL------SPYLHFGELSVRKVFQCLWMKQILWAKEENFEGKESVTFFLR 285
++ N+ SLL SPYL FG LS R +F + K K+ ++ + +
Sbjct: 234 FERPRMNANSLLASPTGLSPYLRFGCLSCR-LF---YFKLTDLYKKVKKNSSPPLSLYGQ 289
Query: 286 AMGLREYSRYLCFNFPFTHERPLLSNLKYFPWHADLGNFKAWRQGRTGYPLVDAGMRELW 345
+ RE+ N P + PW + W +GRTG+P +DA M +L
Sbjct: 290 LLW-REFFYTAATNNPRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLR 348
Query: 346 ATGWIHNRIRVIVSSFAVKV-LLLPWRWGMKYFWDTLLDADLECDILGWQYISGSLPDGH 404
GWIH+ R V+ F + L + W GMK F + LLDAD + W ++S S
Sbjct: 349 QEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSVNAGSWMWLSCS-SFFQ 407
Query: 405 ELERLDSPEIQGSKFDPEGEYVRQWLPELARMPTEWIHHPWDAPPNVLKAAGVELGLNYP 464
+ P G + DP G+Y+R++LP L P ++I+ PW+AP +V KAA +G+NYP
Sbjct: 408 QFFHCYCPVGFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNAPESVQKAAKCVIGVNYP 467
Query: 465 KPIID 469
KP+++
Sbjct: 468 KPMVN 472
>UNIPROTKB|Q8WP19 [details] [associations]
symbol:CRY1 "Cryptochrome-1" species:9541 "Macaca
fascicularis" [GO:0042752 "regulation of circadian rhythm"
evidence=ISS] InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 GO:GO:0005634 GO:GO:0005737
GO:GO:0006355 GO:GO:0000166 GO:GO:0006281 GO:GO:0006351
GO:GO:0042752 GO:GO:0048511 GO:GO:0009881 GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 PROSITE:PS51645 HOVERGEN:HBG053470 EMBL:AB074458
ProteinModelPortal:Q8WP19 Uniprot:Q8WP19
Length = 586
Score = 402 (146.6 bits), Expect = 2.3e-35, P = 2.3e-35
Identities = 144/489 (29%), Positives = 222/489 (45%)
Query: 1 MGGNRTIVWFRRDLRIEDNPALAAAARDGSVFP-VYTWCPKEEGQFYPGRVSRW-WLKQS 58
MG N + WFR+ LR+ DNPAL + VY P G G ++RW +L Q
Sbjct: 1 MGVN-AVHWFRKGLRLHDNPALKECIQGADTIRCVYILDPWFAGSSNVG-INRWRFLLQC 58
Query: 59 LSYLGQSLKSLGAELVLFKTESTLAALLECISAIKATKVVFNHLYDPVSLVRDHSIKEKL 118
L L +L+ L + L + + + TK+ + +P RD +IK+
Sbjct: 59 LEDLDANLRKLNSRLFVIRGQPA-DVFPRLFKEWNITKLSIEYDSEPFGKERDAAIKKLA 117
Query: 119 VELGISVQSYNGDLLYEPWEIYD-ERGHAFTTFDAYWDKCLQMQMEPASILPPWRLVQAA 177
E G+ V LY+ +I + G T+ + + L +MEP I P + +
Sbjct: 118 TEAGVEVIVRISHTLYDLDKIIELNGGQPPLTYKRF--QTLISKMEPLEI--PVETITSE 173
Query: 178 GTIDGCSIEDLGLEDESEK---SSNALLG---RGWSPG-WSNAD-KVLTEFVEQHLLR-- 227
I+ C+ L +D EK S LG G S W + + LT +E+HL R
Sbjct: 174 -VIEKCTTP-LS-DDHDEKYGVPSLEELGFDTDGLSSAVWPGGETEALTR-LERHLERKA 229
Query: 228 YYKNRQKLGGNSTSLL------SPYLHFGELSVRKVFQCLWMKQILWAKEENFEGKESVT 281
+ N ++ N+ SLL SPYL FG LS R +F + K K+ ++
Sbjct: 230 WVANFERPRMNANSLLASPTGLSPYLRFGCLSCR-LF---YFKLTDLYKKVKRNSSPPLS 285
Query: 282 FFLRAMGLREYSRYLCFNFPFTHERPLLSNLKYFPWHADLGNFKAWRQGRTGYPLVDAGM 341
+ + + RE+ N P + PW + W +GRTG+P +DA M
Sbjct: 286 LYGQLLW-REFFYTAATNNPRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIM 344
Query: 342 RELWATGWIHNRIRVIVSSFAVKV-LLLPWRWGMKYFWDTLLDADLECDILGWQYISGSL 400
+L GWIH+ R V+ F + L + W GMK F + LLDAD + W ++S S
Sbjct: 345 TQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLSCS- 403
Query: 401 PDGHELERLDSPEIQGSKFDPEGEYVRQWLPELARMPTEWIHHPWDAPPNVLKAAGVELG 460
+ P G + DP G+Y+R++LP L P ++I+ PW+AP + K A +G
Sbjct: 404 SFFQQFFHCYCPVGFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNAPEGIQKVAKCLIG 463
Query: 461 LNYPKPIID 469
+NYPKP+++
Sbjct: 464 INYPKPMVN 472
>UNIPROTKB|Q16526 [details] [associations]
symbol:CRY1 "Cryptochrome-1" species:9606 "Homo sapiens"
[GO:0006281 "DNA repair" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0018298 "protein-chromophore linkage"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042752 "regulation
of circadian rhythm" evidence=ISS] [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=IDA]
[GO:0003914 "DNA (6-4) photolyase activity" evidence=IDA]
[GO:0009882 "blue light photoreceptor activity" evidence=NAS]
[GO:0003690 "double-stranded DNA binding" evidence=IDA] [GO:0009785
"blue light signaling pathway" evidence=NAS] [GO:0019902
"phosphatase binding" evidence=IPI] [GO:0003677 "DNA binding"
evidence=TAS] [GO:0000988 "protein binding transcription factor
activity" evidence=IDA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394 InterPro:IPR006050
Pfam:PF00875 GO:GO:0005739 GO:GO:0005634 GO:GO:0000166
GO:GO:0007623 GO:GO:0006281 GO:GO:0006351 GO:GO:0042752
GO:GO:0000122 GO:GO:0003690 GO:GO:0018298 Gene3D:3.40.50.620
InterPro:IPR014729 Reactome:REACT_24941 eggNOG:COG0415
HOGENOM:HOG000245622 KO:K02295 GO:GO:0009882 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 CTD:1407
HOVERGEN:HBG053470 EMBL:D84657 EMBL:D83702 EMBL:BC030519
IPI:IPI00002540 RefSeq:NP_004066.1 UniGene:Hs.151573
ProteinModelPortal:Q16526 SMR:Q16526 IntAct:Q16526
MINT:MINT-1437226 STRING:Q16526 PhosphoSite:Q16526 DMDM:74735764
PaxDb:Q16526 PRIDE:Q16526 DNASU:1407 Ensembl:ENST00000008527
GeneID:1407 KEGG:hsa:1407 UCSC:uc001tmi.3 GeneCards:GC12M107385
HGNC:HGNC:2384 HPA:CAB018762 MIM:601933 neXtProt:NX_Q16526
PharmGKB:PA26904 InParanoid:Q16526 OMA:FDTDGLP OrthoDB:EOG4DBTDC
PhylomeDB:Q16526 ChiTaRS:CRY1 GenomeRNAi:1407 NextBio:5753
ArrayExpress:Q16526 Bgee:Q16526 CleanEx:HS_CRY1
Genevestigator:Q16526 GermOnline:ENSG00000008405 GO:GO:0000988
Uniprot:Q16526
Length = 586
Score = 401 (146.2 bits), Expect = 3.0e-35, P = 3.0e-35
Identities = 144/489 (29%), Positives = 222/489 (45%)
Query: 1 MGGNRTIVWFRRDLRIEDNPALAAAARDGSVFP-VYTWCPKEEGQFYPGRVSRW-WLKQS 58
MG N + WFR+ LR+ DNPAL + VY P G G ++RW +L Q
Sbjct: 1 MGVN-AVHWFRKGLRLHDNPALKECIQGADTIRCVYILDPWFAGSSNVG-INRWRFLLQC 58
Query: 59 LSYLGQSLKSLGAELVLFKTESTLAALLECISAIKATKVVFNHLYDPVSLVRDHSIKEKL 118
L L +L+ L + L + + + TK+ + +P RD +IK+
Sbjct: 59 LEDLDANLRKLNSRLFVIRGQPA-DVFPRLFKEWNITKLSIEYDSEPFGKERDAAIKKLA 117
Query: 119 VELGISVQSYNGDLLYEPWEIYD-ERGHAFTTFDAYWDKCLQMQMEPASILPPWRLVQAA 177
E G+ V LY+ +I + G T+ + + L +MEP I P + +
Sbjct: 118 TEAGVEVIVRISHTLYDLDKIIELNGGQPPLTYKRF--QTLISKMEPLEI--PVETITSE 173
Query: 178 GTIDGCSIEDLGLEDESEK---SSNALLG---RGWSPG-WSNAD-KVLTEFVEQHLLR-- 227
I+ C+ L +D EK S LG G S W + + LT +E+HL R
Sbjct: 174 -VIEKCTTP-LS-DDHDEKYGVPSLEELGFDTDGLSSAVWPGGETEALTR-LERHLERKA 229
Query: 228 YYKNRQKLGGNSTSLL------SPYLHFGELSVRKVFQCLWMKQILWAKEENFEGKESVT 281
+ N ++ N+ SLL SPYL FG LS R +F + K K+ ++
Sbjct: 230 WVANFERPRMNANSLLASPTGLSPYLRFGCLSCR-LF---YFKLTDLYKKVKKNSSPPLS 285
Query: 282 FFLRAMGLREYSRYLCFNFPFTHERPLLSNLKYFPWHADLGNFKAWRQGRTGYPLVDAGM 341
+ + + RE+ N P + PW + W +GRTG+P +DA M
Sbjct: 286 LYGQLLW-REFFYTAATNNPRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIM 344
Query: 342 RELWATGWIHNRIRVIVSSFAVKV-LLLPWRWGMKYFWDTLLDADLECDILGWQYISGSL 400
+L GWIH+ R V+ F + L + W GMK F + LLDAD + W ++S S
Sbjct: 345 TQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLSCS- 403
Query: 401 PDGHELERLDSPEIQGSKFDPEGEYVRQWLPELARMPTEWIHHPWDAPPNVLKAAGVELG 460
+ P G + DP G+Y+R++LP L P ++I+ PW+AP + K A +G
Sbjct: 404 SFFQQFFHCYCPVGFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNAPEGIQKVAKCLIG 463
Query: 461 LNYPKPIID 469
+NYPKP+++
Sbjct: 464 VNYPKPMVN 472
>UNIPROTKB|Q70AD6 [details] [associations]
symbol:CRY1 "Cryptochrome-1" species:134510 "Nannospalax
judaei" [GO:0042752 "regulation of circadian rhythm" evidence=ISS]
InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394 InterPro:IPR006050
Pfam:PF00875 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0000166 GO:GO:0006281 GO:GO:0006351 GO:GO:0042752
GO:GO:0048511 GO:GO:0009881 GO:GO:0018298 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
PROSITE:PS51645 HOVERGEN:HBG053470 EMBL:AJ606298
ProteinModelPortal:Q70AD6 Uniprot:Q70AD6
Length = 587
Score = 401 (146.2 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 144/489 (29%), Positives = 222/489 (45%)
Query: 1 MGGNRTIVWFRRDLRIEDNPALAAAARDGSVFP-VYTWCPKEEGQFYPGRVSRW-WLKQS 58
MG N + WFR+ LR+ DNPAL + VY P G G ++RW +L Q
Sbjct: 1 MGVN-AVHWFRKGLRLHDNPALKECIQGADTIRCVYILDPWFAGSSNVG-INRWRFLLQC 58
Query: 59 LSYLGQSLKSLGAELVLFKTESTLAALLECISAIKATKVVFNHLYDPVSLVRDHSIKEKL 118
L L +L+ L + L++ + + TK+ + +P RD +IK+
Sbjct: 59 LEDLDANLRKLNSRLLVIRGQPA-DVFPRLFKEWNITKLSIEYDSEPFGKERDAAIKKLA 117
Query: 119 VELGISVQSYNGDLLYEPWEIYD-ERGHAFTTFDAYWDKCLQMQMEPASILPPWRLVQAA 177
E G+ V LY+ +I + G T+ + + L +MEP I P + +
Sbjct: 118 TEAGVEVIVRISHTLYDLDKIIELNGGQPPLTYKRF--QTLISKMEPLEI--PVETITSE 173
Query: 178 GTIDGCSIEDLGLEDESEK---SSNALLG---RGWSPG-WSNAD-KVLTEFVEQHLLR-- 227
I+ C+ L +D EK S LG G S W + + LT +E+HL R
Sbjct: 174 -VIEKCTTP-LS-DDHDEKYGVPSLEELGFDTDGLSSAVWPGGETEALTR-LERHLERRA 229
Query: 228 YYKNRQKLGGNSTSLL------SPYLHFGELSVRKVFQCLWMKQILWAKEENFEGKESVT 281
+ N ++ N+ SLL SPYL FG LS R +F + K K+ ++
Sbjct: 230 WVANFERPRMNANSLLASPTGLSPYLRFGCLSCR-LF---YFKLTDLYKKVKKNSSPPLS 285
Query: 282 FFLRAMGLREYSRYLCFNFPFTHERPLLSNLKYFPWHADLGNFKAWRQGRTGYPLVDAGM 341
+ + + RE+ N P + PW + W +GRTG+P +DA M
Sbjct: 286 LYGQLLW-REFFYTAATNNPRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIM 344
Query: 342 RELWATGWIHNRIRVIVSSFAV-KVLLLPWRWGMKYFWDTLLDADLECDILGWQYISGSL 400
+L GWIH+ R V+ F L + W GMK F + LLDAD + W ++S S
Sbjct: 345 TQLRQEGWIHHLARHAVACFLTGSDLWISWEEGMKVFEELLLDADWSINAGSWMWLSCS- 403
Query: 401 PDGHELERLDSPEIQGSKFDPEGEYVRQWLPELARMPTEWIHHPWDAPPNVLKAAGVELG 460
+ P G + DP G+Y+R++LP L P ++I+ PW+AP + K A +G
Sbjct: 404 SFFQQFFHCYCPVGFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNAPEGIQKVAKCLIG 463
Query: 461 LNYPKPIID 469
+NYPKP+++
Sbjct: 464 VNYPKPMVN 472
>UNIPROTKB|F1P5X2 [details] [associations]
symbol:LOC395100 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 GO:GO:0006281
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 GeneTree:ENSGT00500000044813 EMBL:AADN02063941
IPI:IPI00821352 Ensembl:ENSGALT00000040673 OMA:WTASEEE
ArrayExpress:F1P5X2 Uniprot:F1P5X2
Length = 547
Score = 394 (143.8 bits), Expect = 5.1e-35, P = 5.1e-35
Identities = 143/486 (29%), Positives = 225/486 (46%)
Query: 4 NRTIVWFRRDLRIEDNPALAAAARDGSV-FPVYTWCPK-EEGQFYPGRVSRW-WLKQSLS 60
+RTI FR+ LR+ DNPAL AA + V +PVY + G + RW +L QSL
Sbjct: 21 HRTIHLFRKGLRLHDNPALLAALQSSEVVYPVYILDRAFMTSSMHIGAL-RWHFLLQSLE 79
Query: 61 YLGQSLKSLGAELVLFKTESTLAALLECISAIKATKVVFNHLYDPVSLVRDHSIKEKLVE 120
L SL+ LG+ L++ + E + + + + T+V + +P + +I+ E
Sbjct: 80 DLRSSLRQLGSCLLVIQGEYE-SVVRDHVQKWNITQVTLDAEMEPFYKEMEANIRGLGEE 138
Query: 121 LGISVQSYNGDLLYEPWEIYDERGHAFT-TFDAYWDKCLQMQMEPASILPPWRLVQAAGT 179
LG V S G LY I + G T+ + + L + +P P R A
Sbjct: 139 LGFQVLSLMGHSLYNTQRILELNGGTPPLTYKRFL-RILSLLGDPEV---PVRN-PTAED 193
Query: 180 IDGCSIEDLGLED---ESEKSSNALLGRGWSPGWSNADKVLTEFVEQHL-----LRYYKN 231
CS +LGL + + + SP W + + +EQHL + +
Sbjct: 194 FQRCSPPELGLAECYGVPLPTDLKIPPESISP-WRGGESEGLQRLEQHLADQGWVASFTK 252
Query: 232 RQKLGGN---STSLLSPYLHFGELSVRKVFQCLWMKQILWAKEENFEGKESVTFFLRAMG 288
+ + + ST+ LSPY G LSVR F L ++A+ ++ V+ L+
Sbjct: 253 PKTVPNSLLPSTTGLSPYFSTGCLSVRSFFYRL---SNIYAQAKH-HSLPPVS--LQGQL 306
Query: 289 L-REYSRYLCFNFP-FTHE--RPLLSNLKYFPWHADLGNFKAWRQGRTGYPLVDAGMREL 344
L RE+ + P FT P+ ++ W+ D W+ +TG+P +DA M +L
Sbjct: 307 LWREFFYTVASATPNFTKMAGNPICLQIR---WYEDAERLHKWKTAQTGFPWIDAIMTQL 363
Query: 345 WATGWIHNRIRVIVSSFAVKV-LLLPWRWGMKYFWDTLLDADLECDILGWQYISGSLPDG 403
GWIH+ R + F + L + W GMK F + LLDAD + W ++S S
Sbjct: 364 RQEGWIHHLARHAAACFLTRGDLWISWEEGMKVFEELLLDADYSINAGNWMWLSASA-FF 422
Query: 404 HELERLDSPEIQGSKFDPEGEYVRQWLPELARMPTEWIHHPWDAPPNVLKAAGVELGLNY 463
H R+ P G + DPEG+Y+R++LP L P+++I+ PW A K AG +G +Y
Sbjct: 423 HHYTRIFCPVRFGRRTDPEGQYIRKYLPILKNFPSKYIYEPWTASEEEQKQAGCIIGRDY 482
Query: 464 PKPIID 469
P P++D
Sbjct: 483 PFPMVD 488
>UNIPROTKB|E2RMX4 [details] [associations]
symbol:CRY1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042752 "regulation of circadian rhythm"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0007623 "circadian rhythm" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003690 "double-stranded DNA binding" evidence=IEA] [GO:0000988
"protein binding transcription factor activity" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0003913 "DNA photolyase activity" evidence=IEA]
InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875
GO:GO:0005739 GO:GO:0005634 GO:GO:0007623 GO:GO:0006281
GO:GO:0042752 GO:GO:0000122 GO:GO:0003690 Gene3D:3.40.50.620
InterPro:IPR014729 KO:K02295 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 CTD:1407 GeneTree:ENSGT00500000044813 OMA:FDTDGLP
GO:GO:0000988 EMBL:AAEX03007373 EMBL:AAEX03007371 EMBL:AAEX03007372
RefSeq:XP_862753.1 Ensembl:ENSCAFT00000002826 GeneID:474528
KEGG:cfa:474528 Uniprot:E2RMX4
Length = 587
Score = 397 (144.8 bits), Expect = 9.5e-35, P = 9.5e-35
Identities = 141/489 (28%), Positives = 221/489 (45%)
Query: 1 MGGNRTIVWFRRDLRIEDNPALAAAARDGSVFP-VYTWCPKEEGQFYPGRVSRW-WLKQS 58
MG N + WFR+ LR+ DNPAL + VY P G G ++RW +L Q
Sbjct: 1 MGVN-AVHWFRKGLRLHDNPALKECIQGADTIRCVYILDPWFAGSSNVG-INRWRFLLQC 58
Query: 59 LSYLGQSLKSLGAELVLFKTESTLAALLECISAIKATKVVFNHLYDPVSLVRDHSIKEKL 118
L L +L+ L + L + + + TK+ + +P RD +IK+
Sbjct: 59 LEDLDANLRKLNSRLFVIRGQPA-DVFPRLFKEWNITKLSIEYDSEPFGKERDAAIKKLA 117
Query: 119 VELGISVQSYNGDLLYEPWEIYD-ERGHAFTTFDAYWDKCLQMQMEPASILPPWRLVQAA 177
E G+ V LY+ +I + G T+ + + L +MEP I P + +
Sbjct: 118 TEAGVEVIVRISHTLYDLDKIIELNGGQPPLTYKRF--QTLISKMEPLEI--PVETITSE 173
Query: 178 GTIDGCSIEDLGLEDESEKSSNALLGR-GWS----PG--WSNAD-KVLTEFVEQHLLR-- 227
++ C+ L +D EK L G+ P W + + LT +E+HL R
Sbjct: 174 -VVEKCTTP-LS-DDHDEKYGVPSLEELGFDTDGLPSAVWPGGETEALTR-LERHLERKA 229
Query: 228 YYKNRQKLGGNSTSLL------SPYLHFGELSVRKVFQCLWMKQILWAKEENFEGKESVT 281
+ N ++ N+ SLL SPYL FG LS R +F + K K+ ++
Sbjct: 230 WVANFERPRMNANSLLASPTGLSPYLRFGCLSCR-LF---YFKLTDLYKKVKKNSSPPLS 285
Query: 282 FFLRAMGLREYSRYLCFNFPFTHERPLLSNLKYFPWHADLGNFKAWRQGRTGYPLVDAGM 341
+ + + RE+ N P + PW + W +GRTG+P +DA M
Sbjct: 286 LYGQLLW-REFFYTAATNNPRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIM 344
Query: 342 RELWATGWIHNRIRVIVSSFAVKV-LLLPWRWGMKYFWDTLLDADLECDILGWQYISGSL 400
+L GWIH+ R V+ F + L + W GMK F + LLDAD + W ++S S
Sbjct: 345 TQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLSCS- 403
Query: 401 PDGHELERLDSPEIQGSKFDPEGEYVRQWLPELARMPTEWIHHPWDAPPNVLKAAGVELG 460
+ P G + DP G+Y+R++LP L P ++I+ PW+AP + K A +G
Sbjct: 404 SFFQQFFHCYCPVGFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNAPEGIQKVAKCLIG 463
Query: 461 LNYPKPIID 469
+NYPKP+++
Sbjct: 464 VNYPKPMVN 472
>UNIPROTKB|Q7PYI7 [details] [associations]
symbol:Cry1 "Cryptochrome-1" species:7165 "Anopheles
gambiae" [GO:0000060 "protein import into nucleus, translocation"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005641
"nuclear envelope lumen" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0009785 "blue light signaling pathway"
evidence=ISS] [GO:0009882 "blue light photoreceptor activity"
evidence=ISS] [GO:0042752 "regulation of circadian rhythm"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0050660 "flavin adenine
dinucleotide binding" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147
PROSITE:PS00394 InterPro:IPR006050 Pfam:PF00875 GO:GO:0005737
GO:GO:0048471 GO:GO:0045892 GO:GO:0050660 GO:GO:0006281
GO:GO:0006351 GO:GO:0005641 GO:GO:0042752 GO:GO:0048511
GO:GO:0000060 EMBL:AAAB01008987 GO:GO:0018298 Gene3D:3.40.50.620
InterPro:IPR014729 eggNOG:COG0415 HOGENOM:HOG000245622 KO:K02295
OMA:QMFLHTV OrthoDB:EOG437PW2 GO:GO:0009882 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 EMBL:DQ219482
RefSeq:XP_321104.4 ProteinModelPortal:Q7PYI7 STRING:Q7PYI7
EnsemblMetazoa:AGAP001958-RA GeneID:1281165
KEGG:aga:AgaP_AGAP001958 VectorBase:AGAP001958 CTD:1281165
InParanoid:Q0QW08 PhylomeDB:Q7PYI7 Uniprot:Q7PYI7
Length = 545
Score = 323 (118.8 bits), Expect = 9.9e-35, Sum P(3) = 9.9e-35
Identities = 81/248 (32%), Positives = 130/248 (52%)
Query: 237 GNSTSLLSPYLHFGELSVRKVFQCLWMKQILWAK-EENFEGKESVTFFLRAMGL-REYSR 294
G +TS+ S L FG LSVR + C+ L+AK + N + K + + REY
Sbjct: 261 GPATSM-SAALRFGCLSVRMFYWCV---HDLFAKVQSNSQFKYPGGHHITGQLIWREYFY 316
Query: 295 YLCFNFPFTHE---RPLLSNLKYFPWHA-DLGNFKAWRQGRTGYPLVDAGMRELWATGWI 350
+ P E P+ N+ PW+ + + W++GRTG+P++DA MR+L A GW+
Sbjct: 317 TMSVQNPHYGEMERNPICLNI---PWYKPEDDSLTRWKEGRTGFPMIDAAMRQLLAEGWL 373
Query: 351 HNRIRVIVSSFAVKV-LLLPWRWGMKYFWDTLLDADLECDILGWQYISGSLPDGH-ELER 408
H+ +R I ++F + L L W G+++F LLDAD W ++S S + + +
Sbjct: 374 HHILRNITATFLTRGGLWLSWEEGLQHFLKYLLDADWSVCAGNWMWVSSSAFERLLDSSK 433
Query: 409 LDSPEIQGSKFDPEGEYVRQWLPELARMPTEWIHHPWDAPPNVLKAAGVELGLNYPKPII 468
P + DP+G+YV+++LPELA P +++H PW A G +G YP P++
Sbjct: 434 CTCPIALARRLDPKGDYVKRYLPELANYPAQFVHEPWKASREQQIEYGCVIGEKYPAPMV 493
Query: 469 DLDLGRER 476
DL + +R
Sbjct: 494 DLAIVSKR 501
Score = 118 (46.6 bits), Expect = 9.9e-35, Sum P(3) = 9.9e-35
Identities = 34/147 (23%), Positives = 65/147 (44%)
Query: 7 IVWFRRDLRIEDNPALAAAARDGSV---------FPVYTWCPKEEGQFYPGRVSRWWLKQ 57
I+WFR LR+ DNP+L A + V FP++ + + G G +L +
Sbjct: 6 ILWFRHGLRLHDNPSLLEALKSDCVNQSSEAVKLFPIFIFDGESAGTRIVGYNRMKFLLE 65
Query: 58 SLSYLGQSLKSLGAELVLFKTESTLAALLECISAIKATKVVFNHLYDPVSLVRDHSIKEK 117
SL+ L + + LG +L++F+ +S + L + K+ + +P+ RD ++ +
Sbjct: 66 SLADLDRQFRDLGGQLLVFRGDS-VTVLRRLFEELNIKKLCYEQDCEPIWKERDDAVAKL 124
Query: 118 LVELGISVQSYNGDLLYEPWEIYDERG 144
+ + L+ P E+ G
Sbjct: 125 CRTMDVRCVENVSHTLWNPIEVIQTNG 151
Score = 41 (19.5 bits), Expect = 9.9e-35, Sum P(3) = 9.9e-35
Identities = 13/54 (24%), Positives = 27/54 (50%)
Query: 508 DRIQTPAIPQVVLREKSTCPTISSNDQKVPSFQNGKNNLPSRKRPKNVEEERQY 561
++ P + ++ K T++S +K+ +G + P RP ++EE RQ+
Sbjct: 486 EKYPAPMVDLAIV-SKRNAHTMASLREKLV---DG-GSTPPHCRPSDIEEIRQF 534
>ZFIN|ZDB-GENE-010426-3 [details] [associations]
symbol:cry1b "cryptochrome 1b" species:7955 "Danio
rerio" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 ZFIN:ZDB-GENE-010426-3
GO:GO:0006281 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 HOVERGEN:HBG053470 EMBL:AB042249
IPI:IPI00863245 UniGene:Dr.158985 ProteinModelPortal:Q9I916
STRING:Q9I916 ArrayExpress:Q9I916 Uniprot:Q9I916
Length = 606
Score = 398 (145.2 bits), Expect = 1.0e-34, P = 1.0e-34
Identities = 140/486 (28%), Positives = 229/486 (47%)
Query: 6 TIVWFRRDLRIEDNPALAAAARDG-SVFPVYTWCPKEEGQFYPGRVSRW-WLKQSLSYLG 63
T+ WFR+ LR+ DNP+L + + ++ VY P G G +SRW +L Q L L
Sbjct: 5 TVHWFRKGLRLHDNPSLRDSIKGADNLRCVYILDPWFAGSSNVG-ISRWRFLLQCLEDLD 63
Query: 64 QSLKSLGAELVLFKTESTLAALLECISAIKATKVVFNHLYDPVSLVRDHSIKEKLVELGI 123
SL+ L + L + + + T K +++ + + +P RD +I++ E G+
Sbjct: 64 ASLRKLNSRLFVIRGQPT-DVFPRLFKEWKISRLSYEYDSEPFGKDRDAAIRKLATEAGV 122
Query: 124 SVQSYNGDLLYEPWEIYD-ERGHAFTTFDAYWDKCLQMQ-ME-PASILPPWRLVQAAGTI 180
V LY+ +I + G + T+ + +M +E PA + + + + +
Sbjct: 123 EVFVRISHTLYDLDKIIEFNGGQSPLTYKRFQTLISRMDPVEMPAETITAEIMGKCSTPV 182
Query: 181 D-------GC-SIEDLGLEDESEKSSNALLGRGWSPGWSNADKVLTEFVEQHLLR--YYK 230
G S+E+LG E E S A+ W G + A LT +E+HL R +
Sbjct: 183 SDDHDNKFGVPSLEELGFETEG--LSTAV----WPGGETEA---LTR-LERHLERKAWVA 232
Query: 231 NRQKLGGNSTSLL------SPYLHFGELSVRKVFQCLWMKQILWAKEENFEGKESVTFFL 284
N ++ N+ SLL SPYL FG LS R + L L+ K + S++ +
Sbjct: 233 NFERPRMNANSLLASPTGLSPYLRFGCLSCRLFYFKL---TDLYRKVKK-NSTPSLSLYG 288
Query: 285 RAMGLREYSRYLCFNFPFTHERPLLSNLKYFPWHADLGNFKAWRQGRTGYPLVDAGMREL 344
+ + RE+ N P + PW + W +G+TG+P +DA M +L
Sbjct: 289 QLLW-REFFYTAATNNPHFDKMEFNPICVQIPWDRNPEALAKWAEGQTGFPWIDAIMTQL 347
Query: 345 WATGWIHNRIRVIVSSFAVKV-LLLPWRWGMKYFWDTLLDADLECDILGWQYISGSLPDG 403
GWIH+ R V+ F + L + W GMK F + LLDAD + W ++S S
Sbjct: 348 RQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSVNAGSWMWLSCS-SFF 406
Query: 404 HELERLDSPEIQGSKFDPEGEYVRQWLPELARMPTEWIHHPWDAPPNVLKAAGVELGLNY 463
+ P G + DP G+Y+R++LP L P ++I+ PW+AP +V K A +G++Y
Sbjct: 407 QQFFHCYCPVGFGRRTDPNGDYIRRYLPILRGFPAKFIYDPWNAPESVQKVAKCIIGVHY 466
Query: 464 PKPIID 469
PKP+++
Sbjct: 467 PKPMVN 472
>RGD|735083 [details] [associations]
symbol:Cry1 "cryptochrome 1 (photolyase-like)" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000988 "protein
binding transcription factor activity" evidence=IEA;ISO]
[GO:0003690 "double-stranded DNA binding" evidence=IEA;ISO]
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007623 "circadian rhythm" evidence=IEA;ISO] [GO:0009881
"photoreceptor activity" evidence=IEA] [GO:0018298
"protein-chromophore linkage" evidence=IEA] [GO:0019901 "protein
kinase binding" evidence=IEA;ISO] [GO:0019902 "phosphatase binding"
evidence=ISO] [GO:0042752 "regulation of circadian rhythm"
evidence=ISO;ISS] [GO:0003904 "deoxyribodipyrimidine photo-lyase
activity" evidence=ISO] [GO:0003914 "DNA (6-4) photolyase activity"
evidence=ISO] InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 RGD:735083 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GO:GO:0000166 GO:GO:0006281
GO:GO:0006351 GO:GO:0042752 GO:GO:0048511 GO:GO:0009881
GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
HOGENOM:HOG000245622 KO:K02295 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 PROSITE:PS51645 CTD:1407 HOVERGEN:HBG053470
GeneTree:ENSGT00500000044813 EMBL:AF545855 EMBL:BC107677
IPI:IPI00395230 RefSeq:NP_942045.2 UniGene:Rn.43646
ProteinModelPortal:Q32Q86 STRING:Q32Q86 PhosphoSite:Q32Q86
PRIDE:Q32Q86 Ensembl:ENSRNOT00000009124 GeneID:299691
KEGG:rno:299691 UCSC:RGD:735083 NextBio:645641 ArrayExpress:Q32Q86
Genevestigator:Q32Q86 GermOnline:ENSRNOG00000006622 Uniprot:Q32Q86
Length = 588
Score = 396 (144.5 bits), Expect = 1.3e-34, P = 1.3e-34
Identities = 137/486 (28%), Positives = 215/486 (44%)
Query: 1 MGGNRTIVWFRRDLRIEDNPALAAAARDGSVFP-VYTWCPKEEGQFYPGRVSRW-WLKQS 58
MG N + WFR+ LR+ DNPAL + VY P G G ++RW +L Q
Sbjct: 1 MGVN-AVHWFRKGLRLHDNPALKECIQGADTIRCVYILDPWFAGSSNVG-INRWRFLLQC 58
Query: 59 LSYLGQSLKSLGAELVLFKTESTLAALLECISAIKATKVVFNHLYDPVSLVRDHSIKEKL 118
L L +L+ L + L + + + TK+ + +P RD +IK+
Sbjct: 59 LEDLDANLRKLNSRLFVIRGQPA-DVFPRLFKEWNITKLSIEYDSEPFGKERDAAIKKLA 117
Query: 119 VELGISVQSYNGDLLYEPWEIYDERGH----AFTTFDAYWDKCLQMQMEPASILPPWRLV 174
E G+ V LY+ +I + G + F K ++M PA + +
Sbjct: 118 TEAGVEVIVRISHTLYDLDKIIELNGGQPPLTYKRFQTLVSKMEPLEM-PADTITSDVIG 176
Query: 175 QAAGTIDGCSIEDLGLEDESEKS--SNALLGRGWSPGWSNADKVLTEFVEQHLLR--YYK 230
+ + E G+ E ++ L W G + A LT +E+HL R +
Sbjct: 177 KCTTPLSDDHDEKYGVPSLEELGFDTDGLSSAVWPGGETEA---LTR-LERHLERKAWVA 232
Query: 231 NRQKLGGNSTSLL------SPYLHFGELSVRKVFQCLWMKQILWAKEENFEGKESVTFFL 284
N ++ N+ SLL SPYL FG LS R +F + K K+ ++ +
Sbjct: 233 NFERPRMNANSLLASPTGLSPYLRFGCLSCR-LF---YFKLTDLYKKVKKNSSPPLSLYG 288
Query: 285 RAMGLREYSRYLCFNFPFTHERPLLSNLKYFPWHADLGNFKAWRQGRTGYPLVDAGMREL 344
+ + RE+ N P + PW + W +GRTG+P +DA M +L
Sbjct: 289 QLLW-REFFYTAATNNPRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQL 347
Query: 345 WATGWIHNRIRVIVSSFAVKV-LLLPWRWGMKYFWDTLLDADLECDILGWQYISGSLPDG 403
GWIH+ R V+ F + L + W GMK F + LLDAD + W ++S S
Sbjct: 348 RQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLSCS-SFF 406
Query: 404 HELERLDSPEIQGSKFDPEGEYVRQWLPELARMPTEWIHHPWDAPPNVLKAAGVELGLNY 463
+ P G + DP G+Y+R++LP L P ++I+ PW+AP + K A +G+NY
Sbjct: 407 QQFFHCYCPVGFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNAPEGIQKVAKCLIGVNY 466
Query: 464 PKPIID 469
PKP+++
Sbjct: 467 PKPMVN 472
>UNIPROTKB|Q32Q86 [details] [associations]
symbol:Cry1 "Cryptochrome-1" species:10116 "Rattus
norvegicus" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 PROSITE:PS00394 InterPro:IPR006050 Pfam:PF00875
RGD:735083 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0000166
GO:GO:0006281 GO:GO:0006351 GO:GO:0042752 GO:GO:0048511
GO:GO:0009881 GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729
eggNOG:COG0415 HOGENOM:HOG000245622 KO:K02295 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 CTD:1407
HOVERGEN:HBG053470 GeneTree:ENSGT00500000044813 EMBL:AF545855
EMBL:BC107677 IPI:IPI00395230 RefSeq:NP_942045.2 UniGene:Rn.43646
ProteinModelPortal:Q32Q86 STRING:Q32Q86 PhosphoSite:Q32Q86
PRIDE:Q32Q86 Ensembl:ENSRNOT00000009124 GeneID:299691
KEGG:rno:299691 UCSC:RGD:735083 NextBio:645641 ArrayExpress:Q32Q86
Genevestigator:Q32Q86 GermOnline:ENSRNOG00000006622 Uniprot:Q32Q86
Length = 588
Score = 396 (144.5 bits), Expect = 1.3e-34, P = 1.3e-34
Identities = 137/486 (28%), Positives = 215/486 (44%)
Query: 1 MGGNRTIVWFRRDLRIEDNPALAAAARDGSVFP-VYTWCPKEEGQFYPGRVSRW-WLKQS 58
MG N + WFR+ LR+ DNPAL + VY P G G ++RW +L Q
Sbjct: 1 MGVN-AVHWFRKGLRLHDNPALKECIQGADTIRCVYILDPWFAGSSNVG-INRWRFLLQC 58
Query: 59 LSYLGQSLKSLGAELVLFKTESTLAALLECISAIKATKVVFNHLYDPVSLVRDHSIKEKL 118
L L +L+ L + L + + + TK+ + +P RD +IK+
Sbjct: 59 LEDLDANLRKLNSRLFVIRGQPA-DVFPRLFKEWNITKLSIEYDSEPFGKERDAAIKKLA 117
Query: 119 VELGISVQSYNGDLLYEPWEIYDERGH----AFTTFDAYWDKCLQMQMEPASILPPWRLV 174
E G+ V LY+ +I + G + F K ++M PA + +
Sbjct: 118 TEAGVEVIVRISHTLYDLDKIIELNGGQPPLTYKRFQTLVSKMEPLEM-PADTITSDVIG 176
Query: 175 QAAGTIDGCSIEDLGLEDESEKS--SNALLGRGWSPGWSNADKVLTEFVEQHLLR--YYK 230
+ + E G+ E ++ L W G + A LT +E+HL R +
Sbjct: 177 KCTTPLSDDHDEKYGVPSLEELGFDTDGLSSAVWPGGETEA---LTR-LERHLERKAWVA 232
Query: 231 NRQKLGGNSTSLL------SPYLHFGELSVRKVFQCLWMKQILWAKEENFEGKESVTFFL 284
N ++ N+ SLL SPYL FG LS R +F + K K+ ++ +
Sbjct: 233 NFERPRMNANSLLASPTGLSPYLRFGCLSCR-LF---YFKLTDLYKKVKKNSSPPLSLYG 288
Query: 285 RAMGLREYSRYLCFNFPFTHERPLLSNLKYFPWHADLGNFKAWRQGRTGYPLVDAGMREL 344
+ + RE+ N P + PW + W +GRTG+P +DA M +L
Sbjct: 289 QLLW-REFFYTAATNNPRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQL 347
Query: 345 WATGWIHNRIRVIVSSFAVKV-LLLPWRWGMKYFWDTLLDADLECDILGWQYISGSLPDG 403
GWIH+ R V+ F + L + W GMK F + LLDAD + W ++S S
Sbjct: 348 RQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLSCS-SFF 406
Query: 404 HELERLDSPEIQGSKFDPEGEYVRQWLPELARMPTEWIHHPWDAPPNVLKAAGVELGLNY 463
+ P G + DP G+Y+R++LP L P ++I+ PW+AP + K A +G+NY
Sbjct: 407 QQFFHCYCPVGFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNAPEGIQKVAKCLIGVNY 466
Query: 464 PKPIID 469
PKP+++
Sbjct: 467 PKPMVN 472
>MGI|MGI:1270841 [details] [associations]
symbol:Cry1 "cryptochrome 1 (photolyase-like)" species:10090
"Mus musculus" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0000988 "protein binding
transcription factor activity" evidence=ISO] [GO:0003690
"double-stranded DNA binding" evidence=ISO;IDA] [GO:0003913 "DNA
photolyase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007623 "circadian
rhythm" evidence=IDA;IMP] [GO:0009881 "photoreceptor activity"
evidence=IEA] [GO:0018298 "protein-chromophore linkage"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IPI]
[GO:0019902 "phosphatase binding" evidence=ISO] [GO:0042752
"regulation of circadian rhythm" evidence=IMP] [GO:0048511
"rhythmic process" evidence=IEA] [GO:0050896 "response to stimulus"
evidence=IEA] InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 MGI:MGI:1270841 GO:GO:0005829
GO:GO:0005739 GO:GO:0005654 GO:GO:0000166 GO:GO:0007623
GO:GO:0006281 GO:GO:0006351 GO:GO:0042752 GO:GO:0000122
GO:GO:0003690 GO:GO:0009881 GO:GO:0018298 Gene3D:3.40.50.620
InterPro:IPR014729 Reactome:REACT_109335 Reactome:REACT_24972
eggNOG:COG0415 HOGENOM:HOG000245622 KO:K02295 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 CTD:1407
HOVERGEN:HBG053470 GeneTree:ENSGT00500000044813 OMA:FDTDGLP
OrthoDB:EOG4DBTDC GO:GO:0000988 EMBL:AB000777 EMBL:AF156986
EMBL:AK162460 EMBL:BC022174 EMBL:BC085499 IPI:IPI00129123
RefSeq:NP_031797.1 UniGene:Mm.26237 ProteinModelPortal:P97784
SMR:P97784 DIP:DIP-38515N IntAct:P97784 STRING:P97784
PhosphoSite:P97784 PRIDE:P97784 Ensembl:ENSMUST00000020227
GeneID:12952 KEGG:mmu:12952 UCSC:uc007gle.1 InParanoid:P97784
NextBio:282662 Bgee:P97784 CleanEx:MM_CRY1 Genevestigator:P97784
GermOnline:ENSMUSG00000020038 Uniprot:P97784
Length = 606
Score = 395 (144.1 bits), Expect = 2.3e-34, P = 2.3e-34
Identities = 137/486 (28%), Positives = 215/486 (44%)
Query: 1 MGGNRTIVWFRRDLRIEDNPALAAAARDGSVFP-VYTWCPKEEGQFYPGRVSRW-WLKQS 58
MG N + WFR+ LR+ DNPAL + VY P G G ++RW +L Q
Sbjct: 1 MGVN-AVHWFRKGLRLHDNPALKECIQGADTIRCVYILDPWFAGSSNVG-INRWRFLLQC 58
Query: 59 LSYLGQSLKSLGAELVLFKTESTLAALLECISAIKATKVVFNHLYDPVSLVRDHSIKEKL 118
L L +L+ L + L + + + TK+ + +P RD +IK+
Sbjct: 59 LEDLDANLRKLNSRLFVIRGQPA-DVFPRLFKEWNITKLSIEYDSEPFGKERDAAIKKLA 117
Query: 119 VELGISVQSYNGDLLYEPWEIYDERGH----AFTTFDAYWDKCLQMQMEPASILPPWRLV 174
E G+ V LY+ +I + G + F K ++M PA + +
Sbjct: 118 TEAGVEVIVRISHTLYDLDKIIELNGGQPPLTYKRFQTLVSKMEPLEM-PADTITSDVIG 176
Query: 175 QAAGTIDGCSIEDLGLEDESEKS--SNALLGRGWSPGWSNADKVLTEFVEQHLLR--YYK 230
+ + E G+ E ++ L W G + A LT +E+HL R +
Sbjct: 177 KCMTPLSDDHDEKYGVPSLEELGFDTDGLSSAVWPGGETEA---LTR-LERHLERKAWVA 232
Query: 231 NRQKLGGNSTSLL------SPYLHFGELSVRKVFQCLWMKQILWAKEENFEGKESVTFFL 284
N ++ N+ SLL SPYL FG LS R +F + K K+ ++ +
Sbjct: 233 NFERPRMNANSLLASPTGLSPYLRFGCLSCR-LF---YFKLTDLYKKVKKNSSPPLSLYG 288
Query: 285 RAMGLREYSRYLCFNFPFTHERPLLSNLKYFPWHADLGNFKAWRQGRTGYPLVDAGMREL 344
+ + RE+ N P + PW + W +GRTG+P +DA M +L
Sbjct: 289 QLLW-REFFYTAATNNPRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQL 347
Query: 345 WATGWIHNRIRVIVSSFAVKV-LLLPWRWGMKYFWDTLLDADLECDILGWQYISGSLPDG 403
GWIH+ R V+ F + L + W GMK F + LLDAD + W ++S S
Sbjct: 348 RQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLSCS-SFF 406
Query: 404 HELERLDSPEIQGSKFDPEGEYVRQWLPELARMPTEWIHHPWDAPPNVLKAAGVELGLNY 463
+ P G + DP G+Y+R++LP L P ++I+ PW+AP + K A +G+NY
Sbjct: 407 QQFFHCYCPVGFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNAPEGIQKVAKCLIGVNY 466
Query: 464 PKPIID 469
PKP+++
Sbjct: 467 PKPMVN 472
>ZFIN|ZDB-GENE-010426-4 [details] [associations]
symbol:cry2a "cryptochrome 2a" species:7955 "Danio
rerio" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0009266 "response to
temperature stimulus" evidence=IDA] [GO:0009416 "response to light
stimulus" evidence=IDA] InterPro:IPR005101 Pfam:PF03441
InterPro:IPR006050 Pfam:PF00875 ZFIN:ZDB-GENE-010426-4
GO:GO:0006281 GO:GO:0009416 Gene3D:3.40.50.620 InterPro:IPR014729
GO:GO:0009266 EMBL:BX927144 eggNOG:COG0415 HOGENOM:HOG000245622
GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173 HOVERGEN:HBG053470
GeneTree:ENSGT00500000044813 OrthoDB:EOG4DBTDC EMBL:BX784023
IPI:IPI00501773 UniGene:Dr.116325 Ensembl:ENSDART00000100222
Uniprot:B0S7X5
Length = 659
Score = 395 (144.1 bits), Expect = 4.1e-34, P = 4.1e-34
Identities = 140/486 (28%), Positives = 225/486 (46%)
Query: 6 TIVWFRRDLRIEDNPALAAAARDG-SVFPVYTWCPKEEGQFYPGRVSRW-WLKQSLSYLG 63
+I WFR+ LR+ DNPAL A R +V VY P G G V+RW +L Q L L
Sbjct: 5 SIHWFRKGLRLHDNPALQEAVRGADTVRCVYFLDPWFAGSSNLG-VNRWRFLLQCLDDLD 63
Query: 64 QSLKSLGAELVLFKTESTLAALLECISAIKATKVVFNHLYDPVSLVRDHSIKEKLVELGI 123
+L+ L + L + + + K +++ F + +P RD +IK+ +E G+
Sbjct: 64 SNLRKLNSRLFVVRGQPA-NVFPRLFKEWKISRLTFEYDSEPFGKERDAAIKKLAMEAGV 122
Query: 124 SVQSYNGDLLYEPWEIYD-ERGHAFTTFDAYWDKCLQMQMEPASILPPWRLVQAAGTIDG 182
V LY +I + G T+ + + L +M+P P + + +I G
Sbjct: 123 EVIVKTSHTLYNLDKIIELNGGQPPLTYKRF--QTLISRMDP----PEMPVETLSNSIMG 176
Query: 183 CSIEDLGLEDESEK---SSNALLG---RGW-SPGWSNAD-KVLTEFVEQHLLR--YYKNR 232
C + + ED +K S LG G S W + + LT +E+HL R + N
Sbjct: 177 CCVTPVS-EDHGDKYGVPSLEELGFDIEGLPSAVWPGGETEALTR-IERHLERKAWVANF 234
Query: 233 QKLGGNSTSLL------SPYLHFGELSVRKVFQCLWMKQILWAKEENFEGKESVTFFLRA 286
++ N+ SLL SPYL FG LS R + L L+ K + ++ + +
Sbjct: 235 ERPRMNANSLLASPTGLSPYLRFGCLSCRLFYFKL---TDLYRKVKK-TSTPPLSLYGQL 290
Query: 287 MGLREYSRYLCFN--FPFTHERPLLSNLKYFPWHADLGNFKAWRQGRTGYPLVDAGMREL 344
+ + N F P+ + PW + W + +TG+P +DA M +L
Sbjct: 291 LWREFFYTAATTNPRFDKMEGNPICVRI---PWDKNPEALAKWAEAKTGFPWIDAIMTQL 347
Query: 345 WATGWIHNRIRVIVSSFAVKV-LLLPWRWGMKYFWDTLLDADLECDILGWQYISGSLPDG 403
GWIH+ R V+ F + L + W GMK F + LLDAD + W ++S S
Sbjct: 348 RQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSVNAGSWMWLSCS-SFF 406
Query: 404 HELERLDSPEIQGSKFDPEGEYVRQWLPELARMPTEWIHHPWDAPPNVLKAAGVELGLNY 463
+ P G + DP G+++R++LP L P ++I+ PW+AP +V AA +G++Y
Sbjct: 407 QQFFHCYCPVGFGRRTDPNGDFIRRYLPILRGFPAKYIYDPWNAPDSVQAAAKCIIGVHY 466
Query: 464 PKPIID 469
PKP+++
Sbjct: 467 PKPMVN 472
>UNIPROTKB|F1SPQ5 [details] [associations]
symbol:CRY1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042752 "regulation of circadian rhythm" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003690
"double-stranded DNA binding" evidence=IEA] [GO:0000988 "protein
binding transcription factor activity" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0003913 "DNA photolyase activity" evidence=IEA]
InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875
GO:GO:0005739 GO:GO:0005634 GO:GO:0007623 GO:GO:0006281
GO:GO:0042752 GO:GO:0000122 GO:GO:0003690 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
GeneTree:ENSGT00500000044813 OMA:FDTDGLP GO:GO:0000988
EMBL:CU463085 EMBL:CU462969 Ensembl:ENSSSCT00000000173
Uniprot:F1SPQ5
Length = 589
Score = 389 (142.0 bits), Expect = 9.4e-34, P = 9.4e-34
Identities = 142/490 (28%), Positives = 221/490 (45%)
Query: 1 MGGNRTIVWFRRDLRIEDNPALAAAARDGSVFP-VYTWCPKEEGQFYPGRVSRW-WLKQS 58
MG N + WFR+ LR+ DNPAL + VY P G G ++RW +L Q
Sbjct: 1 MGVN-AVHWFRKGLRLHDNPALKECIQGADTIRCVYILDPWFAGSSNVG-INRWRFLLQC 58
Query: 59 LSYLGQSLKSLGAELVLFKTESTLAALLECISAIKATKVVFNHLYDPVSLVRDHSIKEKL 118
L L +L+ L + L + + + TK+ + +P RD +IK+
Sbjct: 59 LEDLDANLRKLNSRLFVIRGQPA-DVFPRLFKEWNITKLSIEYDSEPFGKERDAAIKKLA 117
Query: 119 VELGISVQSYNGDLLYEPWEIYD-ERGHAFTTFDAYWDKCLQMQMEPASILPPWRLVQAA 177
E G+ V LY+ +I + G T+ + + L +MEP I P + +
Sbjct: 118 TEAGVEVIVRISHTLYDLDKIIELNGGQPPLTYKRF--QTLISKMEPLEI--PVETITSE 173
Query: 178 GTIDGCSIEDLGLEDESEKSSNALLGR-GWS----PG--WSNAD-KVLTEFVEQHLLR-- 227
I+ C+ L +D EK L G+ P W + + LT +E+HL R
Sbjct: 174 -VIEKCTTP-LS-DDHDEKYGVPSLEELGFDTDGLPSAVWPGGETEALTR-LERHLERKA 229
Query: 228 YYKNRQKLGGNSTSLL------SPYLHFGELSVRKVFQCLWMKQILWAKEENFEGKESVT 281
+ N ++ N+ SLL SPYL FG LS R +F + K K+ ++
Sbjct: 230 WVANFERPRMNANSLLASPTGLSPYLRFGCLSCR-LF---YFKLTDLYKKVKKNSSPPLS 285
Query: 282 FFLRAMGLREYSRYLCFNFPFTHERPLLSNLKYFPWHADLGNFKAWRQGRTGYPLVDAGM 341
+ + + RE+ N P + PW + W +GRTG+P +DA M
Sbjct: 286 LYGQLLW-REFFYTAATNNPRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIM 344
Query: 342 RELWATGWIHNRIRVIVSSFAVKV-LLLPWRWGMKYFWDTLLDADLECDILGWQYISGSL 400
+L GWIH+ R V+ F + L + W GMK F + LLDAD + W ++S S
Sbjct: 345 TQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLSCS- 403
Query: 401 PDGHELERLDSPEIQGSKFDPEGEYVRQ-WLPELARMPTEWIHHPWDAPPNVLKAAGVEL 459
+ P G + DP G+Y+R+ +LP L P ++I+ PW+AP + K A +
Sbjct: 404 SFFQQFFHCYCPVGFGRRTDPNGDYIRRRYLPVLRGFPAKYIYDPWNAPEGIQKVAKCLI 463
Query: 460 GLNYPKPIID 469
G+NYPKP+++
Sbjct: 464 GVNYPKPMVN 473
>ZFIN|ZDB-GENE-010426-2 [details] [associations]
symbol:cry1a "cryptochrome 1a" species:7955 "Danio
rerio" [GO:0006281 "DNA repair" evidence=IEA] [GO:0003913 "DNA
photolyase activity" evidence=IEA] [GO:0009416 "response to light
stimulus" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0009649
"entrainment of circadian clock" evidence=IDA] [GO:0042542
"response to hydrogen peroxide" evidence=IEP] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 ZFIN:ZDB-GENE-010426-2
GO:GO:0045892 GO:GO:0009649 GO:GO:0006281 GO:GO:0005667
GO:GO:0009416 GO:GO:0042542 Gene3D:3.40.50.620 InterPro:IPR014729
KO:K02295 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
HOVERGEN:HBG053470 EMBL:BC124762 IPI:IPI00650675 UniGene:Dr.82313
ProteinModelPortal:Q08BE4 STRING:Q08BE4 KEGG:dre:100003956
InParanoid:Q08BE4 NextBio:20786059 ArrayExpress:Q08BE4
Uniprot:Q08BE4
Length = 619
Score = 390 (142.3 bits), Expect = 1.1e-33, P = 1.1e-33
Identities = 137/479 (28%), Positives = 217/479 (45%)
Query: 6 TIVWFRRDLRIEDNPALAAAARDG-SVFPVYTWCPKEEGQFYPGRVSRW-WLKQSLSYLG 63
T+ WFR+ LR+ DNP+L + SV VY P G G +SRW +L Q L L
Sbjct: 5 TVHWFRKGLRLHDNPSLRDSILGAHSVRCVYILDPWFAGSSNVG-ISRWRFLLQCLEDLD 63
Query: 64 QSLKSLGAELVLFKTESTLAALLECISAIKATKVVFNHLYDPVSLVRDHSIKEKLVELGI 123
SL+ L + L + + + T ++ + + +P RD +IK+ E G+
Sbjct: 64 ASLRKLNSRLFVIRGQPT-DVFPRLFKEWNINRLSYEYDSEPFGKERDAAIKKLANEAGV 122
Query: 124 SVQSYNGDLLYEPWEIYD-ERGHAFTTFDAYWDKCLQMQ-ME-PASILPPWRLVQAAGTI 180
V LY+ +I + G + T+ + +M+ +E PA + + +
Sbjct: 123 EVIVRISHTLYDLDKIIELNGGQSPLTYKRFQTLISRMEAVETPAETITAEVMGPCTTPL 182
Query: 181 DGCSIEDLGLEDESEKS--SNALLGRGWSPGWSNADKVLTEFVEQHLLR--YYKNRQKLG 236
E G+ E + L W G + A LT +E+HL R + N ++
Sbjct: 183 SDDHDEKFGVPSLEELGFDTEGLSSAVWPGGETEA---LTR-LERHLERKAWVANFERPR 238
Query: 237 GNSTSLL------SPYLHFGELSVRKVFQCLWMKQILWAKEENFEGKESVTFFLRAMGLR 290
N+ SLL SPYL FG LS R + L L+ K + ++ + + + R
Sbjct: 239 MNANSLLASPTGLSPYLRFGCLSCRLFYFKL---TDLYRKVKK-NSSPPLSLYGQLLW-R 293
Query: 291 EYSRYLCFNFPFTHERPLLSNLKYFPWHADLGNFKAWRQGRTGYPLVDAGMRELWATGWI 350
E+ N P + PW + W +GRTG+P +DA M +L GWI
Sbjct: 294 EFFYTAATNNPRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWI 353
Query: 351 HNRIRVIVSSFAVKV-LLLPWRWGMKYFWDTLLDADLECDILGWQYISGSLPDGHELERL 409
H+ R V+ F + L + W GMK F + LLDAD + W ++S S +
Sbjct: 354 HHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSVNAGSWMWLSCS-SFFQQFFHC 412
Query: 410 DSPEIQGSKFDPEGEYVRQWLPELARMPTEWIHHPWDAPPNVLKAAGVELGLNYPKPII 468
P G + DP G+Y+R++LP L P ++I+ PW+AP +V KAA +G++YP P++
Sbjct: 413 YCPVSFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNAPESVQKAAKCIIGVHYPMPMV 471
>ZFIN|ZDB-GENE-120215-243 [details] [associations]
symbol:si:ch73-25i22.2 "si:ch73-25i22.2"
species:7955 "Danio rerio" [GO:0003913 "DNA photolyase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
InterPro:IPR002081 InterPro:IPR005101 InterPro:IPR018394
Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
ZFIN:ZDB-GENE-120215-243 GO:GO:0006281 GO:GO:0003913
SUPFAM:SSF48173 GeneTree:ENSGT00500000044813 EMBL:CU929153
Ensembl:ENSDART00000151373 Uniprot:I3ITK7
Length = 316
Score = 372 (136.0 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 72/165 (43%), Positives = 104/165 (63%)
Query: 317 WHADLGNFKAWRQGRTGYPLVDAGMRELWATGWIHNRIRVIVSSFAVKVLLLPWRWGMKY 376
W +D + KAW++GRTGYPLVDA MR+LW TGW++N +R +V+SF + L PW+ G ++
Sbjct: 4 WSSDHAHLKAWQRGRTGYPLVDAAMRQLWQTGWMNNYMRHVVASFLIAYLHFPWQEGYRW 63
Query: 377 FWDTLLDADLECDILGWQYISGSLPDGHELERLDSPEIQGSKFDPEGEYVRQWLPELARM 436
F DTL+DAD+ D + WQ +G + + P DP G +VRQW PEL +
Sbjct: 64 FQDTLVDADVAIDAMMWQ--NGGMCGLDHWNFVMHPIDAALTCDPCGTFVRQWCPELKAL 121
Query: 437 PTEWIHHPWDAPPNVLKAAGVELGLNYPKPIIDLDLGRERLTQAI 481
P + IH PW P ++L+ AGV G +YP+ I+ +DL ER Q++
Sbjct: 122 PDDLIHKPWKCPTSMLRRAGVVFGDSYPERIV-IDL-EERRAQSL 164
>ZFIN|ZDB-GENE-010426-5 [details] [associations]
symbol:cry2b "cryptochrome 2b" species:7955 "Danio
rerio" [GO:0006281 "DNA repair" evidence=IEA] [GO:0003913 "DNA
photolyase activity" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 ZFIN:ZDB-GENE-010426-5
GO:GO:0045892 GO:GO:0006281 Gene3D:3.40.50.620 InterPro:IPR014729
HOGENOM:HOG000245622 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
HOVERGEN:HBG053470 EMBL:BC096780 EMBL:BC164795 IPI:IPI00498674
UniGene:Dr.31496 InParanoid:Q4V9Q3 Uniprot:Q4V9Q3
Length = 639
Score = 389 (142.0 bits), Expect = 1.7e-33, P = 1.7e-33
Identities = 140/489 (28%), Positives = 224/489 (45%)
Query: 6 TIVWFRRDLRIEDNPALAAAARDGSVFP-VYTWCPKEEGQFYPGRVSRW-WLKQSLSYLG 63
++ WFR+ LR+ DNPAL A VY P G G V+RW +L QSL L
Sbjct: 5 SVHWFRKGLRLHDNPALLEALNGADTLRCVYFLDPWFAGASNLG-VNRWRFLLQSLEDLD 63
Query: 64 QSLKSLGAELVLFKTESTLAALLECISAIKATKVVFNHLYDPVSLVRDHSIKEKLVELGI 123
SL+ L + L + + + K +++ F +P RD +IK+ E G+
Sbjct: 64 ASLRKLNSCLFVIRGQPA-DIFPRLFKEWKVSRLTFEFDSEPFGKERDAAIKKLACEAGV 122
Query: 124 SVQSYNGDLLYEPWEIYD-ERGHAFTTFDAYWDKCLQMQMEPASILPPWRLVQAAGTIDG 182
V LY+ I + G + T+ + + L MEP PP G +
Sbjct: 123 EVIVKISHTLYDLDRIIELNGGQSPLTYKRF--QTLVSSMEPPD--PPLSSPDR-GMMGK 177
Query: 183 CSIEDLGLEDESEKSSNALL---G---RGWSPG-WSNADKVLTEFVEQHL-----LRYYK 230
C + + E+ +K LL G G +P W + + +E+HL + + +
Sbjct: 178 C-VTPIS-ENHRDKYGVPLLEELGFDTEGLAPAVWPGGESEALKRMERHLGPDSTVAWQE 235
Query: 231 NRQKLGGNSTSL------LSPYLHFGELSVRKVFQCLWMKQILWAKEENFEGKESVTFFL 284
N ++ N++ L LSPYL FG LS R +F C + Q+ ++N S++ +
Sbjct: 236 NFERPKMNASPLMASPLGLSPYLRFGCLSCR-LFYCK-LTQLYKKVKKNMN--PSISLYD 291
Query: 285 RAMGLREYSRYLCFNFP-FTHER--PLLSNLKYFPWHADLGNFKAWRQGRTGYPLVDAGM 341
+ + RE+ N P F P+ + PW + W + +TG+P +DA M
Sbjct: 292 KILW-REFFYTAATNNPRFDRMEGNPICIRI---PWDRNAEALAKWAEAKTGFPWIDAIM 347
Query: 342 RELWATGWIHNRIRVIVSSFAVKV-LLLPWRWGMKYFWDTLLDADLECDILGWQYISGSL 400
+L GWIH+ R V+ F + L + W GMK F + LLDAD + W S S
Sbjct: 348 MQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSVNAGSWLCHSCS- 406
Query: 401 PDGHELERLDSPEIQGSKFDPEGEYVRQWLPELARMPTEWIHHPWDAPPNVLKAAGVELG 460
+ P G + DP G+++R++LP L P ++I+ PW+AP +V AA +G
Sbjct: 407 SFFQQFFHCYCPVGFGRRIDPNGDFIRRYLPVLRDFPAKYIYDPWNAPHDVQLAAKCVIG 466
Query: 461 LNYPKPIID 469
++YPKP+++
Sbjct: 467 VDYPKPMVN 475
>UNIPROTKB|G4MNA0 [details] [associations]
symbol:MGG_02071 "Cryptochrome-1" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050
Pfam:PF00875 GO:GO:0006281 EMBL:CM001231 Gene3D:3.40.50.620
InterPro:IPR014729 KO:K02295 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 RefSeq:XP_003708836.1 EnsemblFungi:MGG_02071T0
GeneID:2681226 KEGG:mgr:MGG_02071 Uniprot:G4MNA0
Length = 679
Score = 253 (94.1 bits), Expect = 1.5e-31, Sum P(3) = 1.5e-31
Identities = 58/173 (33%), Positives = 93/173 (53%)
Query: 292 YSRYLCFNFPFTHERPLLSN--LKYFPWHADLGN----FKAWRQGRTGYPLVDAGMRELW 345
+ R++ ++ P E +S L+ F + D F+ W G+TG+P +DA MR+L
Sbjct: 349 HCRFIPWHLPSHVEDNAVSGQVLRKFEYEVDSEQAESWFRRWEAGQTGFPWIDALMRQLR 408
Query: 346 ATGWIHNRIRVIVSSFAVKV-LLLPWRWGMKYFWDTLLDADLECDILGWQYISGSLPDGH 404
GWIH+ R V+ F + + W G+ F + LLD + C+ WQ++S +
Sbjct: 409 VEGWIHHLGRHSVACFLTRGGCYVSWERGLDVFEELLLDHEPACNAGNWQWLSCTAFFSQ 468
Query: 405 ELERLDSPEIQGSKFDPEGEYVRQWLPELARMPTEWIHHPWDAPPNVLKAAGV 457
R SP G K+DP+G ++R+W+PELA + ++I+ PW AP L+ AGV
Sbjct: 469 YF-RCYSPISFGKKWDPDGTFIRKWVPELASLDKKYIYEPWKAPEAELRRAGV 520
Score = 151 (58.2 bits), Expect = 1.5e-31, Sum P(3) = 1.5e-31
Identities = 47/148 (31%), Positives = 70/148 (47%)
Query: 1 MGGNRTIVWFRRDLRIEDNPALAAAAR-DGSV-FPVYTWCPKEEGQFYPGRVSRW-WLKQ 57
MG R I WFR DLR+ D+PAL AA D +V +P++TW P + G ++RW +L
Sbjct: 1 MGSARVIYWFRTDLRLHDSPALQAALDLDPAVLWPIFTWDPHYVYRSRGG-LNRWQYLLD 59
Query: 58 SLSYLGQSLKSLGAELVLFKTESTLAALL-ECISAIKATKVVFNHLYDPVSLVRDHSIKE 116
+ L S+ +L LF +L + A K T +VF D + RD +K+
Sbjct: 60 CQNDLSASITNLNPRSKLFVLREAPQSLFPKLFKAWKVTHLVFEKDTDAYARQRDEVVKK 119
Query: 117 KLVELGISVQSYNGDLLYEPWEIYDERG 144
G+ V + G L++ I G
Sbjct: 120 AAQAAGVKVITRYGRTLWDSDAIVKANG 147
Score = 66 (28.3 bits), Expect = 1.5e-31, Sum P(3) = 1.5e-31
Identities = 13/17 (76%), Positives = 15/17 (88%)
Query: 239 STSLLSPYLHFGELSVR 255
ST+LLSP +HFG LSVR
Sbjct: 276 STTLLSPAMHFGSLSVR 292
>FB|FBgn0025680 [details] [associations]
symbol:cry "cryptochrome" species:7227 "Drosophila
melanogaster" [GO:0007623 "circadian rhythm"
evidence=IGI;IEP;IMP;NAS;TAS;IPI] [GO:0009882 "blue light
photoreceptor activity" evidence=IMP] [GO:0003913 "DNA photolyase
activity" evidence=ISS;IMP] [GO:0009785 "blue light signaling
pathway" evidence=IMP] [GO:0050660 "flavin adenine dinucleotide
binding" evidence=IMP;IDA] [GO:0008020 "G-protein coupled
photoreceptor activity" evidence=ISS] [GO:0009588 "UV-A, blue light
phototransduction" evidence=ISS] [GO:0009881 "photoreceptor
activity" evidence=IMP;NAS;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0043234 "protein complex"
evidence=IPI] [GO:0005641 "nuclear envelope lumen" evidence=IDA]
[GO:0000060 "protein import into nucleus, translocation"
evidence=IMP] [GO:0009416 "response to light stimulus"
evidence=IMP;TAS] [GO:0009649 "entrainment of circadian clock"
evidence=IDA;IMP] [GO:0042332 "gravitaxis" evidence=IMP]
[GO:0009637 "response to blue light" evidence=NAS;TAS] [GO:0006281
"DNA repair" evidence=IEA] [GO:0043153 "entrainment of circadian
clock by photoperiod" evidence=IMP] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0042752 "regulation of circadian rhythm" evidence=IMP;IDA]
[GO:0045475 "locomotor rhythm" evidence=IMP] [GO:0007602
"phototransduction" evidence=IMP] [GO:0050980 "detection of light
stimulus involved in magnetoreception" evidence=IMP] [GO:0071000
"response to magnetism" evidence=IMP] [GO:0050958
"magnetoreception" evidence=IMP] InterPro:IPR002081
InterPro:IPR005101 Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 EMBL:AE014297 GO:GO:0005737
GO:GO:0048471 GO:GO:0045892 GO:GO:0043234 GO:GO:0050660
GO:GO:0006281 GO:GO:0006351 GO:GO:0005641 GO:GO:0000060
GO:GO:0045475 GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729
GO:GO:0007602 GO:GO:0043153 eggNOG:COG0415 KO:K02295 OMA:QMFLHTV
OrthoDB:EOG437PW2 GO:GO:0009882 SUPFAM:SSF52425 SUPFAM:SSF48173
PROSITE:PS51645 EMBL:AF099734 EMBL:AB018400 EMBL:AB019389
EMBL:AY051514 RefSeq:NP_732407.1 UniGene:Dm.4579 PDB:4GU5
PDBsum:4GU5 ProteinModelPortal:O77059 SMR:O77059 DIP:DIP-29424N
IntAct:O77059 MINT:MINT-1328097 STRING:O77059 PaxDb:O77059
PRIDE:O77059 EnsemblMetazoa:FBtr0083736 GeneID:42305
KEGG:dme:Dmel_CG3772 UCSC:CG3772-RA FlyBase:FBgn0025680
GeneTree:ENSGT00500000044813 InParanoid:O77059 PhylomeDB:O77059
GenomeRNAi:42305 NextBio:828142 Bgee:O77059 GO:GO:0050980
GO:GO:0042332 GO:GO:0071000 Uniprot:O77059
Length = 542
Score = 304 (112.1 bits), Expect = 2.5e-31, Sum P(3) = 2.5e-31
Identities = 88/286 (30%), Positives = 142/286 (49%)
Query: 206 WSPGWSNADKVLTEF--VEQHLLR--YYKNRQKLGG--NSTSLLSPYLHFGELSVRKVFQ 259
W G + A +L E VEQH +Y Q L +S +S +L FG LSVR+ +
Sbjct: 223 WRGGETQALLLLDERLKVEQHAFERGFYLPNQALPNIHDSPKSMSAHLRFGCLSVRRFYW 282
Query: 260 CLW--MKQI-LWA--KEENFEGKESVTFFLRAMGLREYSRYLCFNFPFTHERPLLSNLKY 314
+ K + L A + G +T L REY + N P ++R +++
Sbjct: 283 SVHDLFKNVQLRACVRGVQMTGGAHITGQLI---WREYFYTMSVNNP-NYDRMEGNDICL 338
Query: 315 -FPWHADLGNF-KAWRQGRTGYPLVDAGMRELWATGWIHNRIRVIVSSFAVKV-LLLPWR 371
PW N ++WR G+TG+PL+D MR+L A GW+H+ +R V++F + L W
Sbjct: 339 SIPWAKPNENLLQSWRLGQTGFPLIDGAMRQLLAEGWLHHTLRNTVATFLTRGGLWQSWE 398
Query: 372 WGMKYFWDTLLDADLECDILGWQYISGSLPDGH-ELERLDSPEIQGSKFDPEGEYVRQWL 430
G+++F LLDAD W ++S S + + + P + DP+G Y++Q++
Sbjct: 399 HGLQHFLKYLLDADWSVCAGNWMWVSSSAFERLLDSSLVTCPVALAKRLDPDGTYIKQYV 458
Query: 431 PELARMPTEWIHHPWDAPPNVLKAAGVELGLNYPKPIIDLDLGRER 476
PEL +P E++H PW + +G++YP+ IIDL + +R
Sbjct: 459 PELMNVPKEFVHEPWRMSAEQQEQYECLIGVHYPERIIDLSMAVKR 504
Score = 104 (41.7 bits), Expect = 2.5e-31, Sum P(3) = 2.5e-31
Identities = 39/150 (26%), Positives = 65/150 (43%)
Query: 2 GGNRTIVWFRRDLRIEDNPALAAAARD---G-SVFPVYTWCPKEEGQFYPGRVSRWWLKQ 57
G N ++WFR LR+ DNPAL AA D G ++ PV+ + + G G +L
Sbjct: 5 GAN--VIWFRHGLRLHDNPALLAALADKDQGIALIPVFIFDGESAGTKNVGYNRMRFLLD 62
Query: 58 SLSYLGQSLKSL--G-AELVLFKTESTLAALLECISAIKATKVVFNHLYDPVSLVRDHSI 114
SL + L++ G L++F+ E ++ ++ +P+ RD SI
Sbjct: 63 SLQDIDDQLQAATDGRGRLLVFEGEPAYI-FRRLHEQVRLHRICIEQDCEPIWNERDESI 121
Query: 115 KEKLVELGISVQSYNGDLLYEPWEIYDERG 144
+ EL I L++P + + G
Sbjct: 122 RSLCRELNIDFVEKVSHTLWDPQLVIETNG 151
Score = 45 (20.9 bits), Expect = 2.5e-31, Sum P(3) = 2.5e-31
Identities = 11/33 (33%), Positives = 15/33 (45%)
Query: 529 ISSNDQKVPSFQNGKNNLPSRKRPKNVEEERQY 561
+ N + S +N P RP N EE RQ+
Sbjct: 502 VKRNMLAMKSLRNSLITPPPHCRPSNEEEVRQF 534
>UNIPROTKB|F1P3P5 [details] [associations]
symbol:CRY2 "Cryptochrome-2" species:9031 "Gallus gallus"
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] [GO:0042752 "regulation of circadian rhythm"
evidence=IEA] [GO:2000118 "regulation of sodium-dependent phosphate
transport" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000988 "protein binding transcription factor activity"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0006606
"protein import into nucleus" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 GO:GO:0005739
GO:GO:0005634 GO:GO:0003684 GO:GO:0007623 GO:GO:0006281
GO:GO:0042752 GO:GO:0000122 GO:GO:0006606 GO:GO:0003697
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 GeneTree:ENSGT00500000044813 GO:GO:0000988
EMBL:AADN02033514 EMBL:AADN02033515 EMBL:AADN02033516
IPI:IPI00821771 Ensembl:ENSGALT00000013745 ArrayExpress:F1P3P5
Uniprot:F1P3P5
Length = 531
Score = 363 (132.8 bits), Expect = 4.3e-31, P = 4.3e-31
Identities = 117/435 (26%), Positives = 199/435 (45%)
Query: 50 VSRW-WLKQSLSYLGQSLKSLGAELVLFKTESTLAALLECISAIKATKVVFNHLYDPVSL 108
++RW +L QSL L SL+ L + L + + + T T++ F + +P
Sbjct: 7 INRWRFLLQSLEDLDNSLRKLNSRLFVVRGQPT-DVFPRLFKEWGVTRLTFEYDSEPFGK 65
Query: 109 VRDHSIKEKLVELGISVQSYNGDLLYEPWEIYDERGH----AFTTFDAYWDKCLQMQMEP 164
RD +I + E G+ V N LY+ I + G+ + F A + +++ +P
Sbjct: 66 ERDAAIIKLAKEAGVEVVIENSHTLYDLDRIIELNGNKPPLTYKRFQAIISR-MELPKKP 124
Query: 165 ASILPPWRLVQAAGTIDGCSIEDLGLEDESEKS--SNALLGRGWSPGWSNADKVLTEFVE 222
S + ++ I + G+ E ++ L W G + A L + +E
Sbjct: 125 VSSIVSQQMETCKVDIQENHDDVYGVPSLEELGFPTDGLAPAVWQGGETEALARLDKHLE 184
Query: 223 QHLLRYYKNRQKLGGNSTSL----LSPYLHFGELSVRKVFQCLWMKQILWAKEENFEGKE 278
+ R ++ NS LSPYL FG LS R + LW L+ K +
Sbjct: 185 RKAWVANYERPRMNANSLLASPTGLSPYLRFGCLSCRLFYYHLWE---LYKKVKR-NSTP 240
Query: 279 SVTFFLRAMGLREYSRYLCFNFP-FTHER--PLLSNLKYFPWHADLGNFKAWRQGRTGYP 335
++ + + + RE+ N P F P+ + PW + W +G+TG+P
Sbjct: 241 PLSLYGQLLW-REFFYTAATNNPKFDRMEGNPICIQI---PWDKNPEALAKWAEGKTGFP 296
Query: 336 LVDAGMRELWATGWIHNRIRVIVSSFAVKV-LLLPWRWGMKYFWDTLLDADLECDILGWQ 394
+DA M +L GWIH+ R V+ F + L + W G++ F + LLDAD + W
Sbjct: 297 WIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWESGVRVFDELLLDADFSVNAGSWM 356
Query: 395 YISGSLPDGHELERLDSPEIQGSKFDPEGEYVRQWLPELARMPTEWIHHPWDAPPNVLKA 454
++S S + P G + DP G+YV+++LP+L P+ +I+ PW+AP +V KA
Sbjct: 357 WLSCSA-FFQQFFHCYCPVGFGRRTDPSGDYVKRYLPKLKGFPSRYIYEPWNAPESVQKA 415
Query: 455 AGVELGLNYPKPIID 469
A +G++YPKP+++
Sbjct: 416 AKCIIGVDYPKPMVN 430
>UNIPROTKB|F1NX44 [details] [associations]
symbol:CRY2 "Cryptochrome-2" species:9031 "Gallus gallus"
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] InterPro:IPR005101 Pfam:PF03441
InterPro:IPR006050 Pfam:PF00875 GO:GO:0005739 GO:GO:0005634
GO:GO:0003684 GO:GO:0007623 GO:GO:0006281 GO:GO:0042752
GO:GO:0000122 GO:GO:0006606 GO:GO:0003697 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
GeneTree:ENSGT00500000044813 GO:GO:0000988 IPI:IPI00572393
OMA:DIQENHD EMBL:AADN02033514 EMBL:AADN02033515 EMBL:AADN02033516
Ensembl:ENSGALT00000038345 ArrayExpress:F1NX44 Uniprot:F1NX44
Length = 537
Score = 363 (132.8 bits), Expect = 5.0e-31, P = 5.0e-31
Identities = 117/435 (26%), Positives = 199/435 (45%)
Query: 50 VSRW-WLKQSLSYLGQSLKSLGAELVLFKTESTLAALLECISAIKATKVVFNHLYDPVSL 108
++RW +L QSL L SL+ L + L + + + T T++ F + +P
Sbjct: 13 INRWRFLLQSLEDLDNSLRKLNSRLFVVRGQPT-DVFPRLFKEWGVTRLTFEYDSEPFGK 71
Query: 109 VRDHSIKEKLVELGISVQSYNGDLLYEPWEIYDERGH----AFTTFDAYWDKCLQMQMEP 164
RD +I + E G+ V N LY+ I + G+ + F A + +++ +P
Sbjct: 72 ERDAAIIKLAKEAGVEVVIENSHTLYDLDRIIELNGNKPPLTYKRFQAIISR-MELPKKP 130
Query: 165 ASILPPWRLVQAAGTIDGCSIEDLGLEDESEKS--SNALLGRGWSPGWSNADKVLTEFVE 222
S + ++ I + G+ E ++ L W G + A L + +E
Sbjct: 131 VSSIVSQQMETCKVDIQENHDDVYGVPSLEELGFPTDGLAPAVWQGGETEALARLDKHLE 190
Query: 223 QHLLRYYKNRQKLGGNSTSL----LSPYLHFGELSVRKVFQCLWMKQILWAKEENFEGKE 278
+ R ++ NS LSPYL FG LS R + LW L+ K +
Sbjct: 191 RKAWVANYERPRMNANSLLASPTGLSPYLRFGCLSCRLFYYHLWE---LYKKVKR-NSTP 246
Query: 279 SVTFFLRAMGLREYSRYLCFNFP-FTHER--PLLSNLKYFPWHADLGNFKAWRQGRTGYP 335
++ + + + RE+ N P F P+ + PW + W +G+TG+P
Sbjct: 247 PLSLYGQLLW-REFFYTAATNNPKFDRMEGNPICIQI---PWDKNPEALAKWAEGKTGFP 302
Query: 336 LVDAGMRELWATGWIHNRIRVIVSSFAVKV-LLLPWRWGMKYFWDTLLDADLECDILGWQ 394
+DA M +L GWIH+ R V+ F + L + W G++ F + LLDAD + W
Sbjct: 303 WIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWESGVRVFDELLLDADFSVNAGSWM 362
Query: 395 YISGSLPDGHELERLDSPEIQGSKFDPEGEYVRQWLPELARMPTEWIHHPWDAPPNVLKA 454
++S S + P G + DP G+YV+++LP+L P+ +I+ PW+AP +V KA
Sbjct: 363 WLSCSA-FFQQFFHCYCPVGFGRRTDPSGDYVKRYLPKLKGFPSRYIYEPWNAPESVQKA 421
Query: 455 AGVELGLNYPKPIID 469
A +G++YPKP+++
Sbjct: 422 AKCIIGVDYPKPMVN 436
>UNIPROTKB|F1MXB2 [details] [associations]
symbol:CRY1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042752 "regulation of circadian rhythm" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003690
"double-stranded DNA binding" evidence=IEA] [GO:0000988 "protein
binding transcription factor activity" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0003913 "DNA photolyase activity" evidence=IEA]
InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875
GO:GO:0005739 GO:GO:0005634 GO:GO:0007623 GO:GO:0006281
GO:GO:0042752 GO:GO:0000122 GO:GO:0003690 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
GeneTree:ENSGT00500000044813 OMA:FDTDGLP GO:GO:0000988
EMBL:DAAA02013749 EMBL:DAAA02013752 EMBL:DAAA02013750
EMBL:DAAA02013751 IPI:IPI00868590 Ensembl:ENSBTAT00000057061
Uniprot:F1MXB2
Length = 587
Score = 357 (130.7 bits), Expect = 5.4e-30, P = 5.4e-30
Identities = 135/489 (27%), Positives = 219/489 (44%)
Query: 1 MGGNRTIVWFRRDLRIEDNPALAAAARDGSVFP-VYTWCPKEEGQFYPGRVSRW-WLKQS 58
MG N + WFR+ LR+ DNPAL + VY P G G ++RW +L Q
Sbjct: 1 MGVN-AVHWFRKGLRLHDNPALKECIQGADTIRCVYILDPWFAGSSNVG-INRWRFLLQC 58
Query: 59 LSYLGQSLKSLGAELVLFKTESTLAALLECISAIKATKVVFNHLYDPVSLVRDHSIKEKL 118
L L +L+ L + L + + + TK+ + +P RD +IK+
Sbjct: 59 LEDLDANLRKLNSRLFVIRGQPA-DVFPRLFKEWNITKLSIEYDSEPFGKERDAAIKKLA 117
Query: 119 VELGISVQSYNGDLLYEPWEIYD-ERGHAFTTFDAYWDKCLQMQMEPASILPPWRLVQAA 177
E G+ V LY+ +I + G T+ + + L +MEP I P + +
Sbjct: 118 TEAGVEVIVRISHTLYDLDKIIELNGGQPPLTYKRF--QTLISKMEPLEI--PVETITSE 173
Query: 178 GTIDGCSIEDLGLEDESEKSSNALLGR-GWS----PG--WSNAD-KVLTEFVEQHLLR-- 227
I+ C+ L +D EK L G+ P W + + LT +E+HL R
Sbjct: 174 -VIEKCTTP-LS-DDHDEKYGVPSLEELGFDTDGLPSAVWPGGETEALTR-LERHLERKA 229
Query: 228 YYKNRQKLGGNSTSLL------SPYLHFGELSVRKVFQCLWMKQILWAKEENFEGKESVT 281
+ N ++ N+ SLL SPYL FG LS R +F + K K+ ++
Sbjct: 230 WVANFERPRMNANSLLASPTGLSPYLRFGCLSCR-LF---YFKLTDLYKKVKKNSSPPLS 285
Query: 282 FFLRAMGLREYSRYLCFNFPFTHERPLLSNLKYFPWHADLGNFKAWRQGRTGYPLVDAGM 341
+ + + RE+ N P + PW + W +GRTG+P +DA M
Sbjct: 286 LYGQLLW-REFFYTAATNNPRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIM 344
Query: 342 RELWATGWIHNRIRVIVSSFAVKV-LLLPWRWGMKYFWDTLLDADLECDILGWQYISGSL 400
+L GWIH+ R V+ F + L + W GMK L+ ++ +Q+++
Sbjct: 345 TQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVKKHLFLNYRESVNLKSFQWLNQPT 404
Query: 401 PDGHELERLDSPEIQGSKFDPEGEYVRQWLPELARMPTEWIHHPWDAPPNVLKAAGVELG 460
H++ SP + GS+ + +G R++LP L P ++I+ PW+AP + K A +G
Sbjct: 405 HQ-HQVVHEYSPLLMGSRDEEKGNNKRRYLPVLRGFPAKYIYDPWNAPEGIQKVAKCLIG 463
Query: 461 LNYPKPIID 469
+NYPKP+++
Sbjct: 464 VNYPKPMVN 472
>UNIPROTKB|Q293P8 [details] [associations]
symbol:cry "Cryptochrome-1" species:46245 "Drosophila
pseudoobscura pseudoobscura" [GO:0000060 "protein import into
nucleus, translocation" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005641 "nuclear envelope lumen" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0009785 "blue light
signaling pathway" evidence=ISS] [GO:0009882 "blue light
photoreceptor activity" evidence=ISS] [GO:0042752 "regulation of
circadian rhythm" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 GO:GO:0005737 GO:GO:0048471
GO:GO:0045892 GO:GO:0050660 GO:GO:0006281 GO:GO:0006351
GO:GO:0005641 GO:GO:0042752 GO:GO:0048511 GO:GO:0000060
EMBL:CM000070 GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729
GenomeReviews:CM000070_GR eggNOG:COG0415 KO:K02295
OrthoDB:EOG437PW2 GO:GO:0009882 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 PROSITE:PS51645 RefSeq:XP_001360014.2
GeneID:4803241 KEGG:dpo:Dpse_GA17677 FlyBase:FBgn0077687
InParanoid:Q293P8 Uniprot:Q293P8
Length = 540
Score = 289 (106.8 bits), Expect = 8.3e-30, Sum P(3) = 8.3e-30
Identities = 88/291 (30%), Positives = 138/291 (47%)
Query: 206 WSPGWSNADKVLTEF--VEQHLLR--YYKNRQKLGG--NSTSLLSPYLHFGELSVRKVFQ 259
W G + A +L E VE++ YY Q + +S +L FG LSVR+ +
Sbjct: 223 WRGGETQALALLEERLKVERNAFERGYYLPNQANPNIQEAPKSMSAHLRFGCLSVRRFYW 282
Query: 260 CLW--MKQILWA---KEENFEGKESVTFFLRAMGLREYSRYLCFNFPFTHERPLLSNLKY 314
+ + + A + EG +T L REY + N P ++R + +
Sbjct: 283 SVHDLFENVQLAACVRGVQIEGGAHITGQLI---WREYFYTMSVNNP-NYDRMEGNEICL 338
Query: 315 -FPW-HADLGNFKAWRQGRTGYPLVDAGMRELWATGWIHNRIRVIVSSFAVKV-LLLPWR 371
PW D + WR G+TG+PL+D MR+L A GW+H+ +R V++F + L W
Sbjct: 339 TIPWAKPDENLLQRWRLGQTGFPLIDGAMRQLLAEGWLHHTLRNTVATFLTRGGLWQSWE 398
Query: 372 WGMKYFWDTLLDADLECDILGWQYISGSLPDGH-ELERLDSPEIQGSKFDPEGEYVRQWL 430
G+K+F LLDAD W ++S S + + + P + DPEG Y+R+++
Sbjct: 399 PGLKHFLKYLLDADWSVCAGNWMWVSSSAFERLLDSSLVTCPVALAKRLDPEGVYIRRYV 458
Query: 431 PELARMPTEWIHHPWDAPPNVLKAAGVELGLNYPKPIIDLDLGRERLTQAI 481
PEL +P E+IH PW +G++YP+ IIDL +R A+
Sbjct: 459 PELKNLPKEYIHEPWRLSAEQQVKFECLIGVHYPERIIDLSKAVKRNMMAM 509
Score = 108 (43.1 bits), Expect = 8.3e-30, Sum P(3) = 8.3e-30
Identities = 43/150 (28%), Positives = 66/150 (44%)
Query: 2 GGNRTIVWFRRDLRIEDNPALAAAA--RDGSV--FPVYTWCPKEEGQFYPGRVSRWWLKQ 57
G N ++WFR LR+ DNPAL AA +D + PV+ + + G G +L
Sbjct: 5 GAN--VLWFRHGLRLHDNPALLAALEEKDQGIPLIPVFIFDGESAGTKSVGYNRMRFLLD 62
Query: 58 SLSYLGQSLKSL--G-AELVLFKTESTLAALLECISAIKATKVVFNHLYDPVSLVRDHSI 114
SL L + L+S G L +F+ E TL ++ K+ +P+ RD S
Sbjct: 63 SLQDLDEQLQSATEGRGRLFVFEGEPTLI-FRRLHEQVRLHKICAELDCEPIWNERDESA 121
Query: 115 KEKLVELGISVQSYNGDLLYEPWEIYDERG 144
+ ELGI L++P + + G
Sbjct: 122 RLLCRELGIEYVEKVSHTLWDPRLVIETNG 151
Score = 44 (20.5 bits), Expect = 8.3e-30, Sum P(3) = 8.3e-30
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 529 ISSNDQKVPSFQNGKNNLPSRKRPKNVEEERQY 561
+ N + + +N P RP N EE RQ+
Sbjct: 502 VKRNMMAMTALRNSLITPPPHCRPSNEEEVRQF 534
>UNIPROTKB|B0WRR9 [details] [associations]
symbol:cry "Cryptochrome-1" species:7176 "Culex
quinquefasciatus" [GO:0000060 "protein import into nucleus,
translocation" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005641 "nuclear envelope lumen" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0009785 "blue light signaling
pathway" evidence=ISS] [GO:0009882 "blue light photoreceptor
activity" evidence=ISS] [GO:0042752 "regulation of circadian
rhythm" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147
PROSITE:PS00394 GO:GO:0005737 GO:GO:0048471 GO:GO:0045892
GO:GO:0050660 GO:GO:0006281 GO:GO:0006351 GO:GO:0005641
GO:GO:0042752 GO:GO:0048511 GO:GO:0000060 GO:GO:0018298
eggNOG:COG0415 KO:K02295 OrthoDB:EOG437PW2 GO:GO:0009882
GO:GO:0003913 SUPFAM:SSF48173 EMBL:DS232059 RefSeq:XP_001851403.1
UniGene:Cpi.12243 EnsemblMetazoa:CPIJ009455-RA GeneID:6042266
KEGG:cqu:CpipJ_CPIJ009455 VectorBase:CPIJ009455 PhylomeDB:B0WRR9
Uniprot:B0WRR9
Length = 499
Score = 337 (123.7 bits), Expect = 1.3e-29, Sum P(2) = 1.3e-29
Identities = 94/297 (31%), Positives = 149/297 (50%)
Query: 186 EDLGLEDESEKSSNALLGRG-WSPGWSNADKVLTEFV--EQHLLR--YYKNRQKLGG--N 238
ED G+ E NA + R W+ G + A ++L + E+ R YY Q
Sbjct: 159 EDFGIYYEG----NADIARQRWTGGEAKALELLGRRLKQEEEAFREGYYLPTQARPDFLA 214
Query: 239 STSLLSPYLHFGELSVRKVFQCLWMKQILWAK-EENFEGKESVTFFLRAMGL-REYSRYL 296
S +S L FG LSVR + C+ L+A+ + N + K + + REY +
Sbjct: 215 PPSSMSAALRFGCLSVRMFYWCV---HDLFARVQANNQLKHPGGHHITGQLIWREYFYTM 271
Query: 297 CFNFPFTHERPLLSNLKYFPWH-ADLGNFKAWRQGRTGYPLVDAGMRELWATGWIHNRIR 355
+ P L PW+ A + W++GRTG+PL+DA MR+L A GW+H+ +R
Sbjct: 272 SVHNPHYAVMELNPICLNIPWYEAKDDSLDRWKEGRTGFPLIDAAMRQLMAEGWLHHILR 331
Query: 356 VIVSSFAVKV-LLLPWRWGMKYFWDTLLDADLECDILGWQYISGSLPDGH-ELERLDSPE 413
I ++F + L + W G+++F LLDAD W ++S S + + SP
Sbjct: 332 NITATFLTRGGLWISWEAGVQHFLKYLLDADWSVCAGNWMWVSSSAFEKLLDSSSCTSPV 391
Query: 414 IQGSKFDPEGEYVRQWLPELARMPTEWIHHPWDAPPNVLKAAGVELGLNYPKPIIDL 470
+ DP+GEYV+++LPEL + P ++H PW APP + + G +G +YP P+++L
Sbjct: 392 ALARRLDPKGEYVKRYLPELEKFPALYVHEPWKAPPELQEQYGCVIGKDYPAPMVNL 448
Score = 51 (23.0 bits), Expect = 1.3e-29, Sum P(2) = 1.3e-29
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 513 PAIPQVVLREKSTCPTISSNDQKVPSFQNGKNNLPSRKRPKNVEEERQY 561
PA P V L E + C N + G + P+ RP +++E RQ+
Sbjct: 442 PA-PMVNLAEVNKCNANKMNAIRQKLLDQG-GSTPAHCRPSDMDEVRQF 488
>SGD|S000005913 [details] [associations]
symbol:PHR1 "DNA photolyase involved in photoreactivation"
species:4932 "Saccharomyces cerevisiae" [GO:0005739 "mitochondrion"
evidence=IEA;IDA] [GO:0003729 "mRNA binding" evidence=IDA]
[GO:0000719 "photoreactive repair" evidence=TAS] [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=IEA;IDA;TAS]
[GO:0005634 "nucleus" evidence=IEA;TAS] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0016829 "lyase activity" evidence=IEA] [GO:0018298
"protein-chromophore linkage" evidence=IEA] [GO:0003913 "DNA
photolyase activity" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] InterPro:IPR002081 InterPro:IPR005101
InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
PROSITE:PS00691 SGD:S000005913 InterPro:IPR006050 Pfam:PF00875
GO:GO:0005739 GO:GO:0005634 EMBL:BK006948 GO:GO:0000166
GO:GO:0003677 GO:GO:0003729 GO:GO:0018298 GO:GO:0000719
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645
HOGENOM:HOG000245621 GeneTree:ENSGT00500000044813 KO:K01669
GO:GO:0003904 EMBL:X03183 EMBL:M11578 EMBL:Z75294 PIR:S67298
RefSeq:NP_015031.1 ProteinModelPortal:P05066 SMR:P05066
DIP:DIP-6327N IntAct:P05066 MINT:MINT-688138 STRING:P05066
PaxDb:P05066 PeptideAtlas:P05066 EnsemblFungi:YOR386W GeneID:854568
KEGG:sce:YOR386W CYGD:YOR386w OMA:CEDANAR OrthoDB:EOG4XPTQ3
NextBio:977015 Genevestigator:P05066 GermOnline:YOR386W
Uniprot:P05066
Length = 565
Score = 305 (112.4 bits), Expect = 2.6e-27, Sum P(3) = 2.6e-27
Identities = 69/218 (31%), Positives = 112/218 (51%)
Query: 217 LTEFVEQHLLRYYKNRQKLGGNSTSLLSPYLHFGELSVRKVFQCLWMKQILWAKEENFEG 276
L +F+ +Y + L TS LS Y+ G +S R + + + +
Sbjct: 315 LKDFLGTKSSKYNNEKDMLYLGGTSGLSVYITTGRISTRLIVNQAFQSCNGQIMSKALKD 374
Query: 277 KESVTFFLRAMGLREYSRYLCFNFPFTHE-RPLLSNLKYFPWHADLGNFKAWRQGRTGYP 335
S F++ + R++ R+ N+P+T P + W + F+ W G TG P
Sbjct: 375 NSSTQNFIKEVAWRDFYRHCMCNWPYTSMGMPYRLDTLDIKWENNPVAFEKWCTGNTGIP 434
Query: 336 LVDAGMRELWATGWIHNRIRVIVSSFAVKVLLLPWRWGMKYFWDTLLDADLECDILGWQY 395
+VDA MR+L TG+I+NR R+I +SF K LL+ WRWG ++F L+D D ++ GW +
Sbjct: 435 IVDAIMRKLLYTGYINNRSRMITASFLSKNLLIDWRWGERWFMKHLIDGDSSSNVGGWGF 494
Query: 396 ISGSLPDGHELERLDSPEIQGSKFDPEGEYVRQWLPEL 433
S + D R+ + +IQ K+DP+ +V+QW+PEL
Sbjct: 495 CSSTGIDAQPYFRVFNMDIQAKKYDPQMIFVKQWVPEL 532
Score = 59 (25.8 bits), Expect = 2.6e-27, Sum P(3) = 2.6e-27
Identities = 11/22 (50%), Positives = 16/22 (72%)
Query: 462 NYPKPIIDLDLGRERLTQAIFK 483
NYPKP++DL RER + ++K
Sbjct: 542 NYPKPLVDLKHSRERALK-VYK 562
Score = 52 (23.4 bits), Expect = 2.6e-27, Sum P(3) = 2.6e-27
Identities = 28/98 (28%), Positives = 41/98 (41%)
Query: 9 WFRRDLRIEDNPALAAAA-------RDGSVFPVYTWCPKEEGQFYPGRVSRW---WLKQS 58
WFR DLR+ DN L + + + +Y E + S W ++ +
Sbjct: 80 WFRNDLRLYDNVGLYKSVALFQQLRQKNAKAKLYAVYVINEDDWRAHMDSGWKLMFIMGA 139
Query: 59 LSYLGQSLKSLGAELVL--FKT-ESTLAALLECISAIK 93
L L QSL L L+L F T +STL+ E + K
Sbjct: 140 LKNLQQSLAELHIPLLLWEFHTPKSTLSNSKEFVEFFK 177
Score = 51 (23.0 bits), Expect = 3.3e-27, Sum P(3) = 3.3e-27
Identities = 29/112 (25%), Positives = 48/112 (42%)
Query: 58 SLSYLGQSLKSLGAELVL--FKT-ESTLAALLE--------CISAIKATKVVF--NHLYD 104
+L L QSL L L+L F T +STL+ E C++ T + N Y
Sbjct: 139 ALKNLQQSLAELHIPLLLWEFHTPKSTLSNSKEFVEFFKEKCMNVSSGTGTIITANIEYQ 198
Query: 105 PVSLVRDHSIKEKLVELGISVQSYNGDLLYEPWEIYDERGHAFTTFDAYWDK 156
L RD + E + + ++ Y+ + P I +RG ++ F ++ K
Sbjct: 199 TDELYRDIRLLEN-EDHRLQLKYYHDSCIVAPGLITTDRGTNYSVFTPWYKK 249
>UNIPROTKB|Q7T3R1 [details] [associations]
symbol:LOC395100 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 GO:GO:0006281 GO:GO:0003913 SUPFAM:SSF48173
GeneTree:ENSGT00500000044813 HSSP:P00914 EMBL:AADN02063941
UniGene:Gga.5544 EMBL:AY102068 IPI:IPI00821473
Ensembl:ENSGALT00000040670 HOGENOM:HOG000202408 InParanoid:Q7T3R1
Uniprot:Q7T3R1
Length = 140
Score = 245 (91.3 bits), Expect = 7.5e-20, P = 7.5e-20
Identities = 50/140 (35%), Positives = 74/140 (52%)
Query: 317 WHADLGNFKAWRQGRTGYPLVDAGMRELWATGWIHNRIRVIVSSFAVKV-LLLPWRWGMK 375
W+ D W+ +TG+P +DA M +L GWIH+ R + F + L + W GMK
Sbjct: 2 WYEDAERLHKWKTAQTGFPWIDAIMTQLRQEGWIHHLARHAAACFLTRGDLWISWEEGMK 61
Query: 376 YFWDTLLDADLECDILGWQYISGSLPDGHELERLDSPEIQGSKFDPEGEYVRQWLPELAR 435
F + LLDAD + W ++S S H R+ P G + DPEG+Y+R++LP L
Sbjct: 62 VFEELLLDADYSINAGNWMWLSASA-FFHHYTRIFCPVRFGRRTDPEGQYIRKYLPILKN 120
Query: 436 MPTEWIHHPWDAPPNVLKAA 455
P+++I+ PW A K A
Sbjct: 121 FPSKYIYEPWTASEEEQKQA 140
>UNIPROTKB|Q9KR33 [details] [associations]
symbol:cry1 "Cryptochrome DASH" species:243277 "Vibrio
cholerae O1 biovar El Tor str. N16961" [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 GO:GO:0006355 GO:GO:0003677
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0006281 GO:GO:0006351
GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 PIR:B82155
RefSeq:NP_231448.1 ProteinModelPortal:Q9KR33 DNASU:2613694
GeneID:2613694 KEGG:vch:VC1814 PATRIC:20082676 KO:K01669
OMA:YWLIFEL ProtClustDB:CLSK874544 GO:GO:0003904 InterPro:IPR014133
TIGRFAMs:TIGR02765 Uniprot:Q9KR33
Length = 461
Score = 239 (89.2 bits), Expect = 4.6e-17, P = 4.6e-17
Identities = 113/438 (25%), Positives = 185/438 (42%)
Query: 7 IVWFRRDLRIEDNPALAAAARDGSVFPVYTWCPKEEGQFYPGRVSRW-WLKQSLSYLGQS 65
+ WF DLR+ DNP L A++ + +C F + W + +L Q+
Sbjct: 7 LYWFTNDLRVNDNPLLEQASQQVDRL-ICLYCYPSITPFLARYAQQTQWGEAKKRFLNQT 65
Query: 66 LKSLGAELVLFKTESTLAALLECISAIK--ATKVVFNHLY-DPVSLVRDHSIKEKLVELG 122
L L L + + LL A++ T+V +Y D V+ + ++ +
Sbjct: 66 LADLDHSLSTLGQKLWVTPLLP-YQALRHLLTQVEITDIYVDAVAGSDERQAIARIHQDF 124
Query: 123 ISVQSYNG---DLLYEPWEIYDERGHAFTTFDAYWDKCLQMQMEPASILPPWRLVQAAGT 179
SV + LL EP + +TF + + Q+E S+ P
Sbjct: 125 SSVHIHQQALHSLLSEPQLPFALEALP-STFTQF-----RKQVETISLSAPMGYPHVLPP 178
Query: 180 ID-GCSIEDLGLEDESEKSSNALLGRGWSPGWSNADKVLTEFVEQHLLRYYKNRQKLGGN 238
I+ G + + + E S A +G G G ++ + + RY + R L G
Sbjct: 179 IEQGWQLPLMDIVTEPNHS--AFVG-GEQAGLTHCQNYFSSLLPS---RYKETRNGLDGM 232
Query: 239 STSL-LSPYLHFGELSVRKVFQCLWMKQILWAKEEN-----FEGKESVTFFLRAMGLREY 292
S SP+L G +S + ++ L + + ++ FE F+ A R Y
Sbjct: 233 DYSTKFSPWLALGAVSPKTIYAMLQRYEAVHGANDSTYWIFFELLWREYFYWYA---RRY 289
Query: 293 SRYLCFNFPFTHER-PLLSNLKYFPWHADLGNFKAWRQGRTGYPLVDAGMRELWATGWIH 351
L F F E+ PL S ++A F W+ G T +P+V+A MR+L TG++
Sbjct: 290 GAKL-FRFSGIGEKKPLTS------FYAQ--RFLQWKHGETPFPIVNACMRQLNQTGYMS 340
Query: 352 NRIRVIVSSFAVKVLLLPWRWGMKYFWDTLLDADLECDILGWQYISGSLPDGHELERLDS 411
NR R +V+S V L L WR+G YF L+D D+ + WQY++G D + +
Sbjct: 341 NRGRQLVASCLVHELGLDWRYGAAYFETQLVDYDVGSNWGNWQYLAGVGADPRGSRQFNL 400
Query: 412 PEIQGSKFDPEGEYVRQW 429
E Q +DP+GE+V +W
Sbjct: 401 -EKQAHTYDPKGEFVAKW 417
>TIGR_CMR|VC_1814 [details] [associations]
symbol:VC_1814 "RNA-binding cryptochrome Cry1" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 GO:GO:0006355 GO:GO:0003677
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0006281 GO:GO:0006351
GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 PIR:B82155
RefSeq:NP_231448.1 ProteinModelPortal:Q9KR33 DNASU:2613694
GeneID:2613694 KEGG:vch:VC1814 PATRIC:20082676 KO:K01669
OMA:YWLIFEL ProtClustDB:CLSK874544 GO:GO:0003904 InterPro:IPR014133
TIGRFAMs:TIGR02765 Uniprot:Q9KR33
Length = 461
Score = 239 (89.2 bits), Expect = 4.6e-17, P = 4.6e-17
Identities = 113/438 (25%), Positives = 185/438 (42%)
Query: 7 IVWFRRDLRIEDNPALAAAARDGSVFPVYTWCPKEEGQFYPGRVSRW-WLKQSLSYLGQS 65
+ WF DLR+ DNP L A++ + +C F + W + +L Q+
Sbjct: 7 LYWFTNDLRVNDNPLLEQASQQVDRL-ICLYCYPSITPFLARYAQQTQWGEAKKRFLNQT 65
Query: 66 LKSLGAELVLFKTESTLAALLECISAIK--ATKVVFNHLY-DPVSLVRDHSIKEKLVELG 122
L L L + + LL A++ T+V +Y D V+ + ++ +
Sbjct: 66 LADLDHSLSTLGQKLWVTPLLP-YQALRHLLTQVEITDIYVDAVAGSDERQAIARIHQDF 124
Query: 123 ISVQSYNG---DLLYEPWEIYDERGHAFTTFDAYWDKCLQMQMEPASILPPWRLVQAAGT 179
SV + LL EP + +TF + + Q+E S+ P
Sbjct: 125 SSVHIHQQALHSLLSEPQLPFALEALP-STFTQF-----RKQVETISLSAPMGYPHVLPP 178
Query: 180 ID-GCSIEDLGLEDESEKSSNALLGRGWSPGWSNADKVLTEFVEQHLLRYYKNRQKLGGN 238
I+ G + + + E S A +G G G ++ + + RY + R L G
Sbjct: 179 IEQGWQLPLMDIVTEPNHS--AFVG-GEQAGLTHCQNYFSSLLPS---RYKETRNGLDGM 232
Query: 239 STSL-LSPYLHFGELSVRKVFQCLWMKQILWAKEEN-----FEGKESVTFFLRAMGLREY 292
S SP+L G +S + ++ L + + ++ FE F+ A R Y
Sbjct: 233 DYSTKFSPWLALGAVSPKTIYAMLQRYEAVHGANDSTYWIFFELLWREYFYWYA---RRY 289
Query: 293 SRYLCFNFPFTHER-PLLSNLKYFPWHADLGNFKAWRQGRTGYPLVDAGMRELWATGWIH 351
L F F E+ PL S ++A F W+ G T +P+V+A MR+L TG++
Sbjct: 290 GAKL-FRFSGIGEKKPLTS------FYAQ--RFLQWKHGETPFPIVNACMRQLNQTGYMS 340
Query: 352 NRIRVIVSSFAVKVLLLPWRWGMKYFWDTLLDADLECDILGWQYISGSLPDGHELERLDS 411
NR R +V+S V L L WR+G YF L+D D+ + WQY++G D + +
Sbjct: 341 NRGRQLVASCLVHELGLDWRYGAAYFETQLVDYDVGSNWGNWQYLAGVGADPRGSRQFNL 400
Query: 412 PEIQGSKFDPEGEYVRQW 429
E Q +DP+GE+V +W
Sbjct: 401 -EKQAHTYDPKGEFVAKW 417
>TAIR|locus:2061961 [details] [associations]
symbol:PHR2 "photolyase/blue-light receptor 2"
species:3702 "Arabidopsis thaliana" [GO:0003913 "DNA photolyase
activity" evidence=IEA;NAS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006281 "DNA repair" evidence=IEA;ISS] [GO:0000023 "maltose
metabolic process" evidence=RCA] [GO:0006655 "phosphatidylglycerol
biosynthetic process" evidence=RCA] [GO:0016117 "carotenoid
biosynthetic process" evidence=RCA] [GO:0019252 "starch
biosynthetic process" evidence=RCA] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=RCA] InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050
Pfam:PF00875 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006281
GO:GO:0009881 GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729
EMBL:AC002535 eggNOG:COG0415 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 PROSITE:PS51645 EMBL:AF053366 EMBL:AY087383
IPI:IPI00547753 PIR:T00425 RefSeq:NP_182281.1 UniGene:At.10721
UniGene:At.69338 ProteinModelPortal:Q8LB72 SMR:Q8LB72 STRING:Q8LB72
PaxDb:Q8LB72 PRIDE:Q8LB72 EnsemblPlants:AT2G47590.1 GeneID:819372
KEGG:ath:AT2G47590 GeneFarm:2668 TAIR:At2g47590
HOGENOM:HOG000240044 InParanoid:Q8LB72 OMA:TNWLMFE PhylomeDB:Q8LB72
ProtClustDB:CLSN2683619 Genevestigator:Q8LB72 GermOnline:AT2G47590
Uniprot:Q8LB72
Length = 447
Score = 167 (63.8 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 73/275 (26%), Positives = 128/275 (46%)
Query: 7 IVWFRRDLRIEDNPALAAAARDG-SVFPVYTWCPKEEGQFYPG--RVSRW---WLKQSLS 60
+VWFR DLR+ DN L +A + SV PVY + P++ G+ G + + +L +S+S
Sbjct: 118 VVWFRNDLRVHDNECLNSANDECVSVLPVYCFDPRDYGKSSSGFDKTGPFRAQFLIESVS 177
Query: 61 YLGQSLKSLGAELVLFKTESTLAALLECISAIKATKVVFNHLYDPVSLVRDHSIKEKLVE 120
L ++L++ G+ LV+ + A L+E I A V + + + I+ + E
Sbjct: 178 ELRKNLQARGSNLVV-RVGKPEAVLVELAKEIGADAVYAHREVSHDEVKAEGKIETAMKE 236
Query: 121 LGISVQSYNGDLLYE----PWEIYDERGHAFTTFDAYWDKCLQMQMEPA-SILPPWRLVQ 175
G+ V+ + G LY P++I D + + A+ DK ++++ + L + +
Sbjct: 237 EGVEVKYFWGSTLYHLDDLPFKIEDLPSN----YGAFKDKVQKLEIRKTIAALDQLKSLP 292
Query: 176 AAGTI---DGCSIEDLGLEDE---SEKSSNALLGRGWSPGWSNADKVLTEFVEQHLLRYY 229
+ G + D S+ DLG+ S++ ++G G + A L F R
Sbjct: 293 SRGDVELGDIPSLLDLGISPTPRTSQEGKPTMVG-----GETEALTRLKSFAADCQARLS 347
Query: 230 KNRQKLGGNS------TSLLSPYLHFGELSVRKVF 258
K QK G NS + +SP+L G +S R +F
Sbjct: 348 KGNQKGGNNSVFGANFSCKISPWLAMGSISPRSMF 382
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.135 0.427 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 644 644 0.00094 120 3 11 22 0.41 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 59
No. of states in DFA: 630 (67 KB)
Total size of DFA: 416 KB (2198 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 56.87u 0.11s 56.98t Elapsed: 00:00:03
Total cpu time: 56.89u 0.12s 57.01t Elapsed: 00:00:03
Start: Tue May 21 02:51:30 2013 End: Tue May 21 02:51:33 2013