Query 006466
Match_columns 644
No_of_seqs 608 out of 4145
Neff 8.4
Searched_HMMs 29240
Date Tue Mar 26 01:46:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006466.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006466hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2gmh_A Electron transfer flavo 100.0 2E-95 7E-100 823.5 47.8 539 101-644 29-584 (584)
2 3oz2_A Digeranylgeranylglycero 100.0 9E-35 3.1E-39 311.7 32.3 339 107-485 4-350 (397)
3 3cgv_A Geranylgeranyl reductas 100.0 6.8E-31 2.3E-35 282.4 32.1 339 107-485 4-350 (397)
4 3atr_A Conserved archaeal prot 100.0 2E-30 6.8E-35 284.6 28.3 343 105-486 4-356 (453)
5 3rp8_A Flavoprotein monooxygen 100.0 1.5E-29 5.3E-34 273.5 26.6 336 105-487 21-372 (407)
6 3e1t_A Halogenase; flavoprotei 100.0 9.8E-29 3.3E-33 275.2 28.4 328 106-469 6-354 (512)
7 3nix_A Flavoprotein/dehydrogen 100.0 1.8E-28 6.1E-33 266.0 28.0 324 106-468 4-343 (421)
8 2qa1_A PGAE, polyketide oxygen 100.0 4.6E-27 1.6E-31 260.5 34.4 336 104-486 8-350 (500)
9 2qa2_A CABE, polyketide oxygen 100.0 5.6E-27 1.9E-31 259.8 34.8 335 105-486 10-351 (499)
10 1k0i_A P-hydroxybenzoate hydro 100.0 7.5E-28 2.6E-32 258.9 24.3 340 106-486 1-351 (394)
11 3alj_A 2-methyl-3-hydroxypyrid 100.0 1.4E-27 4.6E-32 255.8 24.7 324 107-478 11-343 (379)
12 3fmw_A Oxygenase; mithramycin, 100.0 3.8E-27 1.3E-31 264.8 28.0 336 105-487 47-396 (570)
13 1pn0_A Phenol 2-monooxygenase; 100.0 9.6E-27 3.3E-31 266.1 31.2 353 106-486 7-424 (665)
14 2x3n_A Probable FAD-dependent 100.0 1.3E-27 4.5E-32 257.6 21.8 331 107-486 6-360 (399)
15 3ihg_A RDME; flavoenzyme, anth 100.0 8.8E-27 3E-31 260.9 29.2 332 106-481 4-369 (535)
16 3c96_A Flavin-containing monoo 100.0 1.8E-26 6.3E-31 249.7 29.8 334 106-479 3-366 (410)
17 2dkh_A 3-hydroxybenzoate hydro 100.0 2.7E-26 9.2E-31 261.8 30.6 345 106-486 31-415 (639)
18 4hb9_A Similarities with proba 100.0 5.7E-27 1.9E-31 252.6 23.4 333 108-480 2-379 (412)
19 3i3l_A Alkylhalidase CMLS; fla 99.9 1.3E-26 4.4E-31 261.0 24.4 325 105-469 21-366 (591)
20 2vou_A 2,6-dihydroxypyridine h 99.9 1.1E-25 3.8E-30 242.4 27.8 324 106-486 4-369 (397)
21 2xdo_A TETX2 protein; tetracyc 99.9 1.1E-25 3.8E-30 242.5 24.0 319 106-480 25-380 (398)
22 2r0c_A REBC; flavin adenine di 99.9 1.7E-24 5.8E-29 242.8 27.2 331 106-485 25-381 (549)
23 3c4a_A Probable tryptophan hyd 99.9 1.1E-24 3.7E-29 233.4 18.0 318 108-485 1-331 (381)
24 2weu_A Tryptophan 5-halogenase 99.9 1.7E-23 5.9E-28 232.9 27.3 221 205-469 166-392 (511)
25 2aqj_A Tryptophan halogenase, 99.9 4.8E-23 1.7E-27 230.7 25.9 220 205-469 158-384 (538)
26 2pyx_A Tryptophan halogenase; 99.9 3E-23 1E-27 231.7 22.7 227 206-469 169-400 (526)
27 2e4g_A Tryptophan halogenase; 99.9 1.9E-22 6.5E-27 226.3 27.1 225 206-469 188-415 (550)
28 3ihm_A Styrene monooxygenase A 99.8 5.5E-20 1.9E-24 200.0 22.5 312 106-467 21-360 (430)
29 2bry_A NEDD9 interacting prote 99.7 3.4E-16 1.2E-20 173.1 21.1 144 105-289 90-234 (497)
30 1ryi_A Glycine oxidase; flavop 99.7 3.2E-15 1.1E-19 159.3 19.8 290 105-452 15-362 (382)
31 1yvv_A Amine oxidase, flavin-c 99.6 2.1E-14 7.1E-19 150.1 22.1 148 107-288 2-165 (336)
32 1y56_B Sarcosine oxidase; dehy 99.6 5.6E-14 1.9E-18 149.8 24.6 291 106-452 4-355 (382)
33 2gag_B Heterotetrameric sarcos 99.6 6.3E-14 2.2E-18 150.4 24.6 197 207-452 169-375 (405)
34 3dme_A Conserved exported prot 99.6 6.7E-14 2.3E-18 147.8 21.4 170 106-298 3-220 (369)
35 3nyc_A D-arginine dehydrogenas 99.6 2.2E-13 7.5E-18 144.7 24.3 293 105-451 7-357 (381)
36 3pvc_A TRNA 5-methylaminomethy 99.5 6.8E-14 2.3E-18 160.9 17.7 158 106-286 263-470 (689)
37 3ps9_A TRNA 5-methylaminomethy 99.5 6.1E-14 2.1E-18 161.0 17.2 157 107-286 272-474 (676)
38 2gf3_A MSOX, monomeric sarcosi 99.5 1E-12 3.5E-17 140.1 22.1 70 206-296 144-213 (389)
39 3da1_A Glycerol-3-phosphate de 99.5 4.7E-12 1.6E-16 141.8 26.8 217 208-453 166-392 (561)
40 2qcu_A Aerobic glycerol-3-phos 99.5 1.1E-11 3.9E-16 137.1 27.5 216 207-453 144-373 (501)
41 4dgk_A Phytoene dehydrogenase; 99.4 1.6E-11 5.5E-16 135.6 27.3 62 212-289 221-282 (501)
42 3jsk_A Cypbp37 protein; octame 99.4 7.7E-13 2.6E-17 137.4 15.0 158 106-295 78-261 (344)
43 3axb_A Putative oxidoreductase 99.4 3.5E-12 1.2E-16 138.9 20.9 74 206-298 175-264 (448)
44 2oln_A NIKD protein; flavoprot 99.4 5.3E-12 1.8E-16 135.2 21.8 72 206-298 147-218 (397)
45 1y0p_A Fumarate reductase flav 99.4 6.1E-13 2.1E-17 149.7 14.3 197 105-320 124-354 (571)
46 1qo8_A Flavocytochrome C3 fuma 99.4 9.5E-13 3.3E-17 147.9 15.5 197 104-319 118-348 (566)
47 4at0_A 3-ketosteroid-delta4-5a 99.4 3.1E-12 1E-16 141.9 19.2 95 213-320 203-301 (510)
48 2i0z_A NAD(FAD)-utilizing dehy 99.4 1.8E-12 6E-17 141.5 14.9 169 105-299 24-212 (447)
49 3kkj_A Amine oxidase, flavin-c 99.4 1.7E-12 5.8E-17 129.4 12.9 41 106-152 1-41 (336)
50 3dje_A Fructosyl amine: oxygen 99.4 4.8E-12 1.7E-16 137.4 17.3 159 106-286 5-222 (438)
51 3v76_A Flavoprotein; structura 99.4 6.9E-12 2.4E-16 135.2 17.3 158 105-299 25-208 (417)
52 1rp0_A ARA6, thiazole biosynth 99.4 4.9E-12 1.7E-16 129.3 15.4 146 106-291 38-197 (284)
53 3nlc_A Uncharacterized protein 99.4 4.7E-12 1.6E-16 140.5 16.1 164 105-313 105-301 (549)
54 3c4n_A Uncharacterized protein 99.4 2.1E-11 7.3E-16 131.1 20.7 157 106-285 35-236 (405)
55 2cul_A Glucose-inhibited divis 99.3 3.4E-12 1.2E-16 126.5 11.9 126 106-288 2-128 (232)
56 2gjc_A Thiazole biosynthetic e 99.3 1E-11 3.4E-16 128.3 15.6 158 105-294 63-248 (326)
57 2gqf_A Hypothetical protein HI 99.3 2E-11 7E-16 131.0 17.5 157 106-299 3-189 (401)
58 1d4d_A Flavocytochrome C fumar 99.3 1.4E-11 4.8E-16 138.4 16.9 196 106-320 125-354 (572)
59 4a9w_A Monooxygenase; baeyer-v 99.3 1.1E-11 3.6E-16 130.1 13.2 129 107-285 3-132 (357)
60 3ces_A MNMG, tRNA uridine 5-ca 99.3 8.6E-12 2.9E-16 139.6 12.9 149 106-286 27-182 (651)
61 3ka7_A Oxidoreductase; structu 99.3 3.1E-10 1E-14 122.5 24.1 58 212-286 196-253 (425)
62 3i6d_A Protoporphyrinogen oxid 99.3 1.1E-10 3.8E-15 127.5 20.4 47 107-153 5-51 (470)
63 3cp8_A TRNA uridine 5-carboxym 99.3 1.9E-11 6.6E-16 136.7 14.2 153 104-285 18-174 (641)
64 2zxi_A TRNA uridine 5-carboxym 99.3 1.8E-11 6.2E-16 136.4 13.8 150 106-286 26-181 (637)
65 2uzz_A N-methyl-L-tryptophan o 99.3 2E-11 6.9E-16 129.2 13.0 62 206-285 143-204 (372)
66 3nrn_A Uncharacterized protein 99.3 4.6E-10 1.6E-14 121.1 23.7 55 212-285 189-243 (421)
67 2wdq_A Succinate dehydrogenase 99.3 5.8E-11 2E-15 133.6 16.7 90 211-320 142-231 (588)
68 2h88_A Succinate dehydrogenase 99.2 9.5E-11 3.3E-15 132.2 17.2 188 104-320 15-242 (621)
69 3gwf_A Cyclohexanone monooxyge 99.2 5.7E-11 2E-15 132.3 14.4 134 106-285 7-147 (540)
70 3ab1_A Ferredoxin--NADP reduct 99.2 4.4E-11 1.5E-15 126.2 12.6 120 106-286 13-132 (360)
71 1c0p_A D-amino acid oxidase; a 99.2 2.1E-10 7E-15 121.3 17.8 37 105-147 4-40 (363)
72 2ywl_A Thioredoxin reductase r 99.2 5.8E-11 2E-15 112.4 12.0 113 108-289 2-114 (180)
73 3k7m_X 6-hydroxy-L-nicotine ox 99.2 1.2E-09 4.3E-14 117.9 23.3 40 108-153 2-41 (431)
74 1pj5_A N,N-dimethylglycine oxi 99.2 8.3E-11 2.9E-15 138.0 15.0 167 106-298 3-217 (830)
75 2rgh_A Alpha-glycerophosphate 99.2 2.8E-09 9.6E-14 119.6 26.4 75 208-296 184-258 (571)
76 4fk1_A Putative thioredoxin re 99.2 6.4E-11 2.2E-15 122.1 11.8 115 105-286 4-118 (304)
77 3gyx_A Adenylylsulfate reducta 99.2 1.7E-10 5.8E-15 131.0 15.9 171 105-287 20-235 (662)
78 3nks_A Protoporphyrinogen oxid 99.2 1.6E-10 5.4E-15 126.7 15.1 55 213-284 235-289 (477)
79 2ivd_A PPO, PPOX, protoporphyr 99.2 7.7E-10 2.6E-14 121.3 20.2 42 106-153 15-56 (478)
80 2zbw_A Thioredoxin reductase; 99.2 8.7E-11 3E-15 122.5 11.9 119 106-286 4-122 (335)
81 4ap3_A Steroid monooxygenase; 99.2 1.4E-10 4.7E-15 129.5 14.2 134 106-285 20-159 (549)
82 1w4x_A Phenylacetone monooxyge 99.2 1.8E-10 6.1E-15 128.7 15.1 139 106-286 15-155 (542)
83 3uox_A Otemo; baeyer-villiger 99.2 7.2E-11 2.5E-15 131.7 11.6 137 106-285 8-147 (545)
84 3lzw_A Ferredoxin--NADP reduct 99.2 9.3E-11 3.2E-15 121.7 11.5 118 106-285 6-123 (332)
85 1s3e_A Amine oxidase [flavin-c 99.1 4.8E-09 1.6E-13 116.4 25.2 42 106-153 3-44 (520)
86 2xve_A Flavin-containing monoo 99.1 2.6E-10 8.8E-15 124.8 14.3 155 107-285 2-166 (464)
87 1kf6_A Fumarate reductase flav 99.1 3.7E-10 1.3E-14 127.3 15.9 67 211-288 133-200 (602)
88 3f8d_A Thioredoxin reductase ( 99.1 2.6E-10 8.8E-15 117.8 13.2 114 105-286 13-126 (323)
89 2bs2_A Quinol-fumarate reducta 99.1 6.6E-11 2.3E-15 134.5 9.3 89 211-320 157-245 (660)
90 4a5l_A Thioredoxin reductase; 99.1 8.2E-11 2.8E-15 121.4 9.0 118 107-285 4-121 (314)
91 1jnr_A Adenylylsulfate reducta 99.1 3E-10 1E-14 129.3 14.3 165 105-286 20-219 (643)
92 2vvm_A Monoamine oxidase N; FA 99.1 2.1E-09 7.1E-14 118.5 20.1 57 212-285 255-312 (495)
93 2e5v_A L-aspartate oxidase; ar 99.1 6.6E-10 2.2E-14 121.8 15.2 146 109-288 1-179 (472)
94 3g3e_A D-amino-acid oxidase; F 99.1 8.4E-10 2.9E-14 116.0 15.3 149 108-286 1-187 (351)
95 2q7v_A Thioredoxin reductase; 99.1 4.2E-10 1.4E-14 116.8 12.3 116 106-286 7-124 (325)
96 4gcm_A TRXR, thioredoxin reduc 99.1 4.3E-10 1.5E-14 116.1 12.0 112 106-285 5-116 (312)
97 3fbs_A Oxidoreductase; structu 99.1 3.1E-10 1.1E-14 115.7 10.8 111 107-286 2-113 (297)
98 2gv8_A Monooxygenase; FMO, FAD 99.1 6.4E-10 2.2E-14 121.1 13.9 162 106-286 5-178 (447)
99 3fpz_A Thiazole biosynthetic e 99.1 4.1E-10 1.4E-14 117.3 11.6 53 105-161 63-115 (326)
100 2q0l_A TRXR, thioredoxin reduc 99.1 5.9E-10 2E-14 114.8 12.5 113 108-286 2-115 (311)
101 1chu_A Protein (L-aspartate ox 99.1 4.4E-10 1.5E-14 125.2 12.3 90 212-321 138-234 (540)
102 3d1c_A Flavin-containing putat 99.1 3.7E-10 1.3E-14 119.3 10.9 135 107-285 4-143 (369)
103 1vdc_A NTR, NADPH dependent th 99.1 3.7E-10 1.3E-14 117.6 10.6 115 106-286 7-125 (333)
104 3qj4_A Renalase; FAD/NAD(P)-bi 99.1 7.4E-10 2.5E-14 116.0 12.6 138 108-283 2-163 (342)
105 3itj_A Thioredoxin reductase 1 99.0 5E-10 1.7E-14 116.5 11.0 120 105-286 20-143 (338)
106 1fl2_A Alkyl hydroperoxide red 99.0 4.7E-10 1.6E-14 115.5 10.4 115 107-286 1-116 (310)
107 3cty_A Thioredoxin reductase; 99.0 6.7E-10 2.3E-14 115.0 11.5 115 104-286 13-127 (319)
108 1mo9_A ORF3; nucleotide bindin 99.0 4.4E-09 1.5E-13 116.9 18.2 71 212-298 255-328 (523)
109 2a87_A TRXR, TR, thioredoxin r 99.0 1.4E-09 4.8E-14 113.5 12.2 115 105-286 12-127 (335)
110 3s5w_A L-ornithine 5-monooxyge 99.0 3E-10 1E-14 124.2 7.3 151 106-285 29-192 (463)
111 1v59_A Dihydrolipoamide dehydr 99.0 6.2E-10 2.1E-14 122.3 9.4 148 106-285 4-157 (478)
112 1trb_A Thioredoxin reductase; 99.0 1.5E-09 5E-14 112.3 11.2 114 106-286 4-117 (320)
113 4b1b_A TRXR, thioredoxin reduc 99.0 1.4E-10 4.7E-15 128.9 3.6 146 107-286 42-198 (542)
114 3lov_A Protoporphyrinogen oxid 99.0 6.4E-08 2.2E-12 105.9 24.6 40 107-152 4-45 (475)
115 3l8k_A Dihydrolipoyl dehydroge 99.0 4.2E-10 1.4E-14 123.3 6.6 132 106-285 3-144 (466)
116 3urh_A Dihydrolipoyl dehydroge 99.0 4.5E-10 1.6E-14 123.8 6.5 54 105-164 23-76 (491)
117 2a8x_A Dihydrolipoyl dehydroge 99.0 3.5E-10 1.2E-14 123.8 5.5 143 107-286 3-147 (464)
118 1ojt_A Surface protein; redox- 99.0 6.9E-10 2.4E-14 122.1 7.8 53 105-163 4-56 (482)
119 1hyu_A AHPF, alkyl hydroperoxi 99.0 1.6E-09 5.6E-14 120.2 10.8 117 105-286 210-327 (521)
120 1dxl_A Dihydrolipoamide dehydr 98.9 2.6E-09 8.8E-14 117.0 11.5 141 107-287 6-153 (470)
121 2bcg_G Secretory pathway GDP d 98.9 1.3E-08 4.5E-13 110.9 16.4 58 212-285 242-300 (453)
122 1ebd_A E3BD, dihydrolipoamide 98.9 2.3E-09 7.7E-14 117.0 9.5 135 107-286 3-146 (455)
123 1zmd_A Dihydrolipoyl dehydroge 98.9 3.6E-09 1.2E-13 116.1 10.5 52 106-163 5-56 (474)
124 3r9u_A Thioredoxin reductase; 98.9 9.8E-09 3.3E-13 105.5 12.3 114 107-285 4-118 (315)
125 3dgz_A Thioredoxin reductase 2 98.9 3.5E-09 1.2E-13 116.6 9.2 53 105-163 4-64 (488)
126 2qae_A Lipoamide, dihydrolipoy 98.9 5.4E-09 1.8E-13 114.5 10.5 51 107-163 2-52 (468)
127 3qfa_A Thioredoxin reductase 1 98.8 3.4E-09 1.2E-13 117.6 8.3 52 106-163 31-90 (519)
128 2hqm_A GR, grase, glutathione 98.8 3.4E-09 1.2E-13 116.4 8.2 52 105-163 9-60 (479)
129 3p1w_A Rabgdi protein; GDI RAB 98.8 2E-08 7E-13 109.1 13.8 58 212-284 256-313 (475)
130 3lad_A Dihydrolipoamide dehydr 98.8 1.4E-09 4.9E-14 119.3 4.8 52 106-163 2-59 (476)
131 4gde_A UDP-galactopyranose mut 98.8 1.4E-08 4.7E-13 112.2 12.8 48 101-153 4-51 (513)
132 4b63_A L-ornithine N5 monooxyg 98.8 5.3E-09 1.8E-13 115.5 9.3 157 106-284 38-213 (501)
133 2yqu_A 2-oxoglutarate dehydrog 98.8 5.6E-09 1.9E-13 113.9 9.1 50 108-163 2-51 (455)
134 1xdi_A RV3303C-LPDA; reductase 98.8 9E-09 3.1E-13 113.7 10.8 146 107-286 2-157 (499)
135 3dk9_A Grase, GR, glutathione 98.8 2.3E-09 7.8E-14 117.8 5.1 52 106-164 19-70 (478)
136 3o0h_A Glutathione reductase; 98.8 1E-08 3.5E-13 112.8 10.2 138 107-286 26-167 (484)
137 4dna_A Probable glutathione re 98.8 1.2E-09 4E-14 119.6 2.1 138 107-286 5-146 (463)
138 1zk7_A HGII, reductase, mercur 98.8 1.7E-08 5.7E-13 110.5 11.2 51 106-163 3-53 (467)
139 1lvl_A Dihydrolipoamide dehydr 98.8 3.6E-08 1.2E-12 107.6 12.7 51 106-163 4-54 (458)
140 1q1r_A Putidaredoxin reductase 98.8 7.8E-09 2.7E-13 111.9 7.2 111 106-286 3-115 (431)
141 3fg2_P Putative rubredoxin red 98.7 3.1E-08 1.1E-12 106.2 11.8 111 107-298 142-252 (404)
142 2r9z_A Glutathione amide reduc 98.7 1.8E-08 6.1E-13 110.2 10.0 51 106-163 3-53 (463)
143 3ic9_A Dihydrolipoamide dehydr 98.7 2E-08 7E-13 110.6 10.5 52 107-165 8-59 (492)
144 2eq6_A Pyruvate dehydrogenase 98.7 2.2E-08 7.4E-13 109.5 10.7 50 107-163 6-55 (464)
145 3dgh_A TRXR-1, thioredoxin red 98.7 1.2E-08 4.1E-13 112.2 8.3 52 106-163 8-68 (483)
146 3oc4_A Oxidoreductase, pyridin 98.7 2.5E-08 8.4E-13 108.7 10.3 114 108-286 3-116 (452)
147 3lxd_A FAD-dependent pyridine 98.7 4.6E-08 1.6E-12 105.3 12.1 111 107-298 152-262 (415)
148 1ges_A Glutathione reductase; 98.7 1.7E-08 5.8E-13 109.9 8.8 51 106-163 3-53 (450)
149 1fec_A Trypanothione reductase 98.7 1.7E-08 6E-13 111.1 8.6 51 107-163 3-62 (490)
150 1onf_A GR, grase, glutathione 98.7 1.9E-08 6.4E-13 111.1 8.5 51 106-163 1-51 (500)
151 2wpf_A Trypanothione reductase 98.7 2.2E-08 7.4E-13 110.4 9.0 53 105-163 5-66 (495)
152 2bc0_A NADH oxidase; flavoprot 98.7 3E-08 1E-12 109.2 8.5 114 106-286 34-150 (490)
153 3kd9_A Coenzyme A disulfide re 98.7 4.7E-08 1.6E-12 106.3 9.7 39 107-149 3-41 (449)
154 3klj_A NAD(FAD)-dependent dehy 98.7 3.5E-08 1.2E-12 105.1 8.5 108 107-285 9-116 (385)
155 3lxd_A FAD-dependent pyridine 98.6 2.8E-08 9.4E-13 107.0 6.4 110 106-285 8-119 (415)
156 1d5t_A Guanine nucleotide diss 98.6 4E-07 1.4E-11 98.5 15.5 58 212-286 234-291 (433)
157 3ef6_A Toluene 1,2-dioxygenase 98.6 6.6E-08 2.3E-12 103.9 9.1 110 107-298 143-252 (410)
158 3ics_A Coenzyme A-disulfide re 98.6 7.4E-08 2.5E-12 108.5 9.9 118 106-285 35-152 (588)
159 1rsg_A FMS1 protein; FAD bindi 98.6 2.9E-07 1E-11 101.9 14.4 41 106-152 7-48 (516)
160 2gqw_A Ferredoxin reductase; f 98.6 5.9E-08 2E-12 104.2 8.0 107 106-286 6-114 (408)
161 3sx6_A Sulfide-quinone reducta 98.6 5.2E-08 1.8E-12 105.6 7.6 106 108-286 5-113 (437)
162 2yg5_A Putrescine oxidase; oxi 98.6 3.1E-07 1E-11 99.8 13.6 41 106-152 4-44 (453)
163 3pl8_A Pyranose 2-oxidase; sub 98.6 4.2E-07 1.4E-11 102.8 14.6 42 104-151 43-84 (623)
164 3iwa_A FAD-dependent pyridine 98.6 1E-07 3.6E-12 104.3 9.4 39 107-149 3-41 (472)
165 3qvp_A Glucose oxidase; oxidor 98.6 1.3E-07 4.4E-12 105.8 10.2 71 215-298 230-304 (583)
166 3q9t_A Choline dehydrogenase a 98.6 7.7E-08 2.6E-12 107.6 8.3 51 224-285 218-270 (577)
167 3h28_A Sulfide-quinone reducta 98.6 9E-08 3.1E-12 103.5 8.4 109 107-286 2-110 (430)
168 3hyw_A Sulfide-quinone reducta 98.6 3.3E-08 1.1E-12 107.0 4.8 107 108-285 3-109 (430)
169 3k30_A Histamine dehydrogenase 98.5 1.7E-07 5.9E-12 107.5 10.7 43 105-153 389-431 (690)
170 2v3a_A Rubredoxin reductase; a 98.5 3.7E-07 1.3E-11 97.0 12.6 110 107-298 145-254 (384)
171 1xhc_A NADH oxidase /nitrite r 98.5 8.9E-08 3.1E-12 101.3 7.4 35 107-148 8-42 (367)
172 3ef6_A Toluene 1,2-dioxygenase 98.5 5.3E-08 1.8E-12 104.6 5.1 107 108-285 3-111 (410)
173 2gag_A Heterotetrameric sarcos 98.5 2.6E-07 9E-12 109.7 11.5 124 105-285 126-253 (965)
174 3h8l_A NADH oxidase; membrane 98.5 3.8E-08 1.3E-12 105.6 4.0 110 108-286 2-114 (409)
175 1q1r_A Putidaredoxin reductase 98.5 7E-07 2.4E-11 96.5 13.9 112 107-298 149-261 (431)
176 3cgb_A Pyridine nucleotide-dis 98.5 2.2E-07 7.7E-12 101.9 10.1 38 108-149 37-74 (480)
177 2v3a_A Rubredoxin reductase; a 98.5 1.4E-07 4.8E-12 100.3 7.9 109 106-286 3-114 (384)
178 2cdu_A NADPH oxidase; flavoenz 98.5 2.5E-07 8.5E-12 100.7 9.6 118 108-286 1-118 (452)
179 1ges_A Glutathione reductase; 98.5 7.4E-07 2.5E-11 96.9 13.1 101 107-287 167-267 (450)
180 1nhp_A NADH peroxidase; oxidor 98.5 2.7E-07 9.3E-12 100.2 9.6 38 108-149 1-38 (447)
181 2hqm_A GR, grase, glutathione 98.5 4.3E-07 1.5E-11 99.6 11.1 102 107-287 185-287 (479)
182 2yqu_A 2-oxoglutarate dehydrog 98.5 5.3E-07 1.8E-11 98.2 11.3 100 107-287 167-266 (455)
183 4gut_A Lysine-specific histone 98.5 6.3E-07 2.2E-11 103.5 12.4 39 107-151 336-374 (776)
184 2vdc_G Glutamate synthase [NAD 98.5 1.3E-07 4.5E-12 102.9 6.3 39 106-150 121-159 (456)
185 3ntd_A FAD-dependent pyridine 98.5 2.7E-07 9.1E-12 103.4 9.1 116 108-285 2-117 (565)
186 3fg2_P Putative rubredoxin red 98.4 1.3E-07 4.5E-12 101.3 5.9 107 108-285 2-110 (404)
187 2x8g_A Thioredoxin glutathione 98.4 3.6E-07 1.2E-11 103.1 9.3 52 105-162 105-164 (598)
188 1y56_A Hypothetical protein PH 98.4 3E-07 1E-11 101.2 7.8 114 105-285 106-219 (493)
189 3oc4_A Oxidoreductase, pyridin 98.4 1.8E-06 6.2E-11 93.9 13.8 99 107-286 147-245 (452)
190 1v59_A Dihydrolipoamide dehydr 98.4 1.3E-06 4.5E-11 95.6 12.5 106 107-286 183-288 (478)
191 2r9z_A Glutathione amide reduc 98.4 1.6E-06 5.6E-11 94.5 12.8 98 108-286 167-265 (463)
192 1m6i_A Programmed cell death p 98.4 1.9E-07 6.6E-12 102.8 5.3 41 105-149 9-49 (493)
193 1nhp_A NADH peroxidase; oxidor 98.4 9.7E-07 3.3E-11 95.9 10.5 99 107-286 149-247 (447)
194 1onf_A GR, grase, glutathione 98.4 3.1E-06 1E-10 93.3 14.6 100 107-286 176-276 (500)
195 2gqw_A Ferredoxin reductase; f 98.3 3.2E-06 1.1E-10 90.6 13.8 106 107-298 145-250 (408)
196 4eqs_A Coenzyme A disulfide re 98.3 5.6E-07 1.9E-11 97.5 7.2 37 109-149 2-38 (437)
197 1ebd_A E3BD, dihydrolipoamide 98.3 2.3E-06 7.8E-11 93.1 11.3 102 107-286 170-271 (455)
198 1trb_A Thioredoxin reductase; 98.3 5.2E-06 1.8E-10 85.3 13.3 102 107-285 145-247 (320)
199 2eq6_A Pyruvate dehydrogenase 98.3 2.9E-06 9.7E-11 92.6 11.8 105 107-287 169-273 (464)
200 2cdu_A NADPH oxidase; flavoenz 98.3 3.9E-06 1.3E-10 91.2 12.7 101 107-287 149-249 (452)
201 1ps9_A 2,4-dienoyl-COA reducta 98.3 6.7E-07 2.3E-11 102.2 6.6 40 106-151 372-411 (671)
202 3cgb_A Pyridine nucleotide-dis 98.3 3.1E-06 1.1E-10 92.8 11.7 98 107-286 186-283 (480)
203 3fim_B ARYL-alcohol oxidase; A 98.3 4.9E-07 1.7E-11 100.8 5.2 70 215-297 211-286 (566)
204 1xhc_A NADH oxidase /nitrite r 98.3 4E-06 1.4E-10 88.5 12.0 102 108-298 144-245 (367)
205 3vrd_B FCCB subunit, flavocyto 98.3 3E-06 1E-10 90.5 11.0 36 108-147 3-38 (401)
206 1xdi_A RV3303C-LPDA; reductase 98.3 4.7E-06 1.6E-10 91.8 12.9 99 107-286 182-280 (499)
207 3ntd_A FAD-dependent pyridine 98.2 5.2E-06 1.8E-10 92.8 13.2 109 108-298 152-278 (565)
208 1zmd_A Dihydrolipoyl dehydroge 98.2 6.5E-06 2.2E-10 90.0 13.7 107 107-287 178-284 (474)
209 1lvl_A Dihydrolipoamide dehydr 98.2 2.8E-06 9.6E-11 92.5 10.3 99 107-286 171-269 (458)
210 2bc0_A NADH oxidase; flavoprot 98.2 4.7E-06 1.6E-10 91.6 11.8 99 107-286 194-292 (490)
211 1gte_A Dihydropyrimidine dehyd 98.2 6.8E-07 2.3E-11 106.8 5.4 57 565-634 948-1008(1025)
212 1m6i_A Programmed cell death p 98.2 7.2E-06 2.5E-10 90.1 13.1 104 107-286 180-283 (493)
213 1cjc_A Protein (adrenodoxin re 98.2 5.6E-07 1.9E-11 98.1 4.0 38 107-150 6-45 (460)
214 1jb0_C Photosystem I iron-sulf 98.2 2.2E-07 7.5E-12 75.1 0.4 70 560-639 1-73 (80)
215 2qae_A Lipoamide, dihydrolipoy 98.2 7.5E-06 2.6E-10 89.3 12.8 104 107-287 174-278 (468)
216 2wpf_A Trypanothione reductase 98.2 7.7E-06 2.6E-10 89.9 12.8 103 107-286 191-293 (495)
217 3o0h_A Glutathione reductase; 98.2 6.6E-06 2.3E-10 90.2 12.1 99 107-286 191-289 (484)
218 4dna_A Probable glutathione re 98.2 7.1E-06 2.4E-10 89.4 12.3 99 107-286 170-269 (463)
219 1fec_A Trypanothione reductase 98.2 6.9E-06 2.4E-10 90.2 12.2 103 107-286 187-289 (490)
220 2a8x_A Dihydrolipoyl dehydroge 98.2 1E-05 3.4E-10 88.2 13.3 102 107-286 171-272 (464)
221 3iwa_A FAD-dependent pyridine 98.2 1.4E-05 5E-10 87.1 14.3 112 107-299 159-270 (472)
222 1lqt_A FPRA; NADP+ derivative, 98.2 6.4E-07 2.2E-11 97.5 3.2 44 107-150 3-47 (456)
223 3cty_A Thioredoxin reductase; 98.1 7.1E-06 2.4E-10 84.4 10.4 98 107-285 155-252 (319)
224 1dxl_A Dihydrolipoamide dehydr 98.1 6.1E-06 2.1E-10 90.1 10.4 104 107-286 177-280 (470)
225 1zk7_A HGII, reductase, mercur 98.1 1.5E-05 5.3E-10 86.8 13.4 98 107-287 176-273 (467)
226 1fl2_A Alkyl hydroperoxide red 98.1 1.5E-05 5.2E-10 81.4 12.6 98 107-285 144-242 (310)
227 3ics_A Coenzyme A-disulfide re 98.1 1.3E-05 4.4E-10 90.2 12.9 108 107-299 187-294 (588)
228 3t37_A Probable dehydrogenase; 98.1 3.5E-06 1.2E-10 93.4 8.1 37 106-147 16-52 (526)
229 2zbw_A Thioredoxin reductase; 98.1 1.2E-05 4.1E-10 83.2 11.7 101 107-285 152-252 (335)
230 4eqs_A Coenzyme A disulfide re 98.1 4.5E-06 1.5E-10 90.3 8.8 104 108-298 148-251 (437)
231 4b1b_A TRXR, thioredoxin reduc 98.1 1.5E-05 5.1E-10 88.3 13.0 100 107-288 223-322 (542)
232 3itj_A Thioredoxin reductase 1 98.1 1.3E-05 4.5E-10 82.7 11.8 98 107-285 173-271 (338)
233 3urh_A Dihydrolipoyl dehydroge 98.1 2E-05 6.9E-10 86.5 14.0 105 107-287 198-302 (491)
234 1o94_A Tmadh, trimethylamine d 98.1 1.7E-06 5.8E-11 99.8 5.5 40 106-151 388-427 (729)
235 3dk9_A Grase, GR, glutathione 98.1 1.6E-05 5.5E-10 86.9 13.1 108 107-286 187-294 (478)
236 3ic9_A Dihydrolipoamide dehydr 98.1 1.9E-05 6.5E-10 86.7 13.3 102 107-286 174-275 (492)
237 2jbv_A Choline oxidase; alcoho 98.1 3.2E-06 1.1E-10 94.1 7.2 63 223-297 220-283 (546)
238 3ab1_A Ferredoxin--NADP reduct 98.1 9.6E-06 3.3E-10 85.0 10.3 102 107-286 163-264 (360)
239 3lad_A Dihydrolipoamide dehydr 98.1 2E-05 6.7E-10 86.2 13.1 101 107-286 180-281 (476)
240 7fd1_A FD1, protein (7-Fe ferr 98.1 8.9E-07 3E-11 75.9 1.7 55 566-632 4-58 (106)
241 1ojt_A Surface protein; redox- 98.1 1.2E-05 4E-10 88.2 11.0 103 107-286 185-287 (482)
242 1xer_A Ferredoxin; electron tr 98.1 6.9E-07 2.4E-11 76.0 0.9 64 560-633 36-103 (103)
243 1v0j_A UDP-galactopyranose mut 98.1 3.1E-06 1.1E-10 90.4 6.3 43 106-153 6-48 (399)
244 2b9w_A Putative aminooxidase; 98.1 3.2E-06 1.1E-10 90.8 6.2 42 106-153 5-47 (424)
245 3hdq_A UDP-galactopyranose mut 98.0 4E-06 1.4E-10 89.2 6.1 43 105-153 27-69 (397)
246 3dgh_A TRXR-1, thioredoxin red 98.0 2.3E-05 7.8E-10 85.8 12.2 103 108-286 188-290 (483)
247 2q0l_A TRXR, thioredoxin reduc 98.0 2.2E-05 7.5E-10 80.3 11.4 98 107-285 143-241 (311)
248 2e1m_A L-glutamate oxidase; L- 98.0 4.4E-06 1.5E-10 88.1 5.9 41 106-152 43-84 (376)
249 3f8d_A Thioredoxin reductase ( 98.0 4.8E-05 1.6E-09 77.8 13.3 108 107-298 154-262 (323)
250 4g6h_A Rotenone-insensitive NA 98.0 6.6E-06 2.2E-10 90.6 7.1 36 106-147 41-76 (502)
251 2jae_A L-amino acid oxidase; o 98.0 5.3E-06 1.8E-10 91.0 6.2 41 106-152 10-50 (489)
252 2fdn_A Ferredoxin; electron tr 98.0 3.2E-06 1.1E-10 62.9 2.9 50 567-630 5-54 (55)
253 1vdc_A NTR, NADPH dependent th 98.0 2.7E-05 9.1E-10 80.5 11.0 99 107-285 159-259 (333)
254 1dwl_A Ferredoxin I; electron 98.0 4.8E-06 1.6E-10 62.6 3.7 58 561-631 1-59 (59)
255 1i8t_A UDP-galactopyranose mut 97.9 5.5E-06 1.9E-10 87.5 5.4 40 108-153 2-41 (367)
256 3r9u_A Thioredoxin reductase; 97.9 4.2E-05 1.4E-09 78.0 11.9 98 107-285 147-244 (315)
257 3kd9_A Coenzyme A disulfide re 97.9 4.6E-05 1.6E-09 82.6 12.7 107 108-298 149-255 (449)
258 2q7v_A Thioredoxin reductase; 97.9 3.4E-05 1.2E-09 79.5 11.0 97 107-285 152-249 (325)
259 3dgz_A Thioredoxin reductase 2 97.9 5.2E-05 1.8E-09 83.1 13.0 103 108-286 186-288 (488)
260 1gpe_A Protein (glucose oxidas 97.9 6.3E-06 2.1E-10 92.5 5.5 59 217-286 236-298 (587)
261 1sez_A Protoporphyrinogen oxid 97.9 7.1E-06 2.4E-10 90.2 5.8 41 106-152 12-52 (504)
262 2v2k_A Ferredoxin; iron, trans 97.9 2.7E-06 9.1E-11 72.7 1.7 55 566-632 4-58 (105)
263 3klj_A NAD(FAD)-dependent dehy 97.9 2.7E-06 9.1E-11 90.5 1.8 86 108-286 147-232 (385)
264 4g6h_A Rotenone-insensitive NA 97.9 5E-05 1.7E-09 83.5 11.7 107 108-285 218-332 (502)
265 1bc6_A 7-Fe ferredoxin; electr 97.9 3.7E-06 1.3E-10 67.3 1.9 54 566-631 4-57 (77)
266 1hyu_A AHPF, alkyl hydroperoxi 97.9 6.6E-05 2.3E-09 83.0 12.4 98 107-285 355-453 (521)
267 3eun_A Ferredoxin; electron tr 97.9 4.9E-06 1.7E-10 67.6 2.4 57 565-632 3-62 (82)
268 3d1c_A Flavin-containing putat 97.9 5.4E-05 1.9E-09 79.3 11.1 105 108-286 167-273 (369)
269 3lzw_A Ferredoxin--NADP reduct 97.8 5.1E-05 1.8E-09 78.0 10.2 97 107-285 154-250 (332)
270 2bi7_A UDP-galactopyranose mut 97.8 1.3E-05 4.4E-10 85.2 5.6 41 107-153 3-43 (384)
271 1h98_A Ferredoxin; electron tr 97.8 3.2E-06 1.1E-10 68.0 0.6 55 566-632 4-58 (78)
272 2iid_A L-amino-acid oxidase; f 97.8 1.6E-05 5.3E-10 87.4 6.0 42 105-152 31-72 (498)
273 4dsg_A UDP-galactopyranose mut 97.8 1.9E-05 6.3E-10 86.6 5.8 43 106-154 8-51 (484)
274 3qfa_A Thioredoxin reductase 1 97.8 0.00014 4.7E-09 80.4 12.9 102 108-285 211-315 (519)
275 3s5w_A L-ornithine 5-monooxyge 97.7 0.00017 5.8E-09 78.3 12.5 38 107-148 227-264 (463)
276 3l8k_A Dihydrolipoyl dehydroge 97.7 0.00011 3.9E-09 79.9 10.9 104 107-288 172-275 (466)
277 2a87_A TRXR, TR, thioredoxin r 97.7 5E-05 1.7E-09 78.7 7.7 97 107-285 155-252 (335)
278 2x8g_A Thioredoxin glutathione 97.7 0.00022 7.5E-09 80.2 13.6 100 108-286 287-396 (598)
279 1gte_A Dihydropyrimidine dehyd 97.7 0.00013 4.6E-09 87.1 12.3 110 108-286 333-443 (1025)
280 2vdc_G Glutamate synthase [NAD 97.6 5.8E-05 2E-09 81.9 7.4 110 107-286 264-379 (456)
281 1cjc_A Protein (adrenodoxin re 97.6 0.00021 7.3E-09 77.6 11.8 148 107-285 145-333 (460)
282 3g5s_A Methylenetetrahydrofola 97.6 5.5E-05 1.9E-09 79.1 6.4 36 108-149 2-37 (443)
283 2fgo_A Ferredoxin; allochromat 97.6 2.6E-05 8.9E-10 63.2 3.1 57 565-632 3-62 (82)
284 1b37_A Protein (polyamine oxid 97.6 4.4E-05 1.5E-09 83.2 5.5 40 107-152 4-44 (472)
285 3fbs_A Oxidoreductase; structu 97.6 0.00012 4.2E-09 73.8 8.0 87 107-286 141-227 (297)
286 4a5l_A Thioredoxin reductase; 97.6 0.00037 1.3E-08 71.1 11.6 99 107-285 152-250 (314)
287 1rgv_A Ferredoxin; electron tr 97.6 2.5E-05 8.5E-10 63.0 2.1 56 565-631 3-61 (80)
288 3gyx_B Adenylylsulfate reducta 97.5 2.8E-05 9.6E-10 72.1 2.6 61 566-632 5-65 (166)
289 3i9v_9 NADH-quinone oxidoreduc 97.5 2.3E-05 7.9E-10 73.8 1.6 58 566-632 49-117 (182)
290 2vpz_B NRFC protein; oxidoredu 97.5 3E-05 1E-09 74.0 1.9 57 566-633 54-110 (195)
291 1jnr_B Adenylylsulfate reducta 97.5 3.9E-05 1.3E-09 69.9 2.3 60 566-631 6-65 (150)
292 2gag_A Heterotetrameric sarcos 97.5 0.00019 6.6E-09 85.1 8.8 97 108-286 285-384 (965)
293 2z3y_A Lysine-specific histone 97.4 0.00011 3.8E-09 83.7 5.7 40 106-151 106-145 (662)
294 1rof_A Ferredoxin; electron tr 97.4 2E-05 6.7E-10 59.4 -0.7 56 562-631 3-59 (60)
295 2xag_A Lysine-specific histone 97.3 0.00015 5.2E-09 84.3 6.1 40 106-151 277-316 (852)
296 1kdg_A CDH, cellobiose dehydro 97.3 0.00013 4.4E-09 81.1 5.2 68 218-298 201-272 (546)
297 1dax_A Ferredoxin I; electron 97.3 3E-05 1E-09 59.4 -0.3 54 566-631 7-62 (64)
298 1lqt_A FPRA; NADP+ derivative, 97.3 0.00051 1.7E-08 74.5 9.3 155 107-285 147-326 (456)
299 4gcm_A TRXR, thioredoxin reduc 97.1 0.003 1E-07 64.3 12.5 36 108-149 146-181 (312)
300 1hfe_L Protein (Fe-only hydrog 97.1 6.9E-05 2.4E-09 80.2 0.0 56 561-630 27-83 (421)
301 1kqf_B FDH-N beta S, formate d 97.1 0.00015 5.1E-09 73.7 2.4 56 566-632 96-152 (294)
302 1ti6_B Pyrogallol hydroxytrans 97.1 0.00015 5.2E-09 72.8 2.3 57 566-634 64-120 (274)
303 2zvs_A Uncharacterized ferredo 97.1 0.00011 3.7E-09 59.9 0.8 55 566-631 4-62 (85)
304 1ju2_A HydroxynitrIle lyase; f 97.1 0.00023 7.9E-09 78.9 3.5 66 219-297 201-271 (536)
305 1f2g_A Ferredoxin II; electron 97.0 9.2E-05 3.2E-09 55.3 0.0 52 566-631 5-58 (58)
306 1vg0_A RAB proteins geranylger 97.0 0.00059 2E-08 76.4 6.3 43 104-152 5-47 (650)
307 2ivf_B Ethylbenzene dehydrogen 97.0 0.00018 6.2E-09 74.5 1.6 58 565-632 146-203 (352)
308 1n4w_A CHOD, cholesterol oxida 97.0 0.00051 1.8E-08 75.5 5.3 61 218-286 227-289 (504)
309 3ayj_A Pro-enzyme of L-phenyla 97.0 0.00035 1.2E-08 79.2 3.9 36 107-148 56-100 (721)
310 3gwf_A Cyclohexanone monooxyge 96.9 0.003 1E-07 70.0 11.0 35 107-147 178-212 (540)
311 1q16_B Respiratory nitrate red 96.9 0.0002 6.7E-09 77.5 1.3 58 566-633 180-237 (512)
312 3uox_A Otemo; baeyer-villiger 96.9 0.0029 9.8E-08 70.2 10.7 36 107-148 185-220 (545)
313 1o94_A Tmadh, trimethylamine d 96.9 0.0014 4.8E-08 75.3 8.2 36 107-149 528-565 (729)
314 1coy_A Cholesterol oxidase; ox 96.9 0.00069 2.4E-08 74.5 5.3 61 218-286 232-294 (507)
315 1iqz_A Ferredoxin; iron-sulfer 96.9 0.00022 7.5E-09 57.4 0.9 55 566-634 7-72 (81)
316 4fk1_A Putative thioredoxin re 96.8 0.002 7E-08 65.5 8.1 100 108-298 147-247 (304)
317 3or1_B Sulfite reductase beta; 96.8 0.00013 4.3E-09 77.1 -1.2 57 566-629 214-274 (386)
318 3mm5_B Sulfite reductase, diss 96.8 0.00017 5.8E-09 75.7 -0.4 54 566-629 203-257 (366)
319 2xve_A Flavin-containing monoo 96.7 0.0036 1.2E-07 67.9 9.1 35 107-147 197-231 (464)
320 3h8l_A NADH oxidase; membrane 96.6 0.0058 2E-07 64.9 10.1 53 213-286 219-271 (409)
321 1ps9_A 2,4-dienoyl-COA reducta 96.6 0.0032 1.1E-07 71.7 8.3 52 216-285 577-628 (671)
322 4ap3_A Steroid monooxygenase; 96.6 0.004 1.4E-07 69.0 8.8 35 107-147 191-225 (549)
323 2gv8_A Monooxygenase; FMO, FAD 96.6 0.0027 9.2E-08 68.5 7.0 35 107-147 212-247 (447)
324 3h28_A Sulfide-quinone reducta 96.5 0.0044 1.5E-07 66.4 7.9 54 215-285 203-256 (430)
325 3vrd_B FCCB subunit, flavocyto 96.5 0.036 1.2E-06 58.4 14.9 51 218-285 208-258 (401)
326 1sj1_A Ferredoxin; thermostabi 96.4 0.00046 1.6E-08 52.7 -0.6 53 566-631 7-64 (66)
327 2c42_A Pyruvate-ferredoxin oxi 96.2 0.0015 5.3E-08 78.5 2.8 59 564-631 682-764 (1231)
328 4a9w_A Monooxygenase; baeyer-v 96.2 0.0049 1.7E-07 63.5 6.3 33 107-146 163-195 (357)
329 3mm5_A Sulfite reductase, diss 96.2 0.0012 4.2E-08 69.9 1.5 40 580-627 261-300 (418)
330 3j16_B RLI1P; ribosome recycli 96.2 0.0013 4.5E-08 73.5 1.5 60 560-630 6-72 (608)
331 3sx6_A Sulfide-quinone reducta 96.0 0.017 5.9E-07 61.9 9.5 59 215-285 211-269 (437)
332 1h0h_B Formate dehydrogenase ( 96.0 0.00098 3.3E-08 64.4 -0.6 58 566-633 68-130 (214)
333 3or1_A Sulfite reductase alpha 95.9 0.0018 6.2E-08 68.6 1.3 39 581-627 279-317 (437)
334 4b63_A L-ornithine N5 monooxyg 95.9 0.053 1.8E-06 59.3 13.1 38 107-148 246-283 (501)
335 3c8y_A Iron hydrogenase 1; dit 95.5 0.001 3.6E-08 74.0 -2.7 61 561-631 139-208 (574)
336 2g1u_A Hypothetical protein TM 94.7 0.032 1.1E-06 50.5 5.1 35 107-147 19-53 (155)
337 3bk7_A ABC transporter ATP-bin 94.6 0.011 3.7E-07 66.1 2.1 62 559-628 18-84 (607)
338 1ti6_B Pyrogallol hydroxytrans 94.6 0.011 3.7E-07 59.2 1.9 55 564-631 93-157 (274)
339 3fwz_A Inner membrane protein 94.1 0.049 1.7E-06 48.3 4.9 36 106-147 6-41 (140)
340 3i9v_3 NADH-quinone oxidoreduc 94.0 0.014 4.8E-07 67.4 1.3 58 561-631 173-238 (783)
341 3hyw_A Sulfide-quinone reducta 93.5 0.19 6.4E-06 53.6 9.1 55 215-286 203-257 (430)
342 1id1_A Putative potassium chan 93.5 0.15 5.2E-06 45.7 7.1 33 108-146 4-36 (153)
343 2ivf_B Ethylbenzene dehydrogen 93.5 0.012 4.1E-07 60.9 -0.4 54 565-631 179-238 (352)
344 1w4x_A Phenylacetone monooxyge 93.3 0.36 1.2E-05 53.1 11.2 36 107-148 186-221 (542)
345 2vpz_B NRFC protein; oxidoredu 93.1 0.027 9.2E-07 53.4 1.4 61 564-631 7-78 (195)
346 1lss_A TRK system potassium up 93.0 0.098 3.4E-06 45.7 5.0 33 108-146 5-37 (140)
347 3llv_A Exopolyphosphatase-rela 92.8 0.091 3.1E-06 46.4 4.5 33 108-146 7-39 (141)
348 3ic5_A Putative saccharopine d 92.7 0.11 3.7E-06 43.9 4.7 33 108-146 6-39 (118)
349 2pa8_D DNA-directed RNA polyme 92.3 0.031 1.1E-06 55.6 0.6 42 581-630 178-219 (265)
350 1vg0_A RAB proteins geranylger 92.2 0.28 9.7E-06 54.8 8.3 57 211-282 377-434 (650)
351 1h0h_B Formate dehydrogenase ( 90.9 0.032 1.1E-06 53.7 -1.0 56 562-631 101-164 (214)
352 2hmt_A YUAA protein; RCK, KTN, 90.8 0.2 6.8E-06 43.9 4.4 33 108-146 7-39 (144)
353 4dio_A NAD(P) transhydrogenase 90.8 0.22 7.4E-06 52.4 5.2 35 107-147 190-224 (405)
354 3p2y_A Alanine dehydrogenase/p 90.0 0.25 8.6E-06 51.4 4.9 35 107-147 184-218 (381)
355 1dwl_A Ferredoxin I; electron 90.0 0.13 4.5E-06 37.6 2.0 26 602-631 1-26 (59)
356 1q16_B Respiratory nitrate red 89.9 0.044 1.5E-06 59.2 -1.0 54 565-631 212-271 (512)
357 3l4b_C TRKA K+ channel protien 89.8 0.22 7.4E-06 47.6 3.9 33 109-147 2-34 (218)
358 1xer_A Ferredoxin; electron tr 89.6 0.12 3.9E-06 43.1 1.6 28 602-632 37-64 (103)
359 3i83_A 2-dehydropantoate 2-red 89.6 0.31 1E-05 49.7 5.1 33 108-146 3-35 (320)
360 1sez_A Protoporphyrinogen oxid 89.4 2.1 7E-05 46.2 12.0 36 414-455 460-495 (504)
361 3dfz_A SIRC, precorrin-2 dehyd 89.4 0.34 1.2E-05 46.7 4.9 33 107-145 31-63 (223)
362 4g65_A TRK system potassium up 88.9 0.25 8.6E-06 53.2 4.0 52 108-165 4-63 (461)
363 1dax_A Ferredoxin I; electron 88.8 0.097 3.3E-06 39.2 0.5 26 602-631 3-28 (64)
364 1x13_A NAD(P) transhydrogenase 88.7 0.36 1.2E-05 51.0 4.9 35 107-147 172-206 (401)
365 2ewd_A Lactate dehydrogenase,; 88.6 0.47 1.6E-05 48.2 5.7 33 108-146 5-38 (317)
366 1mo9_A ORF3; nucleotide bindin 88.5 0.4 1.4E-05 52.5 5.4 36 108-149 215-250 (523)
367 1l7d_A Nicotinamide nucleotide 88.4 0.42 1.4E-05 50.1 5.3 35 107-147 172-206 (384)
368 1lld_A L-lactate dehydrogenase 88.3 0.43 1.5E-05 48.5 5.1 33 108-146 8-42 (319)
369 3eun_A Ferredoxin; electron tr 88.3 0.19 6.5E-06 39.9 1.9 25 604-631 2-26 (82)
370 3hn2_A 2-dehydropantoate 2-red 88.1 0.36 1.2E-05 49.0 4.3 33 108-146 3-35 (312)
371 1pzg_A LDH, lactate dehydrogen 87.9 0.59 2E-05 47.9 5.8 34 108-147 10-44 (331)
372 4e12_A Diketoreductase; oxidor 87.8 0.45 1.5E-05 47.5 4.9 34 108-147 5-38 (283)
373 2x5o_A UDP-N-acetylmuramoylala 87.7 0.33 1.1E-05 51.9 4.0 35 108-148 6-40 (439)
374 1kyq_A Met8P, siroheme biosynt 87.7 0.29 1E-05 48.6 3.3 34 107-146 13-46 (274)
375 1y56_A Hypothetical protein PH 87.7 0.48 1.6E-05 51.4 5.3 60 220-298 265-324 (493)
376 1jb0_C Photosystem I iron-sulf 87.6 0.2 6.8E-06 39.3 1.6 28 602-632 2-29 (80)
377 2z3y_A Lysine-specific histone 87.5 5.1 0.00017 45.0 13.8 37 415-454 623-659 (662)
378 3l9w_A Glutathione-regulated p 87.4 0.62 2.1E-05 49.3 5.8 34 108-147 5-38 (413)
379 1iqz_A Ferredoxin; iron-sulfer 87.3 0.18 6E-06 40.0 1.1 26 602-631 3-28 (81)
380 3g17_A Similar to 2-dehydropan 87.2 0.45 1.5E-05 47.8 4.4 33 108-146 3-35 (294)
381 3lk7_A UDP-N-acetylmuramoylala 87.0 0.39 1.3E-05 51.5 4.1 34 107-146 9-42 (451)
382 1pjc_A Protein (L-alanine dehy 87.0 0.53 1.8E-05 48.9 4.9 33 108-146 168-200 (361)
383 3ado_A Lambda-crystallin; L-gu 86.9 0.49 1.7E-05 48.1 4.5 34 108-147 7-40 (319)
384 1jw9_B Molybdopterin biosynthe 86.8 0.62 2.1E-05 45.6 5.1 34 107-146 31-65 (249)
385 2a9f_A Putative malic enzyme ( 86.7 0.6 2.1E-05 48.6 5.1 35 106-146 187-222 (398)
386 3gg2_A Sugar dehydrogenase, UD 86.6 0.51 1.7E-05 50.6 4.7 34 108-147 3-36 (450)
387 1sj1_A Ferredoxin; thermostabi 86.4 0.24 8.2E-06 37.0 1.4 26 602-631 3-28 (66)
388 1ks9_A KPA reductase;, 2-dehyd 86.2 0.71 2.4E-05 45.8 5.3 33 109-147 2-34 (291)
389 2hjr_A Malate dehydrogenase; m 86.2 0.73 2.5E-05 47.1 5.4 34 108-147 15-49 (328)
390 2raf_A Putative dinucleotide-b 86.2 0.78 2.7E-05 43.5 5.3 35 107-147 19-53 (209)
391 2zvs_A Uncharacterized ferredo 85.8 0.25 8.7E-06 39.4 1.4 25 604-631 2-26 (85)
392 3g0o_A 3-hydroxyisobutyrate de 85.8 0.63 2.1E-05 46.9 4.7 34 107-146 7-40 (303)
393 3c85_A Putative glutathione-re 85.5 0.85 2.9E-05 42.0 5.1 35 107-146 39-73 (183)
394 1bg6_A N-(1-D-carboxylethyl)-L 85.5 0.74 2.5E-05 47.3 5.1 33 108-146 5-37 (359)
395 1f0y_A HCDH, L-3-hydroxyacyl-C 85.5 0.75 2.6E-05 46.3 5.0 32 109-146 17-48 (302)
396 2fdn_A Ferredoxin; electron tr 85.4 0.32 1.1E-05 35.0 1.7 25 603-631 2-26 (55)
397 1t2d_A LDH-P, L-lactate dehydr 85.4 0.88 3E-05 46.4 5.5 33 108-146 5-38 (322)
398 1ur5_A Malate dehydrogenase; o 85.3 0.86 2.9E-05 46.2 5.4 33 108-146 3-36 (309)
399 2ew2_A 2-dehydropantoate 2-red 85.3 0.78 2.7E-05 46.1 5.1 32 109-146 5-36 (316)
400 2fgo_A Ferredoxin; allochromat 85.1 0.25 8.7E-06 39.1 1.0 24 605-631 3-26 (82)
401 3ego_A Probable 2-dehydropanto 85.1 0.8 2.7E-05 46.3 5.1 32 108-146 3-34 (307)
402 1rgv_A Ferredoxin; electron tr 84.9 0.22 7.4E-06 39.3 0.5 24 605-631 3-26 (80)
403 1y6j_A L-lactate dehydrogenase 84.8 0.89 3.1E-05 46.2 5.3 34 107-146 7-42 (318)
404 1kqf_B FDH-N beta S, formate d 84.7 0.22 7.4E-06 50.3 0.6 53 566-631 129-187 (294)
405 1n4w_A CHOD, cholesterol oxida 84.6 1.2 4E-05 48.5 6.4 37 106-148 4-40 (504)
406 2eez_A Alanine dehydrogenase; 84.5 0.84 2.9E-05 47.5 5.0 34 107-146 166-199 (369)
407 1rof_A Ferredoxin; electron tr 84.4 0.26 8.8E-06 36.0 0.7 25 602-630 2-26 (60)
408 1vl6_A Malate oxidoreductase; 84.4 0.92 3.1E-05 47.1 5.1 35 106-146 191-226 (388)
409 3ghy_A Ketopantoate reductase 84.2 0.89 3E-05 46.5 5.0 32 108-145 4-35 (335)
410 1z82_A Glycerol-3-phosphate de 84.1 0.93 3.2E-05 46.3 5.1 36 105-146 12-47 (335)
411 3oj0_A Glutr, glutamyl-tRNA re 84.0 0.41 1.4E-05 42.4 2.0 34 107-146 21-54 (144)
412 1f2g_A Ferredoxin II; electron 83.9 0.16 5.3E-06 37.1 -0.7 23 603-630 2-24 (58)
413 2vhw_A Alanine dehydrogenase; 83.9 0.91 3.1E-05 47.4 5.0 34 107-146 168-201 (377)
414 3qha_A Putative oxidoreductase 83.6 0.69 2.4E-05 46.5 3.8 36 106-147 14-49 (296)
415 2y0c_A BCEC, UDP-glucose dehyd 83.5 0.99 3.4E-05 48.7 5.1 34 108-147 9-42 (478)
416 3l6d_A Putative oxidoreductase 83.4 1 3.6E-05 45.4 5.0 34 107-146 9-42 (306)
417 2v6b_A L-LDH, L-lactate dehydr 83.2 1.1 3.7E-05 45.3 5.0 32 109-146 2-35 (304)
418 2dpo_A L-gulonate 3-dehydrogen 83.2 0.92 3.1E-05 46.2 4.5 34 108-147 7-40 (319)
419 2c42_A Pyruvate-ferredoxin oxi 83.1 0.34 1.2E-05 58.3 1.4 45 584-631 662-706 (1231)
420 3doj_A AT3G25530, dehydrogenas 83.0 1.2 4E-05 45.1 5.2 34 108-147 22-55 (310)
421 3phh_A Shikimate dehydrogenase 82.8 1.3 4.4E-05 43.9 5.2 35 107-147 118-152 (269)
422 1nyt_A Shikimate 5-dehydrogena 82.7 1.2 4.1E-05 44.1 5.0 34 107-146 119-152 (271)
423 3vtf_A UDP-glucose 6-dehydroge 82.7 1.2 4E-05 47.5 5.2 34 108-147 22-55 (444)
424 3eag_A UDP-N-acetylmuramate:L- 82.7 0.99 3.4E-05 46.0 4.6 34 108-147 5-39 (326)
425 1b37_A Protein (polyamine oxid 82.6 1.3 4.3E-05 47.6 5.6 55 212-283 206-268 (472)
426 1guz_A Malate dehydrogenase; o 82.4 1.3 4.4E-05 44.9 5.2 35 109-147 2-36 (310)
427 1coy_A Cholesterol oxidase; ox 82.4 1.6 5.6E-05 47.4 6.4 36 106-147 10-45 (507)
428 4ffl_A PYLC; amino acid, biosy 82.2 1.3 4.3E-05 45.8 5.2 34 109-148 3-36 (363)
429 4a7p_A UDP-glucose dehydrogena 82.2 1.3 4.5E-05 47.3 5.4 36 107-148 8-43 (446)
430 3ond_A Adenosylhomocysteinase; 81.9 1.1 3.8E-05 48.1 4.6 34 107-146 265-298 (488)
431 3pid_A UDP-glucose 6-dehydroge 81.8 1.1 3.8E-05 47.5 4.6 38 103-147 32-69 (432)
432 3gvi_A Malate dehydrogenase; N 81.1 1.6 5.5E-05 44.4 5.4 34 108-147 8-42 (324)
433 3k96_A Glycerol-3-phosphate de 81.1 1.3 4.4E-05 45.8 4.8 34 108-147 30-63 (356)
434 3dhn_A NAD-dependent epimerase 80.7 2.2 7.4E-05 40.3 6.0 55 108-168 5-66 (227)
435 3tl2_A Malate dehydrogenase; c 80.6 1.7 5.7E-05 44.2 5.3 33 108-146 9-42 (315)
436 2aef_A Calcium-gated potassium 80.5 0.64 2.2E-05 44.8 2.1 34 107-147 9-42 (234)
437 2egg_A AROE, shikimate 5-dehyd 80.5 1.5 5.1E-05 44.1 4.9 34 107-146 141-175 (297)
438 3pef_A 6-phosphogluconate dehy 80.3 1.5 5.3E-05 43.5 4.9 33 109-147 3-35 (287)
439 4ezb_A Uncharacterized conserv 80.2 1.4 4.9E-05 44.7 4.7 35 107-147 24-59 (317)
440 3d1l_A Putative NADP oxidoredu 80.2 1.9 6.3E-05 42.3 5.4 33 108-146 11-44 (266)
441 3dtt_A NADP oxidoreductase; st 80.0 1.5 5E-05 42.6 4.5 35 107-147 19-53 (245)
442 1pjq_A CYSG, siroheme synthase 80.0 1.5 5.1E-05 47.0 5.0 33 107-145 12-44 (457)
443 3gvp_A Adenosylhomocysteinase 80.0 1.4 4.9E-05 46.4 4.6 35 106-146 219-253 (435)
444 3k6j_A Protein F01G10.3, confi 79.9 1.4 4.7E-05 47.2 4.6 34 108-147 55-88 (460)
445 1zej_A HBD-9, 3-hydroxyacyl-CO 79.8 1.5 5.2E-05 44.0 4.6 34 107-147 12-45 (293)
446 3hwr_A 2-dehydropantoate 2-red 79.6 1.4 4.9E-05 44.6 4.5 33 107-146 19-51 (318)
447 2r6j_A Eugenol synthase 1; phe 79.5 2.5 8.6E-05 42.3 6.3 36 106-147 10-46 (318)
448 1zcj_A Peroxisomal bifunctiona 79.5 1.5 5.3E-05 47.0 4.9 33 109-147 39-71 (463)
449 3p7m_A Malate dehydrogenase; p 79.5 2 7E-05 43.6 5.5 34 108-147 6-40 (321)
450 1mv8_A GMD, GDP-mannose 6-dehy 79.4 1.1 3.9E-05 47.6 3.8 33 109-147 2-34 (436)
451 3ius_A Uncharacterized conserv 79.4 1.6 5.3E-05 43.1 4.6 33 108-146 6-38 (286)
452 4huj_A Uncharacterized protein 79.3 1.2 4.1E-05 42.5 3.6 34 108-147 24-58 (220)
453 1evy_A Glycerol-3-phosphate de 79.3 1.2 4.3E-05 45.9 4.0 32 109-146 17-48 (366)
454 1a5z_A L-lactate dehydrogenase 79.2 1.8 6.2E-05 43.9 5.1 32 109-146 2-35 (319)
455 1oju_A MDH, malate dehydrogena 79.2 1.6 5.5E-05 43.8 4.6 32 109-146 2-35 (294)
456 4e21_A 6-phosphogluconate dehy 79.2 1.6 5.4E-05 45.2 4.7 35 107-147 22-56 (358)
457 1txg_A Glycerol-3-phosphate de 79.1 1.7 5.9E-05 44.0 4.9 30 109-144 2-31 (335)
458 3don_A Shikimate dehydrogenase 79.0 1.5 5.2E-05 43.5 4.3 35 107-147 117-152 (277)
459 1kdg_A CDH, cellobiose dehydro 78.9 2 6.7E-05 47.1 5.6 36 106-147 6-41 (546)
460 2v2k_A Ferredoxin; iron, trans 78.9 0.54 1.9E-05 39.1 0.8 25 604-631 2-28 (105)
461 2vns_A Metalloreductase steap3 78.8 2 6.8E-05 40.8 4.9 33 108-146 29-61 (215)
462 3pqe_A L-LDH, L-lactate dehydr 78.7 2.2 7.5E-05 43.5 5.5 33 108-146 6-40 (326)
463 2uyy_A N-PAC protein; long-cha 78.6 2.1 7.2E-05 43.1 5.3 34 108-147 31-64 (316)
464 3ce6_A Adenosylhomocysteinase; 78.5 1.6 5.6E-05 47.0 4.6 34 107-146 274-307 (494)
465 1bc6_A 7-Fe ferredoxin; electr 78.4 0.76 2.6E-05 35.7 1.5 25 604-631 2-28 (77)
466 3nep_X Malate dehydrogenase; h 78.2 2.3 7.7E-05 43.1 5.3 33 109-147 2-36 (314)
467 3d4o_A Dipicolinate synthase s 78.2 2 6.7E-05 43.0 4.9 34 107-146 155-188 (293)
468 2xag_A Lysine-specific histone 78.1 16 0.00053 42.3 13.0 38 415-455 794-831 (852)
469 2rir_A Dipicolinate synthase, 78.0 2 6.8E-05 43.1 4.9 34 107-146 157-190 (300)
470 1vpd_A Tartronate semialdehyde 78.0 1.6 5.5E-05 43.5 4.2 33 108-146 6-38 (299)
471 3ggo_A Prephenate dehydrogenas 78.0 2 6.8E-05 43.5 4.9 33 108-146 34-68 (314)
472 2hk9_A Shikimate dehydrogenase 77.8 2.2 7.4E-05 42.3 5.1 34 107-146 129-162 (275)
473 3pdu_A 3-hydroxyisobutyrate de 77.6 1.6 5.6E-05 43.3 4.1 33 109-147 3-35 (287)
474 3two_A Mannitol dehydrogenase; 77.6 2.2 7.6E-05 43.6 5.3 35 107-147 177-211 (348)
475 2p4q_A 6-phosphogluconate dehy 77.6 2.2 7.4E-05 46.3 5.3 36 106-147 9-44 (497)
476 1hdo_A Biliverdin IX beta redu 77.5 4.4 0.00015 37.2 6.9 34 108-147 4-38 (206)
477 3uko_A Alcohol dehydrogenase c 77.5 2.3 7.9E-05 44.1 5.4 35 107-147 194-229 (378)
478 1yj8_A Glycerol-3-phosphate de 77.4 2 6.8E-05 44.6 4.9 34 108-147 22-62 (375)
479 1p77_A Shikimate 5-dehydrogena 77.4 1.6 5.4E-05 43.2 3.9 34 107-146 119-152 (272)
480 1jay_A Coenzyme F420H2:NADP+ o 77.3 2.2 7.5E-05 40.1 4.7 32 109-146 2-34 (212)
481 3c7a_A Octopine dehydrogenase; 77.2 1.5 5.2E-05 46.0 3.9 31 108-144 3-34 (404)
482 3ktd_A Prephenate dehydrogenas 77.1 2.1 7.4E-05 43.8 4.9 33 108-146 9-41 (341)
483 3d0o_A L-LDH 1, L-lactate dehy 77.0 2.6 8.8E-05 42.8 5.4 34 107-146 6-41 (317)
484 3gpi_A NAD-dependent epimerase 76.9 2.6 8.8E-05 41.5 5.3 34 108-147 4-37 (286)
485 1h98_A Ferredoxin; electron tr 76.8 0.69 2.4E-05 36.1 0.8 25 604-631 2-28 (78)
486 1x0v_A GPD-C, GPDH-C, glycerol 76.8 1.8 6.2E-05 44.4 4.3 34 108-147 9-49 (354)
487 1piw_A Hypothetical zinc-type 76.8 2.4 8.2E-05 43.7 5.2 34 108-147 181-214 (360)
488 2pv7_A T-protein [includes: ch 76.8 2.4 8.1E-05 42.5 5.1 34 108-147 22-56 (298)
489 3u62_A Shikimate dehydrogenase 76.8 2.4 8.2E-05 41.5 4.9 32 109-146 110-142 (253)
490 2rcy_A Pyrroline carboxylate r 76.7 2.7 9.3E-05 40.9 5.4 34 108-147 5-42 (262)
491 3tnl_A Shikimate dehydrogenase 76.6 2.3 7.9E-05 43.1 4.9 34 107-146 154-188 (315)
492 3jyo_A Quinate/shikimate dehyd 76.6 2.5 8.4E-05 42.2 5.0 34 107-146 127-161 (283)
493 3gt0_A Pyrroline-5-carboxylate 76.4 2.3 8E-05 41.2 4.8 33 108-146 3-39 (247)
494 3h8v_A Ubiquitin-like modifier 76.2 2.8 9.6E-05 41.9 5.3 34 107-146 36-70 (292)
495 4gx0_A TRKA domain protein; me 76.2 2.3 7.8E-05 46.8 5.1 51 108-164 349-402 (565)
496 1ez4_A Lactate dehydrogenase; 76.1 2.9 9.8E-05 42.4 5.5 34 107-146 5-40 (318)
497 1gpj_A Glutamyl-tRNA reductase 75.9 2.4 8.4E-05 44.5 5.1 34 107-146 167-201 (404)
498 3ew7_A LMO0794 protein; Q8Y8U8 75.9 2.8 9.5E-05 39.2 5.0 32 109-146 2-34 (221)
499 2f1k_A Prephenate dehydrogenas 75.8 2.7 9.1E-05 41.4 5.1 32 109-146 2-33 (279)
500 2izz_A Pyrroline-5-carboxylate 75.8 2.6 9E-05 42.7 5.1 34 108-147 23-60 (322)
No 1
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=100.00 E-value=2e-95 Score=823.54 Aligned_cols=539 Identities=57% Similarity=1.042 Sum_probs=480.9
Q ss_pred cccccccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeee
Q 006466 101 MCRESMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVP 180 (644)
Q Consensus 101 ~~~~~~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~ 180 (644)
|+++.|++||||||||||||++|+.|++...+.++|++|+||||++.+++++.+|+.+.++++.++++.|.....++...
T Consensus 29 ~~~~~~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~~~~l~~ll~~~~~~g~~~~~~ 108 (584)
T 2gmh_A 29 MERFAEEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEELFPDWKEKGAPLNTP 108 (584)
T ss_dssp CCCCEEECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEECTHHHHHHCTTHHHHTCCCCEE
T ss_pred ccccccCCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccccccCHHHHHHHHHHHHhcCCceeee
Confidence 45677889999999999999999999997555566999999999999998888899999999999999998766776655
Q ss_pred ccCCcEEEeccCCccccC---C-CCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCcc
Q 006466 181 VSSDKFWFLTKDRAFSLP---S-PFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGI 256 (644)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~ 256 (644)
+..+.+.++.....+.++ . .+.+.+.|.++|..|.++|.+++++.||+|+++++|++++.++++.|++|.+.++|+
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~ 188 (584)
T 2gmh_A 109 VTEDRFGILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGI 188 (584)
T ss_dssp CCEEEEEEECSSCEEECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEE
T ss_pred echhheeeeccCCCccccccCccccccCCCEEEeHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccc
Confidence 555666666654444444 2 244566899999999999999999999999999999999998778888999998888
Q ss_pred ccCCCcccccccceEEEcCEEEEecCCCCcchHHHHHHcCCCcccccCcccceeEEEEEEeecCCCCCCCcEEEEeccCC
Q 006466 257 AKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPL 336 (644)
Q Consensus 257 ~~~G~~~~~~~~g~~i~a~~vV~A~G~~s~l~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~h~~g~~~ 336 (644)
+++|+++.+|++|.+++||+||+|||.+|.++++|.+.+++.. ...++.+++|++++|.++.....++.+.|+++|++
T Consensus 189 ~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~vr~~l~~~~gl~~--~~~p~~~g~g~~~~~~v~~~~~~~~~~~~~~g~~~ 266 (584)
T 2gmh_A 189 QKDGAPKTTFERGLELHAKVTIFAEGCHGHLAKQLYKKFDLRA--NCEPQTYGIGLKELWVIDEKKWKPGRVDHTVGWPL 266 (584)
T ss_dssp CTTSCEEEEEECCCEEECSEEEECCCTTCHHHHHHHHHTTTTT--TSCCCCEEEEEEEEEECCGGGCCTTEEEEEEETTS
T ss_pred cCCCCcccccCCceEEECCEEEEeeCCCchHHHHHHHHhCCCC--CCCchhHHhhhhhheecCcccccCCeEEEEEeccc
Confidence 8899998999999999999999999999999999999999873 45678889999999988776667788899999988
Q ss_pred CCCCcceEEEEEeC--CCeEEEEEEEccCCCCCCCCcHHHHHHhhcCCcchhcccCCceeeecceeeecCCcccCCcccC
Q 006466 337 DQKTYGGSFLYHMN--DRQIALGLVVALNYHNPFLNPYEEFQKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVF 414 (644)
Q Consensus 337 ~~~~~g~~~l~~~~--~~~~~ig~~~~~d~~~~~~~~~~~~~~~~~~p~i~~~l~~~~~i~~~~~~i~~gg~~~~~~~~~ 414 (644)
....+++.|+|+.. ++.+.++++...++.++..++.++|++++.||.+.+++++++.+.++.+.++.+++..+++|..
T Consensus 267 ~~~~~gg~~~~~~~~~~~~~~vg~~~~~~~~~~~~~~~~~l~~~~~~p~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (584)
T 2gmh_A 267 DRHTYGGSFLYHLNEGEPLLALGFVVGLDYQNPYLSPFREFQRWKHHPSIKPTLEGGKRIAYGARALNEGGFQSIPKLTF 346 (584)
T ss_dssp CTTSCEEEEEEECCSSSCEEEEEEEEETTCCCTTCCHHHHHHHHTTSTTTHHHHTTCEEEEEEEEEEECCGGGGCCCCEE
T ss_pred cCCcCCceEEEEecCCCCeEEEEEEEecCcccccCChHHHHHHHHhChHHHHHhCCCeEEEecceEccCCCcccCCcccc
Confidence 76667889999998 7899999998877766667788899999889999999998888889888888888888899999
Q ss_pred CCeEEEccCCcccCCCCCcchHHHHHHHHHHHHHHhccccC-----Cch---HHHHHHHHHHhHHHHHHHHHhcchhhhh
Q 006466 415 PGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE-----DSN---MEIYWDTLQKSWVWQELQRARNYRPAFE 486 (644)
Q Consensus 415 ~~v~LiGDAA~~~~P~~g~G~~~A~~sa~~lA~~l~~~l~~-----~~~---l~~Ye~~~~~~~~~~~l~~~r~~~~~~~ 486 (644)
+|++|||||||+++|+.|+|+++||+||++||++|.+++.. ..+ |+.|+++++++|+.++++.+|+++++|+
T Consensus 347 ~rv~LvGDAAh~~~P~~GqG~~~Ai~da~~LA~~L~~~~~~g~~~~~~a~~~L~~Ye~~r~~~~v~~~l~~~r~~~~~~~ 426 (584)
T 2gmh_A 347 PGGLLIGCSPGFMNVPKIKGTHTAMKSGTLAAESIFNQLTSENLQSKTIGLHVTEYEDNLKNSWVWKELYSVRNIRPSCH 426 (584)
T ss_dssp TTEEECTTTTCCCBTTTTBCHHHHHHHHHHHHHHHHHHHTCCCCCCSSSSCCCTHHHHHHHTSHHHHHHHHTTTTTGGGG
T ss_pred CCEEEEcccccccCccccccHHHHHHHHHHHHHHHHHHHHcCCcchhhhhhhHHHHHHHHHHhHHHHHHHHHhChhHHHH
Confidence 99999999999999999999999999999999999987642 233 8999999999999999999999999985
Q ss_pred -c-CChHHHHHHHHHHHHccCCCCccccCCCCCccccchhhcCCCCCCCCCCCCccccccccccccCCcCCCCCCCcEEe
Q 006466 487 -Y-GLLPGLAICGLEHYILRGKSPYTLKHGKPDHEATDAARLHSPIEYPKPDGVLSFDVPTSLHRSNTNHEHDQPAHLRL 564 (644)
Q Consensus 487 -~-g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~y~~pd~~l~fd~~~~~~~~~~~~~~~~~~h~~~ 564 (644)
+ |+|++++..++++|+.+|+.||+++|.++|+..+++++++++|+||||||+||||+++|||+|||+|+||||+||+|
T Consensus 427 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~hl~~ 506 (584)
T 2gmh_A 427 GILGVYGGMIYTGIFYWIFRGMEPWTLKHKGSDSDQLKPAKDCTPIEYPKPDGQISFDLLSSVALSGTNHEHDQPAHLTL 506 (584)
T ss_dssp STTTHHHHHHHHHHHTTTTTTCCSCCCCCCSCGGGCCCCGGGSCCCCCCCCCSSSSCCHHHHHHTTTCBCCSSSCCSEEE
T ss_pred HhhccHHHHHHHHHHHHHcCCCCCCccCCCCCCchhhhhHHhcCCCCCCCccccccccccchhhhccccccCCCCCeEEE
Confidence 3 99999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCccccCCCCCCCCcceeeCCeeEEEecCCCCc-eeEEEecCCcccCCCCcceeeeCCCCCceeeCCCCCCCCCcCC
Q 006466 565 RDPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQ-LKLQINAQNCLHCKDFQACDIKDPKQNIKWTVPEGGGGPGYSV 643 (644)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~cpa~~y~~~~~~~~~-~~~~~~~~~c~~c~~~~~c~~~~p~~~i~w~~p~gg~g~~~~~ 643 (644)
+|+++|...|+++|++||+++|||+||++++++++. .+++||++|||||| ||+|+||++||+|+|||||+||+|++
T Consensus 507 ~d~~~~~~~~~~~~~~~c~~~CPa~~~~~~~~~~~~~~~~~i~~~~Ci~C~---~C~~~cp~~~i~~~~p~gg~g~~~~~ 583 (584)
T 2gmh_A 507 KDDSVPVNRNLSIYDGPEQRFCPAGVYEFVPLEQGDGFRLQINAQNCVHCK---TCDIKDPSQNINWVVPEGGGGPAYNG 583 (584)
T ss_dssp SSTTHHHHTHHHHHCCTHHHHCTTCCEEEEECSSTTCEEEEECGGGCCCCC---HHHHHCTTCCEEECCCSTTCBCCCSC
T ss_pred cCcccchhhchhhhcchhhhcCChhhEEEeecCCCCceEEEEeCCCCcCCC---CchhhCCCCCceeECCCCCCCcCccC
Confidence 999999887788899999999999999996533332 27999999999999 99999999999999999999999999
Q ss_pred C
Q 006466 644 M 644 (644)
Q Consensus 644 ~ 644 (644)
|
T Consensus 584 ~ 584 (584)
T 2gmh_A 584 M 584 (584)
T ss_dssp C
T ss_pred C
Confidence 9
No 2
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=100.00 E-value=9e-35 Score=311.75 Aligned_cols=339 Identities=20% Similarity=0.288 Sum_probs=223.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcE
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (644)
.|||+|||||||||++|+.|+++ |++|+||||.+.++.+..+|+.+.++.+.++- . ......+...+. ..
T Consensus 4 ~yDViIVGaGpaGl~~A~~La~~------G~~V~v~Er~~~~~~~~~~g~~l~~~~l~~l~-~-~~~~~~~~~~~~--~~ 73 (397)
T 3oz2_A 4 TYDVLVVGGGPGGSTAARYAAKY------GLKTLMIEKRPEIGSPVRCGEGLSKGILNEAD-I-KADRSFIANEVK--GA 73 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSTTCSCCSCCEEETHHHHHTT-C-CCCTTTEEEEES--EE
T ss_pred CCCEEEECcCHHHHHHHHHHHHC------CCcEEEEeCCCCCCCCCceecccCHHHHHHcC-C-Cchhhhhhcccc--eE
Confidence 59999999999999999999999 99999999999998877788888887765541 1 111111222222 22
Q ss_pred EEeccC--CccccCC-CCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcc
Q 006466 187 WFLTKD--RAFSLPS-PFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKK 263 (644)
Q Consensus 187 ~~~~~~--~~~~~~~-~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~ 263 (644)
.+.... ....++. .......|.++|..+.++|.+.+++.|++++++++|+++..++ +.+.+|.... +|+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~-~~~~~v~~~~-----~~~-- 145 (397)
T 3oz2_A 74 RIYGPSEKRPIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKEN-GKVAGAKIRH-----NNE-- 145 (397)
T ss_dssp EEECTTCSSCEEEECSSSSCCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEET-TEEEEEEEEE-----TTE--
T ss_pred EEEeCCCceEeeccccccCCceeEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeeecc-ceeeeeeecc-----ccc--
Confidence 222221 1111111 1223347899999999999999999999999999999998876 5666665432 111
Q ss_pred cccccceEEEcCEEEEecCCCCcchHHHHHHcCCCcccccCcccceeEEEEEEeecCCCCCCCcEEEEeccCCCCCCcce
Q 006466 264 ENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQKTYGG 343 (644)
Q Consensus 264 ~~~~~g~~i~a~~vV~A~G~~s~l~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~h~~g~~~~~~~~g~ 343 (644)
+.+++||+||+|||.+|.+++++ ++... ........... .+........++....+++. ..+ .++
T Consensus 146 -----~~~~~a~~vIgAdG~~S~vr~~~----g~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~--~g~ 210 (397)
T 3oz2_A 146 -----IVDVRAKMVIAADGFESEFGRWA----GLKSV-ILARNDIISAL--QYRMINVDVDPDYTDFYLGS-IAP--AGY 210 (397)
T ss_dssp -----EEEEEEEEEEECCCTTCHHHHHH----TCGGG-CCCGGGEEEEE--EEEEESCCCCTTEEEEECST-TST--TEE
T ss_pred -----ceEEEEeEEEeCCccccHHHHHc----CCCcc-cccceeeeeeE--EEEeeccccCcccceeeeec-cCC--Cce
Confidence 35799999999999999998865 55421 11111111111 12222333334444444443 222 256
Q ss_pred EEEEEeCCCeEEEEEEEccCCCCCCCCcHHHHHHh-hcCCcchhcccCCceeeecceeeecCCcccCCcccCCCeEEEcc
Q 006466 344 SFLYHMNDRQIALGLVVALNYHNPFLNPYEEFQKF-KHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGC 422 (644)
Q Consensus 344 ~~l~~~~~~~~~ig~~~~~d~~~~~~~~~~~~~~~-~~~p~i~~~l~~~~~i~~~~~~i~~gg~~~~~~~~~~~v~LiGD 422 (644)
.|+++..++..++++....+.........+.++++ ..+|.+. ..+.+......++..... .++..+|++|+||
T Consensus 211 ~~~~~~~~~~~~vg~~~~~~~~~~~~~~~~~l~~~~~~~~~l~----~~~~~~~~~~~~~~~~~~--~~~~~~~v~lvGD 284 (397)
T 3oz2_A 211 IWVFPKGEGMANVGIGSSINWIHNRFELKNYLDRFIENHPGLK----KGQDIQLVTGGVSVSKVK--MPITMPGLMLVGD 284 (397)
T ss_dssp EEEEEEETTEEEEEEEEETTTSCSHHHHHHHHHHHHHTCHHHH----TSEEEEEEEEEEECCCCC--SCCEETTEEECGG
T ss_pred EEEeecccceeEEEEeeccchhhhhhhHHHHHHHHHHhCcccc----ccceeeeeeccccccCcc--cceeeeeEEEccc
Confidence 89999999999999887655433222233344444 3444433 233343333334443322 3577899999999
Q ss_pred CCcccCCCCCcchHHHHHHHHHHHHHHhccccC----CchHHHHHHHHHHhHHHHHHHHHhcchhhh
Q 006466 423 AAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE----DSNMEIYWDTLQKSWVWQELQRARNYRPAF 485 (644)
Q Consensus 423 AA~~~~P~~g~G~~~A~~sa~~lA~~l~~~l~~----~~~l~~Ye~~~~~~~~~~~l~~~r~~~~~~ 485 (644)
|||+++|+.|+|+++||+||.+||++|.+++.. ...|+.|++.++++ +.++.......++.+
T Consensus 285 AA~~~~P~~G~Gi~~A~~~g~~~A~~i~~~l~~~~~~~~~L~~Ye~~~~~~-~~~~~~~~~~~~~~~ 350 (397)
T 3oz2_A 285 AARLIDPITGGGIANAIVSGMYAAQVTKEAIESNDYSPQMMQKYEKLIKER-FERKHLRNWVAKEKL 350 (397)
T ss_dssp GGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
T ss_pred ccccCCCCcchhHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 999999999999999999999999999988754 35799999999987 444444444444444
No 3
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=100.00 E-value=6.8e-31 Score=282.44 Aligned_cols=339 Identities=19% Similarity=0.258 Sum_probs=226.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcE
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (644)
++||+|||||++|+++|+.|++. |++|+||||.+.++....+++.+.++.+.++ +..............+
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~~------G~~V~l~E~~~~~g~~~~~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~ 73 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAKY------GLKTLMIEKRPEIGSPVRCGEGLSKGILNEA----DIKADRSFIANEVKGA 73 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSTTCSCCSCCEEETHHHHHT----TCCCCTTTEEEEESEE
T ss_pred cCCEEEECcCHHHHHHHHHHHHC------CCCEEEEeCCCCCCCCcccccccCHHHHHHc----CCCCChHHhhhhcceE
Confidence 58999999999999999999999 9999999999988776666776666555443 1111100011111222
Q ss_pred EEeccCC-c-cccCCC-CCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcc
Q 006466 187 WFLTKDR-A-FSLPSP-FSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKK 263 (644)
Q Consensus 187 ~~~~~~~-~-~~~~~~-~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~ 263 (644)
.+..... . +.++.. ......+.+++..|.+.|.+.+++.|++|+++++|+++..++ +.+.+|++.+.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~-~~v~gv~~~~~--------- 143 (397)
T 3cgv_A 74 RIYGPSEKRPIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKEN-GKVAGAKIRHN--------- 143 (397)
T ss_dssp EEECTTCSSCEEEC-----CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEET-TEEEEEEEEET---------
T ss_pred EEEcCCCCEEEEEeccccCCceeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEeC-CEEEEEEEEEC---------
Confidence 3332221 1 222211 113347899999999999999999999999999999998875 66767777430
Q ss_pred cccccceEEEcCEEEEecCCCCcchHHHHHHcCCCcccccCcccceeEEEEEEeecCCCCCCCcEEEEeccCCCCCCcce
Q 006466 264 ENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQKTYGG 343 (644)
Q Consensus 264 ~~~~~g~~i~a~~vV~A~G~~s~l~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~h~~g~~~~~~~~g~ 343 (644)
.++.+++||+||+|+|.+|.+++++ ++.. ....+..+..++.. .+......++....+++. ..+ .|.
T Consensus 144 ---~~~~~~~a~~vV~A~G~~s~~~~~~----g~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~--~g~ 210 (397)
T 3cgv_A 144 ---NEIVDVRAKMVIAADGFESEFGRWA----GLKS-VILARNDIISALQY--RMINVDVDPDYTDFYLGS-IAP--AGY 210 (397)
T ss_dssp ---TEEEEEEEEEEEECCCTTCHHHHHH----TCCT-TCCCGGGEEEEEEE--EEESCCCCTTEEEEECST-TST--TEE
T ss_pred ---CeEEEEEcCEEEECCCcchHhHHhc----CCCc-cCCChhheeEEEEE--EeccCCCCCCcEEEEeCC-cCC--Cce
Confidence 1257899999999999999887765 5542 01223344444432 233222334444444432 222 255
Q ss_pred EEEEEeCCCeEEEEEEEccCCCCCCCCcHHHHHHhhc-CCcchhcccCCceeeecceeeecCCcccCCcccCCCeEEEcc
Q 006466 344 SFLYHMNDRQIALGLVVALNYHNPFLNPYEEFQKFKH-HPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGC 422 (644)
Q Consensus 344 ~~l~~~~~~~~~ig~~~~~d~~~~~~~~~~~~~~~~~-~p~i~~~l~~~~~i~~~~~~i~~gg~~~~~~~~~~~v~LiGD 422 (644)
.|++|..++.+.+++....+.......+.+.++.+.. +|. +...+.+......++..+ ..++|..+|++++||
T Consensus 211 ~~~~P~~~~~~~vg~~~~~~~~~~~~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~p~~~--~~~~~~~~~v~liGD 284 (397)
T 3cgv_A 211 IWVFPKGEGMANVGIGSSINWIHNRFELKNYLDRFIENHPG----LKKGQDIQLVTGGVSVSK--VKMPITMPGLMLVGD 284 (397)
T ss_dssp EEEEEEETTEEEEEEEEETTTCSCHHHHHHHHHHHHHTCHH----HHTSEEEEEEEEEEECCC--CCSCCEETTEEECGG
T ss_pred EEEEECCCCeEEEEEEeccccccCCCCHHHHHHHHHHhCcC----CCCCeEEeeeeeeeecCC--CccceeeCCEEEEEc
Confidence 8999999999999988764432111233344455432 222 223344443334455433 246788899999999
Q ss_pred CCcccCCCCCcchHHHHHHHHHHHHHHhccccC----CchHHHHHHHHHHhHHHHHHHHHhcchhhh
Q 006466 423 AAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE----DSNMEIYWDTLQKSWVWQELQRARNYRPAF 485 (644)
Q Consensus 423 AA~~~~P~~g~G~~~A~~sa~~lA~~l~~~l~~----~~~l~~Ye~~~~~~~~~~~l~~~r~~~~~~ 485 (644)
|||+++|+.|+|+++|++||..||+.|.+.+.. ...|+.|++.+++. +.+++...+.+..++
T Consensus 285 Aa~~~~P~~G~G~~~a~~~a~~la~~l~~~~~~~~~~~~~l~~Y~~~~~~~-~~~~~~~~~~~~~~~ 350 (397)
T 3cgv_A 285 AARLIDPITGGGIANAIVSGMYAAQVTKEAIESNDYSPQMMQKYEKLIKER-FERKHLRNWVAKEKL 350 (397)
T ss_dssp GGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
T ss_pred cccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 999999999999999999999999999887632 25799999999876 888888888877766
No 4
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.97 E-value=2e-30 Score=284.56 Aligned_cols=343 Identities=16% Similarity=0.173 Sum_probs=220.2
Q ss_pred cccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCC-CcccccCccChHHHHHHhhhhhhcCCCee-eecc
Q 006466 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVG-AHIISGNVFEPRALNELLPQWKQEEAPIR-VPVS 182 (644)
Q Consensus 105 ~~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g-~~~~~g~~i~~~~l~~l~~~~~~~~~~~~-~~~~ 182 (644)
.+++||+||||||||+++|+.|++. |++|+||||.+... +...+|..+..+.+.+ ++....... ....
T Consensus 4 ~~~~dVvIVGaG~aGl~aA~~La~~------G~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~----lg~~~~~~~~~~~~ 73 (453)
T 3atr_A 4 ELKYDVLIIGGGFAGSSAAYQLSRR------GLKILLVDSKPWNRIGDKPCGDAVSKAHFDK----LGMPYPKGEELENK 73 (453)
T ss_dssp EEECSEEEECCSHHHHHHHHHHSSS------SCCEEEECSSCGGGTTCSCCCCEEEHHHHHH----TTCCCCCGGGEEEE
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHC------CCCEEEEECCCCCCCCcccccccccHHHHHH----hcCCCCchHHHHhh
Confidence 3469999999999999999999999 99999999987642 2334565554444433 221111000 0001
Q ss_pred CCcEEEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCc
Q 006466 183 SDKFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSK 262 (644)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~ 262 (644)
...+.++.......++. ....+.++|..|.+.|.+.+++.|++|+++++|+++..++ +.+++|++.+. .+|+
T Consensus 74 ~~~~~~~~~~~~~~~~~---~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~-~~v~gv~~~~~---~~G~- 145 (453)
T 3atr_A 74 INGIKLYSPDMQTVWTV---NGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFED-GYVKGAVLFNR---RTNE- 145 (453)
T ss_dssp EEEEEEECTTSSCEEEE---EEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEET-TEEEEEEEEET---TTTE-
T ss_pred hcceEEECCCCceEEeE---CCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEEC-CEEEEEEEEEc---CCCc-
Confidence 11122222221111110 1125789999999999999999999999999999998866 56766766420 0222
Q ss_pred ccccccceEEEcCEEEEecCCCCcchHHHHHHcCCCcc--cccCcccceeEEEEEEeecCCCCCCCcEEEEeccCCCCCC
Q 006466 263 KENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREK--SHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQKT 340 (644)
Q Consensus 263 ~~~~~~g~~i~a~~vV~A~G~~s~l~~~l~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~g~~~h~~g~~~~~~~ 340 (644)
..+++||+||+|||.+|.+++.+ +...+ ....+..+..++...+.+......++....+++.+..++
T Consensus 146 ------~~~~~ad~VV~AdG~~s~vr~~l----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 214 (453)
T 3atr_A 146 ------ELTVYSKVVVEATGYSRSFRSKL----PPELPITEDLDDKDADVAYREVLLTKEDIEDHDYLRIFIDQETSPG- 214 (453)
T ss_dssp ------EEEEECSEEEECCGGGCTTGGGS----CTTSGGGCCCCGGGEEEEEEEEEEESSCCTTTTEEEEECCTTTSTT-
T ss_pred ------eEEEEcCEEEECcCCchhhHHhc----CCCCCcccCCCcccceeeeEEEEecCCCccCCCeEEEEECCCCCCC-
Confidence 13799999999999999988754 44321 011222445666655555433223343333444333333
Q ss_pred cceEEEEEeCCCeEEEEEEEccCCCCCCCCcHHHHHHhhc--CCcchhcccCCceeeecceeeecCCcccCCcccCCCeE
Q 006466 341 YGGSFLYHMNDRQIALGLVVALNYHNPFLNPYEEFQKFKH--HPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGA 418 (644)
Q Consensus 341 ~g~~~l~~~~~~~~~ig~~~~~d~~~~~~~~~~~~~~~~~--~p~i~~~l~~~~~i~~~~~~i~~gg~~~~~~~~~~~v~ 418 (644)
|+.|++|..++.+++++....+.. ...+.+.+..+.. .+.+ .+.+.+......++.. ..+++|..+|++
T Consensus 215 -g~~~~~P~~~~~~~vg~~~~~~~~--~~~~~~~~~~~l~~~~~~~----~~~~~~~~~~~~~p~~--~~~~~~~~~~v~ 285 (453)
T 3atr_A 215 -GYWWYFPKGKNKVNVGLGIQGGMG--YPSIHEYYKKYLDKYAPDV----DKSKLLVKGGALVPTR--RPLYTMAWNGII 285 (453)
T ss_dssp -SCEEEEEEETTEEEEEEEEESSSC--CCCHHHHHHHHHHHHCTTE----EEEEEEEEEEEEEECS--SCCSCSEETTEE
T ss_pred -cEEEEEECCCCeEEEEEEecCCCC--CCCHHHHHHHHHHhhhhhc----CCCeEEeccceeccCC--CCCCceecCCEE
Confidence 458999999999999887654321 1234444444321 2222 2222332222233332 245678889999
Q ss_pred EEccCCcccCCCCCcchHHHHHHHHHHHHHHhccccC----CchHHHHHHHHHHhHHHHHHHHHhcchhhhh
Q 006466 419 IIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE----DSNMEIYWDTLQKSWVWQELQRARNYRPAFE 486 (644)
Q Consensus 419 LiGDAA~~~~P~~g~G~~~A~~sa~~lA~~l~~~l~~----~~~l~~Ye~~~~~~~~~~~l~~~r~~~~~~~ 486 (644)
|+|||||+++|+.|+|+++||+||..||++|.+.+.. ..+|+.|++.+++. +.+.+..++.++.++.
T Consensus 286 lvGDAAh~~~P~~G~G~~~Ai~da~~la~~l~~~l~~~~~~~~~L~~Y~~~r~~~-~~~~~~~~~~~~~~~~ 356 (453)
T 3atr_A 286 VIGDSGFTVNPVHGGGKGSAMISGYCAAKAILSAFETGDFSASGLWDMNICYVNE-YGAKQASLDIFRRFLQ 356 (453)
T ss_dssp ECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHTCCSTTTTTHHHHHHHHH-THHHHHHHHHHHHHHT
T ss_pred EEeCcccCCCCCccccHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999876531 46899999999976 7777777777776653
No 5
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.97 E-value=1.5e-29 Score=273.49 Aligned_cols=336 Identities=15% Similarity=0.095 Sum_probs=209.8
Q ss_pred cccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCC
Q 006466 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSD 184 (644)
Q Consensus 105 ~~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~ 184 (644)
...+||+||||||+||++|+.|++. |++|+||||.+.+.. ...+..+.+..+. ++..++.............
T Consensus 21 ~~~~dV~IVGaG~aGl~~A~~La~~------G~~V~v~E~~~~~~~-~~~~~~l~~~~~~-~l~~lg~~~~~~~~~~~~~ 92 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGGLSAAVALKQS------GIDCDVYEAVKEIKP-VGAAISVWPNGVK-CMAHLGMGDIMETFGGPLR 92 (407)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSSCC-----CEEEECHHHHH-HHHHTTCHHHHHHHSCCCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC------CCCEEEEeCCCCCCC-cCeeEEECHHHHH-HHHHCCCHHHHHhhcCCCc
Confidence 3469999999999999999999999 999999999987643 2345566665552 2222221100000011112
Q ss_pred cEEEeccC-Cc--cccCCC----CCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccc
Q 006466 185 KFWFLTKD-RA--FSLPSP----FSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIA 257 (644)
Q Consensus 185 ~~~~~~~~-~~--~~~~~~----~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~ 257 (644)
.+.+.... .. ..++.. ......+.++|..|.+.|.+.+++ ++|+++++|++++.++++ + .|++.+
T Consensus 93 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~-v-~v~~~~---- 164 (407)
T 3rp8_A 93 RMAYRDFRSGENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR--DSVQFGKRVTRCEEDADG-V-TVWFTD---- 164 (407)
T ss_dssp EEEEEETTTCCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG--GGEEESCCEEEEEEETTE-E-EEEETT----
T ss_pred ceEEEECCCCCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc--CEEEECCEEEEEEecCCc-E-EEEEcC----
Confidence 22232221 11 111110 012347889999999999999987 889999999999987743 3 477665
Q ss_pred cCCCcccccccceEEEcCEEEEecCCCCcchHHHHHHcCCCcccccCccccee-EEEEEEeecCCCCCCCcEEEEeccCC
Q 006466 258 KDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYAL-GIKEVWEIDEGKHNPGEILHTLGWPL 336 (644)
Q Consensus 258 ~~G~~~~~~~~g~~i~a~~vV~A~G~~s~l~~~l~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~g~~~h~~g~~~ 336 (644)
|.+++||+||+|||.+|.+++.+. +... .+...+. .+.....++...........+++
T Consensus 165 -----------g~~~~a~~vV~AdG~~S~vr~~l~---~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 223 (407)
T 3rp8_A 165 -----------GSSASGDLLIAADGSHSALRPWVL---GFTP----QRRYAGYVNWNGLVEIDEALAPGDQWTTFVG--- 223 (407)
T ss_dssp -----------SCEEEESEEEECCCTTCSSHHHHH---SSCC----CCEEEEEEEEEEEEECCTTTCCTTEEEEEEE---
T ss_pred -----------CCEEeeCEEEECCCcChHHHHHhc---CCCC----CCcccCcEEEEEEEecccccCCCCceEEEEC---
Confidence 678999999999999999999873 3321 1112221 22222233322222222222221
Q ss_pred CCCCcceEEEEEeCCCeEEEEEEEccCCCCCCCCcH---HHHH-Hhhc-CCcchhcccCCc---eeeecceeeecCCccc
Q 006466 337 DQKTYGGSFLYHMNDRQIALGLVVALNYHNPFLNPY---EEFQ-KFKH-HPAIKPLLEGGT---VVQYGARTLNEGGLQS 408 (644)
Q Consensus 337 ~~~~~g~~~l~~~~~~~~~ig~~~~~d~~~~~~~~~---~~~~-~~~~-~p~i~~~l~~~~---~i~~~~~~i~~gg~~~ 408 (644)
+ .+..|++|..++.+.+.+....+... ...+. +.+. .+.. .+.+..+++... ...+. ..+.. .
T Consensus 224 -~--~~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~---~ 294 (407)
T 3rp8_A 224 -E--GKQVSLMPVSAGRFYFFFDVPLPAGL-AEDRDTLRADLSRYFAGWAPPVQKLIAALDPQTTNRIE--IHDIE---P 294 (407)
T ss_dssp -T--TEEEEEEEETTTEEEEEEEEECCTTC-SCCTTTHHHHHHHHTTTCCHHHHHHHHHSCGGGCEEEE--EEECC---C
T ss_pred -C--CcEEEEEEcCCCeEEEEEEeCCCcCC-CCCchhHHHHHHHHhcCCChHHHHHHHcCCccceeEEe--eEecC---C
Confidence 2 24578899999988877766432211 11221 2222 2222 344444443211 11111 12211 2
Q ss_pred CCcccCCCeEEEccCCcccCCCCCcchHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHhHHHHHHHHHhcchhhhhc
Q 006466 409 IPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHEDSNMEIYWDTLQKSWVWQELQRARNYRPAFEY 487 (644)
Q Consensus 409 ~~~~~~~~v~LiGDAA~~~~P~~g~G~~~A~~sa~~lA~~l~~~l~~~~~l~~Ye~~~~~~~~~~~l~~~r~~~~~~~~ 487 (644)
.++|..+|++|||||||.++|+.|||+++||+||..||++|.+......+|+.|++.++.. ..+.+..++.+..+++.
T Consensus 295 ~~~~~~~rv~LvGDAAh~~~P~~GqG~~~al~da~~La~~L~~~~~~~~~l~~Y~~~r~~~-~~~~~~~s~~~~~~~~~ 372 (407)
T 3rp8_A 295 FSRLVRGRVALLGDAGHSTTPDIGQGGCAAMEDAVVLGAVFRQTRDIAAALREYEAQRCDR-VRDLVLKARKRCDITHG 372 (407)
T ss_dssp CSCCEETTEEECGGGTCCCCGGGSCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHTT
T ss_pred CCceecCCEEEEEcccccCCcchhhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH-HHHHHHHHHHhhhhhhc
Confidence 3688899999999999999999999999999999999999987542246799999999975 77888888888888753
No 6
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.97 E-value=9.8e-29 Score=275.20 Aligned_cols=328 Identities=18% Similarity=0.224 Sum_probs=210.0
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhh------cCCCeee
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQ------EEAPIRV 179 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~------~~~~~~~ 179 (644)
+++||||||||++|+++|+.|++. |++|+||||.+.... ..|..+.+..+..++..++. ...+...
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~------G~~V~liE~~~~~~~--~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~ 77 (512)
T 3e1t_A 6 EVFDLIVIGGGPGGSTLASFVAMR------GHRVLLLEREAFPRH--QIGESLLPATVHGICAMLGLTDEMKRAGFPIKR 77 (512)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTT------TCCEEEECSSCSSCC--CSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEEC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhC------CCCEEEEccCCCCCC--CCCcccCcchHHHHHHHhCcHHHHHHcCCcccc
Confidence 468999999999999999999999 999999999874332 23445555443323222211 1111110
Q ss_pred eccCCcEEEeccCCc--cccCC--CCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCc
Q 006466 180 PVSSDKFWFLTKDRA--FSLPS--PFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMG 255 (644)
Q Consensus 180 ~~~~~~~~~~~~~~~--~~~~~--~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g 255 (644)
. ..+.+...... +.+.. .......|.+++..|.+.|.+.+++.|++|+++++|+++..++ +.+.+|.+.+
T Consensus 78 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~-~~v~gv~~~~-- 151 (512)
T 3e1t_A 78 G---GTFRWGKEPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLFEG-ERAVGVRYRN-- 151 (512)
T ss_dssp E---EEEECSSCSSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEET-TEEEEEEEEC--
T ss_pred C---ceEEecCCccccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEEC-CEEEEEEEEe--
Confidence 0 00111111110 11111 1122346789999999999999999999999999999999866 5676777654
Q ss_pred cccCCCcccccccceEEEcCEEEEecCCCCcchHHHHHHcCCCcccccCcccceeEEEEEEeecC--CCCCCCcEEEEec
Q 006466 256 IAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDE--GKHNPGEILHTLG 333 (644)
Q Consensus 256 ~~~~G~~~~~~~~g~~i~a~~vV~A~G~~s~l~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~g~~~h~~g 333 (644)
.+|+ ..+++||+||+|||.+|.+++++ +... ........++...+.... .....+.....+.
T Consensus 152 --~dG~-------~~~i~ad~VI~AdG~~S~vr~~l----g~~~---~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 215 (512)
T 3e1t_A 152 --TEGV-------ELMAHARFIVDASGNRTRVSQAV----GERV---YSRFFQNVALYGYFENGKRLPAPRQGNILSAAF 215 (512)
T ss_dssp --SSSC-------EEEEEEEEEEECCCTTCSSGGGT----CCEE---ECSTTCEEEEEEEEESCCCCSTTCTTSEEEEEE
T ss_pred --CCCC-------EEEEEcCEEEECCCcchHHHHHc----CCCc---cCchhcceEEEEEecCCccCCCCCcCceEEEEe
Confidence 2332 14799999999999999999865 4432 111112334433333211 1112233332221
Q ss_pred cCCCCCCcceEEEEEeCCCeEEEEEEEccCCCCCC-CCcHHHHHHh-hcCCcchhcccCCceeee-cceeeec-CCc-cc
Q 006466 334 WPLDQKTYGGSFLYHMNDRQIALGLVVALNYHNPF-LNPYEEFQKF-KHHPAIKPLLEGGTVVQY-GARTLNE-GGL-QS 408 (644)
Q Consensus 334 ~~~~~~~~g~~~l~~~~~~~~~ig~~~~~d~~~~~-~~~~~~~~~~-~~~p~i~~~l~~~~~i~~-~~~~i~~-gg~-~~ 408 (644)
+ .|..|++|..++.+.++++...+..... ..+.+.++.+ ..+|.+.+++.....+.. ....++. ..+ ..
T Consensus 216 ----~--~G~~~~~Pl~~~~~~vg~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~l~~~~~~~~~~~~~i~~~~~~~~~ 289 (512)
T 3e1t_A 216 ----Q--DGWFWYIPLSDTLTSVGAVVSREAAEAIKDGHEAALLRYIDRCPIIKEYLAPATRVTTGDYGEIRIRKDYSYC 289 (512)
T ss_dssp ----T--TEEEEEEECSSSEEEEEEEEEHHHHTTTSSCHHHHHHHHHHTSHHHHHHHTTCEECCSSTTSSCEEEESCCEE
T ss_pred ----C--CceEEEEEeCCCeEEEEEEecHHHhhhhcCCHHHHHHHHHHhCchHHHHHhcCccccccccccceeecccccc
Confidence 1 2557899999988999988765432222 2355666665 457777777765543321 1011111 111 13
Q ss_pred CCcccCCCeEEEccCCcccCCCCCcchHHHHHHHHHHHHHHhccccCC----chHHHHHHHHHHh
Q 006466 409 IPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHED----SNMEIYWDTLQKS 469 (644)
Q Consensus 409 ~~~~~~~~v~LiGDAA~~~~P~~g~G~~~A~~sa~~lA~~l~~~l~~~----~~l~~Ye~~~~~~ 469 (644)
.+++..+|++|||||||+++|+.|+|+++||+||..||+.|...+... .+|+.|++.++..
T Consensus 290 ~~~~~~~~vvlvGDAAh~~~P~~GqG~~~Al~dA~~La~~L~~~l~~~~~~~~aL~~Ye~~~~~~ 354 (512)
T 3e1t_A 290 NTSFWKNGMALVGDAACFVDPVFSSGVHLATYSALLVARAINTCLAGEMSEQRCFEEFERRYRRE 354 (512)
T ss_dssp ESCSBCSSEEECGGGTEECCSTTCCHHHHHHHHHHHHHHHHHHHTTTCSCHHHHHHHHHHHHHHH
T ss_pred ccccccCCEEEEechhhcCCCccccCHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHH
Confidence 457788999999999999999999999999999999999999877542 4689999998875
No 7
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.96 E-value=1.8e-28 Score=266.00 Aligned_cols=324 Identities=18% Similarity=0.188 Sum_probs=205.0
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhh------hhcCCCeee
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQW------KQEEAPIRV 179 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~------~~~~~~~~~ 179 (644)
+++||||||||++|+++|+.|++. |++|+||||.+.... ..|..+.+..+. ++..+ .....+..
T Consensus 4 ~~~dVvIIGgG~aGl~~A~~La~~------G~~V~v~E~~~~~~~--~~g~~~~~~~~~-~l~~~g~~~~~~~~~~~~~- 73 (421)
T 3nix_A 4 EKVDVLVIGAGPAGTVAASLVNKS------GFKVKIVEKQKFPRF--VIGESLLPRCME-HLDEAGFLDAVKAQGFQQK- 73 (421)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTT------TCCEEEECSSCSSCC--CSCCBCCGGGHH-HHHHTTCHHHHHHTTCEEE-
T ss_pred ccCcEEEECCCHHHHHHHHHHHhC------CCCEEEEeCCCCCCC--cccCcccHhHHH-HHHHcCChHHHHHcCCccc-
Confidence 358999999999999999999999 999999999875432 345566655442 22221 11111110
Q ss_pred eccCCcEEEeccCC--ccccCCCC--CCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCc
Q 006466 180 PVSSDKFWFLTKDR--AFSLPSPF--SNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMG 255 (644)
Q Consensus 180 ~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g 255 (644)
....+..... .+.+.... .....+.++|..|.+.|.+.+++.|++|+++++|+++..++++.++.|.+.+
T Consensus 74 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~-- 147 (421)
T 3nix_A 74 ----FGAKFVRGKEIADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDIN-- 147 (421)
T ss_dssp ----CEEEEEETTEEEEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETT--
T ss_pred ----CCcEEEeCCeeEEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCC--
Confidence 1111111111 11222111 1234688999999999999999999999999999999988766555566554
Q ss_pred cccCCCcccccccceEEEcCEEEEecCCCCcchHHHHHHcCCCcccccCcccceeEEEEEEee--cCCCCCCCcEEEEec
Q 006466 256 IAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEI--DEGKHNPGEILHTLG 333 (644)
Q Consensus 256 ~~~~G~~~~~~~~g~~i~a~~vV~A~G~~s~l~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~g~~~h~~g 333 (644)
|+ ..+++||+||+|+|.+|.+++. ++++.+ ...+.... +...+.. +......+....++.
T Consensus 148 ----g~-------~~~~~a~~vV~A~G~~s~l~~~----~g~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 209 (421)
T 3nix_A 148 ----GN-------KREIEARFIIDASGYGRVIPRM----FGLDKP-SGFESRRT--LFTHIKDVKRPVAAEMEGNRITAV 209 (421)
T ss_dssp ----SC-------EEEEEEEEEEECCGGGCHHHHH----TTCEEC-CSSCCCEE--EEEEEECTTCCC----CCSEEEEE
T ss_pred ----CC-------EEEEEcCEEEECCCCchhhHHh----cCCCCC-CcCCCcEE--EEEEECCCcCCCccCCCCeEEEEE
Confidence 21 1279999999999999977764 465531 11112221 1111111 111111122222221
Q ss_pred cCCCCCCcceEEEEEeCCCeEEEEEEEccCCCCC-CCCcHHHHHHh-hcCCcchhcccCCceeeecceeeecCCcccCCc
Q 006466 334 WPLDQKTYGGSFLYHMNDRQIALGLVVALNYHNP-FLNPYEEFQKF-KHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPY 411 (644)
Q Consensus 334 ~~~~~~~~g~~~l~~~~~~~~~ig~~~~~d~~~~-~~~~~~~~~~~-~~~p~i~~~l~~~~~i~~~~~~i~~gg~~~~~~ 411 (644)
+.. ..|..|++|..++.+.++++...+.... ...+.+.++.+ ..+|.+.+.++...... ..+.++... ...++
T Consensus 210 -~~~--~~g~~~~~P~~~~~~~vg~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~l~~~~~~~-~~~~~~~~~-~~~~~ 284 (421)
T 3nix_A 210 -VHK--PKVWIWVIPFSNGNTSVGFVGEPSYFDEYTGTPEERMRAMIANEGHIAERFKSEEFLF-EPRTIEGYA-ISASK 284 (421)
T ss_dssp -EEE--TTEEEEEEECTTSEEEEEEEECHHHHTTSCSCHHHHHHHHHHTCTTTHHHHTTCCBSS-CCEEEECCC-BEESC
T ss_pred -eCC--CCEEEEEEEECCCCEEEEEEecHHHhhhcCCCHHHHHHHHHHhCcHHHHHHhcCcccc-Cceeecccc-eeeee
Confidence 111 1245788999999999998876543221 12455666655 45788887777554331 111222111 12456
Q ss_pred ccCCCeEEEccCCcccCCCCCcchHHHHHHHHHHHHHHhccccCC--chHHHHHHHHHH
Q 006466 412 PVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHED--SNMEIYWDTLQK 468 (644)
Q Consensus 412 ~~~~~v~LiGDAA~~~~P~~g~G~~~A~~sa~~lA~~l~~~l~~~--~~l~~Ye~~~~~ 468 (644)
+..+|+++||||||+++|+.|+|+++|+++|..||++|.+.+... ..+..|++.++.
T Consensus 285 ~~~~~v~lvGDAa~~~~P~~G~G~~~A~~~a~~la~~l~~~~~~~~~~~~~~y~~~~~~ 343 (421)
T 3nix_A 285 LYGDGFVLTGNATEFLDPIFSSGATFAMESGSKGGKLAVQFLKGEEVNWEKDFVEHMMQ 343 (421)
T ss_dssp SEETTEEECGGGTCBCCSTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHTHHHHHH
T ss_pred eccCCEEEecccccccCCcccccHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHH
Confidence 788999999999999999999999999999999999999887653 457788877765
No 8
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.96 E-value=4.6e-27 Score=260.50 Aligned_cols=336 Identities=15% Similarity=0.052 Sum_probs=204.5
Q ss_pred ccccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccC
Q 006466 104 ESMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSS 183 (644)
Q Consensus 104 ~~~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~ 183 (644)
+.+++||+||||||+||++|+.|++. |++|+||||.+.++.. ..+..+.++++ +++..++..+..... ...
T Consensus 8 ~~~~~dVlIVGaGpaGl~~A~~La~~------G~~v~vlE~~~~~~~~-~r~~~l~~~~~-~~l~~lGl~~~~~~~-~~~ 78 (500)
T 2qa1_A 8 HRSDAAVIVVGAGPAGMMLAGELRLA------GVEVVVLERLVERTGE-SRGLGFTARTM-EVFDQRGILPRFGEV-ETS 78 (500)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHT------TCCEEEEESCCC-CCC-CCSEEECHHHH-HHHHTTTCGGGGCSC-CBC
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHC------CCCEEEEeCCCCCCCC-CCcceECHHHH-HHHHHCCCHHHHHhc-ccc
Confidence 44679999999999999999999999 9999999999876543 34667777776 344433322111111 011
Q ss_pred CcEEEeccCCccccCCCC-CCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCc
Q 006466 184 DKFWFLTKDRAFSLPSPF-SNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSK 262 (644)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~-~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~ 262 (644)
....+ . ...+++.... .....+.+++..+.+.|.+.+++.|++|+++++|+++..++++ | .|++.+ .+|
T Consensus 79 ~~~~~-~-~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~-v-~v~~~~----~~g-- 148 (500)
T 2qa1_A 79 TQGHF-G-GLPIDFGVLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGAG-V-TVEVRG----PEG-- 148 (500)
T ss_dssp CEEEE-T-TEEEEGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETTE-E-EEEEEE----TTE--
T ss_pred ccccc-c-ceecccccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCCe-E-EEEEEc----CCC--
Confidence 11111 0 1111111100 1112578999999999999999999999999999999988754 4 366554 111
Q ss_pred ccccccceEEEcCEEEEecCCCCcchHHHHHHcCCCcccccCcccceeEEEEEEeecCCCCCCCcEEEEeccCCCCCCcc
Q 006466 263 KENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQKTYG 342 (644)
Q Consensus 263 ~~~~~~g~~i~a~~vV~A~G~~s~l~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~h~~g~~~~~~~~g 342 (644)
..+++||+||+|||.+|.+|+++ ++..+ ...... .++.....++. .++.. +... .+. |
T Consensus 149 ------~~~~~a~~vVgADG~~S~VR~~l----g~~~~-~~~~~~--~~~~~~~~~~~---~~~~~-~~~~---~~~--g 206 (500)
T 2qa1_A 149 ------KHTLRAAYLVGCDGGRSSVRKAA----GFDFP-GTAATM--EMYLADIKGVE---LQPRM-IGET---LPG--G 206 (500)
T ss_dssp ------EEEEEESEEEECCCTTCHHHHHT----TCCCC-EECCCC--EEEEEEEESCC---CCCEE-EEEE---ETT--E
T ss_pred ------CEEEEeCEEEECCCcchHHHHHc----CCCcC-CCccce--EEEEEEEEeCC---CCCce-EEEE---CCC--c
Confidence 14799999999999999988865 55431 111111 12222222221 12222 2111 122 4
Q ss_pred eEEEEEeCCCeEEEEEEEccCCC---CCCCCcHHHHHHhhcCCcchhcccCCceeeecceeeecCCcccCCcccCCCeEE
Q 006466 343 GSFLYHMNDRQIALGLVVALNYH---NPFLNPYEEFQKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAI 419 (644)
Q Consensus 343 ~~~l~~~~~~~~~ig~~~~~d~~---~~~~~~~~~~~~~~~~p~i~~~l~~~~~i~~~~~~i~~gg~~~~~~~~~~~v~L 419 (644)
..|++|.+++...+.+....... ....++.+..+.++.. +...+...+ +.+.. .++. .....++|..+|++|
T Consensus 207 ~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~-~~~~~-~~~~-~~~~a~~~~~grv~L 281 (500)
T 2qa1_A 207 MVMVGPLPGGITRIIVCERGTPPQRRETPPSWHEVADAWKRL--TGDDIAHAE-PVWVS-AFGN-ATRQVTEYRRGRVIL 281 (500)
T ss_dssp EEEEEEETTTEEEEEEEETTCCC-----CCCHHHHHHHHHHH--HSCCCTTSE-EEEEE-EEEC-CEEECSCSEETTEEE
T ss_pred EEEEEEcCCCEEEEEEEcCCCCCccccCCCCHHHHHHHHHHh--cCCCCCccc-eeEEE-Eecc-CcEEccccccCCEEE
Confidence 46888998887777665422111 1112333333333221 000011111 11110 1111 112346788899999
Q ss_pred EccCCcccCCCCCcchHHHHHHHHHHHHHHhccccC---CchHHHHHHHHHHhHHHHHHHHHhcchhhhh
Q 006466 420 IGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE---DSNMEIYWDTLQKSWVWQELQRARNYRPAFE 486 (644)
Q Consensus 420 iGDAA~~~~P~~g~G~~~A~~sa~~lA~~l~~~l~~---~~~l~~Ye~~~~~~~~~~~l~~~r~~~~~~~ 486 (644)
+|||||.++|+.|||+|+||+||..||+.|...+.. ...|+.|+++++.. ..+.+..++.+..++.
T Consensus 282 ~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~~~g~~~~~~L~~Y~~eR~~~-~~~~~~~s~~~~~l~~ 350 (500)
T 2qa1_A 282 AGDSAHIHLPAGGQGMNTSIQDAVNLGWKLGAVVNGTATEELLDSYHSERHAV-GKRLLMNTQAQGLLFL 350 (500)
T ss_dssp CGGGTEECCCCSSCHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
T ss_pred EEccccCCCCccccchhhhHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHH-HHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999887654 36799999998864 5566666665555554
No 9
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.96 E-value=5.6e-27 Score=259.78 Aligned_cols=335 Identities=15% Similarity=0.056 Sum_probs=205.2
Q ss_pred cccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCC
Q 006466 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSD 184 (644)
Q Consensus 105 ~~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~ 184 (644)
.+++||+||||||+||++|+.|++. |++|+||||.+.++.. ..+..+.++++ +++..++..+..... ....
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~~------G~~v~vlE~~~~~~~~-~r~~~l~~~~~-~~l~~lGl~~~~~~~-~~~~ 80 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRLG------GVDVMVLEQLPQRTGE-SRGLGFTARTM-EVFDQRGILPAFGPV-ETST 80 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESCSSCCCC-CCSEEECHHHH-HHHHHTTCGGGGCSC-CEES
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHC------CCCEEEEECCCCCCCC-CceeEECHHHH-HHHHHCCCHHHHHhc-cccc
Confidence 3578999999999999999999999 9999999999876542 34667777776 344443322111110 0001
Q ss_pred cEEEeccCCccccCCCC-CCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcc
Q 006466 185 KFWFLTKDRAFSLPSPF-SNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKK 263 (644)
Q Consensus 185 ~~~~~~~~~~~~~~~~~-~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~ 263 (644)
...+ . ...+++.... .....+.+++..+.+.|.+.+++.|++|+++++|+++..++++ | .|++.+ .+|
T Consensus 81 ~~~~-~-~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~-v-~v~~~~----~~g--- 149 (499)
T 2qa2_A 81 QGHF-G-GRPVDFGVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDH-V-VVEVEG----PDG--- 149 (499)
T ss_dssp EEEE-T-TEEEEGGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSC-E-EEEEEC----SSC---
T ss_pred ccee-c-ceecccccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCE-E-EEEEEc----CCC---
Confidence 1111 0 1111111111 1122578999999999999999999999999999999988755 4 366554 111
Q ss_pred cccccceEEEcCEEEEecCCCCcchHHHHHHcCCCcccccCcccceeEEEEEEeecCCCCCCCcEEEEeccCCCCCCcce
Q 006466 264 ENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQKTYGG 343 (644)
Q Consensus 264 ~~~~~g~~i~a~~vV~A~G~~s~l~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~h~~g~~~~~~~~g~ 343 (644)
..+++||+||+|||.+|.+|+++ ++..+ ...... .++.....++. .+.. .+... .+. |.
T Consensus 150 -----~~~~~a~~vVgADG~~S~VR~~l----g~~~~-~~~~~~--~~~~~~v~~~~---~~~~-~~~~~---~~~--g~ 208 (499)
T 2qa2_A 150 -----PRSLTTRYVVGCDGGRSTVRKAA----GFDFP-GTSASR--EMFLADIRGCE---ITPR-PIGET---VPL--GM 208 (499)
T ss_dssp -----EEEEEEEEEEECCCTTCHHHHHT----TCCCC-EECCCC--CEEEEEEESCC---CCCE-EEEEE---ETT--EE
T ss_pred -----cEEEEeCEEEEccCcccHHHHHc----CCCCC-CCCCcc--EEEEEEEEECC---CCcc-eEEEE---CCC--eE
Confidence 14799999999999999988865 55431 111111 12222222221 1222 22211 122 44
Q ss_pred EEEEEeCCCeEEEEEEEccCCCC---CCCCcHHHHHHhhcCCcchhcccCCceeeecceeeecCCcccCCcccCCCeEEE
Q 006466 344 SFLYHMNDRQIALGLVVALNYHN---PFLNPYEEFQKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAII 420 (644)
Q Consensus 344 ~~l~~~~~~~~~ig~~~~~d~~~---~~~~~~~~~~~~~~~p~i~~~l~~~~~i~~~~~~i~~gg~~~~~~~~~~~v~Li 420 (644)
.+++|.+++...+.+........ ...++.+..+.+... +...+...+ +.+.. .++ ......++|..+|++|+
T Consensus 209 ~~~~P~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~-~~~~~-~~~-~~~~~a~~~~~grv~L~ 283 (499)
T 2qa2_A 209 VMSAPLGDGVDRIIVCERGAPARRRTGPPPYQEVAAAWQRL--TGQDISHGE-PVWVS-AFG-DPARQVSAYRRGRVLLA 283 (499)
T ss_dssp EEEEECSSSCEEEEEEETTCCCCCCSSSCCHHHHHHHHHHH--HSCCCTTCE-EEEEE-EEC-CCEEECSCSEETTEEEC
T ss_pred EEEEEcCCCEEEEEEEecCCCCccccCCCCHHHHHHHHHHH--hCCCCCccc-eeEEE-EEe-CCcEEcccccCCCEEEE
Confidence 67889988877776654221111 112333333333221 000011111 11110 111 11123467888999999
Q ss_pred ccCCcccCCCCCcchHHHHHHHHHHHHHHhccccC---CchHHHHHHHHHHhHHHHHHHHHhcchhhhh
Q 006466 421 GCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE---DSNMEIYWDTLQKSWVWQELQRARNYRPAFE 486 (644)
Q Consensus 421 GDAA~~~~P~~g~G~~~A~~sa~~lA~~l~~~l~~---~~~l~~Ye~~~~~~~~~~~l~~~r~~~~~~~ 486 (644)
|||||.++|+.|||+|+||+||..||+.|...+.. ...|+.|+++++.. ..+.+..++.+..++.
T Consensus 284 GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~l~g~~~~~~L~~Ye~eR~~~-~~~~~~~s~~~~~l~~ 351 (499)
T 2qa2_A 284 GDSAHVHLPAGGQGMNVSVQDSVNLGWKLAAVVSGRAPAGLLDTYHEERHPV-GRRLLMNTQAQGMLFL 351 (499)
T ss_dssp GGGTEEECCCSSCHHHHHHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
T ss_pred ecccccCCCccccchhhhHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHH-HHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999887654 46799999998864 6666666666655554
No 10
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.96 E-value=7.5e-28 Score=258.94 Aligned_cols=340 Identities=14% Similarity=0.107 Sum_probs=195.2
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCC-CcccccCccChHHHHHHhhhhhhcCCCeeeeccCC
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVG-AHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSD 184 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g-~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~ 184 (644)
|++||+||||||+|+++|+.|++. |++|+||||.+... .....++.+.+.++ +++..++.............
T Consensus 1 m~~dV~IvGaG~aGl~~A~~L~~~------G~~v~v~E~~~~~~~~~~~~~g~l~~~~~-~~l~~lg~~~~~~~~~~~~~ 73 (394)
T 1k0i_A 1 MKTQVAIIGAGPSGLLLGQLLHKA------GIDNVILERQTPDYVLGRIRAGVLEQGMV-DLLREAGVDRRMARDGLVHE 73 (394)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHH------TCCEEEECSSCHHHHHTCCCCCEECHHHH-HHHHHTTCCHHHHHHCEEES
T ss_pred CCccEEEECCCHHHHHHHHHHHHC------CCCEEEEeCCCCCcccCCCceEeECHHHH-HHHHHcCCcHHHHhcCCccc
Confidence 358999999999999999999999 99999999987521 11123345666654 33333321100000000111
Q ss_pred cEEEeccCCccccC--CCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEe-CcCccccCCC
Q 006466 185 KFWFLTKDRAFSLP--SPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGT-NDMGIAKDGS 261 (644)
Q Consensus 185 ~~~~~~~~~~~~~~--~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~-~d~g~~~~G~ 261 (644)
.+.+........++ ........+.+.+..+.+.|.+.+.+.|++|+++++|+++..++++.+ .|++ .+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~-~v~~~~~-------- 144 (394)
T 1k0i_A 74 GVEIAFAGQRRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGERP-YVTFERD-------- 144 (394)
T ss_dssp CEEEEETTEEEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSC-EEEEEET--------
T ss_pred eEEEEECCceEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCce-EEEEecC--------
Confidence 22222211111111 101122356788999999999999999999999999999987643333 4665 33
Q ss_pred cccccccce--EEEcCEEEEecCCCCcchHHHHHHcCCCcccccCcccceeEEEEEE-eecCCCCCCCcEEEEeccCCCC
Q 006466 262 KKENFQRGV--ELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVW-EIDEGKHNPGEILHTLGWPLDQ 338 (644)
Q Consensus 262 ~~~~~~~g~--~i~a~~vV~A~G~~s~l~~~l~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~g~~~h~~g~~~~~ 338 (644)
|. +++||+||+|||.+|.+|+++ +... .......+..++..+. ..+.. .+ ...+. ..+
T Consensus 145 -------g~~~~~~a~~vV~AdG~~S~vr~~l----~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~----~~~ 205 (394)
T 1k0i_A 145 -------GERLRLDCDYIAGCDGFHGISRQSI----PAER-LKVFERVYPFGWLGLLADTPPV--SH-ELIYA----NHP 205 (394)
T ss_dssp -------TEEEEEECSEEEECCCTTCSTGGGS----CGGG-CEEEEEEEEEEEEEEEESSCCS--CS-SCEEE----CCT
T ss_pred -------CcEEEEEeCEEEECCCCCcHHHHhc----Cccc-cccccccccceeEEEecCCCCC--cc-ceEEE----EcC
Confidence 44 799999999999999998864 3221 0000111112222111 11111 11 11111 112
Q ss_pred CCcceEEEEEeCCCeEEEEEEEccCCCCCCCCcHHHHHHhhcC-Cc-chhcccCCceeeecceeeecCCcccCCcccCCC
Q 006466 339 KTYGGSFLYHMNDRQIALGLVVALNYHNPFLNPYEEFQKFKHH-PA-IKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPG 416 (644)
Q Consensus 339 ~~~g~~~l~~~~~~~~~ig~~~~~d~~~~~~~~~~~~~~~~~~-p~-i~~~l~~~~~i~~~~~~i~~gg~~~~~~~~~~~ 416 (644)
. +..|+++..++...+.+...........++.+.++.+... +. +...+........ ..++...+ ..++|..+|
T Consensus 206 ~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~gr 280 (394)
T 1k0i_A 206 R--GFALCSQRSATRSQYYVQVPLSEKVEDWSDERFWTELKARLPSEVAEKLVTGPSLEK--SIAPLRSF-VVEPMQHGR 280 (394)
T ss_dssp T--CCEEEEEEETTEEEEEEEECTTCCGGGCCHHHHHHHHHHTSCHHHHHHCCCCCEEEE--EEEEEEEE-EEECSEETT
T ss_pred C--ceEEEEecCCCcEEEEEEeCCCCCccccCHHHHHHHHHHhhCcccccccccCcceee--EEEEhhhh-hccccccCC
Confidence 2 2355566666666666554322111112333333333221 11 1111211122111 11121111 234677899
Q ss_pred eEEEccCCcccCCCCCcchHHHHHHHHHHHHHHhcccc--CCchHHHHHHHHHHhHHHHHHHHHhcchhhhh
Q 006466 417 GAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLH--EDSNMEIYWDTLQKSWVWQELQRARNYRPAFE 486 (644)
Q Consensus 417 v~LiGDAA~~~~P~~g~G~~~A~~sa~~lA~~l~~~l~--~~~~l~~Ye~~~~~~~~~~~l~~~r~~~~~~~ 486 (644)
++|||||||.++|+.|||+++||+||..||+.|...+. ...+|+.|+++++.. +.+.+..++.+..+++
T Consensus 281 v~LvGDAAh~~~P~~GqG~~~ai~da~~La~~L~~~~~~~~~~~L~~Y~~~r~~~-~~~~~~~s~~~~~~~~ 351 (394)
T 1k0i_A 281 LFLAGDAAHIVPPTGAKGLNLAASDVSTLYRLLLKAYREGRGELLERYSAICLRR-IWKAERFSWWMTSVLH 351 (394)
T ss_dssp EEECGGGTEECCGGGTCHHHHHHHHHHHHHHHHHHHHHHCCGGGGGGHHHHHHHH-HHHHHHHHHHHHHHHS
T ss_pred EEEEechhhcCCCcccchHHHHHHHHHHHHHHHHHHhccCchHHHHHHHHHHHHH-HHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999987653 356899999999865 6666666665555543
No 11
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.96 E-value=1.4e-27 Score=255.78 Aligned_cols=324 Identities=15% Similarity=0.118 Sum_probs=194.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcE
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (644)
.+||+||||||+|+++|+.|++. |++|+||||.+.++. ...+..+.+..+. ++..++..............+
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~------G~~v~viE~~~~~~~-~~~~~~l~~~~~~-~l~~~g~~~~~~~~~~~~~~~ 82 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQN------GWDVRLHEKSSELRA-FGAGIYLWHNGLR-VLEGLGALDDVLQGSHTPPTY 82 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSCCC-CSSEEEEEHHHHH-HHHHTTCHHHHHTTCBCCSCE
T ss_pred CCeEEEECCCHHHHHHHHHHHHC------CCCEEEEecCCCCCC-CCceEEeCccHHH-HHHHcCCHHHHHhhCCCccce
Confidence 58999999999999999999999 999999999987654 2234445555442 222221110000001111223
Q ss_pred EEeccCCcc-ccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccc
Q 006466 187 WFLTKDRAF-SLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKEN 265 (644)
Q Consensus 187 ~~~~~~~~~-~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~ 265 (644)
.+......+ .++.. ....+.++|..|.+.|.+.+++.|++|+++++|+++.. ++ .|++.+
T Consensus 83 ~~~~~g~~~~~~~~~--~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~~---~v~~~~------------ 143 (379)
T 3alj_A 83 ETWMHNKSVSKETFN--GLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADP--VG---RLTLQT------------ 143 (379)
T ss_dssp EEEETTEEEEEECGG--GCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET--TT---EEEETT------------
T ss_pred EEEeCCceeeeccCC--CCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe--CC---EEEECC------------
Confidence 333221100 11111 22368899999999999999999999999999999976 35 466655
Q ss_pred cccceEEEcCEEEEecCCCCcchHHHHHHcCCCcccccCccccee-EEEEEEeecC---CCCCCCcEEEEeccCCCCCCc
Q 006466 266 FQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYAL-GIKEVWEIDE---GKHNPGEILHTLGWPLDQKTY 341 (644)
Q Consensus 266 ~~~g~~i~a~~vV~A~G~~s~l~~~l~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~---~~~~~g~~~h~~g~~~~~~~~ 341 (644)
|.+++||+||+|||.+|.+++.+ +... .+...+. .+........ ....++...+.+.+ ..++
T Consensus 144 ---g~~~~ad~vV~AdG~~s~vr~~l----~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-- 209 (379)
T 3alj_A 144 ---GEVLEADLIVGADGVGSKVRDSI----GFKQ----DRWVSKDGLIRLIVPRMKKELGHGEWDNTIDMWNF-WPRV-- 209 (379)
T ss_dssp ---SCEEECSEEEECCCTTCHHHHHH----CCCE----EEEEEEEEEEEEEEECCHHHHCSSCTTSEEEEECC-SSSC--
T ss_pred ---CCEEEcCEEEECCCccHHHHHHh----cCCC----CcCcCCcEEEEEEechhhccCCcCCcccccccceE-ECCC--
Confidence 56899999999999999988876 3321 1111121 1222222210 11112333332211 1222
Q ss_pred ceEEEEEeCCCeEEEEEEEccCCCCCCCCcHHHHHHhh-cCCcchhcccCC---ceeeecceeeecCCcccCCcccCCCe
Q 006466 342 GGSFLYHMNDRQIALGLVVALNYHNPFLNPYEEFQKFK-HHPAIKPLLEGG---TVVQYGARTLNEGGLQSIPYPVFPGG 417 (644)
Q Consensus 342 g~~~l~~~~~~~~~ig~~~~~d~~~~~~~~~~~~~~~~-~~p~i~~~l~~~---~~i~~~~~~i~~gg~~~~~~~~~~~v 417 (644)
+..|++|.+++...+.+....+...+ ....+.+..|. ..+.+.++++.. ....+. +.. ...+++|..+|+
T Consensus 210 ~~~~~~p~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~---~~~--~~~~~~~~~~rv 283 (379)
T 3alj_A 210 QRILYSPCNENELYLGLMAPAADPRG-SSVPIDLEVWVEMFPFLEPCLIEAAKLKTARYD---KYE--TTKLDSWTRGKV 283 (379)
T ss_dssp CEEEEEECSSSEEEEEEEECTTCTTT-TCSSCCHHHHHHHCGGGHHHHHHHHTCTTCCEE---EEE--EEEESCSEETTE
T ss_pred CEEEEEECCCCcEEEEEEecCCCCCH-HHHHHHHhcCCchhccHHHHHhhCCccceEEec---ccc--cCCCCCcccCcE
Confidence 44788999998877776654311111 01111122221 122222333211 111111 111 113467888999
Q ss_pred EEEccCCcccCCCCCcchHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHhHHHHHHHHH
Q 006466 418 AIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHEDSNMEIYWDTLQKSWVWQELQRA 478 (644)
Q Consensus 418 ~LiGDAA~~~~P~~g~G~~~A~~sa~~lA~~l~~~l~~~~~l~~Ye~~~~~~~~~~~l~~~ 478 (644)
+|||||||.++|+.|||+++||+||..||+.|........+|+.|+++++.. +.+.+..+
T Consensus 284 ~lvGDAAh~~~P~~GqG~~~ai~da~~La~~L~~~~~~~~~l~~Y~~~r~~~-~~~~~~~s 343 (379)
T 3alj_A 284 ALVGDAAHAMCPALAQGAGCAMVNAFSLSQDLEEGSSVEDALVAWETRIRPI-TDRCQALS 343 (379)
T ss_dssp EECTHHHHCCCGGGSCHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHH-HHHHHHHH
T ss_pred EEEEcccCCCCcchhhhHHHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHH-HHHHHHHh
Confidence 9999999999999999999999999999999976421145799999999875 55544444
No 12
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.95 E-value=3.8e-27 Score=264.75 Aligned_cols=336 Identities=15% Similarity=0.065 Sum_probs=197.1
Q ss_pred cccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCC
Q 006466 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSD 184 (644)
Q Consensus 105 ~~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~ 184 (644)
.+++|||||||||+||++|+.|++. |++|+||||.+.... ...+..+.++.+ +++..++.............
T Consensus 47 ~~~~DVvIVGaG~aGL~~A~~La~~------G~~V~VlEr~~~~~~-~~r~~~l~~~s~-~~l~~lGl~~~l~~~~~~~~ 118 (570)
T 3fmw_A 47 ALTTDVVVVGGGPVGLMLAGELRAG------GVGALVLEKLVEPVG-HDRAGALHIRTV-ETLDLRGLLDRFLEGTQVAK 118 (570)
T ss_dssp ----CEEEECCSHHHHHHHHHHHHT------TCCEEEEBSCSSCCC-SSSCCCBCHHHH-HHHHTTTCHHHHTTSCCBCS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHC------CCCEEEEcCCCCCCC-CceEEEECHHHH-HHHHHcCChHHHHhcCcccC
Confidence 3579999999999999999999999 999999999987653 234667777665 33333221100000000000
Q ss_pred cEEEeccCC--ccccCCC-CCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEe--CcCccccC
Q 006466 185 KFWFLTKDR--AFSLPSP-FSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGT--NDMGIAKD 259 (644)
Q Consensus 185 ~~~~~~~~~--~~~~~~~-~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~--~d~g~~~~ 259 (644)
. ..+.... .+.+... ......+.+++..+.+.|.+.+++.|++|+++++|++++.++++ | .|++ .+
T Consensus 119 ~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~-v-~v~~~~~~------ 189 (570)
T 3fmw_A 119 G-LPFAGIFTQGLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEA-V-EVTVAGPS------ 189 (570)
T ss_dssp B-CCBTTBCTTCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSC-E-EEEEEETT------
T ss_pred C-ceeCCcccccccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCe-E-EEEEEeCC------
Confidence 0 0000000 1111111 11223567999999999999999999999999999999887755 3 3554 33
Q ss_pred CCcccccccc-eEEEcCEEEEecCCCCcchHHHHHHcCCCcccccCcccceeEEEEEEeecCCCCCCCcEEEEeccCCCC
Q 006466 260 GSKKENFQRG-VELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQ 338 (644)
Q Consensus 260 G~~~~~~~~g-~~i~a~~vV~A~G~~s~l~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~h~~g~~~~~ 338 (644)
| .+++||+||+|||.+|.+|+++ ++..+ ...... .++...+..... . . .+.|...
T Consensus 190 ---------G~~~~~a~~vV~ADG~~S~vR~~l----Gi~~~-~~~~~~--~~~~~~v~~~~~--~--~---~~~~~~~- 245 (570)
T 3fmw_A 190 ---------GPYPVRARYGVGCDGGRSTVRRLA----ADRFP-GTEATV--RALIGYVTTPER--E--V---PRRWERT- 245 (570)
T ss_dssp ---------EEEEEEESEEEECSCSSCHHHHHT----TCCCC-CCCCCE--EEEEEECCCCSC--S--S---CCCCCCC-
T ss_pred ---------CcEEEEeCEEEEcCCCCchHHHHc----CCCCc-cceeee--EEEEEEEEecCC--C--c---ceEEEec-
Confidence 5 6899999999999999988865 55531 111111 122111111111 1 0 0122111
Q ss_pred CCcceEEE-EEeCCCeE-EEEEEEccCCC---CCCCCcHHHHHHhhcCCcchhcccCCceeeecceeeecCCcccCCccc
Q 006466 339 KTYGGSFL-YHMNDRQI-ALGLVVALNYH---NPFLNPYEEFQKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPV 413 (644)
Q Consensus 339 ~~~g~~~l-~~~~~~~~-~ig~~~~~d~~---~~~~~~~~~~~~~~~~p~i~~~l~~~~~i~~~~~~i~~gg~~~~~~~~ 413 (644)
..|..|+ +|..++.. ++.+....... ....+..+..+.+... +...+...+...+.. .++. .....++|.
T Consensus 246 -~~G~~~~~~P~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~-~~~~-~~~~a~~~~ 320 (570)
T 3fmw_A 246 -PDGILVLAFPPEGGLGPGWSSSSTGHSPAADEGPVTLEDLGAAVARV--RGTPLTLTEPVSWLS-RFGD-ASRQAKRYR 320 (570)
T ss_dssp -CSSCEEECCCC------CEEEEEESCC-----CCCCHHHHHHHTTSS--SSCCCCCCSCCEEEE-EECC-CCEECSCSE
T ss_pred -CCEEEEEEeecCCCeEEEEEEEeCCCCccccccCCCHHHHHHHHHHH--hhcccccceeeeeeE-Eeec-ccccccccc
Confidence 2233555 68887766 56555432111 1122333333334321 111111111121110 1111 112346788
Q ss_pred CCCeEEEccCCcccCCCCCcchHHHHHHHHHHHHHHhccccC---CchHHHHHHHHHHhHHHHHHHHHhcchhhhhc
Q 006466 414 FPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE---DSNMEIYWDTLQKSWVWQELQRARNYRPAFEY 487 (644)
Q Consensus 414 ~~~v~LiGDAA~~~~P~~g~G~~~A~~sa~~lA~~l~~~l~~---~~~l~~Ye~~~~~~~~~~~l~~~r~~~~~~~~ 487 (644)
.+|++|+|||||.++|+.|||+|+||+||..||+.|...+.. ...|+.|+++++.. ....+..++.+..+|..
T Consensus 321 ~grv~LvGDAAH~~~P~~GqG~n~gl~DA~~La~~La~~~~g~~~~~lL~~Ye~eR~~~-~~~~~~~s~~~~~l~~~ 396 (570)
T 3fmw_A 321 SGRVLLAGDAAHVHFPIGGQGLNTGLQDAVNLGWKLAARVRGWGSEELLDTYHDERHPV-AERVLLNTRAQLALMRP 396 (570)
T ss_dssp ETTEEECGGGTEECCCCSSCHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHSCS
T ss_pred cCCEEEEEecceecCCCcCcCHhHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcC
Confidence 899999999999999999999999999999999999887644 46799999999864 66777777777777653
No 13
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=99.95 E-value=9.6e-27 Score=266.09 Aligned_cols=353 Identities=16% Similarity=0.138 Sum_probs=205.4
Q ss_pred ccccEEEECCCHHHHHHHHHHHh-----hchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeee
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQ-----LCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVP 180 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~-----~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~ 180 (644)
.++||+||||||+||++|+.|++ . |++|+||||.+.... ...+..+.++++ +++..++..+......
T Consensus 7 ~~~dVlIVGaGpaGL~lA~~La~~~~~~~------Gi~v~viE~~~~~~~-~gra~~l~~~tl-e~l~~lGl~~~l~~~~ 78 (665)
T 1pn0_A 7 SYCDVLIVGAGPAGLMAARVLSEYVRQKP------DLKVRIIDKRSTKVY-NGQADGLQCRTL-ESLKNLGLADKILSEA 78 (665)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHHHST------TCCEEEECSSSSCCC-SCSCCEECHHHH-HHHHTTTCHHHHHTTC
T ss_pred CCCcEEEECcCHHHHHHHHHHhccccccC------CCCEEEEeCCCCCCC-CCceeEEChHHH-HHHHHCCCHHHHHHhc
Confidence 36899999999999999999999 8 999999999876542 224556777776 4444433211000001
Q ss_pred ccCCcEEEeccC--Ccc----ccCC---CCCCCCcEEEcHHHHHHHHHHHHHhcC---CEEecCceEEEEEEcC------
Q 006466 181 VSSDKFWFLTKD--RAF----SLPS---PFSNRGNYVISLSQLVRWLGGKAEELG---VEIYPGFAASEILYDA------ 242 (644)
Q Consensus 181 ~~~~~~~~~~~~--~~~----~~~~---~~~~~~~~~v~r~~l~~~L~~~a~~~G---v~i~~g~~v~~v~~~~------ 242 (644)
.....+.++... ..+ .++. .......+.+++..+.++|.+.+++.| ++|.++++++++..++
T Consensus 79 ~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~l~q~~le~~L~~~~~~~g~~~v~v~~g~~v~~~~~d~~~~~~~ 158 (665)
T 1pn0_A 79 NDMSTIALYNPDENGHIRRTDRIPDTLPGISRYHQVVLHQGRIERRILDSIAEISDTRIKVERPLIPEKMEIDSSKAEDP 158 (665)
T ss_dssp BCCCEEEEEEECTTSCEEEEEEEESSCTTSCSSCCEECCHHHHHHHHHHHHHHHHTTSSCEECSEEEEEEEECGGGTTCT
T ss_pred cccceEEEEeCCCCcceEeecccCcccCCCCCCeeEEeeHHHHHHHHHHHHHhcCCCceEEEeCCEEEEEEecCcccccC
Confidence 111122222211 111 1111 112234577999999999999999887 9999999999998875
Q ss_pred -CCcEEEEEeCcCc-----------cccCCCccccc----------------ccc--eEEEcCEEEEecCCCCcchHHHH
Q 006466 243 -DNKVIGIGTNDMG-----------IAKDGSKKENF----------------QRG--VELRGRITLLAEGCRGSLSEKLI 292 (644)
Q Consensus 243 -~g~v~gV~~~d~g-----------~~~~G~~~~~~----------------~~g--~~i~a~~vV~A~G~~s~l~~~l~ 292 (644)
+..| .|++.+.. ...+|-...++ .+| .+++||+||+|||.+|.+|+++
T Consensus 159 ~~~~V-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~G~~~~i~A~~VVGADG~~S~VR~~l- 236 (665)
T 1pn0_A 159 EAYPV-TMTLRYMSEDESTPLQFGHKTENGLFRSNLQTQEEEDANYRLPEGKEAGEIETVHCKYVIGCDGGHSWVRRTL- 236 (665)
T ss_dssp TCCCE-EEEEEECCGGGSCCCTTCCCCCSSSCCCHHHHHHHHHTSCCCSTTCCTTCEEEEEEEEEEECCCTTCHHHHHH-
T ss_pred CCCCE-EEEEEecccccccccccccccccccccccccccccccccccccccCCCCceEEEEeCEEEeccCCCCHHHHhc-
Confidence 1223 45443210 00001000000 123 6799999999999999999976
Q ss_pred HHcCCCcccccCcccceeEEEEEEeecCCCCCCCcEEEEeccCCCCCCcceEEEEEeCCCeEEEEEEEccCC------CC
Q 006466 293 KNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVALNY------HN 366 (644)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~h~~g~~~~~~~~g~~~l~~~~~~~~~ig~~~~~d~------~~ 366 (644)
++... ........++..+........ ....... +. . ..|..+++|.+++.+.+.+...... ..
T Consensus 237 ---g~~~~--g~~~~~~~~v~d~~~~~~~p~-~~~~~~~--~~-~--~~g~~~~~P~~~~~~r~~~~~~~~~~~~~~~~~ 305 (665)
T 1pn0_A 237 ---GFEMI--GEQTDYIWGVLDAVPASNFPD-IRSRCAI--HS-A--ESGSIMIIPRENNLVRFYVQLQARAEKGGRVDR 305 (665)
T ss_dssp ---TCCCE--EEEEEEEEEEEEEEEECCCTT-TTSEEEE--EC-S--SSCEEEEEECSTTCEEEEEEECC----------
T ss_pred ---CCCCC--CCCccEEEEEEEEEECCCCCC-cceEEEE--Ee-C--CCceEEEEEcCCCEEEEEEEeCCccccccccCc
Confidence 55421 111111112222111111000 1111111 11 1 1245678899888777766543321 11
Q ss_pred CCCCcHHHHHHhhc--CCcchhcccCCceeeecceeeecCCcccCCccc-CCCeEEEccCCcccCCCCCcchHHHHHHHH
Q 006466 367 PFLNPYEEFQKFKH--HPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPV-FPGGAIIGCAAGFLNVPKIKGTHTAMKSGM 443 (644)
Q Consensus 367 ~~~~~~~~~~~~~~--~p~i~~~l~~~~~i~~~~~~i~~gg~~~~~~~~-~~~v~LiGDAA~~~~P~~g~G~~~A~~sa~ 443 (644)
...++.+..+.++. .|....+ +.+.+- .+...+....++|. .+||+|+|||||.++|+.|||+|+||+||.
T Consensus 306 ~~~t~e~~~~~~~~~~~~~~~~~----~~~~~~--~~~~~~~r~a~~~~~~gRV~L~GDAAH~~~P~~GqG~N~gi~DA~ 379 (665)
T 1pn0_A 306 TKFTPEVVIANAKKIFHPYTFDV----QQLDWF--TAYHIGQRVTEKFSKDERVFIAGDACHTHSPKAGQGMNTSMMDTY 379 (665)
T ss_dssp CCCCHHHHHHHHHHHHTTSCCEE----EEEEEE--EEEEEEEEECSCSEETTTEEECGGGTEECCSTTCCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHhCcccCce----eeEEEE--EeeeccceehhhcccCCCEEEEECccccCCCcccCCcchhHHHHH
Confidence 12333333333321 1211000 111111 01011112345777 699999999999999999999999999999
Q ss_pred HHHHHHhccccC---CchHHHHHHHHHHhHHHHHHHHHhcchhhhh
Q 006466 444 LAAEAGFGVLHE---DSNMEIYWDTLQKSWVWQELQRARNYRPAFE 486 (644)
Q Consensus 444 ~lA~~l~~~l~~---~~~l~~Ye~~~~~~~~~~~l~~~r~~~~~~~ 486 (644)
.||+.|+..+.. ...|+.|+++++.. ..+.+..++.+..+|.
T Consensus 380 nLawkLa~vl~g~a~~~lL~tYe~eR~p~-a~~~i~~s~~~~~l~~ 424 (665)
T 1pn0_A 380 NLGWKLGLVLTGRAKRDILKTYEEERQPF-AQALIDFDHQFSRLFS 424 (665)
T ss_dssp HHHHHHHHHHTTCBCGGGGHHHHHHHHHH-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCcHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhc
Confidence 999999887654 46899999999974 6666777777777764
No 14
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.95 E-value=1.3e-27 Score=257.60 Aligned_cols=331 Identities=14% Similarity=0.061 Sum_probs=203.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhh------hcCCCeeee
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWK------QEEAPIRVP 180 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~------~~~~~~~~~ 180 (644)
.+||+|||||++|+++|+.|++. |++|+||||.+.+. ...++..+.+..+. ++..++ ....+.
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~------G~~V~viE~~~~~~-~~~~~~~l~~~~~~-~l~~~g~~~~~~~~~~~~--- 74 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQ------GHRVVVVEQARRER-AINGADLLKPAGIR-VVEAAGLLAEVTRRGGRV--- 74 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSCCC----CCCCEECHHHHH-HHHHTTCHHHHHHTTCEE---
T ss_pred cCCEEEECcCHHHHHHHHHHHhC------CCcEEEEeCCCCCC-ccCceeeECchHHH-HHHHcCcHHHHHHhCCCc---
Confidence 58999999999999999999999 99999999987652 22345666665542 222221 111111
Q ss_pred ccCCcEEEeccCC--ccccCC--CCCCCCcEEEcHHHHHHHHHHHHHhc-CCEEecCceEEEEEEcCCCcEE-EEEeCcC
Q 006466 181 VSSDKFWFLTKDR--AFSLPS--PFSNRGNYVISLSQLVRWLGGKAEEL-GVEIYPGFAASEILYDADNKVI-GIGTNDM 254 (644)
Q Consensus 181 ~~~~~~~~~~~~~--~~~~~~--~~~~~~~~~v~r~~l~~~L~~~a~~~-Gv~i~~g~~v~~v~~~~~g~v~-gV~~~d~ 254 (644)
..+.+..... ...++. .......+.++|..|.+.|.+.+++. |++|+++++|+++..++++ ++ .|++.+
T Consensus 75 ---~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~-v~g~v~~~~- 149 (399)
T 2x3n_A 75 ---RHELEVYHDGELLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERH-AIDQVRLND- 149 (399)
T ss_dssp ---ECEEEEEETTEEEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTS-CEEEEEETT-
T ss_pred ---ceeEEEeCCCCEEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCc-eEEEEEECC-
Confidence 1111221111 111111 11112257899999999999999998 9999999999999887754 32 466655
Q ss_pred ccccCCCcccccccceEEEcCEEEEecCCCCcchHHHHHHcCCCcccccCcccce---eEEEEEEeecCCCCCCCcEEEE
Q 006466 255 GIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYA---LGIKEVWEIDEGKHNPGEILHT 331 (644)
Q Consensus 255 g~~~~G~~~~~~~~g~~i~a~~vV~A~G~~s~l~~~l~~~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~g~~~h~ 331 (644)
|.+++||+||+|||.+|.+++.+ ++... ...+ .++ .++...+..+ . +... ..
T Consensus 150 --------------g~~~~ad~vV~AdG~~s~vr~~l----g~~~~-~~~p-~~~~~~~~~~~~~~~~--~--~~~~-~~ 204 (399)
T 2x3n_A 150 --------------GRVLRPRVVVGADGIASYVRRRL----LDIDV-ERRP-YPSPMLVGTFALAPCV--A--ERNR-LY 204 (399)
T ss_dssp --------------SCEEEEEEEEECCCTTCHHHHHT----SCCCC-CCCC-CSSCEEEEEEECCHHH--H--HCEE-EE
T ss_pred --------------CCEEECCEEEECCCCChHHHHHh----CCCcc-ccCC-CCCCceEEEEEEecCC--C--CCcc-EE
Confidence 56899999999999999988754 54421 1100 222 2332211111 0 1112 22
Q ss_pred eccCCCCCCcceEEEEEeCCCeEEEEEEEccCCCCC---CCCcHHHHHHhhc-CCcch-hcccCCceeeecceeeecCCc
Q 006466 332 LGWPLDQKTYGGSFLYHMNDRQIALGLVVALNYHNP---FLNPYEEFQKFKH-HPAIK-PLLEGGTVVQYGARTLNEGGL 406 (644)
Q Consensus 332 ~g~~~~~~~~g~~~l~~~~~~~~~ig~~~~~d~~~~---~~~~~~~~~~~~~-~p~i~-~~l~~~~~i~~~~~~i~~gg~ 406 (644)
++ +. .+..|++|.+++.+.+.+....+.... ..++.+..+.+.. .+.+. ..++....... ..++....
T Consensus 205 ~~----~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 277 (399)
T 2x3n_A 205 VD----SQ-GGLAYFYPIGFDRARLVVSFPREEARELMADTRGESLRRRLQRFVGDESAEAIAAVTGTSR--FKGIPIGY 277 (399)
T ss_dssp EC----TT-SCEEEEEEETTTEEEEEEECCHHHHHHHHHSTTSHHHHHHHHTTCCGGGHHHHHTCCCSTT--CEECCCCC
T ss_pred Ec----CC-CcEEEEEEcCCCEEEEEEEeCccccccccccCCHHHHHHHHhhcCCcchhhHHhcCCccce--EEechhhc
Confidence 21 20 245788898887666655322110000 0223333334432 23331 22221110000 11122111
Q ss_pred ccCCcccCCCeEEEccCCcccCCCCCcchHHHHHHHHHHHHHHhccccC----CchHHHHHHHHHHhHHHHHHHHHhcch
Q 006466 407 QSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE----DSNMEIYWDTLQKSWVWQELQRARNYR 482 (644)
Q Consensus 407 ~~~~~~~~~~v~LiGDAA~~~~P~~g~G~~~A~~sa~~lA~~l~~~l~~----~~~l~~Ye~~~~~~~~~~~l~~~r~~~ 482 (644)
...++|..+|++|+|||||.++|+.|||+++||+||..||+.|.+.+.. ..+|+.|+++++.. +.+.+..++.+.
T Consensus 278 ~~~~~~~~~rv~lvGDAAh~~~P~~GqG~~~al~da~~La~~L~~~~~~~~~~~~~l~~Y~~~r~~~-~~~~~~~s~~~~ 356 (399)
T 2x3n_A 278 LNLDRYWADNVAMLGDAIHNVHPITGQGMNLAIEDASALADALDLALRDACALEDALAGYQAERFPV-NQAIVSYGHALA 356 (399)
T ss_dssp EECSCSEETTEEECGGGTEECCGGGCCHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHH-HHHHHHHHHHHH
T ss_pred ccccccccCcEEEEechhccCCCcccccHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHHhccH-HHHHHHHHHHhh
Confidence 2456788899999999999999999999999999999999999987642 35799999999875 777778888777
Q ss_pred hhhh
Q 006466 483 PAFE 486 (644)
Q Consensus 483 ~~~~ 486 (644)
.+|.
T Consensus 357 ~~~~ 360 (399)
T 2x3n_A 357 TSLE 360 (399)
T ss_dssp HHTT
T ss_pred hhhc
Confidence 7774
No 15
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.95 E-value=8.8e-27 Score=260.94 Aligned_cols=332 Identities=19% Similarity=0.130 Sum_probs=196.4
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhh------cCCCeee
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQ------EEAPIRV 179 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~------~~~~~~~ 179 (644)
+++|||||||||+||++|+.|++. |++|+||||.+.++.. ..+..+.++.+ +++..++. ...+...
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~------G~~v~viEr~~~~~~~-~~~~~l~~~~~-~~l~~lGl~~~~~~~~~~~~~ 75 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQ------GVRVLVVERRPGLSPY-PRAAGQNPRTM-ELLRIGGVADEVVRADDIRGT 75 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTT------TCCEEEECSSSSCCCC-CCSCCBCHHHH-HHHHHTTCHHHHHHSCCSSCT
T ss_pred ccCcEEEECcCHHHHHHHHHHHHC------CCCEEEEeCCCCCCCC-CccceECHHHH-HHHHHcCCHHHHHhhCCCccc
Confidence 468999999999999999999999 9999999999876542 34666777765 33333321 1111110
Q ss_pred e----------ccCCcEEEeccCCcccc---C-CCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCC-
Q 006466 180 P----------VSSDKFWFLTKDRAFSL---P-SPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADN- 244 (644)
Q Consensus 180 ~----------~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g- 244 (644)
. .....+..+.. .++. . ........+.+++..|.+.|.+.+++.|++|+++++|++++.++++
T Consensus 76 ~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~ 153 (535)
T 3ihg_A 76 QGDFVIRLAESVRGEILRTVSE--SFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDA 153 (535)
T ss_dssp TSCCEEEEESSSSSCEEEEEES--CHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGG
T ss_pred ccceeeeEEeccCCceeeeccc--cccccccccccCCCCcccccCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCc
Confidence 0 00111110000 0000 0 0011223567899999999999999999999999999999988752
Q ss_pred --cEEEEEeCcCccccCCCcccccccceEEEcCEEEEecCCCCcchHHHHHHcCCCcccccCcccceeEEEEEEeecCCC
Q 006466 245 --KVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGK 322 (644)
Q Consensus 245 --~v~gV~~~d~g~~~~G~~~~~~~~g~~i~a~~vV~A~G~~s~l~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 322 (644)
.| .|++.+ .+| ..+++||+||+|||.+|.+++++ ++..+ ........+.+ .+..+...
T Consensus 154 ~~~v-~v~~~~----~~~--------~~~i~a~~vV~AdG~~S~vR~~l----gi~~~-~~~~~~~~~~~--~~~~~~~~ 213 (535)
T 3ihg_A 154 GAGV-TARLAG----PDG--------EYDLRAGYLVGADGNRSLVRESL----GIGRY-GHGTLTHMVGV--IFDADLSG 213 (535)
T ss_dssp CSEE-EEEEEE----TTE--------EEEEEEEEEEECCCTTCHHHHHT----TCCEE-EEEEEEEEEEE--EEECCGGG
T ss_pred cccE-EEEEEc----CCC--------eEEEEeCEEEECCCCcchHHHHc----CCCcC-CCCccceEEEE--EEeccChh
Confidence 23 355443 111 26799999999999999888865 65531 11111111111 11211111
Q ss_pred C--CCCcEEEEeccCCCCCCcceEEEEEeCC-CeEEEEEEEccCCCC--CCCCcHHHHHHhhc---CCcchhcccCCcee
Q 006466 323 H--NPGEILHTLGWPLDQKTYGGSFLYHMND-RQIALGLVVALNYHN--PFLNPYEEFQKFKH---HPAIKPLLEGGTVV 394 (644)
Q Consensus 323 ~--~~g~~~h~~g~~~~~~~~g~~~l~~~~~-~~~~ig~~~~~d~~~--~~~~~~~~~~~~~~---~p~i~~~l~~~~~i 394 (644)
. ......+++ ..+. +..++++..+ +...+.+....+... +..++.+..+.++. .+... .+..
T Consensus 214 ~~~~~~~~~~~~---~~p~--~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~l~~~~~~~~~~-----~~~~ 283 (535)
T 3ihg_A 214 IMEPGTTGWYYL---HHPE--FKGTFGPTDRPDRHTLFVEYDPDEGERPEDFTPQRCVELIGLALDAPEVK-----PELV 283 (535)
T ss_dssp TSCTTCCEEEEE---ECSS--CEEEEEECSSTTEEEEEEEECTTTTCCGGGCCHHHHHHHHHHHHTCSSCC-----CEEE
T ss_pred hccCCceEEEEE---ECCC--ceEEEEEecCCCEEEEEEeeCccccCccccCCHHHHHHHHHHHhCCCCCc-----eeEE
Confidence 1 111222222 1222 3367788765 455544444332111 11232222222221 11111 0111
Q ss_pred eecceeeecCCcccCCcccCCCeEEEccCCcccCCCCCcchHHHHHHHHHHHHHHhccccC---CchHHHHHHHHHHhHH
Q 006466 395 QYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE---DSNMEIYWDTLQKSWV 471 (644)
Q Consensus 395 ~~~~~~i~~gg~~~~~~~~~~~v~LiGDAA~~~~P~~g~G~~~A~~sa~~lA~~l~~~l~~---~~~l~~Ye~~~~~~~~ 471 (644)
......+ .....++|..+|++|+|||||.++|+.|||+|+||+||..||+.|...+.. ...|+.|+++++.. .
T Consensus 284 ~~~~~~~---~~~~a~~~~~grv~LvGDAAH~~~P~~GqG~n~ai~DA~~La~~La~~l~g~~~~~lL~~Ye~eR~p~-a 359 (535)
T 3ihg_A 284 DIQGWEM---AARIAERWREGRVFLAGDAAKVTPPTGGMSGNAAVADGFDLAWKLAAVLQGQAGAGLLDTYEDERKVA-A 359 (535)
T ss_dssp EEEEEEE---EEEEESCSEETTEEECTTTTEECCSTTSCHHHHHHHHHHHHHHHHHHHHTTSSCTTHHHHHHHHHHHH-H
T ss_pred EeeEeee---eEEEECccccCCEEEEecccccCCCccCCccccccccHHHHHHHHHHHhcCCCcHHHHHhhHHHHHHH-H
Confidence 1110011 112345788899999999999999999999999999999999999987654 56799999999974 5
Q ss_pred HHHHHHHhcc
Q 006466 472 WQELQRARNY 481 (644)
Q Consensus 472 ~~~l~~~r~~ 481 (644)
.+.+..++..
T Consensus 360 ~~~~~~s~~~ 369 (535)
T 3ihg_A 360 ELVVAEALAI 369 (535)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 5555555543
No 16
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.95 E-value=1.8e-26 Score=249.66 Aligned_cols=334 Identities=18% Similarity=0.201 Sum_probs=192.1
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCCe-EEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCC
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLS-VCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSD 184 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~-V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~ 184 (644)
..+||+||||||+||++|+.|++. |++ |+||||.+.++. ...|..+.+..+. ++..++.............
T Consensus 3 ~~~dVvIVGaG~aGl~~A~~L~~~------G~~~v~v~E~~~~~~~-~g~g~~l~~~~~~-~l~~lg~~~~l~~~~~~~~ 74 (410)
T 3c96_A 3 EPIDILIAGAGIGGLSCALALHQA------GIGKVTLLESSSEIRP-LGVGINIQPAAVE-ALAELGLGPALAATAIPTH 74 (410)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT------TCSEEEEEESSSSCCC-CSCEEEECHHHHH-HHHHTTCHHHHHHHSEEEC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhC------CCCeEEEEECCCCccc-ceeEEEEChHHHH-HHHHCCChHHHHhhCCCcc
Confidence 358999999999999999999999 999 999999987653 2245556666542 2222221100000000111
Q ss_pred cEEEeccCCcc--ccCC---CCCCCCcEEEcHHHHHHHHHHHHHh-cC-CEEecCceEEEEEEcCCCcEEEEEeCcCccc
Q 006466 185 KFWFLTKDRAF--SLPS---PFSNRGNYVISLSQLVRWLGGKAEE-LG-VEIYPGFAASEILYDADNKVIGIGTNDMGIA 257 (644)
Q Consensus 185 ~~~~~~~~~~~--~~~~---~~~~~~~~~v~r~~l~~~L~~~a~~-~G-v~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~ 257 (644)
.+.+....... ..+. .......+.++|..|.+.|.+.+++ .| ++|+++++|+++.. +++ | .|++.+.
T Consensus 75 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~-v-~v~~~~~--- 148 (410)
T 3c96_A 75 ELRYIDQSGATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-RDG-R-VLIGARD--- 148 (410)
T ss_dssp EEEEECTTSCEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETT-E-EEEEEEE---
T ss_pred eEEEEcCCCCEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCc-c-EEEEecC---
Confidence 12222211110 0110 0011235789999999999999987 46 68999999999988 544 4 3554320
Q ss_pred cCCCcccccccceEEEcCEEEEecCCCCcchHHHHHHcCCCcccccCcccceeE-EEEEEeecCCCCCCCcEEEEeccCC
Q 006466 258 KDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALG-IKEVWEIDEGKHNPGEILHTLGWPL 336 (644)
Q Consensus 258 ~~G~~~~~~~~g~~i~a~~vV~A~G~~s~l~~~l~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~g~~~h~~g~~~ 336 (644)
.+|+ ..+++||+||+|||.+|.+|+.+ +... ..+...+.. +......+ ....+.....++.
T Consensus 149 ~~g~-------~~~~~ad~vV~AdG~~S~vR~~l----~~~~---~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~-- 210 (410)
T 3c96_A 149 GHGK-------PQALGADVLVGADGIHSAVRAHL----HPDQ---RPLSHGGITMWRGVTEFD--RFLDGKTMIVAND-- 210 (410)
T ss_dssp TTSC-------EEEEEESEEEECCCTTCHHHHHH----CTTC---CCCEEEEEEEEEEEEEES--CCTTSSEEEEEEC--
T ss_pred CCCC-------ceEEecCEEEECCCccchhHHHh----cCCC---CCCCcCCeeEEEeecccc--cccCCCeEEEecC--
Confidence 1122 15799999999999999999977 2221 011111111 11111211 1223333333432
Q ss_pred CCCCcceEEEEEeCC-----CeEEEEEEEcc--C------CCCC---CCCcHHHHHHhhcC-C---cchhcccCCcee-e
Q 006466 337 DQKTYGGSFLYHMND-----RQIALGLVVAL--N------YHNP---FLNPYEEFQKFKHH-P---AIKPLLEGGTVV-Q 395 (644)
Q Consensus 337 ~~~~~g~~~l~~~~~-----~~~~ig~~~~~--d------~~~~---~~~~~~~~~~~~~~-p---~i~~~l~~~~~i-~ 395 (644)
.. .+..++||..+ +...+.+.... + .... .....+..+.+... + .+..+++....+ .
T Consensus 211 ~~--~~~~~~~p~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~ 288 (410)
T 3c96_A 211 EH--WSRLVAYPISARHAAEGKSLVNWVCMVPSAAVGQLDNEADWNRDGRLEDVLPFFADWDLGWFDIRDLLTRNQLILQ 288 (410)
T ss_dssp TT--CCEEEEEECCHHHHTTTCEEEEEEEEEEHHHHCCCCSSCCTTCBCCHHHHHHHHTTCCBTTBCHHHHHHTCSEEEE
T ss_pred CC--CcEEEEEecCCcccCCCCcEEEEEEEecCcccccCCCccccCCCCCHHHHHHHhcCCCCchhHHHHHHhcCcccce
Confidence 11 13467888752 33333333211 0 0011 11223333344332 1 234444433222 1
Q ss_pred ecceeeecCCcccCCcccCCCeEEEccCCcccCCCCCcchHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHhHHHHHH
Q 006466 396 YGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHEDSNMEIYWDTLQKSWVWQEL 475 (644)
Q Consensus 396 ~~~~~i~~gg~~~~~~~~~~~v~LiGDAA~~~~P~~g~G~~~A~~sa~~lA~~l~~~l~~~~~l~~Ye~~~~~~~~~~~l 475 (644)
+. + .....+++|..+|++|||||||.++|+.|||+++||+||..||+.|........+|+.|+++++.. +.+.+
T Consensus 289 ~~---~--~~~~~~~~~~~grv~LvGDAAh~~~P~~GqG~n~ai~Da~~La~~L~~~~~~~~~L~~Ye~~r~~~-~~~~~ 362 (410)
T 3c96_A 289 YP---M--VDRDPLPHWGRGRITLLGDAAHLMYPMGANGASQAILDGIELAAALARNADVAAALREYEEARRPT-ANKII 362 (410)
T ss_dssp EE---E--EECCCCSCCCBTTEEECTHHHHCCCSSTTCTHHHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHHH-HHHHH
T ss_pred ee---c--ccCCCccccccCCEEEEecccCCCCCccchhHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHH-HHHHH
Confidence 11 1 111235688899999999999999999999999999999999999987422246799999999864 55444
Q ss_pred HHHh
Q 006466 476 QRAR 479 (644)
Q Consensus 476 ~~~r 479 (644)
..++
T Consensus 363 ~~s~ 366 (410)
T 3c96_A 363 LANR 366 (410)
T ss_dssp HHHH
T ss_pred HHhH
Confidence 4444
No 17
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=99.95 E-value=2.7e-26 Score=261.83 Aligned_cols=345 Identities=14% Similarity=0.146 Sum_probs=199.2
Q ss_pred ccccEEEECCCHHHHHHHHHHHh-hchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCC
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQ-LCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSD 184 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~-~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~ 184 (644)
..+|||||||||+||++|+.|++ . |++|+||||.+.++.. ..+..+.++++ +++..++.............
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~------G~~V~viEr~~~~~~~-g~a~~l~~~t~-e~l~~lGl~~~~~~~~~~~~ 102 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFP------DIRTCIVEQKEGPMEL-GQADGIACRTM-EMFEAFEFADSILKEACWIN 102 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCT------TSCEEEECSSSSCCSS-CSCCEECHHHH-HHHHHTTCHHHHHHHSEEEC
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhC------CCCEEEEeCCCCCCCC-CceeeeCHHHH-HHHHHcCcHHHHHHhccccc
Confidence 46899999999999999999999 9 9999999999876532 34566777765 33333322110000000011
Q ss_pred cEEEecc----CCcc----ccCC---CCCCCCcEEEcHHHHHHHHHHHHHhcCC--EEecCceEEEEEEcCC--CcEEEE
Q 006466 185 KFWFLTK----DRAF----SLPS---PFSNRGNYVISLSQLVRWLGGKAEELGV--EIYPGFAASEILYDAD--NKVIGI 249 (644)
Q Consensus 185 ~~~~~~~----~~~~----~~~~---~~~~~~~~~v~r~~l~~~L~~~a~~~Gv--~i~~g~~v~~v~~~~~--g~v~gV 249 (644)
.+.++.. ...+ .++. .......+.+++..+.+.|.+.+++.|+ +|+++++|+++..+++ +..+.|
T Consensus 103 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v 182 (639)
T 2dkh_A 103 DVTFWKPDPGQPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTV 182 (639)
T ss_dssp EEEEEEECTTSTTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEE
T ss_pred ceEEECCCCCCCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEE
Confidence 1112211 0111 0111 1112235678999999999999999987 9999999999998763 222345
Q ss_pred EeCcCccccCCCcccccccceEEEcCEEEEecCCCCcchHHHHHHcCCCcccccCcccceeEEEEEEeecCCCCCCCc-E
Q 006466 250 GTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGE-I 328 (644)
Q Consensus 250 ~~~d~g~~~~G~~~~~~~~g~~i~a~~vV~A~G~~s~l~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~-~ 328 (644)
++.+.+...+|+ ..+++||+||+|||.+|.+|+++ ++..+ ..... ...++..+............ .
T Consensus 183 ~~~~~~~~~~G~-------~~~i~a~~vVgADG~~S~vR~~l----g~~~~-g~~~~-~~~~~~~~~~~~~~p~~~~~~~ 249 (639)
T 2dkh_A 183 TLERCDAAHAGQ-------IETVQARYVVGCDGARSNVRRAI----GRQLV-GDSAN-QAWGVMDVLAVTDFPDVRYKVA 249 (639)
T ss_dssp EEEECSGGGTTC-------EEEEEEEEEEECCCTTCHHHHHT----TCCCE-ECSCS-CCEEEEEEEEEECCTTTTSEEE
T ss_pred EEEeccccCCCC-------eEEEEeCEEEECCCcchHHHHHh----CCCCC-CCCcc-ceEEEEEEEEccCCCccceeEE
Confidence 554210001232 25799999999999999988865 55431 11111 11233222111110001111 1
Q ss_pred EEEeccCCCCCCcceEEEEEeCCC-eEEEEEEEcc--CC---CCCCCCcHHHHHHhhc--CCcchhcccCCceeeeccee
Q 006466 329 LHTLGWPLDQKTYGGSFLYHMNDR-QIALGLVVAL--NY---HNPFLNPYEEFQKFKH--HPAIKPLLEGGTVVQYGART 400 (644)
Q Consensus 329 ~h~~g~~~~~~~~g~~~l~~~~~~-~~~ig~~~~~--d~---~~~~~~~~~~~~~~~~--~p~i~~~l~~~~~i~~~~~~ 400 (644)
++. + .|..|++|.+++ .+.+.+.... +. .....++.+..+.++. .|.... + +.+.+-. .
T Consensus 250 ~~~------~--~g~~~~~P~~~~~~~r~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~-~---~~~~~~~-~ 316 (639)
T 2dkh_A 250 IQS------E--QGNVLIIPREGGHLVRFYVEMDKLDADERVASRNITVEQLIATAQRVLHPYKLE-V---KNVPWWS-V 316 (639)
T ss_dssp EEE------T--TEEEEEEECTTSSCEEEEEECC-----------CCCHHHHHHHHHHHHTTSCEE-E---EEEEEEE-E
T ss_pred EEc------C--CceEEEEEcCCCcEEEEEEECCCcCcccccccCCCCHHHHHHHHHHHhCcccCc-c---eeeeEEE-e
Confidence 121 1 245678898877 5666554322 11 1112333333333321 111000 0 1111110 0
Q ss_pred eecCCcccCCccc------------CCCeEEEccCCcccCCCCCcchHHHHHHHHHHHHHHhccccC---CchHHHHHHH
Q 006466 401 LNEGGLQSIPYPV------------FPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE---DSNMEIYWDT 465 (644)
Q Consensus 401 i~~gg~~~~~~~~------------~~~v~LiGDAA~~~~P~~g~G~~~A~~sa~~lA~~l~~~l~~---~~~l~~Ye~~ 465 (644)
. ..+....++|. .+||+|+|||||.++|+.|||+|+||+||..||+.|+..+.. ...|+.|+++
T Consensus 317 ~-~~~~~~a~~~~~~~~~~~~~~~~~gRV~L~GDAAH~~~P~~GqG~n~ai~DA~nLawkLa~vl~g~a~~~lL~~Ye~e 395 (639)
T 2dkh_A 317 Y-EIGQRICAKYDDVVDAVATPDSPLPRVFIAGDACHTHSPKAGQGMNFSMQDSFNLGWKLAAVLRKQCAPELLHTYSSE 395 (639)
T ss_dssp E-CCCCEECSCSBSCCCSSCCTTSCCCCEEECGGGTEECCGGGCCTTHHHHHHHHHHHHHHHHHHTTSBCGGGGHHHHHH
T ss_pred c-ccccchhhhhhccccccccccCccCcEEEEecccccCCCcccccchhhHHHHHHHHHHHHHHHcCCCcHHHHHHHHHH
Confidence 1 11111223444 789999999999999999999999999999999999887654 4689999999
Q ss_pred HHHhHHHHHHHHHhcchhhhh
Q 006466 466 LQKSWVWQELQRARNYRPAFE 486 (644)
Q Consensus 466 ~~~~~~~~~l~~~r~~~~~~~ 486 (644)
++.. ..+.+..++.+..+|.
T Consensus 396 R~~~-a~~~~~~s~~~~~~~~ 415 (639)
T 2dkh_A 396 RQVV-AQQLIDFDREWAKMFS 415 (639)
T ss_dssp HHHH-HHHHHHHHHHSCC---
T ss_pred HHHH-HHHHHHHHHHHHHHhc
Confidence 9974 6666777777666664
No 18
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=99.95 E-value=5.7e-27 Score=252.62 Aligned_cols=333 Identities=14% Similarity=0.100 Sum_probs=179.9
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCccc-ccCccChHHHH---HHh--hhhhhcCCCeeeec
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHII-SGNVFEPRALN---ELL--PQWKQEEAPIRVPV 181 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~-~g~~i~~~~l~---~l~--~~~~~~~~~~~~~~ 181 (644)
.+|+||||||+||++|+.|++. |++|+||||.+.+..... .+..+.+.++. ++. ..+.........
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~------G~~v~v~Er~~~~~~~~~G~~i~l~~~~~~~L~~lg~~~~~~~~~~~~~~-- 73 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKH------GIKVTIYERNSAASSILPGYGIHINSFGKQALQECLPAENWLAFEEASRY-- 73 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCSSCSSCCCCEEEECHHHHHHHHHHSCHHHHHHHHHHCEE--
T ss_pred CEEEEECcCHHHHHHHHHHHhC------CCCEEEEecCCCCCcCCCceEEeeCHHHHHHHHHcCChHHHHHhhhhhcc--
Confidence 4699999999999999999999 999999999887644221 12335565542 221 111110000000
Q ss_pred cCCcEEEeccCCcc--------ccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCc
Q 006466 182 SSDKFWFLTKDRAF--------SLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTND 253 (644)
Q Consensus 182 ~~~~~~~~~~~~~~--------~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d 253 (644)
......+....... ...........+.++|..|.+.|.+.+ +.+|++++++++++.++++.| .|++.|
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~---~~~v~~~~~v~~~~~~~~~~v-~v~~~d 149 (412)
T 4hb9_A 74 IGGQSRFYNERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNKGL---ANTIQWNKTFVRYEHIENGGI-KIFFAD 149 (412)
T ss_dssp ECCCCEEECTTSCEEEC--------------CEEEEEHHHHHHHHHTTC---TTTEECSCCEEEEEECTTSCE-EEEETT
T ss_pred cCcceeEecCCcceecccCCccccccccccccceEeeHHHHHHHHHhhc---cceEEEEEEEEeeeEcCCCeE-EEEECC
Confidence 00001111111000 001111122356789999999987644 456899999999998776755 577766
Q ss_pred CccccCCCcccccccceEEEcCEEEEecCCCCcchHHHHHHcCCCcccccCcccceeE-EEEEEeecC-------CCCCC
Q 006466 254 MGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALG-IKEVWEIDE-------GKHNP 325 (644)
Q Consensus 254 ~g~~~~G~~~~~~~~g~~i~a~~vV~A~G~~s~l~~~l~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~-------~~~~~ 325 (644)
|.+++||+||+|||.+|.+|+++. ... .+..++.. +........ .....
T Consensus 150 ---------------G~~~~adlvVgADG~~S~vR~~l~----~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (412)
T 4hb9_A 150 ---------------GSHENVDVLVGADGSNSKVRKQYL----PFI----ERFDVGVSMIIGRARLTPALTALLPQNFRD 206 (412)
T ss_dssp ---------------SCEEEESEEEECCCTTCHHHHHHS----TTC----CCEEEEEEEEEEEEECCHHHHHHSCGGGTS
T ss_pred ---------------CCEEEeeEEEECCCCCcchHHHhC----CCc----cccccceeEEEEEEecchhhhcchhhhhcc
Confidence 788999999999999999999872 221 11111111 111111110 00111
Q ss_pred CcEEEEeccCCCCCC-cceEEEEEe--------C--CCeEEEEEEEcc-CCCCC--CCCcHHHHHH----hh-cCCcchh
Q 006466 326 GEILHTLGWPLDQKT-YGGSFLYHM--------N--DRQIALGLVVAL-NYHNP--FLNPYEEFQK----FK-HHPAIKP 386 (644)
Q Consensus 326 g~~~h~~g~~~~~~~-~g~~~l~~~--------~--~~~~~ig~~~~~-d~~~~--~~~~~~~~~~----~~-~~p~i~~ 386 (644)
+..... .+..+.. +-..|..+. . ++.+.+...... ..... ...+....+. +. .+|.+..
T Consensus 207 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 284 (412)
T 4hb9_A 207 GTPNSI--VPKSPDWLFISMWRAPVNIHVEASLAEIDNFIVWVYVAATDSLPDNITDFSAEALCDLVQSRMISWDPSLHT 284 (412)
T ss_dssp SCCEEE--CCSSSEEEEEEEEEEESCTTSCGGGCCEEEEEEEEEEEEGGGSCTTGGGCCHHHHHHHHHHHTTTSCHHHHH
T ss_pred CCcceE--eecCCCcceeeeeecCCceeEEEeccCCCceEEEEEecccccccccccccchHHHHHHHHHHhccCChHHHH
Confidence 111110 0111100 000000010 0 111111111111 11111 1122222222 22 2456666
Q ss_pred cccCCceeeecceeeecCCcccCCcccCCCeEEEccCCcccCCCCCcchHHHHHHHHHHHHHHhccccC----CchHHHH
Q 006466 387 LLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE----DSNMEIY 462 (644)
Q Consensus 387 ~l~~~~~i~~~~~~i~~gg~~~~~~~~~~~v~LiGDAA~~~~P~~g~G~~~A~~sa~~lA~~l~~~l~~----~~~l~~Y 462 (644)
+++........ .+.......+++|..+||+|||||||.++|+.|||+|+||+||..||+.|...+.. ..+|+.|
T Consensus 285 li~~~~~~~~~--~~~~~~~~~~~~~~~grv~LiGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~~~~~~~~~~~aL~~Y 362 (412)
T 4hb9_A 285 LVQQSDMENIS--PLHLRSMPHLLPWKSSTVTLLGDAIHNMTPMTGSGANTALRDALLLTQKLASVASGHEELVKAISDY 362 (412)
T ss_dssp HHHTSCTTCCE--EEEEEECCCCCCCCCCSEEECTHHHHCSSCCSSSHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHH
T ss_pred HHHhcccceec--cchhccccccccccccCEEEEEcccccCCCchhhHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHH
Confidence 65533211110 01111122456788999999999999999999999999999999999999987654 3579999
Q ss_pred HHHHHHhHHHHHHHHHhc
Q 006466 463 WDTLQKSWVWQELQRARN 480 (644)
Q Consensus 463 e~~~~~~~~~~~l~~~r~ 480 (644)
|++++.. ..+.+..++.
T Consensus 363 e~~R~~~-~~~~~~~s~~ 379 (412)
T 4hb9_A 363 EQQMRAY-ANEIVGISLR 379 (412)
T ss_dssp HHHHHHH-HHHHHHHHHH
T ss_pred HHHHHHH-HHHHHHHHHH
Confidence 9999875 5555555544
No 19
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.95 E-value=1.3e-26 Score=260.99 Aligned_cols=325 Identities=18% Similarity=0.201 Sum_probs=201.9
Q ss_pred cccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhh------cCCCee
Q 006466 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQ------EEAPIR 178 (644)
Q Consensus 105 ~~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~------~~~~~~ 178 (644)
++.+||||||||+||+++|+.|++. |++|+|||+.+..+. ..|..+.+... +++..++. ......
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar~------G~~V~LiEr~~~~~~--~~G~~l~p~~~-~~l~~lGl~~~l~~~~~~~~ 91 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHKL------GHDVTIYERSAFPRY--RVGESLLPGTM-SILNRLGLQEKIDAQNYVKK 91 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCSSCC--CCCCBCCHHHH-HHHHHTTCHHHHHHHCCEEE
T ss_pred CCCCCEEEECcCHHHHHHHHHHHcC------CCCEEEEcCCCCCCC--ceeeeECHHHH-HHHHHcCCcHHHHhcCCccc
Confidence 3469999999999999999999999 999999999875443 23556666544 22222221 111100
Q ss_pred eeccCCcEEEeccCC--ccccCC----CCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeC
Q 006466 179 VPVSSDKFWFLTKDR--AFSLPS----PFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTN 252 (644)
Q Consensus 179 ~~~~~~~~~~~~~~~--~~~~~~----~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~ 252 (644)
. ...+.+..... .+.+.. .......+.+++..|.+.|.+.+++.|++++++++|+++..++ +.+++|++.
T Consensus 92 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~-g~~~~V~~~ 167 (591)
T 3i3l_A 92 P---SATFLWGQDQAPWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLSD-PDRVVLTVR 167 (591)
T ss_dssp C---EEEEECSSSCCCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECCS-TTCEEEEEE
T ss_pred C---CcEEEecCCCccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcC-CCEEEEEEe
Confidence 0 00000100000 011111 1122346889999999999999999999999999999998764 445678775
Q ss_pred cCccccCCCcccccccceEEEcCEEEEecCCCCcchHHHHHHcCCCcccccCcccceeEEEEEEeecC--CCCCCCcEEE
Q 006466 253 DMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDE--GKHNPGEILH 330 (644)
Q Consensus 253 d~g~~~~G~~~~~~~~g~~i~a~~vV~A~G~~s~l~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~g~~~h 330 (644)
+ +|+ ..+++||+||+|||.+|.+++++ ++.. ........++...+.... .....+....
T Consensus 168 ~-----~G~-------~~~i~AdlVV~AdG~~S~lr~~l----g~~~---~~~~~~~~av~~~~~~~~~~~~~~~~~~~~ 228 (591)
T 3i3l_A 168 R-----GGE-------SVTVESDFVIDAGGSGGPISRKL----GVRQ---YDEFYRNFAVWSYFKLKDPFEGDLKGTTYS 228 (591)
T ss_dssp E-----TTE-------EEEEEESEEEECCGGGCHHHHHH----TCEE---EEEEEEEEEEEEEEECCCSCCSTTTTCEEE
T ss_pred c-----CCc-------eEEEEcCEEEECCCCcchhHHHc----CCCC---CCccccceEEEEEEecCccccCCCCCceEE
Confidence 2 111 15799999999999999888765 5442 111111222222222211 1111222222
Q ss_pred EeccCCCCCCcceEEEEEeCCCeEEEEEEEccCCCCC--CCCcHHHHHHh-hcCCcchhcccCCceeeecceeeecCCcc
Q 006466 331 TLGWPLDQKTYGGSFLYHMNDRQIALGLVVALNYHNP--FLNPYEEFQKF-KHHPAIKPLLEGGTVVQYGARTLNEGGLQ 407 (644)
Q Consensus 331 ~~g~~~~~~~~g~~~l~~~~~~~~~ig~~~~~d~~~~--~~~~~~~~~~~-~~~p~i~~~l~~~~~i~~~~~~i~~gg~~ 407 (644)
.+. ..|..|++|..++.+++++....+.... ...+.+.++.+ ...|.+.+.+.+...+.. .+.++....
T Consensus 229 ~~~------~~G~~w~iPl~~~~~sv~~~~~~~~~~~l~~~~~~~~~~~l~~~~p~l~~~l~~~~~~~~-~~~~~~~~~- 300 (591)
T 3i3l_A 229 ITF------EDGWVWMIPIKDDLYSVGLVVDRSKSAEVREQGADAFYSSTLAKCAKAMDILGGAEQVDE-VRIVQDWSY- 300 (591)
T ss_dssp EEE------TTEEEEEEECSSSEEEEEEEEEGGGHHHHHHHCHHHHHHHHHTTCHHHHHHHTTCEECSC-CEEEEEEEE-
T ss_pred EEc------CCcEEEEEECCCCeEEEEEEcCHHHHhhhccCCHHHHHHHHHHhCHHHHHHHhcCccccC-ceEeccccc-
Confidence 221 1255789999998889988765432110 01223333333 345666666665443321 111211111
Q ss_pred cCCcccCCCeEEEccCCcccCCCCCcchHHHHHHHHHHHHHHhccccCC----chHHHHHHHHHHh
Q 006466 408 SIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHED----SNMEIYWDTLQKS 469 (644)
Q Consensus 408 ~~~~~~~~~v~LiGDAA~~~~P~~g~G~~~A~~sa~~lA~~l~~~l~~~----~~l~~Ye~~~~~~ 469 (644)
..+++..+|+++||||||+++|+.|+|+++|++||..||++|.+.+... ..++.|++.++..
T Consensus 301 ~~~~~~~~rvvLIGDAAh~~~Pl~GqGinlAl~dA~~LA~~L~~~l~~~~~~~~al~~Y~~~~~~~ 366 (591)
T 3i3l_A 301 DTEVFSADRFFLCGDAACFTDPLFSQGVHLASQSAVSAAAAIDRITRHGDEKDAVHAWYNRTYREA 366 (591)
T ss_dssp EESCSEETTEEECGGGTCBCCGGGCCHHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHH
T ss_pred chhhcccCCEEEEccccccCCCcccccHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHH
Confidence 2357788999999999999999999999999999999999998876542 3688999888865
No 20
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.94 E-value=1.1e-25 Score=242.44 Aligned_cols=324 Identities=14% Similarity=0.121 Sum_probs=188.1
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCc
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDK 185 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~ 185 (644)
+.+||+||||||+||++|+.|++. |++|+||||.+........|..+.+..+ +++..++... .........
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~------G~~v~v~E~~~~~~~~~~~g~~l~~~~~-~~l~~~g~~~--~~~~~~~~~ 74 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDA------GVDVDVYERSPQPLSGFGTGIVVQPELV-HYLLEQGVEL--DSISVPSSS 74 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSCCCCSCEEECCHHHH-HHHHHTTCCG--GGTCBCCCE
T ss_pred CCCcEEEECCCHHHHHHHHHHHhC------CCCEEEEecCCCCCCccccccccChhHH-HHHHHcCCcc--ccccccccc
Confidence 358999999999999999999999 9999999998764222223445666654 4444443322 111111222
Q ss_pred EEEecc-CCcc--ccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCc
Q 006466 186 FWFLTK-DRAF--SLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSK 262 (644)
Q Consensus 186 ~~~~~~-~~~~--~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~ 262 (644)
+.+... .... ..+. ....+.+..+.+.|.+.+ .|++|+++++|+++..++++ + .|++.+
T Consensus 75 ~~~~~~~~g~~~~~~~~-----~~~~~~~~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~-v-~v~~~~--------- 136 (397)
T 2vou_A 75 MEYVDALTGERVGSVPA-----DWRFTSYDSIYGGLYELF--GPERYHTSKCLVGLSQDSET-V-QMRFSD--------- 136 (397)
T ss_dssp EEEEETTTCCEEEEEEC-----CCCEEEHHHHHHHHHHHH--CSTTEETTCCEEEEEECSSC-E-EEEETT---------
T ss_pred eEEEecCCCCccccccC-----cccccCHHHHHHHHHHhC--CCcEEEcCCEEEEEEecCCE-E-EEEECC---------
Confidence 333322 1111 0110 123477889999998876 48999999999999987754 4 477665
Q ss_pred ccccccceEEEcCEEEEecCCCCcchHHHHHHcCCCcccccCcccce-eEEEEEEeecCCCCCCC------cEEEEeccC
Q 006466 263 KENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYA-LGIKEVWEIDEGKHNPG------EILHTLGWP 335 (644)
Q Consensus 263 ~~~~~~g~~i~a~~vV~A~G~~s~l~~~l~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~g------~~~h~~g~~ 335 (644)
|.+++||+||+|||.+|.+|+.+. .+ . +...+ ..+... ++.....+. ...+.+.
T Consensus 137 ------g~~~~ad~vV~AdG~~S~vr~~~~-~~--~------~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-- 197 (397)
T 2vou_A 137 ------GTKAEANWVIGADGGASVVRKRLL-GI--E------PTYAGYVTWRGV--LQPGEVADDVWNYFNDKFTYGL-- 197 (397)
T ss_dssp ------SCEEEESEEEECCCTTCHHHHHHH-CC--C------CEEEEEEEEEEE--ECTTSSCHHHHHHHTTEEEEEE--
T ss_pred ------CCEEECCEEEECCCcchhHHHHhc-cC--C------CCccceEEEEEE--eeccccChhhhhhhcCceeEEe--
Confidence 668999999999999999999874 22 1 11111 111111 221111110 0111110
Q ss_pred CCCCCcceEEEEEeCCC------eEEEEEEEccCC--------CCC----C-------CCcHHHHH----Hhh-c-CCcc
Q 006466 336 LDQKTYGGSFLYHMNDR------QIALGLVVALNY--------HNP----F-------LNPYEEFQ----KFK-H-HPAI 384 (644)
Q Consensus 336 ~~~~~~g~~~l~~~~~~------~~~ig~~~~~d~--------~~~----~-------~~~~~~~~----~~~-~-~p~i 384 (644)
.++ +...+|+..++ .+.+.+...... .+. + ....+.++ .+. . .| +
T Consensus 198 -~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 273 (397)
T 2vou_A 198 -LDD--GHLIAYPIPGRENAESPRLNFQWYWNVAEGPDLDELMTDVRGIRLPTSVHNNSLNPHNLRQFHSKGESLFKP-F 273 (397)
T ss_dssp -ETT--EEEEEEEECCSSTTSCCEEEEEEEEECCTTHHHHHHTBCTTSCBCSSEECGGGCCHHHHHHHHHHHTTSCHH-H
T ss_pred -cCC--CEEEEEECCCCCCccceeEEEEEEecCCCccchhhhccCCCCcccccccCcccCCHHHHHHHHHHHHhhChH-H
Confidence 011 11334555432 333333322110 000 0 00112222 221 1 22 4
Q ss_pred hhcccCC-ceeeecceeeecCCcccCCcccCCCeEEEccCCcccCCCCCcchHHHHHHHHHHHHHHhccccCCchHHHHH
Q 006466 385 KPLLEGG-TVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHEDSNMEIYW 463 (644)
Q Consensus 385 ~~~l~~~-~~i~~~~~~i~~gg~~~~~~~~~~~v~LiGDAA~~~~P~~g~G~~~A~~sa~~lA~~l~~~l~~~~~l~~Ye 463 (644)
.++++.. ....+ .+.. . ..++|..+|++|||||||.++|+.|||+++||+||..||+.|........+|+.|+
T Consensus 274 ~~~~~~~~~~~~~---~~~~--~-~~~~~~~grv~LiGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~~~~~~~~L~~Ye 347 (397)
T 2vou_A 274 RDLVLNASSPFVT---VVAD--A-TVDRMVHGRVLLIGDAAVTPRPHAAAGGAKASDDARTLAEVFTKNHDLRGSLQSWE 347 (397)
T ss_dssp HHHHHHCSSCEEE---EEEE--B-CCSCSEETTEEECGGGTSBCCGGGSCHHHHHHHHHHHHHHHHHHCSCHHHHHHHHH
T ss_pred HHHHhccCCccee---eeee--e-cCCceecCcEEEEeccccccCCcchhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHH
Confidence 4444321 11111 1111 1 34678899999999999999999999999999999999999975322246799999
Q ss_pred HHHHHhHHHHHHHHHhcchhhhh
Q 006466 464 DTLQKSWVWQELQRARNYRPAFE 486 (644)
Q Consensus 464 ~~~~~~~~~~~l~~~r~~~~~~~ 486 (644)
++++.. ..+.+..++.+...+.
T Consensus 348 ~~R~~~-~~~~~~~s~~~~~~~~ 369 (397)
T 2vou_A 348 TRQLQQ-GHAYLNKVKKMASRLQ 369 (397)
T ss_dssp HHHHHH-HHHHHHHHHHHHHHHT
T ss_pred HHHHHH-HHHHHHHHHHHHHHHh
Confidence 988864 6666666666555543
No 21
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.94 E-value=1.1e-25 Score=242.52 Aligned_cols=319 Identities=15% Similarity=0.125 Sum_probs=183.8
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCcc--Ch----HHHHHH--hhhhhhcCCCe
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVF--EP----RALNEL--LPQWKQEEAPI 177 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i--~~----~~l~~l--~~~~~~~~~~~ 177 (644)
+.+||+||||||+||++|+.|++. |++|+||||.+.++... .|+.+ .+ +.+.++ .+.+.....+.
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~------G~~v~v~E~~~~~~~~~-~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~ 97 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQN------GIDVSVYERDNDREARI-FGGTLDLHKGSGQEAMKKAGLLQTYYDLALPM 97 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTT------TCEEEEEECSSSTTCCC-CSCCEECCTTTHHHHHHHTTCHHHHHHHCBCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC------CCCEEEEeCCCCccccc-cCCeeeeCCccHHHHHHhcChHHHHHHhhccc
Confidence 468999999999999999999999 99999999988654322 23222 22 122211 12221111111
Q ss_pred eeeccCCcEEEeccCCcc--cc--CCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCc
Q 006466 178 RVPVSSDKFWFLTKDRAF--SL--PSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTND 253 (644)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d 253 (644)
. . .+....... .. +.. .......++|..|.+.|.+.+.+ ++|+++++|+++..++++ + .|++.+
T Consensus 98 ~------~-~~~~~~g~~~~~~~~~~~-~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~-v-~v~~~~ 165 (398)
T 2xdo_A 98 G------V-NIADEKGNILSTKNVKPE-NRFDNPEINRNDLRAILLNSLEN--DTVIWDRKLVMLEPGKKK-W-TLTFEN 165 (398)
T ss_dssp C------E-EEECSSSEEEEECCCGGG-TTSSCCEECHHHHHHHHHHTSCT--TSEEESCCEEEEEECSSS-E-EEEETT
T ss_pred c------e-EEECCCCCchhhcccccc-CCCCCceECHHHHHHHHHhhcCC--CEEEECCEEEEEEECCCE-E-EEEECC
Confidence 1 0 112111111 11 110 11234568999999999987754 689999999999987744 4 477655
Q ss_pred CccccCCCcccccccceEEEcCEEEEecCCCCcchHHHHHHcCCCcccccCcccceeEEEEEEeecCCC-----C---CC
Q 006466 254 MGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGK-----H---NP 325 (644)
Q Consensus 254 ~g~~~~G~~~~~~~~g~~i~a~~vV~A~G~~s~l~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-----~---~~ 325 (644)
|.+++||+||+|||.+|.+|+.+ +.. .+...+...... .++... . ..
T Consensus 166 ---------------g~~~~ad~vV~AdG~~S~vR~~l----~~~-----~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~ 220 (398)
T 2xdo_A 166 ---------------KPSETADLVILANGGMSKVRKFV----TDT-----EVEETGTFNIQA-DIHQPEINCPGFFQLCN 220 (398)
T ss_dssp ---------------SCCEEESEEEECSCTTCSCCTTT----CCC-----CCEEEEEEEEEE-EESSHHHHSHHHHHHHT
T ss_pred ---------------CcEEecCEEEECCCcchhHHhhc----cCC-----CceEcceEEEEE-EeCchhccCchhHhhcC
Confidence 56799999999999999999865 211 112222211111 111100 0 01
Q ss_pred CcEEEEeccCCCCCCcceEEEEEeCCCeEEEEEEEccC--CCC----CCCCcHHHHHHh----hc-CCcchhcccCC-ce
Q 006466 326 GEILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVALN--YHN----PFLNPYEEFQKF----KH-HPAIKPLLEGG-TV 393 (644)
Q Consensus 326 g~~~h~~g~~~~~~~~g~~~l~~~~~~~~~ig~~~~~d--~~~----~~~~~~~~~~~~----~~-~p~i~~~l~~~-~~ 393 (644)
....+.++ ++ ...+.++..++.+.+.+..... +.. ++.++.+..+.+ .. +|.+.++++.. ..
T Consensus 221 ~g~~~~~~----~~--~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 294 (398)
T 2xdo_A 221 GNRLMASH----QG--NLLFANPNNNGALHFGISFKTPDEWKNQTQVDFQNRNSVVDFLLKEFSDWDERYKELIHTTLSF 294 (398)
T ss_dssp TSEEEEEE----TT--EEEEEEEEETTEEEEEEEEECCTTC---CCSCTTCHHHHHHHHHHHTTTSCHHHHHHHHHCSCC
T ss_pred CceEEEec----CC--CeEEEEeCCCCcEEEEEEEecCcccccccccCcCCHHHHHHHHHHHHcCCChHHHHHHhCcccc
Confidence 11122221 11 2245567777777776654322 111 112333222222 21 23444444321 11
Q ss_pred eeecceeeecCCcccCCcccC-C--CeEEEccCCcccCCCCCcchHHHHHHHHHHHHHHhccccC--CchHHHHHHHHHH
Q 006466 394 VQYGARTLNEGGLQSIPYPVF-P--GGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE--DSNMEIYWDTLQK 468 (644)
Q Consensus 394 i~~~~~~i~~gg~~~~~~~~~-~--~v~LiGDAA~~~~P~~g~G~~~A~~sa~~lA~~l~~~l~~--~~~l~~Ye~~~~~ 468 (644)
..+....+ ...++|.. + |++|||||||.++|+.|||+++||+||..||+.|.+...+ ..+|+.|+++++.
T Consensus 295 ~~~~~~~~-----~~~~~~~~~~~~rv~LiGDAAh~~~P~~GqG~n~ai~Da~~La~~L~~~~~~~~~~~L~~Y~~~r~~ 369 (398)
T 2xdo_A 295 VGLATRIF-----PLEKPWKSKRPLPITMIGDAAHLMPPFAGQGVNSGLVDALILSDNLADGKFNSIEEAVKNYEQQMFI 369 (398)
T ss_dssp EEEEEEEC-----CCCSCCCSCCSSCEEECTHHHHCCCCTTSCSHHHHHHHHHHHHHHHHSCCSSSHHHHHHHHHHHHHH
T ss_pred eeeeeEec-----cCCCCcccCCCccEEEEeehhccCCCccCccHHHHHHHHHHHHHHHHhccCchHHHHHHHHHHHHHH
Confidence 11111111 11235654 5 8999999999999999999999999999999999875322 3579999999986
Q ss_pred hHHHHHHHHHhc
Q 006466 469 SWVWQELQRARN 480 (644)
Q Consensus 469 ~~~~~~l~~~r~ 480 (644)
. ..+.+..++.
T Consensus 370 ~-~~~~~~~s~~ 380 (398)
T 2xdo_A 370 Y-GKEAQEESTQ 380 (398)
T ss_dssp H-HHHHHHHHHH
T ss_pred H-HHHHHHHHHH
Confidence 4 5555554443
No 22
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=99.93 E-value=1.7e-24 Score=242.81 Aligned_cols=331 Identities=16% Similarity=0.138 Sum_probs=188.6
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhh------cCCCeee
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQ------EEAPIRV 179 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~------~~~~~~~ 179 (644)
+++||+||||||+||++|+.|++. |++|+||||.+.++.. ..+..+.++++ +++..++. ...+...
T Consensus 25 ~~~dVlIVGaGpaGl~~A~~La~~------G~~V~vlEr~~~~~~~-~~~~~l~~~~~-~~l~~lGl~~~~~~~~~~~~~ 96 (549)
T 2r0c_A 25 IETDVLILGGGPVGMALALDLAHR------QVGHLVVEQTDGTITH-PRVGTIGPRSM-ELFRRWGVAKQIRTAGWPGDH 96 (549)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSCSCCSS-CCCCEECHHHH-HHHHHTTCHHHHHTSSCCTTS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC------CCCEEEEeCCCCCCCC-CceeeeCHHHH-HHHHHcCChHHHHhhcCCccc
Confidence 468999999999999999999999 9999999999876542 34667777765 33333321 1111100
Q ss_pred eccCCcEEEecc--CCc---cccCCC-------CCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEE
Q 006466 180 PVSSDKFWFLTK--DRA---FSLPSP-------FSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVI 247 (644)
Q Consensus 180 ~~~~~~~~~~~~--~~~---~~~~~~-------~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~ 247 (644)
. ....+... ... +.++.. ......+.+++..+.+.|.+.+++. |+++++|++++.++++ |
T Consensus 97 ~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~---v~~~~~v~~~~~~~~~-v- 168 (549)
T 2r0c_A 97 P---LDAAWVTRVGGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER---LRTRSRLDSFEQRDDH-V- 168 (549)
T ss_dssp B---CCEEEESSBTSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG---EECSEEEEEEEECSSC-E-
T ss_pred c---cceEEeccCCCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHHh---cccCcEEEEEEEeCCE-E-
Confidence 0 00111110 000 111110 1122357899999999999999887 9999999999988755 4
Q ss_pred EEEeCcCccccCCCcccccccceEEEcCEEEEecCCCCcchHHHHHHcCCCcccccCcccceeEEEEEEeecCC----CC
Q 006466 248 GIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEG----KH 323 (644)
Q Consensus 248 gV~~~d~g~~~~G~~~~~~~~g~~i~a~~vV~A~G~~s~l~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~----~~ 323 (644)
.|++.+ ..+|+ ..+++||+||+|||.+|.+|+++ ++..+ ....... .+...+..+.. ..
T Consensus 169 ~v~~~~---~~~G~-------~~~i~a~~vVgADG~~S~vR~~l----g~~~~-g~~~~~~--~~~~~~~~~~~~~~~~~ 231 (549)
T 2r0c_A 169 RATITD---LRTGA-------TRAVHARYLVACDGASSPTRKAL----GIDAP-PRHRTQV--FRNILFRAPELRSLLGE 231 (549)
T ss_dssp EEEEEE---TTTCC-------EEEEEEEEEEECCCTTCHHHHHH----TCCCC-BSSCCEE--EEEEEEECTTHHHHHGG
T ss_pred EEEEEE---CCCCC-------EEEEEeCEEEECCCCCcHHHHHc----CCCCC-CCcccce--EEEEEEECCchHHhcCC
Confidence 355433 01232 25799999999999999998876 54421 1111111 12222232210 00
Q ss_pred CCCcEEEEeccCCCCCCcceEEEEEeCCC-eEEEEEEEccCCCCCCCCcHHHHHHhhcCCcchhcccCCceeeecceeee
Q 006466 324 NPGEILHTLGWPLDQKTYGGSFLYHMNDR-QIALGLVVALNYHNPFLNPYEEFQKFKHHPAIKPLLEGGTVVQYGARTLN 402 (644)
Q Consensus 324 ~~g~~~h~~g~~~~~~~~g~~~l~~~~~~-~~~ig~~~~~d~~~~~~~~~~~~~~~~~~p~i~~~l~~~~~i~~~~~~i~ 402 (644)
.+. ..+.+..+ .+ +..++++.+++ ...+.+ ..+.. . .++.+..+.++.. +..-+. .+.+......+.
T Consensus 232 ~~~-~~~~~~~p--~~--~~~~~~p~~~~~~~~~~~--~~~~~-~-~~~~~~~~~l~~~--~~~~~~-~~~~~~~~~~~~ 299 (549)
T 2r0c_A 232 RAA-LFFFLMLS--SS--LRFPLRALDGRGLYRLTV--GVDDA-S-KSTMDSFELVRRA--VAFDTE-IEVLSDSEWHLT 299 (549)
T ss_dssp GCC-SEEEEEEE--TT--EEEEEEESSSSSEEEEEE--ECSTT-C-CSCCCHHHHHHHH--BCSCCC-CEEEEEEEEEEC
T ss_pred CCc-eEEEEECC--CC--cEEEEEEECCCcEEEEEe--cCCCC-C-CCHHHHHHHHHHH--hCCCCc-eeEEEEecchhH
Confidence 111 22222111 10 23567777553 333332 21111 1 2222221222110 000000 112211110111
Q ss_pred cCCcccCCcccCCCeEEEccCCcccCCCCCcchHHHHHHHHHHHHHHhccccC---CchHHHHHHHHHHhHHHHHHHHHh
Q 006466 403 EGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE---DSNMEIYWDTLQKSWVWQELQRAR 479 (644)
Q Consensus 403 ~gg~~~~~~~~~~~v~LiGDAA~~~~P~~g~G~~~A~~sa~~lA~~l~~~l~~---~~~l~~Ye~~~~~~~~~~~l~~~r 479 (644)
....++|..+|++|+|||||.++|+.|||+|+||+||..||+.|...+.. +..|+.|+++++.. ..+.+..++
T Consensus 300 ---~~~a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~l~g~a~~~lL~~Y~~eR~~~-a~~~~~~s~ 375 (549)
T 2r0c_A 300 ---HRVADSFSAGRVFLTGDAAHTLSPSGGFGMNTGIGSAADLGWKLAATLRGWAGPGLLATYEEERRPV-AITSLEEAN 375 (549)
T ss_dssp ---CEECSCSEETTEEECGGGTEECCCGGGHHHHHHHHHHHHHHHHHHHHHHTCSCTTTTHHHHHHHHHH-HHHHHHC--
T ss_pred ---hhhHHhhcCCcEEEEccccccCCCccCCccccccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 12346788899999999999999999999999999999999999887643 46899999999974 666666666
Q ss_pred cchhhh
Q 006466 480 NYRPAF 485 (644)
Q Consensus 480 ~~~~~~ 485 (644)
.....+
T Consensus 376 ~~~~~~ 381 (549)
T 2r0c_A 376 VNLRRT 381 (549)
T ss_dssp ------
T ss_pred HHHHhh
Confidence 555544
No 23
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=99.92 E-value=1.1e-24 Score=233.42 Aligned_cols=318 Identities=15% Similarity=0.010 Sum_probs=180.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhc-CC-CeeeeccCCc
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQE-EA-PIRVPVSSDK 185 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~-~~-~~~~~~~~~~ 185 (644)
.||+||||||+||++|+.|++. .||++|+||||.+.+.. ...+..+.+..+..+.. .... .. ..........
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~----~~G~~V~v~E~~~~~~~-~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 74 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQA----RPLWAIDIVEKNDEQEV-LGWGVVLPGRPGQHPAN-PLSYLDAPERLNPQFLED 74 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH----CTTSEEEEECSSCTTCC-CCSEEEEESCTTTCTTC-GGGGSSCGGGGCCEEECC
T ss_pred CeEEEECCCHHHHHHHHHHHhc----CCCCCEEEEECCCCCCc-ceeEEEeCcHHHHhhcC-cchhhhhhHHHhhccccc
Confidence 3899999999999999999986 45899999999887621 11122222222211110 0000 01 0000111122
Q ss_pred EEEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccc
Q 006466 186 FWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKEN 265 (644)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~ 265 (644)
+.+......+ +.. .....+.++|..|.+.|.+.+++.|++|+++++|+++...
T Consensus 75 ~~~~~~g~~~--~~~-~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~------------------------ 127 (381)
T 3c4a_A 75 FKLVHHNEPS--LMS-TGVLLCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGEL------------------------ 127 (381)
T ss_dssp EEEEESSSEE--ECC-CCSCEEEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGGC------------------------
T ss_pred eEEEeCCeeE--Eec-CCCceeeecHHHHHHHHHHHHHHCCCEEEeCCEeccchhc------------------------
Confidence 2333221111 111 0123467999999999999999999999999988665321
Q ss_pred cccceEEEcCEEEEecCCCCcchHHHHHHcCCCcccccCcccceeEEEEEEeecCCCCCCCcEEEEeccCCCCCCcceEE
Q 006466 266 FQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQKTYGGSF 345 (644)
Q Consensus 266 ~~~g~~i~a~~vV~A~G~~s~l~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~h~~g~~~~~~~~g~~~ 345 (644)
.+++||+||+|||.+|. |+.+.+.++... +. + .+......+... .. .....+... ..|..|
T Consensus 128 ----~~~~ad~vV~AdG~~S~-R~~l~~~~g~~~-----~~-~-~~~~~~~~~~~~--~~-~~~~~~~~~----~~g~~~ 188 (381)
T 3c4a_A 128 ----PLADYDLVVLANGVNHK-TAHFTEALVPQV-----DY-G-RNKYIWYGTSQL--FD-QMNLVFRTH----GKDIFI 188 (381)
T ss_dssp ----CGGGCSEEEECCGGGGG-TCCSSGGGCCCC-----EE-E-EEEEEEEEESSC--CS-SEEEEEEEE----TTEEEE
T ss_pred ----ccccCCEEEECCCCCch-HHhhhhhcCCCc-----cc-C-CccEEEEecCCC--CC-cceeeEeeC----CCcEEE
Confidence 01479999999999999 886654455442 00 0 111111112111 11 111111111 123223
Q ss_pred --EEEeCCCeEEEEEEEccC----CCCCCCCcHHHHH----Hhhc-CCcchhcccCCceeeecceeeecCCcccCCcccC
Q 006466 346 --LYHMNDRQIALGLVVALN----YHNPFLNPYEEFQ----KFKH-HPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVF 414 (644)
Q Consensus 346 --l~~~~~~~~~ig~~~~~d----~~~~~~~~~~~~~----~~~~-~p~i~~~l~~~~~i~~~~~~i~~gg~~~~~~~~~ 414 (644)
+||..++...+.+....+ ..-+..++.+..+ .+.. .+.+ ++++... +.|. .. ....+++|..
T Consensus 189 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~l~~~~~-~~~~--~~---~~~~~~~~~~ 261 (381)
T 3c4a_A 189 AHAYKYSDTMSTFIVECSEETYARARLGEMSEEASAEYVAKVFQAELGGH-GLVSQPG-LGWR--NF---MTLSHDRCHD 261 (381)
T ss_dssp EEEEECSSSCEEEEEEECHHHHHHTTSSSSCHHHHHHHHHHHTHHHHTTC-CCBCCTT-TCSE--EE---EECCCSCSEE
T ss_pred EEEEEecCCeEEEEEECCccccccCCcccCChHHHHHHHHHHhcccCCCc-hhhcCCC-ccee--ee---ccccCCCccc
Confidence 578877665444333211 0011122222222 2221 1221 2222111 1111 11 1123467888
Q ss_pred CCeEEEccCCcccCCCCCcchHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHhHHHHHHHHHhcchhhh
Q 006466 415 PGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHEDSNMEIYWDTLQKSWVWQELQRARNYRPAF 485 (644)
Q Consensus 415 ~~v~LiGDAA~~~~P~~g~G~~~A~~sa~~lA~~l~~~l~~~~~l~~Ye~~~~~~~~~~~l~~~r~~~~~~ 485 (644)
+|++|||||||.++|+.|||+++||+||..||++|........+|+.|+++++.. +.+.+..++.+...|
T Consensus 262 grv~LvGDAAh~~~P~~GqG~~~al~Da~~La~~L~~~~~~~~aL~~Y~~~r~~~-~~~~~~~s~~~~~~~ 331 (381)
T 3c4a_A 262 GKLVLLGDALQSGHFSIGHGTTMAVVVAQLLVKALCTEDGVPAALKRFEERALPL-VQLFRGHADNSRVWF 331 (381)
T ss_dssp TTEEECGGGTCCCCGGGCCHHHHHHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
T ss_pred CCEEEEEccccccCCCccccHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHH-HHHHHHHHHHhhhhh
Confidence 9999999999999999999999999999999999987522246899999999875 777777777766555
No 24
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.92 E-value=1.7e-23 Score=232.88 Aligned_cols=221 Identities=15% Similarity=0.119 Sum_probs=141.9
Q ss_pred CcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccccccceEEEcCEEEEecCCC
Q 006466 205 GNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCR 284 (644)
Q Consensus 205 ~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~~~g~~i~a~~vV~A~G~~ 284 (644)
..+.+++..|.+.|.+.+++.|++++++ +|+++..++++.+++|++.+ |.+++||+||+|||.+
T Consensus 166 ~~~~~~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~---------------g~~~~ad~vV~A~G~~ 229 (511)
T 2weu_A 166 YAYHFDADEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQ---------------HGEISGDLFVDCTGFR 229 (511)
T ss_dssp CEEEECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESS---------------SCEEECSEEEECCGGG
T ss_pred eeEEEcHHHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECC---------------CCEEEcCEEEECCCcc
Confidence 3678999999999999999999999999 99999987767777888765 5679999999999999
Q ss_pred CcchHHHHHHcCCCccc--ccCcccceeEEEEEEeecCCCCCCCcEEEEeccCCCCCCcceEEEEEeCCCeEEEEEEEcc
Q 006466 285 GSLSEKLIKNFKLREKS--HAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVAL 362 (644)
Q Consensus 285 s~l~~~l~~~~~~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~g~~~h~~g~~~~~~~~g~~~l~~~~~~~~~ig~~~~~ 362 (644)
|.+++++ ++..... ...+...++.+. ...+............. . + .|..|++|..+ ...+|++...
T Consensus 230 S~~~~~~---~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~---~--~g~~~~~P~~~-~~~~g~~~~~ 297 (511)
T 2weu_A 230 GLLINQT---LGGRFQSFSDVLPNNRAVALR--VPRENDEDMRPYTTATA-M---S--AGWMWTIPLFK-RDGNGYVYSD 297 (511)
T ss_dssp CCCCCCC---TCCCEEECTTTCCCCEEEEEE--EECSSGGGCCSSEEEEE-E---T--TEEEEEEECSS-EEEEEEEECT
T ss_pred hHHHHHH---hCCCCccccccCcccceEEEE--eccCCCCCCCcceecee-c---C--CCcEEEEECCC-ceEEEEEECC
Confidence 9885533 3443200 011222233322 12211100112222111 1 1 24578889877 6777776542
Q ss_pred CCCCCCCCcHHHHHHhhc----CCcchhcccCCceeeecceeeecCCcccCCcccCCCeEEEccCCcccCCCCCcchHHH
Q 006466 363 NYHNPFLNPYEEFQKFKH----HPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTA 438 (644)
Q Consensus 363 d~~~~~~~~~~~~~~~~~----~p~i~~~l~~~~~i~~~~~~i~~gg~~~~~~~~~~~v~LiGDAA~~~~P~~g~G~~~A 438 (644)
+ ..++.+..+.+.. .|. +.....+.+ ..++ .+++..+|++|||||||+++|+.|+|+++|
T Consensus 298 ~----~~~~~~~~~~l~~~~~~~~~----~~~~~~~~~------~~~~--~~~~~~~rv~liGDAAh~~~P~~g~G~~~a 361 (511)
T 2weu_A 298 E----FISPEEAERELRSTVAPGRD----DLEANHIQM------RIGR--NERTWINNCVAVGLSAAFVEPLESTGIFFI 361 (511)
T ss_dssp T----TSCHHHHHHHHHHHHCTTCT----TSCCEEEEC------CCEE--ESCSEETTEEECGGGTEECCGGGCCHHHHH
T ss_pred C----CCCHHHHHHHHHHHhCcccc----cccceeEEe------eccc--cccccCCCEEEEechhhccCccccccHHHH
Confidence 2 2233333333321 121 111222211 0111 246677999999999999999999999999
Q ss_pred HHHHHHHHHHHhccccCCchHHHHHHHHHHh
Q 006466 439 MKSGMLAAEAGFGVLHEDSNMEIYWDTLQKS 469 (644)
Q Consensus 439 ~~sa~~lA~~l~~~l~~~~~l~~Ye~~~~~~ 469 (644)
++||..||+.|......+.+++.|++.++..
T Consensus 362 ~~da~~La~~l~~~~~~~~~l~~Y~~~~~~~ 392 (511)
T 2weu_A 362 QHAIEQLVKHFPGERWDPVLISAYNERMAHM 392 (511)
T ss_dssp HHHHHHHHHTCCCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCCHHHHHHHHHHHHHH
Confidence 9999999999875222245789999988764
No 25
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.91 E-value=4.8e-23 Score=230.66 Aligned_cols=220 Identities=12% Similarity=0.067 Sum_probs=138.7
Q ss_pred CcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccccccceEEEcCEEEEecCCC
Q 006466 205 GNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCR 284 (644)
Q Consensus 205 ~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~~~g~~i~a~~vV~A~G~~ 284 (644)
..+.+++..|.+.|.+.+++.|++++.+ +|+++..++++.+++|.+.+ |.+++||+||+|+|.+
T Consensus 158 ~~~~i~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~---------------g~~i~ad~vV~A~G~~ 221 (538)
T 2aqj_A 158 HAWHFDAHLVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKE---------------GRTLEADLFIDCSGMR 221 (538)
T ss_dssp CEEEECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETT---------------SCEECCSEEEECCGGG
T ss_pred ccEEEeHHHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECC---------------CcEEEeCEEEECCCCc
Confidence 3688999999999999999999999999 89999887767777788765 5679999999999999
Q ss_pred CcchHHHHHHcCCCcccc--cCcccceeEEEEEEeecCC--CCCCCcEEEEeccCCCCCCcceEEEEEeCCCeEEEEEEE
Q 006466 285 GSLSEKLIKNFKLREKSH--AQHQTYALGIKEVWEIDEG--KHNPGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVV 360 (644)
Q Consensus 285 s~l~~~l~~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~--~~~~g~~~h~~g~~~~~~~~g~~~l~~~~~~~~~ig~~~ 360 (644)
|.+++++ ++...... ..+...++.+.. ..... ...+.... .. . ..|..|++|..+ ...+|++.
T Consensus 222 s~~~~~~---lg~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~----~--~~g~~~~~p~~~-~~~~g~v~ 288 (538)
T 2aqj_A 222 GLLINQA---LKEPFIDMSDYLLCDSAVASAV--PNDDARDGVEPYTSS-IA----M--NSGWTWKIPMLG-RFGSGYVF 288 (538)
T ss_dssp CCCCCCC---TCCCEEECTTTCCCCEEEEEEE--ECCHHHHCCCSSEEE-EE----C--SSEEEEEEEETT-EEEEEEEE
T ss_pred hhhHHHH---hCCCccccccccccceEEEEec--ccCCcccCCCCceee-ee----c--CCceEEEecCCC-ceEEEEEE
Confidence 9885533 34331000 011111222111 11100 01111111 11 1 124578889877 46677765
Q ss_pred ccCCCCCCCCcHHHHHHhhc---CCcchhcccCCceeeecceeeecCCcccCCcccCCCeEEEccCCcccCCCCCcchHH
Q 006466 361 ALNYHNPFLNPYEEFQKFKH---HPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHT 437 (644)
Q Consensus 361 ~~d~~~~~~~~~~~~~~~~~---~p~i~~~l~~~~~i~~~~~~i~~gg~~~~~~~~~~~v~LiGDAA~~~~P~~g~G~~~ 437 (644)
..++ .++.+..+.+.. .+.+ .....+.+ . .+ ..+++..+|++|||||||+++|+.|+|+++
T Consensus 289 ~~~~----~~~~~~~~~l~~~~~~~~~----~~~~~~~~-----~-~~--~~~~~~~grvvliGDAAh~~~P~~gqG~~~ 352 (538)
T 2aqj_A 289 SSHF----TSRDQATADFLKLWGLSDN----QPLNQIKF-----R-VG--RNKRAWVNNCVSIGLSSCFLEPLESTGIYF 352 (538)
T ss_dssp CTTT----SCHHHHHHHHHHHHTCCTT----CCCEEEEC-----C-CE--EESCSEETTEEECGGGTEECCGGGSCHHHH
T ss_pred cCCC----CChHHHHHHHHHHhcCCCC----CCceEEee-----c-cc--cccccccCCEEEEcccccccCcchhccHHH
Confidence 3222 233332232221 1111 11122211 1 11 135677899999999999999999999999
Q ss_pred HHHHHHHHHHHHhccccCCchHHHHHHHHHHh
Q 006466 438 AMKSGMLAAEAGFGVLHEDSNMEIYWDTLQKS 469 (644)
Q Consensus 438 A~~sa~~lA~~l~~~l~~~~~l~~Ye~~~~~~ 469 (644)
||+||..||+.|......+.+|..|++.++..
T Consensus 353 a~~da~~La~~L~~~~~~~~~l~~Y~~~~~~~ 384 (538)
T 2aqj_A 353 IYAALYQLVKHFPDTSFDPRLSDAFNAEIVHM 384 (538)
T ss_dssp HHHHHHHHHHTCCBTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhccCCCHHHHHHHHHHHHHH
Confidence 99999999998764222245789999988764
No 26
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=99.91 E-value=3e-23 Score=231.66 Aligned_cols=227 Identities=14% Similarity=0.062 Sum_probs=136.5
Q ss_pred cEEEcHHHHHHHHHHHHHh-cCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccccccceEEEcCEEEEecCCC
Q 006466 206 NYVISLSQLVRWLGGKAEE-LGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCR 284 (644)
Q Consensus 206 ~~~v~r~~l~~~L~~~a~~-~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~~~g~~i~a~~vV~A~G~~ 284 (644)
.+.+++..|.+.|.+.+++ .||+++++ +|+++..++++.+++|++.+ |.+++||+||+|||.+
T Consensus 169 ~~~~~r~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~---------------g~~i~ad~vV~AdG~~ 232 (526)
T 2pyx_A 169 GYHLNAAKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQ---------------NGEISGQLFIDCTGAK 232 (526)
T ss_dssp EEEECHHHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESS---------------SCEEECSEEEECSGGG
T ss_pred eEEEcHHHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECC---------------CCEEEcCEEEECCCcc
Confidence 5789999999999999999 89999999 69999887767777787765 5569999999999999
Q ss_pred CcchHHHHHHcCCCccccc--CcccceeEEEEEEeecCCCCCCCcEEEEeccCCCCCCcceEEEEEeCCCeEEEEEEEcc
Q 006466 285 GSLSEKLIKNFKLREKSHA--QHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVAL 362 (644)
Q Consensus 285 s~l~~~l~~~~~~~~~~~~--~~~~~~~g~~~~~~~~~~~~~~g~~~h~~g~~~~~~~~g~~~l~~~~~~~~~ig~~~~~ 362 (644)
|.+++.+ ++....... .+...++.+......+.... ......... ..|..|++|..+ ...++++...
T Consensus 233 S~~~~~~---lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~------~~g~~~~~pl~~-~~~~~~v~~~ 301 (526)
T 2pyx_A 233 SLLLGEH---LQVPFLSQKSVLFNDRALAIQVPYSDANSPI-ASCTHSTAQ------PNGWIWDIGLPT-RKGVGYVYSS 301 (526)
T ss_dssp CCCCCCC---TCCCEEECHHHHCCCEEEEEEEECSSTTCCC-CSSEEEEEE------TTEEEEEEECSS-EEEEEEEECT
T ss_pred hHHHHHH---hCCCcccccccccCccEEEEEeeccCCCCCC-CCceeEEec------CCCeEEEeeCCC-ceEEEEEecC
Confidence 9883322 344320000 11112233221111100111 122222110 124467888876 4556665533
Q ss_pred CCCCCCCCcHHHHHHhhcC-CcchhcccCCceeeecceeeecCCcccCCcccCCCeEEEccCCcccCCCCCcchHHHHHH
Q 006466 363 NYHNPFLNPYEEFQKFKHH-PAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKS 441 (644)
Q Consensus 363 d~~~~~~~~~~~~~~~~~~-p~i~~~l~~~~~i~~~~~~i~~gg~~~~~~~~~~~v~LiGDAA~~~~P~~g~G~~~A~~s 441 (644)
++ .+..+..+.+... ......++..+.. .++... ...+++..+|++|||||||+++|+.|+|+++||+|
T Consensus 302 ~~----~~~~~~~~~l~~~l~~~~~~l~~~~~~-----~~~~~~-~~~~~~~~grv~LiGDAAh~~~P~~GqGi~~ai~d 371 (526)
T 2pyx_A 302 SH----TNDIDAQKTLFNYLGVDGAAADKLEPR-----QLAINP-GYRAKCWQNNCIAIGMAAGFIEPLEASALALIEWT 371 (526)
T ss_dssp TT----CCHHHHHHHHHHHHTCCHHHHHHCCCE-----EEECCC-EEESCSEETTEEECGGGTEECCCTTCHHHHHHHHH
T ss_pred CC----CChHHHHHHHHHHHHhcCcccccCCce-----EEeccc-CccccccCCCEEEEEhhhcccCccccccHHHHHHH
Confidence 22 2222222222110 0001112111111 111100 11346778999999999999999999999999999
Q ss_pred HHHHHHHHhcccc-CCchHHHHHHHHHHh
Q 006466 442 GMLAAEAGFGVLH-EDSNMEIYWDTLQKS 469 (644)
Q Consensus 442 a~~lA~~l~~~l~-~~~~l~~Ye~~~~~~ 469 (644)
|..||+.|..... .+..++.|++.++..
T Consensus 372 a~~La~~L~~~~~~~~~~l~~Y~~~~~~~ 400 (526)
T 2pyx_A 372 ASTLAQQLPPNRMVMDTISARVNERYQQH 400 (526)
T ss_dssp HHHHHHTCCSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhcCCcCHHHHHHHHHHHHHH
Confidence 9999998863211 135789999988865
No 27
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.90 E-value=1.9e-22 Score=226.30 Aligned_cols=225 Identities=12% Similarity=0.065 Sum_probs=138.6
Q ss_pred cEEEcHHHHHHHHHHHHHhc-CCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccccccceEEEcCEEEEecCCC
Q 006466 206 NYVISLSQLVRWLGGKAEEL-GVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCR 284 (644)
Q Consensus 206 ~~~v~r~~l~~~L~~~a~~~-Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~~~g~~i~a~~vV~A~G~~ 284 (644)
.+.+++..|.+.|.+.+++. ||+++++ +|+++..++++.+++|++.+ |.++.||+||+|+|.+
T Consensus 188 ~~~~~~~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~---------------G~~i~ad~vI~A~G~~ 251 (550)
T 2e4g_A 188 AWHFDAHLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTAT---------------GRVFDADLFVDCSGFR 251 (550)
T ss_dssp EEEECHHHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETT---------------SCEEECSEEEECCGGG
T ss_pred ceEEcHHHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECC---------------CCEEECCEEEECCCCc
Confidence 67899999999999999998 9999999 99999887767777888765 6679999999999999
Q ss_pred CcchHHHHHHcCCCcccc--cCcccceeEEEEEEeecCCCCCCCcEEEEeccCCCCCCcceEEEEEeCCCeEEEEEEEcc
Q 006466 285 GSLSEKLIKNFKLREKSH--AQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVAL 362 (644)
Q Consensus 285 s~l~~~l~~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~g~~~h~~g~~~~~~~~g~~~l~~~~~~~~~ig~~~~~ 362 (644)
|.+++++ ++...... ..+....+.+......+.... ........ . ..|..|++|..+ ...+|++...
T Consensus 252 S~~~~~~---lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~-----~~g~~~~ipl~~-~~~~g~v~~~ 320 (550)
T 2e4g_A 252 GLLINKA---MEEPFLDMSDHLLNDSAVATQVPHDDDANGV-EPFTSAIA-M-----KSGWTWKIPMLG-RFGTGYVYSS 320 (550)
T ss_dssp CCCCCCC---TCCCEEECTTTCCCCEEEEEEEECCHHHHCC-CSSEEEEE-C-----SSEEEEEEECSS-EEEEEEEECT
T ss_pred hhhHHHH---hCCCcccccccccccceEEEeecccCCcccC-CCceeeee-c-----CCceEEEccCCC-ccceEEEEec
Confidence 9874422 34331000 011111222211111000001 11111111 0 124467888866 5666766532
Q ss_pred CCCCCCCCcHHHHHHhhcCCcchhcccCCceeeecceeeecCCcccCCcccCCCeEEEccCCcccCCCCCcchHHHHHHH
Q 006466 363 NYHNPFLNPYEEFQKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSG 442 (644)
Q Consensus 363 d~~~~~~~~~~~~~~~~~~p~i~~~l~~~~~i~~~~~~i~~gg~~~~~~~~~~~v~LiGDAA~~~~P~~g~G~~~A~~sa 442 (644)
.+ .++.+..+.+...-.....+.....+.+. .+ ..+++..+|++|||||||+++|+.|+|+++|++||
T Consensus 321 ~~----~~~~~~~~~l~~~~~~~p~l~~~~~i~~~------~~--~~~~~~~~rvvliGDAAh~~~P~~GqGi~~a~~da 388 (550)
T 2e4g_A 321 RF----ATEDEAVREFCEMWHLDPETQPLNRIRFR------VG--RNRRAWVGNCVSIGTSSCFVEPLESTGIYFVYAAL 388 (550)
T ss_dssp TT----SCHHHHHHHHHHHTTCCTTTSCCEEEECC------CE--EESCSEETTEEECSTTTEECCGGGSCHHHHHHHHH
T ss_pred CC----CChHHHHHHHHHhhCcCcccCCCceEEec------CC--CccccccCCEEEEehhhcccCccchhhHHHHHHHH
Confidence 22 23333323332110000111212222111 11 12456778999999999999999999999999999
Q ss_pred HHHHHHHhccccCCchHHHHHHHHHHh
Q 006466 443 MLAAEAGFGVLHEDSNMEIYWDTLQKS 469 (644)
Q Consensus 443 ~~lA~~l~~~l~~~~~l~~Ye~~~~~~ 469 (644)
..||+.|........+++.|++.++..
T Consensus 389 ~~La~~L~~~~~~~~~l~~Y~~~~~~~ 415 (550)
T 2e4g_A 389 YQLVKHFPDKSLNPVLTARFNREIETM 415 (550)
T ss_dssp HHHHHTCCCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHhccccCCCHHHHHHHHHHHHHH
Confidence 999998865322246789999988864
No 28
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=99.84 E-value=5.5e-20 Score=200.01 Aligned_cols=312 Identities=14% Similarity=0.097 Sum_probs=165.6
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCC--C-CCcccccCccChHHHHHHhhhhhhcCCC-eeeec
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE--V-GAHIISGNVFEPRALNELLPQWKQEEAP-IRVPV 181 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~--~-g~~~~~g~~i~~~~l~~l~~~~~~~~~~-~~~~~ 181 (644)
|.+||+||||||+||++|+.|++. |++|+||||.+. . ++...++.++....+. ....++..... .....
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~------G~~V~viE~~~~~~~~~g~~~~~~~~~~~~~~-~~~~lg~~~~~~~~~~~ 93 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQH------DVDVTVYTDRKPDEYSGLRLLNTVAHNAVTVQ-REVALDVNEWPSEEFGY 93 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHT------TCEEEEEESCCGGGSTTSCCCCCCCBCHHHHH-HHHHTTCCCSCHHHHCE
T ss_pred CCCCEEEECCcHHHHHHHHHHHHC------CCeEEEEcCCChHhhcccccccchhccchhhh-hhhhcChhhhhhhcccc
Confidence 568999999999999999999999 999999999862 1 1222334444444442 11122110000 00000
Q ss_pred cCCcEEEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCC
Q 006466 182 SSDKFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGS 261 (644)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~ 261 (644)
....+.+... ..+.+.... ....+.+.+..+..+|.+.+++.|++++... + ...+ +.
T Consensus 94 ~~~~~~~~~~-~~~~~~~~~-~~~~~~v~~~~l~~~L~~~~~~~Gv~v~~~~-v---~~~~------l~----------- 150 (430)
T 3ihm_A 94 FGHYYYVGGP-QPMRFYGDL-KAPSRAVDYRLYQPMLMRALEARGGKFCYDA-V---SAED------LE----------- 150 (430)
T ss_dssp EEEEEEECSS-SCEEEEEEE-EEEEBEECHHHHHHHHHHHHHHTTCEEEECC-C---CGGG------HH-----------
T ss_pred cceeEEECCC-Cccccchhc-CCcceeecHHHHHHHHHHHHHHcCCEEEEEe-c---chhh------hh-----------
Confidence 0001111110 011111000 1124678999999999999999999987632 1 0000 00
Q ss_pred cccccccceEEEcCEEEEecCCCCcchHHHHHHcCCCccc--ccCcccceeEEEEEEeecCCCCCCCcEEEEeccCCCCC
Q 006466 262 KKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKS--HAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQK 339 (644)
Q Consensus 262 ~~~~~~~g~~i~a~~vV~A~G~~s~l~~~l~~~~~~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~g~~~h~~g~~~~~~ 339 (644)
.....+|+||+|||.+|.++. +...... ...++ ..+....+..+.... ..+..+..+ +
T Consensus 151 -------~~~~~ad~VV~AdG~~S~~~~-----~~~~~~~~~~~~p~-r~~~~~~~~g~~~~~-~~~~~~~~~--~---- 210 (430)
T 3ihm_A 151 -------GLSEQYDLLVVCTGKYALGKV-----FEKQSENSPFEKPQ-RALCVGLFKGIKEAP-IRAVTMSFS--P---- 210 (430)
T ss_dssp -------HHHTTSSEEEECCCCTTGGGG-----SCBCGGGCCCSSCS-SEEEEEEEESBCCCS-SCCEEEEEE--T----
T ss_pred -------hhcccCCEEEECCCCcchHHh-----ccCCCCCCcccCCC-eeEEEEEEccCCCCC-cCeeeeeec--C----
Confidence 011258999999999997652 3322100 01111 112221112222211 111111111 1
Q ss_pred CcceEEEEEe--CCCeEEEEEEEccC------CCCCC--CCcHHHH----HHhh-cCCcchhcccCCceeeec-ceeeec
Q 006466 340 TYGGSFLYHM--NDRQIALGLVVALN------YHNPF--LNPYEEF----QKFK-HHPAIKPLLEGGTVVQYG-ARTLNE 403 (644)
Q Consensus 340 ~~g~~~l~~~--~~~~~~ig~~~~~d------~~~~~--~~~~~~~----~~~~-~~p~i~~~l~~~~~i~~~-~~~i~~ 403 (644)
..|..|++|. .++...+.++.... +.... .++.+.+ +.+. .+|.+.+.++........ ...+..
T Consensus 211 ~~G~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 290 (430)
T 3ihm_A 211 GHGELIEIPTLSFNGMSTALVLENHIGSDLEVLAHTKYDDDPRAFLDLMLEKLGKHHPSVAERIDPAEFDLANSSLDILQ 290 (430)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEEECTTSSSGGGGTSCTTTCHHHHHHHHHHHHHHHCHHHHTTBCTTTCEESSSTTSEEE
T ss_pred CCcceEEecccCCCcceEEEEEEecCCCcHHHhccccCCCCHHHHHHHHHHHHHHhCccHHHHHhhchhccccCccceee
Confidence 1244667764 34455555443321 11110 1333222 2232 356666666544411100 000000
Q ss_pred CC-----cccCCcccCCCeEE-EccCCcccCCCCCcchHHHHHHHHHHHHHHhccccCCchHHHHHHHHH
Q 006466 404 GG-----LQSIPYPVFPGGAI-IGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHEDSNMEIYWDTLQ 467 (644)
Q Consensus 404 gg-----~~~~~~~~~~~v~L-iGDAA~~~~P~~g~G~~~A~~sa~~lA~~l~~~l~~~~~l~~Ye~~~~ 467 (644)
+. ...+++|..++++| +|||||.++|+.|||+++||+||..||+.|.+...-..+|..|+.+++
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~ll~GDAah~~~p~~g~G~~~a~~da~~l~~~l~~~~~~~~~~~~~~~~r~ 360 (430)
T 3ihm_A 291 GGVVPAFRDGHATLNNGKTIIGLGDIQATVDPVLGQGANMASYAAWILGEEILAHSVYDLRFSEHLERRR 360 (430)
T ss_dssp ECCCCEEBCSEEECTTSCEEEECGGGTEECCGGGCCHHHHHHHHHHHHHHHHHHCSCCSHHHHHHHHHHH
T ss_pred cceeecccccccccCCCCEEEEecCccccCCCchhhhHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 11 12345788889988 999999999999999999999999999999987444678999987776
No 29
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.71 E-value=3.4e-16 Score=173.12 Aligned_cols=144 Identities=22% Similarity=0.152 Sum_probs=97.6
Q ss_pred cccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCC
Q 006466 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSD 184 (644)
Q Consensus 105 ~~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~ 184 (644)
...+||+|||||++||++|+.|++. |++|+||||.+.++.. ....+.+..+..+ ..++... .
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~------G~~V~liEk~~~~g~~--~~~~~~~~~~~~l-~~~g~~~-----~---- 151 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALL------GARVVLVEKRIKFSRH--NVLHLWPFTIHDL-RALGAKK-----F---- 151 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCSSCCCC--CEEECCHHHHHHH-HTTTHHH-----H----
T ss_pred cCCCCEEEECccHHHHHHHHHHHHC------CCeEEEEEeccccCCC--CcccCChhHHHHH-HHcCCcc-----c----
Confidence 3468999999999999999999999 9999999999887642 1222344443222 2221100 0
Q ss_pred cEEEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcC-CCcEEEEEeCcCccccCCCcc
Q 006466 185 KFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDA-DNKVIGIGTNDMGIAKDGSKK 263 (644)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~-~g~v~gV~~~d~g~~~~G~~~ 263 (644)
... +. ......+++..+.+.|.+.+++.|++|+++++|+++..++ ++..++|++.+. .+|+
T Consensus 152 -------~~~--~~----~~~~~~~~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~---~~g~-- 213 (497)
T 2bry_A 152 -------YGR--FC----TGTLDHISIRQLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPN---PPAQ-- 213 (497)
T ss_dssp -------CTT--TT----CTTCCEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESC---CCHH--
T ss_pred -------ccc--cc----ccccccCCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEEC---CCCC--
Confidence 000 00 0112357789999999999999999999999999998752 233345666320 0111
Q ss_pred cccccceEEEcCEEEEecCCCCcchH
Q 006466 264 ENFQRGVELRGRITLLAEGCRGSLSE 289 (644)
Q Consensus 264 ~~~~~g~~i~a~~vV~A~G~~s~l~~ 289 (644)
..+++||+||+|||.+|.+++
T Consensus 214 -----~~~i~ad~VV~A~G~~S~~r~ 234 (497)
T 2bry_A 214 -----LASYEFDVLISAAGGKFVPEG 234 (497)
T ss_dssp -----HHTCCBSEEEECCCTTCCCTT
T ss_pred -----EEEEEcCEEEECCCCCccccc
Confidence 046899999999999998765
No 30
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.65 E-value=3.2e-15 Score=159.31 Aligned_cols=290 Identities=18% Similarity=0.174 Sum_probs=159.1
Q ss_pred cccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCc-ccccCccChHH-------HH-------HHhhh
Q 006466 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAH-IISGNVFEPRA-------LN-------ELLPQ 169 (644)
Q Consensus 105 ~~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~-~~~g~~i~~~~-------l~-------~l~~~ 169 (644)
...+||||||||++|+++|+.|++. |++|+|||+....++. ..+++.+.+.. +. ++++.
T Consensus 15 ~~~~dvvIIGgG~~Gl~~A~~La~~------G~~V~llE~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~ 88 (382)
T 1ryi_A 15 KRHYEAVVIGGGIIGSAIAYYLAKE------NKNTALFESGTMGGRTTSAAAGMLGAHAECEERDAFFDFAMHSQRLYKG 88 (382)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSTTTTHHHHCCCBCCGGGSCSSCSHHHHHHHHHHHHTTT
T ss_pred CCCCCEEEECcCHHHHHHHHHHHhC------CCcEEEEeCCCCCcccchhcCceeccCccCCCCcHHHHHHHHHHHHHHH
Confidence 3469999999999999999999999 9999999998644332 23344443211 11 11111
Q ss_pred hhhc-----CCCee--------eeccC------------CcEEEeccCCcc-ccCCC-------CCCCCcEEEcHHHHHH
Q 006466 170 WKQE-----EAPIR--------VPVSS------------DKFWFLTKDRAF-SLPSP-------FSNRGNYVISLSQLVR 216 (644)
Q Consensus 170 ~~~~-----~~~~~--------~~~~~------------~~~~~~~~~~~~-~~~~~-------~~~~~~~~v~r~~l~~ 216 (644)
+... ..... ..... ..+.+++..... .+|.. ........++...+.+
T Consensus 89 ~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (382)
T 1ryi_A 89 LGEELYALSGVDIRQHNGGMFKLAFSEEDVLQLRQMDDLDSVSWYSKEEVLEKEPYASGDIFGASFIQDDVHVEPYFVCK 168 (382)
T ss_dssp HHHHHHHHHCCCCCCBCCCEEEEESSHHHHHHHHTTTTSTTEEEEEHHHHHHHCTTSCTTCCEEEEETTCCBCCHHHHHH
T ss_pred HHHHHHHhhCCCcCeeecceEEEEeCHHHHHHHHHHhhcCCeEEECHHHHHHhCCCCCcccceEEEeCCCeEEcHHHHHH
Confidence 1100 00000 00000 012222211000 01110 0001124467789999
Q ss_pred HHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccccccceEEEcCEEEEecCCCCcchHHHHHHcC
Q 006466 217 WLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFK 296 (644)
Q Consensus 217 ~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~~~g~~i~a~~vV~A~G~~s~l~~~l~~~~~ 296 (644)
.|.+.+++.|++|+++++|+++..++ +.+ +|.+.+ | +++||.||+|+|.++. .+.+.++
T Consensus 169 ~l~~~~~~~g~~i~~~~~v~~i~~~~-~~~-~v~~~~---------------g-~~~a~~vV~A~G~~s~---~l~~~~~ 227 (382)
T 1ryi_A 169 AYVKAAKMLGAEIFEHTPVLHVERDG-EAL-FIKTPS---------------G-DVWANHVVVASGVWSG---MFFKQLG 227 (382)
T ss_dssp HHHHHHHHTTCEEETTCCCCEEECSS-SSE-EEEETT---------------E-EEEEEEEEECCGGGTH---HHHHHTT
T ss_pred HHHHHHHHCCCEEEcCCcEEEEEEEC-CEE-EEEcCC---------------c-eEEcCEEEECCChhHH---HHHHhcC
Confidence 99999999999999999999998766 445 677765 4 7999999999999864 3444555
Q ss_pred CCcccccCcccceeEEEEEEeecCCCCCCCcEEEEeccCCCCCCcceEEEEEeCCCeEEEEEEEccCCCCCCCCcHHHHH
Q 006466 297 LREKSHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVALNYHNPFLNPYEEFQ 376 (644)
Q Consensus 297 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~h~~g~~~~~~~~g~~~l~~~~~~~~~ig~~~~~d~~~~~~~~~~~~~ 376 (644)
...+ ..+ .-|.......+.. ....++. . .+.|++|..++.+.+|........+.... .+..+
T Consensus 228 ~~~~--~~~---~~g~~~~~~~~~~--~~~~~~~-------~---~~~~~~p~~~g~~~vG~~~~~~~~~~~~~-~~~~~ 289 (382)
T 1ryi_A 228 LNNA--FLP---VKGECLSVWNDDI--PLTKTLY-------H---DHCYIVPRKSGRLVVGATMKPGDWSETPD-LGGLE 289 (382)
T ss_dssp CCCC--CEE---EEEEEEEEECCSS--CCCSEEE-------E---TTEEEEECTTSEEEEECCCEETCCCCSCC-HHHHH
T ss_pred CCCc--eec---cceEEEEECCCCC--CccceEE-------c---CCEEEEEcCCCeEEEeecccccCCCCCCC-HHHHH
Confidence 4321 011 1121111122211 1112211 0 13688898888888886432221111122 22222
Q ss_pred H----hh-cCCcchhcccCCceeeecceeeecCCcccCCcccCCCeEEEccCC-----cccCCCCCcchHHHHHHHHHHH
Q 006466 377 K----FK-HHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAA-----GFLNVPKIKGTHTAMKSGMLAA 446 (644)
Q Consensus 377 ~----~~-~~p~i~~~l~~~~~i~~~~~~i~~gg~~~~~~~~~~~v~LiGDAA-----~~~~P~~g~G~~~A~~sa~~lA 446 (644)
. +. ..|.+.. .+.+. .+.++. ....++..++|++. ....++.|.|+.+|...|.++|
T Consensus 290 ~l~~~~~~~~p~l~~----~~~~~------~w~g~~---~~t~d~~p~ig~~~~~~~l~~~~G~~g~G~~~a~~~g~~la 356 (382)
T 1ryi_A 290 SVMKKAKTMLPAIQN----MKVDR------FWAGLR---PGTKDGKPYIGRHPEDSRILFAAGHFRNGILLAPATGALIS 356 (382)
T ss_dssp HHHHHHHHHCGGGGG----SEEEE------EEEEEE---EECSSSCCEEEEETTEEEEEEEECCSSCTTTTHHHHHHHHH
T ss_pred HHHHHHHHhCCCcCC----Cceee------EEEEec---ccCCCCCcEeccCCCcCCEEEEEcCCcchHHHhHHHHHHHH
Confidence 2 21 2343321 12111 011222 23446677888763 3356789999999999999999
Q ss_pred HHHhcc
Q 006466 447 EAGFGV 452 (644)
Q Consensus 447 ~~l~~~ 452 (644)
+.|...
T Consensus 357 ~~i~~~ 362 (382)
T 1ryi_A 357 DLIMNK 362 (382)
T ss_dssp HHHTTC
T ss_pred HHHhCC
Confidence 998753
No 31
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.62 E-value=2.1e-14 Score=150.09 Aligned_cols=148 Identities=16% Similarity=0.239 Sum_probs=88.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCccccc-----------Ccc--ChHHHHHHhhhhhhc
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISG-----------NVF--EPRALNELLPQWKQE 173 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g-----------~~i--~~~~l~~l~~~~~~~ 173 (644)
.+||+|||||++|+++|+.|++. |++|+||||.+.+|+...+. ..+ ....+.+++..|...
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~------G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAA------GHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQAQ 75 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHHHH
T ss_pred CceEEEECCcHHHHHHHHHHHHC------CCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHHhC
Confidence 57999999999999999999999 99999999998877644321 011 123344555555543
Q ss_pred CCCeeeeccCCcEEEeccCCccccCCCCCCCCcEEE--cHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEe
Q 006466 174 EAPIRVPVSSDKFWFLTKDRAFSLPSPFSNRGNYVI--SLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGT 251 (644)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~ 251 (644)
..... . ...+.+.... .+ .........|.. ....+.+.|. + |++|+++++|+++..++++ + .|++
T Consensus 76 ~~~~~--~-~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~l~~~l~----~-g~~i~~~~~v~~i~~~~~~-~-~v~~ 142 (336)
T 1yvv_A 76 GHVAE--W-TPLLYNFHAG-RL--SPSPDEQVRWVGKPGMSAITRAMR----G-DMPVSFSCRITEVFRGEEH-W-NLLD 142 (336)
T ss_dssp TSEEE--E-CCCEEEESSS-BC--CCCCTTSCEEEESSCTHHHHHHHH----T-TCCEECSCCEEEEEECSSC-E-EEEE
T ss_pred CCeee--c-cccceeccCc-cc--ccCCCCCccEEcCccHHHHHHHHH----c-cCcEEecCEEEEEEEeCCE-E-EEEe
Confidence 21111 0 1111111111 11 000011112221 1233333332 2 8999999999999988755 3 4666
Q ss_pred CcCccccCCCcccccccceEE-EcCEEEEecCCCCcch
Q 006466 252 NDMGIAKDGSKKENFQRGVEL-RGRITLLAEGCRGSLS 288 (644)
Q Consensus 252 ~d~g~~~~G~~~~~~~~g~~i-~a~~vV~A~G~~s~l~ 288 (644)
.+ |..+ .+|+||+|+|.++.++
T Consensus 143 ~~---------------g~~~~~a~~vV~a~g~~~~~~ 165 (336)
T 1yvv_A 143 AE---------------GQNHGPFSHVIIATPAPQAST 165 (336)
T ss_dssp TT---------------SCEEEEESEEEECSCHHHHGG
T ss_pred CC---------------CcCccccCEEEEcCCHHHHHH
Confidence 55 4444 5999999999887655
No 32
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.61 E-value=5.6e-14 Score=149.75 Aligned_cols=291 Identities=17% Similarity=0.115 Sum_probs=153.1
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcc--cccCccCh----HHH-------HHHhhhhhh
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHI--ISGNVFEP----RAL-------NELLPQWKQ 172 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~--~~g~~i~~----~~l-------~~l~~~~~~ 172 (644)
.++||+|||||++|+++|+.|++. |++|+||||.. ++... .+++.+.+ ... .++++.+..
T Consensus 4 ~~~dVvIIGgGi~Gl~~A~~La~~------G~~V~lle~~~-~~~gas~~~~g~~~~~~~~~~~~~l~~~~~~~~~~l~~ 76 (382)
T 1y56_B 4 EKSEIVVIGGGIVGVTIAHELAKR------GEEVTVIEKRF-IGSGSTFRCGTGIRQQFNDEANVRVMKRSVELWKKYSE 76 (382)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSS-TTCSHHHHCCCCCCCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC------CCeEEEEeCCC-CCCCccccccCeeeecCCChHHHHHHHHHHHHHHHHHH
Confidence 468999999999999999999999 99999999984 44321 23333321 100 112222211
Q ss_pred c-CCCe------eeecc-----------------CCcEEEeccCCc-cccCCC--------CCCCCcEEEcHHHHHHHHH
Q 006466 173 E-EAPI------RVPVS-----------------SDKFWFLTKDRA-FSLPSP--------FSNRGNYVISLSQLVRWLG 219 (644)
Q Consensus 173 ~-~~~~------~~~~~-----------------~~~~~~~~~~~~-~~~~~~--------~~~~~~~~v~r~~l~~~L~ 219 (644)
. .... ..... ...+.+++.... ..+|.. ........++...+.+.|.
T Consensus 77 ~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 156 (382)
T 1y56_B 77 EYGFSFKQTGYLFLLYDDEEVKTFKRNIEIQNKFGVPTKLITPEEAKEIVPLLDISEVIAASWNPTDGKADPFEATTAFA 156 (382)
T ss_dssp HHTCCEECCCEEEEECSHHHHHHHHHHHHHHHHTTCCCEEECHHHHHHSSTTCCCTTCCEEEEETTCCEECHHHHHHHHH
T ss_pred HhCCCeeccceEEEEeCHHHHHHHHHHHHHHHhcCCCcEEeCHHHHHHhCCCCCcccceEEEEcCCCeeECHHHHHHHHH
Confidence 1 0000 00000 000112211000 001110 0011234578899999999
Q ss_pred HHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccccccceEEEcCEEEEecCCCCcchHHHHHHcCCC-
Q 006466 220 GKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLR- 298 (644)
Q Consensus 220 ~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~~~g~~i~a~~vV~A~G~~s~l~~~l~~~~~~~- 298 (644)
+.+++.|++|+.+++|+++..++ +.+.+|++.+ | +++||.||+|+|.++. .+.+.+++.
T Consensus 157 ~~~~~~Gv~i~~~~~v~~i~~~~-~~v~gv~~~~---------------g-~i~a~~VV~A~G~~s~---~l~~~~g~~~ 216 (382)
T 1y56_B 157 VKAKEYGAKLLEYTEVKGFLIEN-NEIKGVKTNK---------------G-IIKTGIVVNATNAWAN---LINAMAGIKT 216 (382)
T ss_dssp HHHHHTTCEEECSCCEEEEEESS-SBEEEEEETT---------------E-EEECSEEEECCGGGHH---HHHHHHTCCS
T ss_pred HHHHHCCCEEECCceEEEEEEEC-CEEEEEEECC---------------c-EEECCEEEECcchhHH---HHHHHcCCCc
Confidence 99999999999999999998876 5676788765 4 7999999999999863 344444543
Q ss_pred -cccccCcccceeEEEEEEeecCCCCCCC-cEEEEeccCCCCCCcceEEEEEeCCCeEEEEEE-E-ccCCCCCCCCcHHH
Q 006466 299 -EKSHAQHQTYALGIKEVWEIDEGKHNPG-EILHTLGWPLDQKTYGGSFLYHMNDRQIALGLV-V-ALNYHNPFLNPYEE 374 (644)
Q Consensus 299 -~~~~~~~~~~~~g~~~~~~~~~~~~~~g-~~~h~~g~~~~~~~~g~~~l~~~~~~~~~ig~~-~-~~d~~~~~~~~~~~ 374 (644)
. +....-|.- ..+........ .++... . ..+.|+.|..++ +.+|.. . ..+..+...+ .+.
T Consensus 217 ~~-----~~~~~~g~~--~~~~~~~~~~~~~~~~~~----~---~~~~y~~p~~~g-~~iG~~~~~~~~~~~~~~~-~~~ 280 (382)
T 1y56_B 217 KI-----PIEPYKHQA--VITQPIKRGTINPMVISF----K---YGHAYLTQTFHG-GIIGGIGYEIGPTYDLTPT-YEF 280 (382)
T ss_dssp CC-----CCEEEEEEE--EEECCCSTTSSCSEEEES----T---TTTEEEECCSSS-CCEEECSCCBSSCCCCCCC-HHH
T ss_pred Cc-----CCCeeEeEE--EEEccCCcccCCCeEEec----C---CCeEEEEEeCCe-EEEecCCCCCCCCCCCCCC-HHH
Confidence 2 101011111 11111111111 222211 1 023567777777 666641 1 1111111122 222
Q ss_pred HHHh----h-cCCcchhcccCCceeeecceeeecCCcccCCcccCCCeEEEccCC-----cccCCCCCcchHHHHHHHHH
Q 006466 375 FQKF----K-HHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAA-----GFLNVPKIKGTHTAMKSGML 444 (644)
Q Consensus 375 ~~~~----~-~~p~i~~~l~~~~~i~~~~~~i~~gg~~~~~~~~~~~v~LiGDAA-----~~~~P~~g~G~~~A~~sa~~ 444 (644)
.+.+ . ..|.+. ..+.+.. +.++. ....++..+||... .....+.|.|+.+|...|.+
T Consensus 281 ~~~l~~~~~~~~p~l~----~~~~~~~------~~g~r---~~t~d~~p~ig~~~~~~~~~~~~G~~g~G~~~a~~~g~~ 347 (382)
T 1y56_B 281 LREVSYYFTKIIPALK----NLLILRT------WAGYY---AKTPDSNPAIGRIEELNDYYIAAGFSGHGFMMAPAVGEM 347 (382)
T ss_dssp HHHHHHHHHHHCGGGG----GSEEEEE------EEEEE---EECTTSCCEEEEESSSBTEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCcC----CCCceEE------EEecc---ccCCCCCcEeccCCCCCCEEEEEecCcchHhhhHHHHHH
Confidence 2222 1 234332 1222211 11222 22335556666653 22346788999999999999
Q ss_pred HHHHHhcc
Q 006466 445 AAEAGFGV 452 (644)
Q Consensus 445 lA~~l~~~ 452 (644)
+|+.|...
T Consensus 348 la~~i~~~ 355 (382)
T 1y56_B 348 VAELITKG 355 (382)
T ss_dssp HHHHHHHS
T ss_pred HHHHHhCC
Confidence 99988753
No 33
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.61 E-value=6.3e-14 Score=150.38 Aligned_cols=197 Identities=16% Similarity=0.097 Sum_probs=113.2
Q ss_pred EEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccccccceEEEcCEEEEecCCCCc
Q 006466 207 YVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 286 (644)
Q Consensus 207 ~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~~~g~~i~a~~vV~A~G~~s~ 286 (644)
..++...+.+.|.+.+++.|++++++++|+++..++ +.+++|++.+ | +++||.||+|+|.++.
T Consensus 169 ~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~-~~~~~v~~~~---------------g-~~~a~~vV~a~G~~s~ 231 (405)
T 2gag_B 169 GIAKHDHVAWAFARKANEMGVDIIQNCEVTGFIKDG-EKVTGVKTTR---------------G-TIHAGKVALAGAGHSS 231 (405)
T ss_dssp BBCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEESS-SBEEEEEETT---------------C-CEEEEEEEECCGGGHH
T ss_pred ccCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEeC-CEEEEEEeCC---------------c-eEECCEEEECCchhHH
Confidence 345677899999999999999999999999998875 5677888765 4 6899999999999862
Q ss_pred chHHHHHHcCCCcccccCcccceeEEEEEEeecCCCCCCCcEEEEeccCCCCCCcceEEEEEeCCCeEEEEEEEcc-CCC
Q 006466 287 LSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVAL-NYH 365 (644)
Q Consensus 287 l~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~h~~g~~~~~~~~g~~~l~~~~~~~~~ig~~~~~-d~~ 365 (644)
.+.+.+++..+ ..+ ..+...+.+ +... ....++.. .. ++.|+.|..++.+.+|..... ...
T Consensus 232 ---~l~~~~g~~~~--~~~---~~~~~~~~~-~~~~-~~~~~~~~------~~--~~~y~~p~~~g~~~ig~~~~~~~~~ 293 (405)
T 2gag_B 232 ---VLAEMAGFELP--IQS---HPLQALVSE-LFEP-VHPTVVMS------NH--IHVYVSQAHKGELVMGAGIDSYNGY 293 (405)
T ss_dssp ---HHHHHHTCCCC--EEE---EEEEEEEEE-EBCS-CCCSEEEE------TT--TTEEEEECTTSEEEEEEEECSSCCC
T ss_pred ---HHHHHcCCCCC--ccc---cceeEEEec-CCcc-ccCceEEe------CC--CcEEEEEcCCCcEEEEeccCCCCcc
Confidence 34444555421 011 111111111 1111 11122211 11 235778877888888866432 111
Q ss_pred CCCCCcHHHHHHh----h-cCCcchhcccCCceeeecceeeecCCcccCCcccCCCeEEEccCC----cccCCCCCcchH
Q 006466 366 NPFLNPYEEFQKF----K-HHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAA----GFLNVPKIKGTH 436 (644)
Q Consensus 366 ~~~~~~~~~~~~~----~-~~p~i~~~l~~~~~i~~~~~~i~~gg~~~~~~~~~~~v~LiGDAA----~~~~P~~g~G~~ 436 (644)
+...+ .+..+.+ . ..|.+. ..+.+.. +.++. ....++..+||+.. .....+.|.|+.
T Consensus 294 ~~~~~-~~~~~~l~~~~~~~~p~l~----~~~~~~~------w~g~~---~~t~d~~p~ig~~~~~~l~~~~G~~g~G~~ 359 (405)
T 2gag_B 294 GQRGA-FHVIQEQMAAAVELFPIFA----RAHVLRT------WGGIV---DTTMDASPIISKTPIQNLYVNCGWGTGGFK 359 (405)
T ss_dssp SSCCC-THHHHHHHHHHHHHCGGGG----GCEECEE------EEEEE---EEETTSCCEEEECSSBTEEEEECCGGGCST
T ss_pred ccCCC-HHHHHHHHHHHHHhCCccc----cCCcceE------Eeecc---ccCCCCCCEecccCCCCEEEEecCCCchhh
Confidence 11122 1222222 1 234332 1121110 11122 23456778888864 223456678999
Q ss_pred HHHHHHHHHHHHHhcc
Q 006466 437 TAMKSGMLAAEAGFGV 452 (644)
Q Consensus 437 ~A~~sa~~lA~~l~~~ 452 (644)
.|...|..+|+.|...
T Consensus 360 ~a~~~g~~la~~i~g~ 375 (405)
T 2gag_B 360 GTPGAGFTLAHTIAND 375 (405)
T ss_dssp THHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCC
Confidence 9999999999988753
No 34
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.58 E-value=6.7e-14 Score=147.82 Aligned_cols=170 Identities=18% Similarity=0.221 Sum_probs=103.6
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcc--cccCccC------hHH----H----HHHhhh
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHI--ISGNVFE------PRA----L----NELLPQ 169 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~--~~g~~i~------~~~----l----~~l~~~ 169 (644)
+++||||||||++|+++|+.|++. |++|+||||.+.++... .+++.+. ... + .+.+..
T Consensus 3 ~~~dvvIIG~G~~Gl~~A~~La~~------G~~V~vlE~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (369)
T 3dme_A 3 TDIDCIVIGAGVVGLAIARALAAG------GHEVLVAEAAEGIGTGTSSRNSEVIHAGIYYPADSLKARLCVRGKHLLYE 76 (369)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSSCSTTSSSCCEECCCCSSCTTCHHHHHHHHHHHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC------CCeEEEEeCCCCCCCccCcCCccccccCccCCCCCHhHHHHHHHHHHHHH
Confidence 358999999999999999999999 99999999987554322 2222221 100 0 011222
Q ss_pred hhh-cCCCee------eeccCC------------------cEEEeccCCcc-ccCCC-----CCCCCcEEEcHHHHHHHH
Q 006466 170 WKQ-EEAPIR------VPVSSD------------------KFWFLTKDRAF-SLPSP-----FSNRGNYVISLSQLVRWL 218 (644)
Q Consensus 170 ~~~-~~~~~~------~~~~~~------------------~~~~~~~~~~~-~~~~~-----~~~~~~~~v~r~~l~~~L 218 (644)
+.. ...... ...... .+.+++..... ..|.. ........++...+.+.|
T Consensus 77 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l 156 (369)
T 3dme_A 77 YCAARGVPHQRLGKLIVATSDAEASQLDSIARRAGANGVDDLQHIDGAAARRLEPALHCTAALVSPSTGIVDSHALMLAY 156 (369)
T ss_dssp HHHHHTCCEECCCEEEEECSHHHHTTHHHHHHHHHHTTCCCCEEEEHHHHHHHCTTCCCSEEEEETTCEEECHHHHHHHH
T ss_pred HHHHcCCCcccCCEEEEecCHHHHHHHHHHHHHHHHcCCCceeecCHHHHHHhCCCceeeeeeECCCCEEECHHHHHHHH
Confidence 111 111100 000000 01111110000 01110 011224457889999999
Q ss_pred HHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccccccceEEEcCEEEEecCCCCcchHHHHHHc-CC
Q 006466 219 GGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNF-KL 297 (644)
Q Consensus 219 ~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~~~g~~i~a~~vV~A~G~~s~l~~~l~~~~-~~ 297 (644)
.+.+++.|++|+++++|+++..++++.+ .|.+.+ |+ ..+++||.||+|+|.++ ..|.+.+ ++
T Consensus 157 ~~~~~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~------g~-------~~~~~a~~VV~A~G~~s---~~l~~~~~g~ 219 (369)
T 3dme_A 157 QGDAESDGAQLVFHTPLIAGRVRPEGGF-ELDFGG------AE-------PMTLSCRVLINAAGLHA---PGLARRIEGI 219 (369)
T ss_dssp HHHHHHTTCEEECSCCEEEEEECTTSSE-EEEECT------TS-------CEEEEEEEEEECCGGGH---HHHHHTEETS
T ss_pred HHHHHHCCCEEECCCEEEEEEEcCCceE-EEEECC------Cc-------eeEEEeCEEEECCCcch---HHHHHHhcCC
Confidence 9999999999999999999998875534 577654 21 15799999999999885 4666667 76
Q ss_pred C
Q 006466 298 R 298 (644)
Q Consensus 298 ~ 298 (644)
+
T Consensus 220 ~ 220 (369)
T 3dme_A 220 P 220 (369)
T ss_dssp C
T ss_pred C
Confidence 5
No 35
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.57 E-value=2.2e-13 Score=144.71 Aligned_cols=293 Identities=16% Similarity=0.090 Sum_probs=154.0
Q ss_pred cccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCc--ccccCccCh----HHHHHH----hhhhhhcC
Q 006466 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAH--IISGNVFEP----RALNEL----LPQWKQEE 174 (644)
Q Consensus 105 ~~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~--~~~g~~i~~----~~l~~l----~~~~~~~~ 174 (644)
...+||||||||++|+++|+.|+ . |++|+||||.+.++.. ..+++.+.+ ....++ ...|....
T Consensus 7 ~~~~dv~IIGaGi~Gls~A~~La-~------G~~V~vlE~~~~~g~~as~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~ 79 (381)
T 3nyc_A 7 PIEADYLVIGAGIAGASTGYWLS-A------HGRVVVLEREAQPGYHSTGRSAAHYTVAYGTPQVRALTAASRAFFDNPP 79 (381)
T ss_dssp EEECSEEEECCSHHHHHHHHHHT-T------TSCEEEECSSSSTTSSGGGSCCCEECSSSSCHHHHHHHHHHHHHHHSCC
T ss_pred CCcCCEEEECCcHHHHHHHHHHh-C------CCCEEEEECCCCccccccccccceeecccCCHHHHHHHHHHHHHHHHhh
Confidence 34689999999999999999999 6 9999999999766532 233333321 111111 12222211
Q ss_pred CCe-e-eeccCCc--------------------------EEEeccCCcc-ccCCC--------CCCCCcEEEcHHHHHHH
Q 006466 175 API-R-VPVSSDK--------------------------FWFLTKDRAF-SLPSP--------FSNRGNYVISLSQLVRW 217 (644)
Q Consensus 175 ~~~-~-~~~~~~~--------------------------~~~~~~~~~~-~~~~~--------~~~~~~~~v~r~~l~~~ 217 (644)
..+ . ....... +.+++..... .+|.. ........++...+.+.
T Consensus 80 ~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (381)
T 3nyc_A 80 AGFCEHPLLSPRPEMVVDFSDDPEELRRQYESGKALVPQMRLLDAEQACSIVPVLRRDKVFGATYDPTGADIDTDALHQG 159 (381)
T ss_dssp TTSCSSCSEEECCEEEECSSCCHHHHHHHHHHHHHHCTTCEEECHHHHHHHSTTBCGGGCCCEEEETTCEEECHHHHHHH
T ss_pred hhhCCcccccccceEEEechHHHHHHHHHHHHHHHcCCCcEEeCHHHHHHhCCCcccccceEEEEcCCCceECHHHHHHH
Confidence 000 0 0000000 1111100000 01100 11122456788999999
Q ss_pred HHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccccccceEEEcCEEEEecCCCCcchHHHHHHcCC
Q 006466 218 LGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKL 297 (644)
Q Consensus 218 L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~~~g~~i~a~~vV~A~G~~s~l~~~l~~~~~~ 297 (644)
|.+.+++.|++|+++++|+++..+++ . ++|++.+ | +++||.||+|+|.++ ..+.+.+++
T Consensus 160 l~~~a~~~Gv~i~~~~~V~~i~~~~~-~-~~V~t~~---------------g-~i~a~~VV~A~G~~s---~~l~~~~g~ 218 (381)
T 3nyc_A 160 YLRGIRRNQGQVLCNHEALEIRRVDG-A-WEVRCDA---------------G-SYRAAVLVNAAGAWC---DAIAGLAGV 218 (381)
T ss_dssp HHHHHHHTTCEEESSCCCCEEEEETT-E-EEEECSS---------------E-EEEESEEEECCGGGH---HHHHHHHTC
T ss_pred HHHHHHHCCCEEEcCCEEEEEEEeCC-e-EEEEeCC---------------C-EEEcCEEEECCChhH---HHHHHHhCC
Confidence 99999999999999999999998764 3 5788765 4 799999999999886 345555665
Q ss_pred CcccccCcccceeEEEEEEeecCCCCCCC-cEEEEeccCCCCCCcceEEEEEeCCCeEEEEEEEccC--CCCCCCCcH--
Q 006466 298 REKSHAQHQTYALGIKEVWEIDEGKHNPG-EILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVALN--YHNPFLNPY-- 372 (644)
Q Consensus 298 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~g-~~~h~~g~~~~~~~~g~~~l~~~~~~~~~ig~~~~~d--~~~~~~~~~-- 372 (644)
.. .+-.-.-|.......+....... ..+.. .+ .+.|+.|.. +.+.+|-..... ..+...+..
T Consensus 219 ~~----~~~~p~rg~~~~~~~~~~~~~~~~p~~~~------~~--~~~y~~p~~-g~~~ig~~~~~~~~~~~~~~~~~~~ 285 (381)
T 3nyc_A 219 RP----LGLQPKRRSAFIFAPPPGIDCHDWPMLVS------LD--ESFYLKPDA-GMLLGSPANADPVEAHDVQPEQLDI 285 (381)
T ss_dssp CC----CCCEEEEEEEEEECCCTTCCCTTCCEEEE------TT--SSCEEEEET-TEEEEECCCCEECCSSCCCCCHHHH
T ss_pred CC----CceeeeEEEEEEECCCcCCCcCccceEEe------CC--CCEEEEeCC-CcEEEeCCcCCCCCcccCCCChHHH
Confidence 31 00011111111222222111111 11111 11 124677776 677776332111 011111211
Q ss_pred -HHHHHhhcCCcchhcccCCceeeecceeeecCCcccCCcccCCCeEEEccCC-----cccCCCCCcchHHHHHHHHHHH
Q 006466 373 -EEFQKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAA-----GFLNVPKIKGTHTAMKSGMLAA 446 (644)
Q Consensus 373 -~~~~~~~~~p~i~~~l~~~~~i~~~~~~i~~gg~~~~~~~~~~~v~LiGDAA-----~~~~P~~g~G~~~A~~sa~~lA 446 (644)
+.++++...|. +...+.+. .+.|+. ..+.++..+||... .....+.|.|+.+|...|.++|
T Consensus 286 ~~~~~~~~~~~~----l~~~~~~~------~w~G~r---~~t~D~~p~ig~~~~~~~l~~a~G~~g~G~~~ap~~g~~la 352 (381)
T 3nyc_A 286 ATGMYLIEEATT----LTIRRPEH------TWAGLR---SFVADGDLVAGYAANAEGFFWVAAQGGYGIQTSAAMGEASA 352 (381)
T ss_dssp HHHHHHHHHHBS----CCCCCCSE------EEEEEE---EECTTSCCEEEECTTSTTEEEEECCTTCTTTTHHHHHHHHH
T ss_pred HHHHHHHHhcCC----Ccccceee------eeEEcc---ccCCCCCceecCCCCCCCeEEEEcCCChhHhhCHHHHHHHH
Confidence 11222222221 11111111 112222 33445666777643 2334567899999999999999
Q ss_pred HHHhc
Q 006466 447 EAGFG 451 (644)
Q Consensus 447 ~~l~~ 451 (644)
+.|..
T Consensus 353 ~~i~g 357 (381)
T 3nyc_A 353 ALIRH 357 (381)
T ss_dssp HHHTT
T ss_pred HHHhC
Confidence 98865
No 36
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.54 E-value=6.8e-14 Score=160.91 Aligned_cols=158 Identities=14% Similarity=0.077 Sum_probs=98.1
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCc--ccccCccChH------HH-----------HHH
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAH--IISGNVFEPR------AL-----------NEL 166 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~--~~~g~~i~~~------~l-----------~~l 166 (644)
..+||||||||++|+++|+.|++. |++|+||||.+.++.. ..+++.+.+. .+ .++
T Consensus 263 ~~~DVvIIGgGiaGlsaA~~La~~------G~~V~vlEk~~~~g~gaS~~~~G~l~~~~~~~~~~~~~~~~~~~~~a~~~ 336 (689)
T 3pvc_A 263 RCDDIAIIGGGIVSALTALALQRR------GAVVTLYCADAQPAQGASGNRQGALYPLLNGKNDALETFFTSAFTFARRQ 336 (689)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHTT------TCCEEEEESSSSTTCSGGGCSCEEECCCCCSSCSHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEECCcHHHHHHHHHHHHC------CCcEEEEeCCCccccccccccCCEEecCCCCCChHHHHHHHHHHHHHHHH
Confidence 358999999999999999999999 9999999998766532 2333333221 11 122
Q ss_pred hhhhhhcCCCee--------eecc----------------CCcEEEeccCCc---cccCCC---CCCCCcEEEcHHHHHH
Q 006466 167 LPQWKQEEAPIR--------VPVS----------------SDKFWFLTKDRA---FSLPSP---FSNRGNYVISLSQLVR 216 (644)
Q Consensus 167 ~~~~~~~~~~~~--------~~~~----------------~~~~~~~~~~~~---~~~~~~---~~~~~~~~v~r~~l~~ 216 (644)
+..+........ .... .+.+.+++.... ..++.. ........++...+.+
T Consensus 337 ~~~l~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~~~l~~~~gg~~~p~~g~v~p~~l~~ 416 (689)
T 3pvc_A 337 YDQLLEQGIAFDHQWCGVSQLAFDDKSRGKIEKMLHTQWPVEFAEAMSREQLSELAGLDCAHDGIHYPAGGWLCPSDLTH 416 (689)
T ss_dssp HHHHHHTTCCCCEECCCEEEECCSHHHHHHHHHHTTSCCCTTTCEEECHHHHHHHHSSCCSSCEEEETTCEEECHHHHHH
T ss_pred HHHhhhhccccccccCceEEeccCHHHHHHHHHHHhcCCChHHhhccCHHHHHHhcCCCcccceEEecCCeEECHHHHHH
Confidence 222211111000 0000 000011110000 001100 0112244568899999
Q ss_pred HHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccccccce-EEEcCEEEEecCCCCc
Q 006466 217 WLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGV-ELRGRITLLAEGCRGS 286 (644)
Q Consensus 217 ~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~~~g~-~i~a~~vV~A~G~~s~ 286 (644)
.|.+.+++.|++|+++++|++++.++++ + .|.+.+ |. +++||.||+|+|.++.
T Consensus 417 aL~~~a~~~Gv~i~~~t~V~~l~~~~~~-v-~V~t~~---------------G~~~i~Ad~VVlAtG~~s~ 470 (689)
T 3pvc_A 417 ALMMLAQQNGMTCHYQHELQRLKRIDSQ-W-QLTFGQ---------------SQAAKHHATVILATGHRLP 470 (689)
T ss_dssp HHHHHHHHTTCEEEESCCEEEEEECSSS-E-EEEEC----------------CCCCEEESEEEECCGGGTT
T ss_pred HHHHHHHhCCCEEEeCCeEeEEEEeCCe-E-EEEeCC---------------CcEEEECCEEEECCCcchh
Confidence 9999999999999999999999988754 4 677765 44 6999999999999874
No 37
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.54 E-value=6.1e-14 Score=161.02 Aligned_cols=157 Identities=14% Similarity=0.129 Sum_probs=98.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCC--cccccCccCh------HHHHHH--------hhhh
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGA--HIISGNVFEP------RALNEL--------LPQW 170 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~--~~~~g~~i~~------~~l~~l--------~~~~ 170 (644)
.+||||||||++|+++|+.|++. |++|+||||.+.+++ ...+++.+.+ ..+.++ ...|
T Consensus 272 ~~DVvIIGgGiaGlsaA~~La~~------G~~V~vlEk~~~~g~gaS~~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (676)
T 3ps9_A 272 KREAAIIGGGIASALLSLALLRR------GWQVTLYCADEAPALGASGNRQGALYPLLSKHDEALNRFFSNAFTFARRFY 345 (676)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT------TCEEEEEESSSSSSCSTTCCSCEEECCCCCSSCHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHHC------CCeEEEEeCCCcccccCccCCCceecCcCCCCccHHHHHHHHHHHHHHHHH
Confidence 48999999999999999999999 999999999876653 2233333322 111111 1112
Q ss_pred hhcCCCee--------ee----------------ccCCcEEEeccCCc---cccCCC---CCCCCcEEEcHHHHHHHHHH
Q 006466 171 KQEEAPIR--------VP----------------VSSDKFWFLTKDRA---FSLPSP---FSNRGNYVISLSQLVRWLGG 220 (644)
Q Consensus 171 ~~~~~~~~--------~~----------------~~~~~~~~~~~~~~---~~~~~~---~~~~~~~~v~r~~l~~~L~~ 220 (644)
........ .. ...+.+.+++.... ..++.. ........++...+.+.|.+
T Consensus 346 ~~l~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~~~l~~~~gg~~~p~~g~v~p~~l~~aL~~ 425 (676)
T 3ps9_A 346 DQLPVKFDHDWCGVTQLGWDEKSQHKIAQMLSMDLPAELAVAVEANAVEQITGVATNCSGITYPQGGWLCPAELTRNVLE 425 (676)
T ss_dssp HHCCSCCCEECCCEEEECCSHHHHHHHHHHHTSCCCTTTCEEECHHHHHHHHSSCCSSCEEEETTCEEECHHHHHHHHHH
T ss_pred HHCCCCcCcCcCCeeeecCCHHHHHHHHHHHhcCCcHHHhhhCCHHHHHHhhCCCccCCcEEecCCeeeCHHHHHHHHHH
Confidence 11111000 00 00001112111000 001100 11122456788999999999
Q ss_pred HHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccccccceEEEcCEEEEecCCCCc
Q 006466 221 KAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 286 (644)
Q Consensus 221 ~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~~~g~~i~a~~vV~A~G~~s~ 286 (644)
.+++.|++|+++++|++++.+++ .+ +|++.+ |.+++||.||+|+|.++.
T Consensus 426 ~a~~~Gv~i~~~t~V~~l~~~~~-~v-~V~t~~---------------G~~i~Ad~VVlAtG~~s~ 474 (676)
T 3ps9_A 426 LAQQQGLQIYYQYQLQNFSRKDD-CW-LLNFAG---------------DQQATHSVVVLANGHQIS 474 (676)
T ss_dssp HHHHTTCEEEESCCEEEEEEETT-EE-EEEETT---------------SCEEEESEEEECCGGGGG
T ss_pred HHHhCCCEEEeCCeeeEEEEeCC-eE-EEEECC---------------CCEEECCEEEECCCcchh
Confidence 99999999999999999998774 34 677765 567999999999999874
No 38
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.50 E-value=1e-12 Score=140.12 Aligned_cols=70 Identities=19% Similarity=0.245 Sum_probs=55.5
Q ss_pred cEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccccccceEEEcCEEEEecCCCC
Q 006466 206 NYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRG 285 (644)
Q Consensus 206 ~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~~~g~~i~a~~vV~A~G~~s 285 (644)
...++...+.+.|.+.+++.|++|+++++|+++..++++ + .|++.+ | +++||.||+|+|.++
T Consensus 144 ~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~-~-~v~~~~---------------g-~~~a~~vV~A~G~~~ 205 (389)
T 2gf3_A 144 SGVLFSENCIRAYRELAEARGAKVLTHTRVEDFDISPDS-V-KIETAN---------------G-SYTADKLIVSMGAWN 205 (389)
T ss_dssp CEEEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSC-E-EEEETT---------------E-EEEEEEEEECCGGGH
T ss_pred CcEEeHHHHHHHHHHHHHHCCCEEEcCcEEEEEEecCCe-E-EEEeCC---------------C-EEEeCEEEEecCccH
Confidence 345678899999999999999999999999999887644 3 466654 3 699999999999875
Q ss_pred cchHHHHHHcC
Q 006466 286 SLSEKLIKNFK 296 (644)
Q Consensus 286 ~l~~~l~~~~~ 296 (644)
..+.+.++
T Consensus 206 ---~~l~~~~g 213 (389)
T 2gf3_A 206 ---SKLLSKLN 213 (389)
T ss_dssp ---HHHGGGGT
T ss_pred ---HHHhhhhc
Confidence 34544444
No 39
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.49 E-value=4.7e-12 Score=141.84 Aligned_cols=217 Identities=13% Similarity=0.112 Sum_probs=113.2
Q ss_pred EEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccccccceEEEcCEEEEecCCCCcc
Q 006466 208 VISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSL 287 (644)
Q Consensus 208 ~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~~~g~~i~a~~vV~A~G~~s~l 287 (644)
.++...+...|.+.+++.|++|+++++|+++..++ +.+++|++.+. .+|+ +.+++||.||.|+|.++
T Consensus 166 ~vd~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~-g~v~gV~~~d~---~tg~-------~~~i~A~~VV~AaG~~s-- 232 (561)
T 3da1_A 166 RTDDARLTLEIMKEAVARGAVALNYMKVESFIYDQ-GKVVGVVAKDR---LTDT-------THTIYAKKVVNAAGPWV-- 232 (561)
T ss_dssp ECCHHHHHHHHHHHHHHTTCEEEESEEEEEEEEET-TEEEEEEEEET---TTCC-------EEEEEEEEEEECCGGGH--
T ss_pred eEcHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcC-CeEEEEEEEEc---CCCc-------eEEEECCEEEECCCcch--
Confidence 57789999999999999999999999999999875 67888887651 1232 35799999999999886
Q ss_pred hHHHHHHcCCCcccccCcccceeEEEEEEeecCCCCCCCcEEEEeccCCCCCCcceEEEEEeCCCeEEEEEEEc---cCC
Q 006466 288 SEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVA---LNY 364 (644)
Q Consensus 288 ~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~h~~g~~~~~~~~g~~~l~~~~~~~~~ig~~~~---~d~ 364 (644)
..+.+..+... ..+-...-|...+ ++.........+. +..+ .++. ..|++|. ++.+.||.... .+.
T Consensus 233 -~~l~~~~g~~~---~~~v~p~kG~~lv--l~~~~~~~~~~~~-~~~~-~dgr--~v~~iP~-~g~~~iGtT~~~~~~~~ 301 (561)
T 3da1_A 233 -DTLREKDRSKH---GKYLKLSKGVHLV--VDQSRFPLRQAVY-FDTE-SDGR--MIFAIPR-EGKTYIGTTDTFYDKDI 301 (561)
T ss_dssp -HHHHHTTTCCC---SSEEEEEEEEEEE--EEGGGSCCSSEEE-ECCS-SSCC--CEEEEEE-TTEEEECCCCEEECSCT
T ss_pred -HHHHHhcCCCC---CceEEeccEEEEE--ECCccCCCceEEE-eccC-CCCc--EEEEEec-CCCEEEcCCCCccCCCc
Confidence 34444455431 0111111222222 2221111122221 1111 2222 2578888 56777775321 122
Q ss_pred CCCCCCcHHHHHHhh-----cCCcchhcccCCceee--ecceeeecCCcccCCcccCCCeEEEccCCcccCCCCCcchHH
Q 006466 365 HNPFLNPYEEFQKFK-----HHPAIKPLLEGGTVVQ--YGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHT 437 (644)
Q Consensus 365 ~~~~~~~~~~~~~~~-----~~p~i~~~l~~~~~i~--~~~~~i~~gg~~~~~~~~~~~v~LiGDAA~~~~P~~g~G~~~ 437 (644)
.++..++. +.+.+. ..|.+. +.....+. .|.|.+...+-......+.+.++..+ ..+.++-++|+ +.+
T Consensus 302 ~~~~~t~~-~i~~ll~~~~~~~P~l~--~~~~~v~~~~aGlRPl~~~~~~~~~~~sR~~~i~~~-~~gli~i~Ggk-~Tt 376 (561)
T 3da1_A 302 ASPRMTVE-DRDYILAAANYMFPSLR--LTADDVESSWAGLRPLIHEEGKKASEISRKDEIFFS-DSGLISIAGGK-LTG 376 (561)
T ss_dssp TCCCCCHH-HHHHHHHHHHHHCTTCC--CCTTTEEEEEEEEEEEEEC-----------CCEEEC-SSCCEEECCCC-STT
T ss_pred CCCCCCHH-HHHHHHHHHHHhCCCCC--CChhhEEEEeEEeccccCCCCCCccccccceEEEec-CCCeEEEeCCh-hhh
Confidence 23333432 222221 123221 11122222 24443322211111122334455554 47888888888 666
Q ss_pred HHHHHHHHHHHHhccc
Q 006466 438 AMKSGMLAAEAGFGVL 453 (644)
Q Consensus 438 A~~sa~~lA~~l~~~l 453 (644)
+..=|..+.+.+.+.+
T Consensus 377 ~r~mAe~~~d~~~~~~ 392 (561)
T 3da1_A 377 YRKMAERTVDAVAQGL 392 (561)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc
Confidence 6666666666665544
No 40
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.47 E-value=1.1e-11 Score=137.06 Aligned_cols=216 Identities=15% Similarity=0.034 Sum_probs=113.4
Q ss_pred EEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccccccceEEEcCEEEEecCCCCc
Q 006466 207 YVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 286 (644)
Q Consensus 207 ~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~~~g~~i~a~~vV~A~G~~s~ 286 (644)
..++...+...|.+.+++.|++|+++++|+++..++ .+++|++.+. .+|+ ..+++||.||+|+|.++.
T Consensus 144 g~v~~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~--~~~~V~~~d~---~~G~-------~~~i~A~~VV~AtG~~s~ 211 (501)
T 2qcu_A 144 CWVDDARLVLANAQMVVRKGGEVLTRTRATSARREN--GLWIVEAEDI---DTGK-------KYSWQARGLVNATGPWVK 211 (501)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEECSEEEEEEEEET--TEEEEEEEET---TTCC-------EEEEEESCEEECCGGGHH
T ss_pred CEEcHHHHHHHHHHHHHHcCCEEEcCcEEEEEEEeC--CEEEEEEEEC---CCCC-------EEEEECCEEEECCChhHH
Confidence 347899999999999999999999999999998865 4667877430 1121 137999999999999863
Q ss_pred chHHHHHH-cCCCcccccCcccceeEEEEEEeecCCCCCCCcEEEEeccCCCCCCcceEEEEEeCCCeEEEEEEEcc---
Q 006466 287 LSEKLIKN-FKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVAL--- 362 (644)
Q Consensus 287 l~~~l~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~h~~g~~~~~~~~g~~~l~~~~~~~~~ig~~~~~--- 362 (644)
.+.+. ++... ..+-...-|...+ ++.. ....... .+ +..++ ...|++|..++.+.+|.....
T Consensus 212 ---~l~~~~l~~~~---~~~i~p~rG~~~~--~~~~-~~~~~~~-~~--~~~dg--~~~~~~P~~~g~~~iG~t~~~~~~ 277 (501)
T 2qcu_A 212 ---QFFDDGMHLPS---PYGIRLIKGSHIV--VPRV-HTQKQAY-IL--QNEDK--RIVFVIPWMDEFSIIGTTDVEYKG 277 (501)
T ss_dssp ---HHHHHHTCCCC---SSCBCCEEEEEEE--EECS-SSCSCEE-EE--ECTTS--CEEEEEEETTTEEEEECCCEECCS
T ss_pred ---HHHHHhccCCc---ccccccceeEEEE--ECCC-CCCceEE-Ee--ecCCC--CEEEEEEcCCCcEEEcCCCCCCCC
Confidence 34333 33221 0111111122212 2211 1111111 11 11122 236888988787777743211
Q ss_pred CCCCCCCCcHHHHHHh----h-cCC-cchhcccCCceee-e-cceeeecCCcccCCcccCCCeEE--EccCCcccCCCCC
Q 006466 363 NYHNPFLNPYEEFQKF----K-HHP-AIKPLLEGGTVVQ-Y-GARTLNEGGLQSIPYPVFPGGAI--IGCAAGFLNVPKI 432 (644)
Q Consensus 363 d~~~~~~~~~~~~~~~----~-~~p-~i~~~l~~~~~i~-~-~~~~i~~gg~~~~~~~~~~~v~L--iGDAA~~~~P~~g 432 (644)
+..++..++ +..+.+ . ..| .+. ..+.+. | |.|.+...+.....+...+.++. .++..+-+-...|
T Consensus 278 ~~~~~~~~~-~~~~~l~~~~~~~~p~~l~----~~~v~~~~aG~Rp~~~d~~p~~~~~~~~~~i~~~~~~~~~gl~~i~G 352 (501)
T 2qcu_A 278 DPKAVKIEE-SEINYLLNVYNTHFKKQLS----RDDIVWTYSGVRPLCDDESDSPQAITRDYTLDIHDENGKAPLLSVFG 352 (501)
T ss_dssp CGGGCCCCH-HHHHHHHHHHHHHBSSCCC----GGGCCEEEEEEECCBCCCCSSGGGSCCCCEEEEEEETTEEEEEEEEC
T ss_pred CcCCCCCCH-HHHHHHHHHHHHhcCCCCC----cccEEEEEEEEeeecCCCCCccccCcCceEEEecccCCCCCeEEEeC
Confidence 111222222 222222 1 123 221 112221 1 33333322221112233355655 5665454445566
Q ss_pred cchHHHHHHHHHHHHHHhccc
Q 006466 433 KGTHTAMKSGMLAAEAGFGVL 453 (644)
Q Consensus 433 ~G~~~A~~sa~~lA~~l~~~l 453 (644)
.|+.++-.-|..+++.+.+.+
T Consensus 353 g~~t~~~~~Ae~~~~~~~~~~ 373 (501)
T 2qcu_A 353 GKLTTYRKLAEHALEKLTPYY 373 (501)
T ss_dssp CCGGGHHHHHHHHHHHHGGGS
T ss_pred ccccchHHHHHHHHHHHHHhh
Confidence 688888777777777777654
No 41
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.45 E-value=1.6e-11 Score=135.63 Aligned_cols=62 Identities=16% Similarity=0.146 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccccccceEEEcCEEEEecCCCCcchH
Q 006466 212 SQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSE 289 (644)
Q Consensus 212 ~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~~~g~~i~a~~vV~A~G~~s~l~~ 289 (644)
..|.+.|.+.+++.|++|+++++|++|+.++ +++++|++.| |.++.||.||.+.+.....++
T Consensus 221 ~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~-~~~~gV~~~~---------------g~~~~ad~VV~~a~~~~~~~~ 282 (501)
T 4dgk_A 221 GALVQGMIKLFQDLGGEVVLNARVSHMETTG-NKIEAVHLED---------------GRRFLTQAVASNADVVHTYRD 282 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEET-TEEEEEEETT---------------SCEEECSCEEECCC-------
T ss_pred cchHHHHHHHHHHhCCceeeecceeEEEeeC-CeEEEEEecC---------------CcEEEcCEEEECCCHHHHHHH
Confidence 5788889999999999999999999999887 6788999987 789999999999887765443
No 42
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.44 E-value=7.7e-13 Score=137.40 Aligned_cols=158 Identities=22% Similarity=0.333 Sum_probs=104.2
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChH-----HHHHHhhhhhhcCCCeeee
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPR-----ALNELLPQWKQEEAPIRVP 180 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~-----~l~~l~~~~~~~~~~~~~~ 180 (644)
.++||+|||||++||++|+.|++. .+|++|+|||+.+.+|+.+..++.+... ...+++..++. +..
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~----~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~Gv---~~~-- 148 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTL----RPDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVGV---PYE-- 148 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHH----CTTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHTC---CCE--
T ss_pred CcCCEEEECccHHHHHHHHHHHhc----CCCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcCC---ccc--
Confidence 469999999999999999999985 2389999999998887644333222110 00112222111 100
Q ss_pred ccCCcEEEeccCCccccCCCCCCCCcEE--EcHHHHHHHHHHHHHh-cCCEEecCceEEEEEEcCC--------------
Q 006466 181 VSSDKFWFLTKDRAFSLPSPFSNRGNYV--ISLSQLVRWLGGKAEE-LGVEIYPGFAASEILYDAD-------------- 243 (644)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--v~r~~l~~~L~~~a~~-~Gv~i~~g~~v~~v~~~~~-------------- 243 (644)
..+.|. .+...+.+.|.+++.+ .|++++.++.|+++..+++
T Consensus 149 ----------------------~~G~~~~~~~~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~ 206 (344)
T 3jsk_A 149 ----------------------DEGDYVVVKHAALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAE 206 (344)
T ss_dssp ----------------------ECSSEEEESCHHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC--------------
T ss_pred ----------------------ccCCeEEEecHHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccc
Confidence 001222 1357788999999988 5999999999999988763
Q ss_pred --C--cEEEEEeCcCccccCCCcccccccceEEEcCEEEEecCCCCcchHHHHHHc
Q 006466 244 --N--KVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNF 295 (644)
Q Consensus 244 --g--~v~gV~~~d~g~~~~G~~~~~~~~g~~i~a~~vV~A~G~~s~l~~~l~~~~ 295 (644)
| +|.||.+...-+..+|..+... ++.+|+|++||+|||..+.+++.+.+++
T Consensus 207 ~~g~~rV~GVv~~~~~v~~~g~~~~~~-d~~~i~Ak~VV~ATG~~s~v~~~~~~~l 261 (344)
T 3jsk_A 207 DEAKVRIAGVVTNWTLVSMHHDDQSAM-DPNTINAPVIISTTGHDGPFGAFSVKRL 261 (344)
T ss_dssp --CCEEEEEEEEEEHHHHTTSSSSSCC-BCEEEECSEEEECCCSSSSSSCHHHHHH
T ss_pred cCCCceEeEEEeeeeeeeccCCccccc-CceEEEcCEEEECCCCCchhhHHHHHHH
Confidence 3 7888877532222233211111 2468999999999999999877776553
No 43
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.44 E-value=3.5e-12 Score=138.95 Aligned_cols=74 Identities=16% Similarity=0.244 Sum_probs=58.7
Q ss_pred cEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEc--------------CCCcEEEEEeCcCccccCCCcccccccceE
Q 006466 206 NYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYD--------------ADNKVIGIGTNDMGIAKDGSKKENFQRGVE 271 (644)
Q Consensus 206 ~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~--------------~~g~v~gV~~~d~g~~~~G~~~~~~~~g~~ 271 (644)
...++...+.+.|.+.+++.|++|+++++|+++..+ +++.+++|.+.+ | +
T Consensus 175 ~~~~~~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~---------------g-~ 238 (448)
T 3axb_A 175 AGFLDAEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSD---------------G-T 238 (448)
T ss_dssp EEECCHHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETT---------------S-C
T ss_pred CeEEcHHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCC---------------C-E
Confidence 345678899999999999999999999999999872 335677788765 4 5
Q ss_pred E--EcCEEEEecCCCCcchHHHHHHcCCC
Q 006466 272 L--RGRITLLAEGCRGSLSEKLIKNFKLR 298 (644)
Q Consensus 272 i--~a~~vV~A~G~~s~l~~~l~~~~~~~ 298 (644)
+ +||.||+|+|.++ ..+.+.+++.
T Consensus 239 i~~~Ad~VV~AtG~~s---~~l~~~~g~~ 264 (448)
T 3axb_A 239 RVEVGEKLVVAAGVWS---NRLLNPLGID 264 (448)
T ss_dssp EEEEEEEEEECCGGGH---HHHHGGGTCC
T ss_pred EeecCCEEEECCCcCH---HHHHHHcCCC
Confidence 8 9999999999885 3565555554
No 44
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.44 E-value=5.3e-12 Score=135.23 Aligned_cols=72 Identities=25% Similarity=0.290 Sum_probs=55.7
Q ss_pred cEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccccccceEEEcCEEEEecCCCC
Q 006466 206 NYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRG 285 (644)
Q Consensus 206 ~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~~~g~~i~a~~vV~A~G~~s 285 (644)
...++...+.+.|.+.+++.|++|+++++|+++..+++ .+ .|.+.+ | +++||.||+|+|.++
T Consensus 147 ~g~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~-~v-~v~t~~---------------g-~i~a~~VV~A~G~~s 208 (397)
T 2oln_A 147 GGTIDVRGTLAALFTLAQAAGATLRAGETVTELVPDAD-GV-SVTTDR---------------G-TYRAGKVVLACGPYT 208 (397)
T ss_dssp CEEEEHHHHHHHHHHHHHHTTCEEEESCCEEEEEEETT-EE-EEEESS---------------C-EEEEEEEEECCGGGH
T ss_pred CCEEcHHHHHHHHHHHHHHcCCEEECCCEEEEEEEcCC-eE-EEEECC---------------C-EEEcCEEEEcCCcCh
Confidence 34677888999999999999999999999999988764 34 466543 3 699999999999874
Q ss_pred cchHHHHHHcCCC
Q 006466 286 SLSEKLIKNFKLR 298 (644)
Q Consensus 286 ~l~~~l~~~~~~~ 298 (644)
..+.+.+++.
T Consensus 209 ---~~l~~~~g~~ 218 (397)
T 2oln_A 209 ---NDLLEPLGAR 218 (397)
T ss_dssp ---HHHHGGGTCC
T ss_pred ---HHHhhhcCCC
Confidence 2454455543
No 45
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.43 E-value=6.1e-13 Score=149.68 Aligned_cols=197 Identities=20% Similarity=0.167 Sum_probs=114.3
Q ss_pred cccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcc-cccCccCh---H---------HHHHHhhhhh
Q 006466 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHI-ISGNVFEP---R---------ALNELLPQWK 171 (644)
Q Consensus 105 ~~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~-~~g~~i~~---~---------~l~~l~~~~~ 171 (644)
..++||||||||+|||++|+.|++. |++|+||||.+.+|+.+ .+++.+.. . ....++.++.
T Consensus 124 ~~~~DVvVVGaG~aGl~aA~~la~~------G~~V~vlEk~~~~gg~s~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~ 197 (571)
T 1y0p_A 124 HDTVDVVVVGSGGAGFSAAISATDS------GAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKITDSPELMFEDTM 197 (571)
T ss_dssp SEECSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHC------CCcEEEEeCCCCCCCchhhcCceEEeCCCHHHHHhCCCCCHHHHHHHHH
Confidence 3468999999999999999999999 99999999999887654 33332210 0 0111111110
Q ss_pred hcCCCee------e--eccCCcEEEeccCCccccCC-----CCCCCCcEE-----EcHHHHHHHHHHHHHhcCCEEecCc
Q 006466 172 QEEAPIR------V--PVSSDKFWFLTKDRAFSLPS-----PFSNRGNYV-----ISLSQLVRWLGGKAEELGVEIYPGF 233 (644)
Q Consensus 172 ~~~~~~~------~--~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~-----v~r~~l~~~L~~~a~~~Gv~i~~g~ 233 (644)
....... . ....+.+.|+.. .++.+.. .......+. .....+.+.|.+.+++.||+|++++
T Consensus 198 ~~g~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~~~~~g~~~~r~~~~~~g~~~g~~l~~~L~~~~~~~gv~i~~~~ 276 (571)
T 1y0p_A 198 KGGQNINDPALVKVLSSHSKDSVDWMTA-MGADLTDVGMMGGASVNRAHRPTGGAGVGAHVVQVLYDNAVKRNIDLRMNT 276 (571)
T ss_dssp HHTTTCSCHHHHHHHHHHHHHHHHHHHH-TTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSE
T ss_pred HhcCCCCCHHHHHHHHHccHHHHHHHHh-cCCCCccCcccCCcCCCeeEecCCCCCCHHHHHHHHHHHHHhcCCEEEeCC
Confidence 0000000 0 000000011110 0111100 000000111 3457889999999999999999999
Q ss_pred eEEEEEEcCCCcEEEEEeCcCccccCCCcccccccceEEEcCEEEEecCCCCcchHHHHHHcCCCc---ccccCccccee
Q 006466 234 AASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLRE---KSHAQHQTYAL 310 (644)
Q Consensus 234 ~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~~~g~~i~a~~vV~A~G~~s~l~~~l~~~~~~~~---~~~~~~~~~~~ 310 (644)
+|++++.+++++|++|.+.+ .+|+ ..+++||.||+|+|.++..++ |.+.+.... .....+...|.
T Consensus 277 ~v~~l~~~~~g~v~Gv~~~~----~~g~-------~~~i~a~~VVlAtGg~~~n~~-~~~~~~p~~~~~~~~~~~~~tGd 344 (571)
T 1y0p_A 277 RGIEVLKDDKGTVKGILVKG----MYKG-------YYWVKADAVILATGGFAKNNE-RVAKLDPSLKGFISTNQPGAVGD 344 (571)
T ss_dssp EEEEEEECTTSCEEEEEEEE----TTTE-------EEEEECSEEEECCCCCTTCHH-HHHHHCGGGTTCCBCSCTTCSSH
T ss_pred EeeEeEEcCCCeEEEEEEEe----CCCc-------EEEEECCeEEEeCCCcccCHH-HHHHhCccccCCcccCCCCCchH
Confidence 99999987657888887753 1222 137999999999999998654 444443210 02234455666
Q ss_pred EEEEEEeecC
Q 006466 311 GIKEVWEIDE 320 (644)
Q Consensus 311 g~~~~~~~~~ 320 (644)
|+++.+.+..
T Consensus 345 g~~~a~~~Ga 354 (571)
T 1y0p_A 345 GLDVAENAGG 354 (571)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHcCC
Confidence 6665544433
No 46
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.43 E-value=9.5e-13 Score=147.91 Aligned_cols=197 Identities=19% Similarity=0.215 Sum_probs=116.0
Q ss_pred ccccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcc-cccCccCh---H---------HHHHHhhhh
Q 006466 104 ESMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHI-ISGNVFEP---R---------ALNELLPQW 170 (644)
Q Consensus 104 ~~~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~-~~g~~i~~---~---------~l~~l~~~~ 170 (644)
...++||||||||++||++|+.|++. |++|+||||.+.+++.+ .+++.+.. . ...+++.++
T Consensus 118 ~~~~~DVvVVG~G~aGl~aA~~la~~------G~~V~vlEk~~~~gg~s~~s~gg~~~~~~~~~~~~g~~ds~~~~~~~~ 191 (566)
T 1qo8_A 118 PSETTQVLVVGAGSAGFNASLAAKKA------GANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAHGVEDKVEWFIEDA 191 (566)
T ss_dssp CSEEEEEEEECCSHHHHHHHHHHHHH------TCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHH
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHC------CCcEEEEeCCCCCCCcccccCceeEccCCHHHHHhCCCCCHHHHHHHH
Confidence 34579999999999999999999999 99999999999887654 23433311 0 111111111
Q ss_pred hhcCCCee------e--eccCCcEEEeccC----------CccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecC
Q 006466 171 KQEEAPIR------V--PVSSDKFWFLTKD----------RAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPG 232 (644)
Q Consensus 171 ~~~~~~~~------~--~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g 232 (644)
........ . ....+.+.|+... ....++..... ....+....+.+.|.+.+++.||+|+++
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~g~~~~r~~~~-~~~~~~~~~l~~~L~~~~~~~gv~i~~~ 270 (566)
T 1qo8_A 192 MKGGRQQNDIKLVTILAEQSADGVQWLESLGANLDDLKRSGGARVDRTHRP-HGGKSSGPEIIDTLRKAAKEQGIDTRLN 270 (566)
T ss_dssp HHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEEC-SSSSCHHHHHHHHHHHHHHHTTCCEECS
T ss_pred HHhcCCCCCHHHHHHHHhccHHHHHHHHhcCCccccccccCCCCCCceeec-CCCCCCHHHHHHHHHHHHHhcCCEEEeC
Confidence 11000000 0 0000000111100 00011100000 0011357789999999999999999999
Q ss_pred ceEEEEEEcCCCcEEEEEeCcCccccCCCcccccccceEEEcCEEEEecCCCCcchHHHHHHcCCCc---ccccCcccce
Q 006466 233 FAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLRE---KSHAQHQTYA 309 (644)
Q Consensus 233 ~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~~~g~~i~a~~vV~A~G~~s~l~~~l~~~~~~~~---~~~~~~~~~~ 309 (644)
++|++++.+++++|++|++.+ .+|+ ..+++||.||+|+|.++.+++. .+++.... .....+...|
T Consensus 271 ~~v~~l~~~~~g~v~Gv~~~~----~~g~-------~~~i~A~~VVlAtGg~s~~~~~-~~~~~p~~~~~~~~~~~~~tG 338 (566)
T 1qo8_A 271 SRVVKLVVNDDHSVVGAVVHG----KHTG-------YYMIGAKSVVLATGGYGMNKEM-IAYYRPTMKDMTSSNNITATG 338 (566)
T ss_dssp EEEEEEEECTTSBEEEEEEEE----TTTE-------EEEEEEEEEEECCCCCTTCHHH-HHHHCGGGTTCEECSCTTCSC
T ss_pred CEEEEEEECCCCcEEEEEEEe----CCCc-------EEEEEcCEEEEecCCcccCHHH-HHHhCccccCCcccCCCCCCc
Confidence 999999887647888888753 1222 1369999999999999997554 44453211 0123445566
Q ss_pred eEEEEEEeec
Q 006466 310 LGIKEVWEID 319 (644)
Q Consensus 310 ~g~~~~~~~~ 319 (644)
.|+++.+.+.
T Consensus 339 dg~~~a~~~G 348 (566)
T 1qo8_A 339 DGVLMAKEIG 348 (566)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHcC
Confidence 6666554443
No 47
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.42 E-value=3.1e-12 Score=141.94 Aligned_cols=95 Identities=23% Similarity=0.248 Sum_probs=68.2
Q ss_pred HHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccccccceEEEcC-EEEEecCCCCcchHHH
Q 006466 213 QLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGR-ITLLAEGCRGSLSEKL 291 (644)
Q Consensus 213 ~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~~~g~~i~a~-~vV~A~G~~s~l~~~l 291 (644)
.+.+.|.+.+++.|++|+++++|++++.+++|+|++|.+.+ +|+ ..+|+|+ .||+|+|.++...+ |
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~-----~g~-------~~~i~A~k~VVlAtGG~~~n~~-m 269 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQ-----YGK-------EVAVRARRGVVLATGSFAYNDK-M 269 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEE-----TTE-------EEEEEEEEEEEECCCCCTTCHH-H
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEE-----CCc-------EEEEEeCCeEEEeCCChhhCHH-H
Confidence 78999999999999999999999999998668899998764 121 1469995 99999999998544 4
Q ss_pred HHHcCCCcc---cccCcccceeEEEEEEeecC
Q 006466 292 IKNFKLREK---SHAQHQTYALGIKEVWEIDE 320 (644)
Q Consensus 292 ~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~ 320 (644)
.+++..... ....+...|.|+++.+.+..
T Consensus 270 ~~~~~p~~~~~~~~~~~~~tGdGi~ma~~~Ga 301 (510)
T 4at0_A 270 IEAHAPRLIGRPGAAIEEHDGRSILMAQALGA 301 (510)
T ss_dssp HHHHCGGGTTCBCCSCTTCCCHHHHHHHTTTB
T ss_pred HHHhCccccCCCCCCCCCCCHHHHHHHHHhCc
Confidence 444432210 11234556777766555443
No 48
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.40 E-value=1.8e-12 Score=141.47 Aligned_cols=169 Identities=21% Similarity=0.287 Sum_probs=102.1
Q ss_pred cccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCccc-ccCcc----ChHHHHHHhhhhhhcCCCee-
Q 006466 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHII-SGNVF----EPRALNELLPQWKQEEAPIR- 178 (644)
Q Consensus 105 ~~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~-~g~~i----~~~~l~~l~~~~~~~~~~~~- 178 (644)
.+++||||||||++|+++|+.|++. |++|+||||.+.+|+.+. +|+.. +.....+++..+........
T Consensus 24 ~~~~dVvIIGgG~aGl~aA~~la~~------G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (447)
T 2i0z_A 24 AMHYDVIVIGGGPSGLMAAIGAAEE------GANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYS 97 (447)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHH
T ss_pred cCCCCEEEECCcHHHHHHHHHHHHC------CCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHH
Confidence 3569999999999999999999999 999999999988765431 22110 00011121111110000000
Q ss_pred ---eeccCCcEEEeccCCccccCCCCCCCCcEEE----cHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEe
Q 006466 179 ---VPVSSDKFWFLTKDRAFSLPSPFSNRGNYVI----SLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGT 251 (644)
Q Consensus 179 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v----~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~ 251 (644)
.....+.+.|+.. .++.+. . ...+... ....+.+.|.+.+++.||+|+++++|+++..++ +.+++|++
T Consensus 98 ~~~~~~~~~~~~~~~~-~G~~~~--~-~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~-~~v~~V~~ 172 (447)
T 2i0z_A 98 AFSIFNNEDIITFFEN-LGVKLK--E-EDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYEN-GQTKAVIL 172 (447)
T ss_dssp HHHHSCHHHHHHHHHH-TTCCEE--E-CGGGEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEET-TEEEEEEE
T ss_pred HHHhcCHHHHHHHHHh-cCCceE--E-eeCCEEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecC-CcEEEEEE
Confidence 0000000001100 000000 0 0012222 257889999999999999999999999998765 66778888
Q ss_pred CcCccccCCCcccccccceEEEcCEEEEecCCCCcch-------HHHHHHcCCCc
Q 006466 252 NDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLS-------EKLIKNFKLRE 299 (644)
Q Consensus 252 ~d~g~~~~G~~~~~~~~g~~i~a~~vV~A~G~~s~l~-------~~l~~~~~~~~ 299 (644)
.+ |.+++||.||+|+|.+|.-. ..+.+++|+..
T Consensus 173 ~~---------------G~~i~Ad~VVlAtGg~s~~~~g~tG~g~~la~~~G~~~ 212 (447)
T 2i0z_A 173 QT---------------GEVLETNHVVIAVGGKSVPQTGSTGDGYAWAEKAGHTI 212 (447)
T ss_dssp TT---------------CCEEECSCEEECCCCSSSGGGSCSSHHHHHHHHTTCCE
T ss_pred CC---------------CCEEECCEEEECCCCCcCCCCCCCcHHHHHHHHCCCCc
Confidence 65 55799999999999998311 24555667664
No 49
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.39 E-value=1.7e-12 Score=129.42 Aligned_cols=41 Identities=34% Similarity=0.499 Sum_probs=37.9
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcc
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHI 152 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~ 152 (644)
|.+||+|||||||||+||+.|+++ |++|+||||++.+|+.+
T Consensus 1 Mt~dV~IIGaGpaGL~aA~~La~~------G~~V~v~Ek~~~~GG~~ 41 (336)
T 3kkj_A 1 MTVPIAIIGTGIAGLSAAQALTAA------GHQVHLFDKSRGSGGRM 41 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSCGGG
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC------CCCEEEEECCCCCCCcc
Confidence 568999999999999999999999 99999999999998764
No 50
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.39 E-value=4.8e-12 Score=137.42 Aligned_cols=159 Identities=21% Similarity=0.280 Sum_probs=100.7
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCC-eEEEEcCCCCCCCccccc---CccC----h----------HHHHHHh
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGAEVGAHIISG---NVFE----P----------RALNELL 167 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~-~V~viEk~~~~g~~~~~g---~~i~----~----------~~l~~l~ 167 (644)
..+||||||||++|+++|+.|++. |+ +|+||||.+..++...+. ..+. . ....+-+
T Consensus 5 ~~~dVvIIGgG~aGlsaA~~La~~------G~~~V~vlE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 78 (438)
T 3dje_A 5 KSSSLLIVGAGTWGTSTALHLARR------GYTNVTVLDPYPVPSAISAGNDVNKVISSGQYSNNKDEIEVNEILAEEAF 78 (438)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHT------TCCCEEEEESSCSSCTTCTTCSSCEEECCCCSCCCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHHc------CCCcEEEEeCCCCCCCCccCCCCccEEEeccCCchhhhcchhHHHHHHHH
Confidence 468999999999999999999999 99 999999998765432211 0010 0 1111112
Q ss_pred hhhhhcC---C-----C-eeeecc---------------CCcE-EEeccCC-ccccCC-----------CCCCCCc-EEE
Q 006466 168 PQWKQEE---A-----P-IRVPVS---------------SDKF-WFLTKDR-AFSLPS-----------PFSNRGN-YVI 209 (644)
Q Consensus 168 ~~~~~~~---~-----~-~~~~~~---------------~~~~-~~~~~~~-~~~~~~-----------~~~~~~~-~~v 209 (644)
..|.... . . +..... .... .+++... ...+|. ....... ..+
T Consensus 79 ~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~p~~l~~~~~~g~~g~~~~~~~g~~ 158 (438)
T 3dje_A 79 NGWKNDPLFKPYYHDTGLLMSACSQEGLDRLGVRVRPGEDPNLVELTRPEQFRKLAPEGVLQGDFPGWKGYFARSGAGWA 158 (438)
T ss_dssp HHHHHCTTTGGGEECCCEEEEECSHHHHHHHHHHHCGGGCTTCEEECSHHHHHTTSCTTTSCSCCTTCEEEEESSSCEEE
T ss_pred HHHhhCccccCcEeccceEEEecCcchHHHHHHHHhhcccCCceecCCHHHHHHhCCcccccCCCCCceEEEeCCCCEEe
Confidence 2233211 0 0 000000 0011 1211100 000111 1111223 567
Q ss_pred cHHHHHHHHHHHHHhcCCEEecCc---eEEEEEEcCCCcEEEEEeCcCccccCCCcccccccceEEEcCEEEEecCCCCc
Q 006466 210 SLSQLVRWLGGKAEELGVEIYPGF---AASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 286 (644)
Q Consensus 210 ~r~~l~~~L~~~a~~~Gv~i~~g~---~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~~~g~~i~a~~vV~A~G~~s~ 286 (644)
+...+.+.|.+.+++.|++|++++ +|++|..++ +.+.+|++.+ |.+++||.||+|+|.++.
T Consensus 159 ~~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~-~~v~gV~t~~---------------G~~i~Ad~VV~AtG~~s~ 222 (438)
T 3dje_A 159 HARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFEN-NDVKGAVTAD---------------GKIWRAERTFLCAGASAG 222 (438)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEET-TEEEEEEETT---------------TEEEECSEEEECCGGGGG
T ss_pred cHHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecC-CeEEEEEECC---------------CCEEECCEEEECCCCChh
Confidence 788999999999999999999999 999998865 5677899876 668999999999999873
No 51
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.37 E-value=6.9e-12 Score=135.20 Aligned_cols=158 Identities=23% Similarity=0.317 Sum_probs=97.9
Q ss_pred cccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCccc-ccCc--------cChH--------HHHHHh
Q 006466 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHII-SGNV--------FEPR--------ALNELL 167 (644)
Q Consensus 105 ~~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~-~g~~--------i~~~--------~l~~l~ 167 (644)
...+||||||||+||+++|+.|++. |++|+||||.+.+|+... +|+. ..+. .+...+
T Consensus 25 ~~~~dViIIGgG~AGl~aA~~La~~------G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l 98 (417)
T 3v76_A 25 AEKQDVVIIGAGAAGMMCAIEAGKR------GRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSAL 98 (417)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHC------CCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHH
Confidence 3468999999999999999999999 999999999998775431 1111 0110 000000
Q ss_pred hhhhhcCCCeeeeccCCcEEEeccCCccccCCCCCCCCcE--EEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCc
Q 006466 168 PQWKQEEAPIRVPVSSDKFWFLTKDRAFSLPSPFSNRGNY--VISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNK 245 (644)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~ 245 (644)
..+... +...++. ..++.+ .....+.. ......+.+.|.+.+++.||+|+++++|+++..++++
T Consensus 99 ~~~~~~----------~~~~~~~-~~Gi~~--~~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~- 164 (417)
T 3v76_A 99 ARYRPQ----------DFVALVE-RHGIGW--HEKTLGQLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASG- 164 (417)
T ss_dssp HHSCHH----------HHHHHHH-HTTCCE--EECSTTEEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTE-
T ss_pred HhcCHH----------HHHHHHH-HcCCCc--EEeeCCEEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCE-
Confidence 000000 0000000 000000 00000111 1346788999999999999999999999999887643
Q ss_pred EEEEEeCcCccccCCCcccccccceEEEcCEEEEecCCCCcc-------hHHHHHHcCCCc
Q 006466 246 VIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSL-------SEKLIKNFKLRE 299 (644)
Q Consensus 246 v~gV~~~d~g~~~~G~~~~~~~~g~~i~a~~vV~A~G~~s~l-------~~~l~~~~~~~~ 299 (644)
+.|.+.+ | +++||.||+|+|.+|.- ...+.+.+|+..
T Consensus 165 -~~V~~~~---------------g-~i~ad~VIlAtG~~S~p~~gs~g~g~~la~~~G~~i 208 (417)
T 3v76_A 165 -FRVTTSA---------------G-TVDAASLVVASGGKSIPKMGATGLAYRIAEQFGLPV 208 (417)
T ss_dssp -EEEEETT---------------E-EEEESEEEECCCCSSCGGGTCCCHHHHHHHHTTCCE
T ss_pred -EEEEECC---------------c-EEEeeEEEECCCCccCCCCCCCcHHHHHHHHCCCCE
Confidence 4677765 5 79999999999999831 245666677663
No 52
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.37 E-value=4.9e-12 Score=129.35 Aligned_cols=146 Identities=23% Similarity=0.325 Sum_probs=96.0
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCccc-ccCccChH----HHHHHhhhhhhcCCCeeee
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHII-SGNVFEPR----ALNELLPQWKQEEAPIRVP 180 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~-~g~~i~~~----~l~~l~~~~~~~~~~~~~~ 180 (644)
.++||+|||||++|+++|+.|++. +|++|+||||.+.+++.+. ++..+..- ...+++..++ .+
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~-----~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G---~~---- 105 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKN-----PNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIG---VA---- 105 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTS-----TTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHT---CC----
T ss_pred cccCEEEECccHHHHHHHHHHHHc-----CCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcC---CC----
Confidence 468999999999999999999983 2899999999988765432 22222110 0011111111 00
Q ss_pred ccCCcEEEeccCCccccCCCCCCCCcEEE--cHHHHHHHHHHHHHh-cCCEEecCceEEEEEEcCCCcEEEEEeCcC---
Q 006466 181 VSSDKFWFLTKDRAFSLPSPFSNRGNYVI--SLSQLVRWLGGKAEE-LGVEIYPGFAASEILYDADNKVIGIGTNDM--- 254 (644)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~r~~l~~~L~~~a~~-~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~--- 254 (644)
+. ..+.+.+ +...+...|.+++.+ .|++++++++|+++..++ +.+.+|.+.+.
T Consensus 106 ----------------~~----~~~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~-~~v~gv~~~~~~~~ 164 (284)
T 1rp0_A 106 ----------------YD----EQDTYVVVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKG-NRVGGVVTNWALVA 164 (284)
T ss_dssp ----------------CE----ECSSEEEESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEET-TEEEEEEEEEHHHH
T ss_pred ----------------cc----cCCCEEEecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecC-CeEEEEEEeccccc
Confidence 00 0122333 677888889988876 699999999999998765 56777776420
Q ss_pred -cc--ccCCCcccccccceEEEcCEEEEecCCCCcchHHH
Q 006466 255 -GI--AKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKL 291 (644)
Q Consensus 255 -g~--~~~G~~~~~~~~g~~i~a~~vV~A~G~~s~l~~~l 291 (644)
.. ..+|+ ..++.||.||+|+|.+|.++...
T Consensus 165 ~~~~~g~~g~-------~~~i~ad~VV~AtG~~s~~~~~~ 197 (284)
T 1rp0_A 165 QNHHTQSCMD-------PNVMEAKIVVSSCGHDGPFGATG 197 (284)
T ss_dssp TCTTTSSCCC-------CEEEEEEEEEECCCSSSTTTTHH
T ss_pred cccCccccCc-------eEEEECCEEEECCCCchHHHHHH
Confidence 00 01122 26799999999999999876543
No 53
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.37 E-value=4.7e-12 Score=140.46 Aligned_cols=164 Identities=19% Similarity=0.345 Sum_probs=103.7
Q ss_pred cccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccc---------------------c------Cc
Q 006466 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIIS---------------------G------NV 157 (644)
Q Consensus 105 ~~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~---------------------g------~~ 157 (644)
.+.+|||||||||+|+++|+.|++. |++|+|||+++.++..... | +.
T Consensus 105 ~~~~DVVIVGgGpaGL~aA~~La~~------G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgk 178 (549)
T 3nlc_A 105 NLTERPIVIGFGPCGLFAGLVLAQM------GFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGK 178 (549)
T ss_dssp TCCCCCEEECCSHHHHHHHHHHHHT------TCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHC------CCeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCc
Confidence 3468999999999999999999999 9999999998765321100 0 00
Q ss_pred c-----ChH-HHHHHhhhhhhcCCCeeeeccCCcEEEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEec
Q 006466 158 F-----EPR-ALNELLPQWKQEEAPIRVPVSSDKFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYP 231 (644)
Q Consensus 158 i-----~~~-~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~ 231 (644)
+ .+. ...+++..|...+.+.. +... .. ..........+.+.|.+.+++.|++|++
T Consensus 179 l~~~i~~~~~~~~~v~~~~~~~G~~~~----------------i~~~--~~-p~~G~~~~~~l~~~L~~~l~~~Gv~I~~ 239 (549)
T 3nlc_A 179 LYSQVKDPNFYGRKVITEFVEAGAPEE----------------ILYV--SK-PHIGTFKLVTMIEKMRATIIELGGEIRF 239 (549)
T ss_dssp CCCCSCCTTCHHHHHHHHHHHTTCCGG----------------GGTB--SS-CCCCHHHHHHHHHHHHHHHHHTTCEEES
T ss_pred eEEEeccccccHHHHHHHHHHcCCCce----------------Eeec--cc-cccccchHHHHHHHHHHHHHhcCCEEEe
Confidence 0 000 00011111111000000 0000 00 0011124578888999999999999999
Q ss_pred CceEEEEEEcCCCcEEEEEeCcCccccCCCcccccccceEEEcCEEEEecCCCCcchHHHHHHcCCCcccccCcccceeE
Q 006466 232 GFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALG 311 (644)
Q Consensus 232 g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~~~g~~i~a~~vV~A~G~~s~l~~~l~~~~~~~~~~~~~~~~~~~g 311 (644)
+++|+++..++ +.+++|++.+ |.++.||.||+|+|.++.....+....++.. ....+.+|
T Consensus 240 ~t~V~~I~~~~-~~v~gV~l~~---------------G~~i~Ad~VVlA~G~~s~~~~~~l~~~Gi~~----~~~~~~vg 299 (549)
T 3nlc_A 240 STRVDDLHMED-GQITGVTLSN---------------GEEIKSRHVVLAVGHSARDTFEMLHERGVYM----EAKPFSVG 299 (549)
T ss_dssp SCCEEEEEESS-SBEEEEEETT---------------SCEEECSCEEECCCTTCHHHHHHHHHTTCCC----EECCEEEE
T ss_pred CCEEEEEEEeC-CEEEEEEECC---------------CCEEECCEEEECCCCChhhHHHHHHHcCCCc----ccceEEEE
Confidence 99999998876 5677898876 6789999999999999853334556667663 23334455
Q ss_pred EE
Q 006466 312 IK 313 (644)
Q Consensus 312 ~~ 313 (644)
++
T Consensus 300 Vr 301 (549)
T 3nlc_A 300 FR 301 (549)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 54
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=99.37 E-value=2.1e-11 Score=131.09 Aligned_cols=157 Identities=17% Similarity=0.160 Sum_probs=90.9
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcc-cccC-cc-ChH--------HHHHHhhhhhhcC
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHI-ISGN-VF-EPR--------ALNELLPQWKQEE 174 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~-~~g~-~i-~~~--------~l~~l~~~~~~~~ 174 (644)
..+||||||||++|+++|+.|++. .||++|+|||+....++.+ .+++ .+ .+. ...+-+..|....
T Consensus 35 ~~~dVvIIGaGi~Gls~A~~La~~----~pG~~V~vlE~~~~~~~~s~~~~g~~i~~~~~~~~~~~~l~~~~~~~~~~~~ 110 (405)
T 3c4n_A 35 EAFDIVVIGAGRMGAACAFYLRQL----APGRSLLLVEEGGLPNEEGATILAPGVWTAQDIPAGQEAQAEWTREQLLGAL 110 (405)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHH----CTTSCEEEECSSCSSCTTSHHHHCCCEECGGGCCTTCHHHHHHHHHHHHTGG
T ss_pred CcCCEEEECCcHHHHHHHHHHHhc----CCCCeEEEEeCCCCCCcchhccCCcceeecccCCchHHHHHHHHHHHHHHHh
Confidence 358999999999999999999987 3589999999986443322 2233 23 111 1111122232210
Q ss_pred CCe--eeeccCCcE-E---------EeccCC-ccccC---------C---CCCCCCcEEEcHHHHHHHHHHHHHhcCCEE
Q 006466 175 API--RVPVSSDKF-W---------FLTKDR-AFSLP---------S---PFSNRGNYVISLSQLVRWLGGKAEELGVEI 229 (644)
Q Consensus 175 ~~~--~~~~~~~~~-~---------~~~~~~-~~~~~---------~---~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i 229 (644)
.. ......... . +++... ...+| . .........++...+.+.|.+.+++.|+++
T Consensus 111 -~~~~~~~~~~~g~l~~~~~~~~~g~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~v~~~~l~~~L~~~~~~~Gv~i 189 (405)
T 3c4n_A 111 -GSGKTLEVEDRPLLHLLPAGEGSGLTPTLDALADFPEALALLDPARLPVARVDPRALTYRPGSLALLAAQQAIGQGAGL 189 (405)
T ss_dssp -GSSCCCCEEECCEEEEESSCCSSSCEEHHHHTTTCHHHHTTSCTTTSCEEEEETTCEEECHHHHHHHHHHHHHTTTCEE
T ss_pred -CCCCCCcEEeeCeEEehhhHhHCCCCCHHHHHHhCCCccccccCCcceEEEEcCCCEEEcHHHHHHHHHHHHHHCCCEE
Confidence 00 000000000 0 111000 00000 0 001122456788999999999999999999
Q ss_pred ecCceEE---------EEEEcCCCcEEEEEeCcCccccCCCcccccccceEEEcCEEEEecCCCC
Q 006466 230 YPGFAAS---------EILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRG 285 (644)
Q Consensus 230 ~~g~~v~---------~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~~~g~~i~a~~vV~A~G~~s 285 (644)
+++++|+ ++..++ +.+ +|.+.+ | +++||.||+|+|.++
T Consensus 190 ~~~~~v~~~~g~~~~~~i~~~~-~~v-~v~~~~---------------g-~i~a~~VV~A~G~~s 236 (405)
T 3c4n_A 190 LLNTRAELVPGGVRLHRLTVTN-THQ-IVVHET---------------R-QIRAGVIIVAAGAAG 236 (405)
T ss_dssp ECSCEEEEETTEEEEECBCC---------CBCC---------------E-EEEEEEEEECCGGGH
T ss_pred EcCCEEEeccccccccceEeeC-CeE-EEEECC---------------c-EEECCEEEECCCccH
Confidence 9999998 776654 344 566544 4 799999999999986
No 55
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.35 E-value=3.4e-12 Score=126.47 Aligned_cols=126 Identities=24% Similarity=0.273 Sum_probs=87.0
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCc
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDK 185 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~ 185 (644)
+++||+|||||++|+++|+.|++. |.+|+|||+.....+ ..+...+.......+++.+.
T Consensus 2 ~~~dVvVVGgG~aGl~aA~~la~~------g~~v~lie~~~~~~G-~~~~~~~~~~~~~~~~~~~~-------------- 60 (232)
T 2cul_A 2 AAYQVLIVGAGFSGAETAFWLAQK------GVRVGLLTQSLDAVM-MPFLPPKPPFPPGSLLERAY-------------- 60 (232)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHT------TCCEEEEESCGGGTT-CCSSCCCSCCCTTCHHHHHC--------------
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC------CCCEEEEecCCCcCC-cccCccccccchhhHHhhhc--------------
Confidence 368999999999999999999999 999999999843221 11100000000000000000
Q ss_pred EEEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhc-CCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCccc
Q 006466 186 FWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEEL-GVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKE 264 (644)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~-Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~ 264 (644)
+ ..+. ++..+.++|.+.+++. |++++ +++|+++..++ +.+++|.+.+
T Consensus 61 -----d-----------~~g~---~~~~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~~-~~v~~v~~~~----------- 108 (232)
T 2cul_A 61 -----D-----------PKDE---RVWAFHARAKYLLEGLRPLHLF-QATATGLLLEG-NRVVGVRTWE----------- 108 (232)
T ss_dssp -----C-----------TTCC---CHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEEET-TEEEEEEETT-----------
T ss_pred -----c-----------CCCC---CHHHHHHHHHHHHHcCCCcEEE-EeEEEEEEEeC-CEEEEEEECC-----------
Confidence 0 0011 6788999999999987 99998 56899998766 5677788765
Q ss_pred ccccceEEEcCEEEEecCCCCcch
Q 006466 265 NFQRGVELRGRITLLAEGCRGSLS 288 (644)
Q Consensus 265 ~~~~g~~i~a~~vV~A~G~~s~l~ 288 (644)
|.+++||.||+|+|.++..+
T Consensus 109 ----g~~i~a~~VV~A~G~~s~~~ 128 (232)
T 2cul_A 109 ----GPPARGEKVVLAVGSFLGAR 128 (232)
T ss_dssp ----SCCEECSEEEECCTTCSSCE
T ss_pred ----CCEEECCEEEECCCCChhhc
Confidence 56799999999999987543
No 56
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=99.34 E-value=1e-11 Score=128.32 Aligned_cols=158 Identities=22% Similarity=0.334 Sum_probs=100.8
Q ss_pred cccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChH-----HHHHHhhhhhhcCCCeee
Q 006466 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPR-----ALNELLPQWKQEEAPIRV 179 (644)
Q Consensus 105 ~~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~-----~l~~l~~~~~~~~~~~~~ 179 (644)
..++||+|||||++|+++|+.|++. .+|++|+|+|+.+.+|+....++.+... ...+++..++ .+..
T Consensus 63 ~~~~dv~IiG~G~aGl~aA~~la~~----~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~G---v~~~- 134 (326)
T 2gjc_A 63 FAVSDVIIVGAGSSGLSAAYVIAKN----RPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELE---IPYE- 134 (326)
T ss_dssp TTEESEEEECCSHHHHHHHHHHHHH----CTTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTT---CCCE-
T ss_pred cCcCCEEEECccHHHHHHHHHHHhc----CCCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhhC---cccc-
Confidence 3568999999999999999999986 3489999999999887644333222110 0011111111 0000
Q ss_pred eccCCcEEEeccCCccccCCCCCCCCcEEE--cHHHHHHHHHHHHHhc-CCEEecCceEEEEEEcC--C-C--cEEEEEe
Q 006466 180 PVSSDKFWFLTKDRAFSLPSPFSNRGNYVI--SLSQLVRWLGGKAEEL-GVEIYPGFAASEILYDA--D-N--KVIGIGT 251 (644)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~r~~l~~~L~~~a~~~-Gv~i~~g~~v~~v~~~~--~-g--~v~gV~~ 251 (644)
..+.+.+ +...+...|.+++.+. |++++.++.|+++..++ + | +|.||.+
T Consensus 135 -----------------------~~g~~~~~~~~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv 191 (326)
T 2gjc_A 135 -----------------------DEGDYVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVT 191 (326)
T ss_dssp -----------------------ECSSEEEESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEE
T ss_pred -----------------------cCCCeEEEcchHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEe
Confidence 0012222 4567788899988885 99999999999999875 3 5 8889987
Q ss_pred CcCccccCCCcccccccceEEEc---------------CEEEEecCCCCcchHHHHHH
Q 006466 252 NDMGIAKDGSKKENFQRGVELRG---------------RITLLAEGCRGSLSEKLIKN 294 (644)
Q Consensus 252 ~d~g~~~~G~~~~~~~~g~~i~a---------------~~vV~A~G~~s~l~~~l~~~ 294 (644)
....+..+|...... ++.+|.| |+||+|||..+.+...+.++
T Consensus 192 ~~~~v~~~g~~~~~~-d~~~I~A~G~~~~~~~~~~~~~~~VV~ATG~~~~~~~~~~~~ 248 (326)
T 2gjc_A 192 NWTLVTQAHGTQCCM-DPNVIELAGYKNDGTRDLSQKHGVILSTTGHDGPFGAFCAKR 248 (326)
T ss_dssp EEHHHHTC---CCCC-CCEEEEESCCCSSSCCCSSTTCCEEEECCCCC--CCSHHHHH
T ss_pred cceeecccccceecc-CceEEEEeeccccccccccccCCEEEECcCCCchHHHHHHhh
Confidence 532222333111111 2467999 99999999999887776554
No 57
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.33 E-value=2e-11 Score=130.98 Aligned_cols=157 Identities=20% Similarity=0.302 Sum_probs=97.1
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCccc-cc--Cc------cChH--------HHHHHhh
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHII-SG--NV------FEPR--------ALNELLP 168 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~-~g--~~------i~~~--------~l~~l~~ 168 (644)
.++||+|||||++|+++|+.|++. |.+|+||||.+.+|+... +| .+ ..+. .+...+.
T Consensus 3 ~~~dViIIGgG~aGl~aA~~la~~------G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~ 76 (401)
T 2gqf_A 3 QYSENIIIGAGAAGLFCAAQLAKL------GKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALA 76 (401)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHH
T ss_pred CCCCEEEECCcHHHHHHHHHHHhC------CCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHH
Confidence 368999999999999999999999 999999999987764321 11 11 0100 0000000
Q ss_pred hhhhcCCCeeeeccCCcEEEeccCCccccCCCCCCCCcEEE---cHHHHHHHHHHHHHhcCCEEecCceEEEEEEcC---
Q 006466 169 QWKQEEAPIRVPVSSDKFWFLTKDRAFSLPSPFSNRGNYVI---SLSQLVRWLGGKAEELGVEIYPGFAASEILYDA--- 242 (644)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v---~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~--- 242 (644)
.+.. .+.+.++. ..++.+. .... +... ....+.+.|.+.+++.||+|+++++|+++..++
T Consensus 77 ~~~~----------~~~~~~~~-~~Gi~~~--~~~~-g~~~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~ 142 (401)
T 2gqf_A 77 RYTN----------WDFISLVA-EQGITYH--EKEL-GQLFCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDE 142 (401)
T ss_dssp HSCH----------HHHHHHHH-HTTCCEE--ECST-TEEEETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCS
T ss_pred hCCH----------HHHHHHHH-hCCCceE--ECcC-CEEccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcC
Confidence 0000 00000000 0000000 0001 1111 567888999999999999999999999998762
Q ss_pred CCcEEEEEeCcCccccCCCcccccccceEEEcCEEEEecCCCCcc-------hHHHHHHcCCCc
Q 006466 243 DNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSL-------SEKLIKNFKLRE 299 (644)
Q Consensus 243 ~g~v~gV~~~d~g~~~~G~~~~~~~~g~~i~a~~vV~A~G~~s~l-------~~~l~~~~~~~~ 299 (644)
++.+ .|.+.+ | +++||.||+|+|.+|.- ...+.+++|+..
T Consensus 143 ~~~~-~v~~~~---------------g-~i~ad~VVlAtG~~s~p~~g~~G~g~~la~~~G~~i 189 (401)
T 2gqf_A 143 KVRF-VLQVNS---------------T-QWQCKNLIVATGGLSMPGLGATPFGYQIAEQFGIPV 189 (401)
T ss_dssp SCCE-EEEETT---------------E-EEEESEEEECCCCSSCGGGTCCSHHHHHHHHTTCCE
T ss_pred CCeE-EEEECC---------------C-EEECCEEEECCCCccCCCCCCChHHHHHHHHCCCCc
Confidence 2333 576654 4 79999999999999842 235666777764
No 58
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.33 E-value=1.4e-11 Score=138.43 Aligned_cols=196 Identities=19% Similarity=0.203 Sum_probs=113.7
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcc-cccCccC---h---------HHHHHHhhhhhh
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHI-ISGNVFE---P---------RALNELLPQWKQ 172 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~-~~g~~i~---~---------~~l~~l~~~~~~ 172 (644)
..+||||||+|++||++|+.|++. |.+|+||||.+.+++.+ .+++.+. . .....++.++..
T Consensus 125 ~~~~v~viG~G~aG~~aa~~~~~~------g~~v~~~e~~~~~~~~~~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~ 198 (572)
T 1d4d_A 125 ETTDVVIIGSGGAGLAAAVSARDA------GAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIEDKKQIMIDDTMK 198 (572)
T ss_dssp EECSEEEECCSHHHHHHHHHHHSS------SCCEEEECSSSSSCTTGGGCCSCEECCSSSTTGGGTCCCCTHHHHHHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC------CCcEEEEecCCCCCcchhhhCCeeEccCCHHHHHhCCCCCHHHHHHHHHH
Confidence 468999999999999999999999 99999999999887654 2333221 0 001111111111
Q ss_pred cCCCee------e--eccCCcEEEeccCCccccCC-----CCCCCCcE-----EEcHHHHHHHHHHHHHhcCCEEecCce
Q 006466 173 EEAPIR------V--PVSSDKFWFLTKDRAFSLPS-----PFSNRGNY-----VISLSQLVRWLGGKAEELGVEIYPGFA 234 (644)
Q Consensus 173 ~~~~~~------~--~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~-----~v~r~~l~~~L~~~a~~~Gv~i~~g~~ 234 (644)
...... . ....+.+.|+.. .++.+.. .......+ ......+.+.|.+.+++.||+|+++++
T Consensus 199 ~g~~~~~~~~v~~~~~~~~~~i~~l~~-~Gv~~~~~~~~gg~~~~r~~~~~~~~~~g~~l~~~L~~~~~~~gv~i~~~t~ 277 (572)
T 1d4d_A 199 GGRNINDPELVKVLANNSSDSIDWLTS-MGADMTDVGRMGGASVNRSHRPTGGAGVGAHVAQVLWDNAVKRGTDIRLNSR 277 (572)
T ss_dssp HTTTCSCHHHHHHHHHTHHHHHHHHHH-HTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEE
T ss_pred hcCCCCCHHHHHHHHHccHHHHHHHHh-cCCccccccccCCCcCCeeEecCCCCCCHHHHHHHHHHHHHHcCCeEEecCE
Confidence 000000 0 000000111110 0011100 00000011 124678899999999999999999999
Q ss_pred EEEEEEcCCCcEEEEEeCcCccccCCCcccccccceEEEcCEEEEecCCCCcchHHHHHHcCCCc---ccccCcccceeE
Q 006466 235 ASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLRE---KSHAQHQTYALG 311 (644)
Q Consensus 235 v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~~~g~~i~a~~vV~A~G~~s~l~~~l~~~~~~~~---~~~~~~~~~~~g 311 (644)
|++++.+++|+|++|.+.+ .+|+ ..++.||.||+|+|.++..+ +|.+.+.... .....+...|.|
T Consensus 278 v~~l~~~~~g~v~GV~~~~----~~G~-------~~~i~A~~VVlAtGg~~~~~-~~~~~~~p~~~~~~~~~~~~~tGdg 345 (572)
T 1d4d_A 278 VVRILEDASGKVTGVLVKG----EYTG-------YYVIKADAVVIAAGGFAKNN-ERVSKYDPKLKGFKATNHPGATGDG 345 (572)
T ss_dssp EEEEEEC--CCEEEEEEEE----TTTE-------EEEEECSEEEECCCCCTTCH-HHHHHHCGGGTTCCBSSCTTCSSHH
T ss_pred EEEEEECCCCeEEEEEEEe----CCCc-------EEEEEcCEEEEeCCCCccCH-HHHHHhCccccCCCccCCCCCccHH
Confidence 9999876547788888753 2232 14699999999999999865 4555554221 022345566777
Q ss_pred EEEEEeecC
Q 006466 312 IKEVWEIDE 320 (644)
Q Consensus 312 ~~~~~~~~~ 320 (644)
+++.+.+..
T Consensus 346 i~~a~~~Ga 354 (572)
T 1d4d_A 346 LDVALQAGA 354 (572)
T ss_dssp HHHHHHTTB
T ss_pred HHHHHHcCC
Confidence 765554443
No 59
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.30 E-value=1.1e-11 Score=130.12 Aligned_cols=129 Identities=18% Similarity=0.335 Sum_probs=90.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcE
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (644)
.+||+|||||++|+++|+.|++. |++|+|||+.+.+|+.+... |.. ..
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~------g~~v~vie~~~~~gg~~~~~--------------~~~----~~-------- 50 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRS------GLSYVILDAEASPGGAWQHA--------------WHS----LH-------- 50 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHS------SCCEEEECCSSSSSGGGGGS--------------CTT----CB--------
T ss_pred cCCEEEECcCHHHHHHHHHHHHC------CCCEEEEECCCCCCCcccCC--------------CCC----cE--------
Confidence 58999999999999999999999 99999999999887643210 000 00
Q ss_pred EEeccCCccccCC-CCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccc
Q 006466 187 WFLTKDRAFSLPS-PFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKEN 265 (644)
Q Consensus 187 ~~~~~~~~~~~~~-~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~ 265 (644)
.........++. ..........++..+.++|.+.+++.|++++++++|+++..++ +.+.+|.+.+
T Consensus 51 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~-~~~~~v~~~~------------ 116 (357)
T 4a9w_A 51 -LFSPAGWSSIPGWPMPASQGPYPARAEVLAYLAQYEQKYALPVLRPIRVQRVSHFG-ERLRVVARDG------------ 116 (357)
T ss_dssp -CSSCGGGSCCSSSCCCCCSSSSCBHHHHHHHHHHHHHHTTCCEECSCCEEEEEEET-TEEEEEETTS------------
T ss_pred -ecCchhhhhCCCCCCCCCccCCCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEECC-CcEEEEEeCC------------
Confidence 000000000110 0111122335688999999999999999999999999998876 3332277654
Q ss_pred cccceEEEcCEEEEecCCCC
Q 006466 266 FQRGVELRGRITLLAEGCRG 285 (644)
Q Consensus 266 ~~~g~~i~a~~vV~A~G~~s 285 (644)
| ++.+|.||+|+|.++
T Consensus 117 ---g-~~~~d~vV~AtG~~~ 132 (357)
T 4a9w_A 117 ---R-QWLARAVISATGTWG 132 (357)
T ss_dssp ---C-EEEEEEEEECCCSGG
T ss_pred ---C-EEEeCEEEECCCCCC
Confidence 4 799999999999765
No 60
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.30 E-value=8.6e-12 Score=139.57 Aligned_cols=149 Identities=16% Similarity=0.254 Sum_probs=94.6
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCC-CCCCcccc---cCccChHHHHHHhhhhhhcCCCeeeec
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA-EVGAHIIS---GNVFEPRALNELLPQWKQEEAPIRVPV 181 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~-~~g~~~~~---g~~i~~~~l~~l~~~~~~~~~~~~~~~ 181 (644)
.+|||||||||+||++||+.|++. |++|+|||+.. .+|. ..+ -+.+....+.+.+..+. .......
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~------G~kVlLIEk~~~~iG~-~~Cnps~ggia~~~lv~ei~alg---g~~~~~~ 96 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARM------GQQTLLLTHNIDTLGQ-MSCNPAIGGIGKGHLVKEVDALG---GLMAKAI 96 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESCGGGTTC-CSSSSEEESTTHHHHHHHHHHTT---CSHHHHH
T ss_pred CcCCEEEECChHHHHHHHHHHHhC------CCCEEEEeeccccccc-ccccccccchhhHHHHHHHHHhc---cHHHHHh
Confidence 369999999999999999999999 99999999985 3442 111 11122212211111111 1000000
Q ss_pred cCC--cEEEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHh-cCCEEecCceEEEEEEcCCCcEEEEEeCcCcccc
Q 006466 182 SSD--KFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEE-LGVEIYPGFAASEILYDADNKVIGIGTNDMGIAK 258 (644)
Q Consensus 182 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~-~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~ 258 (644)
+.. .+..+..... + ........+++..+.+.|.+.+++ .|++|+ +..|+++..++ +.|++|.+.+
T Consensus 97 d~~gi~f~~l~~~kg---p--av~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~-~~~V~~L~~e~-g~V~GV~t~d----- 164 (651)
T 3ces_A 97 DQAGIQFRILNASKG---P--AVRATRAQADRVLYRQAVRTALENQPNLMIF-QQAVEDLIVEN-DRVVGAVTQM----- 164 (651)
T ss_dssp HHHEEEEEEESTTSC---G--GGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEESS-SBEEEEEETT-----
T ss_pred hhcccchhhhhcccC---c--ccccchhhCCHHHHHHHHHHHHHhCCCCEEE-EEEEEEEEecC-CEEEEEEECC-----
Confidence 001 1112211110 0 000113468889999999999988 699995 56899998765 6788898876
Q ss_pred CCCcccccccceEEEcCEEEEecCCCCc
Q 006466 259 DGSKKENFQRGVELRGRITLLAEGCRGS 286 (644)
Q Consensus 259 ~G~~~~~~~~g~~i~a~~vV~A~G~~s~ 286 (644)
|.++.||.||+|||.++.
T Consensus 165 ----------G~~I~Ad~VVLATGt~s~ 182 (651)
T 3ces_A 165 ----------GLKFRAKAVVLTVGTFLD 182 (651)
T ss_dssp ----------SEEEEEEEEEECCSTTTC
T ss_pred ----------CCEEECCEEEEcCCCCcc
Confidence 678999999999999864
No 61
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.29 E-value=3.1e-10 Score=122.46 Aligned_cols=58 Identities=19% Similarity=0.196 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccccccceEEEcCEEEEecCCCCc
Q 006466 212 SQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 286 (644)
Q Consensus 212 ~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~~~g~~i~a~~vV~A~G~~s~ 286 (644)
..+.+.|.+.+++.|++|+++++|++|..++ +.+++|+++ |.++.||.||.|+|.+..
T Consensus 196 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~-~~~~gv~~~----------------g~~~~ad~VV~a~~~~~~ 253 (425)
T 3ka7_A 196 KGIIDALETVISANGGKIHTGQEVSKILIEN-GKAAGIIAD----------------DRIHDADLVISNLGHAAT 253 (425)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEET-TEEEEEEET----------------TEEEECSEEEECSCHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEECCceeEEEEEC-CEEEEEEEC----------------CEEEECCEEEECCCHHHH
Confidence 5678888999999999999999999999876 567778764 468999999999997653
No 62
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.28 E-value=1.1e-10 Score=127.49 Aligned_cols=47 Identities=38% Similarity=0.592 Sum_probs=37.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCccc
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHII 153 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~ 153 (644)
.+||+|||||++||+||+.|++...+..|+++|+|+|+++.+|+.+.
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~~~ 51 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKIQ 51 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTTCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCceEE
Confidence 58999999999999999999999100011299999999999987643
No 63
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.28 E-value=1.9e-11 Score=136.66 Aligned_cols=153 Identities=16% Similarity=0.249 Sum_probs=93.2
Q ss_pred ccccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCC-CCCCcccccCccChHHHHHHhhhhhhcCCCeeeecc
Q 006466 104 ESMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA-EVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVS 182 (644)
Q Consensus 104 ~~~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~-~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~ 182 (644)
+...|||||||||+||++||+.|++. |.+|+|||+.. .+|.. .+...+...+...++..+............
T Consensus 18 ~~~~yDVIVIGgG~AGl~AAlaLAr~------G~kVlLIEk~~~~iG~~-~c~ps~gGia~~~lv~el~al~g~~~~~~d 90 (641)
T 3cp8_A 18 GSHMYDVIVVGAGHAGCEAALAVARG------GLHCLLITSDLSAVARM-SCNPAIGGVAKGQITREIDALGGEMGKAID 90 (641)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESCGGGTTCC-SSCSEEECHHHHHHHHHHHHHTCSHHHHHH
T ss_pred ccCcCCEEEECccHHHHHHHHHHHHC------CCcEEEEEecccccCCC-ccccchhhhhHHHHHHHHHhcccHHHHHHH
Confidence 44579999999999999999999999 99999999985 34431 111100000111122111111110000000
Q ss_pred CCc--EEEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhc-CCEEecCceEEEEEEcCCCcEEEEEeCcCccccC
Q 006466 183 SDK--FWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEEL-GVEIYPGFAASEILYDADNKVIGIGTNDMGIAKD 259 (644)
Q Consensus 183 ~~~--~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~-Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~ 259 (644)
... +..+..... |. .....+.+++..+.+.|.+.+++. |++++.+ .|+++..++ +.|.+|.+.+
T Consensus 91 ~~gi~f~~l~~~kg---pa--v~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~~-~V~~L~~d~-g~V~GV~t~~------ 157 (641)
T 3cp8_A 91 ATGIQFRMLNRSKG---PA--MHSPRAQADKTQYSLYMRRIVEHEPNIDLLQD-TVIGVSANS-GKFSSVTVRS------ 157 (641)
T ss_dssp HHEEEEEEECSSSC---TT--TCEEEEEECHHHHHHHHHHHHHTCTTEEEEEC-CEEEEEEET-TEEEEEEETT------
T ss_pred hcCCchhhcccccC---cc--ccchhhhcCHHHHHHHHHHHHHhCCCCEEEee-EEEEEEecC-CEEEEEEECC------
Confidence 011 111211110 00 001134688999999999999884 8999654 899988765 6687888865
Q ss_pred CCcccccccceEEEcCEEEEecCCCC
Q 006466 260 GSKKENFQRGVELRGRITLLAEGCRG 285 (644)
Q Consensus 260 G~~~~~~~~g~~i~a~~vV~A~G~~s 285 (644)
|.++.||.||+|||.++
T Consensus 158 ---------G~~i~Ad~VVLATG~~s 174 (641)
T 3cp8_A 158 ---------GRAIQAKAAILACGTFL 174 (641)
T ss_dssp ---------SCEEEEEEEEECCTTCB
T ss_pred ---------CcEEEeCEEEECcCCCC
Confidence 66899999999999874
No 64
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.28 E-value=1.8e-11 Score=136.43 Aligned_cols=150 Identities=17% Similarity=0.242 Sum_probs=94.3
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCC-CCCCcc--cccCccChHHHHHHhhhhhhcCCCeeeecc
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA-EVGAHI--ISGNVFEPRALNELLPQWKQEEAPIRVPVS 182 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~-~~g~~~--~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~ 182 (644)
..|||||||||+||++||+.|++. |++|+|||+.. .+|... .+-+.+....+.+.+..+. .......+
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~------G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalg---g~~~~~~d 96 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARM------GAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALG---GEMGKAID 96 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHT------TCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHT---CSHHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC------CCCEEEEEecccccCCcCccccccccchHHHHHHHHHhh---hHHHHHhh
Confidence 369999999999999999999999 99999999985 444211 0111122212211111111 00000000
Q ss_pred CCc--EEEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHh-cCCEEecCceEEEEEEcCCCcEEEEEeCcCccccC
Q 006466 183 SDK--FWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEE-LGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKD 259 (644)
Q Consensus 183 ~~~--~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~-~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~ 259 (644)
... +..+....+..+ ....+.+++..+.+.|.+.+++ .|++|+ +..|+++..++ +.|++|.+.+
T Consensus 97 ~~gi~f~~l~~~kGpav-----~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~-~~~Vt~L~~e~-g~V~GV~t~d------ 163 (637)
T 2zxi_A 97 QTGIQFKMLNTRKGKAV-----QSPRAQADKKRYREYMKKVCENQENLYIK-QEEVVDIIVKN-NQVVGVRTNL------ 163 (637)
T ss_dssp HHEEEEEEESTTSCGGG-----CEEEEEECHHHHHHHHHHHHHTCTTEEEE-ESCEEEEEESS-SBEEEEEETT------
T ss_pred hcccceeecccccCccc-----cchhhhCCHHHHHHHHHHHHHhCCCCEEE-EeEEEEEEecC-CEEEEEEECC------
Confidence 011 111111110000 0113467889999999999988 599995 67899998765 6788898876
Q ss_pred CCcccccccceEEEcCEEEEecCCCCc
Q 006466 260 GSKKENFQRGVELRGRITLLAEGCRGS 286 (644)
Q Consensus 260 G~~~~~~~~g~~i~a~~vV~A~G~~s~ 286 (644)
|.++.||.||+|+|.++.
T Consensus 164 ---------G~~i~AdaVVLATG~~s~ 181 (637)
T 2zxi_A 164 ---------GVEYKTKAVVVTTGTFLN 181 (637)
T ss_dssp ---------SCEEECSEEEECCTTCBT
T ss_pred ---------CcEEEeCEEEEccCCCcc
Confidence 678999999999998753
No 65
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.27 E-value=2e-11 Score=129.24 Aligned_cols=62 Identities=21% Similarity=0.209 Sum_probs=52.2
Q ss_pred cEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccccccceEEEcCEEEEecCCCC
Q 006466 206 NYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRG 285 (644)
Q Consensus 206 ~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~~~g~~i~a~~vV~A~G~~s 285 (644)
...++...+.+.|.+.+++.|++|+++++|+++..++++ + .|++.+ | +++||.||+|+|.++
T Consensus 143 ~g~~~~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~-~-~v~~~~---------------g-~~~a~~vV~a~G~~s 204 (372)
T 2uzz_A 143 SGFLRSELAIKTWIQLAKEAGCAQLFNCPVTAIRHDDDG-V-TIETAD---------------G-EYQAKKAIVCAGTWV 204 (372)
T ss_dssp CEEEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSS-E-EEEESS---------------C-EEEEEEEEECCGGGG
T ss_pred CcEEcHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEcCCE-E-EEEECC---------------C-eEEcCEEEEcCCccH
Confidence 455778899999999999999999999999999887644 3 577654 4 599999999999886
No 66
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.26 E-value=4.6e-10 Score=121.12 Aligned_cols=55 Identities=20% Similarity=0.121 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccccccceEEEcCEEEEecCCCC
Q 006466 212 SQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRG 285 (644)
Q Consensus 212 ~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~~~g~~i~a~~vV~A~G~~s 285 (644)
..+.+.|.+.+++.|++|+++++|++|..++ +.+ |.+ + |.++.||.||.|+|.+.
T Consensus 189 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~-~~v--V~~-~---------------g~~~~ad~Vv~a~~~~~ 243 (421)
T 3nrn_A 189 KAVIDELERIIMENKGKILTRKEVVEINIEE-KKV--YTR-D---------------NEEYSFDVAISNVGVRE 243 (421)
T ss_dssp HHHHHHHHHHHHTTTCEEESSCCEEEEETTT-TEE--EET-T---------------CCEEECSEEEECSCHHH
T ss_pred HHHHHHHHHHHHHCCCEEEcCCeEEEEEEEC-CEE--EEe-C---------------CcEEEeCEEEECCCHHH
Confidence 4677888888999999999999999998765 444 543 3 46799999999999764
No 67
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.25 E-value=5.8e-11 Score=133.61 Aligned_cols=90 Identities=19% Similarity=0.258 Sum_probs=63.5
Q ss_pred HHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccccccceEEEcCEEEEecCCCCcchHH
Q 006466 211 LSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEK 290 (644)
Q Consensus 211 r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~~~g~~i~a~~vV~A~G~~s~l~~~ 290 (644)
...+.+.|.+++++.||+|++++.|++++.+++++|.+|.+.+. .+|+. ..+.||.||+|+|.++.+
T Consensus 142 g~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~---~~g~~-------~~i~A~~VVlAtGg~~~~--- 208 (588)
T 2wdq_A 142 GHALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCI---ETGEV-------VYFKARATVLATGGAGRI--- 208 (588)
T ss_dssp HHHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEET---TTCCE-------EEEEEEEEEECCCCCGGG---
T ss_pred HHHHHHHHHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEc---CCCeE-------EEEEcCEEEECCCCCccc---
Confidence 36788999999999999999999999999864578888876430 12321 469999999999999853
Q ss_pred HHHHcCCCcccccCcccceeEEEEEEeecC
Q 006466 291 LIKNFKLREKSHAQHQTYALGIKEVWEIDE 320 (644)
Q Consensus 291 l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 320 (644)
|.. ....+...|.|+.+.+.+..
T Consensus 209 ----y~~---~~~~~~~tGdG~~ma~~aGa 231 (588)
T 2wdq_A 209 ----YQS---TTNAHINTGDGVGMAIRAGV 231 (588)
T ss_dssp ----SSS---BSSCTTCCCHHHHHHHHTTC
T ss_pred ----cCC---cCCCCCchHHHHHHHHHcCC
Confidence 111 12334456666665554443
No 68
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=99.24 E-value=9.5e-11 Score=132.23 Aligned_cols=188 Identities=20% Similarity=0.220 Sum_probs=106.8
Q ss_pred ccccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCccc-c-cCc---cC---hHHHHHHhhh------
Q 006466 104 ESMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHII-S-GNV---FE---PRALNELLPQ------ 169 (644)
Q Consensus 104 ~~~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~-~-g~~---i~---~~~l~~l~~~------ 169 (644)
+..++||||||||+|||+||+.|++. |++|+||||....++++. + |+. +. .......+.+
T Consensus 15 ~~~~~DVvVVG~G~AGl~AAl~aa~~------G~~V~vlEK~~~~~g~s~~a~GGi~a~~~~~~~ds~~~~~~dtl~~g~ 88 (621)
T 2h88_A 15 VDHEFDAVVVGAGGAGLRAAFGLSEA------GFNTACVTKLFPTRSHTVAAQGGINAALGNMEDDNWRWHFYDTVKGSD 88 (621)
T ss_dssp EEEEEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHHHTT
T ss_pred ccccCCEEEECccHHHHHHHHHHHHC------CCcEEEEeccCCCCCCchhhCCCcEecCCCCCCCCHHHHHHHHHHhcC
Confidence 34579999999999999999999999 999999999876665542 2 221 11 1111111111
Q ss_pred ---------------------hhhcCCCeeeeccCCcEEEeccCCccccCCCC--CCCCc-EE--EcHHHHHHHHHHHHH
Q 006466 170 ---------------------WKQEEAPIRVPVSSDKFWFLTKDRAFSLPSPF--SNRGN-YV--ISLSQLVRWLGGKAE 223 (644)
Q Consensus 170 ---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~--v~r~~l~~~L~~~a~ 223 (644)
+...+.++...... .+. .....+...+... ..... +. .....+...|.+++.
T Consensus 89 ~l~d~~~v~~l~~~s~~~i~~L~~~Gv~f~~~~~g-~~~-~~~~gg~s~~~g~~~~~~R~~~~~d~tG~~l~~~L~~~~~ 166 (621)
T 2h88_A 89 WLGDQDAIHYMTEQAPAAVIELENYGMPFSRTEEG-KIY-QRAFGGQSLQFGKGGQAHRCCCVADRTGHSLLHTLYGRSL 166 (621)
T ss_dssp TCSCHHHHHHHHHHHHHHHHHHHHTTCCCCBCTTS-SBC-EECCTTCBSTTTTSCBCCCEECSTTCHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHcCCCcccCCCC-cee-ccccCcccccccCCCcceeEEEecCCCHHHHHHHHHHHHH
Confidence 00001111000000 000 0000000000000 00000 00 123578899999999
Q ss_pred hcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccccccceEEEcCEEEEecCCCCcchHHHHHHcCCCccccc
Q 006466 224 ELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHA 303 (644)
Q Consensus 224 ~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~~~g~~i~a~~vV~A~G~~s~l~~~l~~~~~~~~~~~~ 303 (644)
+.||+|+.++.|++++.++ |+|.||.+.+. .+|+. ..+.||.||+|+|.++.+- .. ...
T Consensus 167 ~~gv~i~~~~~v~~Li~~~-g~v~Gv~~~~~---~~G~~-------~~i~A~~VVlATGG~~~~y-------~~---~t~ 225 (621)
T 2h88_A 167 RYDTSYFVEYFALDLLMEN-GECRGVIALCI---EDGTI-------HRFRAKNTVIATGGYGRTY-------FS---CTS 225 (621)
T ss_dssp TSCCEEEETEEEEEEEEET-TEEEEEEEEET---TTCCE-------EEEEEEEEEECCCCCGGGS-------SS---BSS
T ss_pred hCCCEEEEceEEEEEEEEC-CEEEEEEEEEc---CCCcE-------EEEEcCeEEECCCcccccc-------CC---cCC
Confidence 9999999999999998864 78888876431 22321 4799999999999998641 11 123
Q ss_pred CcccceeEEEEEEeecC
Q 006466 304 QHQTYALGIKEVWEIDE 320 (644)
Q Consensus 304 ~~~~~~~g~~~~~~~~~ 320 (644)
.+...|.|+.+.+....
T Consensus 226 ~~~~tGdG~~mA~raGa 242 (621)
T 2h88_A 226 AHTSTGDGTAMVTRAGL 242 (621)
T ss_dssp CTTCCCHHHHHHHHTTC
T ss_pred CCCCChHHHHHHHHcCC
Confidence 34456666665555444
No 69
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.22 E-value=5.7e-11 Score=132.30 Aligned_cols=134 Identities=21% Similarity=0.282 Sum_probs=95.0
Q ss_pred ccccEEEECCCHHHHHHHHHHH-hhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCC-eeeeccC
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLK-QLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAP-IRVPVSS 183 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La-~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~-~~~~~~~ 183 (644)
+.+||||||||++|+++|+.|+ +. |++|+|||+.+.+|+.+. ....| ....+..
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~------G~~v~viE~~~~~GGtw~------------------~~~ypg~~~d~~s 62 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHEL------GLTTVGFDKADGPGGTWY------------------WNRYPGALSDTES 62 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTT------CCCEEEEESSSSSCTHHH------------------HCCCTTCEEEEEG
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcC------CCCEEEEECCCCCCCccc------------------ccCCCCceecCCc
Confidence 4689999999999999999999 87 999999999998886321 11010 0000000
Q ss_pred CcEEEeccCCccccCC---CCCCCCcEEEcHHHHHHHHHHHHHhcCC--EEecCceEEEEEEcCCCcEEEEEeCcCcccc
Q 006466 184 DKFWFLTKDRAFSLPS---PFSNRGNYVISLSQLVRWLGGKAEELGV--EIYPGFAASEILYDADNKVIGIGTNDMGIAK 258 (644)
Q Consensus 184 ~~~~~~~~~~~~~~~~---~~~~~~~~~v~r~~l~~~L~~~a~~~Gv--~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~ 258 (644)
. ...+.+.. ...........+.++.++|.+.+++.|+ +++++++|+++..++++..+.|++.+
T Consensus 63 ~-------~~~~~~~~~~~~~~~~~~~~~~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~----- 130 (540)
T 3gwf_A 63 H-------LYRFSFDRDLLQESTWKTTYITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDH----- 130 (540)
T ss_dssp G-------GSSCCSCHHHHHHCCCSBSEEEHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETT-----
T ss_pred c-------eeeeccccccccCCCCcccCCCHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcC-----
Confidence 0 00000000 0001123457889999999999999998 89999999999988765566788776
Q ss_pred CCCcccccccceEEEcCEEEEecCCCC
Q 006466 259 DGSKKENFQRGVELRGRITLLAEGCRG 285 (644)
Q Consensus 259 ~G~~~~~~~~g~~i~a~~vV~A~G~~s 285 (644)
|.++.+|.||+|+|.+|
T Consensus 131 ----------G~~i~ad~lV~AtG~~s 147 (540)
T 3gwf_A 131 ----------GEVYRAKYVVNAVGLLS 147 (540)
T ss_dssp ----------SCEEEEEEEEECCCSCC
T ss_pred ----------CCEEEeCEEEECCcccc
Confidence 67899999999999765
No 70
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.22 E-value=4.4e-11 Score=126.21 Aligned_cols=120 Identities=23% Similarity=0.332 Sum_probs=89.1
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCc
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDK 185 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~ 185 (644)
+.+||+|||||++|+++|+.|++. |++|+|||+.+.+|+.+. .+++. . .
T Consensus 13 ~~~dvvIIG~G~aGl~aA~~l~~~------g~~v~lie~~~~~gg~~~-----------~~~~~--------~------~ 61 (360)
T 3ab1_A 13 DMRDLTIIGGGPTGIFAAFQCGMN------NISCRIIESMPQLGGQLA-----------ALYPE--------K------H 61 (360)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSCHHHH-----------HTCTT--------S------E
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC------CCCEEEEecCCCCCCccc-----------ccCCC--------c------c
Confidence 468999999999999999999998 999999999988775321 00000 0 0
Q ss_pred EEEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccc
Q 006466 186 FWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKEN 265 (644)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~ 265 (644)
. ...+. ...+.+..+.+.|.+.+++.|++++++++|+++..++++.+ .|.+.+
T Consensus 62 --~------~~~~~------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~-~v~~~~------------ 114 (360)
T 3ab1_A 62 --I------YDVAG------FPEVPAIDLVESLWAQAERYNPDVVLNETVTKYTKLDDGTF-ETRTNT------------ 114 (360)
T ss_dssp --E------CCSTT------CSSEEHHHHHHHHHHHHHTTCCEEECSCCEEEEEECTTSCE-EEEETT------------
T ss_pred --c------ccCCC------CCCCCHHHHHHHHHHHHHHhCCEEEcCCEEEEEEECCCceE-EEEECC------------
Confidence 0 00010 00145788899999999999999999999999988764433 577655
Q ss_pred cccceEEEcCEEEEecCCCCc
Q 006466 266 FQRGVELRGRITLLAEGCRGS 286 (644)
Q Consensus 266 ~~~g~~i~a~~vV~A~G~~s~ 286 (644)
|.++.+|.||+|+|.++.
T Consensus 115 ---g~~~~~~~li~AtG~~~~ 132 (360)
T 3ab1_A 115 ---GNVYRSRAVLIAAGLGAF 132 (360)
T ss_dssp ---SCEEEEEEEEECCTTCSC
T ss_pred ---CcEEEeeEEEEccCCCcC
Confidence 567999999999999764
No 71
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=99.22 E-value=2.1e-10 Score=121.28 Aligned_cols=37 Identities=30% Similarity=0.445 Sum_probs=33.9
Q ss_pred cccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCC
Q 006466 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (644)
Q Consensus 105 ~~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~ 147 (644)
.+++||+|||||++|+++|+.|++. |++|+||||...
T Consensus 4 ~~~~dVvVIG~Gi~Gls~A~~La~~------G~~V~vle~~~~ 40 (363)
T 1c0p_A 4 HSQKRVVVLGSGVIGLSSALILARK------GYSVHILARDLP 40 (363)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSCT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhC------CCEEEEEeccCC
Confidence 3568999999999999999999999 999999999763
No 72
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.22 E-value=5.8e-11 Score=112.44 Aligned_cols=113 Identities=27% Similarity=0.389 Sum_probs=84.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcEE
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKFW 187 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 187 (644)
+||+|||||++|+.+|..|++. |.+|+|+|+.+..-... ..
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~------g~~v~lie~~~~~~~~~---~~------------------------------ 42 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARA------GLKVLVLDGGRSKVKGV---SR------------------------------ 42 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT------TCCEEEEECSCCTTTTC---SC------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHC------CCcEEEEeCCCCcccCc---hh------------------------------
Confidence 7999999999999999999999 99999999986321100 00
Q ss_pred EeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccccc
Q 006466 188 FLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQ 267 (644)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~~ 267 (644)
+. .+|.. ...+....+.+.|.+.+++.|++++++ +|+++..++++ +.|++.+
T Consensus 43 -~~-----~~~~~-----~~~~~~~~~~~~l~~~~~~~gv~v~~~-~v~~i~~~~~~--~~v~~~~-------------- 94 (180)
T 2ywl_A 43 -VP-----NYPGL-----LDEPSGEELLRRLEAHARRYGAEVRPG-VVKGVRDMGGV--FEVETEE-------------- 94 (180)
T ss_dssp -CC-----CSTTC-----TTCCCHHHHHHHHHHHHHHTTCEEEEC-CCCEEEECSSS--EEEECSS--------------
T ss_pred -hh-----ccCCC-----cCCCCHHHHHHHHHHHHHHcCCEEEeC-EEEEEEEcCCE--EEEEECC--------------
Confidence 00 00000 001345788899999999999999999 99999876644 3566655
Q ss_pred cceEEEcCEEEEecCCCCcchH
Q 006466 268 RGVELRGRITLLAEGCRGSLSE 289 (644)
Q Consensus 268 ~g~~i~a~~vV~A~G~~s~l~~ 289 (644)
| ++.+|.||+|+|.++.+.+
T Consensus 95 -g-~i~ad~vI~A~G~~~~~~~ 114 (180)
T 2ywl_A 95 -G-VEKAERLLLCTHKDPTLPS 114 (180)
T ss_dssp -C-EEEEEEEEECCTTCCHHHH
T ss_pred -C-EEEECEEEECCCCCCCccc
Confidence 5 7999999999999985544
No 73
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.20 E-value=1.2e-09 Score=117.93 Aligned_cols=40 Identities=35% Similarity=0.590 Sum_probs=37.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCccc
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHII 153 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~ 153 (644)
+||||||||++|++||+.|++. |++|+|||+++.+|+.+.
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~------G~~V~vlE~~~~~GG~~~ 41 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNA------GKKVLLLEGGERLGGRAY 41 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHT------TCCEEEECSSSSSBTTCC
T ss_pred CCEEEECCcHHHHHHHHHHHHc------CCeEEEEecCCCccCeec
Confidence 7999999999999999999999 999999999988888764
No 74
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.20 E-value=8.3e-11 Score=138.03 Aligned_cols=167 Identities=19% Similarity=0.228 Sum_probs=102.5
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCC-eEEEEcCCCCC--CC-cccccCccC----hHHH-------HHHhhhh
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGAEV--GA-HIISGNVFE----PRAL-------NELLPQW 170 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~-~V~viEk~~~~--g~-~~~~g~~i~----~~~l-------~~l~~~~ 170 (644)
+.+||||||||++|+++|+.|++. |. +|+||||.... ++ ...+++.+. ...+ .+++..+
T Consensus 3 ~~~dVvIIGgGi~Gls~A~~La~~------G~~~V~vlE~~~~~~~~gss~~~~G~~~~~~~~~~~~~l~~~s~~~~~~l 76 (830)
T 1pj5_A 3 STPRIVIIGAGIVGTNLADELVTR------GWNNITVLDQGPLNMPGGSTSHAPGLVFQTNPSKTMASFAKYTVEKLLSL 76 (830)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHT------TCCCEEEECSSCTTCCCSGGGTCCCEECCCCSCHHHHHHHHHHHHHHHHC
T ss_pred CCCCEEEECcCHHHHHHHHHHHhC------CCCcEEEEeCCCCCCCcccceeCCceeecCCCCHHHHHHHHHHHHHHHHH
Confidence 358999999999999999999999 98 99999998753 22 222223321 1111 1222222
Q ss_pred hhcCCCe-------eeeccC-----------------CcEEEeccCCcc-ccCCC--------CCCCCcEEEcHHHHHHH
Q 006466 171 KQEEAPI-------RVPVSS-----------------DKFWFLTKDRAF-SLPSP--------FSNRGNYVISLSQLVRW 217 (644)
Q Consensus 171 ~~~~~~~-------~~~~~~-----------------~~~~~~~~~~~~-~~~~~--------~~~~~~~~v~r~~l~~~ 217 (644)
....... ....+. ..+.+++..... .+|.. ........++...+...
T Consensus 77 ~~~~~~~~~~~G~l~~~~~~~~~~~l~~~~~~~~~~G~~~~~l~~~e~~~~~p~l~~~~~~gg~~~~~~g~v~p~~l~~~ 156 (830)
T 1pj5_A 77 TEDGVSCFNQVGGLEVATTETRLADLKRKLGYAAAWGIEGRLLSPAECQELYPLLDGENILGGLHVPSDGLASAARAVQL 156 (830)
T ss_dssp EETTEESEECCCEEEEESSHHHHHHHHHHHHHHHHHTCCCEEECHHHHHHHCTTSCGGGCCEEEEETTCEEECHHHHHHH
T ss_pred HhhCCCCeeecCcEEEEeCHHHHHHHHHHHHHHHHcCCCeEEECHHHHHHhCccCCccceEEEEEECCCceEcHHHHHHH
Confidence 1100000 000000 001111110000 01110 11123456788999999
Q ss_pred HHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccccccceEEEcCEEEEecCCCCcchHHHHHHcCC
Q 006466 218 LGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKL 297 (644)
Q Consensus 218 L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~~~g~~i~a~~vV~A~G~~s~l~~~l~~~~~~ 297 (644)
|.+.+++.|++|+.+++|+++..++ +.+++|.+.+ | +++||.||+|+|.++ ..+.+.+++
T Consensus 157 L~~~a~~~Gv~i~~~t~V~~i~~~~-~~v~~V~t~~---------------G-~i~Ad~VV~AaG~~s---~~l~~~~g~ 216 (830)
T 1pj5_A 157 LIKRTESAGVTYRGSTTVTGIEQSG-GRVTGVQTAD---------------G-VIPADIVVSCAGFWG---AKIGAMIGM 216 (830)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEEET-TEEEEEEETT---------------E-EEECSEEEECCGGGH---HHHHHTTTC
T ss_pred HHHHHHHcCCEEECCceEEEEEEeC-CEEEEEEECC---------------c-EEECCEEEECCccch---HHHHHHhCC
Confidence 9999999999999999999998865 5677788765 4 799999999999986 345555565
Q ss_pred C
Q 006466 298 R 298 (644)
Q Consensus 298 ~ 298 (644)
.
T Consensus 217 ~ 217 (830)
T 1pj5_A 217 A 217 (830)
T ss_dssp C
T ss_pred C
Confidence 4
No 75
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.19 E-value=2.8e-09 Score=119.57 Aligned_cols=75 Identities=19% Similarity=0.223 Sum_probs=57.0
Q ss_pred EEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccccccceEEEcCEEEEecCCCCcc
Q 006466 208 VISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSL 287 (644)
Q Consensus 208 ~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~~~g~~i~a~~vV~A~G~~s~l 287 (644)
.++...+...|.+.+++.|++|+++++|+++..++ +.|++|++.|. .+|+ +.+++||.||.|+|.++
T Consensus 184 ~v~~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~-~~v~gV~~~d~---~tg~-------~~~i~A~~VV~AaG~ws-- 250 (571)
T 2rgh_A 184 RNNDARLVIDNIKKAAEDGAYLVSKMKAVGFLYEG-DQIVGVKARDL---LTDE-------VIEIKAKLVINTSGPWV-- 250 (571)
T ss_dssp ECCHHHHHHHHHHHHHHTTCEEESSEEEEEEEEET-TEEEEEEEEET---TTCC-------EEEEEBSCEEECCGGGH--
T ss_pred eEchHHHHHHHHHHHHHcCCeEEeccEEEEEEEeC-CEEEEEEEEEc---CCCC-------EEEEEcCEEEECCChhH--
Confidence 35678899999999999999999999999998876 57778886531 1121 34799999999999885
Q ss_pred hHHHHHHcC
Q 006466 288 SEKLIKNFK 296 (644)
Q Consensus 288 ~~~l~~~~~ 296 (644)
..+.+..+
T Consensus 251 -~~l~~~~g 258 (571)
T 2rgh_A 251 -DKVRNLNF 258 (571)
T ss_dssp -HHHHTTCC
T ss_pred -HHHHHhhc
Confidence 34444444
No 76
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.19 E-value=6.4e-11 Score=122.07 Aligned_cols=115 Identities=17% Similarity=0.158 Sum_probs=75.5
Q ss_pred cccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCC
Q 006466 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSD 184 (644)
Q Consensus 105 ~~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~ 184 (644)
+..|||+||||||||++||+.|+|+ |++|+|||+.. .|+.... -++
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar~------g~~v~lie~~~-~gg~~~~-----------~~~---------------- 49 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGRA------RKQIALFDNNT-NRNRVTQ-----------NSH---------------- 49 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHT------TCCEEEEECSC-CGGGGSS-----------CBC----------------
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHC------CCCEEEEeCCC-CCCeeee-----------ecC----------------
Confidence 3469999999999999999999999 99999999874 3331100 000
Q ss_pred cEEEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCccc
Q 006466 185 KFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKE 264 (644)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~ 264 (644)
.++.. -.+...++.+.+.+++.+.+...+....++.+...+++.. .|.+.+
T Consensus 50 -----------~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~----------- 100 (304)
T 4fk1_A 50 -----------GFITR------DGIKPEEFKEIGLNEVMKYPSVHYYEKTVVMITKQSTGLF-EIVTKD----------- 100 (304)
T ss_dssp -----------CSTTC------TTBCHHHHHHHHHHHHTTSTTEEEEECCEEEEEECTTSCE-EEEETT-----------
T ss_pred -----------CccCC------CCCCHHHHHHHHHHHHHhcCCEEEEeeEEEEeeecCCCcE-EEEECC-----------
Confidence 00000 0133456666667777776644444445666666554543 466655
Q ss_pred ccccceEEEcCEEEEecCCCCc
Q 006466 265 NFQRGVELRGRITLLAEGCRGS 286 (644)
Q Consensus 265 ~~~~g~~i~a~~vV~A~G~~s~ 286 (644)
|.++.+|.||+|+|+++.
T Consensus 101 ----g~~~~a~~liiATGs~p~ 118 (304)
T 4fk1_A 101 ----HTKYLAERVLLATGMQEE 118 (304)
T ss_dssp ----CCEEEEEEEEECCCCEEE
T ss_pred ----CCEEEeCEEEEccCCccc
Confidence 678999999999998653
No 77
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=99.18 E-value=1.7e-10 Score=131.00 Aligned_cols=171 Identities=12% Similarity=0.142 Sum_probs=98.2
Q ss_pred cccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccC--cc----ChHHHHHH------------
Q 006466 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGN--VF----EPRALNEL------------ 166 (644)
Q Consensus 105 ~~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~--~i----~~~~l~~l------------ 166 (644)
..++||||||||+|||+||+.|++...+.+||++|+||||....++++.+.+ .+ ........
T Consensus 20 ~~~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~~~s~s~AqG~~gi~a~l~~ds~e~~~~~~~~~~~gl~ 99 (662)
T 3gyx_A 20 EHSVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASLERSGAVAQGLSAINTYLGDNNADDYVRMVRTDLMGLV 99 (662)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCTTTCSTTTTCEEEECCCCTTSCHHHHHHHHHHHTTTCC
T ss_pred eEEcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCCCCCcccccCcchheeecCCCCHHHHHHHHHHhcCCCc
Confidence 3579999999999999999999984111123899999999876555443322 11 11010010
Q ss_pred ---------------hhhhhhcCCCeeeeccCCcEEEeccCCcccc-----CCC-CCCCC--cEEEcHHHHHHHHHHHHH
Q 006466 167 ---------------LPQWKQEEAPIRVPVSSDKFWFLTKDRAFSL-----PSP-FSNRG--NYVISLSQLVRWLGGKAE 223 (644)
Q Consensus 167 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~--~~~v~r~~l~~~L~~~a~ 223 (644)
+..+...+.++.... .+...+.. .....+ ... ....+ ...+....+.+.|.++++
T Consensus 100 d~~~v~~l~~~a~~~i~~L~~~Gv~f~~~~-~~G~~~~g-~~~~~fg~~~~~gg~~~~r~~~~~~~~G~~i~~~L~~~a~ 177 (662)
T 3gyx_A 100 REDLIYDLGRHVDDSVHLFEEWGLPVWIKD-EHGHNLDG-AQAKAAGKSLRNGDKPVRSGRWQIMINGESYKVIVAEAAK 177 (662)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTCCBCEEC-SSSCEECH-HHHHHHTCCTTTTCCBCCSSTTCEEEEETSHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHcCCCceecC-CCCccccc-hhhhccccccccCccccccceecccCCHHHHHHHHHHHHH
Confidence 011111111211100 00000000 000000 000 00001 123445677888999998
Q ss_pred hc--CCEEecCceEEEEEEcCC--CcEEEEEeCcCccccCCCcccccccceEEEcCEEEEecCCCCcc
Q 006466 224 EL--GVEIYPGFAASEILYDAD--NKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSL 287 (644)
Q Consensus 224 ~~--Gv~i~~g~~v~~v~~~~~--g~v~gV~~~d~g~~~~G~~~~~~~~g~~i~a~~vV~A~G~~s~l 287 (644)
+. ||+|+.++.|++++.+++ |+|.||...+. ++|+ ...+.|+.||+|||+.+.+
T Consensus 178 ~~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~---~~g~-------~~~i~Ak~VVLATGG~g~~ 235 (662)
T 3gyx_A 178 NALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNL---RANE-------VHIFKANAMVVACGGAVNV 235 (662)
T ss_dssp HHHCTTTEECSEEECCCEECSSSTTBEEEEEEEES---SSSC-------EEEEECSEEEECCCCBCSS
T ss_pred hcCCCcEEEEceEEEEEEEeCCccceEEEEEEEEc---CCCc-------EEEEEeCEEEECCCccccc
Confidence 87 999999999999998775 48989876431 2333 2579999999999999853
No 78
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.18 E-value=1.6e-10 Score=126.75 Aligned_cols=55 Identities=15% Similarity=0.124 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccccccceEEEcCEEEEecCCC
Q 006466 213 QLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCR 284 (644)
Q Consensus 213 ~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~~~g~~i~a~~vV~A~G~~ 284 (644)
.|.+.|.+.+++.|++|+++++|++|..++++ ++.|.+. +.++.||.||.|.+..
T Consensus 235 ~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~-~~~v~~~----------------~~~~~ad~vv~a~p~~ 289 (477)
T 3nks_A 235 MLPQALETHLTSRGVSVLRGQPVCGLSLQAEG-RWKVSLR----------------DSSLEADHVISAIPAS 289 (477)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCCCEEEECGGG-CEEEECS----------------SCEEEESEEEECSCHH
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCc-eEEEEEC----------------CeEEEcCEEEECCCHH
Confidence 57888888888899999999999999887644 3457653 3479999999999864
No 79
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=99.18 E-value=7.7e-10 Score=121.34 Aligned_cols=42 Identities=26% Similarity=0.461 Sum_probs=37.6
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCccc
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHII 153 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~ 153 (644)
..+||+|||||++||++|+.|++. |++|+|+|+.+.+|+.+.
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~~------g~~v~v~E~~~~~GGr~~ 56 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRSR------GTDAVLLESSARLGGAVG 56 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHTT------TCCEEEECSSSSSBTTCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHC------CCCEEEEEcCCCCCceee
Confidence 368999999999999999999999 999999999999988653
No 80
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.17 E-value=8.7e-11 Score=122.47 Aligned_cols=119 Identities=24% Similarity=0.301 Sum_probs=87.4
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCc
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDK 185 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~ 185 (644)
+.+||+|||||+||+++|+.|++. |++|+|||+.+.+|+.+. ..++. ..
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~------g~~v~lie~~~~~gg~~~-----------~~~~~--------------~~ 52 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGMR------GLSFRFVDPLPEPGGQLT-----------ALYPE--------------KY 52 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESSSSSCHHHH-----------HTCTT--------------SE
T ss_pred CcCcEEEECCCHHHHHHHHHHHhC------CCCEEEEeCCCCCCCeee-----------ccCCC--------------ce
Confidence 368999999999999999999998 999999999988775321 00000 00
Q ss_pred EEEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccc
Q 006466 186 FWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKEN 265 (644)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~ 265 (644)
+ . ..+. ...+.+..+.+.|.+.+++.+++++++++|+++..+++ .+.|.+.+
T Consensus 53 ~--~------~~~~------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~--~~~v~~~~------------ 104 (335)
T 2zbw_A 53 I--Y------DVAG------FPKVYAKDLVKGLVEQVAPFNPVYSLGERAETLEREGD--LFKVTTSQ------------ 104 (335)
T ss_dssp E--C------CSTT------CSSEEHHHHHHHHHHHHGGGCCEEEESCCEEEEEEETT--EEEEEETT------------
T ss_pred e--e------ccCC------CCCCCHHHHHHHHHHHHHHcCCEEEeCCEEEEEEECCC--EEEEEECC------------
Confidence 0 0 0010 00145678888999999889999999999999987653 33566654
Q ss_pred cccceEEEcCEEEEecCCCCc
Q 006466 266 FQRGVELRGRITLLAEGCRGS 286 (644)
Q Consensus 266 ~~~g~~i~a~~vV~A~G~~s~ 286 (644)
|.++.+|.||+|+|.++.
T Consensus 105 ---g~~~~~~~lv~AtG~~~~ 122 (335)
T 2zbw_A 105 ---GNAYTAKAVIIAAGVGAF 122 (335)
T ss_dssp ---SCEEEEEEEEECCTTSEE
T ss_pred ---CCEEEeCEEEECCCCCCC
Confidence 567999999999998753
No 81
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.17 E-value=1.4e-10 Score=129.48 Aligned_cols=134 Identities=25% Similarity=0.345 Sum_probs=93.6
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCC-eeeeccCC
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAP-IRVPVSSD 184 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~-~~~~~~~~ 184 (644)
+.+||||||||++|+++|+.|++. |++|+|||+++.+|+.+. ....| ....+...
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~~------G~~v~iiE~~~~~GGtw~------------------~~~ypg~~~dv~s~ 75 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRSQ------GLTVRAFEAASGVGGVWY------------------WNRYPGARCDVESI 75 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSCTHHH------------------HCCCTTCBCSSCTT
T ss_pred CCCCEEEECchHHHHHHHHHHHhC------CCCEEEEeCCCCCCCccc------------------cCCCCCceeCCCch
Confidence 468999999999999999999998 999999999998886431 11000 00000000
Q ss_pred cEEEeccCCccccCC---CCCCCCcEEEcHHHHHHHHHHHHHhcCC--EEecCceEEEEEEcCCCcEEEEEeCcCccccC
Q 006466 185 KFWFLTKDRAFSLPS---PFSNRGNYVISLSQLVRWLGGKAEELGV--EIYPGFAASEILYDADNKVIGIGTNDMGIAKD 259 (644)
Q Consensus 185 ~~~~~~~~~~~~~~~---~~~~~~~~~v~r~~l~~~L~~~a~~~Gv--~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~ 259 (644)
.+. +.+.. ...........+.++.++|.+.+++.|+ +++++++|+++..++++..+.|++.+
T Consensus 76 ~y~-------~~f~~~~~~~~~~~~~~~~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~------ 142 (549)
T 4ap3_A 76 DYS-------YSFSPELEQEWNWSEKYATQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDR------ 142 (549)
T ss_dssp TSS-------CCSCHHHHHHCCCSSSSCBHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETT------
T ss_pred hcc-------cccccccccCCCCccCCCCHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECC------
Confidence 000 00000 0001112235778999999999999997 79999999999988766667788876
Q ss_pred CCcccccccceEEEcCEEEEecCCCC
Q 006466 260 GSKKENFQRGVELRGRITLLAEGCRG 285 (644)
Q Consensus 260 G~~~~~~~~g~~i~a~~vV~A~G~~s 285 (644)
|.+++||.||+|+|..+
T Consensus 143 ---------G~~i~ad~lV~AtG~~s 159 (549)
T 4ap3_A 143 ---------GDEVSARFLVVAAGPLS 159 (549)
T ss_dssp ---------CCEEEEEEEEECCCSEE
T ss_pred ---------CCEEEeCEEEECcCCCC
Confidence 67899999999999654
No 82
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.17 E-value=1.8e-10 Score=128.67 Aligned_cols=139 Identities=24% Similarity=0.300 Sum_probs=91.6
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCc
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDK 185 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~ 185 (644)
..+||||||||++|+++|+.|++. |++|+|||+++.+|+.+... . +|.... ........
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~------G~~v~iiE~~~~~GG~w~~~-~---------~pg~~~-----d~~~~~~~ 73 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLREL------GRSVHVIETAGDVGGVWYWN-R---------YPGARC-----DIESIEYC 73 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSCTHHHHC-C---------CTTCBC-----SSCTTTSS
T ss_pred CCCCEEEECccHHHHHHHHHHHhC------CCCEEEEeCCCCCCCccccc-C---------CCceee-----cccccccc
Confidence 368999999999999999999999 99999999999888743210 0 000000 00000000
Q ss_pred EEEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcC--CEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcc
Q 006466 186 FWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELG--VEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKK 263 (644)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~G--v~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~ 263 (644)
+.+.. .....+ ........+.++.++|...+++.+ ++++++++|+++..++++..+.|++.+
T Consensus 74 ~~f~~-~~~~~~-----~~~~~~~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~---------- 137 (542)
T 1w4x_A 74 YSFSE-EVLQEW-----NWTERYASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNH---------- 137 (542)
T ss_dssp CCSCH-HHHHHC-----CCCBSSCBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETT----------
T ss_pred cccCh-hhhhcc-----CcccccCCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECC----------
Confidence 00000 000000 001123567888899988888876 679999999999987655556787765
Q ss_pred cccccceEEEcCEEEEecCCCCc
Q 006466 264 ENFQRGVELRGRITLLAEGCRGS 286 (644)
Q Consensus 264 ~~~~~g~~i~a~~vV~A~G~~s~ 286 (644)
|.+++||.||+|+|.+|.
T Consensus 138 -----G~~~~ad~vV~AtG~~s~ 155 (542)
T 1w4x_A 138 -----GDRIRARYLIMASGQLSV 155 (542)
T ss_dssp -----CCEEEEEEEEECCCSCCC
T ss_pred -----CCEEEeCEEEECcCCCCC
Confidence 567999999999998763
No 83
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.17 E-value=7.2e-11 Score=131.66 Aligned_cols=137 Identities=18% Similarity=0.256 Sum_probs=93.5
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCee-eeccCC
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIR-VPVSSD 184 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~-~~~~~~ 184 (644)
+.+||||||||++|+++|+.|++. |++|+|||+++.+|+... ....|-. ..+...
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~------g~~v~iiE~~~~~GGtw~------------------~~~yPg~~~d~~~~ 63 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQA------GMKVLGIEAGEDVGGTWY------------------WNRYPGCRLDTESY 63 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSCTHHH------------------HCCCTTCBCSSCHH
T ss_pred CCCCEEEECccHHHHHHHHHHHhC------CCCEEEEeCCCCCCCccc------------------cCCCCceeecCchh
Confidence 468999999999999999999998 999999999998887431 1100000 000000
Q ss_pred cEEEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCC--EEecCceEEEEEEcCCCcEEEEEeCcCccccCCCc
Q 006466 185 KFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGV--EIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSK 262 (644)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv--~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~ 262 (644)
.+.+.-... +............+.++.++|.+.+++.|+ .++++++|+++..++++..+.|++.+
T Consensus 64 ~y~~~f~~~----~~~~~~~~~~~~~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~--------- 130 (545)
T 3uox_A 64 AYGYFALKG----IIPEWEWSENFASQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDN--------- 130 (545)
T ss_dssp HHCHHHHTT----SSTTCCCSBSSCBHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETT---------
T ss_pred hcccccCcc----cccCCCccccCCCHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECC---------
Confidence 000000000 000001112335788899999999999887 79999999999887765566788876
Q ss_pred ccccccceEEEcCEEEEecCCCC
Q 006466 263 KENFQRGVELRGRITLLAEGCRG 285 (644)
Q Consensus 263 ~~~~~~g~~i~a~~vV~A~G~~s 285 (644)
|.++++|.||+|+|..+
T Consensus 131 ------G~~~~ad~lV~AtG~~s 147 (545)
T 3uox_A 131 ------EEVVTCRFLISATGPLS 147 (545)
T ss_dssp ------TEEEEEEEEEECCCSCB
T ss_pred ------CCEEEeCEEEECcCCCC
Confidence 67899999999999765
No 84
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.16 E-value=9.3e-11 Score=121.74 Aligned_cols=118 Identities=21% Similarity=0.309 Sum_probs=87.9
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCc
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDK 185 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~ 185 (644)
+.+||+|||||+||+++|+.|++. |++|+|||+.+.+|+... ..++...
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~------g~~v~lie~~~~~gG~~~-----------~~~~~~~-------------- 54 (332)
T 3lzw_A 6 KVYDITIIGGGPVGLFTAFYGGMR------QASVKIIESLPQLGGQLS-----------ALYPEKY-------------- 54 (332)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSCHHHH-----------HHCTTSE--------------
T ss_pred ccceEEEECCCHHHHHHHHHHHHC------CCCEEEEEcCCCCCceeh-----------hcCCCce--------------
Confidence 358999999999999999999999 999999999998875321 0111000
Q ss_pred EEEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccc
Q 006466 186 FWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKEN 265 (644)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~ 265 (644)
+ ..++.. ..+.+..+...|.+.+++.|++++++++|+++..++++. +.|.+.+
T Consensus 55 ~--------~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~-~~v~~~~------------ 107 (332)
T 3lzw_A 55 I--------YDVAGF------PKIRAQELINNLKEQMAKFDQTICLEQAVESVEKQADGV-FKLVTNE------------ 107 (332)
T ss_dssp E--------CCSTTC------SSEEHHHHHHHHHHHHTTSCCEEECSCCEEEEEECTTSC-EEEEESS------------
T ss_pred E--------eccCCC------CCCCHHHHHHHHHHHHHHhCCcEEccCEEEEEEECCCCc-EEEEECC------------
Confidence 0 001100 014578889999999999999999999999998876533 3577765
Q ss_pred cccceEEEcCEEEEecCCCC
Q 006466 266 FQRGVELRGRITLLAEGCRG 285 (644)
Q Consensus 266 ~~~g~~i~a~~vV~A~G~~s 285 (644)
|. +.+|.||+|+|.++
T Consensus 108 ---g~-~~~d~vVlAtG~~~ 123 (332)
T 3lzw_A 108 ---ET-HYSKTVIITAGNGA 123 (332)
T ss_dssp ---EE-EEEEEEEECCTTSC
T ss_pred ---CE-EEeCEEEECCCCCc
Confidence 44 99999999999854
No 85
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=99.15 E-value=4.8e-09 Score=116.41 Aligned_cols=42 Identities=38% Similarity=0.534 Sum_probs=38.5
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCccc
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHII 153 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~ 153 (644)
+.+||||||||++||+||..|++. |++|+|+|+++.+|+.+.
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~~------G~~V~vlE~~~~~GGr~~ 44 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHDS------GLNVVVLEARDRVGGRTY 44 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHHT------TCCEEEECSSSSSBTTCC
T ss_pred CCceEEEECCCHHHHHHHHHHHHC------CCCEEEEeCCCCCCCcee
Confidence 357999999999999999999999 999999999999988653
No 86
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.14 E-value=2.6e-10 Score=124.85 Aligned_cols=155 Identities=15% Similarity=0.189 Sum_probs=90.9
Q ss_pred cccEEEECCCHHHHHHHHHHHh---hchhcCCCCe---EEEEcCCCCCCCcccccCc--cChHHHHHHhhhhhhcCCCee
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQ---LCREKNVDLS---VCVVEKGAEVGAHIISGNV--FEPRALNELLPQWKQEEAPIR 178 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~---~~~~~~~G~~---V~viEk~~~~g~~~~~g~~--i~~~~l~~l~~~~~~~~~~~~ 178 (644)
.+||+||||||||+++|..|++ . |++ |+|||+.+.+|+.+..... ..+..+ +........+.
T Consensus 2 ~~~V~IIGaG~aGl~aA~~L~~~~~~------G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~----~~~~~~y~~l~ 71 (464)
T 2xve_A 2 ATRIAILGAGPSGMAQLRAFQSAQEK------GAEIPELVCFEKQADWGGQWNYTWRTGLDENGE----PVHSSMYRYLW 71 (464)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHHHT------TCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSS----BCCCCCCTTCB
T ss_pred CCcEEEECccHHHHHHHHHHHhhhhc------CCCCCcEEEEEcCCCCCCEeecCCCCCccccCC----CCcCccccchh
Confidence 4699999999999999999999 7 999 9999999988875432110 000000 00000000000
Q ss_pred eeccCCcEEEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCE--EecCceEEEEEEcCCCcEEEEEeCcCcc
Q 006466 179 VPVSSDKFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVE--IYPGFAASEILYDADNKVIGIGTNDMGI 256 (644)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~--i~~g~~v~~v~~~~~g~v~gV~~~d~g~ 256 (644)
.......+.+ ..+.++..........+++..+.++|.+.+++.|++ |+++++|+++..++++..+.|++.+.
T Consensus 72 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~-- 145 (464)
T 2xve_A 72 SNGPKECLEF----ADYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDH-- 145 (464)
T ss_dssp CSSCGGGTCB----TTBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEET--
T ss_pred hcCChhhccc----CCCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEc--
Confidence 0000000000 000010000000122357889999999999999988 99999999998876433445666431
Q ss_pred ccCCCcccccccceEEEcCEEEEecCCCC
Q 006466 257 AKDGSKKENFQRGVELRGRITLLAEGCRG 285 (644)
Q Consensus 257 ~~~G~~~~~~~~g~~i~a~~vV~A~G~~s 285 (644)
.+|+ ..++.+|.||+|+|.++
T Consensus 146 -~~g~-------~~~~~~d~VVvAtG~~s 166 (464)
T 2xve_A 146 -TTDT-------IYSEEFDYVVCCTGHFS 166 (464)
T ss_dssp -TTTE-------EEEEEESEEEECCCSSS
T ss_pred -CCCc-------eEEEEcCEEEECCCCCC
Confidence 1121 15789999999999654
No 87
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.14 E-value=3.7e-10 Score=127.31 Aligned_cols=67 Identities=19% Similarity=0.287 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHHHhcC-CEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccccccceEEEcCEEEEecCCCCcch
Q 006466 211 LSQLVRWLGGKAEELG-VEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLS 288 (644)
Q Consensus 211 r~~l~~~L~~~a~~~G-v~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~~~g~~i~a~~vV~A~G~~s~l~ 288 (644)
...+.+.|.+++++.| ++|++++.|++++.++ +.|.+|.+.+. .+|+ -..+.||.||+|+|.++.+.
T Consensus 133 g~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~~-g~v~Gv~~~~~---~~G~-------~~~i~A~~VVlAtGg~s~~~ 200 (602)
T 1kf6_A 133 GFHMLHTLFQTSLQFPQIQRFDEHFVLDILVDD-GHVRGLVAMNM---MEGT-------LVQIRANAVVMATGGAGRVY 200 (602)
T ss_dssp HHHHHHHHHHHHTTCTTEEEEETEEEEEEEEET-TEEEEEEEEET---TTTE-------EEEEECSCEEECCCCCGGGS
T ss_pred HHHHHHHHHHHHHhCCCcEEEeCCEEEEEEEeC-CEEEEEEEEEc---CCCc-------EEEEEcCeEEECCCCCcccc
Confidence 4578899999999888 9999999999998875 67778765320 1121 13799999999999999764
No 88
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.13 E-value=2.6e-10 Score=117.78 Aligned_cols=114 Identities=20% Similarity=0.291 Sum_probs=84.2
Q ss_pred cccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCC
Q 006466 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSD 184 (644)
Q Consensus 105 ~~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~ 184 (644)
.+.+||+|||||+||+++|+.|++. |++|+|||+. +|+.......
T Consensus 13 ~~~~~vvIIG~G~aGl~aA~~l~~~------g~~v~lie~~--~gg~~~~~~~--------------------------- 57 (323)
T 3f8d_A 13 GEKFDVIIVGLGPAAYGAALYSARY------MLKTLVIGET--PGGQLTEAGI--------------------------- 57 (323)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESS--TTGGGGGCCE---------------------------
T ss_pred CCccCEEEECccHHHHHHHHHHHHC------CCcEEEEecc--CCCeeccccc---------------------------
Confidence 3468999999999999999999999 9999999998 5653221000
Q ss_pred cEEEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCccc
Q 006466 185 KFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKE 264 (644)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~ 264 (644)
...+|... .+....+.+.|.+.+++.|++++. .+|+++..+++. +.|.+.+
T Consensus 58 ---------~~~~~~~~------~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~~~--~~v~~~~----------- 108 (323)
T 3f8d_A 58 ---------VDDYLGLI------EIQASDMIKVFNKHIEKYEVPVLL-DIVEKIENRGDE--FVVKTKR----------- 108 (323)
T ss_dssp ---------ECCSTTST------TEEHHHHHHHHHHHHHTTTCCEEE-SCEEEEEEC--C--EEEEESS-----------
T ss_pred ---------ccccCCCC------CCCHHHHHHHHHHHHHHcCCEEEE-EEEEEEEecCCE--EEEEECC-----------
Confidence 00011100 156678899999999999999998 889999877533 3466654
Q ss_pred ccccceEEEcCEEEEecCCCCc
Q 006466 265 NFQRGVELRGRITLLAEGCRGS 286 (644)
Q Consensus 265 ~~~~g~~i~a~~vV~A~G~~s~ 286 (644)
|.++.+|.||+|+|.++.
T Consensus 109 ----g~~~~~d~lvlAtG~~~~ 126 (323)
T 3f8d_A 109 ----KGEFKADSVILGIGVKRR 126 (323)
T ss_dssp ----SCEEEEEEEEECCCCEEC
T ss_pred ----CCEEEcCEEEECcCCCCc
Confidence 568999999999998753
No 89
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=99.13 E-value=6.6e-11 Score=134.46 Aligned_cols=89 Identities=19% Similarity=0.195 Sum_probs=62.1
Q ss_pred HHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccccccceEEEcCEEEEecCCCCcchHH
Q 006466 211 LSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEK 290 (644)
Q Consensus 211 r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~~~g~~i~a~~vV~A~G~~s~l~~~ 290 (644)
...+...|.+++.+.||+|+.++.|++++.++ |++.||.+.+. .+|+. ..+.||.||+|+|..+.+
T Consensus 157 G~~l~~~L~~~a~~~gv~i~~~~~v~~L~~~~-g~v~Gv~~~~~---~~G~~-------~~i~A~~VVlATGG~~~~--- 222 (660)
T 2bs2_A 157 GHTMLFAVANECLKLGVSIQDRKEAIALIHQD-GKCYGAVVRDL---VTGDI-------IAYVAKGTLIATGGYGRI--- 222 (660)
T ss_dssp HHHHHHHHHHHHHHHTCEEECSEEEEEEEEET-TEEEEEEEEET---TTCCE-------EEEECSEEEECCCCCGGG---
T ss_pred HHHHHHHHHHHHHhCCCEEEECcEEEEEEecC-CEEEEEEEEEC---CCCcE-------EEEEcCEEEEccCcchhh---
Confidence 35788999999999999999999999998764 77888876420 12321 369999999999999864
Q ss_pred HHHHcCCCcccccCcccceeEEEEEEeecC
Q 006466 291 LIKNFKLREKSHAQHQTYALGIKEVWEIDE 320 (644)
Q Consensus 291 l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 320 (644)
|... ...+...|.|+.+.+....
T Consensus 223 ----y~~t---t~~~~~tGdG~~mA~~aGa 245 (660)
T 2bs2_A 223 ----YKNT---TNAVVCEGTGTAIALETGI 245 (660)
T ss_dssp ----SSSB---SSCTTCSCHHHHHHHTTSS
T ss_pred ----cCCC---CCCCCcccHHHHHHHHcCC
Confidence 2211 2334455666555444443
No 90
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.13 E-value=8.2e-11 Score=121.41 Aligned_cols=118 Identities=22% Similarity=0.314 Sum_probs=80.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcE
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (644)
.|||+||||||||++||+.|+++ |++|+|||+... ++.+.+ +++.+..+
T Consensus 4 ~yDvvIIG~GpAGl~AA~~la~~------g~~v~liE~~~~-gg~~~~-G~~~~~~~----------------------- 52 (314)
T 4a5l_A 4 IHDVVIIGSGPAAHTAAIYLGRS------SLKPVMYEGFMA-GGVAAG-GQLTTTTI----------------------- 52 (314)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT------TCCCEEECCSSG-GGCCTT-CGGGGSSE-----------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHHC------CCCEEEEecCCC-CCcccC-CCcCChHH-----------------------
Confidence 59999999999999999999999 999999999753 333332 33322110
Q ss_pred EEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCccccc
Q 006466 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (644)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~ 266 (644)
+. ++|.. ...++..++...+.+.+++.++++.... +.....+.+. . .+.+.+
T Consensus 53 --i~-----~~~g~-----~~~i~~~~l~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~-~-~~~~~~------------- 104 (314)
T 4a5l_A 53 --IE-----NFPGF-----PNGIDGNELMMNMRTQSEKYGTTIITET-IDHVDFSTQP-F-KLFTEE------------- 104 (314)
T ss_dssp --EC-----CSTTC-----TTCEEHHHHHHHHHHHHHHTTCEEECCC-EEEEECSSSS-E-EEEETT-------------
T ss_pred --hh-----hccCC-----cccCCHHHHHHHHHHHHhhcCcEEEEeE-EEEeecCCCc-e-EEEECC-------------
Confidence 00 01100 0124567788888899999999988664 5555544433 2 344444
Q ss_pred ccceEEEcCEEEEecCCCC
Q 006466 267 QRGVELRGRITLLAEGCRG 285 (644)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s 285 (644)
+.++.+|.||+|+|+++
T Consensus 105 --~~~~~~~~liiATG~~~ 121 (314)
T 4a5l_A 105 --GKEVLTKSVIIATGATA 121 (314)
T ss_dssp --CCEEEEEEEEECCCEEE
T ss_pred --CeEEEEeEEEEcccccc
Confidence 57899999999999765
No 91
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=99.12 E-value=3e-10 Score=129.26 Aligned_cols=165 Identities=19% Similarity=0.248 Sum_probs=93.5
Q ss_pred cccccEEEECCCHHHHHHHHHHH---h-hchhcCCCCeEEEEcCCCCCCCcccccCc------cC-------hHHHHHHh
Q 006466 105 SMAYDVVIVGAGPAGLSAAIRLK---Q-LCREKNVDLSVCVVEKGAEVGAHIISGNV------FE-------PRALNELL 167 (644)
Q Consensus 105 ~~~~DVvIVGgG~aGl~aA~~La---~-~~~~~~~G~~V~viEk~~~~g~~~~~g~~------i~-------~~~l~~l~ 167 (644)
..++||||||||+|||+||+.|+ + . |.+|+||||....+++..+++. +. ......++
T Consensus 20 ~~~~DVvVIG~G~AGl~AAl~aa~~~~~~------G~~V~vlEK~~~~~s~~~a~G~~~~~~~~~~~~~~g~~ds~~~~~ 93 (643)
T 1jnr_A 20 VVETDILIIGGGFSGCGAAYEAAYWAKLG------GLKVTLVEKAAVERSGAVAQGLSAINTYIDLTGRSERQNTLEDYV 93 (643)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHHHTTT------TCCEEEECSSCTTTCSTTTTCEEEESCCCCSSSSBSCCCCHHHHH
T ss_pred eccCCEEEECcCHHHHHHHHHHhhhhhhC------CCeEEEEeCcCCCCCcceecccccccchhhHHHhcCCCCCHHHHH
Confidence 45799999999999999999999 5 7 9999999998754333222211 20 01111111
Q ss_pred hhhhhcCCCee----e----eccCCcEEEeccCCccccCCC----CCCCC--cEEEcHHHHHHHHHHHHHhc-CC-EEec
Q 006466 168 PQWKQEEAPIR----V----PVSSDKFWFLTKDRAFSLPSP----FSNRG--NYVISLSQLVRWLGGKAEEL-GV-EIYP 231 (644)
Q Consensus 168 ~~~~~~~~~~~----~----~~~~~~~~~~~~~~~~~~~~~----~~~~~--~~~v~r~~l~~~L~~~a~~~-Gv-~i~~ 231 (644)
.+.......+. . ....+.+.++.. .++.+... ....+ ...+....+.+.|.+.+++. || +|+.
T Consensus 94 ~~~~~~g~~l~d~~~v~~~~~~~~~~i~~l~~-~Gv~f~~~~~g~~~~~~~~~~~~~g~~~~~~l~~~~~~~~gv~~i~~ 172 (643)
T 1jnr_A 94 RYVTLDMMGLAREDLVADYARHVDGTVHLFEK-WGLPIWKTPDGKYVREGQWQIMIHGESYKPIIAEAAKMAVGEENIYE 172 (643)
T ss_dssp HHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH-TTCCBCBCTTSCBCBSSSSCEEEEETTHHHHHHHHHHHHHCGGGEEC
T ss_pred HHHHHHhcCcCcHHHHHHHHHHHHHHHHHHHH-cCCcceeCCCCCccCCCccccCCCcHHHHHHHHHHHHhcCCCcEEEe
Confidence 11110000000 0 000000111110 01111000 00000 11233445778888888887 99 9999
Q ss_pred CceEEEEEEcCC--CcEEEEEeCcCccccCCCcccccccceEEEcCEEEEecCCCCc
Q 006466 232 GFAASEILYDAD--NKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 286 (644)
Q Consensus 232 g~~v~~v~~~~~--g~v~gV~~~d~g~~~~G~~~~~~~~g~~i~a~~vV~A~G~~s~ 286 (644)
++.|++++.+++ |+|.||...+. .+|+ ...+.||.||+|+|..+.
T Consensus 173 ~~~v~~L~~~~~~~g~v~Gv~~~~~---~~g~-------~~~i~A~~VVlAtGG~~~ 219 (643)
T 1jnr_A 173 RVFIFELLKDNNDPNAVAGAVGFSV---REPK-------FYVFKAKAVILATGGATL 219 (643)
T ss_dssp SEEEEEEEECTTCTTBEEEEEEEES---SSSC-------EEEEECSEEEECCCCBCS
T ss_pred cCEEEEEEEcCCccceeEEEEEEEe---cCCc-------EEEEEcCEEEECCCcccc
Confidence 999999998764 28888875321 1222 247999999999999986
No 92
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=99.11 E-value=2.1e-09 Score=118.53 Aligned_cols=57 Identities=16% Similarity=0.188 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHhcC-CEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccccccceEEEcCEEEEecCCCC
Q 006466 212 SQLVRWLGGKAEELG-VEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRG 285 (644)
Q Consensus 212 ~~l~~~L~~~a~~~G-v~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~~~g~~i~a~~vV~A~G~~s 285 (644)
..+.+.|.+.+++.| ++|+++++|++|..++++ + .|++.+ |.+++||.||.|.|...
T Consensus 255 ~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~~-v-~v~~~~---------------g~~~~ad~vI~a~~~~~ 312 (495)
T 2vvm_A 255 SAFARRFWEEAAGTGRLGYVFGCPVRSVVNERDA-A-RVTARD---------------GREFVAKRVVCTIPLNV 312 (495)
T ss_dssp HHHHHHHHHHHHTTTCEEEESSCCEEEEEECSSS-E-EEEETT---------------CCEEEEEEEEECCCGGG
T ss_pred HHHHHHHHHHhhhcCceEEEeCCEEEEEEEcCCE-E-EEEECC---------------CCEEEcCEEEECCCHHH
Confidence 467777888888888 999999999999887644 4 477655 56799999999999653
No 93
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.10 E-value=6.6e-10 Score=121.84 Aligned_cols=146 Identities=21% Similarity=0.219 Sum_probs=88.0
Q ss_pred cEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcc-cccCc----cCh-----HHHHHHh-----------
Q 006466 109 DVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHI-ISGNV----FEP-----RALNELL----------- 167 (644)
Q Consensus 109 DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~-~~g~~----i~~-----~~l~~l~----------- 167 (644)
||||||||+||+++|+.|++. |++|+||||. ..++++ .+.+. +.+ ..+.+.+
T Consensus 1 DVvVIG~G~AGl~aA~~la~~------G~~V~viek~-~~~g~s~~a~Ggi~~~~~~~d~~~~~~~d~l~~g~~~~d~~~ 73 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRA------GKKVTLISKR-IDGGSTPIAKGGVAASVGSDDSPELHAQDTIRVGDGLCDVKT 73 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHT------TCCEEEECSS-TTCSSGGGCCSCEECCCSTTCCHHHHHHHHHHHHTTCSCHHH
T ss_pred CEEEECCCHHHHHHHHHHHHC------CCCEEEEeCC-CCCchHHHHhCCeEEeCCCCCCHHHHHHHHHHhcCCcCCHHH
Confidence 899999999999999999998 9999999999 445443 22211 111 1111110
Q ss_pred ------------hhhhhcCCCeeeeccCCcEEEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceE
Q 006466 168 ------------PQWKQEEAPIRVPVSSDKFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAA 235 (644)
Q Consensus 168 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v 235 (644)
..+...+.++.. + +........+..... + -.....+.+.|.+++++.|++++.++.|
T Consensus 74 v~~~~~~~~~~i~~l~~~Gv~~~~----~----~~~~~g~~~~r~~~~-~--d~~g~~l~~~L~~~~~~~gv~i~~~~~v 142 (472)
T 2e5v_A 74 VNYVTSEAKNVIETFESWGFEFEE----D----LRLEGGHTKRRVLHR-T--DETGREIFNFLLKLAREEGIPIIEDRLV 142 (472)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCS----S----CBCCTTCSSCCEECS-S--SCHHHHHHHHHHHHHHHTTCCEECCCEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCc----c----cccccCcCcCcEEEe-C--CCCHHHHHHHHHHHHHhCCCEEEECcEE
Confidence 001111111100 0 000000011100000 0 0235678889999998889999999999
Q ss_pred EEEEEcCCCcEEEEEeCcCccccCCCcccccccceEEEcCEEEEecCCCCcch
Q 006466 236 SEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLS 288 (644)
Q Consensus 236 ~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~~~g~~i~a~~vV~A~G~~s~l~ 288 (644)
++..++ +.+.+|.+.+ . +.++.||.||+|+|.++.+.
T Consensus 143 -~l~~~~-~~v~Gv~v~~----~----------~g~~~a~~VVlAtGg~~~~~ 179 (472)
T 2e5v_A 143 -EIRVKD-GKVTGFVTEK----R----------GLVEDVDKLVLATGGYSYLY 179 (472)
T ss_dssp -EEEEET-TEEEEEEETT----T----------EEECCCSEEEECCCCCGGGS
T ss_pred -EEEEeC-CEEEEEEEEe----C----------CCeEEeeeEEECCCCCcccC
Confidence 998765 6777877642 0 23477999999999998653
No 94
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=99.10 E-value=8.4e-10 Score=115.99 Aligned_cols=149 Identities=15% Similarity=0.184 Sum_probs=82.8
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCc-ccccCccCh-------HH----HHHHhhhhhhcCC
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAH-IISGNVFEP-------RA----LNELLPQWKQEEA 175 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~-~~~g~~i~~-------~~----l~~l~~~~~~~~~ 175 (644)
+||||||||++|+++|+.|++......|+.+|+|||+....++. ..+++.+.+ .. ..+.+..|.....
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~~~~aS~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFTPLTTTDVAAGLWQPYLSDPNNPQEADWSQQTFDYLLSHVH 80 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCGGGSGGGTCCCBCCCCSSCCSCTHHHHHHHHHHHHHHTTTT
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCCCCCccccCcceeecccCCCchHHHHHHHHHHHHHHHHHhh
Confidence 38999999999999999999980000012999999998643322 234444432 01 1112222322110
Q ss_pred -------Cee------eeccCC----------cEEEeccCCccccCCC---CCCCCcEEEcHHHHHHHHHHHHHhcCCEE
Q 006466 176 -------PIR------VPVSSD----------KFWFLTKDRAFSLPSP---FSNRGNYVISLSQLVRWLGGKAEELGVEI 229 (644)
Q Consensus 176 -------~~~------~~~~~~----------~~~~~~~~~~~~~~~~---~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i 229 (644)
.+. ...... .+.+++...--.+|.. ... ....++...+.++|.+.+++.|++|
T Consensus 81 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~e~~~~p~~~~~~~~-~~~~v~p~~~~~~l~~~~~~~Gv~i 159 (351)
T 3g3e_A 81 SPNAENLGLFLISGYNLFHEAIPDPSWKDTVLGFRKLTPRELDMFPDYGYGWFH-TSLILEGKNYLQWLTERLTERGVKF 159 (351)
T ss_dssp STTHHHHTEEEEEEEEEESSCCCCCGGGGTSEEEEECCHHHHTTCTTCCEEEEE-EEEEECHHHHHHHHHHHHHHTTCEE
T ss_pred ccCCCCccEEEEEEEEEecCCccccCHHHhCCCceECCHHHhccCCCCceEEEe-cceEEcHHHHHHHHHHHHHHCCCEE
Confidence 000 000000 0111110000001110 000 1356889999999999999999999
Q ss_pred ecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccccccceEEEcCEEEEecCCCCc
Q 006466 230 YPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 286 (644)
Q Consensus 230 ~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~~~g~~i~a~~vV~A~G~~s~ 286 (644)
+. ++|+++..+ ..++||.||+|+|.++.
T Consensus 160 ~~-~~V~~i~~~----------------------------~~~~a~~VV~A~G~~s~ 187 (351)
T 3g3e_A 160 FQ-RKVESFEEV----------------------------AREGADVIVNCTGVWAG 187 (351)
T ss_dssp EE-CCCCCHHHH----------------------------HHTTCSEEEECCGGGGG
T ss_pred EE-EEeCCHHHh----------------------------hcCCCCEEEECCCcChH
Confidence 87 777544211 12579999999999873
No 95
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.09 E-value=4.2e-10 Score=116.83 Aligned_cols=116 Identities=28% Similarity=0.344 Sum_probs=83.2
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCc
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDK 185 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~ 185 (644)
..+||+||||||||+++|+.|++. |++|+|||+. .+|+.+.....+
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~------g~~v~lie~~-~~gg~~~~~~~~--------------------------- 52 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRA------QLSTLILEKG-MPGGQIAWSEEV--------------------------- 52 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESS-CTTGGGGGCSCB---------------------------
T ss_pred ccCCEEEECCCHHHHHHHHHHHHc------CCcEEEEeCC-CCCccccccccc---------------------------
Confidence 468999999999999999999999 9999999998 566533211000
Q ss_pred EEEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEc--CCCcEEEEEeCcCccccCCCcc
Q 006466 186 FWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYD--ADNKVIGIGTNDMGIAKDGSKK 263 (644)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~--~~g~v~gV~~~d~g~~~~G~~~ 263 (644)
..++.. ...+.+..+.+.|.+.+++.|++++. .+|+++..+ +++ .+.|.+.+
T Consensus 53 ---------~~~~~~-----~~~~~~~~~~~~l~~~~~~~gv~~~~-~~v~~i~~~~~~~~-~~~v~~~~---------- 106 (325)
T 2q7v_A 53 ---------ENFPGF-----PEPIAGMELAQRMHQQAEKFGAKVEM-DEVQGVQHDATSHP-YPFTVRGY---------- 106 (325)
T ss_dssp ---------CCSTTC-----SSCBCHHHHHHHHHHHHHHTTCEEEE-CCEEEEEECTTSSS-CCEEEEES----------
T ss_pred ---------ccCCCC-----CCCCCHHHHHHHHHHHHHHcCCEEEe-eeEEEEEeccCCCc-eEEEEECC----------
Confidence 000000 00245678889999999999999988 478888876 432 12355444
Q ss_pred cccccceEEEcCEEEEecCCCCc
Q 006466 264 ENFQRGVELRGRITLLAEGCRGS 286 (644)
Q Consensus 264 ~~~~~g~~i~a~~vV~A~G~~s~ 286 (644)
|.++.+|.||+|+|.++.
T Consensus 107 -----g~~~~~~~vv~AtG~~~~ 124 (325)
T 2q7v_A 107 -----NGEYRAKAVILATGADPR 124 (325)
T ss_dssp -----SCEEEEEEEEECCCEEEC
T ss_pred -----CCEEEeCEEEECcCCCcC
Confidence 568999999999998653
No 96
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.08 E-value=4.3e-10 Score=116.15 Aligned_cols=112 Identities=25% Similarity=0.352 Sum_probs=76.3
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCc
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDK 185 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~ 185 (644)
++|||+||||||||++||+.|+++ |++|+||||. .+|+.+....++..
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~~------g~~V~liE~~-~~gG~~~~~~~i~~------------------------- 52 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASRA------NLKTVMIERG-IPGGQMANTEEVEN------------------------- 52 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESS-CTTGGGGGCSCBCC-------------------------
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC------CCCEEEEecC-CCCCeeecccccCC-------------------------
Confidence 579999999999999999999999 9999999986 46665443322210
Q ss_pred EEEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccc
Q 006466 186 FWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKEN 265 (644)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~ 265 (644)
+|.. -.+...++.....+...+.++.+..+..+....... .. .+. .+
T Consensus 53 -----------~p~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~-~~------------ 99 (312)
T 4gcm_A 53 -----------FPGF------EMITGPDLSTKMFEHAKKFGAVYQYGDIKSVEDKGE-YK--VIN-FG------------ 99 (312)
T ss_dssp -----------STTC------SSBCHHHHHHHHHHHHHHTTCEEEECCCCEEEECSS-CE--EEE-CS------------
T ss_pred -----------cCCc------cccchHHHHHHHHHHHhhccccccceeeeeeeeeec-ce--eec-cC------------
Confidence 0100 012345566666777777788887777665544332 21 232 22
Q ss_pred cccceEEEcCEEEEecCCCC
Q 006466 266 FQRGVELRGRITLLAEGCRG 285 (644)
Q Consensus 266 ~~~g~~i~a~~vV~A~G~~s 285 (644)
+.++++|.+|+|+|.++
T Consensus 100 ---~~~~~~d~liiAtGs~~ 116 (312)
T 4gcm_A 100 ---NKELTAKAVIIATGAEY 116 (312)
T ss_dssp ---SCEEEEEEEEECCCEEE
T ss_pred ---CeEEEeceeEEcccCcc
Confidence 57899999999999765
No 97
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.08 E-value=3.1e-10 Score=115.73 Aligned_cols=111 Identities=17% Similarity=0.233 Sum_probs=81.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcE
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (644)
.+||+|||||+||+++|+.|++. |++|+|||+.+..+... .+
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~------g~~v~lie~~~~~~~~~----------------~~---------------- 43 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRA------RKNILLVDAGERRNRFA----------------SH---------------- 43 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT------TCCEEEEECCCCGGGGC----------------SC----------------
T ss_pred CCCEEEECCCHHHHHHHHHHHhC------CCCEEEEeCCCcccccc----------------hh----------------
Confidence 58999999999999999999999 99999999976322100 00
Q ss_pred EEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhc-CCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccc
Q 006466 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEEL-GVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKEN 265 (644)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~-Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~ 265 (644)
...++. ........+...+.+.+++. +++++.+ +|+++..++++ +.|.+.+
T Consensus 44 -------~~~~~~------~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v~~i~~~~~~--~~v~~~~------------ 95 (297)
T 3fbs_A 44 -------SHGFLG------QDGKAPGEIIAEARRQIERYPTIHWVEG-RVTDAKGSFGE--FIVEIDG------------ 95 (297)
T ss_dssp -------CCSSTT------CTTCCHHHHHHHHHHHHTTCTTEEEEES-CEEEEEEETTE--EEEEETT------------
T ss_pred -------hcCCcC------CCCCCHHHHHHHHHHHHHhcCCeEEEEe-EEEEEEEcCCe--EEEEECC------------
Confidence 000110 00134577888899988887 6888765 89999877643 3577765
Q ss_pred cccceEEEcCEEEEecCCCCc
Q 006466 266 FQRGVELRGRITLLAEGCRGS 286 (644)
Q Consensus 266 ~~~g~~i~a~~vV~A~G~~s~ 286 (644)
|.++.+|.||+|+|.++.
T Consensus 96 ---g~~~~~d~vviAtG~~~~ 113 (297)
T 3fbs_A 96 ---GRRETAGRLILAMGVTDE 113 (297)
T ss_dssp ---SCEEEEEEEEECCCCEEE
T ss_pred ---CCEEEcCEEEECCCCCCC
Confidence 568999999999998764
No 98
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.08 E-value=6.4e-10 Score=121.10 Aligned_cols=162 Identities=17% Similarity=0.111 Sum_probs=91.7
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCC--eEEEEcCCCCCCCcccccCccChH-HHHHHhhhhhhcCCCeee---
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDL--SVCVVEKGAEVGAHIISGNVFEPR-ALNELLPQWKQEEAPIRV--- 179 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~--~V~viEk~~~~g~~~~~g~~i~~~-~l~~l~~~~~~~~~~~~~--- 179 (644)
+.+||+||||||+||++|+.|++. |. +|+|||+.+.+|+........... .+....+... ..++..
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~------G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~--~~~~~~g~~ 76 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAE------KAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILT--TEPIVGPAA 76 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTT------TCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCC--CCCBCCSSS
T ss_pred CCCEEEEECccHHHHHHHHHHHhc------CCCCCeEEEecCCCCCCeecCCCCCCccccccccccccc--ccccccccc
Confidence 458999999999999999999999 99 999999998887654322211000 0000000000 000000
Q ss_pred -e-ccCCcEEEeccCC---ccccCC-CCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCc
Q 006466 180 -P-VSSDKFWFLTKDR---AFSLPS-PFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTND 253 (644)
Q Consensus 180 -~-~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d 253 (644)
. .....+..+..+. ...++. ++.......+++..+.++|.+.+++.++.++++++|+++..++++ +.|++.+
T Consensus 77 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~--~~V~~~~ 154 (447)
T 2gv8_A 77 LPVYPSPLYRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGS--WVVTYKG 154 (447)
T ss_dssp CCBCCCCCCTTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTE--EEEEEEE
T ss_pred cCCccCchhhhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCe--EEEEEee
Confidence 0 0000000000000 001110 011111233578899999999998888889999999999876532 3465543
Q ss_pred CccccCCCcccccccceEEEcCEEEEecCCCCc
Q 006466 254 MGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 286 (644)
Q Consensus 254 ~g~~~~G~~~~~~~~g~~i~a~~vV~A~G~~s~ 286 (644)
. .+|+. ..++.+|.||+|+|.+|.
T Consensus 155 ~---~~G~~------~~~~~~d~VVvAtG~~s~ 178 (447)
T 2gv8_A 155 T---KAGSP------ISKDIFDAVSICNGHYEV 178 (447)
T ss_dssp S---STTCC------EEEEEESEEEECCCSSSS
T ss_pred c---CCCCe------eEEEEeCEEEECCCCCCC
Confidence 1 01210 027999999999999653
No 99
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.07 E-value=4.1e-10 Score=117.30 Aligned_cols=53 Identities=36% Similarity=0.506 Sum_probs=44.2
Q ss_pred cccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChH
Q 006466 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPR 161 (644)
Q Consensus 105 ~~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~ 161 (644)
..++||+|||||||||+||+.|++. ..|++|+||||.+.+|+.+..++.+.++
T Consensus 63 ~~~~DV~IIGaGPAGlsAA~~la~~----r~G~~V~viEk~~~~GG~~~~~~~~~~~ 115 (326)
T 3fpz_A 63 FAVSDVIIVGAGSSGLSAAYVIAKN----RPDLKVCIIESSVAPGGGSWLGGQLFSA 115 (326)
T ss_dssp TTEESEEEECCSHHHHHHHHHHHHH----CTTSCEEEECSSSSCCTTTTCCSTTCCC
T ss_pred ccCCCEEEECCCHHHHHHHHHHHHh----CCCCeEEEEECCCCCCceEEeCCccCCH
Confidence 3468999999999999999999753 1299999999999999988777766543
No 100
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.07 E-value=5.9e-10 Score=114.80 Aligned_cols=113 Identities=22% Similarity=0.306 Sum_probs=82.8
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCC-eEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcE
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~-~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (644)
+||+||||||+|+++|+.|++. |+ +|+|||+. .+|+.+.....+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~------g~~~v~lie~~-~~gg~~~~~~~~---------------------------- 46 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRG------GVKNAVLFEKG-MPGGQITGSSEI---------------------------- 46 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT------TCSSEEEECSS-STTCGGGGCSCB----------------------------
T ss_pred ceEEEECccHHHHHHHHHHHHC------CCCcEEEEcCC-CCCccccccccc----------------------------
Confidence 7999999999999999999999 99 99999995 455532211000
Q ss_pred EEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCccccc
Q 006466 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (644)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~ 266 (644)
..+|.. ...+++..+.+.|.+.+++.|++++. .+|+++..+++ . +.|.+.+
T Consensus 47 --------~~~~~~-----~~~~~~~~~~~~l~~~~~~~~v~~~~-~~v~~i~~~~~-~-~~v~~~~------------- 97 (311)
T 2q0l_A 47 --------ENYPGV-----KEVVSGLDFMQPWQEQCFRFGLKHEM-TAVQRVSKKDS-H-FVILAED------------- 97 (311)
T ss_dssp --------CCSTTC-----CSCBCHHHHHHHHHHHHHTTSCEEEC-SCEEEEEEETT-E-EEEEETT-------------
T ss_pred --------ccCCCC-----cccCCHHHHHHHHHHHHHHcCCEEEE-EEEEEEEEcCC-E-EEEEEcC-------------
Confidence 000100 01256788899999999999999988 68999987653 2 3465554
Q ss_pred ccceEEEcCEEEEecCCCCc
Q 006466 267 QRGVELRGRITLLAEGCRGS 286 (644)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~ 286 (644)
|.++.+|.||+|+|.++.
T Consensus 98 --g~~~~~~~vv~AtG~~~~ 115 (311)
T 2q0l_A 98 --GKTFEAKSVIIATGGSPK 115 (311)
T ss_dssp --SCEEEEEEEEECCCEEEC
T ss_pred --CCEEECCEEEECCCCCCC
Confidence 567999999999998764
No 101
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.07 E-value=4.4e-10 Score=125.19 Aligned_cols=90 Identities=13% Similarity=0.163 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHHh-cCCEEecCceEEEEEEcCCC------cEEEEEeCcCccccCCCcccccccceEEEcCEEEEecCCC
Q 006466 212 SQLVRWLGGKAEE-LGVEIYPGFAASEILYDADN------KVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCR 284 (644)
Q Consensus 212 ~~l~~~L~~~a~~-~Gv~i~~g~~v~~v~~~~~g------~v~gV~~~d~g~~~~G~~~~~~~~g~~i~a~~vV~A~G~~ 284 (644)
..+.+.|.+++++ .||+|++++.|++++.++++ ++.||.+.+. .+|+ -..+.||.||+|+|..
T Consensus 138 ~~l~~~L~~~~~~~~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~---~~G~-------~~~i~A~~VVlAtGg~ 207 (540)
T 1chu_A 138 REVETTLVSKALNHPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNR---NKET-------VETCHAKAVVLATGGA 207 (540)
T ss_dssp ----CCCHHHHHHCTTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEET---TTTE-------EEEEECSEEEECCCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEc---CCCc-------EEEEEcCeEEECCCCc
Confidence 4677788888888 79999999999999984435 7888877530 1222 1379999999999999
Q ss_pred CcchHHHHHHcCCCcccccCcccceeEEEEEEeecCC
Q 006466 285 GSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEG 321 (644)
Q Consensus 285 s~l~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 321 (644)
+.+.. . ....+...|.|+.+.+.+...
T Consensus 208 ~~~~~-------~---~~~~~~~tGdG~~ma~~aGa~ 234 (540)
T 1chu_A 208 SKVYQ-------Y---TTNPDISSGDGIAMAWRAGCR 234 (540)
T ss_dssp GGGSS-------S---BSCGGGCSCHHHHHHHHTTCC
T ss_pred ccccC-------C---CcCCCCCchHHHHHHHHcCCC
Confidence 86421 1 122344566666655544443
No 102
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.06 E-value=3.7e-10 Score=119.26 Aligned_cols=135 Identities=24% Similarity=0.281 Sum_probs=84.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCC-eEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCc
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDK 185 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~-~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~ 185 (644)
.+||+|||||++|+++|+.|++. |. +|+|||+.+ +|+.+... ...............
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~------g~~~v~lie~~~-~Gg~~~~~---------------~~~~~~~~~~~~~~~ 61 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDF------GITDVIILEKGT-VGHSFKHW---------------PKSTRTITPSFTSNG 61 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT------TCCCEEEECSSS-TTHHHHTS---------------CTTCBCSSCCCCCGG
T ss_pred cCcEEEECcCHHHHHHHHHHHHc------CCCcEEEEecCC-CCCccccC---------------cccccccCcchhccc
Confidence 58999999999999999999999 99 999999988 66532110 000000000000000
Q ss_pred EEEeccCCccccCCCCC----CCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCC
Q 006466 186 FWFLTKDRAFSLPSPFS----NRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGS 261 (644)
Q Consensus 186 ~~~~~~~~~~~~~~~~~----~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~ 261 (644)
+.+. .+..+.... ......+.+..+.+.|.+.+++.|++++++++|+++..++++ + .|.+.+
T Consensus 62 ~g~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~-~-~v~~~~-------- 127 (369)
T 3d1c_A 62 FGMP----DMNAISMDTSPAFTFNEEHISGETYAEYLQVVANHYELNIFENTVVTNISADDAY-Y-TIATTT-------- 127 (369)
T ss_dssp GTCC----CTTCSSTTCCHHHHHCCSSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSS-E-EEEESS--------
T ss_pred CCch----hhhhccccccccccccccCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCe-E-EEEeCC--------
Confidence 0000 000000000 000112456788888998999999999999999999877643 2 466554
Q ss_pred cccccccceEEEcCEEEEecCCCC
Q 006466 262 KKENFQRGVELRGRITLLAEGCRG 285 (644)
Q Consensus 262 ~~~~~~~g~~i~a~~vV~A~G~~s 285 (644)
| ++.+|.||+|+|.++
T Consensus 128 -------g-~~~~d~vVlAtG~~~ 143 (369)
T 3d1c_A 128 -------E-TYHADYIFVATGDYN 143 (369)
T ss_dssp -------C-CEEEEEEEECCCSTT
T ss_pred -------C-EEEeCEEEECCCCCC
Confidence 3 589999999999875
No 103
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.06 E-value=3.7e-10 Score=117.57 Aligned_cols=115 Identities=20% Similarity=0.267 Sum_probs=82.2
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcC----CCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeec
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEK----GAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPV 181 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk----~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~ 181 (644)
+.+||+||||||+|+++|+.|++. |++|+|||+ ...+++......
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~------g~~v~lie~~~~~~~~~gg~~~~~~------------------------- 55 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARA------ELKPLLFEGWMANDIAPGGQLTTTT------------------------- 55 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT------TCCCEEECCSSBTTBCTTCGGGGCS-------------------------
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC------CCeEEEEeccCccccCCCceeeecc-------------------------
Confidence 358999999999999999999999 999999998 333333210000
Q ss_pred cCCcEEEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCC
Q 006466 182 SSDKFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGS 261 (644)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~ 261 (644)
.. ..+|.. ...+.+..+.+.|.+.+++.|++++.++ |+++..++++ + .|.+ +
T Consensus 56 ---~~--------~~~~~~-----~~~~~~~~~~~~l~~~~~~~gv~~~~~~-v~~i~~~~~~-~-~v~~-~-------- 107 (333)
T 1vdc_A 56 ---DV--------ENFPGF-----PEGILGVELTDKFRKQSERFGTTIFTET-VTKVDFSSKP-F-KLFT-D-------- 107 (333)
T ss_dssp ---EE--------CCSTTC-----TTCEEHHHHHHHHHHHHHHTTCEEECCC-CCEEECSSSS-E-EEEC-S--------
T ss_pred ---cc--------ccCCCC-----ccCCCHHHHHHHHHHHHHHCCCEEEEeE-EEEEEEcCCE-E-EEEE-C--------
Confidence 00 001100 0125677889999999999999999987 8888766533 3 4555 4
Q ss_pred cccccccceEEEcCEEEEecCCCCc
Q 006466 262 KKENFQRGVELRGRITLLAEGCRGS 286 (644)
Q Consensus 262 ~~~~~~~g~~i~a~~vV~A~G~~s~ 286 (644)
|.++++|.||+|+|.++.
T Consensus 108 -------~~~~~~~~vv~A~G~~~~ 125 (333)
T 1vdc_A 108 -------SKAILADAVILAIGAVAK 125 (333)
T ss_dssp -------SEEEEEEEEEECCCEEEC
T ss_pred -------CcEEEcCEEEECCCCCcC
Confidence 568999999999998764
No 104
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.05 E-value=7.4e-10 Score=116.00 Aligned_cols=138 Identities=20% Similarity=0.268 Sum_probs=81.3
Q ss_pred ccEEEECCCHHHHHHHHHHHh---hchhcCCCCeEEEEcCCCCCCCcccccC-------c-------c--ChH---HHHH
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQ---LCREKNVDLSVCVVEKGAEVGAHIISGN-------V-------F--EPR---ALNE 165 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~---~~~~~~~G~~V~viEk~~~~g~~~~~g~-------~-------i--~~~---~l~~ 165 (644)
+||+|||||++|+++|+.|++ . |++|+||||++.+|+...+.. . + .+. .+.+
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~------G~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~ 75 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSG------PLYLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQR 75 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-C------CEEEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHH
T ss_pred CcEEEECCcHHHHHHHHHHHhhccC------CceEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHH
Confidence 589999999999999999999 7 999999999988776432110 0 0 111 2233
Q ss_pred HhhhhhhcCCCeeeeccCCcEEEeccCCccccCCCCCCCCcEEEc--HHHHHHHHHHHHHhcCCEEecCceEEEEEEcCC
Q 006466 166 LLPQWKQEEAPIRVPVSSDKFWFLTKDRAFSLPSPFSNRGNYVIS--LSQLVRWLGGKAEELGVEIYPGFAASEILYDAD 243 (644)
Q Consensus 166 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~ 243 (644)
++..|...+..... ... . ..... ......|... ...+.+.|. ++.|++|+++++|++|..+++
T Consensus 76 ~~~~~~~~g~~~~~--~~~-~------~~~~~---~~~~~~~~~~~g~~~l~~~l~---~~~g~~i~~~~~V~~i~~~~~ 140 (342)
T 3qj4_A 76 FYDELLAYGVLRPL--SSP-I------EGMVM---KEGDCNFVAPQGISSIIKHYL---KESGAEVYFRHRVTQINLRDD 140 (342)
T ss_dssp HHHHHHHTTSCEEC--CSC-E------ETCCC-----CCEEEECTTCTTHHHHHHH---HHHTCEEESSCCEEEEEECSS
T ss_pred HHHHHHhCCCeecC--chh-h------cceec---cCCccceecCCCHHHHHHHHH---HhcCCEEEeCCEEEEEEEcCC
Confidence 34444332111000 000 0 00000 0000111111 133444444 334899999999999998775
Q ss_pred CcEEEEEeCcCccccCCCcccccccceEEEcCEEEEecCC
Q 006466 244 NKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGC 283 (644)
Q Consensus 244 g~v~gV~~~d~g~~~~G~~~~~~~~g~~i~a~~vV~A~G~ 283 (644)
+ + .|++.+ |.++.+|.||+|+..
T Consensus 141 ~-~-~v~~~~---------------g~~~~ad~vV~A~p~ 163 (342)
T 3qj4_A 141 K-W-EVSKQT---------------GSPEQFDLIVLTMPV 163 (342)
T ss_dssp S-E-EEEESS---------------SCCEEESEEEECSCH
T ss_pred E-E-EEEECC---------------CCEEEcCEEEECCCH
Confidence 4 3 477655 556899999999974
No 105
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.05 E-value=5e-10 Score=116.49 Aligned_cols=120 Identities=19% Similarity=0.259 Sum_probs=84.4
Q ss_pred cccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCC----CCCCcccccCccChHHHHHHhhhhhhcCCCeeee
Q 006466 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA----EVGAHIISGNVFEPRALNELLPQWKQEEAPIRVP 180 (644)
Q Consensus 105 ~~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~----~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~ 180 (644)
.+.+||+|||||++|+++|+.|++. |++|+|||+.+ .+|+......
T Consensus 20 ~~~~~vvIIG~G~aGl~aA~~l~~~------g~~v~vie~~~~~~~~~gg~~~~~~------------------------ 69 (338)
T 3itj_A 20 HVHNKVTIIGSGPAAHTAAIYLARA------EIKPILYEGMMANGIAAGGQLTTTT------------------------ 69 (338)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHT------TCCCEEECCSSBTTBCTTCGGGGSS------------------------
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHC------CCCEEEEecCCCCCCCcCcccccch------------------------
Confidence 4568999999999999999999999 99999999965 4443211000
Q ss_pred ccCCcEEEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCC
Q 006466 181 VSSDKFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDG 260 (644)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G 260 (644)
. ...+|.. ...+.+..+...|.+.+++.|++++.++ |+++..+++ .+ .+.+..
T Consensus 70 ----~--------~~~~~~~-----~~~~~~~~~~~~~~~~~~~~gv~i~~~~-v~~i~~~~~-~~-~v~~~~------- 122 (338)
T 3itj_A 70 ----E--------IENFPGF-----PDGLTGSELMDRMREQSTKFGTEIITET-VSKVDLSSK-PF-KLWTEF------- 122 (338)
T ss_dssp ----E--------ECCSTTC-----TTCEEHHHHHHHHHHHHHHTTCEEECSC-EEEEECSSS-SE-EEEETT-------
T ss_pred ----h--------hcccCCC-----cccCCHHHHHHHHHHHHHHcCCEEEEeE-EEEEEEcCC-EE-EEEEEe-------
Confidence 0 0001100 1125678899999999999999999998 989877653 33 455531
Q ss_pred CcccccccceEEEcCEEEEecCCCCc
Q 006466 261 SKKENFQRGVELRGRITLLAEGCRGS 286 (644)
Q Consensus 261 ~~~~~~~~g~~i~a~~vV~A~G~~s~ 286 (644)
-.++.++.+|.||+|+|.++.
T Consensus 123 -----~~~~~~~~~d~vvlAtG~~~~ 143 (338)
T 3itj_A 123 -----NEDAEPVTTDAIILATGASAK 143 (338)
T ss_dssp -----CSSSCCEEEEEEEECCCEEEC
T ss_pred -----cCCCcEEEeCEEEECcCCCcC
Confidence 011467899999999998654
No 106
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=99.04 E-value=4.7e-10 Score=115.50 Aligned_cols=115 Identities=27% Similarity=0.340 Sum_probs=82.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcE
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (644)
+|||+||||||||+++|+.|++. |++|+|||+. +|+.+.... .+
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~------g~~v~li~~~--~gG~~~~~~----------------------------~~ 44 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARK------GIRTGLMGER--FGGQILDTV----------------------------DI 44 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTT------TCCEEEECSS--TTGGGGGCC----------------------------EE
T ss_pred CCCEEEECcCHHHHHHHHHHHHC------CCcEEEEeCC--CCceecccc----------------------------cc
Confidence 37999999999999999999999 9999999863 444221000 00
Q ss_pred EEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCC-CcEEEEEeCcCccccCCCcccc
Q 006466 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDAD-NKVIGIGTNDMGIAKDGSKKEN 265 (644)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~-g~v~gV~~~d~g~~~~G~~~~~ 265 (644)
. .++. .....+..+.+.|.+.+++.|++++.+++|+.+..+.+ +..+.|.+.+
T Consensus 45 ~--------~~~~------~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~------------ 98 (310)
T 1fl2_A 45 E--------NYIS------VPKTEGQKLAGALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETAS------------ 98 (310)
T ss_dssp C--------CBTT------BSSEEHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETT------------
T ss_pred c--------cccC------cCCCCHHHHHHHHHHHHHHcCCeEEccCEEEEEEecccCCceEEEEECC------------
Confidence 0 0000 00135677888899999999999999999999876532 2234576655
Q ss_pred cccceEEEcCEEEEecCCCCc
Q 006466 266 FQRGVELRGRITLLAEGCRGS 286 (644)
Q Consensus 266 ~~~g~~i~a~~vV~A~G~~s~ 286 (644)
|.++.+|.||+|+|.++.
T Consensus 99 ---g~~~~~~~lv~AtG~~~~ 116 (310)
T 1fl2_A 99 ---GAVLKARSIIVATGAKWR 116 (310)
T ss_dssp ---SCEEEEEEEEECCCEEEC
T ss_pred ---CCEEEeCEEEECcCCCcC
Confidence 567999999999998653
No 107
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.04 E-value=6.7e-10 Score=114.98 Aligned_cols=115 Identities=23% Similarity=0.267 Sum_probs=81.5
Q ss_pred ccccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccC
Q 006466 104 ESMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSS 183 (644)
Q Consensus 104 ~~~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~ 183 (644)
+.+.+||+|||||+||+++|+.|++. |++|+|||+. .+|+.+.....+
T Consensus 13 m~~~~dvvIIG~G~aGl~aA~~l~~~------g~~v~lie~~-~~gg~~~~~~~~------------------------- 60 (319)
T 3cty_A 13 KERDFDVVIVGAGAAGFSAAVYAARS------GFSVAILDKA-VAGGLTAEAPLV------------------------- 60 (319)
T ss_dssp -CCEEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESS-STTGGGGGCSCB-------------------------
T ss_pred ccCCCcEEEECcCHHHHHHHHHHHhC------CCcEEEEeCC-CCCccccccchh-------------------------
Confidence 34579999999999999999999999 9999999994 455432111000
Q ss_pred CcEEEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcc
Q 006466 184 DKFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKK 263 (644)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~ 263 (644)
..+|.. ..+.+..+.+.|.+.+++.|++++. .+|+++..+++ .+ .|.+.
T Consensus 61 -----------~~~~~~------~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~~-~~-~v~~~----------- 109 (319)
T 3cty_A 61 -----------ENYLGF------KSIVGSELAKLFADHAANYAKIREG-VEVRSIKKTQG-GF-DIETN----------- 109 (319)
T ss_dssp -----------CCBTTB------SSBCHHHHHHHHHHHHHTTSEEEET-CCEEEEEEETT-EE-EEEES-----------
T ss_pred -----------hhcCCC------cccCHHHHHHHHHHHHHHcCCEEEE-eeEEEEEEeCC-EE-EEEEC-----------
Confidence 000100 0134567788888889999999988 67989887653 22 35553
Q ss_pred cccccceEEEcCEEEEecCCCCc
Q 006466 264 ENFQRGVELRGRITLLAEGCRGS 286 (644)
Q Consensus 264 ~~~~~g~~i~a~~vV~A~G~~s~ 286 (644)
+.++.+|.||+|+|.++.
T Consensus 110 -----~~~~~~~~li~AtG~~~~ 127 (319)
T 3cty_A 110 -----DDTYHAKYVIITTGTTHK 127 (319)
T ss_dssp -----SSEEEEEEEEECCCEEEC
T ss_pred -----CCEEEeCEEEECCCCCcc
Confidence 357999999999998653
No 108
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=99.03 E-value=4.4e-09 Score=116.86 Aligned_cols=71 Identities=24% Similarity=0.310 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcE--EEEEeCcCccccCCCcccccccce-EEEcCEEEEecCCCCcch
Q 006466 212 SQLVRWLGGKAEELGVEIYPGFAASEILYDADNKV--IGIGTNDMGIAKDGSKKENFQRGV-ELRGRITLLAEGCRGSLS 288 (644)
Q Consensus 212 ~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v--~gV~~~d~g~~~~G~~~~~~~~g~-~i~a~~vV~A~G~~s~l~ 288 (644)
..+.+.|.+.+++.||+|+++++|+++..++++.+ +.|++.+ |. ++.+|.||.|+|.++...
T Consensus 255 ~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~---------------G~~~i~aD~Vv~A~G~~p~~~ 319 (523)
T 1mo9_A 255 NETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPN---------------GEMRIETDFVFLGLGEQPRSA 319 (523)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETT---------------EEEEEECSCEEECCCCEECCH
T ss_pred HHHHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECC---------------CcEEEEcCEEEECcCCccCCc
Confidence 45677888888999999999999999987665654 3566654 55 799999999999998754
Q ss_pred HHHHHHcCCC
Q 006466 289 EKLIKNFKLR 298 (644)
Q Consensus 289 ~~l~~~~~~~ 298 (644)
. +.+..++.
T Consensus 320 ~-~l~~~gl~ 328 (523)
T 1mo9_A 320 E-LAKILGLD 328 (523)
T ss_dssp H-HHHHHTCC
T ss_pred c-CHHHcCCc
Confidence 3 55566665
No 109
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=99.00 E-value=1.4e-09 Score=113.52 Aligned_cols=115 Identities=23% Similarity=0.293 Sum_probs=81.5
Q ss_pred cccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCC
Q 006466 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSD 184 (644)
Q Consensus 105 ~~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~ 184 (644)
.+.+||+|||||++|+++|+.|++. |++|+|||+. .+|+.+.....+
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~------g~~v~lie~~-~~gg~~~~~~~~-------------------------- 58 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARA------QLAPLVFEGT-SFGGALMTTTDV-------------------------- 58 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHT------TCCCEEECCS-SCSCGGGSCSCB--------------------------
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhC------CCeEEEEecC-CCCCceeccchh--------------------------
Confidence 3468999999999999999999999 9999999975 445422100000
Q ss_pred cEEEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEE-EeCcCccccCCCcc
Q 006466 185 KFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGI-GTNDMGIAKDGSKK 263 (644)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV-~~~d~g~~~~G~~~ 263 (644)
..+|.. ...+.+..+.+.|.+.+++.|++++.++ |+++.. ++.. .| .+.+
T Consensus 59 ----------~~~~~~-----~~~~~~~~~~~~l~~~~~~~~v~~~~~~-v~~i~~-~~~~--~v~~~~~---------- 109 (335)
T 2a87_A 59 ----------ENYPGF-----RNGITGPELMDEMREQALRFGADLRMED-VESVSL-HGPL--KSVVTAD---------- 109 (335)
T ss_dssp ----------CCSTTC-----TTCBCHHHHHHHHHHHHHHTTCEEECCC-EEEEEC-SSSS--EEEEETT----------
T ss_pred ----------hhcCCC-----CCCCCHHHHHHHHHHHHHHcCCEEEEee-EEEEEe-CCcE--EEEEeCC----------
Confidence 000100 0114567888889888999999999997 888876 3222 34 5544
Q ss_pred cccccceEEEcCEEEEecCCCCc
Q 006466 264 ENFQRGVELRGRITLLAEGCRGS 286 (644)
Q Consensus 264 ~~~~~g~~i~a~~vV~A~G~~s~ 286 (644)
|.++.+|.||+|+|.++.
T Consensus 110 -----g~~~~~d~lviAtG~~~~ 127 (335)
T 2a87_A 110 -----GQTHRARAVILAMGAAAR 127 (335)
T ss_dssp -----SCEEEEEEEEECCCEEEC
T ss_pred -----CCEEEeCEEEECCCCCcc
Confidence 568999999999998764
No 110
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.00 E-value=3e-10 Score=124.21 Aligned_cols=151 Identities=21% Similarity=0.224 Sum_probs=88.7
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCC-----CeEEEEcCCCCCCCccc---ccCccChHHHHHHhhhhhhcCCCe
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVD-----LSVCVVEKGAEVGAHII---SGNVFEPRALNELLPQWKQEEAPI 177 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G-----~~V~viEk~~~~g~~~~---~g~~i~~~~l~~l~~~~~~~~~~~ 177 (644)
..+||||||||+||+++|+.|++. | ++|+|||+.+.+|.+.. .+..+....+.++ .....|
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~------g~~~~~~~v~liE~~~~~g~~~~~~~~~~~~~~~~~~~l----~~~~~p- 97 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQER------AQAQGALEVLFLDKQGDYRWHGNTLVSQSELQISFLKDL----VSLRNP- 97 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHH------HHHHCCCCEEEEESCSSCCSSGGGCCSSCBCSSCTTSSS----STTTCT-
T ss_pred CcCCEEEECCCHHHHHHHHHHHhc------ccccCcccEEEEecCCCCCCcCCCCCCCCcCCcchhhcc----ccccCC-
Confidence 358999999999999999999999 8 99999999998774321 1111100000000 000000
Q ss_pred eeeccCCcE-EEeccCC-ccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCC-CcEE--EEEeC
Q 006466 178 RVPVSSDKF-WFLTKDR-AFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDAD-NKVI--GIGTN 252 (644)
Q Consensus 178 ~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~-g~v~--gV~~~ 252 (644)
.....+ .++.... ...++ ....+...+..+.++|...+++.|++++++++|+++..+++ +..+ .|.+.
T Consensus 98 ---~~~~~~~~~l~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~ 170 (463)
T 3s5w_A 98 ---TSPYSFVNYLHKHDRLVDFI----NLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISR 170 (463)
T ss_dssp ---TCTTSHHHHHHHTTCHHHHH----HHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEE
T ss_pred ---CCCCChhHhhhhcCceeecc----cccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEe
Confidence 000000 0000000 00000 01122356888999999999888999999999999987622 3332 45554
Q ss_pred cCccccCCCcccccccceEEEcCEEEEecCCCC
Q 006466 253 DMGIAKDGSKKENFQRGVELRGRITLLAEGCRG 285 (644)
Q Consensus 253 d~g~~~~G~~~~~~~~g~~i~a~~vV~A~G~~s 285 (644)
+ .+|+ ..++.+|.||+|+|..+
T Consensus 171 ~----g~g~-------~~~~~~d~lVlAtG~~p 192 (463)
T 3s5w_A 171 N----ADGE-------ELVRTTRALVVSPGGTP 192 (463)
T ss_dssp E----TTSC-------EEEEEESEEEECCCCEE
T ss_pred c----CCCc-------eEEEEeCEEEECCCCCC
Confidence 4 1111 13799999999999754
No 111
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.99 E-value=6.2e-10 Score=122.26 Aligned_cols=148 Identities=23% Similarity=0.251 Sum_probs=85.7
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCc
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDK 185 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~ 185 (644)
..+||+||||||+|+++|+.|++. |++|+|||+.+.+|+.+.+.++++.+.+......+..... ......
T Consensus 4 ~~~dVvIIGgG~aGl~aA~~l~~~------G~~V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~----~~~~~g 73 (478)
T 1v59_A 4 KSHDVVIIGGGPAGYVAAIKAAQL------GFNTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHT----EAQKRG 73 (478)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHH----TSGGGT
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC------CCeEEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHH----HHHhcC
Confidence 468999999999999999999999 9999999998889988777777766554322111111000 000000
Q ss_pred EEEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccc
Q 006466 186 FWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKEN 265 (644)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~ 265 (644)
+... ....+++....... .. ....+...+.+.+++.|++++.++.+. .++ + .+.|.+.+ |.
T Consensus 74 i~~~-~~~~~~~~~~~~~~-~~--~~~~l~~~~~~~~~~~gv~~~~g~~~~---~~~-~-~v~V~~~~------G~---- 134 (478)
T 1v59_A 74 IDVN-GDIKINVANFQKAK-DD--AVKQLTGGIELLFKKNKVTYYKGNGSF---EDE-T-KIRVTPVD------GL---- 134 (478)
T ss_dssp EEEC-SCEEECHHHHHHHH-HH--HHHHHHHHHHHHHHHTTCEEEESEEEE---SSS-S-EEEEECCT------TC----
T ss_pred cccC-CCCccCHHHHHHHH-HH--HHHHHHHHHHHHHHhCCCEEEEEEEEE---ccC-C-eEEEEecC------CC----
Confidence 1000 00000000000000 00 012334445666777899999998763 232 3 33465543 21
Q ss_pred cccceE------EEcCEEEEecCCCC
Q 006466 266 FQRGVE------LRGRITLLAEGCRG 285 (644)
Q Consensus 266 ~~~g~~------i~a~~vV~A~G~~s 285 (644)
..+ +++|.||+|+|.++
T Consensus 135 ---~~~~~~~~~i~~d~lViAtGs~p 157 (478)
T 1v59_A 135 ---EGTVKEDHILDVKNIIVATGSEV 157 (478)
T ss_dssp ---TTCCSSCEEEEEEEEEECCCEEE
T ss_pred ---cccccccceEEeCEEEECcCCCC
Confidence 134 99999999999876
No 112
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.98 E-value=1.5e-09 Score=112.27 Aligned_cols=114 Identities=18% Similarity=0.261 Sum_probs=80.6
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCc
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDK 185 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~ 185 (644)
+.+||+||||||||+++|+.|++. |++|+|||+. .+|+.......+
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~------g~~v~lie~~-~~gg~~~~~~~~--------------------------- 49 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAARA------NLQPVLITGM-EKGGQLTTTTEV--------------------------- 49 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTT------TCCCEEECCS-STTGGGGGCSBC---------------------------
T ss_pred CcCCEEEECcCHHHHHHHHHHHHC------CCcEEEEccC-CCCceEecchhh---------------------------
Confidence 468999999999999999999999 9999999975 455422100000
Q ss_pred EEEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccc
Q 006466 186 FWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKEN 265 (644)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~ 265 (644)
..+|.. ...+.+..+.+++.+.+++.|++++.++ ++.+..+++ .+ .| +.+
T Consensus 50 ---------~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~i~~~~~-~~-~v-~~~------------ 99 (320)
T 1trb_A 50 ---------ENWPGD-----PNDLTGPLLMERMHEHATKFETEIIFDH-INKVDLQNR-PF-RL-NGD------------ 99 (320)
T ss_dssp ---------CCSTTC-----CSSCBHHHHHHHHHHHHHHTTCEEECCC-EEEEECSSS-SE-EE-EES------------
T ss_pred ---------hhCCCC-----CCCCCHHHHHHHHHHHHHHCCCEEEEee-eeEEEecCC-EE-EE-EeC------------
Confidence 000100 0014567888888889999999999986 888876553 33 34 333
Q ss_pred cccceEEEcCEEEEecCCCCc
Q 006466 266 FQRGVELRGRITLLAEGCRGS 286 (644)
Q Consensus 266 ~~~g~~i~a~~vV~A~G~~s~ 286 (644)
+.++.+|.||+|+|.++.
T Consensus 100 ---~~~~~~~~lv~AtG~~~~ 117 (320)
T 1trb_A 100 ---NGEYTCDALIIATGASAR 117 (320)
T ss_dssp ---SCEEEEEEEEECCCEEEC
T ss_pred ---CCEEEcCEEEECCCCCcC
Confidence 467999999999998754
No 113
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.98 E-value=1.4e-10 Score=128.87 Aligned_cols=146 Identities=17% Similarity=0.253 Sum_probs=85.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCC--------CCCCcccccCccChHHHHHH---hhhhhhcCC
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA--------EVGAHIISGNVFEPRALNEL---LPQWKQEEA 175 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~--------~~g~~~~~g~~i~~~~l~~l---~~~~~~~~~ 175 (644)
+||||||||||||++||+.++++ |.+|+|||+.. .+|+.|++-+|++++.|... .........
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~------G~kValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~~~~~ 115 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAH------GARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSK 115 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTT------TCCEEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHHHTGG
T ss_pred CCCEEEECCCHHHHHHHHHHHHC------CCeEEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHHHHhhhH
Confidence 69999999999999999999999 99999999753 47899999999998877432 222211100
Q ss_pred CeeeeccCCcEEEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCc
Q 006466 176 PIRVPVSSDKFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMG 255 (644)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g 255 (644)
.. .+.. ....++++..+..... ....+.......+++.||+++.+... +. +. ..+ .|...+
T Consensus 116 ~~-------Gi~~--~~~~~d~~~~~~~~~~---~v~~l~~~~~~~l~~~~V~~i~G~a~--f~-~~-~~v-~V~~~~-- 176 (542)
T 4b1b_A 116 AY-------GWKF--DNLKHDWKKLVTTVQS---HIRSLNFSYMTGLRSSKVKYINGLAK--LK-DK-NTV-SYYLKG-- 176 (542)
T ss_dssp GG-------TEEE--EEEEECHHHHHHHHHH---HHHHHHHHHHHHHHHTTCEEECEEEE--EE-ET-TEE-EEEEC---
T ss_pred hc-------Cccc--CcccccHHHHHHHHHH---HHHHHHHHHHHHHHhCCCEEEeeeEE--Ec-CC-Ccc-eEeecc--
Confidence 00 0000 0000111100000000 00222333444567789999987643 22 22 333 344332
Q ss_pred cccCCCcccccccceEEEcCEEEEecCCCCc
Q 006466 256 IAKDGSKKENFQRGVELRGRITLLAEGCRGS 286 (644)
Q Consensus 256 ~~~~G~~~~~~~~g~~i~a~~vV~A~G~~s~ 286 (644)
..+ .+.++++|.+|+|||.++.
T Consensus 177 --~~~-------~~~~i~a~~iiIATGs~P~ 198 (542)
T 4b1b_A 177 --DLS-------KEETVTGKYILIATGCRPH 198 (542)
T ss_dssp ---CC-------CEEEEEEEEEEECCCEEEC
T ss_pred --cCC-------ceEEEeeeeEEeccCCCCC
Confidence 111 1468999999999998875
No 114
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=98.98 E-value=6.4e-08 Score=105.93 Aligned_cols=40 Identities=33% Similarity=0.556 Sum_probs=37.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCC--CeEEEEcCCCCCCCcc
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVD--LSVCVVEKGAEVGAHI 152 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G--~~V~viEk~~~~g~~~ 152 (644)
.+||+|||||++||++|+.|++. | ++|+|+|+.+.+|+.+
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~------g~~~~v~v~E~~~~~GG~~ 45 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERA------FPDLNITLLEAGERLGGKV 45 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHH------CTTSEEEEECSSSSSBTTC
T ss_pred cccEEEECCCHHHHHHHHHHHHh------CCCCCEEEEECCCCCCcee
Confidence 47999999999999999999999 8 9999999999888754
No 115
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.96 E-value=4.2e-10 Score=123.26 Aligned_cols=132 Identities=19% Similarity=0.301 Sum_probs=84.5
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhh---hhhcCCCeeeecc
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQ---WKQEEAPIRVPVS 182 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~---~~~~~~~~~~~~~ 182 (644)
++|||+||||||||+++|+.|++. |++|+||||.+.+|+.+...++++.+.+...... +.....
T Consensus 3 ~~~DVvVIGgG~aGl~aA~~l~~~------G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~------- 69 (466)
T 3l8k_A 3 LKYDVVVIGAGGAGYHGAFRLAKA------KYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIAN------- 69 (466)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT------TCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHC-------
T ss_pred ccceEEEECCCHHHHHHHHHHHhC------CCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhccc-------
Confidence 469999999999999999999999 9999999999999998877777766655332211 111000
Q ss_pred CCcEEEeccCCccccCCCCCCCCcEEEcHHH---HH--HHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccc
Q 006466 183 SDKFWFLTKDRAFSLPSPFSNRGNYVISLSQ---LV--RWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIA 257 (644)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~---l~--~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~ 257 (644)
....++++ .+.-.... +. ..+.+.+++.|++++.+ .++.+. . + .+.|.+.+
T Consensus 70 --------~~~~~~~~-------~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g-~v~~id--~-~-~~~V~~~~---- 125 (466)
T 3l8k_A 70 --------VKIPLDFS-------TVQDRKDYVQELRFKQHKRNMSQYETLTFYKG-YVKIKD--P-T-HVIVKTDE---- 125 (466)
T ss_dssp --------SCCCCCHH-------HHHHHHHHHHHHHHHHHHHHHTTCTTEEEESE-EEEEEE--T-T-EEEEEETT----
T ss_pred --------CCCCcCHH-------HHHHHHHhheeccccchHHHHHHhCCCEEEEe-EEEEec--C-C-eEEEEcCC----
Confidence 00000000 00001111 22 45555566679999888 465553 2 2 23466544
Q ss_pred cCCCcccccccceE--EEcCEEEEecCCCC
Q 006466 258 KDGSKKENFQRGVE--LRGRITLLAEGCRG 285 (644)
Q Consensus 258 ~~G~~~~~~~~g~~--i~a~~vV~A~G~~s 285 (644)
|.+ +.+|.+|+|+|..+
T Consensus 126 -----------g~~~~~~~d~lviAtG~~p 144 (466)
T 3l8k_A 126 -----------GKEIEAETRYMIIASGAET 144 (466)
T ss_dssp -----------SCEEEEEEEEEEECCCEEE
T ss_pred -----------CcEEEEecCEEEECCCCCc
Confidence 456 99999999999754
No 116
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.96 E-value=4.5e-10 Score=123.83 Aligned_cols=54 Identities=37% Similarity=0.645 Sum_probs=46.3
Q ss_pred cccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHH
Q 006466 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALN 164 (644)
Q Consensus 105 ~~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~ 164 (644)
++.+||+||||||||+++|+.|++. |++|+||||.+.+|+.+...++++.+.+.
T Consensus 23 m~~~dVvVIGgG~aGl~aA~~la~~------G~~V~liEk~~~~GG~~~~~gciP~k~l~ 76 (491)
T 3urh_A 23 MMAYDLIVIGSGPGGYVCAIKAAQL------GMKVAVVEKRSTYGGTCLNVGCIPSKALL 76 (491)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHT------TCCEEEEESSSSSSHHHHHHSHHHHHHHH
T ss_pred cccCCEEEECCCHHHHHHHHHHHHC------CCeEEEEecCCCCCCccccccchhhHHHH
Confidence 4579999999999999999999999 99999999999999988877787766553
No 117
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.95 E-value=3.5e-10 Score=123.85 Aligned_cols=143 Identities=23% Similarity=0.237 Sum_probs=84.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcE
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (644)
++||+||||||||+++|+.|++. |++|+|||+. .+|+.+.+.++++.+.+......+.... .......+
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~------G~~V~liE~~-~~gG~~~~~g~~psk~ll~~~~~~~~~~----~~~~~~g~ 71 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQL------GLSTAIVEPK-YWGGVCLNVGCIPSKALLRNAELVHIFT----KDAKAFGI 71 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSS-CTTHHHHHHSHHHHHHHHHHHHHHHHHH----HHTTTTTE
T ss_pred cCCEEEECCCHHHHHHHHHHHhC------CCeEEEEeCC-CCCCcccccCchhhHHHHHHHHHHHHHH----HHHHhcCC
Confidence 58999999999999999999999 9999999998 6777666656666554432211111100 00000000
Q ss_pred EEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCccccc
Q 006466 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (644)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~ 266 (644)
. ....++++...... .. ....+.+.+.+.+++.|++++.++.+. .++ +. +.|.+.+
T Consensus 72 ~---~~~~~~~~~~~~~~-~~--~~~~l~~~l~~~~~~~gv~~~~g~~~~---id~-~~-v~V~~~~------------- 127 (464)
T 2a8x_A 72 S---GEVTFDYGIAYDRS-RK--VAEGRVAGVHFLMKKNKITEIHGYGTF---ADA-NT-LLVDLND------------- 127 (464)
T ss_dssp E---ECCEECHHHHHHHH-HH--HHHHHHHHHHHHHHHTTCEEECEEEEE---SSS-SE-EEEEETT-------------
T ss_pred C---CCCccCHHHHHHHH-HH--HHHHHHHHHHHHHHhCCCEEEEeEEEE---ecC-Ce-EEEEeCC-------------
Confidence 0 00001110000000 00 013445566777778899999987653 233 33 3465544
Q ss_pred ccc--eEEEcCEEEEecCCCCc
Q 006466 267 QRG--VELRGRITLLAEGCRGS 286 (644)
Q Consensus 267 ~~g--~~i~a~~vV~A~G~~s~ 286 (644)
| .++.+|.||+|+|.++.
T Consensus 128 --G~~~~~~~d~lViAtG~~~~ 147 (464)
T 2a8x_A 128 --GGTESVTFDNAIIATGSSTR 147 (464)
T ss_dssp --SCCEEEEEEEEEECCCEEEC
T ss_pred --CceEEEEcCEEEECCCCCCC
Confidence 4 67999999999998764
No 118
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.95 E-value=6.9e-10 Score=122.08 Aligned_cols=53 Identities=34% Similarity=0.562 Sum_probs=45.6
Q ss_pred cccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHH
Q 006466 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRAL 163 (644)
Q Consensus 105 ~~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l 163 (644)
.+++||||||||+||+++|+.|++. |++|+|||+.+.+|+.+.+.++++.+.+
T Consensus 4 ~~~~dVvIIGaG~aGl~aA~~l~~~------G~~V~liE~~~~~GG~~~~~g~~psk~l 56 (482)
T 1ojt_A 4 DAEYDVVVLGGGPGGYSAAFAAADE------GLKVAIVERYKTLGGVCLNVGCIPSKAL 56 (482)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESSSCSSHHHHHHSHHHHHHH
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhC------CCeEEEEeCCCCCCCceeeecccchHHH
Confidence 3468999999999999999999999 9999999998888887776667665544
No 119
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.95 E-value=1.6e-09 Score=120.18 Aligned_cols=117 Identities=25% Similarity=0.405 Sum_probs=84.0
Q ss_pred cccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCC
Q 006466 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSD 184 (644)
Q Consensus 105 ~~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~ 184 (644)
...+||+||||||||+++|+.|++. |++|+|+|+. +|+.+.....+ .
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~~------G~~v~lie~~--~GG~~~~~~~~-------------------------~ 256 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSARK------GIRTGLMGER--FGGQVLDTVDI-------------------------E 256 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSS--TTGGGTTCSCB-------------------------C
T ss_pred cCcccEEEECCcHHHHHHHHHHHhC------CCeEEEEECC--CCCcccccccc-------------------------c
Confidence 3468999999999999999999999 9999999963 45432110000 0
Q ss_pred cEEEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCC-CcEEEEEeCcCccccCCCcc
Q 006466 185 KFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDAD-NKVIGIGTNDMGIAKDGSKK 263 (644)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~-g~v~gV~~~d~g~~~~G~~~ 263 (644)
. + ..++ ...+..+.+.|.+.+++.|++++.+++|+++..+.+ +..+.|.+.+
T Consensus 257 ~--~------~~~~---------~~~~~~l~~~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~---------- 309 (521)
T 1hyu_A 257 N--Y------ISVP---------KTEGQKLAGALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETAS---------- 309 (521)
T ss_dssp C--B------TTBS---------SBCHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETT----------
T ss_pred c--c------CCCC---------CCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECC----------
Confidence 0 0 0000 134677888899999999999999999999975422 2234577655
Q ss_pred cccccceEEEcCEEEEecCCCCc
Q 006466 264 ENFQRGVELRGRITLLAEGCRGS 286 (644)
Q Consensus 264 ~~~~~g~~i~a~~vV~A~G~~s~ 286 (644)
|.++++|.||+|+|.++.
T Consensus 310 -----g~~~~~d~vVlAtG~~~~ 327 (521)
T 1hyu_A 310 -----GAVLKARSIIIATGAKWR 327 (521)
T ss_dssp -----SCEEEEEEEEECCCEEEC
T ss_pred -----CCEEEcCEEEECCCCCcC
Confidence 568999999999998653
No 120
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.93 E-value=2.6e-09 Score=117.05 Aligned_cols=141 Identities=23% Similarity=0.350 Sum_probs=85.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHH---hhhhhhcCCCeeeeccC
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNEL---LPQWKQEEAPIRVPVSS 183 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l---~~~~~~~~~~~~~~~~~ 183 (644)
.+||+|||||+||+++|+.|++. |++|+|||+.+.+|+.+.+.++++.+.+... +..+... ...
T Consensus 6 ~~dvvIIGaG~aGl~aA~~l~~~------g~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~-------~~~ 72 (470)
T 1dxl_A 6 ENDVVIIGGGPGGYVAAIKAAQL------GFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHS-------FAN 72 (470)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHH------TCCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHT-------HHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHC------CCeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHH-------HHh
Confidence 58999999999999999999999 9999999999889988776667665544221 1111100 000
Q ss_pred CcEEEeccCCccccCCCCCCCCcEEEc----HHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccC
Q 006466 184 DKFWFLTKDRAFSLPSPFSNRGNYVIS----LSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKD 259 (644)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~v~----r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~ 259 (644)
..+.. ....++++ .+.-. ...+.+.+.+.+++.|++++.++.+. .+. +. +.|.+.+
T Consensus 73 ~g~~~--~~~~~~~~-------~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~---~~~-~~-~~v~~~~------ 132 (470)
T 1dxl_A 73 HGVKV--SNVEIDLA-------AMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKF---VSP-SE-ISVDTIE------ 132 (470)
T ss_dssp HTEEE--SCEEECHH-------HHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEE---EET-TE-EEECCSS------
T ss_pred cCccc--CCCccCHH-------HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE---ecC-CE-EEEEeCC------
Confidence 00000 00000000 00000 12344445666677899999998653 233 22 2454433
Q ss_pred CCcccccccceEEEcCEEEEecCCCCcc
Q 006466 260 GSKKENFQRGVELRGRITLLAEGCRGSL 287 (644)
Q Consensus 260 G~~~~~~~~g~~i~a~~vV~A~G~~s~l 287 (644)
|+ ..++++|.||+|+|.++..
T Consensus 133 G~-------~~~i~~d~lIiAtGs~p~~ 153 (470)
T 1dxl_A 133 GE-------NTVVKGKHIIIATGSDVKS 153 (470)
T ss_dssp SC-------CEEEECSEEEECCCEEECC
T ss_pred Cc-------eEEEEcCEEEECCCCCCCC
Confidence 11 1679999999999987653
No 121
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.92 E-value=1.3e-08 Score=110.88 Aligned_cols=58 Identities=14% Similarity=0.133 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHHhcCCEEecCceEEEEEEcC-CCcEEEEEeCcCccccCCCcccccccceEEEcCEEEEecCCCC
Q 006466 212 SQLVRWLGGKAEELGVEIYPGFAASEILYDA-DNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRG 285 (644)
Q Consensus 212 ~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~-~g~v~gV~~~d~g~~~~G~~~~~~~~g~~i~a~~vV~A~G~~s 285 (644)
..+.+.|.+.+++.|++|+++++|++|..+. ++++++|++. |.++.||.||.|.|.++
T Consensus 242 ~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~~----------------g~~~~ad~VV~a~~~~~ 300 (453)
T 2bcg_G 242 GELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKTK----------------LGTFKAPLVIADPTYFP 300 (453)
T ss_dssp THHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEET----------------TEEEECSCEEECGGGCG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEEC----------------CeEEECCEEEECCCccc
Confidence 5788889999999999999999999998872 4677788763 46899999999999885
No 122
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.90 E-value=2.3e-09 Score=117.05 Aligned_cols=135 Identities=27% Similarity=0.331 Sum_probs=84.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHH---hhhhhhcCCCeeeeccC
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNEL---LPQWKQEEAPIRVPVSS 183 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l---~~~~~~~~~~~~~~~~~ 183 (644)
++||+|||||+||+++|+.|++. |++|+|||+. .+|+.+.+.++++.+.+... +..+... ..
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~------g~~V~lie~~-~~gG~~~~~g~~p~k~l~~~~~~~~~~~~~--------~~ 67 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQL------GQKVTIVEKG-NLGGVCLNVGCIPSKALISASHRYEQAKHS--------EE 67 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHT------TCCEEEEESS-CTTHHHHHTSHHHHHHHHHHHHHHHHHHTC--------GG
T ss_pred cCCEEEECCCHHHHHHHHHHHhC------CCeEEEEECC-CCCCcCcCcCchhhHHHHHHHHHHHHHHHH--------Hh
Confidence 58999999999999999999999 9999999998 67877766667665544221 1111110 00
Q ss_pred CcEEEeccCCccccCCCCCCCCcEEEcH-----HHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCcccc
Q 006466 184 DKFWFLTKDRAFSLPSPFSNRGNYVISL-----SQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAK 258 (644)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~v~r-----~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~ 258 (644)
..+.+ .....+++ ..+.+ ..+.+.+.+.+++.|++++.++.+. + ++ +. +.|.+.+
T Consensus 68 ~g~~~--~~~~~~~~--------~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-i--d~-~~-v~V~~~~----- 127 (455)
T 1ebd_A 68 MGIKA--ENVTIDFA--------KVQEWKASVVKKLTGGVEGLLKGNKVEIVKGEAYF-V--DA-NT-VRVVNGD----- 127 (455)
T ss_dssp GTEEC--CSCEECHH--------HHHHHHHHHHHHHHHHHHHHHHTTTCEEEESEEEE-E--ET-TE-EEEEETT-----
T ss_pred cCccc--CCCccCHH--------HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEE-c--cC-Ce-EEEEeCC-----
Confidence 00000 00000000 00011 2244556667778899999998653 2 33 32 3466544
Q ss_pred CCCcccccccc-eEEEcCEEEEecCCCCc
Q 006466 259 DGSKKENFQRG-VELRGRITLLAEGCRGS 286 (644)
Q Consensus 259 ~G~~~~~~~~g-~~i~a~~vV~A~G~~s~ 286 (644)
| .++.+|.+|+|+|.++.
T Consensus 128 ----------G~~~i~~d~lViATGs~p~ 146 (455)
T 1ebd_A 128 ----------SAQTYTFKNAIIATGSRPI 146 (455)
T ss_dssp ----------EEEEEECSEEEECCCEEEC
T ss_pred ----------CcEEEEeCEEEEecCCCCC
Confidence 4 57999999999998764
No 123
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.89 E-value=3.6e-09 Score=116.09 Aligned_cols=52 Identities=31% Similarity=0.575 Sum_probs=46.0
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHH
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRAL 163 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l 163 (644)
+.+||||||||+||+++|+.|++. |++|+|||+.+.+|+.+...++++.+.+
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~------g~~V~liE~~~~~GG~~~~~g~~Psk~l 56 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQL------GFKTVCIEKNETLGGTCLNVGCIPSKAL 56 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT------TCCEEEEECSSSSSHHHHHHSHHHHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC------CCeEEEEeCCCCcCCcccccCccchHHH
Confidence 468999999999999999999999 9999999999889988777777766554
No 124
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.87 E-value=9.8e-09 Score=105.49 Aligned_cols=114 Identities=21% Similarity=0.261 Sum_probs=79.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEE-EcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCc
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCV-VEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDK 185 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~v-iEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~ 185 (644)
.+||+|||||+||+++|+.|++. |++|+| +|| +.+|+.......+
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~------g~~v~li~e~-~~~gG~~~~~~~~--------------------------- 49 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRG------GLKNVVMFEK-GMPGGQITSSSEI--------------------------- 49 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH------TCSCEEEECS-SSTTGGGGGCSCB---------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHC------CCCeEEEEeC-CCCCceeeeecee---------------------------
Confidence 48999999999999999999999 999999 999 5566532211000
Q ss_pred EEEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccc
Q 006466 186 FWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKEN 265 (644)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~ 265 (644)
..+|.. ...+...++..++.+.+++.|++++.+ +|+++ .+++...+.|.+..
T Consensus 50 ---------~~~~~~-----~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v~~i-~~~~~~~~~v~~~~------------ 101 (315)
T 3r9u_A 50 ---------ENYPGV-----AQVMDGISFMAPWSEQCMRFGLKHEMV-GVEQI-LKNSDGSFTIKLEG------------ 101 (315)
T ss_dssp ---------CCSTTC-----CSCBCHHHHHHHHHHHHTTTCCEEECC-CEEEE-EECTTSCEEEEETT------------
T ss_pred ---------ccCCCC-----CCCCCHHHHHHHHHHHHHHcCcEEEEE-EEEEE-ecCCCCcEEEEEec------------
Confidence 001100 012456788999999999999999998 78888 55411122332322
Q ss_pred cccceEEEcCEEEEecCCCC
Q 006466 266 FQRGVELRGRITLLAEGCRG 285 (644)
Q Consensus 266 ~~~g~~i~a~~vV~A~G~~s 285 (644)
++ ++.+|.||+|+|..+
T Consensus 102 --~~-~~~~d~lvlAtG~~~ 118 (315)
T 3r9u_A 102 --GK-TELAKAVIVCTGSAP 118 (315)
T ss_dssp --SC-EEEEEEEEECCCEEE
T ss_pred --CC-EEEeCEEEEeeCCCC
Confidence 14 799999999999754
No 125
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.86 E-value=3.5e-09 Score=116.58 Aligned_cols=53 Identities=21% Similarity=0.416 Sum_probs=45.3
Q ss_pred cccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcC--------CCCCCCcccccCccChHHH
Q 006466 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEK--------GAEVGAHIISGNVFEPRAL 163 (644)
Q Consensus 105 ~~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk--------~~~~g~~~~~g~~i~~~~l 163 (644)
.++|||+||||||||++||+.|++. |++|+|||| ...+|+.+...+|++.+.+
T Consensus 4 ~~~~DvvVIG~G~aGl~aA~~la~~------G~~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l 64 (488)
T 3dgz_A 4 QQSFDLLVIGGGSGGLACAKEAAQL------GKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLM 64 (488)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHT------TCCEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHH
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhC------CCeEEEEEecccccccccCCcCCeecccCCcccHHH
Confidence 3479999999999999999999999 999999998 4567887777777776654
No 126
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.86 E-value=5.4e-09 Score=114.45 Aligned_cols=51 Identities=35% Similarity=0.654 Sum_probs=45.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHH
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRAL 163 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l 163 (644)
++||+|||||+||+++|+.|++. |++|+|||+.+.+|+.+...++++.+.+
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~------g~~V~lie~~~~~GG~~~~~g~~psk~l 52 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQL------GMKTACVEKRGALGGTCLNVGCIPSKAL 52 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESSSSSSHHHHHHSHHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHHC------CCeEEEEeCCCCcCCcCCCcCcHhHHHH
Confidence 58999999999999999999999 9999999999889988776667665544
No 127
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.84 E-value=3.4e-09 Score=117.57 Aligned_cols=52 Identities=25% Similarity=0.443 Sum_probs=44.7
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCC--------CCCCcccccCccChHHH
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA--------EVGAHIISGNVFEPRAL 163 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~--------~~g~~~~~g~~i~~~~l 163 (644)
.+|||+||||||||++||+.|++. |++|+||||.+ .+|+.+...++++.+.+
T Consensus 31 ~~~DVvVIGgGpaGl~aA~~la~~------G~~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l 90 (519)
T 3qfa_A 31 YDYDLIIIGGGSGGLAAAKEAAQY------GKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLM 90 (519)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHT------TCCEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC------CCeEEEEeccCccccccCCCcccccCCcCccchHHH
Confidence 469999999999999999999999 99999999964 67877777777776654
No 128
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.84 E-value=3.4e-09 Score=116.42 Aligned_cols=52 Identities=19% Similarity=0.419 Sum_probs=44.4
Q ss_pred cccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHH
Q 006466 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRAL 163 (644)
Q Consensus 105 ~~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l 163 (644)
+.++||+|||||+||+++|+.|++. |++|+||||. .+|+.+.+.++++.+.+
T Consensus 9 ~~~~dVvVIGgG~aGl~aA~~l~~~------g~~V~liE~~-~~GG~~~n~gciP~k~l 60 (479)
T 2hqm_A 9 TKHYDYLVIGGGSGGVASARRAASY------GAKTLLVEAK-ALGGTCVNVGCVPKKVM 60 (479)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHT------SCCEEEEESS-CTTHHHHHHSHHHHHHH
T ss_pred cccCCEEEEcCCHHHHHHHHHHHHC------CCcEEEEeCC-CcCCcCcccCcHHHHHH
Confidence 3468999999999999999999999 9999999997 67887777777766554
No 129
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.83 E-value=2e-08 Score=109.06 Aligned_cols=58 Identities=17% Similarity=0.162 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccccccceEEEcCEEEEecCCC
Q 006466 212 SQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCR 284 (644)
Q Consensus 212 ~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~~~g~~i~a~~vV~A~G~~ 284 (644)
..|.+.|.+.+++.|++|+++++|++|..+++|++++|++.+ |.+++||.||.|.|..
T Consensus 256 ~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~---------------G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 256 GGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSD---------------GEIAYCDKVICDPSYV 313 (475)
T ss_dssp THHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETT---------------SCEEEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECC---------------CcEEECCEEEECCCcc
Confidence 678888999999999999999999999985568889999876 6789999999999976
No 130
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.83 E-value=1.4e-09 Score=119.31 Aligned_cols=52 Identities=33% Similarity=0.544 Sum_probs=40.9
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCC------CcccccCccChHHH
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVG------AHIISGNVFEPRAL 163 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g------~~~~~g~~i~~~~l 163 (644)
++|||+|||||++|+++|+.|++. |++|+||||.+.+| +.+...++++.+.+
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~------G~~V~liEk~~~~gG~~~~GG~~~~~gciPsk~l 59 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQL------GLKTALIEKYKGKEGKTALGGTCLNVGCIPSKAL 59 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHH------TCCEEEEECCBCTTSSBCCSHHHHHHSHHHHHHH
T ss_pred CcCCEEEECcCHHHHHHHHHHHhC------CCEEEEEeCCCccCCCCCcCCccccccHHHHHHH
Confidence 369999999999999999999999 99999999997544 43333345554444
No 131
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.83 E-value=1.4e-08 Score=112.17 Aligned_cols=48 Identities=35% Similarity=0.553 Sum_probs=40.4
Q ss_pred cccccccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCccc
Q 006466 101 MCRESMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHII 153 (644)
Q Consensus 101 ~~~~~~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~ 153 (644)
|++..+.+||||||||++||+||+.|+++ .|.+|+|+|+++.+||.+.
T Consensus 4 Ms~p~~~~DVvIIGaGisGLsaA~~L~k~-----~G~~V~VlE~~~~~GG~~~ 51 (513)
T 4gde_A 4 MTHPDISVDVLVIGAGPTGLGAAKRLNQI-----DGPSWMIVDSNETPGGLAS 51 (513)
T ss_dssp --CCSEEEEEEEECCSHHHHHHHHHHHHH-----CCSCEEEEESSSSCCGGGC
T ss_pred CCCCCCCCCEEEECCcHHHHHHHHHHHhh-----CCCCEEEEECCCCCcCCee
Confidence 33445679999999999999999999974 2999999999999999653
No 132
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.83 E-value=5.3e-09 Score=115.48 Aligned_cols=157 Identities=19% Similarity=0.303 Sum_probs=92.8
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchh--------cCCCCeEEEEcCCCCCCCcc---cccCccChHHHHHHhhhhhhcC
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCRE--------KNVDLSVCVVEKGAEVGAHI---ISGNVFEPRALNELLPQWKQEE 174 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~--------~~~G~~V~viEk~~~~g~~~---~~g~~i~~~~l~~l~~~~~~~~ 174 (644)
..|||||||+||+||++|+.|.+...+ ...+..++.+||.+.++.|. ..|..++...+..| -...
T Consensus 38 ~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~Wh~g~~~p~~~~q~~fl~Dl----vtl~ 113 (501)
T 4b63_A 38 ELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFAWHSGMLVPGSKMQISFIKDL----ATLR 113 (501)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCCSSGGGCCTTCBCSSCGGGSS----STTT
T ss_pred CcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCCcCCCCCCCCccccccchhhh----cccc
Confidence 358999999999999999999876211 11245778888888776542 11211111111000 0000
Q ss_pred CCeeeeccCCcE-EEecc-CCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCC------cE
Q 006466 175 APIRVPVSSDKF-WFLTK-DRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADN------KV 246 (644)
Q Consensus 175 ~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g------~v 246 (644)
.| .....+ .++.. ++-.++ .+...+...|.++.++|...|++.+..|+++++|+++..++++ ..
T Consensus 114 ~P----~s~~sf~~yl~~~~rl~~f----~~~~~~~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~ 185 (501)
T 4b63_A 114 DP----RSSFTFLNYLHQKGRLIHF----TNLSTFLPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDF 185 (501)
T ss_dssp CT----TCTTSHHHHHHHHTCHHHH----HTTCCSCCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCE
T ss_pred CC----CCccchHHHHHHhCCccCC----ccccCCCCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccce
Confidence 00 000000 00100 000111 1223455789999999999999988889999999999876532 24
Q ss_pred EEEEeCcCccccCCCcccccccceEEEcCEEEEecCCC
Q 006466 247 IGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCR 284 (644)
Q Consensus 247 ~gV~~~d~g~~~~G~~~~~~~~g~~i~a~~vV~A~G~~ 284 (644)
+.|++.+. .+|+ ..++.|+.||+|+|..
T Consensus 186 ~~V~~~~~---~~g~-------~~~~~ar~vVlatG~~ 213 (501)
T 4b63_A 186 FTVRSRNV---ETGE-------ISARRTRKVVIAIGGT 213 (501)
T ss_dssp EEEEEEET---TTCC-------EEEEEEEEEEECCCCE
T ss_pred EEEEEecC---CCce-------EEEEEeCEEEECcCCC
Confidence 66777651 2232 3678999999999953
No 133
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.82 E-value=5.6e-09 Score=113.88 Aligned_cols=50 Identities=42% Similarity=0.695 Sum_probs=44.7
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHH
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRAL 163 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l 163 (644)
|||+||||||||+++|+.|++. |++|+|||+.+.+|+.+.+.++++.+.+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~------g~~V~lie~~~~~GG~~~~~g~~p~k~l 51 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQL------GMKVGVVEKEKALGGTCLRVGCIPSKAL 51 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT------TCCEEEEESSSSSSHHHHHHSHHHHHHH
T ss_pred CCEEEECCChhHHHHHHHHHHC------CCeEEEEeCCCCCCCccceecchhHHHH
Confidence 7999999999999999999999 9999999999889988777777766554
No 134
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.82 E-value=9e-09 Score=113.66 Aligned_cols=146 Identities=19% Similarity=0.254 Sum_probs=84.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCC-CCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCc
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNV-DLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDK 185 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~-G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~ 185 (644)
.+||||||||+||+++|+.|++. .+ |++|+|||+.+ +|+.+...++++.+.+......+..... .....
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~----~~~G~~V~liE~~~-~GG~~~~~g~~psk~l~~~a~~~~~~~~-----~~~~g 71 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATS----HPETTQVTVIDCDG-IGGAAVLDDCVPSKTFIASTGLRTELRR-----APHLG 71 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH----CTTTEEEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHTT-----TTTTT
T ss_pred CCCEEEECCCHHHHHHHHHHHhC----CCCcCEEEEEeCCC-cCCcccCcCccchHHHHHHHHHHHHHHH-----HHhCC
Confidence 58999999999999999999997 33 89999999988 8887776677666555332211111000 00000
Q ss_pred EEEeccCCccccCCCCCCCCcEEEc-----HHHHHHHHHHHHHhcCCEEecCceEEEEEEcC--CCcEEEEEeCcCcccc
Q 006466 186 FWFLTKDRAFSLPSPFSNRGNYVIS-----LSQLVRWLGGKAEELGVEIYPGFAASEILYDA--DNKVIGIGTNDMGIAK 258 (644)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~v~-----r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~--~g~v~gV~~~d~g~~~ 258 (644)
+.+......+++. . ... ...+...+.+.+++.|++++.++ ++.+..++ ++..+.|.+.+
T Consensus 72 ~~~~~~~~~~~~~-------~-~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~-~~~i~~~~~~~~~~~~V~~~~----- 137 (499)
T 1xdi_A 72 FHIDFDDAKISLP-------Q-IHARVKTLAAAQSADITAQLLSMGVQVIAGR-GELIDSTPGLARHRIKATAAD----- 137 (499)
T ss_dssp BC------CBCHH-------H-HHHHHHHHHHHHHHHHHHHHHHTTCEEEESE-EEECCSSSCCSSEEEEEECTT-----
T ss_pred CccccCCCccCHH-------H-HHHHHHHHHHHHHHHHHHHHHhCCCEEEEeE-EEEecCcccCCCCEEEEEeCC-----
Confidence 0000000000000 0 000 01244456677778899999986 54443210 01233455443
Q ss_pred CCCcccccccce--EEEcCEEEEecCCCCc
Q 006466 259 DGSKKENFQRGV--ELRGRITLLAEGCRGS 286 (644)
Q Consensus 259 ~G~~~~~~~~g~--~i~a~~vV~A~G~~s~ 286 (644)
|. ++.+|.+|+|+|.++.
T Consensus 138 ----------g~~~~~~~d~lviATGs~p~ 157 (499)
T 1xdi_A 138 ----------GSTSEHEADVVLVATGASPR 157 (499)
T ss_dssp ----------SCEEEEEESEEEECCCEEEC
T ss_pred ----------CcEEEEEeCEEEEcCCCCCC
Confidence 33 7999999999997653
No 135
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.80 E-value=2.3e-09 Score=117.76 Aligned_cols=52 Identities=25% Similarity=0.483 Sum_probs=44.9
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHH
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALN 164 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~ 164 (644)
..+||+||||||+|+++|+.|++. |++|+||||. .+|+.+...++++.+.+.
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~------G~~V~liE~~-~~GG~~~~~gc~p~k~l~ 70 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAEL------GARAAVVESH-KLGGTCVNVGCVPKKVMW 70 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHT------TCCEEEEESS-CTTHHHHHHSHHHHHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC------CCeEEEEecC-CCCCcccccCccchHHHH
Confidence 469999999999999999999999 9999999976 678877777777766553
No 136
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.80 E-value=1e-08 Score=112.78 Aligned_cols=138 Identities=17% Similarity=0.232 Sum_probs=82.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHh---hhhhhcCCCeeeeccC
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELL---PQWKQEEAPIRVPVSS 183 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~---~~~~~~~~~~~~~~~~ 183 (644)
+|||+|||||++|+++|+.|++. |++|+|||| ..+|+.+...++++.+.+.... ..+.... .......
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~~------G~~V~liEk-~~~GG~~~~~gcip~k~l~~~a~~~~~~~~~~-~~g~~~~- 96 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGAL------GKRVAIAEE-YRIGGTCVIRGCVPKKLYFYASQYAQEFSKSI-GFGWKYA- 96 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHT------TCCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHG-GGTBCCC-
T ss_pred CCCEEEECcCHHHHHHHHHHHhC------cCEEEEEeC-CCCCCceeccCccccHHHHHHHHHHHHHHHHH-hCCcccC-
Confidence 59999999999999999999999 999999999 6788877776777665542211 1111000 0000000
Q ss_pred CcEEEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeC-cCccccCCCc
Q 006466 184 DKFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTN-DMGIAKDGSK 262 (644)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~-d~g~~~~G~~ 262 (644)
...++++..... ..-....+..++.+.+++.|++++.+. +..+ +. . .|.+. +
T Consensus 97 --------~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~v~~~~g~-~~~i--~~-~---~v~v~~~--------- 149 (484)
T 3o0h_A 97 --------DPIFNWEKLVAA---KNKEISRLEGLYREGLQNSNVHIYESR-AVFV--DE-H---TLELSVT--------- 149 (484)
T ss_dssp --------CCEECHHHHHHH---HHHHHHHHHHHHHHHHHHTTCEEEESC-EEEE--ET-T---EEEETTT---------
T ss_pred --------CCccCHHHHHHH---HHHHHHHHHHHHHHHHHhCCCEEEEeE-EEEe--eC-C---EEEEecC---------
Confidence 000000000000 000113445566667778899999884 4333 22 2 24443 2
Q ss_pred ccccccceEEEcCEEEEecCCCCc
Q 006466 263 KENFQRGVELRGRITLLAEGCRGS 286 (644)
Q Consensus 263 ~~~~~~g~~i~a~~vV~A~G~~s~ 286 (644)
+.++.+|.+|+|+|.++.
T Consensus 150 ------~~~~~~d~lviAtG~~p~ 167 (484)
T 3o0h_A 150 ------GERISAEKILIATGAKIV 167 (484)
T ss_dssp ------CCEEEEEEEEECCCEEEC
T ss_pred ------CeEEEeCEEEEccCCCcc
Confidence 467999999999997654
No 137
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.79 E-value=1.2e-09 Score=119.62 Aligned_cols=138 Identities=14% Similarity=0.200 Sum_probs=82.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhh---hhhhcCCCeeeeccC
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLP---QWKQEEAPIRVPVSS 183 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~---~~~~~~~~~~~~~~~ 183 (644)
+|||+||||||+|+++|+.|++. |++|+|||| ..+|+.+...++++.+.+..... .+.... ..
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~~------G~~V~liEk-~~~GG~~~~~gcip~k~l~~~~~~~~~~~~~~-~~------ 70 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAAL------GKKVAIAEE-FRYGGTCVIRGCVPKKLYVYASQFAEHFEDAA-GF------ 70 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTT------TCCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHGG-GG------
T ss_pred CCcEEEECcCHHHHHHHHHHHhC------CCEEEEEeC-CCCCCcccccCchhhHHHHHHHHHHHHHHHHH-hc------
Confidence 58999999999999999999999 999999999 67888777777776655422211 111100 00
Q ss_pred CcEEEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEe-CcCccccCCCc
Q 006466 184 DKFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGT-NDMGIAKDGSK 262 (644)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~-~d~g~~~~G~~ 262 (644)
.+.. ....++++..... ..-....+..++.+.+++.|++++.+. +..+ +.. .|.+ .+
T Consensus 71 -g~~~--~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~gv~~~~g~-~~~i---~~~---~v~~~~~--------- 128 (463)
T 4dna_A 71 -GWTV--GESRFDWAKLVAA---KEQEIARLEGLYRKGLANAGAEILDTR-AELA---GPN---TVKLLAS--------- 128 (463)
T ss_dssp -TEEE--CCCEECHHHHHHH---HHHHHHHHHHHHHHHHHHHTCEEEESC-EEES---SSS---EEEETTT---------
T ss_pred -Cccc--CCCCcCHHHHHHH---HHHHHHHHHHHHHHHHHhCCCEEEEEE-EEEe---eCC---EEEEecC---------
Confidence 0000 0000000000000 000012445556666777899999884 3322 222 2444 22
Q ss_pred ccccccceEEEcCEEEEecCCCCc
Q 006466 263 KENFQRGVELRGRITLLAEGCRGS 286 (644)
Q Consensus 263 ~~~~~~g~~i~a~~vV~A~G~~s~ 286 (644)
+.++.+|.+|+|+|.++.
T Consensus 129 ------~~~~~~d~lviAtG~~p~ 146 (463)
T 4dna_A 129 ------GKTVTAERIVIAVGGHPS 146 (463)
T ss_dssp ------TEEEEEEEEEECCCEEEC
T ss_pred ------CeEEEeCEEEEecCCCcc
Confidence 578999999999997654
No 138
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.78 E-value=1.7e-08 Score=110.51 Aligned_cols=51 Identities=20% Similarity=0.450 Sum_probs=44.9
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHH
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRAL 163 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l 163 (644)
..+||||||||++|+++|+.|++. |++|+|||+. .+|+.+...++++.+.+
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~------g~~V~lie~~-~~GG~~~~~g~ip~k~l 53 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQ------GAQVTLIERG-TIGGTCVNVGCVPSKIM 53 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESS-STTHHHHHHSHHHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC------CCEEEEEeCC-CCCccccCCCccchHHH
Confidence 358999999999999999999999 9999999998 68888777777776655
No 139
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.75 E-value=3.6e-08 Score=107.56 Aligned_cols=51 Identities=31% Similarity=0.552 Sum_probs=43.8
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHH
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRAL 163 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l 163 (644)
..+||||||||+||+++|+.|++. |.+|+|||+ +.+|+.+..-++++.+.+
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~------g~~V~lie~-~~~GG~~~~~g~~Psk~l 54 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQL------GIPTVLVEG-QALGGTCLNIGCIPSKAL 54 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHH------TCCEEEECS-SCTTHHHHHHSHHHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC------CCEEEEEcc-CCCCCcCCCcCcHhHHHH
Confidence 358999999999999999999999 999999999 678887776666666544
No 140
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.75 E-value=7.8e-09 Score=111.95 Aligned_cols=111 Identities=22% Similarity=0.263 Sum_probs=72.4
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCC--eEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccC
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDL--SVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSS 183 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~--~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~ 183 (644)
+.+||||||||+||+++|..|++. |. +|+|||+.+.+..... . +...+... ...
T Consensus 3 ~~~~vvIIGgG~aGl~aA~~l~~~------g~~~~V~lie~~~~~~~~~~-------~----l~~~~~~~------~~~- 58 (431)
T 1q1r_A 3 ANDNVVIVGTGLAGVEVAFGLRAS------GWEGNIRLVGDATVIPHHLP-------P----LSKAYLAG------KAT- 58 (431)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHT------TCCSEEEEECSCCSCCBCSG-------G----GGTTTTTT------CSC-
T ss_pred CCCcEEEEcCHHHHHHHHHHHHcc------CcCCCEEEEECCCCCCCcCC-------C----CcHHHhCC------CCC-
Confidence 468999999999999999999998 87 7999999875432100 0 00000000 000
Q ss_pred CcEEEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcc
Q 006466 184 DKFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKK 263 (644)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~ 263 (644)
...+.+ .+.+.+++.|++++.+++|+.+..++ . .|.+.+
T Consensus 59 --------~~~~~~-------------------~~~~~~~~~gv~~~~~~~v~~i~~~~-~---~v~~~~---------- 97 (431)
T 1q1r_A 59 --------AESLYL-------------------RTPDAYAAQNIQLLGGTQVTAINRDR-Q---QVILSD---------- 97 (431)
T ss_dssp --------SGGGBS-------------------SCHHHHHHTTEEEECSCCEEEEETTT-T---EEEETT----------
T ss_pred --------hHHhcc-------------------cCHHHHHhCCCEEEeCCEEEEEECCC-C---EEEECC----------
Confidence 000000 01233456799999999999987544 2 356554
Q ss_pred cccccceEEEcCEEEEecCCCCc
Q 006466 264 ENFQRGVELRGRITLLAEGCRGS 286 (644)
Q Consensus 264 ~~~~~g~~i~a~~vV~A~G~~s~ 286 (644)
|.++.+|.||+|+|.++.
T Consensus 98 -----g~~~~~d~lviAtG~~p~ 115 (431)
T 1q1r_A 98 -----GRALDYDRLVLATGGRPR 115 (431)
T ss_dssp -----SCEEECSEEEECCCEEEC
T ss_pred -----CCEEECCEEEEcCCCCcc
Confidence 568999999999998764
No 141
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.75 E-value=3.1e-08 Score=106.19 Aligned_cols=111 Identities=24% Similarity=0.356 Sum_probs=89.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcE
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (644)
...|+|||+|+.|+.+|..|++. |.+|+++|+.+.+....
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~~------g~~Vtvv~~~~~~~~~~---------------------------------- 181 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARAK------GLEVDVVELAPRVMARV---------------------------------- 181 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSTTTTT----------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhC------CCEEEEEeCCCcchhhc----------------------------------
Confidence 35799999999999999999999 99999999987543210
Q ss_pred EEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCccccc
Q 006466 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (644)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~ 266 (644)
....+.+.|.+.+++.||++++++.|+++..++ +.+.+|.+.+
T Consensus 182 -----------------------~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~~v~~V~~~d------------- 224 (404)
T 3fg2_P 182 -----------------------VTPEISSYFHDRHSGAGIRMHYGVRATEIAAEG-DRVTGVVLSD------------- 224 (404)
T ss_dssp -----------------------SCHHHHHHHHHHHHHTTCEEECSCCEEEEEEET-TEEEEEEETT-------------
T ss_pred -----------------------cCHHHHHHHHHHHHhCCcEEEECCEEEEEEecC-CcEEEEEeCC-------------
Confidence 013446678888889999999999999998765 6677888876
Q ss_pred ccceEEEcCEEEEecCCCCcchHHHHHHcCCC
Q 006466 267 QRGVELRGRITLLAEGCRGSLSEKLIKNFKLR 298 (644)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~l~~~l~~~~~~~ 298 (644)
|.++.+|.||.|+|.++.. .+.+..++.
T Consensus 225 --G~~i~aD~Vv~a~G~~p~~--~l~~~~gl~ 252 (404)
T 3fg2_P 225 --GNTLPCDLVVVGVGVIPNV--EIAAAAGLP 252 (404)
T ss_dssp --SCEEECSEEEECCCEEECC--HHHHHTTCC
T ss_pred --CCEEEcCEEEECcCCccCH--HHHHhCCCC
Confidence 6789999999999988753 455566665
No 142
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.75 E-value=1.8e-08 Score=110.18 Aligned_cols=51 Identities=18% Similarity=0.436 Sum_probs=43.5
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHH
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRAL 163 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l 163 (644)
.++||+|||||++|+++|+.|++. |++|+|||+. .+|+.+...++++.+.+
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~------g~~V~liE~~-~~GG~~~~~gciP~k~l 53 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAF------GKRVALIESK-ALGGTCVNVGCVPKKVM 53 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESS-CTTHHHHHHSHHHHHHH
T ss_pred ccCcEEEECCCHHHHHHHHHHHhC------CCcEEEEcCC-CCCCcCcCcCchhHHHH
Confidence 358999999999999999999998 9999999998 67887766666665544
No 143
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.75 E-value=2e-08 Score=110.58 Aligned_cols=52 Identities=29% Similarity=0.384 Sum_probs=46.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHH
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNE 165 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~ 165 (644)
+|||+||||||||++||+.|++. |++|+||||.+ +|+.+..-++++.+.+..
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~------G~~V~liE~~~-~GGtc~~~gciPsk~l~~ 59 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKH------TDKVVLIEGGA-YGTTCARVGCMPSKLLIA 59 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTT------CSCEEEEESSC-SSCHHHHHSHHHHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhC------CCcEEEEeCCC-CCCcccccChhcCHHHHH
Confidence 59999999999999999999999 99999999975 888888778888776643
No 144
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.75 E-value=2.2e-08 Score=109.52 Aligned_cols=50 Identities=42% Similarity=0.723 Sum_probs=44.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHH
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRAL 163 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l 163 (644)
++||||||||+||+++|..|++. |.+|+|||+.+ +|+.+.+.++++.+.+
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~------g~~V~lie~~~-~GG~~~~~g~iP~k~l 55 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQL------GLKVLAVEAGE-VGGVCLNVGCIPTKAL 55 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESSC-TTHHHHHTSHHHHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHC------CCeEEEEeCCC-CCCCCCCcChHHHHHH
Confidence 58999999999999999999999 99999999987 7887777777766554
No 145
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.74 E-value=1.2e-08 Score=112.16 Aligned_cols=52 Identities=21% Similarity=0.378 Sum_probs=42.9
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCC---------CCCCcccccCccChHHH
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA---------EVGAHIISGNVFEPRAL 163 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~---------~~g~~~~~g~~i~~~~l 163 (644)
.+|||+||||||||+++|+.|++. |++|+||||.. .+|+.+...++++.+.+
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~------G~~V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l 68 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLN------GARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLM 68 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHT------TCCEEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC------CCEEEEEEeccccccccccCCcCCeecccCchhhHHH
Confidence 469999999999999999999999 99999999521 26777776677766554
No 146
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.73 E-value=2.5e-08 Score=108.69 Aligned_cols=114 Identities=18% Similarity=0.216 Sum_probs=72.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcEE
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKFW 187 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 187 (644)
+||||||||+||+++|..|++. ++|.+|+|||+.+.++... ++ +...+..
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~----~~g~~V~vie~~~~~g~~~-~~-------~~~~~~~------------------ 52 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKK----YPQAEISLIDKQATVGYLS-GG-------LSAYFNH------------------ 52 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH----CSSSEEEEECSSSCCSSCC-C---------------------------------
T ss_pred CCEEEECCCHHHHHHHHHHHhh----CcCCcEEEEECCCCCcccC-cc-------chhhhcC------------------
Confidence 6999999999999999999997 4589999999998766311 00 0000000
Q ss_pred EeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccccc
Q 006466 188 FLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQ 267 (644)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~~ 267 (644)
. . + ....+...+.+.+++.|++++.+++|+++..++ + .+.+....
T Consensus 53 ----~--~--~-----------~~~~~~~~~~~~~~~~gi~~~~~~~V~~id~~~-~-~v~v~~~~-------------- 97 (452)
T 3oc4_A 53 ----T--I--N-----------ELHEARYITEEELRRQKIQLLLNREVVAMDVEN-Q-LIAWTRKE-------------- 97 (452)
T ss_dssp ---------------------------CCCCHHHHHHTTEEEECSCEEEEEETTT-T-EEEEEETT--------------
T ss_pred ----C--C--C-----------CHHHhhcCCHHHHHHCCCEEEECCEEEEEECCC-C-EEEEEecC--------------
Confidence 0 0 0 000000112334456899999999999987655 3 32343111
Q ss_pred cceEEEcCEEEEecCCCCc
Q 006466 268 RGVELRGRITLLAEGCRGS 286 (644)
Q Consensus 268 ~g~~i~a~~vV~A~G~~s~ 286 (644)
++.++.+|.+|+|+|.++.
T Consensus 98 ~~~~~~~d~lviAtG~~p~ 116 (452)
T 3oc4_A 98 EQQWYSYDKLILATGASQF 116 (452)
T ss_dssp EEEEEECSEEEECCCCCBC
T ss_pred ceEEEEcCEEEECCCcccC
Confidence 1578999999999998764
No 147
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.72 E-value=4.6e-08 Score=105.27 Aligned_cols=111 Identities=24% Similarity=0.328 Sum_probs=88.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcE
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (644)
...|+|||+|..|+.+|..|++. |.+|+++|+.+.+....
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~------g~~Vtvv~~~~~~l~~~---------------------------------- 191 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKF------GVNVTLLEALPRVLARV---------------------------------- 191 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSSSTTTTT----------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhc------CCeEEEEecCCchhhhh----------------------------------
Confidence 35799999999999999999999 99999999987643210
Q ss_pred EEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCccccc
Q 006466 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (644)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~ 266 (644)
....+.+.+.+.+++.||+|++++.|+++..++ +.+.+|.+.+
T Consensus 192 -----------------------~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~~v~~v~l~d------------- 234 (415)
T 3lxd_A 192 -----------------------AGEALSEFYQAEHRAHGVDLRTGAAMDCIEGDG-TKVTGVRMQD------------- 234 (415)
T ss_dssp -----------------------SCHHHHHHHHHHHHHTTCEEEETCCEEEEEESS-SBEEEEEESS-------------
T ss_pred -----------------------cCHHHHHHHHHHHHhCCCEEEECCEEEEEEecC-CcEEEEEeCC-------------
Confidence 013446677888889999999999999998765 6777898876
Q ss_pred ccceEEEcCEEEEecCCCCcchHHHHHHcCCC
Q 006466 267 QRGVELRGRITLLAEGCRGSLSEKLIKNFKLR 298 (644)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~l~~~l~~~~~~~ 298 (644)
|.++.+|.||.|+|.++.. .+.+..++.
T Consensus 235 --G~~i~aD~Vv~a~G~~p~~--~l~~~~gl~ 262 (415)
T 3lxd_A 235 --GSVIPADIVIVGIGIVPCV--GALISAGAS 262 (415)
T ss_dssp --SCEEECSEEEECSCCEESC--HHHHHTTCC
T ss_pred --CCEEEcCEEEECCCCccCh--HHHHhCCCC
Confidence 6789999999999998753 355556665
No 148
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.72 E-value=1.7e-08 Score=109.93 Aligned_cols=51 Identities=18% Similarity=0.408 Sum_probs=44.5
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHH
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRAL 163 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l 163 (644)
..+||+|||||++|+++|+.|++. |++|+|||+. .+|+.+...++++.+.+
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~------g~~V~liE~~-~~GG~~~~~gciP~k~l 53 (450)
T 1ges_A 3 KHYDYIAIGGGSGGIASINRAAMY------GQKCALIEAK-ELGGTCVNVGCVPKKVM 53 (450)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTT------TCCEEEEESS-CTTHHHHHHSHHHHHHH
T ss_pred ccCCEEEECCCHHHHHHHHHHHhC------CCeEEEEcCC-CCCCcccccCccChHHH
Confidence 368999999999999999999998 9999999998 67887777777766654
No 149
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.71 E-value=1.7e-08 Score=111.05 Aligned_cols=51 Identities=27% Similarity=0.484 Sum_probs=44.1
Q ss_pred cccEEEECCCHHHHHHHHHHHh-hchhcCCCCeEEEEc--------CCCCCCCcccccCccChHHH
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQ-LCREKNVDLSVCVVE--------KGAEVGAHIISGNVFEPRAL 163 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~-~~~~~~~G~~V~viE--------k~~~~g~~~~~g~~i~~~~l 163 (644)
+|||+||||||+|+++|+.|++ . |++|+||| +...+|+.+...++++.+.+
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~------G~~V~liE~~~~~~~~~~~~~GG~c~~~gciPsk~l 62 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLH------KKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLM 62 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHH------CCCEEEEESCSSSBTTTBSCTTCHHHHHSHHHHHHH
T ss_pred cccEEEECCCHHHHHHHHHHHHHc------CCEEEEEecccccccccCCCcCccccCCCcchhhHH
Confidence 5899999999999999999999 8 99999999 35678888777777776654
No 150
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.70 E-value=1.9e-08 Score=111.11 Aligned_cols=51 Identities=27% Similarity=0.578 Sum_probs=43.3
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHH
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRAL 163 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l 163 (644)
|++||||||||+||+++|+.|++. |++|+|||+. .+|+.+...++++.+.+
T Consensus 1 m~~dVvIIGgG~aGl~aA~~l~~~------g~~V~liE~~-~~GG~c~~~gc~P~k~l 51 (500)
T 1onf_A 1 MVYDLIVIGGGSGGMAAARRAARH------NAKVALVEKS-RLGGTCVNVGCVPKKIM 51 (500)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHHT------TCCEEEEESS-STTHHHHHTSHHHHHHH
T ss_pred CccCEEEECCCHHHHHHHHHHHHC------CCcEEEEeCC-CcCccccccCCcchHHH
Confidence 358999999999999999999999 9999999998 47887776677765543
No 151
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.70 E-value=2.2e-08 Score=110.44 Aligned_cols=53 Identities=28% Similarity=0.439 Sum_probs=44.5
Q ss_pred cccccEEEECCCHHHHHHHHHHHh-hchhcCCCCeEEEEc--------CCCCCCCcccccCccChHHH
Q 006466 105 SMAYDVVIVGAGPAGLSAAIRLKQ-LCREKNVDLSVCVVE--------KGAEVGAHIISGNVFEPRAL 163 (644)
Q Consensus 105 ~~~~DVvIVGgG~aGl~aA~~La~-~~~~~~~G~~V~viE--------k~~~~g~~~~~g~~i~~~~l 163 (644)
.+.+||+||||||||+++|+.|++ . |++|+||| +...+|+.+...++++.+.+
T Consensus 5 ~~~~dvvVIGgG~aGl~aA~~la~~~------G~~V~liE~~~~~~~~~~~~~GG~~~~~gciP~k~l 66 (495)
T 2wpf_A 5 SKAFDLVVIGAGSGGLEAGWNAATLY------GKRVAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLM 66 (495)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHHH------CCCEEEEESCSSSBTTTBCBTTHHHHHHSHHHHHHH
T ss_pred ccccCEEEECCChhHHHHHHHHHHhc------CCeEEEEecccccccccCCCCCCeeecCCcchHHHH
Confidence 346999999999999999999999 9 99999999 35567887777677766554
No 152
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.66 E-value=3e-08 Score=109.16 Aligned_cols=114 Identities=20% Similarity=0.253 Sum_probs=72.0
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCC---CeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeecc
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVD---LSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVS 182 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G---~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~ 182 (644)
|.+||||||||+||+++|..|++. | .+|+|||+.+.++... + .+ +.+.... . ..
T Consensus 34 m~~dvvIIGaG~aGl~aA~~l~~~------g~~~~~V~lie~~~~~~~~~-~-------~~----~~~~~~~--~---~~ 90 (490)
T 2bc0_A 34 WGSKIVVVGANHAGTACIKTMLTN------YGDANEIVVFDQNSNISFLG-A-------GM----ALWIGEQ--I---AG 90 (490)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH------HGGGSEEEEECSSSCCSBCG-G-------GH----HHHHTTS--S---SC
T ss_pred cCCcEEEECCCHHHHHHHHHHHhc------CCCCCeEEEEECCCCCCccc-c-------cc----chhhcCc--c---CC
Confidence 468999999999999999999998 6 9999999987654311 1 11 1110000 0 00
Q ss_pred CCcEEEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCc
Q 006466 183 SDKFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSK 262 (644)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~ 262 (644)
...+.. .+.+.+++.|++++.+++|+.+..++ +.+ .|.. + |
T Consensus 91 ---------~~~~~~-------------------~~~~~~~~~gv~v~~~~~v~~i~~~~-~~v-~v~~-~------g-- 131 (490)
T 2bc0_A 91 ---------PEGLFY-------------------SDKEELESLGAKVYMESPVQSIDYDA-KTV-TALV-D------G-- 131 (490)
T ss_dssp ---------SGGGBS-------------------CCHHHHHHTTCEEETTCCEEEEETTT-TEE-EEEE-T------T--
T ss_pred ---------HHHhhh-------------------cCHHHHHhCCCEEEeCCEEEEEECCC-CEE-EEEe-C------C--
Confidence 000000 01233456799999999999886554 322 3331 2 1
Q ss_pred ccccccceEEEcCEEEEecCCCCc
Q 006466 263 KENFQRGVELRGRITLLAEGCRGS 286 (644)
Q Consensus 263 ~~~~~~g~~i~a~~vV~A~G~~s~ 286 (644)
.+.++.+|.+|+|+|.++.
T Consensus 132 -----~~~~~~~d~lviAtG~~p~ 150 (490)
T 2bc0_A 132 -----KNHVETYDKLIFATGSQPI 150 (490)
T ss_dssp -----EEEEEECSEEEECCCEEEC
T ss_pred -----cEEEEECCEEEECCCCCcC
Confidence 1357999999999997653
No 153
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.65 E-value=4.7e-08 Score=106.34 Aligned_cols=39 Identities=44% Similarity=0.552 Sum_probs=34.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCC
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVG 149 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g 149 (644)
.+||||||||+||+++|..|++. ++|.+|+|||+.+.++
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~----~~~~~V~vie~~~~~~ 41 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRL----KPEWDVKVFEATEWVS 41 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH----CTTSEEEEECSSSCCC
T ss_pred cCcEEEECCcHHHHHHHHHHHHh----CcCCCEEEEECCCccc
Confidence 37999999999999999999997 3478999999998664
No 154
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.65 E-value=3.5e-08 Score=105.11 Aligned_cols=108 Identities=20% Similarity=0.217 Sum_probs=73.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcE
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (644)
...|||||||+||++||..|++. +.+|+|||+.+.++... ..+...+.... ..+
T Consensus 9 ~~~~vIvGgG~AGl~aA~~L~~~------~~~itlie~~~~~~y~~--------~~l~~~l~g~~----------~~~-- 62 (385)
T 3klj_A 9 STKILILGAGPAGFSAAKAALGK------CDDITMINSEKYLPYYR--------PRLNEIIAKNK----------SID-- 62 (385)
T ss_dssp BCSEEEECCSHHHHHHHHHHTTT------CSCEEEECSSSSCCBCG--------GGHHHHHHSCC----------CGG--
T ss_pred CCCEEEEcCcHHHHHHHHHHhCC------CCEEEEEECCCCCCccc--------ChhhHHHcCCC----------CHH--
Confidence 57899999999999999999665 99999999998765311 11111111100 000
Q ss_pred EEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCccccc
Q 006466 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (644)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~ 266 (644)
++...+.+.+++.|++++++++|+++..++ . .|++.+
T Consensus 63 --------------------------~l~~~~~~~~~~~~i~~~~~~~V~~id~~~-~---~v~~~~------------- 99 (385)
T 3klj_A 63 --------------------------DILIKKNDWYEKNNIKVITSEFATSIDPNN-K---LVTLKS------------- 99 (385)
T ss_dssp --------------------------GTBSSCHHHHHHTTCEEECSCCEEEEETTT-T---EEEETT-------------
T ss_pred --------------------------HccCCCHHHHHHCCCEEEeCCEEEEEECCC-C---EEEECC-------------
Confidence 000012233456799999999999997654 2 366665
Q ss_pred ccceEEEcCEEEEecCCCC
Q 006466 267 QRGVELRGRITLLAEGCRG 285 (644)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s 285 (644)
|.++.+|.+|+|+|.++
T Consensus 100 --g~~~~yd~lvlAtG~~p 116 (385)
T 3klj_A 100 --GEKIKYEKLIIASGSIA 116 (385)
T ss_dssp --SCEEECSEEEECCCEEE
T ss_pred --CCEEECCEEEEecCCCc
Confidence 67899999999999754
No 155
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.62 E-value=2.8e-08 Score=107.01 Aligned_cols=110 Identities=25% Similarity=0.278 Sum_probs=72.1
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCCe--EEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccC
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLS--VCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSS 183 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~--V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~ 183 (644)
+.+||||||||+||+++|..|++. |.+ |+|||+.+..+.... . +...+..
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~------g~~~~V~lie~~~~~~y~~~--------~---l~~~~~~----------- 59 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQN------GFEGRVLVIGREPEIPYERP--------P---LSKEYLA----------- 59 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT------TCCSCEEEEESSSSCCBCSG--------G---GGTTTTT-----------
T ss_pred CCCcEEEECChHHHHHHHHHHHcc------CcCCCEEEEecCCCCCcCcc--------c---CCHHHHc-----------
Confidence 468999999999999999999998 777 999999886543210 0 0000000
Q ss_pred CcEEEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcc
Q 006466 184 DKFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKK 263 (644)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~ 263 (644)
... .. ..+.....+..++.|++++.+++|+.+..+. . .|.+.+
T Consensus 60 -------~~~--~~--------------~~~~~~~~~~~~~~~i~~~~~~~v~~id~~~--~--~v~~~~---------- 102 (415)
T 3lxd_A 60 -------REK--TF--------------ERICIRPAQFWEDKAVEMKLGAEVVSLDPAA--H--TVKLGD---------- 102 (415)
T ss_dssp -------TSS--CS--------------GGGBSSCHHHHHHTTEEEEETCCEEEEETTT--T--EEEETT----------
T ss_pred -------CCC--CH--------------HHhccCCHHHHHHCCcEEEeCCEEEEEECCC--C--EEEECC----------
Confidence 000 00 0000011233456799999999999986543 2 356655
Q ss_pred cccccceEEEcCEEEEecCCCC
Q 006466 264 ENFQRGVELRGRITLLAEGCRG 285 (644)
Q Consensus 264 ~~~~~g~~i~a~~vV~A~G~~s 285 (644)
|.++.+|.+|+|+|.++
T Consensus 103 -----g~~~~~d~lvlAtG~~~ 119 (415)
T 3lxd_A 103 -----GSAIEYGKLIWATGGDP 119 (415)
T ss_dssp -----SCEEEEEEEEECCCEEC
T ss_pred -----CCEEEeeEEEEccCCcc
Confidence 67899999999999764
No 156
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=98.61 E-value=4e-07 Score=98.52 Aligned_cols=58 Identities=14% Similarity=0.183 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccccccceEEEcCEEEEecCCCCc
Q 006466 212 SQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 286 (644)
Q Consensus 212 ~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~~~g~~i~a~~vV~A~G~~s~ 286 (644)
..+.+.|.+.+++.|++|+++++|++|..++ +.+++|.++ |.+++||.||.|.|.++.
T Consensus 234 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~-~~v~~v~~~----------------g~~~~ad~VV~a~~~~~~ 291 (433)
T 1d5t_A 234 GELPQGFARLSAIYGGTYMLNKPVDDIIMEN-GKVVGVKSE----------------GEVARCKQLICDPSYVPD 291 (433)
T ss_dssp THHHHHHHHHHHHHTCCCBCSCCCCEEEEET-TEEEEEEET----------------TEEEECSEEEECGGGCGG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEeC-CEEEEEEEC----------------CeEEECCEEEECCCCCcc
Confidence 5788889999999999999999999998776 667677653 578999999999998863
No 157
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.61 E-value=6.6e-08 Score=103.88 Aligned_cols=110 Identities=26% Similarity=0.382 Sum_probs=86.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcE
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (644)
..+|+|||+|+.|+.+|..|++. |.+|+++|+.+.+... .+
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~------g~~Vtvv~~~~~~l~~----------~~----------------------- 183 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARKL------GLSVTILEAGDELLVR----------VL----------------------- 183 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSSHH----------HH-----------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhC------CCeEEEEecCCccchh----------hc-----------------------
Confidence 45799999999999999999999 9999999998764310 00
Q ss_pred EEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCccccc
Q 006466 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (644)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~ 266 (644)
...+.+.+.+.+++.||++++++.|+++..++ .+.+|++.|
T Consensus 184 ------------------------~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~--~~~~v~~~d------------- 224 (410)
T 3ef6_A 184 ------------------------GRRIGAWLRGLLTELGVQVELGTGVVGFSGEG--QLEQVMASD------------- 224 (410)
T ss_dssp ------------------------CHHHHHHHHHHHHHHTCEEECSCCEEEEECSS--SCCEEEETT-------------
T ss_pred ------------------------CHHHHHHHHHHHHHCCCEEEeCCEEEEEeccC--cEEEEEECC-------------
Confidence 02346667888888999999999999987643 455788776
Q ss_pred ccceEEEcCEEEEecCCCCcchHHHHHHcCCC
Q 006466 267 QRGVELRGRITLLAEGCRGSLSEKLIKNFKLR 298 (644)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~l~~~l~~~~~~~ 298 (644)
|.++.+|.||.|+|.++.. .+.+..++.
T Consensus 225 --g~~i~aD~Vv~a~G~~p~~--~l~~~~gl~ 252 (410)
T 3ef6_A 225 --GRSFVADSALICVGAEPAD--QLARQAGLA 252 (410)
T ss_dssp --SCEEECSEEEECSCEEECC--HHHHHTTCC
T ss_pred --CCEEEcCEEEEeeCCeecH--HHHHhCCCc
Confidence 6789999999999988753 355666766
No 158
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.61 E-value=7.4e-08 Score=108.51 Aligned_cols=118 Identities=17% Similarity=0.186 Sum_probs=75.0
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCc
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDK 185 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~ 185 (644)
+..||||||||+||+++|..|++. ++|.+|+|||+.+.++... ..+...+.....
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~----~~g~~V~vie~~~~~~~~~--------~~lp~~~~g~~~------------- 89 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRL----SEEDEIIMVERGEYISFAN--------CGLPYYIGGVIT------------- 89 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH----CSSSEEEEECSSSCSSBCG--------GGHHHHHTTSSC-------------
T ss_pred cCCCEEEECCcHHHHHHHHHHHhh----CcCCCEEEEECCCCccccC--------CCCchhhcCcCC-------------
Confidence 357999999999999999999997 4589999999998765311 111111100000
Q ss_pred EEEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccc
Q 006466 186 FWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKEN 265 (644)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~ 265 (644)
+ ....+...+...+++.|++++++++|+++..++ +.+ .+...+ +|+
T Consensus 90 ------------~-----------~~~~~~~~~~~~~~~~gi~v~~~~~V~~id~~~-~~v-~v~~~~-----~g~---- 135 (588)
T 3ics_A 90 ------------E-----------RQKLLVQTVERMSKRFNLDIRVLSEVVKINKEE-KTI-TIKNVT-----TNE---- 135 (588)
T ss_dssp ------------C-----------GGGGBSSCHHHHHHHTTCEEECSEEEEEEETTT-TEE-EEEETT-----TCC----
T ss_pred ------------C-----------hHHhhccCHHHHHHhcCcEEEECCEEEEEECCC-CEE-EEeecC-----CCC----
Confidence 0 000011224445567899999999999997655 333 333211 111
Q ss_pred cccceEEEcCEEEEecCCCC
Q 006466 266 FQRGVELRGRITLLAEGCRG 285 (644)
Q Consensus 266 ~~~g~~i~a~~vV~A~G~~s 285 (644)
..++.+|.+|+|+|.++
T Consensus 136 ---~~~~~~d~lviAtG~~p 152 (588)
T 3ics_A 136 ---TYNEAYDVLILSPGAKP 152 (588)
T ss_dssp ---EEEEECSEEEECCCEEE
T ss_pred ---EEEEeCCEEEECCCCCC
Confidence 13789999999999754
No 159
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=98.60 E-value=2.9e-07 Score=101.90 Aligned_cols=41 Identities=39% Similarity=0.513 Sum_probs=38.3
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCC-CeEEEEcCCCCCCCcc
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVD-LSVCVVEKGAEVGAHI 152 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G-~~V~viEk~~~~g~~~ 152 (644)
+.+||+|||||++||+||+.|++. | .+|+|+|+++.+||.+
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~------G~~~V~VlEa~~riGGr~ 48 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQN------GIQDCLVLEARDRVGGRL 48 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHT------TCCSEEEECSSSSSBTTC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhc------CCCCEEEEeCCCCCCCce
Confidence 458999999999999999999999 9 9999999999999875
No 160
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.59 E-value=5.9e-08 Score=104.24 Aligned_cols=107 Identities=23% Similarity=0.261 Sum_probs=70.7
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCC--eEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccC
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDL--SVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSS 183 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~--~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~ 183 (644)
+.+||||||||+||+++|..|++. |. +|+|||+.+.++.... .+ ++. ++.. .. .
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~------g~~~~V~lie~~~~~~~~~~---~~-~~~---~~~~----~~-------~ 61 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQA------GYQGLITVVGDEAERPYDRP---PL-SKD---FMAH----GD-------A 61 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHH------TCCSCEEEEESSCSCCBCSG---GG-GTH---HHHH----CC-------G
T ss_pred CCCcEEEECChHHHHHHHHHHHcc------CCCCeEEEEECCCCCcccCC---CC-CHH---HhCC----Cc-------h
Confidence 468999999999999999999999 77 5999999876542100 00 000 0000 00 0
Q ss_pred CcEEEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcc
Q 006466 184 DKFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKK 263 (644)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~ 263 (644)
+. + .+. .+++.|++++.+++|+.+..+. . .|.+.+
T Consensus 62 ~~-----------~----------~~~----------~~~~~~v~~~~~~~v~~i~~~~--~--~v~~~~---------- 96 (408)
T 2gqw_A 62 EK-----------I----------RLD----------CKRAPEVEWLLGVTAQSFDPQA--H--TVALSD---------- 96 (408)
T ss_dssp GG-----------S----------BCC----------CTTSCSCEEEETCCEEEEETTT--T--EEEETT----------
T ss_pred hh-----------h----------hHH----------HHHHCCCEEEcCCEEEEEECCC--C--EEEECC----------
Confidence 00 0 000 2245789999999999886543 2 355554
Q ss_pred cccccceEEEcCEEEEecCCCCc
Q 006466 264 ENFQRGVELRGRITLLAEGCRGS 286 (644)
Q Consensus 264 ~~~~~g~~i~a~~vV~A~G~~s~ 286 (644)
|.++.+|.+|+|+|.++.
T Consensus 97 -----g~~~~~d~lviAtG~~~~ 114 (408)
T 2gqw_A 97 -----GRTLPYGTLVLATGAAPR 114 (408)
T ss_dssp -----SCEEECSEEEECCCEEEC
T ss_pred -----CCEEECCEEEECCCCCCC
Confidence 568999999999998653
No 161
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.59 E-value=5.2e-08 Score=105.61 Aligned_cols=106 Identities=22% Similarity=0.258 Sum_probs=72.2
Q ss_pred ccEEEECCCHHHHHHHHHHHh---hchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCC
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQ---LCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSD 184 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~---~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~ 184 (644)
.||||||||+||+++|..|++ . |.+|+|||+.+..... + .+..+...+
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~------g~~Vtlie~~~~~~~~--------~-~~~~~~~g~-------------- 55 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGS------GHEVTLISANDYFQFV--------P-SNPWVGVGW-------------- 55 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGG------GSEEEEECSSSEEECG--------G-GHHHHHHTS--------------
T ss_pred CcEEEECCcHHHHHHHHHHhccCCC------cCEEEEEeCCCCCccc--------C-CccccccCc--------------
Confidence 689999999999999999999 5 9999999998753221 0 010110000
Q ss_pred cEEEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCccc
Q 006466 185 KFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKE 264 (644)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~ 264 (644)
....++...+.+.+++.|++++. .+|+.+..++ . .|.+.+
T Consensus 56 ------------------------~~~~~~~~~l~~~~~~~gv~~~~-~~v~~id~~~-~---~V~~~~----------- 95 (437)
T 3sx6_A 56 ------------------------KERDDIAFPIRHYVERKGIHFIA-QSAEQIDAEA-Q---NITLAD----------- 95 (437)
T ss_dssp ------------------------SCHHHHEEECHHHHHTTTCEEEC-SCEEEEETTT-T---EEEETT-----------
T ss_pred ------------------------cCHHHHHHHHHHHHHHCCCEEEE-eEEEEEEcCC-C---EEEECC-----------
Confidence 01122222345566678999985 4788886554 2 366655
Q ss_pred ccccceEEEcCEEEEecCCCCc
Q 006466 265 NFQRGVELRGRITLLAEGCRGS 286 (644)
Q Consensus 265 ~~~~g~~i~a~~vV~A~G~~s~ 286 (644)
|.++.+|.||+|+|.++.
T Consensus 96 ----g~~i~~d~lviAtG~~~~ 113 (437)
T 3sx6_A 96 ----GNTVHYDYLMIATGPKLA 113 (437)
T ss_dssp ----SCEEECSEEEECCCCEEC
T ss_pred ----CCEEECCEEEECCCCCcC
Confidence 567999999999998764
No 162
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.58 E-value=3.1e-07 Score=99.77 Aligned_cols=41 Identities=49% Similarity=0.752 Sum_probs=38.1
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcc
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHI 152 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~ 152 (644)
..+||+|||||++||+||+.|++. |++|+|+|+++.+|+.+
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~------g~~v~v~E~~~~~GG~~ 44 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKA------GLSVAVIEARDRVGGRT 44 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSCTTC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC------CCcEEEEECCCCCCCce
Confidence 358999999999999999999999 99999999999998865
No 163
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.57 E-value=4.2e-07 Score=102.77 Aligned_cols=42 Identities=33% Similarity=0.475 Sum_probs=36.2
Q ss_pred ccccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCc
Q 006466 104 ESMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAH 151 (644)
Q Consensus 104 ~~~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~ 151 (644)
+...+||||||||++|+++|+.|++. |++|+||||.+..++.
T Consensus 43 ~~~~~dvvIIG~G~aGl~aA~~l~~~------G~~V~liE~~~~~gg~ 84 (623)
T 3pl8_A 43 MDIKYDVVIVGSGPIGCTYARELVGA------GYKVAMFDIGEIDSGL 84 (623)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCCCSSS
T ss_pred ccccCCEEEECCcHHHHHHHHHHHhC------CCcEEEEeccCCCCCc
Confidence 33569999999999999999999999 9999999999877653
No 164
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.57 E-value=1e-07 Score=104.29 Aligned_cols=39 Identities=28% Similarity=0.492 Sum_probs=31.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCC
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVG 149 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g 149 (644)
.+||||||||+||+++|..|++. .+|.+|+|||+.+.++
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~----~~g~~Vtvie~~~~~~ 41 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRL----DPEAHVTMIDQASRIS 41 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHH----CTTSEEEEECCC----
T ss_pred CCcEEEECCCHHHHHHHHHHHhh----CcCCCEEEEECCCccc
Confidence 36899999999999999999987 4589999999998764
No 165
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=98.57 E-value=1.3e-07 Score=105.75 Aligned_cols=71 Identities=15% Similarity=0.309 Sum_probs=50.8
Q ss_pred HHHHHHHHHhcCCEEecCceEEEEEEcC---CCcEEEEEeCcCccccCCCcccccccceEEEcC-EEEEecCCCCcchHH
Q 006466 215 VRWLGGKAEELGVEIYPGFAASEILYDA---DNKVIGIGTNDMGIAKDGSKKENFQRGVELRGR-ITLLAEGCRGSLSEK 290 (644)
Q Consensus 215 ~~~L~~~a~~~Gv~i~~g~~v~~v~~~~---~g~v~gV~~~d~g~~~~G~~~~~~~~g~~i~a~-~vV~A~G~~s~l~~~ 290 (644)
..+|...+.+.+++|++++.|++|+.++ +++++||++.+ .+|+. .+++|+ -||+|.|+.. ..+
T Consensus 230 ~ayL~p~~~r~NL~V~t~a~V~rIl~d~~~~~~ra~GV~~~~----~~G~~-------~~v~A~kEVILsAGa~~--SPq 296 (583)
T 3qvp_A 230 REWLLPNYQRPNLQVLTGQYVGKVLLSQNGTTPRAVGVEFGT----HKGNT-------HNVYAKHEVLLAAGSAV--SPT 296 (583)
T ss_dssp HHHTTTTTTCTTEEEECSCEEEEEEEECSSSSCEEEEEEEES----STTCE-------EEEEEEEEEEECSCTTT--HHH
T ss_pred HHHHHHhhcCCCcEEEcCCEEEEEEeccCCCCCEEEEEEEEe----cCCcE-------EEEEECCEEEEeCCccC--CHH
Confidence 3445444456689999999999999984 47889998763 23442 578886 6999999886 455
Q ss_pred HHHHcCCC
Q 006466 291 LIKNFKLR 298 (644)
Q Consensus 291 l~~~~~~~ 298 (644)
|....|+-
T Consensus 297 LL~lSGIG 304 (583)
T 3qvp_A 297 ILEYSGIG 304 (583)
T ss_dssp HHHHTTBS
T ss_pred HHHHcCCC
Confidence 55555554
No 166
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=98.56 E-value=7.7e-08 Score=107.56 Aligned_cols=51 Identities=16% Similarity=0.339 Sum_probs=39.7
Q ss_pred hcCCEEecCceEEEEEEcC-CCcEEEEEeCcCccccCCCcccccccceEEEc-CEEEEecCCCC
Q 006466 224 ELGVEIYPGFAASEILYDA-DNKVIGIGTNDMGIAKDGSKKENFQRGVELRG-RITLLAEGCRG 285 (644)
Q Consensus 224 ~~Gv~i~~g~~v~~v~~~~-~g~v~gV~~~d~g~~~~G~~~~~~~~g~~i~a-~~vV~A~G~~s 285 (644)
+.+++|++++.|++|+.++ +++++||++.+ .+|+ ..+++| +-||+|.|+..
T Consensus 218 r~Nl~v~~~a~v~ri~~~~~~~~a~GV~~~~----~~g~-------~~~v~A~keVILsaGa~~ 270 (577)
T 3q9t_A 218 KPNITIVPEVHSKRLIINEADRTCKGVTVVT----AAGN-------ELNFFADREVILSQGVFE 270 (577)
T ss_dssp CTTEEEECSEEEEEEEEETTTTEEEEEEEEE----TTSC-------EEEEEEEEEEEECSHHHH
T ss_pred CCCeEEEcCcEEEEEEEeCCCCEEEEEEEEe----CCCc-------EEEEEeeeEEEEcccccC
Confidence 4579999999999999984 46889998864 2343 256888 67999999865
No 167
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.55 E-value=9e-08 Score=103.48 Aligned_cols=109 Identities=23% Similarity=0.330 Sum_probs=70.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcE
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (644)
..||||||||+||+++|+.|++. ++|.+|+|||+.+..+... .+..+...+.. .+.+
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~----~~g~~Vtlie~~~~~~~~~---------~~~~~~~g~~~----------~~~~ 58 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNL----MPDLKITLISDRPYFGFTP---------AFPHLAMGWRK----------FEDI 58 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHH----CTTCEEEEECSSSEEECGG---------GHHHHHHTCSC----------GGGS
T ss_pred CCCEEEECccHHHHHHHHHHHcC----CCCCeEEEECCCCCCCcCC---------CcchhccCccC----------HHHH
Confidence 46899999999999999999993 1289999999998654311 11111111000 0000
Q ss_pred EEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCccccc
Q 006466 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (644)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~ 266 (644)
...+.+.+++.|++++.+ +|+.+..+. . .|.+.+
T Consensus 59 ----------------------------~~~~~~~~~~~gv~~~~~-~v~~id~~~--~--~v~~~~------------- 92 (430)
T 3h28_A 59 ----------------------------SVPLAPLLPKFNIEFINE-KAESIDPDA--N--TVTTQS------------- 92 (430)
T ss_dssp ----------------------------EEESTTTGGGGTEEEECS-CEEEEETTT--T--EEEETT-------------
T ss_pred ----------------------------HHHHHHHHHhcCCEEEEE-EEEEEECCC--C--EEEECC-------------
Confidence 000223345578999875 788886543 2 356654
Q ss_pred ccceEEEcCEEEEecCCCCc
Q 006466 267 QRGVELRGRITLLAEGCRGS 286 (644)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~ 286 (644)
|.++.+|.+|+|+|.++.
T Consensus 93 --g~~i~~d~liiAtG~~~~ 110 (430)
T 3h28_A 93 --GKKIEYDYLVIATGPKLV 110 (430)
T ss_dssp --CCEEECSEEEECCCCEEE
T ss_pred --CcEEECCEEEEcCCcccc
Confidence 567999999999998754
No 168
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.55 E-value=3.3e-08 Score=106.99 Aligned_cols=107 Identities=24% Similarity=0.388 Sum_probs=68.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcEE
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKFW 187 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 187 (644)
..|||||||+||+++|..|++. .++.+|+|||+.+...... .+.++..... ..+.
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~----~~~~~VtlI~~~~~~~~~p---------~l~~v~~g~~----------~~~~-- 57 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNL----MPDLKITLISDRPYFGFTP---------AFPHLAMGWR----------KFED-- 57 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH----CTTCEEEEECSSSEEECGG---------GHHHHHHTCS----------CGGG--
T ss_pred CcEEEECCCHHHHHHHHHHhcc----CcCCeEEEEcCCCCCccCc---------cHHHHhcCCC----------CHHH--
Confidence 4699999999999999999987 3368999999987532110 0111110000 0000
Q ss_pred EeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccccc
Q 006466 188 FLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQ 267 (644)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~~ 267 (644)
+.++ +.+.+++.||+++.+ +|++|..++ + .|++.+
T Consensus 58 -------i~~~-------------------~~~~~~~~gv~~i~~-~v~~Id~~~--~--~V~~~~-------------- 92 (430)
T 3hyw_A 58 -------ISVP-------------------LAPLLPKFNIEFINE-KAESIDPDA--N--TVTTQS-------------- 92 (430)
T ss_dssp -------SEEE-------------------STTTGGGGTEEEECS-CEEEEETTT--T--EEEETT--------------
T ss_pred -------hhhc-------------------HHHHHHHCCcEEEEe-EEEEEECCC--C--EEEECC--------------
Confidence 0000 112234568999877 688886654 3 366765
Q ss_pred cceEEEcCEEEEecCCCC
Q 006466 268 RGVELRGRITLLAEGCRG 285 (644)
Q Consensus 268 ~g~~i~a~~vV~A~G~~s 285 (644)
|.++.+|++|+|+|++.
T Consensus 93 -g~~i~YD~LViAtG~~~ 109 (430)
T 3hyw_A 93 -GKKIEYDYLVIATGPKL 109 (430)
T ss_dssp -CCEEECSEEEECCCCEE
T ss_pred -CCEEECCEEEEeCCCCc
Confidence 67899999999999753
No 169
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.54 E-value=1.7e-07 Score=107.47 Aligned_cols=43 Identities=35% Similarity=0.571 Sum_probs=38.8
Q ss_pred cccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCccc
Q 006466 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHII 153 (644)
Q Consensus 105 ~~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~ 153 (644)
...+||||||||+||+++|+.|++. |++|+|||+.+.+|+...
T Consensus 389 ~~~~~VvIIGgG~AGl~aA~~La~~------G~~V~liE~~~~~GG~~~ 431 (690)
T 3k30_A 389 ESDARVLVVGAGPSGLEAARALGVR------GYDVVLAEAGRDLGGRVT 431 (690)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHH------TCEEEEECSSSSSCTHHH
T ss_pred cccceEEEECCCHHHHHHHHHHHHC------CCeEEEEecCCCCCCEee
Confidence 3468999999999999999999999 999999999998887654
No 170
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.54 E-value=3.7e-07 Score=97.05 Aligned_cols=110 Identities=20% Similarity=0.161 Sum_probs=84.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcE
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (644)
..+|+|||||+.|+.+|..|++. |.+|+|+|+.+.+....
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~------g~~Vtlv~~~~~~~~~~---------------------------------- 184 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSG------GYQLDVVAPCEQVMPGL---------------------------------- 184 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSSSSSTTT----------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhC------CCeEEEEecCcchhhcc----------------------------------
Confidence 45799999999999999999999 99999999987543200
Q ss_pred EEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCccccc
Q 006466 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (644)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~ 266 (644)
....+.+.|.+.+++.|++++++++|+++..+++ .+.|.+.+
T Consensus 185 -----------------------~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~--~~~v~~~~------------- 226 (384)
T 2v3a_A 185 -----------------------LHPAAAKAVQAGLEGLGVRFHLGPVLASLKKAGE--GLEAHLSD------------- 226 (384)
T ss_dssp -----------------------SCHHHHHHHHHHHHTTTCEEEESCCEEEEEEETT--EEEEEETT-------------
T ss_pred -----------------------cCHHHHHHHHHHHHHcCCEEEeCCEEEEEEecCC--EEEEEECC-------------
Confidence 0123466778888889999999999999987653 23577655
Q ss_pred ccceEEEcCEEEEecCCCCcchHHHHHHcCCC
Q 006466 267 QRGVELRGRITLLAEGCRGSLSEKLIKNFKLR 298 (644)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~l~~~l~~~~~~~ 298 (644)
|.++.+|.||.|+|.++... +.+..++.
T Consensus 227 --g~~i~~d~vv~a~G~~p~~~--l~~~~g~~ 254 (384)
T 2v3a_A 227 --GEVIPCDLVVSAVGLRPRTE--LAFAAGLA 254 (384)
T ss_dssp --SCEEEESEEEECSCEEECCH--HHHHTTCC
T ss_pred --CCEEECCEEEECcCCCcCHH--HHHHCCCC
Confidence 67899999999999887642 44455554
No 171
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.53 E-value=8.9e-08 Score=101.30 Aligned_cols=35 Identities=40% Similarity=0.550 Sum_probs=31.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCC
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEV 148 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~ 148 (644)
.-||||||||+||+++|..|++. | +|+|||+.+..
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~------g-~V~lie~~~~~ 42 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQT------Y-EVTVIDKEPVP 42 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTT------S-EEEEECSSSSC
T ss_pred CCcEEEECCcHHHHHHHHHHhhc------C-CEEEEECCCCC
Confidence 46999999999999999999998 9 99999998754
No 172
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.51 E-value=5.3e-08 Score=104.64 Aligned_cols=107 Identities=17% Similarity=0.292 Sum_probs=70.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCCe--EEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCc
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLS--VCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDK 185 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~--V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~ 185 (644)
.||||||||+||+++|..|++. |.+ |+|||+.+..+.... .+.. .++.. . ...+.
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~------g~~~~V~li~~~~~~~y~~~---~l~~----~~~~g----~------~~~~~ 59 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAE------GFEGRISLIGDEPHLPYDRP---SLSK----AVLDG----S------LERPP 59 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCSEEEEEECSSSSSBCSG---GGGT----HHHHT----S------SSSCC
T ss_pred CCEEEEcccHHHHHHHHHHHcc------CcCCeEEEEECCCCCCcCCc---cccH----HHhCC----C------CCHHH
Confidence 5899999999999999999998 776 999999886543110 0000 00000 0 00000
Q ss_pred EEEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccc
Q 006466 186 FWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKEN 265 (644)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~ 265 (644)
+ +. ..+..++.|++++.+++|+.+..+. . .|.+.+
T Consensus 60 ---------~-~~-------------------~~~~~~~~~i~~~~~~~v~~id~~~--~--~v~~~~------------ 94 (410)
T 3ef6_A 60 ---------I-LA-------------------EADWYGEARIDMLTGPEVTALDVQT--R--TISLDD------------ 94 (410)
T ss_dssp ---------B-SS-------------------CTTHHHHTTCEEEESCCEEEEETTT--T--EEEETT------------
T ss_pred ---------h-cC-------------------CHHHHHHCCCEEEeCCEEEEEECCC--C--EEEECC------------
Confidence 0 00 0122345799999999999986554 2 356655
Q ss_pred cccceEEEcCEEEEecCCCC
Q 006466 266 FQRGVELRGRITLLAEGCRG 285 (644)
Q Consensus 266 ~~~g~~i~a~~vV~A~G~~s 285 (644)
|.++.+|.+|+|+|.++
T Consensus 95 ---g~~~~~d~lvlAtG~~p 111 (410)
T 3ef6_A 95 ---GTTLSADAIVIATGSRA 111 (410)
T ss_dssp ---SCEEECSEEEECCCEEE
T ss_pred ---CCEEECCEEEEccCCcc
Confidence 67899999999999764
No 173
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=98.51 E-value=2.6e-07 Score=109.67 Aligned_cols=124 Identities=21% Similarity=0.266 Sum_probs=78.6
Q ss_pred cccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCC
Q 006466 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSD 184 (644)
Q Consensus 105 ~~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~ 184 (644)
...+|||||||||||++||+.|++. |++|+|||+.+.+|+.+.. + ++
T Consensus 126 ~~~~dVvVIGaGpAGl~AA~~la~~------G~~V~lie~~~~~GG~~~~--~--~k----------------------- 172 (965)
T 2gag_A 126 HVHTDVLVVGAGPAGLAAAREASRS------GARVMLLDERAEAGGTLLD--T--AG----------------------- 172 (965)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSSGGGGG--S--SC-----------------------
T ss_pred ccCCCEEEECCCHHHHHHHHHHHhC------CCcEEEEeCCCCCCceecc--C--Cc-----------------------
Confidence 3468999999999999999999999 9999999999888864321 0 00
Q ss_pred cEEEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhc-CCEEecCceEEEEEEcCCCcEEEEEeCc--Ccccc-CC
Q 006466 185 KFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEEL-GVEIYPGFAASEILYDADNKVIGIGTND--MGIAK-DG 260 (644)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~-Gv~i~~g~~v~~v~~~~~g~v~gV~~~d--~g~~~-~G 260 (644)
..+. . ....++...+.+++.+. +++++.++.|.++..+ +.+..+.... ..+.. ++
T Consensus 173 --~~i~---------------~--~~~~~~~~~~~~~l~~~~~v~~~~~~~V~~i~~~--~~~~~v~~~~~~~~v~~~~~ 231 (965)
T 2gag_A 173 --EQID---------------G--MDSSAWIEQVTSELAEAEETTHLQRTTVFGSYDA--NYLIAAQRRTVHLDGPSGPG 231 (965)
T ss_dssp --CEET---------------T--EEHHHHHHHHHHHHHHSTTEEEESSEEEEEEETT--TEEEEEEECSTTCSSCCCTT
T ss_pred --cccC---------------C--CCHHHHHHHHHHHHhhcCCcEEEeCCEEEeeecC--CceeeeEeeccccccccccc
Confidence 0000 0 01234445566666664 8999999999888532 3343332211 00000 00
Q ss_pred CcccccccceEEEcCEEEEecCCCC
Q 006466 261 SKKENFQRGVELRGRITLLAEGCRG 285 (644)
Q Consensus 261 ~~~~~~~~g~~i~a~~vV~A~G~~s 285 (644)
.+ -+.+.++.+|.||+|+|++.
T Consensus 232 ~~---~~~~~~i~~d~lVlATGs~p 253 (965)
T 2gag_A 232 VS---RERIWHIRAKQVVLATGAHE 253 (965)
T ss_dssp CC---SEEEEEEEEEEEEECCCEEE
T ss_pred CC---CCceEEEECCEEEECCCCcc
Confidence 00 01235799999999999864
No 174
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.51 E-value=3.8e-08 Score=105.61 Aligned_cols=110 Identities=18% Similarity=0.157 Sum_probs=70.0
Q ss_pred ccEEEECCCHHHHHHHHHHHh---hchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCC
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQ---LCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSD 184 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~---~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~ 184 (644)
.||||||||+||+++|+.|++ . |.+|+|||+.+....... +. .
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~------g~~V~vie~~~~~~~~~~----~~------------~------------ 47 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGS------KADVKVINKSRFSYFRPA----LP------------H------------ 47 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGG------GSEEEEEESSSEEEECCS----SC------------C------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCC------CCeEEEEeCCCCceeccc----hh------------h------------
Confidence 379999999999999999999 6 999999999885432100 00 0
Q ss_pred cEEEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCccc
Q 006466 185 KFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKE 264 (644)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~ 264 (644)
. .........+ ...+.+.+++.|++++.+ +|+++..++ . . |++.+ .++.
T Consensus 48 ---~---------~~~~~~~~~~-------~~~~~~~~~~~gv~~~~~-~v~~i~~~~-~-~--V~~~~----g~~~--- 96 (409)
T 3h8l_A 48 ---V---------AIGVRDVDEL-------KVDLSEALPEKGIQFQEG-TVEKIDAKS-S-M--VYYTK----PDGS--- 96 (409)
T ss_dssp ---C---------CSSCCCCCCE-------EEEHHHHTGGGTCEEEEC-EEEEEETTT-T-E--EEEEC----TTSC---
T ss_pred ---c---------ccCCcCHHHH-------HHHHHHHHhhCCeEEEEe-eEEEEeCCC-C-E--EEEcc----CCcc---
Confidence 0 0000000011 112455556789999988 888886554 2 2 44433 1111
Q ss_pred ccccceEEEcCEEEEecCCCCc
Q 006466 265 NFQRGVELRGRITLLAEGCRGS 286 (644)
Q Consensus 265 ~~~~g~~i~a~~vV~A~G~~s~ 286 (644)
..++.+|.||+|+|.++.
T Consensus 97 ----~~~~~~d~lViAtG~~~~ 114 (409)
T 3h8l_A 97 ----MAEEEYDYVIVGIGAHLA 114 (409)
T ss_dssp ----EEEEECSEEEECCCCEEC
T ss_pred ----cceeeCCEEEECCCCCcC
Confidence 246999999999998654
No 175
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.51 E-value=7e-07 Score=96.54 Aligned_cols=112 Identities=20% Similarity=0.284 Sum_probs=87.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcE
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (644)
...|+|||||+.|+.+|..|++. |.+|+++|+.+.+.... +
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~------G~~Vtlv~~~~~~l~~~-----~---------------------------- 189 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKA------NMHVTLLDTAARVLERV-----T---------------------------- 189 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSTTTTT-----S----------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhC------CCEEEEEEeCCccccch-----h----------------------------
Confidence 35799999999999999999999 99999999987542200 0
Q ss_pred EEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEc-CCCcEEEEEeCcCccccCCCcccc
Q 006466 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYD-ADNKVIGIGTNDMGIAKDGSKKEN 265 (644)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~-~~g~v~gV~~~d~g~~~~G~~~~~ 265 (644)
...+.+.+.+.+++.||+++++++|+++..+ +++.+.+|.+.+
T Consensus 190 ------------------------~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~------------ 233 (431)
T 1q1r_A 190 ------------------------APPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCED------------ 233 (431)
T ss_dssp ------------------------CHHHHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETT------------
T ss_pred ------------------------hHHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCC------------
Confidence 0234566777888899999999999999862 335676788765
Q ss_pred cccceEEEcCEEEEecCCCCcchHHHHHHcCCC
Q 006466 266 FQRGVELRGRITLLAEGCRGSLSEKLIKNFKLR 298 (644)
Q Consensus 266 ~~~g~~i~a~~vV~A~G~~s~l~~~l~~~~~~~ 298 (644)
|.++.+|.||.|+|.++.. .+.+..++.
T Consensus 234 ---G~~i~~D~Vv~a~G~~p~~--~l~~~~gl~ 261 (431)
T 1q1r_A 234 ---GTRLPADLVIAGIGLIPNC--ELASAAGLQ 261 (431)
T ss_dssp ---SCEEECSEEEECCCEEECC--HHHHHTTCC
T ss_pred ---CCEEEcCEEEECCCCCcCc--chhhccCCC
Confidence 6789999999999988753 356666765
No 176
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.51 E-value=2.2e-07 Score=101.88 Aligned_cols=38 Identities=32% Similarity=0.516 Sum_probs=33.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCC
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVG 149 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g 149 (644)
+||||||||+||+++|+.|++. ++|.+|+|||+.+..+
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~----~~g~~V~lie~~~~~~ 74 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRN----DENANVVTLEKGEIYS 74 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH----CTTCEEEEECSSSCCS
T ss_pred ceEEEECCCHHHHHHHHHHHhh----CcCCcEEEEECCCCCC
Confidence 5999999999999999999985 2389999999987654
No 177
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.50 E-value=1.4e-07 Score=100.35 Aligned_cols=109 Identities=24% Similarity=0.255 Sum_probs=68.8
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCC--CeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccC
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVD--LSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSS 183 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G--~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~ 183 (644)
+.+||||||||+||+++|+.|++. | .+|+|+|+.+ |.. . .+. +++.+
T Consensus 3 ~~~dvvIIG~G~aGl~aA~~l~~~------g~~~~V~lie~~~--g~~-~------~~~---~l~~~------------- 51 (384)
T 2v3a_A 3 ERAPLVIIGTGLAGYNLAREWRKL------DGETPLLMITADD--GRS-Y------SKP---MLSTG------------- 51 (384)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHTT------CSSSCEEEECSSC--CCE-E------CGG---GGGGT-------------
T ss_pred CCCcEEEECChHHHHHHHHHHHhh------CCCCCEEEEECCC--CCc-c------Ccc---cccHH-------------
Confidence 358999999999999999999998 7 6799999875 210 0 000 00000
Q ss_pred CcEEEeccCCccccCCCCCCCCcEEEcHHHHHH-HHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCc
Q 006466 184 DKFWFLTKDRAFSLPSPFSNRGNYVISLSQLVR-WLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSK 262 (644)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~-~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~ 262 (644)
++. . .....+.. .+.+.+++.|++++.+++|+.+..++ . .|.+.+
T Consensus 52 -------------~~~------~--~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~-~---~v~~~~--------- 97 (384)
T 2v3a_A 52 -------------FSK------N--KDADGLAMAEPGAMAEQLNARILTHTRVTGIDPGH-Q---RIWIGE--------- 97 (384)
T ss_dssp -------------TTT------T--CCHHHHEEECHHHHHHHTTCEEECSCCCCEEEGGG-T---EEEETT---------
T ss_pred -------------HhC------C--CCHHHhhccCHHHHHHhCCcEEEeCCEEEEEECCC-C---EEEECC---------
Confidence 000 0 00111111 23344466899999999888886543 2 245443
Q ss_pred ccccccceEEEcCEEEEecCCCCc
Q 006466 263 KENFQRGVELRGRITLLAEGCRGS 286 (644)
Q Consensus 263 ~~~~~~g~~i~a~~vV~A~G~~s~ 286 (644)
.++.+|.+|+|+|.++.
T Consensus 98 -------~~~~~d~lviAtG~~p~ 114 (384)
T 2v3a_A 98 -------EEVRYRDLVLAWGAEPI 114 (384)
T ss_dssp -------EEEECSEEEECCCEEEC
T ss_pred -------cEEECCEEEEeCCCCcC
Confidence 46999999999997653
No 178
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.49 E-value=2.5e-07 Score=100.69 Aligned_cols=118 Identities=12% Similarity=0.105 Sum_probs=72.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcEE
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKFW 187 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 187 (644)
+||||||||+||+++|..|++. .+|.+|+|||+.+.++... ..+...+.. ... ....+
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~----~~g~~V~lie~~~~~~~~~--------~~~~~~~~g------~~~-~~~~~--- 58 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIAD----HPDADVTAYEMNDNISFLS--------CGIALYLGK------EIK-NNDPR--- 58 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH----CTTCEEEEEESSSCCCBCG--------GGHHHHHTT------CBG-GGCGG---
T ss_pred CeEEEECCCHHHHHHHHHHHhh----CcCCcEEEEECCCCCCccc--------ccchhhhcC------Ccc-cCCHH---
Confidence 5899999999999999999987 3589999999987654311 011100000 000 00000
Q ss_pred EeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccccc
Q 006466 188 FLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQ 267 (644)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~~ 267 (644)
.+ ...+.+.+++.|++++.+++|+.+..++ +.+ .+... .+|+
T Consensus 59 ------~~-------------------~~~~~~~~~~~gv~~~~~~~v~~i~~~~-~~v-~v~~~-----~~g~------ 100 (452)
T 2cdu_A 59 ------GL-------------------FYSSPEELSNLGANVQMRHQVTNVDPET-KTI-KVKDL-----ITNE------ 100 (452)
T ss_dssp ------GG-------------------BSCCHHHHHHTTCEEEESEEEEEEEGGG-TEE-EEEET-----TTCC------
T ss_pred ------Hh-------------------hhcCHHHHHHcCCEEEeCCEEEEEEcCC-CEE-EEEec-----CCCc------
Confidence 00 0011233456799999999998887654 333 33321 1111
Q ss_pred cceEEEcCEEEEecCCCCc
Q 006466 268 RGVELRGRITLLAEGCRGS 286 (644)
Q Consensus 268 ~g~~i~a~~vV~A~G~~s~ 286 (644)
+.++.+|.+|+|+|.++.
T Consensus 101 -~~~~~~d~lviAtGs~p~ 118 (452)
T 2cdu_A 101 -EKTEAYDKLIMTTGSKPT 118 (452)
T ss_dssp -EEEEECSEEEECCCEEEC
T ss_pred -eEEEECCEEEEccCCCcC
Confidence 467999999999997654
No 179
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.48 E-value=7.4e-07 Score=96.87 Aligned_cols=101 Identities=16% Similarity=0.141 Sum_probs=80.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcE
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (644)
..+|+|||||+.|+.+|..|++. |.+|+|+|+.+.+... ++
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~------g~~Vtlv~~~~~~l~~------~~--------------------------- 207 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGL------GAKTHLFEMFDAPLPS------FD--------------------------- 207 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSSTT------SC---------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhc------CCEEEEEEeCCchhhh------hh---------------------------
Confidence 35799999999999999999999 9999999998754210 00
Q ss_pred EEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCccccc
Q 006466 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (644)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~ 266 (644)
..+.+.|.+.+++.||+++++++|+++..++++.+ .|.+.+
T Consensus 208 -------------------------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~------------- 248 (450)
T 1ges_A 208 -------------------------PMISETLVEVMNAEGPQLHTNAIPKAVVKNTDGSL-TLELED------------- 248 (450)
T ss_dssp -------------------------HHHHHHHHHHHHHHSCEEECSCCEEEEEECTTSCE-EEEETT-------------
T ss_pred -------------------------HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCcEE-EEEECC-------------
Confidence 13456677788889999999999999987654433 577665
Q ss_pred ccceEEEcCEEEEecCCCCcc
Q 006466 267 QRGVELRGRITLLAEGCRGSL 287 (644)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~l 287 (644)
|.++.+|.||.|+|.++.+
T Consensus 249 --g~~i~~D~vv~a~G~~p~~ 267 (450)
T 1ges_A 249 --GRSETVDCLIWAIGREPAN 267 (450)
T ss_dssp --SCEEEESEEEECSCEEESC
T ss_pred --CcEEEcCEEEECCCCCcCC
Confidence 6689999999999987653
No 180
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.48 E-value=2.7e-07 Score=100.23 Aligned_cols=38 Identities=26% Similarity=0.401 Sum_probs=33.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCC
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVG 149 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g 149 (644)
+||||||||+||+++|..|++. .+|.+|+|||+.+.++
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~----~~g~~V~lie~~~~~~ 38 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNL----HPDAEIQWYEKGDFIS 38 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH----CTTSEEEEEESSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHh----CcCCeEEEEECCCccC
Confidence 3899999999999999999986 3489999999988654
No 181
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.47 E-value=4.3e-07 Score=99.56 Aligned_cols=102 Identities=19% Similarity=0.188 Sum_probs=80.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcE
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (644)
...|+|||||..|+.+|..|++. |.+|+++|+.+.+... ++
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~------g~~Vtlv~~~~~~l~~------~d--------------------------- 225 (479)
T 2hqm_A 185 PKKVVVVGAGYIGIELAGVFHGL------GSETHLVIRGETVLRK------FD--------------------------- 225 (479)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHT------TCEEEEECSSSSSCTT------SC---------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHc------CCceEEEEeCCccccc------cC---------------------------
Confidence 35799999999999999999999 9999999998764320 00
Q ss_pred EEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCccccc
Q 006466 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (644)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~ 266 (644)
..+.+.|.+.+++.||+++++++|+++..++++.+..|.+.+
T Consensus 226 -------------------------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~------------- 267 (479)
T 2hqm_A 226 -------------------------ECIQNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMND------------- 267 (479)
T ss_dssp -------------------------HHHHHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETT-------------
T ss_pred -------------------------HHHHHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECC-------------
Confidence 233556777778889999999999999876555344677765
Q ss_pred ccc-eEEEcCEEEEecCCCCcc
Q 006466 267 QRG-VELRGRITLLAEGCRGSL 287 (644)
Q Consensus 267 ~~g-~~i~a~~vV~A~G~~s~l 287 (644)
| .++.+|.||.|+|.++..
T Consensus 268 --G~~~i~~D~vv~a~G~~p~~ 287 (479)
T 2hqm_A 268 --SKSIDDVDELIWTIGRKSHL 287 (479)
T ss_dssp --SCEEEEESEEEECSCEEECC
T ss_pred --CcEEEEcCEEEECCCCCCcc
Confidence 6 689999999999987653
No 182
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.46 E-value=5.3e-07 Score=98.16 Aligned_cols=100 Identities=20% Similarity=0.250 Sum_probs=78.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcE
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (644)
..+|+|||||++|+.+|..|++. |.+|+|+|+.+.+... .
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~------g~~V~lv~~~~~~l~~------~---------------------------- 206 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRL------GAEVIVLEYMDRILPT------M---------------------------- 206 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSCTT------S----------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHc------CCEEEEEecCCccccc------c----------------------------
Confidence 35799999999999999999999 9999999998754210 0
Q ss_pred EEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCccccc
Q 006466 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (644)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~ 266 (644)
...+.+.|.+.+++.||+++++++|+++..+++ .+ .|.+.+
T Consensus 207 ------------------------~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~-~v-~v~~~~------------- 247 (455)
T 2yqu_A 207 ------------------------DLEVSRAAERVFKKQGLTIRTGVRVTAVVPEAK-GA-RVELEG------------- 247 (455)
T ss_dssp ------------------------CHHHHHHHHHHHHHHTCEEECSCCEEEEEEETT-EE-EEEETT-------------
T ss_pred ------------------------CHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCC-EE-EEEECC-------------
Confidence 024456677778888999999999999987653 23 466544
Q ss_pred ccceEEEcCEEEEecCCCCcc
Q 006466 267 QRGVELRGRITLLAEGCRGSL 287 (644)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~l 287 (644)
|.++.+|.||.|+|.++..
T Consensus 248 --g~~i~~D~vv~A~G~~p~~ 266 (455)
T 2yqu_A 248 --GEVLEADRVLVAVGRRPYT 266 (455)
T ss_dssp --SCEEEESEEEECSCEEECC
T ss_pred --CeEEEcCEEEECcCCCcCC
Confidence 5689999999999988753
No 183
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.46 E-value=6.3e-07 Score=103.45 Aligned_cols=39 Identities=41% Similarity=0.721 Sum_probs=36.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCc
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAH 151 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~ 151 (644)
.+||+|||||++|+++|+.|++. |++|+|+|+.+.+|+.
T Consensus 336 ~~~v~viG~G~~Gl~aA~~l~~~------g~~v~v~E~~~~~ggr 374 (776)
T 4gut_A 336 NKSVIIIGAGPAGLAAARQLHNF------GIKVTVLEAKDRIGGR 374 (776)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHH------TCEEEEECSSSSSCTT
T ss_pred CCeEEEECCCHHHHHHHHHHHHC------CCcEEEEecccceece
Confidence 58999999999999999999999 9999999999888773
No 184
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.45 E-value=1.3e-07 Score=102.92 Aligned_cols=39 Identities=36% Similarity=0.592 Sum_probs=36.3
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCC
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGA 150 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~ 150 (644)
..+||+|||||||||++|..|++. |++|+|||+.+.+|+
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~------G~~V~v~e~~~~~GG 159 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAK------GYEVHVYDRYDRMGG 159 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHH------TCCEEEECSSSSCST
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC------CCeEEEEeccCCCCC
Confidence 357999999999999999999999 999999999988776
No 185
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.45 E-value=2.7e-07 Score=103.38 Aligned_cols=116 Identities=21% Similarity=0.169 Sum_probs=72.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcEE
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKFW 187 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 187 (644)
.||+|||||+||+++|..|++. +++.+|+|||+.+.++... -.+...+.... .+
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~----~~~~~V~lie~~~~~~~~~--------~~l~~~~~~~~---~~----------- 55 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRL----SETAEIIMFERGEYVSFAN--------CGLPYHISGEI---AQ----------- 55 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH----CSSSEEEEECSSSCSSBCG--------GGHHHHHTSSS---CC-----------
T ss_pred CcEEEECCCHHHHHHHHHHHhh----CcCCCEEEEECCCCccccc--------cCchHHhcCCc---CC-----------
Confidence 4899999999999999999987 4578999999998765311 01111100000 00
Q ss_pred EeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccccc
Q 006466 188 FLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQ 267 (644)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~~ 267 (644)
....+.+.+...+++.|++++++++|+++..+. +.+ .+... .+|+
T Consensus 56 ----------------------~~~~~~~~~~~~~~~~~i~~~~~~~V~~id~~~-~~v-~~~~~-----~~g~------ 100 (565)
T 3ntd_A 56 ----------------------RSALVLQTPESFKARFNVEVRVKHEVVAIDRAA-KLV-TVRRL-----LDGS------ 100 (565)
T ss_dssp ----------------------GGGGBCCCHHHHHHHHCCEEETTEEEEEEETTT-TEE-EEEET-----TTCC------
T ss_pred ----------------------hHHhhccCHHHHHHhcCcEEEECCEEEEEECCC-CEE-EEEec-----CCCC------
Confidence 000001112333455789999999999997654 332 33321 1121
Q ss_pred cceEEEcCEEEEecCCCC
Q 006466 268 RGVELRGRITLLAEGCRG 285 (644)
Q Consensus 268 ~g~~i~a~~vV~A~G~~s 285 (644)
..++.+|.||+|+|.++
T Consensus 101 -~~~~~~d~lviAtG~~p 117 (565)
T 3ntd_A 101 -EYQESYDTLLLSPGAAP 117 (565)
T ss_dssp -EEEEECSEEEECCCEEE
T ss_pred -eEEEECCEEEECCCCCC
Confidence 24799999999999854
No 186
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.44 E-value=1.3e-07 Score=101.30 Aligned_cols=107 Identities=18% Similarity=0.243 Sum_probs=69.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCC--eEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCc
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDL--SVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDK 185 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~--~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~ 185 (644)
.||||||||+||+++|..|++. |. +|+|||+.+..+.... . +...+..
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~------g~~~~V~lie~~~~~~y~~~--------~---l~~~~l~------------- 51 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQA------KYPGRIALINDEKHLPYQRP--------P---LSKAYLK------------- 51 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT------TCCSCEEEECCSSSSSBCSG--------G---GGTGGGG-------------
T ss_pred CCEEEEcChHHHHHHHHHHHhh------CcCCCEEEEeCCCCCCCCCc--------c---CCHHHHC-------------
Confidence 5899999999999999999999 87 8999999885543110 0 0000000
Q ss_pred EEEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccc
Q 006466 186 FWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKEN 265 (644)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~ 265 (644)
.... +. .+ .....+...+.|++++. .+|+.+..+. . .|.+.+
T Consensus 52 -----~~~~---~~------~~-------~~~~~~~~~~~~i~~~~-~~v~~id~~~--~--~v~~~~------------ 93 (404)
T 3fg2_P 52 -----SGGD---PN------SL-------MFRPEKFFQDQAIELIS-DRMVSIDREG--R--KLLLAS------------ 93 (404)
T ss_dssp -----SCCC---TT------SS-------BSSCHHHHHHTTEEEEC-CCEEEEETTT--T--EEEESS------------
T ss_pred -----CCCC---HH------Hc-------cCCCHHHHHhCCCEEEE-EEEEEEECCC--C--EEEECC------------
Confidence 0000 00 00 00012334567899998 8898886554 2 356655
Q ss_pred cccceEEEcCEEEEecCCCC
Q 006466 266 FQRGVELRGRITLLAEGCRG 285 (644)
Q Consensus 266 ~~~g~~i~a~~vV~A~G~~s 285 (644)
|.++.+|.+|+|+|.++
T Consensus 94 ---g~~~~~d~lvlAtG~~p 110 (404)
T 3fg2_P 94 ---GTAIEYGHLVLATGARN 110 (404)
T ss_dssp ---SCEEECSEEEECCCEEE
T ss_pred ---CCEEECCEEEEeeCCCc
Confidence 67899999999999754
No 187
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.43 E-value=3.6e-07 Score=103.09 Aligned_cols=52 Identities=17% Similarity=0.399 Sum_probs=39.9
Q ss_pred cccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCC-C-------CCCCcccccCccChHH
Q 006466 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKG-A-------EVGAHIISGNVFEPRA 162 (644)
Q Consensus 105 ~~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~-~-------~~g~~~~~g~~i~~~~ 162 (644)
...+||+||||||||++||+.|++. |++|+|||+. + .+|+.+...++++.+.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~------g~~v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~ 164 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKY------GAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKL 164 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHT------TCCEEEECCCCCCTTCCCCCTTHHHHHHSHHHHHH
T ss_pred cccccEEEECCCccHHHHHHHHHhC------CCeEEEEeccCCcccccccccCceEeccCCCchHH
Confidence 3469999999999999999999999 9999999983 2 2455444444554443
No 188
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.41 E-value=3e-07 Score=101.23 Aligned_cols=114 Identities=25% Similarity=0.324 Sum_probs=75.3
Q ss_pred cccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCC
Q 006466 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSD 184 (644)
Q Consensus 105 ~~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~ 184 (644)
...+||||||||+||+++|+.|++. .+|+|||+.+.+|+...... .
T Consensus 106 ~~~~dVvIIGgG~aGl~aA~~L~~~-------~~V~vie~~~~~GG~~~~~~-------------------~-------- 151 (493)
T 1y56_A 106 RVVVDVAIIGGGPAGIGAALELQQY-------LTVALIEERGWLGGDMWLKG-------------------I-------- 151 (493)
T ss_dssp EEEESCCEECCSHHHHHHHHHHTTT-------CCEEEECTTSSSSCSGGGTC-------------------S--------
T ss_pred cccCCEEEECccHHHHHHHHHHHhc-------CCEEEEeCCCCCCCeeeccc-------------------c--------
Confidence 3468999999999999999999974 79999999998876422100 0
Q ss_pred cEEEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCccc
Q 006466 185 KFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKE 264 (644)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~ 264 (644)
.. ..+ .. ...++...+.+.+ +.|+++++++.|.++..+++ .+..+...+ |+
T Consensus 152 --~~------~g~--------~~--~~~~~~~~l~~~l-~~~v~~~~~~~v~~i~~~~~-~~~~~~~~~------~~--- 202 (493)
T 1y56_A 152 --KQ------EGF--------NK--DSRKVVEELVGKL-NENTKIYLETSALGVFDKGE-YFLVPVVRG------DK--- 202 (493)
T ss_dssp --EE------TTT--------TE--EHHHHHHHHHHTC-CTTEEEETTEEECCCEECSS-SEEEEEEET------TE---
T ss_pred --cc------CCC--------CC--CHHHHHHHHHHHH-hcCCEEEcCCEEEEEEcCCc-EEEEEEecC------Ce---
Confidence 00 000 01 2344455555554 56899999999988877653 332222222 10
Q ss_pred ccccceEEEcCEEEEecCCCC
Q 006466 265 NFQRGVELRGRITLLAEGCRG 285 (644)
Q Consensus 265 ~~~~g~~i~a~~vV~A~G~~s 285 (644)
-.++.+|.+|+|+|...
T Consensus 203 ----~~~~~~d~lvlAtGa~~ 219 (493)
T 1y56_A 203 ----LIEILAKRVVLATGAID 219 (493)
T ss_dssp ----EEEEEESCEEECCCEEE
T ss_pred ----EEEEECCEEEECCCCCc
Confidence 13689999999999765
No 189
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.40 E-value=1.8e-06 Score=93.86 Aligned_cols=99 Identities=21% Similarity=0.193 Sum_probs=79.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcE
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (644)
...|+|||+|..|+.+|..|++. |.+|+++|+.+.+.... +
T Consensus 147 ~~~vvViGgG~~g~E~A~~l~~~------g~~Vtlv~~~~~~l~~~-----~---------------------------- 187 (452)
T 3oc4_A 147 SQTVAVIGAGPIGMEAIDFLVKM------KKTVHVFESLENLLPKY-----F---------------------------- 187 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSSSSSTTT-----C----------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCeEEEEEccCcccccc-----C----------------------------
Confidence 35799999999999999999999 99999999987643200 0
Q ss_pred EEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCccccc
Q 006466 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (644)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~ 266 (644)
-..+.+.+.+.+++.||+++++++|+++..++ +.+ .|.+.+
T Consensus 188 ------------------------d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~~v-~v~~~~------------- 228 (452)
T 3oc4_A 188 ------------------------DKEMVAEVQKSLEKQAVIFHFEETVLGIEETA-NGI-VLETSE------------- 228 (452)
T ss_dssp ------------------------CHHHHHHHHHHHHTTTEEEEETCCEEEEEECS-SCE-EEEESS-------------
T ss_pred ------------------------CHHHHHHHHHHHHHcCCEEEeCCEEEEEEccC-CeE-EEEECC-------------
Confidence 02346677888888999999999999998655 445 677654
Q ss_pred ccceEEEcCEEEEecCCCCc
Q 006466 267 QRGVELRGRITLLAEGCRGS 286 (644)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~ 286 (644)
| ++.+|.||.|+|.++.
T Consensus 229 --g-~i~aD~Vv~A~G~~p~ 245 (452)
T 3oc4_A 229 --Q-EISCDSGIFALNLHPQ 245 (452)
T ss_dssp --C-EEEESEEEECSCCBCC
T ss_pred --C-EEEeCEEEECcCCCCC
Confidence 4 7999999999998775
No 190
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.39 E-value=1.3e-06 Score=95.61 Aligned_cols=106 Identities=22% Similarity=0.294 Sum_probs=79.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcE
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (644)
..+|+|||||+.|+.+|..|++. |.+|+|+|+.+.+... ++
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~------g~~Vtlv~~~~~~l~~------~~--------------------------- 223 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRL------GSKVTVVEFQPQIGAS------MD--------------------------- 223 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSSSS------SC---------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHc------CCEEEEEEeCCccccc------cC---------------------------
Confidence 35799999999999999999999 9999999998764320 00
Q ss_pred EEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCccccc
Q 006466 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (644)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~ 266 (644)
..+.+.|.+.+++.||+++++++|+++..++++..+.|.+.+. .+|
T Consensus 224 -------------------------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~---~~g------ 269 (478)
T 1v59_A 224 -------------------------GEVAKATQKFLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDT---KTN------ 269 (478)
T ss_dssp -------------------------HHHHHHHHHHHHHTTCEEECSEEEEEEEEETTTTEEEEEEEET---TTT------
T ss_pred -------------------------HHHHHHHHHHHHHCCCEEEeCCEEEEEEEecCCCeEEEEEEEc---CCC------
Confidence 2346667888888999999999999998631233445665420 111
Q ss_pred ccceEEEcCEEEEecCCCCc
Q 006466 267 QRGVELRGRITLLAEGCRGS 286 (644)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~ 286 (644)
++.++.+|.||.|+|.++.
T Consensus 270 -~~~~~~~D~vv~a~G~~p~ 288 (478)
T 1v59_A 270 -KQENLEAEVLLVAVGRRPY 288 (478)
T ss_dssp -EEEEEEESEEEECSCEEEC
T ss_pred -CceEEECCEEEECCCCCcC
Confidence 1467999999999997765
No 191
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.38 E-value=1.6e-06 Score=94.49 Aligned_cols=98 Identities=24% Similarity=0.244 Sum_probs=78.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcEE
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKFW 187 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 187 (644)
..|+|||||..|+.+|..|++. |.+|+|+|+.+.+... ++
T Consensus 167 ~~vvVvGgG~~g~e~A~~l~~~------G~~Vtlv~~~~~~l~~------~~---------------------------- 206 (463)
T 2r9z_A 167 KRVAIIGAGYIGIELAGLLRSF------GSEVTVVALEDRLLFQ------FD---------------------------- 206 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSSTT------SC----------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhc------CCEEEEEEcCCccccc------cC----------------------------
Confidence 4799999999999999999999 9999999998754210 00
Q ss_pred EeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccccc
Q 006466 188 FLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQ 267 (644)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~~ 267 (644)
..+.+.|.+.+++.||+++++++|+++..++++ ..|.+.+
T Consensus 207 ------------------------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~--~~v~~~~-------------- 246 (463)
T 2r9z_A 207 ------------------------PLLSATLAENMHAQGIETHLEFAVAALERDAQG--TTLVAQD-------------- 246 (463)
T ss_dssp ------------------------HHHHHHHHHHHHHTTCEEESSCCEEEEEEETTE--EEEEETT--------------
T ss_pred ------------------------HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCe--EEEEEeC--------------
Confidence 123455777788899999999999999876544 3577655
Q ss_pred cce-EEEcCEEEEecCCCCc
Q 006466 268 RGV-ELRGRITLLAEGCRGS 286 (644)
Q Consensus 268 ~g~-~i~a~~vV~A~G~~s~ 286 (644)
|. ++.+|.||.|+|.++.
T Consensus 247 -G~~~i~~D~vv~a~G~~p~ 265 (463)
T 2r9z_A 247 -GTRLEGFDSVIWAVGRAPN 265 (463)
T ss_dssp -CCEEEEESEEEECSCEEES
T ss_pred -CcEEEEcCEEEECCCCCcC
Confidence 56 7999999999998765
No 192
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.37 E-value=1.9e-07 Score=102.77 Aligned_cols=41 Identities=20% Similarity=0.346 Sum_probs=35.1
Q ss_pred cccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCC
Q 006466 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVG 149 (644)
Q Consensus 105 ~~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g 149 (644)
+..+||||||||+||++||..|++. .+|.+|+|||+.+.++
T Consensus 9 ~~~~~vvIIGgG~AGl~aA~~L~~~----~~g~~V~lie~~~~~~ 49 (493)
T 1m6i_A 9 PSHVPFLLIGGGTAAFAAARSIRAR----DPGARVLIVSEDPELP 49 (493)
T ss_dssp CSEEEEEEESCSHHHHHHHHHHHHH----STTCEEEEEESSSSCC
T ss_pred CCcCCEEEECChHHHHHHHHHHHhc----CCCCeEEEEeCCCCCC
Confidence 3468999999999999999998876 3489999999988664
No 193
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.37 E-value=9.7e-07 Score=95.85 Aligned_cols=99 Identities=19% Similarity=0.215 Sum_probs=78.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcE
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (644)
..+|+|||||++|+.+|..|++. |.+|+|+|+.+.+.... +
T Consensus 149 ~~~vvIiG~G~~g~e~A~~l~~~------g~~Vtlv~~~~~~l~~~-----~---------------------------- 189 (447)
T 1nhp_A 149 VNNVVVIGSGYIGIEAAEAFAKA------GKKVTVIDILDRPLGVY-----L---------------------------- 189 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSSSTTTTT-----C----------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHC------CCeEEEEecCccccccc-----C----------------------------
Confidence 57899999999999999999999 99999999987543200 0
Q ss_pred EEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCccccc
Q 006466 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (644)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~ 266 (644)
...+.+.+.+.+++.||+++++++|+++..+ +.+..|.++
T Consensus 190 ------------------------~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~--~~v~~v~~~-------------- 229 (447)
T 1nhp_A 190 ------------------------DKEFTDVLTEEMEANNITIATGETVERYEGD--GRVQKVVTD-------------- 229 (447)
T ss_dssp ------------------------CHHHHHHHHHHHHTTTEEEEESCCEEEEECS--SBCCEEEES--------------
T ss_pred ------------------------CHHHHHHHHHHHHhCCCEEEcCCEEEEEEcc--CcEEEEEEC--------------
Confidence 0244667888888899999999999999754 344445553
Q ss_pred ccceEEEcCEEEEecCCCCc
Q 006466 267 QRGVELRGRITLLAEGCRGS 286 (644)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~ 286 (644)
+.++.+|.||+|+|.++.
T Consensus 230 --~~~i~~d~vi~a~G~~p~ 247 (447)
T 1nhp_A 230 --KNAYDADLVVVAVGVRPN 247 (447)
T ss_dssp --SCEEECSEEEECSCEEES
T ss_pred --CCEEECCEEEECcCCCCC
Confidence 357999999999998764
No 194
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.37 E-value=3.1e-06 Score=93.30 Aligned_cols=100 Identities=17% Similarity=0.219 Sum_probs=79.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcE
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (644)
...|+|||||+.|+.+|..|++. |.+|+|+|+.+.+... ++
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~------g~~Vtlv~~~~~~l~~------~d--------------------------- 216 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRL------GIDSYIFARGNRILRK------FD--------------------------- 216 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTT------TCEEEEECSSSSSCTT------SC---------------------------
T ss_pred CCeEEEECChHHHHHHHHHHHHc------CCeEEEEecCCccCcc------cc---------------------------
Confidence 35799999999999999999999 9999999998764320 00
Q ss_pred EEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCccccc
Q 006466 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (644)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~ 266 (644)
..+.+.+.+.+++.||+++++++|+++..++++.+ .|.+.+
T Consensus 217 -------------------------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~-~v~~~~------------- 257 (500)
T 1onf_A 217 -------------------------ESVINVLENDMKKNNINIVTFADVVEIKKVSDKNL-SIHLSD------------- 257 (500)
T ss_dssp -------------------------HHHHHHHHHHHHHTTCEEECSCCEEEEEESSTTCE-EEEETT-------------
T ss_pred -------------------------hhhHHHHHHHHHhCCCEEEECCEEEEEEEcCCceE-EEEECC-------------
Confidence 23455677888889999999999999987654433 566655
Q ss_pred ccceE-EEcCEEEEecCCCCc
Q 006466 267 QRGVE-LRGRITLLAEGCRGS 286 (644)
Q Consensus 267 ~~g~~-i~a~~vV~A~G~~s~ 286 (644)
|.+ +.+|.||.|+|.++.
T Consensus 258 --g~~~~~~D~vi~a~G~~p~ 276 (500)
T 1onf_A 258 --GRIYEHFDHVIYCVGRSPD 276 (500)
T ss_dssp --SCEEEEESEEEECCCBCCT
T ss_pred --CcEEEECCEEEECCCCCcC
Confidence 556 999999999998875
No 195
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.34 E-value=3.2e-06 Score=90.62 Aligned_cols=106 Identities=17% Similarity=0.234 Sum_probs=82.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcE
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (644)
..+|+|||||..|+.+|..|++. |.+|+++|+.+.+.... +
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~------g~~Vtlv~~~~~~l~~~-----~---------------------------- 185 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTA------GVHVSLVETQPRLMSRA-----A---------------------------- 185 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSSSSSTTT-----S----------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhC------CCEEEEEEeCCcccccc-----c----------------------------
Confidence 35799999999999999999999 99999999987643200 0
Q ss_pred EEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCccccc
Q 006466 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (644)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~ 266 (644)
...+.+.+.+.+++.||+++++++|+++. + + .|++.+
T Consensus 186 ------------------------~~~~~~~l~~~l~~~GV~i~~~~~v~~i~--~-~---~v~~~~------------- 222 (408)
T 2gqw_A 186 ------------------------PATLADFVARYHAAQGVDLRFERSVTGSV--D-G---VVLLDD------------- 222 (408)
T ss_dssp ------------------------CHHHHHHHHHHHHHTTCEEEESCCEEEEE--T-T---EEEETT-------------
T ss_pred ------------------------CHHHHHHHHHHHHHcCcEEEeCCEEEEEE--C-C---EEEECC-------------
Confidence 02345667778888999999999999997 3 3 466655
Q ss_pred ccceEEEcCEEEEecCCCCcchHHHHHHcCCC
Q 006466 267 QRGVELRGRITLLAEGCRGSLSEKLIKNFKLR 298 (644)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~l~~~l~~~~~~~ 298 (644)
|.++.+|.||.|+|.++.. .+.+..++.
T Consensus 223 --g~~i~~D~vi~a~G~~p~~--~l~~~~gl~ 250 (408)
T 2gqw_A 223 --GTRIAADMVVVGIGVLAND--ALARAAGLA 250 (408)
T ss_dssp --SCEEECSEEEECSCEEECC--HHHHHHTCC
T ss_pred --CCEEEcCEEEECcCCCccH--HHHHhCCCC
Confidence 6789999999999988753 355556665
No 196
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.32 E-value=5.6e-07 Score=97.48 Aligned_cols=37 Identities=24% Similarity=0.526 Sum_probs=31.4
Q ss_pred cEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCC
Q 006466 109 DVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVG 149 (644)
Q Consensus 109 DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g 149 (644)
+||||||||||++||..|+++ +++.+|+|||+.+...
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~----g~~~~V~lie~~~~~~ 38 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRL----DKESDIIIFEKDRDMS 38 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHH----CSSSCEEEEESSSCSS
T ss_pred eEEEECCCHHHHHHHHHHHhC----CCCCcEEEEeCCCCCC
Confidence 699999999999999999998 2236899999987543
No 197
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.29 E-value=2.3e-06 Score=93.11 Aligned_cols=102 Identities=19% Similarity=0.292 Sum_probs=77.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcE
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (644)
..+|+|||||+.|+.+|..|++. |.+|+|+|+.+.+... +
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~------g~~Vtlv~~~~~~l~~------~---------------------------- 209 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANF------GTKVTILEGAGEILSG------F---------------------------- 209 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSSSSSTT------S----------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHc------CCcEEEEEcCCccccc------c----------------------------
Confidence 35899999999999999999999 9999999998754310 0
Q ss_pred EEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCccccc
Q 006466 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (644)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~ 266 (644)
...+.+.+.+.+++.||+++++++|+++..++++ + .|.+.+ +|
T Consensus 210 ------------------------~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~-~-~v~~~~-----~g------ 252 (455)
T 1ebd_A 210 ------------------------EKQMAAIIKKRLKKKGVEVVTNALAKGAEEREDG-V-TVTYEA-----NG------ 252 (455)
T ss_dssp ------------------------CHHHHHHHHHHHHHTTCEEEESEEEEEEEEETTE-E-EEEEEE-----TT------
T ss_pred ------------------------CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCe-E-EEEEEe-----CC------
Confidence 0234566777788899999999999999876532 3 344431 11
Q ss_pred ccceEEEcCEEEEecCCCCc
Q 006466 267 QRGVELRGRITLLAEGCRGS 286 (644)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~ 286 (644)
++.++.+|.||.|+|.++.
T Consensus 253 -~~~~~~~D~vv~a~G~~p~ 271 (455)
T 1ebd_A 253 -ETKTIDADYVLVTVGRRPN 271 (455)
T ss_dssp -EEEEEEESEEEECSCEEES
T ss_pred -ceeEEEcCEEEECcCCCcc
Confidence 1467999999999997764
No 198
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.28 E-value=5.2e-06 Score=85.28 Aligned_cols=102 Identities=19% Similarity=0.214 Sum_probs=78.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcE
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (644)
...|+|||+|+.|+.+|..|++. |.+|+++++.+.+..
T Consensus 145 ~~~v~ViG~G~~g~e~A~~l~~~------g~~Vtlv~~~~~~~~------------------------------------ 182 (320)
T 1trb_A 145 NQKVAVIGGGNTAVEEALYLSNI------ASEVHLIHRRDGFRA------------------------------------ 182 (320)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTT------SSEEEEECSSSSCCC------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhc------CCeEEEEEeCCcccc------------------------------------
Confidence 35799999999999999999998 999999998765321
Q ss_pred EEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccC-CCcccc
Q 006466 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKD-GSKKEN 265 (644)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~-G~~~~~ 265 (644)
...+.+.|.+.+++.||+++++++++++..++ +.+.+|.+.+. .+ |+
T Consensus 183 ------------------------~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~-~~v~~v~~~~~---~~~g~---- 230 (320)
T 1trb_A 183 ------------------------EKILIKRLMDKVENGNIILHTNRTLEEVTGDQ-MGVTGVRLRDT---QNSDN---- 230 (320)
T ss_dssp ------------------------CHHHHHHHHHHHHTSSEEEECSCEEEEEEECS-SSEEEEEEECC---TTCCC----
T ss_pred ------------------------CHHHHHHHHHhcccCCeEEEcCceeEEEEcCC-CceEEEEEEec---cCCCc----
Confidence 01234456677788999999999999998765 46767777541 11 22
Q ss_pred cccceEEEcCEEEEecCCCC
Q 006466 266 FQRGVELRGRITLLAEGCRG 285 (644)
Q Consensus 266 ~~~g~~i~a~~vV~A~G~~s 285 (644)
+.++.+|.||.|+|..+
T Consensus 231 ---~~~i~~D~vv~a~G~~p 247 (320)
T 1trb_A 231 ---IESLDVAGLFVAIGHSP 247 (320)
T ss_dssp ---CEEEECSEEEECSCEEE
T ss_pred ---eEEEEcCEEEEEeCCCC
Confidence 36799999999999665
No 199
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.28 E-value=2.9e-06 Score=92.62 Aligned_cols=105 Identities=19% Similarity=0.221 Sum_probs=78.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcE
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (644)
..+|+|||||++|+.+|..|++. |.+|+|+|+.+.+... +
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~------g~~Vtlv~~~~~~l~~------~---------------------------- 208 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRL------GAEVTLIEYMPEILPQ------G---------------------------- 208 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSSTT------S----------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHC------CCeEEEEEcCCccccc------c----------------------------
Confidence 35799999999999999999999 9999999998754320 0
Q ss_pred EEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCccccc
Q 006466 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (644)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~ 266 (644)
...+.+.|.+.+++.||+++++++|+++..+++ .+ .|.+.+ +.+|+
T Consensus 209 ------------------------~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~-~~-~v~~~~---~~~g~----- 254 (464)
T 2eq6_A 209 ------------------------DPETAALLRRALEKEGIRVRTKTKAVGYEKKKD-GL-HVRLEP---AEGGE----- 254 (464)
T ss_dssp ------------------------CHHHHHHHHHHHHHTTCEEECSEEEEEEEEETT-EE-EEEEEE---TTCCS-----
T ss_pred ------------------------CHHHHHHHHHHHHhcCCEEEcCCEEEEEEEeCC-EE-EEEEee---cCCCc-----
Confidence 023456677888889999999999999987653 33 455431 00122
Q ss_pred ccceEEEcCEEEEecCCCCcc
Q 006466 267 QRGVELRGRITLLAEGCRGSL 287 (644)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~l 287 (644)
..++.+|.||.|+|.++..
T Consensus 255 --~~~i~~D~vv~a~G~~p~~ 273 (464)
T 2eq6_A 255 --GEEVVVDKVLVAVGRKPRT 273 (464)
T ss_dssp --CEEEEESEEEECSCEEESC
T ss_pred --eeEEEcCEEEECCCcccCC
Confidence 1379999999999988764
No 200
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.28 E-value=3.9e-06 Score=91.18 Aligned_cols=101 Identities=22% Similarity=0.289 Sum_probs=79.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcE
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (644)
...|+|||||..|+.+|..|++. |.+|+++|+.+.+.... +
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~------g~~Vtlv~~~~~~l~~~-----~---------------------------- 189 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQ------NYNVNLIDGHERVLYKY-----F---------------------------- 189 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTT------TCEEEEEESSSSTTTTT-----S----------------------------
T ss_pred CCeEEEECcCHHHHHHHHHHHhc------CCEEEEEEcCCchhhhh-----h----------------------------
Confidence 35799999999999999999999 99999999987542200 0
Q ss_pred EEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCccccc
Q 006466 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (644)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~ 266 (644)
-..+.+.|.+.+++.||+++++++|+++..++ +.+..|.+ +
T Consensus 190 ------------------------~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~-~~v~~v~~-~------------- 230 (452)
T 2cdu_A 190 ------------------------DKEFTDILAKDYEAHGVNLVLGSKVAAFEEVD-DEIITKTL-D------------- 230 (452)
T ss_dssp ------------------------CHHHHHHHHHHHHHTTCEEEESSCEEEEEEET-TEEEEEET-T-------------
T ss_pred ------------------------hhhHHHHHHHHHHHCCCEEEcCCeeEEEEcCC-CeEEEEEe-C-------------
Confidence 02346667888888999999999999998643 55655654 3
Q ss_pred ccceEEEcCEEEEecCCCCcc
Q 006466 267 QRGVELRGRITLLAEGCRGSL 287 (644)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~l 287 (644)
|.++.+|.||.|+|.++..
T Consensus 231 --g~~i~~D~vv~a~G~~p~~ 249 (452)
T 2cdu_A 231 --GKEIKSDIAILCIGFRPNT 249 (452)
T ss_dssp --SCEEEESEEEECCCEEECC
T ss_pred --CCEEECCEEEECcCCCCCH
Confidence 5679999999999987753
No 201
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=98.27 E-value=6.7e-07 Score=102.25 Aligned_cols=40 Identities=33% Similarity=0.542 Sum_probs=36.7
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCc
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAH 151 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~ 151 (644)
..+||||||||+||+++|..|++. |++|+|||+.+.+|+.
T Consensus 372 ~~~~vvIIGgG~AGl~aA~~l~~~------g~~V~lie~~~~~gg~ 411 (671)
T 1ps9_A 372 QKKNLAVVGAGPAGLAFAINAAAR------GHQVTLFDAHSEIGGQ 411 (671)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTT------TCEEEEEESSSSSCTT
T ss_pred CCCeEEEECCCHHHHHHHHHHHhC------CCeEEEEeCCCCCCCe
Confidence 358999999999999999999999 9999999999888763
No 202
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.27 E-value=3.1e-06 Score=92.77 Aligned_cols=98 Identities=19% Similarity=0.357 Sum_probs=77.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcE
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (644)
..+|+|||||++|+.+|..|++. |.+|+|+|+.+.+... +
T Consensus 186 ~~~vvViGgG~~g~e~A~~l~~~------g~~Vtlv~~~~~~l~~------~---------------------------- 225 (480)
T 3cgb_A 186 VEDVTIIGGGAIGLEMAETFVEL------GKKVRMIERNDHIGTI------Y---------------------------- 225 (480)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHT------TCEEEEECCGGGTTSS------S----------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhc------CCeEEEEEeCCchhhc------C----------------------------
Confidence 46899999999999999999999 9999999998754320 0
Q ss_pred EEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCccccc
Q 006466 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (644)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~ 266 (644)
...+.+.|.+.+++.||+++++++|+++..+ +.+..|.+.+
T Consensus 226 ------------------------~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~--~~v~~v~~~~------------- 266 (480)
T 3cgb_A 226 ------------------------DGDMAEYIYKEADKHHIEILTNENVKAFKGN--ERVEAVETDK------------- 266 (480)
T ss_dssp ------------------------CHHHHHHHHHHHHHTTCEEECSCCEEEEEES--SBEEEEEETT-------------
T ss_pred ------------------------CHHHHHHHHHHHHHcCcEEEcCCEEEEEEcC--CcEEEEEECC-------------
Confidence 0234566788888899999999999999764 4465666543
Q ss_pred ccceEEEcCEEEEecCCCCc
Q 006466 267 QRGVELRGRITLLAEGCRGS 286 (644)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~ 286 (644)
.++.+|.||.|+|.++.
T Consensus 267 ---~~i~~D~vi~a~G~~p~ 283 (480)
T 3cgb_A 267 ---GTYKADLVLVSVGVKPN 283 (480)
T ss_dssp ---EEEECSEEEECSCEEES
T ss_pred ---CEEEcCEEEECcCCCcC
Confidence 57999999999997653
No 203
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=98.26 E-value=4.9e-07 Score=100.78 Aligned_cols=70 Identities=9% Similarity=0.184 Sum_probs=47.8
Q ss_pred HHHHHHHHHhcCCEEecCceEEEEEEc---CC-CcEEEEEeCcCccccCC-CcccccccceEEEc-CEEEEecCCCCcch
Q 006466 215 VRWLGGKAEELGVEIYPGFAASEILYD---AD-NKVIGIGTNDMGIAKDG-SKKENFQRGVELRG-RITLLAEGCRGSLS 288 (644)
Q Consensus 215 ~~~L~~~a~~~Gv~i~~g~~v~~v~~~---~~-g~v~gV~~~d~g~~~~G-~~~~~~~~g~~i~a-~~vV~A~G~~s~l~ 288 (644)
..+|.....+.+++|++++.|++|+.+ ++ ++++||++.+ .+| + ..+++| +-||+|.|+.. .
T Consensus 211 ~ayL~p~~~r~NL~Vlt~a~V~rIl~~~~~~g~~rA~GVe~~~----~~g~~-------~~~v~A~kEVILsAGai~--S 277 (566)
T 3fim_B 211 TAYLRPAQSRPNLSVLINAQVTKLVNSGTTNGLPAFRCVEYAE----QEGAP-------TTTVCAKKEVVLSAGSVG--T 277 (566)
T ss_dssp HHTHHHHTTCTTEEEESSCEEEEEECCEEETTEEECCEEEEES----STTSC-------CEEEEEEEEEEECCHHHH--H
T ss_pred HHHhhhhccCCCeEEECCCEEEEEEeecCCCCCCEEEEEEEEE----CCCce-------EEEEEeeeEEEEecCCcC--C
Confidence 344554445568999999999999987 22 5778998764 223 3 257888 78999999764 3
Q ss_pred HHHHHHcCC
Q 006466 289 EKLIKNFKL 297 (644)
Q Consensus 289 ~~l~~~~~~ 297 (644)
.+|....|+
T Consensus 278 PqlL~lSGI 286 (566)
T 3fim_B 278 PILLQLSGI 286 (566)
T ss_dssp HHHHHHTTE
T ss_pred hHHHHhcCC
Confidence 444444443
No 204
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.26 E-value=4e-06 Score=88.50 Aligned_cols=102 Identities=24% Similarity=0.367 Sum_probs=79.5
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcEE
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKFW 187 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 187 (644)
.+|+|||||+.|+.+|..|++. |.+|+++|+.+.+.. ++
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~------g~~Vtlv~~~~~~l~-------~~---------------------------- 182 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEA------GYHVKLIHRGAMFLG-------LD---------------------------- 182 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHT------TCEEEEECSSSCCTT-------CC----------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhC------CCEEEEEeCCCeecc-------CC----------------------------
Confidence 5799999999999999999999 999999999875421 10
Q ss_pred EeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccccc
Q 006466 188 FLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQ 267 (644)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~~ 267 (644)
..+.+.+.+.+++.||+++++++|+++. . . +|.+.+
T Consensus 183 ------------------------~~~~~~l~~~l~~~gV~i~~~~~v~~i~--~-~---~v~~~~-------------- 218 (367)
T 1xhc_A 183 ------------------------EELSNMIKDMLEETGVKFFLNSELLEAN--E-E---GVLTNS-------------- 218 (367)
T ss_dssp ------------------------HHHHHHHHHHHHHTTEEEECSCCEEEEC--S-S---EEEETT--------------
T ss_pred ------------------------HHHHHHHHHHHHHCCCEEEcCCEEEEEE--e-e---EEEECC--------------
Confidence 2345667788888999999999999886 2 2 366655
Q ss_pred cceEEEcCEEEEecCCCCcchHHHHHHcCCC
Q 006466 268 RGVELRGRITLLAEGCRGSLSEKLIKNFKLR 298 (644)
Q Consensus 268 ~g~~i~a~~vV~A~G~~s~l~~~l~~~~~~~ 298 (644)
|. +.+|.||.|+|..+... +.+..++.
T Consensus 219 -g~-i~~D~vi~a~G~~p~~~--ll~~~gl~ 245 (367)
T 1xhc_A 219 -GF-IEGKVKICAIGIVPNVD--LARRSGIH 245 (367)
T ss_dssp -EE-EECSCEEEECCEEECCH--HHHHTTCC
T ss_pred -CE-EEcCEEEECcCCCcCHH--HHHhCCCC
Confidence 66 99999999999887642 55555554
No 205
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.26 E-value=3e-06 Score=90.46 Aligned_cols=36 Identities=31% Similarity=0.485 Sum_probs=31.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCC
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~ 147 (644)
..|||||||+||+++|..|++. +++.+|+|||+.+.
T Consensus 3 KkVvIIG~G~AG~~aA~~L~~~----~~~~~Vtlie~~~~ 38 (401)
T 3vrd_B 3 RKVVVVGGGTGGATAAKYIKLA----DPSIEVTLIEPNET 38 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH----CTTSEEEEECSCSS
T ss_pred CEEEEECCcHHHHHHHHHHHhc----CcCCeEEEEeCCCC
Confidence 3699999999999999999987 33579999999875
No 206
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.25 E-value=4.7e-06 Score=91.76 Aligned_cols=99 Identities=20% Similarity=0.239 Sum_probs=79.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcE
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (644)
...|+|||||+.|+.+|..|++. |.+|+++|+.+.+... +
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~------g~~Vtlv~~~~~~l~~------~---------------------------- 221 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTEL------GVPVTVVASQDHVLPY------E---------------------------- 221 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHT------TCCEEEECSSSSSSCC------S----------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHc------CCeEEEEEcCCccccc------c----------------------------
Confidence 35799999999999999999999 9999999998754320 0
Q ss_pred EEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCccccc
Q 006466 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (644)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~ 266 (644)
...+.+.|.+.+++.||+|+++++|+++..++++ + .|.+.+
T Consensus 222 ------------------------d~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~-v-~v~~~~------------- 262 (499)
T 1xdi_A 222 ------------------------DADAALVLEESFAERGVRLFKNARAASVTRTGAG-V-LVTMTD------------- 262 (499)
T ss_dssp ------------------------SHHHHHHHHHHHHHTTCEEETTCCEEEEEECSSS-E-EEEETT-------------
T ss_pred ------------------------CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCE-E-EEEECC-------------
Confidence 0234666788888999999999999999876533 4 466554
Q ss_pred ccceEEEcCEEEEecCCCCc
Q 006466 267 QRGVELRGRITLLAEGCRGS 286 (644)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~ 286 (644)
|.++.+|.||.|+|.++.
T Consensus 263 --g~~i~aD~Vv~a~G~~p~ 280 (499)
T 1xdi_A 263 --GRTVEGSHALMTIGSVPN 280 (499)
T ss_dssp --SCEEEESEEEECCCEEEC
T ss_pred --CcEEEcCEEEECCCCCcC
Confidence 568999999999998875
No 207
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.25 E-value=5.2e-06 Score=92.82 Aligned_cols=109 Identities=21% Similarity=0.325 Sum_probs=83.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcEE
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKFW 187 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 187 (644)
.+|+|||||..|+.+|..|++. |.+|+++|+.+.+... +
T Consensus 152 ~~vvViGgG~~g~e~A~~l~~~------g~~Vtlv~~~~~~l~~------~----------------------------- 190 (565)
T 3ntd_A 152 EHATVVGGGFIGLEMMESLHHL------GIKTTLLELADQVMTP------V----------------------------- 190 (565)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSSSSCTT------S-----------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhc------CCcEEEEEcCCccchh------c-----------------------------
Confidence 4799999999999999999999 9999999998754320 0
Q ss_pred EeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEc------------------CCCcEEEE
Q 006466 188 FLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYD------------------ADNKVIGI 249 (644)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~------------------~~g~v~gV 249 (644)
...+.+.+.+.+++.||++++++.++++..+ +++.+ .+
T Consensus 191 -----------------------~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~v 246 (565)
T 3ntd_A 191 -----------------------DREMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHL-SL 246 (565)
T ss_dssp -----------------------CHHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEE-EE
T ss_pred -----------------------CHHHHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcE-EE
Confidence 0234566777888899999999999999873 23433 35
Q ss_pred EeCcCccccCCCcccccccceEEEcCEEEEecCCCCcchHHHHHHcCCC
Q 006466 250 GTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLR 298 (644)
Q Consensus 250 ~~~d~g~~~~G~~~~~~~~g~~i~a~~vV~A~G~~s~l~~~l~~~~~~~ 298 (644)
.+.+ |.++.+|.||.|+|.++... +.+..++.
T Consensus 247 ~~~~---------------g~~i~~D~vi~a~G~~p~~~--l~~~~g~~ 278 (565)
T 3ntd_A 247 TLSN---------------GELLETDLLIMAIGVRPETQ--LARDAGLA 278 (565)
T ss_dssp EETT---------------SCEEEESEEEECSCEEECCH--HHHHHTCC
T ss_pred EEcC---------------CCEEEcCEEEECcCCccchH--HHHhCCcc
Confidence 5444 67899999999999987542 45556655
No 208
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.25 E-value=6.5e-06 Score=90.01 Aligned_cols=107 Identities=17% Similarity=0.206 Sum_probs=79.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcE
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (644)
...|+|||||+.|+.+|..|++. |.+|+|+|+.+.+.... +
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~------g~~Vtlv~~~~~~l~~~-----~---------------------------- 218 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRL------GADVTAVEFLGHVGGVG-----I---------------------------- 218 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSSCSS-----C----------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHc------CCEEEEEeccCccCCcc-----c----------------------------
Confidence 35799999999999999999999 99999999987543200 0
Q ss_pred EEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCccccc
Q 006466 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (644)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~ 266 (644)
...+.+.+.+.+++.||+++++++|+++..++++.+ .|.+.+. .++
T Consensus 219 ------------------------~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~~---~~~------ 264 (474)
T 1zmd_A 219 ------------------------DMEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKI-DVSIEAA---SGG------ 264 (474)
T ss_dssp ------------------------CHHHHHHHHHHHHHTTCEEECSEEEEEEEECTTSCE-EEEEEET---TSC------
T ss_pred ------------------------CHHHHHHHHHHHHHCCCEEEeCceEEEEEEcCCceE-EEEEEec---CCC------
Confidence 023456677888889999999999999987664423 3543210 011
Q ss_pred ccceEEEcCEEEEecCCCCcc
Q 006466 267 QRGVELRGRITLLAEGCRGSL 287 (644)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~l 287 (644)
++.++.+|.||.|+|.++..
T Consensus 265 -~~~~i~~D~vv~a~G~~p~~ 284 (474)
T 1zmd_A 265 -KAEVITCDVLLVCIGRRPFT 284 (474)
T ss_dssp -CCEEEEESEEEECSCEEECC
T ss_pred -CceEEEcCEEEECcCCCcCC
Confidence 25789999999999988753
No 209
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.23 E-value=2.8e-06 Score=92.52 Aligned_cols=99 Identities=23% Similarity=0.318 Sum_probs=75.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcE
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (644)
..+|+|||||++|+.+|..|++. |.+|+|+|+.+.+... +
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~------g~~Vtlv~~~~~~l~~------~---------------------------- 210 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKL------GAQVSVVEARERILPT------Y---------------------------- 210 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHH------TCEEEEECSSSSSSTT------S----------------------------
T ss_pred CCeEEEECcCHHHHHHHHHHHHC------CCeEEEEEcCCccccc------c----------------------------
Confidence 35799999999999999999999 9999999998764320 0
Q ss_pred EEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCccccc
Q 006466 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (644)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~ 266 (644)
...+.+.+.+.+++.||+++++++|+++.. + + + .|... +|+
T Consensus 211 ------------------------~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~-~-~-v-~v~~~------~G~----- 251 (458)
T 1lvl_A 211 ------------------------DSELTAPVAESLKKLGIALHLGHSVEGYEN-G-C-L-LANDG------KGG----- 251 (458)
T ss_dssp ------------------------CHHHHHHHHHHHHHHTCEEETTCEEEEEET-T-E-E-EEECS------SSC-----
T ss_pred ------------------------CHHHHHHHHHHHHHCCCEEEECCEEEEEEe-C-C-E-EEEEC------CCc-----
Confidence 023455677777888999999999999865 3 2 3 34422 222
Q ss_pred ccceEEEcCEEEEecCCCCc
Q 006466 267 QRGVELRGRITLLAEGCRGS 286 (644)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~ 286 (644)
..++.+|.||.|+|.++.
T Consensus 252 --~~~i~~D~vv~a~G~~p~ 269 (458)
T 1lvl_A 252 --QLRLEADRVLVAVGRRPR 269 (458)
T ss_dssp --CCEECCSCEEECCCEEEC
T ss_pred --eEEEECCEEEECcCCCcC
Confidence 157999999999998765
No 210
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.22 E-value=4.7e-06 Score=91.57 Aligned_cols=99 Identities=25% Similarity=0.275 Sum_probs=77.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcE
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (644)
...|+|||||..|+.+|..|++. |.+|+|+|+.+.+.... +
T Consensus 194 ~~~vvVIGgG~ig~E~A~~l~~~------g~~Vtlv~~~~~~l~~~-----~---------------------------- 234 (490)
T 2bc0_A 194 IKRVAVVGAGYIGVELAEAFQRK------GKEVVLIDVVDTCLAGY-----Y---------------------------- 234 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSSSTTTTT-----S----------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHC------CCeEEEEEcccchhhhH-----H----------------------------
Confidence 45799999999999999999999 99999999987543200 0
Q ss_pred EEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCccccc
Q 006466 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (644)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~ 266 (644)
-..+.+.+.+.+++.||+++++++|+++.. ++.+..|.+ +
T Consensus 235 ------------------------~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~--~~~v~~v~~-~------------- 274 (490)
T 2bc0_A 235 ------------------------DRDLTDLMAKNMEEHGIQLAFGETVKEVAG--NGKVEKIIT-D------------- 274 (490)
T ss_dssp ------------------------CHHHHHHHHHHHHTTTCEEEETCCEEEEEC--SSSCCEEEE-S-------------
T ss_pred ------------------------HHHHHHHHHHHHHhCCeEEEeCCEEEEEEc--CCcEEEEEE-C-------------
Confidence 023456677888889999999999999975 244444555 3
Q ss_pred ccceEEEcCEEEEecCCCCc
Q 006466 267 QRGVELRGRITLLAEGCRGS 286 (644)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~ 286 (644)
|.++.+|.||.|+|..+.
T Consensus 275 --g~~i~~D~Vi~a~G~~p~ 292 (490)
T 2bc0_A 275 --KNEYDVDMVILAVGFRPN 292 (490)
T ss_dssp --SCEEECSEEEECCCEEEC
T ss_pred --CcEEECCEEEECCCCCcC
Confidence 467999999999997654
No 211
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=98.22 E-value=6.8e-07 Score=106.84 Aligned_cols=57 Identities=14% Similarity=0.237 Sum_probs=46.2
Q ss_pred cCCCCccccCCCCCCCCcceeeCC---eeEEEecCCCCceeEEEecCCcccCCCCcceeeeCCC-CCceeeCCC
Q 006466 565 RDPKIPELVNLPEYAGPESRYCPA---RVYEYVPDEKNQLKLQINAQNCLHCKDFQACDIKDPK-QNIKWTVPE 634 (644)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~cpa---~~y~~~~~~~~~~~~~~~~~~c~~c~~~~~c~~~~p~-~~i~w~~p~ 634 (644)
.|++.|+.|. .|..+||. +++++.++. ....++ +.|+.|| .|...||+ ++|++..-+
T Consensus 948 id~~~C~~Cg------~C~~~CP~~~~~ai~~~~~~---~~~~~~-~~C~~Cg---~C~~~CP~~~Ai~~~~~~ 1008 (1025)
T 1gte_A 948 IDEEMCINCG------KCYMTCNDSGYQAIQFDPET---HLPTVT-DTCTGCT---LCLSVCPIIDCIRMVSRT 1008 (1025)
T ss_dssp ECTTTCCCCC------HHHHHHHHHSCSCEEECTTT---CCEEEC-TTCCCCC---HHHHHCSSTTTEEEEECC
T ss_pred EEcccCcccC------HHHHhcCccccCCEEEeCCC---ceEEeC-ccCCChh---HHHhhCCCCCCEEEecCc
Confidence 4888999987 79999997 888875432 146778 9999999 99999999 999886533
No 212
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.21 E-value=7.2e-06 Score=90.12 Aligned_cols=104 Identities=20% Similarity=0.237 Sum_probs=77.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcE
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (644)
...|+|||||+.|+.+|..|++...+ .|.+|+++++.+.+.... +
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~--~g~~V~~v~~~~~~~~~~-----l---------------------------- 224 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARA--LGTEVIQLFPEKGNMGKI-----L---------------------------- 224 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHH--HTCEEEEECSSSSTTTTT-----S----------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhh--cCCEEEEEecCccccccc-----C----------------------------
Confidence 35799999999999999999873111 178999999876432110 0
Q ss_pred EEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCccccc
Q 006466 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (644)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~ 266 (644)
...+.+.+.+.+++.||++++++.|+++..++ +.+ .|++.+
T Consensus 225 ------------------------~~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~~-~~~-~v~l~d------------- 265 (493)
T 1m6i_A 225 ------------------------PEYLSNWTMEKVRREGVKVMPNAIVQSVGVSS-GKL-LIKLKD------------- 265 (493)
T ss_dssp ------------------------CHHHHHHHHHHHHTTTCEEECSCCEEEEEEET-TEE-EEEETT-------------
T ss_pred ------------------------CHHHHHHHHHHHHhcCCEEEeCCEEEEEEecC-CeE-EEEECC-------------
Confidence 02345667778888999999999999997654 433 677765
Q ss_pred ccceEEEcCEEEEecCCCCc
Q 006466 267 QRGVELRGRITLLAEGCRGS 286 (644)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~ 286 (644)
|.++.+|.||.|.|.++.
T Consensus 266 --G~~i~aD~Vv~a~G~~pn 283 (493)
T 1m6i_A 266 --GRKVETDHIVAAVGLEPN 283 (493)
T ss_dssp --SCEEEESEEEECCCEEEC
T ss_pred --CCEEECCEEEECCCCCcc
Confidence 678999999999998875
No 213
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=98.21 E-value=5.6e-07 Score=98.08 Aligned_cols=38 Identities=29% Similarity=0.349 Sum_probs=34.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCC--CeEEEEcCCCCCCC
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVD--LSVCVVEKGAEVGA 150 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G--~~V~viEk~~~~g~ 150 (644)
.+||+||||||||+.+|..|++. | .+|+|||+.+.+++
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~------g~~~~V~vie~~~~~gg 45 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKH------HSRAHVDIYEKQLVPFG 45 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH------CSSCEEEEECSSSSSCT
T ss_pred CceEEEECcCHHHHHHHHHHHhc------CCCCCEEEEeCCCcCCc
Confidence 47999999999999999999998 7 99999999987764
No 214
>1jb0_C Photosystem I iron-sulfur center; membrane protein, multiprotein-pigment complex, photosynthes; HET: CL1 PQN BCR LHG LMG; 2.50A {Synechococcus elongatus} SCOP: d.58.1.2 PDB: 3pcq_C* 1k0t_A 2wsc_C* 2wse_C* 2wsf_C* 3lw5_C* 2o01_C*
Probab=98.20 E-value=2.2e-07 Score=75.13 Aligned_cols=70 Identities=23% Similarity=0.317 Sum_probs=54.0
Q ss_pred CcEEecCCCCccccCCCCCCCCcceeeCCeeEEEecCCC-CceeE--EEecCCcccCCCCcceeeeCCCCCceeeCCCCC
Q 006466 560 AHLRLRDPKIPELVNLPEYAGPESRYCPARVYEYVPDEK-NQLKL--QINAQNCLHCKDFQACDIKDPKQNIKWTVPEGG 636 (644)
Q Consensus 560 ~h~~~~~~~~~~~~~~~~~~~~~~~~cpa~~y~~~~~~~-~~~~~--~~~~~~c~~c~~~~~c~~~~p~~~i~w~~p~gg 636 (644)
+|+.+ |.+.|..|. .|+.+||.+++++.+.+. ....+ .++.+.|+.|| .|...||+++|+|+...|+
T Consensus 1 ~~~~~-~~~~C~~Cg------~C~~~CP~~a~~~~~~~~~~~~~~~~~~~~~~C~~Cg---~C~~~CP~~ai~~~~~~~~ 70 (80)
T 1jb0_C 1 AHTVK-IYDTCIGCT------QCVRACPTDVLEMVPWDGCKAGQIASSPRTEDCVGCK---RCETACPTDFLSIRVYLGA 70 (80)
T ss_dssp CCEEE-EETTCCCCC------HHHHHCTTCCCEEEECSSSTTSEEEECTTGGGCCCCC---HHHHHCCSSSCSEEEECCS
T ss_pred CCCcc-cCCcCcChh------HHHHHCCcccccccccccccccccccCCCCCcCcCcC---ChhhhCCCCccEeeeecch
Confidence 36666 567898886 799999999998765221 11122 35788999999 9999999999999999887
Q ss_pred CCC
Q 006466 637 GGP 639 (644)
Q Consensus 637 ~g~ 639 (644)
.-.
T Consensus 71 ~~~ 73 (80)
T 1jb0_C 71 ETT 73 (80)
T ss_dssp CCT
T ss_pred HHH
Confidence 643
No 215
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.19 E-value=7.5e-06 Score=89.33 Aligned_cols=104 Identities=18% Similarity=0.215 Sum_probs=78.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcE
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (644)
...|+|||||..|+.+|..|++. |.+|+|+|+.+.+... +
T Consensus 174 ~~~vvViGgG~~g~E~A~~l~~~------g~~Vtlv~~~~~~l~~------~---------------------------- 213 (468)
T 2qae_A 174 PKTMVVIGGGVIGLELGSVWARL------GAEVTVVEFAPRCAPT------L---------------------------- 213 (468)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSSTT------S----------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHh------CCEEEEEecCCccccc------C----------------------------
Confidence 35799999999999999999999 9999999998754320 0
Q ss_pred EEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHH-HhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccc
Q 006466 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKA-EELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKEN 265 (644)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a-~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~ 265 (644)
...+.+.|.+.+ ++.||+++++++|+++..++++ + .|.+.+ .+|+
T Consensus 214 ------------------------d~~~~~~l~~~l~~~~gv~i~~~~~v~~i~~~~~~-~-~v~~~~----~~g~---- 259 (468)
T 2qae_A 214 ------------------------DEDVTNALVGALAKNEKMKFMTSTKVVGGTNNGDS-V-SLEVEG----KNGK---- 259 (468)
T ss_dssp ------------------------CHHHHHHHHHHHHHHTCCEEECSCEEEEEEECSSS-E-EEEEEC----C-------
T ss_pred ------------------------CHHHHHHHHHHHhhcCCcEEEeCCEEEEEEEcCCe-E-EEEEEc----CCCc----
Confidence 023456677778 8899999999999999876543 3 355431 1221
Q ss_pred cccceEEEcCEEEEecCCCCcc
Q 006466 266 FQRGVELRGRITLLAEGCRGSL 287 (644)
Q Consensus 266 ~~~g~~i~a~~vV~A~G~~s~l 287 (644)
+.++.+|.||.|+|.++..
T Consensus 260 ---~~~i~~D~vv~a~G~~p~~ 278 (468)
T 2qae_A 260 ---RETVTCEALLVSVGRRPFT 278 (468)
T ss_dssp ---EEEEEESEEEECSCEEECC
T ss_pred ---eEEEECCEEEECCCcccCC
Confidence 2679999999999988753
No 216
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.19 E-value=7.7e-06 Score=89.94 Aligned_cols=103 Identities=15% Similarity=0.139 Sum_probs=79.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcE
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (644)
...|+|||||..|+.+|..|++... +|.+|+|+|+.+.+... ++
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~---~g~~Vtlv~~~~~~l~~------~d--------------------------- 234 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKP---PGGKVTLCYRNNLILRG------FD--------------------------- 234 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCC---TTCEEEEEESSSSSCTT------SC---------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCC---CCCeEEEEEcCCccccc------cC---------------------------
Confidence 3579999999999999999988621 28899999998754310 00
Q ss_pred EEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCccccc
Q 006466 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (644)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~ 266 (644)
..+.+.|.+.+++.||+++++++|+++..++++. ..|++.+
T Consensus 235 -------------------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~-~~v~~~~------------- 275 (495)
T 2wpf_A 235 -------------------------ETIREEVTKQLTANGIEIMTNENPAKVSLNTDGS-KHVTFES------------- 275 (495)
T ss_dssp -------------------------HHHHHHHHHHHHHTTCEEEESCCEEEEEECTTSC-EEEEETT-------------
T ss_pred -------------------------HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCce-EEEEECC-------------
Confidence 2345667778888999999999999998765443 3577665
Q ss_pred ccceEEEcCEEEEecCCCCc
Q 006466 267 QRGVELRGRITLLAEGCRGS 286 (644)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~ 286 (644)
|.++.+|.||.|+|.++.
T Consensus 276 --G~~i~~D~vv~a~G~~p~ 293 (495)
T 2wpf_A 276 --GKTLDVDVVMMAIGRIPR 293 (495)
T ss_dssp --SCEEEESEEEECSCEEEC
T ss_pred --CcEEEcCEEEECCCCccc
Confidence 568999999999997764
No 217
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.19 E-value=6.6e-06 Score=90.21 Aligned_cols=99 Identities=19% Similarity=0.244 Sum_probs=79.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcE
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (644)
..+|+|||+|+.|+..|..|++. |.+|+++++.+.+... +
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~------g~~Vtli~~~~~~l~~------~---------------------------- 230 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGL------GVKTTLLHRGDLILRN------F---------------------------- 230 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSSTT------S----------------------------
T ss_pred CCcEEEECcCHHHHHHHHHHHHc------CCeEEEEECCCccccc------c----------------------------
Confidence 45799999999999999999999 9999999998754210 0
Q ss_pred EEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCccccc
Q 006466 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (644)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~ 266 (644)
...+.+.|.+.+++.||+++++++|+++..+++ .+ .|.+.+
T Consensus 231 ------------------------~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~-~v-~v~~~~------------- 271 (484)
T 3o0h_A 231 ------------------------DYDLRQLLNDAMVAKGISIIYEATVSQVQSTEN-CY-NVVLTN------------- 271 (484)
T ss_dssp ------------------------CHHHHHHHHHHHHHHTCEEESSCCEEEEEECSS-SE-EEEETT-------------
T ss_pred ------------------------CHHHHHHHHHHHHHCCCEEEeCCEEEEEEeeCC-EE-EEEECC-------------
Confidence 023456678888889999999999999987764 34 677765
Q ss_pred ccceEEEcCEEEEecCCCCc
Q 006466 267 QRGVELRGRITLLAEGCRGS 286 (644)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~ 286 (644)
|.++.+|.||.|+|.++.
T Consensus 272 --g~~i~aD~Vi~A~G~~p~ 289 (484)
T 3o0h_A 272 --GQTICADRVMLATGRVPN 289 (484)
T ss_dssp --SCEEEESEEEECCCEEEC
T ss_pred --CcEEEcCEEEEeeCCCcC
Confidence 668999999999997764
No 218
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.18 E-value=7.1e-06 Score=89.40 Aligned_cols=99 Identities=21% Similarity=0.247 Sum_probs=79.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcE
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (644)
...|+|||+|+.|+..|..|++. |.+|+++++.+.+... +
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~------g~~Vt~v~~~~~~l~~------~---------------------------- 209 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGL------GVKTTLIYRGKEILSR------F---------------------------- 209 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSSTT------S----------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHc------CCeEEEEEcCCccccc------c----------------------------
Confidence 45799999999999999999999 9999999998754210 0
Q ss_pred EEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEE-eCcCccccCCCcccc
Q 006466 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIG-TNDMGIAKDGSKKEN 265 (644)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~-~~d~g~~~~G~~~~~ 265 (644)
-..+.+.|.+.+++.||+|++++.|+++..++++.+ .|. +.+
T Consensus 210 ------------------------~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~~------------ 252 (463)
T 4dna_A 210 ------------------------DQDMRRGLHAAMEEKGIRILCEDIIQSVSADADGRR-VATTMKH------------ 252 (463)
T ss_dssp ------------------------CHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSCE-EEEESSS------------
T ss_pred ------------------------CHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCCEE-EEEEcCC------------
Confidence 023466778888899999999999999988765543 577 665
Q ss_pred cccceEEEcCEEEEecCCCCc
Q 006466 266 FQRGVELRGRITLLAEGCRGS 286 (644)
Q Consensus 266 ~~~g~~i~a~~vV~A~G~~s~ 286 (644)
|. +.+|.||.|+|.++.
T Consensus 253 ---g~-i~aD~Vv~a~G~~p~ 269 (463)
T 4dna_A 253 ---GE-IVADQVMLALGRMPN 269 (463)
T ss_dssp ---CE-EEESEEEECSCEEES
T ss_pred ---Ce-EEeCEEEEeeCcccC
Confidence 66 999999999997653
No 219
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.18 E-value=6.9e-06 Score=90.19 Aligned_cols=103 Identities=17% Similarity=0.140 Sum_probs=79.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcE
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (644)
...|+|||||+.|+.+|..|++.. .+|.+|+|+|+.+.+... +
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~---~~g~~Vtlv~~~~~~l~~------~---------------------------- 229 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYK---ARGGQVDLAYRGDMILRG------F---------------------------- 229 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHS---CTTCEEEEEESSSSSSTT------S----------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhc---cCcCeEEEEEcCCCcccc------c----------------------------
Confidence 357999999999999999998862 128999999998754320 0
Q ss_pred EEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCccccc
Q 006466 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (644)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~ 266 (644)
...+.+.|.+.+++.||+|+++++|+++..++++.+ .|.+.+
T Consensus 230 ------------------------d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~-~v~~~~------------- 271 (490)
T 1fec_A 230 ------------------------DSELRKQLTEQLRANGINVRTHENPAKVTKNADGTR-HVVFES------------- 271 (490)
T ss_dssp ------------------------CHHHHHHHHHHHHHTTEEEEETCCEEEEEECTTSCE-EEEETT-------------
T ss_pred ------------------------CHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEE-EEEECC-------------
Confidence 023456678888889999999999999987654433 577665
Q ss_pred ccceEEEcCEEEEecCCCCc
Q 006466 267 QRGVELRGRITLLAEGCRGS 286 (644)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~ 286 (644)
|.++.+|.||.|+|.++.
T Consensus 272 --G~~i~~D~vv~a~G~~p~ 289 (490)
T 1fec_A 272 --GAEADYDVVMLAIGRVPR 289 (490)
T ss_dssp --SCEEEESEEEECSCEEES
T ss_pred --CcEEEcCEEEEccCCCcC
Confidence 568999999999997764
No 220
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.18 E-value=1e-05 Score=88.22 Aligned_cols=102 Identities=23% Similarity=0.308 Sum_probs=77.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcE
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (644)
...|+|||||..|+.+|..|++. |.+|+|+|+.+.+... ++
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~------g~~Vtlv~~~~~~l~~------~~--------------------------- 211 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNY------GVDVTIVEFLPRALPN------ED--------------------------- 211 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSSTT------SC---------------------------
T ss_pred CCeEEEECCcHHHHHHHHHHHHc------CCeEEEEEcCCccccc------cC---------------------------
Confidence 35799999999999999999999 9999999998754310 00
Q ss_pred EEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCccccc
Q 006466 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (644)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~ 266 (644)
..+.+.+.+.+++.||+++++++|+++..++++ + .|.+.+ +|+
T Consensus 212 -------------------------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~-~-~v~~~~-----~g~----- 254 (464)
T 2a8x_A 212 -------------------------ADVSKEIEKQFKKLGVTILTATKVESIADGGSQ-V-TVTVTK-----DGV----- 254 (464)
T ss_dssp -------------------------HHHHHHHHHHHHHHTCEEECSCEEEEEEECSSC-E-EEEEES-----SSC-----
T ss_pred -------------------------HHHHHHHHHHHHHcCCEEEeCcEEEEEEEcCCe-E-EEEEEc-----CCc-----
Confidence 234556777788899999999999999876533 3 355431 121
Q ss_pred ccceEEEcCEEEEecCCCCc
Q 006466 267 QRGVELRGRITLLAEGCRGS 286 (644)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~ 286 (644)
+.++.+|.||.|+|.++.
T Consensus 255 --~~~~~~D~vv~a~G~~p~ 272 (464)
T 2a8x_A 255 --AQELKAEKVLQAIGFAPN 272 (464)
T ss_dssp --EEEEEESEEEECSCEEEC
T ss_pred --eEEEEcCEEEECCCCCcc
Confidence 267999999999998765
No 221
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.17 E-value=1.4e-05 Score=87.15 Aligned_cols=112 Identities=23% Similarity=0.260 Sum_probs=84.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcE
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (644)
..+|+|||+|+.|+.+|..|++.. |.+|+++|+.+.+.... +
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~-----g~~Vtlv~~~~~~l~~~-----~---------------------------- 200 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMW-----GIDTTVVELADQIMPGF-----T---------------------------- 200 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHH-----CCEEEEECSSSSSSTTT-----S----------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHhc-----CCcEEEEEccCcccccc-----c----------------------------
Confidence 357999999999999999998852 78999999987542200 0
Q ss_pred EEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCccccc
Q 006466 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (644)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~ 266 (644)
...+.+.|.+.+++.||+++++++|+++..++ +.+. |.+.+
T Consensus 201 ------------------------~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~~v~-v~~~~------------- 241 (472)
T 3iwa_A 201 ------------------------SKSLSQMLRHDLEKNDVVVHTGEKVVRLEGEN-GKVA-RVITD------------- 241 (472)
T ss_dssp ------------------------CHHHHHHHHHHHHHTTCEEECSCCEEEEEESS-SBEE-EEEES-------------
T ss_pred ------------------------CHHHHHHHHHHHHhcCCEEEeCCEEEEEEccC-CeEE-EEEeC-------------
Confidence 02446678888889999999999999998754 4553 66654
Q ss_pred ccceEEEcCEEEEecCCCCcchHHHHHHcCCCc
Q 006466 267 QRGVELRGRITLLAEGCRGSLSEKLIKNFKLRE 299 (644)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~l~~~l~~~~~~~~ 299 (644)
|.++.+|.||.|+|.++... +.+..++..
T Consensus 242 --g~~i~aD~Vv~a~G~~p~~~--l~~~~gl~~ 270 (472)
T 3iwa_A 242 --KRTLDADLVILAAGVSPNTQ--LARDAGLEL 270 (472)
T ss_dssp --SCEEECSEEEECSCEEECCH--HHHHHTCCB
T ss_pred --CCEEEcCEEEECCCCCcCHH--HHHhCCccC
Confidence 66899999999999987532 555566653
No 222
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=98.16 E-value=6.4e-07 Score=97.49 Aligned_cols=44 Identities=27% Similarity=0.389 Sum_probs=35.4
Q ss_pred cccEEEECCCHHHHHHHHHHHh-hchhcCCCCeEEEEcCCCCCCC
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQ-LCREKNVDLSVCVVEKGAEVGA 150 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~-~~~~~~~G~~V~viEk~~~~g~ 150 (644)
.+||+||||||||+++|..|++ ...+...|.+|+|||+.+.+++
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg 47 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWG 47 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCST
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCC
Confidence 4799999999999999999998 5210111789999999987765
No 223
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.13 E-value=7.1e-06 Score=84.44 Aligned_cols=98 Identities=19% Similarity=0.195 Sum_probs=73.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcE
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (644)
...|+|||+|+.|+.+|..|++. |.+|+++++.+.+..
T Consensus 155 ~~~v~viG~G~~g~e~a~~l~~~------g~~V~~i~~~~~~~~------------------------------------ 192 (319)
T 3cty_A 155 GKRVVTIGGGNSGAIAAISMSEY------VKNVTIIEYMPKYMC------------------------------------ 192 (319)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTT------BSEEEEECSSSSCCS------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhh------CCcEEEEEcCCccCC------------------------------------
Confidence 35799999999999999999998 999999998764321
Q ss_pred EEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCccccc
Q 006466 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (644)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~ 266 (644)
...+.+.+++.||+++++++++++..++ +.+.+|.+.+. .+|+
T Consensus 193 ----------------------------~~~l~~~l~~~gv~i~~~~~v~~i~~~~-~~v~~v~~~~~---~~g~----- 235 (319)
T 3cty_A 193 ----------------------------ENAYVQEIKKRNIPYIMNAQVTEIVGDG-KKVTGVKYKDR---TTGE----- 235 (319)
T ss_dssp ----------------------------CHHHHHHHHHTTCCEECSEEEEEEEESS-SSEEEEEEEET---TTCC-----
T ss_pred ----------------------------CHHHHHHHhcCCcEEEcCCeEEEEecCC-ceEEEEEEEEc---CCCc-----
Confidence 0113445557899999999999998764 55667776520 1232
Q ss_pred ccceEEEcCEEEEecCCCC
Q 006466 267 QRGVELRGRITLLAEGCRG 285 (644)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s 285 (644)
..++.+|.||.|+|..+
T Consensus 236 --~~~i~~D~vi~a~G~~p 252 (319)
T 3cty_A 236 --EKLIETDGVFIYVGLIP 252 (319)
T ss_dssp --EEEECCSEEEECCCEEE
T ss_pred --eEEEecCEEEEeeCCcc
Confidence 14799999999999665
No 224
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.13 E-value=6.1e-06 Score=90.07 Aligned_cols=104 Identities=17% Similarity=0.235 Sum_probs=78.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcE
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (644)
...|+|||||+.|+.+|..|++. |.+|+|+|+.+.+... +
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~------g~~Vtli~~~~~~l~~------~---------------------------- 216 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRI------GSEVTVVEFASEIVPT------M---------------------------- 216 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHH------TCEEEEECSSSSSSTT------S----------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHc------CCcEEEEEcCCccccc------c----------------------------
Confidence 35799999999999999999999 9999999998754320 0
Q ss_pred EEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCccccc
Q 006466 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (644)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~ 266 (644)
...+.+.|.+.+++.||+++++++|+++..++++ + .|.+.+ ..+|+
T Consensus 217 ------------------------~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~-~-~v~~~~---~~~g~----- 262 (470)
T 1dxl_A 217 ------------------------DAEIRKQFQRSLEKQGMKFKLKTKVVGVDTSGDG-V-KLTVEP---SAGGE----- 262 (470)
T ss_dssp ------------------------CHHHHHHHHHHHHHSSCCEECSEEEEEEECSSSS-E-EEEEEE---SSSCC-----
T ss_pred ------------------------cHHHHHHHHHHHHHcCCEEEeCCEEEEEEEcCCe-E-EEEEEe---cCCCc-----
Confidence 0234566778888899999999999999766533 3 355431 01222
Q ss_pred ccceEEEcCEEEEecCCCCc
Q 006466 267 QRGVELRGRITLLAEGCRGS 286 (644)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~ 286 (644)
+.++.+|.||.|+|.++.
T Consensus 263 --~~~~~~D~vv~a~G~~p~ 280 (470)
T 1dxl_A 263 --QTIIEADVVLVSAGRTPF 280 (470)
T ss_dssp --CEEEEESEEECCCCEEEC
T ss_pred --ceEEECCEEEECCCCCcC
Confidence 367999999999998764
No 225
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.12 E-value=1.5e-05 Score=86.82 Aligned_cols=98 Identities=17% Similarity=0.163 Sum_probs=77.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcE
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (644)
...|+|||||+.|+.+|..|++. |.+|+++|+.+.+.. ++
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~------g~~Vtlv~~~~~~l~-------~~--------------------------- 215 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARL------GSKVTVLARNTLFFR-------ED--------------------------- 215 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCTTTT-------SC---------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHc------CCEEEEEEECCccCC-------CC---------------------------
Confidence 35799999999999999999999 999999999864321 00
Q ss_pred EEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCccccc
Q 006466 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (644)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~ 266 (644)
..+.+.|.+.+++.||+++++++|+++..++ + .+.|.+.+
T Consensus 216 -------------------------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~-~-~~~v~~~~------------- 255 (467)
T 1zk7_A 216 -------------------------PAIGEAVTAAFRAEGIEVLEHTQASQVAHMD-G-EFVLTTTH------------- 255 (467)
T ss_dssp -------------------------HHHHHHHHHHHHHTTCEEETTCCEEEEEEET-T-EEEEEETT-------------
T ss_pred -------------------------HHHHHHHHHHHHhCCCEEEcCCEEEEEEEeC-C-EEEEEECC-------------
Confidence 2346667888888999999999999998654 3 34566543
Q ss_pred ccceEEEcCEEEEecCCCCcc
Q 006466 267 QRGVELRGRITLLAEGCRGSL 287 (644)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~l 287 (644)
.++.+|.||.|+|.++..
T Consensus 256 ---~~i~aD~Vv~a~G~~p~~ 273 (467)
T 1zk7_A 256 ---GELRADKLLVATGRTPNT 273 (467)
T ss_dssp ---EEEEESEEEECSCEEESC
T ss_pred ---cEEEcCEEEECCCCCcCC
Confidence 579999999999988753
No 226
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.12 E-value=1.5e-05 Score=81.40 Aligned_cols=98 Identities=24% Similarity=0.279 Sum_probs=73.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcE
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (644)
...|+|||+|+.|+.+|..|++. |.+|+++++.+.+..
T Consensus 144 ~~~v~VvG~G~~g~e~A~~l~~~------g~~Vtlv~~~~~~~~------------------------------------ 181 (310)
T 1fl2_A 144 GKRVAVIGGGNSGVEAAIDLAGI------VEHVTLLEFAPEMKA------------------------------------ 181 (310)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT------BSEEEEECSSSSCCS------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHh------CCEEEEEEeCcccCc------------------------------------
Confidence 35799999999999999999998 999999998875421
Q ss_pred EEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHh-cCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccc
Q 006466 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEE-LGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKEN 265 (644)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~-~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~ 265 (644)
...+.+.+++ .||+++++++++++..++ +.+.+|++.+. .+|+
T Consensus 182 ----------------------------~~~~~~~l~~~~gv~v~~~~~v~~i~~~~-~~v~~v~~~~~---~~g~---- 225 (310)
T 1fl2_A 182 ----------------------------DQVLQDKLRSLKNVDIILNAQTTEVKGDG-SKVVGLEYRDR---VSGD---- 225 (310)
T ss_dssp ----------------------------CHHHHHHHHTCTTEEEESSEEEEEEEESS-SSEEEEEEEET---TTCC----
T ss_pred ----------------------------cHHHHHHHhhCCCeEEecCCceEEEEcCC-CcEEEEEEEEC---CCCc----
Confidence 0123444555 699999999999998654 56767777541 1222
Q ss_pred cccceEEEcCEEEEecCCCC
Q 006466 266 FQRGVELRGRITLLAEGCRG 285 (644)
Q Consensus 266 ~~~g~~i~a~~vV~A~G~~s 285 (644)
..++.+|.||.|+|..+
T Consensus 226 ---~~~i~~D~vi~a~G~~p 242 (310)
T 1fl2_A 226 ---IHNIELAGIFVQIGLLP 242 (310)
T ss_dssp ---EEEEECSEEEECSCEEE
T ss_pred ---EEEEEcCEEEEeeCCcc
Confidence 25789999999999554
No 227
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.12 E-value=1.3e-05 Score=90.15 Aligned_cols=108 Identities=16% Similarity=0.205 Sum_probs=83.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcE
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (644)
..+|+|||||..|+.+|..|++. |.+|+++|+.+.+... +
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~------g~~Vtlv~~~~~~l~~------~---------------------------- 226 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRER------GIEVTLVEMANQVMPP------I---------------------------- 226 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSCTT------S----------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhC------CCeEEEEecCCccccc------C----------------------------
Confidence 35799999999999999999999 9999999998754320 0
Q ss_pred EEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCccccc
Q 006466 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (644)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~ 266 (644)
...+.+.|.+.+++.||+++++++|+++..++ + +|.+.+
T Consensus 227 ------------------------~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~---~v~~~~------------- 265 (588)
T 3ics_A 227 ------------------------DYEMAAYVHEHMKNHDVELVFEDGVDALEENG-A---VVRLKS------------- 265 (588)
T ss_dssp ------------------------CHHHHHHHHHHHHHTTCEEECSCCEEEEEGGG-T---EEEETT-------------
T ss_pred ------------------------CHHHHHHHHHHHHHcCCEEEECCeEEEEecCC-C---EEEECC-------------
Confidence 02345667788888999999999999997654 2 366655
Q ss_pred ccceEEEcCEEEEecCCCCcchHHHHHHcCCCc
Q 006466 267 QRGVELRGRITLLAEGCRGSLSEKLIKNFKLRE 299 (644)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~l~~~l~~~~~~~~ 299 (644)
|.++.+|.||.|+|.++.. .+.+..++..
T Consensus 266 --g~~i~~D~Vi~a~G~~p~~--~~l~~~g~~~ 294 (588)
T 3ics_A 266 --GSVIQTDMLILAIGVQPES--SLAKGAGLAL 294 (588)
T ss_dssp --SCEEECSEEEECSCEEECC--HHHHHTTCCB
T ss_pred --CCEEEcCEEEEccCCCCCh--HHHHhcCceE
Confidence 6789999999999988753 3456666653
No 228
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=98.12 E-value=3.5e-06 Score=93.36 Aligned_cols=37 Identities=43% Similarity=0.559 Sum_probs=32.6
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCC
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~ 147 (644)
.+||+||||||+||+.+|.+|++. ++++|+|||+++.
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~-----~~~~VLvLEaG~~ 52 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSED-----PDSRVLLIEAGEE 52 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTS-----TTSCEEEECSSBC
T ss_pred CCeeEEEECccHHHHHHHHHHHhC-----CCCeEEEEcCCCC
Confidence 379999999999999999999983 2899999999864
No 229
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.12 E-value=1.2e-05 Score=83.22 Aligned_cols=101 Identities=19% Similarity=0.202 Sum_probs=76.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcE
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (644)
...|+|||+|..|+.+|..|++. |.+|+++++.+.+...
T Consensus 152 ~~~v~viG~G~~g~e~a~~l~~~------g~~V~~v~~~~~~~~~----------------------------------- 190 (335)
T 2zbw_A 152 GKRVLIVGGGDSAVDWALNLLDT------ARRITLIHRRPQFRAH----------------------------------- 190 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTT------SSEEEEECSSSSCCSC-----------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhh------CCEEEEEEcCCccCcc-----------------------------------
Confidence 35799999999999999999998 9999999998754210
Q ss_pred EEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCccccc
Q 006466 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (644)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~ 266 (644)
..+.+.|.+.+++.||++++++.++++..+ +.+.+|.+.+. .+|+
T Consensus 191 -------------------------~~~~~~l~~~l~~~gv~v~~~~~v~~i~~~--~~~~~v~~~~~---~~g~----- 235 (335)
T 2zbw_A 191 -------------------------EASVKELMKAHEEGRLEVLTPYELRRVEGD--ERVRWAVVFHN---QTQE----- 235 (335)
T ss_dssp -------------------------HHHHHHHHHHHHTTSSEEETTEEEEEEEES--SSEEEEEEEET---TTCC-----
T ss_pred -------------------------HHHHHHHHhccccCCeEEecCCcceeEccC--CCeeEEEEEEC---CCCc-----
Confidence 112345666777889999999999999873 44556766520 1222
Q ss_pred ccceEEEcCEEEEecCCCC
Q 006466 267 QRGVELRGRITLLAEGCRG 285 (644)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s 285 (644)
..++.+|.||.|+|..+
T Consensus 236 --~~~i~~D~vi~a~G~~p 252 (335)
T 2zbw_A 236 --ELALEVDAVLILAGYIT 252 (335)
T ss_dssp --EEEEECSEEEECCCEEE
T ss_pred --eEEEecCEEEEeecCCC
Confidence 26799999999999665
No 230
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.11 E-value=4.5e-06 Score=90.29 Aligned_cols=104 Identities=14% Similarity=0.167 Sum_probs=78.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcEE
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKFW 187 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 187 (644)
..|+|||||+.|+.+|..+++. |.+|+|+|+.+.+... ++
T Consensus 148 ~~vvViGgG~ig~E~A~~l~~~------g~~Vtlv~~~~~ll~~------~d---------------------------- 187 (437)
T 4eqs_A 148 DKVLVVGAGYVSLEVLENLYER------GLHPTLIHRSDKINKL------MD---------------------------- 187 (437)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCEEEEEESSSCCSTT------SC----------------------------
T ss_pred cEEEEECCccchhhhHHHHHhc------CCcceeeeeecccccc------cc----------------------------
Confidence 4799999999999999999999 9999999998765321 00
Q ss_pred EeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccccc
Q 006466 188 FLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQ 267 (644)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~~ 267 (644)
..+.+.+.+.+++.||+++++++|+++.. . .|.+.+
T Consensus 188 ------------------------~~~~~~~~~~l~~~gV~i~~~~~v~~~~~---~---~v~~~~-------------- 223 (437)
T 4eqs_A 188 ------------------------ADMNQPILDELDKREIPYRLNEEINAING---N---EITFKS-------------- 223 (437)
T ss_dssp ------------------------GGGGHHHHHHHHHTTCCEEESCCEEEEET---T---EEEETT--------------
T ss_pred ------------------------chhHHHHHHHhhccceEEEeccEEEEecC---C---eeeecC--------------
Confidence 01244567777889999999999988742 1 255555
Q ss_pred cceEEEcCEEEEecCCCCcchHHHHHHcCCC
Q 006466 268 RGVELRGRITLLAEGCRGSLSEKLIKNFKLR 298 (644)
Q Consensus 268 ~g~~i~a~~vV~A~G~~s~l~~~l~~~~~~~ 298 (644)
|.++.+|.||.|.|..+.. .+.+..++.
T Consensus 224 -g~~~~~D~vl~a~G~~Pn~--~~~~~~gl~ 251 (437)
T 4eqs_A 224 -GKVEHYDMIIEGVGTHPNS--KFIESSNIK 251 (437)
T ss_dssp -SCEEECSEEEECCCEEESC--GGGTTSSCC
T ss_pred -CeEEeeeeEEEEeceecCc--HHHHhhhhh
Confidence 6789999999999987743 244444554
No 231
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.11 E-value=1.5e-05 Score=88.31 Aligned_cols=100 Identities=22% Similarity=0.191 Sum_probs=79.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcE
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (644)
.-.++|||||+.|+..|..+++. |.+|+|+++...+.. +
T Consensus 223 P~~lvIIGgG~IGlE~A~~~~~l------G~~VTii~~~~~L~~-------~---------------------------- 261 (542)
T 4b1b_A 223 PGKTLVVGASYVALECSGFLNSL------GYDVTVAVRSIVLRG-------F---------------------------- 261 (542)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHH------TCCEEEEESSCSSTT-------S----------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHhc------CCeEEEecccccccc-------c----------------------------
Confidence 45799999999999999999999 999999987543221 0
Q ss_pred EEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCccccc
Q 006466 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (644)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~ 266 (644)
-.++.+.+.+.+++.|++++.+..++++...++ .+ .|.+.+
T Consensus 262 ------------------------D~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~~-~~-~v~~~~------------- 302 (542)
T 4b1b_A 262 ------------------------DQQCAVKVKLYMEEQGVMFKNGILPKKLTKMDD-KI-LVEFSD------------- 302 (542)
T ss_dssp ------------------------CHHHHHHHHHHHHHTTCEEEETCCEEEEEEETT-EE-EEEETT-------------
T ss_pred ------------------------chhHHHHHHHHHHhhcceeecceEEEEEEecCC-eE-EEEEcC-------------
Confidence 024466678888899999999999999988763 33 466655
Q ss_pred ccceEEEcCEEEEecCCCCcch
Q 006466 267 QRGVELRGRITLLAEGCRGSLS 288 (644)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~l~ 288 (644)
+.++.+|.|+.|.|.++.+.
T Consensus 303 --~~~~~~D~vLvAvGR~Pnt~ 322 (542)
T 4b1b_A 303 --KTSELYDTVLYAIGRKGDID 322 (542)
T ss_dssp --SCEEEESEEEECSCEEESCG
T ss_pred --CCeEEEEEEEEcccccCCcc
Confidence 56788999999999887643
No 232
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.11 E-value=1.3e-05 Score=82.74 Aligned_cols=98 Identities=17% Similarity=0.162 Sum_probs=74.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcE
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (644)
...|+|||+|+.|+.+|..|++. |.+|+++++.+.+..
T Consensus 173 ~~~v~vvG~G~~g~e~a~~l~~~------g~~v~~v~~~~~~~~------------------------------------ 210 (338)
T 3itj_A 173 NKPLAVIGGGDSACEEAQFLTKY------GSKVFMLVRKDHLRA------------------------------------ 210 (338)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTT------SSEEEEECSSSSCCS------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhc------CCEEEEEEcCCccCC------------------------------------
Confidence 35799999999999999999999 999999998875421
Q ss_pred EEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhc-CCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccc
Q 006466 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEEL-GVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKEN 265 (644)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~-Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~ 265 (644)
...+.+.+.+. ||++++++.++++..++ +.+.+|++.+. .+|+
T Consensus 211 ----------------------------~~~~~~~l~~~~gv~i~~~~~v~~i~~~~-~~~~~v~~~~~---~~g~---- 254 (338)
T 3itj_A 211 ----------------------------STIMQKRAEKNEKIEILYNTVALEAKGDG-KLLNALRIKNT---KKNE---- 254 (338)
T ss_dssp ----------------------------CHHHHHHHHHCTTEEEECSEEEEEEEESS-SSEEEEEEEET---TTTE----
T ss_pred ----------------------------CHHHHHHHHhcCCeEEeecceeEEEEccc-CcEEEEEEEEC---CCCc----
Confidence 11234444444 99999999999998766 45667777541 1222
Q ss_pred cccceEEEcCEEEEecCCCC
Q 006466 266 FQRGVELRGRITLLAEGCRG 285 (644)
Q Consensus 266 ~~~g~~i~a~~vV~A~G~~s 285 (644)
+.++.+|.||.|+|..+
T Consensus 255 ---~~~i~~D~vi~a~G~~p 271 (338)
T 3itj_A 255 ---ETDLPVSGLFYAIGHTP 271 (338)
T ss_dssp ---EEEEECSEEEECSCEEE
T ss_pred ---eEEEEeCEEEEEeCCCC
Confidence 46799999999999654
No 233
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.11 E-value=2e-05 Score=86.45 Aligned_cols=105 Identities=20% Similarity=0.278 Sum_probs=79.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcE
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (644)
...|+|||||+.|+.+|..|++. |.+|+++|+.+.+... +
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~------g~~Vtlv~~~~~~l~~------~---------------------------- 237 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARL------GAKVTVVEFLDTILGG------M---------------------------- 237 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHH------TCEEEEECSSSSSSSS------S----------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHc------CCEEEEEecccccccc------C----------------------------
Confidence 35799999999999999999999 9999999998764320 0
Q ss_pred EEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCccccc
Q 006466 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (644)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~ 266 (644)
...+.+.+.+.+++.||+++++++|+++..++++ + .|.+.+. .+|+
T Consensus 238 ------------------------d~~~~~~l~~~l~~~gV~v~~~~~v~~i~~~~~~-~-~v~~~~~---~~g~----- 283 (491)
T 3urh_A 238 ------------------------DGEVAKQLQRMLTKQGIDFKLGAKVTGAVKSGDG-A-KVTFEPV---KGGE----- 283 (491)
T ss_dssp ------------------------CHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTE-E-EEEEEET---TSCC-----
T ss_pred ------------------------CHHHHHHHHHHHHhCCCEEEECCeEEEEEEeCCE-E-EEEEEec---CCCc-----
Confidence 0234566777888899999999999999876643 3 3555430 1122
Q ss_pred ccceEEEcCEEEEecCCCCcc
Q 006466 267 QRGVELRGRITLLAEGCRGSL 287 (644)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~l 287 (644)
..++.+|.||.|+|.++..
T Consensus 284 --~~~i~~D~Vi~a~G~~p~~ 302 (491)
T 3urh_A 284 --ATTLDAEVVLIATGRKPST 302 (491)
T ss_dssp --CEEEEESEEEECCCCEECC
T ss_pred --eEEEEcCEEEEeeCCccCC
Confidence 2679999999999987653
No 234
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=98.11 E-value=1.7e-06 Score=99.79 Aligned_cols=40 Identities=35% Similarity=0.547 Sum_probs=36.8
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCc
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAH 151 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~ 151 (644)
..+||+||||||||+++|+.|++. |++|+|||+.+.+|+.
T Consensus 388 ~~~~VvIIGgGpAGl~aA~~L~~~------G~~Vtlie~~~~~GG~ 427 (729)
T 1o94_A 388 NKDSVLIVGAGPSGSEAARVLMES------GYTVHLTDTAEKIGGH 427 (729)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSTTTT
T ss_pred CCceEEEECCCHHHHHHHHHHHHC------CCeEEEEeCCCCcCCe
Confidence 458999999999999999999999 9999999999888764
No 235
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.10 E-value=1.6e-05 Score=86.94 Aligned_cols=108 Identities=19% Similarity=0.049 Sum_probs=80.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcE
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (644)
...|+|||||..|+.+|..|++. |.+|+++++.+.+... +
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~------g~~Vtlv~~~~~~l~~------~---------------------------- 226 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSAL------GSKTSLMIRHDKVLRS------F---------------------------- 226 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSCTT------S----------------------------
T ss_pred CccEEEECCCHHHHHHHHHHHHc------CCeEEEEEeCCccccc------c----------------------------
Confidence 35799999999999999999999 9999999998754320 0
Q ss_pred EEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCccccc
Q 006466 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (644)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~ 266 (644)
-..+.+.+.+.+++.||++++++.++++..++++..+.|.+.+. .+|+.
T Consensus 227 ------------------------d~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~---~~g~~---- 275 (478)
T 3dk9_A 227 ------------------------DSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVP---GRLPV---- 275 (478)
T ss_dssp ------------------------CHHHHHHHHHHHHHTTCEEETTEEEEEEEECSSSEEEEEEECCT---TSCCE----
T ss_pred ------------------------CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEccC---CCCcc----
Confidence 02345667778888999999999999998876663335666541 11110
Q ss_pred ccceEEEcCEEEEecCCCCc
Q 006466 267 QRGVELRGRITLLAEGCRGS 286 (644)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~ 286 (644)
+|.++.+|.||.|+|..+.
T Consensus 276 -~g~~~~~D~vi~a~G~~p~ 294 (478)
T 3dk9_A 276 -MTMIPDVDCLLWAIGRVPN 294 (478)
T ss_dssp -EEEEEEESEEEECSCEEES
T ss_pred -cceEEEcCEEEEeeccccC
Confidence 1367999999999996653
No 236
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.09 E-value=1.9e-05 Score=86.72 Aligned_cols=102 Identities=20% Similarity=0.182 Sum_probs=76.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcE
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (644)
...|+|||||+.|+.+|..|++. |.+|+++|+.+.+... +
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~------g~~Vtlv~~~~~~l~~------~---------------------------- 213 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRL------GVIVKVFGRSGSVANL------Q---------------------------- 213 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHT------TCEEEEECCTTCCTTC------C----------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHc------CCeEEEEEECCccccc------C----------------------------
Confidence 45799999999999999999999 9999999998865320 0
Q ss_pred EEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCccccc
Q 006466 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (644)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~ 266 (644)
-..+.+.+.+.+++. |+++++++|+++..++++ + .|.+.+ .+|+
T Consensus 214 ------------------------d~~~~~~l~~~l~~~-V~i~~~~~v~~i~~~~~~-v-~v~~~~----~~G~----- 257 (492)
T 3ic9_A 214 ------------------------DEEMKRYAEKTFNEE-FYFDAKARVISTIEKEDA-V-EVIYFD----KSGQ----- 257 (492)
T ss_dssp ------------------------CHHHHHHHHHHHHTT-SEEETTCEEEEEEECSSS-E-EEEEEC----TTCC-----
T ss_pred ------------------------CHHHHHHHHHHHhhC-cEEEECCEEEEEEEcCCE-E-EEEEEe----CCCc-----
Confidence 023455666777777 999999999999877643 4 255432 1222
Q ss_pred ccceEEEcCEEEEecCCCCc
Q 006466 267 QRGVELRGRITLLAEGCRGS 286 (644)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~ 286 (644)
..++.+|.||.|+|..+.
T Consensus 258 --~~~i~~D~Vi~a~G~~p~ 275 (492)
T 3ic9_A 258 --KTTESFQYVLAATGRKAN 275 (492)
T ss_dssp --EEEEEESEEEECSCCEES
T ss_pred --eEEEECCEEEEeeCCccC
Confidence 167999999999998764
No 237
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=98.09 E-value=3.2e-06 Score=94.10 Aligned_cols=63 Identities=24% Similarity=0.393 Sum_probs=44.5
Q ss_pred HhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccccccceEEEcC-EEEEecCCCCcchHHHHHHcCC
Q 006466 223 EELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGR-ITLLAEGCRGSLSEKLIKNFKL 297 (644)
Q Consensus 223 ~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~~~g~~i~a~-~vV~A~G~~s~l~~~l~~~~~~ 297 (644)
.+.|++|+.++.|++|+.+++++++||.+.+. .+|+ ..+++|+ .||+|+|+.. ..+|....|+
T Consensus 220 ~~~~~~i~~~~~V~~i~~~~~~~~~GV~~~~~---~~g~-------~~~i~A~k~VIlaaG~~~--sp~lL~~SGi 283 (546)
T 2jbv_A 220 EQENFTLLTGLRARQLVFDADRRCTGVDIVDS---AFGH-------THRLTARNEVVLSTGAID--TPKLLMLSGI 283 (546)
T ss_dssp TCTTEEEECSCEEEEEEECTTSBEEEEEEESS---TTSC-------EEEEEEEEEEEECSHHHH--HHHHHHHTTE
T ss_pred cCCCcEEEeCCEEEEEEECCCCeEEEEEEEEC---CCCc-------EEEEEeCccEEEecCccC--CchhhhhcCC
Confidence 35689999999999999876578889987541 1132 2578998 9999999853 2344444443
No 238
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.08 E-value=9.6e-06 Score=85.00 Aligned_cols=102 Identities=21% Similarity=0.270 Sum_probs=76.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcE
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (644)
...|+|||+|+.|+.+|..|++. |.+|+++++.+.+...
T Consensus 163 ~~~vvVvG~G~~g~e~A~~l~~~------g~~V~lv~~~~~~~~~----------------------------------- 201 (360)
T 3ab1_A 163 GKRVVIVGGGDSALDWTVGLIKN------AASVTLVHRGHEFQGH----------------------------------- 201 (360)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTT------SSEEEEECSSSSCSSC-----------------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHhc------CCEEEEEEcCCCCCCC-----------------------------------
Confidence 35799999999999999999998 9999999998754220
Q ss_pred EEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCccccc
Q 006466 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (644)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~ 266 (644)
..+.+.|.+..++.||+++++++++++..++ +.+.+|.+.. .+|+
T Consensus 202 -------------------------~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~-~~v~~v~~~~----~~g~----- 246 (360)
T 3ab1_A 202 -------------------------GKTAHEVERARANGTIDVYLETEVASIEESN-GVLTRVHLRS----SDGS----- 246 (360)
T ss_dssp -------------------------SHHHHSSHHHHHHTSEEEESSEEEEEEEEET-TEEEEEEEEE----TTCC-----
T ss_pred -------------------------HHHHHHHHHHhhcCceEEEcCcCHHHhccCC-CceEEEEEEe----cCCC-----
Confidence 0112335556677899999999999998764 5566676641 1222
Q ss_pred ccceEEEcCEEEEecCCCCc
Q 006466 267 QRGVELRGRITLLAEGCRGS 286 (644)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~ 286 (644)
..++.+|.||.|+|..+.
T Consensus 247 --~~~i~~D~vi~a~G~~p~ 264 (360)
T 3ab1_A 247 --KWTVEADRLLILIGFKSN 264 (360)
T ss_dssp --EEEEECSEEEECCCBCCS
T ss_pred --eEEEeCCEEEECCCCCCC
Confidence 157999999999996653
No 239
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.08 E-value=2e-05 Score=86.15 Aligned_cols=101 Identities=19% Similarity=0.153 Sum_probs=77.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcE
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (644)
...|+|||+|+.|+.+|..|++. |.+|+++++.+.+... +
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~~~------g~~Vtlv~~~~~~l~~------~---------------------------- 219 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWARL------GAEVTVLEAMDKFLPA------V---------------------------- 219 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSSSSSTT------S----------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHc------CCcEEEEecCCCcCcc------c----------------------------
Confidence 35799999999999999999999 9999999998754320 0
Q ss_pred EEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCccccc
Q 006466 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (644)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~ 266 (644)
...+.+.+.+.+++.||+++++++|+++..++++ + .|.+.+ .+
T Consensus 220 ------------------------~~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~~~-~-~v~~~~----~~------- 262 (476)
T 3lad_A 220 ------------------------DEQVAKEAQKILTKQGLKILLGARVTGTEVKNKQ-V-TVKFVD----AE------- 262 (476)
T ss_dssp ------------------------CHHHHHHHHHHHHHTTEEEEETCEEEEEEECSSC-E-EEEEES----SS-------
T ss_pred ------------------------CHHHHHHHHHHHHhCCCEEEECCEEEEEEEcCCE-E-EEEEEe----CC-------
Confidence 0234666777888899999999999999876643 3 355543 01
Q ss_pred ccc-eEEEcCEEEEecCCCCc
Q 006466 267 QRG-VELRGRITLLAEGCRGS 286 (644)
Q Consensus 267 ~~g-~~i~a~~vV~A~G~~s~ 286 (644)
| .++.+|.||.|+|..+.
T Consensus 263 --g~~~~~~D~vi~a~G~~p~ 281 (476)
T 3lad_A 263 --GEKSQAFDKLIVAVGRRPV 281 (476)
T ss_dssp --EEEEEEESEEEECSCEEEC
T ss_pred --CcEEEECCEEEEeeCCccc
Confidence 2 57999999999997664
No 240
>7fd1_A FD1, protein (7-Fe ferredoxin I); electron transport, iron-sulfur; 1.30A {Azotobacter vinelandii} SCOP: d.58.1.2 PDB: 1fda_A 1fdb_A 1fer_A 1axq_A 5fd1_A 6fdr_A 6fd1_A 7fdr_A 1frh_A 1fri_A 1fdd_A 1frl_A 1d3w_A 1frm_A 1frx_A 1g6b_A 1pc4_A 1frj_A 2fd2_A 1fd2_A ...
Probab=98.07 E-value=8.9e-07 Score=75.89 Aligned_cols=55 Identities=20% Similarity=0.298 Sum_probs=46.8
Q ss_pred CCCCccccCCCCCCCCcceeeCCeeEEEecCCCCceeEEEecCCcccCCCCcceeeeCCCCCceeeC
Q 006466 566 DPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQINAQNCLHCKDFQACDIKDPKQNIKWTV 632 (644)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~cpa~~y~~~~~~~~~~~~~~~~~~c~~c~~~~~c~~~~p~~~i~w~~ 632 (644)
|++.|+.|. ...|..+||.+++.+.++ .+.||.+.|+.|| .|...||+++|++..
T Consensus 4 ~~~~C~~C~----~~~C~~~CP~~ai~~~~~-----~~~i~~~~C~~Cg---~C~~~CP~~ai~~~~ 58 (106)
T 7fd1_A 4 VTDNCIKCK----YTDCVEVCPVDCFYEGPN-----FLVIHPDECIDCA---LCEPECPAQAIFSED 58 (106)
T ss_dssp ECGGGTTTC----CCHHHHHCTTCCEEECSS-----CEEECTTTCCCCC---TTGGGCTTCCEEEGG
T ss_pred CccccCCcc----CcHHHHHcCccceEcCCC-----cEEECcccCCChh---hhHHhCCChhhhccc
Confidence 567788875 347999999999987654 6889999999999 999999999998764
No 241
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.07 E-value=1.2e-05 Score=88.17 Aligned_cols=103 Identities=17% Similarity=0.093 Sum_probs=78.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcE
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (644)
..+|+|||||..|+.+|..|++. |.+|+|+|+.+.+... +
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~------G~~Vtlv~~~~~~l~~------~---------------------------- 224 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTL------GSRLDVVEMMDGLMQG------A---------------------------- 224 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHH------TCEEEEECSSSSSSTT------S----------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHc------CCeEEEEEECCccccc------c----------------------------
Confidence 35799999999999999999999 9999999998764320 0
Q ss_pred EEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCccccc
Q 006466 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (644)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~ 266 (644)
-..+.+.+.+.+++.||+++++++|+++..++++ ..|++.+. ++
T Consensus 225 ------------------------~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~--~~v~~~~~----~~------ 268 (482)
T 1ojt_A 225 ------------------------DRDLVKVWQKQNEYRFDNIMVNTKTVAVEPKEDG--VYVTFEGA----NA------ 268 (482)
T ss_dssp ------------------------CHHHHHHHHHHHGGGEEEEECSCEEEEEEEETTE--EEEEEESS----SC------
T ss_pred ------------------------CHHHHHHHHHHHHhcCCEEEECCEEEEEEEcCCe--EEEEEecc----CC------
Confidence 0234566777888899999999999999876532 34555420 11
Q ss_pred ccceEEEcCEEEEecCCCCc
Q 006466 267 QRGVELRGRITLLAEGCRGS 286 (644)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~ 286 (644)
.|.++.+|.||.|+|.++.
T Consensus 269 -~g~~~~~D~vv~a~G~~p~ 287 (482)
T 1ojt_A 269 -PKEPQRYDAVLVAAGRAPN 287 (482)
T ss_dssp -CSSCEEESCEEECCCEEEC
T ss_pred -CceEEEcCEEEECcCCCcC
Confidence 1356889999999998875
No 242
>1xer_A Ferredoxin; electron transport, iron-sulfur, duplication; 2.00A {Sulfolobus tokodaii str} SCOP: d.58.1.3 PDB: 2vkr_A
Probab=98.07 E-value=6.9e-07 Score=76.04 Aligned_cols=64 Identities=20% Similarity=0.343 Sum_probs=51.1
Q ss_pred CcEEecCCCCccccCCCCCCCCcceeeCCeeEEEecCCC----CceeEEEecCCcccCCCCcceeeeCCCCCceeeCC
Q 006466 560 AHLRLRDPKIPELVNLPEYAGPESRYCPARVYEYVPDEK----NQLKLQINAQNCLHCKDFQACDIKDPKQNIKWTVP 633 (644)
Q Consensus 560 ~h~~~~~~~~~~~~~~~~~~~~~~~~cpa~~y~~~~~~~----~~~~~~~~~~~c~~c~~~~~c~~~~p~~~i~w~~p 633 (644)
.++.+ |.+.|+.|. .|+.+||.+++.+.++.. ....+.++.+.|+.|| .|...||+++|+|..|
T Consensus 36 ~~~~i-d~~~C~~Cg------~C~~~CP~~ai~~~~~~~~~~~~~~~~~~~~~~C~~Cg---~C~~~CP~~Ai~~~~~ 103 (103)
T 1xer_A 36 TIVGV-DFDLCIADG------SCINACPVNVFQWYDTPGHPASEKKADPVNEQACIFCM---ACVNVCPVAAIDVKPP 103 (103)
T ss_dssp SSEEE-ETTTCCCCC------HHHHHCTTCCCEEEECTTCSSCSEEEECTTGGGCCCCC---HHHHHCTTCCEEECCC
T ss_pred ceEEE-ehhhCCChh------hHHHHcCccCeecccccCccccccceeecCcccccChh---hHHHhccccceEecCC
Confidence 45666 778899886 799999999998765321 1123568899999999 9999999999999876
No 243
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.07 E-value=3.1e-06 Score=90.42 Aligned_cols=43 Identities=30% Similarity=0.526 Sum_probs=38.6
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCccc
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHII 153 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~ 153 (644)
..+||+|||||++||++|+.|++. +|.+|+|+|+++.+||++.
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~~-----~g~~v~v~E~~~~~GG~~~ 48 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVATQ-----LDKRVLVLERRPHIGGNAY 48 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHH-----SCCCEEEECSSSSSSGGGC
T ss_pred ccCCEEEECCCHHHHHHHHHHHHh-----CCCCEEEEeCCCCCCCeee
Confidence 468999999999999999999986 3899999999999998653
No 244
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.06 E-value=3.2e-06 Score=90.80 Aligned_cols=42 Identities=33% Similarity=0.549 Sum_probs=38.5
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCC-CeEEEEcCCCCCCCccc
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVD-LSVCVVEKGAEVGAHII 153 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G-~~V~viEk~~~~g~~~~ 153 (644)
+.+||+|||||++||+||+.|++. | .+|+|+|+.+.+|+++.
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~------g~~~v~v~E~~~~~GG~~~ 47 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQA------GFHDYTILERTDHVGGKCH 47 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHT------TCCCEEEECSSSCSSTTCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHhC------CCCcEEEEECCCCCCCccc
Confidence 458999999999999999999999 9 89999999999988653
No 245
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.03 E-value=4e-06 Score=89.19 Aligned_cols=43 Identities=35% Similarity=0.493 Sum_probs=39.3
Q ss_pred cccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCccc
Q 006466 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHII 153 (644)
Q Consensus 105 ~~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~ 153 (644)
...+||+|||||++||++|+.|++. |.+|+|+|+++.+|+.+.
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~~------g~~v~v~E~~~~~GG~~~ 69 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLASS------GQRVLIVDRRPHIGGNAY 69 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSSGGGC
T ss_pred CCCCCEEEECccHHHHHHHHHHHHC------CCceEEEeccCCCCCccc
Confidence 3468999999999999999999999 999999999999988764
No 246
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.02 E-value=2.3e-05 Score=85.84 Aligned_cols=103 Identities=23% Similarity=0.255 Sum_probs=77.3
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcEE
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKFW 187 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 187 (644)
..|+|||||..|+.+|..|++. |.+|+++++...+.. +
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~------g~~Vtlv~~~~~l~~-------~----------------------------- 225 (483)
T 3dgh_A 188 GKTLVVGAGYIGLECAGFLKGL------GYEPTVMVRSIVLRG-------F----------------------------- 225 (483)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSCSSTT-------S-----------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHHc------CCEEEEEeCCCCCcc-------c-----------------------------
Confidence 4799999999999999999999 999999998432110 0
Q ss_pred EeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccccc
Q 006466 188 FLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQ 267 (644)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~~ 267 (644)
-..+.+.+.+.+++.||++++++.|+++..++++.+ .|++.+. .+|+
T Consensus 226 -----------------------d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~~---~~~~------ 272 (483)
T 3dgh_A 226 -----------------------DQQMAELVAASMEERGIPFLRKTVPLSVEKQDDGKL-LVKYKNV---ETGE------ 272 (483)
T ss_dssp -----------------------CHHHHHHHHHHHHHTTCCEEETEEEEEEEECTTSCE-EEEEEET---TTCC------
T ss_pred -----------------------CHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcE-EEEEecC---CCCc------
Confidence 023456678888889999999999999987665544 4665541 1121
Q ss_pred cceEEEcCEEEEecCCCCc
Q 006466 268 RGVELRGRITLLAEGCRGS 286 (644)
Q Consensus 268 ~g~~i~a~~vV~A~G~~s~ 286 (644)
..++.+|.||.|+|..+.
T Consensus 273 -~~~~~~D~vi~a~G~~p~ 290 (483)
T 3dgh_A 273 -ESEDVYDTVLWAIGRKGL 290 (483)
T ss_dssp -EEEEEESEEEECSCEEEC
T ss_pred -eeEEEcCEEEECcccccC
Confidence 247999999999997653
No 247
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.02 E-value=2.2e-05 Score=80.25 Aligned_cols=98 Identities=17% Similarity=0.181 Sum_probs=71.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcE
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (644)
...|+|||+|+.|+.+|..|++. |.+|+++++.+.+.. +
T Consensus 143 ~~~v~VvG~G~~g~e~A~~l~~~------g~~Vtlv~~~~~~~~--------~--------------------------- 181 (311)
T 2q0l_A 143 NKEVAVLGGGDTAVEEAIYLANI------CKKVYLIHRRDGFRC--------A--------------------------- 181 (311)
T ss_dssp TSEEEEECCSHHHHHHHHHHHTT------SSEEEEECSSSSCCS--------C---------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhc------CCEEEEEeeCCccCC--------C---------------------------
Confidence 36799999999999999999999 999999998765421 0
Q ss_pred EEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHH-hcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccc
Q 006466 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAE-ELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKEN 265 (644)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~-~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~ 265 (644)
..+.+.+. +.||++++++.++++..++ +.+.+|.+.+. .+|+
T Consensus 182 -----------------------------~~~~~~l~~~~gv~v~~~~~v~~i~~~~-~~v~~v~~~~~---~~g~---- 224 (311)
T 2q0l_A 182 -----------------------------PITLEHAKNNDKIEFLTPYVVEEIKGDA-SGVSSLSIKNT---ATNE---- 224 (311)
T ss_dssp -----------------------------HHHHHHHHTCTTEEEETTEEEEEEEEET-TEEEEEEEEET---TTCC----
T ss_pred -----------------------------HHHHHHHhhCCCeEEEeCCEEEEEECCC-CcEeEEEEEec---CCCc----
Confidence 01233333 4699999999999998764 44556666420 1222
Q ss_pred cccceEEEcCEEEEecCCCC
Q 006466 266 FQRGVELRGRITLLAEGCRG 285 (644)
Q Consensus 266 ~~~g~~i~a~~vV~A~G~~s 285 (644)
..++.+|.||.|+|..+
T Consensus 225 ---~~~i~~D~vi~a~G~~p 241 (311)
T 2q0l_A 225 ---KRELVVPGFFIFVGYDV 241 (311)
T ss_dssp ---EEEEECSEEEECSCEEE
T ss_pred ---eEEEecCEEEEEecCcc
Confidence 14799999999999664
No 248
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.01 E-value=4.4e-06 Score=88.14 Aligned_cols=41 Identities=37% Similarity=0.484 Sum_probs=37.8
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCC-CCCCCcc
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKG-AEVGAHI 152 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~-~~~g~~~ 152 (644)
..+||+|||||++||++|+.|++. |++|+|+|++ +.+|+.+
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~------G~~V~VlE~~~~~vGGr~ 84 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRA------GHDVTILEANANRVGGRI 84 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHT------SCEEEEECSCSSCCBTTC
T ss_pred CCceEEEECCCHHHHHHHHHHHHC------CCcEEEEeccccccCCce
Confidence 468999999999999999999999 9999999999 8888754
No 249
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=97.99 E-value=4.8e-05 Score=77.83 Aligned_cols=108 Identities=19% Similarity=0.183 Sum_probs=77.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcE
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (644)
...|+|||+|+.|+.+|..|++. |.+|+++++.+.+...
T Consensus 154 ~~~v~vvG~G~~~~e~a~~l~~~------g~~v~~~~~~~~~~~~----------------------------------- 192 (323)
T 3f8d_A 154 NRVVAVIGGGDSALEGAEILSSY------STKVYLIHRRDTFKAQ----------------------------------- 192 (323)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHH------SSEEEEECSSSSCCSC-----------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHh------CCeEEEEEeCCCCCcC-----------------------------------
Confidence 45799999999999999999999 9999999998754210
Q ss_pred EEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHH-hcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccc
Q 006466 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAE-ELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKEN 265 (644)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~-~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~ 265 (644)
.. +.+++. +.||++++++.++++..+ +.+.+|.+.+. .+|+
T Consensus 193 ----------------------------~~-~~~~~~~~~gv~~~~~~~v~~i~~~--~~~~~v~~~~~---~~g~---- 234 (323)
T 3f8d_A 193 ----------------------------PI-YVETVKKKPNVEFVLNSVVKEIKGD--KVVKQVVVENL---KTGE---- 234 (323)
T ss_dssp ----------------------------HH-HHHHHHTCTTEEEECSEEEEEEEES--SSEEEEEEEET---TTCC----
T ss_pred ----------------------------HH-HHHHHHhCCCcEEEeCCEEEEEecc--CceeEEEEEEC---CCCc----
Confidence 01 223333 459999999999999765 44656776541 1232
Q ss_pred cccceEEEcCEEEEecCCCCcchHHHHHHcCCC
Q 006466 266 FQRGVELRGRITLLAEGCRGSLSEKLIKNFKLR 298 (644)
Q Consensus 266 ~~~g~~i~a~~vV~A~G~~s~l~~~l~~~~~~~ 298 (644)
..++.+|.||.|+|..+. ..+.+.+++.
T Consensus 235 ---~~~~~~D~vv~a~G~~p~--~~~~~~~g~~ 262 (323)
T 3f8d_A 235 ---IKELNVNGVFIEIGFDPP--TDFAKSNGIE 262 (323)
T ss_dssp ---EEEEECSEEEECCCEECC--HHHHHHTTCC
T ss_pred ---eEEEEcCEEEEEECCCCC--hhHHhhcCee
Confidence 247999999999998774 2344445444
No 250
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.99 E-value=6.6e-06 Score=90.60 Aligned_cols=36 Identities=17% Similarity=0.245 Sum_probs=32.6
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCC
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~ 147 (644)
.+..|||||||+||+++|..|++. +++|+|||+.+.
T Consensus 41 ~KprVVIIGgG~AGl~~A~~L~~~------~~~VtLId~~~~ 76 (502)
T 4g6h_A 41 DKPNVLILGSGWGAISFLKHIDTK------KYNVSIISPRSY 76 (502)
T ss_dssp SSCEEEEECSSHHHHHHHHHSCTT------TCEEEEEESSSE
T ss_pred CCCCEEEECCcHHHHHHHHHhhhC------CCcEEEECCCCC
Confidence 356899999999999999999988 999999999864
No 251
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.98 E-value=5.3e-06 Score=90.96 Aligned_cols=41 Identities=34% Similarity=0.596 Sum_probs=38.2
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcc
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHI 152 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~ 152 (644)
+.+||+|||||++||+||+.|++. |++|+|+|+.+.+|+++
T Consensus 10 ~~~~v~IIGaG~aGl~aA~~L~~~------g~~v~v~E~~~~~GG~~ 50 (489)
T 2jae_A 10 GSHSVVVLGGGPAGLCSAFELQKA------GYKVTVLEARTRPGGRV 50 (489)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSCTTC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC------CCCEEEEeccCCCCCce
Confidence 467999999999999999999999 99999999999998864
No 252
>2fdn_A Ferredoxin; electron transport, iron-sulfur, 4Fe-4S; 0.94A {Clostridium acidurici} SCOP: d.58.1.1 PDB: 1fdn_A 1fca_A 1clf_A 1dur_A
Probab=97.97 E-value=3.2e-06 Score=62.87 Aligned_cols=50 Identities=20% Similarity=0.294 Sum_probs=42.8
Q ss_pred CCCccccCCCCCCCCcceeeCCeeEEEecCCCCceeEEEecCCcccCCCCcceeeeCCCCCcee
Q 006466 567 PKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQINAQNCLHCKDFQACDIKDPKQNIKW 630 (644)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~cpa~~y~~~~~~~~~~~~~~~~~~c~~c~~~~~c~~~~p~~~i~w 630 (644)
.+.|..|. .|...||.+++++.++ .+.+|.+.|+.|| .|...||+++|++
T Consensus 5 ~~~C~~C~------~C~~~CP~~ai~~~~~-----~~~~~~~~C~~C~---~C~~~CP~~ai~~ 54 (55)
T 2fdn_A 5 NEACISCG------ACEPECPVNAISSGDD-----RYVIDADTCIDCG---ACAGVCPVDAPVQ 54 (55)
T ss_dssp CTTCCCCC------TTGGGCTTCCEECCSS-----SCEECTTTCCCCC---HHHHTCTTCCEEE
T ss_pred cccCcChh------hHHHHCCccccCcCCC-----EEEeccccCcChh---ChHHHccccceec
Confidence 45687776 7999999999987543 5679999999999 9999999999976
No 253
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.97 E-value=2.7e-05 Score=80.48 Aligned_cols=99 Identities=13% Similarity=0.195 Sum_probs=72.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcE
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (644)
...|+|||+|..|+.+|..|++. |.+|+++++.+.+..
T Consensus 159 ~~~v~VvG~G~~g~e~A~~l~~~------g~~V~lv~~~~~~~~------------------------------------ 196 (333)
T 1vdc_A 159 NKPLAVIGGGDSAMEEANFLTKY------GSKVYIIHRRDAFRA------------------------------------ 196 (333)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTT------SSEEEEECSSSSCCS------------------------------------
T ss_pred CCeEEEECCChHHHHHHHHHHhc------CCeEEEEecCCcCCc------------------------------------
Confidence 35799999999999999999998 999999999865321
Q ss_pred EEeccCCccccCCCCCCCCcEEEcHHHHHHHHH-HHHHhcCCEEecCceEEEEEEcCCC-cEEEEEeCcCccccCCCccc
Q 006466 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLG-GKAEELGVEIYPGFAASEILYDADN-KVIGIGTNDMGIAKDGSKKE 264 (644)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~-~~a~~~Gv~i~~g~~v~~v~~~~~g-~v~gV~~~d~g~~~~G~~~~ 264 (644)
...+. +..++.||+++++++++++..++++ .+.+|.+.+. .+|+
T Consensus 197 ----------------------------~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~---~~g~--- 242 (333)
T 1vdc_A 197 ----------------------------SKIMQQRALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNV---VTGD--- 242 (333)
T ss_dssp ----------------------------CHHHHHHHHTCTTEEEECSEEEEEEEESSSSSSEEEEEEEET---TTCC---
T ss_pred ----------------------------cHHHHHHHHhCCCeeEecCCceEEEeCCCCccceeeEEEEec---CCCc---
Confidence 01122 2235679999999999999876531 5656766530 1232
Q ss_pred ccccceEEEcCEEEEecCCCC
Q 006466 265 NFQRGVELRGRITLLAEGCRG 285 (644)
Q Consensus 265 ~~~~g~~i~a~~vV~A~G~~s 285 (644)
+.++.+|.||.|+|..+
T Consensus 243 ----~~~i~~D~vi~a~G~~p 259 (333)
T 1vdc_A 243 ----VSDLKVSGLFFAIGHEP 259 (333)
T ss_dssp ----EEEEECSEEEECSCEEE
T ss_pred ----eEEEecCEEEEEeCCcc
Confidence 26799999999999665
No 254
>1dwl_A Ferredoxin I; electron transfer, model, heteronuclear docking; HET: HEC; NMR {Desulfomicrobium norvegicum} SCOP: i.4.1.1
Probab=97.95 E-value=4.8e-06 Score=62.62 Aligned_cols=58 Identities=10% Similarity=0.126 Sum_probs=44.3
Q ss_pred cEEecCCCCccccCCCCCCCCcceeeCCeeEEEecCCCCceeEE-EecCCcccCCCCcceeeeCCCCCceee
Q 006466 561 HLRLRDPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQ-INAQNCLHCKDFQACDIKDPKQNIKWT 631 (644)
Q Consensus 561 h~~~~~~~~~~~~~~~~~~~~~~~~cpa~~y~~~~~~~~~~~~~-~~~~~c~~c~~~~~c~~~~p~~~i~w~ 631 (644)
|+.+ |++.|..|. .|...|| .++++.++ ++. ... ++.+.|..|+ .|...||+++|+|+
T Consensus 1 ~i~i-~~~~C~~C~------~C~~~Cp-~~~~~~~~-~~~-~~~~~~~~~c~~C~---~C~~~CP~~Ai~~~ 59 (59)
T 1dwl_A 1 TIVI-DHEECIGCE------SCVELCP-EVFAMIDG-EEK-AMVTAPDSTAECAQ---DAIDACPVEAISKE 59 (59)
T ss_dssp CEEE-SSCCCSSCC------GGGGTST-TTEEEEEC-SSC-EEESCTTCCCGGGG---TGGGGSTTCCEEEC
T ss_pred CeEE-ChhhCcChh------HHHHHCC-HHheecCC-CCc-EEEecChhhhhHHH---HHHHhCCHhhEEcC
Confidence 4555 778898876 6999999 48887322 121 223 5899999999 99999999999984
No 255
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.95 E-value=5.5e-06 Score=87.45 Aligned_cols=40 Identities=40% Similarity=0.614 Sum_probs=37.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCccc
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHII 153 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~ 153 (644)
+||+|||||++||++|+.|++. |.+|+|+|+++.+|+.+.
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~------g~~v~v~E~~~~~GG~~~ 41 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKL------NKKVLVIEKRNHIGGNAY 41 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGG------TCCEEEECSSSSSSGGGC
T ss_pred CCEEEECcCHHHHHHHHHHHhC------CCcEEEEecCCCCCcceE
Confidence 6999999999999999999999 999999999999988653
No 256
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.95 E-value=4.2e-05 Score=78.03 Aligned_cols=98 Identities=19% Similarity=0.217 Sum_probs=73.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcE
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (644)
...|+|||+|+.|+.+|..|++. |.+|+++++.+.+...
T Consensus 147 ~~~v~viG~g~~~~e~a~~l~~~------g~~v~~~~~~~~~~~~----------------------------------- 185 (315)
T 3r9u_A 147 NKEVAVLGGGDTALEEALYLANI------CSKIYLIHRRDEFRAA----------------------------------- 185 (315)
T ss_dssp TSEEEEECCBHHHHHHHHHHHTT------SSEEEEECSSSSCBSC-----------------------------------
T ss_pred cCEEEEECCCHHHHHHHHHHHhh------CCEEEEEEeCCCCCCC-----------------------------------
Confidence 35799999999999999999999 9999999988754210
Q ss_pred EEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCccccc
Q 006466 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (644)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~ 266 (644)
...+.+..++.||++++++.++++..++ +.+.+|++.. .+|+
T Consensus 186 ----------------------------~~~~~~~~~~~gv~~~~~~~v~~i~~~~-~~~~~v~~~~----~~g~----- 227 (315)
T 3r9u_A 186 ----------------------------PSTVEKVKKNEKIELITSASVDEVYGDK-MGVAGVKVKL----KDGS----- 227 (315)
T ss_dssp ----------------------------HHHHHHHHHCTTEEEECSCEEEEEEEET-TEEEEEEEEC----TTSC-----
T ss_pred ----------------------------HHHHHHHHhcCCeEEEeCcEEEEEEcCC-CcEEEEEEEc----CCCC-----
Confidence 1112233356899999999999998765 5666777652 2232
Q ss_pred ccceEEEcCEEEEecCCCC
Q 006466 267 QRGVELRGRITLLAEGCRG 285 (644)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s 285 (644)
..++.+|.||.|+|..+
T Consensus 228 --~~~~~~D~vv~a~G~~p 244 (315)
T 3r9u_A 228 --IRDLNVPGIFTFVGLNV 244 (315)
T ss_dssp --EEEECCSCEEECSCEEE
T ss_pred --eEEeecCeEEEEEcCCC
Confidence 14799999999999654
No 257
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.94 E-value=4.6e-05 Score=82.60 Aligned_cols=107 Identities=23% Similarity=0.316 Sum_probs=80.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcEE
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKFW 187 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 187 (644)
.+|+|||+|+.|+.+|..|++. |.+|+++|+.+.+.... +
T Consensus 149 ~~vvViGgG~~g~E~A~~l~~~------g~~Vtlv~~~~~~l~~~-----~----------------------------- 188 (449)
T 3kd9_A 149 ENVVIIGGGYIGIEMAEAFAAQ------GKNVTMIVRGERVLRRS-----F----------------------------- 188 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSSSTTTTT-----S-----------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhC------CCeEEEEEcCCccchhh-----c-----------------------------
Confidence 4799999999999999999999 99999999987543210 0
Q ss_pred EeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccccc
Q 006466 188 FLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQ 267 (644)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~~ 267 (644)
...+.+.+.+.+++. |++++++.++++..++ .+..|.+ +
T Consensus 189 -----------------------~~~~~~~l~~~l~~~-v~i~~~~~v~~i~~~~--~v~~v~~-~-------------- 227 (449)
T 3kd9_A 189 -----------------------DKEVTDILEEKLKKH-VNLRLQEITMKIEGEE--RVEKVVT-D-------------- 227 (449)
T ss_dssp -----------------------CHHHHHHHHHHHTTT-SEEEESCCEEEEECSS--SCCEEEE-T--------------
T ss_pred -----------------------CHHHHHHHHHHHHhC-cEEEeCCeEEEEeccC--cEEEEEe-C--------------
Confidence 023456677777778 9999999999987543 3433443 2
Q ss_pred cceEEEcCEEEEecCCCCcchHHHHHHcCCC
Q 006466 268 RGVELRGRITLLAEGCRGSLSEKLIKNFKLR 298 (644)
Q Consensus 268 ~g~~i~a~~vV~A~G~~s~l~~~l~~~~~~~ 298 (644)
+.++.+|.||.|+|.++.. .+.+..++.
T Consensus 228 -g~~i~~D~Vv~a~G~~p~~--~l~~~~gl~ 255 (449)
T 3kd9_A 228 -AGEYKAELVILATGIKPNI--ELAKQLGVR 255 (449)
T ss_dssp -TEEEECSEEEECSCEEECC--HHHHHTTCC
T ss_pred -CCEEECCEEEEeeCCccCH--HHHHhCCcc
Confidence 4689999999999988753 345566665
No 258
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.94 E-value=3.4e-05 Score=79.49 Aligned_cols=97 Identities=21% Similarity=0.234 Sum_probs=71.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcE
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (644)
...|+|||+|+.|+.+|..|++. |.+|+++++.+.+..
T Consensus 152 ~~~v~VvG~G~~g~e~A~~l~~~------g~~Vtlv~~~~~~~~------------------------------------ 189 (325)
T 2q7v_A 152 GKKVVVIGGGDAAVEEGMFLTKF------ADEVTVIHRRDTLRA------------------------------------ 189 (325)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTT------CSEEEEECSSSSCCS------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhc------CCEEEEEeCCCcCCc------------------------------------
Confidence 35799999999999999999998 999999998764321
Q ss_pred EEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHH-hcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccc
Q 006466 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAE-ELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKEN 265 (644)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~-~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~ 265 (644)
...+.+++. +.||+++++++++++..+ +.+.+|.+.+. .+|+
T Consensus 190 ----------------------------~~~~~~~l~~~~gv~i~~~~~v~~i~~~--~~v~~v~~~~~---~~g~---- 232 (325)
T 2q7v_A 190 ----------------------------NKVAQARAFANPKMKFIWDTAVEEIQGA--DSVSGVKLRNL---KTGE---- 232 (325)
T ss_dssp ----------------------------CHHHHHHHHTCTTEEEECSEEEEEEEES--SSEEEEEEEET---TTCC----
T ss_pred ----------------------------chHHHHHHHhcCCceEecCCceEEEccC--CcEEEEEEEEC---CCCc----
Confidence 001233333 369999999999999864 45667776520 1232
Q ss_pred cccceEEEcCEEEEecCCCC
Q 006466 266 FQRGVELRGRITLLAEGCRG 285 (644)
Q Consensus 266 ~~~g~~i~a~~vV~A~G~~s 285 (644)
..++.+|.||.|+|..+
T Consensus 233 ---~~~i~~D~vi~a~G~~p 249 (325)
T 2q7v_A 233 ---VSELATDGVFIFIGHVP 249 (325)
T ss_dssp ---EEEEECSEEEECSCEEE
T ss_pred ---EEEEEcCEEEEccCCCC
Confidence 24799999999999654
No 259
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.93 E-value=5.2e-05 Score=83.13 Aligned_cols=103 Identities=20% Similarity=0.178 Sum_probs=75.9
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcEE
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKFW 187 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 187 (644)
-.|+|||||+.|+.+|..|++. |.+|+++++...+.. +
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~------g~~Vtlv~~~~~l~~-------~----------------------------- 223 (488)
T 3dgz_A 186 GKTLVVGASYVALECAGFLTGI------GLDTTVMMRSIPLRG-------F----------------------------- 223 (488)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT------TCCEEEEESSCSSTT-------S-----------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHc------CCceEEEEcCccccc-------C-----------------------------
Confidence 4699999999999999999999 999999998642211 0
Q ss_pred EeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccccc
Q 006466 188 FLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQ 267 (644)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~~ 267 (644)
-..+.+.+.+.+++.||++++++.++++...+++.+ .|.+.+. .+|+
T Consensus 224 -----------------------d~~~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~~~~-~v~~~~~---~~g~------ 270 (488)
T 3dgz_A 224 -----------------------DQQMSSLVTEHMESHGTQFLKGCVPSHIKKLPTNQL-QVTWEDH---ASGK------ 270 (488)
T ss_dssp -----------------------CHHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCE-EEEEEET---TTTE------
T ss_pred -----------------------CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcE-EEEEEeC---CCCe------
Confidence 023456677888889999999999999987554544 3554430 0111
Q ss_pred cceEEEcCEEEEecCCCCc
Q 006466 268 RGVELRGRITLLAEGCRGS 286 (644)
Q Consensus 268 ~g~~i~a~~vV~A~G~~s~ 286 (644)
..++.+|.||.|+|..+.
T Consensus 271 -~~~~~~D~vi~a~G~~p~ 288 (488)
T 3dgz_A 271 -EDTGTFDTVLWAIGRVPE 288 (488)
T ss_dssp -EEEEEESEEEECSCEEES
T ss_pred -eEEEECCEEEEcccCCcc
Confidence 135899999999997654
No 260
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=97.92 E-value=6.3e-06 Score=92.53 Aligned_cols=59 Identities=20% Similarity=0.371 Sum_probs=43.4
Q ss_pred HHHHHHHhcCCEEecCceEEEEEEcCC---CcEEEEEeCcCccccCCCcccccccceEEEc-CEEEEecCCCCc
Q 006466 217 WLGGKAEELGVEIYPGFAASEILYDAD---NKVIGIGTNDMGIAKDGSKKENFQRGVELRG-RITLLAEGCRGS 286 (644)
Q Consensus 217 ~L~~~a~~~Gv~i~~g~~v~~v~~~~~---g~v~gV~~~d~g~~~~G~~~~~~~~g~~i~a-~~vV~A~G~~s~ 286 (644)
+|...+++.|++|+.++.|++|+.+++ ++++||...+ .+|+ ..+++| +.||+|+|+...
T Consensus 236 ~l~~~~~~~nl~i~~~~~v~~l~~~~~~~~~~~~GV~~~~----~~g~-------~~~v~A~k~VILaaG~~~s 298 (587)
T 1gpe_A 236 WLLPNYQRSNLEILTGQMVGKVLFKQTASGPQAVGVNFGT----NKAV-------NFDVFAKHEVLLAAGSAIS 298 (587)
T ss_dssp HTTTTTTCTTEEEEESCEEEEEEEEEETTEEEEEEEEEEE----ETTE-------EEEEEEEEEEEECSCTTTH
T ss_pred HHHHhhcCCCcEEEcCCEEEEEEECCCCCCCEEEEEEEEe----CCCc-------EEEEEecccEEEccCCCCC
Confidence 343444556899999999999998753 4788998753 2333 256889 899999999763
No 261
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.92 E-value=7.1e-06 Score=90.23 Aligned_cols=41 Identities=39% Similarity=0.579 Sum_probs=37.8
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcc
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHI 152 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~ 152 (644)
+.+||+|||||++||++|+.|++. |++|+|+|+.+.+|+.+
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~------g~~v~v~E~~~~~GG~~ 52 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIH------GLNVTVFEAEGKAGGKL 52 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTT------SCEEEEECSSSSSCSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC------CCcEEEEEeCCCCCCce
Confidence 458999999999999999999999 99999999999998865
No 262
>2v2k_A Ferredoxin; iron, transport, iron-sulfur, mycobacterium tuberculosis, Fe cluster, metal-binding, electron transfer, transport; 1.6A {Mycobacterium smegmatis}
Probab=97.91 E-value=2.7e-06 Score=72.72 Aligned_cols=55 Identities=20% Similarity=0.264 Sum_probs=46.5
Q ss_pred CCCCccccCCCCCCCCcceeeCCeeEEEecCCCCceeEEEecCCcccCCCCcceeeeCCCCCceeeC
Q 006466 566 DPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQINAQNCLHCKDFQACDIKDPKQNIKWTV 632 (644)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~cpa~~y~~~~~~~~~~~~~~~~~~c~~c~~~~~c~~~~p~~~i~w~~ 632 (644)
|++.|+.|. .+.|+.+||.+++.+.++ .+.||.+.|+.|| .|...||+++|++..
T Consensus 4 ~~~~C~~C~----c~~C~~~CP~~ai~~~~~-----~~~~~~~~C~~Cg---~C~~~CP~~Ai~~~~ 58 (105)
T 2v2k_A 4 IAEPCVDVK----DKACIEECPVDCIYEGAR-----MLYIHPDECVDCG---ACEPVCPVEAIYYED 58 (105)
T ss_dssp ECGGGTTTC----CCHHHHHCTTCCEEECSS-----CEEECTTTCCCCC---CSGGGCTTCCEEEGG
T ss_pred ecccCCCCC----cChhhhhcCccccCcCCC-----cEEEeCCcCcchh---hHHHhCCccCEEecC
Confidence 557788774 458999999999987643 5889999999999 999999999998863
No 263
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=97.90 E-value=2.7e-06 Score=90.52 Aligned_cols=86 Identities=19% Similarity=0.188 Sum_probs=67.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcEE
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKFW 187 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 187 (644)
.+|+|||||+.|+.+|..|++. |.+|+|+|+.+.+.... +
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~~------g~~Vtvv~~~~~~l~~~-----~----------------------------- 186 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIIDS------GTPASIGIILEYPLERQ-----L----------------------------- 186 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHHH------TCCEEEECSSSSSCTTT-----S-----------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhC------CCeEEEEEcCCccchhh-----c-----------------------------
Confidence 5799999999999999999999 99999999988653210 0
Q ss_pred EeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccccc
Q 006466 188 FLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQ 267 (644)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~~ 267 (644)
...+.+.+.+.+++.||++++++.++++
T Consensus 187 -----------------------~~~~~~~~~~~l~~~gV~~~~~~~v~~i----------------------------- 214 (385)
T 3klj_A 187 -----------------------DRDGGLFLKDKLDRLGIKIYTNSNFEEM----------------------------- 214 (385)
T ss_dssp -----------------------CHHHHHHHHHHHHTTTCEEECSCCGGGC-----------------------------
T ss_pred -----------------------CHHHHHHHHHHHHhCCCEEEeCCEEEEc-----------------------------
Confidence 0234566777788899999999877544
Q ss_pred cceEEEcCEEEEecCCCCc
Q 006466 268 RGVELRGRITLLAEGCRGS 286 (644)
Q Consensus 268 ~g~~i~a~~vV~A~G~~s~ 286 (644)
|.++.+|.||.|+|.++.
T Consensus 215 -g~~~~~D~vv~a~G~~p~ 232 (385)
T 3klj_A 215 -GDLIRSSCVITAVGVKPN 232 (385)
T ss_dssp -HHHHHHSEEEECCCEEEC
T ss_pred -CeEEecCeEEECcCcccC
Confidence 135789999999997653
No 264
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.88 E-value=5e-05 Score=83.49 Aligned_cols=107 Identities=19% Similarity=0.274 Sum_probs=74.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhc--------CCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeee
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREK--------NVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRV 179 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~--------~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~ 179 (644)
..++|||||++|+.+|..|+....+. ..+.+|+|+|..+.+... +
T Consensus 218 ~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il~~------~--------------------- 270 (502)
T 4g6h_A 218 LSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNM------F--------------------- 270 (502)
T ss_dssp TEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSSTT------S---------------------
T ss_pred cceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccccC------C---------------------
Confidence 46999999999999999987642110 014789999998865320 0
Q ss_pred eccCCcEEEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccC
Q 006466 180 PVSSDKFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKD 259 (644)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~ 259 (644)
...+.+.+.+.+++.||+|+++++|+++. +++.+..+... |
T Consensus 271 -------------------------------~~~~~~~~~~~L~~~GV~v~~~~~v~~v~--~~~~~~~~~~~------d 311 (502)
T 4g6h_A 271 -------------------------------EKKLSSYAQSHLENTSIKVHLRTAVAKVE--EKQLLAKTKHE------D 311 (502)
T ss_dssp -------------------------------CHHHHHHHHHHHHHTTCEEETTEEEEEEC--SSEEEEEEECT------T
T ss_pred -------------------------------CHHHHHHHHHHHHhcceeeecCceEEEEe--CCceEEEEEec------C
Confidence 03446667888889999999999999884 32333333332 3
Q ss_pred CCcccccccceEEEcCEEEEecCCCC
Q 006466 260 GSKKENFQRGVELRGRITLLAEGCRG 285 (644)
Q Consensus 260 G~~~~~~~~g~~i~a~~vV~A~G~~s 285 (644)
|+. .+.+|.+|.||.|+|..+
T Consensus 312 g~~-----~~~~i~ad~viwa~Gv~~ 332 (502)
T 4g6h_A 312 GKI-----TEETIPYGTLIWATGNKA 332 (502)
T ss_dssp SCE-----EEEEEECSEEEECCCEEC
T ss_pred ccc-----ceeeeccCEEEEccCCcC
Confidence 331 135799999999999765
No 265
>1bc6_A 7-Fe ferredoxin; electron transport, iron-sulfur; NMR {Bacillus schlegelii} SCOP: d.58.1.2 PDB: 1bd6_A 1bqx_A 1bwe_A
Probab=97.87 E-value=3.7e-06 Score=67.35 Aligned_cols=54 Identities=19% Similarity=0.285 Sum_probs=45.4
Q ss_pred CCCCccccCCCCCCCCcceeeCCeeEEEecCCCCceeEEEecCCcccCCCCcceeeeCCCCCceee
Q 006466 566 DPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQINAQNCLHCKDFQACDIKDPKQNIKWT 631 (644)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~cpa~~y~~~~~~~~~~~~~~~~~~c~~c~~~~~c~~~~p~~~i~w~ 631 (644)
|++.|..|. .+.|+..||.+++.+.++ .+.||.+.|+.|| .|...||+++|++.
T Consensus 4 ~~~~C~~c~----C~~C~~~Cp~~ai~~~~~-----~~~~~~~~C~~Cg---~C~~~CP~~ai~~~ 57 (77)
T 1bc6_A 4 ITEPCIGTK----DASCVEVCPVDCIHEGED-----QYYIDPDVCIDCG---ACEAVCPVSAIYHE 57 (77)
T ss_dssp CCSTTTTCC----CCSSTTTCTTCCEEECSS-----SEEECTTTCCSCC---SHHHHSGGGSSEET
T ss_pred eCccCCCCC----cchhHHhcccccEEeCCC-----cEEECcccCcCcc---CCHhhcCccceEec
Confidence 667788742 347999999999987543 6889999999999 99999999999875
No 266
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.87 E-value=6.6e-05 Score=83.00 Aligned_cols=98 Identities=24% Similarity=0.274 Sum_probs=73.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcE
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (644)
..+|+|||||..|+.+|..|++. |.+|+++++.+.+..
T Consensus 355 ~k~V~ViGgG~~g~E~A~~L~~~------g~~Vtlv~~~~~l~~------------------------------------ 392 (521)
T 1hyu_A 355 GKRVAVIGGGNSGVEAAIDLAGI------VEHVTLLEFAPEMKA------------------------------------ 392 (521)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHH------BSEEEEECSSSSCCS------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhh------CCEEEEEEeCcccCc------------------------------------
Confidence 35799999999999999999999 999999998765421
Q ss_pred EEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHh-cCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccc
Q 006466 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEE-LGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKEN 265 (644)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~-~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~ 265 (644)
...+.+.+++ .||++++++.++++..++ +.+.+|.+.+. .+|+
T Consensus 393 ----------------------------~~~l~~~l~~~~gV~v~~~~~v~~i~~~~-~~v~~v~~~~~---~~g~---- 436 (521)
T 1hyu_A 393 ----------------------------DQVLQDKVRSLKNVDIILNAQTTEVKGDG-SKVVGLEYRDR---VSGD---- 436 (521)
T ss_dssp ----------------------------CHHHHHHHTTCTTEEEECSEEEEEEEECS-SSEEEEEEEET---TTCC----
T ss_pred ----------------------------CHHHHHHHhcCCCcEEEeCCEEEEEEcCC-CcEEEEEEEeC---CCCc----
Confidence 0124445555 589999999999997654 56767777541 1232
Q ss_pred cccceEEEcCEEEEecCCCC
Q 006466 266 FQRGVELRGRITLLAEGCRG 285 (644)
Q Consensus 266 ~~~g~~i~a~~vV~A~G~~s 285 (644)
..++.+|.||.|.|..+
T Consensus 437 ---~~~i~~D~vi~a~G~~p 453 (521)
T 1hyu_A 437 ---IHSVALAGIFVQIGLLP 453 (521)
T ss_dssp ---EEEEECSEEEECCCEEE
T ss_pred ---eEEEEcCEEEECcCCCC
Confidence 24789999999999554
No 267
>3eun_A Ferredoxin; electron transport, [4Fe-4S] cluster, 4Fe-4S, iron, iron-sulfur, metal-binding, transport; 1.05A {Allochromatium vinosum} SCOP: d.58.1.1 PDB: 1blu_A 3exy_A
Probab=97.86 E-value=4.9e-06 Score=67.59 Aligned_cols=57 Identities=14% Similarity=0.092 Sum_probs=46.9
Q ss_pred cCCCCccccCCCCCCCCcceeeCCeeEEEecCCCCceeEEEecCCcccCCC---CcceeeeCCCCCceeeC
Q 006466 565 RDPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQINAQNCLHCKD---FQACDIKDPKQNIKWTV 632 (644)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~cpa~~y~~~~~~~~~~~~~~~~~~c~~c~~---~~~c~~~~p~~~i~w~~ 632 (644)
.|++.|+.|. .|..+||.+++.+.++ .+.||.+.|+.|+. -..|...||+++|+|..
T Consensus 3 ~~~~~C~~C~------~C~~~CP~~ai~~~~~-----~~~i~~~~C~~C~~~~~~~~C~~~CP~~Ai~~~~ 62 (82)
T 3eun_A 3 MITDECINCD------VCEPECPNGAISQGDE-----TYVIEPSLCTECVGHYETSQCVEVCPVDAIIKDP 62 (82)
T ss_dssp EECTTCCCCC------TTGGGCTTCCEEECSS-----SEEECGGGCCTTTTTCSSCHHHHHCTTCCEEECG
T ss_pred EeCCCCcCcc------chHHHCChhheEcCCC-----ceEEchhhcCCCCCCCCccHHHHhCCccceEEcC
Confidence 3567898876 7999999999998644 68899999999971 11599999999998863
No 268
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.86 E-value=5.4e-05 Score=79.26 Aligned_cols=105 Identities=15% Similarity=0.258 Sum_probs=71.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcEE
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKFW 187 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 187 (644)
..|+|||+|..|+.+|..|++. |.+|+++++.+.+... .+.
T Consensus 167 ~~vvVvG~G~~g~e~a~~l~~~------g~~V~lv~~~~~~~~~-----------------~~d---------------- 207 (369)
T 3d1c_A 167 GQYVVIGGNESGFDAAYQLAKN------GSDIALYTSTTGLNDP-----------------DAD---------------- 207 (369)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT------TCEEEEECC-------------------------------------------
T ss_pred CEEEEECCCcCHHHHHHHHHhc------CCeEEEEecCCCCCCC-----------------CCC----------------
Confidence 4799999999999999999999 9999999998653210 000
Q ss_pred EeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcC-CEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCccccc
Q 006466 188 FLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELG-VEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (644)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~G-v~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~ 266 (644)
..+.+ ...+.+.+.+.+++.| |++++++.|+++..++ +. ..|.+.+
T Consensus 208 -----~~~~~-------------~~~~~~~l~~~l~~~g~v~~~~~~~v~~i~~~~-~~-~~v~~~~------------- 254 (369)
T 3d1c_A 208 -----PSVRL-------------SPYTRQRLGNVIKQGARIEMNVHYTVKDIDFNN-GQ-YHISFDS------------- 254 (369)
T ss_dssp -----CTTSC-------------CHHHHHHHHHHHHTTCCEEEECSCCEEEEEEET-TE-EEEEESS-------------
T ss_pred -----CCccC-------------CHHHHHHHHHHHhhCCcEEEecCcEEEEEEecC-Cc-eEEEecC-------------
Confidence 00000 1233556667777787 9999999999997654 32 3566654
Q ss_pred ccceEEE-cCEEEEecCCCCc
Q 006466 267 QRGVELR-GRITLLAEGCRGS 286 (644)
Q Consensus 267 ~~g~~i~-a~~vV~A~G~~s~ 286 (644)
|.++. +|.||.|+|..+.
T Consensus 255 --g~~~~~~d~vi~a~G~~~~ 273 (369)
T 3d1c_A 255 --GQSVHTPHEPILATGFDAT 273 (369)
T ss_dssp --SCCEEESSCCEECCCBCGG
T ss_pred --CeEeccCCceEEeeccCCc
Confidence 44454 6999999998764
No 269
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.83 E-value=5.1e-05 Score=78.00 Aligned_cols=97 Identities=15% Similarity=0.213 Sum_probs=72.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcE
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (644)
...|+|||+|..|+.+|..|++. +.+|+++++.+.+...
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~~~------~~~v~~~~~~~~~~~~----------------------------------- 192 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLEPI------AKEVSIIHRRDKFRAH----------------------------------- 192 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTT------BSEEEEECSSSSCSSC-----------------------------------
T ss_pred CCEEEEECCCHhHHHHHHHHHhh------CCeEEEEEecCcCCcc-----------------------------------
Confidence 35799999999999999999998 9999999988754210
Q ss_pred EEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCccccc
Q 006466 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (644)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~ 266 (644)
. ...+.+++.||+++.++.++++..+++ +.+|.+.+. .+|+
T Consensus 193 ----------------------------~-~~~~~l~~~gv~~~~~~~v~~i~~~~~--~~~v~~~~~---~~g~----- 233 (332)
T 3lzw_A 193 ----------------------------E-HSVENLHASKVNVLTPFVPAELIGEDK--IEQLVLEEV---KGDR----- 233 (332)
T ss_dssp ----------------------------H-HHHHHHHHSSCEEETTEEEEEEECSSS--CCEEEEEET---TSCC-----
T ss_pred ----------------------------H-HHHHHHhcCCeEEEeCceeeEEecCCc--eEEEEEEec---CCCc-----
Confidence 0 012335678999999999999976553 445666541 1222
Q ss_pred ccceEEEcCEEEEecCCCC
Q 006466 267 QRGVELRGRITLLAEGCRG 285 (644)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s 285 (644)
+.++.+|.||.|+|..+
T Consensus 234 --~~~~~~D~vv~a~G~~p 250 (332)
T 3lzw_A 234 --KEILEIDDLIVNYGFVS 250 (332)
T ss_dssp --EEEEECSEEEECCCEEC
T ss_pred --eEEEECCEEEEeeccCC
Confidence 46799999999999665
No 270
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.83 E-value=1.3e-05 Score=85.17 Aligned_cols=41 Identities=22% Similarity=0.408 Sum_probs=37.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCccc
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHII 153 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~ 153 (644)
++||+|||||++|+++|..|++. |.+|+|+|+++.+|+++.
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~------g~~v~v~E~~~~~GG~~~ 43 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEK------GHQVHIIDQRDHIGGNSY 43 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT------TCEEEEEESSSSSSGGGC
T ss_pred cCCEEEECcCHHHHHHHHHHHHC------CCcEEEEEecCCcCCccc
Confidence 47999999999999999999999 999999999999987653
No 271
>1h98_A Ferredoxin; electron transport, thermophilic, iron-sulfur, azotobacter, hydrogen bonds, stability, high resolution; 1.64A {Thermus aquaticus} SCOP: d.58.1.2
Probab=97.82 E-value=3.2e-06 Score=67.98 Aligned_cols=55 Identities=20% Similarity=0.210 Sum_probs=45.3
Q ss_pred CCCCccccCCCCCCCCcceeeCCeeEEEecCCCCceeEEEecCCcccCCCCcceeeeCCCCCceeeC
Q 006466 566 DPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQINAQNCLHCKDFQACDIKDPKQNIKWTV 632 (644)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~cpa~~y~~~~~~~~~~~~~~~~~~c~~c~~~~~c~~~~p~~~i~w~~ 632 (644)
|++.|..|. .+.|+.+||.+++.+.++ .+.||.+.|+.|| .|...||+++|++..
T Consensus 4 ~~~~C~~c~----C~~C~~~CP~~ai~~~~~-----~~~~~~~~C~~C~---~C~~~CP~~Ai~~~~ 58 (78)
T 1h98_A 4 ICEPCIGVK----DQSCVEVCPVECIYDGGD-----QFYIHPEECIDCG---ACVPACPVNAIYPEE 58 (78)
T ss_dssp ECGGGTTTC----CCHHHHHCTTCCEEECSS-----SEEECTTTCCCCC---THHHHCTTCCEEEGG
T ss_pred EchhCCCCC----cChhhhhcCccceEcCCC-----EEEECcccCCcHh---HHHHhCCccceEecc
Confidence 556787742 347999999999987643 5889999999999 999999999998643
No 272
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.80 E-value=1.6e-05 Score=87.41 Aligned_cols=42 Identities=45% Similarity=0.510 Sum_probs=38.5
Q ss_pred cccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcc
Q 006466 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHI 152 (644)
Q Consensus 105 ~~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~ 152 (644)
...+||+|||||++||++|+.|++. |.+|+|+|+.+.+|+.+
T Consensus 31 ~~~~~v~IiGaG~~Gl~aA~~l~~~------g~~v~vlE~~~~~gg~~ 72 (498)
T 2iid_A 31 SNPKHVVIVGAGMAGLSAAYVLAGA------GHQVTVLEASERPGGRV 72 (498)
T ss_dssp SSCCEEEEECCBHHHHHHHHHHHHH------TCEEEEECSSSSSBTTC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhC------CCeEEEEECCCCCCCce
Confidence 3468999999999999999999999 99999999999988865
No 273
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.77 E-value=1.9e-05 Score=86.62 Aligned_cols=43 Identities=37% Similarity=0.540 Sum_probs=38.7
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCC-CeEEEEcCCCCCCCcccc
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVD-LSVCVVEKGAEVGAHIIS 154 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G-~~V~viEk~~~~g~~~~~ 154 (644)
+.+||+|||||++||++|+.|++. | .+|+|+|+.+.+|+.+.+
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~------g~~~v~v~E~~~~~GG~~~~ 51 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTEL------GYKNWHLYECNDTPGGLSRS 51 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHT------TCCSEEEEESSSSSSGGGCE
T ss_pred cCCCEEEECcCHHHHHHHHHHHHc------CCCCEEEEeCCCCCCCeeee
Confidence 468999999999999999999998 8 799999999999886543
No 274
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.76 E-value=0.00014 Score=80.39 Aligned_cols=102 Identities=19% Similarity=0.233 Sum_probs=72.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcEE
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKFW 187 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 187 (644)
-.|+|||||..|+.+|..|++. |.+|+|+++...+.. +
T Consensus 211 ~~vvVIGgG~ig~E~A~~l~~~------G~~Vtlv~~~~~l~~-------~----------------------------- 248 (519)
T 3qfa_A 211 GKTLVVGASYVALECAGFLAGI------GLDVTVMVRSILLRG-------F----------------------------- 248 (519)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT------TCCEEEEESSCSSTT-------S-----------------------------
T ss_pred CeEEEECCcHHHHHHHHHHHHc------CCeEEEEeccccccc-------C-----------------------------
Confidence 4699999999999999999999 999999998522111 0
Q ss_pred EeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCC---CcEEEEEeCcCccccCCCccc
Q 006466 188 FLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDAD---NKVIGIGTNDMGIAKDGSKKE 264 (644)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~---g~v~gV~~~d~g~~~~G~~~~ 264 (644)
-..+.+.+.+.+++.||++++++.++++...++ +.+ .|.+.+ .+|..
T Consensus 249 -----------------------d~~~~~~~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~-~v~~~~----~~g~~-- 298 (519)
T 3qfa_A 249 -----------------------DQDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRL-RVVAQS----TNSEE-- 298 (519)
T ss_dssp -----------------------CHHHHHHHHHHHHHTTCEEEESEEEEEEEEEECCTTCEE-EEEEEE----SSSSC--
T ss_pred -----------------------CHHHHHHHHHHHHHCCCEEEeCCeEEEEEEccCCCCceE-EEEEEE----CCCcE--
Confidence 023456677788889999999998888876432 322 333321 12210
Q ss_pred ccccceEEEcCEEEEecCCCC
Q 006466 265 NFQRGVELRGRITLLAEGCRG 285 (644)
Q Consensus 265 ~~~~g~~i~a~~vV~A~G~~s 285 (644)
..++.+|.||.|+|.++
T Consensus 299 ----~~~~~~D~vi~a~G~~p 315 (519)
T 3qfa_A 299 ----IIEGEYNTVMLAIGRDA 315 (519)
T ss_dssp ----EEEEEESEEEECSCEEE
T ss_pred ----EEEEECCEEEEecCCcc
Confidence 13678999999999765
No 275
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.72 E-value=0.00017 Score=78.27 Aligned_cols=38 Identities=16% Similarity=0.323 Sum_probs=33.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCC
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEV 148 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~ 148 (644)
..+|+|||||..|+.+|..|++. .++.+|+++++.+.+
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~----~~~~~Vt~v~r~~~~ 264 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDS----YPSVQADMILRASAL 264 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH----CTTEEEEEECSSSSC
T ss_pred CCeEEEECCCHhHHHHHHHHHhc----CCCCeEEEEEeCCCC
Confidence 46899999999999999999987 457899999998764
No 276
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.71 E-value=0.00011 Score=79.88 Aligned_cols=104 Identities=22% Similarity=0.244 Sum_probs=73.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcE
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (644)
...|+|||||+.|+.+|..|++. |.+|+++++.+.+.... ++
T Consensus 172 ~~~vvViGgG~~g~e~A~~l~~~------g~~Vtlv~~~~~~l~~~-----~d--------------------------- 213 (466)
T 3l8k_A 172 PQDMVIIGAGYIGLEIASIFRLM------GVQTHIIEMLDRALITL-----ED--------------------------- 213 (466)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSCTTS-----CC---------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHc------CCEEEEEEeCCcCCCCC-----CC---------------------------
Confidence 35799999999999999999999 99999999987543200 00
Q ss_pred EEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCccccc
Q 006466 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (644)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~ 266 (644)
..+.+.+.+.++ |+++++++|+++..++++.+ .|.+.+ .+|+
T Consensus 214 -------------------------~~~~~~l~~~l~---v~i~~~~~v~~i~~~~~~~v-~v~~~~----~~G~----- 255 (466)
T 3l8k_A 214 -------------------------QDIVNTLLSILK---LNIKFNSPVTEVKKIKDDEY-EVIYST----KDGS----- 255 (466)
T ss_dssp -------------------------HHHHHHHHHHHC---CCEECSCCEEEEEEEETTEE-EEEECC----TTSC-----
T ss_pred -------------------------HHHHHHHHhcCE---EEEEECCEEEEEEEcCCCcE-EEEEEe----cCCc-----
Confidence 122344444333 99999999999987652334 366542 1232
Q ss_pred ccceEEEcCEEEEecCCCCcch
Q 006466 267 QRGVELRGRITLLAEGCRGSLS 288 (644)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~l~ 288 (644)
..++.+|.||.|+|.++...
T Consensus 256 --~~~i~~D~vi~a~G~~p~~~ 275 (466)
T 3l8k_A 256 --KKSIFTNSVVLAAGRRPVIP 275 (466)
T ss_dssp --CEEEEESCEEECCCEEECCC
T ss_pred --eEEEEcCEEEECcCCCcccc
Confidence 24799999999999887543
No 277
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.71 E-value=5e-05 Score=78.68 Aligned_cols=97 Identities=19% Similarity=0.261 Sum_probs=69.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcE
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (644)
...|+|||+|+.|+.+|..|++. |.+|+++++.+.+...
T Consensus 155 ~~~v~ViG~G~~g~e~a~~l~~~------g~~V~l~~~~~~~~~~----------------------------------- 193 (335)
T 2a87_A 155 DQDIAVIGGGDSAMEEATFLTRF------ARSVTLVHRRDEFRAS----------------------------------- 193 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTT------CSEEEEECSSSSCSSC-----------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHh------CCeEEEEEcCCcCCcc-----------------------------------
Confidence 45799999999999999999998 9999999987643210
Q ss_pred EEeccCCccccCCCCCCCCcEEEcHHHHHHHHH-HHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccc
Q 006466 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLG-GKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKEN 265 (644)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~-~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~ 265 (644)
+.+. +..++.||+++++++++++..++ .+.+|.+.+. .+|+
T Consensus 194 -----------------------------~~~~~~~~~~~gV~v~~~~~v~~i~~~~--~~~~v~~~~~---~~g~---- 235 (335)
T 2a87_A 194 -----------------------------KIMLDRARNNDKIRFLTNHTVVAVDGDT--TVTGLRVRDT---NTGA---- 235 (335)
T ss_dssp -----------------------------TTHHHHHHHCTTEEEECSEEEEEEECSS--SCCEEEEEEE---TTSC----
T ss_pred -----------------------------HHHHHHHhccCCcEEEeCceeEEEecCC--cEeEEEEEEc---CCCc----
Confidence 0022 22246799999999999997654 3334555420 1232
Q ss_pred cccceEEEcCEEEEecCCCC
Q 006466 266 FQRGVELRGRITLLAEGCRG 285 (644)
Q Consensus 266 ~~~g~~i~a~~vV~A~G~~s 285 (644)
+.++.+|.||.|+|..+
T Consensus 236 ---~~~i~~D~vi~a~G~~p 252 (335)
T 2a87_A 236 ---ETTLPVTGVFVAIGHEP 252 (335)
T ss_dssp ---CEEECCSCEEECSCEEE
T ss_pred ---eEEeecCEEEEccCCcc
Confidence 36799999999999654
No 278
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.71 E-value=0.00022 Score=80.19 Aligned_cols=100 Identities=21% Similarity=0.187 Sum_probs=69.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcEE
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKFW 187 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 187 (644)
-.|+|||||..|+.+|..|++. |.+|+|+++. .+... ++
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~~------g~~Vtlv~~~-~~l~~------~d---------------------------- 325 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLASL------GGDVTVMVRS-ILLRG------FD---------------------------- 325 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT------TCCEEEEESS-CSSTT------SC----------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHc------CCEEEEEECC-cCcCc------CC----------------------------
Confidence 3799999999999999999999 9999999987 22110 00
Q ss_pred EeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEc-----CC---CcEEEEE--eCcCccc
Q 006466 188 FLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYD-----AD---NKVIGIG--TNDMGIA 257 (644)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~-----~~---g~v~gV~--~~d~g~~ 257 (644)
..+.+.+.+.+++.||++++++.++++... ++ +.+ .|. ..+
T Consensus 326 ------------------------~~~~~~~~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~-~v~~~~~~---- 376 (598)
T 2x8g_A 326 ------------------------QQMAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLL-LVKGHYTD---- 376 (598)
T ss_dssp ------------------------HHHHHHHHHHHHHTTCEEEETEEEEEEEEEECCBTTTTBCCEE-EEEEEETT----
T ss_pred ------------------------HHHHHHHHHHHHhCCCEEEECCeEEEEEeccccccccCCCceE-EEEEEeCC----
Confidence 123455667778889999999988888542 21 333 232 222
Q ss_pred cCCCcccccccceEEEcCEEEEecCCCCc
Q 006466 258 KDGSKKENFQRGVELRGRITLLAEGCRGS 286 (644)
Q Consensus 258 ~~G~~~~~~~~g~~i~a~~vV~A~G~~s~ 286 (644)
|+ ..++.+|.||.|+|..+.
T Consensus 377 --g~-------~~~~~~D~vi~a~G~~p~ 396 (598)
T 2x8g_A 377 --GK-------KFEEEFETVIFAVGREPQ 396 (598)
T ss_dssp --SC-------EEEEEESEEEECSCEEEC
T ss_pred --Cc-------EEeccCCEEEEEeCCccc
Confidence 21 123459999999997654
No 279
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.71 E-value=0.00013 Score=87.06 Aligned_cols=110 Identities=16% Similarity=0.180 Sum_probs=75.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCC-eEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcE
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~-~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (644)
-+|+|||||..|+.+|..|++. |. +|+|+++.+..- ++..
T Consensus 333 ~~VvVIGgG~~g~e~A~~~~~~------G~~~Vtvv~r~~~~~-----------------~~~~---------------- 373 (1025)
T 1gte_A 333 GAVIVLGAGDTAFDCATSALRC------GARRVFLVFRKGFVN-----------------IRAV---------------- 373 (1025)
T ss_dssp SEEEEECSSHHHHHHHHHHHHT------TCSEEEEECSSCGGG-----------------CCSC----------------
T ss_pred CcEEEECCChHHHHHHHHHHHc------CCCEEEEEEecChhh-----------------CCCC----------------
Confidence 3799999999999999999999 86 899999876210 0000
Q ss_pred EEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCccccc
Q 006466 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (644)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~ 266 (644)
.. ..+.+++.||++++++.++++..+ ++.|.+|++.++..+.+|.....-
T Consensus 374 ------------------------~~-----e~~~~~~~Gv~~~~~~~~~~i~~~-~g~v~~v~~~~~~~~~~g~~~~~~ 423 (1025)
T 1gte_A 374 ------------------------PE-----EVELAKEEKCEFLPFLSPRKVIVK-GGRIVAVQFVRTEQDETGKWNEDE 423 (1025)
T ss_dssp ------------------------HH-----HHHHHHHTTCEEECSEEEEEEEEE-TTEEEEEEEEEEEECTTSCEEEEE
T ss_pred ------------------------HH-----HHHHHHHcCCEEEeCCCceEEEcc-CCeEEEEEEEEeEEcCCCCcccCC
Confidence 00 113456789999999999999764 467877876543333344311100
Q ss_pred ccceEEEcCEEEEecCCCCc
Q 006466 267 QRGVELRGRITLLAEGCRGS 286 (644)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~ 286 (644)
....++.+|.||.|.|..+.
T Consensus 424 g~~~~i~aD~Vi~A~G~~~~ 443 (1025)
T 1gte_A 424 DQIVHLKADVVISAFGSVLR 443 (1025)
T ss_dssp EEEEEEECSEEEECSCEECC
T ss_pred CceEEEECCEEEECCCCCCC
Confidence 11247999999999998654
No 280
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.65 E-value=5.8e-05 Score=81.95 Aligned_cols=110 Identities=19% Similarity=0.221 Sum_probs=72.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCC-eEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCc
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDK 185 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~-~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~ 185 (644)
..+|+|||||..|+-+|..+.+. |. +|+++++++...-
T Consensus 264 gk~VvVIGgG~~a~d~A~~~~r~------Ga~~Vtiv~r~~~~~~----------------------------------- 302 (456)
T 2vdc_G 264 GKHVVVLGGGDTAMDCVRTAIRQ------GATSVKCLYRRDRKNM----------------------------------- 302 (456)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHT------TCSEEEEECSSCSTTC-----------------------------------
T ss_pred CCEEEEECCChhHHHHHHHHHHc------CCCEEEEEEeCCccCC-----------------------------------
Confidence 45799999999999999999998 87 5999998764310
Q ss_pred EEEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCc---cccCCCc
Q 006466 186 FWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMG---IAKDGSK 262 (644)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g---~~~~G~~ 262 (644)
|.. .. -.+.+++.||++++++.++++.. +|.|.+|++.++. .+.+|..
T Consensus 303 ------------p~~----------~~-----e~~~~~~~Gv~~~~~~~~~~i~~--~g~v~~v~~~~~~~~~~d~~G~~ 353 (456)
T 2vdc_G 303 ------------PGS----------QR-----EVAHAEEEGVEFIWQAAPEGFTG--DTVVTGVRAVRIHLGVADATGRQ 353 (456)
T ss_dssp ------------SSC----------HH-----HHHHHHHTTCEEECCSSSCCEEE--EEEEETTEEEEEEEEEEEECTTC
T ss_pred ------------CCC----------HH-----HHHHHHHCCCEEEeCCCceEEeC--CCcEEEEEEEEEEecccCCcCCc
Confidence 000 00 12345678999999999988874 2555444443211 1133432
Q ss_pred ccccccc--eEEEcCEEEEecCCCCc
Q 006466 263 KENFQRG--VELRGRITLLAEGCRGS 286 (644)
Q Consensus 263 ~~~~~~g--~~i~a~~vV~A~G~~s~ 286 (644)
.....+| .++.+|.||.|.|..+.
T Consensus 354 ~~~~~~g~~~~i~aD~Vi~A~G~~p~ 379 (456)
T 2vdc_G 354 TPQVIEGSEFTVQADLVIKALGFEPE 379 (456)
T ss_dssp CEEEEEEEEEEEECSEEEECSCEECC
T ss_pred cccccCCcEEEEECCEEEECCCCCCC
Confidence 2111123 57999999999997654
No 281
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.64 E-value=0.00021 Score=77.55 Aligned_cols=148 Identities=19% Similarity=0.203 Sum_probs=81.8
Q ss_pred cccEEEECCCHHHHHHHHHHH--------------------hhchhcCCCC-eEEEEcCCCCCCCcccccCccChHHHHH
Q 006466 107 AYDVVIVGAGPAGLSAAIRLK--------------------QLCREKNVDL-SVCVVEKGAEVGAHIISGNVFEPRALNE 165 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La--------------------~~~~~~~~G~-~V~viEk~~~~g~~~~~g~~i~~~~l~~ 165 (644)
...|+|||+|..|+.+|..|+ +. |. +|+|++++..+. ..+.+..+.+
T Consensus 145 ~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~------g~~~V~lv~r~~~~~------~~ft~~el~~ 212 (460)
T 1cjc_A 145 CDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQS------RVKTVWIVGRRGPLQ------VAFTIKELRE 212 (460)
T ss_dssp SSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTC------CCCEEEEECSSCGGG------CCCCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhC------CCcEEEEEEcCChHh------hccCHHHHHH
Confidence 357999999999999999999 44 77 799999986432 1233344433
Q ss_pred H--hhhhhhcCCCeeeeccCCcEEEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHh--------------cCCEE
Q 006466 166 L--LPQWKQEEAPIRVPVSSDKFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEE--------------LGVEI 229 (644)
Q Consensus 166 l--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~--------------~Gv~i 229 (644)
+ ++... ..+....+. ......+. ..-.+..+.+.|.+.+++ .||++
T Consensus 213 l~~lp~~~-------~~~~~~~~~----~~~~~~~~-------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~gv~~ 274 (460)
T 1cjc_A 213 MIQLPGTR-------PMLDPADFL----GLQDRIKE-------AARPRKRLMELLLRTATEKPGVEEAARRASASRAWGL 274 (460)
T ss_dssp HHTCTTEE-------EECCGGGGT----THHHHTTT-------SCHHHHHHHHHHHHHHHSCCCHHHHHHHHTCSEEEEE
T ss_pred hhcCCCce-------eEechhhhc----chhhhhhh-------ccHHHHHHHHHHHHHHHhccccccccCCCCCCceEEE
Confidence 3 11100 000000000 00000000 000123345666666655 78999
Q ss_pred ecCceEEEEEEcCCC-cEEEEEeCcCccccC-CCcccccccc--eEEEcCEEEEecCCCC
Q 006466 230 YPGFAASEILYDADN-KVIGIGTNDMGIAKD-GSKKENFQRG--VELRGRITLLAEGCRG 285 (644)
Q Consensus 230 ~~g~~v~~v~~~~~g-~v~gV~~~d~g~~~~-G~~~~~~~~g--~~i~a~~vV~A~G~~s 285 (644)
++++.++++..++++ .+.+|++.++..+.+ |.. .....| .++.+|.||.|.|.++
T Consensus 275 ~~~~~~~~i~~~~~~~~v~~v~~~~~~l~~~~~~~-~~~~~g~~~~i~~d~Vi~a~G~~p 333 (460)
T 1cjc_A 275 RFFRSPQQVLPSPDGRRAAGIRLAVTRLEGIGEAT-RAVPTGDVEDLPCGLVLSSIGYKS 333 (460)
T ss_dssp ECSEEEEEEEECTTSSSEEEEEEEEEEEESSGGGC-EEEEEEEEEEEECSEEEECCCEEC
T ss_pred ECCCChheEEcCCCCceEEEEEEEEEEEccccCCC-cccCCCceEEEEcCEEEECCCCCC
Confidence 999999999876445 676776643111000 000 000012 6799999999999665
No 282
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.62 E-value=5.5e-05 Score=79.13 Aligned_cols=36 Identities=36% Similarity=0.352 Sum_probs=33.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCC
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVG 149 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g 149 (644)
+||+|||||+||+.||+.|++. |++|+|+|+++..+
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~------G~~V~liE~~~~~~ 37 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRL------GVPVRLFEMRPKRM 37 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT------TCCEEEECCTTTSC
T ss_pred CCEEEECchHHHHHHHHHHHHC------CCcEEEEeccCCcC
Confidence 6999999999999999999999 99999999987543
No 283
>2fgo_A Ferredoxin; allochromatium vinosum, [4Fe-4S] cluster, reduction potential, iron binding protein electron transport; 1.32A {Pseudomonas aeruginosa}
Probab=97.61 E-value=2.6e-05 Score=63.16 Aligned_cols=57 Identities=14% Similarity=0.135 Sum_probs=46.6
Q ss_pred cCCCCccccCCCCCCCCcceeeCCeeEEEecCCCCceeEEEecCCcccCCC---CcceeeeCCCCCceeeC
Q 006466 565 RDPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQINAQNCLHCKD---FQACDIKDPKQNIKWTV 632 (644)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~cpa~~y~~~~~~~~~~~~~~~~~~c~~c~~---~~~c~~~~p~~~i~w~~ 632 (644)
.|.+.|..|. .|+.+||.+++.+.++ .+.||.+.|+.|+. -+.|...||+++|++..
T Consensus 3 ~~~~~C~~C~------~C~~~CP~~ai~~~~~-----~~~~~~~~C~~C~~~~~~~~C~~~CP~~Ai~~~~ 62 (82)
T 2fgo_A 3 KITDDCINCD------VCEPECPNGAISQGEE-----IYVIDPNLCTECVGHYDEPQCQQVCPVDCIPLDD 62 (82)
T ss_dssp CCCTTCCCCC------TTGGGCTTCCEEECSS-----SEEECTTTCCTTTTTCSSCHHHHHCTTCCCCBCT
T ss_pred eeCCCCCChh------hHHHHCChhccCCCCC-----eEEEEchhCccCCCcCCCCHhHhhCCcccEEccC
Confidence 4677898886 7999999999997643 57899999999961 12799999999999853
No 284
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.59 E-value=4.4e-05 Score=83.21 Aligned_cols=40 Identities=33% Similarity=0.601 Sum_probs=36.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCC-eEEEEcCCCCCCCcc
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGAEVGAHI 152 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~-~V~viEk~~~~g~~~ 152 (644)
.+||+|||||++||++|+.|++. |. +|+|+|+++.+|+.+
T Consensus 4 ~~~~~iiG~G~~g~~~a~~l~~~------g~~~v~~~e~~~~~gg~~ 44 (472)
T 1b37_A 4 GPRVIVVGAGMSGISAAKRLSEA------GITDLLILEATDHIGGRM 44 (472)
T ss_dssp -CCEEEECCBHHHHHHHHHHHHT------TCCCEEEECSSSSSBTTS
T ss_pred CCeEEEECCCHHHHHHHHHHHhc------CCCceEEEeCCCCCCCce
Confidence 57999999999999999999999 98 899999999888764
No 285
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=97.57 E-value=0.00012 Score=73.80 Aligned_cols=87 Identities=14% Similarity=0.057 Sum_probs=67.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcE
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (644)
...|+|||+|+.|+.+|..|++. | +|+++++.+..-
T Consensus 141 ~~~v~vvG~G~~~~e~a~~l~~~------g-~v~~v~~~~~~~------------------------------------- 176 (297)
T 3fbs_A 141 QGKIGVIAASPMAIHHALMLPDW------G-ETTFFTNGIVEP------------------------------------- 176 (297)
T ss_dssp TCEEEEECCSTTHHHHHHHGGGT------S-EEEEECTTTCCC-------------------------------------
T ss_pred CCEEEEEecCccHHHHHHHhhhc------C-cEEEEECCCCCC-------------------------------------
Confidence 45799999999999999999998 8 999998765300
Q ss_pred EEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCccccc
Q 006466 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (644)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~ 266 (644)
.+.+.+.+++.||+++. ++++++..+ + .|.+.+
T Consensus 177 ----------------------------~~~~~~~l~~~gv~i~~-~~v~~i~~~--~---~v~~~~------------- 209 (297)
T 3fbs_A 177 ----------------------------DADQHALLAARGVRVET-TRIREIAGH--A---DVVLAD------------- 209 (297)
T ss_dssp ----------------------------CHHHHHHHHHTTCEEEC-SCEEEEETT--E---EEEETT-------------
T ss_pred ----------------------------CHHHHHHHHHCCcEEEc-ceeeeeecC--C---eEEeCC-------------
Confidence 11245566778999985 889888643 2 466665
Q ss_pred ccceEEEcCEEEEecCCCCc
Q 006466 267 QRGVELRGRITLLAEGCRGS 286 (644)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~ 286 (644)
|.++.+|.||.|+|..+.
T Consensus 210 --g~~~~~D~vi~a~G~~p~ 227 (297)
T 3fbs_A 210 --GRSIALAGLFTQPKLRIT 227 (297)
T ss_dssp --SCEEEESEEEECCEEECC
T ss_pred --CCEEEEEEEEEccCcccC
Confidence 678999999999997653
No 286
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.56 E-value=0.00037 Score=71.07 Aligned_cols=99 Identities=14% Similarity=0.112 Sum_probs=69.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcE
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (644)
...|+|||||..|+.+|..|++. |.+|+|+|+.......
T Consensus 152 ~~~vvViGgG~ig~e~A~~l~~~------G~~Vt~v~~~~~~~~~----------------------------------- 190 (314)
T 4a5l_A 152 NKVLMVVGGGDAAMEEALHLTKY------GSKVIILHRRDAFRAS----------------------------------- 190 (314)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTT------SSEEEEECSSSSCCSC-----------------------------------
T ss_pred CCeEEEECCChHHHHHHHHHHHh------CCeeeeeccccccccc-----------------------------------
Confidence 35799999999999999999999 9999999987643210
Q ss_pred EEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCccccc
Q 006466 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (644)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~ 266 (644)
.....+.....+++.+....+.++...+ ....++...+. ..
T Consensus 191 ----------------------------~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~---~~------- 231 (314)
T 4a5l_A 191 ----------------------------KTMQERVLNHPKIEVIWNSELVELEGDG-DLLNGAKIHNL---VS------- 231 (314)
T ss_dssp ----------------------------HHHHHHHHTCTTEEEECSEEEEEEEESS-SSEEEEEEEET---TT-------
T ss_pred ----------------------------chhhhhhhcccceeeEeeeeeEEEEeee-eccceeEEeec---cc-------
Confidence 1112223344567888888888887655 34445555431 11
Q ss_pred ccceEEEcCEEEEecCCCC
Q 006466 267 QRGVELRGRITLLAEGCRG 285 (644)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s 285 (644)
.++.++.+|.||.|.|..+
T Consensus 232 ~~~~~i~~d~vi~a~G~~p 250 (314)
T 4a5l_A 232 GEYKVVPVAGLFYAIGHSP 250 (314)
T ss_dssp CCEEEEECSEEEECSCEEE
T ss_pred ccceeeccccceEeccccc
Confidence 2257899999999999655
No 287
>1rgv_A Ferredoxin; electron transport; 2.90A {Thauera aromatica} SCOP: d.58.1.1
Probab=97.55 E-value=2.5e-05 Score=62.96 Aligned_cols=56 Identities=16% Similarity=0.183 Sum_probs=45.8
Q ss_pred cCCCCccccCCCCCCCCcceeeCCeeEEEecCCCCceeEEEecCCcccCC---CCcceeeeCCCCCceee
Q 006466 565 RDPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQINAQNCLHCK---DFQACDIKDPKQNIKWT 631 (644)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~cpa~~y~~~~~~~~~~~~~~~~~~c~~c~---~~~~c~~~~p~~~i~w~ 631 (644)
.|.+.|..|. .|...||.+++.+.++ .+.||.+.|+.|+ +-..|...||+++|++.
T Consensus 3 ~~~~~C~~C~------~C~~~CP~~ai~~~~~-----~~~~~~~~C~~C~~~~~~~~C~~~CP~~Ai~~~ 61 (80)
T 1rgv_A 3 YINDDCTACD------ACVEECPNEAITPGDP-----IYVIDPTKCSECVGAFDEPQCRLVCPADCIPDN 61 (80)
T ss_dssp CCCSCCCCCC------TTTTTCTTCCEECCSS-----SCEECTTTCCTTTTTCSSCHHHHHCSSCCCCBC
T ss_pred EeCCCCcChh------hHHHHcChhccCcCCC-----eeEEcchhCcCCCCcCCccHHHHhcCcccEEec
Confidence 4667898876 7999999999987543 5789999999997 11269999999999875
No 288
>3gyx_B Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=97.55 E-value=2.8e-05 Score=72.14 Aligned_cols=61 Identities=20% Similarity=0.288 Sum_probs=48.1
Q ss_pred CCCCccccCCCCCCCCcceeeCCeeEEEecCCCCceeEEEecCCcccCCCCcceeeeCCCCCceeeC
Q 006466 566 DPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQINAQNCLHCKDFQACDIKDPKQNIKWTV 632 (644)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~cpa~~y~~~~~~~~~~~~~~~~~~c~~c~~~~~c~~~~p~~~i~w~~ 632 (644)
|++.|+.|..-. ...|+.+||.+++.+.++. ...+.+|.+.|+.|| .|...||+++|++..
T Consensus 5 d~~~C~gC~~c~-~~~C~~~CP~~ai~~~~~~--~~~~~~d~~~C~~Cg---~Cv~~CP~~Ai~~~~ 65 (166)
T 3gyx_B 5 DPSKCDGCKGGE-KTACMYICPNDLMILDPEE--MKAFNQEPEACWECY---SCIKICPQGAITARP 65 (166)
T ss_dssp CTTTCCCCCSSS-CCHHHHHCTTSCEEEETTT--TEEEESCGGGCCCCC---HHHHHCSSCCEEECC
T ss_pred cchhcCCCCCCC-cchhHHhCCccccEEecCC--ceeEecCcccCcccC---hHhHhCCccceEEec
Confidence 778898874111 3479999999999987542 225679999999999 999999999997653
No 289
>3i9v_9 NADH-quinone oxidoreductase subunit 9; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_8* 2fug_9* 3iam_9* 3ias_9* 3m9s_9*
Probab=97.51 E-value=2.3e-05 Score=73.81 Aligned_cols=58 Identities=21% Similarity=0.260 Sum_probs=46.3
Q ss_pred CCCCccccCCCCCCCCcceeeCCeeEEEecCCC-----------CceeEEEecCCcccCCCCcceeeeCCCCCceeeC
Q 006466 566 DPKIPELVNLPEYAGPESRYCPARVYEYVPDEK-----------NQLKLQINAQNCLHCKDFQACDIKDPKQNIKWTV 632 (644)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~cpa~~y~~~~~~~-----------~~~~~~~~~~~c~~c~~~~~c~~~~p~~~i~w~~ 632 (644)
|.+.|+.|. .|+.+||.+++.+..+.. ....+.++...|+.|| .|...||+++|.+..
T Consensus 49 d~~~Ci~C~------~C~~~CP~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~---~C~~~CP~~Ai~~~~ 117 (182)
T 3i9v_9 49 GLEKCIGCS------LCAAACPAYAIYVEPAENDPENPVSAGERYAKVYEINMLRCIFCG---LCEEACPTGAIVLGY 117 (182)
T ss_dssp SCBSCCCCC------HHHHHCTTCCEEEEEECCCSSSCSSSSSCEEEEEEEETTTCCCCC---HHHHHCSSSCEEECS
T ss_pred CCccCcccc------cchhhCCcccEEeecccccccccccccccccceeecCCCcCcChh---ChhhhCCccceEecC
Confidence 467898887 799999999997754321 0124689999999999 999999999998863
No 290
>2vpz_B NRFC protein; oxidoreductase, molybdopterin guanine dinucleotide, iron-sulfur, metal-binding, molybdopterin; HET: MGD; 2.40A {Thermus thermophilus} PDB: 2vpx_B* 2vpw_B* 2vpy_B*
Probab=97.48 E-value=3e-05 Score=74.03 Aligned_cols=57 Identities=18% Similarity=0.300 Sum_probs=48.5
Q ss_pred CCCCccccCCCCCCCCcceeeCCeeEEEecCCCCceeEEEecCCcccCCCCcceeeeCCCCCceeeCC
Q 006466 566 DPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQINAQNCLHCKDFQACDIKDPKQNIKWTVP 633 (644)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~cpa~~y~~~~~~~~~~~~~~~~~~c~~c~~~~~c~~~~p~~~i~w~~p 633 (644)
++..|..|. ..+|+.+||.+++...++ + .+.||.+.|+.|+ .|...||+++|.|...
T Consensus 54 ~~~~C~~C~----~p~C~~~CP~gAi~~~~~--g--~~~id~~~CigC~---~C~~~CP~~Ai~~~~~ 110 (195)
T 2vpz_B 54 RPEQCLHCE----NPPCVPVCPTGASYQTKD--G--LVLVDPKKCIACG---ACIAACPYDARYLHPA 110 (195)
T ss_dssp EEEECCCCS----SCTTTTTCSSSCEEECTT--S--CEEECTTTCCCCC---HHHHHCTTCCCEECTT
T ss_pred CcccCcCcc----CcHHHHhcCCCceecccc--c--ceeecCCCCCCcC---hhHhhCCCCCeEECCC
Confidence 567788886 557999999999987533 2 6899999999999 9999999999998754
No 291
>1jnr_B Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.1.5 PDB: 1jnz_B* 2fja_B* 2fjb_B* 2fjd_B* 2fje_B*
Probab=97.45 E-value=3.9e-05 Score=69.89 Aligned_cols=60 Identities=15% Similarity=0.260 Sum_probs=47.1
Q ss_pred CCCCccccCCCCCCCCcceeeCCeeEEEecCCCCceeEEEecCCcccCCCCcceeeeCCCCCceee
Q 006466 566 DPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQINAQNCLHCKDFQACDIKDPKQNIKWT 631 (644)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~cpa~~y~~~~~~~~~~~~~~~~~~c~~c~~~~~c~~~~p~~~i~w~ 631 (644)
|.+.|..|.... ...|+.+||.+++.+.++. ...+.||.+.|+.|| .|...||+++|++.
T Consensus 6 d~~~C~~C~~~~-~~~C~~~CP~~ai~~~~~~--~~~~~id~~~C~~Cg---~Cv~~CP~~AI~~~ 65 (150)
T 1jnr_B 6 NPEKCDGCKALE-RTACEYICPNDLMTLDKEK--MKAYNREPDMCWECY---SCVKMCPQGAIDVR 65 (150)
T ss_dssp CTTTCCSCCSSS-SCHHHHHCTTSCEEEETTT--TEEEESCGGGCCCCC---HHHHHCTTCCEEEC
T ss_pred CcccCCCCCCcc-cccchhhcCccCeEEecCC--ceeeeeCcccCcCHh---HHHHhCCccceEec
Confidence 778898874111 2369999999999986542 224689999999999 99999999999765
No 292
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.45 E-value=0.00019 Score=85.11 Aligned_cols=97 Identities=13% Similarity=0.200 Sum_probs=73.7
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcEE
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKFW 187 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 187 (644)
..|+|||+|+.|+.+|..|++. |.+|+|+|+.+.+..
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~------G~~Vtvv~~~~~~~~------------------------------------- 321 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAAT------GGVVAVIDARSSISA------------------------------------- 321 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGG------TCCSEEEESCSSCCH-------------------------------------
T ss_pred CeEEEEcCCHHHHHHHHHHHHc------CCcEEEEECCCccch-------------------------------------
Confidence 4799999999999999999999 999999999864310
Q ss_pred EeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCcccc---CCCccc
Q 006466 188 FLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAK---DGSKKE 264 (644)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~---~G~~~~ 264 (644)
. .+.+++.||+|++++.++++..++++.+.+|++.++ +. +|+
T Consensus 322 -------------------------~-----~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~--~~~~~~G~--- 366 (965)
T 2gag_A 322 -------------------------A-----AAQAVADGVQVISGSVVVDTEADENGELSAIVVAEL--DEARELGG--- 366 (965)
T ss_dssp -------------------------H-----HHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEEEE--CTTCCEEE---
T ss_pred -------------------------h-----HHHHHhCCeEEEeCCEeEEEeccCCCCEEEEEEEec--cccCCCCc---
Confidence 0 234567899999999999998642355667776531 00 111
Q ss_pred ccccceEEEcCEEEEecCCCCc
Q 006466 265 NFQRGVELRGRITLLAEGCRGS 286 (644)
Q Consensus 265 ~~~~g~~i~a~~vV~A~G~~s~ 286 (644)
+.++.+|.||.|.|..+.
T Consensus 367 ----~~~i~~D~Vv~a~G~~P~ 384 (965)
T 2gag_A 367 ----TQRFEADVLAVAGGFNPV 384 (965)
T ss_dssp ----EEEEECSEEEEECCEEEC
T ss_pred ----eEEEEcCEEEECCCcCcC
Confidence 267999999999998775
No 293
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.40 E-value=0.00011 Score=83.67 Aligned_cols=40 Identities=33% Similarity=0.580 Sum_probs=37.0
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCc
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAH 151 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~ 151 (644)
..+||+|||||++||++|+.|++. |++|+|+|+.+.+|+.
T Consensus 106 ~~~~v~viG~G~~gl~~a~~l~~~------g~~v~~~e~~~~~gg~ 145 (662)
T 2z3y_A 106 KTGKVIIIGSGVSGLAAARQLQSF------GMDVTLLEARDRVGGR 145 (662)
T ss_dssp CCCEEEEECCBHHHHHHHHHHHHT------TCEEEEECSSSSSBTT
T ss_pred CCCeEEEECcCHHHHHHHHHHHHC------CCeEEEEecCCCCCCc
Confidence 357999999999999999999999 9999999999888774
No 294
>1rof_A Ferredoxin; electron transport, iron-sulfur; NMR {Thermotoga maritima} SCOP: d.58.1.4 PDB: 1vjw_A
Probab=97.37 E-value=2e-05 Score=59.41 Aligned_cols=56 Identities=16% Similarity=0.181 Sum_probs=41.8
Q ss_pred EEecCCCCccccCCCCCCCCcceeeCCeeEEEecCCCCceeEEE-ecCCcccCCCCcceeeeCCCCCceee
Q 006466 562 LRLRDPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQI-NAQNCLHCKDFQACDIKDPKQNIKWT 631 (644)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~cpa~~y~~~~~~~~~~~~~~-~~~~c~~c~~~~~c~~~~p~~~i~w~ 631 (644)
+.+ |++.|+.|. .|+.+||. ++.+.++ +. ...+ +.+.|..|+ .|...||+++|++.
T Consensus 3 ~~i-~~~~C~~C~------~C~~~Cp~-~~~~~~~--~~-~~~~~~~~~c~~C~---~C~~~CP~~Ai~~~ 59 (60)
T 1rof_A 3 VRV-DADACIGCG------VCENLCPD-VFQLGDD--GK-AKVLQPETDLPCAK---DAADSCPTGAISVE 59 (60)
T ss_dssp SEE-CTTTCCSCC------SSTTTCTT-TBCCCSS--SC-CCBSCSSCCSTTHH---HHHHHCTTCCEECC
T ss_pred EEE-chhhCCCCh------HHHHhCcH-HHeECCC--CC-EeecCchhhHHHHH---HHHHhCCHhHEEEe
Confidence 444 778898876 69999997 6665432 21 2233 388999999 99999999999874
No 295
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.35 E-value=0.00015 Score=84.27 Aligned_cols=40 Identities=33% Similarity=0.580 Sum_probs=37.0
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCc
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAH 151 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~ 151 (644)
..+||+|||||++||++|+.|++. |++|+|+|+.+.+|+.
T Consensus 277 ~~~~v~viG~G~aGl~~A~~l~~~------g~~v~v~E~~~~~GG~ 316 (852)
T 2xag_A 277 KTGKVIIIGSGVSGLAAARQLQSF------GMDVTLLEARDRVGGR 316 (852)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSCTT
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC------CCcEEEEEecCcCCCc
Confidence 357999999999999999999999 9999999999988874
No 296
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.34 E-value=0.00013 Score=81.13 Aligned_cols=68 Identities=15% Similarity=0.216 Sum_probs=46.8
Q ss_pred HHHHHHh-cCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccccccceEE---EcCEEEEecCCCCcchHHHHH
Q 006466 218 LGGKAEE-LGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVEL---RGRITLLAEGCRGSLSEKLIK 293 (644)
Q Consensus 218 L~~~a~~-~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~~~g~~i---~a~~vV~A~G~~s~l~~~l~~ 293 (644)
+.+.+.+ .|++|+.++.|++|+.++ +++++|++.+. .+|+. .++ .+|.||+|+|+.. ..+|..
T Consensus 201 ~l~~~~~~~~~~i~~~~~V~~i~~~~-~~~~gV~~~~~---~~g~~-------~~~~v~~~~~VIlaaG~~~--sp~lL~ 267 (546)
T 1kdg_A 201 YLQTALARPNFTFKTNVMVSNVVRNG-SQILGVQTNDP---TLGPN-------GFIPVTPKGRVILSAGAFG--TSRILF 267 (546)
T ss_dssp HHHHHHTCTTEEEECSCCEEEEEEET-TEEEEEEESCT---TSSGG-------GEEEEEEEEEEEECSHHHH--HHHHHH
T ss_pred HHHHHhhCCCcEEEeCCEEEEEEEeC-CEEEEEEEEec---CCCce-------eEEEEEeCCEEEEcCChhc--CHHHHH
Confidence 4445554 589999999999999875 67889998651 12321 223 7899999999865 344544
Q ss_pred HcCCC
Q 006466 294 NFKLR 298 (644)
Q Consensus 294 ~~~~~ 298 (644)
..|+.
T Consensus 268 ~sGig 272 (546)
T 1kdg_A 268 QSGIG 272 (546)
T ss_dssp HTTBS
T ss_pred HcCCC
Confidence 55554
No 297
>1dax_A Ferredoxin I; electron transport, electron-transfer protein, 4Fe-4S cluster; NMR {Desulfovibrio africanus} SCOP: d.58.1.4 PDB: 1dfd_A 1fxr_A
Probab=97.31 E-value=3e-05 Score=59.39 Aligned_cols=54 Identities=13% Similarity=0.150 Sum_probs=42.5
Q ss_pred CCCCccccCCCCCCCCcceeeCCeeEEEecCCCCceeEEEe--cCCcccCCCCcceeeeCCCCCceee
Q 006466 566 DPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQIN--AQNCLHCKDFQACDIKDPKQNIKWT 631 (644)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~cpa~~y~~~~~~~~~~~~~~~--~~~c~~c~~~~~c~~~~p~~~i~w~ 631 (644)
|++.|+.|. -|+.+|| +++++.++ .+. ...++ .+.|..|+ .|...||+++|++.
T Consensus 7 d~~~C~~Cg------~C~~~CP-~~~~~~~~-~~~-~~~~~~~~~~C~~C~---~C~~~CP~~Ai~~~ 62 (64)
T 1dax_A 7 DQDECIACE------SCVEIAP-GAFAMDPE-IEK-AYVKDVEGASQEEVE---EAMDTCPVQCIHWE 62 (64)
T ss_dssp CSTTCCSCC------HHHHHCT-TTEEECSS-SSS-EEECCGGGSCHHHHH---HHHHHSSSCCEECC
T ss_pred ccccCCCch------HHHHhCC-ccEeEcCC-CCE-EEEecCCCcchhHHH---HHHHhCCHhhEeee
Confidence 778899887 7999999 88887543 122 23344 78999999 99999999999874
No 298
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.30 E-value=0.00051 Score=74.50 Aligned_cols=155 Identities=21% Similarity=0.161 Sum_probs=78.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchh--------------cCCC-CeEEEEcCCCCCCCcccccCccChHHHHHHhhhhh
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCRE--------------KNVD-LSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWK 171 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~--------------~~~G-~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~ 171 (644)
...|+|||+|..|+.+|..|++...+ ...| .+|+|++++..+.. .+.+..+.++... .
T Consensus 147 ~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~~~------~f~~~elrel~~l-p 219 (456)
T 1lqt_A 147 GARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPLQA------AFTTLELRELADL-D 219 (456)
T ss_dssp SSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGGGC------CCCHHHHHHGGGC-T
T ss_pred CCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChhhh------ccChHHHHHhhcC-C
Confidence 35799999999999999999873100 0014 49999999864322 1333333333110 0
Q ss_pred hcCCCeeeeccCCcEEEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHh------cCCEEecCceEEEEEEcCCCc
Q 006466 172 QEEAPIRVPVSSDKFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEE------LGVEIYPGFAASEILYDADNK 245 (644)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~------~Gv~i~~g~~v~~v~~~~~g~ 245 (644)
. ....+....+. . ......+ ...-.+..+.+.|.+.+++ .||++++++.++++..+ +.
T Consensus 220 ~----~~~~~~~~~~~--~-~~~~~~~-------~~~~~~~~~~~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~~--~~ 283 (456)
T 1lqt_A 220 G----VDVVIDPAELD--G-ITDEDAA-------AVGKVCKQNIKVLRGYADREPRPGHRRMVFRFLTSPIEIKGK--RK 283 (456)
T ss_dssp T----EEEECCGGGGT--T-CCHHHHH-------HHCHHHHHHHHHHHHHHTCC-CTTSEEEEEECSEEEEEEECS--SS
T ss_pred C----ceeeeChHHhc--c-chhhhhh-------hccHHHHHHHHHHHHHhhcCCCCCCceEEEEeCCCCeEEecC--Cc
Confidence 0 00000000000 0 0000000 0000123345566666666 78999999999998754 44
Q ss_pred EEEEEeCcCccccCCC--cccccccc--eEEEcCEEEEecCCCC
Q 006466 246 VIGIGTNDMGIAKDGS--KKENFQRG--VELRGRITLLAEGCRG 285 (644)
Q Consensus 246 v~gV~~~d~g~~~~G~--~~~~~~~g--~~i~a~~vV~A~G~~s 285 (644)
+.+|++.+...+.+|. .. .-.+| .++.+|.||.|.|.++
T Consensus 284 v~~v~~~~~~~~~~~~~~~~-~~~~g~~~~i~~d~vi~a~G~~p 326 (456)
T 1lqt_A 284 VERIVLGRNELVSDGSGRVA-AKDTGEREELPAQLVVRSVGYRG 326 (456)
T ss_dssp CCEEEEEEEEEEECSSSSEE-EEEEEEEEEEECSEEEECSCEEC
T ss_pred EeEEEEEEEEecCCCccccc-ccCCCceEEEEcCEEEEcccccc
Confidence 5456554211101110 00 00013 5699999999999654
No 299
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=97.14 E-value=0.003 Score=64.33 Aligned_cols=36 Identities=17% Similarity=0.353 Sum_probs=32.8
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCC
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVG 149 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g 149 (644)
..|+|||||+.|+.+|..|++. |.+|+|+|+.+.+.
T Consensus 146 k~vvViGgG~ig~E~A~~l~~~------g~~Vtlv~~~~~~~ 181 (312)
T 4gcm_A 146 KRLFVIGGGDSAVEEGTFLTKF------ADKVTIVHRRDELR 181 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT------CSEEEEECSSSSCC
T ss_pred CEEEEECCCHHHHHHHHHHHhc------CCEEEEEecccccC
Confidence 4799999999999999999999 99999999987653
No 300
>1hfe_L Protein (Fe-only hydrogenase (E.C.1.18.99.1) (larger subunit)); hydrogene metabolism, periplasm; 1.60A {Desulfovibrio vulgaris subsp} SCOP: c.96.1.1 d.58.1.5 PDB: 1e08_A* 1gx7_A*
Probab=97.13 E-value=6.9e-05 Score=80.21 Aligned_cols=56 Identities=20% Similarity=0.339 Sum_probs=45.7
Q ss_pred cEEecCCCCccccCCCCCCCCcceeeCCeeEEEecCCCCceeEEE-ecCCcccCCCCcceeeeCCCCCcee
Q 006466 561 HLRLRDPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQI-NAQNCLHCKDFQACDIKDPKQNIKW 630 (644)
Q Consensus 561 h~~~~~~~~~~~~~~~~~~~~~~~~cpa~~y~~~~~~~~~~~~~~-~~~~c~~c~~~~~c~~~~p~~~i~w 630 (644)
.+.+ |++.|+.|. .|+++||.+++...++ . ...| |.+.|+.|| .|...||+++|.+
T Consensus 27 ~i~~-d~~kCi~Cg------~C~~~CP~~ai~~~~~---~-~~~i~~~~~C~~Cg---~C~~~CP~~Ai~~ 83 (421)
T 1hfe_L 27 FVQI-DEAKCIGCD------TCSQYCPTAAIFGEMG---E-PHSIPHIEACINCG---QCLTHCPENAIYE 83 (421)
T ss_dssp SEEE-CTTTCCCCC------HHHHHCTTCCCBCCTT---S-CCBCCCGGGCCCCC---TTGGGCTTCCEEE
T ss_pred eEEE-CcccCCCcc------HHHHhcCcCceecccc---c-ceeecChhhCCchh---hHHHhhCcCCccc
Confidence 3444 889999987 7999999999875432 1 2345 999999999 9999999999988
No 301
>1kqf_B FDH-N beta S, formate dehydrogenase, nitrate-inducible, iron-SU subunit; oxidoreductase, selenium, selenocysteine, seCys, molybdenum; HET: MGD HEM CDL; 1.60A {Escherichia coli} SCOP: d.58.1.5 f.23.22.1 PDB: 1kqg_B*
Probab=97.12 E-value=0.00015 Score=73.74 Aligned_cols=56 Identities=13% Similarity=0.180 Sum_probs=47.5
Q ss_pred CCCCccccCCCCCCCCcceeeCC-eeEEEecCCCCceeEEEecCCcccCCCCcceeeeCCCCCceeeC
Q 006466 566 DPKIPELVNLPEYAGPESRYCPA-RVYEYVPDEKNQLKLQINAQNCLHCKDFQACDIKDPKQNIKWTV 632 (644)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~cpa-~~y~~~~~~~~~~~~~~~~~~c~~c~~~~~c~~~~p~~~i~w~~ 632 (644)
+++.|..|. ..+|+.+||. +++...++ + .+.||.+.|+.|| .|...||++.|.+..
T Consensus 96 ~~~~C~~C~----~~~C~~~CP~~gAi~~~~~--g--~v~id~~~CigCg---~C~~~CP~~ai~~~~ 152 (294)
T 1kqf_B 96 RKDGCMHCE----DPGCLKACPSAGAIIQYAN--G--IVDFQSENCIGCG---YCIAGCPFNIPRLNK 152 (294)
T ss_dssp EEESCCCBS----SCHHHHHCCSTTSEEEETT--S--CEEECGGGCCCCC---HHHHHCTTCCCEEET
T ss_pred CcccCCCcC----ChhhhhhCCccCccccccc--c--ceEeCcccCCCcc---hhhhcCCCCCcEecC
Confidence 567798887 6689999999 99876433 2 6899999999999 999999999998865
No 302
>1ti6_B Pyrogallol hydroxytransferase small subunit; molybdenum binding enzyme, MGD-cofactors, DMSO-reductase family, 4Fe-4S-cluster; HET: MGD BTT; 2.00A {Pelobacter acidigallici} SCOP: b.3.5.1 d.58.1.5 PDB: 1ti2_B* 1ti4_B* 1vld_N* 1vle_N* 1vlf_N*
Probab=97.10 E-value=0.00015 Score=72.77 Aligned_cols=57 Identities=14% Similarity=0.033 Sum_probs=47.0
Q ss_pred CCCCccccCCCCCCCCcceeeCCeeEEEecCCCCceeEEEecCCcccCCCCcceeeeCCCCCceeeCCC
Q 006466 566 DPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQINAQNCLHCKDFQACDIKDPKQNIKWTVPE 634 (644)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~cpa~~y~~~~~~~~~~~~~~~~~~c~~c~~~~~c~~~~p~~~i~w~~p~ 634 (644)
.+..|..|. .-||+.+||+ ++...++ + .+.||.+.|+.|+ .|...||+++|.|....
T Consensus 64 ~~~~C~~C~----~p~C~~~CP~-Ai~~~~~--g--~v~id~~~CigC~---~C~~~CP~~Ai~~~~~~ 120 (274)
T 1ti6_B 64 RPTPCMHCE----NAPCVAKGNG-AVYQRED--G--IVLIDPEKAKGKK---ELLDTCPYGVMYWNEEE 120 (274)
T ss_dssp EEECCCCCT----TCHHHHHTTT-SEEECTT--S--CEEECTTTTTTCG---GGGGGCSSCCCEEETTT
T ss_pred cCCcCCCCC----ChHHHhhChH-HhhhccC--C--cEEechhhccchH---HHHhhCccCCeEEEccc
Confidence 467788887 6689999999 7765422 2 6899999999999 99999999999998543
No 303
>2zvs_A Uncharacterized ferredoxin-like protein YFHL; electron transport, [4Fe-4S] clusters, iron-SULF clusters, reduction potential; 1.65A {Escherichia coli}
Probab=97.08 E-value=0.00011 Score=59.93 Aligned_cols=55 Identities=18% Similarity=0.225 Sum_probs=44.9
Q ss_pred CCCCccccCCCCCCCCcceeeCCeeEEEecCCCCceeEEEecCCcccCCC---CcceeeeCCC-CCceee
Q 006466 566 DPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQINAQNCLHCKD---FQACDIKDPK-QNIKWT 631 (644)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~cpa~~y~~~~~~~~~~~~~~~~~~c~~c~~---~~~c~~~~p~-~~i~w~ 631 (644)
|.+.|+.|. .|+.+||.+++.+.++ .+.+|.+.|+.||. -..|...||+ ++|++.
T Consensus 4 ~~~~C~~C~------~C~~~CP~~ai~~~~~-----~~~~~~~~C~~C~~~~~~~~C~~~CP~~~Ai~~~ 62 (85)
T 2zvs_A 4 ITKKCINCD------MCEPECPNEAISMGDH-----IYEINSDKCTECVGHYETPTCQKVCPIPNTIVKD 62 (85)
T ss_dssp ECTTCCCCC------TTTTTCTTCCEECCSS-----SCEECGGGCCTTTTTCSSCHHHHHCSSCCEEECT
T ss_pred eCCcCcChh------HHHHHCchhccCcCCC-----ceEEeChhccCCCCcCCccHhhHhCcCCCCEEec
Confidence 567798886 7999999999987543 57899999999961 1279999999 999875
No 304
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.07 E-value=0.00023 Score=78.87 Aligned_cols=66 Identities=12% Similarity=0.177 Sum_probs=45.3
Q ss_pred HHHHHhcCCEEecCceEEEEEEcCC--CcEEEEEeCcCccccCCCcccccccceEE---EcCEEEEecCCCCcchHHHHH
Q 006466 219 GGKAEELGVEIYPGFAASEILYDAD--NKVIGIGTNDMGIAKDGSKKENFQRGVEL---RGRITLLAEGCRGSLSEKLIK 293 (644)
Q Consensus 219 ~~~a~~~Gv~i~~g~~v~~v~~~~~--g~v~gV~~~d~g~~~~G~~~~~~~~g~~i---~a~~vV~A~G~~s~l~~~l~~ 293 (644)
...+++.|++|++++.|++|+.+++ ++++||.+.+ .+|+. .++ .++.||+|+|+.. ..+|..
T Consensus 201 ~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~GV~~~~----~~g~~-------~~~~v~a~k~VILaaGa~~--sp~lL~ 267 (536)
T 1ju2_A 201 LNKGNSNNLRVGVHASVEKIIFSNAPGLTATGVIYRD----SNGTP-------HQAFVRSKGEVIVSAGTIG--TPQLLL 267 (536)
T ss_dssp GGGSCTTTEEEEESCEEEEEEECCSSSCBEEEEEEEC----TTSCE-------EEEEEEEEEEEEECCHHHH--HHHHHH
T ss_pred hhhhcCCCcEEEeCCEEEEEEECCCCCCEEEEEEEEe----CCCce-------EEEEeccCCEEEEcCcccC--CHHHHH
Confidence 3445667899999999999998763 4788998764 23331 245 5789999999865 334443
Q ss_pred HcCC
Q 006466 294 NFKL 297 (644)
Q Consensus 294 ~~~~ 297 (644)
..|+
T Consensus 268 ~SGi 271 (536)
T 1ju2_A 268 LSGV 271 (536)
T ss_dssp HTTE
T ss_pred HcCC
Confidence 4443
No 305
>1f2g_A Ferredoxin II; electron transport, FDII desulfovibrio gigas; NMR {Desulfovibrio gigas} SCOP: d.58.1.4 PDB: 1fxd_A
Probab=97.04 E-value=9.2e-05 Score=55.32 Aligned_cols=52 Identities=13% Similarity=0.127 Sum_probs=41.4
Q ss_pred CCCCccccCCCCCCCCcceeeCCeeEEEecCCCCceeEEEe--cCCcccCCCCcceeeeCCCCCceee
Q 006466 566 DPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQIN--AQNCLHCKDFQACDIKDPKQNIKWT 631 (644)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~cpa~~y~~~~~~~~~~~~~~~--~~~c~~c~~~~~c~~~~p~~~i~w~ 631 (644)
| +.|+.|. .|...||. ++.+.++ +. .+.++ .+.|..|+ .|...||+++|+++
T Consensus 5 d-~~C~~C~------~C~~~CP~-~~~~~~~--~~-~~~~~~~~~~C~~C~---~C~~~CP~~Ai~~~ 58 (58)
T 1f2g_A 5 N-DDCMACE------ACVEICPD-VFEMNEE--GD-KAVVINPDSDLDCVE---EAIDSCPAEAIVRS 58 (58)
T ss_dssp T-TTCCCCC------HHHHHCTT-TEEECSS--SS-SEEESCTTCCSTHHH---HHHHTCSSCCCBCC
T ss_pred C-CcCccch------HHHHhCCc-cEEECCC--Cc-EEEeCCCccchHHHH---HHHhhCChhhEEeC
Confidence 5 7788876 79999998 6766432 21 36778 89999999 99999999999863
No 306
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.02 E-value=0.00059 Score=76.42 Aligned_cols=43 Identities=19% Similarity=0.241 Sum_probs=39.5
Q ss_pred ccccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcc
Q 006466 104 ESMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHI 152 (644)
Q Consensus 104 ~~~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~ 152 (644)
+.++|||+|||+|..|...|..|++. |.+|++|||++..|+.+
T Consensus 5 ~~~~~D~~i~GtGl~~~~~a~~~~~~------g~~vl~id~~~~~gg~~ 47 (650)
T 1vg0_A 5 LPSDFDVIVIGTGLPESIIAAACSRS------GQRVLHVDSRSYYGGNW 47 (650)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSCGGG
T ss_pred CCCcCCEEEECCcHHHHHHHHHHHhC------CCEEEEEcCCCcccCcc
Confidence 45689999999999999999999999 99999999999998753
No 307
>2ivf_B Ethylbenzene dehydrogenase beta-subunit; anaerobic hydrocarbon degradation, MOCO, Fe/S cluster, MO- B enzyme, DMSO reductase family; HET: MES MGD MD1 HEM; 1.88A {Aromatoleum aromaticum}
Probab=96.99 E-value=0.00018 Score=74.55 Aligned_cols=58 Identities=12% Similarity=0.176 Sum_probs=48.7
Q ss_pred cCCCCccccCCCCCCCCcceeeCCeeEEEecCCCCceeEEEecCCcccCCCCcceeeeCCCCCceeeC
Q 006466 565 RDPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQINAQNCLHCKDFQACDIKDPKQNIKWTV 632 (644)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~cpa~~y~~~~~~~~~~~~~~~~~~c~~c~~~~~c~~~~p~~~i~w~~ 632 (644)
.+++.|..|. ..+|+.+||.+++...++ ++ .+.||.+.|+.|+ .|...||+++|.+..
T Consensus 146 ~~~~~C~~C~----~~~Cv~~CP~gAi~~~~~-~g--~v~id~~kCigCg---~Cv~aCP~~Ai~~~~ 203 (352)
T 2ivf_B 146 YLARMCNHCT----NPACLAACPTGAIYKRED-NG--IVLVDQERCKGHR---HCVEACPYKAIYFNP 203 (352)
T ss_dssp EEEECCCCCS----SCHHHHHCTTCCEEECTT-TC--CEEECTTTCCCCC---HHHHHCTTCCEEEET
T ss_pred ECCCCCcCcC----CccccccCCCCceeecCC-CC--eEEechhhcCCch---HHHhhcCccceeccc
Confidence 3678899887 668999999999876532 22 6889999999999 999999999998875
No 308
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=96.99 E-value=0.00051 Score=75.47 Aligned_cols=61 Identities=25% Similarity=0.244 Sum_probs=43.7
Q ss_pred HHHHHHhcC-CEEecCceEEEEEEcCCC-cEEEEEeCcCccccCCCcccccccceEEEcCEEEEecCCCCc
Q 006466 218 LGGKAEELG-VEIYPGFAASEILYDADN-KVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 286 (644)
Q Consensus 218 L~~~a~~~G-v~i~~g~~v~~v~~~~~g-~v~gV~~~d~g~~~~G~~~~~~~~g~~i~a~~vV~A~G~~s~ 286 (644)
+...+++.| ++|++++.|++|+.++++ ++++|++.+ .+|.. ....+++|+.||+|.|+...
T Consensus 227 ~l~~a~~~~n~~i~~~~~V~~i~~~~~g~~~~gV~~~~----~~g~~----~~~~~v~A~~VIlaaG~~~s 289 (504)
T 1n4w_A 227 YLAAALGTGKVTIQTLHQVKTIRQTKDGGYALTVEQKD----TDGKL----LATKEISCRYLFLGAGSLGS 289 (504)
T ss_dssp HHHHHHHTTSEEEEESEEEEEEEECTTSSEEEEEEEEC----TTCCE----EEEEEEEEEEEEECSHHHHH
T ss_pred HHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeC----CCCcc----ceeEEEeeCEEEEccCCCCC
Confidence 345555665 999999999999998644 788998753 22310 00157899999999998754
No 309
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=96.96 E-value=0.00035 Score=79.19 Aligned_cols=36 Identities=31% Similarity=0.575 Sum_probs=33.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCC--------CeEEEEcCCC-CC
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVD--------LSVCVVEKGA-EV 148 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G--------~~V~viEk~~-~~ 148 (644)
..+|+|||||++||++|+.|++. | ++|+|+|+++ .+
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~------g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRL------AATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH------HTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHc------CcccccCCCceEEEEeccCccc
Confidence 46899999999999999999998 7 9999999998 88
No 310
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=96.94 E-value=0.003 Score=69.96 Aligned_cols=35 Identities=17% Similarity=0.234 Sum_probs=32.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCC
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~ 147 (644)
..+|+|||+|..|+.+|..|++. +.+|+|+++.+.
T Consensus 178 ~krV~VIG~G~sgve~a~~l~~~------~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 178 GRRVGVIGTGSTGQQVITSLAPE------VEHLTVFVRTPQ 212 (540)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTT------CSEEEEEESSCC
T ss_pred cceEEEECCCchHHHHHHHHHhh------CCEEEEEECCCC
Confidence 45899999999999999999999 999999999886
No 311
>1q16_B Respiratory nitrate reductase 1 beta chain; membrane protein, electron-transfer, oxidoreductase; HET: FME MD1 HEM AGA 3PH; 1.90A {Escherichia coli} SCOP: d.58.1.5 PDB: 1r27_B* 1siw_B* 1y5i_B* 1y5l_B* 1y5n_B* 3ir5_B* 3ir6_B* 3ir7_B* 1y4z_B* 3egw_B*
Probab=96.93 E-value=0.0002 Score=77.53 Aligned_cols=58 Identities=16% Similarity=0.229 Sum_probs=48.6
Q ss_pred CCCCccccCCCCCCCCcceeeCCeeEEEecCCCCceeEEEecCCcccCCCCcceeeeCCCCCceeeCC
Q 006466 566 DPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQINAQNCLHCKDFQACDIKDPKQNIKWTVP 633 (644)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~cpa~~y~~~~~~~~~~~~~~~~~~c~~c~~~~~c~~~~p~~~i~w~~p 633 (644)
+++.|..|. ..+|+.+||.+++...++ ++ .+.||.+.|+.|| .|...||+++|.|..-
T Consensus 180 ~~~~C~~C~----~~~Cv~aCP~gAI~~~~~-~g--~v~id~~kCigCg---~Cv~~CP~~AI~~~~~ 237 (512)
T 1q16_B 180 LPRLCEHCL----NPACVATCPSGAIYKREE-DG--IVLIDQDKCRGWR---MCITGCPYKKIYFNWK 237 (512)
T ss_dssp EEECCCCCS----SCHHHHTCTTCCEEEETT-TC--CEEECTTTCCCCC---CHHHHCTTCCEEEETT
T ss_pred cCccCcCCC----CchhhhhCCcCcEEeecC-CC--eEEECHHHCCCch---HHHhhCCccceecccC
Confidence 678898886 568999999999987532 12 6899999999999 9999999999998753
No 312
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=96.92 E-value=0.0029 Score=70.15 Aligned_cols=36 Identities=14% Similarity=0.228 Sum_probs=33.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCC
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEV 148 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~ 148 (644)
..+|+|||+|..|+.+|..|++. +.+|+|+++.+..
T Consensus 185 ~krV~VIG~G~tgve~a~~la~~------~~~Vtv~~r~~~~ 220 (545)
T 3uox_A 185 GKRVGVIGTGATGVQIIPIAAET------AKELYVFQRTPNW 220 (545)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTT------BSEEEEEESSCCC
T ss_pred CCeEEEECCCccHHHHHHHHHhh------CCEEEEEEcCCCc
Confidence 45799999999999999999998 9999999999863
No 313
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=96.90 E-value=0.0014 Score=75.33 Aligned_cols=36 Identities=22% Similarity=0.116 Sum_probs=32.3
Q ss_pred cccEEEEC--CCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCC
Q 006466 107 AYDVVIVG--AGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVG 149 (644)
Q Consensus 107 ~~DVvIVG--gG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g 149 (644)
...|+||| ||..|+.+|..|++. |.+|+|+++.+ +.
T Consensus 528 gk~VvVIG~GgG~~g~e~A~~l~~~------G~~Vtlv~~~~-l~ 565 (729)
T 1o94_A 528 GKRVVILNADTYFMAPSLAEKLATA------GHEVTIVSGVH-LA 565 (729)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHHT------TCEEEEEESSC-TT
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHc------CCEEEEEeccc-cc
Confidence 35799998 999999999999999 99999999987 53
No 314
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=96.88 E-value=0.00069 Score=74.52 Aligned_cols=61 Identities=13% Similarity=0.162 Sum_probs=43.3
Q ss_pred HHHHHHhcC-CEEecCceEEEEEEcCCC-cEEEEEeCcCccccCCCcccccccceEEEcCEEEEecCCCCc
Q 006466 218 LGGKAEELG-VEIYPGFAASEILYDADN-KVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 286 (644)
Q Consensus 218 L~~~a~~~G-v~i~~g~~v~~v~~~~~g-~v~gV~~~d~g~~~~G~~~~~~~~g~~i~a~~vV~A~G~~s~ 286 (644)
+...+++.| ++|+.++.|++|+.++++ ++++|++.+ .+|.. ....+++|+.||+|.|+...
T Consensus 232 ~l~~a~~~~n~~i~~~~~v~~i~~~~~g~~~~gV~~~~----~~g~~----~~~~~~~A~~VIlaaGa~~s 294 (507)
T 1coy_A 232 YLAQAAATGKLTITTLHRVTKVAPATGSGYSVTMEQID----EQGNV----VATKVVTADRVFFAAGSVGT 294 (507)
T ss_dssp HHHHHHHTTCEEEECSEEEEEEEECSSSSEEEEEEEEC----TTSCE----EEEEEEEEEEEEECSHHHHH
T ss_pred HHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeC----CCCcc----cccEEEEeCEEEEccCccCC
Confidence 344455554 999999999999998755 688998753 12310 00157899999999998754
No 315
>1iqz_A Ferredoxin; iron-sulfer protein, ultlahigh resolution analysis, geometry of [4Fe-4S] cluster, electron transport; 0.92A {Bacillus thermoproteolyticus} SCOP: d.58.1.4 PDB: 1ir0_A 1wtf_A*
Probab=96.87 E-value=0.00022 Score=57.44 Aligned_cols=55 Identities=15% Similarity=0.053 Sum_probs=43.2
Q ss_pred CCCCccccCCCCCCCCcceeeCCeeEEEecCCCCceeEEE-----------ecCCcccCCCCcceeeeCCCCCceeeCCC
Q 006466 566 DPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQI-----------NAQNCLHCKDFQACDIKDPKQNIKWTVPE 634 (644)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~cpa~~y~~~~~~~~~~~~~~-----------~~~~c~~c~~~~~c~~~~p~~~i~w~~p~ 634 (644)
|++.|+.|. -|+.+|| +++++.++ + +..+ +.+.|..|+ .|...||+++|+|.-.+
T Consensus 7 d~~~CigCg------~C~~~CP-~~~~~~~~--g--~~~~~~~~~~~~~~~~~~~c~~C~---~C~~~CP~~AI~~~~~~ 72 (81)
T 1iqz_A 7 DKETCIACG------ACGAAAP-DIYDYDED--G--IAYVTLDDNQGIVEVPDILIDDMM---DAFEGCPTDSIKVADEP 72 (81)
T ss_dssp CTTTCCCCS------HHHHHCT-TTEEECTT--S--CEEETTTTTSSCSCCCGGGHHHHH---HHHHHCTTCCEEEESSC
T ss_pred ecccCcccC------hhhHhCc-hheeeCCC--C--eEEEeccCccccCCCCHHHHHHHH---HHHHhCCHhHEEEecCC
Confidence 788999887 6999999 78887532 2 2222 356899999 99999999999997544
No 316
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=96.85 E-value=0.002 Score=65.45 Aligned_cols=100 Identities=6% Similarity=0.104 Sum_probs=70.3
Q ss_pred ccEEEECCCH-HHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCCcccccCccChHHHHHHhhhhhhcCCCeeeeccCCcE
Q 006466 108 YDVVIVGAGP-AGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (644)
Q Consensus 108 ~DVvIVGgG~-aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (644)
.+++|||||. +++.+|..+++. +.+|+++++.+.+.
T Consensus 147 ~~~~VIggG~~~~~e~a~~~~~~------~~~v~i~~~~~~~~------------------------------------- 183 (304)
T 4fk1_A 147 QPLIIISENEDHTLHMTKLVYNW------STDLVIATNGNELS------------------------------------- 183 (304)
T ss_dssp SCEEEECCSHHHHHHHHHHHTTT------CSCEEEECSSCCCC-------------------------------------
T ss_pred CceeeecCCCchhhhHHHHHHhC------CceEEEEeccccch-------------------------------------
Confidence 4678888775 568888888888 99999998765321
Q ss_pred EEeccCCccccCCCCCCCCcEEEcHHHHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCccccc
Q 006466 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (644)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~ 266 (644)
..+.+.+++.|+.++.+. ++.+..++ +.+..|++.+
T Consensus 184 -----------------------------~~~~~~l~~~g~~~~~~~-v~~~~~~~-~~~~~v~~~~------------- 219 (304)
T 4fk1_A 184 -----------------------------QTIMDELSNKNIPVITES-IRTLQGEG-GYLKKVEFHS------------- 219 (304)
T ss_dssp -----------------------------HHHHHHHHTTTCCEECSC-EEEEESGG-GCCCEEEETT-------------
T ss_pred -----------------------------hhhhhhhhccceeEeeee-EEEeecCC-Ceeeeeeccc-------------
Confidence 113445567789888764 66665443 5666788776
Q ss_pred ccceEEEcCEEEEecCCCCcchHHHHHHcCCC
Q 006466 267 QRGVELRGRITLLAEGCRGSLSEKLIKNFKLR 298 (644)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~l~~~l~~~~~~~ 298 (644)
|.++.++.+|++.|.+... .+.+..++.
T Consensus 220 --g~~i~~~~~vi~~g~~~~~--~~~~~~g~~ 247 (304)
T 4fk1_A 220 --GLRIERAGGFIVPTFFRPN--QFIEQLGCE 247 (304)
T ss_dssp --SCEECCCEEEECCEEECSS--CHHHHTTCC
T ss_pred --cceeeecceeeeeccccCC--hhhhhcCeE
Confidence 7789999988888877653 245566665
No 317
>3or1_B Sulfite reductase beta; dissimilatory sulfite reductase, sulfate reduction, oxidored sulfite reduction; HET: SRM; 1.76A {Desulfovibrio gigas} PDB: 3or2_B* 2v4j_B* 2xsj_B*
Probab=96.83 E-value=0.00013 Score=77.09 Aligned_cols=57 Identities=21% Similarity=0.377 Sum_probs=43.8
Q ss_pred CCCCcc-ccCCCCCCCCcceeeCCeeEEEecCC-CCc--eeEEEecCCcccCCCCcceeeeCCCCCce
Q 006466 566 DPKIPE-LVNLPEYAGPESRYCPARVYEYVPDE-KNQ--LKLQINAQNCLHCKDFQACDIKDPKQNIK 629 (644)
Q Consensus 566 ~~~~~~-~~~~~~~~~~~~~~cpa~~y~~~~~~-~~~--~~~~~~~~~c~~c~~~~~c~~~~p~~~i~ 629 (644)
|.+.|. .|+ ...|+.+||.+++.+.+.+ ++. ..+.||.+.|+.|| .|...||+++|.
T Consensus 214 d~e~~~~~Ce----~~~cv~~CPt~AI~~~~~~~~g~~~~~v~id~~~Ci~Cg---~C~~~CP~~Ai~ 274 (386)
T 3or1_B 214 DHENLAELCE----IPLAVAACPTAAVKPITAEVNGQKVKSVAINNDRCMYCG---NCYTMCPALPLS 274 (386)
T ss_dssp CTTTHHHHCC----HHHHHHHCTTCCEEEEEEEETTEEEEEEEECTTTCCCCC---HHHHHCTTCCCC
T ss_pred chhhhccccc----chhhhhhCchhhccccccccCCccccccccCCCcCCccc---cHHHhCcHhhCc
Confidence 555554 354 3579999999999986421 221 36999999999999 999999998874
No 318
>3mm5_B Sulfite reductase, dissimilatory-type subunit BET; alpha-beta-protein, oxidoreductase; HET: SRM; 1.80A {Archaeoglobus fulgidus} PDB: 3c7b_B* 3mm6_B* 3mm7_B* 3mm8_B* 3mm9_B* 3mma_B* 3mmb_B* 3mmc_B*
Probab=96.81 E-value=0.00017 Score=75.68 Aligned_cols=54 Identities=11% Similarity=0.293 Sum_probs=43.1
Q ss_pred CCCCc-cccCCCCCCCCcceeeCCeeEEEecCCCCceeEEEecCCcccCCCCcceeeeCCCCCce
Q 006466 566 DPKIP-ELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQINAQNCLHCKDFQACDIKDPKQNIK 629 (644)
Q Consensus 566 ~~~~~-~~~~~~~~~~~~~~~cpa~~y~~~~~~~~~~~~~~~~~~c~~c~~~~~c~~~~p~~~i~ 629 (644)
|.+.| ..|+ ...|+..||.+++++.++. ..+.||.+.|+.|| .|.-+||+++|.
T Consensus 203 d~~~c~~~Ce----~~~Cv~~CP~~AI~~~~~~---~~~~id~~~C~~Cg---~C~~~CP~~Ai~ 257 (366)
T 3mm5_B 203 NDEAIRKTCE----IPSTVAACPTGALKPDMKN---KTIKVDVEKCMYCG---NCYTMCPGMPLF 257 (366)
T ss_dssp CHHHHHHHCC----HHHHHHTCTTCCEEEETTT---TEEEECGGGCCCCC---HHHHHCTTCCCC
T ss_pred cchhcccccc----ccchhccCCccceEecCCC---CeEEEehhhCCCcc---hHHHhCCHhhcc
Confidence 44444 4464 3579999999999987421 17999999999999 999999998884
No 319
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=96.70 E-value=0.0036 Score=67.94 Aligned_cols=35 Identities=9% Similarity=0.031 Sum_probs=32.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCC
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~ 147 (644)
...|+|||+|.+|+..|..|++. |.+|+++++++.
T Consensus 197 ~k~VvVVG~G~sg~eiA~~l~~~------g~~V~li~~~~~ 231 (464)
T 2xve_A 197 DKTVLLVGSSYSAEDIGSQCYKY------GAKKLISCYRTA 231 (464)
T ss_dssp TSEEEEECCSTTHHHHHHHHHHT------TCSEEEEECSSC
T ss_pred CCEEEEEcCCCCHHHHHHHHHHh------CCeEEEEEECCC
Confidence 45799999999999999999999 999999998764
No 320
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=96.64 E-value=0.0058 Score=64.90 Aligned_cols=53 Identities=21% Similarity=0.292 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccccccceEEEcCEEEEecCCCCc
Q 006466 213 QLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 286 (644)
Q Consensus 213 ~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~~~g~~i~a~~vV~A~G~~s~ 286 (644)
.+.+.+.+.+++.||+++++++|+++..+ +|.+.+ |.++.+|.||.|+|..+.
T Consensus 219 ~~~~~~~~~l~~~gV~~~~~~~v~~i~~~------~v~~~~---------------g~~~~~D~vi~a~G~~~~ 271 (409)
T 3h8l_A 219 NSRKAVASIYNQLGIKLVHNFKIKEIREH------EIVDEK---------------GNTIPADITILLPPYTGN 271 (409)
T ss_dssp HHHHHHHHHHHHHTCEEECSCCEEEECSS------EEEETT---------------SCEEECSEEEEECCEECC
T ss_pred HHHHHHHHHHHHCCCEEEcCCceEEECCC------eEEECC---------------CCEEeeeEEEECCCCCcc
Confidence 34666777788899999999999988532 256655 678999999999997653
No 321
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=96.62 E-value=0.0032 Score=71.73 Aligned_cols=52 Identities=17% Similarity=0.169 Sum_probs=36.5
Q ss_pred HHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccccccceEEEcCEEEEecCCCC
Q 006466 216 RWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRG 285 (644)
Q Consensus 216 ~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~~~g~~i~a~~vV~A~G~~s 285 (644)
..+.+.+++.||+++++++++++. +++ + .+. .+ |+ ..++.+|.||.|+|..+
T Consensus 577 ~~~~~~l~~~GV~v~~~~~v~~i~--~~~-v-~~~-~~------G~-------~~~i~~D~Vi~a~G~~p 628 (671)
T 1ps9_A 577 WIHRTTLLSRGVKMIPGVSYQKID--DDG-L-HVV-IN------GE-------TQVLAVDNVVICAGQEP 628 (671)
T ss_dssp HHHHHHHHHTTCEEECSCEEEEEE--TTE-E-EEE-ET------TE-------EEEECCSEEEECCCEEE
T ss_pred HHHHHHHHhcCCEEEeCcEEEEEe--CCe-E-EEe-cC------Ce-------EEEEeCCEEEECCCccc
Confidence 345666778999999999999886 223 2 232 22 11 25799999999999654
No 322
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=96.60 E-value=0.004 Score=69.04 Aligned_cols=35 Identities=17% Similarity=0.352 Sum_probs=32.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCC
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~ 147 (644)
...|+|||+|..|+.+|..|++. +.+|+|+++.+.
T Consensus 191 ~krV~VIG~G~sgve~a~~l~~~------~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 191 GKRVGVIGTGSSGIQSIPIIAEQ------AEQLFVFQRSAN 225 (549)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHH------BSEEEEEESSCC
T ss_pred CCEEEEECCCchHHHHHHHHHhh------CCEEEEEECCCC
Confidence 45799999999999999999999 999999999885
No 323
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=96.57 E-value=0.0027 Score=68.46 Aligned_cols=35 Identities=14% Similarity=0.181 Sum_probs=31.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCe-EEEEcCCCC
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLS-VCVVEKGAE 147 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~-V~viEk~~~ 147 (644)
..+|+|||+|.+|+..|..|++. +.+ |+++++++.
T Consensus 212 ~k~VvVvG~G~sg~e~A~~l~~~------~~~~V~l~~r~~~ 247 (447)
T 2gv8_A 212 GESVLVVGGASSANDLVRHLTPV------AKHPIYQSLLGGG 247 (447)
T ss_dssp TCCEEEECSSHHHHHHHHHHTTT------SCSSEEEECTTCC
T ss_pred CCEEEEEccCcCHHHHHHHHHHH------hCCcEEEEeCCCC
Confidence 45799999999999999999999 888 999998753
No 324
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=96.47 E-value=0.0044 Score=66.42 Aligned_cols=54 Identities=19% Similarity=0.247 Sum_probs=38.8
Q ss_pred HHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccccccceEEEcCEEEEecCCCC
Q 006466 215 VRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRG 285 (644)
Q Consensus 215 ~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~~~g~~i~a~~vV~A~G~~s 285 (644)
.+.+.+.+++.||++++++.|+++..+ + |++.+ .++ .+.++.+|.||.|.|..+
T Consensus 203 ~~~l~~~l~~~GV~i~~~~~v~~v~~~--~----v~~~~----~~~-------~g~~i~~D~vv~a~G~~~ 256 (430)
T 3h28_A 203 KRLVEDLFAERNIDWIANVAVKAIEPD--K----VIYED----LNG-------NTHEVPAKFTMFMPSFQG 256 (430)
T ss_dssp HHHHHHHHHHTTCEEECSCEEEEECSS--E----EEEEC----TTS-------CEEEEECSEEEEECEEEC
T ss_pred HHHHHHHHHHCCCEEEeCCEEEEEeCC--e----EEEEe----cCC-------CceEEeeeEEEECCCCcc
Confidence 455677788899999999999988432 2 33332 111 157899999999999765
No 325
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=96.47 E-value=0.036 Score=58.40 Aligned_cols=51 Identities=22% Similarity=0.213 Sum_probs=39.1
Q ss_pred HHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccccccceEEEcCEEEEecCCCC
Q 006466 218 LGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRG 285 (644)
Q Consensus 218 L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~~~g~~i~a~~vV~A~G~~s 285 (644)
+.+..++.|++++.+++++.+..+.++. .|.+.+ |.++.+|.||.|.|..+
T Consensus 208 ~~~~l~~~gi~v~~~~~v~~v~~~~~~~--~v~~~~---------------g~~i~~D~vi~~~g~~~ 258 (401)
T 3vrd_B 208 YGFGTENALIEWHPGPDAAVVKTDTEAM--TVETSF---------------GETFKAAVINLIPPQRA 258 (401)
T ss_dssp SCTTSTTCSEEEECTTTTCEEEEETTTT--EEEETT---------------SCEEECSEEEECCCEEE
T ss_pred HHHHHHhcCcEEEeCceEEEEEecccce--EEEcCC---------------CcEEEeeEEEEecCcCC
Confidence 3444567899999999998887766543 367665 77899999999998654
No 326
>1sj1_A Ferredoxin; thermostability, iron-sulfur cluster, hexammine cobalt(III), electron transport; HET: NCO; 1.50A {Pyrococcus furiosus} SCOP: d.58.1.4 PDB: 1siz_A* 2z8q_A 3pni_A
Probab=96.35 E-value=0.00046 Score=52.75 Aligned_cols=53 Identities=15% Similarity=0.054 Sum_probs=40.1
Q ss_pred CCCCccccCCCCCCCCcceeeCCeeEEEecCCCCceeEEEe---cC--CcccCCCCcceeeeCCCCCceee
Q 006466 566 DPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQIN---AQ--NCLHCKDFQACDIKDPKQNIKWT 631 (644)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~cpa~~y~~~~~~~~~~~~~~~---~~--~c~~c~~~~~c~~~~p~~~i~w~ 631 (644)
|++.|+.|. .|+..||. ++++.++ +. ...++ .+ .|..|+ .|...||+++|+++
T Consensus 7 d~~~C~~C~------~C~~~Cp~-~~~~~~~--~~-~~~~~~~~~~~~~c~~c~---~C~~~CP~~Ai~~~ 64 (66)
T 1sj1_A 7 DQDTCIGDA------ICASLCPD-VFEMNDE--GK-AQPKVEVIEDEELYNCAK---EAMEACPVSAITIE 64 (66)
T ss_dssp CTTTCCCCC------HHHHHCTT-TEEECTT--SC-EEESCSCBCCHHHHHHHH---HHHHHCTTCCEEEE
T ss_pred CcccCcCch------HHHHhCCc-eEEECCC--Cc-eeecccCCCcHHHHHHHH---HHHhhCCHhhEEEe
Confidence 778899886 79999995 8887532 21 23444 23 478899 99999999999875
No 327
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A*
Probab=96.23 E-value=0.0015 Score=78.54 Aligned_cols=59 Identities=24% Similarity=0.388 Sum_probs=46.6
Q ss_pred ecCCCCccccCCCCCCCCcceeeCCeeEEEe---cCC------------------CC-ceeEEEecCCcccCCCCcceee
Q 006466 564 LRDPKIPELVNLPEYAGPESRYCPARVYEYV---PDE------------------KN-QLKLQINAQNCLHCKDFQACDI 621 (644)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~cpa~~y~~~---~~~------------------~~-~~~~~~~~~~c~~c~~~~~c~~ 621 (644)
+.|++.|+.|. .|+++||.+++... +++ .+ ...++++.+.|+.|| .|..
T Consensus 682 ~~d~~kCi~Cg------~Cv~vCP~~AI~~~~~~~~e~~~ap~g~~~~~~~~k~~~g~~~~~~v~~~~C~gCG---~Cv~ 752 (1231)
T 2c42_A 682 QWVPENCIQCN------QCAFVCPHSAILPVLAKEEELVGAPANFTALEAKGKELKGYKFRIQINTLDCMGCG---NCAD 752 (1231)
T ss_dssp EECTTTCCCCC------HHHHHCSSCCEEEEEECGGGGTTCCTTCCCEECCSGGGTTCEEEEEECTTTCCCCC---HHHH
T ss_pred EEeCccCCchh------hHHHhCCcccccccccchHHHhhCcccccccccccccccccccceeechhhCCChh---HHHh
Confidence 45889999997 79999999999763 110 00 124789999999999 9999
Q ss_pred eCCC--CCceee
Q 006466 622 KDPK--QNIKWT 631 (644)
Q Consensus 622 ~~p~--~~i~w~ 631 (644)
.||. ++|+..
T Consensus 753 vCP~~~~AI~~~ 764 (1231)
T 2c42_A 753 ICPPKEKALVMQ 764 (1231)
T ss_dssp HCSSSSCSEEEE
T ss_pred hCCCCccCeEEe
Confidence 9999 888654
No 328
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=96.23 E-value=0.0049 Score=63.49 Aligned_cols=33 Identities=15% Similarity=0.318 Sum_probs=29.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCC
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~ 146 (644)
..+|+|||+|..|+.+|..|++. + +|+++++..
T Consensus 163 ~~~v~VvG~G~~g~e~a~~l~~~------~-~v~~v~~~~ 195 (357)
T 4a9w_A 163 GMRVAIIGGGNSGAQILAEVSTV------A-ETTWITQHE 195 (357)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTT------S-EEEEECSSC
T ss_pred CCEEEEECCCcCHHHHHHHHHhh------C-CEEEEECCC
Confidence 35799999999999999999998 7 699999874
No 329
>3mm5_A Sulfite reductase, dissimilatory-type subunit ALP; alpha-beta-protein, oxidoreductase; HET: SRM; 1.80A {Archaeoglobus fulgidus} PDB: 3mm6_A* 3mm7_A* 3mm8_A* 3mm9_A* 3mma_A* 3mmb_A* 3mmc_A* 3c7b_A*
Probab=96.20 E-value=0.0012 Score=69.86 Aligned_cols=40 Identities=25% Similarity=0.571 Sum_probs=35.8
Q ss_pred CCcceeeCCeeEEEecCCCCceeEEEecCCcccCCCCcceeeeCCCCC
Q 006466 580 GPESRYCPARVYEYVPDEKNQLKLQINAQNCLHCKDFQACDIKDPKQN 627 (644)
Q Consensus 580 ~~~~~~cpa~~y~~~~~~~~~~~~~~~~~~c~~c~~~~~c~~~~p~~~ 627 (644)
+.|+..||.+|+.+... ++.||.+.|+.|| .|.-.||+..
T Consensus 261 ~~cv~~CPt~Ai~~~~~-----~~~id~~~Ci~Cg---~Ci~~CP~~~ 300 (418)
T 3mm5_A 261 NEVVKLCPTGAIKWDGK-----ELTIDNRECVRCM---HCINKMPKAL 300 (418)
T ss_dssp HHTGGGCTTCCEEECSS-----CEEECTTTCCCCC---HHHHHCTTTE
T ss_pred ccccccCCccccccCCc-----eeEEChhhcCccC---hhHHhCcHhh
Confidence 47999999999998643 7999999999999 9999999853
No 330
>3j16_B RLI1P; ribosome recycling, translation, eukarya, ribosome; HET: ATP; 7.20A {Saccharomyces cerevisiae}
Probab=96.16 E-value=0.0013 Score=73.54 Aligned_cols=60 Identities=20% Similarity=0.321 Sum_probs=46.7
Q ss_pred CcEEecCCCCccc--cCCCCCCCCcceeeCC-----eeEEEecCCCCceeEEEecCCcccCCCCcceeeeCCCCCcee
Q 006466 560 AHLRLRDPKIPEL--VNLPEYAGPESRYCPA-----RVYEYVPDEKNQLKLQINAQNCLHCKDFQACDIKDPKQNIKW 630 (644)
Q Consensus 560 ~h~~~~~~~~~~~--~~~~~~~~~~~~~cpa-----~~y~~~~~~~~~~~~~~~~~~c~~c~~~~~c~~~~p~~~i~w 630 (644)
-.|-|.|.+.|.- |+ ..|.+|||- .|+++.++. + +..|+.+-|+.|| .|.-|||+++|+=
T Consensus 6 ~~~~~~~~~~c~~~~~~-----~~c~~~cp~~~~~~~~~~~~~~~-~--~~~i~~~~c~~~~---~~~~~cp~~~i~i 72 (608)
T 3j16_B 6 SRIAIVSADKCKPKKCR-----QECKRSCPVVKTGKLCIEVTPTS-K--IAFISEILCIGCG---ICVKKCPFDAIQI 72 (608)
T ss_dssp EEEEEECSSSCCHHHHC-----SHHHHHCHHHHHTCCSEEEETTT-T--EEEECTTTCCCCC---HHHHHCSSCCEEE
T ss_pred ceEEEEeccccCccccc-----cchhhcCCCccCCceEEEEcCCC-C--ceEEehhhccccc---cccccCCccceEE
Confidence 3566778888864 53 479999994 488875432 2 7899999999999 9999999998843
No 331
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=96.02 E-value=0.017 Score=61.91 Aligned_cols=59 Identities=15% Similarity=0.262 Sum_probs=38.6
Q ss_pred HHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccccccceEEEcCEEEEecCCCC
Q 006466 215 VRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRG 285 (644)
Q Consensus 215 ~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~~~g~~i~a~~vV~A~G~~s 285 (644)
.+.+.+.+++.||+++++++|+++..+ + + .+...+ .+|+. .++.++.+|.||.|.|..+
T Consensus 211 ~~~~~~~l~~~gI~~~~~~~v~~v~~~--~-v-~~~~~~----~~g~~----~~~~~i~~D~vv~~~g~~~ 269 (437)
T 3sx6_A 211 KGILTKGLKEEGIEAYTNCKVTKVEDN--K-M-YVTQVD----EKGET----IKEMVLPVKFGMMIPAFKG 269 (437)
T ss_dssp HHHHHHHHHHTTCEEECSEEEEEEETT--E-E-EEEEEC----TTSCE----EEEEEEECSEEEEECCEEC
T ss_pred HHHHHHHHHHCCCEEEcCCEEEEEECC--e-E-EEEecc----cCCcc----ccceEEEEeEEEEcCCCcC
Confidence 445667778899999999999998532 2 2 122111 22321 1146799999999999654
No 332
>1h0h_B Formate dehydrogenase (small subunit); tungsten selenium formate dehydrogenase, selenocysteine, molybdopterin, MGD, iron-sulphur cluster; HET: 2MD MGD EPE; 1.8A {Desulfovibrio gigas} SCOP: d.58.1.5
Probab=95.97 E-value=0.00098 Score=64.40 Aligned_cols=58 Identities=7% Similarity=-0.136 Sum_probs=47.8
Q ss_pred CCCCccccCCCCCCCCcceeeC---CeeEEEecCCCCceeEEEecCCcc--cCCCCcceeeeCCCCCceeeCC
Q 006466 566 DPKIPELVNLPEYAGPESRYCP---ARVYEYVPDEKNQLKLQINAQNCL--HCKDFQACDIKDPKQNIKWTVP 633 (644)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~cp---a~~y~~~~~~~~~~~~~~~~~~c~--~c~~~~~c~~~~p~~~i~w~~p 633 (644)
++..|..|. .-+|+.+|| .+++...+. .+ .+.||.+.|+ .|+ .|...||+++|.+...
T Consensus 68 ~~~~C~~C~----~p~C~~~CP~~~~gAi~~~~~-~g--~v~id~~~C~~~~C~---~C~~~CP~~Ai~~~~~ 130 (214)
T 1h0h_B 68 FPDQCRHCI----APPCKATADMEDESAIIHDDA-TG--CVLFTPKTKDLEDYE---SVISACPYDVPRKVAE 130 (214)
T ss_dssp EEECCCCCS----SCHHHHHHTTTCTTSEEECTT-TC--CEEECGGGGGCSCHH---HHHHHCTTCCCEECTT
T ss_pred cCCcCcCcC----CchhhccCCccccccEEecCC-CC--eEEEeHHHCcccccc---HHHHhcCCCCeEecCC
Confidence 467788887 557999999 999886531 22 6899999999 999 9999999999998643
No 333
>3or1_A Sulfite reductase alpha; dissimilatory sulfite reductase, sulfate reduction, oxidored sulfite reduction; HET: SRM; 1.76A {Desulfovibrio gigas} PDB: 3or2_A* 2v4j_A* 2xsj_A*
Probab=95.94 E-value=0.0018 Score=68.63 Aligned_cols=39 Identities=26% Similarity=0.557 Sum_probs=35.0
Q ss_pred CcceeeCCeeEEEecCCCCceeEEEecCCcccCCCCcceeeeCCCCC
Q 006466 581 PESRYCPARVYEYVPDEKNQLKLQINAQNCLHCKDFQACDIKDPKQN 627 (644)
Q Consensus 581 ~~~~~cpa~~y~~~~~~~~~~~~~~~~~~c~~c~~~~~c~~~~p~~~ 627 (644)
.|+..||.+|++|+.+ ++.||.++|++|+ .|.-+||+..
T Consensus 279 ~vv~~CPt~ai~~~~~-----~l~Id~~~C~~Cg---~Ci~~CP~al 317 (437)
T 3or1_A 279 EVVGLCPTGCMTYESG-----TLSIDNKNCTRCM---HCINTMPRAL 317 (437)
T ss_dssp HTTTTCTTCCEEEETT-----EEEECGGGCCCCS---HHHHHCTTTE
T ss_pred hhhccCcHHheeecCC-----EEEEccccCCchh---hhHhhCcHhh
Confidence 5889999999999743 8999999999999 9999999743
No 334
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=95.93 E-value=0.053 Score=59.27 Aligned_cols=38 Identities=11% Similarity=0.325 Sum_probs=31.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCC
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEV 148 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~ 148 (644)
...|+|||+|-+|.-.|..|++. .++.+|+++-|++..
T Consensus 246 gKrV~VVG~G~SA~ei~~~L~~~----~~~~~v~~~~R~~~~ 283 (501)
T 4b63_A 246 PYNIAVLGSGQSAAEIFHDLQKR----YPNSRTTLIMRDSAM 283 (501)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH----STTCEEEEECSSSSC
T ss_pred CcEEEEECCcHHHHHHHHHHHhc----CCCceEEEEeCCCcc
Confidence 45799999999999999999875 237899999988643
No 335
>3c8y_A Iron hydrogenase 1; dithiomethylether, H-cluster, iron-sulfur binding, oxidoreductase; HET: HCN; 1.39A {Clostridium pasteurianum} SCOP: c.96.1.1 d.15.4.2 d.58.1.5 PDB: 1c4c_A* 1c4a_A* 1feh_A*
Probab=95.52 E-value=0.001 Score=73.98 Aligned_cols=61 Identities=18% Similarity=0.276 Sum_probs=47.2
Q ss_pred cEEecCCCCccccCCCCCCCCcceeeCC----eeEEEecCCCCc-----eeEEEecCCcccCCCCcceeeeCCCCCceee
Q 006466 561 HLRLRDPKIPELVNLPEYAGPESRYCPA----RVYEYVPDEKNQ-----LKLQINAQNCLHCKDFQACDIKDPKQNIKWT 631 (644)
Q Consensus 561 h~~~~~~~~~~~~~~~~~~~~~~~~cpa----~~y~~~~~~~~~-----~~~~~~~~~c~~c~~~~~c~~~~p~~~i~w~ 631 (644)
.+.+ |++.|+.|. .|+++||. +++.+.++.... ....|+.+.|+.|| .|...||+++|++.
T Consensus 139 ~i~~-d~~kCi~Cg------~Cv~~CP~~~~~~ai~~~~~g~~~~i~~~~~~~i~~~~Ci~Cg---~Cv~~CP~gAi~~~ 208 (574)
T 3c8y_A 139 SLTV-DRTKCLLCG------RCVNACGKNTETYAMKFLNKNGKTIIGAEDEKCFDDTNCLLCG---QCIIACPVAALSEK 208 (574)
T ss_dssp SEEE-EGGGCCCCC------HHHHHHHHHHSCCCSEEEEETTEEEEESGGGCCGGGSSCCCCC---HHHHHCSSTTEEEC
T ss_pred ccee-CcccCcCCC------CccchhCchhcCCceeeccCCccceecccccceechhhCCcch---hHHHhhccCCcccc
Confidence 4555 788899987 79999997 888776432110 02458899999999 99999999999875
No 336
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=94.66 E-value=0.032 Score=50.50 Aligned_cols=35 Identities=31% Similarity=0.274 Sum_probs=31.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCC
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~ 147 (644)
...|+|+|+|..|..+|..|++. |.+|+++++.+.
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~------g~~V~vid~~~~ 53 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSS------GHSVVVVDKNEY 53 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCGG
T ss_pred CCcEEEECCCHHHHHHHHHHHhC------CCeEEEEECCHH
Confidence 45799999999999999999998 999999998764
No 337
>3bk7_A ABC transporter ATP-binding protein; ABC ATPase, iron-sulfur cluster, adenosine diphosphate, nucleotide-binding; HET: ADP; 2.80A {Pyrococcus abyssi} PDB: 3j15_B*
Probab=94.61 E-value=0.011 Score=66.15 Aligned_cols=62 Identities=19% Similarity=0.197 Sum_probs=45.1
Q ss_pred CCcEEecCCCCccccCCCCCCCCcceeeC-----CeeEEEecCCCCceeEEEecCCcccCCCCcceeeeCCCCCc
Q 006466 559 PAHLRLRDPKIPELVNLPEYAGPESRYCP-----ARVYEYVPDEKNQLKLQINAQNCLHCKDFQACDIKDPKQNI 628 (644)
Q Consensus 559 ~~h~~~~~~~~~~~~~~~~~~~~~~~~cp-----a~~y~~~~~~~~~~~~~~~~~~c~~c~~~~~c~~~~p~~~i 628 (644)
...|-|.|.+.|.--.|. ...|.+||| ..|+++.++. + +..|..+-|+.|| .|.-+||+..|
T Consensus 18 ~~~~~~~~~~~c~p~~c~--~~~c~~~cp~~~~~~~~~~~~~~~-~--~~~i~e~~c~gc~---~~~~~~p~~~i 84 (607)
T 3bk7_A 18 KMRIAVIDYDKCNPDKCG--HFLCERVCPVNRMGGEAIIIDEEN-Y--KPIIQEASCTGCG---ICVHKCPFNAI 84 (607)
T ss_dssp CEEEEECCGGGCCTTTSS--SCHHHHHCHHHHTTCCSEEEETTT-T--EEEECTTTCCCCC---HHHHHCSSCCC
T ss_pred cceEEEeeccccCCCCCC--hhhHhhhCCCCcCCceEEEEcCCC-C--cceeeecccCccc---cccCCCCcceE
Confidence 446777787777653221 247999999 3477776542 2 7899999999999 99999997544
No 338
>1ti6_B Pyrogallol hydroxytransferase small subunit; molybdenum binding enzyme, MGD-cofactors, DMSO-reductase family, 4Fe-4S-cluster; HET: MGD BTT; 2.00A {Pelobacter acidigallici} SCOP: b.3.5.1 d.58.1.5 PDB: 1ti2_B* 1ti4_B* 1vld_N* 1vle_N* 1vlf_N*
Probab=94.61 E-value=0.011 Score=59.20 Aligned_cols=55 Identities=22% Similarity=0.309 Sum_probs=44.8
Q ss_pred ecCCCCccccCCCCCCCCcceeeCCeeEEEecCCCCceeEEEecCCcccC----------CCCcceeeeCCCCCceee
Q 006466 564 LRDPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQINAQNCLHC----------KDFQACDIKDPKQNIKWT 631 (644)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~cpa~~y~~~~~~~~~~~~~~~~~~c~~c----------~~~~~c~~~~p~~~i~w~ 631 (644)
+.|.+.|+.|. -|...||.+++++.++. .+.+.|..| |.-..|...||+++|+|.
T Consensus 93 ~id~~~CigC~------~C~~~CP~~Ai~~~~~~-------~~~~kC~~C~~r~~~~~~~G~~P~Cv~~CP~~Ai~~~ 157 (274)
T 1ti6_B 93 LIDPEKAKGKK------ELLDTCPYGVMYWNEEE-------NVAQKCTMCAHLLDDESWAPKMPRCAHNCGSFVYEFL 157 (274)
T ss_dssp EECTTTTTTCG------GGGGGCSSCCCEEETTT-------TEEECCCTTHHHHTCTTCTTCSCHHHHHCSSCCEEEE
T ss_pred EechhhccchH------HHHhhCccCCeEEEccc-------CccccCCCchhhhhhhccCCCCcchhhhCCcCceEEc
Confidence 44888999887 69999999999987541 146789999 655599999999999885
No 339
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=94.09 E-value=0.049 Score=48.32 Aligned_cols=36 Identities=22% Similarity=0.383 Sum_probs=32.6
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCC
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~ 147 (644)
+.-.|+|+|+|..|..+|..|.+. |.+|+++|+.++
T Consensus 6 ~~~~viIiG~G~~G~~la~~L~~~------g~~v~vid~~~~ 41 (140)
T 3fwz_A 6 ICNHALLVGYGRVGSLLGEKLLAS------DIPLVVIETSRT 41 (140)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHT------TCCEEEEESCHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC------CCCEEEEECCHH
Confidence 345799999999999999999998 999999999864
No 340
>3i9v_3 NADH-quinone oxidoreductase subunit 3; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_3* 2fug_3* 3iam_3* 3ias_3* 3m9s_3*
Probab=93.97 E-value=0.014 Score=67.43 Aligned_cols=58 Identities=12% Similarity=-0.009 Sum_probs=43.2
Q ss_pred cEEecCCCCccccCCCCCCCCcceee----CCeeEEEecCCCCceeEEEecC----CcccCCCCcceeeeCCCCCceee
Q 006466 561 HLRLRDPKIPELVNLPEYAGPESRYC----PARVYEYVPDEKNQLKLQINAQ----NCLHCKDFQACDIKDPKQNIKWT 631 (644)
Q Consensus 561 h~~~~~~~~~~~~~~~~~~~~~~~~c----pa~~y~~~~~~~~~~~~~~~~~----~c~~c~~~~~c~~~~p~~~i~w~ 631 (644)
.|.+ |++.|+.|. -|+++| |.+++.+..... ...|+.. .|..|| .|.-.||+++|+-.
T Consensus 173 ~i~~-d~~~CI~C~------~Cv~~C~~~~~~~~i~~~~~g~---~~~i~~~~~~~~C~~CG---~Cv~vCP~gAl~~~ 238 (783)
T 3i9v_3 173 FVIL-DRERCIHCK------RCVRYFEEVPGDEVLDFIERGV---HTFIGTMDFGLPSGFSG---NITDICPVGALLDL 238 (783)
T ss_dssp TEEE-CTTTCCCCC------HHHHHHHHTTCCCCCEECSCTT---SCCEECSSTTCCSTTTT---THHHHCSSSSEEEG
T ss_pred cEEE-chhhCCCcc------HHHHHhhhhcCCceeeeecCCC---ccEEccCCCCCCCccch---hHHhhcccCceecc
Confidence 3554 889999987 799999 677777654322 2233333 799999 99999999999644
No 341
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=93.53 E-value=0.19 Score=53.60 Aligned_cols=55 Identities=20% Similarity=0.271 Sum_probs=39.2
Q ss_pred HHHHHHHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccccccceEEEcCEEEEecCCCCc
Q 006466 215 VRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 286 (644)
Q Consensus 215 ~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~~~g~~i~a~~vV~A~G~~s~ 286 (644)
.+.+.+..++.||++++++.|++++ + +.+ .+.+ .+|+ +.++.+|.||.|.|..+.
T Consensus 203 ~~~l~~~l~~~GV~~~~~~~v~~v~--~-~~~---~~~~----~~g~-------~~~i~~d~vi~~~G~~~~ 257 (430)
T 3hyw_A 203 KRLVEDLFAERNIDWIANVAVKAIE--P-DKV---IYED----LNGN-------THEVPAKFTMFMPSFQGP 257 (430)
T ss_dssp HHHHHHHHHHTTCEEECSCEEEEEC--S-SEE---EEEC----TTSC-------EEEEECSEEEEECEEECC
T ss_pred HHHHHHHHHhCCeEEEeCceEEEEe--C-Cce---EEEe----eCCC-------ceEeecceEEEeccCCCc
Confidence 4556777788999999999999874 2 222 2222 2232 468999999999997763
No 342
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=93.48 E-value=0.15 Score=45.71 Aligned_cols=33 Identities=15% Similarity=0.260 Sum_probs=30.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCC
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~ 146 (644)
..|+|+|+|..|...|..|.+. |.+|+++|+.+
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~------g~~V~vid~~~ 36 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQR------GQNVTVISNLP 36 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT------TCCEEEEECCC
T ss_pred CcEEEECCCHHHHHHHHHHHHC------CCCEEEEECCC
Confidence 4699999999999999999998 99999999974
No 343
>2ivf_B Ethylbenzene dehydrogenase beta-subunit; anaerobic hydrocarbon degradation, MOCO, Fe/S cluster, MO- B enzyme, DMSO reductase family; HET: MES MGD MD1 HEM; 1.88A {Aromatoleum aromaticum}
Probab=93.47 E-value=0.012 Score=60.85 Aligned_cols=54 Identities=17% Similarity=0.289 Sum_probs=42.4
Q ss_pred cCCCCccccCCCCCCCCcceeeCCeeEEEecCCCCceeEEEecCCcccCC------CCcceeeeCCCCCceee
Q 006466 565 RDPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQINAQNCLHCK------DFQACDIKDPKQNIKWT 631 (644)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~cpa~~y~~~~~~~~~~~~~~~~~~c~~c~------~~~~c~~~~p~~~i~w~ 631 (644)
.|.+.|+.|. .|+.+||.+++.+.+.. ++.+.|+.|+ .-..|...||+++|.+.
T Consensus 179 id~~kCigCg------~Cv~aCP~~Ai~~~~~~-------~~~~kC~~C~~r~~~g~~paCv~~CP~~Ai~~g 238 (352)
T 2ivf_B 179 VDQERCKGHR------HCVEACPYKAIYFNPVS-------QTSEKCILCYPRIEKGIANACNRQCPGRVRAFG 238 (352)
T ss_dssp ECTTTCCCCC------HHHHHCTTCCEEEETTT-------TEEEECCTTHHHHTTTBCCHHHHTCTTCCEEEE
T ss_pred echhhcCCch------HHHhhcCccceeccccc-------ccccccCCCcchhhcCCCChHHHhcCccceecc
Confidence 3778899876 79999999999987531 2467899992 11299999999999884
No 344
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=93.32 E-value=0.36 Score=53.12 Aligned_cols=36 Identities=14% Similarity=0.366 Sum_probs=32.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCC
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEV 148 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~ 148 (644)
...|+|||+|..|+..|..|++. +.+|+++++.+..
T Consensus 186 gk~V~VIG~G~sg~e~a~~l~~~------~~~vtv~~r~~~~ 221 (542)
T 1w4x_A 186 GQRVGVIGTGSSGIQVSPQIAKQ------AAELFVFQRTPHF 221 (542)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHH------BSEEEEEESSCCC
T ss_pred CCEEEEECCCccHHHHHHHHhhc------CceEEEEEcCCcc
Confidence 46799999999999999999999 9999999997653
No 345
>2vpz_B NRFC protein; oxidoreductase, molybdopterin guanine dinucleotide, iron-sulfur, metal-binding, molybdopterin; HET: MGD; 2.40A {Thermus thermophilus} PDB: 2vpx_B* 2vpw_B* 2vpy_B*
Probab=93.11 E-value=0.027 Score=53.35 Aligned_cols=61 Identities=20% Similarity=0.231 Sum_probs=44.3
Q ss_pred ecCCCCccccCCCCCCCCcceeeCCee-----------EEEecCCCCceeEEEecCCcccCCCCcceeeeCCCCCceee
Q 006466 564 LRDPKIPELVNLPEYAGPESRYCPARV-----------YEYVPDEKNQLKLQINAQNCLHCKDFQACDIKDPKQNIKWT 631 (644)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~cpa~~-----------y~~~~~~~~~~~~~~~~~~c~~c~~~~~c~~~~p~~~i~w~ 631 (644)
+.|.+.|+.|. .|+..||... ++...+......+.++...|++|++ -.|.-.||+++|.+.
T Consensus 7 ~iD~~~CigC~------~C~~aC~~~~~~~~~~~~~~v~~~~~g~~~~~~~~~~~~~C~~C~~-p~C~~~CP~gAi~~~ 78 (195)
T 2vpz_B 7 AIDLSLCVGCA------ACAVACKMENEVPPGVFNLWIREREVGEYPNLVVEFRPEQCLHCEN-PPCVPVCPTGASYQT 78 (195)
T ss_dssp EEETTTCCCCC------HHHHHHHHHTCCCTTCCSEEEEEEEECCTTSCEEEEEEEECCCCSS-CTTTTTCSSSCEEEC
T ss_pred EeeHHHCcChh------HHHHHhhHhhcCCCCCceeEEEECcCCCCCceeEEECcccCcCccC-cHHHHhcCCCceecc
Confidence 44889999987 7999999742 2222222223367889999999991 139999999999876
No 346
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=92.99 E-value=0.098 Score=45.70 Aligned_cols=33 Identities=18% Similarity=0.371 Sum_probs=30.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCC
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~ 146 (644)
..|+|||+|..|...|..|++. |.+|+++|+.+
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~------g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEK------GHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCeEEEEECCH
Confidence 4699999999999999999998 99999999864
No 347
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=92.82 E-value=0.091 Score=46.38 Aligned_cols=33 Identities=24% Similarity=0.467 Sum_probs=30.8
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCC
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~ 146 (644)
..|+|+|+|..|..+|..|++. |.+|+++|+.+
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~------g~~V~~id~~~ 39 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAA------GKKVLAVDKSK 39 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT------TCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHC------CCeEEEEECCH
Confidence 3699999999999999999999 99999999875
No 348
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=92.72 E-value=0.11 Score=43.90 Aligned_cols=33 Identities=33% Similarity=0.493 Sum_probs=30.3
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCC-CeEEEEcCCC
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVD-LSVCVVEKGA 146 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G-~~V~viEk~~ 146 (644)
..|+|+|+|..|..+|..|.+. | .+|+++++.+
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~------g~~~v~~~~r~~ 39 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTS------SNYSVTVADHDL 39 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHC------SSEEEEEEESCH
T ss_pred CeEEEECCCHHHHHHHHHHHhC------CCceEEEEeCCH
Confidence 4699999999999999999998 8 8999999875
No 349
>2pa8_D DNA-directed RNA polymerase subunit D; ferredoxin-like Fe-S binding motif, platform for RNA polymer assembly, transferase; 1.76A {Sulfolobus solfataricus} PDB: 2pmz_D 3hkz_D 2waq_D 2wb1_D 2y0s_D
Probab=92.27 E-value=0.031 Score=55.65 Aligned_cols=42 Identities=21% Similarity=0.374 Sum_probs=34.7
Q ss_pred CcceeeCCeeEEEecCCCCceeEEEecCCcccCCCCcceeeeCCCCCcee
Q 006466 581 PESRYCPARVYEYVPDEKNQLKLQINAQNCLHCKDFQACDIKDPKQNIKW 630 (644)
Q Consensus 581 ~~~~~cpa~~y~~~~~~~~~~~~~~~~~~c~~c~~~~~c~~~~p~~~i~w 630 (644)
.|...||.+++.+.++ . ...+|..+|..|+ .|...|| +.|..
T Consensus 178 ~C~~~CP~g~I~id~~---~-~v~~d~~~C~~C~---~C~~vCp-~aI~~ 219 (265)
T 2pa8_D 178 KAVNVCPEGVFELKDG---K-LSVKNELSCTLCE---ECLRYCN-GSIRI 219 (265)
T ss_dssp THHHHCTTCCEEEETT---E-EEESCGGGCCCCC---HHHHHHT-TSEEE
T ss_pred HHHHhCcccCeEecCC---e-eEEeccccCCCch---HHHHhCC-CceEE
Confidence 6899999999998653 1 3567889999999 9999999 77743
No 350
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=92.17 E-value=0.28 Score=54.81 Aligned_cols=57 Identities=9% Similarity=0.097 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHHhcCCEEecCceEEEEEEcCC-CcEEEEEeCcCccccCCCcccccccceEEEcCEEEEecC
Q 006466 211 LSQLVRWLGGKAEELGVEIYPGFAASEILYDAD-NKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEG 282 (644)
Q Consensus 211 r~~l~~~L~~~a~~~Gv~i~~g~~v~~v~~~~~-g~v~gV~~~d~g~~~~G~~~~~~~~g~~i~a~~vV~A~G 282 (644)
.+.|.+.|.+.++..|++|++++.|.+|..+++ |++++|++.+ |.+++||.||.+..
T Consensus 377 ~g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~---------------Ge~i~A~~VVs~~~ 434 (650)
T 1vg0_A 377 QGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQF---------------GQRIISKHFIIEDS 434 (650)
T ss_dssp TTHHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETT---------------SCEEECSEEEEEGG
T ss_pred hhHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCC---------------CCEEEcCEEEEChh
Confidence 578899999999999999999999999988765 7888888655 67899999988544
No 351
>1h0h_B Formate dehydrogenase (small subunit); tungsten selenium formate dehydrogenase, selenocysteine, molybdopterin, MGD, iron-sulphur cluster; HET: 2MD MGD EPE; 1.8A {Desulfovibrio gigas} SCOP: d.58.1.5
Probab=90.91 E-value=0.032 Score=53.68 Aligned_cols=56 Identities=20% Similarity=0.313 Sum_probs=43.8
Q ss_pred EEecCCCCcc--ccCCCCCCCCcceeeCCeeEEEecCCCCceeEEEecCCcccC------CCCcceeeeCCCCCceee
Q 006466 562 LRLRDPKIPE--LVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQINAQNCLHC------KDFQACDIKDPKQNIKWT 631 (644)
Q Consensus 562 ~~~~~~~~~~--~~~~~~~~~~~~~~cpa~~y~~~~~~~~~~~~~~~~~~c~~c------~~~~~c~~~~p~~~i~w~ 631 (644)
+.+ |.+.|+ .|. -|...||.+++.+.++. .+.+.|..| |.-..|...||+++|++.
T Consensus 101 v~i-d~~~C~~~~C~------~C~~~CP~~Ai~~~~~~-------~~~~kC~~C~~~~~~G~~p~Cv~~CP~~Ai~~~ 164 (214)
T 1h0h_B 101 VLF-TPKTKDLEDYE------SVISACPYDVPRKVAES-------NQMAKCDMCIDRITNGLRPACVTSCPTGAMNFG 164 (214)
T ss_dssp EEE-CGGGGGCSCHH------HHHHHCTTCCCEECTTS-------SCEECCCTTHHHHTTTCCCHHHHHCSSSCEEEE
T ss_pred EEE-eHHHCcccccc------HHHHhcCCCCeEecCCC-------cccCcCCCCcchhhcCCChhHHHhcCcccEEEc
Confidence 444 778898 886 69999999999986541 146789999 433489999999999885
No 352
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=90.84 E-value=0.2 Score=43.86 Aligned_cols=33 Identities=21% Similarity=0.302 Sum_probs=30.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCC
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~ 146 (644)
..|+|+|+|..|..+|..|.+. |.+|+++++.+
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~------g~~v~~~d~~~ 39 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRM------GHEVLAVDINE 39 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT------TCCCEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHHC------CCEEEEEeCCH
Confidence 3599999999999999999998 99999999864
No 353
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=90.81 E-value=0.22 Score=52.38 Aligned_cols=35 Identities=29% Similarity=0.430 Sum_probs=32.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCC
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~ 147 (644)
...|+|||+|.+|+.+|..|... |.+|+++|+.+.
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~l------Ga~V~v~D~~~~ 224 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRL------GAVVSATDVRPA 224 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSTT
T ss_pred CCEEEEECCcHHHHHHHHHHHHC------CCEEEEEcCCHH
Confidence 45799999999999999999999 999999999864
No 354
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=90.05 E-value=0.25 Score=51.45 Aligned_cols=35 Identities=26% Similarity=0.342 Sum_probs=32.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCC
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~ 147 (644)
...|+|||+|.+|+.+|..|... |.+|+++|+.+.
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~l------Ga~V~v~D~~~~ 218 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRL------GAKTTGYDVRPE 218 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHH------TCEEEEECSSGG
T ss_pred CCEEEEECchHHHHHHHHHHHHC------CCEEEEEeCCHH
Confidence 35799999999999999999999 999999999864
No 355
>1dwl_A Ferredoxin I; electron transfer, model, heteronuclear docking; HET: HEC; NMR {Desulfomicrobium norvegicum} SCOP: i.4.1.1
Probab=89.98 E-value=0.13 Score=37.55 Aligned_cols=26 Identities=19% Similarity=0.549 Sum_probs=22.5
Q ss_pred eEEEecCCcccCCCCcceeeeCCCCCceee
Q 006466 602 KLQINAQNCLHCKDFQACDIKDPKQNIKWT 631 (644)
Q Consensus 602 ~~~~~~~~c~~c~~~~~c~~~~p~~~i~w~ 631 (644)
++.||.+.|++|| .|...|| ..|.|.
T Consensus 1 ~i~i~~~~C~~C~---~C~~~Cp-~~~~~~ 26 (59)
T 1dwl_A 1 TIVIDHEECIGCE---SCVELCP-EVFAMI 26 (59)
T ss_dssp CEEESSCCCSSCC---GGGGTST-TTEEEE
T ss_pred CeEEChhhCcChh---HHHHHCC-HHheec
Confidence 3678999999999 9999999 578873
No 356
>1q16_B Respiratory nitrate reductase 1 beta chain; membrane protein, electron-transfer, oxidoreductase; HET: FME MD1 HEM AGA 3PH; 1.90A {Escherichia coli} SCOP: d.58.1.5 PDB: 1r27_B* 1siw_B* 1y5i_B* 1y5l_B* 1y5n_B* 3ir5_B* 3ir6_B* 3ir7_B* 1y4z_B* 3egw_B*
Probab=89.88 E-value=0.044 Score=59.25 Aligned_cols=54 Identities=11% Similarity=0.083 Sum_probs=42.9
Q ss_pred cCCCCccccCCCCCCCCcceeeCCeeEEEecCCCCceeEEEecCCcccCCCC------cceeeeCCCCCceee
Q 006466 565 RDPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQINAQNCLHCKDF------QACDIKDPKQNIKWT 631 (644)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~cpa~~y~~~~~~~~~~~~~~~~~~c~~c~~~------~~c~~~~p~~~i~w~ 631 (644)
.|++.|+.|. .|+..||.+++++..+. + ..+.|+.|++. -.|...||+++|.+.
T Consensus 212 id~~kCigCg------~Cv~~CP~~AI~~~~~~-~------~~~kC~~Cg~ri~~G~~P~Cv~~CP~~Ai~~g 271 (512)
T 1q16_B 212 IDQDKCRGWR------MCITGCPYKKIYFNWKS-G------KSEKCIFCYPRIEAGQPTVCSETCVGRIRYLG 271 (512)
T ss_dssp ECTTTCCCCC------CHHHHCTTCCEEEETTT-T------EEEECCTTHHHHTTTCCCHHHHTCTTCCEEEE
T ss_pred ECHHHCCCch------HHHhhCCccceecccCC-C------CcccCcCCCchhhcCCCCceEeeCchhhhhcc
Confidence 3788899987 79999999999987542 1 36789999722 289999999998775
No 357
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=89.77 E-value=0.22 Score=47.63 Aligned_cols=33 Identities=21% Similarity=0.352 Sum_probs=30.6
Q ss_pred cEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCC
Q 006466 109 DVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (644)
Q Consensus 109 DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~ 147 (644)
.|+|+|+|..|...|..|.+. |.+|+++|+.++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~------g~~v~vid~~~~ 34 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSR------KYGVVIINKDRE 34 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHT------TCCEEEEESCHH
T ss_pred EEEEECCCHHHHHHHHHHHhC------CCeEEEEECCHH
Confidence 599999999999999999998 999999998753
No 358
>1xer_A Ferredoxin; electron transport, iron-sulfur, duplication; 2.00A {Sulfolobus tokodaii str} SCOP: d.58.1.3 PDB: 2vkr_A
Probab=89.61 E-value=0.12 Score=43.09 Aligned_cols=28 Identities=14% Similarity=0.329 Sum_probs=25.9
Q ss_pred eEEEecCCcccCCCCcceeeeCCCCCceeeC
Q 006466 602 KLQINAQNCLHCKDFQACDIKDPKQNIKWTV 632 (644)
Q Consensus 602 ~~~~~~~~c~~c~~~~~c~~~~p~~~i~w~~ 632 (644)
.+.||.+.|+.|| .|...||.+.|.|..
T Consensus 37 ~~~id~~~C~~Cg---~C~~~CP~~ai~~~~ 64 (103)
T 1xer_A 37 IVGVDFDLCIADG---SCINACPVNVFQWYD 64 (103)
T ss_dssp SEEEETTTCCCCC---HHHHHCTTCCCEEEE
T ss_pred eEEEehhhCCChh---hHHHHcCccCeeccc
Confidence 6899999999999 999999999998865
No 359
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=89.58 E-value=0.31 Score=49.71 Aligned_cols=33 Identities=21% Similarity=0.395 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCC
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~ 146 (644)
..|.|||+|..|.+.|..|++. |.+|+++.|.+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~------g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKT------GHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHT------TCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhC------CCeEEEEeCCh
Confidence 4799999999999999999998 99999999864
No 360
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=89.45 E-value=2.1 Score=46.20 Aligned_cols=36 Identities=28% Similarity=0.266 Sum_probs=30.3
Q ss_pred CCCeEEEccCCcccCCCCCcchHHHHHHHHHHHHHHhccccC
Q 006466 414 FPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE 455 (644)
Q Consensus 414 ~~~v~LiGDAA~~~~P~~g~G~~~A~~sa~~lA~~l~~~l~~ 455 (644)
.+|++++|++.+ |.|++-|+.+|..+|+.|.+.+..
T Consensus 460 ~~~l~~aG~~~~------g~~v~gai~sG~~aA~~il~~l~~ 495 (504)
T 1sez_A 460 LPGLFYAGNHRG------GLSVGKALSSGCNAADLVISYLES 495 (504)
T ss_dssp STTEEECCSSSS------CSSHHHHHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEeecCC------CCCHHHHHHHHHHHHHHHHHHHhh
Confidence 479999999864 568999999999999999876543
No 361
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=89.40 E-value=0.34 Score=46.65 Aligned_cols=33 Identities=21% Similarity=0.263 Sum_probs=30.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCC
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKG 145 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~ 145 (644)
...|+|||||..|...|..|.+. |.+|+|+++.
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~------GA~VtVvap~ 63 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQE------GAAITVVAPT 63 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGG------CCCEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHC------CCEEEEECCC
Confidence 46799999999999999999999 9999999864
No 362
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=88.87 E-value=0.25 Score=53.20 Aligned_cols=52 Identities=25% Similarity=0.475 Sum_probs=41.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCC--------CCCcccccCccChHHHHH
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE--------VGAHIISGNVFEPRALNE 165 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~--------~g~~~~~g~~i~~~~l~~ 165 (644)
+.|+|+|+|-.|..+|..|... |.+|+|||+.++ ++.....|...++..|.+
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~------~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~ 63 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGE------NNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHE 63 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCST------TEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHC------CCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHh
Confidence 4699999999999999999998 999999999753 333445666666666643
No 363
>1dax_A Ferredoxin I; electron transport, electron-transfer protein, 4Fe-4S cluster; NMR {Desulfovibrio africanus} SCOP: d.58.1.4 PDB: 1dfd_A 1fxr_A
Probab=88.81 E-value=0.097 Score=39.24 Aligned_cols=26 Identities=19% Similarity=0.604 Sum_probs=23.2
Q ss_pred eEEEecCCcccCCCCcceeeeCCCCCceee
Q 006466 602 KLQINAQNCLHCKDFQACDIKDPKQNIKWT 631 (644)
Q Consensus 602 ~~~~~~~~c~~c~~~~~c~~~~p~~~i~w~ 631 (644)
++.||.+.|+.|| .|...|| +.|.+.
T Consensus 3 ~~~id~~~C~~Cg---~C~~~CP-~~~~~~ 28 (64)
T 1dax_A 3 KFYVDQDECIACE---SCVEIAP-GAFAMD 28 (64)
T ss_dssp CCEECSTTCCSCC---HHHHHCT-TTEEEC
T ss_pred EEEEccccCCCch---HHHHhCC-ccEeEc
Confidence 5789999999999 9999999 888764
No 364
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=88.67 E-value=0.36 Score=50.98 Aligned_cols=35 Identities=31% Similarity=0.403 Sum_probs=31.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCC
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~ 147 (644)
...|+|||+|.+|+.+|..|+.. |.+|+++|+.+.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~------Ga~V~v~D~~~~ 206 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSL------GAIVRAFDTRPE 206 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHHC------CCEEEEEcCCHH
Confidence 45799999999999999999998 999999998764
No 365
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=88.60 E-value=0.47 Score=48.24 Aligned_cols=33 Identities=18% Similarity=0.348 Sum_probs=30.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCC-eEEEEcCCC
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGA 146 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~-~V~viEk~~ 146 (644)
..|.|||+|..|.+.|..|++. |+ +|+++|+.+
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~------g~~~V~l~D~~~ 38 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKD------NLADVVLFDIAE 38 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCceEEEEeCCc
Confidence 4799999999999999999999 98 999999875
No 366
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=88.46 E-value=0.4 Score=52.47 Aligned_cols=36 Identities=11% Similarity=0.166 Sum_probs=33.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCC
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVG 149 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g 149 (644)
..|+|||||..|+.+|..|++. |.+|+++|+.+.+.
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~------G~~Vtlv~~~~~~l 250 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNAT------GRRTVMLVRTEPLK 250 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCTTT
T ss_pred CeEEEECCCHHHHHHHHHHHHc------CCeEEEEEecCccc
Confidence 5799999999999999999999 99999999987653
No 367
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=88.44 E-value=0.42 Score=50.08 Aligned_cols=35 Identities=31% Similarity=0.400 Sum_probs=31.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCC
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~ 147 (644)
...|+|+|+|.+|+.+|..|+.. |.+|+++|+.+.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~------Ga~V~~~d~~~~ 206 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRL------GAVVMATDVRAA 206 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCST
T ss_pred CCEEEEECCCHHHHHHHHHHHHC------CCEEEEEeCCHH
Confidence 45799999999999999999998 999999998764
No 368
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=88.26 E-value=0.43 Score=48.47 Aligned_cols=33 Identities=18% Similarity=0.365 Sum_probs=30.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCC--eEEEEcCCC
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDL--SVCVVEKGA 146 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~--~V~viEk~~ 146 (644)
..|+|||+|..|...|..|++. |. +|+++++..
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~------g~~~~V~l~d~~~ 42 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQR------GIAREIVLEDIAK 42 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCCEEEEEeCCh
Confidence 4799999999999999999998 88 999999864
No 369
>3eun_A Ferredoxin; electron transport, [4Fe-4S] cluster, 4Fe-4S, iron, iron-sulfur, metal-binding, transport; 1.05A {Allochromatium vinosum} SCOP: d.58.1.1 PDB: 1blu_A 3exy_A
Probab=88.26 E-value=0.19 Score=39.89 Aligned_cols=25 Identities=20% Similarity=0.602 Sum_probs=22.4
Q ss_pred EEecCCcccCCCCcceeeeCCCCCceee
Q 006466 604 QINAQNCLHCKDFQACDIKDPKQNIKWT 631 (644)
Q Consensus 604 ~~~~~~c~~c~~~~~c~~~~p~~~i~w~ 631 (644)
.++.+.|+.|| .|...||++.|.+.
T Consensus 2 ~~~~~~C~~C~---~C~~~CP~~ai~~~ 26 (82)
T 3eun_A 2 LMITDECINCD---VCEPECPNGAISQG 26 (82)
T ss_dssp EEECTTCCCCC---TTGGGCTTCCEEEC
T ss_pred eEeCCCCcCcc---chHHHCChhheEcC
Confidence 47889999999 99999999999873
No 370
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=88.06 E-value=0.36 Score=49.02 Aligned_cols=33 Identities=27% Similarity=0.348 Sum_probs=30.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCC
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~ 146 (644)
..|.|||+|-.|.+.|..|++. |.+|+++.|..
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~------g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRS------GEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHT------SCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHC------CCeEEEEEcCc
Confidence 5799999999999999999998 99999999864
No 371
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=87.87 E-value=0.59 Score=47.91 Aligned_cols=34 Identities=18% Similarity=0.211 Sum_probs=31.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCC-eEEEEcCCCC
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGAE 147 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~-~V~viEk~~~ 147 (644)
..|.|||+|..|.+.|..|++. |+ +|+++|..++
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~------g~~~V~L~D~~~~ 44 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALR------ELADVVLYDVVKG 44 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCCEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCeEEEEECChh
Confidence 4799999999999999999998 88 9999998753
No 372
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=87.85 E-value=0.45 Score=47.50 Aligned_cols=34 Identities=18% Similarity=0.309 Sum_probs=31.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCC
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~ 147 (644)
..|.|||+|..|...|..|++. |++|+++|+.++
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~------G~~V~l~d~~~~ 38 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFH------GFAVTAYDINTD 38 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCeEEEEeCCHH
Confidence 3699999999999999999999 999999998753
No 373
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=87.74 E-value=0.33 Score=51.90 Aligned_cols=35 Identities=26% Similarity=0.304 Sum_probs=31.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCC
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEV 148 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~ 148 (644)
..|+|||.|.+|+++|..|+++ |.+|++.|.+...
T Consensus 6 ~~v~viG~G~~G~~~a~~l~~~------G~~v~~~D~~~~~ 40 (439)
T 2x5o_A 6 KNVVIIGLGLTGLSCVDFFLAR------GVTPRVMDTRMTP 40 (439)
T ss_dssp CCEEEECCHHHHHHHHHHHHTT------TCCCEEEESSSSC
T ss_pred CEEEEEeecHHHHHHHHHHHhC------CCEEEEEECCCCc
Confidence 4699999999999999999998 9999999987643
No 374
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=87.68 E-value=0.29 Score=48.63 Aligned_cols=34 Identities=18% Similarity=0.379 Sum_probs=30.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCC
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~ 146 (644)
...|+|||||..|+..|..|.+. |.+|+|+++..
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~------Ga~VtViap~~ 46 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPT------GCKLTLVSPDL 46 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGG------TCEEEEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHhC------CCEEEEEcCCC
Confidence 45799999999999999999999 99999998753
No 375
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=87.67 E-value=0.48 Score=51.42 Aligned_cols=60 Identities=15% Similarity=0.123 Sum_probs=45.1
Q ss_pred HHHHhcCCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccccccceEEEcCEEEEecCCCCcchHHHHHHcCCC
Q 006466 220 GKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLR 298 (644)
Q Consensus 220 ~~a~~~Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~~~g~~i~a~~vV~A~G~~s~l~~~l~~~~~~~ 298 (644)
+.+++.||+|++++.|+++..++ .+.+|.+.+ |.++.+|.||+|.|.++.. ++.+..++.
T Consensus 265 ~~l~~~GV~v~~~~~v~~i~~~~--~v~~v~~~~---------------g~~i~aD~Vv~a~G~~p~~--~l~~~~g~~ 324 (493)
T 1y56_A 265 QELERWGIDYVHIPNVKRVEGNE--KVERVIDMN---------------NHEYKVDALIFADGRRPDI--NPITQAGGK 324 (493)
T ss_dssp HHHHHHTCEEEECSSEEEEECSS--SCCEEEETT---------------CCEEECSEEEECCCEEECC--HHHHHTTCC
T ss_pred HHHHhCCcEEEeCCeeEEEecCC--ceEEEEeCC---------------CeEEEeCEEEECCCcCcCc--hHHHhcCCC
Confidence 66778899999999999997543 355677655 6789999999999988753 344555544
No 376
>1jb0_C Photosystem I iron-sulfur center; membrane protein, multiprotein-pigment complex, photosynthes; HET: CL1 PQN BCR LHG LMG; 2.50A {Synechococcus elongatus} SCOP: d.58.1.2 PDB: 3pcq_C* 1k0t_A 2wsc_C* 2wse_C* 2wsf_C* 3lw5_C* 2o01_C*
Probab=87.61 E-value=0.2 Score=39.29 Aligned_cols=28 Identities=14% Similarity=0.318 Sum_probs=24.7
Q ss_pred eEEEecCCcccCCCCcceeeeCCCCCceeeC
Q 006466 602 KLQINAQNCLHCKDFQACDIKDPKQNIKWTV 632 (644)
Q Consensus 602 ~~~~~~~~c~~c~~~~~c~~~~p~~~i~w~~ 632 (644)
++.++.+.|+.|| .|...||.+.|....
T Consensus 2 ~~~~~~~~C~~Cg---~C~~~CP~~a~~~~~ 29 (80)
T 1jb0_C 2 HTVKIYDTCIGCT---QCVRACPTDVLEMVP 29 (80)
T ss_dssp CEEEEETTCCCCC---HHHHHCTTCCCEEEE
T ss_pred CCcccCCcCcChh---HHHHHCCcccccccc
Confidence 4678899999999 999999999998764
No 377
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=87.48 E-value=5.1 Score=45.03 Aligned_cols=37 Identities=19% Similarity=-0.019 Sum_probs=30.0
Q ss_pred CCeEEEccCCcccCCCCCcchHHHHHHHHHHHHHHhcccc
Q 006466 415 PGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLH 454 (644)
Q Consensus 415 ~~v~LiGDAA~~~~P~~g~G~~~A~~sa~~lA~~l~~~l~ 454 (644)
+|++++|++.+... ..-++-|+++|..+|+.|.+.+.
T Consensus 623 grl~FAGe~ts~~~---~g~v~GAi~SG~raA~~i~~~~~ 659 (662)
T 2z3y_A 623 PRLFFAGEHTIRNY---PATVHGALLSGLREAGRIADQFL 659 (662)
T ss_dssp CCEEECSGGGCTTS---TTSHHHHHHHHHHHHHHHHHHHT
T ss_pred CcEEEEeccccCCC---CcCHHHHHHHHHHHHHHHHHHcc
Confidence 69999999977432 34689999999999999987653
No 378
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=87.38 E-value=0.62 Score=49.32 Aligned_cols=34 Identities=21% Similarity=0.322 Sum_probs=31.5
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCC
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~ 147 (644)
..|||||.|..|...|..|.+. |++|++||+.+.
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~------g~~vvvId~d~~ 38 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSS------GVKMVVLDHDPD 38 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT------TCCEEEEECCHH
T ss_pred CeEEEECCCHHHHHHHHHHHHC------CCCEEEEECCHH
Confidence 4699999999999999999999 999999999864
No 379
>1iqz_A Ferredoxin; iron-sulfer protein, ultlahigh resolution analysis, geometry of [4Fe-4S] cluster, electron transport; 0.92A {Bacillus thermoproteolyticus} SCOP: d.58.1.4 PDB: 1ir0_A 1wtf_A*
Probab=87.25 E-value=0.18 Score=39.96 Aligned_cols=26 Identities=19% Similarity=0.613 Sum_probs=23.2
Q ss_pred eEEEecCCcccCCCCcceeeeCCCCCceee
Q 006466 602 KLQINAQNCLHCKDFQACDIKDPKQNIKWT 631 (644)
Q Consensus 602 ~~~~~~~~c~~c~~~~~c~~~~p~~~i~w~ 631 (644)
++.||.+.|+.|| .|...|| +.+.+.
T Consensus 3 ~v~vd~~~CigCg---~C~~~CP-~~~~~~ 28 (81)
T 1iqz_A 3 YTIVDKETCIACG---ACGAAAP-DIYDYD 28 (81)
T ss_dssp EEEECTTTCCCCS---HHHHHCT-TTEEEC
T ss_pred EEEEecccCcccC---hhhHhCc-hheeeC
Confidence 6889999999999 9999999 777764
No 380
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=87.18 E-value=0.45 Score=47.77 Aligned_cols=33 Identities=27% Similarity=0.405 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCC
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~ 146 (644)
..|.|||+|--|.+.|..|++. |.+|++++|..
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~------g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQS------LPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH------CTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHC------CCeEEEEEecc
Confidence 4799999999999999999999 99999999874
No 381
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=87.04 E-value=0.39 Score=51.49 Aligned_cols=34 Identities=26% Similarity=0.301 Sum_probs=31.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCC
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~ 146 (644)
...|+|||.|.+|+++|..|+++ |.+|++.|++.
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~------G~~V~~~D~~~ 42 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKL------GAIVTVNDGKP 42 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHT------TCEEEEEESSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC------CCEEEEEeCCc
Confidence 35799999999999999999999 99999999875
No 382
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=86.96 E-value=0.53 Score=48.89 Aligned_cols=33 Identities=30% Similarity=0.326 Sum_probs=30.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCC
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~ 146 (644)
..|+|+|+|.+|+.+|..|+.. |.+|+++++.+
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~------Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGL------GAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCEEEEEeCCH
Confidence 5799999999999999999998 99999999875
No 383
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=86.87 E-value=0.49 Score=48.13 Aligned_cols=34 Identities=29% Similarity=0.317 Sum_probs=31.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCC
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~ 147 (644)
-.|.|||+|.-|..-|..+++. |++|+++|..++
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~------G~~V~l~D~~~~ 40 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASG------GFRVKLYDIEPR 40 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCEEEECSCHH
T ss_pred CeEEEECCcHHHHHHHHHHHhC------CCeEEEEECCHH
Confidence 3699999999999999999999 999999998753
No 384
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=86.83 E-value=0.62 Score=45.61 Aligned_cols=34 Identities=24% Similarity=0.351 Sum_probs=31.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCC-eEEEEcCCC
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGA 146 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~-~V~viEk~~ 146 (644)
...|+|||+|..|..+|..|++. |+ +++|+|+..
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~------Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASA------GVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHH------TCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHc------CCCeEEEEcCCC
Confidence 46799999999999999999999 98 899999864
No 385
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=86.72 E-value=0.6 Score=48.57 Aligned_cols=35 Identities=34% Similarity=0.416 Sum_probs=31.9
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCC-eEEEEcCCC
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGA 146 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~-~V~viEk~~ 146 (644)
.+..|||+|||.||..+|..|... |. +|+++|+..
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~------Ga~~I~v~D~~G 222 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAA------GATKVTVVDKFG 222 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHH------TCCEEEEEETTE
T ss_pred CccEEEEECCCHHHHHHHHHHHHc------CCCeEEEEECCC
Confidence 357899999999999999999999 99 999999874
No 386
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=86.63 E-value=0.51 Score=50.59 Aligned_cols=34 Identities=26% Similarity=0.478 Sum_probs=31.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCC
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~ 147 (644)
..|.|||+|..|+..|..|++. |.+|+++++.+.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~------G~~V~~~D~~~~ 36 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAEL------GANVRCIDTDRN 36 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCHH
T ss_pred CEEEEECcCHHHHHHHHHHHhc------CCEEEEEECCHH
Confidence 4699999999999999999999 999999998764
No 387
>1sj1_A Ferredoxin; thermostability, iron-sulfur cluster, hexammine cobalt(III), electron transport; HET: NCO; 1.50A {Pyrococcus furiosus} SCOP: d.58.1.4 PDB: 1siz_A* 2z8q_A 3pni_A
Probab=86.36 E-value=0.24 Score=37.05 Aligned_cols=26 Identities=15% Similarity=0.410 Sum_probs=23.2
Q ss_pred eEEEecCCcccCCCCcceeeeCCCCCceee
Q 006466 602 KLQINAQNCLHCKDFQACDIKDPKQNIKWT 631 (644)
Q Consensus 602 ~~~~~~~~c~~c~~~~~c~~~~p~~~i~w~ 631 (644)
++.||.+.|+.|| .|...||. .|.+.
T Consensus 3 ~~~id~~~C~~C~---~C~~~Cp~-~~~~~ 28 (66)
T 1sj1_A 3 KVSVDQDTCIGDA---ICASLCPD-VFEMN 28 (66)
T ss_dssp EEEECTTTCCCCC---HHHHHCTT-TEEEC
T ss_pred EEEECcccCcCch---HHHHhCCc-eEEEC
Confidence 6889999999999 99999994 88774
No 388
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=86.18 E-value=0.71 Score=45.79 Aligned_cols=33 Identities=15% Similarity=0.117 Sum_probs=30.4
Q ss_pred cEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCC
Q 006466 109 DVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (644)
Q Consensus 109 DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~ 147 (644)
.|.|||+|..|...|..|++. |.+|+++++.+.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~------g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQ------GHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhC------CCCEEEEEcCcc
Confidence 489999999999999999998 999999998764
No 389
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=86.16 E-value=0.73 Score=47.13 Aligned_cols=34 Identities=32% Similarity=0.423 Sum_probs=30.9
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCC-eEEEEcCCCC
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGAE 147 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~-~V~viEk~~~ 147 (644)
..|.|||+|..|.+.|..|++. |+ +|+++|...+
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~------g~~~V~L~Di~~~ 49 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQK------DLGDVYMFDIIEG 49 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCEEEEECSSTT
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCeEEEEECCHH
Confidence 5799999999999999999998 88 9999998753
No 390
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=86.15 E-value=0.78 Score=43.50 Aligned_cols=35 Identities=14% Similarity=0.231 Sum_probs=31.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCC
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~ 147 (644)
...|.|||+|-.|.+.|..|++. |.+|+++++.++
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~------g~~V~~~~~~~~ 53 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIA------GHEVTYYGSKDQ 53 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT------TCEEEEECTTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHC------CCEEEEEcCCHH
Confidence 34699999999999999999998 999999998764
No 391
>2zvs_A Uncharacterized ferredoxin-like protein YFHL; electron transport, [4Fe-4S] clusters, iron-SULF clusters, reduction potential; 1.65A {Escherichia coli}
Probab=85.85 E-value=0.25 Score=39.43 Aligned_cols=25 Identities=20% Similarity=0.660 Sum_probs=22.1
Q ss_pred EEecCCcccCCCCcceeeeCCCCCceee
Q 006466 604 QINAQNCLHCKDFQACDIKDPKQNIKWT 631 (644)
Q Consensus 604 ~~~~~~c~~c~~~~~c~~~~p~~~i~w~ 631 (644)
.++.+.|+.|| .|...||+++|.+.
T Consensus 2 ~~~~~~C~~C~---~C~~~CP~~ai~~~ 26 (85)
T 2zvs_A 2 LLITKKCINCD---MCEPECPNEAISMG 26 (85)
T ss_dssp EEECTTCCCCC---TTTTTCTTCCEECC
T ss_pred EEeCCcCcChh---HHHHHCchhccCcC
Confidence 36778999999 99999999999874
No 392
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=85.84 E-value=0.63 Score=46.91 Aligned_cols=34 Identities=29% Similarity=0.359 Sum_probs=31.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCC
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~ 146 (644)
...|.|||.|..|...|..|++. |.+|+++++.+
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~------G~~V~~~dr~~ 40 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRA------GLSTWGADLNP 40 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHC------CCeEEEEECCH
Confidence 35799999999999999999999 99999999875
No 393
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=85.53 E-value=0.85 Score=41.96 Aligned_cols=35 Identities=23% Similarity=0.192 Sum_probs=29.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCC
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~ 146 (644)
...|+|+|+|..|..+|..|.+.. |.+|+++|+.+
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~-----g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARY-----GKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHH-----CSCEEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHhcc-----CCeEEEEECCH
Confidence 346999999999999999998731 78999999875
No 394
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=85.53 E-value=0.74 Score=47.34 Aligned_cols=33 Identities=24% Similarity=0.202 Sum_probs=30.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCC
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~ 146 (644)
..|.|||+|..|...|..|++. |.+|+++++.+
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~------g~~V~~~~r~~ 37 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALK------GQSVLAWDIDA 37 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHhC------CCEEEEEeCCH
Confidence 4799999999999999999998 99999999864
No 395
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=85.50 E-value=0.75 Score=46.29 Aligned_cols=32 Identities=22% Similarity=0.340 Sum_probs=30.2
Q ss_pred cEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCC
Q 006466 109 DVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (644)
Q Consensus 109 DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~ 146 (644)
.|.|||+|..|...|..|++. |++|+++|+.+
T Consensus 17 ~I~VIG~G~mG~~iA~~la~~------G~~V~~~d~~~ 48 (302)
T 1f0y_A 17 HVTVIGGGLMGAGIAQVAAAT------GHTVVLVDQTE 48 (302)
T ss_dssp EEEEECCSHHHHHHHHHHHHT------TCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHhC------CCeEEEEECCH
Confidence 599999999999999999998 99999999875
No 396
>2fdn_A Ferredoxin; electron transport, iron-sulfur, 4Fe-4S; 0.94A {Clostridium acidurici} SCOP: d.58.1.1 PDB: 1fdn_A 1fca_A 1clf_A 1dur_A
Probab=85.44 E-value=0.32 Score=35.03 Aligned_cols=25 Identities=28% Similarity=0.615 Sum_probs=21.5
Q ss_pred EEEecCCcccCCCCcceeeeCCCCCceee
Q 006466 603 LQINAQNCLHCKDFQACDIKDPKQNIKWT 631 (644)
Q Consensus 603 ~~~~~~~c~~c~~~~~c~~~~p~~~i~w~ 631 (644)
+.| .+.|++|| .|.-.||.+.|.+.
T Consensus 2 ~~i-~~~C~~C~---~C~~~CP~~ai~~~ 26 (55)
T 2fdn_A 2 YVI-NEACISCG---ACEPECPVNAISSG 26 (55)
T ss_dssp EEE-CTTCCCCC---TTGGGCTTCCEECC
T ss_pred eEe-cccCcChh---hHHHHCCccccCcC
Confidence 345 78999999 99999999999764
No 397
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=85.43 E-value=0.88 Score=46.40 Aligned_cols=33 Identities=27% Similarity=0.333 Sum_probs=30.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCC-eEEEEcCCC
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGA 146 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~-~V~viEk~~ 146 (644)
..|.|||+|..|...|..|++. |+ +|+++|...
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~------g~~~v~L~Di~~ 38 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQK------NLGDVVLFDIVK 38 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCeEEEEeCCH
Confidence 4699999999999999999998 88 999999875
No 398
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=85.29 E-value=0.86 Score=46.16 Aligned_cols=33 Identities=24% Similarity=0.377 Sum_probs=29.8
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCC-eEEEEcCCC
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGA 146 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~-~V~viEk~~ 146 (644)
..|.|||+|..|...|..|+.. |. +|+++|...
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~------g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAK------ELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHC------CCCeEEEEeCCc
Confidence 4699999999999999999998 86 899999865
No 399
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=85.25 E-value=0.78 Score=46.07 Aligned_cols=32 Identities=28% Similarity=0.394 Sum_probs=30.0
Q ss_pred cEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCC
Q 006466 109 DVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (644)
Q Consensus 109 DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~ 146 (644)
.|.|||+|..|...|..|++. |.+|+++++.+
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~------g~~V~~~~r~~ 36 (316)
T 2ew2_A 5 KIAIAGAGAMGSRLGIMLHQG------GNDVTLIDQWP 36 (316)
T ss_dssp EEEEECCSHHHHHHHHHHHHT------TCEEEEECSCH
T ss_pred eEEEECcCHHHHHHHHHHHhC------CCcEEEEECCH
Confidence 699999999999999999998 99999999864
No 400
>2fgo_A Ferredoxin; allochromatium vinosum, [4Fe-4S] cluster, reduction potential, iron binding protein electron transport; 1.32A {Pseudomonas aeruginosa}
Probab=85.12 E-value=0.25 Score=39.07 Aligned_cols=24 Identities=21% Similarity=0.603 Sum_probs=21.7
Q ss_pred EecCCcccCCCCcceeeeCCCCCceee
Q 006466 605 INAQNCLHCKDFQACDIKDPKQNIKWT 631 (644)
Q Consensus 605 ~~~~~c~~c~~~~~c~~~~p~~~i~w~ 631 (644)
++.+.|+.|| .|...||+++|.+.
T Consensus 3 ~~~~~C~~C~---~C~~~CP~~ai~~~ 26 (82)
T 2fgo_A 3 KITDDCINCD---VCEPECPNGAISQG 26 (82)
T ss_dssp CCCTTCCCCC---TTGGGCTTCCEEEC
T ss_pred eeCCCCCChh---hHHHHCChhccCCC
Confidence 5678999999 99999999999874
No 401
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=85.10 E-value=0.8 Score=46.27 Aligned_cols=32 Identities=34% Similarity=0.475 Sum_probs=29.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCC
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~ 146 (644)
..|.|||+|-.|.+.|..|+ . |.+|+++.|.+
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~------g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-L------YHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-T------TSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-c------CCceEEEECCH
Confidence 57999999999999999999 8 99999999875
No 402
>1rgv_A Ferredoxin; electron transport; 2.90A {Thauera aromatica} SCOP: d.58.1.1
Probab=84.92 E-value=0.22 Score=39.26 Aligned_cols=24 Identities=25% Similarity=0.484 Sum_probs=21.5
Q ss_pred EecCCcccCCCCcceeeeCCCCCceee
Q 006466 605 INAQNCLHCKDFQACDIKDPKQNIKWT 631 (644)
Q Consensus 605 ~~~~~c~~c~~~~~c~~~~p~~~i~w~ 631 (644)
++.+.|++|| .|...||+++|.+.
T Consensus 3 ~~~~~C~~C~---~C~~~CP~~ai~~~ 26 (80)
T 1rgv_A 3 YINDDCTACD---ACVEECPNEAITPG 26 (80)
T ss_dssp CCCSCCCCCC---TTTTTCTTCCEECC
T ss_pred EeCCCCcChh---hHHHHcChhccCcC
Confidence 5678999999 99999999999874
No 403
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=84.81 E-value=0.89 Score=46.24 Aligned_cols=34 Identities=26% Similarity=0.337 Sum_probs=30.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCC--eEEEEcCCC
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDL--SVCVVEKGA 146 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~--~V~viEk~~ 146 (644)
...|.|||+|..|.++|..|+.. ++ .|+++|...
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~------~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALR------QTANELVLIDVFK 42 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT------TCSSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCCCEEEEEeCCh
Confidence 36899999999999999999998 77 899999875
No 404
>1kqf_B FDH-N beta S, formate dehydrogenase, nitrate-inducible, iron-SU subunit; oxidoreductase, selenium, selenocysteine, seCys, molybdenum; HET: MGD HEM CDL; 1.60A {Escherichia coli} SCOP: d.58.1.5 f.23.22.1 PDB: 1kqg_B*
Probab=84.72 E-value=0.22 Score=50.25 Aligned_cols=53 Identities=19% Similarity=0.246 Sum_probs=40.9
Q ss_pred CCCCccccCCCCCCCCcceeeCCeeEEEecCCCCceeEEEecCCcccCCC------CcceeeeCCCCCceee
Q 006466 566 DPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQINAQNCLHCKD------FQACDIKDPKQNIKWT 631 (644)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~cpa~~y~~~~~~~~~~~~~~~~~~c~~c~~------~~~c~~~~p~~~i~w~ 631 (644)
|.+.|+.|. -|...||.+++.+.++. + ....|..|++ -..|...||+++|.+.
T Consensus 129 d~~~CigCg------~C~~~CP~~ai~~~~~~-~------~~~kC~~C~~r~~~g~~p~Cv~~CP~~Ai~~~ 187 (294)
T 1kqf_B 129 QSENCIGCG------YCIAGCPFNIPRLNKED-N------RVYKCTLCVDRVSVGQEPACVKTCPTGAIHFG 187 (294)
T ss_dssp CGGGCCCCC------HHHHHCTTCCCEEETTT-T------EEECCCTTHHHHTTTCCCHHHHHCTTSCEEEE
T ss_pred CcccCCCcc------hhhhcCCCCCcEecCCC-C------CeeeCCCccchhhcCccHHHHHhCCcCcEEEe
Confidence 778898886 69999999999886531 1 2347999852 2289999999999875
No 405
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=84.56 E-value=1.2 Score=48.50 Aligned_cols=37 Identities=22% Similarity=0.302 Sum_probs=33.9
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCC
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEV 148 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~ 148 (644)
.++||+|||+|++|+++|..|++. |.+|+|||++...
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~------~~~v~~~e~~~~~ 40 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEA------GVQTLMLEMGQLW 40 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESSCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC------CCcEEEEeCCCCC
Confidence 368999999999999999999998 9999999998743
No 406
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=84.45 E-value=0.84 Score=47.49 Aligned_cols=34 Identities=26% Similarity=0.370 Sum_probs=30.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCC
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~ 146 (644)
...|+|+|+|..|+.+|..|+.. |.+|+++++.+
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~------Ga~V~~~d~~~ 199 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGM------GAQVTILDVNH 199 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCEEEEEECCH
Confidence 35799999999999999999998 99999999865
No 407
>1rof_A Ferredoxin; electron transport, iron-sulfur; NMR {Thermotoga maritima} SCOP: d.58.1.4 PDB: 1vjw_A
Probab=84.42 E-value=0.26 Score=36.04 Aligned_cols=25 Identities=24% Similarity=0.693 Sum_probs=21.5
Q ss_pred eEEEecCCcccCCCCcceeeeCCCCCcee
Q 006466 602 KLQINAQNCLHCKDFQACDIKDPKQNIKW 630 (644)
Q Consensus 602 ~~~~~~~~c~~c~~~~~c~~~~p~~~i~w 630 (644)
++.||.+.|+.|| .|...||. .|.+
T Consensus 2 ~~~i~~~~C~~C~---~C~~~Cp~-~~~~ 26 (60)
T 1rof_A 2 KVRVDADACIGCG---VCENLCPD-VFQL 26 (60)
T ss_dssp CSEECTTTCCSCC---SSTTTCTT-TBCC
T ss_pred EEEEchhhCCCCh---HHHHhCcH-HHeE
Confidence 4678999999999 99999996 6654
No 408
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=84.36 E-value=0.92 Score=47.12 Aligned_cols=35 Identities=29% Similarity=0.411 Sum_probs=31.7
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCC-eEEEEcCCC
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGA 146 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~-~V~viEk~~ 146 (644)
.+..|||+|||-+|..+|..|... |. +|+++|+..
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~------G~~~I~v~Dr~G 226 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDL------GVKNVVAVDRKG 226 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHH------TCCEEEEEETTE
T ss_pred CCcEEEEECCCHHHHHHHHHHHhC------CCCeEEEEECCC
Confidence 457899999999999999999999 88 899999873
No 409
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=84.24 E-value=0.89 Score=46.52 Aligned_cols=32 Identities=31% Similarity=0.447 Sum_probs=29.8
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCC
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKG 145 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~ 145 (644)
..|.|||+|-.|.+.|..|++. |.+|+++++.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~------g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALA------GEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHT------TCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHC------CCEEEEEECh
Confidence 4799999999999999999999 9999999974
No 410
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=84.12 E-value=0.93 Score=46.33 Aligned_cols=36 Identities=22% Similarity=0.238 Sum_probs=31.7
Q ss_pred cccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCC
Q 006466 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (644)
Q Consensus 105 ~~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~ 146 (644)
.|+..|.|||+|.-|.+.|..|++. |.+|+++++.+
T Consensus 12 ~~~~kI~iIG~G~mG~ala~~L~~~------G~~V~~~~r~~ 47 (335)
T 1z82_A 12 HMEMRFFVLGAGSWGTVFAQMLHEN------GEEVILWARRK 47 (335)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSH
T ss_pred ccCCcEEEECcCHHHHHHHHHHHhC------CCeEEEEeCCH
Confidence 4567899999999999999999999 99999999864
No 411
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=84.04 E-value=0.41 Score=42.36 Aligned_cols=34 Identities=18% Similarity=0.225 Sum_probs=30.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCC
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~ 146 (644)
...|+|||+|..|...|..|++. |.+|+++++..
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~------g~~v~v~~r~~ 54 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYP------QYKVTVAGRNI 54 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTT------TCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCEEEEEcCCH
Confidence 45799999999999999999887 99999999875
No 412
>1f2g_A Ferredoxin II; electron transport, FDII desulfovibrio gigas; NMR {Desulfovibrio gigas} SCOP: d.58.1.4 PDB: 1fxd_A
Probab=83.94 E-value=0.16 Score=37.14 Aligned_cols=23 Identities=26% Similarity=0.736 Sum_probs=20.1
Q ss_pred EEEecCCcccCCCCcceeeeCCCCCcee
Q 006466 603 LQINAQNCLHCKDFQACDIKDPKQNIKW 630 (644)
Q Consensus 603 ~~~~~~~c~~c~~~~~c~~~~p~~~i~w 630 (644)
+.|| +.|++|| .|...||. +|.+
T Consensus 2 v~id-~~C~~C~---~C~~~CP~-~~~~ 24 (58)
T 1f2g_A 2 IEVN-DDCMACE---ACVEICPD-VFEM 24 (58)
T ss_dssp CBCT-TTCCCCC---HHHHHCTT-TEEE
T ss_pred cEEC-CcCccch---HHHHhCCc-cEEE
Confidence 5688 9999999 99999997 7765
No 413
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=83.92 E-value=0.91 Score=47.38 Aligned_cols=34 Identities=35% Similarity=0.506 Sum_probs=31.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCC
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~ 146 (644)
...|+|||+|..|+.+|..|+.. |.+|+++++.+
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~------Ga~V~~~d~~~ 201 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGM------GATVTVLDINI 201 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCEEEEEeCCH
Confidence 45799999999999999999998 99999999865
No 414
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=83.64 E-value=0.69 Score=46.46 Aligned_cols=36 Identities=22% Similarity=0.261 Sum_probs=32.4
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCC
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~ 147 (644)
+...|.|||.|..|...|..|++. |++|+++++.+.
T Consensus 14 ~~~~I~vIG~G~mG~~~A~~l~~~------G~~V~~~dr~~~ 49 (296)
T 3qha_A 14 EQLKLGYIGLGNMGAPMATRMTEW------PGGVTVYDIRIE 49 (296)
T ss_dssp -CCCEEEECCSTTHHHHHHHHTTS------TTCEEEECSSTT
T ss_pred CCCeEEEECcCHHHHHHHHHHHHC------CCeEEEEeCCHH
Confidence 346799999999999999999999 999999999875
No 415
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=83.46 E-value=0.99 Score=48.72 Aligned_cols=34 Identities=21% Similarity=0.439 Sum_probs=31.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCC
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~ 147 (644)
..|.|||+|..|+..|..|++. |.+|+++++.+.
T Consensus 9 ~~I~VIG~G~vG~~lA~~la~~------G~~V~~~d~~~~ 42 (478)
T 2y0c_A 9 MNLTIIGSGSVGLVTGACLADI------GHDVFCLDVDQA 42 (478)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCHH
T ss_pred ceEEEECcCHHHHHHHHHHHhC------CCEEEEEECCHH
Confidence 5799999999999999999999 999999998753
No 416
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=83.45 E-value=1 Score=45.39 Aligned_cols=34 Identities=24% Similarity=0.390 Sum_probs=31.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCC
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~ 146 (644)
...|.|||.|..|...|..|++. |++|+++++.+
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~------G~~V~~~dr~~ 42 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQ------GKRVAIWNRSP 42 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSH
T ss_pred CCeEEEECCCHHHHHHHHHHHHC------CCEEEEEeCCH
Confidence 45799999999999999999999 99999999875
No 417
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=83.17 E-value=1.1 Score=45.26 Aligned_cols=32 Identities=28% Similarity=0.393 Sum_probs=29.5
Q ss_pred cEEEECCCHHHHHHHHHHHhhchhcCCCC--eEEEEcCCC
Q 006466 109 DVVIVGAGPAGLSAAIRLKQLCREKNVDL--SVCVVEKGA 146 (644)
Q Consensus 109 DVvIVGgG~aGl~aA~~La~~~~~~~~G~--~V~viEk~~ 146 (644)
.|.|||+|..|.+.|..|++. |+ +|+++|...
T Consensus 2 kI~VIGaG~vG~~la~~la~~------g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLR------GSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHT------TCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC------CCCCEEEEEeCCH
Confidence 589999999999999999998 88 999999864
No 418
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=83.15 E-value=0.92 Score=46.18 Aligned_cols=34 Identities=29% Similarity=0.317 Sum_probs=31.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCC
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~ 147 (644)
..|.|||+|.-|...|..|++. |++|+++|+.++
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~------G~~V~l~d~~~~ 40 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASG------GFRVKLYDIEPR 40 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCEEEECSCHH
T ss_pred ceEEEEeeCHHHHHHHHHHHHC------CCEEEEEeCCHH
Confidence 4699999999999999999999 999999998764
No 419
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A*
Probab=83.07 E-value=0.34 Score=58.34 Aligned_cols=45 Identities=18% Similarity=0.273 Sum_probs=32.3
Q ss_pred eeeCCeeEEEecCCCCceeEEEecCCcccCCCCcceeeeCCCCCceee
Q 006466 584 RYCPARVYEYVPDEKNQLKLQINAQNCLHCKDFQACDIKDPKQNIKWT 631 (644)
Q Consensus 584 ~~cpa~~y~~~~~~~~~~~~~~~~~~c~~c~~~~~c~~~~p~~~i~w~ 631 (644)
-.||.+...+....-......+|.++|++|+ .|...||+..|...
T Consensus 662 G~~p~G~~~~~k~~i~~~~p~~d~~kCi~Cg---~Cv~vCP~~AI~~~ 706 (1231)
T 2c42_A 662 GRFPLGTSQFEKRGVAINVPQWVPENCIQCN---QCAFVCPHSAILPV 706 (1231)
T ss_dssp CCBCTTGGGGTCCCCCSEEEEECTTTCCCCC---HHHHHCSSCCEEEE
T ss_pred CcccCCcccccccCCCccceEEeCccCCchh---hHHHhCCccccccc
Confidence 4677776433222111225689999999999 99999999999874
No 420
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=82.99 E-value=1.2 Score=45.09 Aligned_cols=34 Identities=21% Similarity=0.303 Sum_probs=31.5
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCC
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~ 147 (644)
..|.|||.|..|...|..|++. |.+|+++++.+.
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~------G~~V~~~dr~~~ 55 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKN------GFKVTVWNRTLS 55 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSGG
T ss_pred CEEEEECccHHHHHHHHHHHHC------CCeEEEEeCCHH
Confidence 4799999999999999999999 999999999764
No 421
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=82.79 E-value=1.3 Score=43.87 Aligned_cols=35 Identities=29% Similarity=0.446 Sum_probs=31.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCC
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~ 147 (644)
...|+|+|+|-+|-++|..|++. |.+|+|+.|..+
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~------G~~v~V~nRt~~ 152 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQ------GLQVSVLNRSSR 152 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHC------CCEEEEEeCCHH
Confidence 45799999999999999999999 999999998764
No 422
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=82.69 E-value=1.2 Score=44.09 Aligned_cols=34 Identities=24% Similarity=0.450 Sum_probs=30.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCC
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~ 146 (644)
...|+|+|+|.+|.++|..|++. |.+|+|+.|..
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~------G~~V~v~~R~~ 152 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSL------DCAVTITNRTV 152 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHc------CCEEEEEECCH
Confidence 34699999999999999999999 99999998864
No 423
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=82.69 E-value=1.2 Score=47.45 Aligned_cols=34 Identities=18% Similarity=0.266 Sum_probs=31.5
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCC
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~ 147 (644)
..|.|||.|-.||.+|..|++. |++|+.+|..+.
T Consensus 22 ~~IaViGlGYVGLp~A~~~A~~------G~~V~g~Did~~ 55 (444)
T 3vtf_A 22 ASLSVLGLGYVGVVHAVGFALL------GHRVVGYDVNPS 55 (444)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCEEEEECSCHH
T ss_pred CEEEEEccCHHHHHHHHHHHhC------CCcEEEEECCHH
Confidence 5799999999999999999999 999999998764
No 424
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=82.68 E-value=0.99 Score=46.03 Aligned_cols=34 Identities=18% Similarity=0.166 Sum_probs=30.1
Q ss_pred ccEEEECCCHHHHH-HHHHHHhhchhcCCCCeEEEEcCCCC
Q 006466 108 YDVVIVGAGPAGLS-AAIRLKQLCREKNVDLSVCVVEKGAE 147 (644)
Q Consensus 108 ~DVvIVGgG~aGl~-aA~~La~~~~~~~~G~~V~viEk~~~ 147 (644)
..|.|||.|.+|++ +|..|+++ |.+|++.|+...
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~------G~~V~~~D~~~~ 39 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEA------GFEVSGCDAKMY 39 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHT------TCEEEEEESSCC
T ss_pred cEEEEEEECHHHHHHHHHHHHhC------CCEEEEEcCCCC
Confidence 36999999999996 78888898 999999998764
No 425
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=82.57 E-value=1.3 Score=47.60 Aligned_cols=55 Identities=16% Similarity=0.232 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHhc--------CCEEecCceEEEEEEcCCCcEEEEEeCcCccccCCCcccccccceEEEcCEEEEecCC
Q 006466 212 SQLVRWLGGKAEEL--------GVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGC 283 (644)
Q Consensus 212 ~~l~~~L~~~a~~~--------Gv~i~~g~~v~~v~~~~~g~v~gV~~~d~g~~~~G~~~~~~~~g~~i~a~~vV~A~G~ 283 (644)
..+.+.|.+.+.+. |++|+++++|++|..++++ + .|++.+ |.+++||.||.|.+.
T Consensus 206 ~~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~~~-v-~v~~~~---------------g~~~~ad~vI~a~~~ 268 (472)
T 1b37_A 206 EAVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSPGG-V-TVKTED---------------NSVYSADYVMVSASL 268 (472)
T ss_dssp THHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEECSSC-E-EEEETT---------------SCEEEESEEEECSCH
T ss_pred HHHHHHHHHhccccccccccccccEEEcCCEEEEEEEcCCc-E-EEEECC---------------CCEEEcCEEEEecCH
Confidence 35666676665543 6789999999999987754 4 377765 668999999999984
No 426
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=82.42 E-value=1.3 Score=44.88 Aligned_cols=35 Identities=20% Similarity=0.438 Sum_probs=29.7
Q ss_pred cEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCC
Q 006466 109 DVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (644)
Q Consensus 109 DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~ 147 (644)
.|.|||+|..|.+.|..|++. ..|.+|+++|+.+.
T Consensus 2 kI~VIGaG~vG~~la~~la~~----~~g~~V~l~D~~~~ 36 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEK----QLARELVLLDVVEG 36 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHT----TCCSEEEEECSSSS
T ss_pred EEEEECCCHHHHHHHHHHHhC----CCCCEEEEEeCChh
Confidence 589999999999999999984 11789999999753
No 427
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=82.36 E-value=1.6 Score=47.37 Aligned_cols=36 Identities=31% Similarity=0.487 Sum_probs=33.4
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCC
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~ 147 (644)
.++|+||||+|++|+.+|..|++. |.+|+|||++..
T Consensus 10 ~~~d~~iiG~G~~g~~~a~~l~~~------~~~v~~~e~~~~ 45 (507)
T 1coy_A 10 DRVPALVIGSGYGGAVAALRLTQA------GIPTQIVEMGRS 45 (507)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC------CCcEEEEECCCC
Confidence 469999999999999999999998 999999999863
No 428
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=82.21 E-value=1.3 Score=45.81 Aligned_cols=34 Identities=26% Similarity=0.441 Sum_probs=30.9
Q ss_pred cEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCC
Q 006466 109 DVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEV 148 (644)
Q Consensus 109 DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~ 148 (644)
.|+|+|||..|..+|+.+++. |++|+++|..+..
T Consensus 3 ~I~ilGgg~~g~~~~~~Ak~~------G~~vv~vd~~~~~ 36 (363)
T 4ffl_A 3 TICLVGGKLQGFEAAYLSKKA------GMKVVLVDKNPQA 36 (363)
T ss_dssp EEEEECCSHHHHHHHHHHHHT------TCEEEEEESCTTC
T ss_pred EEEEECCCHHHHHHHHHHHHC------CCEEEEEeCCCCC
Confidence 599999999999999999999 9999999987653
No 429
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=82.18 E-value=1.3 Score=47.25 Aligned_cols=36 Identities=22% Similarity=0.416 Sum_probs=32.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCC
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEV 148 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~ 148 (644)
...+.|||.|..|+..|..|++. |.+|+++++.++.
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~------G~~V~~~D~~~~k 43 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDF------GHEVVCVDKDARK 43 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCSTT
T ss_pred ceEEEEEcCCHHHHHHHHHHHHC------CCEEEEEeCCHHH
Confidence 36799999999999999999999 9999999998753
No 430
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=81.89 E-value=1.1 Score=48.11 Aligned_cols=34 Identities=32% Similarity=0.335 Sum_probs=31.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCC
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~ 146 (644)
...|+|+|+|..|.++|..|+.. |.+|+++|+.+
T Consensus 265 GKtVvVtGaGgIG~aiA~~Laa~------GA~Viv~D~~~ 298 (488)
T 3ond_A 265 GKVAVVAGYGDVGKGCAAALKQA------GARVIVTEIDP 298 (488)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHC------CCEEEEEcCCH
Confidence 45799999999999999999999 99999999864
No 431
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=81.83 E-value=1.1 Score=47.51 Aligned_cols=38 Identities=26% Similarity=0.360 Sum_probs=30.7
Q ss_pred cccccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCC
Q 006466 103 RESMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (644)
Q Consensus 103 ~~~~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~ 147 (644)
++.....|.|||+|..|+..|..|++ |.+|+++|+.++
T Consensus 32 r~~~~mkIaVIGlG~mG~~lA~~La~-------G~~V~~~D~~~~ 69 (432)
T 3pid_A 32 RGSEFMKITISGTGYVGLSNGVLIAQ-------NHEVVALDIVQA 69 (432)
T ss_dssp ---CCCEEEEECCSHHHHHHHHHHHT-------TSEEEEECSCHH
T ss_pred cccCCCEEEEECcCHHHHHHHHHHHc-------CCeEEEEecCHH
Confidence 34444579999999999999999885 899999998764
No 432
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=81.15 E-value=1.6 Score=44.41 Aligned_cols=34 Identities=18% Similarity=0.262 Sum_probs=30.8
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCC-eEEEEcCCCC
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGAE 147 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~-~V~viEk~~~ 147 (644)
..|.|||+|..|.+.|..|++. |+ +|+++|..+.
T Consensus 8 ~kI~viGaG~vG~~~a~~l~~~------~~~~v~L~Di~~~ 42 (324)
T 3gvi_A 8 NKIALIGSGMIGGTLAHLAGLK------ELGDVVLFDIAEG 42 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCeEEEEeCCch
Confidence 4799999999999999999998 88 9999998764
No 433
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=81.06 E-value=1.3 Score=45.80 Aligned_cols=34 Identities=24% Similarity=0.296 Sum_probs=31.3
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCC
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~ 147 (644)
..|.|||+|.-|.+.|..|++. |.+|+++++.++
T Consensus 30 mkI~VIGaG~mG~alA~~La~~------G~~V~l~~r~~~ 63 (356)
T 3k96_A 30 HPIAILGAGSWGTALALVLARK------GQKVRLWSYESD 63 (356)
T ss_dssp SCEEEECCSHHHHHHHHHHHTT------TCCEEEECSCHH
T ss_pred CeEEEECccHHHHHHHHHHHHC------CCeEEEEeCCHH
Confidence 5799999999999999999999 999999998753
No 434
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=80.73 E-value=2.2 Score=40.35 Aligned_cols=55 Identities=18% Similarity=0.184 Sum_probs=39.4
Q ss_pred ccEEEECC-CHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCC------cccccCccChHHHHHHhh
Q 006466 108 YDVVIVGA-GPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGA------HIISGNVFEPRALNELLP 168 (644)
Q Consensus 108 ~DVvIVGg-G~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~------~~~~g~~i~~~~l~~l~~ 168 (644)
..|+|.|| |..|..++..|.+. |.+|+++.|.+.... ....+...++..+.+++.
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~------g~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~ 66 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNR------GFEVTAVVRHPEKIKIENEHLKVKKADVSSLDEVCEVCK 66 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTT------TCEEEEECSCGGGCCCCCTTEEEECCCTTCHHHHHHHHT
T ss_pred CEEEEEcCCchHHHHHHHHHHHC------CCEEEEEEcCcccchhccCceEEEEecCCCHHHHHHHhc
Confidence 36999996 99999999999998 999999999864221 112344445555555543
No 435
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=80.62 E-value=1.7 Score=44.16 Aligned_cols=33 Identities=33% Similarity=0.475 Sum_probs=30.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCC-eEEEEcCCC
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGA 146 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~-~V~viEk~~ 146 (644)
..|.|||+|..|.+.|..|++. |+ .|+++|..+
T Consensus 9 ~kv~ViGaG~vG~~ia~~l~~~------g~~~v~l~D~~~ 42 (315)
T 3tl2_A 9 KKVSVIGAGFTGATTAFLLAQK------ELADVVLVDIPQ 42 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCEEEEECCGG
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCeEEEEeccc
Confidence 4799999999999999999998 99 999999873
No 436
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=80.55 E-value=0.64 Score=44.77 Aligned_cols=34 Identities=21% Similarity=0.258 Sum_probs=29.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCC
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~ 147 (644)
...|+|+|+|..|...|..|.+. |. |+++|+.+.
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~------g~-v~vid~~~~ 42 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGS------EV-FVLAEDENV 42 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTS------EE-EEEESCGGG
T ss_pred CCEEEEECCChHHHHHHHHHHhC------Ce-EEEEECCHH
Confidence 35699999999999999999988 99 999998764
No 437
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=80.53 E-value=1.5 Score=44.09 Aligned_cols=34 Identities=12% Similarity=0.232 Sum_probs=30.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCC-eEEEEcCCC
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGA 146 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~-~V~viEk~~ 146 (644)
...|+|+|+|.+|.++|..|++. |. +|+|+.|..
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~~------G~~~V~v~nR~~ 175 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLST------AAERIDMANRTV 175 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT------TCSEEEEECSSH
T ss_pred CCEEEEECcHHHHHHHHHHHHHC------CCCEEEEEeCCH
Confidence 35699999999999999999998 98 999998874
No 438
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=80.30 E-value=1.5 Score=43.53 Aligned_cols=33 Identities=24% Similarity=0.308 Sum_probs=30.8
Q ss_pred cEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCC
Q 006466 109 DVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (644)
Q Consensus 109 DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~ 147 (644)
.|.|||.|..|...|..|++. |.+|+++++.+.
T Consensus 3 ~i~iIG~G~mG~~~a~~l~~~------G~~V~~~dr~~~ 35 (287)
T 3pef_A 3 KFGFIGLGIMGSAMAKNLVKA------GCSVTIWNRSPE 35 (287)
T ss_dssp EEEEECCSHHHHHHHHHHHHT------TCEEEEECSSGG
T ss_pred EEEEEeecHHHHHHHHHHHHC------CCeEEEEcCCHH
Confidence 599999999999999999999 999999999864
No 439
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=80.25 E-value=1.4 Score=44.66 Aligned_cols=35 Identities=17% Similarity=0.142 Sum_probs=31.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCC-CeEEEEcCCCC
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVD-LSVCVVEKGAE 147 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G-~~V~viEk~~~ 147 (644)
...|.|||.|..|...|..|++. | .+|+++++.+.
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~------G~~~V~~~dr~~~ 59 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGR------NAARLAAYDLRFN 59 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT------TCSEEEEECGGGG
T ss_pred CCeEEEECccHHHHHHHHHHHHc------CCCeEEEEeCCCc
Confidence 45799999999999999999999 9 99999998763
No 440
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=80.22 E-value=1.9 Score=42.30 Aligned_cols=33 Identities=24% Similarity=0.307 Sum_probs=29.9
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCCe-EEEEcCCC
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLS-VCVVEKGA 146 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~-V~viEk~~ 146 (644)
..|.|||+|-.|...|..|++. |.+ |.++++.+
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~------g~~~v~~~~~~~ 44 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRK------GFRIVQVYSRTE 44 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH------TCCEEEEECSSH
T ss_pred CeEEEEcCCHHHHHHHHHHHHC------CCeEEEEEeCCH
Confidence 4799999999999999999998 998 89998864
No 441
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=80.04 E-value=1.5 Score=42.65 Aligned_cols=35 Identities=20% Similarity=0.375 Sum_probs=31.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCC
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~ 147 (644)
...|.|||+|-.|.+.|..|++. |.+|+++++.++
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~------G~~V~~~~r~~~ 53 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADL------GHEVTIGTRDPK 53 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHC------CCEEEEEeCChh
Confidence 46799999999999999999999 999999998753
No 442
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=80.03 E-value=1.5 Score=47.01 Aligned_cols=33 Identities=24% Similarity=0.206 Sum_probs=30.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCC
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKG 145 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~ 145 (644)
...|+|||||..|...|..|.+. |.+|+|+++.
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~------ga~V~vi~~~ 44 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEA------GARLTVNALT 44 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT------TBEEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------cCEEEEEcCC
Confidence 35699999999999999999999 9999999974
No 443
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=79.98 E-value=1.4 Score=46.38 Aligned_cols=35 Identities=29% Similarity=0.335 Sum_probs=31.6
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCC
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~ 146 (644)
....|+|||.|..|..+|..|+.. |.+|+++|+.+
T Consensus 219 ~GktV~ViG~G~IGk~vA~~Lra~------Ga~Viv~D~dp 253 (435)
T 3gvp_A 219 GGKQVVVCGYGEVGKGCCAALKAM------GSIVYVTEIDP 253 (435)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCH
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHC------CCEEEEEeCCh
Confidence 346799999999999999999998 99999999864
No 444
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=79.90 E-value=1.4 Score=47.17 Aligned_cols=34 Identities=24% Similarity=0.397 Sum_probs=31.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCC
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~ 147 (644)
..|.|||+|.-|...|..|++. |++|+++|+.++
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~a------G~~V~l~D~~~e 88 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLA------GIETFLVVRNEQ 88 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHC------CCeEEEEECcHH
Confidence 3699999999999999999999 999999999875
No 445
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=79.77 E-value=1.5 Score=43.96 Aligned_cols=34 Identities=24% Similarity=0.364 Sum_probs=30.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCC
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~ 147 (644)
...|.|||+|.-|...|..|+ . |++|+++|+.++
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-a------G~~V~v~d~~~~ 45 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-S------KHEVVLQDVSEK 45 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-T------TSEEEEECSCHH
T ss_pred CCeEEEEeeCHHHHHHHHHHH-c------CCEEEEEECCHH
Confidence 467999999999999999999 8 999999998763
No 446
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=79.61 E-value=1.4 Score=44.61 Aligned_cols=33 Identities=24% Similarity=0.301 Sum_probs=29.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCC
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~ 146 (644)
...|.|||+|--|.+.|..|++. |.+|+++ +++
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~------G~~V~l~-~~~ 51 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARA------GHEVILI-ARP 51 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHT------TCEEEEE-CCH
T ss_pred CCcEEEECcCHHHHHHHHHHHHC------CCeEEEE-EcH
Confidence 35799999999999999999998 9999999 654
No 447
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=79.54 E-value=2.5 Score=42.35 Aligned_cols=36 Identities=19% Similarity=0.231 Sum_probs=31.2
Q ss_pred ccccEEEECC-CHHHHHHHHHHHhhchhcCCCCeEEEEcCCCC
Q 006466 106 MAYDVVIVGA-GPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (644)
Q Consensus 106 ~~~DVvIVGg-G~aGl~aA~~La~~~~~~~~G~~V~viEk~~~ 147 (644)
|...|+|+|| |..|...+..|.+. |.+|+++.|.+.
T Consensus 10 m~~~ilVtGatG~iG~~l~~~L~~~------g~~V~~l~R~~~ 46 (318)
T 2r6j_A 10 MKSKILIFGGTGYIGNHMVKGSLKL------GHPTYVFTRPNS 46 (318)
T ss_dssp CCCCEEEETTTSTTHHHHHHHHHHT------TCCEEEEECTTC
T ss_pred CCCeEEEECCCchHHHHHHHHHHHC------CCcEEEEECCCC
Confidence 3346999997 99999999999998 999999998764
No 448
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=79.51 E-value=1.5 Score=46.99 Aligned_cols=33 Identities=30% Similarity=0.499 Sum_probs=30.5
Q ss_pred cEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCC
Q 006466 109 DVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (644)
Q Consensus 109 DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~ 147 (644)
.|.|||+|..|...|..|++. |++|+++|+.+.
T Consensus 39 kV~VIGaG~MG~~iA~~la~~------G~~V~l~D~~~~ 71 (463)
T 1zcj_A 39 SVGVLGLGTMGRGIAISFARV------GISVVAVESDPK 71 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHTT------TCEEEEECSSHH
T ss_pred EEEEECcCHHHHHHHHHHHhC------CCeEEEEECCHH
Confidence 599999999999999999999 999999998753
No 449
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=79.50 E-value=2 Score=43.61 Aligned_cols=34 Identities=24% Similarity=0.253 Sum_probs=30.5
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCC-eEEEEcCCCC
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGAE 147 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~-~V~viEk~~~ 147 (644)
..|.|||+|..|.+.|..|++. ++ +|+++|..+.
T Consensus 6 ~kI~iiGaG~vG~~~a~~l~~~------~~~~v~l~Di~~~ 40 (321)
T 3p7m_A 6 KKITLVGAGNIGGTLAHLALIK------QLGDVVLFDIAQG 40 (321)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCceEEEEeCChH
Confidence 4799999999999999999998 77 9999998763
No 450
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=79.43 E-value=1.1 Score=47.61 Aligned_cols=33 Identities=24% Similarity=0.208 Sum_probs=30.3
Q ss_pred cEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCC
Q 006466 109 DVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (644)
Q Consensus 109 DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~ 147 (644)
.|.|||+|..|+..|..|++. |.+|+++++.+.
T Consensus 2 kI~VIG~G~vG~~~A~~la~~------G~~V~~~d~~~~ 34 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSAR------GHEVIGVDVSST 34 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHT------TCEEEEECSCHH
T ss_pred EEEEECCCHHHHHHHHHHHHC------CCEEEEEECCHH
Confidence 589999999999999999999 999999998753
No 451
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=79.39 E-value=1.6 Score=43.07 Aligned_cols=33 Identities=9% Similarity=0.056 Sum_probs=30.5
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCC
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~ 146 (644)
..|+|.|+|..|..++..|.+. |.+|+++.|.+
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~------g~~V~~~~r~~ 38 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQ------GWRIIGTSRNP 38 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGG------TCEEEEEESCG
T ss_pred CcEEEECCcHHHHHHHHHHHHC------CCEEEEEEcCh
Confidence 4699999999999999999998 99999999875
No 452
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=79.33 E-value=1.2 Score=42.51 Aligned_cols=34 Identities=24% Similarity=0.419 Sum_probs=30.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEE-EcCCCC
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCV-VEKGAE 147 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~v-iEk~~~ 147 (644)
..|.|||+|-.|.+.|..|++. |.+|++ +++.++
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~------g~~V~~v~~r~~~ 58 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAA------QIPAIIANSRGPA 58 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHT------TCCEEEECTTCGG
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCEEEEEECCCHH
Confidence 4799999999999999999998 999999 888754
No 453
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=79.29 E-value=1.2 Score=45.93 Aligned_cols=32 Identities=28% Similarity=0.428 Sum_probs=30.0
Q ss_pred cEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCC
Q 006466 109 DVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (644)
Q Consensus 109 DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~ 146 (644)
.|.|||+|..|.+.|..|++. |.+|+++++.+
T Consensus 17 kI~iIG~G~mG~~la~~L~~~------G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKK------CREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTT------EEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhC------CCEEEEEECCH
Confidence 799999999999999999998 99999999864
No 454
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=79.21 E-value=1.8 Score=43.89 Aligned_cols=32 Identities=25% Similarity=0.390 Sum_probs=29.4
Q ss_pred cEEEECCCHHHHHHHHHHHhhchhcCCCC--eEEEEcCCC
Q 006466 109 DVVIVGAGPAGLSAAIRLKQLCREKNVDL--SVCVVEKGA 146 (644)
Q Consensus 109 DVvIVGgG~aGl~aA~~La~~~~~~~~G~--~V~viEk~~ 146 (644)
.|.|||+|-.|.+.|..|++. |. +|+++|+.+
T Consensus 2 kI~VIGaG~~G~~la~~l~~~------g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMK------GFAREMVLIDVDK 35 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHH------TCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC------CCCCeEEEEeCCh
Confidence 589999999999999999998 88 999999864
No 455
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=79.18 E-value=1.6 Score=43.76 Aligned_cols=32 Identities=22% Similarity=0.235 Sum_probs=29.4
Q ss_pred cEEEECCCHHHHHHHHHHHhhchhcCCCC--eEEEEcCCC
Q 006466 109 DVVIVGAGPAGLSAAIRLKQLCREKNVDL--SVCVVEKGA 146 (644)
Q Consensus 109 DVvIVGgG~aGl~aA~~La~~~~~~~~G~--~V~viEk~~ 146 (644)
.|.|||+|..|.+.|..|++. |. +|+++|+.+
T Consensus 2 kI~ViGaG~vG~~la~~l~~~------~~~~~v~L~D~~~ 35 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLN------LDVDEIALVDIAE 35 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHH------SCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC------CCCCeEEEEECCh
Confidence 589999999999999999998 87 899999865
No 456
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=79.16 E-value=1.6 Score=45.17 Aligned_cols=35 Identities=17% Similarity=0.303 Sum_probs=32.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCC
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~ 147 (644)
...|.|||.|..|...|..|++. |.+|+++++.+.
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~------G~~V~v~dr~~~ 56 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKG------GHECVVYDLNVN 56 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCHH
T ss_pred CCEEEEECchHHHHHHHHHHHhC------CCEEEEEeCCHH
Confidence 45799999999999999999999 999999998753
No 457
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=79.09 E-value=1.7 Score=44.03 Aligned_cols=30 Identities=27% Similarity=0.288 Sum_probs=28.5
Q ss_pred cEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcC
Q 006466 109 DVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEK 144 (644)
Q Consensus 109 DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk 144 (644)
.|.|||+|..|.+.|..|++. |.+|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~------g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDN------GNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHH------CCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhC------CCeEEEEEc
Confidence 489999999999999999999 999999998
No 458
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=78.97 E-value=1.5 Score=43.54 Aligned_cols=35 Identities=23% Similarity=0.279 Sum_probs=31.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCC-eEEEEcCCCC
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGAE 147 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~-~V~viEk~~~ 147 (644)
...|+|+|+|-+|.++|..|++. |. +|+|+.|...
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~~~------G~~~v~v~~R~~~ 152 (277)
T 3don_A 117 DAYILILGAGGASKGIANELYKI------VRPTLTVANRTMS 152 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHHTT------CCSCCEEECSCGG
T ss_pred CCEEEEECCcHHHHHHHHHHHHC------CCCEEEEEeCCHH
Confidence 45799999999999999999999 98 8999998764
No 459
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=78.93 E-value=2 Score=47.14 Aligned_cols=36 Identities=44% Similarity=0.738 Sum_probs=33.7
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCC
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~ 147 (644)
..|||||||+|++|+++|.+|++. |++|+|||++..
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~------g~~VlvlE~g~~ 41 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEA------GKKVLLLERGGP 41 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSCC
T ss_pred CceeEEEECcCHHHHHHHHHHHhC------CCeEEEEeCCCC
Confidence 469999999999999999999998 999999999864
No 460
>2v2k_A Ferredoxin; iron, transport, iron-sulfur, mycobacterium tuberculosis, Fe cluster, metal-binding, electron transfer, transport; 1.6A {Mycobacterium smegmatis}
Probab=78.92 E-value=0.54 Score=39.10 Aligned_cols=25 Identities=28% Similarity=0.343 Sum_probs=22.2
Q ss_pred EEecCCcccC--CCCcceeeeCCCCCceee
Q 006466 604 QINAQNCLHC--KDFQACDIKDPKQNIKWT 631 (644)
Q Consensus 604 ~~~~~~c~~c--~~~~~c~~~~p~~~i~w~ 631 (644)
.|+.+.|++| | .|...||.++|.+.
T Consensus 2 ~i~~~~C~~C~c~---~C~~~CP~~ai~~~ 28 (105)
T 2v2k_A 2 YVIAEPCVDVKDK---ACIEECPVDCIYEG 28 (105)
T ss_dssp EEECGGGTTTCCC---HHHHHCTTCCEEEC
T ss_pred EEecccCCCCCcC---hhhhhcCccccCcC
Confidence 4788899988 9 99999999999874
No 461
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=78.75 E-value=2 Score=40.77 Aligned_cols=33 Identities=30% Similarity=0.293 Sum_probs=30.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCC
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~ 146 (644)
..|.|||+|-.|...|..|++. |.+|+++++.+
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~------g~~V~~~~r~~ 61 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGS------GFKVVVGSRNP 61 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT------TCCEEEEESSH
T ss_pred CEEEEEccCHHHHHHHHHHHHC------CCEEEEEeCCH
Confidence 4699999999999999999998 99999999864
No 462
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=78.70 E-value=2.2 Score=43.48 Aligned_cols=33 Identities=27% Similarity=0.416 Sum_probs=29.7
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCC--eEEEEcCCC
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDL--SVCVVEKGA 146 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~--~V~viEk~~ 146 (644)
..|.|||+|..|.++|..|++. |+ +|+++|...
T Consensus 6 ~kI~ViGaG~vG~~~a~~l~~~------~~~~~l~l~D~~~ 40 (326)
T 3pqe_A 6 NKVALIGAGFVGSSYAFALINQ------GITDELVVIDVNK 40 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCCSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCceEEEEecch
Confidence 4699999999999999999998 87 899999854
No 463
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=78.55 E-value=2.1 Score=43.14 Aligned_cols=34 Identities=24% Similarity=0.304 Sum_probs=31.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCC
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~ 147 (644)
..|.|||+|..|...|..|++. |.+|+++++.+.
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~------g~~V~~~~~~~~ 64 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKM------GHTVTVWNRTAE 64 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT------TCCEEEECSSGG
T ss_pred CeEEEEcccHHHHHHHHHHHhC------CCEEEEEeCCHH
Confidence 4799999999999999999998 999999998754
No 464
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=78.47 E-value=1.6 Score=47.05 Aligned_cols=34 Identities=29% Similarity=0.334 Sum_probs=31.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCC
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~ 146 (644)
...|+|||+|..|..+|..|+.. |.+|+++|+.+
T Consensus 274 GktV~IiG~G~IG~~~A~~lka~------Ga~Viv~d~~~ 307 (494)
T 3ce6_A 274 GKKVLICGYGDVGKGCAEAMKGQ------GARVSVTEIDP 307 (494)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCH
T ss_pred cCEEEEEccCHHHHHHHHHHHHC------CCEEEEEeCCH
Confidence 45799999999999999999998 99999999875
No 465
>1bc6_A 7-Fe ferredoxin; electron transport, iron-sulfur; NMR {Bacillus schlegelii} SCOP: d.58.1.2 PDB: 1bd6_A 1bqx_A 1bwe_A
Probab=78.44 E-value=0.76 Score=35.69 Aligned_cols=25 Identities=16% Similarity=0.210 Sum_probs=22.2
Q ss_pred EEecCCccc--CCCCcceeeeCCCCCceee
Q 006466 604 QINAQNCLH--CKDFQACDIKDPKQNIKWT 631 (644)
Q Consensus 604 ~~~~~~c~~--c~~~~~c~~~~p~~~i~w~ 631 (644)
.|+.++|++ || .|...||.++|.+.
T Consensus 2 ~i~~~~C~~c~C~---~C~~~Cp~~ai~~~ 28 (77)
T 1bc6_A 2 YVITEPCIGTKDA---SCVEVCPVDCIHEG 28 (77)
T ss_dssp EECCSTTTTCCCC---SSTTTCTTCCEEEC
T ss_pred EEeCccCCCCCcc---hhHHhcccccEEeC
Confidence 367889999 99 99999999999875
No 466
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=78.17 E-value=2.3 Score=43.14 Aligned_cols=33 Identities=27% Similarity=0.448 Sum_probs=29.8
Q ss_pred cEEEECCCHHHHHHHHHHHhhchhcCCCC--eEEEEcCCCC
Q 006466 109 DVVIVGAGPAGLSAAIRLKQLCREKNVDL--SVCVVEKGAE 147 (644)
Q Consensus 109 DVvIVGgG~aGl~aA~~La~~~~~~~~G~--~V~viEk~~~ 147 (644)
.|.|||+|..|.+.|..|++. ++ .++++|..+.
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~------~~~~el~l~D~~~~ 36 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQ------DVAKEVVMVDIKDG 36 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHH------TCSSEEEEECSSTT
T ss_pred EEEEECCCHHHHHHHHHHHhC------CCCCEEEEEeCchH
Confidence 589999999999999999998 77 8999998763
No 467
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=78.16 E-value=2 Score=43.01 Aligned_cols=34 Identities=26% Similarity=0.419 Sum_probs=31.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCC
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~ 146 (644)
...|.|||+|..|..+|..|+.. |.+|+++++..
T Consensus 155 g~~v~IiG~G~iG~~~a~~l~~~------G~~V~~~dr~~ 188 (293)
T 3d4o_A 155 GANVAVLGLGRVGMSVARKFAAL------GAKVKVGARES 188 (293)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC------CCEEEEEECCH
Confidence 45799999999999999999998 99999999874
No 468
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=78.10 E-value=16 Score=42.31 Aligned_cols=38 Identities=18% Similarity=-0.025 Sum_probs=30.6
Q ss_pred CCeEEEccCCcccCCCCCcchHHHHHHHHHHHHHHhccccC
Q 006466 415 PGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE 455 (644)
Q Consensus 415 ~~v~LiGDAA~~~~P~~g~G~~~A~~sa~~lA~~l~~~l~~ 455 (644)
+|++++|++.+... ..-++-|+.+|..+|+.|.+.+..
T Consensus 794 grL~FAGE~Ts~~~---~gtveGAi~SG~RAA~~Il~~l~~ 831 (852)
T 2xag_A 794 PRLFFAGEHTIRNY---PATVHGALLSGLREAGRIADQFLG 831 (852)
T ss_dssp CCEEECSGGGCTTS---TTSHHHHHHHHHHHHHHHHHHHHC
T ss_pred CcEEEEehhHhCCC---CcCHHHHHHHHHHHHHHHHHHhhC
Confidence 69999999977432 346899999999999999886644
No 469
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=78.03 E-value=2 Score=43.13 Aligned_cols=34 Identities=24% Similarity=0.389 Sum_probs=31.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCC
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~ 146 (644)
...|.|||+|..|..+|..|+.. |.+|+++++..
T Consensus 157 g~~v~IiG~G~iG~~~a~~l~~~------G~~V~~~d~~~ 190 (300)
T 2rir_A 157 GSQVAVLGLGRTGMTIARTFAAL------GANVKVGARSS 190 (300)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSH
T ss_pred CCEEEEEcccHHHHHHHHHHHHC------CCEEEEEECCH
Confidence 45799999999999999999998 99999999864
No 470
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=78.00 E-value=1.6 Score=43.50 Aligned_cols=33 Identities=21% Similarity=0.320 Sum_probs=30.3
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCC
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~ 146 (644)
..|.|||+|..|...|..|++. |.+|.++++.+
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~------g~~V~~~~~~~ 38 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKA------GYSLVVSDRNP 38 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT------TCEEEEECSCH
T ss_pred ceEEEECchHHHHHHHHHHHhC------CCEEEEEeCCH
Confidence 4699999999999999999998 99999999865
No 471
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=77.97 E-value=2 Score=43.52 Aligned_cols=33 Identities=27% Similarity=0.324 Sum_probs=30.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCC--eEEEEcCCC
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDL--SVCVVEKGA 146 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~--~V~viEk~~ 146 (644)
..|.|||.|..|.+.|..|++. |. +|+++++.+
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~------G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRS------GFKGKIYGYDINP 68 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHT------TCCSEEEEECSCH
T ss_pred CEEEEEeeCHHHHHHHHHHHhC------CCCCEEEEEECCH
Confidence 5799999999999999999999 98 999999875
No 472
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=77.82 E-value=2.2 Score=42.28 Aligned_cols=34 Identities=18% Similarity=0.255 Sum_probs=30.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCC
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~ 146 (644)
...|+|||+|.+|.+.|..|++. |.+|++++|..
T Consensus 129 ~~~v~iiGaG~~g~aia~~L~~~------g~~V~v~~r~~ 162 (275)
T 2hk9_A 129 EKSILVLGAGGASRAVIYALVKE------GAKVFLWNRTK 162 (275)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHH------TCEEEEECSSH
T ss_pred CCEEEEECchHHHHHHHHHHHHc------CCEEEEEECCH
Confidence 35799999999999999999999 89999999874
No 473
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=77.64 E-value=1.6 Score=43.33 Aligned_cols=33 Identities=21% Similarity=0.245 Sum_probs=30.8
Q ss_pred cEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCC
Q 006466 109 DVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (644)
Q Consensus 109 DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~ 147 (644)
.|.|||.|..|...|..|++. |.+|+++++.+.
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~------G~~V~~~dr~~~ 35 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRA------GFDVTVWNRNPA 35 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHH------TCCEEEECSSGG
T ss_pred eEEEEccCHHHHHHHHHHHHC------CCeEEEEcCCHH
Confidence 599999999999999999999 999999999864
No 474
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=77.59 E-value=2.2 Score=43.64 Aligned_cols=35 Identities=20% Similarity=0.207 Sum_probs=29.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCC
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~ 147 (644)
.-.|+|+|+|+.|+.++..++.. |.+|+++++.++
T Consensus 177 g~~VlV~GaG~vG~~a~qla~~~------Ga~Vi~~~~~~~ 211 (348)
T 3two_A 177 GTKVGVAGFGGLGSMAVKYAVAM------GAEVSVFARNEH 211 (348)
T ss_dssp TCEEEEESCSHHHHHHHHHHHHT------TCEEEEECSSST
T ss_pred CCEEEEECCcHHHHHHHHHHHHC------CCeEEEEeCCHH
Confidence 34699999999999888777777 999999997763
No 475
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=77.55 E-value=2.2 Score=46.25 Aligned_cols=36 Identities=17% Similarity=0.357 Sum_probs=32.9
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCC
Q 006466 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (644)
Q Consensus 106 ~~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~ 147 (644)
|...|.|||.|.-|...|..|++. |++|+++++.+.
T Consensus 9 ~~~~IgvIGlG~MG~~lA~~La~~------G~~V~v~dr~~~ 44 (497)
T 2p4q_A 9 MSADFGLIGLAVMGQNLILNAADH------GFTVCAYNRTQS 44 (497)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSH
T ss_pred CCCCEEEEeeHHHHHHHHHHHHHC------CCEEEEEeCCHH
Confidence 457899999999999999999999 999999998763
No 476
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=77.51 E-value=4.4 Score=37.24 Aligned_cols=34 Identities=26% Similarity=0.424 Sum_probs=30.5
Q ss_pred ccEEEECC-CHHHHHHHHHHHhhchhcCCCCeEEEEcCCCC
Q 006466 108 YDVVIVGA-GPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (644)
Q Consensus 108 ~DVvIVGg-G~aGl~aA~~La~~~~~~~~G~~V~viEk~~~ 147 (644)
..|+|+|| |..|..++..|.+. |.+|+++.|.+.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~------g~~V~~~~r~~~ 38 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQA------GYEVTVLVRDSS 38 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT------TCEEEEEESCGG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHC------CCeEEEEEeChh
Confidence 35999999 99999999999998 999999998753
No 477
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=77.49 E-value=2.3 Score=44.11 Aligned_cols=35 Identities=23% Similarity=0.339 Sum_probs=29.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCC-eEEEEcCCCC
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGAE 147 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~-~V~viEk~~~ 147 (644)
.-.|+|+|+|+.|+.++..++.. |. +|+++++.+.
T Consensus 194 g~~VlV~GaG~vG~~a~q~a~~~------Ga~~Vi~~~~~~~ 229 (378)
T 3uko_A 194 GSNVAIFGLGTVGLAVAEGAKTA------GASRIIGIDIDSK 229 (378)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHH------TCSCEEEECSCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHc------CCCeEEEEcCCHH
Confidence 34799999999999888877777 98 8999997753
No 478
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=77.43 E-value=2 Score=44.60 Aligned_cols=34 Identities=12% Similarity=0.050 Sum_probs=31.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCC-------CeEEEEcCCCC
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVD-------LSVCVVEKGAE 147 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G-------~~V~viEk~~~ 147 (644)
..|.|||+|..|.+.|..|++. | .+|+++++.+.
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~------G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTN------AKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHH------HHHCTTBCSCEEEECCSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHc------CCccCCCCCeEEEEECChh
Confidence 3699999999999999999998 8 89999998765
No 479
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=77.39 E-value=1.6 Score=43.25 Aligned_cols=34 Identities=24% Similarity=0.321 Sum_probs=30.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCC
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~ 146 (644)
...|+|+|+|-+|.++|..|++. |.+|+|+.|..
T Consensus 119 ~~~vlvlGaGg~g~a~a~~L~~~------G~~v~v~~R~~ 152 (272)
T 1p77_A 119 NQHVLILGAGGATKGVLLPLLQA------QQNIVLANRTF 152 (272)
T ss_dssp TCEEEEECCSHHHHTTHHHHHHT------TCEEEEEESSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHC------CCEEEEEECCH
Confidence 35699999999999999999999 99999999874
No 480
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=77.28 E-value=2.2 Score=40.07 Aligned_cols=32 Identities=28% Similarity=0.461 Sum_probs=29.3
Q ss_pred cEEEEC-CCHHHHHHHHHHHhhchhcCCCCeEEEEcCCC
Q 006466 109 DVVIVG-AGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (644)
Q Consensus 109 DVvIVG-gG~aGl~aA~~La~~~~~~~~G~~V~viEk~~ 146 (644)
.|+||| +|-.|...|..|++. |.+|+++++.+
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~------g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATL------GHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTT------TCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHC------CCEEEEEeCCH
Confidence 489999 999999999999998 99999999864
No 481
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=77.21 E-value=1.5 Score=45.97 Aligned_cols=31 Identities=16% Similarity=0.146 Sum_probs=28.0
Q ss_pred ccEEEECCCHHHHHHHHHHHh-hchhcCCCCeEEEEcC
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQ-LCREKNVDLSVCVVEK 144 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~-~~~~~~~G~~V~viEk 144 (644)
..|.|||+|..|.+.|..|++ . |.+|+++++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~------G~~V~~~~~ 34 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRD------GVEVRVLTL 34 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTST------TEEEEEECC
T ss_pred ceEEEECCCHHHHHHHHHHHhCC------CCEEEEEeC
Confidence 369999999999999999987 6 999999983
No 482
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=77.05 E-value=2.1 Score=43.84 Aligned_cols=33 Identities=27% Similarity=0.226 Sum_probs=30.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCC
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~ 146 (644)
..|.|||.|..|.+.|..|++. |.+|+++++.+
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~------G~~V~~~dr~~ 41 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAA------NHSVFGYNRSR 41 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT------TCCEEEECSCH
T ss_pred CEEEEEeecHHHHHHHHHHHHC------CCEEEEEeCCH
Confidence 4699999999999999999999 99999999875
No 483
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=77.02 E-value=2.6 Score=42.76 Aligned_cols=34 Identities=24% Similarity=0.467 Sum_probs=29.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCC--eEEEEcCCC
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDL--SVCVVEKGA 146 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~--~V~viEk~~ 146 (644)
...|+|||+|..|.++|..|+.. ++ .++++|...
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~------~~~~ei~L~Di~~ 41 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQ------SIVDELVIIDLDT 41 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH------CSCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCCCEEEEEeCCh
Confidence 35899999999999999999988 74 899999753
No 484
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=76.89 E-value=2.6 Score=41.55 Aligned_cols=34 Identities=29% Similarity=0.427 Sum_probs=30.9
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCC
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~ 147 (644)
..|+|.|+|..|..++..|.+. |.+|+++.|...
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~------g~~V~~~~r~~~ 37 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQ------GHEVTGLRRSAQ 37 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT------TCCEEEEECTTS
T ss_pred CcEEEECCCHHHHHHHHHHHHC------CCEEEEEeCCcc
Confidence 3699999999999999999998 999999998754
No 485
>1h98_A Ferredoxin; electron transport, thermophilic, iron-sulfur, azotobacter, hydrogen bonds, stability, high resolution; 1.64A {Thermus aquaticus} SCOP: d.58.1.2
Probab=76.85 E-value=0.69 Score=36.08 Aligned_cols=25 Identities=16% Similarity=0.235 Sum_probs=22.4
Q ss_pred EEecCCccc--CCCCcceeeeCCCCCceee
Q 006466 604 QINAQNCLH--CKDFQACDIKDPKQNIKWT 631 (644)
Q Consensus 604 ~~~~~~c~~--c~~~~~c~~~~p~~~i~w~ 631 (644)
.|+.+.|++ || .|.-.||.++|.+.
T Consensus 2 ~i~~~~C~~c~C~---~C~~~CP~~ai~~~ 28 (78)
T 1h98_A 2 HVICEPCIGVKDQ---SCVEVCPVECIYDG 28 (78)
T ss_dssp EEECGGGTTTCCC---HHHHHCTTCCEEEC
T ss_pred EEEchhCCCCCcC---hhhhhcCccceEcC
Confidence 468889999 99 99999999999875
No 486
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=76.84 E-value=1.8 Score=44.37 Aligned_cols=34 Identities=24% Similarity=0.141 Sum_probs=31.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCC-------CeEEEEcCCCC
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVD-------LSVCVVEKGAE 147 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G-------~~V~viEk~~~ 147 (644)
..|.|||+|..|.+.|..|++. | .+|+++++.+.
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~------g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGN------AAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH------HHHCTTEEEEEEEECCCCB
T ss_pred CeEEEECCCHHHHHHHHHHHhc------CCcccCCCCeEEEEEcChh
Confidence 4699999999999999999998 8 89999998765
No 487
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=76.78 E-value=2.4 Score=43.65 Aligned_cols=34 Identities=24% Similarity=0.332 Sum_probs=29.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCC
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~ 147 (644)
-.|+|+|+|+.|+.++..++.. |.+|+++++.+.
T Consensus 181 ~~VlV~GaG~vG~~~~qlak~~------Ga~Vi~~~~~~~ 214 (360)
T 1piw_A 181 KKVGIVGLGGIGSMGTLISKAM------GAETYVISRSSR 214 (360)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCEEEEEESSST
T ss_pred CEEEEECCCHHHHHHHHHHHHC------CCEEEEEcCCHH
Confidence 4699999999999988887777 999999997653
No 488
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=76.78 E-value=2.4 Score=42.49 Aligned_cols=34 Identities=24% Similarity=0.300 Sum_probs=30.8
Q ss_pred ccEEEEC-CCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCC
Q 006466 108 YDVVIVG-AGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (644)
Q Consensus 108 ~DVvIVG-gG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~ 147 (644)
..|.||| +|-.|.+.|..|++. |.+|+++++.+.
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~------G~~V~~~~~~~~ 56 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRAS------GYPISILDREDW 56 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTT------TCCEEEECTTCG
T ss_pred CEEEEEcCCCHHHHHHHHHHHhC------CCeEEEEECCcc
Confidence 4699999 999999999999998 999999998653
No 489
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=76.76 E-value=2.4 Score=41.47 Aligned_cols=32 Identities=34% Similarity=0.488 Sum_probs=29.9
Q ss_pred cEEEECCCHHHHHHHHHHHhhchhcCCCC-eEEEEcCCC
Q 006466 109 DVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGA 146 (644)
Q Consensus 109 DVvIVGgG~aGl~aA~~La~~~~~~~~G~-~V~viEk~~ 146 (644)
.|+|||+|-+|-+++..|.+. |. +|+|+.|..
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~------G~~~I~v~nR~~ 142 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQM------GVKDIWVVNRTI 142 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHT------TCCCEEEEESCH
T ss_pred eEEEECcHHHHHHHHHHHHHc------CCCEEEEEeCCH
Confidence 799999999999999999998 98 899999875
No 490
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=76.66 E-value=2.7 Score=40.91 Aligned_cols=34 Identities=12% Similarity=0.163 Sum_probs=30.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCC----CeEEEEcCCCC
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVD----LSVCVVEKGAE 147 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G----~~V~viEk~~~ 147 (644)
..|.|||+|-.|.+.|..|++. | .+|+++++.+.
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~------g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANA------NIIKKENLFYYGPSKK 42 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHH------TSSCGGGEEEECSSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHC------CCCCCCeEEEEeCCcc
Confidence 3699999999999999999998 8 69999998765
No 491
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=76.64 E-value=2.3 Score=43.07 Aligned_cols=34 Identities=18% Similarity=0.295 Sum_probs=30.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCC-eEEEEcCCC
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGA 146 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~-~V~viEk~~ 146 (644)
...|+|+|+|-+|.++|..|++. |. +|+|+.|.+
T Consensus 154 gk~~lVlGaGG~g~aia~~L~~~------Ga~~V~i~nR~~ 188 (315)
T 3tnl_A 154 GKKMTICGAGGAATAICIQAALD------GVKEISIFNRKD 188 (315)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHT------TCSEEEEEECSS
T ss_pred CCEEEEECCChHHHHHHHHHHHC------CCCEEEEEECCC
Confidence 45799999999999999999999 98 899998874
No 492
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=76.60 E-value=2.5 Score=42.16 Aligned_cols=34 Identities=29% Similarity=0.309 Sum_probs=30.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCC-eEEEEcCCC
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGA 146 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~-~V~viEk~~ 146 (644)
...|+|+|+|-+|.++|..|++. |. +|+|+.|..
T Consensus 127 ~k~vlVlGaGG~g~aia~~L~~~------G~~~v~i~~R~~ 161 (283)
T 3jyo_A 127 LDSVVQVGAGGVGNAVAYALVTH------GVQKLQVADLDT 161 (283)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCSEEEEECSSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHC------CCCEEEEEECCH
Confidence 45799999999999999999999 98 699998864
No 493
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=76.37 E-value=2.3 Score=41.15 Aligned_cols=33 Identities=9% Similarity=0.258 Sum_probs=30.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCC----eEEEEcCCC
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDL----SVCVVEKGA 146 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~----~V~viEk~~ 146 (644)
..|.|||+|-.|.+.|..|.+. |+ +|.++++.+
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~------g~~~~~~V~~~~r~~ 39 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINK------NIVSSNQIICSDLNT 39 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT------TSSCGGGEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHhC------CCCCCCeEEEEeCCH
Confidence 4699999999999999999998 88 999999875
No 494
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=76.21 E-value=2.8 Score=41.93 Aligned_cols=34 Identities=24% Similarity=0.391 Sum_probs=30.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCC-eEEEEcCCC
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGA 146 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~-~V~viEk~~ 146 (644)
...|+|||+|-.|..+|..|++. |+ +++|+|...
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~a------GVG~i~lvD~D~ 70 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRC------GIGKLLLFDYDK 70 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHH------TCSEEEEECCCB
T ss_pred CCeEEEECcCHHHHHHHHHHHHc------CCCEEEEECCCc
Confidence 46899999999999999999999 87 788898764
No 495
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=76.15 E-value=2.3 Score=46.85 Aligned_cols=51 Identities=18% Similarity=0.279 Sum_probs=39.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCCCCCC---cccccCccChHHHH
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGA---HIISGNVFEPRALN 164 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~~~g~---~~~~g~~i~~~~l~ 164 (644)
..|+|||+|..|...|..|.+. |.+|+++|+.++.-. ....|...+...|.
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~------g~~v~vid~d~~~~~~~~~~i~gD~t~~~~L~ 402 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRK------PVPFILIDRQESPVCNDHVVVYGDATVGQTLR 402 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT------TCCEEEEESSCCSSCCSSCEEESCSSSSTHHH
T ss_pred CCEEEECCCHHHHHHHHHHHHC------CCCEEEEECChHHHhhcCCEEEeCCCCHHHHH
Confidence 5799999999999999999999 999999999876321 23345555544443
No 496
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=76.10 E-value=2.9 Score=42.44 Aligned_cols=34 Identities=29% Similarity=0.414 Sum_probs=29.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCC--eEEEEcCCC
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDL--SVCVVEKGA 146 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~--~V~viEk~~ 146 (644)
...|.|||+|..|.++|+.|+.. ++ .++++|...
T Consensus 5 ~~KI~IiGaG~vG~~~a~~l~~~------~~~~el~L~Di~~ 40 (318)
T 1ez4_A 5 HQKVVLVGDGAVGSSYAFAMAQQ------GIAEEFVIVDVVK 40 (318)
T ss_dssp BCEEEEECCSHHHHHHHHHHHHH------TCCSEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHcC------CCCCEEEEEeCCc
Confidence 46799999999999999999998 65 899999753
No 497
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=75.89 E-value=2.4 Score=44.51 Aligned_cols=34 Identities=29% Similarity=0.389 Sum_probs=30.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhhchhcCCCC-eEEEEcCCC
Q 006466 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGA 146 (644)
Q Consensus 107 ~~DVvIVGgG~aGl~aA~~La~~~~~~~~G~-~V~viEk~~ 146 (644)
...|+|||+|..|..+|..|+.. |. +|+++++..
T Consensus 167 g~~VlIiGaG~iG~~~a~~l~~~------G~~~V~v~~r~~ 201 (404)
T 1gpj_A 167 DKTVLVVGAGEMGKTVAKSLVDR------GVRAVLVANRTY 201 (404)
T ss_dssp TCEEEEESCCHHHHHHHHHHHHH------CCSEEEEECSSH
T ss_pred CCEEEEEChHHHHHHHHHHHHHC------CCCEEEEEeCCH
Confidence 45799999999999999999998 98 899999864
No 498
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=75.86 E-value=2.8 Score=39.23 Aligned_cols=32 Identities=28% Similarity=0.346 Sum_probs=29.4
Q ss_pred cEEEECC-CHHHHHHHHHHHhhchhcCCCCeEEEEcCCC
Q 006466 109 DVVIVGA-GPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (644)
Q Consensus 109 DVvIVGg-G~aGl~aA~~La~~~~~~~~G~~V~viEk~~ 146 (644)
.|+|.|| |..|..++..|.+. |.+|+++.|.+
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~------g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNR------GHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT------TCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHhC------CCEEEEEEcCc
Confidence 4899996 99999999999999 99999999875
No 499
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=75.76 E-value=2.7 Score=41.42 Aligned_cols=32 Identities=25% Similarity=0.257 Sum_probs=29.4
Q ss_pred cEEEECCCHHHHHHHHHHHhhchhcCCCCeEEEEcCCC
Q 006466 109 DVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (644)
Q Consensus 109 DVvIVGgG~aGl~aA~~La~~~~~~~~G~~V~viEk~~ 146 (644)
.|.|||+|..|.+.|..|++. |.+|+++++.+
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~------g~~V~~~~~~~ 33 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRR------GHYLIGVSRQQ 33 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHT------TCEEEEECSCH
T ss_pred EEEEEcCcHHHHHHHHHHHHC------CCEEEEEECCH
Confidence 489999999999999999998 99999998864
No 500
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=75.76 E-value=2.6 Score=42.68 Aligned_cols=34 Identities=15% Similarity=0.221 Sum_probs=30.5
Q ss_pred ccEEEECCCHHHHHHHHHHHhhchhcCCC----CeEEEEcCCCC
Q 006466 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVD----LSVCVVEKGAE 147 (644)
Q Consensus 108 ~DVvIVGgG~aGl~aA~~La~~~~~~~~G----~~V~viEk~~~ 147 (644)
..|.|||+|-.|.+.|..|++. | .+|+++++.+.
T Consensus 23 mkI~iIG~G~mG~ala~~L~~~------G~~~~~~V~v~~r~~~ 60 (322)
T 2izz_A 23 MSVGFIGAGQLAFALAKGFTAA------GVLAAHKIMASSPDMD 60 (322)
T ss_dssp CCEEEESCSHHHHHHHHHHHHT------TSSCGGGEEEECSCTT
T ss_pred CEEEEECCCHHHHHHHHHHHHC------CCCCcceEEEECCCcc
Confidence 4799999999999999999998 8 79999998753
Done!