Query 006468
Match_columns 644
No_of_seqs 300 out of 1416
Neff 6.5
Searched_HMMs 29240
Date Tue Mar 26 01:50:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006468.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006468hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4e8d_A Glycosyl hydrolase, fam 100.0 6.5E-89 2.2E-93 761.1 34.1 385 1-523 173-586 (595)
2 3d3a_A Beta-galactosidase; pro 100.0 4.9E-85 1.7E-89 740.8 31.6 401 2-535 180-601 (612)
3 3thd_A Beta-galactosidase; TIM 100.0 5.1E-84 1.7E-88 727.1 27.2 392 2-523 184-620 (654)
4 1tg7_A Beta-galactosidase; TIM 100.0 5.1E-65 1.7E-69 599.7 27.6 481 1-521 183-946 (971)
5 3og2_A Beta-galactosidase; TIM 100.0 2.4E-55 8.3E-60 510.0 38.0 479 1-521 202-978 (1003)
6 2jx9_A Latrophilin 1; lectin, 99.9 1.7E-24 5.7E-29 193.1 7.9 88 550-639 12-104 (106)
7 2zx2_A CSL3; lectin, rhamnose, 99.8 7.7E-22 2.6E-26 194.4 7.3 89 550-641 5-100 (195)
8 2zx2_A CSL3; lectin, rhamnose, 99.8 3.7E-21 1.3E-25 189.5 7.3 84 550-636 105-195 (195)
9 3fn9_A Putative beta-galactosi 97.2 0.0013 4.6E-08 75.9 11.9 99 263-367 58-160 (692)
10 3lpf_A Beta-glucuronidase; alp 97.1 0.0017 5.9E-08 73.8 11.5 98 263-367 65-181 (605)
11 3gm8_A Glycoside hydrolase fam 97.1 0.0017 5.7E-08 76.3 11.2 96 264-368 65-160 (801)
12 3hn3_A Beta-G1, beta-glucuroni 97.0 0.0016 5.4E-08 74.2 9.7 76 263-342 75-155 (613)
13 3cmg_A Putative beta-galactosi 96.9 0.0037 1.3E-07 71.9 11.9 98 263-367 47-148 (667)
14 3bga_A Beta-galactosidase; NYS 96.7 0.005 1.7E-07 74.0 11.3 95 264-367 125-223 (1010)
15 1yq2_A Beta-galactosidase; gly 96.4 0.0064 2.2E-07 73.2 9.4 98 264-368 117-219 (1024)
16 1jz7_A Lactase, beta-galactosi 96.2 0.0098 3.4E-07 71.5 9.3 96 264-367 118-217 (1023)
17 2vzs_A CSXA, EXO-beta-D-glucos 96.2 0.007 2.4E-07 73.0 8.0 98 264-367 118-224 (1032)
18 3oba_A Beta-galactosidase; TIM 96.2 0.0082 2.8E-07 72.2 8.5 100 264-368 111-211 (1032)
19 3fn9_A Putative beta-galactosi 95.7 0.016 5.5E-07 66.9 7.8 66 414-506 59-128 (692)
20 3lpf_A Beta-glucuronidase; alp 95.5 0.028 9.7E-07 63.8 9.0 65 414-505 66-134 (605)
21 1kwg_A Beta-galactosidase; TIM 95.5 0.035 1.2E-06 63.4 9.6 87 41-139 305-391 (645)
22 2je8_A Beta-mannosidase; glyco 95.2 0.025 8.4E-07 66.9 7.4 71 266-341 65-135 (848)
23 3cmg_A Putative beta-galactosi 95.1 0.044 1.5E-06 62.9 9.1 66 414-506 48-117 (667)
24 3gm8_A Glycoside hydrolase fam 94.9 0.045 1.5E-06 64.2 8.3 66 414-506 65-133 (801)
25 3hn3_A Beta-G1, beta-glucuroni 94.7 0.027 9.3E-07 64.0 5.7 66 414-506 76-151 (613)
26 2je8_A Beta-mannosidase; glyco 94.6 0.043 1.5E-06 64.8 7.1 64 416-506 65-132 (848)
27 3bga_A Beta-galactosidase; NYS 94.3 0.07 2.4E-06 64.1 8.2 66 414-506 125-193 (1010)
28 3og2_A Beta-galactosidase; TIM 94.1 0.18 6.3E-06 59.7 10.9 40 415-454 711-752 (1003)
29 1yq2_A Beta-galactosidase; gly 93.8 0.079 2.7E-06 63.8 7.3 66 414-506 117-188 (1024)
30 1jz7_A Lactase, beta-galactosi 93.4 0.088 3E-06 63.4 6.8 66 414-506 118-187 (1023)
31 3oba_A Beta-galactosidase; TIM 93.1 0.077 2.7E-06 63.8 5.6 66 414-506 111-180 (1032)
32 1tg7_A Beta-galactosidase; TIM 93.1 0.27 9.3E-06 58.6 10.2 77 263-343 849-932 (971)
33 2vzs_A CSXA, EXO-beta-D-glucos 91.4 0.28 9.5E-06 59.2 7.6 69 414-506 118-187 (1032)
34 2okx_A Rhamnosidase B; alpha b 81.9 2.6 8.8E-05 50.3 8.3 66 415-505 22-92 (956)
35 3tty_A Beta-GAL, beta-galactos 81.9 4.5 0.00016 46.3 10.1 94 38-142 297-390 (675)
36 2okx_A Rhamnosidase B; alpha b 77.4 13 0.00044 44.3 12.4 106 264-381 21-131 (956)
37 3cih_A Putative alpha-rhamnosi 70.1 5.3 0.00018 46.1 6.4 38 414-454 56-93 (739)
38 3d3a_A Beta-galactosidase; pro 60.8 19 0.00063 40.8 8.3 70 264-343 506-575 (612)
39 2y24_A Xylanase; hydrolase, GH 57.7 48 0.0016 34.9 10.6 110 39-177 214-326 (383)
40 2nt0_A Glucosylceramidase; cer 56.1 28 0.00095 38.2 8.6 148 37-198 329-490 (497)
41 2wnw_A Activated by transcript 45.9 64 0.0022 34.8 9.4 143 37-198 283-438 (447)
42 4e8d_A Glycosyl hydrolase, fam 43.3 54 0.0019 36.8 8.3 70 264-343 504-573 (595)
43 3kl0_A Glucuronoxylanase XYNC; 34.4 2.4E+02 0.0083 29.8 11.5 81 37-137 218-299 (401)
44 3cih_A Putative alpha-rhamnosi 34.4 27 0.00093 40.1 4.3 58 264-342 56-113 (739)
45 4aw7_A GH86A beta-porphyranase 33.3 26 0.00089 39.3 3.7 34 487-521 552-586 (591)
46 4esn_A Hypothetical protein; p 26.2 2.6E+02 0.0089 24.0 8.1 75 440-571 18-93 (104)
47 3thd_A Beta-galactosidase; TIM 26.1 1.6E+02 0.0055 33.4 8.6 76 263-343 523-600 (654)
48 1nkg_A Rhamnogalacturonase B; 25.3 63 0.0021 35.6 5.0 62 440-511 428-489 (508)
49 2bgo_A Endo-B1,4-mannanase 5C; 24.3 97 0.0033 28.2 5.2 46 300-346 66-113 (140)
50 2wz8_A Cellulosome protein doc 23.8 55 0.0019 30.0 3.6 13 496-508 120-132 (156)
51 2w3j_A Carbohydrate binding mo 22.6 89 0.0031 28.1 4.7 41 298-339 68-112 (145)
52 3e5a_B Targeting protein for X 21.5 28 0.00097 25.0 0.8 10 104-113 5-14 (44)
No 1
>4e8d_A Glycosyl hydrolase, family 35; TIM barrel, beta-propeller, glycohydrolase; 1.80A {Streptococcus pneumoniae} PDB: 4e8c_A
Probab=100.00 E-value=6.5e-89 Score=761.07 Aligned_cols=385 Identities=26% Similarity=0.474 Sum_probs=298.2
Q ss_pred CcccCCCcceEEEecCCC-------CC--cccccccC-cccc-ccc------CCCCCCC-CeeEeeecCccccccCCCCC
Q 006468 1 MAVGLDTGVPWVMCKEDD-------AP--DPVINSCN-GFYC-DAF------SPNKPYK-PTLWTEAWSGWFTEFGGAVH 62 (644)
Q Consensus 1 ~a~~~g~~vP~~~c~~~~-------~~--~~~i~t~n-g~~~-~~f------~~~~p~~-P~~~~E~~~Gwf~~Wg~~~~ 62 (644)
||+++||+|||+||++++ +. +++++||| |..| +.| .+.+|++ |+|++|||+||||+||++++
T Consensus 173 ~~~~~Gi~vpl~t~d~~~~~~~~~G~~~~~~~~~t~nfg~~~~~~~~~~~~~~~~~p~~~P~~~~Ef~~Gwfd~WG~~~~ 252 (595)
T 4e8d_A 173 LMEECGVTCPLFTSDGPWRATLKAGTLIEEDLFVTGNFGSKAPYNFSQMQEFFDEHGKKWPLMCMEFWDGWFNRWKEPII 252 (595)
T ss_dssp HHHHTTCCSCEEEEECSSHHHHHHHCCGGGTCEEEEEESSCHHHHHHHHHHHHHHTTCCCCCEEEEEECSCCCBTTSCCC
T ss_pred HHHHcCCcEEEEEccCcchhcccCCccCCCCeEEEeeCCCchhHhHHHHHHhhhcCCCCCCeEEEeeccccccccCCCCC
Confidence 467899999999999975 44 78999999 7776 333 3445888 99999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhCCceeeeeEEeccCCCCCCCCCCc-------ccccccCCCCCCcCCCCCchhHHHHHHHHHHH
Q 006468 63 RRPVQDLAFAVARFIQKGGSFFNYYMYHGGTNFGRTAGGPF-------ITTSYDYDAPLDEYGLMRQPKYGHLKQLHEAI 135 (644)
Q Consensus 63 ~~~~~~~~~~~~~~l~~g~s~~n~YM~hGGTNfG~~~G~~~-------~~TSYDy~Apl~E~G~~~~~ky~~lr~~~~~~ 135 (644)
.+++++++..++++|+.| + +||||||||||||||||+++ ++|||||||||+|+|++ ||||.+||+++..+
T Consensus 253 ~~~~~~~~~~~~~~l~~g-s-~N~YM~hGGTNfG~~~Ga~~~~~~~~p~~TSYDYdApi~E~G~~-t~Ky~~lr~~i~~~ 329 (595)
T 4e8d_A 253 TRDPKELADAVREVLEQG-S-INLYMFHGGTNFGFMNGCSARGTLDLPQVTSYDYDALLDEEGNP-TAKYLAVKKMMATH 329 (595)
T ss_dssp CCCHHHHHHHHHHHHHHS-E-EEEEEEECCBCCTTCBCEEEETTEEEEBCSBCCTTCSBCTTSCB-CHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcC-C-ceEEecccccCcccccCCCCCCCCCCCCCCccCCCCccCcCCCc-cHHHHHHHHHHHHh
Confidence 999999999999999999 6 79999999999999999862 47999999999999999 69999999997643
Q ss_pred HhhhccccCCCCcccCCCccceeeeeccCCcceeeEeeccCCccceEEEeCCeeeccCCCceeecCCCCceeeccceeee
Q 006468 136 KLCEYALVSSDPTVTSLGTYQQAHVFSAGQQKCAAFLSNYNTKSAARVTFNGRQYNLPPWSISILPDCKNVVFNTAKVAV 215 (644)
Q Consensus 136 ~~~~~~l~~~~p~~~~~~~~~~~~~y~~~~~~~~~Fl~n~~~~~~~~v~~~~~~~~l~~~sv~il~~~~~v~f~t~~v~~ 215 (644)
. .+...+. | ...++..|+ .|.+.. .+++ |+.
T Consensus 330 ~--~~~p~~~-P------~~~~~~~~~-------------------~v~l~~--------~~~L--------~~~----- 360 (595)
T 4e8d_A 330 F--SEYPQLE-P------LYKESMELD-------------------AIPLVE--------KVSL--------FET----- 360 (595)
T ss_dssp C--TTSCCCC-C------CCCCBCCEE-------------------EEEEEE--------EEEH--------HHH-----
T ss_pred C--CCCCCCC-C------CCCcccccc-------------------eEEecc--------cccH--------HHh-----
Confidence 1 1111110 1 112222222 111100 0000 111
Q ss_pred eeeeeeccccccccccccccccccccccCCCccccccchhhcCCCCCCccEEEEEEEeecCCCcccccCCCCceeeeCCc
Q 006468 216 QHTKMQMLPTGSKLLSWETYDEDISSLGESSTLTAIGLLEQINITRDTSDYLWYMTSVEISSSESFLRGGQKPTLTVESA 295 (644)
Q Consensus 216 ~~~~~~~~~~~~~~~~w~~~~e~~~~~~~~~~~~~~~~~Eql~~t~d~~Gyl~Y~t~i~~~~~~~~~~~g~~~~L~v~~~ 295 (644)
...+.+|+.+. .|.+||+|+| .+||+||||++..... ...|++.++
T Consensus 361 ----------------l~~l~~~~~s~-------~P~~mE~lgq---~~GyvlY~t~i~~~~~--------~~~L~~~~~ 406 (595)
T 4e8d_A 361 ----------------LDSLSSPVESL-------YPQKMEELGQ---SYGYLLYRTETNWDAE--------EERLRIIDG 406 (595)
T ss_dssp ----------------HHHHCCCEEES-------SCCBTGGGTC---CSSEEEEEEEEECSSS--------SEEEEEEEE
T ss_pred ----------------hhhcCCccccC-------CCCCHHHcCC---CcCeEEEEeccCCCCC--------CceeecCCC
Confidence 00123455543 4678999998 9999999999975422 247999999
Q ss_pred ceEEEEEECCEEEEEEEccccCcceEEeecccccCCC-CeEEEEEEecCccccccCC--CccccceeecEEEccccCCCc
Q 006468 296 GHAVHVFINGQFLGSAFGTRENRRFTFSGPANLRAGI-NKIALLSIAVGLPNVGLHY--ETWETGVRGAVVLHGLDHGNK 372 (644)
Q Consensus 296 ~D~a~Vfvng~~vG~~~~~~~~~~~~~~~~~~l~~g~-~~L~ILven~Gr~N~G~~~--~~~~KGI~G~V~l~g~~~~~~ 372 (644)
||||+|||||+++|++++......+.+ ....+. ++|+||||||||||||+.| ++++|||+|+|+|+++
T Consensus 407 ~Dra~Vfvdg~~~g~l~r~~~~~~i~~----~~~~~~~~~L~ILVEN~GRvNyG~~~~~~~~~KGi~g~V~l~~~----- 477 (595)
T 4e8d_A 407 RDRAQLYVDGQWVKTQYQTEIGEDIFY----QGKKKGLSRLDILIENMGRVNYGHKFLADTQRKGIRTGVCKDLH----- 477 (595)
T ss_dssp ESEEEEEETTEEEEEEEGGGTTSCEEE----CCCSSSEEEEEEEEECCCCCCSGGGTTCGGGSCEEEEEEEETTE-----
T ss_pred ceEEEEEECCEEEEEEEcccCcceEEe----ecCCCCCCEEEEEEEcCCCcccCcccCcCCCCCCCCCCeEECCE-----
Confidence 999999999999999998643232322 233444 7999999999999999988 5799999999999987
Q ss_pred cCccCCce-EeccCccccccccCCCCCCCCcccCCCccccccCCceEEEEEEeCCCCCCceEEEeCCCceEEEEECCeee
Q 006468 373 DLTWQKWS-YQVGLKGEAMNLVSPSEATSVDWTRGSLAAQGQQSLKWYKAYFDAPTGNEPLALDLRSMGKGQVWINGQSI 451 (644)
Q Consensus 373 ~L~~~~W~-~~~~l~ge~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~Yr~~F~~p~~~d~~~Ld~~g~gKG~vwVNG~nl 451 (644)
.|+ +|+ |.++|+. ...++|..... ..+|+||+++|++++..| |||||+||+||+||||||||
T Consensus 478 ~l~--~W~~~~L~l~~----------~~~~~~~~~~~----~~~P~fy~g~f~~~~~~D-TfLd~~gwgKG~v~VNG~nL 540 (595)
T 4e8d_A 478 FLL--NWKHYPLPLDN----------PEKIDFSKGWT----QGQPAFYAYDFTVEEPKD-TYLDLSEFGKGVAFVNGQNL 540 (595)
T ss_dssp ECC--CEEEEEECCCC----------GGGCCTTSCCC----TTSCEEEEEEEEESSCCB-EEEECTTCCEEEEEETTEEE
T ss_pred EcC--CcEEEeeccch----------hhhcccccccC----CCCCeEEEEEEEcCCCCC-EEEeCCCCceEEEEECCeee
Confidence 566 799 6887653 11233332211 246899999999977666 99999999999999999999
Q ss_pred eeeeeccccCCCCCCccCCCcCCccccCCCCCCceeeeecCcccccCCcceEEEEEecCCCCcceEEEeecc
Q 006468 452 GRYWMAYAKGDCKTCSYAGTFRPINCQRRCGHPTQRWYHVPRSWLKPTKNLLVVFEELGGDASRISLVKRSV 523 (644)
Q Consensus 452 GRYW~~~~~g~~~~~~~~G~~~~~~~~~~~~~PQqtlY~VP~~~Lk~g~N~ivvfE~~g~~~~~i~l~~~~~ 523 (644)
||||+ +| |||||| ||++|||+|+|+|||||+++.....|+|++.++
T Consensus 541 GRYW~------------~G-------------PQ~tLY-vP~~~Lk~G~NeIvvfEl~~~~~~~i~~~~~p~ 586 (595)
T 4e8d_A 541 GRFWN------------VG-------------PTLSLY-IPHSYLKEGANRIIIFETEGQYKEEIHLTRKPT 586 (595)
T ss_dssp EEEET------------TC-------------SBCEEE-ECGGGSCSEEEEEEEEESSSCCCSEEEEESSCC
T ss_pred ecccC------------CC-------------CeEEEE-ecHHHhCcCCceEEEEEecCCCCceEEeecccc
Confidence 99993 57 999999 999999999999999999987778899988864
No 2
>3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482}
Probab=100.00 E-value=4.9e-85 Score=740.77 Aligned_cols=401 Identities=26% Similarity=0.465 Sum_probs=307.5
Q ss_pred cccCCC-cceEEEecCCC-----CCcccccccCcccc-----cccC---CCCCCCCeeEeeecCccccccCCCCCCCCHH
Q 006468 2 AVGLDT-GVPWVMCKEDD-----APDPVINSCNGFYC-----DAFS---PNKPYKPTLWTEAWSGWFTEFGGAVHRRPVQ 67 (644)
Q Consensus 2 a~~~g~-~vP~~~c~~~~-----~~~~~i~t~ng~~~-----~~f~---~~~p~~P~~~~E~~~Gwf~~Wg~~~~~~~~~ 67 (644)
+++.|+ +||++||+++. ..+++++|+| |.+ ++|. +.+|++|+|++|||+||||+||++++.++++
T Consensus 180 l~~~g~~~vp~~~~~~~~~~~~~~~~~~~~t~n-f~s~~~~~~~~~~~~~~~p~~P~~~~E~~~Gwf~~wg~~~~~~~~~ 258 (612)
T 3d3a_A 180 VKQAGFTGVPLFQCDWNSNFENNALDDLLWTIN-FGTGANIDEQFKRLKELRPDTPLMCSEFWSGWFDHWGAKHETRSAE 258 (612)
T ss_dssp HHHHTCCSSCEEEEECTTTGGGTCCTTSEEEEE-EETTCCHHHHHHHHHHHCTTSCCEEEEEECSCCCBTTSCCCCCCHH
T ss_pred HHHcCCCchhheecccccccccCCCCCcccccc-cCCCccHHHHHHHHHHhccCCCceeeccccCccccccCCCccCCHH
Confidence 566786 99999999742 3566777887 553 3343 6789999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCceeeeeEEeccCCCCCCCCC--C-c--ccccccCCCCCCcCCCCCchhHHHHHHHHHHHHhhhccc
Q 006468 68 DLAFAVARFIQKGGSFFNYYMYHGGTNFGRTAGG--P-F--ITTSYDYDAPLDEYGLMRQPKYGHLKQLHEAIKLCEYAL 142 (644)
Q Consensus 68 ~~~~~~~~~l~~g~s~~n~YM~hGGTNfG~~~G~--~-~--~~TSYDy~Apl~E~G~~~~~ky~~lr~~~~~~~~~~~~l 142 (644)
+++..++++|+.|+| +||||||||||||+|+|| + + ++|||||||||+|+|++ ||||.+||+++.. + +
T Consensus 259 ~~~~~~~~~l~~g~s-~n~YM~hGGTNfG~~~ga~~~~~~~~~tSYDy~Apl~E~g~~-~~ky~~lr~~~~~---~---~ 330 (612)
T 3d3a_A 259 ELVKGMKEMLDRNIS-FSLYMTHGGTSFGHWGGANFPNFSPTCTSYDYDAPINESGKV-TPKYLEVRNLLGN---Y---L 330 (612)
T ss_dssp HHHHHHHHHHTTTCE-EEEECSBCCBCCTTCBCEETTTTEEBCSBCCTTCSBCTTSCC-CHHHHHHHHHHTT---S---S
T ss_pred HHHHHHHHHHHcCCc-eEeeeeecccCCCcccccCCCCccceeeeeccCCccCcCCCc-cHHHHHHHHHHHH---h---c
Confidence 999999999999999 599999999999999987 3 4 79999999999999999 7999999988642 1 1
Q ss_pred cCCCCcccCCCccceeeeeccCCcceeeEeeccCCccceEEEeCCeeeccCCCceeecCCCCceeeccceeeeeeeeeec
Q 006468 143 VSSDPTVTSLGTYQQAHVFSAGQQKCAAFLSNYNTKSAARVTFNGRQYNLPPWSISILPDCKNVVFNTAKVAVQHTKMQM 222 (644)
Q Consensus 143 ~~~~p~~~~~~~~~~~~~y~~~~~~~~~Fl~n~~~~~~~~v~~~~~~~~l~~~sv~il~~~~~v~f~t~~v~~~~~~~~~ 222 (644)
+...+.+ +.+.+.++. .++++++ .++
T Consensus 331 ~~~~~~~-~~p~~~~~~-------------------------------~~~~~~~----------~~~------------ 356 (612)
T 3d3a_A 331 PEGETLP-EIPDSIPTI-------------------------------AIPTIKM----------TEM------------ 356 (612)
T ss_dssp CTTCCCC-CCCCCCCBC-------------------------------CEEEEEC----------CEE------------
T ss_pred ccCCCcC-CCCCCCccc-------------------------------ccccEEE----------eee------------
Confidence 1111111 111111111 1111111 011
Q ss_pred cccccccccccccccccccccCCCccccccchhhcCCCCCCccEEEEEEEeecCCCcccccCCCCceeeeCCcceEEEEE
Q 006468 223 LPTGSKLLSWETYDEDISSLGESSTLTAIGLLEQINITRDTSDYLWYMTSVEISSSESFLRGGQKPTLTVESAGHAVHVF 302 (644)
Q Consensus 223 ~~~~~~~~~w~~~~e~~~~~~~~~~~~~~~~~Eql~~t~d~~Gyl~Y~t~i~~~~~~~~~~~g~~~~L~v~~~~D~a~Vf 302 (644)
+..|+.+.+|+.+. .|.+||||+| .+||+||||+|..... ...|++.+++|+|+||
T Consensus 357 ------~~l~~~~~~~~~~~-------~p~~~E~l~q---~~gy~lY~t~i~~~~~--------~~~L~i~~~~D~a~Vf 412 (612)
T 3d3a_A 357 ------AVLFDNLPHPKESE-------DIRTMEAFDQ---GWGSILYRTSLSASDK--------EQTLLITEAHDWAQVF 412 (612)
T ss_dssp ------EEGGGGCCCCEEES-------SCCBGGGGTC---CSSEEEEEEEECCBSS--------CEEEEEEEEESEEEEE
T ss_pred ------eeHHHhCCCcccCC-------CCCCHHHhCC---CCCeEEEEEEecCCCC--------CceEEecCCCeEEEEE
Confidence 12355556666543 4678999999 7899999999976322 2479999999999999
Q ss_pred ECCEEEEEEEccccCcceEEeecccccCCCCeEEEEEEecCccccccCCCccccceeecEEEccccCCCccCccCCce-E
Q 006468 303 INGQFLGSAFGTRENRRFTFSGPANLRAGINKIALLSIAVGLPNVGLHYETWETGVRGAVVLHGLDHGNKDLTWQKWS-Y 381 (644)
Q Consensus 303 vng~~vG~~~~~~~~~~~~~~~~~~l~~g~~~L~ILven~Gr~N~G~~~~~~~KGI~G~V~l~g~~~~~~~L~~~~W~-~ 381 (644)
|||+++|++++......+.+ ++..+.++|+||||||||+|||+.| +++|||+|+|+|++ ..+..+|+ +|+ |
T Consensus 413 vng~~~G~~~~~~~~~~~~~----~~~~~~~~L~iLven~Gr~NyG~~~-~~~kGi~g~V~l~~-~~~~~~l~--~W~~y 484 (612)
T 3d3a_A 413 LNGKKLATLSRLKGEGVVKL----PPLKEGDRLDILVEAMGRMNFGKGI-YDWKGITEKVELQS-DKGVELVK--DWQVY 484 (612)
T ss_dssp ETTEEEEEEETTTTCCEEEE----CCBCTTEEEEEEEECCCCCCSGGGG-CCCCEEEEEEEEEE-TTEEEECC--CEEEE
T ss_pred ECCEEEEEEEcccCCceEEe----ecCCCCcEEEEEEEecCCCccCccc-cCCCCCCcceEEcC-CcCceecc--CceEE
Confidence 99999999988543333332 3445678999999999999999998 89999999999988 22233676 799 7
Q ss_pred eccCccccccccCCCCCCCCcccCCCccccccCCceEEEEEEeCCCCCCceEEEeCCCceEEEEECCeeeeeeeeccccC
Q 006468 382 QVGLKGEAMNLVSPSEATSVDWTRGSLAAQGQQSLKWYKAYFDAPTGNEPLALDLRSMGKGQVWINGQSIGRYWMAYAKG 461 (644)
Q Consensus 382 ~~~l~ge~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~Yr~~F~~p~~~d~~~Ld~~g~gKG~vwVNG~nlGRYW~~~~~g 461 (644)
+++|++|.. ..++|...... ..+|+|||++|++|++.| |||||+|||||+||||||||||||+
T Consensus 485 ~l~l~~~~~--------~~~~~~~~~~~---~~~p~~yk~~f~~~~~~D-t~Ld~~g~gKG~vwVNG~nlGRYW~----- 547 (612)
T 3d3a_A 485 TIPVDYSFA--------RDKQYKQQENA---ENQPAYYRSTFNLNELGD-TFLNMMNWSKGMVWVNGHAIGRYWE----- 547 (612)
T ss_dssp EECCCHHHH--------HSSCCBC--------CCCEEEEEEEEESSCCB-EEEECTTCCEEEEEETTEEEEEEET-----
T ss_pred EeccCcccc--------ccccccccCCC---CCCCEEEEEEEECCCCCc-EEEecCCCCcEEEEECCEeEEeEEe-----
Confidence 999887632 13456443211 236899999999998777 9999999999999999999999993
Q ss_pred CCCCCccCCCcCCccccCCCCCCceeeeecCcccccCCcceEEEEEecCCCCcceEEEeecc-cccccccccCCC
Q 006468 462 DCKTCSYAGTFRPINCQRRCGHPTQRWYHVPRSWLKPTKNLLVVFEELGGDASRISLVKRSV-ARVCADAHEHHP 535 (644)
Q Consensus 462 ~~~~~~~~G~~~~~~~~~~~~~PQqtlY~VP~~~Lk~g~N~ivvfE~~g~~~~~i~l~~~~~-~~~c~~~~e~~p 535 (644)
+| |||||| ||++|||+|+|+||||||++.....|+|.+.++ +++-.+.++.|+
T Consensus 548 -------~G-------------PqqtlY-vP~~~Lk~g~N~ivvfE~~~~~~~~i~~~~~p~~~~~~~~~~~~~~ 601 (612)
T 3d3a_A 548 -------IG-------------PQQTLY-VPGCWLKKGENEIIILDMAGPSKAETEGLRQPILDVQRGNGAYAHR 601 (612)
T ss_dssp -------TC-------------SCCEEE-ECGGGCCSEEEEEEEEESSCCSSSEEEEESSCCCSCCCSSCSSCGG
T ss_pred -------cC-------------CEEEEE-ecHHHcCCCCcEEEEEEEcCCCCceEEeecccccCCCccccccccc
Confidence 57 999999 999999999999999999998888999998854 344445545553
No 3
>3thd_A Beta-galactosidase; TIM-barrel domain, glycosyl hydrolase, glycosylation, hydrolase; HET: NAG DGJ; 1.79A {Homo sapiens} PDB: 3thc_A*
Probab=100.00 E-value=5.1e-84 Score=727.05 Aligned_cols=392 Identities=24% Similarity=0.360 Sum_probs=281.1
Q ss_pred ccc-CCCcceEEEecCCC-------CCcccccccC-cc--cc-cc---cCCCCCCCCeeEeeecCccccccCCCCCCCCH
Q 006468 2 AVG-LDTGVPWVMCKEDD-------APDPVINSCN-GF--YC-DA---FSPNKPYKPTLWTEAWSGWFTEFGGAVHRRPV 66 (644)
Q Consensus 2 a~~-~g~~vP~~~c~~~~-------~~~~~i~t~n-g~--~~-~~---f~~~~p~~P~~~~E~~~Gwf~~Wg~~~~~~~~ 66 (644)
+++ +||+||++||++++ .+++++.|.| |- .. +. +++.+|++|+|++|||+||||+||++++.+++
T Consensus 184 ~~~~~Gi~v~l~t~D~~~~~~~~~g~~~g~~~t~~f~~~~~~~~~~~~~~~~~p~~P~~~~Ef~~Gwfd~WG~~~~~~~~ 263 (654)
T 3thd_A 184 FRHHLGDDVVLFTTDGAHKTFLKCGALQGLYTTVDFGTGSNITDAFLSQRKCEPKGPLINSEFYTGWLDHWGQPHSTIKT 263 (654)
T ss_dssp HHHHHCSSSEEEEEEESSHHHHHHHCBTTBEEEEECCTTSCHHHHHHHHHHHCSSSCCEEEEEESSCCCCTTSCCCCCCH
T ss_pred HHHhcCCceeeEeecCCccccccCCCcCCcceecccCCCccHHHHHHHHHHhCCCCCeEEeccccccCCcCCCCCCCCCH
Confidence 455 49999999999864 2244444433 11 11 11 23567999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCceeeeeEEeccCCCCCCCCCC--c--ccccccCCCCCCcCCCCCchhHHHHHHHHHHHHhhhccc
Q 006468 67 QDLAFAVARFIQKGGSFFNYYMYHGGTNFGRTAGGP--F--ITTSYDYDAPLDEYGLMRQPKYGHLKQLHEAIKLCEYAL 142 (644)
Q Consensus 67 ~~~~~~~~~~l~~g~s~~n~YM~hGGTNfG~~~G~~--~--~~TSYDy~Apl~E~G~~~~~ky~~lr~~~~~~~~~~~~l 142 (644)
++++..++++|+.|+| +|||||||||||||||||+ + ++|||||||||+|+|++ ||||.+||+++. .+.+..
T Consensus 264 ~~~~~~~~~~l~~g~s-~N~YM~hGGTNfG~~~Ga~~~~~~~~TSYDYdApi~E~G~~-t~Ky~~lr~li~---~~~~~~ 338 (654)
T 3thd_A 264 EAVASSLYDILARGAS-VNLYMFIGGTNFAYWNGANSPYAAQPTSYDYDAPLSEAGDL-TEKYFALRNIIQ---KFEKVP 338 (654)
T ss_dssp HHHHHHHHHHHHTTCE-EEEECSBCCBCCTTCBCEETTTEECCSBCCTTCSBCTTCCB-CHHHHHHHHHHT---TTSCCC
T ss_pred HHHHHHHHHHHhcCCc-eEEEecccccccccccCCCCCCCCccccCcCCCccccccCc-cHHHHHHHHHHH---HhcCCC
Confidence 9999999999999998 6999999999999999986 3 79999999999999999 699999998753 332221
Q ss_pred cCCCCcccCCCccceeeeeccCCcceeeEeeccCCccceEEEeCCeeeccCCCceeecCCCCceeeccceeeeeeeeeec
Q 006468 143 VSSDPTVTSLGTYQQAHVFSAGQQKCAAFLSNYNTKSAARVTFNGRQYNLPPWSISILPDCKNVVFNTAKVAVQHTKMQM 222 (644)
Q Consensus 143 ~~~~p~~~~~~~~~~~~~y~~~~~~~~~Fl~n~~~~~~~~v~~~~~~~~l~~~sv~il~~~~~v~f~t~~v~~~~~~~~~ 222 (644)
.+. .++..++..|+ .|.+.. .++
T Consensus 339 ~~~------~P~~~p~~~~~-------------------~v~l~~---~~~----------------------------- 361 (654)
T 3thd_A 339 EGP------IPPSTPKFAYG-------------------KVTLEK---LKT----------------------------- 361 (654)
T ss_dssp CSC------CCCCCCBCCCE-------------------EEECEE---EEE-----------------------------
T ss_pred CCC------CCCCCcccccC-------------------cEeecc---ccc-----------------------------
Confidence 111 11112222222 111100 011
Q ss_pred ccccccccccccc---c--cccccccCCCccccccchhhcCCCCCCccEEEEEEEeecCCCcccccCCCCceee--eCCc
Q 006468 223 LPTGSKLLSWETY---D--EDISSLGESSTLTAIGLLEQINITRDTSDYLWYMTSVEISSSESFLRGGQKPTLT--VESA 295 (644)
Q Consensus 223 ~~~~~~~~~w~~~---~--e~~~~~~~~~~~~~~~~~Eql~~t~d~~Gyl~Y~t~i~~~~~~~~~~~g~~~~L~--v~~~ 295 (644)
.|+.+ . +|+.+. .|.+||+|+| .+||+||||++.....+ ...|+ +.++
T Consensus 362 --------L~~~l~~l~~~~~~~s~-------~P~tmE~l~Q---~~GyvlY~t~i~~~~~~-------~~~l~l~~~~v 416 (654)
T 3thd_A 362 --------VGAALDILCPSGPIKSL-------YPLTFIQVKQ---HYGFVLYRTTLPQDCSN-------PAPLSSPLNGV 416 (654)
T ss_dssp --------TTTTHHHHCTTCCEEES-------SCCBTGGGTC---CSSEEEEEEECSSCEEE-------EEEEECTTCCE
T ss_pred --------HHHHHHhhCcCCCcccC-------CCCCHHHhCC---CcCeEEEEeecCCCCCC-------CcceeeccCCc
Confidence 11111 1 244442 4678999998 99999999999643211 11344 5889
Q ss_pred ceEEEEEECCEEEEEEEccccCcceEEeecccccCCCCeEEEEEEecCccccccCCCccccceeecEEEccccCCCccCc
Q 006468 296 GHAVHVFINGQFLGSAFGTRENRRFTFSGPANLRAGINKIALLSIAVGLPNVGLHYETWETGVRGAVVLHGLDHGNKDLT 375 (644)
Q Consensus 296 ~D~a~Vfvng~~vG~~~~~~~~~~~~~~~~~~l~~g~~~L~ILven~Gr~N~G~~~~~~~KGI~G~V~l~g~~~~~~~L~ 375 (644)
||||+|||||+++|++++.. ...+++ ..+. .++|+||||||||||||+.| +++|||+|+|+|+++ .|+
T Consensus 417 ~Dra~Vfvdg~~~G~l~r~~---~~~l~~--~~~~-~~~L~ILVEN~GRvNyG~~i-~d~KGi~g~V~l~~~-----~l~ 484 (654)
T 3thd_A 417 HDRAYVAVDGIPQGVLERNN---VITLNI--TGKA-GATLDLLVENMGRVNYGAYI-NDFKGLVSNLTLSSN-----ILT 484 (654)
T ss_dssp ESEEEEEETTEEEEEEETTT---BCEEEE--EECT-TCEEEEEEECCCCBCSSGGG-CCCCEECSCCEETTE-----ECC
T ss_pred ceEEEEEECCEEEEEEeccc---ceeEec--cCCC-CCEEEEEEEcCCccccCCCC-CCCCCCCCceEECCE-----EcC
Confidence 99999999999999999743 133332 2333 36899999999999999988 689999999999987 566
Q ss_pred cCCce-EeccCccccccccCC------CCCCCCcccCCCccccccCCceEEEEEEeCCCCC----CceEEEeCCCceEEE
Q 006468 376 WQKWS-YQVGLKGEAMNLVSP------SEATSVDWTRGSLAAQGQQSLKWYKAYFDAPTGN----EPLALDLRSMGKGQV 444 (644)
Q Consensus 376 ~~~W~-~~~~l~ge~~~~~~~------~~~~~~~W~~~~~~~~~~~~~~~Yr~~F~~p~~~----d~~~Ld~~g~gKG~v 444 (644)
+|+ |.++|+..... ... .......|.... .. ..+|+||+++|++++.. .+|||||+||+||+|
T Consensus 485 --~W~~~~L~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~-~~~P~fy~g~f~i~~~~~~~p~DTFLd~~gWgKGvV 558 (654)
T 3thd_A 485 --DWTIFPLDTEDAVRS-HLGGWGHRDSGHHDEAWAHNS--SN-YTLPAFYMGNFSIPSGIPDLPQDTFIQFPGWTKGQV 558 (654)
T ss_dssp --CEEEEECCHHHHHHT-TTTTTCCC----------------C-CCCCEEEEEEECCCSSCTTCSCBEEEECTTCCSEEE
T ss_pred --CcEEEeeccchhhhh-hhccccccccccccccccccc--cC-CCCCEEEEEEEEccCCCCCCCCCEEEeCCCCCeEEE
Confidence 799 57766532110 000 000001122211 11 34689999999997531 249999999999999
Q ss_pred EECCeeeeeeeeccccCCCCCCccCCCcCCccccCCCCCCceeeeecCcccccCC-cceEEEEEecCCCC-------cce
Q 006468 445 WINGQSIGRYWMAYAKGDCKTCSYAGTFRPINCQRRCGHPTQRWYHVPRSWLKPT-KNLLVVFEELGGDA-------SRI 516 (644)
Q Consensus 445 wVNG~nlGRYW~~~~~g~~~~~~~~G~~~~~~~~~~~~~PQqtlY~VP~~~Lk~g-~N~ivvfE~~g~~~-------~~i 516 (644)
|||||||||||+. +| |||||| ||++|||+| +|+|||||+++... ..|
T Consensus 559 ~VNG~NLGRYW~~-----------~G-------------PQ~TLY-vP~p~Lk~G~~NeIiVfEle~~~~~~~~~~~~~i 613 (654)
T 3thd_A 559 WINGFNLGRYWPA-----------RG-------------PQLTLF-VPQHILMTSAPNTITVLELEWAPCSSDDPELCAV 613 (654)
T ss_dssp EETTEEEEEECTT-----------TC-------------SCCCEE-ECGGGCCSSSCEEEEEEESSCCSCSSSCGGGSEE
T ss_pred EECCcccccccCC-----------CC-------------CeEEEE-ecHHHhCCCCCceEEEEEeecCCccccccccceE
Confidence 9999999999975 47 999999 999999997 99999999987542 469
Q ss_pred EEEeecc
Q 006468 517 SLVKRSV 523 (644)
Q Consensus 517 ~l~~~~~ 523 (644)
+|.+.++
T Consensus 614 ~~~~~P~ 620 (654)
T 3thd_A 614 TFVDRPV 620 (654)
T ss_dssp EEESSCC
T ss_pred Eeecccc
Confidence 9988864
No 4
>1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A*
Probab=100.00 E-value=5.1e-65 Score=599.66 Aligned_cols=481 Identities=24% Similarity=0.356 Sum_probs=341.7
Q ss_pred CcccCCCcceEEEecCCC----CCc---ccccccC------ccccc----------------ccCCCCCCCCeeEeeecC
Q 006468 1 MAVGLDTGVPWVMCKEDD----APD---PVINSCN------GFYCD----------------AFSPNKPYKPTLWTEAWS 51 (644)
Q Consensus 1 ~a~~~g~~vP~~~c~~~~----~~~---~~i~t~n------g~~~~----------------~f~~~~p~~P~~~~E~~~ 51 (644)
||+++|++|||+||+++. ... +.++..+ |++|. .++..+|++|+|+||||+
T Consensus 183 ~~r~~g~~vPl~tn~~~~~~~~~~~~~~g~ldv~~~D~Yp~g~~~~~~~~~~~~~~~~~~~d~~r~~~p~~P~~~~E~~~ 262 (971)
T 1tg7_A 183 HARDAGIVVPFISNDAWAAGHNAPGTGAGAVDIYGHDSYPLGFDCANPSTWPSGNLPTYFHTSHEQQSPSTPYSLVEFQG 262 (971)
T ss_dssp HHHHTTCCSCBBCCBSSSSCTTCTTSCTTCCSBCEEEECTTCSCCSCTTCCCTTCSCCCHHHHHHHHCTTSCCEEEEEES
T ss_pred HHHHhCCCeeEEEecCccccccccccccCceeEEecCCCccccccCCcccccccccchhHHHHhhccCCCCCEEEEecCC
Confidence 578899999999999852 111 2222111 34441 112456789999999999
Q ss_pred ccccccCCCCCCCCHHHH----HHHH-HHHHHhCCceeeeeEEeccCCCCCCCCCCcccccccCCCCCCcCCCCCc-hhH
Q 006468 52 GWFTEFGGAVHRRPVQDL----AFAV-ARFIQKGGSFFNYYMYHGGTNFGRTAGGPFITTSYDYDAPLDEYGLMRQ-PKY 125 (644)
Q Consensus 52 Gwf~~Wg~~~~~~~~~~~----~~~~-~~~l~~g~s~~n~YM~hGGTNfG~~~G~~~~~TSYDy~Apl~E~G~~~~-~ky 125 (644)
|||++||+.++.+++++. +..+ .++|++|++++||||||||||||+++| +.++|||||+|||+|+|++ | +||
T Consensus 263 Gw~~~Wg~~~~~~~~~~~~~~~~~~~~~~~la~Ga~~vnyYm~~GGTNfG~~~g-~~~~tSYDy~Apl~E~G~~-t~~ky 340 (971)
T 1tg7_A 263 GAFDPWGGVGFAKCAALLNHEFERVFYKNDFSFGVAFLNLYMIFGGTNWGNLGH-PGGYTSYDYGSAISESRNI-TREKY 340 (971)
T ss_dssp SCCCCTTCCCHHHHHHHTSHHHHHHHHHHHHTTTCSEEEEECSBCCBCCTTCBC-TTSCSBCCTTCSBCTTCCC-CSHHH
T ss_pred cCccCCCCCccccccccChHHHHHHHHHHHHHCCCCEEEEEEeecccCCcccCC-CCcceeeccCceeCcCCCc-chhHH
Confidence 999999998766655544 3332 478889999899999999999999965 5689999999999999999 7 999
Q ss_pred HHHHHHHHHHHhhhccccCCCCccc--------------CCCc--cceeeee----------------------------
Q 006468 126 GHLKQLHEAIKLCEYALVSSDPTVT--------------SLGT--YQQAHVF---------------------------- 161 (644)
Q Consensus 126 ~~lr~~~~~~~~~~~~l~~~~p~~~--------------~~~~--~~~~~~y---------------------------- 161 (644)
.++|+|+++|+.+++. +.++|... .+.. ...+..|
T Consensus 341 ~elr~l~~~l~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~a~f~~~r~~~~~~~~~~~~~l~v~ts~g~~~i 419 (971)
T 1tg7_A 341 SELKLLGNFAKVSPGY-LVANPGDLSTSTYTNTADLTVTPLLGSNSSASSFFVIRHSDYSSQASVEYKLTVPTSAGNLTI 419 (971)
T ss_dssp HHHHHHHHHHHTCHHH-HTSEECCCBSSSSBSCTTEEEEEEECSSTTSCEEEEEEESSTTCCCCEEECEEEEETTEEEEE
T ss_pred HHHHHHHHHHHhChHh-hccCCccCccccccCCCceEEEEeecCCCCceEEEEEeccCCCCCCceEEEEEEecCCCCEec
Confidence 9999999999988763 33332110 0100 0101111
Q ss_pred ------------------------------------c--cCC----------------------------cce-e-----
Q 006468 162 ------------------------------------S--AGQ----------------------------QKC-A----- 169 (644)
Q Consensus 162 ------------------------------------~--~~~----------------------------~~~-~----- 169 (644)
. ..+ ..| .
T Consensus 420 P~~~g~i~l~gr~ski~~~d~~~g~~~l~ysTa~~~t~~~~~~~~v~vly~~~g~~~e~~~~~~~~~~~~~g~~~~~~~~ 499 (971)
T 1tg7_A 420 PQLGGSLTLSGRDSKIHVTDYDVAGTNILYSTAEVFTWKKFNNEKVLVLYGGPGEHHEFAVSGASSSSVVEGSSSGISSK 499 (971)
T ss_dssp CSSSSCEEECTTCCEEEEEEEEETTEEEEEESSEEEEEEEETTEEEEEEEECTTCEEEEEEETCCCCEEEESCCTTCEEE
T ss_pred cCCCCceEECCCceEEEecccccCCeEEEEeeeeeEEEEEECCceEEEEEcCCCCceEEEEecCcceeeecCcccceeEe
Confidence 0 000 001 1
Q ss_pred ----eEeeccCCccceE-EEeCCe-----------eeccCC----------------------------Cceee------
Q 006468 170 ----AFLSNYNTKSAAR-VTFNGR-----------QYNLPP----------------------------WSISI------ 199 (644)
Q Consensus 170 ----~Fl~n~~~~~~~~-v~~~~~-----------~~~l~~----------------------------~sv~i------ 199 (644)
.|+.|.......+ |.+++. .|-+|+ ||++|
T Consensus 500 ~~~~~~~~~~~~~~~~~~v~~~~~~v~lld~~~A~~~w~p~~~~~~~~~~~~~~~~~~~~v~v~g~ylvrsasi~~~~l~ 579 (971)
T 1tg7_A 500 KVGKALVVAWDVSTARRIVQVGSLKVFLLDRNSAYNYWVPQVPTKGTAPGYSNQETTASSIIVKAGYLVRSAYLDGNDLH 579 (971)
T ss_dssp EETTEEEEEEECCSSCEEEEETTEEEEEEEHHHHTTEECCCCCSSSSCCCCCSHHHHHTCCEEECSSEEEEEEEETTEEE
T ss_pred ccCceEEEeeccCCceEEEEECCEEEEEechHhhheEecccccCccccCcccccccCCceEEEecCcEEEEEEEeCCEEE
Confidence 2333322222222 555543 444555 88888
Q ss_pred -------------c--C-CCCceeeccceeeeeeeeee----ccc----cc----ccccccccccc---ccccccCCCcc
Q 006468 200 -------------L--P-DCKNVVFNTAKVAVQHTKMQ----MLP----TG----SKLLSWETYDE---DISSLGESSTL 248 (644)
Q Consensus 200 -------------l--~-~~~~v~f~t~~v~~~~~~~~----~~~----~~----~~~~~w~~~~e---~~~~~~~~~~~ 248 (644)
+ + +|++|.||+++|+.++.... ..+ .. ...+.|+...+ ..+.. .....
T Consensus 580 l~gd~~~~t~~ev~~~p~~~~~v~~Ng~~v~~~~~~~g~~~~~~~~~~~~~~~P~l~~l~Wk~~~~~pe~~~~~-dDs~W 658 (971)
T 1tg7_A 580 IQADFNATTPIEVVGAPSGAKNLVINGKKTQTKVDKNGIWSASVAYTAPKVQLPSLKSLKWKSVDTLPEAKNTY-DDSAW 658 (971)
T ss_dssp EEEEBSSCEEEEEESCCTTCCEEEETTEEECCEECTTCCEEEEECCCCCCCCCCCGGGSCCEEEESCGGGSTTC-CCTTS
T ss_pred EEeecCCCceEEEEecCCCccEEEECCEEceeEEccCccEEEecCCCcccccccccCCCCeEEeCCCccccCCC-CCCCc
Confidence 7 5 89999999999987665422 111 11 12346886654 22222 11222
Q ss_pred ccccchhhcCC----C----CCCccE------EEEEEEeecCCCcccccCCCCceeeeC---CcceEEEEEECCEEEEEE
Q 006468 249 TAIGLLEQINI----T----RDTSDY------LWYMTSVEISSSESFLRGGQKPTLTVE---SAGHAVHVFINGQFLGSA 311 (644)
Q Consensus 249 ~~~~~~Eql~~----t----~d~~Gy------l~Y~t~i~~~~~~~~~~~g~~~~L~v~---~~~D~a~Vfvng~~vG~~ 311 (644)
+.....|+.++ + .+.++| +|||++|.++.++ ..|.+. ++++.++|||||+++|+.
T Consensus 659 ~~~~l~~~~n~~~p~t~p~~~~~sdYGf~~G~lwYR~~F~~~~~~--------~~L~~~~~gG~~~~~~VwvNG~~lGs~ 730 (971)
T 1tg7_A 659 TSADHAYTNNSAHSLQTPTSLFASDYGYHTGALLFRGHFTANGKE--------KTFFVQTKGGTAYGHSIWINETYVGSW 730 (971)
T ss_dssp EECCCSSCCCTTCCCSSSSCCBGGGGTCCSSCEEEEEEEECCSCC--------CEEEEEEECSTTCCEEEEETTEEEEEE
T ss_pred eECCCcccccccCCCCCCccCCCCccCccCceEEEEEEEECCCcc--------eEEEEEecCcccceEEEEECCEEEeee
Confidence 23445555555 3 344445 9999999876543 478888 999999999999999999
Q ss_pred EccccC--cceEEeecccccC-CCCeEEEEEEecCcccc---ccCCCccccceeecEEEccccCCC--ccCccCCc--eE
Q 006468 312 FGTREN--RRFTFSGPANLRA-GINKIALLSIAVGLPNV---GLHYETWETGVRGAVVLHGLDHGN--KDLTWQKW--SY 381 (644)
Q Consensus 312 ~~~~~~--~~~~~~~~~~l~~-g~~~L~ILven~Gr~N~---G~~~~~~~KGI~G~V~l~g~~~~~--~~L~~~~W--~~ 381 (644)
.+.... .++.+++ ..|+. ++|+|+|||+|+|+.|+ |..++++++||. +|.|.+.+.+. ++|+.+.| .|
T Consensus 731 ~g~~~~~~~~~~~~l-~~L~~gg~NvI~Vlvdn~G~~nsWy~G~~~~~~~~GI~-~v~L~g~~~~~~~w~l~g~~~ge~~ 808 (971)
T 1tg7_A 731 AGTSINDNNNATYTL-PTLQSGKNYVITVVIDNMGLDEDWTIGSEDMKNPRGII-QYSLSGQEASAISWKLTGNLGGENY 808 (971)
T ss_dssp CCCTTCSEEEEEEEC-CCCCTTCEEEEEEEECCCCCCCCCSBTCCGGGCCCEEE-EEEETTSCGGGCEEEEESSTTTTSC
T ss_pred ecCCCcccCceEEEE-eEecCCCceEEEEEEecCCCCcccccCccccccCCcce-EEEEeccCCCCceEEEeeccccccc
Confidence 875431 1345555 46777 57999999999999999 988889999999 89998865444 77887788 67
Q ss_pred ---------eccCccccccccCCCCCCCCcccCCCcccc-ccCCceEEEEEEe--CCCCCC-ceEEEeCCCc------eE
Q 006468 382 ---------QVGLKGEAMNLVSPSEATSVDWTRGSLAAQ-GQQSLKWYKAYFD--APTGNE-PLALDLRSMG------KG 442 (644)
Q Consensus 382 ---------~~~l~ge~~~~~~~~~~~~~~W~~~~~~~~-~~~~~~~Yr~~F~--~p~~~d-~~~Ld~~g~g------KG 442 (644)
+.+|.+|++++|+| +.+..+|.+.+..+. ...+++|||++|+ +|++.| |+.|||..|+ ||
T Consensus 809 ~D~~RgplN~~GL~gE~~~w~~p-~~~~~~W~~~sp~~gl~~~Gv~wyr~~f~L~~p~g~d~pl~L~lg~~~~~~~~~~~ 887 (971)
T 1tg7_A 809 RDTVRGPLNEGGLYAERQGFHQP-QPPTQKWDSSSPFTGLTKPGIRFYSTSFDLDLPSGYDIPLYFNFGNSTSTPAAYRV 887 (971)
T ss_dssp SCTTTCSSSCCSSHHHHTTTTSS-SCCCTTSBCCCTTTCBSSSEEEEEEEEEECCCCTTEECCEEEEECCCCSSCCCEEE
T ss_pred cccccccccccccccccccccCC-CCCcccccCCCCcCCCCCCceEEEEEEEeccCCCCCCceEEEEcCCCCCCCccceE
Confidence 88899999999998 567788987643221 1345899999999 565556 7999999999 99
Q ss_pred EEEECCeeeeeeeeccccCCCCCCccCCCcCCccccCCCCCCceeeeecCcccc-cCCcceEEE----EEecCCCCcceE
Q 006468 443 QVWINGQSIGRYWMAYAKGDCKTCSYAGTFRPINCQRRCGHPTQRWYHVPRSWL-KPTKNLLVV----FEELGGDASRIS 517 (644)
Q Consensus 443 ~vwVNG~nlGRYW~~~~~g~~~~~~~~G~~~~~~~~~~~~~PQqtlY~VP~~~L-k~g~N~ivv----fE~~g~~~~~i~ 517 (644)
++||||++|||||+. +| ||++ ||||+.|| |+|+|+|+| +|+.|+++..|+
T Consensus 888 ~~~VNG~~iGry~~~-----------~~-------------pqr~-y~VP~giLn~~G~N~i~vrv~~~~~~Gg~~~~i~ 942 (971)
T 1tg7_A 888 QLYVNGYQYGKYVNN-----------IG-------------PQTS-FPVPEGILNYHGTNWLALSLWAQEDNGAKLDSFE 942 (971)
T ss_dssp EEEETTEEEEEEETT-----------TC-------------SCCE-EEECBTTBCTTSEEEEEEEEEECSTTCBCCSCEE
T ss_pred EEEECCEEEeeecCC-----------CC-------------CCEE-EECCHHHhCcCCccEEEEEEecCCCCCCCccceE
Confidence 999999999999975 45 8854 66999999 799999999 999999999999
Q ss_pred EEee
Q 006468 518 LVKR 521 (644)
Q Consensus 518 l~~~ 521 (644)
|++.
T Consensus 943 l~~~ 946 (971)
T 1tg7_A 943 LINT 946 (971)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 9988
No 5
>3og2_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family 35, glycoprot hydrolase; HET: NAG BMA MAN GLC; 1.20A {Trichoderma reesei} PDB: 3ogr_A* 3ogs_A* 3ogv_A*
Probab=100.00 E-value=2.4e-55 Score=510.00 Aligned_cols=479 Identities=21% Similarity=0.277 Sum_probs=297.2
Q ss_pred CcccCCCcceEEEecCCC----CCccccccc---------Ccccccc----------------cCCCCCCCCeeEeeecC
Q 006468 1 MAVGLDTGVPWVMCKEDD----APDPVINSC---------NGFYCDA----------------FSPNKPYKPTLWTEAWS 51 (644)
Q Consensus 1 ~a~~~g~~vP~~~c~~~~----~~~~~i~t~---------ng~~~~~----------------f~~~~p~~P~~~~E~~~ 51 (644)
||+++||+|||+||+++. +++.++.++ +|+.|.. +.+.+|++|+|++|||+
T Consensus 202 ~~~~~Gi~VPl~t~d~~~~~~~~~g~~~g~vdiyg~d~yp~g~~c~~~~~w~~~~~~~~~~~~~~~~~p~~P~~~~Ef~~ 281 (1003)
T 3og2_A 202 QARNAGIIVPLINNDAFPGGTGAPGTGLGSVDIYGHDGYPLGFDCAHPSAWPDNGLPTTWRQDHLNISPSTPFSLVEFQG 281 (1003)
T ss_dssp HHHHTTCCSCBBCCBSSSCCTTCTTSCTTCCSBCEEEECTTCSCTTSTTCCCTTCSCCCHHHHHHHHCTTSCCEEEEEES
T ss_pred HHHHcCCceEEEEcCCccccccCCCccccceeeeccccccCcccccCCcccccccchHHHHHHhhhcCCCCCeEEEeecc
Confidence 578899999999999873 333333333 5666631 22568999999999999
Q ss_pred ccccccCCCCCCCCHHHHHHHH-----HHHHHhCCceeeeeEEeccCCCCCCCCCCcccccccCCCCCCcCCCCCchhHH
Q 006468 52 GWFTEFGGAVHRRPVQDLAFAV-----ARFIQKGGSFFNYYMYHGGTNFGRTAGGPFITTSYDYDAPLDEYGLMRQPKYG 126 (644)
Q Consensus 52 Gwf~~Wg~~~~~~~~~~~~~~~-----~~~l~~g~s~~n~YM~hGGTNfG~~~G~~~~~TSYDy~Apl~E~G~~~~~ky~ 126 (644)
||||+||++++.+++++++..+ +++|+.|+|++||||||||||||||+ ++.++|||||||||+|+|+++||||.
T Consensus 282 GWfd~WG~~~~~~~~~~~~~~~~~~~~~~~l~~G~s~vN~YM~hGGTNFG~~~-~~~~~TSYDYdAPL~E~G~~~t~Ky~ 360 (1003)
T 3og2_A 282 GAFDPFGGWGFEQCSALVNHEFERVFYKNNMAAGVTIFNIYMTFGGTNWGNLG-HPGGYTSYDYGASIREDRRIDREKYS 360 (1003)
T ss_dssp SCCCCTTCCCHHHHHHHSSHHHHHHHHHHHHHTTCSEEEEEEEECCBCCTTCB-CTTSCSBCCTTCSBCTTCCCCSHHHH
T ss_pred ccccccCCCCCCCChhhhhHHHHHHHHHHHHhcCCceEEEEEeccccCccccC-CCCccccccCCCcccccCCcCchHHH
Confidence 9999999998888877666554 56788999989999999999999995 66789999999999999999779999
Q ss_pred HHHHHHHHHHhhhccccCCCCcccC---CCccceeeeec--cCCcceeeEeeccCC--ccc--eE---------------
Q 006468 127 HLKQLHEAIKLCEYALVSSDPTVTS---LGTYQQAHVFS--AGQQKCAAFLSNYNT--KSA--AR--------------- 182 (644)
Q Consensus 127 ~lr~~~~~~~~~~~~l~~~~p~~~~---~~~~~~~~~y~--~~~~~~~~Fl~n~~~--~~~--~~--------------- 182 (644)
+||+++.|++.+.. ++.++|...+ ...+....++. ...+..+.|+.+.+. +.. .+
T Consensus 361 ~lK~l~~fl~~~~~-~l~~~~~~~~~~~~~~~~~i~~t~lr~~~~~~Fyvvrh~~~~s~~~~~~~l~l~ts~G~~tiP~~ 439 (1003)
T 3og2_A 361 ELKLQGQFLKVSPG-YITATPENATQGVYSDSQNIVITPLLAKESGDFFVVRHANYSSTDTASYTVKLPTSAGDLTIPQL 439 (1003)
T ss_dssp HHHHHHHHHHTCTH-HHHSEECCCBSSSSSSCSSEEEEEEECSSSCEEEEEEESSTTCCSCEEECEEECCTTCCEEECTT
T ss_pred HHHHHHHHHhcChH-hhccccccCCCccccCCCceEEEEEecCCCceEEEEEccCCCCCCcceEEEEecCCCCcEEeCCC
Confidence 99999999987554 3333322111 11222222222 222345555532211 000 00
Q ss_pred ---EEeCCe-------------------------------------------e--eccCC-------CceeecC------
Q 006468 183 ---VTFNGR-------------------------------------------Q--YNLPP-------WSISILP------ 201 (644)
Q Consensus 183 ---v~~~~~-------------------------------------------~--~~l~~-------~sv~il~------ 201 (644)
|++++. . +.+.. .++.++.
T Consensus 440 ~g~ltL~grdskI~vtdy~~g~~~L~YSTAevlT~~~~~~~~vlvlyg~~Ge~~E~al~~~~~~~~~~~~~~~~~~~~~~ 519 (1003)
T 3og2_A 440 GGSLTLTGRDSKIHVTDYPVGKFTLLYSTAEIFTWNEFAEKTVLVLYGGAQELHEFAVKNPFGSSKTAKAKKIEGSNVTI 519 (1003)
T ss_dssp SCCEEECTTCEEEEEEEEEETTEEEEEESSEEEEEEECSSCEEEEEEECTTCEEEEEESCCSTTCSSCCCEEEECSSCEE
T ss_pred CCeEEECCccceEEeeccccCCeEEEEEccceEEEEEECCEEEEEEECCCCCceEEEEecccccccCCCCceecCCCeeE
Confidence 111110 0 00000 0000000
Q ss_pred --CCCc---eeecc------------------------------------------------ceeeeeeeeee-------
Q 006468 202 --DCKN---VVFNT------------------------------------------------AKVAVQHTKMQ------- 221 (644)
Q Consensus 202 --~~~~---v~f~t------------------------------------------------~~v~~~~~~~~------- 221 (644)
.... +-|.. .-|+...=.|+
T Consensus 520 ~~~~~~~~~~~~~~~~~~~vv~~~~l~v~l~dr~~A~~~W~~~~~~~~~~~~~~~~~~~~~~vlV~g~yLvRsA~~~g~~ 599 (1003)
T 3og2_A 520 HTTSNLTVVLQWTASSARQVVQLGSLVIYMVDRNSAYNYWVPTLPGSGKQSAYGSSLMNPDSVIINGGYLIRSVAIKGNA 599 (1003)
T ss_dssp EECTTCCEEEEEECCSSCEEEEETTEEEEEEEHHHHTTEECCBCCCSSTTGGGCSCSSSCCBCEEECCSEEEEEEEETTE
T ss_pred EecCCcEEEEEEecCCceEEEEECCEEEEEEehHHHhhhccccccCCCccccccccCCCCCcEEEECCeEEEEEEEcCCE
Confidence 0000 00000 00000000000
Q ss_pred ---------------c-cccc----------------------------------cc--ccccccc---ccccccc----
Q 006468 222 ---------------M-LPTG----------------------------------SK--LLSWETY---DEDISSL---- 242 (644)
Q Consensus 222 ---------------~-~~~~----------------------------------~~--~~~w~~~---~e~~~~~---- 242 (644)
+ .|.. .. .+.|... +|-.+..
T Consensus 600 l~l~GD~~~tt~lev~~~p~~v~~v~wNG~~~~~~~~~~g~~~~~~~~~~~~i~lP~L~~l~Wk~~dslPE~~~~ydDs~ 679 (1003)
T 3og2_A 600 LSVQADFNVTTPLEIIGIPKGISKLAVNGKELGYSVSELGDWIAHPAIEIPHVQVPELTKLKWYKVDSLPEIRSNYDDSR 679 (1003)
T ss_dssp EEEEEEBSSCCCEEEESCCTTCCEEEETTEEECCEECTTSCEEECCCCCCCCCCCCCGGGSCCEEEESCGGGSTTCCCTT
T ss_pred EEEEeecCCCceEEEEecCCCccEEEECCEEceeEecCCCcEEEEecCCCCcccCCCCCCCCeeecCCCcccCCCCCccc
Confidence 0 0000 00 1124321 1211100
Q ss_pred ----cCC------Cccccc--cchhhcCCCCCCccEEEEEEEeecCCCcccccCCCCceeeeCC-cceEEEEEECCEEEE
Q 006468 243 ----GES------STLTAI--GLLEQINITRDTSDYLWYMTSVEISSSESFLRGGQKPTLTVES-AGHAVHVFINGQFLG 309 (644)
Q Consensus 243 ----~~~------~~~~~~--~~~Eql~~t~d~~Gyl~Y~t~i~~~~~~~~~~~g~~~~L~v~~-~~D~a~Vfvng~~vG 309 (644)
+.. .|...| .-..+.|. ++|.+|||.+|+.+..+. ...|.+++ .+..+.|||||+|+|
T Consensus 680 W~~A~~~~t~n~~~p~~~p~~Lya~dYGf---h~G~~wYRG~F~a~~~~~------~v~L~~~GG~af~~sVWLNG~flG 750 (1003)
T 3og2_A 680 WPLANLRTSNNTYAPLKTPVSLYGSDYGF---HAGTLLFRGRFTARTARQ------QLFLSTQGGSAFASSVWLNDRFIG 750 (1003)
T ss_dssp SCBCCCSCCCCSSSCCCSSSCCBGGGGTC---CSSCEEEEEEEECSSSSE------EEEEEEECSTTCCEEEEETTEEEE
T ss_pred ceecCcccccCcccCCCCCcEeEccccCc---ccCCEEEeeEEECCCCce------EEEEEEccccccccEEEECCEEec
Confidence 000 011111 22344555 678999999998875431 24566665 677999999999999
Q ss_pred EEEccccC--cceEEeecccccCC-CCeEEEEEEecCcc-ccccC--CCccccceeecEEEccccCCCccCccCCceEec
Q 006468 310 SAFGTREN--RRFTFSGPANLRAG-INKIALLSIAVGLP-NVGLH--YETWETGVRGAVVLHGLDHGNKDLTWQKWSYQV 383 (644)
Q Consensus 310 ~~~~~~~~--~~~~~~~~~~l~~g-~~~L~ILven~Gr~-N~G~~--~~~~~KGI~G~V~l~g~~~~~~~L~~~~W~~~~ 383 (644)
+..+.... .++++++| .|+.| +|+|.|+|+|||+. ++... -.+.++||++ ..|.|.....++ ..||++.
T Consensus 751 s~~g~g~~~~~~~~~~lP-~L~~g~~NVLtV~vDn~G~d~~w~~G~d~~k~PRGi~~-~~l~g~~~~~~~---~~Wki~G 825 (1003)
T 3og2_A 751 SFTGFDAASAANSSYTLD-RLVRGRRYILTVVVDSTGLDENWTTGDDSMKAPRGILD-YALTSSSGANVS---ISWKLTG 825 (1003)
T ss_dssp EECCCTTCSEEEEEEEEC-SCCTTCEEEEEEEECCCCCCCCCSBTCCGGGCCCEEEE-EEEEETTSCBCC---CEEEEES
T ss_pred cccCCCcccccceEEECC-cccCCCceEEEEEEeCCCcccccccCcccccCCCccee-eeccCCCCCccc---ceEEEec
Confidence 98854321 24556655 36655 79999999999986 32221 1278999997 777664211011 2598874
Q ss_pred c------------------CccccccccCCCCCCCCcccCC--------Cccc-cccCCceEEEEEEeC--C-CCCC-ce
Q 006468 384 G------------------LKGEAMNLVSPSEATSVDWTRG--------SLAA-QGQQSLKWYKAYFDA--P-TGNE-PL 432 (644)
Q Consensus 384 ~------------------l~ge~~~~~~~~~~~~~~W~~~--------~~~~-~~~~~~~~Yr~~F~~--p-~~~d-~~ 432 (644)
. |.+||.++|+|. ++..+|.+. ++.. ....+.+|||++|++ | ++.| |+
T Consensus 826 n~GGe~~~D~vRGplNeGGly~ER~GwHLPg-~~~~~W~~~~~~~~~~~sp~~g~~~~Gv~fyrt~f~LdlP~~g~Dvpl 904 (1003)
T 3og2_A 826 NLGGEDYRDVFRGPLNEGGLFFERQGFHLPS-PPLSDFTHGPSSSSSSSSPLDGIAHAGIAFYAAKLPLHLPAQEYDIPL 904 (1003)
T ss_dssp STTTTSCSCTTTCSSSCCSSHHHHHTTTSSS-CCGGGSBCCCTTSTTCCCTTTCBSSSEEEEEEEEEEEECCTTTEECCE
T ss_pred ccCCcccCCcccccccCCceeEEeccccCCC-CCccccccccccccccCCcccCCCCCceEEEEEEeecCCCcccCceeE
Confidence 4 556889999994 667789875 2211 124588999999887 6 5555 66
Q ss_pred EEEeCC-----CceEEEEECCeeeeeeeeccccCCCCCCccCCCcCCccccCCCCCCceeeeecCccccc-CCcceEEE-
Q 006468 433 ALDLRS-----MGKGQVWINGQSIGRYWMAYAKGDCKTCSYAGTFRPINCQRRCGHPTQRWYHVPRSWLK-PTKNLLVV- 505 (644)
Q Consensus 433 ~Ld~~g-----~gKG~vwVNG~nlGRYW~~~~~g~~~~~~~~G~~~~~~~~~~~~~PQqtlY~VP~~~Lk-~g~N~ivv- 505 (644)
.|.+.. -.|.++||||+++|||-+. +| ||.++. ||..+|+ +|+|+|.|
T Consensus 905 ~~~f~~~~~~~~yRa~lfVNG~q~Gkyv~~-----------iG-------------PQt~Fp-vP~GILn~~G~Ntiala 959 (1003)
T 3og2_A 905 SFVFDNATAAAPYRALLYVNGFQYGKYVSN-----------IG-------------PQTEFP-VPEGILDYNGDNWIGVA 959 (1003)
T ss_dssp EEEECCCSSCCCEEEEEEETTEEEEEEETT-----------TC-------------CCCEEE-ECBTTBCTEEEEEEEEE
T ss_pred EEEECCCCCCcceEEEEEEeceeeeeecCC-----------CC-------------Ccceec-CCcccccCCCcceEEEE
Confidence 666643 3588999999999999864 67 998877 9999998 79999998
Q ss_pred ---EEecCCCCcceEEEee
Q 006468 506 ---FEELGGDASRISLVKR 521 (644)
Q Consensus 506 ---fE~~g~~~~~i~l~~~ 521 (644)
+|+.|+.+..++|+..
T Consensus 960 lWa~~~~ga~~~~~~L~~~ 978 (1003)
T 3og2_A 960 LWALESRGAKVPGLALKSK 978 (1003)
T ss_dssp EEECSTTCBCCSCEEEEEC
T ss_pred EEeccCCCCCCCceEEEEc
Confidence 4667778888888643
No 6
>2jx9_A Latrophilin 1; lectin, beta-sandwich, disulphide, glycosylated, G-protein C receptor, membrane, receptor, transducer, transmembrane, CE adhesion; HET: NAG; NMR {Mus musculus} PDB: 2jxa_A*
Probab=99.90 E-value=1.7e-24 Score=193.08 Aligned_cols=88 Identities=26% Similarity=0.597 Sum_probs=82.0
Q ss_pred cCCCCceeeecCCCCeEeeeeeeccCCC-CCCCCC--C--CCCCccCCChHHHHHHHcCCCCceEEEecCCCccCCCCCC
Q 006468 550 STGNAKVLLQCAPGQSITSIEFASFGTP-SGTCGS--F--QKGTCHAPNSHAMLEKECIGQESCSIFISSGVFGTDPCPN 624 (644)
Q Consensus 550 ~ce~~~~~L~C~~g~~Is~I~~A~YGr~-~~~C~~--~--~~~~C~~~~s~~~V~~~C~Gk~~C~v~a~~~~Fg~DPC~g 624 (644)
+||+++++|+|+.+++| +|.+|+|||+ .++|+. + .+++|++++++++|+++|+||++|+|.+++.+|| |||||
T Consensus 12 ~CE~~~~~L~C~~~~~i-~I~~A~YGr~~~~~C~~~~~~~~~~~C~~~~s~~~V~~~C~Gk~~C~v~a~~~~Fg-DPCpg 89 (106)
T 2jx9_A 12 ACEGYPIELRCPGSDVI-MVENANYGRTDDKICDADPFQMENVQCYLPDAFKIMSQRCNNRTQCVVVAGSDAFP-DPCPG 89 (106)
T ss_dssp EETTSEEEEECSTTEEE-EEEEEEEEBSCSSSSCCCHHHHSCCCBCCTHHHHHHHHHHTTBSEEEEESSGGGSC-CSSTT
T ss_pred ecCCCCEEEEeCCCCEE-EEEeecCCCCCCCccCCCCCcccCCccCCccHHHHHHHHcCCCCceEEEccccccC-CCCCC
Confidence 59999999999987788 6999999999 699986 3 4689999999999999999999999999999999 99999
Q ss_pred CCceEEEEEEeeCCc
Q 006468 625 VLKRLSVQAVCSTAD 639 (644)
Q Consensus 625 ~~KYL~V~Y~C~p~~ 639 (644)
++|||+|+|+|+|..
T Consensus 90 t~KyL~V~y~C~~~~ 104 (106)
T 2jx9_A 90 TYKYLEVQYDCVPYK 104 (106)
T ss_dssp SCCEEEEEEEEEESS
T ss_pred ccEEEEEEEEeeccc
Confidence 999999999999864
No 7
>2zx2_A CSL3; lectin, rhamnose, innate immunity, immune system, sugar binding protein; HET: RAM; 1.80A {Oncorhynchus keta} PDB: 2zx1_A 2zx0_A* 2zx3_A* 2zx4_A*
Probab=99.84 E-value=7.7e-22 Score=194.35 Aligned_cols=89 Identities=27% Similarity=0.540 Sum_probs=82.5
Q ss_pred cCCCCceeeecCCCCeEeeeeeeccCCC-CCCCCC----C--CCCCccCCChHHHHHHHcCCCCceEEEecCCCccCCCC
Q 006468 550 STGNAKVLLQCAPGQSITSIEFASFGTP-SGTCGS----F--QKGTCHAPNSHAMLEKECIGQESCSIFISSGVFGTDPC 622 (644)
Q Consensus 550 ~ce~~~~~L~C~~g~~Is~I~~A~YGr~-~~~C~~----~--~~~~C~~~~s~~~V~~~C~Gk~~C~v~a~~~~Fg~DPC 622 (644)
+||+++++|+||.| +| .|.+|+|||. .++|+. + .+++|++++++++|+++|+||++|+|.+++.+|| |||
T Consensus 5 ~Ce~~~~~L~C~~g-~I-~I~~A~yGR~~~~~C~~~~p~~~~~~~~C~~~~s~~~v~~~C~Gk~~C~v~a~~~~Fg-DPC 81 (195)
T 2zx2_A 5 TCEGSDALLQCDGA-KI-HIKRANYGRRQHDVCSIGRPDNQLTDTNCLSQSSTSKMAERCGGKSECIVPASNFVFG-DPC 81 (195)
T ss_dssp EETTSEEEEECTTS-EE-EEEEEEEEBSCSSTTCTTCCGGGSCCCCBCCTTHHHHHHHHHTTCSEEEEECSHHHHC-CSS
T ss_pred EccCCCEEEEcCCC-EE-EEEEecCCCCCCCcCCCCCCCccccCCccCCCchhHHHHHhCCCCCceeEEcCccccC-CCC
Confidence 49999999999999 99 6999999987 589975 2 5789999999999999999999999999999999 999
Q ss_pred CCCCceEEEEEEeeCCcCC
Q 006468 623 PNVLKRLSVQAVCSTADAN 641 (644)
Q Consensus 623 ~g~~KYL~V~Y~C~p~~~~ 641 (644)
||++|||+|+|.|+|....
T Consensus 82 ~g~~KyL~V~y~C~~~~~~ 100 (195)
T 2zx2_A 82 VGTYKYLDTKYSCVQQQET 100 (195)
T ss_dssp TTSCCEEEEEEEEECSSCC
T ss_pred CCceeeeeeeeeecccccc
Confidence 9999999999999997654
No 8
>2zx2_A CSL3; lectin, rhamnose, innate immunity, immune system, sugar binding protein; HET: RAM; 1.80A {Oncorhynchus keta} PDB: 2zx1_A 2zx0_A* 2zx3_A* 2zx4_A*
Probab=99.83 E-value=3.7e-21 Score=189.53 Aligned_cols=84 Identities=27% Similarity=0.632 Sum_probs=79.3
Q ss_pred cCCCCceeeecCCCCeEeeeeeeccCCC-CCCCC------CCCCCCccCCChHHHHHHHcCCCCceEEEecCCCccCCCC
Q 006468 550 STGNAKVLLQCAPGQSITSIEFASFGTP-SGTCG------SFQKGTCHAPNSHAMLEKECIGQESCSIFISSGVFGTDPC 622 (644)
Q Consensus 550 ~ce~~~~~L~C~~g~~Is~I~~A~YGr~-~~~C~------~~~~~~C~~~~s~~~V~~~C~Gk~~C~v~a~~~~Fg~DPC 622 (644)
+||+++++|+|+.| +| +|.+|+|||+ .++|+ .+.+++|++++++++|+++|+||++|+|.+++.+|| |||
T Consensus 105 ~CE~~~~~L~C~~g-~I-~I~~A~yGr~~~~~C~~~~p~~~~~~~~C~~~~s~~~v~~~C~Gk~~C~v~a~~~~FG-DPC 181 (195)
T 2zx2_A 105 ICEGSDSQLLCDRG-EI-RIQRANYGRRQHDVCSIGRPHQQLKNTNCLSQSTTSKMAERCDGKRQCIVKVSNSVFG-DPC 181 (195)
T ss_dssp EETTSEEEEECSSS-CE-EEEEEEEEBSCSSTTCTTCCGGGTCCCCBCCTTHHHHHHHHHTTCSEEEEECSHHHHC-CSS
T ss_pred cccccceeeeEcCC-EE-EEEeecCCCCCCCccCCCCCCCCccCCccCCccHHHHHHHHCCCCCCcEEEcCcccCC-CCC
Confidence 49999999999999 99 7999999996 68997 346899999999999999999999999999999999 999
Q ss_pred CCCCceEEEEEEee
Q 006468 623 PNVLKRLSVQAVCS 636 (644)
Q Consensus 623 ~g~~KYL~V~Y~C~ 636 (644)
||++|||+|+|.|+
T Consensus 182 ~gt~KyL~V~y~Cv 195 (195)
T 2zx2_A 182 VGTYKYLDVAYTCD 195 (195)
T ss_dssp TTSCCEEEEEEEEC
T ss_pred CCCCeEEEEEEEEC
Confidence 99999999999995
No 9
>3fn9_A Putative beta-galactosidase; structural genomics, glycosidas hydrolase, PSI-2, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=97.21 E-value=0.0013 Score=75.92 Aligned_cols=99 Identities=20% Similarity=0.197 Sum_probs=71.7
Q ss_pred CccEEEEEEEeecCCCcccccCCCCceeeeCCcceEEEEEECCEEEEEEEccccCcceEEeecccccCC-CCeEEEEEEe
Q 006468 263 TSDYLWYMTSVEISSSESFLRGGQKPTLTVESAGHAVHVFINGQFLGSAFGTRENRRFTFSGPANLRAG-INKIALLSIA 341 (644)
Q Consensus 263 ~~Gyl~Y~t~i~~~~~~~~~~~g~~~~L~v~~~~D~a~Vfvng~~vG~~~~~~~~~~~~~~~~~~l~~g-~~~L~ILven 341 (644)
..|..|||++|.++... .+....|.+.++...+.|||||++||...+.. ..+.++++-.|+.| .|+|.|.|.|
T Consensus 58 ~~g~~wYr~~f~~p~~~----~~~~~~L~f~gv~~~a~V~vNG~~vg~~~~g~--~~f~~dIt~~l~~G~~N~l~V~v~~ 131 (692)
T 3fn9_A 58 YEGAGYYRKTQFFPHDL----EGKRVFLRFEGVGACAEVYVNGKLAGTHKGGY--SAFACEIGTALKLGAENEIIVKADN 131 (692)
T ss_dssp CCSEEEEEEEEEECGGG----TTCEEEEEESCCBSEEEEEETTEEEEEEECTT--SCEEEECGGGCCTTEEEEEEEEEEC
T ss_pred cceEEEEEEEEEECchh----CCCeEEEEECCccEeeEEEECCEEeeeEcCCc--ceEEEEChHhcCCCCceEEEEEEEC
Confidence 57899999999876431 13346789999999999999999999987543 34566655457778 8999999998
Q ss_pred cCccccccCC---CccccceeecEEEccc
Q 006468 342 VGLPNVGLHY---ETWETGVRGAVVLHGL 367 (644)
Q Consensus 342 ~Gr~N~G~~~---~~~~KGI~G~V~l~g~ 367 (644)
.-...+-+.- -....||..+|.|...
T Consensus 132 ~~~~~~~p~~~d~~~~~~GI~R~V~L~~~ 160 (692)
T 3fn9_A 132 KARPDVIPVNQNLFGVYGGIYRPVWLIVT 160 (692)
T ss_dssp CCCTTSSSCSSSSSCCCCBCCSCEEEEEE
T ss_pred CCCCCcCCCCCcccccCCCcceeEEEEEE
Confidence 7654432200 0124699999999554
No 10
>3lpf_A Beta-glucuronidase; alpha/beta barrel, sugar-binding domain, beta-sandwich domai glycosyl hydrolase, glycosida hydrolase; HET: Z77; 2.26A {Escherichia coli} PDB: 3k46_A* 3k4d_A* 3lpg_A* 3k4a_A
Probab=97.12 E-value=0.0017 Score=73.83 Aligned_cols=98 Identities=19% Similarity=0.177 Sum_probs=69.4
Q ss_pred CccEEEEEEEeecCCCcccccCCCCceeeeCCcceEEEEEECCEEEEEEEccccCcceEEeecccccCCCC-eEEEEEEe
Q 006468 263 TSDYLWYMTSVEISSSESFLRGGQKPTLTVESAGHAVHVFINGQFLGSAFGTRENRRFTFSGPANLRAGIN-KIALLSIA 341 (644)
Q Consensus 263 ~~Gyl~Y~t~i~~~~~~~~~~~g~~~~L~v~~~~D~a~Vfvng~~vG~~~~~~~~~~~~~~~~~~l~~g~~-~L~ILven 341 (644)
..|.+|||++|.++... .+....|.+.++...+.|||||++||...+.. ..+.++++-.|+.|.| +|.|.|.|
T Consensus 65 ~~G~~wY~~~f~~p~~~----~~~~~~L~f~gv~~~a~V~vNG~~vg~~~~~~--~p~~~dit~~l~~G~nn~l~V~v~n 138 (605)
T 3lpf_A 65 YAGNVWYQREVFIPKGW----AGQRIVLRFDAVTHYGKVWVNNQEVMEHQGGY--TPFEADVTPYVIAGKSVRITVCVNN 138 (605)
T ss_dssp CCSEEEEEEEEECCTTC----SSCEEEEEESCCBSEEEEEESSCEEEEECCSS--SCEEEECGGGCCTTSEEEEEEEEEC
T ss_pred cceEEEEEEEEECCccc----CCCEEEEEECCcceEEEEEECCEEEEEEcCCC--CcceeechhhccCCCeEEEEEEEec
Confidence 67999999999876431 13345789999999999999999999876533 3456665545777875 89999987
Q ss_pred cCccc------------------cccCCCccccceeecEEEccc
Q 006468 342 VGLPN------------------VGLHYETWETGVRGAVVLHGL 367 (644)
Q Consensus 342 ~Gr~N------------------~G~~~~~~~KGI~G~V~l~g~ 367 (644)
.-+.. |...+ -...||..+|.|...
T Consensus 139 ~~~~~~~P~g~~~~~~~g~~k~~~~~d~-~~~~GI~R~V~L~~~ 181 (605)
T 3lpf_A 139 ELNWQTIPPGMVITDENGKKKQSYFHDF-FNYAGIHRSVMLYTT 181 (605)
T ss_dssp CCCTTSSSCEEEEECTTSCEEEEESSSB-CCCCBCCSCEEEEEE
T ss_pred CCCcccCCCccccccccCcccccccccc-cccCcccceEEEEEE
Confidence 53211 11111 246899999999554
No 11
>3gm8_A Glycoside hydrolase family 2, candidate beta-GLYC; structural genomics, glycosidase, PSI-2, protein initiative; 2.40A {Bacteroides vulgatus}
Probab=97.09 E-value=0.0017 Score=76.30 Aligned_cols=96 Identities=23% Similarity=0.266 Sum_probs=70.6
Q ss_pred ccEEEEEEEeecCCCcccccCCCCceeeeCCcceEEEEEECCEEEEEEEccccCcceEEeecccccCCCCeEEEEEEecC
Q 006468 264 SDYLWYMTSVEISSSESFLRGGQKPTLTVESAGHAVHVFINGQFLGSAFGTRENRRFTFSGPANLRAGINKIALLSIAVG 343 (644)
Q Consensus 264 ~Gyl~Y~t~i~~~~~~~~~~~g~~~~L~v~~~~D~a~Vfvng~~vG~~~~~~~~~~~~~~~~~~l~~g~~~L~ILven~G 343 (644)
.|..|||++|.++... .+....|.+.++...+.|||||++||...+.. ..+.++++-.|+.|.|+|.|.|.|.-
T Consensus 65 ~g~~wYrk~f~vp~~~----~~~~v~L~f~gv~~~a~V~vNG~~vG~~~~g~--~pf~~DIT~~Lk~G~N~L~V~V~n~~ 138 (801)
T 3gm8_A 65 AGISWYRKTFTIPSKW----KNKKVQILFEGVYLNSEVWINGHWLGKRPNGY--ISFVYDLTPYLQEGKNQIAVKVDHSK 138 (801)
T ss_dssp CEEEEEEEEEECCSGG----GSCEEEEEESCCBSCEEEEETTEEEEEECCSS--CCEEEECGGGCCSSEEEEEEEEEECS
T ss_pred CceEEEEEEEEcCccc----CCCEEEEEECccceEEEEEECCEEeecccCCc--ccEEEECcHhccCCCcEEEEEEECCC
Confidence 6899999999876432 13346789999999999999999999986533 34566655457788899999999864
Q ss_pred ccccccCCCccccceeecEEEcccc
Q 006468 344 LPNVGLHYETWETGVRGAVVLHGLD 368 (644)
Q Consensus 344 r~N~G~~~~~~~KGI~G~V~l~g~~ 368 (644)
..+. ..+ ...||..+|.|...+
T Consensus 139 ~~~~-~w~--~~~GI~R~V~L~~~~ 160 (801)
T 3gm8_A 139 ALTG-RWY--TGSGIYRPVYLLVSN 160 (801)
T ss_dssp CCCC-SSC--CCCBCCSCEEEEEEC
T ss_pred CCCC-ccc--cCCCeeeEEEEEEEC
Confidence 3332 122 248999999996543
No 12
>3hn3_A Beta-G1, beta-glucuronidase; lysosomal enzyme, acid hydrolase, glycosidase, disease mutat glycoprotein, hydrolase, lysosome, mucopolysaccharidosis; HET: NDG NAG BMA MAN GUP; 1.70A {Homo sapiens} PDB: 1bhg_A*
Probab=97.00 E-value=0.0016 Score=74.16 Aligned_cols=76 Identities=17% Similarity=0.177 Sum_probs=55.6
Q ss_pred CccEEEEEEEeecCCCcccc-cCCCCceeeeCCcceEEEEEECCEEEEEEEccccCcceEEeecccccCCC----CeEEE
Q 006468 263 TSDYLWYMTSVEISSSESFL-RGGQKPTLTVESAGHAVHVFINGQFLGSAFGTRENRRFTFSGPANLRAGI----NKIAL 337 (644)
Q Consensus 263 ~~Gyl~Y~t~i~~~~~~~~~-~~g~~~~L~v~~~~D~a~Vfvng~~vG~~~~~~~~~~~~~~~~~~l~~g~----~~L~I 337 (644)
..|++|||++|.++.. +. ..+....|.+.++...+.|||||++||...+.. ..+.++++-.|+.|. |+|.|
T Consensus 75 ~~G~~wYr~~f~~p~~--~~~~~~~~~~L~f~gv~~~a~V~vNG~~vg~~~~g~--~~~~~dit~~l~~g~~~~~n~l~V 150 (613)
T 3hn3_A 75 FVGWVWYEREVILPER--WTQDLRTRVVLRIGSAHSYAIVWVNGVDTLEHEGGY--LPFEADISNLVQVGPLPSRLRITI 150 (613)
T ss_dssp CCSEEEEEEEECCCHH--HHHCTTEEEEEEESCCCSEEEEEETTEEEEEEESSS--SCEEEECHHHHCCC---CCEEEEE
T ss_pred CceeEEEEEEEEeCch--hhhcCCCEEEEEECCcceEEEEEECCEEEeEEcCCc--ceEEEEChhhhcCCCCCcceEEEE
Confidence 6799999999987632 11 112335789999999999999999999987543 345565543467774 89999
Q ss_pred EEEec
Q 006468 338 LSIAV 342 (644)
Q Consensus 338 Lven~ 342 (644)
.|.|.
T Consensus 151 ~v~n~ 155 (613)
T 3hn3_A 151 AINNT 155 (613)
T ss_dssp EEECC
T ss_pred EEeCC
Confidence 99874
No 13
>3cmg_A Putative beta-galactosidase; structural genomics, PSI-2, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides fragilis}
Probab=96.92 E-value=0.0037 Score=71.92 Aligned_cols=98 Identities=17% Similarity=0.185 Sum_probs=69.1
Q ss_pred CccEEEEEEEeecCCCcccccCCCCceeeeCCcceEEEEEECCEEEEEEEccccCcceEEeecccccCC-CCeEEEEEEe
Q 006468 263 TSDYLWYMTSVEISSSESFLRGGQKPTLTVESAGHAVHVFINGQFLGSAFGTRENRRFTFSGPANLRAG-INKIALLSIA 341 (644)
Q Consensus 263 ~~Gyl~Y~t~i~~~~~~~~~~~g~~~~L~v~~~~D~a~Vfvng~~vG~~~~~~~~~~~~~~~~~~l~~g-~~~L~ILven 341 (644)
..|..|||++|.++... .+....|.+.++...+.|||||++||...+.. ..+.++++-.|+.| .|+|.|.|.|
T Consensus 47 ~~g~~wYr~~f~~p~~~----~~~~~~L~f~gv~~~a~V~vNG~~vg~~~~~~--~~~~~dit~~l~~G~~N~l~V~v~~ 120 (667)
T 3cmg_A 47 KRGIGNYEKALYIRPEW----KGKRLFLRFDGVNSIADVFINRKHIGEHRGGY--GAFIFEITDLVKYGEKNSVLVRANN 120 (667)
T ss_dssp CCSEEEEEEEEECCGGG----TTSEEEEEESCCBSEEEEEETTEEEEEEECSS--SCEEEECTTTSCTTSEEEEEEEEEC
T ss_pred cceeEEEEEEEECCccc----CCCEEEEEECCccceeEEEECCEEEeeecCCc--ccEEEECCHHHCCCCCcEEEEEEec
Confidence 56899999999876421 13346789999999999999999999986533 34556654346777 7999999988
Q ss_pred cCcccccc---CCCccccceeecEEEccc
Q 006468 342 VGLPNVGL---HYETWETGVRGAVVLHGL 367 (644)
Q Consensus 342 ~Gr~N~G~---~~~~~~KGI~G~V~l~g~ 367 (644)
.-..+.-+ .+ ....||..+|.|...
T Consensus 121 ~~~~~~~p~~~d~-~~~~GI~R~V~L~~~ 148 (667)
T 3cmg_A 121 GEQLDIMPLVGDF-NFYGGIYRDVHLLIT 148 (667)
T ss_dssp CCCSSSSCSSCSS-CCCCBCCSCEEEEEE
T ss_pred CCCcccCCccCcc-cccCccCceEEEEEE
Confidence 53322111 11 235799999988544
No 14
>3bga_A Beta-galactosidase; NYSGXRC, protein structure initiative II (PSI-II), glycosyl hydrolase family 2, jelly-roll fold; 2.10A {Bacteroides thetaiotaomicron vpi-5482} PDB: 3dec_A
Probab=96.73 E-value=0.005 Score=73.97 Aligned_cols=95 Identities=21% Similarity=0.239 Sum_probs=67.7
Q ss_pred ccEEEEEEEeecCCCcccccCCCCceeeeCCcceEEEEEECCEEEEEEEccccCcceEEeecccccCCCCeEEEEEEecC
Q 006468 264 SDYLWYMTSVEISSSESFLRGGQKPTLTVESAGHAVHVFINGQFLGSAFGTRENRRFTFSGPANLRAGINKIALLSIAVG 343 (644)
Q Consensus 264 ~Gyl~Y~t~i~~~~~~~~~~~g~~~~L~v~~~~D~a~Vfvng~~vG~~~~~~~~~~~~~~~~~~l~~g~~~L~ILven~G 343 (644)
.+..|||++|.++... .+....|.+.++...+.|||||++||...+.. ..+.++++-.|+.|.|+|.|.|.+.-
T Consensus 125 ~~~~~Yrr~F~vp~~~----~g~~v~L~F~gv~~~a~V~vNG~~vG~~~gg~--~p~~~DIT~~L~~G~N~L~V~V~~~~ 198 (1010)
T 3bga_A 125 NEVGSYRRTFKVPADW----KGRRVVLCCEGVISFYYVWVNGKLLGYNQGSK--TAAEWDITDVLSEGENVVALEVYRWS 198 (1010)
T ss_dssp CEEEEEEEEEECCGGG----TTSEEEEEESCEESEEEEEETTEEEEEEECSS--SCEEEECGGGCCSSEEEEEEEEESCC
T ss_pred CcEEEEEEEeEeCccc----CCCEEEEEECCCCceeEEEECCEEEeeEeCCC--CcceeehhhhccCCCcEEEEEEEecC
Confidence 6789999999876431 13346799999999999999999999886533 34556655457788999999987532
Q ss_pred ccccccCCC----ccccceeecEEEccc
Q 006468 344 LPNVGLHYE----TWETGVRGAVVLHGL 367 (644)
Q Consensus 344 r~N~G~~~~----~~~KGI~G~V~l~g~ 367 (644)
.|..++ -...||..+|.|...
T Consensus 199 ---d~s~~e~~d~w~~sGI~R~V~L~~~ 223 (1010)
T 3bga_A 199 ---SGAYLECQDMWRLSGIERDVYLYST 223 (1010)
T ss_dssp ---GGGGGBCCSEEECCEECSCEEEEEE
T ss_pred ---CCcccccCCccccCCcceEEEEEEe
Confidence 122222 124799999998544
No 15
>1yq2_A Beta-galactosidase; glycosyl hydrolase family 2, TIM barrel, hexamer; 1.90A {Arthrobacter SP} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3
Probab=96.41 E-value=0.0064 Score=73.15 Aligned_cols=98 Identities=20% Similarity=0.273 Sum_probs=67.9
Q ss_pred ccEEEEEEEeecCCCcccccCC-CCceeeeCCcceEEEEEECCEEEEEEEccccCcceEEeecccccCCCCeEEEEEEec
Q 006468 264 SDYLWYMTSVEISSSESFLRGG-QKPTLTVESAGHAVHVFINGQFLGSAFGTRENRRFTFSGPANLRAGINKIALLSIAV 342 (644)
Q Consensus 264 ~Gyl~Y~t~i~~~~~~~~~~~g-~~~~L~v~~~~D~a~Vfvng~~vG~~~~~~~~~~~~~~~~~~l~~g~~~L~ILven~ 342 (644)
.+..|||++|.++.. ++..+ ....|.+.++...+.|||||++||...+.. ..+.++++-.|+.|+|+|.|.|.+.
T Consensus 117 ~~~~wYrr~F~vp~~--~~~~g~~rv~L~F~gv~~~a~V~vNG~~VG~~~gg~--~p~~~DIT~~Lk~G~N~L~V~V~~~ 192 (1024)
T 1yq2_A 117 NPTGDFRRRFDVPAQ--WFESTTAALTLRFDGVESRYKVWVNGQEIGVGSGSR--LAQEFDVSDALRAGSNLLVVRVHQW 192 (1024)
T ss_dssp CCEEEEEEEEEECGG--GGSTTEEEEEEEESCEESCEEEEETTEEEEEECCTT--SCEEEECTTTCCSEEEEEEEEEESS
T ss_pred CceEEEEEEeEECch--HhcCCCceEEEEECCCCceEEEEECCEEEEEEeCCc--cceEEecHHhccCCCcEEEEEEEec
Confidence 578899999987632 11123 346799999999999999999999876432 3455665544778899999998742
Q ss_pred CccccccCCC----ccccceeecEEEcccc
Q 006468 343 GLPNVGLHYE----TWETGVRGAVVLHGLD 368 (644)
Q Consensus 343 Gr~N~G~~~~----~~~KGI~G~V~l~g~~ 368 (644)
- .|..++ -...||..+|.|...+
T Consensus 193 ~---d~~~~e~~d~w~~~GI~R~V~L~~~p 219 (1024)
T 1yq2_A 193 S---AASYLEDQDQWWLPGIFRDVTLQARP 219 (1024)
T ss_dssp C---GGGGGBCCSEEECCEECSCEEEEEEE
T ss_pred C---CCCccccCCccccCCcceEEEEEEcC
Confidence 2 122221 1247999999996543
No 16
>1jz7_A Lactase, beta-galactosidase, LACZ; TIM barrel (alpha/beta barrel), jelly-roll barrel, immunoglobulin, beta supersandwich, hydrolase; HET: GAL; 1.50A {Escherichia coli} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 PDB: 1hn1_A 1jyx_A* 1jz3_A* 1jz4_A* 1jz5_A* 1jz6_A* 1dp0_A* 3iap_A* 1jz8_A* 1jyn_A* 1jyv_A* 1jyw_A* 3iaq_A* 1px3_A 1px4_A* 3czj_A* 3i3e_A 3i3d_A* 3i3b_A 3dym_A ...
Probab=96.18 E-value=0.0098 Score=71.54 Aligned_cols=96 Identities=22% Similarity=0.298 Sum_probs=66.5
Q ss_pred ccEEEEEEEeecCCCcccccCCCCceeeeCCcceEEEEEECCEEEEEEEccccCcceEEeecccccCCCCeEEEEEEecC
Q 006468 264 SDYLWYMTSVEISSSESFLRGGQKPTLTVESAGHAVHVFINGQFLGSAFGTRENRRFTFSGPANLRAGINKIALLSIAVG 343 (644)
Q Consensus 264 ~Gyl~Y~t~i~~~~~~~~~~~g~~~~L~v~~~~D~a~Vfvng~~vG~~~~~~~~~~~~~~~~~~l~~g~~~L~ILven~G 343 (644)
.|..|||++|.++.. + +.+....|.+.++...+.|||||++||...+.. ..+.+++.-.|+.|.|+|.|.|.+.-
T Consensus 118 ~~~g~Yrr~F~vp~~--~-~~~~~v~L~F~gv~~~a~V~vNG~~vG~~~gg~--~p~~~DIT~~L~~G~N~L~V~V~~~~ 192 (1023)
T 1jz7_A 118 NPTGCYSLTFNVDES--W-LQEGQTRIIFDGVNSAFHLWCNGRWVGYGQDSR--LPSEFDLSAFLRAGENRLAVMVLRWS 192 (1023)
T ss_dssp CCEEEEEEEEEECHH--H-HHSSEEEEEESCEESEEEEEETTEEEEEEECTT--SCEEEECTTTCCSEEEEEEEEEESCC
T ss_pred CcEEEEEEEEEeCch--h-cCCCEEEEEECCCCcceEEEECCEEEccccCCC--CceEEecHhhccCCCcEEEEEEEecC
Confidence 578899999987632 1 002235789999999999999999999886533 34556654346778899999887422
Q ss_pred ccccccCCCc----cccceeecEEEccc
Q 006468 344 LPNVGLHYET----WETGVRGAVVLHGL 367 (644)
Q Consensus 344 r~N~G~~~~~----~~KGI~G~V~l~g~ 367 (644)
.|..++. ...||..+|.|...
T Consensus 193 ---d~s~~e~qd~w~~sGI~R~V~L~~~ 217 (1023)
T 1jz7_A 193 ---DGSYLEDQDMWRMSGIFRDVSLLHK 217 (1023)
T ss_dssp ---GGGGGBCCSEEECCEECSCEEEEEE
T ss_pred ---CCCccccCCccccCCcCceEEEEEc
Confidence 2222221 34799999998544
No 17
>2vzs_A CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, glucosamine, glycoside hydrolase; HET: GCS; 1.85A {Amycolatopsis orientalis} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2x05_A* 2x09_A* 2vzo_A 2vzt_A* 2vzv_A* 2vzu_A*
Probab=96.17 E-value=0.007 Score=73.01 Aligned_cols=98 Identities=15% Similarity=0.218 Sum_probs=65.8
Q ss_pred ccEEEEEEEeecCCCcccccCCCCceeeeCCcceEEEEEECCEEEEEEE-ccccCcceEEeecccccCCCCeEEEEEEec
Q 006468 264 SDYLWYMTSVEISSSESFLRGGQKPTLTVESAGHAVHVFINGQFLGSAF-GTRENRRFTFSGPANLRAGINKIALLSIAV 342 (644)
Q Consensus 264 ~Gyl~Y~t~i~~~~~~~~~~~g~~~~L~v~~~~D~a~Vfvng~~vG~~~-~~~~~~~~~~~~~~~l~~g~~~L~ILven~ 342 (644)
.|..|||++|.+ ... +....|.+.++...+.|||||++||... .......+.+++.-.|+.|.|+|.|.|.+.
T Consensus 118 ~~~~wYrr~f~v-~~~-----~~~v~L~F~gvd~~a~V~vNG~~vg~~~~h~g~~~~~~~DIt~~l~~G~N~L~V~v~~~ 191 (1032)
T 2vzs_A 118 SVPWWYRTDLNV-DDT-----SSRTYLDFSGVLSKADVWVNGTKVATKDQVNGAYTRHDLDITAQVHTGVNSVAFKVYPN 191 (1032)
T ss_dssp SSCEEEEEEEEE-SCC-----SSEEEEEECCEESBEEEEETTEEEECTTTSBSTTCCEEEECTTTCCSEEEEEEEEECCC
T ss_pred CccEEEEEEEEE-eCC-----CCEEEEEECCcccceEEEECCEEecccccccCcceeEEEECcHHhCCCCcEEEEEEeCC
Confidence 578999999987 211 2345789999999999999999998542 001123456665434677899999999886
Q ss_pred Cc---ccc-----ccCCCccccceeecEEEccc
Q 006468 343 GL---PNV-----GLHYETWETGVRGAVVLHGL 367 (644)
Q Consensus 343 Gr---~N~-----G~~~~~~~KGI~G~V~l~g~ 367 (644)
.. ..+ ++.......||..+|.|...
T Consensus 192 ~~~~~~~~g~~Dw~~~~~~~~sGI~r~V~L~~~ 224 (1032)
T 2vzs_A 192 DPNRDLSMGWIDWAQTPPDQNMGIVRDVLVRRS 224 (1032)
T ss_dssp CTTTSSSCCCTTTSCCCTTTTCEECSCEEEEEE
T ss_pred CCCccccCCccccccCcCCCCCCcceeeEEEEc
Confidence 43 112 22211124799999998543
No 18
>3oba_A Beta-galactosidase; TIM barrel, tetramer, GH2, glycosidase, hydrolase; 2.75A {Kluyveromyces lactis} PDB: 3ob8_A
Probab=96.15 E-value=0.0082 Score=72.20 Aligned_cols=100 Identities=19% Similarity=0.265 Sum_probs=68.1
Q ss_pred ccEEEEEEEeecCCCcccccCCCCceeeeCCcceEEEEEECCEEEEEEEccccCcceEEeecccccCCCCeEEEEEEecC
Q 006468 264 SDYLWYMTSVEISSSESFLRGGQKPTLTVESAGHAVHVFINGQFLGSAFGTRENRRFTFSGPANLRAGINKIALLSIAVG 343 (644)
Q Consensus 264 ~Gyl~Y~t~i~~~~~~~~~~~g~~~~L~v~~~~D~a~Vfvng~~vG~~~~~~~~~~~~~~~~~~l~~g~~~L~ILven~G 343 (644)
.|-.|||++|.++... + .+....|.+.++...+.|||||++||...+.. ..+.++++-.|+.|+|+|.|.|.+.-
T Consensus 111 n~~g~Yrr~f~vp~~~--~-~~~~v~L~F~gv~~~a~V~vNG~~vG~~~gg~--~p~~~DIT~~lk~G~N~L~V~V~~~s 185 (1032)
T 3oba_A 111 NPTGVYARTFELDSKS--I-ESFEHRLRFEGVDNCYELYVNGQYVGFNKGSR--NGAEFDIQKYVSEGENLVVVKVFKWS 185 (1032)
T ss_dssp CCEEEEEEEEEECHHH--H-HHEEEEEEESCEESEEEEEETTEEEEEEECTT--SCEEEECTTTCCSEEEEEEEEEESCC
T ss_pred CCeEEEEEEEEECchh--c-CCCEEEEEECCcceeEEEEECCEEEEEEeCCc--ccEEEEChhhccCCcEEEEEEEECCC
Confidence 5788999999876321 0 12235789999999999999999999987543 34556654346778899999997642
Q ss_pred ccccccCCC-ccccceeecEEEcccc
Q 006468 344 LPNVGLHYE-TWETGVRGAVVLHGLD 368 (644)
Q Consensus 344 r~N~G~~~~-~~~KGI~G~V~l~g~~ 368 (644)
.-.|-+.-. -..-||..+|.|...+
T Consensus 186 d~s~~edqd~w~~sGI~R~V~L~~~p 211 (1032)
T 3oba_A 186 DSTYIEDQDQWWLSGIYRDVSLLKLP 211 (1032)
T ss_dssp GGGGGBCCSEEECCEECSCEEEEEEE
T ss_pred CCCccCCCCcCccCccceEEEEEEEC
Confidence 212211000 1347999999996554
No 19
>3fn9_A Putative beta-galactosidase; structural genomics, glycosidas hydrolase, PSI-2, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=95.67 E-value=0.016 Score=66.92 Aligned_cols=66 Identities=20% Similarity=0.310 Sum_probs=50.6
Q ss_pred CCceEEEEEEeCCCCC--CceEEEeCCCc-eEEEEECCeeeeeeeeccccCCCCCCccCCCcCCccccCCCCCCceeeee
Q 006468 414 QSLKWYKAYFDAPTGN--EPLALDLRSMG-KGQVWINGQSIGRYWMAYAKGDCKTCSYAGTFRPINCQRRCGHPTQRWYH 490 (644)
Q Consensus 414 ~~~~~Yr~~F~~p~~~--d~~~Ld~~g~g-KG~vwVNG~nlGRYW~~~~~g~~~~~~~~G~~~~~~~~~~~~~PQqtlY~ 490 (644)
.+..|||.+|++|+.. ..++|.+.|.. ...|||||+-+|.-. |.| ...+ |-
T Consensus 59 ~g~~wYr~~f~~p~~~~~~~~~L~f~gv~~~a~V~vNG~~vg~~~--------------~g~-----------~~f~-~d 112 (692)
T 3fn9_A 59 EGAGYYRKTQFFPHDLEGKRVFLRFEGVGACAEVYVNGKLAGTHK--------------GGY-----------SAFA-CE 112 (692)
T ss_dssp CSEEEEEEEEEECGGGTTCEEEEEESCCBSEEEEEETTEEEEEEE--------------CTT-----------SCEE-EE
T ss_pred ceEEEEEEEEEECchhCCCeEEEEECCccEeeEEEECCEEeeeEc--------------CCc-----------ceEE-EE
Confidence 4679999999998642 35899999974 899999999999754 212 2333 44
Q ss_pred cCcccccCC-cceEEEE
Q 006468 491 VPRSWLKPT-KNLLVVF 506 (644)
Q Consensus 491 VP~~~Lk~g-~N~ivvf 506 (644)
|+ ++|+.| +|+|+|.
T Consensus 113 It-~~l~~G~~N~l~V~ 128 (692)
T 3fn9_A 113 IG-TALKLGAENEIIVK 128 (692)
T ss_dssp CG-GGCCTTEEEEEEEE
T ss_pred Ch-HhcCCCCceEEEEE
Confidence 77 789988 8999884
No 20
>3lpf_A Beta-glucuronidase; alpha/beta barrel, sugar-binding domain, beta-sandwich domai glycosyl hydrolase, glycosida hydrolase; HET: Z77; 2.26A {Escherichia coli} PDB: 3k46_A* 3k4d_A* 3lpg_A* 3k4a_A
Probab=95.52 E-value=0.028 Score=63.82 Aligned_cols=65 Identities=22% Similarity=0.423 Sum_probs=48.7
Q ss_pred CCceEEEEEEeCCCCC--CceEEEeCCC-ceEEEEECCeeeeeeeeccccCCCCCCccCCCcCCccccCCCCCCceeeee
Q 006468 414 QSLKWYKAYFDAPTGN--EPLALDLRSM-GKGQVWINGQSIGRYWMAYAKGDCKTCSYAGTFRPINCQRRCGHPTQRWYH 490 (644)
Q Consensus 414 ~~~~~Yr~~F~~p~~~--d~~~Ld~~g~-gKG~vwVNG~nlGRYW~~~~~g~~~~~~~~G~~~~~~~~~~~~~PQqtlY~ 490 (644)
.+..|||.+|++|+.. ..++|.+.|. ....|||||+.+|.-+ |.| ...+ |-
T Consensus 66 ~G~~wY~~~f~~p~~~~~~~~~L~f~gv~~~a~V~vNG~~vg~~~--------------~~~-----------~p~~-~d 119 (605)
T 3lpf_A 66 AGNVWYQREVFIPKGWAGQRIVLRFDAVTHYGKVWVNNQEVMEHQ--------------GGY-----------TPFE-AD 119 (605)
T ss_dssp CSEEEEEEEEECCTTCSSCEEEEEESCCBSEEEEEESSCEEEEEC--------------CSS-----------SCEE-EE
T ss_pred ceEEEEEEEEECCcccCCCEEEEEECCcceEEEEEECCEEEEEEc--------------CCC-----------Ccce-ee
Confidence 4678999999999653 3589999996 5899999999999875 212 2223 33
Q ss_pred cCcccccCCcc-eEEE
Q 006468 491 VPRSWLKPTKN-LLVV 505 (644)
Q Consensus 491 VP~~~Lk~g~N-~ivv 505 (644)
|+ ++|++|+| +|+|
T Consensus 120 it-~~l~~G~nn~l~V 134 (605)
T 3lpf_A 120 VT-PYVIAGKSVRITV 134 (605)
T ss_dssp CG-GGCCTTSEEEEEE
T ss_pred ch-hhccCCCeEEEEE
Confidence 76 68898887 5665
No 21
>1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A*
Probab=95.46 E-value=0.035 Score=63.44 Aligned_cols=87 Identities=9% Similarity=0.060 Sum_probs=65.8
Q ss_pred CCCeeEeeecCccccccCCCCCCCCHHHHHHHHHHHHHhCCceeeeeEEeccCCCCCCCCCCcccccccCCCCCCcCCCC
Q 006468 41 YKPTLWTEAWSGWFTEFGGAVHRRPVQDLAFAVARFIQKGGSFFNYYMYHGGTNFGRTAGGPFITTSYDYDAPLDEYGLM 120 (644)
Q Consensus 41 ~~P~~~~E~~~Gwf~~Wg~~~~~~~~~~~~~~~~~~l~~g~s~~n~YM~hGGTNfG~~~G~~~~~TSYDy~Apl~E~G~~ 120 (644)
++|.++|||..|..+ |+.......+..+.......++.|+..++||-+. .+++...+|+++ .|+++|.+
T Consensus 305 ~kP~~i~E~~~~~~~-w~~~~~~~~pg~~r~~~~~~~a~Ga~~~~~f~w~---------~~~~~~E~~~~g-~l~~~g~~ 373 (645)
T 1kwg_A 305 RGRFWVMEQQPGPVN-WAPHNPSPAPGMVRLWTWEALAHGAEVVSYFRWR---------QAPFAQEQMHAG-LHRPDSAP 373 (645)
T ss_dssp TTCEEEEEECCSCCS-SSSSCCCCCTTHHHHHHHHHHHTTCSCEEEECSB---------CCSSSTTTTSCC-SBCTTSCB
T ss_pred CCCEEEecCCCCCCC-CccCCCCCCccHHHHHHHHHHhcCCCEEEEeeec---------cCCCCccccccc-ccCCCCCc
Confidence 499999999999776 9865444444555555667788998876664332 344556789888 89999999
Q ss_pred CchhHHHHHHHHHHHHhhh
Q 006468 121 RQPKYGHLKQLHEAIKLCE 139 (644)
Q Consensus 121 ~~~ky~~lr~~~~~~~~~~ 139 (644)
+++|.+++++..+|+...
T Consensus 374 -~~~~~e~~~~~~~l~~~~ 391 (645)
T 1kwg_A 374 -DQGFFEAKRVAEELAALA 391 (645)
T ss_dssp -CHHHHHHHHHHHHHHTCC
T ss_pred -CHHHHHHHHHHHHHHhhc
Confidence 799999999999988653
No 22
>2je8_A Beta-mannosidase; glycoside hydrolase, hydrolase; HET: B3P; 1.7A {Bacteroides thetaiotaomicron} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2vr4_A* 2vl4_A* 2vmf_A* 2vo5_A* 2vot_A* 2vqt_A* 2vjx_A* 2vqu_A* 2wbk_A*
Probab=95.21 E-value=0.025 Score=66.89 Aligned_cols=71 Identities=23% Similarity=0.203 Sum_probs=53.0
Q ss_pred EEEEEEEeecCCCcccccCCCCceeeeCCcceEEEEEECCEEEEEEEccccCcceEEeecccccCCCCeEEEEEEe
Q 006468 266 YLWYMTSVEISSSESFLRGGQKPTLTVESAGHAVHVFINGQFLGSAFGTRENRRFTFSGPANLRAGINKIALLSIA 341 (644)
Q Consensus 266 yl~Y~t~i~~~~~~~~~~~g~~~~L~v~~~~D~a~Vfvng~~vG~~~~~~~~~~~~~~~~~~l~~g~~~L~ILven 341 (644)
-.|||++|.++... ..+....|.+.++...+.|||||++||...+.. ..+.++++-.|+.|.|+|.|.|.|
T Consensus 65 ~~~Yr~~f~~p~~~---~~~~~~~L~f~gv~~~a~V~vNG~~vg~~~~~~--~~~~~dIt~~l~~G~N~L~V~v~~ 135 (848)
T 2je8_A 65 DWEYRTSFIVSEEQ---LNRDGIQLIFEGLDTYADVYLNGSLLLKADNMF--VGYTLPVKSVLRKGENHLYIYFHS 135 (848)
T ss_dssp CEEEEEEEEECHHH---HTSSEEEEEESCCBSEEEEEETTEEEEEECBTT--CCEEEECGGGCCSEEEEEEEEEEC
T ss_pred CEEEEEEEEcChhh---cCCCeEEEEECCCCceeEEEECCEEeccccCCC--CCEEEcChHhhcCCCcEEEEEEeC
Confidence 45999999875320 012346899999999999999999999987533 345666554477789999999986
No 23
>3cmg_A Putative beta-galactosidase; structural genomics, PSI-2, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides fragilis}
Probab=95.12 E-value=0.044 Score=62.90 Aligned_cols=66 Identities=20% Similarity=0.268 Sum_probs=48.8
Q ss_pred CCceEEEEEEeCCCCC--CceEEEeCCC-ceEEEEECCeeeeeeeeccccCCCCCCccCCCcCCccccCCCCCCceeeee
Q 006468 414 QSLKWYKAYFDAPTGN--EPLALDLRSM-GKGQVWINGQSIGRYWMAYAKGDCKTCSYAGTFRPINCQRRCGHPTQRWYH 490 (644)
Q Consensus 414 ~~~~~Yr~~F~~p~~~--d~~~Ld~~g~-gKG~vwVNG~nlGRYW~~~~~g~~~~~~~~G~~~~~~~~~~~~~PQqtlY~ 490 (644)
.+..|||.+|++|+.. ..++|.+.|. ....|||||+.+|.-. |.| ...+ |-
T Consensus 48 ~g~~wYr~~f~~p~~~~~~~~~L~f~gv~~~a~V~vNG~~vg~~~--------------~~~-----------~~~~-~d 101 (667)
T 3cmg_A 48 RGIGNYEKALYIRPEWKGKRLFLRFDGVNSIADVFINRKHIGEHR--------------GGY-----------GAFI-FE 101 (667)
T ss_dssp CSEEEEEEEEECCGGGTTSEEEEEESCCBSEEEEEETTEEEEEEE--------------CSS-----------SCEE-EE
T ss_pred ceeEEEEEEEECCcccCCCEEEEEECCccceeEEEECCEEEeeec--------------CCc-----------ccEE-EE
Confidence 4679999999998632 3489999997 5899999999999875 111 2222 33
Q ss_pred cCcccccCC-cceEEEE
Q 006468 491 VPRSWLKPT-KNLLVVF 506 (644)
Q Consensus 491 VP~~~Lk~g-~N~ivvf 506 (644)
|.. +|+.| +|+|+|.
T Consensus 102 it~-~l~~G~~N~l~V~ 117 (667)
T 3cmg_A 102 ITD-LVKYGEKNSVLVR 117 (667)
T ss_dssp CTT-TSCTTSEEEEEEE
T ss_pred CCH-HHCCCCCcEEEEE
Confidence 654 78887 7998883
No 24
>3gm8_A Glycoside hydrolase family 2, candidate beta-GLYC; structural genomics, glycosidase, PSI-2, protein initiative; 2.40A {Bacteroides vulgatus}
Probab=94.88 E-value=0.045 Score=64.20 Aligned_cols=66 Identities=23% Similarity=0.503 Sum_probs=49.0
Q ss_pred CCceEEEEEEeCCCCC--CceEEEeCCC-ceEEEEECCeeeeeeeeccccCCCCCCccCCCcCCccccCCCCCCceeeee
Q 006468 414 QSLKWYKAYFDAPTGN--EPLALDLRSM-GKGQVWINGQSIGRYWMAYAKGDCKTCSYAGTFRPINCQRRCGHPTQRWYH 490 (644)
Q Consensus 414 ~~~~~Yr~~F~~p~~~--d~~~Ld~~g~-gKG~vwVNG~nlGRYW~~~~~g~~~~~~~~G~~~~~~~~~~~~~PQqtlY~ 490 (644)
.+..|||.+|++|+.. ..++|.+.|. ....|||||+-+|.-- |.| ...+ |-
T Consensus 65 ~g~~wYrk~f~vp~~~~~~~v~L~f~gv~~~a~V~vNG~~vG~~~--------------~g~-----------~pf~-~D 118 (801)
T 3gm8_A 65 AGISWYRKTFTIPSKWKNKKVQILFEGVYLNSEVWINGHWLGKRP--------------NGY-----------ISFV-YD 118 (801)
T ss_dssp CEEEEEEEEEECCSGGGSCEEEEEESCCBSCEEEEETTEEEEEEC--------------CSS-----------CCEE-EE
T ss_pred CceEEEEEEEEcCcccCCCEEEEEECccceEEEEEECCEEeeccc--------------CCc-----------ccEE-EE
Confidence 3578999999998642 3589999996 6899999999999752 212 2223 33
Q ss_pred cCcccccCCcceEEEE
Q 006468 491 VPRSWLKPTKNLLVVF 506 (644)
Q Consensus 491 VP~~~Lk~g~N~ivvf 506 (644)
|+. .||.|+|+|+|.
T Consensus 119 IT~-~Lk~G~N~L~V~ 133 (801)
T 3gm8_A 119 LTP-YLQEGKNQIAVK 133 (801)
T ss_dssp CGG-GCCSSEEEEEEE
T ss_pred CcH-hccCCCcEEEEE
Confidence 654 688899999883
No 25
>3hn3_A Beta-G1, beta-glucuronidase; lysosomal enzyme, acid hydrolase, glycosidase, disease mutat glycoprotein, hydrolase, lysosome, mucopolysaccharidosis; HET: NDG NAG BMA MAN GUP; 1.70A {Homo sapiens} PDB: 1bhg_A*
Probab=94.69 E-value=0.027 Score=63.97 Aligned_cols=66 Identities=15% Similarity=0.237 Sum_probs=48.4
Q ss_pred CCceEEEEEEeCCCC-----CCceEEEeCCCc-eEEEEECCeeeeeeeeccccCCCCCCccCCCcCCccccCCCCCCcee
Q 006468 414 QSLKWYKAYFDAPTG-----NEPLALDLRSMG-KGQVWINGQSIGRYWMAYAKGDCKTCSYAGTFRPINCQRRCGHPTQR 487 (644)
Q Consensus 414 ~~~~~Yr~~F~~p~~-----~d~~~Ld~~g~g-KG~vwVNG~nlGRYW~~~~~g~~~~~~~~G~~~~~~~~~~~~~PQqt 487 (644)
.+..|||.+|++|+. ...++|.+.|.. ...|||||+-+|.-. |.| ...+
T Consensus 76 ~G~~wYr~~f~~p~~~~~~~~~~~~L~f~gv~~~a~V~vNG~~vg~~~--------------~g~-----------~~~~ 130 (613)
T 3hn3_A 76 VGWVWYEREVILPERWTQDLRTRVVLRIGSAHSYAIVWVNGVDTLEHE--------------GGY-----------LPFE 130 (613)
T ss_dssp CSEEEEEEEECCCHHHHHCTTEEEEEEESCCCSEEEEEETTEEEEEEE--------------SSS-----------SCEE
T ss_pred ceeEEEEEEEEeCchhhhcCCCEEEEEECCcceEEEEEECCEEEeEEc--------------CCc-----------ceEE
Confidence 356799999999964 235899999974 899999999999865 212 2333
Q ss_pred eeecCcccccCCc----ceEEEE
Q 006468 488 WYHVPRSWLKPTK----NLLVVF 506 (644)
Q Consensus 488 lY~VP~~~Lk~g~----N~ivvf 506 (644)
|-|+ ++|+.|+ |+|+|.
T Consensus 131 -~dit-~~l~~g~~~~~n~l~V~ 151 (613)
T 3hn3_A 131 -ADIS-NLVQVGPLPSRLRITIA 151 (613)
T ss_dssp -EECH-HHHCCC---CCEEEEEE
T ss_pred -EECh-hhhcCCCCCcceEEEEE
Confidence 3376 5788885 888874
No 26
>2je8_A Beta-mannosidase; glycoside hydrolase, hydrolase; HET: B3P; 1.7A {Bacteroides thetaiotaomicron} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2vr4_A* 2vl4_A* 2vmf_A* 2vo5_A* 2vot_A* 2vqt_A* 2vjx_A* 2vqu_A* 2wbk_A*
Probab=94.55 E-value=0.043 Score=64.85 Aligned_cols=64 Identities=17% Similarity=0.221 Sum_probs=48.6
Q ss_pred ceEEEEEEeCCCC---CCceEEEeCCCc-eEEEEECCeeeeeeeeccccCCCCCCccCCCcCCccccCCCCCCceeeeec
Q 006468 416 LKWYKAYFDAPTG---NEPLALDLRSMG-KGQVWINGQSIGRYWMAYAKGDCKTCSYAGTFRPINCQRRCGHPTQRWYHV 491 (644)
Q Consensus 416 ~~~Yr~~F~~p~~---~d~~~Ld~~g~g-KG~vwVNG~nlGRYW~~~~~g~~~~~~~~G~~~~~~~~~~~~~PQqtlY~V 491 (644)
..|||.+|++|+. ...++|.+.|.. ...|||||+.+|+-+ |.| ...+ |-|
T Consensus 65 ~~~Yr~~f~~p~~~~~~~~~~L~f~gv~~~a~V~vNG~~vg~~~--------------~~~-----------~~~~-~dI 118 (848)
T 2je8_A 65 DWEYRTSFIVSEEQLNRDGIQLIFEGLDTYADVYLNGSLLLKAD--------------NMF-----------VGYT-LPV 118 (848)
T ss_dssp CEEEEEEEEECHHHHTSSEEEEEESCCBSEEEEEETTEEEEEEC--------------BTT-----------CCEE-EEC
T ss_pred CEEEEEEEEcChhhcCCCeEEEEECCCCceeEEEECCEEecccc--------------CCC-----------CCEE-EcC
Confidence 4599999999852 345899999974 899999999999876 212 2333 336
Q ss_pred CcccccCCcceEEEE
Q 006468 492 PRSWLKPTKNLLVVF 506 (644)
Q Consensus 492 P~~~Lk~g~N~ivvf 506 (644)
+. +|+.|+|+|+|.
T Consensus 119 t~-~l~~G~N~L~V~ 132 (848)
T 2je8_A 119 KS-VLRKGENHLYIY 132 (848)
T ss_dssp GG-GCCSEEEEEEEE
T ss_pred hH-hhcCCCcEEEEE
Confidence 65 788999999884
No 27
>3bga_A Beta-galactosidase; NYSGXRC, protein structure initiative II (PSI-II), glycosyl hydrolase family 2, jelly-roll fold; 2.10A {Bacteroides thetaiotaomicron vpi-5482} PDB: 3dec_A
Probab=94.29 E-value=0.07 Score=64.09 Aligned_cols=66 Identities=18% Similarity=0.342 Sum_probs=49.3
Q ss_pred CCceEEEEEEeCCCCC--CceEEEeCCC-ceEEEEECCeeeeeeeeccccCCCCCCccCCCcCCccccCCCCCCceeeee
Q 006468 414 QSLKWYKAYFDAPTGN--EPLALDLRSM-GKGQVWINGQSIGRYWMAYAKGDCKTCSYAGTFRPINCQRRCGHPTQRWYH 490 (644)
Q Consensus 414 ~~~~~Yr~~F~~p~~~--d~~~Ld~~g~-gKG~vwVNG~nlGRYW~~~~~g~~~~~~~~G~~~~~~~~~~~~~PQqtlY~ 490 (644)
.+..|||.+|++|+.. ..++|.+.|. ....|||||+-+|.-. |.| -..+ |-
T Consensus 125 ~~~~~Yrr~F~vp~~~~g~~v~L~F~gv~~~a~V~vNG~~vG~~~--------------gg~-----------~p~~-~D 178 (1010)
T 3bga_A 125 NEVGSYRRTFKVPADWKGRRVVLCCEGVISFYYVWVNGKLLGYNQ--------------GSK-----------TAAE-WD 178 (1010)
T ss_dssp CEEEEEEEEEECCGGGTTSEEEEEESCEESEEEEEETTEEEEEEE--------------CSS-----------SCEE-EE
T ss_pred CcEEEEEEEeEeCcccCCCEEEEEECCCCceeEEEECCEEEeeEe--------------CCC-----------Ccce-ee
Confidence 4578999999998642 3589999995 5899999999999765 212 2223 33
Q ss_pred cCcccccCCcceEEEE
Q 006468 491 VPRSWLKPTKNLLVVF 506 (644)
Q Consensus 491 VP~~~Lk~g~N~ivvf 506 (644)
|. ++|++|+|+|+|.
T Consensus 179 IT-~~L~~G~N~L~V~ 193 (1010)
T 3bga_A 179 IT-DVLSEGENVVALE 193 (1010)
T ss_dssp CG-GGCCSSEEEEEEE
T ss_pred hh-hhccCCCcEEEEE
Confidence 65 4789999999883
No 28
>3og2_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family 35, glycoprot hydrolase; HET: NAG BMA MAN GLC; 1.20A {Trichoderma reesei} PDB: 3ogr_A* 3ogs_A* 3ogv_A*
Probab=94.06 E-value=0.18 Score=59.69 Aligned_cols=40 Identities=25% Similarity=0.489 Sum_probs=32.1
Q ss_pred CceEEEEEEeCCCCCCceEEEeCCC-c-eEEEEECCeeeeee
Q 006468 415 SLKWYKAYFDAPTGNEPLALDLRSM-G-KGQVWINGQSIGRY 454 (644)
Q Consensus 415 ~~~~Yr~~F~~p~~~d~~~Ld~~g~-g-KG~vwVNG~nlGRY 454 (644)
+..|||++|+++.....++|.+.|- . --.|||||+-||..
T Consensus 711 G~~wYRG~F~a~~~~~~v~L~~~GG~af~~sVWLNG~flGs~ 752 (1003)
T 3og2_A 711 GTLLFRGRFTARTARQQLFLSTQGGSAFASSVWLNDRFIGSF 752 (1003)
T ss_dssp SCEEEEEEEECSSSSEEEEEEEECSTTCCEEEEETTEEEEEE
T ss_pred CCEEEeeEEECCCCceEEEEEEccccccccEEEECCEEeccc
Confidence 6789999999986544578888763 3 56999999999974
No 29
>1yq2_A Beta-galactosidase; glycosyl hydrolase family 2, TIM barrel, hexamer; 1.90A {Arthrobacter SP} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3
Probab=93.77 E-value=0.079 Score=63.76 Aligned_cols=66 Identities=32% Similarity=0.488 Sum_probs=49.5
Q ss_pred CCceEEEEEEeCCCCC-----CceEEEeCCC-ceEEEEECCeeeeeeeeccccCCCCCCccCCCcCCccccCCCCCCcee
Q 006468 414 QSLKWYKAYFDAPTGN-----EPLALDLRSM-GKGQVWINGQSIGRYWMAYAKGDCKTCSYAGTFRPINCQRRCGHPTQR 487 (644)
Q Consensus 414 ~~~~~Yr~~F~~p~~~-----d~~~Ld~~g~-gKG~vwVNG~nlGRYW~~~~~g~~~~~~~~G~~~~~~~~~~~~~PQqt 487 (644)
.+..|||.+|++|+.. ..++|.+.|. ....|||||+.+|+-. |.| -..+
T Consensus 117 ~~~~wYrr~F~vp~~~~~~g~~rv~L~F~gv~~~a~V~vNG~~VG~~~--------------gg~-----------~p~~ 171 (1024)
T 1yq2_A 117 NPTGDFRRRFDVPAQWFESTTAALTLRFDGVESRYKVWVNGQEIGVGS--------------GSR-----------LAQE 171 (1024)
T ss_dssp CCEEEEEEEEEECGGGGSTTEEEEEEEESCEESCEEEEETTEEEEEEC--------------CTT-----------SCEE
T ss_pred CceEEEEEEeEECchHhcCCCceEEEEECCCCceEEEEECCEEEEEEe--------------CCc-----------cceE
Confidence 4568999999998642 3489999995 5899999999999764 212 2223
Q ss_pred eeecCcccccCCcceEEEE
Q 006468 488 WYHVPRSWLKPTKNLLVVF 506 (644)
Q Consensus 488 lY~VP~~~Lk~g~N~ivvf 506 (644)
|-|. +.||.|+|+|+|.
T Consensus 172 -~DIT-~~Lk~G~N~L~V~ 188 (1024)
T 1yq2_A 172 -FDVS-DALRAGSNLLVVR 188 (1024)
T ss_dssp -EECT-TTCCSEEEEEEEE
T ss_pred -EecH-HhccCCCcEEEEE
Confidence 3366 5789999999884
No 30
>1jz7_A Lactase, beta-galactosidase, LACZ; TIM barrel (alpha/beta barrel), jelly-roll barrel, immunoglobulin, beta supersandwich, hydrolase; HET: GAL; 1.50A {Escherichia coli} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 PDB: 1hn1_A 1jyx_A* 1jz3_A* 1jz4_A* 1jz5_A* 1jz6_A* 1dp0_A* 3iap_A* 1jz8_A* 1jyn_A* 1jyv_A* 1jyw_A* 3iaq_A* 1px3_A 1px4_A* 3czj_A* 3i3e_A 3i3d_A* 3i3b_A 3dym_A ...
Probab=93.38 E-value=0.088 Score=63.35 Aligned_cols=66 Identities=15% Similarity=0.295 Sum_probs=48.8
Q ss_pred CCceEEEEEEeCCCC---CCceEEEeCCC-ceEEEEECCeeeeeeeeccccCCCCCCccCCCcCCccccCCCCCCceeee
Q 006468 414 QSLKWYKAYFDAPTG---NEPLALDLRSM-GKGQVWINGQSIGRYWMAYAKGDCKTCSYAGTFRPINCQRRCGHPTQRWY 489 (644)
Q Consensus 414 ~~~~~Yr~~F~~p~~---~d~~~Ld~~g~-gKG~vwVNG~nlGRYW~~~~~g~~~~~~~~G~~~~~~~~~~~~~PQqtlY 489 (644)
.+..|||.+|++|+. ...++|.+.|. ....|||||+-+|.-. |.| -..+ |
T Consensus 118 ~~~g~Yrr~F~vp~~~~~~~~v~L~F~gv~~~a~V~vNG~~vG~~~--------------gg~-----------~p~~-~ 171 (1023)
T 1jz7_A 118 NPTGCYSLTFNVDESWLQEGQTRIIFDGVNSAFHLWCNGRWVGYGQ--------------DSR-----------LPSE-F 171 (1023)
T ss_dssp CCEEEEEEEEEECHHHHHSSEEEEEESCEESEEEEEETTEEEEEEE--------------CTT-----------SCEE-E
T ss_pred CcEEEEEEEEEeCchhcCCCEEEEEECCCCcceEEEECCEEEcccc--------------CCC-----------CceE-E
Confidence 356899999999863 23489999997 5899999999999765 211 1222 3
Q ss_pred ecCcccccCCcceEEEE
Q 006468 490 HVPRSWLKPTKNLLVVF 506 (644)
Q Consensus 490 ~VP~~~Lk~g~N~ivvf 506 (644)
-|.. +|+.|+|+|+|.
T Consensus 172 DIT~-~L~~G~N~L~V~ 187 (1023)
T 1jz7_A 172 DLSA-FLRAGENRLAVM 187 (1023)
T ss_dssp ECTT-TCCSEEEEEEEE
T ss_pred ecHh-hccCCCcEEEEE
Confidence 3654 788899999883
No 31
>3oba_A Beta-galactosidase; TIM barrel, tetramer, GH2, glycosidase, hydrolase; 2.75A {Kluyveromyces lactis} PDB: 3ob8_A
Probab=93.07 E-value=0.077 Score=63.82 Aligned_cols=66 Identities=18% Similarity=0.311 Sum_probs=49.0
Q ss_pred CCceEEEEEEeCCCCC---CceEEEeCCC-ceEEEEECCeeeeeeeeccccCCCCCCccCCCcCCccccCCCCCCceeee
Q 006468 414 QSLKWYKAYFDAPTGN---EPLALDLRSM-GKGQVWINGQSIGRYWMAYAKGDCKTCSYAGTFRPINCQRRCGHPTQRWY 489 (644)
Q Consensus 414 ~~~~~Yr~~F~~p~~~---d~~~Ld~~g~-gKG~vwVNG~nlGRYW~~~~~g~~~~~~~~G~~~~~~~~~~~~~PQqtlY 489 (644)
.+..|||.+|++|+.. ..++|.+.|. ....|||||+-+|.-- |.| -..+ |
T Consensus 111 n~~g~Yrr~f~vp~~~~~~~~v~L~F~gv~~~a~V~vNG~~vG~~~--------------gg~-----------~p~~-~ 164 (1032)
T 3oba_A 111 NPTGVYARTFELDSKSIESFEHRLRFEGVDNCYELYVNGQYVGFNK--------------GSR-----------NGAE-F 164 (1032)
T ss_dssp CCEEEEEEEEEECHHHHHHEEEEEEESCEESEEEEEETTEEEEEEE--------------CTT-----------SCEE-E
T ss_pred CCeEEEEEEEEECchhcCCCEEEEEECCcceeEEEEECCEEEEEEe--------------CCc-----------ccEE-E
Confidence 4678999999999642 3589999997 4899999999999753 212 2223 3
Q ss_pred ecCcccccCCcceEEEE
Q 006468 490 HVPRSWLKPTKNLLVVF 506 (644)
Q Consensus 490 ~VP~~~Lk~g~N~ivvf 506 (644)
-|+. +|+.|+|+|+|.
T Consensus 165 DIT~-~lk~G~N~L~V~ 180 (1032)
T 3oba_A 165 DIQK-YVSEGENLVVVK 180 (1032)
T ss_dssp ECTT-TCCSEEEEEEEE
T ss_pred EChh-hccCCcEEEEEE
Confidence 3665 688899998884
No 32
>1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A*
Probab=93.06 E-value=0.27 Score=58.60 Aligned_cols=77 Identities=18% Similarity=0.191 Sum_probs=49.9
Q ss_pred CccEEEEEEEeecCCCcccccCCCCceeeeCCcc-----eEEEEEECCEEEEEEEccc-cCcceEEeecccc-cCCCCeE
Q 006468 263 TSDYLWYMTSVEISSSESFLRGGQKPTLTVESAG-----HAVHVFINGQFLGSAFGTR-ENRRFTFSGPANL-RAGINKI 335 (644)
Q Consensus 263 ~~Gyl~Y~t~i~~~~~~~~~~~g~~~~L~v~~~~-----D~a~Vfvng~~vG~~~~~~-~~~~~~~~~~~~l-~~g~~~L 335 (644)
..|.+|||++|+++.... .+....|.+..+. |+.+|||||..+|...... ..+.+.++.. .| +.|+|+|
T Consensus 849 ~~Gv~wyr~~f~L~~p~g---~d~pl~L~lg~~~~~~~~~~~~~~VNG~~iGry~~~~~pqr~y~VP~g-iLn~~G~N~i 924 (971)
T 1tg7_A 849 KPGIRFYSTSFDLDLPSG---YDIPLYFNFGNSTSTPAAYRVQLYVNGYQYGKYVNNIGPQTSFPVPEG-ILNYHGTNWL 924 (971)
T ss_dssp SSEEEEEEEEEECCCCTT---EECCEEEEECCCCSSCCCEEEEEEETTEEEEEEETTTCSCCEEEECBT-TBCTTSEEEE
T ss_pred CCceEEEEEEEeccCCCC---CCceEEEEcCCCCCCCccceEEEEECCEEEeeecCCCCCCEEEECCHH-HhCcCCccEE
Confidence 358999999998432210 0011235456666 9999999999999885322 2244445433 36 7889999
Q ss_pred EEEEEecC
Q 006468 336 ALLSIAVG 343 (644)
Q Consensus 336 ~ILven~G 343 (644)
.|-|-++.
T Consensus 925 ~vrv~~~~ 932 (971)
T 1tg7_A 925 ALSLWAQE 932 (971)
T ss_dssp EEEEEECS
T ss_pred EEEEecCC
Confidence 99665555
No 33
>2vzs_A CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, glucosamine, glycoside hydrolase; HET: GCS; 1.85A {Amycolatopsis orientalis} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2x05_A* 2x09_A* 2vzo_A 2vzt_A* 2vzv_A* 2vzu_A*
Probab=91.36 E-value=0.28 Score=59.16 Aligned_cols=69 Identities=16% Similarity=0.327 Sum_probs=47.5
Q ss_pred CCceEEEEEEeCCCCCCceEEEeCCCc-eEEEEECCeeeeeeeeccccCCCCCCccCCCcCCccccCCCCCCceeeeecC
Q 006468 414 QSLKWYKAYFDAPTGNEPLALDLRSMG-KGQVWINGQSIGRYWMAYAKGDCKTCSYAGTFRPINCQRRCGHPTQRWYHVP 492 (644)
Q Consensus 414 ~~~~~Yr~~F~~p~~~d~~~Ld~~g~g-KG~vwVNG~nlGRYW~~~~~g~~~~~~~~G~~~~~~~~~~~~~PQqtlY~VP 492 (644)
.+..|||.+|+++.....++|.+.|.. ...|||||+.+|.+=.+ .|.| -..+ |-|.
T Consensus 118 ~~~~wYrr~f~v~~~~~~v~L~F~gvd~~a~V~vNG~~vg~~~~h-----------~g~~-----------~~~~-~DIt 174 (1032)
T 2vzs_A 118 SVPWWYRTDLNVDDTSSRTYLDFSGVLSKADVWVNGTKVATKDQV-----------NGAY-----------TRHD-LDIT 174 (1032)
T ss_dssp SSCEEEEEEEEESCCSSEEEEEECCEESBEEEEETTEEEECTTTS-----------BSTT-----------CCEE-EECT
T ss_pred CccEEEEEEEEEeCCCCEEEEEECCcccceEEEECCEEecccccc-----------cCcc-----------eeEE-EECc
Confidence 357899999999222235899999974 89999999999875101 1212 2223 3355
Q ss_pred cccccCCcceEEEE
Q 006468 493 RSWLKPTKNLLVVF 506 (644)
Q Consensus 493 ~~~Lk~g~N~ivvf 506 (644)
. +|+.|+|+|+|.
T Consensus 175 ~-~l~~G~N~L~V~ 187 (1032)
T 2vzs_A 175 A-QVHTGVNSVAFK 187 (1032)
T ss_dssp T-TCCSEEEEEEEE
T ss_pred H-HhCCCCcEEEEE
Confidence 4 788899999884
No 34
>2okx_A Rhamnosidase B; alpha barrel, glycoside hydrolase family 78, I hydrolase; 1.90A {Bacillus SP}
Probab=81.90 E-value=2.6 Score=50.32 Aligned_cols=66 Identities=24% Similarity=0.546 Sum_probs=45.6
Q ss_pred CceEEEEEEeCCCCC-CceEEEeCCCceEEEEECCeeeeeeeeccccCCCCCCccCCCcCCccccCCCCCCceeeeecC-
Q 006468 415 SLKWYKAYFDAPTGN-EPLALDLRSMGKGQVWINGQSIGRYWMAYAKGDCKTCSYAGTFRPINCQRRCGHPTQRWYHVP- 492 (644)
Q Consensus 415 ~~~~Yr~~F~~p~~~-d~~~Ld~~g~gKG~vwVNG~nlGRYW~~~~~g~~~~~~~~G~~~~~~~~~~~~~PQqtlY~VP- 492 (644)
+..|||.+|+++... ..-.|-+++-|.=.+||||+.+|+ .|.. . | +...+| .-
T Consensus 22 ~~~~fRk~f~~~~~~~~~a~l~i~a~g~y~~~iNG~~vg~-~p~~-----------~-~-----------~~~~~y-~~~ 76 (956)
T 2okx_A 22 EWRCFRGSFDAPASVEGPAMLHITADSRYVLFVNGEQVGR-GPVR-----------S-W-----------PKEQFY-DSY 76 (956)
T ss_dssp EEEEEEEEEECCSCCSSCCEEEEEEESEEEEEETTEEEEE-ECCC-----------C-B-----------TTEEEE-EEE
T ss_pred ccceeEEEEECCCCccCceEEEEEecCcEEEEECCEECCC-CCCc-----------c-c-----------cccccc-eEE
Confidence 468999999998654 334566666677799999999998 5431 0 0 322223 22
Q ss_pred --cccccCC-cceEEE
Q 006468 493 --RSWLKPT-KNLLVV 505 (644)
Q Consensus 493 --~~~Lk~g-~N~ivv 505 (644)
.++|++| +|.|.|
T Consensus 77 Dvt~~L~~G~~N~i~v 92 (956)
T 2okx_A 77 DIGGQLRPGVRNTIAV 92 (956)
T ss_dssp ECTTTCCTTSEEEEEE
T ss_pred echhhcCCCCCcEEEE
Confidence 4678999 999887
No 35
>3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A*
Probab=81.85 E-value=4.5 Score=46.32 Aligned_cols=94 Identities=10% Similarity=0.133 Sum_probs=65.9
Q ss_pred CCCCCCeeEeeecCccccccCCCCCCCCHHHHHHHHHHHHHhCCceeeeeEEeccCCCCCCCCCCcccccccCCCCCCcC
Q 006468 38 NKPYKPTLWTEAWSGWFTEFGGAVHRRPVQDLAFAVARFIQKGGSFFNYYMYHGGTNFGRTAGGPFITTSYDYDAPLDEY 117 (644)
Q Consensus 38 ~~p~~P~~~~E~~~Gwf~~Wg~~~~~~~~~~~~~~~~~~l~~g~s~~n~YM~hGGTNfG~~~G~~~~~TSYDy~Apl~E~ 117 (644)
..+++|.++||..+| ...|........+..+....-..++.|+..+.||-++...+ |. -.| ..+.|+-+
T Consensus 297 ~~~g~p~~~mE~~~~-~~~w~~~~~~~~pg~~r~~~~~~~A~Ga~~v~~f~wr~~~~-g~--------E~~-h~g~~~~~ 365 (675)
T 3tty_A 297 LKSGQPFMLMEQTPG-VQNWQPYNSAKRPGVMRLWSYQAVAHGADTVMFFQLRRSVG-AC--------EKY-HGAVIEHV 365 (675)
T ss_dssp TTTTCCEEEEECCSS-CCTTSSBCCCCCTTHHHHHHHHHHHTTEEEEEESCSBCCCS-GG--------GTT-SCCSBCTT
T ss_pred hcCCCCeEEecCCCC-CCCCcCCCCCCCccHHHHHHHHHHhcccCeEeeeeccCCCC-ch--------hhh-hccccCCC
Confidence 334689999999987 45687544444556666666678999999888888765211 11 111 34678889
Q ss_pred CCCCchhHHHHHHHHHHHHhhhccc
Q 006468 118 GLMRQPKYGHLKQLHEAIKLCEYAL 142 (644)
Q Consensus 118 G~~~~~ky~~lr~~~~~~~~~~~~l 142 (644)
|.+.+..|.++++++..|+..++.+
T Consensus 366 g~~~~r~~~ev~~~~~~l~~l~~~~ 390 (675)
T 3tty_A 366 GHEHTRVFRECAELGKELQQLGDTI 390 (675)
T ss_dssp CSSCSHHHHHHHHHHHHHHHHTTTT
T ss_pred CCCCchHHHHHHHHHHHHHHhhhhh
Confidence 9875677999999999988774433
No 36
>2okx_A Rhamnosidase B; alpha barrel, glycoside hydrolase family 78, I hydrolase; 1.90A {Bacillus SP}
Probab=77.41 E-value=13 Score=44.30 Aligned_cols=106 Identities=20% Similarity=0.281 Sum_probs=63.4
Q ss_pred ccEEEEEEEeecCCCcccccCCCCceeeeCCcceEEEEEECCEEEEEEEccccC-c---ceEEeecccccCC-CCeEEEE
Q 006468 264 SDYLWYMTSVEISSSESFLRGGQKPTLTVESAGHAVHVFINGQFLGSAFGTREN-R---RFTFSGPANLRAG-INKIALL 338 (644)
Q Consensus 264 ~Gyl~Y~t~i~~~~~~~~~~~g~~~~L~v~~~~D~a~Vfvng~~vG~~~~~~~~-~---~~~~~~~~~l~~g-~~~L~IL 338 (644)
.+..+||++|.+.+... ....|.|.. .....+||||+.||.-.+ ... + -.++++.-.|+.| .|+|.|+
T Consensus 21 ~~~~~fRk~f~~~~~~~-----~~a~l~i~a-~g~y~~~iNG~~vg~~p~-~~~~~~~~y~~~Dvt~~L~~G~~N~i~v~ 93 (956)
T 2okx_A 21 NEWRCFRGSFDAPASVE-----GPAMLHITA-DSRYVLFVNGEQVGRGPV-RSWPKEQFYDSYDIGGQLRPGVRNTIAVL 93 (956)
T ss_dssp TEEEEEEEEEECCSCCS-----SCCEEEEEE-ESEEEEEETTEEEEEECC-CCBTTEEEEEEEECTTTCCTTSEEEEEEE
T ss_pred CccceeEEEEECCCCcc-----CceEEEEEe-cCcEEEEECCEECCCCCC-ccccccccceEEechhhcCCCCCcEEEEE
Confidence 46789999998753210 123565553 445599999999998544 211 1 1334444357889 9999999
Q ss_pred EEecCccccccCCCccccceeecEEEccccCCCccCccCCceE
Q 006468 339 SIAVGLPNVGLHYETWETGVRGAVVLHGLDHGNKDLTWQKWSY 381 (644)
Q Consensus 339 ven~Gr~N~G~~~~~~~KGI~G~V~l~g~~~~~~~L~~~~W~~ 381 (644)
+-+.|+.+|.. + ..+-|++..+.-+|.. .-.+...|+.
T Consensus 94 ~~~~g~~~~~~-~-~~~~~l~~~l~~dg~~---~i~tD~sWk~ 131 (956)
T 2okx_A 94 VLHFGVSNFYY-L-RGRGGLIAEIEADGRT---LAATDAAWRT 131 (956)
T ss_dssp EEECCSCBTTB-C-CCCCEEEEEEEETTEE---EEECSTTSEE
T ss_pred EEecCcccccc-c-CCCceEEEEEecCCcE---EEecCCCcee
Confidence 99988887543 2 2345565433323311 0112347985
No 37
>3cih_A Putative alpha-rhamnosidase; structural genomics, protein structure initiative II, NYSGXRC, (alpha/alpha)6 barrel domain; 2.33A {Bacteroides thetaiotaomicron vpi-5482}
Probab=70.13 E-value=5.3 Score=46.15 Aligned_cols=38 Identities=8% Similarity=0.005 Sum_probs=31.5
Q ss_pred CCceEEEEEEeCCCCCCceEEEeCCCceEEEEECCeeeeee
Q 006468 414 QSLKWYKAYFDAPTGNEPLALDLRSMGKGQVWINGQSIGRY 454 (644)
Q Consensus 414 ~~~~~Yr~~F~~p~~~d~~~Ld~~g~gKG~vwVNG~nlGRY 454 (644)
.+..+||.+|+++.. .-|-+++.|.=.++|||+.+|.|
T Consensus 56 ~~~~~~rk~f~~~~~---a~l~i~a~G~ye~~iNG~~vg~y 93 (739)
T 3cih_A 56 YVVVEFSKVLNLSEP---EEVFIAAEGTYNVKLDGKLQFGM 93 (739)
T ss_dssp CSEEEEEEEEEESSC---EEEEEEEESEEEEEETTEECSSC
T ss_pred CcceeEEEEEEcCCC---cEEEEEEcCcEEEEECCEEccCC
Confidence 367899999999764 35666788999999999999976
No 38
>3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482}
Probab=60.79 E-value=19 Score=40.81 Aligned_cols=70 Identities=17% Similarity=0.281 Sum_probs=45.2
Q ss_pred ccEEEEEEEeecCCCcccccCCCCceeeeCCcceEEEEEECCEEEEEEEccccCcceEEeecccccCCCCeEEEEEEecC
Q 006468 264 SDYLWYMTSVEISSSESFLRGGQKPTLTVESAGHAVHVFINGQFLGSAFGTRENRRFTFSGPANLRAGINKIALLSIAVG 343 (644)
Q Consensus 264 ~Gyl~Y~t~i~~~~~~~~~~~g~~~~L~v~~~~D~a~Vfvng~~vG~~~~~~~~~~~~~~~~~~l~~g~~~L~ILven~G 343 (644)
.+-.||+++|.++.. .+..|.+.+.. ...|||||.-+|......-...+-++.+ -|++|.|.|.| .|-.|
T Consensus 506 ~~p~~yk~~f~~~~~-------~Dt~Ld~~g~g-KG~vwVNG~nlGRYW~~GPqqtlYvP~~-~Lk~g~N~ivv-fE~~~ 575 (612)
T 3d3a_A 506 NQPAYYRSTFNLNEL-------GDTFLNMMNWS-KGMVWVNGHAIGRYWEIGPQQTLYVPGC-WLKKGENEIII-LDMAG 575 (612)
T ss_dssp CCCEEEEEEEEESSC-------CBEEEECTTCC-EEEEEETTEEEEEEETTCSCCEEEECGG-GCCSEEEEEEE-EESSC
T ss_pred CCCEEEEEEEECCCC-------CcEEEecCCCC-cEEEEECCEeEEeEEecCCEEEEEecHH-HcCCCCcEEEE-EEEcC
Confidence 368899999987532 12467776653 6689999999999874321223334433 26778887754 45554
No 39
>2y24_A Xylanase; hydrolase, GH5 family, aldotetraouronic acid; HET: XYP GCV PG4 PGE; 1.39A {Erwinia chrysanthemi} PDB: 1nof_A*
Probab=57.72 E-value=48 Score=34.89 Aligned_cols=110 Identities=12% Similarity=0.065 Sum_probs=60.9
Q ss_pred CCCCCeeEeeecCcc---ccccCCCCCCCCHHHHHHHHHHHHHhCCceeeeeEEeccCCCCCCCCCCcccccccCCCCCC
Q 006468 39 KPYKPTLWTEAWSGW---FTEFGGAVHRRPVQDLAFAVARFIQKGGSFFNYYMYHGGTNFGRTAGGPFITTSYDYDAPLD 115 (644)
Q Consensus 39 ~p~~P~~~~E~~~Gw---f~~Wg~~~~~~~~~~~~~~~~~~l~~g~s~~n~YM~hGGTNfG~~~G~~~~~TSYDy~Apl~ 115 (644)
.|+++++.||...+- ...| ..+.+++..+...|..+.+. |++ |+. ..+ ..||+
T Consensus 214 ~~~k~lw~TE~~~~~~~~~~~w------~~~~~~a~~i~~~l~~~~~~---~~~--------W~~----~~~---~Gli~ 269 (383)
T 2y24_A 214 NAGKQLWMTEHYVDSKQSANNW------TSAIEVGTELNASMVSNYSA---YVW--------WYI----RRS---YGLLT 269 (383)
T ss_dssp HTTCEEEEEEECSCTTSCTTCH------HHHHHHHHHHHHHHHTTCSE---EEE--------EES----BST---TSSBC
T ss_pred cCCCeEEEeccccCCCcccCch------hHHHHHHHHHHHHHhcCccE---EEE--------eec----cCC---CCeec
Confidence 468899999987531 1112 23455666666666665542 443 211 001 13788
Q ss_pred cCCCCCchhHHHHHHHHHHHHhhhccccCCCCcccCCCccceeeeeccCCcceeeEeeccCC
Q 006468 116 EYGLMRQPKYGHLKQLHEAIKLCEYALVSSDPTVTSLGTYQQAHVFSAGQQKCAAFLSNYNT 177 (644)
Q Consensus 116 E~G~~~~~ky~~lr~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~y~~~~~~~~~Fl~n~~~ 177 (644)
++|.+ ++.|+.|+...+|++.-...+.... .........+|...++.-++=+.|...
T Consensus 270 ~~G~~-~~~~y~~~hfSkfirPG~~ri~~~~----~~~~~l~~~Af~~pdg~~vvV~~N~~~ 326 (383)
T 2y24_A 270 EDGKV-SKRGYVMSQYARFVRPGALRIQATE----NPQSNVHLTAYKNTDGKMVIVAVNTND 326 (383)
T ss_dssp TTSCB-CHHHHHHHHHHTTSCTTCEEEEECS----CSBTTEEEEEEECTTCCEEEEEEECSS
T ss_pred CCCeE-eeHHHHHHHHhcccCCCCEEEEecC----CCCCceEEEEEECCCCCEEEEEEeCCC
Confidence 99999 6999999988888764333221100 001223455566555555555566543
No 40
>2nt0_A Glucosylceramidase; cerezyme, glucocerebrosidase, glucosylceramide, hydrolysis, disease, hydrolase; HET: NAG; 1.79A {Homo sapiens} SCOP: b.71.1.2 c.1.8.3 PDB: 1y7v_A* 2f61_A* 2j25_A* 2nsx_A* 1ogs_A* 2nt1_A* 3gxd_A* 3gxf_A* 3gxi_A* 3gxm_A* 3rik_A* 3ril_A* 2v3f_A* 2v3e_A* 2v3d_A* 2vt0_A* 2wcg_A* 2xwd_A* 2xwe_A* 2wkl_A* ...
Probab=56.11 E-value=28 Score=38.24 Aligned_cols=148 Identities=15% Similarity=0.059 Sum_probs=72.9
Q ss_pred CCCCCCCeeEeeecCcc--ccccCCCCCCCCHHHHHHHHHHHHHhCCceeeeeEE----eccCCCCCCCCCCcccccccC
Q 006468 37 PNKPYKPTLWTEAWSGW--FTEFGGAVHRRPVQDLAFAVARFIQKGGSFFNYYMY----HGGTNFGRTAGGPFITTSYDY 110 (644)
Q Consensus 37 ~~~p~~P~~~~E~~~Gw--f~~Wg~~~~~~~~~~~~~~~~~~l~~g~s~~n~YM~----hGGTNfG~~~G~~~~~TSYDy 110 (644)
+.+|+++++.+|...|. ++.+........++.++..+..-|..+++..-+... .||-|||.. ..
T Consensus 329 ~~~p~k~lw~TE~~~~~~~~~~~~~~~~w~~a~~~a~~ii~~l~~~~~~~~~Wnl~ld~~ggp~~~~n-~~--------- 398 (497)
T 2nt0_A 329 RLFPNTMLFASEACVGSKFWEQSVRLGSWDRGMQYSHSIITNLLYHVVGWTDWNLALNPEGGPNWVRN-FV--------- 398 (497)
T ss_dssp HHCTTSEEEEEEEECCCSTTSCSCCTTCHHHHHHHHHHHHHHHHTTEEEEEEEESEECTTSCCCSSCC-CC---------
T ss_pred HHCCCCcEEEecccCCCCCccCCCCcCcHHHHHHHHHHHHHHHhhcceeeEeeeeeecCCCCCCCCCC-cc---------
Confidence 45789999999998662 111111111123455666665556666543212111 378887641 11
Q ss_pred CCCCC--c-CCCC-CchhHHHHHHHHHHHHhhhccccCCCCcccCCCccceeeeeccCCcceeeEeeccCCc-cceEEEe
Q 006468 111 DAPLD--E-YGLM-RQPKYGHLKQLHEAIKLCEYALVSSDPTVTSLGTYQQAHVFSAGQQKCAAFLSNYNTK-SAARVTF 185 (644)
Q Consensus 111 ~Apl~--E-~G~~-~~~ky~~lr~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~y~~~~~~~~~Fl~n~~~~-~~~~v~~ 185 (644)
+++|. + .|.+ .+++|+.|+...+|++.-...+... ..........+|...++.-++=+.|.... ...+|..
T Consensus 399 ~~~i~v~~~~g~~~~~~~yY~~~hfSkfirPGa~rI~~~----~~~~~~l~~~Af~npdg~~vvV~~N~~~~~~~~~v~~ 474 (497)
T 2nt0_A 399 DSPIIVDITKDTFYKQPMFYHLGHFSKFIPEGSQRVGLV----ASQKNDLDAVALMHPDGSAVVVVLNRSSKDVPLTIKD 474 (497)
T ss_dssp CCSEEEEGGGTEEEECHHHHHHHHHHTTCCTTCEEEEEE----ESSCCSEEEEEEECTTSCEEEEEEECSSSCEEEEEEE
T ss_pred CceEEEeCCCCeEEECHHHHHHHhhhcccCCCCEEEEec----cCCCCceEEEEEECCCCCEEEEEEeCCCCCEEEEEEe
Confidence 12221 1 2332 1588999998888775322222100 00111234455655555555555664432 2233443
Q ss_pred C-C--eeeccCCCcee
Q 006468 186 N-G--RQYNLPPWSIS 198 (644)
Q Consensus 186 ~-~--~~~~l~~~sv~ 198 (644)
. + ..+.||+.||.
T Consensus 475 ~~~~~~~~~lpa~Sv~ 490 (497)
T 2nt0_A 475 PAVGFLETISPGYSIH 490 (497)
T ss_dssp TTTEEEEEEECTTEEE
T ss_pred CCCCEEEEEECCCeEE
Confidence 2 2 35567777754
No 41
>2wnw_A Activated by transcription factor SSRB; hydrolase, salmonella typhimurium, O-glycosyl hydrolase family 30; 2.00A {Salmonella enterica subsp}
Probab=45.87 E-value=64 Score=34.75 Aligned_cols=143 Identities=19% Similarity=0.225 Sum_probs=70.8
Q ss_pred CCCCCCCeeEeeecCccccccCCCCCC-CCHHHHHHHHHHHHHhCCceeeeeEEe----ccCCC-CCCCCCCcccccccC
Q 006468 37 PNKPYKPTLWTEAWSGWFTEFGGAVHR-RPVQDLAFAVARFIQKGGSFFNYYMYH----GGTNF-GRTAGGPFITTSYDY 110 (644)
Q Consensus 37 ~~~p~~P~~~~E~~~Gwf~~Wg~~~~~-~~~~~~~~~~~~~l~~g~s~~n~YM~h----GGTNf-G~~~G~~~~~TSYDy 110 (644)
+.+|+++++.+|...+ .|.+.... .+-++++..+..-+..+++..-+.... ||.|+ |.+.
T Consensus 283 ~~~p~k~lw~TE~~~~---~~~~~~~~~g~w~~~a~~ii~~~~~~~~~~~~Wnl~ld~~ggpn~~g~~~----------- 348 (447)
T 2wnw_A 283 QCLPDKKLLFSEGCVP---MESDAGSQIRHWHTYLHDMIGNFKSGCSGFIDWNLLLNSEGGPNHQGNLC----------- 348 (447)
T ss_dssp HHCTTSEEEEEECCCB---CCCSTTHHHHHHHHHHHHHHHHHHTTCCEEEEEESEEETTSCCCTTCCCB-----------
T ss_pred HHCCCCeEEEeccccC---CcccCCCCCCcHHHHHHHHHHHHhcCCEEEEEhhhhhCcCCCCccCCCCc-----------
Confidence 3568999999999754 23211100 011333444433356676643233222 77764 3221
Q ss_pred CCCCC---cCCCC-CchhHHHHHHHHHHHHhhhccccCCCCcccCCCccceeeeeccCCcceeeEeeccCC-ccceEEEe
Q 006468 111 DAPLD---EYGLM-RQPKYGHLKQLHEAIKLCEYALVSSDPTVTSLGTYQQAHVFSAGQQKCAAFLSNYNT-KSAARVTF 185 (644)
Q Consensus 111 ~Apl~---E~G~~-~~~ky~~lr~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~y~~~~~~~~~Fl~n~~~-~~~~~v~~ 185 (644)
+++|. +.|.+ .+++|+.|+...+|++.-...+... .........+|...++..++=+.|... ....+|.+
T Consensus 349 ~g~i~vd~~~g~~~~~~~yy~~~hfSkfirPGa~rI~~~-----~~~~~l~~~Af~~pdg~~vvVv~N~~~~~~~~~~~~ 423 (447)
T 2wnw_A 349 EAPIQYDAQNDVLRRNHSWYGIGHFCRYVRPGARVMLSS-----SYDNLLEEVGFVNPDGERVLVVYNRDVQERRCRVLD 423 (447)
T ss_dssp CCSEEEETTTTEEEECHHHHHHHHHHTTCCTTCEEEEEE-----ESCTTEEEEEEECTTSCEEEEEEECSSSCEEEEEEE
T ss_pred CccEEEeCCCCeEEEChHHHHHHHHHhhcCCCCEEEEee-----cCCCCeEEEEEECCCCCEEEEEEeCCCCCEEEEEEE
Confidence 12331 23332 2589999998888876422222100 001123444565555555555566443 23344555
Q ss_pred CCe--eeccCCCcee
Q 006468 186 NGR--QYNLPPWSIS 198 (644)
Q Consensus 186 ~~~--~~~l~~~sv~ 198 (644)
.+. .+.||+.||.
T Consensus 424 ~g~~~~~~lpa~Sv~ 438 (447)
T 2wnw_A 424 GDKEIALTLPPSGAS 438 (447)
T ss_dssp TTEEEEEEECTTCEE
T ss_pred CCcEEEEEECCCeEE
Confidence 553 5567887764
No 42
>4e8d_A Glycosyl hydrolase, family 35; TIM barrel, beta-propeller, glycohydrolase; 1.80A {Streptococcus pneumoniae} PDB: 4e8c_A
Probab=43.28 E-value=54 Score=36.84 Aligned_cols=70 Identities=20% Similarity=0.325 Sum_probs=43.7
Q ss_pred ccEEEEEEEeecCCCcccccCCCCceeeeCCcceEEEEEECCEEEEEEEccccCcceEEeecccccCCCCeEEEEEEecC
Q 006468 264 SDYLWYMTSVEISSSESFLRGGQKPTLTVESAGHAVHVFINGQFLGSAFGTRENRRFTFSGPANLRAGINKIALLSIAVG 343 (644)
Q Consensus 264 ~Gyl~Y~t~i~~~~~~~~~~~g~~~~L~v~~~~D~a~Vfvng~~vG~~~~~~~~~~~~~~~~~~l~~g~~~L~ILven~G 343 (644)
.+=.+|+.+|.+... .+..|.+.+-. .-.|||||.-+|......-..++-++.+ -|++|.|+|.| .|-.|
T Consensus 504 ~~P~fy~g~f~~~~~-------~DTfLd~~gwg-KG~v~VNG~nLGRYW~~GPQ~tLYvP~~-~Lk~G~NeIvv-fEl~~ 573 (595)
T 4e8d_A 504 GQPAFYAYDFTVEEP-------KDTYLDLSEFG-KGVAFVNGQNLGRFWNVGPTLSLYIPHS-YLKEGANRIII-FETEG 573 (595)
T ss_dssp TSCEEEEEEEEESSC-------CBEEEECTTCC-EEEEEETTEEEEEEETTCSBCEEEECGG-GSCSEEEEEEE-EESSS
T ss_pred CCCeEEEEEEEcCCC-------CCEEEeCCCCc-eEEEEECCeeeecccCCCCeEEEEecHH-HhCcCCceEEE-EEecC
Confidence 456789999986422 12456666553 4579999999999864221233444433 37888888755 44434
No 43
>3kl0_A Glucuronoxylanase XYNC; alpha beta barrel, (beta/alpha)8 barrel (beta/alpha)8 + beta motif family, hydrolase; HET: TAR HIS; 1.64A {Bacillus subtilis} PDB: 3gtn_A* 3kl3_A* 3kl5_A*
Probab=34.37 E-value=2.4e+02 Score=29.77 Aligned_cols=81 Identities=14% Similarity=0.140 Sum_probs=52.0
Q ss_pred CCCCCCCeeEeeecCccccccCCCCCCCCHHHHHHHHHHHHHhC-CceeeeeEEeccCCCCCCCCCCcccccccCCCCCC
Q 006468 37 PNKPYKPTLWTEAWSGWFTEFGGAVHRRPVQDLAFAVARFIQKG-GSFFNYYMYHGGTNFGRTAGGPFITTSYDYDAPLD 115 (644)
Q Consensus 37 ~~~p~~P~~~~E~~~Gwf~~Wg~~~~~~~~~~~~~~~~~~l~~g-~s~~n~YM~hGGTNfG~~~G~~~~~TSYDy~Apl~ 115 (644)
+.+|+++++.||...++.+..+.. ....+..++..+...|..+ .+ + |++ |+. ..+| .|+.
T Consensus 218 ~~~~~K~lw~TE~~~~~~~~~~~~-~w~~al~~a~~I~~~l~~~~~~--a-~v~--------Wnl----~~~~---Gp~~ 278 (401)
T 3kl0_A 218 QKGAGKDLWMTEVYYPNSDTNSAD-RWPEALDVSQHIHNAMVEGDFQ--A-YVW--------WYI----RRSY---GPMK 278 (401)
T ss_dssp HHCTTCEEEEEEECCSCCCTTCTT-CTTTTHHHHHHHHHHHHTSCCS--E-EEE--------EES----BSTT---SSBC
T ss_pred hhCCCCeEEEEecccCCCCCcccc-chhHHHHHHHHHHHHHHhccCc--E-EEE--------ccc----ccCC---CCcc
Confidence 345789999999988876543311 2234567777777666554 23 2 332 221 1222 3788
Q ss_pred cCCCCCchhHHHHHHHHHHHHh
Q 006468 116 EYGLMRQPKYGHLKQLHEAIKL 137 (644)
Q Consensus 116 E~G~~~~~ky~~lr~~~~~~~~ 137 (644)
++|.+ +++|+.|....+|++.
T Consensus 279 ~~G~~-~~~~y~l~hfSrfIrP 299 (401)
T 3kl0_A 279 EDGTI-SKRGYNMAHFSKFVRP 299 (401)
T ss_dssp TTSSB-CHHHHHHHHHHTTSCT
T ss_pred CCCeE-chHHHHHHHhhcccCC
Confidence 89999 7999999988887763
No 44
>3cih_A Putative alpha-rhamnosidase; structural genomics, protein structure initiative II, NYSGXRC, (alpha/alpha)6 barrel domain; 2.33A {Bacteroides thetaiotaomicron vpi-5482}
Probab=34.35 E-value=27 Score=40.14 Aligned_cols=58 Identities=12% Similarity=0.113 Sum_probs=41.7
Q ss_pred ccEEEEEEEeecCCCcccccCCCCceeeeCCcceEEEEEECCEEEEEEEccccCcceEEeecccccCCCCeEEEEEEec
Q 006468 264 SDYLWYMTSVEISSSESFLRGGQKPTLTVESAGHAVHVFINGQFLGSAFGTRENRRFTFSGPANLRAGINKIALLSIAV 342 (644)
Q Consensus 264 ~Gyl~Y~t~i~~~~~~~~~~~g~~~~L~v~~~~D~a~Vfvng~~vG~~~~~~~~~~~~~~~~~~l~~g~~~L~ILven~ 342 (644)
+.-.++|++|.+.+. ..|.|. ..-...+||||+.||.. . +. +.|++|+|+|.+++-|-
T Consensus 56 ~~~~~~rk~f~~~~~---------a~l~i~-a~G~ye~~iNG~~vg~y----~-~r------~~L~~G~N~i~v~lg~g 113 (739)
T 3cih_A 56 YVVVEFSKVLNLSEP---------EEVFIA-AEGTYNVKLDGKLQFGM----P-ET------LLLPAGKHSLNIKVWNQ 113 (739)
T ss_dssp CSEEEEEEEEEESSC---------EEEEEE-EESEEEEEETTEECSSC----C-SE------EEECSEEEEEEEEEECS
T ss_pred CcceeEEEEEEcCCC---------cEEEEE-EcCcEEEEECCEEccCC----C-Cc------eEecCCceEEEEEEEeC
Confidence 357889999987643 367776 45577899999999941 1 11 23678999999988765
No 45
>4aw7_A GH86A beta-porphyranase; hydrolase, porphyran-hexa-oligosaccharide, complex; HET: GLA GAL L6S AAL; 1.33A {Bacteroides plebeius}
Probab=33.28 E-value=26 Score=39.26 Aligned_cols=34 Identities=24% Similarity=0.225 Sum_probs=25.3
Q ss_pred eeeecCcccccCCcceEEE-EEecCCCCcceEEEee
Q 006468 487 RWYHVPRSWLKPTKNLLVV-FEELGGDASRISLVKR 521 (644)
Q Consensus 487 tlY~VP~~~Lk~g~N~ivv-fE~~g~~~~~i~l~~~ 521 (644)
.+. ||..+|+.+.|+|.| |-..||...+|.|...
T Consensus 552 eip-Vp~~lL~~~~NtI~VtFPD~GG~VsSv~L~v~ 586 (591)
T 4aw7_A 552 EVP-FDIQLLKNGDNNVDITFSDGGGHVSSMILQVE 586 (591)
T ss_dssp EEE-ECGGGCCSEEEEEEEECSSCCSEEEEEEEEEE
T ss_pred Eec-CCHHHHhcCCCeEEEEecCCCCeEEEEEEEEE
Confidence 344 999999988999988 6666776666666543
No 46
>4esn_A Hypothetical protein; protein of PF07009 family, DUF1312, structural genomics, JOI for structural genomics, JCSG; HET: PE4; 2.20A {Ruminococcus gnavus}
Probab=26.16 E-value=2.6e+02 Score=23.97 Aligned_cols=75 Identities=20% Similarity=0.338 Sum_probs=47.7
Q ss_pred ceEEEEECCeeeeeeeeccccCCCCCCccCCCcCCccccCCCCCCceeeeecCcccccCCcceEEEEEecCCCCcceEEE
Q 006468 440 GKGQVWINGQSIGRYWMAYAKGDCKTCSYAGTFRPINCQRRCGHPTQRWYHVPRSWLKPTKNLLVVFEELGGDASRISLV 519 (644)
Q Consensus 440 gKG~vwVNG~nlGRYW~~~~~g~~~~~~~~G~~~~~~~~~~~~~PQqtlY~VP~~~Lk~g~N~ivvfE~~g~~~~~i~l~ 519 (644)
.+.+|++||.-++||=.. . . +++. |+ |.|.|.| .+ ..|++.
T Consensus 18 ~~avI~vdGk~~~~i~L~------------~-------------~-~~i~-i~------g~n~IeI---~d---g~vrv~ 58 (104)
T 4esn_A 18 QGAVVTVDGEVYGTYSLA------------K-------------D-QTIE-IQ------DGNRLRI---QN---GQAKME 58 (104)
T ss_dssp CEEEEEETTEEEEEEETT------------S-------------C-EEEE-ET------TTEEEEE---ET---TEEEEE
T ss_pred CEEEEEECCEEEEEEECC------------C-------------C-cEEE-EC------CcEEEEE---EC---CEEEEE
Confidence 468899999999999421 1 3 3444 77 5565433 23 236665
Q ss_pred ee-cccccccccccCCCCCCCcccccCCCCCcCCCCceeeecCCCCeEeeeee
Q 006468 520 KR-SVARVCADAHEHHPTTDNNDIENKGNSNSTGNAKVLLQCAPGQSITSIEF 571 (644)
Q Consensus 520 ~~-~~~~~c~~~~e~~p~~~~~~~~~~~~~~~ce~~~~~L~C~~g~~Is~I~~ 571 (644)
.. --+++|.+. .|.++.++ .+-|-+.+++..|..
T Consensus 59 es~CPdkiCv~~---------GwIs~~Gq---------~IVCLPnklvI~I~g 93 (104)
T 4esn_A 59 WADCPDQLCVHQ---------KAISRTGE---------SIICLPNQVVVSVQG 93 (104)
T ss_dssp EECCSSCHHHHS---------CCBCSTTC---------EEEETTTTEEEEEEC
T ss_pred ECCCCCcchhhC---------CCcCCCCC---------EEEEcCCEEEEEEEe
Confidence 54 445777766 57666666 688887776656753
No 47
>3thd_A Beta-galactosidase; TIM-barrel domain, glycosyl hydrolase, glycosylation, hydrolase; HET: NAG DGJ; 1.79A {Homo sapiens} PDB: 3thc_A*
Probab=26.08 E-value=1.6e+02 Score=33.44 Aligned_cols=76 Identities=18% Similarity=0.099 Sum_probs=44.0
Q ss_pred CccEEEEEEEeecCCCcccccCCCCceeeeCCcceEEEEEECCEEEEEEEcc-ccCcceEEeecccccCC-CCeEEEEEE
Q 006468 263 TSDYLWYMTSVEISSSESFLRGGQKPTLTVESAGHAVHVFINGQFLGSAFGT-RENRRFTFSGPANLRAG-INKIALLSI 340 (644)
Q Consensus 263 ~~Gyl~Y~t~i~~~~~~~~~~~g~~~~L~v~~~~D~a~Vfvng~~vG~~~~~-~~~~~~~~~~~~~l~~g-~~~L~ILve 340 (644)
..+=.+|+.+|.+....+ ....+..|.+.+-. .-.|||||.-+|..... .-..++-++.++ |++| .|+|. +.|
T Consensus 523 ~~~P~fy~g~f~i~~~~~--~~p~DTFLd~~gWg-KGvV~VNG~NLGRYW~~~GPQ~TLYvP~p~-Lk~G~~NeIi-VfE 597 (654)
T 3thd_A 523 YTLPAFYMGNFSIPSGIP--DLPQDTFIQFPGWT-KGQVWINGFNLGRYWPARGPQLTLFVPQHI-LMTSAPNTIT-VLE 597 (654)
T ss_dssp CCCCEEEEEEECCCSSCT--TCSCBEEEECTTCC-SEEEEETTEEEEEECTTTCSCCCEEECGGG-CCSSSCEEEE-EEE
T ss_pred CCCCEEEEEEEEccCCCC--CCCCCEEEeCCCCC-eEEEEECCcccccccCCCCCeEEEEecHHH-hCCCCCceEE-EEE
Confidence 345678999998643100 00012456666543 34799999999998621 112344455443 6777 88885 455
Q ss_pred ecC
Q 006468 341 AVG 343 (644)
Q Consensus 341 n~G 343 (644)
-.+
T Consensus 598 le~ 600 (654)
T 3thd_A 598 LEW 600 (654)
T ss_dssp SSC
T ss_pred eec
Confidence 443
No 48
>1nkg_A Rhamnogalacturonase B; polysaccharide lyase, carbohydrate active enzyme, pectin, LY; 1.50A {Aspergillus aculeatus} SCOP: b.3.1.2 b.18.1.25 b.30.5.10 PDB: 2xhn_A* 3njv_A* 3njx_A
Probab=25.31 E-value=63 Score=35.65 Aligned_cols=62 Identities=18% Similarity=0.105 Sum_probs=35.7
Q ss_pred ceEEEEECCeeeeeeeeccccCCCCCCccCCCcCCccccCCCCCCceeeeecCcccccCCcceEEEEEecCC
Q 006468 440 GKGQVWINGQSIGRYWMAYAKGDCKTCSYAGTFRPINCQRRCGHPTQRWYHVPRSWLKPTKNLLVVFEELGG 511 (644)
Q Consensus 440 gKG~vwVNG~nlGRYW~~~~~g~~~~~~~~G~~~~~~~~~~~~~PQqtlY~VP~~~Lk~g~N~ivvfE~~g~ 511 (644)
++=+|.|||.+ |.-- ....-..+.|-++|++ .|.-..--+.||+.+|+.|.|+|.|--..+.
T Consensus 428 ~~~qV~VN~~~-~~~~-~~~~~~~~~~i~R~~~--------~G~~~~~~~~ipa~~L~~G~NtI~lt~~~~s 489 (508)
T 1nkg_A 428 GRPQATINSYT-GSAP-AAPTNLDSRGVTRGAY--------RGLGEVYDVSIPSGTIVAGTNTITINVISGS 489 (508)
T ss_dssp CEEEEEETTEE-CCCC-CCCCCCCSCCGGGTCC--------CSCCCEEEEEECTTSSCSEEEEEEEEEECSC
T ss_pred CCeEEEECCcC-CcCc-cccccCCCCeEEecce--------eeeeEEEEEEEcHHHeecCceEEEEEeccCC
Confidence 67899999963 3221 1100011344455533 2223334455999999999999988544443
No 49
>2bgo_A Endo-B1,4-mannanase 5C; carbohydrate binding protein, carbohydrate binding module; NMR {Cellvibrio japonicus} PDB: 2bgp_A
Probab=24.30 E-value=97 Score=28.18 Aligned_cols=46 Identities=17% Similarity=0.120 Sum_probs=27.1
Q ss_pred EEEECCEEEEEEEccccCcceEEeecccccCCCCeEEEEEE--ecCccc
Q 006468 300 HVFINGQFLGSAFGTRENRRFTFSGPANLRAGINKIALLSI--AVGLPN 346 (644)
Q Consensus 300 ~Vfvng~~vG~~~~~~~~~~~~~~~~~~l~~g~~~L~ILve--n~Gr~N 346 (644)
.++|||. .+.+.=............+.|++|+|+|.|... +.|..+
T Consensus 66 ~L~VNG~-~~~V~fP~tt~~~~~~~~V~L~aG~NtI~i~~~~g~WG~~~ 113 (140)
T 2bgo_A 66 TLVMDGT-ALSYAFAEATVPVTYVQTKTLSAGNHSFGVRVGSSDWGYMN 113 (140)
T ss_dssp EEEETTE-EEEEEEESCCSCEEEEEEEEECSSCEEEEEECCSSSCCCCE
T ss_pred EEEECCc-eeEEEECCcCCcEEEEEEEEecCCccEEEEEecCCCceeEE
Confidence 7899999 777642211111222223678999999999553 344443
No 50
>2wz8_A Cellulosome protein dockerin type I; sugar binding protein; 1.50A {Clostridium thermocellum}
Probab=23.81 E-value=55 Score=30.03 Aligned_cols=13 Identities=15% Similarity=0.345 Sum_probs=11.1
Q ss_pred ccCCcceEEEEEe
Q 006468 496 LKPTKNLLVVFEE 508 (644)
Q Consensus 496 Lk~g~N~ivvfE~ 508 (644)
|++|.|+|.|--.
T Consensus 120 L~aG~NtI~~~~~ 132 (156)
T 2wz8_A 120 LNAGNNTIRFYNG 132 (156)
T ss_dssp ECSEEEEEEEECC
T ss_pred ECCCceEEEEEec
Confidence 9999999999644
No 51
>2w3j_A Carbohydrate binding module; sugar-binding protein, family 35, uronic acid sugars; 1.70A {Uncultured bacterium}
Probab=22.64 E-value=89 Score=28.06 Aligned_cols=41 Identities=22% Similarity=0.179 Sum_probs=27.1
Q ss_pred EEEEEECCEEEEEEEcc----ccCcceEEeecccccCCCCeEEEEE
Q 006468 298 AVHVFINGQFLGSAFGT----RENRRFTFSGPANLRAGINKIALLS 339 (644)
Q Consensus 298 ~a~Vfvng~~vG~~~~~----~~~~~~~~~~~~~l~~g~~~L~ILv 339 (644)
.+.|+|||+.++.+.-. ++. -.+..+.+.|++|.|+|.|-.
T Consensus 68 ~~~l~VNG~~~~~v~~p~Tg~W~~-w~t~~~~v~L~aG~ntI~l~~ 112 (145)
T 2w3j_A 68 RATVVVNDSQIKTLDFPTNSNWTQ-WQTVNVDIPLKAGTNSIKLVA 112 (145)
T ss_dssp CEEEEETTEEEEEECCCCCSCTTS-CEEEEEEEEECSEEEEEEEEE
T ss_pred EEEEEECCeEeeEEEecCCCCCCe-eEEEEEEEEECCCceEEEEEE
Confidence 57889999998776421 211 122344567899999998854
No 52
>3e5a_B Targeting protein for XKLP2; aurora A, serine/threonine-protein kinase, cofactor, TPX2, V inhibitor, phosphorylation, ATP-binding, cell cycle; HET: TPO VX6; 2.30A {Homo sapiens} PDB: 3ha6_B* 1ol5_B*
Probab=21.50 E-value=28 Score=24.96 Aligned_cols=10 Identities=60% Similarity=1.255 Sum_probs=7.6
Q ss_pred ccccccCCCC
Q 006468 104 ITTSYDYDAP 113 (644)
Q Consensus 104 ~~TSYDy~Ap 113 (644)
+.|||-||||
T Consensus 5 v~~sYSfDaP 14 (44)
T 3e5a_B 5 VKSSYSYDAP 14 (44)
T ss_dssp --CCCCCSSC
T ss_pred cccceeccCC
Confidence 5789999999
Done!