BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006471
(643 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255555629|ref|XP_002518850.1| hypothetical protein RCOM_1311830 [Ricinus communis]
gi|223541837|gb|EEF43383.1| hypothetical protein RCOM_1311830 [Ricinus communis]
Length = 694
Score = 1005 bits (2598), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/648 (77%), Positives = 561/648 (86%), Gaps = 12/648 (1%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
MEQLEASTNQELNQR+PLF LPSKILCRV+NIHL+AEQ+TDEVYAQITLLPE Q EPT+
Sbjct: 52 MEQLEASTNQELNQRVPLFNLPSKILCRVINIHLLAEQDTDEVYAQITLLPESDQTEPTS 111
Query: 61 PDPCPAD-SPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
PDP PA+ S RP VHSF KVLTASDTSTHGGFSVLRKHATECLP LDM Q TPTQELVAK
Sbjct: 112 PDPSPAEPSRRPAVHSFCKVLTASDTSTHGGFSVLRKHATECLPQLDMTQPTPTQELVAK 171
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGD+FVFLRGENGEL VGVR LAR
Sbjct: 172 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVRRLAR 231
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFA 239
QQSSMPSSVISSQSMHLGVLATASHAVATQT+FVVYYKPRTSQFIISLNKYLEA+NNKF+
Sbjct: 232 QQSSMPSSVISSQSMHLGVLATASHAVATQTLFVVYYKPRTSQFIISLNKYLEAINNKFS 291
Query: 240 VGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPW 299
VGMR+KMRFEGEDSPERRFSGT+VGVEDFSPHW DSKWR LKVQWDEPASI RPD+VSPW
Sbjct: 292 VGMRFKMRFEGEDSPERRFSGTIVGVEDFSPHWLDSKWRQLKVQWDEPASIPRPDKVSPW 351
Query: 300 EIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTA 359
EIEPF ASA N+ QPV KNKRPR +EVP LDL S AS W++RL QSH+LTQLSVTA
Sbjct: 352 EIEPFSASAPSNISQPVPLKNKRPRPPIEVPTLDLSSTASPLWNSRLTQSHDLTQLSVTA 411
Query: 360 EDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAW 419
E KR +NH+ WHHK +D +S+SN +SRTQ++G WL+SP V SQ LFQE +D+K++S W
Sbjct: 412 EGKRNENHIMWHHKQNDINSHSNSISRTQTEGGWLSSPLVNVSQHLFQEVTEDSKSVSNW 471
Query: 420 PAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVP---- 475
P SG+STP SK ND++L+ VE GRK++ TS RLFGIELINH+ SS P+EK P
Sbjct: 472 PVVSGYSTPQSSK-LNDSILDPVEKGRKSDVATSYRLFGIELINHSASSLPTEKAPAQPL 530
Query: 476 -VSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRT 534
VSS TTE H++ST+S AADSD KSDI+ KE+K EQ+ VSPK++QS+QS S RSRT
Sbjct: 531 SVSSGTTEAHVVSTLS-AADSDQKSDIS---KERKPEQLHVSPKDAQSRQSS-ASTRSRT 585
Query: 535 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 594
KVQMQGVAVGRA+DLT + GY+ L+DELEEMFDIKGQLH R KWEIVYTDDEGDMMLVGD
Sbjct: 586 KVQMQGVAVGRAIDLTMIKGYNQLLDELEEMFDIKGQLHPRDKWEIVYTDDEGDMMLVGD 645
Query: 595 DPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGEDILLSSDSAE 642
DPW EFCNMV+RIFICSSQDVKKM PGSKLPMFS EGE ++SSDSA+
Sbjct: 646 DPWPEFCNMVRRIFICSSQDVKKMMPGSKLPMFSTEGEGTVISSDSAD 693
>gi|297742361|emb|CBI34510.3| unnamed protein product [Vitis vinifera]
Length = 682
Score = 942 bits (2434), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/649 (71%), Positives = 531/649 (81%), Gaps = 16/649 (2%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
+EQLEASTNQEL+QRIPLF LPSKILCRV++I L AEQETDEVYAQITLLPEP Q EP +
Sbjct: 42 VEQLEASTNQELSQRIPLFNLPSKILCRVIHIQLRAEQETDEVYAQITLLPEPDQAEPRS 101
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
PDPC + PRP VHSF KVLTASDTSTHGGFSVLRKHA ECLP LDMNQ+TPTQELVAKD
Sbjct: 102 PDPCTPEPPRPTVHSFCKVLTASDTSTHGGFSVLRKHANECLPQLDMNQATPTQELVAKD 161
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGD+FVFLRG+NGEL VGVR LARQ
Sbjct: 162 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGDNGELRVGVRRLARQ 221
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAV 240
QS+MP+SVISSQSMHLGVLATASHAVATQT+F+VYYKPRTSQFII LNKYLEAV+N FAV
Sbjct: 222 QSTMPTSVISSQSMHLGVLATASHAVATQTLFIVYYKPRTSQFIIGLNKYLEAVSNGFAV 281
Query: 241 GMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWE 300
GMR+KMRFEGEDSPERRFSGT+VG EDFSP WKDS+WRSLKVQWDEPASI RP++VSPWE
Sbjct: 282 GMRFKMRFEGEDSPERRFSGTIVGGEDFSPEWKDSEWRSLKVQWDEPASIPRPEKVSPWE 341
Query: 301 IEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAE 360
IE +V+S L P + KNKRPR + P +AASA W L QSH+LTQ+S TAE
Sbjct: 342 IEHYVSSVPQGLAPPGVLKNKRPRSNESPVPETGSAAASAVWHLGLTQSHDLTQMSSTAE 401
Query: 361 DKRIDNHVAWHHKHSD-----FSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKN 415
KR +NHV WHHK +D +SN+ +SRTQ++G WL+S V SQ FQ+A +D+K+
Sbjct: 402 GKRSENHVMWHHKQADIGGPLINSNTACVSRTQTEGSWLSSSHVSASQHQFQDATEDSKS 461
Query: 416 ISAWPAHSGHSTPHPSKPNNDTLLEQVETGRK--TETGTSCRLFGIELINHATSSAPSEK 473
+SAWPA SG+ST H SK +DT+++ G+K E TSCRLFG EL+NH +SS P K
Sbjct: 462 VSAWPALSGYSTLHSSKLTSDTIIDPNGNGKKAVAEMATSCRLFGFELMNH-SSSPPVGK 520
Query: 474 VPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSR 533
GH IS +S+ DSD KSD++K KE+KQ Q VSPKE QSKQ+C ++ RSR
Sbjct: 521 A-------HGHSIS-VSSGTDSDQKSDLSKASKEQKQGQSHVSPKEIQSKQNCYSNTRSR 572
Query: 534 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVG 593
TKVQMQG+AVGRA+DLT L GYD LIDELEEMF+IKG+L R KWEIV+TDDEGDMMLVG
Sbjct: 573 TKVQMQGIAVGRAVDLTALEGYDELIDELEEMFEIKGELRPRYKWEIVFTDDEGDMMLVG 632
Query: 594 DDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGEDILLSSDSAE 642
DDPW EFCNMV+RIFICSSQDVKKMSPGSKLP+ S+EGE +S DS E
Sbjct: 633 DDPWPEFCNMVRRIFICSSQDVKKMSPGSKLPISSMEGEGTTISLDSTE 681
>gi|359473930|ref|XP_002265162.2| PREDICTED: auxin response factor 9-like [Vitis vinifera]
Length = 693
Score = 932 bits (2410), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/664 (70%), Positives = 534/664 (80%), Gaps = 35/664 (5%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
+EQLEASTNQEL+QRIPLF LPSKILCRV++I L AEQETDEVYAQITLLPEP Q EP +
Sbjct: 42 VEQLEASTNQELSQRIPLFNLPSKILCRVIHIQLRAEQETDEVYAQITLLPEPDQAEPRS 101
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
PDPC + PRP VHSF KVLTASDTSTHGGFSVLRKHA ECLP LDMNQ+TPTQELVAKD
Sbjct: 102 PDPCTPEPPRPTVHSFCKVLTASDTSTHGGFSVLRKHANECLPQLDMNQATPTQELVAKD 161
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGD+FVFLRG+NGEL VGVR LARQ
Sbjct: 162 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGDNGELRVGVRRLARQ 221
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAV 240
QS+MP+SVISSQSMHLGVLATASHAVATQT+F+VYYKPRTSQFII LNKYLEAV+N FAV
Sbjct: 222 QSTMPTSVISSQSMHLGVLATASHAVATQTLFIVYYKPRTSQFIIGLNKYLEAVSNGFAV 281
Query: 241 GMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWE 300
GMR+KMRFEGEDSPERRFSGT+VG EDFSP WKDS+WRSLKVQWDEPASI RP++VSPWE
Sbjct: 282 GMRFKMRFEGEDSPERRFSGTIVGGEDFSPEWKDSEWRSLKVQWDEPASIPRPEKVSPWE 341
Query: 301 IEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLP---------------SAASAPWSAR 345
IE +V+S L P + KNKRPR S E P +P +AASA W
Sbjct: 342 IEHYVSSVPQGLAPPGVLKNKRPR-SNESP---VPGQGKFLHRFCFETGSAAASAVWHLG 397
Query: 346 LAQSHNLTQLSVTAEDKRIDNHVAWHHKHSD-----FSSNSNFMSRTQSDGEWLTSPRVK 400
L QSH+LTQ+S TAE KR +NHV WHHK +D +SN+ +SRTQ++G WL+S V
Sbjct: 398 LTQSHDLTQMSSTAEGKRSENHVMWHHKQADIGGPLINSNTACVSRTQTEGSWLSSSHVS 457
Query: 401 FSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRK--TETGTSCRLFG 458
SQ FQ+A +D+K++SAWPA SG+ST H SK +DT+++ G+K E TSCRLFG
Sbjct: 458 ASQHQFQDATEDSKSVSAWPALSGYSTLHSSKLTSDTIIDPNGNGKKAVAEMATSCRLFG 517
Query: 459 IELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPK 518
EL+NH +SS P K GH IS +S+ DSD KSD++K KE+KQ Q VSPK
Sbjct: 518 FELMNH-SSSPPVGKA-------HGHSIS-VSSGTDSDQKSDLSKASKEQKQGQSHVSPK 568
Query: 519 ESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKW 578
E QSKQ+C ++ RSRTKVQMQG+AVGRA+DLT L GYD LIDELEEMF+IKG+L R KW
Sbjct: 569 EIQSKQNCYSNTRSRTKVQMQGIAVGRAVDLTALEGYDELIDELEEMFEIKGELRPRYKW 628
Query: 579 EIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGEDILLSS 638
EIV+TDDEGDMMLVGDDPW EFCNMV+RIFICSSQDVKKMSPGSKLP+ S+EGE +S
Sbjct: 629 EIVFTDDEGDMMLVGDDPWPEFCNMVRRIFICSSQDVKKMSPGSKLPISSMEGEGTTISL 688
Query: 639 DSAE 642
DS E
Sbjct: 689 DSTE 692
>gi|356504356|ref|XP_003520962.1| PREDICTED: auxin response factor 9-like [Glycine max]
Length = 691
Score = 876 bits (2263), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/653 (70%), Positives = 524/653 (80%), Gaps = 24/653 (3%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
MEQLEASTNQELNQRIPL +LP+KILCRVVN+HL+AEQETDEVYAQITL+PE +Q+EP
Sbjct: 51 MEQLEASTNQELNQRIPLLKLPTKILCRVVNVHLLAEQETDEVYAQITLVPESNQDEPMN 110
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
PDPC A+ PR VHSFSKVLTASDTSTHGGFSVLRKHA ECLP LDM+Q TPTQELVAKD
Sbjct: 111 PDPCTAEPPRAPVHSFSKVLTASDTSTHGGFSVLRKHAMECLPALDMSQPTPTQELVAKD 170
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG+NGEL VGVR LARQ
Sbjct: 171 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGDNGELRVGVRRLARQ 230
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAV 240
SSMPSSVISSQSMHLGVLATASHAVATQT+FVVYYKPRTSQFIIS+NKYLEA+ N+F+V
Sbjct: 231 ASSMPSSVISSQSMHLGVLATASHAVATQTLFVVYYKPRTSQFIISVNKYLEAM-NRFSV 289
Query: 241 GMRYKMRFEGEDSPE--RRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSP 298
GMR KMRFEG+DS E +RFSGT+VGVED SPHW +SKWRSLKVQWDEPA++ RPDRVSP
Sbjct: 290 GMRLKMRFEGDDSAETDKRFSGTIVGVEDISPHWVNSKWRSLKVQWDEPAAVPRPDRVSP 349
Query: 299 WEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVT 358
WEIEPFVASA+ VQP + K KRPR E P +D SAAS W A L Q+ ++ Q +V
Sbjct: 350 WEIEPFVASASTPSVQPTMVKTKRPRPPSETPDVDTTSAASVFWDAGLQQA-DMAQKNVL 408
Query: 359 AEDKRIDNHVAWHHKHSDFSSNS---NFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKN 415
AE KR D+ WHH +D +S S N M R Q++G WL+SP LFQ+A DD+K+
Sbjct: 409 AESKRNDSTGTWHHMQTDMNSKSNSGNAMLRNQTEGSWLSSPHSSCPSHLFQDATDDSKS 468
Query: 416 ISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVP 475
+SAWP S PH S+ NND +L+QV+ K ET TS RLFGI+LI+H+ +S EK
Sbjct: 469 VSAWPV----SKPHSSRLNNDHVLDQVDKESKVETATSYRLFGIDLIDHSRNSPSVEKAS 524
Query: 476 VSS-----LTTEGHIISTISAAADSDGKSDI-AKEFKEKKQEQVQVSPKESQSKQSCLTS 529
+ +TTEG ST++ D+ SD+ KE+KQEQ QVSPKE+QSKQ C
Sbjct: 525 AQAGNAPKVTTEG-CTSTLT-RTDAGHLSDVPMASSKERKQEQQQVSPKETQSKQIC--- 579
Query: 530 NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDM 589
RSRTKVQMQGVAVGRA+DLT L GYD LI+ELEEMFDIKGQL R KWEIV+TDDEGDM
Sbjct: 580 -RSRTKVQMQGVAVGRAVDLTMLDGYDQLINELEEMFDIKGQLQHRNKWEIVFTDDEGDM 638
Query: 590 MLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGEDILLSSDSAE 642
MLVGDDPW EFCNMV+RIFICSSQDVKKMS GSKLP+ S+E + ++SSD+ E
Sbjct: 639 MLVGDDPWPEFCNMVRRIFICSSQDVKKMSCGSKLPISSVE-DGTVISSDTTE 690
>gi|356496084|ref|XP_003516900.1| PREDICTED: auxin response factor 9-like [Glycine max]
Length = 692
Score = 871 bits (2251), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/653 (70%), Positives = 522/653 (79%), Gaps = 23/653 (3%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
MEQLEASTNQELNQRIPL +LP+KILCRVVN+HL+AEQETDEVYAQITL+PE SQ+EPT
Sbjct: 51 MEQLEASTNQELNQRIPLLKLPTKILCRVVNVHLLAEQETDEVYAQITLVPESSQDEPTN 110
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
DPC A+ PR VHSFSKVLTASDTSTHGGFSVLRKHATECLP LDM+Q TPTQELVAKD
Sbjct: 111 ADPCTAEPPRAPVHSFSKVLTASDTSTHGGFSVLRKHATECLPVLDMSQPTPTQELVAKD 170
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG+NGEL VGVR LARQ
Sbjct: 171 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGDNGELRVGVRRLARQ 230
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAV 240
SSMPSSVISSQSMHLGVLATASHAVATQT+FVVYYKPRTSQFII +NKYLEA++ KF+V
Sbjct: 231 ASSMPSSVISSQSMHLGVLATASHAVATQTLFVVYYKPRTSQFIIGVNKYLEAMDKKFSV 290
Query: 241 GMRYKMRFEGEDSPE--RRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSP 298
GMR+KMRFEG+DS E +RFSGT+VGVED SPHW +SKWRSLKVQWDEPA++ RPDRVSP
Sbjct: 291 GMRFKMRFEGDDSAETDKRFSGTIVGVEDISPHWVNSKWRSLKVQWDEPAAVPRPDRVSP 350
Query: 299 WEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVT 358
WEIEPFVASA+ VQP + K KRPR E P +D S AS W A L Q+ ++ Q +V
Sbjct: 351 WEIEPFVASASTPSVQPTMVKTKRPRPPSETPDVDTTSVASVFWDAGLQQA-DMAQKNVL 409
Query: 359 AEDKRIDNHVAWHHKHSDFSSNS---NFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKN 415
AE K DN WHH +D +S S N M R Q++G WL+SP LFQ+ DD+K
Sbjct: 410 AESKWNDNTGTWHHMQTDMNSKSNSGNTMLRNQTEGSWLSSPHSSCPSHLFQDVTDDSKI 469
Query: 416 ISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEK-- 473
+SAWP S PH SK NND +L+QV+ K ET TS RLFGI+LI+ + +S EK
Sbjct: 470 VSAWPV----SKPHSSKLNNDHVLDQVDKESKVETATSYRLFGIDLIDPSRNSPSVEKAS 525
Query: 474 ---VPVSSLTTEGHIISTISAAADSDGKSDIA-KEFKEKKQEQVQVSPKESQSKQSCLTS 529
V V +TTEG ST+S D+ KSD++ E+KQEQ+QVSPK++QSKQ C
Sbjct: 526 AQAVNVPKVTTEG-CTSTLS-RTDAGHKSDVSMASSMERKQEQLQVSPKDTQSKQIC--- 580
Query: 530 NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDM 589
RSRTKVQMQGVAVGRA+DLT L GY LI+ELE+MF+IKGQL R KWEIV+TDDEGDM
Sbjct: 581 -RSRTKVQMQGVAVGRAVDLTMLDGYGQLINELEDMFNIKGQLQHRNKWEIVFTDDEGDM 639
Query: 590 MLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGEDILLSSDSAE 642
MLVGDDPW EFCNMV+RIFICSSQDVKKMS GSKLP+ S+E + ++SSD+ E
Sbjct: 640 MLVGDDPWPEFCNMVRRIFICSSQDVKKMSCGSKLPISSVE-DGTVISSDTTE 691
>gi|357469307|ref|XP_003604938.1| Auxin response factor [Medicago truncatula]
gi|355505993|gb|AES87135.1| Auxin response factor [Medicago truncatula]
Length = 666
Score = 849 bits (2194), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/650 (68%), Positives = 512/650 (78%), Gaps = 36/650 (5%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
MEQLEASTNQELNQRIP+ +LP+KILCR+VNIHL+AEQETDEVYAQITL+PE +QNEPT
Sbjct: 46 MEQLEASTNQELNQRIPVLKLPTKILCRIVNIHLLAEQETDEVYAQITLVPESNQNEPTI 105
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
PDP + PRPK+HSF K+LTASDTSTHGGFSVLRKHATECLPPLDM+Q TPTQELVAKD
Sbjct: 106 PDPPTEELPRPKIHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMSQPTPTQELVAKD 165
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFL GENGEL VGVR LARQ
Sbjct: 166 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFL-GENGELRVGVRRLARQ 224
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAV 240
SSMPSSVISSQSMHLGVLATASHAVATQT+FVVYYKPRTSQFI+S+NKYL AV+NKFAV
Sbjct: 225 SSSMPSSVISSQSMHLGVLATASHAVATQTLFVVYYKPRTSQFIVSVNKYLSAVSNKFAV 284
Query: 241 GMRYKMRFEGEDSPE--RRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSP 298
GMR++MRFE +DS E +RFSGT+VGVED SPHW +SKWRSLKVQWDEP++ITRPDRVSP
Sbjct: 285 GMRFRMRFESDDSAESDKRFSGTIVGVEDISPHWANSKWRSLKVQWDEPSAITRPDRVSP 344
Query: 299 WEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVT 358
WEIEPFV+SA+ VQP AK KRPR + E+P +D SAAS W AR++Q+ ++TQ
Sbjct: 345 WEIEPFVSSASTATVQPTAAKTKRPRPTSEIPDVDTTSAASIFWDARMSQT-DMTQ---- 399
Query: 359 AEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISA 418
RI N +N+N R Q++G WL+SPR + L + DD K++SA
Sbjct: 400 ----RIMNS----------KTNNNATLRNQTEGSWLSSPRSSYPSHLLHDTTDDGKSVSA 445
Query: 419 WPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSS 478
WP S P S N D +L+QVE K ET T+ RLFGI+LI+H+ SA E +P SS
Sbjct: 446 WPV----SQPQSSILNIDRMLDQVEKDNKVETATTYRLFGIDLIDHSKKSAAVE-IP-SS 499
Query: 479 LTTEGHIISTISAAADSDG-----KSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSR 533
G+ ++T +++ KSDI+K E+KQE QVSPKE+QSKQ C +RSR
Sbjct: 500 HAVNGNGVTTEVSSSTLSSSDTARKSDISKASFERKQEPQQVSPKETQSKQIC---SRSR 556
Query: 534 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVG 593
TKVQMQGVAVGRA+DL TL GYD LI ELEE+FDIKGQL R WEIV+TDDEGDMMLVG
Sbjct: 557 TKVQMQGVAVGRAVDLATLNGYDQLIGELEELFDIKGQLQHRNTWEIVFTDDEGDMMLVG 616
Query: 594 DDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGEDILLSSDSAEK 643
DDPW EFCNMV+RIFICSSQDVKKM GSKLP+ S E ++SSD+ E+
Sbjct: 617 DDPWPEFCNMVRRIFICSSQDVKKMKSGSKLPISSSIEEGTVISSDTTER 666
>gi|356520917|ref|XP_003529106.1| PREDICTED: auxin response factor 9-like [Glycine max]
Length = 664
Score = 830 bits (2144), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/646 (67%), Positives = 504/646 (78%), Gaps = 31/646 (4%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
MEQLE STNQELNQRIPLF+L SKILCRVVN+HL+AEQETDEVYAQITL+PE +Q EPT+
Sbjct: 45 MEQLEVSTNQELNQRIPLFKLSSKILCRVVNVHLLAEQETDEVYAQITLVPESNQTEPTS 104
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
PDPCPA+ PRP+VHSF KVLTASDTSTHGGFSVLRKHATECLP LDM++STPTQELVAKD
Sbjct: 105 PDPCPAELPRPRVHSFCKVLTASDTSTHGGFSVLRKHATECLPALDMSKSTPTQELVAKD 164
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
L G+EWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG NGEL VGVR +A
Sbjct: 165 LQGFEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGNNGELRVGVRRIAPL 224
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAV 240
QSSMPSSVISSQSMHLGVLATASHAVATQT+FVVYYKPRTSQFI+S+NKYLEA+N K V
Sbjct: 225 QSSMPSSVISSQSMHLGVLATASHAVATQTLFVVYYKPRTSQFIVSVNKYLEAINQKCNV 284
Query: 241 GMRYKMRFEGEDSPE--RRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSP 298
GMR+KMRFEG++SPE +RFSGT++GVED SPHW +S WRSLKVQWDEPAS RPDRVS
Sbjct: 285 GMRFKMRFEGDESPENDKRFSGTILGVEDISPHWVNSNWRSLKVQWDEPASFPRPDRVSS 344
Query: 299 WEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPL-DLPSAASAPWSARLAQSHNLTQLSV 357
WEIE +A QP + KNKRPR + EVP L D P AA W A L Q ++TQL V
Sbjct: 345 WEIEHILACVPTTSSQPAVIKNKRPRQASEVPDLGDTPLAAPTFWDAGLTQC-DMTQLRV 403
Query: 358 TAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNIS 417
E KR D+ + H +H + SN+N +S Q++ WL+SP QL+Q+ DDNK+I
Sbjct: 404 MTESKRSDS--SSHMRHHNSKSNNNGISMNQTEASWLSSP------QLYQDTTDDNKSIL 455
Query: 418 AWPAHSGHSTPHPSKPNNDTLLEQVETG-RKTETGTSCRLFGIELINHATSSAPSEKVPV 476
AWP S PH + NND L+QV+ K E TS RLFGI+LI+HA +
Sbjct: 456 AWPI----SKPHSERLNNDHFLDQVDKNINKVEAATSYRLFGIDLIDHARN--------- 502
Query: 477 SSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKV 536
+SL+ E D + +SD++K KE QEQ+ VSPKE+QSKQ C +RS TKV
Sbjct: 503 NSLSVENASGVASECKTDVNHESDLSKASKEWNQEQLLVSPKETQSKQVC---SRSCTKV 559
Query: 537 QMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDP 596
QMQGVAVGRA+DLTTL GYD L+DELE+MFDIKGQL R KWE V+TDDEGDMMLVGDDP
Sbjct: 560 QMQGVAVGRAVDLTTLDGYDQLVDELEKMFDIKGQLQHRNKWETVFTDDEGDMMLVGDDP 619
Query: 597 WHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGEDILLSSDSAE 642
W EFCNMVKRIFICSSQDV K+S GSKLP+ S+ GE I++S ++ E
Sbjct: 620 WPEFCNMVKRIFICSSQDVHKLSSGSKLPISSM-GE-IVISLNTTE 663
>gi|359489584|ref|XP_002264072.2| PREDICTED: auxin response factor 18-like [Vitis vinifera]
Length = 764
Score = 824 bits (2129), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/653 (63%), Positives = 495/653 (75%), Gaps = 20/653 (3%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
MEQL+ASTNQ ++QRIPLF LPSKILCRVV+ L+AEQETDEVYAQITL PE Q EP +
Sbjct: 113 MEQLQASTNQGVDQRIPLFNLPSKILCRVVHTRLLAEQETDEVYAQITLQPEADQTEPKS 172
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
PD CP ++P+ VHSF K+LTASDTSTHGGFSVLRKHA ECLPPLDM+Q+TPTQELVA+D
Sbjct: 173 PDSCPDEAPKQTVHSFCKILTASDTSTHGGFSVLRKHANECLPPLDMSQATPTQELVARD 232
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGD FVFLRG+NGEL VGVR LARQ
Sbjct: 233 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGDNGELRVGVRRLARQ 292
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAV 240
QS MPSSVISSQSMHLGVLATASHAV TQT+FVVYYKPRTSQFIISLNKYLEAVN FAV
Sbjct: 293 QSPMPSSVISSQSMHLGVLATASHAVTTQTLFVVYYKPRTSQFIISLNKYLEAVNYGFAV 352
Query: 241 GMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWE 300
GMR+KMRFEGEDSPERRF+GT+VG+ D SP W +SKWRSLK+QWDEPA+I RP+RVS W+
Sbjct: 353 GMRFKMRFEGEDSPERRFTGTIVGIGDISPQWSNSKWRSLKIQWDEPATIQRPERVSSWD 412
Query: 301 IEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSA----ASAP---WSARLAQSHNLT 353
IEPFVASA+ NL QP + K KRPR PLDLP A +S P W A + SH LT
Sbjct: 413 IEPFVASASLNLTQPPV-KIKRPR------PLDLPVAENTSSSVPSPFWYAGSSPSHELT 465
Query: 354 QLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQS-----DGEWLTSPRVKFSQQLFQE 408
QL E + ++ V W K + + N S S +G W +SP V S LFQ+
Sbjct: 466 QLGGVTEVQSSESQVHWPPKPKEINGNVIHNSNCGSSIGRPEGIWSSSPSVNVSLNLFQD 525
Query: 409 AIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSS 468
+D+K +S SG++T S+PNN + +QVE G++ E CRLFGI+L N++ ++
Sbjct: 526 LTEDSKTVSTRSILSGYNTSLSSRPNNGLISDQVEKGKRIEASIGCRLFGIDLTNNSKAT 585
Query: 469 APSE-KVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCL 527
A E P + ++ IS + + AD D++K E+KQ + S KE+Q +QSC
Sbjct: 586 ALLEMSCPSITSSSVKGPISAVVSEADRIQNLDVSKSSNEQKQVVPEASQKETQGRQSCT 645
Query: 528 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEG 587
S+R+RTKVQMQGVAVGRA+DLT L GYD LI ELE+MF+IKG+L R KWE+V+TDDEG
Sbjct: 646 PSSRTRTKVQMQGVAVGRAVDLTALEGYDELISELEKMFEIKGELCPRNKWEVVFTDDEG 705
Query: 588 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGEDILLSSDS 640
DMMLVGDDPW EFC MV++IFI SS++VKKMSP KL S++GE ++S DS
Sbjct: 706 DMMLVGDDPWQEFCKMVRKIFIYSSEEVKKMSPRCKLSTSSLDGEGTVISLDS 758
>gi|356567961|ref|XP_003552183.1| PREDICTED: auxin response factor 9-like [Glycine max]
Length = 664
Score = 817 bits (2111), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/647 (67%), Positives = 502/647 (77%), Gaps = 32/647 (4%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
MEQLE STNQELNQRIPLF+LPSKILCRVVN+HL+AEQETDEVYAQITL+PE +Q EP +
Sbjct: 44 MEQLEVSTNQELNQRIPLFKLPSKILCRVVNVHLLAEQETDEVYAQITLVPESNQAEPMS 103
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
PDPCPA+ P P+VHSF KVLTASDTSTHGGFSVLRKHATECLP LDM++STPTQELVAKD
Sbjct: 104 PDPCPAELPSPRVHSFCKVLTASDTSTHGGFSVLRKHATECLPALDMSKSTPTQELVAKD 163
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
L GYEWRFKHIFRGQPRRHLLTTGWS FVTSKRLVAGDTFVFLRG NGEL VGVR +A
Sbjct: 164 LQGYEWRFKHIFRGQPRRHLLTTGWSNFVTSKRLVAGDTFVFLRGNNGELRVGVRRIAPV 223
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAV 240
QSSMPSSVISSQSMHLGVLATASHAVATQT+FVVYYKPR SQFI+S+NKYLEA+N K V
Sbjct: 224 QSSMPSSVISSQSMHLGVLATASHAVATQTLFVVYYKPRASQFIVSVNKYLEAINQKCNV 283
Query: 241 GMRYKMRFEGEDSPE--RRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSP 298
GMR+K RFEG++SPE +RFSGT+VGVED SPHW +S WRSLKVQWDEPAS RPDRV P
Sbjct: 284 GMRFKTRFEGDESPENYKRFSGTIVGVEDISPHWVNSNWRSLKVQWDEPASFPRPDRVLP 343
Query: 299 WEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPL-DLPSAASAPWSARLAQSHNLTQLSV 357
WEIEP +AS Q KNKRPR + E+ L D P A W A L QS ++ +LSV
Sbjct: 344 WEIEPILASVPTTSSQTAAIKNKRPRQASELADLGDTPLAFPTFWDAGLTQS-DMAKLSV 402
Query: 358 TAEDKRIDNHV-AWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNI 416
AE KR D+ WHH + S++N +S Q++ WL+SP QL+ + DD+K+I
Sbjct: 403 MAEIKRSDSSSHMWHH---NSKSSNNGISMNQTEASWLSSP-----SQLYHDTTDDSKSI 454
Query: 417 SAWPAHSGHSTPHPSKPNNDTLLEQVETG-RKTETGTSCRLFGIELINHATSSAPSEKVP 475
SAWP S PH + NND L+QV+ K E TS RLFGI+LI+HA +++ S +
Sbjct: 455 SAWPI----SKPHSERLNNDHFLDQVDKEINKVEAATSYRLFGIDLIDHARNNSLSAE-N 509
Query: 476 VSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTK 535
S +T+E I D + SDI+K KE QEQ+Q+SPKE+QSKQ C +RS TK
Sbjct: 510 ASGITSECKI--------DVNHVSDISKASKEWNQEQLQLSPKETQSKQVC---SRSCTK 558
Query: 536 VQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDD 595
VQMQGVAVGRA+DLTTL GYD L+DELE+MFDIKGQL R KWEIV+TDDEGDMMLVGDD
Sbjct: 559 VQMQGVAVGRAVDLTTLDGYDQLVDELEKMFDIKGQLQLRNKWEIVFTDDEGDMMLVGDD 618
Query: 596 PWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGEDILLSSDSAE 642
PW EFC MV+RIFI SSQDV K+S GSKLP+ S+ E+I+ S D+ E
Sbjct: 619 PWLEFCKMVRRIFIYSSQDVHKLSSGSKLPISSM--EEIVTSLDTTE 663
>gi|449533118|ref|XP_004173524.1| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 9-like,
partial [Cucumis sativus]
Length = 669
Score = 784 bits (2024), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/655 (64%), Positives = 498/655 (76%), Gaps = 27/655 (4%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
MEQLEASTNQELNQ++PLF LP KILC+VV+ L+AEQ++DEVYAQITL+PE +Q P+T
Sbjct: 28 MEQLEASTNQELNQKLPLFNLPXKILCQVVDTRLLAEQDSDEVYAQITLMPEANQALPST 87
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
+P + + KVHSF KVLTASDTSTHGGFSVLRKHATECLPPLDM Q TPTQELVAKD
Sbjct: 88 FEPPLIECRKTKVHSFCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKD 147
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGD+FVFLRGENGEL VGVR LARQ
Sbjct: 148 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVRRLARQ 207
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAV 240
QSSMPSSVISS SMHLGVLATASHAV+TQT FVVYYKPR SQFI+SL+KY+EA+NNKF V
Sbjct: 208 QSSMPSSVISSHSMHLGVLATASHAVSTQTRFVVYYKPRASQFIVSLSKYMEAMNNKFMV 267
Query: 241 GMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWE 300
GMR+KMRFEGE+SPERRFSGT+VGV+D SPHW +S+WRSL+VQWDE ASI RPDRVSPWE
Sbjct: 268 GMRFKMRFEGEESPERRFSGTIVGVDDMSPHWPNSEWRSLRVQWDELASIQRPDRVSPWE 327
Query: 301 IEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARL---AQSH-NLTQLS 356
IEPFVA TP++ + KNKRPR PPL++P + ++ + + SH + TQLS
Sbjct: 328 IEPFVA-PTPSIPHSISVKNKRPR-----PPLEIPDSDNSTVTTLRHPGSTSHDDRTQLS 381
Query: 357 VT-AEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKN 415
V+ AE KR +NH WH+K +D N N +SRT +G WL S SQ Q+ IDD K+
Sbjct: 382 VSAAELKRFENHATWHYKQTDAGGNGNSVSRTAMEGSWLASSSGCVSQHRLQDLIDDRKS 441
Query: 416 ISAW--------PAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATS 467
S W AHS TP S +D + + E G+K E SCRLFGIELINH+ S
Sbjct: 442 GSVWSTVFPGQLAAHSTCPTPRSSNTKSDQVQDLGEKGKKAEASPSCRLFGIELINHSKS 501
Query: 468 SAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCL 527
+E+ +T I +++ S++ K KE+K +QV PKE Q KQ+
Sbjct: 502 PVLTERAADQPNSTPNEI-------TEAEQNSNLPKISKERKLGLLQVPPKEIQHKQNSS 554
Query: 528 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEG 587
TS+RSRTKVQMQG+AVGRA+DLTTL GY LIDELE+MFDIKG+L R KWEIV+TDDEG
Sbjct: 555 TSSRSRTKVQMQGMAVGRAVDLTTLEGYGQLIDELEKMFDIKGELRPRNKWEIVFTDDEG 614
Query: 588 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGEDILLSSDSAE 642
DMML+GD PW EFCNMV+RI+I SSQDV KM SKL M ++E E +++S+SA+
Sbjct: 615 DMMLMGDYPWQEFCNMVRRIYIWSSQDV-KMGSVSKLAMSALECEGTVITSESAD 668
>gi|449462567|ref|XP_004149012.1| PREDICTED: auxin response factor 9-like [Cucumis sativus]
Length = 641
Score = 778 bits (2009), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/652 (64%), Positives = 495/652 (75%), Gaps = 27/652 (4%)
Query: 4 LEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDP 63
LEASTNQELNQ++PLF LP KILC+VV+ L+AEQ++DEVYAQITL+PE +Q P+T +P
Sbjct: 3 LEASTNQELNQKLPLFNLPPKILCQVVDTRLLAEQDSDEVYAQITLMPEANQALPSTFEP 62
Query: 64 CPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHG 123
+ + KVHSF KVLTASDTSTHGGFSVLRKHATECLPPLDM Q TPTQELVAKDLHG
Sbjct: 63 PLIECRKTKVHSFCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHG 122
Query: 124 YEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSS 183
YEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGD+FVFLRGENGEL VGVR LARQQSS
Sbjct: 123 YEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVRRLARQQSS 182
Query: 184 MPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMR 243
MPSSVISS SMHLGVLATASHAV+TQT FVVYYKPR SQFI+SL+KY+EA+NNKF VGMR
Sbjct: 183 MPSSVISSHSMHLGVLATASHAVSTQTRFVVYYKPRASQFIVSLSKYMEAMNNKFMVGMR 242
Query: 244 YKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEP 303
+KMRFEGE+SPERRFSGT+VGV+D SPHW +S+WRSL+VQWDE ASI RPDRVSPWEIEP
Sbjct: 243 FKMRFEGEESPERRFSGTIVGVDDMSPHWPNSEWRSLRVQWDELASIQRPDRVSPWEIEP 302
Query: 304 FVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARL---AQSH-NLTQLSVT- 358
FVA TP++ + KNKRPR PPL++P + ++ + + SH + TQLSV+
Sbjct: 303 FVA-PTPSIPHSISVKNKRPR-----PPLEIPDSDNSTVTTLRHPGSTSHDDRTQLSVSA 356
Query: 359 AEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISA 418
AE KR +NH WH+K +D N N +SRT +G WL S SQ Q+ IDD K+ S
Sbjct: 357 AELKRFENHATWHYKQTDAGGNGNSVSRTAMEGSWLASSSGCVSQHRLQDLIDDRKSGSV 416
Query: 419 W--------PAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAP 470
W AHS TP S +D + + E G+K E SCRLFGIELINH+ S
Sbjct: 417 WSTVFPGQLAAHSTCPTPRSSNTKSDQVQDLGEKGKKAEASPSCRLFGIELINHSKSPVL 476
Query: 471 SEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSN 530
+E+ +T I +++ S++ K KE+K +QV PKE Q KQ+ TS+
Sbjct: 477 TERAADQPNSTPNEI-------TEAEQNSNLPKISKERKLGLLQVPPKEIQHKQNSSTSS 529
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMM 590
RSRTKVQMQG+AVGRA+DLTTL GY LIDELE+MFDIKG+L R KWEIV+TDDEGDMM
Sbjct: 530 RSRTKVQMQGMAVGRAVDLTTLEGYGQLIDELEKMFDIKGELRPRNKWEIVFTDDEGDMM 589
Query: 591 LVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGEDILLSSDSAE 642
L+GD PW EFCNMV+RI+I SSQDV KM SKL M ++E E +++S+SA+
Sbjct: 590 LMGDYPWQEFCNMVRRIYIWSSQDV-KMGSVSKLAMSALECEGTVITSESAD 640
>gi|255564663|ref|XP_002523326.1| Auxin response factor, putative [Ricinus communis]
gi|223537414|gb|EEF39042.1| Auxin response factor, putative [Ricinus communis]
Length = 667
Score = 774 bits (1999), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/643 (62%), Positives = 467/643 (72%), Gaps = 46/643 (7%)
Query: 3 QLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPD 62
QLEASTNQEL Q+IP F LPSKILCRVV+IHL+AEQETDEVYAQITL PE Q EPT+PD
Sbjct: 66 QLEASTNQELTQQIPKFNLPSKILCRVVHIHLLAEQETDEVYAQITLHPEVDQTEPTSPD 125
Query: 63 PCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLH 122
C + + VHSF K+LTASDTSTHGGFSVLRKHATECLPPLDMNQS PTQELVAKDLH
Sbjct: 126 QCTPEPQKRPVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMNQSIPTQELVAKDLH 185
Query: 123 GYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQS 182
GYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGD FVFLR +NGEL VGVR LARQQS
Sbjct: 186 GYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRSDNGELRVGVRRLARQQS 245
Query: 183 SMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGM 242
MPSSVISSQSMHLGVLATASHAV TQT+FVVYYKPRTSQFII LNKYLEAVN+ F++GM
Sbjct: 246 PMPSSVISSQSMHLGVLATASHAVTTQTLFVVYYKPRTSQFIIGLNKYLEAVNHGFSLGM 305
Query: 243 RYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 302
R+KMRFEGEDSPERRF GT+VGV DFSP W SKWRSLK+QWDEPA++ RPDRVSPWEIE
Sbjct: 306 RFKMRFEGEDSPERRFMGTIVGVGDFSPEWSGSKWRSLKIQWDEPATVQRPDRVSPWEIE 365
Query: 303 PFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDK 362
PF ASA+ NL Q V K+KRPR P+D TA D
Sbjct: 366 PFAASASVNLPQTV-GKSKRPR------PVD-----------------------TTASDN 395
Query: 363 RIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAH 422
+ N S+ SR +S+G W SP + S LF ++ DDN+ I+
Sbjct: 396 CLLN-------------GSSCSSRVRSEGIWPHSPHMDVSLSLFSDSADDNRTITTQSVI 442
Query: 423 SGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVS-SLTT 481
SG++ PS+ +N + EQVE G+K E CRLFGI+LI++++++AP EK + + +
Sbjct: 443 SGYAPAFPSRQSNSLVHEQVEKGKKYENSVGCRLFGIDLISNSSTAAPPEKESLGLKMDS 502
Query: 482 EGHIISTISA-AADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQG 540
G S + D D++K KE+K+ +V PKE+ SK TS R+RTKVQMQG
Sbjct: 503 NGPRGSAPAVDGTDEAQNVDVSKASKEQKEAASEVMPKETHSKPGT-TSTRTRTKVQMQG 561
Query: 541 VAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEF 600
VAVGRA+DLT L GY LI ELEE+F+IKG+L TR KW +V+TDDEGDMMLVGDDPW EF
Sbjct: 562 VAVGRAVDLTALKGYGDLIKELEELFEIKGELSTREKWAVVFTDDEGDMMLVGDDPWREF 621
Query: 601 CNMVKRIFICSSQDVKKMSPGSKLPMFSIEGEDILLSSDSAEK 643
C MV++I I SS++ KK+ KL S+EGE + S DS +
Sbjct: 622 CKMVRKILIYSSEEAKKLKTRCKLLASSLEGEGAIASLDSEHR 664
>gi|449452410|ref|XP_004143952.1| PREDICTED: auxin response factor 9-like [Cucumis sativus]
Length = 688
Score = 761 bits (1965), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/633 (63%), Positives = 475/633 (75%), Gaps = 13/633 (2%)
Query: 5 EASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPC 64
+ASTN ELN+RIPLF L SKILCRV++I +A+ E+DEVYAQITL+PE +QNEP + DPC
Sbjct: 55 QASTNLELNKRIPLFNLDSKILCRVIHIEPLADHESDEVYAQITLMPESNQNEPKSMDPC 114
Query: 65 PADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGY 124
P + PRP VHSF KVLTASDTSTHGGFSVLRKHATECLPPLDM +TPTQ+LVAKDLHGY
Sbjct: 115 PPEPPRPVVHSFCKVLTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQDLVAKDLHGY 174
Query: 125 EWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSM 184
EWRFKHIFRGQPRRHLLTTGWSTFVTSKRL AGD+FVFLRG+NGEL VGVR ARQQSSM
Sbjct: 175 EWRFKHIFRGQPRRHLLTTGWSTFVTSKRLSAGDSFVFLRGDNGELRVGVRRRARQQSSM 234
Query: 185 PSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRY 244
P SVISSQSMHLGVLATASHAV TQT FVVYYKPRT QFIISLNKYLEAVNNKF+VGMR+
Sbjct: 235 PPSVISSQSMHLGVLATASHAVTTQTRFVVYYKPRTCQFIISLNKYLEAVNNKFSVGMRF 294
Query: 245 KMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 304
M FEGEDSPERRFSGT++G D SPHW +S WRSL+VQWDE SI RPDRVSPW+IEP
Sbjct: 295 NMSFEGEDSPERRFSGTIIGAVDISPHWPNSSWRSLRVQWDEQTSILRPDRVSPWDIEPL 354
Query: 305 VASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAP--WSARLAQSHNLTQLSVTAEDK 362
+SA L QP+ +KNKRPR + P + + P W + LAQSH+ Q S AE +
Sbjct: 355 TSSAVTGLSQPI-SKNKRPR---QPTPAHDGADLTKPTHWDSGLAQSHDGKQCSNAAEGR 410
Query: 363 RIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNI--SAWP 420
+ +N+ + HH+ +D SNS+ +SRTQ+D WL+ + + + D+K + S W
Sbjct: 411 KGENNESCHHRETDTISNSSCVSRTQTD-TWLSPTQSNSYKHPVNDMAQDSKTVPSSGWT 469
Query: 421 AHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLT 480
G T H K ++D +L+ +E+G+K ET SCRLFGI+L NH + S + S
Sbjct: 470 FLLGTPTSHLVKLSDDQILDPIESGKKGETVASCRLFGIDL-NHLAAEKASSQPSSGSSD 528
Query: 481 TEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQG 540
T+G IST+S A SD KSD + E+K E Q S KE Q QS + RSRTKV M G
Sbjct: 529 TDGR-ISTLS-VAQSDPKSDNLEVSIERKSELSQASLKEIQCNQSSSANTRSRTKVLMHG 586
Query: 541 VAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEF 600
+AVGRA+DLT L GYD LIDELE+MFD++GQL R KWEIVYTDDEGDMMLVGDDPW EF
Sbjct: 587 MAVGRAVDLTILEGYDQLIDELEKMFDVRGQLCARDKWEIVYTDDEGDMMLVGDDPWEEF 646
Query: 601 CNMVKRIFICSSQDVKKMSPGSK-LPMFSIEGE 632
NMV+RIFICS + VK MS GSK L +EG+
Sbjct: 647 RNMVRRIFICSKEQVKNMSSGSKQLTSIEVEGD 679
>gi|302398561|gb|ADL36575.1| ARF domain class transcription factor [Malus x domestica]
Length = 695
Score = 751 bits (1939), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/620 (61%), Positives = 469/620 (75%), Gaps = 4/620 (0%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
MEQLE+STNQELNQ+IPLF LPSKILC VV+I L+AEQETDEVYAQITL PE Q EP++
Sbjct: 52 MEQLESSTNQELNQQIPLFNLPSKILCSVVHIRLLAEQETDEVYAQITLHPEADQCEPSS 111
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
PDPC ++P+ VH F K+LTASDTSTHGGFSVLRKHATECLPPLDMNQ+TPTQEL+AKD
Sbjct: 112 PDPCKPEAPKATVHWFCKILTASDTSTHGGFSVLRKHATECLPPLDMNQATPTQELIAKD 171
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
LHGYEW+FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGD FVFLRG+NGEL GVR LARQ
Sbjct: 172 LHGYEWKFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGDNGELRAGVRRLARQ 231
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAV 240
QS +PSSVISSQSMHLGVLATASHA+ T+T+FVVY KPRTSQFII L+KYLEA KF++
Sbjct: 232 QSQIPSSVISSQSMHLGVLATASHALMTKTLFVVYSKPRTSQFIIGLSKYLEATKTKFSL 291
Query: 241 GMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWE 300
G R++MRFEG++SPERRF+GT+V V D SP W +SKWRSLKVQWDE A++ RPDRVSPW+
Sbjct: 292 GTRFRMRFEGDESPERRFTGTIVEVGDLSPQWSESKWRSLKVQWDEHAAVQRPDRVSPWD 351
Query: 301 IEPFVASATPNLVQPVLAKNKRPR-LSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTA 359
IEPFVASA NL QP + K+KRPR + + + SAAS+ W Q+ L + V
Sbjct: 352 IEPFVASAPSNLAQP-MVKSKRPRPVEISSSEVTTNSAASSFWYHSSPQTTELNRGGV-P 409
Query: 360 EDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAW 419
E + + V W + + +S+S +R S+G W +SP V LF+++ + +KN+ A
Sbjct: 410 EVQTSGSQVVWPLRQKESNSSSYSSARVCSEGIWPSSPHVDVPLSLFRDSKESSKNVIAG 469
Query: 420 PAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSL 479
S ++P SKPNN + +QVE G+K+++ + LFG L N+ ++ P E PV
Sbjct: 470 SVLSSIASPILSKPNNVLIHDQVEKGKKSDS-SGFWLFGCNLSNNTKTTCPQEIEPVFKT 528
Query: 480 TTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQ 539
G + A +SD D++K KE+KQ ++ SPKE+Q KQ S R+RTKVQMQ
Sbjct: 529 MPSGAKGPIPADAFESDQGLDVSKLSKEQKQVILEASPKETQGKQGLTLSTRTRTKVQMQ 588
Query: 540 GVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHE 599
GVAVGRA+DLT L GYDHLIDELE+MF+IKG+L + KW +V+TDDE DMML+GDD W +
Sbjct: 589 GVAVGRAVDLTALKGYDHLIDELEKMFEIKGELRPKNKWAVVFTDDENDMMLMGDDQWPD 648
Query: 600 FCNMVKRIFICSSQDVKKMS 619
FC +VK+IFI SS +V+KM+
Sbjct: 649 FCKLVKKIFIYSSDEVQKMN 668
>gi|356560266|ref|XP_003548414.1| PREDICTED: auxin response factor 7-like [Glycine max]
Length = 799
Score = 746 bits (1926), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/662 (59%), Positives = 482/662 (72%), Gaps = 32/662 (4%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
MEQL+AST+QELNQ IP F LP+KI CRVVNI L+AEQ+TDEVYA I LLPE Q EPT
Sbjct: 142 MEQLQASTDQELNQEIPHFNLPAKIFCRVVNIQLLAEQDTDEVYACIALLPESDQTEPTN 201
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
PDP ++ P+ K HSF K+LTASDTSTHGGFSVLRKHATECLP LDM Q+TPTQEL AKD
Sbjct: 202 PDPNISEPPKQKFHSFCKILTASDTSTHGGFSVLRKHATECLPALDMTQATPTQELAAKD 261
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
LHG+EW+FKHI+RGQPRRHLLTTGWSTFV SKRLVAGD FVFLRGE+G+L VGVR LARQ
Sbjct: 262 LHGFEWKFKHIYRGQPRRHLLTTGWSTFVASKRLVAGDAFVFLRGEHGQLRVGVRRLARQ 321
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAV 240
QS MPSSVISSQSMHLGVLATASHAV T+TMF+VYYKPRTSQFI+ LNKYLEAVNNKF++
Sbjct: 322 QSPMPSSVISSQSMHLGVLATASHAVMTRTMFLVYYKPRTSQFIVGLNKYLEAVNNKFSL 381
Query: 241 GMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWE 300
GMR+KMRFEG+DSPERRFSGT+VGV D S W +S+WRSLKVQWDEPA+I RPDRVS WE
Sbjct: 382 GMRFKMRFEGDDSPERRFSGTIVGVGDVSAGWSNSQWRSLKVQWDEPATIPRPDRVSCWE 441
Query: 301 IEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDL-PSAASAPWSARLAQSHNLTQL-SVT 358
IEPFVAS N+ QP + K KR R P D+ SAAS W S+ L+QL + T
Sbjct: 442 IEPFVASTALNVTQPAV-KGKRSR------PADVSSSAASGFWYH--GSSNELSQLGAAT 492
Query: 359 AEDKRIDNHVA-WHHKHSDF-------SSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAI 410
AE + +N V + D ++NS+ SR + +G W +SP + + LF +
Sbjct: 493 AEVQSKENQVVPCSLRQKDIINSNPIDANNSSISSRVRMEGVWPSSPHLNVTPNLFSDP- 551
Query: 411 DDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATS--- 467
+N ++ A SG+ PS+ ++ E VE G+K E C LFG+ L N+ ++
Sbjct: 552 -NNNSVLARSPISGYLNV-PSRSSDGPTCEHVEDGKKIENSLDCWLFGVNLTNNCSNVII 609
Query: 468 SAPSE---KVPV-SSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQV--QVSPKESQ 521
+ PSE + P+ SS+ G S +AA +++ K Q+Q+ + SP E Q
Sbjct: 610 TTPSERELRGPISSSVAPSGPKESIPAAACETERVQTPNYSLSNKGQKQIISEASPNEWQ 669
Query: 522 SKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIV 581
+KQ+ + S R+RTKVQMQGVAVGRA DLTTL GYD LI+ELE++F+I+G+LH++ KW +
Sbjct: 670 NKQATVPSMRTRTKVQMQGVAVGRAFDLTTLSGYDDLIEELEKLFEIRGELHSQDKWAVT 729
Query: 582 YTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGEDILLSSDSA 641
+TDDE DMMLVGDDPW EFCNMVKRIFICS +D+KKM KLP S E E++LLS DS
Sbjct: 730 FTDDENDMMLVGDDPWPEFCNMVKRIFICSREDLKKMK-CCKLPASSSEVEEVLLSPDSQ 788
Query: 642 EK 643
+
Sbjct: 789 NR 790
>gi|356522502|ref|XP_003529885.1| PREDICTED: auxin response factor 7-like [Glycine max]
Length = 722
Score = 744 bits (1920), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/661 (59%), Positives = 476/661 (72%), Gaps = 23/661 (3%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
MEQL+AST+QELNQ IP F LP+KI CRVVNI L+AEQ+TDEVYA I LLPE Q EPT
Sbjct: 58 MEQLQASTDQELNQEIPHFNLPAKIFCRVVNIQLLAEQDTDEVYACIALLPESDQTEPTN 117
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
PDP +++P+ K HSF K+LTASDTSTHGGFSVLRKHATECLP LDM QSTPTQEL AKD
Sbjct: 118 PDPNVSEAPKQKFHSFCKILTASDTSTHGGFSVLRKHATECLPELDMTQSTPTQELAAKD 177
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
LHG+EW+FKHI+RGQPRRHLLTTGWSTFV SKRLVAGD FVFLRGE+G+L VGVR LARQ
Sbjct: 178 LHGFEWKFKHIYRGQPRRHLLTTGWSTFVASKRLVAGDAFVFLRGEHGQLRVGVRRLARQ 237
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAV 240
QS MPSSVISSQSMHLGVLATASHAV T+TMF+VYYKPRTSQFI+ LNKYLEAVNNKF++
Sbjct: 238 QSPMPSSVISSQSMHLGVLATASHAVMTRTMFLVYYKPRTSQFIVGLNKYLEAVNNKFSL 297
Query: 241 GMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWE 300
MR+KMRFEG+DSPERRFSGT+VGV D S W +S+WRSLKVQWDEPA+I RPDRVS WE
Sbjct: 298 SMRFKMRFEGDDSPERRFSGTIVGVGDVSAGWSNSQWRSLKVQWDEPATIPRPDRVSCWE 357
Query: 301 IEPFVASATPNLVQP-VLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTA 359
IEPFVAS N+ QP V K RP + + SAAS W S+ L+QL A
Sbjct: 358 IEPFVASTALNVTQPAVKGKRSRPADVLSSGSI-FNSAASGFWYH--GSSNELSQLGAAA 414
Query: 360 EDKRIDNHVA-WHHKHSDF-------SSNSNFMSRTQSDGEWLTSPRVKFSQQLFQE--A 409
E + +N V + D ++NS+ +R + +G W +SP + + LF +
Sbjct: 415 EVQSKENQVVPCSLRQKDIINSNPINANNSSISTRVRMEGVWPSSPHLNATPNLFSDPNN 474
Query: 410 IDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATS-- 467
+ N +SA SG+ PS+ ++ + VE G+KTE C LFG+ L N+ ++
Sbjct: 475 NNSNNGVSARSLISGYPN-VPSRSSDGPTCDGVEDGKKTENSLDCWLFGVNLTNNCSNVI 533
Query: 468 SAPSE---KVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQV--QVSPKESQS 522
+ PSE + P SS+ G S +AA +++ K Q+Q+ + SP + Q+
Sbjct: 534 TTPSEREQRGPSSSVVLSGPKESIPAAACETERVQTPNYSLSNKGQKQIISEASPNQWQN 593
Query: 523 KQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVY 582
KQ+ + S R+RTKVQMQGVAVGRA DLTTL GYD LIDELE++F+I+G+L ++ KW + +
Sbjct: 594 KQATVLSMRTRTKVQMQGVAVGRAFDLTTLSGYDDLIDELEKLFEIRGELRSQDKWAVTF 653
Query: 583 TDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGEDILLSSDSAE 642
TDDE DMML GDDPW EFCNMVKRIFICS +D+KKM KLP S E E+ILLS DS
Sbjct: 654 TDDENDMMLAGDDPWPEFCNMVKRIFICSREDLKKMK-CCKLPASSSEVEEILLSPDSQN 712
Query: 643 K 643
+
Sbjct: 713 R 713
>gi|379323218|gb|AFD01308.1| auxin response factor 9 [Brassica rapa subsp. pekinensis]
Length = 629
Score = 731 bits (1888), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/627 (61%), Positives = 459/627 (73%), Gaps = 60/627 (9%)
Query: 1 MEQLEASTNQELNQ---RIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE 57
MEQLEAST Q+LN PLF LP KILCRV+++ L AE++TDEVYAQI L+PE + +E
Sbjct: 37 MEQLEASTQQDLNAVKPTKPLFDLPPKILCRVMDVRLQAEKDTDEVYAQIMLMPEGTVDE 96
Query: 58 PTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELV 117
P +PDP P +S RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDM Q TPTQELV
Sbjct: 97 PMSPDPSPPESQRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELV 156
Query: 118 AKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCL 177
A+D+HGY+W+FKHIFRGQPRRHLLTTGWSTFVT+KRLVAGDTFVFLRGENGEL VGVR
Sbjct: 157 AEDVHGYQWKFKHIFRGQPRRHLLTTGWSTFVTAKRLVAGDTFVFLRGENGELRVGVRRA 216
Query: 178 ARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNK 237
RQQ++MPSSVISS SMHLGVLATA HA T++MF VYYKPRTSQFIISLNKYLEA++NK
Sbjct: 217 NRQQTNMPSSVISSHSMHLGVLATACHATQTRSMFTVYYKPRTSQFIISLNKYLEAMSNK 276
Query: 238 FAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVS 297
F+VG+R+KMRFEGEDSPERRFSGTVVGV+D S HWKDS WR L+V WDEPASI+RPD+VS
Sbjct: 277 FSVGIRFKMRFEGEDSPERRFSGTVVGVKDCSTHWKDSNWRCLEVHWDEPASISRPDKVS 336
Query: 298 PWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSV 357
PWEIEPFV S N+ V+ KNKRPR EV L AS WS+ L QSH Q +
Sbjct: 337 PWEIEPFVTSE--NVPHSVMPKNKRPRHYSEVSALG--KTASNLWSSALTQSHEFAQSCI 392
Query: 358 TAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNIS 417
T++ SP QQ +++A +D KN S
Sbjct: 393 TSQR---------------------------------NSP-----QQCYRDATEDAKN-S 413
Query: 418 AWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVS 477
W A +P+ + NN + VE +K ET S RLFGI+L++ + + + P
Sbjct: 414 DWSA-----SPYSATLNNQMVFP-VEQ-KKPETTASYRLFGIDLLSSSIPATEEKTAPTL 466
Query: 478 SLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQ 537
+ I+ + ++SD KS+++K +EKKQE Q S KE QSK+ ++S RSRTKVQ
Sbjct: 467 PIN-----ITKPTPDSNSDPKSEVSKLSEEKKQEPAQASSKEVQSKE--ISSTRSRTKVQ 519
Query: 538 MQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPW 597
MQGV VGRA+DLT L GY LID+LE++FDI+G+L +R +WEIV+TDDEGDMMLVGDDPW
Sbjct: 520 MQGVPVGRAVDLTVLNGYSELIDDLEKLFDIEGELKSRNQWEIVFTDDEGDMMLVGDDPW 579
Query: 598 HEFCNMVKRIFICSSQDVKKMSPGSKL 624
EFCNMVKRIFI S ++VKKM+PG++L
Sbjct: 580 PEFCNMVKRIFIWSKEEVKKMTPGNQL 606
>gi|449443756|ref|XP_004139643.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
Length = 693
Score = 723 bits (1865), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/634 (60%), Positives = 463/634 (73%), Gaps = 17/634 (2%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
MEQLE STNQELN +IP F LP KILCRVVNI L+AE+ETDEVYAQITL PE Q+EP +
Sbjct: 50 MEQLEESTNQELNHQIPHFDLPPKILCRVVNIRLLAEKETDEVYAQITLYPEADQSEPQS 109
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
DP P + R VHSF K+LTASDTSTHGGFSVLRKHATECLPPLDM+QSTPTQEL AKD
Sbjct: 110 ADPEPPERTRQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMSQSTPTQELAAKD 169
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
LHGYEW+FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGD FVFLRG+NGEL VGVR ARQ
Sbjct: 170 LHGYEWKFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGDNGELRVGVRRQARQ 229
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAV 240
QS MPSSVISS SMHLGVLATASHAV TQT FVVYYKPRTSQFIISLNKYLE V N + V
Sbjct: 230 QSLMPSSVISSHSMHLGVLATASHAVRTQTYFVVYYKPRTSQFIISLNKYLETVKNGYEV 289
Query: 241 GMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWE 300
GMR+KMRFEGE+SPERRF+GT+VGV D SP W DSKWRSLK+QWDEPA+I RP+RVSPWE
Sbjct: 290 GMRFKMRFEGEESPERRFTGTIVGVGDMSPQWSDSKWRSLKIQWDEPATIQRPERVSPWE 349
Query: 301 IEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLP--SAASAPWSARLAQSHNLTQLSVT 358
IEPFV SA+ N P + K+KR R +E+PP ++ SA S W SH ++QLS T
Sbjct: 350 IEPFVPSASLNFTHPAI-KSKRAR-PVEIPPPEVTSGSAPSGFWLQGSTISHEISQLSGT 407
Query: 359 AEDKRIDNHVAWHHKHSDFSSNSNFMSRTQS-DGEWLTSPRVKFSQQLFQEAIDDNKNI- 416
E + +N V W SNS+ + + +G W SP + S L+ ++ + + +
Sbjct: 408 NEVQSSNNRVVWALGQRKLDSNSSHCNPVANVEGIW-PSPPLNISLNLYPDSTFERELVQ 466
Query: 417 SAWPAHSGHSTPHPSKPNNDTLL-EQVETGRKTETGTSCRLFGIELINHATSSAPSEK-- 473
P S +S+ SKP++D + +Q+E G K + CR+FGI+L N+ + E+
Sbjct: 467 QKHPLSSPYSSSVTSKPSSDLIQPDQLEKGSKPDISLGCRIFGIDLKNNCSIVPTLERRS 526
Query: 474 ---VPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSN 530
+ V+ E + + ++ D+ S +KE +Q ++ K +Q+K S+
Sbjct: 527 SCLMMVTDGAKEPVVTAVVTPQVDAGNLSQPSKE----QQLSTELLTKGTQTKHISNLSS 582
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMM 590
R+RTKVQMQGVAVGRA+DLTTL GY+ LIDELE +F+IKG+L KW IV+TDDE DMM
Sbjct: 583 RTRTKVQMQGVAVGRAVDLTTLEGYEDLIDELENVFEIKGELRGINKWSIVFTDDENDMM 642
Query: 591 LVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 624
LVGDDPW EFC MVKRIFICSS++VKKMS SK+
Sbjct: 643 LVGDDPWPEFCKMVKRIFICSSEEVKKMSRESKI 676
>gi|297803732|ref|XP_002869750.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297315586|gb|EFH46009.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 637
Score = 720 bits (1859), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/631 (62%), Positives = 472/631 (74%), Gaps = 55/631 (8%)
Query: 1 MEQLEASTNQ-ELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQ-NEP 58
MEQLEAST Q +LN PLF LP KILC V+N+ L AE++TDEVYAQITL+P ++ + P
Sbjct: 37 MEQLEASTQQVDLNTMKPLFVLPPKILCNVMNVSLQAEKDTDEVYAQITLIPVGTEVDGP 96
Query: 59 TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
T+PDP P + RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDM Q TPTQELVA
Sbjct: 97 TSPDPSPPELQRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVA 156
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
+D+HGY+W+FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGE GEL VGVR
Sbjct: 157 EDVHGYQWKFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGEKGELRVGVRRAN 216
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKF 238
RQQSSMPSSVISS SMHLGVLATA HA T+TMF+VYYKPRTSQFIISLNKYLEA++NKF
Sbjct: 217 RQQSSMPSSVISSHSMHLGVLATARHATQTKTMFIVYYKPRTSQFIISLNKYLEAMSNKF 276
Query: 239 AVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSP 298
+VGMR+KMRFEGEDSPERR+SGTV+GV D SPHWKDSKWR L+V WDEPASI+RP++VSP
Sbjct: 277 SVGMRFKMRFEGEDSPERRYSGTVIGVNDCSPHWKDSKWRCLEVHWDEPASISRPNKVSP 336
Query: 299 WEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPS-AASAPWSARLAQSHNLTQLSV 357
WEIEPFV S N+ + V+ KNKRPR EV LD+ AS WS+ L QSH Q +
Sbjct: 337 WEIEPFVTSE--NVPKSVMLKNKRPRQVSEVSALDVGGITASNLWSSVLTQSHEFAQSCI 394
Query: 358 TAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNIS 417
T++ W +SP QQ ++A +D K S
Sbjct: 395 TSQ--------------------------------W-SSP-----QQCHRDANEDAKK-S 415
Query: 418 AWPAHSGHSTPHPSKPN--NDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVP 475
W ++ +S + SK + ND ++ VE +K ET T+ RLFGI+L++ + +++ + P
Sbjct: 416 DW-INNSYSVSNVSKDSTLNDQMVSPVEQ-KKPETTTNYRLFGIDLMSSSLAASEEKTAP 473
Query: 476 VSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTK 535
+ + IS + + SD KS+I+K +EKKQE + SPKE QSKQS +S RSRTK
Sbjct: 474 MRPIN-----ISKPTMDSHSDPKSEISKVSEEKKQEPAEGSPKEVQSKQS--SSTRSRTK 526
Query: 536 VQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDD 595
VQMQGV VGRA+DLT L GY+ LID++E++FDIKG+L +R +WEIV+TDDEGDMMLVGDD
Sbjct: 527 VQMQGVPVGRAVDLTALKGYNELIDDIEKLFDIKGELQSRNQWEIVFTDDEGDMMLVGDD 586
Query: 596 PWHEFCNMVKRIFICSSQDVKKMSPGSKLPM 626
PW EFCNMVKRIFI S ++VKKM+PG++L M
Sbjct: 587 PWPEFCNMVKRIFIWSKEEVKKMTPGNQLRM 617
>gi|15233647|ref|NP_194129.1| auxin response factor 9 [Arabidopsis thaliana]
gi|46576670|sp|Q9XED8.1|ARFI_ARATH RecName: Full=Auxin response factor 9
gi|4580575|gb|AAD24427.1|AF082176_1 auxin response factor 9 [Arabidopsis thaliana]
gi|12744967|gb|AAK06863.1|AF344312_1 auxin response factor 9 [Arabidopsis thaliana]
gi|4972102|emb|CAB43898.1| auxin response factor 9 (ARF9) [Arabidopsis thaliana]
gi|7269247|emb|CAB81316.1| auxin response factor 9 (ARF9) [Arabidopsis thaliana]
gi|332659435|gb|AEE84835.1| auxin response factor 9 [Arabidopsis thaliana]
Length = 638
Score = 715 bits (1846), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/636 (61%), Positives = 470/636 (73%), Gaps = 54/636 (8%)
Query: 1 MEQLEASTNQ-ELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQ-NEP 58
MEQLEAST Q +LN PLF LP KILC V+N+ L AE++TDEVYAQITL+P ++ +EP
Sbjct: 39 MEQLEASTQQVDLNTMKPLFVLPPKILCNVMNVSLQAEKDTDEVYAQITLIPVGTEVDEP 98
Query: 59 TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
+PDP P + RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDM Q TPTQELVA
Sbjct: 99 MSPDPSPPELQRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVA 158
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
+D+HGY+W+FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGEL VGVR
Sbjct: 159 EDVHGYQWKFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELRVGVRRAN 218
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKF 238
QQSSMPSSVISS SMHLGVLATA HA T+TMF+VYYKPRTSQFIISLNKYLEA++NKF
Sbjct: 219 LQQSSMPSSVISSHSMHLGVLATARHATQTKTMFIVYYKPRTSQFIISLNKYLEAMSNKF 278
Query: 239 AVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSP 298
+VGMR+KMRFEGEDSPERR+SGTV+GV+D SPHWKDSKWR L+V WDEPASI+RP++VSP
Sbjct: 279 SVGMRFKMRFEGEDSPERRYSGTVIGVKDCSPHWKDSKWRCLEVHWDEPASISRPNKVSP 338
Query: 299 WEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVT 358
WEIEPFV S N+ + V+ KNKRPR EV LD+ AS WS+ L Q H Q +T
Sbjct: 339 WEIEPFVNSE--NVPKSVMLKNKRPRQVSEVSALDVGITASNLWSSVLTQPHEFAQSCIT 396
Query: 359 AEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISA 418
++ W +SP QQ ++A +D K S
Sbjct: 397 SQ--------------------------------W-SSP-----QQCHRDANEDAKK-SD 417
Query: 419 WPAHSGHSTPHPSKPN--NDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPV 476
W ++ +S + +K + ND ++ VE +K ET + RLFGI+L++ + + + P+
Sbjct: 418 W-LNNSYSVSNVAKDSTLNDQMVSPVEQ-KKPETTANYRLFGIDLMSSSLAVPEEKTAPM 475
Query: 477 SSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKV 536
+ IS + + SD KS+I+K +EKKQE + SPKE QSKQS +S RSRTKV
Sbjct: 476 RPIN-----ISKPTMDSHSDPKSEISKVSEEKKQEPAEGSPKEVQSKQS--SSTRSRTKV 528
Query: 537 QMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDP 596
QMQGV VGRA+DL L GY+ LID++E++FDIKG+L +R +WEIV+TDDEGDMMLVGDDP
Sbjct: 529 QMQGVPVGRAVDLNALKGYNELIDDIEKLFDIKGELRSRNQWEIVFTDDEGDMMLVGDDP 588
Query: 597 WHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGE 632
W EFCNMVKRIFI S ++VKKM+PG++L M E E
Sbjct: 589 WPEFCNMVKRIFIWSKEEVKKMTPGNQLRMLLREVE 624
>gi|79325241|ref|NP_001031706.1| auxin response factor 9 [Arabidopsis thaliana]
gi|332659436|gb|AEE84836.1| auxin response factor 9 [Arabidopsis thaliana]
Length = 636
Score = 710 bits (1832), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/636 (61%), Positives = 469/636 (73%), Gaps = 56/636 (8%)
Query: 1 MEQLEASTNQ-ELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQ-NEP 58
MEQLEAST Q +LN PLF LP KILC V+N+ L AE++TDEVYAQITL+P ++ +EP
Sbjct: 39 MEQLEASTQQVDLNTMKPLFVLPPKILCNVMNVSLQAEKDTDEVYAQITLIPVGTEVDEP 98
Query: 59 TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
+PDP P + RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDM Q TPTQELVA
Sbjct: 99 MSPDPSPPELQRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVA 158
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
+D+HGY+W+FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGEL VGVR
Sbjct: 159 EDVHGYQWKFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELRVGVRRAN 218
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKF 238
QQSSMPSSVISS SMHLGVLATA HA T+TMF+VYYKPRTSQFIISLNKYLEA++NKF
Sbjct: 219 LQQSSMPSSVISSHSMHLGVLATARHATQTKTMFIVYYKPRTSQFIISLNKYLEAMSNKF 278
Query: 239 AVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSP 298
+VGMR+KMRFEGEDSPERR+SGTV+GV+D SPHWKDSKWR L+V WDEPASI+RP++VSP
Sbjct: 279 SVGMRFKMRFEGEDSPERRYSGTVIGVKDCSPHWKDSKWRCLEVHWDEPASISRPNKVSP 338
Query: 299 WEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVT 358
WEIEPFV S N+ + V+ KNKRPR EV L + AS WS+ L Q H Q +T
Sbjct: 339 WEIEPFVNSE--NVPKSVMLKNKRPRQVSEVSALGI--TASNLWSSVLTQPHEFAQSCIT 394
Query: 359 AEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISA 418
++ W +SP QQ ++A +D K S
Sbjct: 395 SQ---------W------------------------SSP-----QQCHRDANEDAKK-SD 415
Query: 419 WPAHSGHSTPHPSKPN--NDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPV 476
W ++ +S + +K + ND ++ VE +K ET + RLFGI+L++ + + + P+
Sbjct: 416 W-LNNSYSVSNVAKDSTLNDQMVSPVEQ-KKPETTANYRLFGIDLMSSSLAVPEEKTAPM 473
Query: 477 SSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKV 536
+ IS + + SD KS+I+K +EKKQE + SPKE QSKQS +S RSRTKV
Sbjct: 474 RPIN-----ISKPTMDSHSDPKSEISKVSEEKKQEPAEGSPKEVQSKQS--SSTRSRTKV 526
Query: 537 QMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDP 596
QMQGV VGRA+DL L GY+ LID++E++FDIKG+L +R +WEIV+TDDEGDMMLVGDDP
Sbjct: 527 QMQGVPVGRAVDLNALKGYNELIDDIEKLFDIKGELRSRNQWEIVFTDDEGDMMLVGDDP 586
Query: 597 WHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGE 632
W EFCNMVKRIFI S ++VKKM+PG++L M E E
Sbjct: 587 WPEFCNMVKRIFIWSKEEVKKMTPGNQLRMLLREVE 622
>gi|297745485|emb|CBI40565.3| unnamed protein product [Vitis vinifera]
Length = 607
Score = 701 bits (1810), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/644 (58%), Positives = 443/644 (68%), Gaps = 96/644 (14%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
MEQL+ASTNQ ++QRIPLF LPSKILCRVV+ L+AEQETDEVYAQITL PE Q EP +
Sbjct: 50 MEQLQASTNQGVDQRIPLFNLPSKILCRVVHTRLLAEQETDEVYAQITLQPEADQTEPKS 109
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
PD CP ++P+ VHSF K+LTASDTSTHGGFSVLRKHA ECLPPLDM+Q+TPTQELVA+D
Sbjct: 110 PDSCPDEAPKQTVHSFCKILTASDTSTHGGFSVLRKHANECLPPLDMSQATPTQELVARD 169
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGD FVFLRG+NGEL VGVR LARQ
Sbjct: 170 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGDNGELRVGVRRLARQ 229
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAV 240
QS MPSSVISSQSMHLGVLATASHAV TQT+FVVYYKPRTSQFIISLNKYLEAVN FAV
Sbjct: 230 QSPMPSSVISSQSMHLGVLATASHAVTTQTLFVVYYKPRTSQFIISLNKYLEAVNYGFAV 289
Query: 241 GMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWE 300
GMR+KMRFEGEDSPERRF+GT+VG+ D SP W +SKWRSLK+QWDEPA+I RP+RVS W+
Sbjct: 290 GMRFKMRFEGEDSPERRFTGTIVGIGDISPQWSNSKWRSLKIQWDEPATIQRPERVSSWD 349
Query: 301 IEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAE 360
IE P ASA S NLTQ V +
Sbjct: 350 IE--------------------------------PFVASA--------SLNLTQPPVKIK 369
Query: 361 DKR-IDNHVAWHHKHSDFSSNSNFMSRTQSDGEWL--TSPRVKFSQQLFQEAIDDNKNIS 417
R +D VA +++ S S F W +SP + +Q + +++
Sbjct: 370 RPRPLDLPVA---ENTSSSVPSPF---------WYAGSSPSHELTQLGGVTEVQSSESQV 417
Query: 418 AWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVS 477
WP P P + N + + CRLFGI+L N++ ++A E +
Sbjct: 418 HWP-------PKPKEINGNQ-----------NSSIGCRLFGIDLTNNSKATALLEMI--- 456
Query: 478 SLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTK-V 536
D++K E+KQ + S KE+Q +QSC S+R+RTK V
Sbjct: 457 -------------------QNLDVSKSSNEQKQVVPEASQKETQGRQSCTPSSRTRTKKV 497
Query: 537 QMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDP 596
QMQGVAVGRA+DLT L GYD LI ELE+MF+IKG+L R KWE+V+TDDEGDMMLVGDDP
Sbjct: 498 QMQGVAVGRAVDLTALEGYDELISELEKMFEIKGELCPRNKWEVVFTDDEGDMMLVGDDP 557
Query: 597 WHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGEDILLSSDS 640
W EFC MV++IFI SS++VKKMSP KL S++GE ++S DS
Sbjct: 558 WQEFCKMVRKIFIYSSEEVKKMSPRCKLSTSSLDGEGTVISLDS 601
>gi|379323216|gb|AFD01307.1| auxin response factor 9-1 [Brassica rapa subsp. pekinensis]
Length = 602
Score = 699 bits (1804), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/630 (59%), Positives = 447/630 (70%), Gaps = 71/630 (11%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
MEQLEAST Q+LN PLF LP KILCRV+N+ L AE++TDEVYAQI L+PE + +EP +
Sbjct: 31 MEQLEASTQQDLNTMKPLFDLPPKILCRVMNVRLQAEKDTDEVYAQIMLMPEGTVDEPMS 90
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
PDP P + +PK HSF+KVLTASDTSTHGGFSVLRKHATECLPPLDM Q TPTQELVA+D
Sbjct: 91 PDPSPPELQKPKFHSFTKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAED 150
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
+HGY+W+FKHIFRGQPRRHLLTTGWSTFVTSK+LVAGDTFVFLRGENGEL VGVR RQ
Sbjct: 151 VHGYKWKFKHIFRGQPRRHLLTTGWSTFVTSKKLVAGDTFVFLRGENGELRVGVRRANRQ 210
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAV 240
QSSMPSSVISS SMHLGVLATA HA T++MF VYYKPRTSQFI+SL+KYLEA+N+KF+V
Sbjct: 211 QSSMPSSVISSHSMHLGVLATACHATQTRSMFTVYYKPRTSQFILSLHKYLEAMNSKFSV 270
Query: 241 GMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWE 300
GMR+KMRFEG+DSPERRFSGTVVGV+D SPHWKDSKWRSL V WDEPAS TRPD+VSPWE
Sbjct: 271 GMRFKMRFEGDDSPERRFSGTVVGVQDCSPHWKDSKWRSLIVNWDEPASFTRPDKVSPWE 330
Query: 301 IEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAE 360
+EPF AS N+ Q V NKR R E+ L +PS S WS+ L QSH Q +T++
Sbjct: 331 MEPFAASE--NVPQSV---NKRARHVNEISALGVPS--SNFWSSALTQSHEFAQSCITSQ 383
Query: 361 DKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWP 420
N S WP
Sbjct: 384 RNPPQN--------------------------------------------------SDWP 393
Query: 421 AHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLT 480
P N ++ VE + T SCRLFGI+L++ + + + P+ +
Sbjct: 394 V-------SPYSTLNGQMVFPVEQKKPETTTASCRLFGIDLMSSSLPAHEEKTAPMRPIN 446
Query: 481 TEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQG 540
I+ + +++D KS+I+K +EKKQE Q SPKE QSKQ + S+RSRTKVQMQG
Sbjct: 447 -----ITKPTLDSNADPKSEISKLSEEKKQEPAQASPKEVQSKQ--INSSRSRTKVQMQG 499
Query: 541 VAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEF 600
V VGRA+DLT + GY LID+LE++FDI+G+L +R +WEIV+TDDEGDMMLVGDDPW EF
Sbjct: 500 VPVGRAVDLTLINGYVELIDDLEKLFDIEGELKSRNQWEIVFTDDEGDMMLVGDDPWPEF 559
Query: 601 CNMVKRIFICSSQDVKKMSPGSKLPMFSIE 630
CNMVKRIFI S ++VKKM+PG++L + E
Sbjct: 560 CNMVKRIFIWSKEEVKKMTPGNQLRILLTE 589
>gi|356504181|ref|XP_003520877.1| PREDICTED: auxin response factor 18-like [Glycine max]
Length = 662
Score = 687 bits (1773), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/646 (58%), Positives = 450/646 (69%), Gaps = 29/646 (4%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
MEQL+ASTNQ LNQ IP F LP KILCRVV+I L+AEQETDEVYA+ITLLPE +Q EPT+
Sbjct: 39 MEQLQASTNQGLNQEIPHFNLPPKILCRVVHIQLLAEQETDEVYARITLLPESNQEEPTS 98
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
PDP P ++ + H+FSK+LTASDTSTHGGFSVLR+HATECLP LDM Q+TP+QELVA+D
Sbjct: 99 PDPSPPETQKQVFHTFSKILTASDTSTHGGFSVLRRHATECLPQLDMTQTTPSQELVAED 158
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
LHG+EW+FKHIFRGQPRRHLLTTGWSTFVTSK+LVAGD FVFLRGENGEL VGVR +ARQ
Sbjct: 159 LHGFEWKFKHIFRGQPRRHLLTTGWSTFVTSKKLVAGDAFVFLRGENGELRVGVRRVARQ 218
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAV 240
QS MPSSVISSQSMHLGVLATASHA T TMFVVYYKPRTSQFII +NKYLEA NNKF+V
Sbjct: 219 QSPMPSSVISSQSMHLGVLATASHAFLTSTMFVVYYKPRTSQFIIGVNKYLEAENNKFSV 278
Query: 241 GMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWE 300
GMR+KMRFE EDSPERRFSGT+VGV D SP W +S+WRSLKVQWDEPA I RP+RVS WE
Sbjct: 279 GMRFKMRFEVEDSPERRFSGTIVGVGDVSPGWWNSQWRSLKVQWDEPAIIPRPERVSSWE 338
Query: 301 IEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAE 360
IEPF AS N+ Q L K+KR R + + S A A W + T L + E
Sbjct: 339 IEPFAASTALNVTQQ-LVKSKRSRTEVSSSEIAPNSPALAFW---YRGPQDPTALGSSTE 394
Query: 361 DKRIDNHVAWHHKHSDFSSNS-NFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAW 419
+ +N V W + + + N N S+ + +G +SP K LF D KN A
Sbjct: 395 VQSNENPVVWSTRQKEINGNPMNSSSKVRVEGMRPSSPHSK--PNLFM----DPKNCKAV 448
Query: 420 PAHSGHSTPHPSKPNNDTLLEQVETG-RKTETGTSCRLFGIELINHATSSAP---SEKVP 475
PA S S S+P +D + +E R ++ +C +FG+ L N+ T + E++
Sbjct: 449 PAQSTVS----SRPKDDLAHDPMECAKRSSQNPMNCWIFGVNLTNNITKNVTLPDKEQLG 504
Query: 476 VSSLTTEGHIISTISAAADSDGKSDIAKEF--KEKKQEQVQVSPKESQSKQSCLTSNRSR 533
++ G S AA +++ + KE KQ SP SQ R+R
Sbjct: 505 CPAIIPSGPKDSIPVAACETEAGQNPYYSLSNKEHKQNISDGSPSASQRH------TRTR 558
Query: 534 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVG 593
TKVQMQG+AVGRA+DLT L YD LIDELE+MFDIKG+L +TKW I +TDD DMMLVG
Sbjct: 559 TKVQMQGIAVGRAVDLTVLKDYDDLIDELEKMFDIKGELQMQTKWAITFTDDGNDMMLVG 618
Query: 594 DDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGEDILLSSD 639
DDPW EFC +VKRIFICS +DVKKM SK S GE+ LLS D
Sbjct: 619 DDPWPEFCTVVKRIFICSREDVKKMK--SKHSSSSSVGEETLLSQD 662
>gi|350539809|ref|NP_001234534.1| auxin response factor 9 [Solanum lycopersicum]
gi|296245060|gb|ADH03013.1| auxin response factor 9 [Solanum lycopersicum]
Length = 644
Score = 665 bits (1717), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/626 (56%), Positives = 448/626 (71%), Gaps = 34/626 (5%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPE-PSQNEPT 59
MEQL AS NQE++QR+P F L SK+LCRV+N H +AE++ DEVY QITL+PE P EPT
Sbjct: 40 MEQLVASINQEMDQRVPSFNLKSKVLCRVINSHFLAEEDNDEVYVQITLMPEAPHVPEPT 99
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
TPDP +P+ HSF KVLTASDTSTHGGFSVLRKHA ECLPPLD+NQ TPTQEL+AK
Sbjct: 100 TPDPLIPQDVKPRFHSFCKVLTASDTSTHGGFSVLRKHANECLPPLDLNQQTPTQELIAK 159
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH EWRFKHIFRGQPRRHLLTTGWSTFV+SK+LVAGD+FVFLRG NG+L VGV+ L R
Sbjct: 160 DLHDVEWRFKHIFRGQPRRHLLTTGWSTFVSSKKLVAGDSFVFLRGNNGQLRVGVKRLVR 219
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFA 239
QQSSMPSSV+SSQSMHLGVLATASHAV TQTMFVVYYKPRT+QFI+ +NKYLEA+ +++A
Sbjct: 220 QQSSMPSSVMSSQSMHLGVLATASHAVTTQTMFVVYYKPRTTQFIVGVNKYLEALKHEYA 279
Query: 240 VGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPW 299
VGMR+KM+FE E +P+RRF GT+VG++D S WK+S WRSLKV+WDEPA+I RPDRVSPW
Sbjct: 280 VGMRFKMQFEAEGNPDRRFMGTIVGIDDLSSQWKNSAWRSLKVRWDEPAAIARPDRVSPW 339
Query: 300 EIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSA--ASAPWSARLAQSHNLTQLSV 357
EI+P+V S LV P KNKR RL E+ + PS+ ASA W+ L +S +
Sbjct: 340 EIKPYVCSIPNVLVPPTAEKNKRHRLHSEIKISEQPSSSNASAVWNPSL-RSPQFNTFGI 398
Query: 358 TAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNIS 417
+ S+N S T+S + P + S L E +D ++
Sbjct: 399 NS------------------STNCALASLTESGWQL---PHLNTSGMLVDEP-EDGRSAP 436
Query: 418 AWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPS----EK 473
W P + N ++ + GRK +T +CRLFGI+L + + S+ + +
Sbjct: 437 TWCGFPCVLAPQFGQGTNQPIVIPTD-GRKCDTKKTCRLFGIDLKSSSISTTEARLQLQP 495
Query: 474 VPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSR 533
+S + E +T+ A DSD KS+++ +FK++ Q +++ KE QSKQSC S RSR
Sbjct: 496 AGISCVFAERAPPNTV-PAGDSDQKSELSVDFKDQMQGHLRLPLKEVQSKQSC--STRSR 552
Query: 534 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVG 593
TKVQMQGVAVGRA+DLT L GYD L ELEEMF+I+G+L +R KW I++TDDEGD ML+G
Sbjct: 553 TKVQMQGVAVGRAVDLTILKGYDELTKELEEMFEIQGELQSRQKWGILFTDDEGDTMLMG 612
Query: 594 DDPWHEFCNMVKRIFICSSQDVKKMS 619
D PW +FCN+V++IFICSSQD+KK++
Sbjct: 613 DYPWQDFCNVVRKIFICSSQDMKKLT 638
>gi|449532717|ref|XP_004173327.1| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 9-like,
partial [Cucumis sativus]
Length = 590
Score = 633 bits (1633), Expect = e-179, Method: Compositional matrix adjust.
Identities = 341/580 (58%), Positives = 415/580 (71%), Gaps = 17/580 (2%)
Query: 55 QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQ 114
Q+EP + DP P + R V F K+LTASDTSTHGGFSVLRKHA ECLPPLDM+QSTPTQ
Sbjct: 1 QSEPQSADPEPPERTRQTVRFFCKILTASDTSTHGGFSVLRKHAAECLPPLDMSQSTPTQ 60
Query: 115 ELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGV 174
EL AKDLHGYEW+FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGD FVFLRG+NGEL VGV
Sbjct: 61 ELAAKDLHGYEWKFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGDNGELRVGV 120
Query: 175 RCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAV 234
R ARQQS MPSSVISS SMHLGVLATASHAV TQT FVVYYKPRTSQFIISLNKYLE V
Sbjct: 121 RRQARQQSLMPSSVISSHSMHLGVLATASHAVRTQTYFVVYYKPRTSQFIISLNKYLETV 180
Query: 235 NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPD 294
N + VGMR+KMRFEGE+SPERRF+GT+VGV D SP W DSKWRSLK+QWDEPA+I RP+
Sbjct: 181 KNGYEVGMRFKMRFEGEESPERRFTGTIVGVGDMSPQWSDSKWRSLKIQWDEPATIQRPE 240
Query: 295 RVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLP--SAASAPWSARLAQSHNL 352
RVSPWEIEPFV SA+ N P + K+KR R +E+PP ++ SA S W SH +
Sbjct: 241 RVSPWEIEPFVPSASLNFTHPAI-KSKRAR-PVEIPPPEVTSGSAPSGFWLQGSTISHEI 298
Query: 353 TQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQS-DGEWLTSPRVKFSQQLFQEAID 411
+QLS T E + +N V W SNS+ + + +G W SP + S L+ ++
Sbjct: 299 SQLSGTNEVQSSNNRVVWALGQRKLDSNSSHCNPVANVEGIW-PSPPLNISLNLYPDSTF 357
Query: 412 DNKNI-SAWPAHSGHSTPHPSKPNNDTLL-EQVETGRKTETGTSCRLFGIELINHATSSA 469
+ + + P S +S+ SKP++D + +Q+E G K + CR+FGI+L N+ +
Sbjct: 358 ERELVQQKHPLSSPYSSSVTSKPSSDLIQPDQLEKGSKPDISLGCRIFGIDLKNNCSIVP 417
Query: 470 PSEK-----VPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQ 524
E+ + V+ E + + ++ D+ S +KE +Q ++ K +Q+K
Sbjct: 418 TLERRSSCLMMVTDGAKEPVVTAVVTPQVDAGNLSQPSKE----QQLSTELLTKGTQTKH 473
Query: 525 SCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTD 584
S+R+RTKVQMQGVAVGRA+DLTTL GY+ LIDELE +F+IKG+L KW IV+TD
Sbjct: 474 ISNLSSRTRTKVQMQGVAVGRAVDLTTLEGYEDLIDELENVFEIKGELRGINKWSIVFTD 533
Query: 585 DEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 624
DE DMMLVGDDPW EFC MVKRIFICSS++VKKMS SK+
Sbjct: 534 DENDMMLVGDDPWPEFCKMVKRIFICSSEEVKKMSRESKI 573
>gi|449517487|ref|XP_004165777.1| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 9-like,
partial [Cucumis sativus]
Length = 584
Score = 621 bits (1601), Expect = e-175, Method: Compositional matrix adjust.
Identities = 340/539 (63%), Positives = 398/539 (73%), Gaps = 12/539 (2%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
MEQLEASTN ELN+RIPLF L SKILCRV++I +A+ E+DEVYAQITL+PE +QNEP +
Sbjct: 54 MEQLEASTNLELNKRIPLFNLDSKILCRVIHIEPLADHESDEVYAQITLMPESNQNEPKS 113
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
DPCP + PRP VHSF KVLTASDTSTHGGFSVLRKHATECLPPLDM +TPTQ+LVAKD
Sbjct: 114 MDPCPPEPPRPVVHSFCKVLTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQDLVAKD 173
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL AGD+FVFLRG+NGEL VGVR ARQ
Sbjct: 174 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLSAGDSFVFLRGDNGELRVGVRRRARQ 233
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAV 240
QSSMP SVISSQSMHLGVLATASHAV TQT FVVYYKPRT QFIISLNKYLEAVNNKF+V
Sbjct: 234 QSSMPPSVISSQSMHLGVLATASHAVTTQTRFVVYYKPRTCQFIISLNKYLEAVNNKFSV 293
Query: 241 GMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWE 300
GMR+ M FEGEDSPERRFSGT++G D SPHW +S WRSL+VQWDE SI RPDRVSPW+
Sbjct: 294 GMRFNMSFEGEDSPERRFSGTIIGAVDISPHWPNSSWRSLRVQWDEQTSILRPDRVSPWD 353
Query: 301 IEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAP--WSARLAQSHNLTQLSVT 358
IEP +SA L QP KNKRPR + P + + P W + LAQSH+ Q S
Sbjct: 354 IEPLTSSAVTGLSQPXF-KNKRPR---QPTPAHDGADLTKPTHWDSGLAQSHDGKQCSNA 409
Query: 359 AEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNI-- 416
AE ++ +N+ + HH+ +D SNS+ +SRTQ+D WL+ + + + D+K +
Sbjct: 410 AEGRKGENNESCHHRETDTISNSSCVSRTQTD-TWLSPTQSNSYKHPVNDMAQDSKTVPS 468
Query: 417 SAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPV 476
S W G T H K ++D +L+ +E+G+K ET SCRLFGI+L NH + S +
Sbjct: 469 SGWTFLLGTPTSHLVKLSDDQILDPIESGKKGETVASCRLFGIDL-NHLAAEKASSQPSS 527
Query: 477 SSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTK 535
S T+G IST+S A SD KSD + E+K E Q S KE Q QS + RSRTK
Sbjct: 528 GSSDTDGR-ISTLS-VAQSDPKSDNLEVSIERKSELSQASLKEIQCNQSSSANTRSRTK 584
>gi|297824735|ref|XP_002880250.1| hypothetical protein ARALYDRAFT_904120 [Arabidopsis lyrata subsp.
lyrata]
gi|297326089|gb|EFH56509.1| hypothetical protein ARALYDRAFT_904120 [Arabidopsis lyrata subsp.
lyrata]
Length = 600
Score = 611 bits (1576), Expect = e-172, Method: Compositional matrix adjust.
Identities = 348/644 (54%), Positives = 418/644 (64%), Gaps = 102/644 (15%)
Query: 1 MEQLEASTNQEL-NQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPT 59
MEQL ASTNQ + +Q IP+F LP KILCRV+++ L AE ETDEVYAQITL PE Q+EPT
Sbjct: 48 MEQLVASTNQGVVDQEIPVFNLPPKILCRVLSVMLKAEHETDEVYAQITLQPEEDQSEPT 107
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
+ DP + +P V SF K+LTASDTSTHGGFSVLRKHATECLP LDM Q TPTQELVA+
Sbjct: 108 SLDPPLVEPAKPTVDSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVAR 167
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGD FVFLRG+ G+L VGVR LA+
Sbjct: 168 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGQTGDLRVGVRRLAK 227
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFA 239
QQS+MP+SVISSQSM LGVLATASHAV T T+FVV+YKPR SQFIIS+NKY+ A+ N F+
Sbjct: 228 QQSTMPASVISSQSMRLGVLATASHAVTTTTIFVVFYKPRISQFIISVNKYMVAMKNGFS 287
Query: 240 VGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPW 299
+GMR++MRFEGE+SPER F+GT+VG D S W SKWRSL++QWDEP+SI RP++VSPW
Sbjct: 288 LGMRFRMRFEGEESPERIFTGTIVGSGDLSSQWPASKWRSLQIQWDEPSSIPRPNKVSPW 347
Query: 300 EIEPFVASA-TPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVT 358
EIEPF SA TP Q +K+KR R P+++ + +A
Sbjct: 348 EIEPFSPSALTPTPTQQ-QSKSKRSR------PIEITGSPAA------------------ 382
Query: 359 AEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQE-AIDDNKNIS 417
SNF+S E ++P VK LF + A + N N S
Sbjct: 383 ----------------------SNFLSSFPQSHE--SNPSVKL---LFHDIATERNSNKS 415
Query: 418 AWPAHSGHSTPHPSKPNNDTLLEQVETGRKTE--TGTSCRLFGIELINHATSSAPSEKVP 475
+ SG +KTE + CRLFG +L TS S +P
Sbjct: 416 VF--SSGLQC------------------KKTEAPVTSCCRLFGFDL----TSKPASAPIP 451
Query: 476 VSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTK 535
+ +IS S +DS K + SPKE + + TS RSR K
Sbjct: 452 CNK-----QLISVDSNISDSTPKC---------QDPNSSNSPKEQKQQ----TSTRSRIK 493
Query: 536 VQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDD 595
VQMQG AVGRA+DLT L YD LI ELE+MF+I+G+L + KW IV+TDDEGDMMLVGDD
Sbjct: 494 VQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEGELSPKDKWTIVFTDDEGDMMLVGDD 553
Query: 596 PWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGEDILLSSD 639
PW+EFC M K++FI S +VKK+S S LP EG + L SD
Sbjct: 554 PWNEFCKMAKKLFIYPSDEVKKLSSKSLLP---DEGTIVYLESD 594
>gi|359493580|ref|XP_003634630.1| PREDICTED: auxin response factor 1-like isoform 2 [Vitis vinifera]
Length = 640
Score = 609 bits (1571), Expect = e-171, Method: Compositional matrix adjust.
Identities = 336/632 (53%), Positives = 425/632 (67%), Gaps = 74/632 (11%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
MEQLEAS +Q L+Q++P F LPSKILC+VVN+HL AE ETDEVYAQ+TLLPEP Q+E T+
Sbjct: 49 MEQLEASMHQGLDQKMPSFNLPSKILCKVVNVHLRAEPETDEVYAQVTLLPEPDQSEITS 108
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
PDP + VHSF K LTASDTSTHGGFSVLR+HA ECLPPLDM+Q+ P QELVAKD
Sbjct: 109 PDPPLPEPQSCTVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQNPPWQELVAKD 168
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
LHG EW F+HIFRGQPRRHLLTTGWS FV+SKRL AGD F+FLRGENGEL VGVR L RQ
Sbjct: 169 LHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKRLAAGDAFIFLRGENGELRVGVRRLMRQ 228
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAV 240
+++P SVISS SMHLGVLATASHA+ T T+F V+YKP S+FI+S+NKYLEA N+K +V
Sbjct: 229 LNNVPPSVISSHSMHLGVLATASHAITTGTLFSVFYKPSPSEFIVSVNKYLEARNHKVSV 288
Query: 241 GMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPW 299
GMR+KMRFEG+++PERRFSGT+VGV D S W DS+WRSLKVQWDEP+SI RP+RVSPW
Sbjct: 289 GMRFKMRFEGDEAPERRFSGTIVGVGDTGSSGWTDSEWRSLKVQWDEPSSILRPERVSPW 348
Query: 300 EIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTA 359
E+EP V + TP QP + ++KRPR P L P+ + ++ + SH+ T V
Sbjct: 349 ELEPLV-TETPLTAQP-MQRSKRPR----SPVLSSPTPGLSAFAVK-TNSHSFT---VNY 398
Query: 360 EDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAW 419
+ N+ A+ + S+ +LF
Sbjct: 399 SSTAVSNNSAYWPQQSEPVP------------------------ELF------------- 421
Query: 420 PAHSGHSTPHPSKPNNDTLLEQVETGRKT-ETGTSCRLFGIELINHATSSAPSEKVPVSS 478
TP P+K E G+K E G RLFGI+L++++ E +PV++
Sbjct: 422 -------TPVPNK----------EYGKKKPENGNGYRLFGIQLVDNSNV---EETLPVTT 461
Query: 479 LTT-EGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSN--RSRTK 535
+++ G + ADSD +S + + K V P++S S L S RS TK
Sbjct: 462 ISSGAGEDQPVVCLDADSDHQSQRSN-INQSKTPTVGSDPEKSCLGSSLLQSRQIRSCTK 520
Query: 536 VQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRT-KWEIVYTDDEGDMMLVGD 594
V MQG+AVGRA+DLT Y L+ +LEEMFDIKG+L T KW++VYTDDE DMM+VGD
Sbjct: 521 VHMQGMAVGRAVDLTQFSSYKELLSKLEEMFDIKGELCGPTKKWQVVYTDDEDDMMMVGD 580
Query: 595 DPWHEFCNMVKRIFICSSQDVKKMSPGSKLPM 626
DPWHEFC+MV++IFI + ++VK++SP +KLP+
Sbjct: 581 DPWHEFCSMVRKIFIYTVEEVKELSPKAKLPL 612
>gi|225459961|ref|XP_002266947.1| PREDICTED: auxin response factor 1-like isoform 1 [Vitis vinifera]
Length = 645
Score = 608 bits (1568), Expect = e-171, Method: Compositional matrix adjust.
Identities = 337/634 (53%), Positives = 426/634 (67%), Gaps = 76/634 (11%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
MEQLEAS +Q L+Q++P F LPSKILC+VVN+HL AE ETDEVYAQ+TLLPEP Q+E T+
Sbjct: 52 MEQLEASMHQGLDQKMPSFNLPSKILCKVVNVHLRAEPETDEVYAQVTLLPEPDQSEITS 111
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
PDP + VHSF K LTASDTSTHGGFSVLR+HA ECLPPLDM+Q+ P QELVAKD
Sbjct: 112 PDPPLPEPQSCTVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQNPPWQELVAKD 171
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
LHG EW F+HIFRGQPRRHLLTTGWS FV+SKRL AGD F+FLRGENGEL VGVR L RQ
Sbjct: 172 LHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKRLAAGDAFIFLRGENGELRVGVRRLMRQ 231
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKF 238
+++P SVISS SMHLGVLATASHA+ T T+F V+YKPR S+FI+S+NKYLEA N+K
Sbjct: 232 LNNVPPSVISSHSMHLGVLATASHAITTGTLFSVFYKPRASPSEFIVSVNKYLEARNHKV 291
Query: 239 AVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVS 297
+VGMR+KMRFEG+++PERRFSGT+VGV D S W DS+WRSLKVQWDEP+SI RP+RVS
Sbjct: 292 SVGMRFKMRFEGDEAPERRFSGTIVGVGDTGSSGWTDSEWRSLKVQWDEPSSILRPERVS 351
Query: 298 PWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSV 357
PWE+EP V + TP QP + ++KRPR P L P+ + ++ + SH+ T V
Sbjct: 352 PWELEPLV-TETPLTAQP-MQRSKRPR----SPVLSSPTPGLSAFAVK-TNSHSFT---V 401
Query: 358 TAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNIS 417
+ N+ A+ + S+ +LF
Sbjct: 402 NYSSTAVSNNSAYWPQQSEPVP------------------------ELF----------- 426
Query: 418 AWPAHSGHSTPHPSKPNNDTLLEQVETGRKT-ETGTSCRLFGIELINHATSSAPSEKVPV 476
TP P+K E G+K E G RLFGI+L++++ E +PV
Sbjct: 427 ---------TPVPNK----------EYGKKKPENGNGYRLFGIQLVDNSNV---EETLPV 464
Query: 477 SSLTT-EGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSN--RSR 533
+++++ G + ADSD +S + + K V P++S S L S RS
Sbjct: 465 TTISSGAGEDQPVVCLDADSDHQSQRSN-INQSKTPTVGSDPEKSCLGSSLLQSRQIRSC 523
Query: 534 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRT-KWEIVYTDDEGDMMLV 592
TKV MQG+AVGRA+DLT Y L+ +LEEMFDIKG+L T KW++VYTDDE DMM+V
Sbjct: 524 TKVHMQGMAVGRAVDLTQFSSYKELLSKLEEMFDIKGELCGPTKKWQVVYTDDEDDMMMV 583
Query: 593 GDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPM 626
GDDPWHEFC+MV++IFI + ++VK++SP +KLP+
Sbjct: 584 GDDPWHEFCSMVRKIFIYTVEEVKELSPKAKLPL 617
>gi|224119856|ref|XP_002331079.1| predicted protein [Populus trichocarpa]
gi|222872807|gb|EEF09938.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 608 bits (1568), Expect = e-171, Method: Compositional matrix adjust.
Identities = 344/631 (54%), Positives = 428/631 (67%), Gaps = 57/631 (9%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
MEQLEAS +Q + Q++P F LPSKILC+VVN+ AE ETDEVYAQITLLPEP Q+E T+
Sbjct: 48 MEQLEASMHQGMEQQMPSFNLPSKILCKVVNVQRRAEPETDEVYAQITLLPEPDQSEVTS 107
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
PDP + R VHSF K LTASDTSTHGGFSVLR+HA +CLPPLDM+Q P QELVA D
Sbjct: 108 PDPPLPEPERCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATD 167
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
LHG EW F+HIFRGQPRRHLLTTGWS FV+SK+LVAGD F+FLRGENGEL VGVR L RQ
Sbjct: 168 LHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQ 227
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKF 238
Q++MPSSVISSQSMHLGVLATASHA+AT T+F V+YKPRT S+FI++LNKY+EA N+K
Sbjct: 228 QTNMPSSVISSQSMHLGVLATASHAIATGTLFSVFYKPRTSRSEFIVNLNKYIEAQNHKL 287
Query: 239 AVGMRYKMRFEGEDSPERRFSGTVVGVED-FSPHWKDSKWRSLKVQWDEPASITRPDRVS 297
+VGMR+KMRFEGE+ PERRFSGT+VGV D S W DS+WRSLKV WDEP+SI RP+RVS
Sbjct: 288 SVGMRFKMRFEGEEVPERRFSGTIVGVGDNISSGWADSEWRSLKVHWDEPSSILRPERVS 347
Query: 298 PWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSV 357
PW++EP VA+ TP+ QP + +NKRPR S+ LPS + NL+ L +
Sbjct: 348 PWDLEPLVAT-TPSNSQP-MQRNKRPRPSV------LPSPTA-----------NLSALGM 388
Query: 358 TAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNIS 417
W K S SS ++ +Q + SP + + + N ++
Sbjct: 389 ------------W--KPSVESSAFSY-GESQRGRDPYPSPNFSTTAKANSLSFCGNSQVT 433
Query: 418 AWPAHSGHSTPHPSKPNNDTLLEQVETG---RKTETGTSCRLFGIELINHATSSAPSEKV 474
+ +S + P+ + D+ V R+ TG RLFGI+LI++ + S V
Sbjct: 434 SVSPNSMYR-PNQVESVTDSFAPVVNKDLGERRQGTGIGYRLFGIQLIDNFNAEGTSPVV 492
Query: 475 PVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRT 534
VS T G+ +S A+SD S+ K QE QS+Q RS T
Sbjct: 493 TVSG--TVGNDRPVVSLEAESDQHSEPEKSCLRSHQEL--------QSRQI-----RSCT 537
Query: 535 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRT-KWEIVYTDDEGDMMLVG 593
KV MQGVAVGRA+DLT Y+ L+ +LEEMFDI+G+L T KW++VYTD+E DMM VG
Sbjct: 538 KVHMQGVAVGRAVDLTQFERYEDLLRKLEEMFDIEGELSGSTKKWQVVYTDNEDDMMKVG 597
Query: 594 DDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 624
DDPWHEFC+MVK+IFI +S++VK++SP KL
Sbjct: 598 DDPWHEFCSMVKKIFIYASEEVKRLSPKIKL 628
>gi|297734755|emb|CBI16989.3| unnamed protein product [Vitis vinifera]
Length = 643
Score = 608 bits (1567), Expect = e-171, Method: Compositional matrix adjust.
Identities = 337/634 (53%), Positives = 426/634 (67%), Gaps = 76/634 (11%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
MEQLEAS +Q L+Q++P F LPSKILC+VVN+HL AE ETDEVYAQ+TLLPEP Q+E T+
Sbjct: 50 MEQLEASMHQGLDQKMPSFNLPSKILCKVVNVHLRAEPETDEVYAQVTLLPEPDQSEITS 109
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
PDP + VHSF K LTASDTSTHGGFSVLR+HA ECLPPLDM+Q+ P QELVAKD
Sbjct: 110 PDPPLPEPQSCTVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQNPPWQELVAKD 169
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
LHG EW F+HIFRGQPRRHLLTTGWS FV+SKRL AGD F+FLRGENGEL VGVR L RQ
Sbjct: 170 LHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKRLAAGDAFIFLRGENGELRVGVRRLMRQ 229
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKF 238
+++P SVISS SMHLGVLATASHA+ T T+F V+YKPR S+FI+S+NKYLEA N+K
Sbjct: 230 LNNVPPSVISSHSMHLGVLATASHAITTGTLFSVFYKPRASPSEFIVSVNKYLEARNHKV 289
Query: 239 AVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVS 297
+VGMR+KMRFEG+++PERRFSGT+VGV D S W DS+WRSLKVQWDEP+SI RP+RVS
Sbjct: 290 SVGMRFKMRFEGDEAPERRFSGTIVGVGDTGSSGWTDSEWRSLKVQWDEPSSILRPERVS 349
Query: 298 PWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSV 357
PWE+EP V + TP QP + ++KRPR P L P+ + ++ + SH+ T V
Sbjct: 350 PWELEPLV-TETPLTAQP-MQRSKRPR----SPVLSSPTPGLSAFAVK-TNSHSFT---V 399
Query: 358 TAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNIS 417
+ N+ A+ + S+ +LF
Sbjct: 400 NYSSTAVSNNSAYWPQQSEPVP------------------------ELF----------- 424
Query: 418 AWPAHSGHSTPHPSKPNNDTLLEQVETGRKT-ETGTSCRLFGIELINHATSSAPSEKVPV 476
TP P+K E G+K E G RLFGI+L++++ E +PV
Sbjct: 425 ---------TPVPNK----------EYGKKKPENGNGYRLFGIQLVDNSNV---EETLPV 462
Query: 477 SSLTT-EGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSN--RSR 533
+++++ G + ADSD +S + + K V P++S S L S RS
Sbjct: 463 TTISSGAGEDQPVVCLDADSDHQSQRSN-INQSKTPTVGSDPEKSCLGSSLLQSRQIRSC 521
Query: 534 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRT-KWEIVYTDDEGDMMLV 592
TKV MQG+AVGRA+DLT Y L+ +LEEMFDIKG+L T KW++VYTDDE DMM+V
Sbjct: 522 TKVHMQGMAVGRAVDLTQFSSYKELLSKLEEMFDIKGELCGPTKKWQVVYTDDEDDMMMV 581
Query: 593 GDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPM 626
GDDPWHEFC+MV++IFI + ++VK++SP +KLP+
Sbjct: 582 GDDPWHEFCSMVRKIFIYTVEEVKELSPKAKLPL 615
>gi|301793217|emb|CBA11999.1| putative auxin response factor 1 [Illicium parviflorum]
Length = 684
Score = 607 bits (1564), Expect = e-171, Method: Compositional matrix adjust.
Identities = 352/640 (55%), Positives = 433/640 (67%), Gaps = 55/640 (8%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
MEQLEASTNQ +Q++PLF LP+KILCRVV++ L AE ETDEVYAQITLLPEP Q E T+
Sbjct: 52 MEQLEASTNQGADQQMPLFSLPAKILCRVVHVQLRAEPETDEVYAQITLLPEPEQGEITS 111
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
PDP + PR VHSF K LTASDTSTHGGFSVLR+HA ECLP LDM+Q P QELVA D
Sbjct: 112 PDPPIPEPPRCTVHSFCKTLTASDTSTHGGFSVLRRHADECLPQLDMSQHPPWQELVATD 171
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
LHG EW F+HIFRGQPRRHLLTTGWS FV+SKRLVAGD F+FLRGENGEL VGVR L RQ
Sbjct: 172 LHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRLMRQ 231
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKF 238
S+MPSSVISS SMHLGVLATASHA++T T+F V+YKPRTSQ FIISLNKYLEA N+K
Sbjct: 232 PSNMPSSVISSHSMHLGVLATASHAISTGTLFSVFYKPRTSQSEFIISLNKYLEAKNHKL 291
Query: 239 AVGMRYKMRFEGEDSPERRFSGTVVGVED-FSPHWKDSKWRSLKVQWDEPASITRPDRVS 297
+VGMR+KMRFEGED+PERRFSGT++GV D S W DS+WRSLKVQWDEP+SI RP RVS
Sbjct: 292 SVGMRFKMRFEGEDAPERRFSGTIIGVGDAVSSRWADSEWRSLKVQWDEPSSIPRPVRVS 351
Query: 298 PWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSV 357
PWE+EP VA A P+ QP ++KR R PP LPS P +R +SH
Sbjct: 352 PWELEPLVA-AVPSAPQPT-PRSKRAR-----PPALLPSTPDIPACSRW-KSH------- 396
Query: 358 TAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVK---FSQQLFQEAIDDNK 414
ID A+ H S + S S + ++ FS + + +
Sbjct: 397 ------IDAGSAFSHS-SGLQRGLDLYSSANSPTVFANMTKIGSLPFSGT--NASCEISG 447
Query: 415 NISAWPAHSGHSTPHPSKPNNDTLLEQVETG-RKTETGTSCRLFGIELINHATSSAPSEK 473
N+S W + TP S N + E+G R+ E+G RLFGI+L++++T + S
Sbjct: 448 NLSYWSNRA--ETPAKSFMANS----KRESGDRRPESGNGYRLFGIQLVDNSTMAESSPA 501
Query: 474 VPVSSLTTEGHIISTISAAADSDGK---SDIAKE----FKEKKQEQVQVSPKESQSKQSC 526
VS G + S DSD + SDI + K + +SP+E QS+Q+
Sbjct: 502 AAVS-----GGVGEDRSVPEDSDQQSQPSDIDRSDLPAVSGKPDKYCLMSPQEMQSRQT- 555
Query: 527 LTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRT-KWEIVYTDD 585
RS TKV +QG+AVGRA+DL+ L Y+ L+++LE+MF+I+G+L T KW++VYTDD
Sbjct: 556 ----RSCTKVHLQGMAVGRAVDLSRLDCYEDLLNKLEQMFNIEGELSGPTKKWQLVYTDD 611
Query: 586 EGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLP 625
E D MLVGDDPWHEFC +V++I I + ++VK + P S LP
Sbjct: 612 EDDTMLVGDDPWHEFCGIVRKINIYTPEEVKNLVPRSGLP 651
>gi|357445193|ref|XP_003592874.1| Auxin response factor [Medicago truncatula]
gi|355481922|gb|AES63125.1| Auxin response factor [Medicago truncatula]
Length = 671
Score = 607 bits (1564), Expect = e-171, Method: Compositional matrix adjust.
Identities = 346/641 (53%), Positives = 431/641 (67%), Gaps = 64/641 (9%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
MEQLEAS NQ L Q++P F LPSKILC+VVNIHL AE ETDEVYAQITLLPE Q+E T+
Sbjct: 50 MEQLEASMNQGLEQQMPSFNLPSKILCKVVNIHLRAEPETDEVYAQITLLPETDQSEVTS 109
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
PD + PR VHSF K LTASDTSTHGGFSVLR+HA +CLPPLDM Q P QELVA D
Sbjct: 110 PDDPLPEPPRCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATD 169
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
LHG EW F+HIFRGQPRRHLLTTGWS FV+SK+LVAGD F+FLRGENGEL VGVR L RQ
Sbjct: 170 LHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQ 229
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKF 238
QS+MPSSVISS SMHLGVLATASHA++T T+F V+YKPRT S+FI+S+NKYLEA N+K
Sbjct: 230 QSNMPSSVISSHSMHLGVLATASHAISTGTLFSVFYKPRTSRSEFIVSINKYLEARNHKL 289
Query: 239 AVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVS 297
+VGMR+KMRFEG++ PERRFSGT+VGVED S W DS+WRSLKVQWDEP+SI RPDRVS
Sbjct: 290 SVGMRFKMRFEGDEVPERRFSGTIVGVEDNKSSVWADSEWRSLKVQWDEPSSILRPDRVS 349
Query: 298 PWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSV 357
PWE+EP V++ N QP +NKR R PP+ LPS +T S+
Sbjct: 350 PWELEPLVSTPPAN-SQPT-QRNKRSR-----PPI-LPST--------------MTDSSL 387
Query: 358 TAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLT-SPRVKFSQQLF----QEAIDD 412
W + + F R G L SPR + F +
Sbjct: 388 QG---------IWKSP----ADSPPFPYRDPQHGRDLYPSPRFSSTATSFLGFGGNSPAS 434
Query: 413 NKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTE-TGTSCRLFGIELINHATSSAPS 471
NK++ W + +ST +P + LE E+G K + TG CRLFGI+L+ ++ +
Sbjct: 435 NKSM-YWSSRLENST----EPFSPVALE--ESGEKRQGTGNGCRLFGIQLLENSNAEESL 487
Query: 472 EKVPVSSLTTEGHIISTISAAADSD------GKSDIAKEFKEKKQEQVQVSPKESQSKQS 525
+ P+S + + ++ +D +SDI + + ++ SP+ESQS+Q
Sbjct: 488 QTAPLSGRVGDDRSVPSLDVESDQHSEPSNVNRSDIPSVSCDADKSCLR-SPQESQSRQI 546
Query: 526 CLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRT-KWEIVYTD 584
RS TKV MQG+AVGRA+DLT GY+ L+ +LEEMFDI+G+L T KW +VYTD
Sbjct: 547 -----RSCTKVHMQGMAVGRAVDLTRFDGYEDLLRKLEEMFDIEGELCGATKKWLVVYTD 601
Query: 585 DEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLP 625
+E DMM+VGDDPW EFC++V+++FI + ++VKK+SP LP
Sbjct: 602 NEDDMMMVGDDPWLEFCSVVRKMFIYTPEEVKKLSPKIGLP 642
>gi|115446715|ref|NP_001047137.1| Os02g0557200 [Oryza sativa Japonica Group]
gi|75225108|sp|Q6YVY0.1|ARFG_ORYSJ RecName: Full=Auxin response factor 7
gi|46390905|dbj|BAD16420.1| putative auxin-responsive factor (ARF1) [Oryza sativa Japonica
Group]
gi|113536668|dbj|BAF09051.1| Os02g0557200 [Oryza sativa Japonica Group]
gi|222623062|gb|EEE57194.1| hypothetical protein OsJ_07141 [Oryza sativa Japonica Group]
Length = 678
Score = 606 bits (1562), Expect = e-170, Method: Compositional matrix adjust.
Identities = 337/634 (53%), Positives = 425/634 (67%), Gaps = 48/634 (7%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
MEQLEAST+Q+L+Q +PLF LPSKILC+VVN+ L AE ++DEVYAQI L PE QNE T+
Sbjct: 53 MEQLEASTDQQLDQHLPLFNLPSKILCKVVNVELRAETDSDEVYAQIMLQPEADQNELTS 112
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
P P P + + VHSF K LTASDTSTHGGFSVLR+HA ECLPPLDM Q+ P QELVA+D
Sbjct: 113 PKPEPHEPEKCNVHSFCKTLTASDTSTHGGFSVLRRHAEECLPPLDMTQNPPWQELVARD 172
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
LHG EW F+HIFRGQPRRHLLTTGWS FV+SKRLVAGD F+FLRGENGEL VGVR L RQ
Sbjct: 173 LHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRLMRQ 232
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKF 238
++MPSSVISS SMHLGVLATASHA++T T+F V+YKPRTSQ F++S NKYLEA N+K
Sbjct: 233 LNNMPSSVISSHSMHLGVLATASHAISTGTLFSVFYKPRTSQSEFVVSANKYLEAKNSKI 292
Query: 239 AVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVS 297
+VGMR+KMRFEG+++PERRFSGT++GV S W +S WRSLKVQWDEP+ + RPDRVS
Sbjct: 293 SVGMRFKMRFEGDEAPERRFSGTIIGVGSMSTSPWANSDWRSLKVQWDEPSVVPRPDRVS 352
Query: 298 PWEIEPF-VASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLS 356
PWE+EP V+++ P+ P K RP S + P P SA Q + + L
Sbjct: 353 PWELEPLAVSNSQPSPQPPARNKRARPPASNSIAPELPPVFGLWKSSAESTQGFSFSGLQ 412
Query: 357 VTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNI 416
T E + S+ N + + TS V FS + A+ NK+
Sbjct: 413 RTQE---------------LYPSSPNPI--------FSTSLNVGFSTKNEPSAL-SNKHF 448
Query: 417 SAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTE-TGTSCRLFGIELINHATSSAPSEKVP 475
WP + + + + +V + +K E + CRLFGIE+ SSA P
Sbjct: 449 -YWPMRETRANSYSAS------ISKVPSEKKQEPSSAGCRLFGIEI-----SSAVEATSP 496
Query: 476 VSSLTTEGHIISTISAAADSDGKSDIAKEFK-EKKQEQVQVSPKESQSKQSCLTSNRSRT 534
+++++ G S A+SD S + K + + SP E+QS+Q RS T
Sbjct: 497 LAAVSGVGQDQPAASVDAESDQLSQPSHANKSDAPAASSEPSPHETQSRQV-----RSCT 551
Query: 535 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH-TRTKWEIVYTDDEGDMMLVG 593
KV MQG+AVGRA+DLT L GYD L +LEEMFDI+G+L + KW++VYTDDE DMMLVG
Sbjct: 552 KVIMQGMAVGRAVDLTRLHGYDDLRCKLEEMFDIQGELSASLKKWKVVYTDDEDDMMLVG 611
Query: 594 DDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMF 627
DDPW EFC+MVKRI+I + ++ K+++P SKLP+
Sbjct: 612 DDPWPEFCSMVKRIYIYTYEEAKQLTPKSKLPII 645
>gi|18412151|ref|NP_567119.1| auxin response factor 18 [Arabidopsis thaliana]
gi|46576636|sp|Q9C5W9.1|ARFR_ARATH RecName: Full=Auxin response factor 18
gi|12248007|gb|AAG50095.1|AF334717_1 auxin response factor ARF18 [Arabidopsis thaliana]
gi|16604603|gb|AAL24094.1| auxin response factor ARF18 [Arabidopsis thaliana]
gi|17979225|gb|AAL49929.1| AT3g61830/F15G16_220 [Arabidopsis thaliana]
gi|20259231|gb|AAM14331.1| putative auxin response factor protein [Arabidopsis thaliana]
gi|332646743|gb|AEE80264.1| auxin response factor 18 [Arabidopsis thaliana]
Length = 602
Score = 606 bits (1562), Expect = e-170, Method: Compositional matrix adjust.
Identities = 338/637 (53%), Positives = 413/637 (64%), Gaps = 102/637 (16%)
Query: 1 MEQLEASTNQELN-QRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPT 59
MEQL ASTNQ +N + IP+F LP KILCRV+++ L AE ETDEVYAQITL PE Q+EPT
Sbjct: 52 MEQLVASTNQGINSEEIPVFDLPPKILCRVLDVTLKAEHETDEVYAQITLQPEEDQSEPT 111
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
+ DP + + HSF K+LTASDTSTHGGFSVLRKHATECLP LDM Q+TPTQELV +
Sbjct: 112 SLDPPIVGPTKQEFHSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQATPTQELVTR 171
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLHG+EWRFKHIFRGQPRRHLLTTGWSTFV+SKRLVAGD FVFLRGENG+L VGVR LAR
Sbjct: 172 DLHGFEWRFKHIFRGQPRRHLLTTGWSTFVSSKRLVAGDAFVFLRGENGDLRVGVRRLAR 231
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFA 239
QS+MP+SVISSQSMHLGVLATASHAV T T+FVV+YKPR SQFI+ +NKY+EA+ + F+
Sbjct: 232 HQSTMPTSVISSQSMHLGVLATASHAVRTTTIFVVFYKPRISQFIVGVNKYMEAIKHGFS 291
Query: 240 VGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPW 299
+G R++MRFEGE+SPER F+GT+VG D S W SKWRSL+VQWDEP ++ RPD+VSPW
Sbjct: 292 LGTRFRMRFEGEESPERIFTGTIVGSGDLSSQWPASKWRSLQVQWDEPTTVQRPDKVSPW 351
Query: 300 EIEPFVAS---ATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLS 356
EIEPF+A+ +TP Q +K KR R +E P + P+ S +S L QS + S
Sbjct: 352 EIEPFLATSPISTP--AQQPQSKCKRSR-PIE-PSVKTPAPPSFLYS--LPQSQD----S 401
Query: 357 VTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNI 416
+ A K + + +SSN++F T
Sbjct: 402 INASLKLFQDP-SLERISGGYSSNNSFKPET----------------------------- 431
Query: 417 SAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPV 476
P P N S RLFG +L +++ + P +K P
Sbjct: 432 -------------PPPPTN----------------CSYRLFGFDLTSNSPAPIPQDKQP- 461
Query: 477 SSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKV 536
+ T AA K QE + + Q KQ ++RSRTKV
Sbjct: 462 ---------MDTCGAA---------------KCQEPITPTSMSEQKKQQ---TSRSRTKV 494
Query: 537 QMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDP 596
QMQG+AVGRA+DLT L YD LIDELEEMF+I+GQL R KW +V+TDDEGDMML GDDP
Sbjct: 495 QMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQGQLLARDKWIVVFTDDEGDMMLAGDDP 554
Query: 597 WHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGED 633
W+EFC M K+IFI SS +VKKM+ K+ S+E E+
Sbjct: 555 WNEFCKMAKKIFIYSSDEVKKMTTKLKISS-SLENEE 590
>gi|218190977|gb|EEC73404.1| hypothetical protein OsI_07659 [Oryza sativa Indica Group]
Length = 678
Score = 605 bits (1559), Expect = e-170, Method: Compositional matrix adjust.
Identities = 337/634 (53%), Positives = 425/634 (67%), Gaps = 48/634 (7%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
MEQLEAST+Q+L+Q +PLF LPSKILC+VVN+ L AE ++DEVYAQI L PE QNE T+
Sbjct: 53 MEQLEASTDQQLDQHLPLFNLPSKILCKVVNVELRAETDSDEVYAQIMLQPEADQNELTS 112
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
P P P + + VHSF K LTASDTSTHGGFSVLR+HA ECLPPLDM Q+ P QELVA+D
Sbjct: 113 PKPEPHEPEKCNVHSFCKTLTASDTSTHGGFSVLRRHAEECLPPLDMTQNPPWQELVARD 172
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
LHG EW F+HIFRGQPRRHLLTTGWS FV+SKRLVAGD F+FLRGENGEL VGVR L RQ
Sbjct: 173 LHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRLMRQ 232
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKF 238
++MPSSVISS SMHLGVLATASHA++T T+F V+YKPRTSQ F++S NKYLEA N+K
Sbjct: 233 LNNMPSSVISSHSMHLGVLATASHAISTGTLFSVFYKPRTSQSEFVVSANKYLEAKNSKI 292
Query: 239 AVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVS 297
+VGMR+KMRFEG+++PERRFSGT++GV S W +S WRSLKVQWDEP+ + RPDRVS
Sbjct: 293 SVGMRFKMRFEGDEAPERRFSGTIIGVGSMSTSPWANSDWRSLKVQWDEPSVVPRPDRVS 352
Query: 298 PWEIEPF-VASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLS 356
PWE+EP V+++ P+ P K RP S + P P SA Q + + L
Sbjct: 353 PWELEPLAVSNSQPSPQPPARNKRARPPASSSIAPELPPVFGLWKSSAESTQGFSFSGLQ 412
Query: 357 VTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNI 416
T E + S+ N + + TS V FS + A+ NK+
Sbjct: 413 RTQE---------------LYPSSPNPI--------FSTSLNVGFSTKNEPSAL-SNKHF 448
Query: 417 SAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTE-TGTSCRLFGIELINHATSSAPSEKVP 475
WP + + + + +V + +K E + CRLFGIE+ SSA P
Sbjct: 449 -YWPMRETRADSYSAS------ISKVPSEKKQEPSSAGCRLFGIEI-----SSAVEATSP 496
Query: 476 VSSLTTEGHIISTISAAADSDGKSDIAKEFK-EKKQEQVQVSPKESQSKQSCLTSNRSRT 534
+++++ G S A+SD S + K + + SP E+QS+Q RS T
Sbjct: 497 LAAVSGVGQDQLAASVDAESDQLSQPSHANKSDAPAASSEPSPHETQSRQV-----RSCT 551
Query: 535 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH-TRTKWEIVYTDDEGDMMLVG 593
KV MQG+AVGRA+DLT L GYD L +LEEMFDI+G+L + KW++VYTDDE DMMLVG
Sbjct: 552 KVIMQGMAVGRAVDLTRLHGYDDLRCKLEEMFDIQGELSASLKKWKVVYTDDEDDMMLVG 611
Query: 594 DDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMF 627
DDPW EFC+MVKRI+I + ++ K+++P SKLP+
Sbjct: 612 DDPWPEFCSMVKRIYIYTYEEAKQLTPKSKLPII 645
>gi|379323222|gb|AFD01310.1| auxin response factor 11 [Brassica rapa subsp. pekinensis]
Length = 584
Score = 604 bits (1557), Expect = e-170, Method: Compositional matrix adjust.
Identities = 342/629 (54%), Positives = 413/629 (65%), Gaps = 106/629 (16%)
Query: 1 MEQLEASTNQEL-NQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPT 59
MEQL ASTNQ + ++ IP+F LP KILCRV+N+ L AE ETDEVYAQITL PE Q+EPT
Sbjct: 39 MEQLVASTNQRVVDKDIPVFNLPPKILCRVLNVMLKAEHETDEVYAQITLQPEEDQSEPT 98
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
+ DP + + V SF K+LTASDTSTHGGFSVLRKHATECLPPLDM Q+TPTQELVA+
Sbjct: 99 SLDPPLTEPAKQTVDSFVKILTASDTSTHGGFSVLRKHATECLPPLDMTQATPTQELVAR 158
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG-ENGELHVGVRCLA 178
DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGD FVFLRG + G+L VGVR LA
Sbjct: 159 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGHQTGDLRVGVRRLA 218
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKF 238
+QQS+MP+SVISSQSMHLGVLATASHA T TMFVV YKPR SQFIIS+NKY+ A+ F
Sbjct: 219 KQQSTMPASVISSQSMHLGVLATASHAFNTTTMFVVLYKPRISQFIISVNKYMAAMKKGF 278
Query: 239 AVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSP 298
+GMR++MRFEGE+SPER F+GT+VG D SP W SKWRSL+VQWDE +++ RP++VSP
Sbjct: 279 GIGMRFRMRFEGEESPERIFTGTIVGTGDLSPQWPASKWRSLQVQWDESSTVQRPNKVSP 338
Query: 299 WEIEPFVASA-TPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSV 357
WEIEPF+ S T + QP +K+KR R P+D PS + S
Sbjct: 339 WEIEPFLPSTLTTSPTQP-YSKSKRSR------PID-PSVSEITGSP------------- 377
Query: 358 TAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQE-AIDDNKNI 416
VA SNF+SR E SP +K LFQ+ + + N N
Sbjct: 378 ----------VA-----------SNFLSRFPKSHE--PSPSLKL---LFQDPSSERNSNK 411
Query: 417 SAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINH-ATSSAPSEKVP 475
+ PA S CRLFG +L + A++ P++K
Sbjct: 412 TEAPATS-----------------------------CCRLFGFDLKSKPASAPNPNDKQQ 442
Query: 476 VSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTK 535
+ IS +++ G + K Q+ P S+ ++ +S RSRTK
Sbjct: 443 L------------ISVDSNNTGSA--------KCQD-----PNSSKDQKQQTSSTRSRTK 477
Query: 536 VQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDD 595
VQMQG AVGRA+DLT L YD LI ELE+MF+I+G+L T+ KW IV+TDDEGDMMLVGDD
Sbjct: 478 VQMQGTAVGRAVDLTLLRSYDELIRELEKMFEIEGELRTKDKWAIVFTDDEGDMMLVGDD 537
Query: 596 PWHEFCNMVKRIFICSSQDVKKMSPGSKL 624
PW EFC M K++FI SS +VKKMS S L
Sbjct: 538 PWDEFCKMAKKLFIYSSDEVKKMSSKSLL 566
>gi|356560035|ref|XP_003548301.1| PREDICTED: auxin response factor 1-like [Glycine max]
Length = 665
Score = 602 bits (1553), Expect = e-169, Method: Compositional matrix adjust.
Identities = 344/640 (53%), Positives = 430/640 (67%), Gaps = 59/640 (9%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
MEQLEAS NQ L Q++P F LPSKILC+VVN+HL AE ETDEVYAQITLLPE Q+E T+
Sbjct: 43 MEQLEASMNQGLEQQMPSFNLPSKILCKVVNVHLRAEPETDEVYAQITLLPEADQSEVTS 102
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
PD +SPR VHSF K LTASDTSTHGGFSVLR+HA +CLPPLDM Q P QELVA D
Sbjct: 103 PDDPLPESPRCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATD 162
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
LHG EW F+HIFRGQPRRHLLTTGWS FV+SK+LVAGD F+FLRGENGEL VGVR L RQ
Sbjct: 163 LHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQ 222
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKF 238
S+MPSSVISS SMHLGVLATASHA+AT T+F V+YKPRT S+FI+S+NKYLEA ++K
Sbjct: 223 HSNMPSSVISSHSMHLGVLATASHAIATGTLFSVFYKPRTSRSEFIVSVNKYLEAQSHKL 282
Query: 239 AVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVS 297
+VGMR+KMRFEG++ PERRFSGT+VGVED S W DS+WRSLKVQWDEP+SI RPDRVS
Sbjct: 283 SVGMRFKMRFEGDEVPERRFSGTIVGVEDNKSLVWADSEWRSLKVQWDEPSSILRPDRVS 342
Query: 298 PWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSV 357
PWE+EP V S P QP +NKR R + +P L S+ W + + +
Sbjct: 343 PWELEPLV-SNPPTNSQPS-QRNKRSRPPI-LPSTMLDSSLQGVWKSPVESA------PF 393
Query: 358 TAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNIS 417
+ D H D ++NF S + F NK+I
Sbjct: 394 SYRD---------HQHGRDVYPSTNFNSTATG--------FLGFGGN----CSASNKSI- 431
Query: 418 AWPAHSGHSTPHPSKPNNDTLLEQVETGRKTE-TGTSCRLFGIELINHATSSAPSEKVPV 476
W + +ST S + E G K + T CRLFGI+L H S++ E +P+
Sbjct: 432 YWSSRIENSTESFSP------VAVKEFGEKRQGTANGCRLFGIQL--HDNSNSNEESLPM 483
Query: 477 SSLT---TEGHIISTISAAADSD------GKSDIAKEFKEKKQEQVQVSPKESQSKQSCL 527
SL+ + ++ ++ A +D +SD + ++ ++ SP+ESQS+Q
Sbjct: 484 VSLSGRVGDDGLLPSLDAESDQHSEPSNVNRSDFPSVSCDAEKSCLR-SPQESQSRQI-- 540
Query: 528 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDE 586
RS TKV MQG+AVGRA+DLT GY+ L+ +LEEMFDI G+L TK W++VYTD+E
Sbjct: 541 ---RSCTKVHMQGMAVGRAVDLTRFDGYEDLLRKLEEMFDINGELCGSTKEWQVVYTDNE 597
Query: 587 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPM 626
DMM+VGDDPW EFC++V++IFI ++++VKK+SP LP+
Sbjct: 598 DDMMMVGDDPWLEFCSIVRKIFIYTAEEVKKLSPKIGLPI 637
>gi|356520147|ref|XP_003528726.1| PREDICTED: auxin response factor 1-like [Glycine max]
Length = 674
Score = 602 bits (1552), Expect = e-169, Method: Compositional matrix adjust.
Identities = 339/653 (51%), Positives = 436/653 (66%), Gaps = 82/653 (12%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
MEQLEAS + L Q++P F LPSKILC+VVN+HL AE ETDEVYAQITLLPE Q+E T+
Sbjct: 49 MEQLEASMYEGLEQQMPSFNLPSKILCKVVNVHLRAEPETDEVYAQITLLPEADQSEVTS 108
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
PD +SPR K+HSF K LTASDTSTHGGFSVLR+HA +CLPPLDM+Q P QELVA D
Sbjct: 109 PDDPLPESPRVKIHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATD 168
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
LHG EW F+HIFRGQP+RHLLTTGWS FV+SK+L AGD F+FLRGENGEL VGVR + RQ
Sbjct: 169 LHGNEWHFRHIFRGQPKRHLLTTGWSVFVSSKKLAAGDAFIFLRGENGELRVGVRRVMRQ 228
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKF 238
QS++PSSVISS SMHLGVLATASHA+AT T+F V+YKPRT S+FI+S+NKYLE ++K
Sbjct: 229 QSNVPSSVISSHSMHLGVLATASHAIATGTLFSVFYKPRTSRSEFIVSVNKYLEVQSHKL 288
Query: 239 AVGMRYKMRFEGEDSPERRFSGTVVGVED--FSPHWKDSKWRSLKVQWDEPASITRPDRV 296
+VGMR+KMRFEG++ PERRFSGT+VGV D S W DS+WRSLKVQWDEP+SI RPDRV
Sbjct: 289 SVGMRFKMRFEGDEIPERRFSGTIVGVGDNKSSSVWPDSEWRSLKVQWDEPSSILRPDRV 348
Query: 297 SPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLS 356
S WE+EP V++ N QP +NKR R PL LPS
Sbjct: 349 SSWELEPLVSTTLAN-SQPT-QRNKRAR------PLILPS-------------------- 380
Query: 357 VTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNI 416
T D + W K S S++ ++ Q G + P KF N +
Sbjct: 381 -TMPDSSLQG--IW--KSSVESTSFSYCDPQQGRGLY---PSPKF-----------NSSA 421
Query: 417 SAWPAHSGHSTPHPSKPNNDTL---------LEQV------ETGRKTE-TGTSCRLFGIE 460
+ + SG+S+ P+N ++ LE + E G K + TG CRLFGI+
Sbjct: 422 TNFIGFSGNSS--VGSPSNKSIYWSNRMENNLESISAIALKEAGEKRQGTGNGCRLFGIQ 479
Query: 461 LINHATSSAPSEKVPVSSLTTEGHIISTISAAAD------SDGKSDIAKEFKEKKQEQVQ 514
L+ ++ + + V +S + + ++ A +D + +SDI + ++ +Q
Sbjct: 480 LLENSNAEGNLQTVTLSGRVGDDRSVPSLDAESDQHSEPSNANRSDIPSVSCDAEKSCLQ 539
Query: 515 VSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL-H 573
SP+ESQSKQ RS TKV MQG+AVGRA+DLT GY+ L+ +LE+MF+IK +L
Sbjct: 540 -SPQESQSKQI-----RSCTKVHMQGMAVGRAVDLTRFDGYEDLLRKLEDMFNIKTELCG 593
Query: 574 TRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPM 626
+ KW++VYTD+E DMM+VGDDPW EFC++V++IFI ++++VKK+SP +LPM
Sbjct: 594 SLKKWQVVYTDNEDDMMMVGDDPWDEFCSVVRKIFIYTAEEVKKLSPKIRLPM 646
>gi|224129786|ref|XP_002328802.1| predicted protein [Populus trichocarpa]
gi|222839100|gb|EEE77451.1| predicted protein [Populus trichocarpa]
Length = 662
Score = 602 bits (1552), Expect = e-169, Method: Compositional matrix adjust.
Identities = 338/631 (53%), Positives = 424/631 (67%), Gaps = 58/631 (9%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
MEQLEAS +Q + ++PLF LPSKILC+VVN+ AE ETDEVYAQITLLPEP Q+E T+
Sbjct: 53 MEQLEASMHQGMEPQMPLFNLPSKILCKVVNVQRRAEPETDEVYAQITLLPEPDQSEVTS 112
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
PDP + R VHSF K LTASDTSTHGGFSVLR+HA +CLPPLDM+Q P QELVA D
Sbjct: 113 PDPPLPEPERCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATD 172
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
LHG EW F+HIFRGQPRRHLLTTGWS FV+SK+LVAGD F+FLRGENGEL VGVR L RQ
Sbjct: 173 LHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQ 232
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKF 238
Q++MPSSVISSQSMHLGVLATASHA+AT T+F V+YKPRT S+FI+SLNKYLE N+K
Sbjct: 233 QTNMPSSVISSQSMHLGVLATASHAIATGTLFSVFYKPRTSRSEFIVSLNKYLEVRNHKL 292
Query: 239 AVGMRYKMRFEGEDSPERRFSGTVVGVED-FSPHWKDSKWRSLKVQWDEPASITRPDRVS 297
+VGMR+KMRFEGE+ PERRFSGT+VGV D S W DS WRSLKVQWDEP+SI RP+RVS
Sbjct: 293 SVGMRFKMRFEGEEVPERRFSGTIVGVGDNISSGWADSDWRSLKVQWDEPSSIMRPERVS 352
Query: 298 PWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSV 357
WE+EP VA+ TP+ QPV +NKR R P +PS + +L+ L +
Sbjct: 353 HWELEPLVAT-TPSNSQPV-QRNKRAR------PYVIPSPTA-----------DLSALGM 393
Query: 358 TAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNIS 417
W S S++ +Q + +SP + ++ N ++
Sbjct: 394 ------------W---KSPVESSALSYGDSQRGRDLYSSPNFSTTAKVNSLGFRGNSQVA 438
Query: 418 AWPAHSGHSTPHPSKPNNDTLLEQV--ETG-RKTETGTSCRLFGIELINHATSSAPSEKV 474
+ +H+ P+ + D+ V ++G R+ TG +LFGI+L+ ++ + S
Sbjct: 439 S-VSHNSMHWPNRVESVTDSFAPVVNKDSGERRQGTGIGYKLFGIQLVENSNTEGTS--- 494
Query: 475 PVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRT 534
PV T + + +S A+SD S+ K QE QS+Q RS T
Sbjct: 495 PVVVSGTVVNDLPVLSLEAESDQHSEPEKSCLRSSQEL--------QSRQI-----RSCT 541
Query: 535 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRT-KWEIVYTDDEGDMMLVG 593
KV MQGVAVGRA+DLT Y+ L+ +LEEMFDI+G+L T KW++VYTD+E DMM VG
Sbjct: 542 KVHMQGVAVGRAVDLTQFKRYEDLLRKLEEMFDIEGELSGSTKKWQVVYTDNEDDMMKVG 601
Query: 594 DDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 624
DDPW+EFC MVK+IFI +S++VK++SP KL
Sbjct: 602 DDPWNEFCGMVKKIFIYTSEEVKRLSPKIKL 632
>gi|242065406|ref|XP_002453992.1| hypothetical protein SORBIDRAFT_04g022830 [Sorghum bicolor]
gi|241933823|gb|EES06968.1| hypothetical protein SORBIDRAFT_04g022830 [Sorghum bicolor]
Length = 672
Score = 601 bits (1550), Expect = e-169, Method: Compositional matrix adjust.
Identities = 340/644 (52%), Positives = 428/644 (66%), Gaps = 68/644 (10%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
MEQLEAST+Q+L+Q +PLF LP KILC+VVN+ L AE ++DEVYAQI L PE QNEPT+
Sbjct: 47 MEQLEASTDQQLDQHLPLFNLPPKILCKVVNVELRAETDSDEVYAQIMLQPEAEQNEPTS 106
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
PD P + R VHSF K LTASDTSTHGGFSVLR+HA ECLP LDM Q+ P QELVAKD
Sbjct: 107 PDAEPPEPERCNVHSFCKTLTASDTSTHGGFSVLRRHAEECLPQLDMTQNPPWQELVAKD 166
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
LHG EW F+HIFRGQPRRHLLTTGWS FV+SKRLVAGD F+FLRGENGEL VGVR L RQ
Sbjct: 167 LHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRLMRQ 226
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKF 238
++MPSSVISS SMHLGVLATASHA++T T+F V+YKPRT S+F++S+NKYLEA N+K
Sbjct: 227 LNNMPSSVISSHSMHLGVLATASHAISTGTLFSVFYKPRTSRSEFVVSVNKYLEAKNHKM 286
Query: 239 AVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPH----WKDSKWRSLKVQWDEPASITRPD 294
+VGMR+KMRFEG++SPERRFSGT++G+ + W +S+WRSLKVQWDEP++I RPD
Sbjct: 287 SVGMRFKMRFEGDESPERRFSGTIIGLGSMPANSTSPWANSEWRSLKVQWDEPSAILRPD 346
Query: 295 RVSPWEIEPFVASATPNLVQPVLAKNKR------PRLSMEVPPLDLPSAASAPWS--ARL 346
RVSPWE+EP A+ P QP L +NKR P ++ E+PP+ W A
Sbjct: 347 RVSPWELEPLDAT-NPQPPQPPL-RNKRARPPASPSIAPELPPV------FGFWKSPAEP 398
Query: 347 AQSHNLTQLSVTAEDKRIDNHVAWH-HKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQL 405
AQ+ + + L T E +H + +S FSS+ N V F+ +
Sbjct: 399 AQAFSFSGLQRTQE--------LYHSNPNSIFSSSLN----------------VGFNSK- 433
Query: 406 FQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTS-CRLFGIELINH 464
E N N W + + + N + T +K E+ TS CRLFGIE+
Sbjct: 434 -NERSTPNNNHLYWTMRETRTESYSASIN------KAPTEKKQESATSGCRLFGIEI--- 483
Query: 465 ATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQ 524
SA S V V+S+ + ++ +D + A + + + SP E++S+Q
Sbjct: 484 --GSAVSPVVTVASVGQDPPPALSVDVESDQLSQPSHANK-TDAPAASSERSPNETESRQ 540
Query: 525 SCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRT-KWEIVYT 583
RS TKV MQG+AVGRA+DLT L GYD L +LEEMFDI G+L KW++VYT
Sbjct: 541 V-----RSCTKVIMQGMAVGRAVDLTRLDGYDDLHRKLEEMFDIHGELSANLRKWKVVYT 595
Query: 584 DDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMF 627
DDE DMMLVGDDPW+EFC MVKRI+I S ++ K ++P +KLP+
Sbjct: 596 DDEDDMMLVGDDPWNEFCRMVKRIYIYSYEEAKSLTPKAKLPVI 639
>gi|225465265|ref|XP_002268348.1| PREDICTED: auxin response factor 1 [Vitis vinifera]
gi|297739458|emb|CBI29640.3| unnamed protein product [Vitis vinifera]
Length = 678
Score = 600 bits (1548), Expect = e-169, Method: Compositional matrix adjust.
Identities = 346/642 (53%), Positives = 432/642 (67%), Gaps = 62/642 (9%)
Query: 1 MEQLEAST-NQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPT 59
MEQLEAST +Q L+Q++P F LPSKILC+VV++ L AE ETDEVYAQ+TLLPEP Q+E T
Sbjct: 52 MEQLEASTTHQGLDQQMPSFNLPSKILCKVVHVQLRAEPETDEVYAQVTLLPEPDQSEIT 111
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
+PDP + R VHSF K LTASDTSTHGGFSVLR+HA +CLPPLDM+Q P QELVA
Sbjct: 112 SPDPPLPEPQRCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVAA 171
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLHG EW F+HIFRGQPRRHLLTTGWS FV+SK+LVAGD F+FLRGENGEL VGVR L R
Sbjct: 172 DLHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMR 231
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNK 237
Q S+MPSSVISS SMHLGVLATASHA++T T+F V+YKPRT S+FI+SLNKYLEA N+K
Sbjct: 232 QLSNMPSSVISSHSMHLGVLATASHAISTGTLFSVFYKPRTSRSEFIVSLNKYLEARNHK 291
Query: 238 FAVGMRYKMRFEGEDSPERRFSGTVVGVED--FSPHWKDSKWRSLKVQWDEPASITRPDR 295
+VGMR+KMRFEGE+ PERRFSGT+VGV D S W DS+WRSLKVQWDEPASI RP+R
Sbjct: 292 LSVGMRFKMRFEGEEVPERRFSGTIVGVGDKNTSSGWADSEWRSLKVQWDEPASIFRPER 351
Query: 296 VSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQL 355
VS WE+EP VA+A P +QP +NKR R PP+ LPSA + +L+ L
Sbjct: 352 VSAWELEPLVAAAAPTNLQPA-QRNKRAR-----PPV-LPSA-----------TPDLSVL 393
Query: 356 SVTAEDKRIDNHVAWH--HKHSDFSSNSNFMSRTQS---DGEWLTSPRVKFSQQLFQEAI 410
+ + + H+ D + F S T++ +SP S ++
Sbjct: 394 GMWKSSVESPSGFPYCDPHRGRDLYPSPKFSSITKTNSFSFSGNSSPAAVSSNSMYWSNR 453
Query: 411 DDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHAT--SS 468
+ S PA + S E R T G+ CRLFG +L++++T +
Sbjct: 454 METATESFAPAVNKESG---------------EKRRDT--GSGCRLFGFQLLDNSTLEET 496
Query: 469 AP----SEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQ 524
P E PV SL E S + + +SDI E + ++ SP+ESQS+Q
Sbjct: 497 LPVLTVGEDQPVPSLDVE----SDQHSEPSNINRSDIPSVSCEPDKLSLR-SPQESQSRQ 551
Query: 525 SCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYT 583
RS TKV MQG+AVGRA+DLT Y+ L+ +LEEMFDI+G+L T W++VYT
Sbjct: 552 I-----RSCTKVHMQGIAVGRAVDLTRFDRYEDLLKKLEEMFDIQGELCGLTSIWQVVYT 606
Query: 584 DDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLP 625
DDE DMM+VGDDPW EFC+MV++IFI ++++VK++SP KLP
Sbjct: 607 DDEDDMMMVGDDPWLEFCSMVRKIFIYTAEEVKRLSPKIKLP 648
>gi|140053546|gb|ABO80473.1| AUX/IAA protein; Transcriptional factor B3; Auxin response factor
[Medicago truncatula]
Length = 670
Score = 600 bits (1547), Expect = e-169, Method: Compositional matrix adjust.
Identities = 346/645 (53%), Positives = 430/645 (66%), Gaps = 68/645 (10%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
MEQLEAS NQ L Q++P F LPSKILC+VVNIHL AE ETDEVYAQITLLPE Q+E T+
Sbjct: 45 MEQLEASMNQGLEQQMPSFNLPSKILCKVVNIHLRAEPETDEVYAQITLLPETDQSEVTS 104
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
PD + PR VHSF K LTASDTSTHGGFSVLR+HA +CLPPLDM Q P QELVA D
Sbjct: 105 PDDPLPEPPRCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATD 164
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLR----GENGELHVGVRC 176
LHG EW F+HIFRGQPRRHLLTTGWS FV+SK+LVAGD F+FLR GENGEL VGVR
Sbjct: 165 LHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRQVVLGENGELRVGVRR 224
Query: 177 LARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV 234
L RQQS+MPSSVISS SMHLGVLATASHA++T T+F V+YKPRT S+FI+S+NKYLEA
Sbjct: 225 LMRQQSNMPSSVISSHSMHLGVLATASHAISTGTLFSVFYKPRTSRSEFIVSINKYLEAR 284
Query: 235 NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRP 293
N+K +VGMR+KMRFEG++ PERRFSGT+VGVED S W DS+WRSLKVQWDEP+SI RP
Sbjct: 285 NHKLSVGMRFKMRFEGDEVPERRFSGTIVGVEDNKSSVWADSEWRSLKVQWDEPSSILRP 344
Query: 294 DRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLT 353
DRVSPWE+EP V++ N QP +NKR R PP+ LPS
Sbjct: 345 DRVSPWELEPLVSTPPAN-SQPT-QRNKRSR-----PPI-LPS----------------- 379
Query: 354 QLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLT-SPRVKFSQQLF----QE 408
T D + W + + F R G L SPR + F
Sbjct: 380 ----TMTDSSLQG--IWKSP----ADSPPFPYRDPQHGRDLYPSPRFSSTATSFLGFGGN 429
Query: 409 AIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTE-TGTSCRLFGIELINHATS 467
+ NK++ W + +ST +P + LE E+G K + TG CRLFGI+L+ ++ +
Sbjct: 430 SPASNKSM-YWSSRLENST----EPFSPVALE--ESGEKRQGTGNGCRLFGIQLLENSNA 482
Query: 468 SAPSEKVPVSSLTTEGHIISTISAAADSD------GKSDIAKEFKEKKQEQVQVSPKESQ 521
+ P+S + + ++ +D +SDI + + ++ SP+ESQ
Sbjct: 483 EESLQTAPLSGRVGDDRSVPSLDVESDQHSEPSNVNRSDIPSVSCDADKSCLR-SPQESQ 541
Query: 522 SKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRT-KWEI 580
S+Q RS TKV MQG+AVGRA+DLT GY+ L+ +LEEMFDI+G+L T KW +
Sbjct: 542 SRQI-----RSCTKVHMQGMAVGRAVDLTRFDGYEDLLRKLEEMFDIEGELCGATKKWLV 596
Query: 581 VYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLP 625
VYTD+E DMM+VGDDPW EFC++V+++FI + ++VKK+SP LP
Sbjct: 597 VYTDNEDDMMMVGDDPWLEFCSVVRKMFIYTPEEVKKLSPKIGLP 641
>gi|449449170|ref|XP_004142338.1| PREDICTED: auxin response factor 1-like [Cucumis sativus]
Length = 739
Score = 599 bits (1545), Expect = e-168, Method: Compositional matrix adjust.
Identities = 348/660 (52%), Positives = 435/660 (65%), Gaps = 72/660 (10%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
MEQLEAS +Q L Q++P F LPSKILC+VVN+ L AE +TDEVYAQITLLPE +QNE T+
Sbjct: 114 MEQLEASMHQGLEQQMPSFNLPSKILCKVVNVVLRAESDTDEVYAQITLLPESNQNEVTS 173
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
PDP + R VHSF K LTASDTSTHGGFSVLR+HA +CLPPLDM+Q P QELVA D
Sbjct: 174 PDPPLPEPTRCNVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATD 233
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
LHG +W F+HIFRGQPRRHLLTTGWS FV+SK+LVAGD F+FLRGENGEL VGVR L RQ
Sbjct: 234 LHGNQWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQ 293
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKF 238
++MPSSVISS SMHLGVLATASHA++T T+F V+YKPRTS+ F++SLNKYLEA N+K
Sbjct: 294 LNNMPSSVISSHSMHLGVLATASHAISTGTLFSVFYKPRTSRSTFLVSLNKYLEAQNHKL 353
Query: 239 AVGMRYKMRFEGEDSPERRFSGTVVGVED-FSPHWKDSKWRSLKVQWDEPASITRPDRVS 297
+VGMR+KMRFEGE+ PER FSGT+VG+ D SP W +S+WRSLKVQWDEP+SI RPD+VS
Sbjct: 354 SVGMRFKMRFEGEEVPERSFSGTIVGLGDNASPGWANSEWRSLKVQWDEPSSILRPDKVS 413
Query: 298 PWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSV 357
WE+EP VAS P QP +NKRPR P LPS S+P + L + S
Sbjct: 414 AWELEPLVAS-NPLSTQPT-QRNKRPR------PTVLPS--SSPDATVLGGWKPTVESST 463
Query: 358 --TAEDKRIDNHVAWHHKHSDFSSNS------NFMSRTQSDGEWLTSPRVKFSQQLFQEA 409
AE +R + + K S +SNS + + S+ W + RV
Sbjct: 464 FSYAEPQRGRDLYS-SPKFSTAASNSLGFNANSSLGAVSSNNYWCNTNRV---------- 512
Query: 410 IDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSA 469
+NI +H + P VE + + G CRLFGI+L+ ++
Sbjct: 513 ----ENIMDPSSHGANREP-------------VEKKQNSRNG--CRLFGIQLLGNSNV-- 551
Query: 470 PSEKVPVSS--LTTEGHIISTISAAADSDG------KSDIAKEFKEKKQEQVQVSPKESQ 521
E PVS+ + E ++ I + +SDI + +SP ESQ
Sbjct: 552 -DEASPVSTPKMGGEDRLVPPIDTDFEQHSEPSNIHRSDIPS-ISCDADKSCLISPLESQ 609
Query: 522 SKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL-HTRTKWEI 580
S+Q RS TKV MQG+AVGRA+DLT YD L+ +LEEMFDI+G+L + KW++
Sbjct: 610 SRQI-----RSCTKVHMQGIAVGRAVDLTRFNQYDDLLRKLEEMFDIEGELCGSLKKWQV 664
Query: 581 VYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGEDILLSSDS 640
VYTDDE DMMLVGDDPW+EFC+MV++IFI ++++VK++SP KLP+ GE L DS
Sbjct: 665 VYTDDEDDMMLVGDDPWNEFCSMVRKIFIYTTEEVKRLSPKIKLPL---GGEAKLSKPDS 721
>gi|356543365|ref|XP_003540131.1| PREDICTED: auxin response factor 1-like [Glycine max]
Length = 665
Score = 598 bits (1542), Expect = e-168, Method: Compositional matrix adjust.
Identities = 347/645 (53%), Positives = 431/645 (66%), Gaps = 69/645 (10%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
MEQLEAS NQ L Q++P F LPSKILC+VVN+HL AE ETDEVYAQITLLPE Q+E T+
Sbjct: 43 MEQLEASMNQGLEQQMPSFNLPSKILCKVVNVHLRAEPETDEVYAQITLLPEADQSEVTS 102
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
PD +SPR VHSF K LTASDTSTHGGFSVLR+HA +CLPPLDM Q P QELVA D
Sbjct: 103 PDDPLPESPRCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATD 162
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
LHG EW F+HIFRGQPRRHLLTTGWS FV+SK+LVAGD F+FLRGENGEL VGVR L RQ
Sbjct: 163 LHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQ 222
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKF 238
QS+MPSSVISS SMHLGVLATASHA+AT T+F V+YKPRTS +FI+S+NKYLEA ++K
Sbjct: 223 QSNMPSSVISSHSMHLGVLATASHAIATGTLFSVFYKPRTSRSEFIVSVNKYLEARSHKL 282
Query: 239 AVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVS 297
+VGMR+KMRFEG++ PERRFSGT+VGV D S W DS+WRSLKVQWDEP+SI RPDRVS
Sbjct: 283 SVGMRFKMRFEGDEVPERRFSGTIVGVGDNKSSVWADSEWRSLKVQWDEPSSILRPDRVS 342
Query: 298 PWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLP-----SAASAPWSARLAQSHNL 352
PWE+EP V S P QP +NKR R PP+ LP S+ W + +
Sbjct: 343 PWELEPLV-STPPTNPQPS-QRNKRSR-----PPI-LPSTMPDSSLQGVWKSPVE----- 389
Query: 353 TQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDD 412
+A D H D ++NF S + F +
Sbjct: 390 -----SAPFSYCD-----HQHGRDVYPSTNFNSTATG--------FLGFGGNCYA----S 427
Query: 413 NKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTE-TGTSCRLFGIELINHATSSAPS 471
NK+I W + +ST + + + E G K + T CRLF I+L H S++
Sbjct: 428 NKSI-YWSSRMENST------ESFSPVALKEFGEKRQGTANGCRLFRIQL--HDNSNSNE 478
Query: 472 EKVPVSSLTTE-GHIISTISAAADSD--------GKSDIAKEFKEKKQEQVQVSPKESQS 522
E +P+ +L+ G S A+SD +SDI + ++ ++ SP+ESQS
Sbjct: 479 ESLPMVTLSGRMGDDGPLPSLDAESDQHSEPSNVNRSDIPSVSCDAEKSCLR-SPQESQS 537
Query: 523 KQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRT-KWEIV 581
+Q RS TKV MQG+AVGRA+DLT GY+ L+ +LEEMFDI G+L T KW++V
Sbjct: 538 RQI-----RSCTKVHMQGMAVGRAVDLTRFDGYEDLLRKLEEMFDITGELCGSTKKWQVV 592
Query: 582 YTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPM 626
YTD+E DMM+VGDDPW EFC++V++IFI ++++V+K+SP LP+
Sbjct: 593 YTDNEDDMMMVGDDPWLEFCSIVRKIFIYTAEEVRKLSPKIGLPI 637
>gi|255573832|ref|XP_002527835.1| Auxin response factor, putative [Ricinus communis]
gi|223532759|gb|EEF34538.1| Auxin response factor, putative [Ricinus communis]
Length = 671
Score = 597 bits (1538), Expect = e-168, Method: Compositional matrix adjust.
Identities = 334/640 (52%), Positives = 434/640 (67%), Gaps = 57/640 (8%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
MEQLEAS +Q L ++P F LPSKILC+VVN+ AE ETDEVYAQITLLP+P Q+E T+
Sbjct: 45 MEQLEASMHQGLEPQMPSFDLPSKILCKVVNVQRKAEPETDEVYAQITLLPDPDQSEVTS 104
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
PD + R VHSF K LTASDTSTHGGFSVLR+HA +CLPPLDM+Q P QELVA D
Sbjct: 105 PDTPLPEPERCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATD 164
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
LHG +W F+HIFRGQPRRHLLTTGWS FV+SK+LVAGD F+FLRGENGEL VGVR L RQ
Sbjct: 165 LHGNQWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQ 224
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKF 238
Q++MPSSVISSQSMHLGVLATASHA+AT T+F V+YKPRT S+FI+S+NKYLEA ++K
Sbjct: 225 QTNMPSSVISSQSMHLGVLATASHAIATGTLFSVFYKPRTSRSEFIVSVNKYLEARSHKL 284
Query: 239 AVGMRYKMRFEGEDSPERRFSGTVVGVED-FSPHWKDSKWRSLKVQWDEPASITRPDRVS 297
+VGMR+KMRFEGE+ PERRFSGT+VGV D S W DS+WRSLKVQWDEP+SI RPDRVS
Sbjct: 285 SVGMRFKMRFEGEEVPERRFSGTIVGVGDNVSSGWADSEWRSLKVQWDEPSSILRPDRVS 344
Query: 298 PWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAAS-APWSARLAQSHNLTQLS 356
WE+EP VA+ TP+ QPV +NKR R S+ D+ S P + A S+ Q
Sbjct: 345 SWELEPLVAT-TPSNSQPV-QRNKRARPSVLPSTPDISSLGMWKPQTESTAFSYGDFQ-- 400
Query: 357 VTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNI 416
+ D + NF + +++ + FS N +
Sbjct: 401 ----------------RGRDLYPSHNFSTSAKTN-------YLGFS---------GNSPL 428
Query: 417 SAWPAHSGHSTPHPSKPNNDTLLEQV--ETGRKTE-TGTSCRLFGIELINHATSSAPSEK 473
S +S + P+ + D+ + + ++G + + +G RLFGI+L+ ++ + S
Sbjct: 429 SGVSPNSLYR-PNRVESVTDSFVPVIDKDSGERRQGSGNGYRLFGIQLVGNSNAEETSPL 487
Query: 474 VPVSSLTTEGHIISTISAAADSD------GKSDIAKEFKEKKQEQVQVSPKESQSKQSCL 527
+ S + + + + A +D +S+I E ++ ++ SP+E QS+Q
Sbjct: 488 ITTSGMVGDDRPVVSFDAESDQHSEPSNINRSEIPSISCEPEKSCLR-SPQELQSRQI-- 544
Query: 528 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRT-KWEIVYTDDE 586
RS TKV MQG+AVGRA+DLT Y+ L+ +LEEMFDI+G+L + KW++VYTDDE
Sbjct: 545 ---RSCTKVHMQGIAVGRAVDLTRFECYEDLLRKLEEMFDIEGELSGFSKKWQVVYTDDE 601
Query: 587 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPM 626
DMM+VGDDPWHEFC+MV++IFI +S++VK++SP SKLP+
Sbjct: 602 DDMMMVGDDPWHEFCSMVRKIFIYTSEEVKRLSPKSKLPV 641
>gi|115458558|ref|NP_001052879.1| Os04g0442000 [Oryza sativa Japonica Group]
gi|122240925|sp|Q0JCZ4.1|ARFI_ORYSJ RecName: Full=Auxin response factor 9
gi|113564450|dbj|BAF14793.1| Os04g0442000 [Oryza sativa Japonica Group]
Length = 673
Score = 596 bits (1536), Expect = e-167, Method: Compositional matrix adjust.
Identities = 343/648 (52%), Positives = 432/648 (66%), Gaps = 56/648 (8%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
MEQLEASTNQ+L+Q +P+F LPSKILC VVN+ L AE ++DEVYAQI L PE Q+E T+
Sbjct: 51 MEQLEASTNQQLDQYLPMFNLPSKILCSVVNVELRAEADSDEVYAQIMLQPEADQSELTS 110
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
DP D + HSF K LTASDTSTHGGFSVLR+HA ECLP LDM+Q+ P QELVAKD
Sbjct: 111 LDPELQDLEKCTAHSFCKTLTASDTSTHGGFSVLRRHAEECLPQLDMSQNPPCQELVAKD 170
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
LHG EW F+HIFRGQPRRHLLTTGWS FV+SKRLVAGD F+FLRGE+GEL VGVR L RQ
Sbjct: 171 LHGTEWHFRHIFRGQPRRHLLTTGWSVFVSSKRLVAGDAFIFLRGESGELRVGVRRLMRQ 230
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKF 238
++MPSSVISS SMHLGVLATASHA++T T+F V+YKPRTS +F++S+NKYLEA
Sbjct: 231 VNNMPSSVISSHSMHLGVLATASHAISTGTLFSVFYKPRTSRSEFVVSVNKYLEAKKQNL 290
Query: 239 AVGMRYKMRFEGEDSPERRFSGTVVGVEDF-----SPHWKDSKWRSLKVQWDEPASITRP 293
+VGMR+KMRFEG+++PERRFSGT++G+ SP W DS W+SLKVQWDEP++I RP
Sbjct: 291 SVGMRFKMRFEGDEAPERRFSGTIIGIGSVPAMSKSP-WADSDWKSLKVQWDEPSAIVRP 349
Query: 294 DRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLT 353
DRVSPWE+EP AS P QP L +NKR R PP A P S L + +
Sbjct: 350 DRVSPWELEPLDAS-NPQPPQPPL-RNKRAR-----PPASPSVVAELPPSFGLWKPPSEA 402
Query: 354 QLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDN 413
+++ + + + S FS++S+ ++++ P + +Q F ++ D+
Sbjct: 403 AQTLSFSEPQRAREIFPSIPASIFSASSHVEFNSKNE------PSILSNQ--FYWSMRDS 454
Query: 414 KNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTE-TGTSCRLFGIELINHATSSAPSE 472
K S S N T +E RK E T CRLFGIE+ SSA E
Sbjct: 455 KTDSF------------SASTNKTRVE-----RKQEPTTMGCRLFGIEI-----SSAVEE 492
Query: 473 KVPVSSLTTEGHIISTISAAADSDGKSDIAKEFK-EKKQEQVQVSPKESQSKQSCLTSNR 531
+P ++++ G+ + +S DSD S + K + + SP ESQS+Q R
Sbjct: 493 ALPAATVSGVGYDQTVLSVDVDSDQISQPSNGNKSDAPGTSSERSPLESQSRQV-----R 547
Query: 532 SRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH-TRTKWEIVYTDDEGDMM 590
S TKV MQG+AVGRA+DLT L GY L +LEEMFDI+G L T +W++VYTDDE DMM
Sbjct: 548 SCTKVIMQGMAVGRAVDLTKLNGYGDLRSKLEEMFDIQGDLCPTLKRWQVVYTDDEDDMM 607
Query: 591 LVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGEDILLSS 638
LVGDDPW EFC+MVKRI+I S ++ K ++P SKLP+ G+ I LSS
Sbjct: 608 LVGDDPWDEFCSMVKRIYIYSYEEAKLLAPKSKLPVI---GDTIKLSS 652
>gi|38346580|emb|CAE04227.2| OSJNBa0064D20.11 [Oryza sativa Japonica Group]
gi|222628930|gb|EEE61062.1| hypothetical protein OsJ_14920 [Oryza sativa Japonica Group]
Length = 669
Score = 595 bits (1535), Expect = e-167, Method: Compositional matrix adjust.
Identities = 343/648 (52%), Positives = 432/648 (66%), Gaps = 56/648 (8%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
MEQLEASTNQ+L+Q +P+F LPSKILC VVN+ L AE ++DEVYAQI L PE Q+E T+
Sbjct: 47 MEQLEASTNQQLDQYLPMFNLPSKILCSVVNVELRAEADSDEVYAQIMLQPEADQSELTS 106
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
DP D + HSF K LTASDTSTHGGFSVLR+HA ECLP LDM+Q+ P QELVAKD
Sbjct: 107 LDPELQDLEKCTAHSFCKTLTASDTSTHGGFSVLRRHAEECLPQLDMSQNPPCQELVAKD 166
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
LHG EW F+HIFRGQPRRHLLTTGWS FV+SKRLVAGD F+FLRGE+GEL VGVR L RQ
Sbjct: 167 LHGTEWHFRHIFRGQPRRHLLTTGWSVFVSSKRLVAGDAFIFLRGESGELRVGVRRLMRQ 226
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKF 238
++MPSSVISS SMHLGVLATASHA++T T+F V+YKPRTS +F++S+NKYLEA
Sbjct: 227 VNNMPSSVISSHSMHLGVLATASHAISTGTLFSVFYKPRTSRSEFVVSVNKYLEAKKQNL 286
Query: 239 AVGMRYKMRFEGEDSPERRFSGTVVGVEDF-----SPHWKDSKWRSLKVQWDEPASITRP 293
+VGMR+KMRFEG+++PERRFSGT++G+ SP W DS W+SLKVQWDEP++I RP
Sbjct: 287 SVGMRFKMRFEGDEAPERRFSGTIIGIGSVPAMSKSP-WADSDWKSLKVQWDEPSAIVRP 345
Query: 294 DRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLT 353
DRVSPWE+EP AS P QP L +NKR R PP A P S L + +
Sbjct: 346 DRVSPWELEPLDAS-NPQPPQPPL-RNKRAR-----PPASPSVVAELPPSFGLWKPPSEA 398
Query: 354 QLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDN 413
+++ + + + S FS++S+ ++++ P + +Q F ++ D+
Sbjct: 399 AQTLSFSEPQRAREIFPSIPASIFSASSHVEFNSKNE------PSILSNQ--FYWSMRDS 450
Query: 414 KNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTE-TGTSCRLFGIELINHATSSAPSE 472
K S S N T +E RK E T CRLFGIE+ SSA E
Sbjct: 451 KTDSF------------SASTNKTRVE-----RKQEPTTMGCRLFGIEI-----SSAVEE 488
Query: 473 KVPVSSLTTEGHIISTISAAADSDGKSDIAKEFK-EKKQEQVQVSPKESQSKQSCLTSNR 531
+P ++++ G+ + +S DSD S + K + + SP ESQS+Q R
Sbjct: 489 ALPAATVSGVGYDQTVLSVDVDSDQISQPSNGNKSDAPGTSSERSPLESQSRQV-----R 543
Query: 532 SRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH-TRTKWEIVYTDDEGDMM 590
S TKV MQG+AVGRA+DLT L GY L +LEEMFDI+G L T +W++VYTDDE DMM
Sbjct: 544 SCTKVIMQGMAVGRAVDLTKLNGYGDLRSKLEEMFDIQGDLCPTLKRWQVVYTDDEDDMM 603
Query: 591 LVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGEDILLSS 638
LVGDDPW EFC+MVKRI+I S ++ K ++P SKLP+ G+ I LSS
Sbjct: 604 LVGDDPWDEFCSMVKRIYIYSYEEAKLLAPKSKLPVI---GDTIKLSS 648
>gi|357149540|ref|XP_003575147.1| PREDICTED: auxin response factor 7-like [Brachypodium distachyon]
Length = 672
Score = 593 bits (1529), Expect = e-166, Method: Compositional matrix adjust.
Identities = 326/639 (51%), Positives = 418/639 (65%), Gaps = 61/639 (9%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
MEQLEAST+Q+L+Q +PLF LPSKILC+VVN+ L AE ++DEVYAQI L PE Q+EP++
Sbjct: 47 MEQLEASTDQQLDQHLPLFNLPSKILCKVVNVELRAETDSDEVYAQIMLQPETDQSEPSS 106
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
DP P + + HSF K LTASDTSTHGGFSVLR+HA ECLPPLDM Q+ P QELVAKD
Sbjct: 107 ADPEPHEPEKCNAHSFCKTLTASDTSTHGGFSVLRRHAEECLPPLDMTQNPPWQELVAKD 166
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
LH EW F+HIFRGQPRRHLLTTGWS FV+SKRLVAGD F+FLRG+NG+L VGVR L RQ
Sbjct: 167 LHANEWHFRHIFRGQPRRHLLTTGWSVFVSSKRLVAGDAFIFLRGDNGDLRVGVRRLMRQ 226
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKF 238
++MPSSVISS SMHLGVLATASHA++T T+F V+YKPRT S+F++S+NKYLEA NNK
Sbjct: 227 LNNMPSSVISSHSMHLGVLATASHAISTGTLFSVFYKPRTSRSEFVVSVNKYLEAKNNKM 286
Query: 239 AVGMRYKMRFEGEDSPERRFSGTVVGVEDF--SPHWKDSKWRSLKVQWDEPASITRPDRV 296
+VGMR+KMRFEG+++PERRFSGT++GV SP W DS WRSLKVQWDEP++I RPDRV
Sbjct: 287 SVGMRFKMRFEGDEAPERRFSGTIIGVGSMTTSP-WADSDWRSLKVQWDEPSAIPRPDRV 345
Query: 297 SPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLS 356
SPWE+EP VA++ P K RP S + P P AQ+ + + L
Sbjct: 346 SPWELEPLVATSIQPPQPPARNKRARPPASPSIAPEHPPVFGLWKSPGESAQTFSFSGLQ 405
Query: 357 VTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNI 416
T E + + + S N F ++ + P + Q +
Sbjct: 406 RTQE-----LYPSSPNSIFSSSLNIGFKTKNE--------PSTLPNNQFY---------- 442
Query: 417 SAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTE-TGTSCRLFGIELINHATSSAPSEKV- 474
WP + + + +++V RK E T CRLFGIE+ + +++P V
Sbjct: 443 --WPIRDTRADSYSAS------IDKVPASRKQEPTTAGCRLFGIEIGSAVEATSPVVDVS 494
Query: 475 ------PVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLT 528
P +S+ E +S S SD + + SP E+QS+Q
Sbjct: 495 GACHEQPAASVDIESDQLSQPSHVNKSDAPAASSDR-----------SPYETQSRQV--- 540
Query: 529 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH-TRTKWEIVYTDDEG 587
RS TKV M+G+AVGRA+DLT L GY+ L +LEEMFDI+G+L + KW++VYTDDE
Sbjct: 541 --RSCTKVIMEGMAVGRAVDLTRLHGYEDLHQKLEEMFDIQGELSASLKKWKLVYTDDED 598
Query: 588 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPM 626
DMMLVGDDPW EFC+MVK+++I S ++ K ++P +KLP+
Sbjct: 599 DMMLVGDDPWSEFCSMVKKVYIYSYEEAKHLTPKAKLPV 637
>gi|224072228|ref|XP_002303662.1| predicted protein [Populus trichocarpa]
gi|222841094|gb|EEE78641.1| predicted protein [Populus trichocarpa]
Length = 575
Score = 588 bits (1515), Expect = e-165, Method: Compositional matrix adjust.
Identities = 293/357 (82%), Positives = 315/357 (88%), Gaps = 1/357 (0%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
MEQLEASTNQELNQR+PLF LPSKILCRV+N L+AEQETDEVYAQITLLPE Q E T+
Sbjct: 47 MEQLEASTNQELNQRVPLFNLPSKILCRVINTQLLAEQETDEVYAQITLLPESDQIETTS 106
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
PDPCP++ PRP VHSF KVLTASDTSTHGGFSVLRKHA+ECLPPLDM Q PTQELVAKD
Sbjct: 107 PDPCPSEPPRPTVHSFCKVLTASDTSTHGGFSVLRKHASECLPPLDMIQPIPTQELVAKD 166
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGD+FVFLRGENGEL VGVR +ARQ
Sbjct: 167 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVRRVARQ 226
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAV 240
QSSMPSSVISSQSMHLGVLATASHA++T T+FVVYYKPRTSQFIISLNKYLEAVNNKFAV
Sbjct: 227 QSSMPSSVISSQSMHLGVLATASHAISTLTLFVVYYKPRTSQFIISLNKYLEAVNNKFAV 286
Query: 241 GMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWE 300
GMR+KMRFEGEDSPERRFSGT+VGVEDFSPHW DSKWRSLKVQWDEPASI+RPDRVSPWE
Sbjct: 287 GMRFKMRFEGEDSPERRFSGTIVGVEDFSPHWNDSKWRSLKVQWDEPASISRPDRVSPWE 346
Query: 301 IEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAAS-APWSARLAQSHNLTQLS 356
IEP VAS NL QPV KNKRPR +E+P + + S +PW + S L+ S
Sbjct: 347 IEPCVASVPANLSQPVQPKNKRPRPPIEIPAFAMEDSKSVSPWPVFVGYSTPLSSKS 403
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 126/222 (56%), Positives = 151/222 (68%), Gaps = 31/222 (13%)
Query: 409 AIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSS 468
A++D+K++S WP G+STP SK ND + + GRK E TS RLFG +L+N +TSS
Sbjct: 379 AMEDSKSVSPWPVFVGYSTPLSSKSKNDPIPDPSNKGRKYEVPTSYRLFGFDLVNQSTSS 438
Query: 469 A-PSEKVP-----VSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQS 522
+ P EKV VS T+G +++ + A DSD +K EQ
Sbjct: 439 SSPIEKVSAQPISVSRGATDGRVLAAL-PAVDSD-----------QKHEQSS-------- 478
Query: 523 KQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVY 582
TS RSRTKVQ+QG+AVGRA+DLT + GY LIDELE++FDIKGQLH R KWEIVY
Sbjct: 479 -----TSTRSRTKVQLQGIAVGRAVDLTLIKGYGQLIDELEQLFDIKGQLHPRDKWEIVY 533
Query: 583 TDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 624
TDDEGDMMLVGDDPW EFCNMV+RIFICSSQDVKKMSPGSKL
Sbjct: 534 TDDEGDMMLVGDDPWPEFCNMVRRIFICSSQDVKKMSPGSKL 575
>gi|297840605|ref|XP_002888184.1| hypothetical protein ARALYDRAFT_475338 [Arabidopsis lyrata subsp.
lyrata]
gi|297334025|gb|EFH64443.1| hypothetical protein ARALYDRAFT_475338 [Arabidopsis lyrata subsp.
lyrata]
Length = 665
Score = 585 bits (1509), Expect = e-164, Method: Compositional matrix adjust.
Identities = 328/638 (51%), Positives = 415/638 (65%), Gaps = 64/638 (10%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
MEQLEAS +Q L Q++P F LPSKILC+V+NI AE ETDEVYAQITLLPE QNEPT+
Sbjct: 49 MEQLEASMHQGLEQQMPSFNLPSKILCKVINIQRRAEPETDEVYAQITLLPELDQNEPTS 108
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
PD + + VHSF K LTASDTSTHGGFSVLR+HA +CLPPLDM+Q P QELVA D
Sbjct: 109 PDAPVQEPEKCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATD 168
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
LH EW F+HIFRGQPRRHLLTTGWS FV+SK+LVAGD F+FLRGEN EL VGVR RQ
Sbjct: 169 LHNNEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQ 228
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKF 238
Q+++PSSVISS SMH+GVLATA+HA+ T T+F V+YKPRT S+FI+S+N+YLEA K
Sbjct: 229 QTNIPSSVISSHSMHIGVLATAAHAITTGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQKL 288
Query: 239 AVGMRYKMRFEGEDSPERRFSGTVVGV-EDFSPHWKDSKWRSLKVQWDEPASITRPDRVS 297
+VGMR+KMRFEGE++PE+RFSGT+VGV E+ S W DS+WRSLKVQWDEP+S+ RP+RVS
Sbjct: 289 SVGMRFKMRFEGEEAPEKRFSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVS 348
Query: 298 PWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAP---WSARLAQSHNLTQ 354
PWE+EP VA++TP+ +NKRPR P PSA P W + ++
Sbjct: 349 PWELEPLVANSTPSSQPQPPQRNKRPRPPGLPSPTTGPSAPVTPDGVWKSPADTPSSVPL 408
Query: 355 LSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNK 414
S A K + F N +S G + S
Sbjct: 409 FSPPA-------------KAATFGHGGN-----KSFGVSIGS------------------ 432
Query: 415 NISAWPAHSGHST-PHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHA------TS 467
+ WP+H+ + S NN++ T +K G CRLFG EL+ + ++
Sbjct: 433 --AFWPSHADSAAESFASAFNNES------TEKKQTNGNVCRLFGFELVENVNVDECFSA 484
Query: 468 SAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCL 527
++ S V V S + + +SDI + + ++ SP+ESQS+Q
Sbjct: 485 ASVSGAVAVDQPVPSNEFDSGQQSEPLNINQSDIPSGSDDPENSSLR-SPQESQSRQI-- 541
Query: 528 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRT-KWEIVYTDDE 586
RS TKV MQG AVGRA+DLT Y+ L +LEEMF+IKG+L T KW++VYTDDE
Sbjct: 542 ---RSCTKVHMQGSAVGRAVDLTRSECYEDLFKKLEEMFEIKGELLKSTKKWQVVYTDDE 598
Query: 587 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 624
DMM+VGDDPW+EFC MV++IFI + ++VKK+SP +KL
Sbjct: 599 DDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPKNKL 636
>gi|334183431|ref|NP_001185266.1| auxin response factor 1 [Arabidopsis thaliana]
gi|332195494|gb|AEE33615.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 660
Score = 585 bits (1507), Expect = e-164, Method: Compositional matrix adjust.
Identities = 326/647 (50%), Positives = 411/647 (63%), Gaps = 87/647 (13%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
MEQLEAS +Q L Q++P F LPSKILC+V+NI AE ETDEVYAQITLLPE Q+EPT+
Sbjct: 49 MEQLEASMHQGLEQQMPSFNLPSKILCKVINIQRRAEPETDEVYAQITLLPELDQSEPTS 108
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
PD + + VHSF K LTASDTSTHGGFSVLR+HA +CLPPLDM+Q P QELVA D
Sbjct: 109 PDAPVQEPEKCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATD 168
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
LH EW F+HIFRGQPRRHLLTTGWS FV+SK+LVAGD F+FLRGEN EL VGVR RQ
Sbjct: 169 LHNSEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQ 228
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKF 238
Q+++PSSVISS SMH+GVLATA+HA+ T T+F V+YKPRT S+FI+S+N+YLEA K
Sbjct: 229 QTNIPSSVISSHSMHIGVLATAAHAITTGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQKL 288
Query: 239 AVGMRYKMRFEGEDSPERRFSGTVVGV-EDFSPHWKDSKWRSLKVQWDEPASITRPDRVS 297
+VGMR+KMRFEGE++PE+RFSGT+VGV E+ S W DS+WRSLKVQWDEP+S+ RP+RVS
Sbjct: 289 SVGMRFKMRFEGEEAPEKRFSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVS 348
Query: 298 PWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSV 357
PWE+EP VA++TP+ +NKRPR P LPS A+ P
Sbjct: 349 PWELEPLVANSTPSSQPQPPQRNKRPR------PPGLPSPATGP---------------- 386
Query: 358 TAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAI------- 410
SDG W + S LF
Sbjct: 387 -------------------------------SDGVWKSPADTPSSVPLFSPPAKAATFGH 415
Query: 411 DDNKNISA------WPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINH 464
NK+ WP ++ + + N+ E+ +T G CRLFG EL+ +
Sbjct: 416 GGNKSFGVSIGSAFWPTNADSAAESFASAFNNESTEKKQT-----NGNVCRLFGFELVEN 470
Query: 465 A------TSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPK 518
++++ S V V S + + +SDI + ++ ++ SP+
Sbjct: 471 VNVDECFSAASVSGAVAVDQPVPSNEFDSGQQSEPLNINQSDIPSGSGDPEKSSLR-SPQ 529
Query: 519 ESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRT-K 577
ESQS+Q RS TKV MQG AVGRA+DLT Y+ L +LEEMFDIKG+L T K
Sbjct: 530 ESQSRQI-----RSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLESTKK 584
Query: 578 WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 624
W++VYTDDE DMM+VGDDPW+EFC MV++IFI + ++VKK+SP +KL
Sbjct: 585 WQVVYTDDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPKNKL 631
>gi|379323186|gb|AFD01292.1| auxin response factor 1 [Brassica rapa subsp. pekinensis]
Length = 665
Score = 584 bits (1506), Expect = e-164, Method: Compositional matrix adjust.
Identities = 328/635 (51%), Positives = 420/635 (66%), Gaps = 58/635 (9%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
MEQLEAS +Q L Q++P F LPSKILC+V+NI AE ETDEVYAQITLLPE Q+EP +
Sbjct: 49 MEQLEASMHQGLEQQMPSFNLPSKILCKVINIQRRAEPETDEVYAQITLLPEADQSEPMS 108
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
PD + + VHSF K LTASDTSTHGGFSVLR+HA +CLPPLDM+Q P QELVA D
Sbjct: 109 PDAPVQEPEKCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATD 168
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
LH EW F+HIFRGQPRRHLLTTGWS FV+SK+LVAGD F+FLRGEN EL VGVR RQ
Sbjct: 169 LHNNEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQ 228
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKF 238
Q+++PSSVISS SMH+GVLATA+HA+ T T+F V+YKPRT S+FI+S+N+YLEA N K
Sbjct: 229 QTNIPSSVISSHSMHIGVLATAAHAITTGTIFSVFYKPRTSRSEFIVSVNRYLEAKNQKL 288
Query: 239 AVGMRYKMRFEGEDSPERRFSGTVVGV-EDFSPHWKDSKWRSLKVQWDEPASITRPDRVS 297
AVGMR+KMRFEGE++PE+RFSGT+VGV E+ S W DS+WRSLKVQWDEP+S+ RP+RVS
Sbjct: 289 AVGMRFKMRFEGEEAPEKRFSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVS 348
Query: 298 PWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSV 357
PWE+EP VA+ TP+ P +NKRPR P L S +AP V
Sbjct: 349 PWELEPLVANNTPSAHLPP-QRNKRPR------PPGLLSPTTAP------------STPV 389
Query: 358 TAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNIS 417
TA+ W + SS F ++ L + F +I +
Sbjct: 390 TADG-------VWKSPADNPSSVPLFSPPAKTAAFGLG------GNKSFGVSIGS----A 432
Query: 418 AWPAHS-GHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHA------TSSAP 470
WP H+ G + S NN++ E+ +T G CRLFG EL+ + ++++
Sbjct: 433 FWPTHADGAAESFASALNNESPTEKKQT-----NGNVCRLFGFELVENMNVDECFSAASV 487
Query: 471 SEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSN 530
S V V S + + + ++++ + ++ ++ SP++SQS+Q
Sbjct: 488 SGAVAVDQPVPSNEFDSGQQSESLNINQANLPSGSGDHEKSSLR-SPQKSQSRQI----- 541
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRT-KWEIVYTDDEGDM 589
RS TKV MQG AVGRA+DLT Y+ L +LEEMFDIKG+L T KW++VYTDDE DM
Sbjct: 542 RSCTKVHMQGSAVGRAVDLTRSECYEDLFKKLEEMFDIKGELLESTKKWQVVYTDDEDDM 601
Query: 590 MLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 624
M+VGDDPW+EFC MV++IFI + ++VKK+SP +KL
Sbjct: 602 MMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPKNKL 636
>gi|30696352|ref|NP_849830.1| auxin response factor 1 [Arabidopsis thaliana]
gi|332195492|gb|AEE33613.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 662
Score = 583 bits (1504), Expect = e-164, Method: Compositional matrix adjust.
Identities = 326/640 (50%), Positives = 416/640 (65%), Gaps = 71/640 (11%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
MEQLEAS +Q L Q++P F LPSKILC+V+NI AE ETDEVYAQITLLPE Q+EPT+
Sbjct: 49 MEQLEASMHQGLEQQMPSFNLPSKILCKVINIQRRAEPETDEVYAQITLLPELDQSEPTS 108
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
PD + + VHSF K LTASDTSTHGGFSVLR+HA +CLPPLDM+Q P QELVA D
Sbjct: 109 PDAPVQEPEKCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATD 168
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
LH EW F+HIFRGQPRRHLLTTGWS FV+SK+LVAGD F+FLRGEN EL VGVR RQ
Sbjct: 169 LHNSEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQ 228
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKF 238
Q+++PSSVISS SMH+GVLATA+HA+ T T+F V+YKPRT S+FI+S+N+YLEA K
Sbjct: 229 QTNIPSSVISSHSMHIGVLATAAHAITTGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQKL 288
Query: 239 AVGMRYKMRFEGEDSPERRFSGTVVGV-EDFSPHWKDSKWRSLKVQWDEPASITRPDRVS 297
+VGMR+KMRFEGE++PE+RFSGT+VGV E+ S W DS+WRSLKVQWDEP+S+ RP+RVS
Sbjct: 289 SVGMRFKMRFEGEEAPEKRFSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVS 348
Query: 298 PWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAP------WSARLAQSHN 351
PWE+EP VA++TP+ +NKRPR P LPS A+ P W + +
Sbjct: 349 PWELEPLVANSTPSSQPQPPQRNKRPR------PPGLPSPATGPSGPDGVWKSPADTPSS 402
Query: 352 LTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAID 411
+ S A K + F N +S G + S
Sbjct: 403 VPLFSPPA-------------KAATFGHGGN-----KSFGVSIGS--------------- 429
Query: 412 DNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHA------ 465
+ WP ++ + + N+ E+ +T G CRLFG EL+ +
Sbjct: 430 -----AFWPTNADSAAESFASAFNNESTEKKQT-----NGNVCRLFGFELVENVNVDECF 479
Query: 466 TSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQS 525
++++ S V V S + + +SDI + ++ ++ SP+ESQS+Q
Sbjct: 480 SAASVSGAVAVDQPVPSNEFDSGQQSEPLNINQSDIPSGSGDPEKSSLR-SPQESQSRQI 538
Query: 526 CLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRT-KWEIVYTD 584
RS TKV MQG AVGRA+DLT Y+ L +LEEMFDIKG+L T KW++VYTD
Sbjct: 539 -----RSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLESTKKWQVVYTD 593
Query: 585 DEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 624
DE DMM+VGDDPW+EFC MV++IFI + ++VKK+SP +KL
Sbjct: 594 DEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPKNKL 633
>gi|15218904|ref|NP_176184.1| auxin response factor 1 [Arabidopsis thaliana]
gi|79320256|ref|NP_001031208.1| auxin response factor 1 [Arabidopsis thaliana]
gi|46395894|sp|Q8L7G0.2|ARFA_ARATH RecName: Full=Auxin response factor 1
gi|5080809|gb|AAD39318.1|AC007258_7 auxin response factor 1 [Arabidopsis thaliana]
gi|2245378|gb|AAC49751.1| auxin response factor 1 [Arabidopsis thaliana]
gi|27754247|gb|AAO22577.1| auxin response factor 1 [Arabidopsis thaliana]
gi|222423864|dbj|BAH19896.1| AT1G59750 [Arabidopsis thaliana]
gi|332195491|gb|AEE33612.1| auxin response factor 1 [Arabidopsis thaliana]
gi|332195493|gb|AEE33614.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 665
Score = 583 bits (1503), Expect = e-164, Method: Compositional matrix adjust.
Identities = 329/638 (51%), Positives = 417/638 (65%), Gaps = 64/638 (10%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
MEQLEAS +Q L Q++P F LPSKILC+V+NI AE ETDEVYAQITLLPE Q+EPT+
Sbjct: 49 MEQLEASMHQGLEQQMPSFNLPSKILCKVINIQRRAEPETDEVYAQITLLPELDQSEPTS 108
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
PD + + VHSF K LTASDTSTHGGFSVLR+HA +CLPPLDM+Q P QELVA D
Sbjct: 109 PDAPVQEPEKCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATD 168
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
LH EW F+HIFRGQPRRHLLTTGWS FV+SK+LVAGD F+FLRGEN EL VGVR RQ
Sbjct: 169 LHNSEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQ 228
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKF 238
Q+++PSSVISS SMH+GVLATA+HA+ T T+F V+YKPRT S+FI+S+N+YLEA K
Sbjct: 229 QTNIPSSVISSHSMHIGVLATAAHAITTGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQKL 288
Query: 239 AVGMRYKMRFEGEDSPERRFSGTVVGV-EDFSPHWKDSKWRSLKVQWDEPASITRPDRVS 297
+VGMR+KMRFEGE++PE+RFSGT+VGV E+ S W DS+WRSLKVQWDEP+S+ RP+RVS
Sbjct: 289 SVGMRFKMRFEGEEAPEKRFSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVS 348
Query: 298 PWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSV 357
PWE+EP VA++TP+ +NKRPR P LPS A+ P S +T V
Sbjct: 349 PWELEPLVANSTPSSQPQPPQRNKRPR------PPGLPSPATGP-------SGPVTPDGV 395
Query: 358 TAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNIS 417
W SS F SP K + F + + +S
Sbjct: 396 ------------WKSPADTPSSVPLF------------SPPAKAA--TFGHGGNKSFGVS 429
Query: 418 A----WPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHA------TS 467
WP ++ + + N+ E+ +T G CRLFG EL+ + ++
Sbjct: 430 IGSAFWPTNADSAAESFASAFNNESTEKKQT-----NGNVCRLFGFELVENVNVDECFSA 484
Query: 468 SAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCL 527
++ S V V S + + +SDI + ++ ++ SP+ESQS+Q
Sbjct: 485 ASVSGAVAVDQPVPSNEFDSGQQSEPLNINQSDIPSGSGDPEKSSLR-SPQESQSRQI-- 541
Query: 528 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRT-KWEIVYTDDE 586
RS TKV MQG AVGRA+DLT Y+ L +LEEMFDIKG+L T KW++VYTDDE
Sbjct: 542 ---RSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLESTKKWQVVYTDDE 598
Query: 587 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 624
DMM+VGDDPW+EFC MV++IFI + ++VKK+SP +KL
Sbjct: 599 DDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPKNKL 636
>gi|269986107|gb|ACX68650.3| auxin response factor [Dimocarpus longan]
Length = 681
Score = 582 bits (1501), Expect = e-163, Method: Compositional matrix adjust.
Identities = 332/636 (52%), Positives = 422/636 (66%), Gaps = 53/636 (8%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
MEQLEAS +Q L Q++P F LPSKILC+VVN+ AE ETDEVYAQITLLPEP NE T+
Sbjct: 57 MEQLEASMHQGLEQQMPSFNLPSKILCKVVNVQRRAEPETDEVYAQITLLPEPDPNEVTS 116
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
PDP P + + VHSF K LTASDTSTHGGFSVLR+HA +CLPPLDM+Q P QELVA D
Sbjct: 117 PDPPPPEPEKCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATD 176
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
LHG EW F+HIFRGQPRRHLLTTGWS FV+SK+LVAGD F+FLRGE GEL VGVR RQ
Sbjct: 177 LHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGETGELRVGVRRHMRQ 236
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKF 238
Q++MPSSVISS SMHLGVLATASHA+AT T+F ++YKPRT S+FI+S+NKYLEA +K
Sbjct: 237 QTNMPSSVISSHSMHLGVLATASHAIATGTLFSIFYKPRTSRSEFIVSVNKYLEARKHKL 296
Query: 239 AVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVS 297
+VGMR+KMRFEGE+ P+ FSG +VGVED + W +S+WRSLKVQWDEP+SI RPDRVS
Sbjct: 297 SVGMRFKMRFEGEEVPDEGFSGIIVGVEDNKTSAWPNSEWRSLKVQWDEPSSILRPDRVS 356
Query: 298 PWEIEPFVASAT---PNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQ 354
WE+EP VA+ T P QP +NKR R PP+ LP+ A
Sbjct: 357 SWELEPLVANTTTPPPPNSQPA-QRNKRAR-----PPV-LPTPAP--------------D 395
Query: 355 LSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNK 414
LSV W S S + S +Q + SP KFS +
Sbjct: 396 LSVLG---------MW---KSPVESQAFSYSDSQHGRDLYLSP--KFSPATKANPLGFGG 441
Query: 415 NISAWPAHSGHSTPHPSKPNN-----DTLLEQVETGRKTETGTSCRLFGIELINHATSSA 469
N S+ A +G+S P++ N ++ + + ++ TG + +LFGI+L++++
Sbjct: 442 N-SSLAAVTGNSMYWPNRGENVMESFAPVVSKESSEKRQGTGNTYKLFGIQLVDNSNIEE 500
Query: 470 PSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTS 529
S V +S+ + + ++ A ++ + ++ SP+ESQS+Q
Sbjct: 501 SSAAVTMSATVGDDRPVPSLDADSEQHSEPSNIPSVSCDAEKSCLRSPQESQSRQI---- 556
Query: 530 NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRT-KWEIVYTDDEGD 588
RS TKV MQG+AVGRA+DLT YD L+ LEEMFDI G+L T KW++VYTDDE D
Sbjct: 557 -RSCTKVHMQGIAVGRAVDLTRFDRYDDLLKRLEEMFDIGGELSGATKKWQVVYTDDEDD 615
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 624
MM+VGDDPWHEFC+MV++IFI ++++VK++SP KL
Sbjct: 616 MMMVGDDPWHEFCSMVRKIFIYTAEEVKRLSPKIKL 651
>gi|22136676|gb|AAM91657.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 662
Score = 580 bits (1496), Expect = e-163, Method: Compositional matrix adjust.
Identities = 325/640 (50%), Positives = 415/640 (64%), Gaps = 71/640 (11%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
MEQLEAS +Q L Q++P F LPSKILC+V+NI AE ETDEVYAQITLLPE Q+EPT+
Sbjct: 49 MEQLEASMHQGLEQQMPSFNLPSKILCKVINIQRRAEPETDEVYAQITLLPELDQSEPTS 108
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
PD + + VHSF K LTASDTST GGFSVLR+HA +CLPPLDM+Q P QELVA D
Sbjct: 109 PDAPVQEPEKCTVHSFCKTLTASDTSTQGGFSVLRRHADDCLPPLDMSQQPPWQELVATD 168
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
LH EW F+HIFRGQPRRHLLTTGWS FV+SK+LVAGD F+FLRGEN EL VGVR RQ
Sbjct: 169 LHNSEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQ 228
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKF 238
Q+++PSSVISS SMH+GVLATA+HA+ T T+F V+YKPRT S+FI+S+N+YLEA K
Sbjct: 229 QTNIPSSVISSHSMHIGVLATAAHAITTGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQKL 288
Query: 239 AVGMRYKMRFEGEDSPERRFSGTVVGV-EDFSPHWKDSKWRSLKVQWDEPASITRPDRVS 297
+VGMR+KMRFEGE++PE+RFSGT+VGV E+ S W DS+WRSLKVQWDEP+S+ RP+RVS
Sbjct: 289 SVGMRFKMRFEGEEAPEKRFSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVS 348
Query: 298 PWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAP------WSARLAQSHN 351
PWE+EP VA++TP+ +NKRPR P LPS A+ P W + +
Sbjct: 349 PWELEPLVANSTPSSQPQPPQRNKRPR------PPGLPSPATGPSGPDGVWKSPADTPSS 402
Query: 352 LTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAID 411
+ S A K + F N +S G + S
Sbjct: 403 VPLFSPPA-------------KAATFGHGGN-----KSFGVSIGS--------------- 429
Query: 412 DNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHA------ 465
+ WP ++ + + N+ E+ +T G CRLFG EL+ +
Sbjct: 430 -----AFWPTNADSAAESFASAFNNESTEKKQT-----NGNVCRLFGFELVENVNVDECF 479
Query: 466 TSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQS 525
++++ S V V S + + +SDI + ++ ++ SP+ESQS+Q
Sbjct: 480 SAASVSGAVAVDQPVPSNEFDSGQQSEPLNINQSDIPSGSGDPEKSSLR-SPQESQSRQI 538
Query: 526 CLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRT-KWEIVYTD 584
RS TKV MQG AVGRA+DLT Y+ L +LEEMFDIKG+L T KW++VYTD
Sbjct: 539 -----RSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLESTKKWQVVYTD 593
Query: 585 DEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 624
DE DMM+VGDDPW+EFC MV++IFI + ++VKK+SP +KL
Sbjct: 594 DEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPKNKL 633
>gi|218194918|gb|EEC77345.1| hypothetical protein OsI_16025 [Oryza sativa Indica Group]
Length = 660
Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust.
Identities = 334/649 (51%), Positives = 423/649 (65%), Gaps = 67/649 (10%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
MEQLEASTNQ+L+Q +P+F LPSKILC VVN+ L AE ++DEVYAQI L PE Q+E T+
Sbjct: 47 MEQLEASTNQQLDQYLPMFNLPSKILCSVVNVELRAEADSDEVYAQIMLQPEADQSELTS 106
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
DP D + HSF K LTASDTSTHGGFSVLR+HA ECLP LDM+Q+ P QELVAKD
Sbjct: 107 LDPELQDLEKCTAHSFCKTLTASDTSTHGGFSVLRRHAEECLPQLDMSQNPPCQELVAKD 166
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
LHG EW F+HIFRGQPRRHLLTTGWS FV+SKRLVAGD F+FLRGE+GEL VGVR L RQ
Sbjct: 167 LHGTEWHFRHIFRGQPRRHLLTTGWSVFVSSKRLVAGDAFIFLRGESGELRVGVRRLMRQ 226
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKF 238
++MPSSVISS SMHLGVLATASHA++T T+F V+YKPRTS +F++S+NKYLEA
Sbjct: 227 VNNMPSSVISSHSMHLGVLATASHAISTGTLFSVFYKPRTSRSEFVVSVNKYLEAKKQNL 286
Query: 239 AVGMRYKMRFEGEDSPERRFSGTVVGVEDF-----SPHWKDSKWRSLKVQWDEPASITRP 293
+VGMR+KMRFEG+++PERRFSGT++G+ SP W DS W+SLKVQWDEP++I P
Sbjct: 287 SVGMRFKMRFEGDEAPERRFSGTIIGIGSVPAMSKSP-WADSDWKSLKVQWDEPSAIVCP 345
Query: 294 DRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLT 353
DRVSPWE+EP AS P QP L +NKR R PP A P S L + +
Sbjct: 346 DRVSPWELEPLDAS-NPQPPQPPL-RNKRAR-----PPASPSVVAELPPSFGLWKPPSEA 398
Query: 354 QLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDN 413
+++ + + + S FS++S+ ++++ P + +Q F ++ D+
Sbjct: 399 AQTLSFSEPQRAREIFPSIPASIFSASSHVEFNSKNE------PSILSNQ--FYWSMRDS 450
Query: 414 KNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTE-TGTSCRLFGIELINHATSSAPSE 472
K S S N +E RK E T CRLFGIE+ SSA E
Sbjct: 451 KTDSF------------SASTNKARVE-----RKQEPTTMGCRLFGIEI-----SSAVEE 488
Query: 473 KVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRS 532
+P ++++ G+ + +S DSD Q+ ++S +S RS
Sbjct: 489 ALPAATVSGVGYDQTVLSVDVDSD---------------QISQPSNGNKSDAPGTSSERS 533
Query: 533 --RTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH-TRTKWEIVYTDDEGDM 589
KV MQG+AVGRA+DLT L GY L +LEEMFDI+G L T +W++VYTDDE DM
Sbjct: 534 PLSPKVIMQGMAVGRAVDLTKLNGYGDLRSKLEEMFDIQGDLCPTLKRWQVVYTDDEDDM 593
Query: 590 MLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGEDILLSS 638
MLVGDDPW EFC+MVKRI+I S ++ K ++P SKLP+ G+ I LSS
Sbjct: 594 MLVGDDPWDEFCSMVKRIYIYSYEEAKLLAPKSKLPVI---GDTIKLSS 639
>gi|223973945|gb|ACN31160.1| unknown [Zea mays]
gi|408690390|gb|AFU81655.1| ARF-type transcription factor, partial [Zea mays subsp. mays]
gi|413937283|gb|AFW71834.1| auxin response factor 1 [Zea mays]
Length = 677
Score = 575 bits (1483), Expect = e-161, Method: Compositional matrix adjust.
Identities = 332/638 (52%), Positives = 419/638 (65%), Gaps = 57/638 (8%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
MEQLEAST+Q+L+Q +PLF LP KILC+VVN+ L AE ++DEVYAQI L P+ Q+EPT+
Sbjct: 47 MEQLEASTDQQLDQHLPLFNLPHKILCKVVNVELRAETDSDEVYAQIMLQPQTEQSEPTS 106
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
PDP P + R +HSF K LTASDTSTHGGFSVLR+HA ECLP LDM Q+ P QELVAKD
Sbjct: 107 PDPEPPEPERCNIHSFCKTLTASDTSTHGGFSVLRRHAEECLPQLDMTQNPPWQELVAKD 166
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
LHG EW F+HIFRGQPRRHLLTTGWS FV+SKRLVAGD F+FLRGENGEL VGVR L RQ
Sbjct: 167 LHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRLMRQ 226
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKF 238
++MPSSVISS SMHLGVLATASHA++T T+F V+YKPRT S+F++S+NKYLEA N+K
Sbjct: 227 LNNMPSSVISSHSMHLGVLATASHAISTGTLFSVFYKPRTSRSEFVVSVNKYLEAKNHKM 286
Query: 239 AVGMRYKMRFEGEDSPERRFSGTVVGV----EDFSPHWKDSKWRSLKVQWDEPASITRPD 294
+VGMR+KMRFEG++SPERRFSGT++G+ + + W +S+WRSLKVQWDEP++I RPD
Sbjct: 287 SVGMRFKMRFEGDESPERRFSGTIIGMGCMPANSTSPWANSEWRSLKVQWDEPSAILRPD 346
Query: 295 RVSPWEIEPFVASATPNLVQPVLA-KNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLT 353
RVSPWE+EP + P QP L K RP S + P P A AQ+ + +
Sbjct: 347 RVSPWEVEP-LDRTNPQPPQPPLRNKRARPPASPSIAPELAPVFGFWKSPAEPAQAFSFS 405
Query: 354 QLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDN 413
L T E +H +S+ V F+ + E N
Sbjct: 406 GLQRTQE---------LYHSSPSSMFSSSL--------------NVGFNPKY--EGPTPN 440
Query: 414 KNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTS-CRLFGIELINHATSSAPSE 472
N W + + + N + T +K E+ TS CRLFGIE+ + A S
Sbjct: 441 TNHLYWTMRETRTESYSASIN------KAPTEKKQESTTSGCRLFGIEIGSSAVS----- 489
Query: 473 KVPVSSLTTEGH----IISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLT 528
PV ++ + GH ++ A +D + A + + SP E++S+Q+
Sbjct: 490 --PVVTVASVGHDPPPPALSVDAESDQLSQPSHANKATDAPAASSDRSPNETESRQA--- 544
Query: 529 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH-TRTKWEIVYTDDEG 587
RS TKV MQGVAVGRA+DLT L GYD L +LEEMFDI G+L + KW+++YTDDE
Sbjct: 545 --RSCTKVIMQGVAVGRAVDLTRLDGYDDLRRKLEEMFDIPGELSASLKKWKVIYTDDED 602
Query: 588 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLP 625
DMMLVGDDPW EFC MVKRI+I S ++ K ++P +KLP
Sbjct: 603 DMMLVGDDPWSEFCRMVKRIYIYSYEEAKSLTPKAKLP 640
>gi|350540016|ref|NP_001234871.1| auxin response factor 1 [Solanum lycopersicum]
gi|299118178|gb|ADJ10892.1| auxin response factor 1 [Solanum lycopersicum]
Length = 654
Score = 573 bits (1477), Expect = e-161, Method: Compositional matrix adjust.
Identities = 328/651 (50%), Positives = 411/651 (63%), Gaps = 84/651 (12%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
MEQLEAST+Q ++Q +P F LP+KILC+V+N+ L AE ETDEVYAQITLLPEP Q E T+
Sbjct: 53 MEQLEASTHQGVDQHLPSFNLPAKILCKVMNVQLRAESETDEVYAQITLLPEPDQGEITS 112
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
PDP + + VHSF K LTASDTSTHGGFSVLR+HA ECLPPLDM+Q P QELVA D
Sbjct: 113 PDPPLPEPEKCTVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQQPPWQELVASD 172
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
LHG EW F+HIFRGQPRRHLLTTGWS FV++K+LVAGD F+FLRG++GEL VGVR L RQ
Sbjct: 173 LHGNEWHFRHIFRGQPRRHLLTTGWSVFVSAKKLVAGDAFIFLRGDSGELRVGVRRLMRQ 232
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKF 238
++MPSSVISS SMHLGVLATASHA+ T T+F V+YKPRTSQ FI+S+NKYLEA N+K
Sbjct: 233 LNNMPSSVISSHSMHLGVLATASHAIMTGTLFSVFYKPRTSQSEFIVSVNKYLEARNHKL 292
Query: 239 AVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVS 297
+VGMR+KMRFEGE+ PERRFSGT+VGV D S W DS+WRSLKV WDEP+SI RPDRVS
Sbjct: 293 SVGMRFKMRFEGEEVPERRFSGTIVGVGDNPSSRWPDSEWRSLKVHWDEPSSILRPDRVS 352
Query: 298 PWEIEPFVASATPNLVQPVLAKNKR-------------PRLSMEVPPLDLPSAASAPWSA 344
PW++EP VA ATP QP +NKR P L M P+D PS+ S +
Sbjct: 353 PWDMEPLVA-ATPTNTQPP-QRNKRARPSVLPSPVQELPALGMWKSPVDSPSSFSYCDPS 410
Query: 345 RLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQ 404
R + +LS A K + N + T++
Sbjct: 411 RGRDLYPSPKLSSAA-------------KGLGYGENGSMPLSTKT--------------- 442
Query: 405 LFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINH 464
++ + + S PA +P N L +E L I+
Sbjct: 443 MYWSSQSETCTESVAPASE-------KRPANGCRLFGIE------------LLDCPTIDE 483
Query: 465 ATS----SAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKES 520
++S SA E PV SL DSD S+ + E + S + +
Sbjct: 484 SSSVAMPSAVVEDQPVPSLNV------------DSDRNSEPSNPIPSVSCEPEKSSLRST 531
Query: 521 QSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRT-KWE 579
QS RS TKV MQG AVGRA+DLT L Y+ L+ +LE MF+I+G+L T KW+
Sbjct: 532 HESQS--KQIRSCTKVHMQGKAVGRAVDLTRLDSYEDLLKKLEVMFEIEGELRGSTKKWQ 589
Query: 580 IVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIE 630
+VYTDDE DMM+VGDDPWH FC+MV++I++ ++++ KK+SP KLP+ ++
Sbjct: 590 VVYTDDEDDMMMVGDDPWHGFCSMVRKIYVYTAEEAKKLSPKIKLPVVDVK 640
>gi|226501648|ref|NP_001152338.1| LOC100285977 [Zea mays]
gi|195655287|gb|ACG47111.1| auxin response factor 1 [Zea mays]
Length = 676
Score = 565 bits (1456), Expect = e-158, Method: Compositional matrix adjust.
Identities = 329/638 (51%), Positives = 416/638 (65%), Gaps = 58/638 (9%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
MEQLEAST+Q+L+Q +PLF LP KILC+VVN+ L AE ++DEVYAQI L P+ Q+EPT+
Sbjct: 47 MEQLEASTDQQLDQHLPLFNLPHKILCKVVNVELRAETDSDEVYAQIMLQPQTEQSEPTS 106
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
PDP P + R +HSF K LTASDTSTHG SVLR+HA ECLP LDM Q+ P QELVAKD
Sbjct: 107 PDPEPPEPERCNIHSFCKTLTASDTSTHG-LSVLRRHAEECLPQLDMTQNPPWQELVAKD 165
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
LHG EW F+HIFRGQPRRHLLTTGWS FV+SKRLVAGD F+FLRGENGEL VGVR L RQ
Sbjct: 166 LHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRLMRQ 225
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKF 238
++MPSSVISS SMHLGVLATASHA++T T+F V+YKPRT S+F++S+NKYLEA N+K
Sbjct: 226 LNNMPSSVISSHSMHLGVLATASHAISTGTLFSVFYKPRTSRSEFVVSVNKYLEAKNHKM 285
Query: 239 AVGMRYKMRFEGEDSPERRFSGTVVGV----EDFSPHWKDSKWRSLKVQWDEPASITRPD 294
+VGMR+KMRFEG++SPERRFSG ++G+ + + W +S+WRSLKVQWDEP++I RPD
Sbjct: 286 SVGMRFKMRFEGDESPERRFSGIIIGMGCMPANSTSPWANSEWRSLKVQWDEPSAILRPD 345
Query: 295 RVSPWEIEPFVASATPNLVQPVL-AKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLT 353
RVSPWE+EP + P QP L K RP S + P P A AQ+ + +
Sbjct: 346 RVSPWEVEP-LNRTNPQPPQPPLRNKRARPPASPSIAPELAPVFGFWKSPAEPAQAFSFS 404
Query: 354 QLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDN 413
L T E +H +S+ V F+ + E N
Sbjct: 405 GLQRTQE---------LYHSSPSSMFSSSL--------------NVGFNPKY--EGPTPN 439
Query: 414 KNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTS-CRLFGIELINHATSSAPSE 472
N W + + + N + T +K E+ TS CRLFGIE+ + A S
Sbjct: 440 TNHLYWTMRETRTESYSASIN------KAPTEKKQESTTSGCRLFGIEIGSSAVS----- 488
Query: 473 KVPVSSLTTEGH----IISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLT 528
PV ++ + GH ++ A +D + A + + SP E++S+Q+
Sbjct: 489 --PVVTVASVGHDPPPPALSVDAESDQLSQPSHANKATDAPAASSDRSPNETESRQA--- 543
Query: 529 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH-TRTKWEIVYTDDEG 587
RS TKV MQGVAVGRA+DLT L GYD L +LEEMFDI G+L + KW+++YTDDE
Sbjct: 544 --RSCTKVIMQGVAVGRAVDLTRLDGYDDLRRKLEEMFDIPGELSASLNKWKVIYTDDED 601
Query: 588 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLP 625
DMMLVGDDPW EFC MVKRI+I S ++ K ++P +KLP
Sbjct: 602 DMMLVGDDPWSEFCRMVKRIYIYSYEEAKSLTPKAKLP 639
>gi|19352053|dbj|BAB85920.1| auxin response factor 16 [Oryza sativa]
Length = 695
Score = 549 bits (1415), Expect = e-153, Method: Compositional matrix adjust.
Identities = 316/664 (47%), Positives = 420/664 (63%), Gaps = 63/664 (9%)
Query: 1 MEQLEASTNQEL-NQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQ-NEP 58
+EQL+ T+ L ++I +F++P KILC+VVN+ L AE ETDEV+AQITL P+P Q N P
Sbjct: 41 LEQLQEPTDPALLAEQIKMFQVPYKILCKVVNVELKAETETDEVFAQITLQPDPDQENLP 100
Query: 59 TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
T PDP + PRP VHSF K+LT SDTSTHGGFSVLR+HA ECLPPLDM+ +TPTQEL+
Sbjct: 101 TLPDPPLPEQPRPVVHSFCKILTPSDTSTHGGFSVLRRHANECLPPLDMSMATPTQELIT 160
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
KDLHG EWRFKHI+RGQPRRHLLTTGWSTFVTSK+L++GD FV+LR E GE VGVR L
Sbjct: 161 KDLHGSEWRFKHIYRGQPRRHLLTTGWSTFVTSKKLISGDAFVYLRSETGEQRVGVRRLV 220
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNN 236
++QS+MP+SVISSQSMHLGVLA+ASHA+ T ++F+VYY+PR SQ+I+S+NKYL A
Sbjct: 221 QKQSTMPASVISSQSMHLGVLASASHAIKTNSIFLVYYRPRLSQSQYIVSVNKYLAASKV 280
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRV 296
F VGMR+KM FEGED P ++FSGT+VG D S W S+W+SLKVQWDE ++ P+RV
Sbjct: 281 GFNVGMRFKMSFEGEDVPVKKFSGTIVGEGDLSLQWSGSEWKSLKVQWDEVTNVNGPERV 340
Query: 297 SPWEIEPFVASATPNLVQPVLA--KNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQ 354
SPWEIE +A P + P+ + KNKRPR E L A W + + Q H T
Sbjct: 341 SPWEIETCDGTA-PAINVPLQSATKNKRPREPSETIDLQSLEPAQEFWLSGMPQQHEKTG 399
Query: 355 LSVTAEDKRIDNH-VAWHHKHSDFSSNSNFMSRTQSDGE-WL---------TSPRV-KFS 402
+ ++E I H V W +H + + S+ + + E WL SP + + S
Sbjct: 400 IG-SSEPNCISGHQVVWPGEHPGYGAVSSSVCQNPLVLESWLKDFNSSNKGVSPTLSEIS 458
Query: 403 QQLFQEAIDDNKNISAWPAHSGHSTPHPSK-----------------PNNDTLLEQVETG 445
Q++FQ + I+ WPA S + P+ PN ++E G
Sbjct: 459 QKIFQ-VTSNEARIATWPARSAYQAEEPTSKLSSNTAACGYRTEEVAPNASKVVE----G 513
Query: 446 RKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKE- 504
+K RLFG++L+ + +S+ T + + A+A G + + +
Sbjct: 514 KKEP--AMFRLFGVDLMKCTS---------ISTTTDDKSSVGAGEASAKGTGSHEDSGQL 562
Query: 505 --FKEKKQEQVQV--SPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLID 560
F + +E + SP+E QS Q+ + R+R KVQM G AVGRA+DL L GY+ L++
Sbjct: 563 SAFSKVTKEHIAADESPQEIQSHQN--YTARTRIKVQMHGNAVGRAVDLANLDGYEQLMN 620
Query: 561 ELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 620
ELEEMF+IK + KW++ +TDDEGD M VGDDPW EFC MV++I + +D KK+ P
Sbjct: 621 ELEEMFNIK---DLKQKWKVAFTDDEGDTMEVGDDPWLEFCQMVRKIVLYPIEDEKKIEP 677
Query: 621 GSKL 624
KL
Sbjct: 678 HPKL 681
>gi|115435540|ref|NP_001042528.1| Os01g0236300 [Oryza sativa Japonica Group]
gi|75251164|sp|Q5NB85.1|ARFA_ORYSJ RecName: Full=Auxin response factor 1; AltName: Full=OsARF16
gi|56783859|dbj|BAD81271.1| putative auxin response factor 20 [Oryza sativa Japonica Group]
gi|113532059|dbj|BAF04442.1| Os01g0236300 [Oryza sativa Japonica Group]
gi|213959154|gb|ACJ54911.1| auxin response factor [Oryza sativa Japonica Group]
gi|215734875|dbj|BAG95597.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 699
Score = 549 bits (1415), Expect = e-153, Method: Compositional matrix adjust.
Identities = 316/664 (47%), Positives = 420/664 (63%), Gaps = 63/664 (9%)
Query: 1 MEQLEASTNQEL-NQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQ-NEP 58
+EQL+ T+ L ++I +F++P KILC+VVN+ L AE ETDEV+AQITL P+P Q N P
Sbjct: 45 LEQLQEPTDPALLAEQIKMFQVPYKILCKVVNVELKAETETDEVFAQITLQPDPDQENLP 104
Query: 59 TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
T PDP + PRP VHSF K+LT SDTSTHGGFSVLR+HA ECLPPLDM+ +TPTQEL+
Sbjct: 105 TLPDPPLPEQPRPVVHSFCKILTPSDTSTHGGFSVLRRHANECLPPLDMSMATPTQELIT 164
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
KDLHG EWRFKHI+RGQPRRHLLTTGWSTFVTSK+L++GD FV+LR E GE VGVR L
Sbjct: 165 KDLHGSEWRFKHIYRGQPRRHLLTTGWSTFVTSKKLISGDAFVYLRSETGEQRVGVRRLV 224
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNN 236
++QS+MP+SVISSQSMHLGVLA+ASHA+ T ++F+VYY+PR SQ+I+S+NKYL A
Sbjct: 225 QKQSTMPASVISSQSMHLGVLASASHAIKTNSIFLVYYRPRLSQSQYIVSVNKYLAASKV 284
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRV 296
F VGMR+KM FEGED P ++FSGT+VG D S W S+W+SLKVQWDE ++ P+RV
Sbjct: 285 GFNVGMRFKMSFEGEDVPVKKFSGTIVGEGDLSLQWSGSEWKSLKVQWDEVTNVNGPERV 344
Query: 297 SPWEIEPFVASATPNLVQPVLA--KNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQ 354
SPWEIE +A P + P+ + KNKRPR E L A W + + Q H T
Sbjct: 345 SPWEIETCDGTA-PAINVPLQSATKNKRPREPSETIDLQSLEPAQEFWLSGMPQQHEKTG 403
Query: 355 LSVTAEDKRIDNH-VAWHHKHSDFSSNSNFMSRTQSDGE-WL---------TSPRV-KFS 402
+ ++E I H V W +H + + S+ + + E WL SP + + S
Sbjct: 404 IG-SSEPNCISGHQVVWPGEHPGYGAVSSSVCQNPLVLESWLKDFNSSNKGVSPTLSEIS 462
Query: 403 QQLFQEAIDDNKNISAWPAHSGHSTPHPSK-----------------PNNDTLLEQVETG 445
Q++FQ + I+ WPA S + P+ PN ++E G
Sbjct: 463 QKIFQ-VTSNEARIATWPARSAYQAEEPTSKLSSNTAACGYRTEEVAPNASKVVE----G 517
Query: 446 RKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKE- 504
+K RLFG++L+ + +S+ T + + A+A G + + +
Sbjct: 518 KKEP--AMFRLFGVDLMKCTS---------ISTTTDDKSSVGAGEASAKGTGSHEDSGQL 566
Query: 505 --FKEKKQEQVQV--SPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLID 560
F + +E + SP+E QS Q+ + R+R KVQM G AVGRA+DL L GY+ L++
Sbjct: 567 SAFSKVTKEHIAADESPQEIQSHQN--YTARTRIKVQMHGNAVGRAVDLANLDGYEQLMN 624
Query: 561 ELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 620
ELEEMF+IK + KW++ +TDDEGD M VGDDPW EFC MV++I + +D KK+ P
Sbjct: 625 ELEEMFNIK---DLKQKWKVAFTDDEGDTMEVGDDPWLEFCQMVRKIVLYPIEDEKKIEP 681
Query: 621 GSKL 624
KL
Sbjct: 682 HPKL 685
>gi|218187833|gb|EEC70260.1| hypothetical protein OsI_01065 [Oryza sativa Indica Group]
Length = 699
Score = 549 bits (1415), Expect = e-153, Method: Compositional matrix adjust.
Identities = 316/664 (47%), Positives = 420/664 (63%), Gaps = 63/664 (9%)
Query: 1 MEQLEASTNQEL-NQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQ-NEP 58
+EQL+ T+ L ++I +F++P KILC+VVN+ L AE ETDEV+AQITL P+P Q N P
Sbjct: 45 LEQLQEPTDPALLAEQIKMFQVPYKILCKVVNVELKAETETDEVFAQITLQPDPDQENLP 104
Query: 59 TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
T PDP + PRP VHSF K+LT SDTSTHGGFSVLR+HA ECLPPLDM+ +TPTQEL+
Sbjct: 105 TLPDPPLPEQPRPVVHSFCKILTPSDTSTHGGFSVLRRHANECLPPLDMSMATPTQELIT 164
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
KDLHG EWRFKHI+RGQPRRHLLTTGWSTFVTSK+L++GD FV+LR E GE VGVR L
Sbjct: 165 KDLHGSEWRFKHIYRGQPRRHLLTTGWSTFVTSKKLISGDAFVYLRSETGEQRVGVRRLV 224
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNN 236
++QS+MP+SVISSQSMHLGVLA+ASHA+ T ++F+VYY+PR SQ+I+S+NKYL A
Sbjct: 225 QKQSTMPASVISSQSMHLGVLASASHAIKTNSIFLVYYRPRLSQSQYIVSVNKYLAASKV 284
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRV 296
F VGMR+KM FEGED P ++FSGT+VG D S W S+W+SLKVQWDE ++ P+RV
Sbjct: 285 GFNVGMRFKMSFEGEDVPVKKFSGTIVGEGDLSLQWSGSEWKSLKVQWDEVTNVNGPERV 344
Query: 297 SPWEIEPFVASATPNLVQPVLA--KNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQ 354
SPWEIE +A P + P+ + KNKRPR E L A W + + Q H T
Sbjct: 345 SPWEIETCDGTA-PAINVPLQSATKNKRPREPSETIDLQSLEPAQEFWLSGMPQQHEKTG 403
Query: 355 LSVTAEDKRIDNH-VAWHHKHSDFSSNSNFMSRTQSDGE-WL---------TSPRV-KFS 402
+ ++E I H V W +H + + S+ + + E WL SP + + S
Sbjct: 404 IG-SSEPNCISGHQVVWPGEHPGYGAVSSSVCQNPLVLESWLKDFNSSNKGVSPTLSEIS 462
Query: 403 QQLFQEAIDDNKNISAWPAHSGHSTPHPSK-----------------PNNDTLLEQVETG 445
Q++FQ + I+ WPA S + P+ PN ++E G
Sbjct: 463 QKIFQ-VTSNEARIATWPARSAYQAEEPTSKLSSNTAACGYRTEEVAPNASKVVE----G 517
Query: 446 RKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKE- 504
+K RLFG++L+ + +S+ T + + A+A G + + +
Sbjct: 518 KKEP--AMFRLFGVDLMKCTS---------ISTTTDDKSSVGAGEASAKGTGSHEDSGQL 566
Query: 505 --FKEKKQEQVQV--SPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLID 560
F + +E + SP+E QS Q+ + R+R KVQM G AVGRA+DL L GY+ L++
Sbjct: 567 SAFSKVTKEHIAADESPQEIQSHQN--YTARTRIKVQMHGNAVGRAVDLANLDGYEQLMN 624
Query: 561 ELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 620
ELEEMF+IK + KW++ +TDDEGD M VGDDPW EFC MV++I + +D KK+ P
Sbjct: 625 ELEEMFNIK---DLKQKWKVAFTDDEGDTMEVGDDPWLEFCQMVRKIVLYPIEDEKKIEP 681
Query: 621 GSKL 624
KL
Sbjct: 682 HPKL 685
>gi|357167643|ref|XP_003581263.1| PREDICTED: auxin response factor 9-like [Brachypodium distachyon]
Length = 693
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 313/639 (48%), Positives = 395/639 (61%), Gaps = 71/639 (11%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
+EQLEASTNQ+L+Q +P+F LPSKILC VVN+ L E ++DEVYAQI L P+ Q+E T+
Sbjct: 101 IEQLEASTNQQLDQYLPMFNLPSKILCSVVNVELRTEADSDEVYAQIMLQPQDEQSELTS 160
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
P P + R +HSF K LTASDTSTHGGFSVLR+HA ECLP LDM+Q+ P QELVAKD
Sbjct: 161 AGP-PQELERGTIHSFCKTLTASDTSTHGGFSVLRRHAEECLPQLDMSQNPPCQELVAKD 219
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
LHG EW F+HIFRGQPRRHLLTTGWS FV+SKRLVAGD F+FLRG NGEL VGVR RQ
Sbjct: 220 LHGAEWHFRHIFRGQPRRHLLTTGWSVFVSSKRLVAGDAFIFLRGGNGELRVGVRRHMRQ 279
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKF 238
++MPSSVISS SMHLGVLATASHA++T T+F V+YKPRT S+F++S+NKYLEA
Sbjct: 280 VNNMPSSVISSHSMHLGVLATASHAISTGTLFSVFYKPRTSRSEFVVSVNKYLEAKKQNM 339
Query: 239 AVGMRYKMRFEGEDSPERRFSGTVVGVEDF----SPHWKDSKWRSLKVQWDEPASITRPD 294
+VGMR+KM+FEG+++ ERRFSGT+VG+ S W DS W+SLKVQWDEP+SI RPD
Sbjct: 340 SVGMRFKMKFEGDEALERRFSGTIVGMGSTPTMPSSQWADSDWKSLKVQWDEPSSILRPD 399
Query: 295 RVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQ 354
RVS WE+EP + SA P +P L +NKR R L S + P
Sbjct: 400 RVSLWELEP-LDSANPQTPEPPL-RNKRARA--------LASPSVVP------------- 436
Query: 355 LSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNK 414
D N + L+ + +++LF +I +
Sbjct: 437 ---------------------DLPPNFGLWKSPSEPSQTLSFSEPQRARELFPTSIFSST 475
Query: 415 NIS----AWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAP 470
N+ WP + + N T E + T CRLFGIE+ SS
Sbjct: 476 NVMFDQFYWPGRETKDGSYAASTNKVT----AERKHEPTTTGGCRLFGIEI-----SSTV 526
Query: 471 SEKVPVSSLTTEGHIISTISAAADSDGKSDIAK-EFKEKKQEQVQVSPKESQSKQSCLTS 529
E PV + + H + S DS S + + + + E+QS+Q
Sbjct: 527 EETQPVVTASVGDHDQTAASVDMDSSVLSQPSNINNSDAPAGSSERALLETQSRQV---- 582
Query: 530 NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL-HTRTKWEIVYTDDEGD 588
RS TKV M+G+AVGRA+DL L GY L +LEEMFDI G+L T +W++VY DDE D
Sbjct: 583 -RSCTKVIMKGMAVGRAVDLARLDGYGDLHRKLEEMFDIHGELCSTLKRWQVVYADDEDD 641
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMF 627
MMLVGDDPW EFC MVKRI+I S ++ K+++P +K P+
Sbjct: 642 MMLVGDDPWDEFCGMVKRIYIYSYEEAKQLAPKAKTPVI 680
>gi|222618063|gb|EEE54195.1| hypothetical protein OsJ_01030 [Oryza sativa Japonica Group]
Length = 662
Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust.
Identities = 312/652 (47%), Positives = 413/652 (63%), Gaps = 62/652 (9%)
Query: 12 LNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQ-NEPTTPDPCPADSPR 70
L ++I +F++P KILC+VVN+ L AE ETDEV+AQITL P+P Q N PT PDP + PR
Sbjct: 20 LAEQIKMFQVPYKILCKVVNVELKAETETDEVFAQITLQPDPDQENLPTLPDPPLPEQPR 79
Query: 71 PKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKH 130
P VHSF K+LT SDTSTHGGFSVLR+HA ECLPPLDM+ +TPTQEL+ KDLHG EWRFKH
Sbjct: 80 PVVHSFCKILTPSDTSTHGGFSVLRRHANECLPPLDMSMATPTQELITKDLHGSEWRFKH 139
Query: 131 IFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVIS 190
I+RGQPRRHLLTTGWSTFVTSK+L++GD FV+LR E GE VGVR L ++QS+MP+SVIS
Sbjct: 140 IYRGQPRRHLLTTGWSTFVTSKKLISGDAFVYLRSETGEQRVGVRRLVQKQSTMPASVIS 199
Query: 191 SQSMHLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRF 248
SQSMHLGVLA+ASHA+ T ++F+VYY+PR SQ+I+S+NKYL A F VGMR+KM F
Sbjct: 200 SQSMHLGVLASASHAIKTNSIFLVYYRPRLSQSQYIVSVNKYLAASKVGFNVGMRFKMSF 259
Query: 249 EGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASA 308
EGED P ++FSGT+VG D S W S+W+SLKVQWDE ++ P+RVSPWEIE +A
Sbjct: 260 EGEDVPVKKFSGTIVGEGDLSLQWSGSEWKSLKVQWDEVTNVNGPERVSPWEIETCDGTA 319
Query: 309 TPNLVQPVLA--KNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDN 366
P + P+ + KNKRPR E L A W + + Q H T + ++E I
Sbjct: 320 -PAINVPLQSATKNKRPREPSETIDLQSLEPAQEFWLSGMPQQHEKTGIG-SSEPNCISG 377
Query: 367 H-VAWHHKHSDFSSNSNFMSRTQSDGE-WL---------TSPRV-KFSQQLFQEAIDDNK 414
H V W +H + + S+ + + E WL SP + + SQ++FQ +
Sbjct: 378 HQVVWPGEHPGYGAVSSSVCQNPLVLESWLKDFNSSNKGVSPTLSEISQKIFQ-VTSNEA 436
Query: 415 NISAWPAHSGHSTPHPSK-----------------PNNDTLLEQVETGRKTETGTSCRLF 457
I+ WPA S + P+ PN ++E G+K RLF
Sbjct: 437 RIATWPARSAYQAEEPTSKLSSNTAACGYRTEEVAPNASKVVE----GKKEP--AMFRLF 490
Query: 458 GIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKE---FKEKKQEQVQ 514
G++L+ + +S+ T + + A+A G + + + F + +E +
Sbjct: 491 GVDLMKCTS---------ISTTTDDKSSVGAGEASAKGTGSHEDSGQLSAFSKVTKEHIA 541
Query: 515 V--SPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL 572
SP+E QS Q+ + R+R KVQM G AVGRA+DL L GY+ L++ELEEMF+IK
Sbjct: 542 ADESPQEIQSHQN--YTARTRIKVQMHGNAVGRAVDLANLDGYEQLMNELEEMFNIK--- 596
Query: 573 HTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 624
+ KW++ +TDDEGD M VGDDPW EFC MV++I + +D KK+ P KL
Sbjct: 597 DLKQKWKVAFTDDEGDTMEVGDDPWLEFCQMVRKIVLYPIEDEKKIEPHPKL 648
>gi|323388733|gb|ADX60171.1| ARF transcription factor [Zea mays]
Length = 686
Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust.
Identities = 315/648 (48%), Positives = 414/648 (63%), Gaps = 47/648 (7%)
Query: 1 MEQLEASTNQEL-NQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE-P 58
+EQL+ T+ L ++I +F++P+KILC+VVN+ L AE ETDE+YAQITL PEP Q + P
Sbjct: 42 LEQLQEPTDPALLAEQIKMFQVPNKILCKVVNVELKAETETDEMYAQITLQPEPDQVDLP 101
Query: 59 TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
P+P ++ RP VHSF K+LT SDTSTHGGFSVLR+HA ECLP LDM+ TPTQEL+
Sbjct: 102 QLPEPPLQETSRPVVHSFCKILTPSDTSTHGGFSVLRRHANECLPALDMSMPTPTQELIT 161
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
KDLHG EWRFKHI+RGQPRRHLLTTGWSTFVTSK+L+AGD FV+LR E G+ VGVR L
Sbjct: 162 KDLHGSEWRFKHIYRGQPRRHLLTTGWSTFVTSKKLIAGDAFVYLRSETGQQRVGVRRLV 221
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNN 236
++QS+MP+SVISSQSMHLGVLA+ASHA+ T ++F+VYY+PR SQ+I+ LNKYLE+
Sbjct: 222 QKQSTMPASVISSQSMHLGVLASASHAIRTHSIFLVYYRPRLSQSQYIVRLNKYLESSKI 281
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRV 296
F VGMR+KM FEG+D P ++FSGTVV D SP W+ S+W++LKV+WDE ++ P+RV
Sbjct: 282 GFDVGMRFKMSFEGDDVPIKKFSGTVVDKGDLSPQWQGSEWKTLKVKWDEATNLNGPERV 341
Query: 297 SPWEIEPFVASATPNLVQPVL--AKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQ 354
S WEIEPF ASA P + PV KNKRPR + E + A W + + H T
Sbjct: 342 SSWEIEPFDASA-PAITMPVQPSMKNKRPRETAEGLDIHALEPAQEFWLSGRPEQHEKTS 400
Query: 355 LSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQS-DGEWLTS-------PRV-KFSQQL 405
+S ++E K + VAW + + +S+ S+ + + + G W P + + SQ+L
Sbjct: 401 VS-SSEPK---HQVAWTSERAGYSAMSSSICQNSAVTGSWFKGFNSSGSLPSLPEISQKL 456
Query: 406 FQEAIDDNKNISAWPAHSGHSTPHP-SKPNNDTLLEQVET------------GRKTETGT 452
FQ +D + + WP S + P SK + +T L +T K E G
Sbjct: 457 FQVTSNDAR-VPPWPGLSAYHADEPSSKLSCNTALCSYQTEEVAPRFSNAVEEEKKEPGM 515
Query: 453 SCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQ 512
RLFG+ LINHA SSA ++K V + T + DS S + K+
Sbjct: 516 -FRLFGVNLINHARSSATADKTSVGAGETSARAAGSFE---DSAQLSRVTKDHT----HM 567
Query: 513 VQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL 572
V SP+E QS QSC S RSR KVQM G V RA+DL L GY+ L+ E+ EMF+IK L
Sbjct: 568 VNGSPREIQSHQSC--SGRSRIKVQMHGNDVCRAVDLGNLDGYEQLMGEVGEMFEIK-DL 624
Query: 573 HTRTK--WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 618
++ K W++ + +DE + M VG PW EFC MV++I I S D M
Sbjct: 625 GSKEKEEWKVTFINDENETMEVGAVPWQEFCQMVRKIVIHSIGDRGHM 672
>gi|295844288|gb|ADG43141.1| auxin response factor 7 [Zea mays]
gi|414875581|tpg|DAA52712.1| TPA: hypothetical protein ZEAMMB73_730460 [Zea mays]
Length = 686
Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust.
Identities = 315/648 (48%), Positives = 415/648 (64%), Gaps = 47/648 (7%)
Query: 1 MEQLEASTNQEL-NQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE-P 58
+EQL+ T+ L ++I +F++P+KILC+VVN+ L AE ETDE+YAQITL PEP Q + P
Sbjct: 42 LEQLQEPTDPALLAEQIKMFQVPNKILCKVVNVELKAETETDEMYAQITLQPEPDQVDLP 101
Query: 59 TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
P+P ++ RP VHSF K+LT SDTSTHGGFSVLR+HA ECLP LDM+ TPTQEL+
Sbjct: 102 QLPEPPLQETSRPVVHSFCKILTPSDTSTHGGFSVLRRHANECLPALDMSMPTPTQELIT 161
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
KDLHG EWRFKHI+RGQPRRHLLTTGWSTFVTSK+L+AGD FV+LR E G+ VGVR L
Sbjct: 162 KDLHGSEWRFKHIYRGQPRRHLLTTGWSTFVTSKKLIAGDAFVYLRSETGQQRVGVRRLV 221
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNN 236
++QS+MP+SVISSQSMHLGVLA+ASHA+ T ++F+VYY+PR SQ+I+ LNKYLE+
Sbjct: 222 QKQSTMPASVISSQSMHLGVLASASHAIRTHSIFLVYYRPRLSQSQYIVRLNKYLESSKI 281
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRV 296
F VGMR+KM FEG+D P ++FSGTVV D SP W+ S+W++LKV+WDE ++ P+RV
Sbjct: 282 GFDVGMRFKMSFEGDDVPIKKFSGTVVDKGDLSPQWQGSEWKTLKVKWDEATNLNGPERV 341
Query: 297 SPWEIEPFVASATPNLVQPVL--AKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQ 354
S WEIEPF ASA P + PV KNKRPR + E + A W + + H T
Sbjct: 342 SSWEIEPFDASA-PAITMPVQPSMKNKRPRETAEGLDIHALEPAQEFWLSGRPEQHEKTS 400
Query: 355 LSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQS-DGEWL-------TSPRV-KFSQQL 405
+S ++E K + VAW + + +S+ S+ + + + G W + P + + SQ+L
Sbjct: 401 VS-SSEPK---HQVAWTSERAGYSAMSSSICQNSAVTGSWFKGFNSSGSHPSLPEISQKL 456
Query: 406 FQEAIDDNKNISAWPAHSGHSTPHP-SKPNNDTLLEQVET------------GRKTETGT 452
FQ +D + + WP S + P SK + +T L +T K E G
Sbjct: 457 FQVTSNDAR-VPPWPGLSAYHADEPSSKLSCNTALCSYQTEEVAPRFSNAVEEEKKEPGM 515
Query: 453 SCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQ 512
RLFG+ LINHA SSA ++K V + T + DS S + K+
Sbjct: 516 -FRLFGVNLINHARSSATADKTSVGAGETSARAAGSFE---DSAQLSRVTKDHT----HM 567
Query: 513 VQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL 572
V SP+E QS QSC S RSR KVQM G V RA+DL L GY+ L+ E+ EMF+IK L
Sbjct: 568 VNGSPREIQSHQSC--SGRSRIKVQMHGNDVCRAVDLGNLDGYEQLMGEVGEMFEIK-DL 624
Query: 573 HTRTK--WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 618
++ K W++ + +DE + M VG PW EFC MV++I I S D M
Sbjct: 625 GSKEKEEWKVTFINDENETMEVGAVPWQEFCQMVRKIVIHSIGDRGHM 672
>gi|224058145|ref|XP_002299455.1| predicted protein [Populus trichocarpa]
gi|222846713|gb|EEE84260.1| predicted protein [Populus trichocarpa]
Length = 537
Score = 542 bits (1397), Expect = e-151, Method: Compositional matrix adjust.
Identities = 282/340 (82%), Positives = 302/340 (88%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
MEQLEASTNQELNQR+PLF LPSKILCRV++ L+AEQ+TDEVYAQITL+PE Q EPT+
Sbjct: 33 MEQLEASTNQELNQRVPLFNLPSKILCRVIHTQLLAEQDTDEVYAQITLIPESDQIEPTS 92
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
PD ++ PRP VHSF KVLTASDTSTHGGFSVLRKHATECLPPLDM Q TPTQELVAKD
Sbjct: 93 PDSSSSEPPRPTVHSFCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQPTPTQELVAKD 152
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGD+FVFLRGENGEL VGVR +A Q
Sbjct: 153 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVRRVACQ 212
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAV 240
QSSMPSSVISSQSMHLGVLATASHAV+T T+FVVYYKPRTSQFIISLNKYLEAV+NKF V
Sbjct: 213 QSSMPSSVISSQSMHLGVLATASHAVSTLTLFVVYYKPRTSQFIISLNKYLEAVSNKFVV 272
Query: 241 GMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWE 300
GMR+KMRFEGEDSP+RRFSGT+VGVEDFSPHW DSKWRSLKVQWDEPA I RPDRVSPWE
Sbjct: 273 GMRFKMRFEGEDSPDRRFSGTIVGVEDFSPHWNDSKWRSLKVQWDEPAPIPRPDRVSPWE 332
Query: 301 IEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASA 340
IEP VAS NL QPV KNKRPR E+P L + S+
Sbjct: 333 IEPCVASVPTNLSQPVTQKNKRPRPPFEIPALGYSTPLSS 372
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 122/195 (62%), Positives = 144/195 (73%), Gaps = 22/195 (11%)
Query: 424 GHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEG 483
G+STP SK ND +L+ + GRK+E TS RLFGI+L+NH++SS P E VP ++
Sbjct: 365 GYSTPLSSKSKNDAILDPSDKGRKSEVPTSYRLFGIDLVNHSSSSTPIE-VPAQLMS--- 420
Query: 484 HIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAV 543
I ++S KE+K EQ+Q SPKE QSKQS TS RSRTKVQMQG+AV
Sbjct: 421 --ICSVS---------------KEQKPEQLQKSPKEIQSKQSS-TSTRSRTKVQMQGIAV 462
Query: 544 GRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNM 603
GRA+DLT L GY LIDELE++FDIKGQLH R KWEIVYTDDEGDMMLVGDDPW EFCNM
Sbjct: 463 GRAVDLTMLKGYSQLIDELEQLFDIKGQLHPRDKWEIVYTDDEGDMMLVGDDPWPEFCNM 522
Query: 604 VKRIFICSSQDVKKM 618
V+RI+ICSSQDVK+M
Sbjct: 523 VRRIYICSSQDVKRM 537
>gi|242055813|ref|XP_002457052.1| hypothetical protein SORBIDRAFT_03g000530 [Sorghum bicolor]
gi|241929027|gb|EES02172.1| hypothetical protein SORBIDRAFT_03g000530 [Sorghum bicolor]
Length = 688
Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust.
Identities = 315/639 (49%), Positives = 409/639 (64%), Gaps = 42/639 (6%)
Query: 1 MEQLEASTNQEL-NQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQ-NEP 58
+EQL+ T+ L +I +F++P+KILC+VVN+ L AE ETDE+YAQITL PEP Q + P
Sbjct: 39 LEQLQEPTDPALLADQIKMFQVPNKILCKVVNVELKAETETDEMYAQITLQPEPDQMDLP 98
Query: 59 TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
T PDP ++ RP VHSF K+LT SDTSTHGGFSVLR+HA ECLPPLDM+ TPTQEL+
Sbjct: 99 TLPDPPLPETSRPVVHSFCKILTPSDTSTHGGFSVLRRHANECLPPLDMSMPTPTQELIT 158
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
KDLHG EWRFKHI+RGQPRRHLLTTGWSTFVTSK+L+AGD FV+LR E GE VGVR L
Sbjct: 159 KDLHGSEWRFKHIYRGQPRRHLLTTGWSTFVTSKKLIAGDAFVYLRSETGEQRVGVRRLV 218
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNN 236
++QS+MP+SVISSQSMHLGVLA+ASHA+ T ++F+VYY+PR SQ+I+SLNKYLE+
Sbjct: 219 QKQSTMPASVISSQSMHLGVLASASHAIKTNSIFLVYYRPRLSQSQYIVSLNKYLESSKI 278
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRV 296
F VGMR+KM FEGED P ++FSGTVV D SPHW+ S W++LKV+WDE + P+RV
Sbjct: 279 GFNVGMRFKMSFEGEDVPVKKFSGTVVDKGDLSPHWQGSDWKTLKVKWDEATNFNGPERV 338
Query: 297 SPWEIEPFVASATPNL---VQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLT 353
S WEIEPF ASA P + VQP + KNKRPR + E + A W + + H T
Sbjct: 339 SSWEIEPFDASA-PAINIPVQPSM-KNKRPRETAESLDIHALEPAQEFWLSGRPEQHK-T 395
Query: 354 QLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQS-DGEWL---------TSPRV-KFS 402
+S + + VAW + +S+ S+ + + + G W SP + + S
Sbjct: 396 SISSNEPNCISVHQVAWTSERPGYSAMSSSICQNSAVIGSWFKDFNSSSKGASPSLPEIS 455
Query: 403 QQLFQEAIDDNKNISAWPAHSGHSTPH-PSKPNNDTLLEQVET-----------GRKTET 450
Q+LFQ +D + + WP S + SK + +T L +T K E
Sbjct: 456 QKLFQVTSNDAR-VPPWPGLSAYQAEELSSKLSCNTALCSYQTEEVAPKFSIAVEEKKEP 514
Query: 451 GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 510
G RLFG+ L+NH SS ++K+ V T + + S + K+
Sbjct: 515 GM-FRLFGVNLVNHTRSSGIADKMTVGVGETSMRGAGSFEDSGQLSALSRVTKDHTHLVN 573
Query: 511 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 570
E SP+E QS QSC S R+R KVQM G AVG+A+DL L GY L+ ELEEMF+IK
Sbjct: 574 E----SPREIQSHQSC--SGRNRIKVQMHGHAVGKAVDLGNLDGYVQLMGELEEMFEIK- 626
Query: 571 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 609
L ++ +W++ +T+DE D M VG W EFC MV++I I
Sbjct: 627 DLGSKEEWKVTFTNDENDTMEVGAVLWQEFCQMVRKIVI 665
>gi|301793205|emb|CBA11993.1| putative auxin response factor 2 [Amborella trichopoda]
Length = 737
Score = 539 bits (1389), Expect = e-150, Method: Compositional matrix adjust.
Identities = 326/681 (47%), Positives = 414/681 (60%), Gaps = 86/681 (12%)
Query: 2 EQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTP 61
EQ+E STNQ +Q +P + LPSKILCRVVN+ L AE +TDEVYAQ+TL+PEP+Q+E TT
Sbjct: 73 EQVEKSTNQGADQPMPNYDLPSKILCRVVNVWLKAEPDTDEVYAQLTLIPEPNQDE-TTL 131
Query: 62 DPCPADSP--RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
+ SP RP V+SF K LTASDTSTHGGFSVLR+HA ECLP LDM+Q PTQELVAK
Sbjct: 132 EKETVQSPPRRPHVYSFCKTLTASDTSTHGGFSVLRRHAEECLPRLDMSQQPPTQELVAK 191
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLHG EWRF+HIFRGQPRRHLLTTGWS FV+SKRLVAGD F+FLRGENGEL VGVR R
Sbjct: 192 DLHGVEWRFRHIFRGQPRRHLLTTGWSAFVSSKRLVAGDAFIFLRGENGELRVGVRRALR 251
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNK 237
QQ++MP+SVISS SMHLGVLATA HA +T TMF V+Y+PRT S+F+I ++Y+E+V N
Sbjct: 252 QQNNMPTSVISSHSMHLGVLATAMHAFSTGTMFSVFYRPRTSPSEFVIPYDQYMESVKNN 311
Query: 238 FAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRV 296
+++GMR++MRFEGE++PE+RF+GT+VGVED+ S W SKWR LKVQWDE +S+ RP RV
Sbjct: 312 YSIGMRFRMRFEGEETPEQRFTGTIVGVEDYDSNRWPASKWRCLKVQWDEQSSVERPLRV 371
Query: 297 SPWEIEPFVASATPNLVQ-PVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQL 355
SPW+IEP SA P + P + + KRPR ++PS + +R +T+
Sbjct: 372 SPWKIEP---SAAPTAINPPPIPRAKRPR-------TNVPSPSDVSHLSREGLPRGMTEH 421
Query: 356 SVTAEDKRI-DNHVAWHHKHSDFSSNSNFMSRTQSDGEWLT------------SPRVKFS 402
S + FSS +N Q W P +
Sbjct: 422 SQPPRYPGVLQGQEGMALVGGPFSSGTNNPQSHQKSSMWAPPLLPPKEDPYPHPPHPNWM 481
Query: 403 QQLFQEAIDDNKNISAWPAHSGHSTPHPSK----PNNDTLL----EQVETGRKTETGTSC 454
L E+ KN P+H P P + P LL +Q G ++G C
Sbjct: 482 SLLRSESPFTGKNP---PSHWA-PFPFPGEKAWPPLGPALLVGREDQKPLGGGLQSG-GC 536
Query: 455 RLFGIELINHATSSA-------PSEKVPVSSLTT------EGHIISTISAA----ADSDG 497
+LFGI L H T A PS L T EG +S S AD+ G
Sbjct: 537 KLFGINLFEHQTEVASHGIAGFPSRGQQQVVLRTPPPVGLEGDQVSEQSKGGGKSADTGG 596
Query: 498 KSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDH 557
+D + P ++QS TS RS TKV MQG A+GR++DLT GY
Sbjct: 597 DTD-------------RPLPHKAQS-----TSTRSCTKVHMQGNALGRSVDLTKFKGYKD 638
Query: 558 LIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEF---CNMVKRIFICSSQ 613
L+ EL+ MF +G+L K W++VYTDDEGDMMLVGDDPW + C MV++I+I + +
Sbjct: 639 LVAELDRMFGFEGELMDPMKGWQVVYTDDEGDMMLVGDDPWQRYREXCVMVRKIYIYTRE 698
Query: 614 DVKKMSPGSKLPMFSIEGEDI 634
+V++M P S S +G D+
Sbjct: 699 EVQRMRPRS----MSQKGHDV 715
>gi|350539990|ref|NP_001234602.1| auxin response factor 12 [Solanum lycopersicum]
gi|310697410|gb|ADP06660.1| auxin response factor 12 [Solanum lycopersicum]
Length = 405
Score = 529 bits (1362), Expect = e-147, Method: Compositional matrix adjust.
Identities = 252/324 (77%), Positives = 280/324 (86%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
MEQLEASTNQELNQ IPLF L KILCRV++I L+AEQ++DEVYAQI LLPE Q EPT+
Sbjct: 58 MEQLEASTNQELNQSIPLFNLQPKILCRVLHIQLLAEQDSDEVYAQIALLPEADQVEPTS 117
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
PD + PRPKVH F KVLTASDTSTHGGFS+LRKHA ECLPPLDM Q+TP QELVAKD
Sbjct: 118 PDLSLPEPPRPKVHFFCKVLTASDTSTHGGFSILRKHANECLPPLDMTQATPAQELVAKD 177
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
LHG+EW FKHIFRGQPRRHLLTTGWSTFV+SKRLV GD+FVFLR GE+ +G+R LARQ
Sbjct: 178 LHGFEWHFKHIFRGQPRRHLLTTGWSTFVSSKRLVTGDSFVFLRSGKGEVRIGIRRLARQ 237
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAV 240
SSMP SVISSQSMHLGVLATASHAV TQTMFVVYYKPRTSQFII LNKYLEAV ++++V
Sbjct: 238 PSSMPQSVISSQSMHLGVLATASHAVTTQTMFVVYYKPRTSQFIIGLNKYLEAVKHRYSV 297
Query: 241 GMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWE 300
GMR+KM+FEGE+ PE+RF+GT+VGVED S WKDSKWRSLKVQWDEPAS+ RPDRVSPW+
Sbjct: 298 GMRFKMKFEGEEIPEKRFTGTIVGVEDSSSQWKDSKWRSLKVQWDEPASVPRPDRVSPWD 357
Query: 301 IEPFVASATPNLVQPVLAKNKRPR 324
IEPFVAS LV P+ KNKR R
Sbjct: 358 IEPFVASVATPLVPPMGVKNKRHR 381
>gi|297832370|ref|XP_002884067.1| hypothetical protein ARALYDRAFT_319704 [Arabidopsis lyrata subsp.
lyrata]
gi|297329907|gb|EFH60326.1| hypothetical protein ARALYDRAFT_319704 [Arabidopsis lyrata subsp.
lyrata]
Length = 597
Score = 522 bits (1345), Expect = e-145, Method: Compositional matrix adjust.
Identities = 297/615 (48%), Positives = 382/615 (62%), Gaps = 81/615 (13%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
+E +EA T +ELN+ P+F LPSK+ CRV+ I L E+ +DE YA+ITL+P+ PT
Sbjct: 55 IELIEAYTREELNKIQPIFDLPSKLQCRVIAIQLKVEKNSDETYAEITLMPDTQVVIPTQ 114
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
D + RP V+SF+KVLTASDTS HGGFSV RK A ECLPPLDM+Q P QEL+ D
Sbjct: 115 ND----NHYRPLVNSFTKVLTASDTSVHGGFSVPRKLAIECLPPLDMSQPLPAQELLTID 170
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
LHG +WRFKH +RG PRRHLLT+GW+ F TSK+LVAGD VFLRGE GEL VG+R Q
Sbjct: 171 LHGNQWRFKHSYRGTPRRHLLTSGWNAFTTSKKLVAGDVIVFLRGETGELRVGIRRAGHQ 230
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAV 240
Q ++ SS+IS SM GV+A+A HA Q MF+V YKPR+SQFI+S NK+++AVNNKF V
Sbjct: 231 QKNIHSSLISIDSMRHGVIASAVHAFNNQCMFIVVYKPRSSQFIVSYNKFVDAVNNKFNV 290
Query: 241 GMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWE 300
G R+ MRFEGED ERR+SGT++GV +FS HW +S+WRSL+V+WDE AS RPD+VSPW+
Sbjct: 291 GSRFTMRFEGEDFSERRYSGTIIGVNNFSSHWMESEWRSLEVKWDEFASFPRPDKVSPWD 350
Query: 301 IEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAE 360
IE S N+++P L KNKR R E+ S +S L Q + + S+T
Sbjct: 351 IEHLTPSL--NVLRPSLLKNKRSREVNEI-----GSTSSHLLHPILTQGQEIGEPSMT-- 401
Query: 361 DKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWP 420
S + F+S + + I+D++ P
Sbjct: 402 -----------------SPMNVFLS--------------------YCDEIEDDET----P 420
Query: 421 AHSGHSTPHPSKP----NNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPV 476
+ S P+ P NND ++ +E T S RLFG+ L ATSS K P+
Sbjct: 421 SRMLMSYHVPTMPKLNYNNDQMVTPIEENITTNANASFRLFGVSL---ATSSVI--KDPI 475
Query: 477 SSLTTEGHIISTISAAADSDGKSDIAKEFKEKK--QEQVQVSPKESQSKQSCLTSNRSRT 534
+ +S KS+I+K +EKK Q SP+E QSKQ +S RS T
Sbjct: 476 EPM--------------ESYPKSEISKLCQEKKLGLGQTITSPREIQSKQ--FSSTRSCT 519
Query: 535 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 594
KVQMQGV VGRALDL L GYDHLI ELE++FD+ GQL TR +W+I + D+EG+ LVGD
Sbjct: 520 KVQMQGVPVGRALDLNVLNGYDHLIIELEKLFDLNGQLQTRNQWKIAFKDNEGNEKLVGD 579
Query: 595 DPWHEFCNMVKRIFI 609
+PW EFC+MVK+IFI
Sbjct: 580 NPWPEFCSMVKKIFI 594
>gi|326501930|dbj|BAK06457.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 763
Score = 522 bits (1345), Expect = e-145, Method: Compositional matrix adjust.
Identities = 304/664 (45%), Positives = 413/664 (62%), Gaps = 62/664 (9%)
Query: 1 MEQLEASTNQEL-NQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE-P 58
+EQL+ T+ L ++I +F++P KILC+VVN+ L AE ETDEVYAQITL P+ Q++ P
Sbjct: 100 LEQLQEPTDSALLAEQIKMFQVPYKILCKVVNVELKAETETDEVYAQITLQPDADQSDLP 159
Query: 59 TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
DP ++PRP VH+F K+LT SDTSTHGGFSVLR+HA ECLPPLDM TPTQE+++
Sbjct: 160 LILDPTLPETPRPVVHTFCKILTPSDTSTHGGFSVLRRHANECLPPLDMTMPTPTQEIIS 219
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
KDLHG EWRFKHI+RGQPRRHLLTTGWSTFVTSK+L+AGD FV+LR E GE VGVR L
Sbjct: 220 KDLHGSEWRFKHIYRGQPRRHLLTTGWSTFVTSKKLMAGDAFVYLRSETGEQRVGVRRLV 279
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNN 236
++QS+MP+SVISSQSMHLGVLA+ASHA+ T ++FVVYY+PR SQ+I+S+NKY A
Sbjct: 280 QKQSTMPASVISSQSMHLGVLASASHAIKTNSIFVVYYRPRLSQSQYIVSVNKYHLASKT 339
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITR-PDR 295
F VGMR++M FE ED P ++F GT+VG DFSP W S+W+SLKVQWD+ +I P+R
Sbjct: 340 GFTVGMRFRMNFEAEDVPVKKFFGTIVGDGDFSPQWSGSEWKSLKVQWDDSVAICNGPER 399
Query: 296 VSPWEIEPFVAS--ATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAP--WSARLAQSHN 351
VSPWEI+ S A L+Q AKNKRPR + E ++LPS W + + Q H
Sbjct: 400 VSPWEIDSSDVSSPAISTLLQSS-AKNKRPRETNE--NMNLPSQEPTQEFWLSGVTQQHE 456
Query: 352 LTQLSVTAEDKRID----NHVAWHHKHSDFSS-NSNFMSRTQ---SDGEWL--------- 394
T + +++ RI + + W +H+ + + +S+ + +T DG W
Sbjct: 457 RTYVG-SSDPNRISGSGYHQILWPSEHAGYGAMSSSSVCQTPLGLGDG-WFKDFNTSSQG 514
Query: 395 TSPRV-KFSQQLFQEAIDDNKNISAWPAH--SGHSTPHPSK--------PNNDTLLEQV- 442
SP + + +Q+L + A + + W G+ P+ P L EQV
Sbjct: 515 VSPTLSEITQKLNRVASSEGRAPPPWATALCGGYRAEEPTSKLSCNATLPLPSPLTEQVA 574
Query: 443 ----ETGRKTETGTSCRLFGIELIN--HATSSAPSEKVPVSSLTTEGHIISTISAAADSD 496
+ K + RLFG+ L+ + ++A + V + T I ++ +
Sbjct: 575 PYLLKVAEKVKGPGMVRLFGVNLMENTNNAAAATAGNASVGAGETSARITGSVEGSGQLS 634
Query: 497 GKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYD 556
S + K E SP+E QS+QS + R+R KVQM G AVGRA+DL +L GY+
Sbjct: 635 AFSKVTKVVNE--------SPREIQSQQSSI--GRNRVKVQMHGNAVGRAVDLASLDGYE 684
Query: 557 HLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVK 616
L +ELE+MF+IK + +++ + D+EGD M VGDDPW EFC MV++I I +D K
Sbjct: 685 RLTNELEQMFEIK---DIKQNFKVAFNDNEGDTMKVGDDPWMEFCRMVRKIVIYPIEDDK 741
Query: 617 KMSP 620
M P
Sbjct: 742 NMDP 745
>gi|42562523|ref|NP_174701.2| auxin response factor 21 [Arabidopsis thaliana]
gi|46576639|sp|Q9C8N9.2|ARFU_ARATH RecName: Full=Putative auxin response factor 21
gi|332193589|gb|AEE31710.1| auxin response factor 21 [Arabidopsis thaliana]
Length = 606
Score = 522 bits (1344), Expect = e-145, Method: Compositional matrix adjust.
Identities = 289/619 (46%), Positives = 386/619 (62%), Gaps = 79/619 (12%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE-PT 59
+E ++AST +ELN+ P+ LPSK+ CRV+ IHL E +DE+YA+ITL+P+ +Q PT
Sbjct: 54 IELVQASTREELNELQPICDLPSKLQCRVIAIHLKVENNSDEIYAEITLMPDTTQVVIPT 113
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
+ + RP V+SF+KVLTASDTS +GGFSV +KHA ECLPPLDM+Q P QE++A
Sbjct: 114 QSE----NRFRPLVNSFTKVLTASDTSAYGGFSVPKKHAIECLPPLDMSQPLPAQEILAI 169
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH +WRF+H +RG P+RH LTTGW+ F+TSK+LV GD VF+RGE GEL VG+R
Sbjct: 170 DLHDNQWRFRHNYRGTPQRHSLTTGWNEFITSKKLVKGDVIVFVRGETGELRVGIRRARH 229
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFA 239
QQ ++PSS++S M GV+A+A HA Q +F+V YKPR+SQFI+S +K+L+AVNNKF
Sbjct: 230 QQGNIPSSIVSIDCMRHGVIASAKHAFDNQCIFIVVYKPRSSQFIVSYDKFLDAVNNKFN 289
Query: 240 VGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPW 299
VG R+ MRFEG+D ERR+ GT++GV DFSPHWK S+WRSL+VQWDE AS +RP++VSPW
Sbjct: 290 VGSRFTMRFEGDDFSERRYFGTIIGVSDFSPHWKCSEWRSLEVQWDEFASFSRPNKVSPW 349
Query: 300 EIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTA 359
EIE V + N+ + L KNKR R E S++S L Q + QLSV
Sbjct: 350 EIEHLVPAL--NVPRSSLLKNKRLREVNE-----FGSSSSHLLPPILTQGQEIGQLSV-- 400
Query: 360 EDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAW 419
+S N R + E A++ ++ + ++
Sbjct: 401 ------------------ASPMNISLRYRDTTE---------------AAMNPSRLLMSY 427
Query: 420 PAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSL 479
P P P N+ ++ Q+E T+ GT+ RLFG+ L + P K P+ +
Sbjct: 428 PVQ-----PMPKLNYNNQMVTQIEENITTKAGTNFRLFGVTL-----DTPPMIKDPIKQI 477
Query: 480 TTEGHIISTISAAADSDGKSDIAKEFKEKK--QEQVQVSPKESQSKQSCLTSNRSRTKVQ 537
SDI+K + KK Q Q SP E QSKQ +S+R+ TKVQ
Sbjct: 478 G------------------SDISKLTERKKFGQSQTLRSPIEIQSKQ--FSSSRTCTKVQ 517
Query: 538 MQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPW 597
MQGV +GRA+DL+ L GYD LI ELE++FDIKGQL TR +W+I +TD +G MLVGDDPW
Sbjct: 518 MQGVTIGRAVDLSVLNGYDQLILELEKLFDIKGQLQTRNQWKIAFTDSDGYEMLVGDDPW 577
Query: 598 HEFCNMVKRIFICSSQDVK 616
EFC MVK+I I S ++VK
Sbjct: 578 PEFCKMVKKILIYSKEEVK 596
>gi|12322942|gb|AAG51458.1|AC069160_4 hypothetical protein [Arabidopsis thaliana]
Length = 615
Score = 520 bits (1339), Expect = e-144, Method: Compositional matrix adjust.
Identities = 285/623 (45%), Positives = 388/623 (62%), Gaps = 78/623 (12%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE-PT 59
+E ++AST +ELN+ P+ LPSK+ CRV+ IHL E +DE YA+ITL+P+ +Q PT
Sbjct: 54 IELVDASTREELNELQPICDLPSKLQCRVIAIHLKVENNSDETYAEITLMPDTTQVVIPT 113
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
+ + RP V+SF+KVLTASDTS +GGF V +KHA ECLPPLDM+Q P QEL+AK
Sbjct: 114 QSE----NQFRPLVNSFTKVLTASDTSAYGGFFVPKKHAIECLPPLDMSQPLPAQELLAK 169
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLHG +WRF+H +RG P+RH LTTGW+ F TSK+LV GD VF+RGE GEL VG+R
Sbjct: 170 DLHGNQWRFRHSYRGTPQRHSLTTGWNEFTTSKKLVKGDVIVFVRGETGELRVGIRRARH 229
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFA 239
QQ ++PSS++S M GV+A+A HA+ Q +F+V YKPR+SQFI+S +K+L+A+NNKF
Sbjct: 230 QQGNIPSSIVSIDCMRHGVIASAKHALDNQCIFIVVYKPRSSQFIVSYDKFLDAMNNKFI 289
Query: 240 VGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPW 299
VG R+ MRFEG+D ERR+ GT++GV DFSPHWK S+WRSL+VQWDE AS +RP++VSPW
Sbjct: 290 VGSRFTMRFEGDDFSERRYFGTIIGVNDFSPHWKCSEWRSLEVQWDEFASFSRPNKVSPW 349
Query: 300 EIEPFVASATPNLVQPVLAKNKRPRLSME----VPPLDLPSAASAPWSARLAQSHNLTQL 355
EIE +++ N+ + L KNKR R ++E + L S++S L Q + QL
Sbjct: 350 EIEHLMSAL--NVPRSSLLKNKRLRETLEYLLNILVLYTCSSSSHILPPILTQGQEIGQL 407
Query: 356 SVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKN 415
SV + N++ R + ++A++ ++
Sbjct: 408 SVAS------------------PMNTSLRYRDTT-----------------EDAMNPSRL 432
Query: 416 ISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVP 475
+ ++P P P N+ ++ Q+E T+ T+ RLFG+ L P E++
Sbjct: 433 LMSYPVQ-----PMPKLNYNNQMVTQIEENITTKAVTNFRLFGVSLAIPLVIKDPIEEI- 486
Query: 476 VSSLTTEGHIISTISAAADSDGKSDIAK--EFKEKKQEQVQVSPKESQSKQSCLTSNRSR 533
SDI+K E K+ Q Q SP E QSKQ S R+
Sbjct: 487 ----------------------GSDISKLTEGKKFGQSQTLRSPIEIQSKQ--FGSTRTC 522
Query: 534 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVG 593
TKVQMQGV +GRA+DL+ L GYD LI ELE++FD+KGQL TR +W+I +TD +G MLVG
Sbjct: 523 TKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQTRNQWKIAFTDSDGYEMLVG 582
Query: 594 DDPWHEFCNMVKRIFICSSQDVK 616
DDPW EFC MVK+I I S ++VK
Sbjct: 583 DDPWPEFCKMVKKILIYSKEEVK 605
>gi|12323856|gb|AAG51897.1|AC023913_5 auxin response factor, putative; 32824-28369 [Arabidopsis thaliana]
Length = 620
Score = 516 bits (1329), Expect = e-143, Method: Compositional matrix adjust.
Identities = 289/621 (46%), Positives = 386/621 (62%), Gaps = 81/621 (13%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE-PT 59
+E ++AST +ELN+ P+ LPSK+ CRV+ IHL E +DE+YA+ITL+P+ +Q PT
Sbjct: 66 IELVQASTREELNELQPICDLPSKLQCRVIAIHLKVENNSDEIYAEITLMPDTTQVVIPT 125
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
+ + RP V+SF+KVLTASDTS +GGFSV +KHA ECLPPLDM+Q P QE++A
Sbjct: 126 QSE----NRFRPLVNSFTKVLTASDTSAYGGFSVPKKHAIECLPPLDMSQPLPAQEILAI 181
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH +WRF+H +RG P+RH LTTGW+ F+TSK+LV GD VF+RGE GEL VG+R
Sbjct: 182 DLHDNQWRFRHNYRGTPQRHSLTTGWNEFITSKKLVKGDVIVFVRGETGELRVGIRRARH 241
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKP--RTSQFIISLNKYLEAVNNK 237
QQ ++PSS++S M GV+A+A HA Q +F+V YKP R+SQFI+S +K+L+AVNNK
Sbjct: 242 QQGNIPSSIVSIDCMRHGVIASAKHAFDNQCIFIVVYKPSIRSSQFIVSYDKFLDAVNNK 301
Query: 238 FAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVS 297
F VG R+ MRFEG+D ERR+ GT++GV DFSPHWK S+WRSL+VQWDE AS +RP++VS
Sbjct: 302 FNVGSRFTMRFEGDDFSERRYFGTIIGVSDFSPHWKCSEWRSLEVQWDEFASFSRPNKVS 361
Query: 298 PWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSV 357
PWEIE V + N+ + L KNKR R E S++S L Q + QLSV
Sbjct: 362 PWEIEHLVPAL--NVPRSSLLKNKRLREVNE-----FGSSSSHLLPPILTQGQEIGQLSV 414
Query: 358 TAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNIS 417
+S N R + E A++ ++ +
Sbjct: 415 --------------------ASPMNISLRYRDTTE---------------AAMNPSRLLM 439
Query: 418 AWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVS 477
++P P P N+ ++ Q+E T+ GT+ RLFG+ L + P K P+
Sbjct: 440 SYPVQ-----PMPKLNYNNQMVTQIEENITTKAGTNFRLFGVTL-----DTPPMIKDPIK 489
Query: 478 SLTTEGHIISTISAAADSDGKSDIAKEFKEKK--QEQVQVSPKESQSKQSCLTSNRSRTK 535
+ SDI+K + KK Q Q SP E QSKQ +S+R+ TK
Sbjct: 490 QIG------------------SDISKLTERKKFGQSQTLRSPIEIQSKQ--FSSSRTCTK 529
Query: 536 VQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDD 595
VQMQGV +GRA+DL+ L GYD LI ELE++FDIKGQL TR +W+I +TD +G MLVGDD
Sbjct: 530 VQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIKGQLQTRNQWKIAFTDSDGYEMLVGDD 589
Query: 596 PWHEFCNMVKRIFICSSQDVK 616
PW EFC MVK+I I S ++VK
Sbjct: 590 PWPEFCKMVKKILIYSKEEVK 610
>gi|46576661|sp|Q9LQE3.2|ARFO_ARATH RecName: Full=Putative auxin response factor 15
Length = 593
Score = 515 bits (1327), Expect = e-143, Method: Compositional matrix adjust.
Identities = 283/617 (45%), Positives = 380/617 (61%), Gaps = 89/617 (14%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPE------PS 54
+E +EAST +ELN+ P+ LPSK+ CRV+ IHL E +DE YA+ITL+P+ P+
Sbjct: 54 IELVEASTREELNELQPICDLPSKLQCRVIAIHLKVENNSDETYAKITLMPDTTQVVIPT 113
Query: 55 QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQ 114
QNE + RP V+SF+KVLTASD S +G FSV +KHA ECLPPLDM+Q P Q
Sbjct: 114 QNE---------NQFRPLVNSFTKVLTASDISANGVFSVPKKHAIECLPPLDMSQPLPAQ 164
Query: 115 ELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGV 174
EL+A DLHG +W F+H +RG P+RHLLTTGW+ F TSK+LV GD VF+RGE GEL VG+
Sbjct: 165 ELLAIDLHGNQWSFRHSYRGTPQRHLLTTGWNEFTTSKKLVKGDVIVFVRGETGELRVGI 224
Query: 175 RCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAV 234
R QQ ++PSS++S M GV+A+A HA Q MF+V YKPR+SQFI+S +K+L+AV
Sbjct: 225 RRARHQQGNIPSSIVSIDCMRHGVIASAKHAFDNQCMFIVVYKPRSSQFIVSYDKFLDAV 284
Query: 235 NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPD 294
NNKF VG R+ MRFEG+D ERR+ GT++GV +FSPHWK S WRSL+VQWDE AS RP+
Sbjct: 285 NNKFNVGSRFTMRFEGDDLSERRYFGTIIGVSNFSPHWKCSDWRSLEVQWDEFASFLRPN 344
Query: 295 RVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQ 354
+VSPWEIE + + N+ + KNKR R E S++S L Q + Q
Sbjct: 345 KVSPWEIEHLMPAL--NVPRSSFLKNKRLREVNE-----FGSSSSHLLPPILTQGQEIGQ 397
Query: 355 LSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNK 414
LSV + N + + R ++ +A++ ++
Sbjct: 398 LSVAS------------------PMNISLLYRETTE-----------------DAMNPSR 422
Query: 415 NISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKV 474
+ ++P P P + N+ ++ Q+E T+ GT+ RLFG+ L ++ P K
Sbjct: 423 LLMSYPVQ-----PMPKRNYNNQMVTQIEENITTKAGTNFRLFGVSL-----ATPPVIKD 472
Query: 475 PVSSLTTEGHIISTISAAADSDGKSDIAK--EFKEKKQEQVQVSPKESQSKQSCLTSNRS 532
P+ + SDI+K E K+ Q Q SP + QSKQ +S R+
Sbjct: 473 PIEQI------------------GSDISKLTEGKKFGQSQTLRSPTKIQSKQ--FSSTRT 512
Query: 533 RTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLV 592
TKVQMQGV +GRA+DL+ L GYD LI ELE++FD+KGQL TR +W+I++T + D MLV
Sbjct: 513 CTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQTRNQWKIIFTGSDEDEMLV 572
Query: 593 GDDPWHEFCNMVKRIFI 609
GDDPW EFCNMVKRI+I
Sbjct: 573 GDDPWPEFCNMVKRIYI 589
>gi|15219633|ref|NP_174784.1| auxin response factor 15 [Arabidopsis thaliana]
gi|332193684|gb|AEE31805.1| auxin response factor 15 [Arabidopsis thaliana]
Length = 598
Score = 513 bits (1322), Expect = e-142, Method: Compositional matrix adjust.
Identities = 283/622 (45%), Positives = 380/622 (61%), Gaps = 94/622 (15%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPE-------- 52
+E +EAST +ELN+ P+ LPSK+ CRV+ IHL E +DE YA+ITL+P+
Sbjct: 54 IELVEASTREELNELQPICDLPSKLQCRVIAIHLKVENNSDETYAKITLMPDTTVSENLQ 113
Query: 53 ---PSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQ 109
P+QNE + RP V+SF+KVLTASD S +G FSV +KHA ECLPPLDM+Q
Sbjct: 114 VVIPTQNE---------NQFRPLVNSFTKVLTASDISANGVFSVPKKHAIECLPPLDMSQ 164
Query: 110 STPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGE 169
P QEL+A DLHG +W F+H +RG P+RHLLTTGW+ F TSK+LV GD VF+RGE GE
Sbjct: 165 PLPAQELLAIDLHGNQWSFRHSYRGTPQRHLLTTGWNEFTTSKKLVKGDVIVFVRGETGE 224
Query: 170 LHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNK 229
L VG+R QQ ++PSS++S M GV+A+A HA Q MF+V YKPR+SQFI+S +K
Sbjct: 225 LRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKHAFDNQCMFIVVYKPRSSQFIVSYDK 284
Query: 230 YLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPAS 289
+L+AVNNKF VG R+ MRFEG+D ERR+ GT++GV +FSPHWK S WRSL+VQWDE AS
Sbjct: 285 FLDAVNNKFNVGSRFTMRFEGDDLSERRYFGTIIGVSNFSPHWKCSDWRSLEVQWDEFAS 344
Query: 290 ITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQS 349
RP++VSPWEIE + + N+ + KNKR R E S++S L Q
Sbjct: 345 FLRPNKVSPWEIEHLMPAL--NVPRSSFLKNKRLREVNE-----FGSSSSHLLPPILTQG 397
Query: 350 HNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEA 409
+ QLSV + N + + R ++ +A
Sbjct: 398 QEIGQLSVAS------------------PMNISLLYRETTE-----------------DA 422
Query: 410 IDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSA 469
++ ++ + ++P P P + N+ ++ Q+E T+ GT+ RLFG+ L ++
Sbjct: 423 MNPSRLLMSYPVQ-----PMPKRNYNNQMVTQIEENITTKAGTNFRLFGVSL-----ATP 472
Query: 470 PSEKVPVSSLTTEGHIISTISAAADSDGKSDIAK--EFKEKKQEQVQVSPKESQSKQSCL 527
P K P+ + SDI+K E K+ Q Q SP + QSKQ
Sbjct: 473 PVIKDPIEQI------------------GSDISKLTEGKKFGQSQTLRSPTKIQSKQ--F 512
Query: 528 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEG 587
+S R+ TKVQMQGV +GRA+DL+ L GYD LI ELE++FD+KGQL TR +W+I++T +
Sbjct: 513 SSTRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQTRNQWKIIFTGSDE 572
Query: 588 DMMLVGDDPWHEFCNMVKRIFI 609
D MLVGDDPW EFCNMVKRI+I
Sbjct: 573 DEMLVGDDPWPEFCNMVKRIYI 594
>gi|79356673|ref|NP_174699.2| auxin response factor 22 [Arabidopsis thaliana]
gi|46576638|sp|Q9C8N7.2|ARFV_ARATH RecName: Full=Auxin response factor 22
gi|49616367|gb|AAT67080.1| ARF22 [Arabidopsis thaliana]
gi|332193587|gb|AEE31708.1| auxin response factor 22 [Arabidopsis thaliana]
Length = 598
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 290/615 (47%), Positives = 383/615 (62%), Gaps = 87/615 (14%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPE------PS 54
+E +EAST +ELN+ P+ LPSK+ CRV+ I L E +DE YA+ITL+P+ P+
Sbjct: 54 IELVEASTREELNELKPICDLPSKLQCRVIAIQLKVENNSDETYAEITLMPDTTQVVIPT 113
Query: 55 QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQ 114
QNE + RP V+SF+KVLTASDTS GGF V +KHA ECLPPLDM+Q PTQ
Sbjct: 114 QNE---------NQFRPLVNSFTKVLTASDTS--GGFFVPKKHAIECLPPLDMSQPLPTQ 162
Query: 115 ELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGV 174
EL+A DLHG +WRF H +RG P+RHLLTTGW+ F TSK+LVAGD VF+RGE GEL VG+
Sbjct: 163 ELLATDLHGNQWRFNHNYRGTPQRHLLTTGWNAFTTSKKLVAGDVIVFVRGETGELRVGI 222
Query: 175 RCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAV 234
R QQ ++PSS+IS +SM GV+A+A HA Q MF+V YKPR+SQFI+S +K+L+AV
Sbjct: 223 RRAGHQQGNIPSSIISIESMRHGVIASAKHAFDNQCMFIVVYKPRSSQFIVSYDKFLDAV 282
Query: 235 NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPD 294
NNKF VG R+ MRFEG+D ERR+ GT++GV DFSPHWK S+WR+L+VQWDE AS +RP+
Sbjct: 283 NNKFNVGSRFTMRFEGDDFSERRYFGTIIGVSDFSPHWKCSEWRNLEVQWDEFASFSRPN 342
Query: 295 RVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQ 354
+VSPWEIE + + N+ +P L KNKR R E+ S++S L Q + Q
Sbjct: 343 KVSPWEIEHLMPAL--NVPRPSLLKNKRLREVNEI-----GSSSSHLLPPILTQGQEIGQ 395
Query: 355 LSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNK 414
LSV + N + R ++ + ++ ++
Sbjct: 396 LSVAS------------------PMNISLTYRDTTE-----------------DVMNPSR 420
Query: 415 NISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKV 474
+ ++P P P N+ ++ Q+E T+TGT+ RLFG+ L+ + P E++
Sbjct: 421 LLMSYPVQ-----PMPKLNYNNQMVTQIEENITTKTGTNFRLFGVSLVTPSVIKDPIEEI 475
Query: 475 PVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRT 534
G IS ++ E K+ Q Q SP E QSKQ +S R+ T
Sbjct: 476 --------GSEISKLT-------------EGKKFGQSQTLRSPTEIQSKQ--FSSTRTCT 512
Query: 535 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 594
KVQMQGV + RA+DL+ L GYD LI ELEE+FD+KGQL TR +WEI +TD + D MLVGD
Sbjct: 513 KVQMQGVTIERAVDLSVLNGYDQLILELEELFDLKGQLQTRNQWEIAFTDSDDDKMLVGD 572
Query: 595 DPWHEFCNMVKRIFI 609
DPW EFCNMVK+I I
Sbjct: 573 DPWPEFCNMVKKILI 587
>gi|297851862|ref|XP_002893812.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297339654|gb|EFH70071.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 625
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 280/628 (44%), Positives = 386/628 (61%), Gaps = 80/628 (12%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
+E +EAST EL+Q P F LPSK+ C V +I L +Q TD+VYA+I L+P+ + + T
Sbjct: 54 IELIEASTKDELDQIRPHFDLPSKLRCCVDDIQLKIDQNTDDVYAEIYLMPDTT--DVIT 111
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
P D+ RP V+SFSK+LT+SD +THGG S+L++HATECLPPLDM+Q TP Q LVAKD
Sbjct: 112 P-ITTMDNQRPMVYSFSKILTSSDANTHGGLSILKRHATECLPPLDMSQRTPMQHLVAKD 170
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
LHG EW FKH FRG PRRHL T+GWS F T+KRL+ GD FVFLRGENGEL VG+R Q
Sbjct: 171 LHGREWTFKHSFRGTPRRHLFTSGWSLFATTKRLIVGDAFVFLRGENGELGVGIRRARHQ 230
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAV 240
PS VIS+Q M GV+A+ +A ++ F+V YKP +SQF+++ +K+++A+NNKF V
Sbjct: 231 LGHKPSLVISTQCMKDGVIASVVNAFKSKCKFIVVYKPSSSQFVVNYDKFVDAMNNKFIV 290
Query: 241 GMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWE 300
G R++MRFEG+D E+R+SGT++GV D SPHWKDS+WRSL+VQWDE + RPD+VSPWE
Sbjct: 291 GSRFRMRFEGQDFSEKRYSGTIIGVNDMSPHWKDSEWRSLQVQWDELSPFPRPDKVSPWE 350
Query: 301 IEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAE 360
IE + S++ + QP + + KR R E+
Sbjct: 351 IEHLIPSSS--ISQPTVLQKKRARQCNEIG------------------------------ 378
Query: 361 DKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRV--KFSQQLFQEAIDDNKNISA 418
S++SN ++ + L+SP+ +FS ++A++D+K S
Sbjct: 379 -----------------STSSNLLTGQEIGQSSLSSPKSVPEFS---CRDAVEDSKFPSD 418
Query: 419 WPAHSGHSTPHPSKPNNDT--LLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPV 476
W P KPNN+ L++Q + TE TSC LFG++L + + P +
Sbjct: 419 WLM--SDLVPAIPKPNNNNNQLVQQTKEKITTEATTSCILFGVDLTKASKTKDPMGPIEA 476
Query: 477 SSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKV 536
+ TT S I + K+ Q SPKE QS S S R R KV
Sbjct: 477 TETTT-----------------SCILSQDKKLDQTLTWTSPKEVQS--SKFNSTRRRIKV 517
Query: 537 QMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDP 596
QMQGV +GRA+DLT GY+ LI +LEE+FD+K +L +R +WEIV+ ++EG++M +GDDP
Sbjct: 518 QMQGVVIGRAVDLTVFHGYNQLIQKLEELFDLKDELRSRNQWEIVFINNEGNVMPLGDDP 577
Query: 597 WHEFCNMVKRIFICSSQDVKKMSPGSKL 624
W EFCNM K+IFI S ++++KM +K+
Sbjct: 578 WPEFCNMAKKIFIGSKEEIEKMKSRNKV 605
>gi|357127755|ref|XP_003565543.1| PREDICTED: auxin response factor 1-like [Brachypodium distachyon]
Length = 701
Score = 509 bits (1312), Expect = e-141, Method: Compositional matrix adjust.
Identities = 300/657 (45%), Positives = 411/657 (62%), Gaps = 53/657 (8%)
Query: 1 MEQLEASTNQE-LNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQN-EP 58
+EQ++ ++Q+ L +I +F++P KILCRVVN+ L AE ET+EVYAQITLLPE Q P
Sbjct: 41 LEQVQQPSDQKVLADQIKMFQVPYKILCRVVNVELKAEVETEEVYAQITLLPEQDQEYLP 100
Query: 59 TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
++PDP + RP VHSFSK+LT SDTSTHGGFSVLR+HA ECLPPLDM+ TPTQEL+
Sbjct: 101 SSPDPPLPEVRRPVVHSFSKILTPSDTSTHGGFSVLRRHANECLPPLDMSMPTPTQELIC 160
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
KD+ G EWRFKHI+RGQPRRHLLTTGWSTFVTSK+LV GD FV+LR E GE VGVR
Sbjct: 161 KDILGSEWRFKHIYRGQPRRHLLTTGWSTFVTSKKLVYGDAFVYLRTEEGEQRVGVRHHV 220
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNN 236
+++++MPSSV+SSQSMHLGVLA+ASHA+ T+++F+VYY+PR SQ+I+++NKY
Sbjct: 221 QKRTAMPSSVMSSQSMHLGVLASASHALQTKSIFLVYYRPRVSQSQYIVNVNKYFLTSKL 280
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRV 296
++ VG+R+KM FEGE+ P ++FSGT+VG SP W S+W+S KVQWD+PA+ P+RV
Sbjct: 281 RYTVGVRFKMSFEGEEVPVKKFSGTIVGDGALSPQWSCSEWKSKKVQWDDPANCNGPERV 340
Query: 297 SPWEIEPFVASATPNLVQPVL---AKNKRPRLSMEVPPLDLPSAASAPWSARLA---QSH 350
SPWEIEP +A+ + + L +NKRPR + E LDL S L+ + H
Sbjct: 341 SPWEIEPADGAASASTINVPLQSSIRNKRPRETTE--DLDLQSLNPTTQEFSLSGMPRQH 398
Query: 351 NLTQLSVTAEDKRI-DNHVAW-HHKHSDFSS--NSNFMSRTQSDGEWL---------TSP 397
+ + ++ I N V W + + +S+ +S+F + WL SP
Sbjct: 399 DKIGDGPSNPNRMIPGNQVIWPGERAAGYSAVGSSSFCQKPLVRESWLEEFNLSRQAMSP 458
Query: 398 RV-KFSQQLFQEAIDDNKNISAWPAHSGHSTPHPS--KPNNDTL-----------LEQVE 443
+ + SQ+L+Q +D + + WP + P+ P N L L +V
Sbjct: 459 TLSEISQKLYQVTRNDAR-AAPWPVLPAYQAQQPALRLPCNTALHSYRTEEAAPSLPKV- 516
Query: 444 TGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAK 503
T + E G RLFG+ L+ + +A ++ + T + + S + K
Sbjct: 517 TEKSKEPGM-VRLFGVNLMKPTSGTATADNAGAGAGETSARVAGPCEESGQVSALSRVTK 575
Query: 504 EFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELE 563
+ K V SP+E QS QSC+ R+R KVQM G AVGRA+DL L GY+ LI ELE
Sbjct: 576 DHK-----VVNESPREIQSNQSCIA--RNRVKVQMHGNAVGRAVDLANLDGYEQLIRELE 628
Query: 564 EMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 620
+MFDIK + +++ + D++GD M VGDDPW EFC MVK+I I ++ +KM P
Sbjct: 629 QMFDIK---DIKQNFKVAFADNDGDTMKVGDDPWMEFCRMVKKIVIYPLEE-EKMEP 681
>gi|15219635|ref|NP_174786.1| auxin response factor 14 [Arabidopsis thaliana]
gi|46576662|sp|Q9LQE8.2|ARFN_ARATH RecName: Full=Putative auxin response factor 14
gi|332193688|gb|AEE31809.1| auxin response factor 14 [Arabidopsis thaliana]
Length = 605
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 279/622 (44%), Positives = 381/622 (61%), Gaps = 82/622 (13%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
+E +EAST +ELN+ P+ PSK+ CRV+ I L E +DE YA+ITL+P+ +Q T
Sbjct: 54 IELVEASTREELNELQPICDFPSKLQCRVIAIQLKVENNSDETYAEITLMPDTTQVVIPT 113
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
+ + RP V+SF+KVLTASDTS HGGFSV +KHA ECLPPLDM+Q PTQE++A D
Sbjct: 114 QN---QNQFRPLVNSFTKVLTASDTSVHGGFSVPKKHAIECLPPLDMSQPLPTQEILAID 170
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
LHG +WRF+HI+RG +RHLLT GW+ F TSK+LV GD VF+RGE GEL VG+R Q
Sbjct: 171 LHGNQWRFRHIYRGTAQRHLLTIGWNAFTTSKKLVEGDVIVFVRGETGELRVGIRRAGHQ 230
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAV 240
Q ++PSS++S +SM G++A+A HA Q MF+V YKPR+SQFI+S +K+L+ VNNKF V
Sbjct: 231 QGNIPSSIVSIESMRHGIIASAKHAFDNQCMFIVVYKPRSSQFIVSYDKFLDVVNNKFNV 290
Query: 241 GMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWE 300
G R+ MRFEG+D ERR GT++GV DFSPHWK S+WRSL+VQWDE AS RP++VSPW+
Sbjct: 291 GSRFTMRFEGDDFSERRSFGTIIGVSDFSPHWKCSEWRSLEVQWDEFASFPRPNQVSPWD 350
Query: 301 IEPFVASATP--NLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVT 358
IE TP N+ + KNKR R E+ S++S L Q + Q S+
Sbjct: 351 IEHL----TPWSNVSRSSFLKNKRSREVNEI-----GSSSSHLLPPTLTQGQEIGQQSM- 400
Query: 359 AEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISA 418
++ N R + + ++A+ ++ + +
Sbjct: 401 -------------------ATPMNISLRYRD---------------ITEDAMTPSRLLMS 426
Query: 419 WPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSS 478
+P +K N + ++ +E T S RLFG+ L + P E++ +
Sbjct: 427 YPVQPM------AKLNYNNVVTPIEENITTNAVASFRLFGVSLATPSVIKDPVEQIGL-- 478
Query: 479 LTTEGHIISTISAAADSDGKSDIAKEFKEKK--QEQVQVSPKESQSKQSCLTSNRSRTKV 536
+I++ +EKK Q Q+ SP E QSKQ +S R+ TKV
Sbjct: 479 ---------------------EISRLTQEKKFGQSQILRSPTEIQSKQ--FSSTRTCTKV 515
Query: 537 QMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDP 596
QMQGV +GRA+DL+ L GYD LI ELE++FD+KGQL R +WEI +T++E D MLVG+DP
Sbjct: 516 QMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQARNQWEIAFTNNEEDKMLVGEDP 575
Query: 597 WHEFCNMVKRIFICSSQDVKKM 618
W EFCNMVK+IFI S ++VK +
Sbjct: 576 WPEFCNMVKKIFIYSKEEVKNL 597
>gi|42562516|ref|NP_174691.2| auxin response factor 12 [Arabidopsis thaliana]
gi|46576671|sp|Q9XID4.2|ARFL_ARATH RecName: Full=Auxin response factor 12
gi|49616359|gb|AAT67076.1| ARF12 [Arabidopsis thaliana]
gi|225898000|dbj|BAH30332.1| hypothetical protein [Arabidopsis thaliana]
gi|332193574|gb|AEE31695.1| auxin response factor 12 [Arabidopsis thaliana]
Length = 593
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 286/615 (46%), Positives = 375/615 (60%), Gaps = 85/615 (13%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPE------PS 54
+E +E ST +ELN+ P+ LPSK+ CRV+ IHL E +DE YA+ITL+P+ P+
Sbjct: 54 IELVETSTREELNELQPICDLPSKLQCRVIAIHLKVENNSDETYAEITLMPDTTQVVIPT 113
Query: 55 QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQ 114
QNE + RP V+SF+KVLTASDTS HGGF V +KHA ECLP LDM+Q P Q
Sbjct: 114 QNE---------NQFRPLVNSFTKVLTASDTSAHGGFFVPKKHAIECLPSLDMSQPLPAQ 164
Query: 115 ELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGV 174
EL+A DLHG +WRF H +RG P+RHLLTTGW+ F TSK+LVAGD VF+RGE GEL VG+
Sbjct: 165 ELLAIDLHGNQWRFNHNYRGTPQRHLLTTGWNAFTTSKKLVAGDVIVFVRGETGELRVGI 224
Query: 175 RCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAV 234
R QQ ++PSS++S M GV+A+A HA Q MF V YKPR+S+FI+S +K+L+AV
Sbjct: 225 RRARHQQGNIPSSIVSIDCMRHGVVASAKHAFDNQCMFTVVYKPRSSKFIVSYDKFLDAV 284
Query: 235 NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPD 294
NNKF VG R+ MR EG+D ERR GT++GV DFSPHWK S+WRSL+VQWDE S P
Sbjct: 285 NNKFNVGSRFTMRLEGDDFSERRCFGTIIGVSDFSPHWKCSEWRSLEVQWDEFTSFPGPK 344
Query: 295 RVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQ 354
+VSPW+IE + + N+ + L KNKR R E+ S++S L Q Q
Sbjct: 345 KVSPWDIEHLMPAI--NVPRSFLLKNKRLREVNEI-----GSSSSHLLPPILTQGQENEQ 397
Query: 355 LSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNK 414
LSV +S N R + E +A++ +K
Sbjct: 398 LSV--------------------ASPMNISLRYRDATE---------------DAMNPSK 422
Query: 415 NISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKV 474
+ ++P P P N+ ++ ++E T+TGT+ RLFG+ L + P K
Sbjct: 423 LLMSYPVQ-----PMPKLNYNNQMVTEMEENITTKTGTNFRLFGVTL-----DTPPVIKD 472
Query: 475 PVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRT 534
P+ + +E IS ++ E K+ Q SP E Q+KQ +S+R+ T
Sbjct: 473 PIEEIGSE---ISKLT-------------EGKKFGLSQTLRSPTEIQNKQ--FSSSRTCT 514
Query: 535 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 594
KVQMQGV +GRA+DL+ L GYD LI ELE++FDIKGQL TR +WEI +TD + D MLVGD
Sbjct: 515 KVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIKGQLQTRNQWEIAFTDSDEDKMLVGD 574
Query: 595 DPWHEFCNMVKRIFI 609
DPW EFCNMVK+IFI
Sbjct: 575 DPWPEFCNMVKKIFI 589
>gi|12323853|gb|AAG51894.1|AC023913_2 auxin response factor, putative; 53188-50111 [Arabidopsis thaliana]
Length = 600
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 291/617 (47%), Positives = 383/617 (62%), Gaps = 89/617 (14%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPE------PS 54
+E +EAST +ELN+ P+ LPSK+ CRV+ I L E +DE YA+ITL+P+ P+
Sbjct: 54 IELVEASTREELNELKPICDLPSKLQCRVIAIQLKVENNSDETYAEITLMPDTTQVVIPT 113
Query: 55 QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQ 114
QNE + RP V+SF+KVLTASDTS GGF V +KHA ECLPPLDM+Q PTQ
Sbjct: 114 QNE---------NQFRPLVNSFTKVLTASDTS--GGFFVPKKHAIECLPPLDMSQPLPTQ 162
Query: 115 ELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGV 174
EL+A DLHG +WRF H +RG P+RHLLTTGW+ F TSK+LVAGD VF+RGE GEL VG+
Sbjct: 163 ELLATDLHGNQWRFNHNYRGTPQRHLLTTGWNAFTTSKKLVAGDVIVFVRGETGELRVGI 222
Query: 175 RCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKP--RTSQFIISLNKYLE 232
R QQ ++PSS+IS +SM GV+A+A HA Q MF+V YKP R+SQFI+S +K+L+
Sbjct: 223 RRAGHQQGNIPSSIISIESMRHGVIASAKHAFDNQCMFIVVYKPSIRSSQFIVSYDKFLD 282
Query: 233 AVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITR 292
AVNNKF VG R+ MRFEG+D ERR+ GT++GV DFSPHWK S+WR+L+VQWDE AS +R
Sbjct: 283 AVNNKFNVGSRFTMRFEGDDFSERRYFGTIIGVSDFSPHWKCSEWRNLEVQWDEFASFSR 342
Query: 293 PDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNL 352
P++VSPWEIE + + N+ +P L KNKR R E+ S++S L Q +
Sbjct: 343 PNKVSPWEIEHLMPAL--NVPRPSLLKNKRLREVNEI-----GSSSSHLLPPILTQGQEI 395
Query: 353 TQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDD 412
QLSV + +S T D ++ ++
Sbjct: 396 GQLSVASPMN---------------------ISLTYRDTT--------------EDVMNP 420
Query: 413 NKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSE 472
++ + ++P P P N+ ++ Q+E T+TGT+ RLFG+ L+ + P E
Sbjct: 421 SRLLMSYPVQ-----PMPKLNYNNQMVTQIEENITTKTGTNFRLFGVSLVTPSVIKDPIE 475
Query: 473 KVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRS 532
++ G IS ++ E K+ Q Q SP E QSKQ +S R+
Sbjct: 476 EI--------GSEISKLT-------------EGKKFGQSQTLRSPTEIQSKQ--FSSTRT 512
Query: 533 RTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLV 592
TKVQMQGV + RA+DL+ L GYD LI ELEE+FD+KGQL TR +WEI +TD + D MLV
Sbjct: 513 CTKVQMQGVTIERAVDLSVLNGYDQLILELEELFDLKGQLQTRNQWEIAFTDSDDDKMLV 572
Query: 593 GDDPWHEFCNMVKRIFI 609
GDDPW EFCNMVK+I I
Sbjct: 573 GDDPWPEFCNMVKKILI 589
>gi|5091627|gb|AAD39615.1|AC007454_14 Similar to gb|AF082176 auxin response factor 9 from Arabidopsis
thaliana [Arabidopsis thaliana]
Length = 619
Score = 506 bits (1303), Expect = e-140, Method: Compositional matrix adjust.
Identities = 285/612 (46%), Positives = 373/612 (60%), Gaps = 85/612 (13%)
Query: 4 LEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPE------PSQNE 57
+E ST +ELN+ P+ LPSK+ CRV+ IHL E +DE YA+ITL+P+ P+QNE
Sbjct: 83 VETSTREELNELQPICDLPSKLQCRVIAIHLKVENNSDETYAEITLMPDTTQVVIPTQNE 142
Query: 58 PTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELV 117
+ RP V+SF+KVLTASDTS HGGF V +KHA ECLP LDM+Q P QEL+
Sbjct: 143 ---------NQFRPLVNSFTKVLTASDTSAHGGFFVPKKHAIECLPSLDMSQPLPAQELL 193
Query: 118 AKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCL 177
A DLHG +WRF H +RG P+RHLLTTGW+ F TSK+LVAGD VF+RGE GEL VG+R
Sbjct: 194 AIDLHGNQWRFNHNYRGTPQRHLLTTGWNAFTTSKKLVAGDVIVFVRGETGELRVGIRRA 253
Query: 178 ARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNK 237
QQ ++PSS++S M GV+A+A HA Q MF V YKPR+S+FI+S +K+L+AVNNK
Sbjct: 254 RHQQGNIPSSIVSIDCMRHGVVASAKHAFDNQCMFTVVYKPRSSKFIVSYDKFLDAVNNK 313
Query: 238 FAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVS 297
F VG R+ MR EG+D ERR GT++GV DFSPHWK S+WRSL+VQWDE S P +VS
Sbjct: 314 FNVGSRFTMRLEGDDFSERRCFGTIIGVSDFSPHWKCSEWRSLEVQWDEFTSFPGPKKVS 373
Query: 298 PWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSV 357
PW+IE + + N+ + L KNKR R E+ S++S L Q QLSV
Sbjct: 374 PWDIEHLMPAI--NVPRSFLLKNKRLREVNEI-----GSSSSHLLPPILTQGQENEQLSV 426
Query: 358 TAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNIS 417
+S N R + E +A++ +K +
Sbjct: 427 --------------------ASPMNISLRYRDATE---------------DAMNPSKLLM 451
Query: 418 AWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVS 477
++P P P N+ ++ ++E T+TGT+ RLFG+ L + P K P+
Sbjct: 452 SYPVQ-----PMPKLNYNNQMVTEMEENITTKTGTNFRLFGVTL-----DTPPVIKDPIE 501
Query: 478 SLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQ 537
+ +E IS ++ E K+ Q SP E Q+KQ +S+R+ TKVQ
Sbjct: 502 EIGSE---ISKLT-------------EGKKFGLSQTLRSPTEIQNKQ--FSSSRTCTKVQ 543
Query: 538 MQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPW 597
MQGV +GRA+DL+ L GYD LI ELE++FDIKGQL TR +WEI +TD + D MLVGDDPW
Sbjct: 544 MQGVTIGRAVDLSVLNGYDQLILELEKLFDIKGQLQTRNQWEIAFTDSDEDKMLVGDDPW 603
Query: 598 HEFCNMVKRIFI 609
EFCNMVK+IFI
Sbjct: 604 PEFCNMVKKIFI 615
>gi|297851948|ref|XP_002893855.1| hypothetical protein ARALYDRAFT_473654 [Arabidopsis lyrata subsp.
lyrata]
gi|297339697|gb|EFH70114.1| hypothetical protein ARALYDRAFT_473654 [Arabidopsis lyrata subsp.
lyrata]
Length = 601
Score = 499 bits (1285), Expect = e-138, Method: Compositional matrix adjust.
Identities = 296/627 (47%), Positives = 385/627 (61%), Gaps = 89/627 (14%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPE------PS 54
+E +EAST ++LN+ P+ LPSK+ CRV+ I L E+ +DE YA+ITL+P P+
Sbjct: 55 IELVEASTGEKLNELQPIVDLPSKLQCRVITIQLKVERNSDETYAEITLMPYTTQVVIPT 114
Query: 55 QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQ 114
QNE + RP V+SF+KVLTASDTS HGGFSV RK A ECLPPLDM+Q P Q
Sbjct: 115 QNE---------NQFRPLVNSFTKVLTASDTSAHGGFSVPRKLAIECLPPLDMSQPLPAQ 165
Query: 115 ELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGV 174
EL+ DLHG +WRFKH +RG PRRHLLTTGW+ F+TSK+LVAGD VFLRGE GEL VG+
Sbjct: 166 ELLTIDLHGNQWRFKHSYRGTPRRHLLTTGWNAFITSKKLVAGDVIVFLRGETGELRVGI 225
Query: 175 RCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAV 234
R QQ ++PSS+IS +SM GV+A+A HA Q MF+V YKPR+SQFI++ +K+L+A+
Sbjct: 226 RRAGYQQGNIPSSIISIESMRHGVIASAKHAFDNQCMFIVVYKPRSSQFIVNYDKFLDAM 285
Query: 235 NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPD 294
NNKF VG R+ RFE +D ERR+ GT++GV DFSPHWK S+WRSLK DE AS RPD
Sbjct: 286 NNKFNVGSRFTKRFEEDDFSERRYFGTIIGVIDFSPHWKCSEWRSLK---DEFASFPRPD 342
Query: 295 RVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQ 354
+VSPWEIE ++ + N+++ + KNK R E+ S++S L Q + Q
Sbjct: 343 KVSPWEIE--YSTPSSNVLRLSMLKNKCSREFNEI-----GSSSSHLLPPILTQGQEIGQ 395
Query: 355 LSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSP-RVKFSQQLFQEAIDDN 413
S +TSP V S +++AI+DN
Sbjct: 396 PS-------------------------------------MTSPMNVPLS---YRDAIEDN 415
Query: 414 KNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTET-GTSCRLFGIELINHATSSAPSE 472
S T NND ++ + G T G SCR+FG+ L ++ P
Sbjct: 416 STPSRLLMSYSVQTMSRLNYNNDQMVTPIIEGNITNNGGASCRVFGVSL-----ATPPVI 470
Query: 473 KVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQV-SPKESQSKQSCLTSNR 531
K P+ + DS S+I+K +EKK Q+ SP+E QSKQ L+S R
Sbjct: 471 KDPIEQM--------------DSYPNSEISKLSQEKKFGLGQMRSPREIQSKQ--LSSTR 514
Query: 532 SRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMML 591
+ TKVQM GVA+GRALDL+ L GYD LI ELE++FD+KGQL R +WEI + D+E D ML
Sbjct: 515 TCTKVQMHGVALGRALDLSVLNGYDQLILELEKLFDLKGQLQNRNQWEIAFKDNEEDEML 574
Query: 592 VGDDPWHEFCNMVKRIFICSSQDVKKM 618
VGDDPW EFCNMVK+I I S+++VK
Sbjct: 575 VGDDPWPEFCNMVKKIIIYSNEEVKNF 601
>gi|8778254|gb|AAF79263.1|AC023279_12 F12K21.26 [Arabidopsis thaliana]
Length = 620
Score = 496 bits (1277), Expect = e-137, Method: Compositional matrix adjust.
Identities = 289/653 (44%), Positives = 384/653 (58%), Gaps = 118/653 (18%)
Query: 6 ASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE-PTTPDPC 64
AST +ELN+ P+ LPSK+ CRV+ IHL E +DE+YA+ITL+P+ +Q PT +
Sbjct: 34 ASTREELNELQPICDLPSKLQCRVIAIHLKVENNSDEIYAEITLMPDTTQVVIPTQSE-- 91
Query: 65 PADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGY 124
+ RP V+SF+KVLTASDTS +GGFSV +KHA ECLPPLDM+Q P QE++A DLH
Sbjct: 92 --NRFRPLVNSFTKVLTASDTSAYGGFSVPKKHAIECLPPLDMSQPLPAQEILAIDLHDN 149
Query: 125 EWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSM 184
+WRF+H +RG P+RH LTTGW+ F+TSK+LV GD VF+RGE GEL VG+R QQ ++
Sbjct: 150 QWRFRHNYRGTPQRHSLTTGWNEFITSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNI 209
Query: 185 PSSVISSQSMHLGVLATASHAVATQTMFVVYYKP----------RTSQFIISLNKYLEAV 234
PSS++S M GV+A+A HA Q +F+V YKP R+SQFI+S +K+L+AV
Sbjct: 210 PSSIVSIDCMRHGVIASAKHAFDNQCIFIVVYKPRFIFCVFISIRSSQFIVSYDKFLDAV 269
Query: 235 NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPD 294
NNKF VG R+ MRFEG+D ERR+ GT++GV DFSPHWK S+WRSL+VQWDE AS +RP+
Sbjct: 270 NNKFNVGSRFTMRFEGDDFSERRYFGTIIGVSDFSPHWKCSEWRSLEVQWDEFASFSRPN 329
Query: 295 RVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQ 354
+VSPWEIE V + N+ + L KNKR R EV + S++S L Q + Q
Sbjct: 330 KVSPWEIEHLVPAL--NVPRSSLLKNKRLR---EVN--EFGSSSSHLLPPILTQGQEIGQ 382
Query: 355 LSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNK 414
LSV +S N R + E A++ ++
Sbjct: 383 LSV--------------------ASPMNISLRYRDTTE---------------AAMNPSR 407
Query: 415 NISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKV 474
+ ++P P P N+ ++ Q+E T+ GT+ RLFG+ L + P K
Sbjct: 408 LLMSYPVQ-----PMPKLNYNNQMVTQIEENITTKAGTNFRLFGVTL-----DTPPMIKD 457
Query: 475 PVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKK--QEQVQVSPKESQSKQSCLTSNRS 532
P+ + SDI+K + KK Q Q SP E QSKQ +S+R+
Sbjct: 458 PIKQI------------------GSDISKLTERKKFGQSQTLRSPIEIQSKQ--FSSSRT 497
Query: 533 RTK-----------------------------VQMQGVAVGRALDLTTLVGYDHLIDELE 563
TK VQMQGV +GRA+DL+ L GYD LI ELE
Sbjct: 498 CTKVSIRSIYSYSLYMKLFLIVLNSHNLYMEQVQMQGVTIGRAVDLSVLNGYDQLILELE 557
Query: 564 EMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVK 616
++FDIKGQL TR +W+I +TD +G MLVGDDPW EFC MVK+I I S ++VK
Sbjct: 558 KLFDIKGQLQTRNQWKIAFTDSDGYEMLVGDDPWPEFCKMVKKILIYSKEEVK 610
>gi|297846440|ref|XP_002891101.1| hypothetical protein ARALYDRAFT_336503 [Arabidopsis lyrata subsp.
lyrata]
gi|297336943|gb|EFH67360.1| hypothetical protein ARALYDRAFT_336503 [Arabidopsis lyrata subsp.
lyrata]
Length = 578
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 282/612 (46%), Positives = 369/612 (60%), Gaps = 93/612 (15%)
Query: 28 RVVNIHLMAEQETDEVYAQITLLPE------PSQNEPTTPDPCPADSPRPKVHSFSKVLT 81
RV+ I L E+ +DE YA+ITL+P P+QNE + RP V+SF+KVLT
Sbjct: 39 RVIAIQLKVERNSDETYAEITLMPNTTQVVIPTQNE---------NQFRPLVNSFTKVLT 89
Query: 82 ASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL 141
ASDTS HGGFSV RK A ECLPPLDM+Q P QEL+ DLHG +WRFKH +RG PRRHLL
Sbjct: 90 ASDTSAHGGFSVPRKLAIECLPPLDMSQPLPAQELLTIDLHGNQWRFKHSYRGTPRRHLL 149
Query: 142 TTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLAT 201
TTGW+ F+TSK+LVAGD VFLRGE GEL V +R QQ ++PSS+IS +SM GV+A+
Sbjct: 150 TTGWNAFITSKKLVAGDVIVFLRGETGELRVSIRRARYQQGNIPSSLISIESMRHGVIAS 209
Query: 202 ASHAVATQTMFVVYYKP----------RTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGE 251
A HA Q MF+V YKP R+SQFI++ +K+L+AVNNKF VG R+ MRFE E
Sbjct: 210 AKHAFDNQCMFIVVYKPRFIFCVCISIRSSQFIVNYDKFLDAVNNKFNVGSRFTMRFEEE 269
Query: 252 DSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPN 311
+ ERR+ GT++GV DFSPHWK S+WRSLKVQWDE AS RPD+VSPWEI+ ++ + N
Sbjct: 270 NFSERRYFGTIIGVSDFSPHWKCSEWRSLKVQWDEFASFPRPDKVSPWEIKH--STPSSN 327
Query: 312 LVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWH 371
++ + KNKR R E+ S++S L Q + Q S+T+ ++ +++
Sbjct: 328 VLPSSMLKNKRSREFNEI-----GSSSSHLLPPILTQGQEIGQPSMTSP---MNVPLSYR 379
Query: 372 HKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPS 431
D S+ S + T PR+ +
Sbjct: 380 DAIEDDSTPSRLLMSYSVQ----TMPRLNY------------------------------ 405
Query: 432 KPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISA 491
NND ++ +E G SCR+FG+ L ++ P K P+ +
Sbjct: 406 --NNDQIVTPIEGNITNNGGASCRVFGVSL-----ATPPVIKDPIEQI------------ 446
Query: 492 AADSDGKSDIAKEFKEKKQEQVQV-SPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLT 550
DSD +I+K +EK Q+ S +E QSKQ L+S R+ TKVQM GV +GRALDL+
Sbjct: 447 --DSDPNLEISKLSQEKIFGLGQMRSTREIQSKQ--LSSTRTCTKVQMHGVTLGRALDLS 502
Query: 551 TLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFIC 610
L GYD LI ELE++FD+KGQL R +WEIV+TD+E D MLVGDDPW EFCNMVK+I I
Sbjct: 503 VLNGYDQLILELEKLFDLKGQLQNRNQWEIVFTDNEEDEMLVGDDPWPEFCNMVKKIIIY 562
Query: 611 SSQDVKKMSPGS 622
S ++VK G+
Sbjct: 563 SKEEVKNFKSGN 574
>gi|79357149|ref|NP_174758.2| auxin response factor 20 [Arabidopsis thaliana]
gi|206729928|sp|Q9C7I9.3|ARFT_ARATH RecName: Full=Auxin response factor 20
gi|49616365|gb|AAT67079.1| ARF20 [Arabidopsis thaliana]
gi|332193650|gb|AEE31771.1| auxin response factor 20 [Arabidopsis thaliana]
Length = 590
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 277/621 (44%), Positives = 375/621 (60%), Gaps = 99/621 (15%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE-PT 59
+E ++AST +ELN+ P+ LPSK+ CRV+ IHL E +DE YA+ITL+P+ +Q PT
Sbjct: 54 IELVDASTREELNELQPICDLPSKLQCRVIAIHLKVENNSDETYAEITLMPDTTQVVIPT 113
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
+ + RP V+SF+KVLTASDTS +GGF V +KHA ECLPPL + P QEL+AK
Sbjct: 114 QSE----NQFRPLVNSFTKVLTASDTSAYGGFFVPKKHAIECLPPLPL----PAQELLAK 165
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLHG +WRF+H +RG P+RH LTTGW+ F TSK+LV GD VF+RGE GEL VG+R
Sbjct: 166 DLHGNQWRFRHSYRGTPQRHSLTTGWNEFTTSKKLVKGDVIVFVRGETGELRVGIRRARH 225
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKP--RTSQFIISLNKYLEAVNNK 237
QQ ++PSS++S M GV+A+A HA+ Q +F+V YKP R+SQFI+S +K+L+A+NNK
Sbjct: 226 QQGNIPSSIVSIDCMRHGVIASAKHALDNQCIFIVVYKPSIRSSQFIVSYDKFLDAMNNK 285
Query: 238 FAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVS 297
F VG R+ MRFEG+D ERR+ GT++GV DFSPHWK S+WRSL+VQWDE AS +RP++VS
Sbjct: 286 FIVGSRFTMRFEGDDFSERRYFGTIIGVNDFSPHWKCSEWRSLEVQWDEFASFSRPNKVS 345
Query: 298 PWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSV 357
PWEIE +++ N+ + L KNKR R E + QLSV
Sbjct: 346 PWEIEHLMSAL--NVPRSSLLKNKRLREVNEF-------------------GQEIGQLSV 384
Query: 358 TAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNIS 417
+ N++ R + ++A++ ++ +
Sbjct: 385 AS------------------PMNTSLRYRDTT-----------------EDAMNPSRLLM 409
Query: 418 AWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVS 477
++P P P N+ ++ Q+E T+ T+ RLFG+ L P E++
Sbjct: 410 SYPVQ-----PMPKLNYNNQMVTQIEENITTKAVTNFRLFGVSLAIPLVIKDPIEEI--- 461
Query: 478 SLTTEGHIISTISAAADSDGKSDIAK--EFKEKKQEQVQVSPKESQSKQSCLTSNRSRTK 535
SDI+K E K+ Q Q SP E QSKQ S R+ TK
Sbjct: 462 --------------------GSDISKLTEGKKFGQSQTLRSPIEIQSKQ--FGSTRTCTK 499
Query: 536 VQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDD 595
VQMQGV +GRA+DL+ L GYD LI ELE++FD+KGQL TR +W+I +TD +G MLVGDD
Sbjct: 500 VQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQTRNQWKIAFTDSDGYEMLVGDD 559
Query: 596 PWHEFCNMVKRIFICSSQDVK 616
PW EFC MVK+I I S ++VK
Sbjct: 560 PWPEFCKMVKKILIYSKEEVK 580
>gi|8778363|gb|AAF79371.1|AC007887_30 F15O4.37 [Arabidopsis thaliana]
Length = 767
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 273/620 (44%), Positives = 373/620 (60%), Gaps = 82/620 (13%)
Query: 4 LEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDP 63
+EAST +ELN+ P+ PSK+ CRV+ I L E +DE YA+ITL+P+ +Q T +
Sbjct: 113 VEASTREELNELQPICDFPSKLQCRVIAIQLKVENNSDETYAEITLMPDTTQVVIPTQN- 171
Query: 64 CPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHG 123
+ RP V+SF+KVLTASDTS HGGFSV +KHA ECLPPLDM+Q PTQE++A DLHG
Sbjct: 172 --QNQFRPLVNSFTKVLTASDTSVHGGFSVPKKHAIECLPPLDMSQPLPTQEILAIDLHG 229
Query: 124 YEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSS 183
+WRF+HI+RG +RHLLT GW+ F TSK+LV GD VF+RGE GEL VG+R QQ +
Sbjct: 230 NQWRFRHIYRGTAQRHLLTIGWNAFTTSKKLVEGDVIVFVRGETGELRVGIRRAGHQQGN 289
Query: 184 MPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMR 243
+PSS++S +SM G++A+A HA Q MF+V YKPR+SQFI+S +K+L+ VNNKF VG R
Sbjct: 290 IPSSIVSIESMRHGIIASAKHAFDNQCMFIVVYKPRSSQFIVSYDKFLDVVNNKFNVGSR 349
Query: 244 YKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEP 303
+ MRFEG+D ERR GT++GV DFSPHWK S+WRSL+VQWDE AS RP++VSPW+IE
Sbjct: 350 FTMRFEGDDFSERRSFGTIIGVSDFSPHWKCSEWRSLEVQWDEFASFPRPNQVSPWDIEH 409
Query: 304 FVASATP--NLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAED 361
TP N+ + KNKR R E+ S++S L Q + Q S+
Sbjct: 410 L----TPWSNVSRSSFLKNKRSREVNEI-----GSSSSHLLPPTLTQGQEIGQQSM---- 456
Query: 362 KRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPA 421
++ N R + + ++A+ ++ + ++P
Sbjct: 457 ----------------ATPMNISLRYRD---------------ITEDAMTPSRLLMSYPV 485
Query: 422 HSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTT 481
+K N + ++ +E T S RLFG+ L + P E++ +
Sbjct: 486 QPM------AKLNYNNVVTPIEENITTNAVASFRLFGVSLATPSVIKDPVEQIGL----- 534
Query: 482 EGHIISTISAAADSDGKSDIAKEFKEKK--QEQVQVSPKESQSKQSCLTSNRSRTKVQMQ 539
+I++ +EKK Q Q+ SP E QSKQ +S R+ TKVQMQ
Sbjct: 535 ------------------EISRLTQEKKFGQSQILRSPTEIQSKQ--FSSTRTCTKVQMQ 574
Query: 540 GVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHE 599
GV +GRA+DL+ L GYD LI ELE++FD+KGQL R +WEI +T++E D MLVG+DPW E
Sbjct: 575 GVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQARNQWEIAFTNNEEDKMLVGEDPWPE 634
Query: 600 FCNMVKRIFICSSQDVKKMS 619
FCNM + S D K++
Sbjct: 635 FCNMRGYVASNSKDDPAKVA 654
>gi|42569975|ref|NP_182176.2| auxin response factor 11 [Arabidopsis thaliana]
gi|110739686|dbj|BAF01750.1| ARF1 family auxin responsive transcription factor like protein
[Arabidopsis thaliana]
gi|330255620|gb|AEC10714.1| auxin response factor 11 [Arabidopsis thaliana]
Length = 601
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 238/331 (71%), Positives = 274/331 (82%), Gaps = 3/331 (0%)
Query: 1 MEQLEASTNQEL-NQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPT 59
MEQL ASTNQ + +Q IP+F LP KILCRV+++ L AE ETDEVYAQITL PE Q+EPT
Sbjct: 48 MEQLVASTNQGVVDQEIPVFNLPPKILCRVLSVTLKAEHETDEVYAQITLQPEEDQSEPT 107
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
+ DP + +P V SF K+LTASDTSTHGGFSVLRKHATECLP LDM Q TPTQELVA+
Sbjct: 108 SLDPPLVEPAKPTVDSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVAR 167
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGD FVFLRGE G+L VGVR LA+
Sbjct: 168 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAK 227
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFA 239
QQS+MP+SVISSQSM LGVLATASHAV T T+FVV+YKPR SQFIIS+NKY+ A+ N F+
Sbjct: 228 QQSTMPASVISSQSMRLGVLATASHAVTTTTIFVVFYKPRISQFIISVNKYMMAMKNGFS 287
Query: 240 VGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPW 299
+GMRY+MRFEGE+SPER F+GT++G D S W SKWRSL++QWDEP+SI RP++VSPW
Sbjct: 288 LGMRYRMRFEGEESPERIFTGTIIGSGDLSSQWPASKWRSLQIQWDEPSSIQRPNKVSPW 347
Query: 300 EIEPFVASA-TPNLVQPVLAKNKRPRLSMEV 329
EIEPF SA TP Q +K+KR R E+
Sbjct: 348 EIEPFSPSALTPTPTQQ-QSKSKRSRPISEI 377
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 84/174 (48%), Positives = 107/174 (61%), Gaps = 24/174 (13%)
Query: 452 TSCRLFGIELINH-ATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 510
+SCRLFG +L + A+++ P +K +IS S +DS K +
Sbjct: 433 SSCRLFGFDLTSKPASATIPHDK----------QLISVDSNISDSTTKC---------QD 473
Query: 511 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 570
SPKE + + TS RSR KVQMQG AVGRA+DLT L YD LI ELE+MF+I+G
Sbjct: 474 PNSSNSPKEQKQQ----TSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEG 529
Query: 571 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 624
+L + KW IV+TDDEGD MLVGDDPW+EFC M K++FI S +VKKM S L
Sbjct: 530 ELSPKDKWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEVKKMRSKSLL 583
>gi|110739362|dbj|BAF01593.1| ARF1 family auxin responsive transcription factor like protein
[Arabidopsis thaliana]
Length = 601
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 238/331 (71%), Positives = 274/331 (82%), Gaps = 3/331 (0%)
Query: 1 MEQLEASTNQEL-NQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPT 59
MEQL ASTNQ + +Q IP+F LP KILCRV+++ L AE ETDEVYAQITL PE Q+EPT
Sbjct: 48 MEQLVASTNQGVVDQEIPVFNLPPKILCRVLSVTLKAEHETDEVYAQITLQPEEDQSEPT 107
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
+ DP + +P V SF K+LTASDTSTHGGFSVLRKHATECLP LDM Q TPTQELVA+
Sbjct: 108 SLDPPLVEPAKPAVDSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVAR 167
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGD FVFLRGE G+L VGVR LA+
Sbjct: 168 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAK 227
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFA 239
QQS+MP+SVISSQSM LGVLATASHAV T T+FVV+YKPR SQFIIS+NKY+ A+ N F+
Sbjct: 228 QQSTMPASVISSQSMRLGVLATASHAVTTTTIFVVFYKPRISQFIISVNKYMMAMKNGFS 287
Query: 240 VGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPW 299
+GMRY+MRFEGE+SPER F+GT++G D S W SKWRSL++QWDEP+SI RP++VSPW
Sbjct: 288 LGMRYRMRFEGEESPERIFTGTIIGSGDLSSQWPASKWRSLQIQWDEPSSIQRPNKVSPW 347
Query: 300 EIEPFVASA-TPNLVQPVLAKNKRPRLSMEV 329
EIEPF SA TP Q +K+KR R E+
Sbjct: 348 EIEPFSPSALTPTPTQQ-QSKSKRSRPISEI 377
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/174 (48%), Positives = 106/174 (60%), Gaps = 24/174 (13%)
Query: 452 TSCRLFGIELINH-ATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 510
+SCRLFG +L + A+++ P +K +IS S +DS K
Sbjct: 433 SSCRLFGFDLTSKPASATIPHDK----------QLISVDSNISDSTTKC---------HD 473
Query: 511 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 570
SPKE + + TS RSR KVQMQG AVGRA+DLT L YD LI ELE+MF+I+G
Sbjct: 474 PNSSNSPKEQKQQ----TSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEG 529
Query: 571 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 624
+L + KW IV+TDDEGD MLVGDDPW+EFC M K++FI S +VKKM S L
Sbjct: 530 ELSPKDKWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEVKKMRSKSLL 583
>gi|79324927|ref|NP_001031548.1| auxin response factor 11 [Arabidopsis thaliana]
gi|238054388|sp|Q9ZPY6.3|ARFK_ARATH RecName: Full=Auxin response factor 11
gi|4415934|gb|AAD20164.1| putative ARF1 family auxin responsive transcription factor
[Arabidopsis thaliana]
gi|20197827|gb|AAM15267.1| putative ARF1 family auxin responsive transcription factor
[Arabidopsis thaliana]
gi|49616357|gb|AAT67075.1| ARF11 [Arabidopsis thaliana]
gi|330255622|gb|AEC10716.1| auxin response factor 11 [Arabidopsis thaliana]
Length = 622
Score = 486 bits (1252), Expect = e-134, Method: Compositional matrix adjust.
Identities = 238/331 (71%), Positives = 274/331 (82%), Gaps = 3/331 (0%)
Query: 1 MEQLEASTNQEL-NQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPT 59
MEQL ASTNQ + +Q IP+F LP KILCRV+++ L AE ETDEVYAQITL PE Q+EPT
Sbjct: 69 MEQLVASTNQGVVDQEIPVFNLPPKILCRVLSVTLKAEHETDEVYAQITLQPEEDQSEPT 128
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
+ DP + +P V SF K+LTASDTSTHGGFSVLRKHATECLP LDM Q TPTQELVA+
Sbjct: 129 SLDPPLVEPAKPTVDSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVAR 188
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGD FVFLRGE G+L VGVR LA+
Sbjct: 189 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAK 248
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFA 239
QQS+MP+SVISSQSM LGVLATASHAV T T+FVV+YKPR SQFIIS+NKY+ A+ N F+
Sbjct: 249 QQSTMPASVISSQSMRLGVLATASHAVTTTTIFVVFYKPRISQFIISVNKYMMAMKNGFS 308
Query: 240 VGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPW 299
+GMRY+MRFEGE+SPER F+GT++G D S W SKWRSL++QWDEP+SI RP++VSPW
Sbjct: 309 LGMRYRMRFEGEESPERIFTGTIIGSGDLSSQWPASKWRSLQIQWDEPSSIQRPNKVSPW 368
Query: 300 EIEPFVASA-TPNLVQPVLAKNKRPRLSMEV 329
EIEPF SA TP Q +K+KR R E+
Sbjct: 369 EIEPFSPSALTPTPTQQ-QSKSKRSRPISEI 398
Score = 148 bits (374), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 84/174 (48%), Positives = 107/174 (61%), Gaps = 24/174 (13%)
Query: 452 TSCRLFGIELINH-ATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 510
+SCRLFG +L + A+++ P +K +IS S +DS K +
Sbjct: 454 SSCRLFGFDLTSKPASATIPHDK----------QLISVDSNISDSTTKC---------QD 494
Query: 511 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 570
SPKE + + TS RSR KVQMQG AVGRA+DLT L YD LI ELE+MF+I+G
Sbjct: 495 PNSSNSPKEQKQQ----TSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEG 550
Query: 571 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 624
+L + KW IV+TDDEGD MLVGDDPW+EFC M K++FI S +VKKM S L
Sbjct: 551 ELSPKDKWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEVKKMRSKSLL 604
>gi|297846686|ref|XP_002891224.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297337066|gb|EFH67483.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 629
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 275/616 (44%), Positives = 361/616 (58%), Gaps = 103/616 (16%)
Query: 28 RVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTST 87
RV+ I L E+ +DE YA+ITL+P +Q + + RP V+SF+KVLTASDTS
Sbjct: 82 RVIAIQLKVEKNSDETYAEITLMPYTTQVVIHNQN---DNHYRPSVNSFTKVLTASDTSA 138
Query: 88 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 147
HGGFSV RKHA ECLPPL+M++ P QEL+ DL G +WRFKH +RG P RHL+TTGW+
Sbjct: 139 HGGFSVPRKHAIECLPPLNMSEPLPAQELLTTDLQGNQWRFKHSYRGTPPRHLITTGWNA 198
Query: 148 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 207
F TSK+LVAGD VFLRGE GEL VG+R QQ + PSS+IS SM GV+A+A HA
Sbjct: 199 FTTSKKLVAGDVIVFLRGECGELRVGIRRAGHQQGNRPSSLISIDSMGHGVIASAVHAFD 258
Query: 208 TQTMFVVYYKP--RTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 265
Q MF+V KP R+SQFI+S +K+L+AVN KF VG R+ MRFEG+D ERR+SGT++GV
Sbjct: 259 NQCMFIVVCKPSIRSSQFIVSYDKFLDAVNKKFNVGSRFTMRFEGDDLSERRYSGTIIGV 318
Query: 266 EDFSPHWKDSKWRS-------------LKVQWDEPASITRPDRVSPWEIEPFVASATPNL 312
+DFSPHW +S+WRS L+V+WDE AS RPD+VSPWEIE + N+
Sbjct: 319 KDFSPHWIESEWRSLEVKFSFTLYNIILRVKWDEFASFPRPDKVSPWEIEHL--TPLSNV 376
Query: 313 VQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHH 372
++ L KNKR R E+
Sbjct: 377 LRSSLLKNKRSREVNEIG------------------------------------------ 394
Query: 373 KHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQL---FQEAIDDNKNISAWPAHSGHSTPH 429
S++S+ + + + + P + + + +++A +D + P+ S P
Sbjct: 395 -----STSSHLLPPISTQDQEIGQPSMIYPMNVLPSYRDATED----AEIPSRLLISYPV 445
Query: 430 PSKP----NNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSE-KVPVSSLTTEGH 484
P+ P NN+ ++ +E T SCRLFG+ L + PSE K P+
Sbjct: 446 PTMPKLTYNNNQMVTPLEKNITTNASASCRLFGVSL------ATPSEIKDPIDQ------ 493
Query: 485 IISTISAAADSDGKSDIAKEFKEKK--QEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVA 542
DS S+I+K +EKK Q S +E QSKQ L+S RS TKVQM+GV
Sbjct: 494 --------QDSYQISEISKLSQEKKFGLGQTLTSAREIQSKQ--LSSTRSCTKVQMEGVT 543
Query: 543 VGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCN 602
VGRALDL+ L GYD LI ELE++FD+ GQL TR +WEI + D+EGD M VGDDPW EFCN
Sbjct: 544 VGRALDLSVLNGYDQLILELEKLFDLNGQLQTRNQWEISFIDNEGDKMFVGDDPWPEFCN 603
Query: 603 MVKRIFICSSQDVKKM 618
MVKRI I + + VK +
Sbjct: 604 MVKRIIIYTKEKVKNL 619
>gi|6850874|emb|CAB71113.1| auxin response factor-like protein [Arabidopsis thaliana]
Length = 613
Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust.
Identities = 225/320 (70%), Positives = 264/320 (82%), Gaps = 12/320 (3%)
Query: 1 MEQLEASTNQELN-QRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPT 59
MEQL ASTNQ +N + IP+F LP KILCRV+++ L AE ETDEVYAQITL PE Q+EPT
Sbjct: 52 MEQLVASTNQGINSEEIPVFDLPPKILCRVLDVTLKAEHETDEVYAQITLQPEEDQSEPT 111
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
+ DP + + HSF K+LTASDTSTHGGFSVLRKHATECLP LDM Q+TPTQELV +
Sbjct: 112 SLDPPIVGPTKQEFHSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQATPTQELVTR 171
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLHG+EWRFKHIFRGQPRRHLLTTGWSTFV+SKRLVAGD FVFLRGENG+L VGVR LAR
Sbjct: 172 DLHGFEWRFKHIFRGQPRRHLLTTGWSTFVSSKRLVAGDAFVFLRGENGDLRVGVRRLAR 231
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFA 239
QS+MP+SVISSQSMHLGVLATASHAV T T+FVV+YKPR SQFI+ +NKY+EA+ + F+
Sbjct: 232 HQSTMPTSVISSQSMHLGVLATASHAVRTTTIFVVFYKPRISQFIVGVNKYMEAIKHGFS 291
Query: 240 VGMRYKMRFEGEDSPER-----------RFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPA 288
+G R++MRFEGE+SPER RF+GT+VG D S W SKWRSL+VQWDEP
Sbjct: 292 LGTRFRMRFEGEESPERIVLDSETWNVFRFTGTIVGSGDLSSQWPASKWRSLQVQWDEPT 351
Query: 289 SITRPDRVSPWEIEPFVASA 308
++ RPD+VSPWEIEPF+A++
Sbjct: 352 TVQRPDKVSPWEIEPFLATS 371
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/184 (48%), Positives = 113/184 (61%), Gaps = 29/184 (15%)
Query: 450 TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKK 509
T S RLFG +L +++ + P +K P + T AA K
Sbjct: 447 TNCSYRLFGFDLTSNSPAPIPQDKQP----------MDTCGAA---------------KC 481
Query: 510 QEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK 569
QE + + Q KQ ++RSRTKVQMQG+AVGRA+DLT L YD LIDELEEMF+I+
Sbjct: 482 QEPITPTSMSEQKKQQ---TSRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQ 538
Query: 570 GQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSI 629
GQL R KW +V+TDDEGDMML GDDPW+EFC M K+IFI SS +VKKM+ K+ S+
Sbjct: 539 GQLLARDKWIVVFTDDEGDMMLAGDDPWNEFCKMAKKIFIYSSDEVKKMTTKLKISS-SL 597
Query: 630 EGED 633
E E+
Sbjct: 598 ENEE 601
>gi|297817514|ref|XP_002876640.1| hypothetical protein ARALYDRAFT_349241 [Arabidopsis lyrata subsp.
lyrata]
gi|297322478|gb|EFH52899.1| hypothetical protein ARALYDRAFT_349241 [Arabidopsis lyrata subsp.
lyrata]
Length = 608
Score = 473 bits (1217), Expect = e-130, Method: Compositional matrix adjust.
Identities = 230/338 (68%), Positives = 269/338 (79%), Gaps = 15/338 (4%)
Query: 1 MEQLEASTNQEL-NQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPT 59
MEQL ASTNQ + ++ IP+F LP KILCRV+ I L AE ETDEVYAQITL PE Q+EPT
Sbjct: 52 MEQLVASTNQGIKSEEIPVFDLPPKILCRVLGITLKAEHETDEVYAQITLQPEEDQSEPT 111
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
+ DP + + HSF K+LTASDTSTHGGFSVLRKHATECLP LDM Q+TPTQELV +
Sbjct: 112 SLDPPLVEPTKQMFHSFVKILTASDTSTHGGFSVLRKHATECLPALDMTQATPTQELVTR 171
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLHG+EWRFKHIFRGQPRRHLLTTGWSTFV+SKRLVAGD FVFLRGENG+L VGVR LAR
Sbjct: 172 DLHGFEWRFKHIFRGQPRRHLLTTGWSTFVSSKRLVAGDAFVFLRGENGDLRVGVRRLAR 231
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFA 239
QS+MP+SVISSQSMHLGVLATASHAV T T+FVV+YKPR SQFI+ +NKY+EA+ + F+
Sbjct: 232 HQSTMPTSVISSQSMHLGVLATASHAVRTTTIFVVFYKPRISQFIVGVNKYMEAIKHGFS 291
Query: 240 VGMRYKMRFEGEDSPER-----------RFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPA 288
+G R++MRFEGE+SPER RF+GT+VG D S W SKWRSL+VQWDEP
Sbjct: 292 LGTRFRMRFEGEESPERIVLDSETWSVFRFTGTIVGTGDLSSQWPASKWRSLQVQWDEPT 351
Query: 289 SITRPDRVSPWEIEPFVAS---ATPNLVQPVLAKNKRP 323
++ RPD+VSPWEIEPF+A+ +TP + K RP
Sbjct: 352 TVQRPDKVSPWEIEPFLATSPISTPAQQPQLKCKRSRP 389
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/181 (48%), Positives = 111/181 (61%), Gaps = 29/181 (16%)
Query: 453 SCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQ 512
S RLFG +L ++ + P +K P + T AA K QE
Sbjct: 453 SYRLFGFDLTSNPPAPLPQDKQP----------MDTCGAA---------------KCQEP 487
Query: 513 VQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL 572
+ + Q KQ ++RSRTKVQMQG+AVGRA+DLT L YD LI+ELEEMF+I+GQL
Sbjct: 488 ITPTSMNEQKKQQ---TSRSRTKVQMQGIAVGRAVDLTLLKSYDELIEELEEMFEIQGQL 544
Query: 573 HTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGE 632
R KW +V+TDDEGDMML GDDPW+EFC M K+IFI SS +VKKM+ K+ S+E E
Sbjct: 545 RPRDKWIVVFTDDEGDMMLAGDDPWNEFCKMAKKIFIYSSDEVKKMATKLKISS-SLENE 603
Query: 633 D 633
+
Sbjct: 604 E 604
>gi|379323232|gb|AFD01315.1| auxin response factor 18-1 [Brassica rapa subsp. pekinensis]
Length = 1055
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 220/309 (71%), Positives = 264/309 (85%), Gaps = 1/309 (0%)
Query: 1 MEQLEASTNQEL-NQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPT 59
MEQL ASTNQ + +++IP F+LP KILC+V+++ L AE +TDEVYAQITL PE Q+EPT
Sbjct: 51 MEQLVASTNQGIESEKIPDFKLPPKILCQVLSVMLKAEHDTDEVYAQITLKPEEDQSEPT 110
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
+ DP + + HSF K+LTASDTSTHGGFSVLRKHATECLP LDM Q+ PTQELV +
Sbjct: 111 SLDPPIVEPTKQMFHSFVKILTASDTSTHGGFSVLRKHATECLPALDMTQAIPTQELVTR 170
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLHG+EWRFKHIFRGQPRRHLLTTGWSTFV+SKRLVAGD FVFLRGENG+L VGVR LAR
Sbjct: 171 DLHGFEWRFKHIFRGQPRRHLLTTGWSTFVSSKRLVAGDAFVFLRGENGDLRVGVRRLAR 230
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFA 239
Q++MP+SVISSQSMHLGVLATASHAV TQTMF+V+YKPR SQFI+S+NKY+EA+ + F+
Sbjct: 231 HQNTMPASVISSQSMHLGVLATASHAVNTQTMFLVFYKPRISQFIVSVNKYMEAMKHGFS 290
Query: 240 VGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPW 299
+G R++MRFEGE+SPER F+GT+VG+ D S W S WRSL+VQWDEP ++ RPD+VSPW
Sbjct: 291 LGTRFRMRFEGEESPERIFTGTIVGIGDLSSQWPASTWRSLQVQWDEPTTVQRPDKVSPW 350
Query: 300 EIEPFVASA 308
EIEPF+ S+
Sbjct: 351 EIEPFLPSS 359
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 102/174 (58%), Gaps = 29/174 (16%)
Query: 442 VETGRKTETGTSC-RLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSD 500
V+ +SC RLFG +L ++ + P +K P+ + S AA
Sbjct: 393 VQAEPPPPPASSCYRLFGFDLTSNPPAPIPPDKQPMDT-----------SEAA------- 434
Query: 501 IAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLID 560
K Q+ + S KQ ++R+RTKVQMQG+AVGRA+DLT L YD LI
Sbjct: 435 -------KCQDPITPSSVNEPKKQQ---TSRTRTKVQMQGIAVGRAVDLTLLKSYDELIK 484
Query: 561 ELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 614
ELEEMF+I+GQL R KW +V+TDDEGDMML GDDPW+EFC M K+IFI SS +
Sbjct: 485 ELEEMFEIQGQLLPRDKWIVVFTDDEGDMMLAGDDPWNEFCKMAKKIFIYSSDE 538
>gi|379323234|gb|AFD01316.1| auxin response factor 18-2 [Brassica rapa subsp. pekinensis]
Length = 555
Score = 470 bits (1210), Expect = e-129, Method: Compositional matrix adjust.
Identities = 220/308 (71%), Positives = 261/308 (84%), Gaps = 1/308 (0%)
Query: 1 MEQLEASTNQEL-NQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPT 59
MEQL ASTNQ + ++ IP F+LP KILCRV+++ L AE +TDEVYAQITL PE Q+E T
Sbjct: 51 MEQLVASTNQGIESEEIPDFKLPPKILCRVLSVMLKAEHDTDEVYAQITLKPEEDQSELT 110
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
+ DP + + HSF K+LTASDTSTHGGFSVLRKHATECLP LDM Q+TPTQELV +
Sbjct: 111 SLDPPLVEPTKQMFHSFVKILTASDTSTHGGFSVLRKHATECLPALDMGQATPTQELVTR 170
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLHG+EWRFKHIFRGQPRRHLLTTGWSTFV+SKRLVAGD FVFLRGENG+L VGVR LAR
Sbjct: 171 DLHGFEWRFKHIFRGQPRRHLLTTGWSTFVSSKRLVAGDAFVFLRGENGDLRVGVRRLAR 230
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFA 239
QS+MP+SVISSQSMHLGVLATASHAV T+T+F+V+YKPR SQFI+ +NKY+EA+ + F+
Sbjct: 231 HQSTMPTSVISSQSMHLGVLATASHAVVTKTIFLVFYKPRISQFIVGVNKYMEAMKHGFS 290
Query: 240 VGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPW 299
+G R++MRFEGE+SPER F+GT+VG+ D S W S WRSL+VQWDEP + RPDRVSPW
Sbjct: 291 LGTRFRMRFEGEESPERMFTGTIVGIGDLSSQWPASTWRSLQVQWDEPTTFQRPDRVSPW 350
Query: 300 EIEPFVAS 307
EIEPF++S
Sbjct: 351 EIEPFLSS 358
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/113 (62%), Positives = 83/113 (73%), Gaps = 3/113 (2%)
Query: 507 EKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF 566
+K QE + S KQ R+RTKV MQGVAVGRA+DLT L Y+ LI ELEEMF
Sbjct: 430 DKCQEPITPSAANEPKKQQ---KQRTRTKVIMQGVAVGRAVDLTLLKSYNELIKELEEMF 486
Query: 567 DIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
+IKGQL TR KW +V+TDDEGDMML GDDPW+EFC M K+IFI SS +VKKM+
Sbjct: 487 EIKGQLLTREKWVVVFTDDEGDMMLAGDDPWNEFCKMAKKIFIYSSDEVKKMT 539
>gi|312283167|dbj|BAJ34449.1| unnamed protein product [Thellungiella halophila]
Length = 559
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 230/326 (70%), Positives = 266/326 (81%), Gaps = 3/326 (0%)
Query: 1 MEQLEASTNQEL-NQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPT 59
MEQL A TNQ + +Q IP F LP KILCRV+++ L AE ETDEVYAQITL PE Q+EPT
Sbjct: 48 MEQLVALTNQGVVDQEIPDFNLPPKILCRVLSVMLKAEHETDEVYAQITLQPEEDQSEPT 107
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
+ DP + + V SF K+LTASDTSTHGGFSVLRKHATECLP LDM Q T TQELVA+
Sbjct: 108 SLDPPLVEPAKQSVDSFVKILTASDTSTHGGFSVLRKHATECLPSLDMRQPTQTQELVAR 167
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGD FVFLRG+ G+L VGVR LAR
Sbjct: 168 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGQTGDLRVGVRRLAR 227
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFA 239
QQS+MP+SVISSQSMHLGVLATASHAV T+T+FVV+YKPR SQFII +NKY+ A+ F
Sbjct: 228 QQSTMPASVISSQSMHLGVLATASHAVNTKTLFVVFYKPRISQFIIGVNKYMAAMKIGFP 287
Query: 240 VGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPW 299
+GMR++MRFEGE+SPER F+GT+VG D S W SKWRSL++QWDEP+++ RP++VS W
Sbjct: 288 IGMRFRMRFEGEESPERIFTGTIVGTGDLSSQWPASKWRSLQIQWDEPSTVQRPNKVSTW 347
Query: 300 EIEPFVASA-TPNLVQPVLAKNKRPR 324
EIEPF S TP QP +K+KR R
Sbjct: 348 EIEPFSPSVLTPTPTQP-QSKSKRSR 372
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 87/149 (58%), Gaps = 27/149 (18%)
Query: 446 RKTET--GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAK 503
+KTET + CRLFG +L++ S+AP VP L +IS S + S K
Sbjct: 436 KKTETPVTSCCRLFGFDLMSKPASTAP---VPPDKL-----LISVDSNNSGS-AKCQDPN 486
Query: 504 EFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELE 563
E+KQ+ TS RSRTKVQ QG AVGRA+DLT L YD LI+ELE
Sbjct: 487 SLTEQKQQ----------------TSTRSRTKVQKQGTAVGRAVDLTLLRSYDELINELE 530
Query: 564 EMFDIKGQLHTRTKWEIVYTDDEGDMMLV 592
+MF+I G+L + KW IV+TDDEGDMMLV
Sbjct: 531 KMFEIDGELSPKDKWAIVFTDDEGDMMLV 559
>gi|148840309|sp|Q9FX25.3|ARFM_ARATH RecName: Full=Auxin response factor 13
Length = 621
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 263/628 (41%), Positives = 364/628 (57%), Gaps = 82/628 (13%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
+E +E ST EL+ P+F LPSK+ CRVV I ++ TDEVYAQI+L+P+ ++
Sbjct: 52 IELIENSTRDELDHIRPIFDLPSKLRCRVVAIDRKVDKNTDEVYAQISLMPDTTE---VM 108
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
D+ RP V+ FSK+LTASD S GG + +++A EC PPLDM+Q TQ LVAKD
Sbjct: 109 THNTTMDTRRPIVYFFSKILTASDVSLSGGLIIPKQYAIECFPPLDMSQPISTQNLVAKD 168
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTG--WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
L+G EW FKH+FRG P+RH+ T+G WS F T+KRL+ GD FV LRGENGEL G+R
Sbjct: 169 LYGQEWSFKHVFRGTPQRHMFTSGGGWSVFATTKRLIVGDIFVLLRGENGELRFGIRRAK 228
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKF 238
QQ +PSSVIS+ M GV+A+ +A T+ MF V YKP +SQF+IS +K+++A+NN +
Sbjct: 229 HQQGHIPSSVISANCMQHGVIASVVNAFKTKCMFNVVYKPSSSQFVISYDKFVDAMNNNY 288
Query: 239 AVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSP 298
VG R++M+FEG+D E+R+ GT++GV D SPHWKDS+WRSLKVQWDE + RP++VS
Sbjct: 289 IVGSRFRMQFEGKDFSEKRYDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVS- 347
Query: 299 WEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSAR-LAQSHNLTQLSV 357
PW L S +++Q S+
Sbjct: 348 ------------------------------------------PWDIEHLIPSSDISQSSL 365
Query: 358 TAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNIS 417
+ W + ++ SN + + + SP + + + AI+D+K +S
Sbjct: 366 KKKKH-------WLQLNEIGATLSNLWTCQEIGQRSMNSP-ISVPEFSYPNAIEDSKFLS 417
Query: 418 AWPA-HSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPV 476
HS + P+ + N+D +++ + TE TSC LFG++L S + P+
Sbjct: 418 GLLLNHSLLAIPNENY-NSDQMIQPRKEDITTEATTSCLLFGVDLTK--VSKSKDSICPI 474
Query: 477 SSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKV 536
S + D K D Q Q SPKE QS + T RSR KV
Sbjct: 475 ESC----------KKSLPQDKKFD---------QTQPLRSPKEVQSTEFNFT--RSRIKV 513
Query: 537 QMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDP 596
MQGVA+ RA+DLT + GY+ LI +LEE+FD+K +L TR +WEIV+T++EG MLVGDDP
Sbjct: 514 HMQGVAISRAVDLTAMHGYNQLIQKLEELFDLKDELRTRNQWEIVFTNNEGAEMLVGDDP 573
Query: 597 WHEFCNMVKRIFICSSQDVKKMSPGSKL 624
W EFCNM KRIFICS +++KKM +K
Sbjct: 574 WPEFCNMAKRIFICSKEEIKKMKLKNKF 601
>gi|407971008|ref|NP_001233765.1| auxin response factor 2 [Solanum lycopersicum]
gi|85069279|gb|ABC69711.1| auxin response factor 2 [Solanum lycopersicum]
Length = 846
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 224/336 (66%), Positives = 269/336 (80%), Gaps = 16/336 (4%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE--- 57
+EQ+EASTNQ +Q++PL+ LPSKILCRVVN+ L AE +TDEVYAQ+TL+PEP+Q+E
Sbjct: 70 IEQVEASTNQVADQQMPLYNLPSKILCRVVNVLLKAEPDTDEVYAQVTLMPEPNQDENAV 129
Query: 58 ---PTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQ 114
P P P PR VHSF K LTASDTSTHGGFSVLR+HA ECLP LDM++ PTQ
Sbjct: 130 KKEPMRPPP-----PRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPQLDMSRQPPTQ 184
Query: 115 ELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGV 174
ELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV+SKRLVAGD F+FLRGENGEL VGV
Sbjct: 185 ELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGV 244
Query: 175 RCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLE 232
R RQQ + PSSVISS SMHLGVLATA HA+ T+TMF VYYKPRTS +FI+ + Y+E
Sbjct: 245 RRAMRQQGNAPSSVISSHSMHLGVLATAWHAIQTKTMFTVYYKPRTSPAEFIVPYDHYME 304
Query: 233 AVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASIT 291
+V N +++GMR+KMRFEGE++PE+RF+GT+VG+ED P W +SKWR LKV+WDE +SI
Sbjct: 305 SVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWLESKWRCLKVRWDENSSIP 364
Query: 292 RPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSM 327
RPDRVSPW+IEP A + P L P +A+ KRPR S+
Sbjct: 365 RPDRVSPWKIEP--ALSPPALNVPPVARPKRPRSSI 398
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/234 (36%), Positives = 131/234 (55%), Gaps = 28/234 (11%)
Query: 416 ISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSA-----P 470
+S + S HS KP ++++Q E + E + +LFGI L ++ + A
Sbjct: 598 VSPYMQLSSHSREMMHKP---SVVKQPEAVKPKEG--NYKLFGIPLTSNVCTDAVMMRKS 652
Query: 471 SEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFK----------EKKQEQVQVSPKES 520
S P S + H ++ A DSD +S+ +K K +K+ ++ ++
Sbjct: 653 SLIDPASDMNIGIHPHQSL--ATDSDQRSEQSKGSKVDDGVAANDHDKQFHTFHLAARDK 710
Query: 521 QSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WE 579
K +S RS TKV QG A+GR++DL YD LI EL+++FD G+L R+K W
Sbjct: 711 DGKGHS-SSTRSCTKVHKQGTALGRSVDLAKFNNYDELIAELDQLFDFNGELKARSKSWL 769
Query: 580 IVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGED 633
+VYTDDEGDMMLVGDDPW EFC MV++IFI + ++V++M+PG+ + +GED
Sbjct: 770 VVYTDDEGDMMLVGDDPWQEFCGMVRKIFIYTKEEVQRMNPGT----LNSKGED 819
>gi|414878885|tpg|DAA56016.1| TPA: hypothetical protein ZEAMMB73_705793 [Zea mays]
Length = 805
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 224/343 (65%), Positives = 271/343 (79%), Gaps = 12/343 (3%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE--P 58
+EQ+EAS NQ ++ L+ LP K+LCRV+N+ L AE +TDEVYAQI L+PEP Q +
Sbjct: 51 IEQVEASMNQVAGNQMRLYDLPPKLLCRVLNVELKAETDTDEVYAQIMLMPEPEQTDVPA 110
Query: 59 TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
P PA SPRP V SF K LTASDTSTHGGFSVLR+HA ECLPPLDM QS PTQELVA
Sbjct: 111 EKPSSAPAASPRPAVRSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVA 170
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
KDLHG EWRF+HIFRGQPRRHLL +GWS FV+SKRLVAGD F+FLRGENGEL VGVR
Sbjct: 171 KDLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAM 230
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNN 236
RQ S++PSSVISSQSMHLGVLATA HA+ T++MF VYYKPRT S+FII ++Y+E+V N
Sbjct: 231 RQLSNVPSSVISSQSMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKN 290
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRV 296
+++GMR++MRFEGE++PE+RF+GT+VG E+ P W DS WR LKV+WDEP++I RPDRV
Sbjct: 291 NYSIGMRFRMRFEGEEAPEQRFTGTIVGCENLDPLWPDSSWRYLKVRWDEPSTIPRPDRV 350
Query: 297 SPWEIEPFVASATPNLVQPVL--AKNKRPRLSMEVPPLDLPSA 337
SPW+IEP AS+ P V P++ ++ KRPR VPP L S+
Sbjct: 351 SPWKIEP--ASSPP--VNPLVHSSRAKRPR--QNVPPPSLESS 387
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 116/192 (60%), Gaps = 19/192 (9%)
Query: 447 KTETGTSCRLFGIELINHATSSAPSE-KVPVSSLTTEGHIISTISAAADSD--------- 496
KT G+ ++FG ++ TS +P + P+ ++ + H++ T +A ++
Sbjct: 600 KTREGSGFKIFGFQV--DTTSPSPVQLSSPLPAI--QEHVLQTRPSAPVNELQPVQIECL 655
Query: 497 --GKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVG 554
G A E Q+ Q S K+ QSK S S RS TKV QGVA+GR++DL+
Sbjct: 656 PEGSVSTAGTATENIQQAPQSS-KDIQSK-SQGASTRSCTKVHKQGVALGRSVDLSKFTD 713
Query: 555 YDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQ 613
Y L EL++MFD +G+L + ++ W+IVYTDDEGDMMLVGDDPW EFC++V++I+I + +
Sbjct: 714 YGELQAELDKMFDFEGELVSGSQNWQIVYTDDEGDMMLVGDDPWEEFCSIVRKIYIYTKE 773
Query: 614 DVKKMSPGSKLP 625
+V+KM+ S P
Sbjct: 774 EVQKMNSKSAAP 785
>gi|295844294|gb|ADG43144.1| auxin response factor 10 [Zea mays]
Length = 799
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 224/343 (65%), Positives = 271/343 (79%), Gaps = 12/343 (3%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE--P 58
+EQ+EAS NQ ++ L+ LP K+LCRV+N+ L AE +TDEVYAQI L+PEP Q +
Sbjct: 45 IEQVEASMNQVAGNQMRLYDLPPKLLCRVLNVELKAETDTDEVYAQIMLMPEPEQTDVPA 104
Query: 59 TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
P PA SPRP V SF K LTASDTSTHGGFSVLR+HA ECLPPLDM QS PTQELVA
Sbjct: 105 EKPSSAPAASPRPAVRSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVA 164
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
KDLHG EWRF+HIFRGQPRRHLL +GWS FV+SKRLVAGD F+FLRGENGEL VGVR
Sbjct: 165 KDLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAM 224
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNN 236
RQ S++PSSVISSQSMHLGVLATA HA+ T++MF VYYKPRT S+FII ++Y+E+V N
Sbjct: 225 RQLSNVPSSVISSQSMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKN 284
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRV 296
+++GMR++MRFEGE++PE+RF+GT+VG E+ P W DS WR LKV+WDEP++I RPDRV
Sbjct: 285 NYSIGMRFRMRFEGEEAPEQRFTGTIVGCENLDPLWPDSSWRYLKVRWDEPSTIPRPDRV 344
Query: 297 SPWEIEPFVASATPNLVQPVL--AKNKRPRLSMEVPPLDLPSA 337
SPW+IEP AS+ P V P++ ++ KRPR VPP L S+
Sbjct: 345 SPWKIEP--ASSPP--VNPLVHSSRAKRPR--QNVPPPSLESS 381
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 116/192 (60%), Gaps = 19/192 (9%)
Query: 447 KTETGTSCRLFGIELINHATSSAPSE-KVPVSSLTTEGHIISTISAAADSD--------- 496
KT G+ ++FG ++ TS +P + P+ ++ + H++ T +A ++
Sbjct: 594 KTREGSGFKIFGFQV--DTTSPSPVQLSSPLPAI--QEHVLQTRPSAPVNELQPVQIECL 649
Query: 497 --GKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVG 554
G A E Q+ Q S K+ QSK S S RS TKV QGVA+GR++DL+
Sbjct: 650 PEGSVSTAGTATENIQQAPQSS-KDIQSK-SQGASTRSCTKVHKQGVALGRSVDLSKFTD 707
Query: 555 YDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQ 613
Y L EL++MFD +G+L + ++ W+IVYTDDEGDMMLVGDDPW EFC++V++I+I + +
Sbjct: 708 YGELQAELDKMFDFEGELVSGSQNWQIVYTDDEGDMMLVGDDPWEEFCSIVRKIYIYTKE 767
Query: 614 DVKKMSPGSKLP 625
+V+KM+ S P
Sbjct: 768 EVQKMNSKSAAP 779
>gi|414878884|tpg|DAA56015.1| TPA: hypothetical protein ZEAMMB73_705793 [Zea mays]
Length = 822
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 224/343 (65%), Positives = 271/343 (79%), Gaps = 12/343 (3%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE--P 58
+EQ+EAS NQ ++ L+ LP K+LCRV+N+ L AE +TDEVYAQI L+PEP Q +
Sbjct: 51 IEQVEASMNQVAGNQMRLYDLPPKLLCRVLNVELKAETDTDEVYAQIMLMPEPEQTDVPA 110
Query: 59 TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
P PA SPRP V SF K LTASDTSTHGGFSVLR+HA ECLPPLDM QS PTQELVA
Sbjct: 111 EKPSSAPAASPRPAVRSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVA 170
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
KDLHG EWRF+HIFRGQPRRHLL +GWS FV+SKRLVAGD F+FLRGENGEL VGVR
Sbjct: 171 KDLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAM 230
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNN 236
RQ S++PSSVISSQSMHLGVLATA HA+ T++MF VYYKPRT S+FII ++Y+E+V N
Sbjct: 231 RQLSNVPSSVISSQSMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKN 290
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRV 296
+++GMR++MRFEGE++PE+RF+GT+VG E+ P W DS WR LKV+WDEP++I RPDRV
Sbjct: 291 NYSIGMRFRMRFEGEEAPEQRFTGTIVGCENLDPLWPDSSWRYLKVRWDEPSTIPRPDRV 350
Query: 297 SPWEIEPFVASATPNLVQPVL--AKNKRPRLSMEVPPLDLPSA 337
SPW+IEP AS+ P V P++ ++ KRPR VPP L S+
Sbjct: 351 SPWKIEP--ASSPP--VNPLVHSSRAKRPR--QNVPPPSLESS 387
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 95/164 (57%), Gaps = 19/164 (11%)
Query: 447 KTETGTSCRLFGIELINHATSSAPSE-KVPVSSLTTEGHIISTISAAADSD--------- 496
KT G+ ++FG ++ TS +P + P+ ++ + H++ T +A ++
Sbjct: 600 KTREGSGFKIFGFQV--DTTSPSPVQLSSPLPAI--QEHVLQTRPSAPVNELQPVQIECL 655
Query: 497 --GKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVG 554
G A E Q+ Q S K+ QSK S S RS TKV QGVA+GR++DL+
Sbjct: 656 PEGSVSTAGTATENIQQAPQSS-KDIQSK-SQGASTRSCTKVHKQGVALGRSVDLSKFTD 713
Query: 555 YDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPW 597
Y L EL++MFD +G+L + ++ W+IVYTDDEGDMMLVGDDPW
Sbjct: 714 YGELQAELDKMFDFEGELVSGSQNWQIVYTDDEGDMMLVGDDPW 757
>gi|308080234|ref|NP_001183800.1| hypothetical protein [Zea mays]
gi|238014618|gb|ACR38344.1| unknown [Zea mays]
gi|407232702|gb|AFT82693.1| ARF14 ARF type transcription factor, partial [Zea mays subsp. mays]
gi|413922703|gb|AFW62635.1| hypothetical protein ZEAMMB73_114282 [Zea mays]
Length = 511
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 223/330 (67%), Positives = 268/330 (81%), Gaps = 8/330 (2%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
MEQLEAST+Q+L+Q +PLF LP KILC+VVN+ L AE ++DEVYAQI L PE Q+EPT+
Sbjct: 47 MEQLEASTDQQLDQHLPLFDLPPKILCKVVNVELRAETDSDEVYAQIMLQPEADQSEPTS 106
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
PD P + R V+SF K LTASDTSTHGGFSVLR+HA ECLP LDM Q+ P QEL+AKD
Sbjct: 107 PDSEPPEPERCNVYSFCKTLTASDTSTHGGFSVLRRHAEECLPQLDMTQNPPWQELLAKD 166
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
LHG EW F+HIFRGQPRRHLLTTGWS FV+SKRLVAGD F+FLRGENGEL VGVR L RQ
Sbjct: 167 LHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRLMRQ 226
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKF 238
++MPSSVISS +MHLGVLATASHA++T T+F V+YKPRT S+F++S+NKYLEA N+K
Sbjct: 227 LNNMPSSVISSHNMHLGVLATASHAISTGTLFSVFYKPRTSRSEFVVSVNKYLEAKNHKV 286
Query: 239 AVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPH----WKDSKWRSLKVQWDEPASITRPD 294
+VGMR+KMRFEG++SPERR SGT++G+ + W +S WRSL+VQWDEP++I RPD
Sbjct: 287 SVGMRFKMRFEGDESPERRLSGTIIGLGSMPANSTSPWANSDWRSLRVQWDEPSAILRPD 346
Query: 295 RVSPWEIEPFVASATPNLVQPVLAKNKRPR 324
RVSPWE+EP A+ P QP L +NKR R
Sbjct: 347 RVSPWELEPLDAT-NPQPPQPHL-RNKRAR 374
>gi|73697834|gb|AAZ81521.1| auxin response factor 1 [Gossypium barbadense]
Length = 673
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 222/327 (67%), Positives = 267/327 (81%), Gaps = 4/327 (1%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
MEQLEAS +Q L ++P F LPSKILC+V ++ AE +TDEVYAQITL+PE Q+E +
Sbjct: 49 MEQLEASMHQGLEHQMPSFDLPSKILCKVASVQRKAEPDTDEVYAQITLVPEVDQSEVMS 108
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
PD + R VHSF K LTASDTSTHGGFSVLR+HA +CLPPLDM Q P QEL+A D
Sbjct: 109 PDDPLQEPERCIVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELIATD 168
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
LHG EW F+HIFRGQPRRHLLTTGWS FV+SK+LVAGD F+FLRG NG+L VGVR L RQ
Sbjct: 169 LHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGANGDLRVGVRRLMRQ 228
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKF 238
Q++MPSSVISS SMHLGVLATAS+A++T++MF ++YKPRT S+FI+S+NKYLEA ++K
Sbjct: 229 QANMPSSVISSHSMHLGVLATASYALSTRSMFSIFYKPRTSLSEFIVSVNKYLEARSHKL 288
Query: 239 AVGMRYKMRFEGEDSPERRFSGTVVGVE-DFSPHWKDSKWRSLKVQWDEPASITRPDRVS 297
+VGMR+KMRFEGE+ PERRFSGT+VGVE D S W DS+WRSLKVQWDEP+SI RPDRVS
Sbjct: 289 SVGMRFKMRFEGEEVPERRFSGTIVGVEADKSSGWADSEWRSLKVQWDEPSSIIRPDRVS 348
Query: 298 PWEIEPFVASATPNLVQPVLAKNKRPR 324
PWE+EP VA++ ++ QP +NKR R
Sbjct: 349 PWELEPLVATSNSSISQPA-QRNKRAR 374
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 92/189 (48%), Positives = 126/189 (66%), Gaps = 16/189 (8%)
Query: 446 RKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTI-SAAADSDGKSDIAKE 504
RK TG CRLFGI+LI++ E P+++++ G + S A+SD +SD +
Sbjct: 462 RKQGTGNGCRLFGIQLIDNINME---ENSPLATISGTGVNDQPLHSLDANSDQQSDPSNL 518
Query: 505 FKEK------KQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHL 558
+ + E+ SP+ESQSKQ RS TKV MQG+AVGRA+DLT Y+ L
Sbjct: 519 NQSDLPSISCEPEKCLRSPQESQSKQI-----RSCTKVHMQGMAVGRAVDLTRFDCYEDL 573
Query: 559 IDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKK 617
+ +LE MFDIKGQL TK W++VYTDDE DMM+VGDDPW+EFC+MV++IFI +S++V+K
Sbjct: 574 LKKLEYMFDIKGQLCGSTKNWQVVYTDDEDDMMMVGDDPWNEFCSMVRKIFIYTSEEVRK 633
Query: 618 MSPGSKLPM 626
+SP KLP+
Sbjct: 634 LSPKIKLPV 642
>gi|295844286|gb|ADG43140.1| auxin response factor 6 [Zea mays]
gi|414587106|tpg|DAA37677.1| TPA: hypothetical protein ZEAMMB73_822305 [Zea mays]
Length = 657
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 224/331 (67%), Positives = 263/331 (79%), Gaps = 9/331 (2%)
Query: 1 MEQLEASTN-QELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPT 59
MEQLEAS + Q+L+Q +P+F LP KILCRVVN+ L AE ++DEVYAQI L PE QNE T
Sbjct: 49 MEQLEASAHHQQLDQYLPMFDLPPKILCRVVNVELRAEADSDEVYAQIMLQPEADQNELT 108
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
+ D P + + HSF K LTASDTSTHGGFSVLR+HA ECLP LDM+Q+ P QELVAK
Sbjct: 109 SLDAEPQEREKCTAHSFCKTLTASDTSTHGGFSVLRRHAEECLPQLDMSQNPPCQELVAK 168
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLHG EW F+HIFRGQP+RHLLTTGWS FV+SKRLV+GD F+F+RGENGEL VGVR L R
Sbjct: 169 DLHGTEWHFRHIFRGQPKRHLLTTGWSVFVSSKRLVSGDAFIFMRGENGELRVGVRRLMR 228
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNK 237
Q +SMPSSVISS SMHLGVLATASHA++T T+F V+YKPRTS+ FI+S+NKYLEA K
Sbjct: 229 QVNSMPSSVISSHSMHLGVLATASHAISTGTLFSVFYKPRTSRSDFIVSVNKYLEAKKQK 288
Query: 238 FAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPH----WKDSKWRSLKVQWDEPASITRP 293
+VGMR+KMRFEG+D+PERRFSGT++G+ W DS WRSLKVQWDEP+SI RP
Sbjct: 289 ISVGMRFKMRFEGDDAPERRFSGTIIGIGSLPAMSKSLWADSDWRSLKVQWDEPSSILRP 348
Query: 294 DRVSPWEIEPFVASATPNLVQPVLAKNKRPR 324
DR+SPWE+EP A A P QP L + KRPR
Sbjct: 349 DRISPWEVEPLDA-ANPQSPQPPL-RAKRPR 377
>gi|32479677|emb|CAE02512.1| P0076O17.10 [Oryza sativa Japonica Group]
Length = 1673
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 228/344 (66%), Positives = 270/344 (78%), Gaps = 16/344 (4%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
MEQLEASTNQ+L+Q +P+F LPSKILC VVN+ L AE ++DEVYAQI L PE Q+E T+
Sbjct: 47 MEQLEASTNQQLDQYLPMFNLPSKILCSVVNVELRAEADSDEVYAQIMLQPEADQSELTS 106
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
DP D + HSF K LTASDTSTHGGFSVLR+HA ECLP LDM+Q+ P QELVAKD
Sbjct: 107 LDPELQDLEKCTAHSFCKTLTASDTSTHGGFSVLRRHAEECLPQLDMSQNPPCQELVAKD 166
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
LHG EW F+HIFRGQPRRHLLTTGWS FV+SKRLVAGD F+FLRGE+GEL VGVR L RQ
Sbjct: 167 LHGTEWHFRHIFRGQPRRHLLTTGWSVFVSSKRLVAGDAFIFLRGESGELRVGVRRLMRQ 226
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKF 238
++MPSSVISS SMHLGVLATASHA++T T+F V+YKPRT S+F++S+NKYLEA
Sbjct: 227 VNNMPSSVISSHSMHLGVLATASHAISTGTLFSVFYKPRTSRSEFVVSVNKYLEAKKQNL 286
Query: 239 AVGMRYKMRFEGEDSPERRFSGTVVGVEDF-----SPHWKDSKWRSLKVQWDEPASITRP 293
+VGMR+KMRFEG+++PERRFSGT++G+ SP W DS W+SLKVQWDEP++I RP
Sbjct: 287 SVGMRFKMRFEGDEAPERRFSGTIIGIGSVPAMSKSP-WADSDWKSLKVQWDEPSAIVRP 345
Query: 294 DRVSPWEIEPFVASATPNLVQPVLAKNKR------PRLSMEVPP 331
DRVSPWE+EP AS P QP L +NKR P + E+PP
Sbjct: 346 DRVSPWELEPLDAS-NPQPPQPPL-RNKRARPPASPSVVAELPP 387
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/86 (63%), Positives = 64/86 (74%), Gaps = 6/86 (6%)
Query: 516 SPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH-T 574
SP ESQS+Q RS TKV MQG+AVGRA+DLT L GY L +LEEMFDI+G L T
Sbjct: 415 SPLESQSRQV-----RSCTKVIMQGMAVGRAVDLTKLNGYGDLRSKLEEMFDIQGDLCPT 469
Query: 575 RTKWEIVYTDDEGDMMLVGDDPWHEF 600
+W++VYTDDE DMMLVGDDPW +F
Sbjct: 470 LKRWQVVYTDDEDDMMLVGDDPWEKF 495
>gi|62319853|dbj|BAD93891.1| ARF1-binding protein [Arabidopsis thaliana]
gi|62319857|dbj|BAD93897.1| ARF1-binding protein [Arabidopsis thaliana]
gi|62319897|dbj|BAD93959.1| ARF1-binding protein [Arabidopsis thaliana]
Length = 859
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 220/332 (66%), Positives = 268/332 (80%), Gaps = 14/332 (4%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPT- 59
+EQ+EASTNQ Q++PL+ LPSK+LCRV+N+ L AE +TDEVYAQITLLPE +Q+E
Sbjct: 88 IEQVEASTNQAAEQQMPLYDLPSKLLCRVINVDLKAEADTDEVYAQITLLPEANQDENAI 147
Query: 60 ---TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQEL 116
P P P PR +VHSF K LTASDTSTHGGFSVLR+HA ECLPPLDM++ PTQEL
Sbjct: 148 EKEAPLPPP---PRFQVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQEL 204
Query: 117 VAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRC 176
VAKDLH EWRF+HIFRGQPRRHLL +GWS FV+SKRLVAGD F+FLRGENGEL VGVR
Sbjct: 205 VAKDLHANEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRR 264
Query: 177 LARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV 234
RQQ ++PSSVISS SMHLGVLATA HA++T TMF VYYKPRT S+FI+ ++Y+E+V
Sbjct: 265 AMRQQGNVPSSVISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESV 324
Query: 235 NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRP 293
N +++GMR+KMRFEGE++PE+RF+GT+VG+E+ P W SKWRSLKV+WDE +SI RP
Sbjct: 325 KNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRP 384
Query: 294 DRVSPWEIEPFVASATPNLVQPV-LAKNKRPR 324
DRVSPW++EP +A P + PV + + KRPR
Sbjct: 385 DRVSPWKVEPALA---PPALSPVPMPRPKRPR 413
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 114/188 (60%), Gaps = 11/188 (5%)
Query: 441 QVETGRKTETGTSCRLFGIELINH--ATSSAPSEKVPVSSLTTEGHIIS-TISAAADSDG 497
Q ET + E +CRLFGI L N+ T S S++ ++ I S + +D
Sbjct: 643 QEETAKSREG--NCRLFGIPLTNNMNGTDSTMSQRNNLNDAAGLTQIASPKVQDLSDQSK 700
Query: 498 KSDIAKEFKEKKQ--EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGY 555
S + +E+ + + PK++Q+K + S+RS TKV QG+A+GR++DL+ Y
Sbjct: 701 GSKSTNDHREQGRPFQTNNPHPKDAQTKTN---SSRSCTKVHKQGIALGRSVDLSKFQNY 757
Query: 556 DHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 614
+ L+ EL+ +F+ G+L K W IVYTD+E DMMLVGDDPW EFC MV++IFI + ++
Sbjct: 758 EELVAELDRLFEFNGELMAPKKDWLIVYTDEENDMMLVGDDPWQEFCCMVRKIFIYTKEE 817
Query: 615 VKKMSPGS 622
V+KM+PG+
Sbjct: 818 VRKMNPGT 825
>gi|62319903|dbj|BAD93968.1| ARF1-binding protein [Arabidopsis thaliana]
Length = 859
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 220/332 (66%), Positives = 268/332 (80%), Gaps = 14/332 (4%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPT- 59
+EQ+EASTNQ Q++PL+ LPSK+LCRV+N+ L AE +TDEVYAQITLLPE +Q+E
Sbjct: 88 IEQVEASTNQAAEQQMPLYDLPSKLLCRVINVDLKAEADTDEVYAQITLLPEANQDENAI 147
Query: 60 ---TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQEL 116
P P P PR +VHSF K LTASDTSTHGGFSVLR+HA ECLPPLDM++ PTQEL
Sbjct: 148 EKEAPLPPP---PRFQVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQEL 204
Query: 117 VAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRC 176
VAKDLH EWRF+HIFRGQPRRHLL +GWS FV+SKRLVAGD F+FLRGENGEL VGVR
Sbjct: 205 VAKDLHANEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRR 264
Query: 177 LARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV 234
RQQ ++PSSVISS SMHLGVLATA HA++T TMF VYYKPRT S+FI+ ++Y+E+V
Sbjct: 265 AMRQQGNVPSSVISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESV 324
Query: 235 NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRP 293
N +++GMR+KMRFEGE++PE+RF+GT+VG+E+ P W SKWRSLKV+WDE +SI RP
Sbjct: 325 KNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRP 384
Query: 294 DRVSPWEIEPFVASATPNLVQPV-LAKNKRPR 324
DRVSPW++EP +A P + PV + + KRPR
Sbjct: 385 DRVSPWKVEPALA---PPALSPVPMPRPKRPR 413
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 114/188 (60%), Gaps = 11/188 (5%)
Query: 441 QVETGRKTETGTSCRLFGIELINH--ATSSAPSEKVPVSSLTTEGHIIS-TISAAADSDG 497
Q ET + E +CRLFGI L N+ T S S++ ++ I S + +D
Sbjct: 643 QEETAKSREG--NCRLFGIPLTNNMNGTDSTMSQRNNLNDAAGLTQIASPKVQDLSDQSK 700
Query: 498 KSDIAKEFKEKKQ--EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGY 555
S + +E+ + + PK++Q+K + S+RS TKV QG+A+GR++DL+ Y
Sbjct: 701 GSKSTNDHREQGRPFQTNNPHPKDAQTKTN---SSRSCTKVHKQGIALGRSVDLSKFQNY 757
Query: 556 DHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 614
+ L+ EL+ +F+ G+L K W IVYTD+E DMMLVGDDPW EFC MV++IFI + ++
Sbjct: 758 EELVAELDRLFEFNGELMAPKKDWLIVYTDEENDMMLVGDDPWQEFCCMVRKIFIYTKEE 817
Query: 615 VKKMSPGS 622
V+KM+PG+
Sbjct: 818 VRKMNPGT 825
>gi|30697610|ref|NP_851244.1| auxin response factor 2 [Arabidopsis thaliana]
gi|30697612|ref|NP_201006.2| auxin response factor 2 [Arabidopsis thaliana]
gi|42573768|ref|NP_974980.1| auxin response factor 2 [Arabidopsis thaliana]
gi|46395940|sp|Q94JM3.2|ARFB_ARATH RecName: Full=Auxin response factor 2; AltName: Full=ARF1-binding
protein; Short=ARF1-BP; AltName: Full=Protein
MEGAINTEGUMENTA
gi|10176918|dbj|BAB10162.1| auxin response factor-like protein [Arabidopsis thaliana]
gi|23397283|gb|AAN31923.1| auxin response factor [Arabidopsis thaliana]
gi|49616349|gb|AAT67071.1| ARF2 [Arabidopsis thaliana]
gi|62319913|dbj|BAD93985.1| ARF1-binding protein [Arabidopsis thaliana]
gi|62319959|dbj|BAD94058.1| ARF1-binding protein [Arabidopsis thaliana]
gi|332010165|gb|AED97548.1| auxin response factor 2 [Arabidopsis thaliana]
gi|332010166|gb|AED97549.1| auxin response factor 2 [Arabidopsis thaliana]
gi|332010167|gb|AED97550.1| auxin response factor 2 [Arabidopsis thaliana]
Length = 859
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 220/332 (66%), Positives = 268/332 (80%), Gaps = 14/332 (4%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPT- 59
+EQ+EASTNQ Q++PL+ LPSK+LCRV+N+ L AE +TDEVYAQITLLPE +Q+E
Sbjct: 88 IEQVEASTNQAAEQQMPLYDLPSKLLCRVINVDLKAEADTDEVYAQITLLPEANQDENAI 147
Query: 60 ---TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQEL 116
P P P PR +VHSF K LTASDTSTHGGFSVLR+HA ECLPPLDM++ PTQEL
Sbjct: 148 EKEAPLPPP---PRFQVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQEL 204
Query: 117 VAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRC 176
VAKDLH EWRF+HIFRGQPRRHLL +GWS FV+SKRLVAGD F+FLRGENGEL VGVR
Sbjct: 205 VAKDLHANEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRR 264
Query: 177 LARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV 234
RQQ ++PSSVISS SMHLGVLATA HA++T TMF VYYKPRT S+FI+ ++Y+E+V
Sbjct: 265 AMRQQGNVPSSVISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESV 324
Query: 235 NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRP 293
N +++GMR+KMRFEGE++PE+RF+GT+VG+E+ P W SKWRSLKV+WDE +SI RP
Sbjct: 325 KNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRP 384
Query: 294 DRVSPWEIEPFVASATPNLVQPV-LAKNKRPR 324
DRVSPW++EP +A P + PV + + KRPR
Sbjct: 385 DRVSPWKVEPALA---PPALSPVPMPRPKRPR 413
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 114/188 (60%), Gaps = 11/188 (5%)
Query: 441 QVETGRKTETGTSCRLFGIELINH--ATSSAPSEKVPVSSLTTEGHIIS-TISAAADSDG 497
Q ET + E +CRLFGI L N+ T S S++ ++ I S + +D
Sbjct: 643 QEETAKSREG--NCRLFGIPLTNNMNGTDSTMSQRNNLNDAAGLTQIASPKVQDLSDQSK 700
Query: 498 KSDIAKEFKEKKQ--EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGY 555
S + +E+ + + PK++Q+K + S+RS TKV QG+A+GR++DL+ Y
Sbjct: 701 GSKSTNDHREQGRPFQTNNPHPKDAQTKTN---SSRSCTKVHKQGIALGRSVDLSKFQNY 757
Query: 556 DHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 614
+ L+ EL+ +F+ G+L K W IVYTD+E DMMLVGDDPW EFC MV++IFI + ++
Sbjct: 758 EELVAELDRLFEFNGELMAPKKDWLIVYTDEENDMMLVGDDPWQEFCCMVRKIFIYTKEE 817
Query: 615 VKKMSPGS 622
V+KM+PG+
Sbjct: 818 VRKMNPGT 825
>gi|19352039|dbj|BAB85913.1| auxin response factor 2 [Oryza sativa]
Length = 791
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 220/331 (66%), Positives = 269/331 (81%), Gaps = 12/331 (3%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE--- 57
+EQ+EAS NQ + ++ L+ LPSK+LCRV+N+ L AEQ+TDEVYAQ+ L+PEP QNE
Sbjct: 34 IEQVEASMNQVADSQMRLYDLPSKLLCRVLNVELKAEQDTDEVYAQVMLMPEPEQNEMAV 93
Query: 58 -PTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQEL 116
TTP P + RP V SF K LTASDTSTHGGFSVLR+HA ECLPPLDM QS PTQEL
Sbjct: 94 EKTTPTSGPVQA-RPPVRSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTQSPPTQEL 152
Query: 117 VAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRC 176
VAKDLH +WRF+HIFRGQPRRHLL +GWS FV+SKRLVAGD F+FLRGENGEL VGVR
Sbjct: 153 VAKDLHSMDWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRR 212
Query: 177 LARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV 234
RQ S++PSSVISSQSMHLGVLATA HA+ T++MF VYYKPRT S+FII ++Y+E+V
Sbjct: 213 AMRQLSNVPSSVISSQSMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESV 272
Query: 235 NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPD 294
N ++VGMR++MRFEGE++PE+RF+GT++G E+ P W +S WRSLKV+WDEP++I RPD
Sbjct: 273 KNNYSVGMRFRMRFEGEEAPEQRFTGTIIGSENLDPVWPESSWRSLKVRWDEPSTIPRPD 332
Query: 295 RVSPWEIEPFVASATPNLVQPV-LAKNKRPR 324
RVSPW+IEP AS+ P V P+ L++ KRPR
Sbjct: 333 RVSPWKIEP--ASSPP--VNPLPLSRVKRPR 359
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/120 (51%), Positives = 87/120 (72%), Gaps = 2/120 (1%)
Query: 507 EKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF 566
EK +Q Q S K+ QSK + + S RS TKV QGVA+GR++DL+ YD L EL++MF
Sbjct: 652 EKSGQQAQQSSKDVQSK-TQVASTRSCTKVHKQGVALGRSVDLSKFSNYDELKAELDKMF 710
Query: 567 DIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLP 625
+ G+L + K W+IVYTD+EGDMMLVGDDPW EFC++V++I+I + ++V+KM+ S P
Sbjct: 711 EFDGELVSSNKNWQIVYTDNEGDMMLVGDDPWEEFCSIVRKIYIYTKEEVQKMNSKSNAP 770
>gi|312282635|dbj|BAJ34183.1| unnamed protein product [Thellungiella halophila]
Length = 854
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 221/329 (67%), Positives = 268/329 (81%), Gaps = 8/329 (2%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
+EQ+EASTNQ Q++PL+ LPSK+LCRV+N+ L AE +TDEVYAQITLLPEP+Q+E
Sbjct: 88 IEQVEASTNQAAEQQMPLYDLPSKLLCRVINVDLKAEADTDEVYAQITLLPEPNQDENVI 147
Query: 61 -PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
+ P PR +VHSF K LTASDTSTHGGFSVLR+HA ECLPPLDM++ PTQELVAK
Sbjct: 148 EKETPPPPPPRFQVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAK 207
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH EWRF+HIFRGQPRRHLL +GWS FV+SKRLVAGD F+FLRGENGEL VGVR R
Sbjct: 208 DLHANEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 267
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNK 237
QQ ++PSSVISS SMHLGVLATA HA++T TMF VYYKPRTS +FI+ ++Y+E+V N
Sbjct: 268 QQGNVPSSVISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNN 327
Query: 238 FAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRV 296
+++GMR+KMRFEGE++PE+RF+GT+VG+ED P W SKWRSLKV+WDE +SI RPDRV
Sbjct: 328 YSIGMRFKMRFEGEEAPEQRFTGTIVGIEDSDPTRWAKSKWRSLKVRWDETSSIPRPDRV 387
Query: 297 SPWEIEPFVASATPNLVQPV-LAKNKRPR 324
SPW+IEP +A P + PV + + KRPR
Sbjct: 388 SPWKIEPALA---PPALSPVPMPRPKRPR 413
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 104/176 (59%), Gaps = 9/176 (5%)
Query: 453 SCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQ 512
+CRLFGI L+N+ + A S ++L + T A SD +K K ++
Sbjct: 648 NCRLFGIPLVNN-MNGADSTMAQRNNLKDAAGLTQT--APPKVQDLSDQSKGSKSTNDQR 704
Query: 513 VQVSPKES-----QSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD 567
Q P ++ + + S+RS TKV QG+A+GR++DL+ Y+ LI EL+ +F+
Sbjct: 705 EQGRPFQTNHPHPKDAHTKTNSSRSCTKVHKQGIALGRSVDLSKFQNYEELIAELDRLFE 764
Query: 568 IKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 622
G+L K W IVYTDDE DMM VGDDPW EFC MV++IFI + ++V+KM+PG+
Sbjct: 765 FNGELMAPKKDWLIVYTDDENDMMRVGDDPWQEFCCMVRKIFIYTKEEVRKMNPGT 820
>gi|218189656|gb|EEC72083.1| hypothetical protein OsI_05027 [Oryza sativa Indica Group]
Length = 803
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 220/331 (66%), Positives = 269/331 (81%), Gaps = 12/331 (3%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE--- 57
+EQ+EAS NQ + ++ L+ LPSK+LCRV+N+ L AEQ+TDEVYAQ+ L+PEP QNE
Sbjct: 46 IEQVEASMNQVADSQMRLYDLPSKLLCRVLNVELKAEQDTDEVYAQVMLMPEPEQNEMAV 105
Query: 58 -PTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQEL 116
TTP P + RP V SF K LTASDTSTHGGFSVLR+HA ECLPPLDM QS PTQEL
Sbjct: 106 EKTTPTSGPVQA-RPPVRSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTQSPPTQEL 164
Query: 117 VAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRC 176
VAKDLH +WRF+HIFRGQPRRHLL +GWS FV+SKRLVAGD F+FLRGENGEL VGVR
Sbjct: 165 VAKDLHSMDWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRR 224
Query: 177 LARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV 234
RQ S++PSSVISSQSMHLGVLATA HA+ T++MF VYYKPRT S+FII ++Y+E+V
Sbjct: 225 AMRQLSNVPSSVISSQSMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESV 284
Query: 235 NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPD 294
N ++VGMR++MRFEGE++PE+RF+GT++G E+ P W +S WRSLKV+WDEP++I RPD
Sbjct: 285 KNNYSVGMRFRMRFEGEEAPEQRFTGTIIGSENLDPVWPESSWRSLKVRWDEPSTIPRPD 344
Query: 295 RVSPWEIEPFVASATPNLVQPV-LAKNKRPR 324
RVSPW+IEP AS+ P V P+ L++ KRPR
Sbjct: 345 RVSPWKIEP--ASSPP--VNPLPLSRVKRPR 371
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/120 (51%), Positives = 87/120 (72%), Gaps = 2/120 (1%)
Query: 507 EKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF 566
EK +Q Q S K+ QSK + + S RS TKV QGVA+GR++DL+ YD L EL++MF
Sbjct: 664 EKSGQQAQQSSKDVQSK-TQVASTRSCTKVHKQGVALGRSVDLSKFSNYDELKAELDKMF 722
Query: 567 DIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLP 625
+ G+L + K W+IVYTD+EGDMMLVGDDPW EFC++V++I+I + ++V+KM+ S P
Sbjct: 723 EFDGELVSSNKNWQIVYTDNEGDMMLVGDDPWEEFCSIVRKIYIYTKEEVQKMNSKSNAP 782
>gi|334188562|ref|NP_001190591.1| auxin response factor 2 [Arabidopsis thaliana]
gi|332010168|gb|AED97551.1| auxin response factor 2 [Arabidopsis thaliana]
Length = 853
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 220/332 (66%), Positives = 268/332 (80%), Gaps = 14/332 (4%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPT- 59
+EQ+EASTNQ Q++PL+ LPSK+LCRV+N+ L AE +TDEVYAQITLLPE +Q+E
Sbjct: 88 IEQVEASTNQAAEQQMPLYDLPSKLLCRVINVDLKAEADTDEVYAQITLLPEANQDENAI 147
Query: 60 ---TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQEL 116
P P P PR +VHSF K LTASDTSTHGGFSVLR+HA ECLPPLDM++ PTQEL
Sbjct: 148 EKEAPLPPP---PRFQVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQEL 204
Query: 117 VAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRC 176
VAKDLH EWRF+HIFRGQPRRHLL +GWS FV+SKRLVAGD F+FLRGENGEL VGVR
Sbjct: 205 VAKDLHANEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRR 264
Query: 177 LARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV 234
RQQ ++PSSVISS SMHLGVLATA HA++T TMF VYYKPRT S+FI+ ++Y+E+V
Sbjct: 265 AMRQQGNVPSSVISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESV 324
Query: 235 NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRP 293
N +++GMR+KMRFEGE++PE+RF+GT+VG+E+ P W SKWRSLKV+WDE +SI RP
Sbjct: 325 KNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRP 384
Query: 294 DRVSPWEIEPFVASATPNLVQPV-LAKNKRPR 324
DRVSPW++EP +A P + PV + + KRPR
Sbjct: 385 DRVSPWKVEPALA---PPALSPVPMPRPKRPR 413
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 114/188 (60%), Gaps = 11/188 (5%)
Query: 441 QVETGRKTETGTSCRLFGIELINH--ATSSAPSEKVPVSSLTTEGHIIS-TISAAADSDG 497
Q ET + E +CRLFGI L N+ T S S++ ++ I S + +D
Sbjct: 643 QEETAKSREG--NCRLFGIPLTNNMNGTDSTMSQRNNLNDAAGLTQIASPKVQDLSDQSK 700
Query: 498 KSDIAKEFKEKKQ--EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGY 555
S + +E+ + + PK++Q+K + S+RS TKV QG+A+GR++DL+ Y
Sbjct: 701 GSKSTNDHREQGRPFQTNNPHPKDAQTKTN---SSRSCTKVHKQGIALGRSVDLSKFQNY 757
Query: 556 DHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 614
+ L+ EL+ +F+ G+L K W IVYTD+E DMMLVGDDPW EFC MV++IFI + ++
Sbjct: 758 EELVAELDRLFEFNGELMAPKKDWLIVYTDEENDMMLVGDDPWQEFCCMVRKIFIYTKEE 817
Query: 615 VKKMSPGS 622
V+KM+PG+
Sbjct: 818 VRKMNPGT 825
>gi|115441981|ref|NP_001045270.1| Os01g0927600 [Oryza sativa Japonica Group]
gi|75222728|sp|Q5JK20.1|ARFD_ORYSJ RecName: Full=Auxin response factor 4; AltName: Full=OsARF2
gi|57900138|dbj|BAD88200.1| putative auxin response factor [Oryza sativa Japonica Group]
gi|113534801|dbj|BAF07184.1| Os01g0927600 [Oryza sativa Japonica Group]
Length = 808
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 220/331 (66%), Positives = 269/331 (81%), Gaps = 12/331 (3%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE--- 57
+EQ+EAS NQ + ++ L+ LPSK+LCRV+N+ L AEQ+TDEVYAQ+ L+PEP QNE
Sbjct: 51 IEQVEASMNQVADSQMRLYDLPSKLLCRVLNVELKAEQDTDEVYAQVMLMPEPEQNEMAV 110
Query: 58 -PTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQEL 116
TTP P + RP V SF K LTASDTSTHGGFSVLR+HA ECLPPLDM QS PTQEL
Sbjct: 111 EKTTPTSGPVQA-RPPVRSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTQSPPTQEL 169
Query: 117 VAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRC 176
VAKDLH +WRF+HIFRGQPRRHLL +GWS FV+SKRLVAGD F+FLRGENGEL VGVR
Sbjct: 170 VAKDLHSMDWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRR 229
Query: 177 LARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV 234
RQ S++PSSVISSQSMHLGVLATA HA+ T++MF VYYKPRT S+FII ++Y+E+V
Sbjct: 230 AMRQLSNVPSSVISSQSMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESV 289
Query: 235 NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPD 294
N ++VGMR++MRFEGE++PE+RF+GT++G E+ P W +S WRSLKV+WDEP++I RPD
Sbjct: 290 KNNYSVGMRFRMRFEGEEAPEQRFTGTIIGSENLDPVWPESSWRSLKVRWDEPSTIPRPD 349
Query: 295 RVSPWEIEPFVASATPNLVQPV-LAKNKRPR 324
RVSPW+IEP AS+ P V P+ L++ KRPR
Sbjct: 350 RVSPWKIEP--ASSPP--VNPLPLSRVKRPR 376
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/120 (51%), Positives = 87/120 (72%), Gaps = 2/120 (1%)
Query: 507 EKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF 566
EK +Q Q S K+ QSK + + S RS TKV QGVA+GR++DL+ YD L EL++MF
Sbjct: 669 EKSGQQAQQSSKDVQSK-TQVASTRSCTKVHKQGVALGRSVDLSKFSNYDELKAELDKMF 727
Query: 567 DIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLP 625
+ G+L + K W+IVYTD+EGDMMLVGDDPW EFC++V++I+I + ++V+KM+ S P
Sbjct: 728 EFDGELVSSNKNWQIVYTDNEGDMMLVGDDPWEEFCSIVRKIYIYTKEEVQKMNSKSNAP 787
>gi|242073172|ref|XP_002446522.1| hypothetical protein SORBIDRAFT_06g017490 [Sorghum bicolor]
gi|241937705|gb|EES10850.1| hypothetical protein SORBIDRAFT_06g017490 [Sorghum bicolor]
Length = 661
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 215/313 (68%), Positives = 254/313 (81%), Gaps = 6/313 (1%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
MEQLEAST+Q+L+Q +P+F LP KILC VVN+ L AE ++DEVYAQI L PE QNE T+
Sbjct: 54 MEQLEASTHQQLDQYLPMFNLPPKILCSVVNVELRAEADSDEVYAQIMLQPEADQNELTS 113
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
DP P + + HSF K LTASDTSTHGGFSVLR+HA ECLP LDM+ + P QELVAKD
Sbjct: 114 LDPEPQEPEKCTAHSFCKTLTASDTSTHGGFSVLRRHAEECLPQLDMSLNPPCQELVAKD 173
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
LHG EW F+HIFRGQP+RHLLTTGWS FV+SKRLVAGD F+F+RGENGEL VGVR L RQ
Sbjct: 174 LHGTEWHFRHIFRGQPKRHLLTTGWSVFVSSKRLVAGDAFIFMRGENGELRVGVRRLMRQ 233
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKF 238
+SMPSSVISS SMHLGVLATASHA++T T+F V+YKPRTS+ FI+S+NKYLEA K
Sbjct: 234 VNSMPSSVISSHSMHLGVLATASHAISTGTLFSVFYKPRTSRSDFIVSVNKYLEAKKQKI 293
Query: 239 AVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPH----WKDSKWRSLKVQWDEPASITRPD 294
+VGMR+KMRFEG+++PERRFSGT++G+ W DS WRSLKVQWDEP+SI RPD
Sbjct: 294 SVGMRFKMRFEGDEAPERRFSGTIIGIGSLPAMSKSLWADSDWRSLKVQWDEPSSILRPD 353
Query: 295 RVSPWEIEPFVAS 307
R+SPWE+EP A+
Sbjct: 354 RISPWEVEPLDAA 366
>gi|14190369|gb|AAK55665.1|AF378862_1 AT5g62000/mtg10_20 [Arabidopsis thaliana]
gi|24111405|gb|AAN46837.1| At5g62000/mtg10_20 [Arabidopsis thaliana]
Length = 678
Score = 453 bits (1166), Expect = e-124, Method: Compositional matrix adjust.
Identities = 220/332 (66%), Positives = 268/332 (80%), Gaps = 14/332 (4%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPT- 59
+EQ+EASTNQ Q++PL+ LPSK+LCRV+N+ L AE +TDEVYAQITLLPE +Q+E
Sbjct: 88 IEQVEASTNQAAEQQMPLYDLPSKLLCRVINVDLKAEADTDEVYAQITLLPEANQDENAI 147
Query: 60 ---TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQEL 116
P P P PR +VHSF K LTASDTSTHGGFSVLR+HA ECLPPLDM++ PTQEL
Sbjct: 148 EKEAPLPPP---PRFQVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQEL 204
Query: 117 VAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRC 176
VAKDLH EWRF+HIFRGQPRRHLL +GWS FV+SKRLVAGD F+FLRGENGEL VGVR
Sbjct: 205 VAKDLHANEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRR 264
Query: 177 LARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV 234
RQQ ++PSSVISS SMHLGVLATA HA++T TMF VYYKPRT S+FI+ ++Y+E+V
Sbjct: 265 AMRQQGNVPSSVISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESV 324
Query: 235 NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRP 293
N +++GMR+KMRFEGE++PE+RF+GT+VG+E+ P W SKWRSLKV+WDE +SI RP
Sbjct: 325 KNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRP 384
Query: 294 DRVSPWEIEPFVASATPNLVQPV-LAKNKRPR 324
DRVSPW++EP +A P + PV + + KRPR
Sbjct: 385 DRVSPWKVEPALA---PPALSPVPMPRPKRPR 413
>gi|379323190|gb|AFD01294.1| auxin response factor 2-2 [Brassica rapa subsp. pekinensis]
Length = 851
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 221/332 (66%), Positives = 268/332 (80%), Gaps = 8/332 (2%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE-PT 59
+EQ+EASTNQ Q++PL+ LPSKILCRV+N+ L AE +TDEVYAQITLLPEP Q+E
Sbjct: 84 IEQVEASTNQAAEQQMPLYDLPSKILCRVINVDLKAEADTDEVYAQITLLPEPVQDENAI 143
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
+ P PR +VHSF K LTASDTSTHGGFSVLR+HA ECLPPLDM++ PTQELVAK
Sbjct: 144 EKESPPPPPPRFQVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAK 203
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH EWRF+HIFRGQPRRHLL +GWS FV+SKRLVAGD F+FLRGENGEL VGVR R
Sbjct: 204 DLHASEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 263
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNK 237
QQ ++PSSVISS SMHLGVLATA HA++T TMF VYYKPRTS +FI+ ++Y+E+V N
Sbjct: 264 QQGNVPSSVISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNN 323
Query: 238 FAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRV 296
+++GMR+KMRFEGE++PE+RF+GT+VG+ED P W SKWRSLKV+WDE SI RPDRV
Sbjct: 324 YSIGMRFKMRFEGEEAPEQRFTGTIVGIEDSDPTRWAKSKWRSLKVRWDETTSIPRPDRV 383
Query: 297 SPWEIEPFVASATPNLVQPV-LAKNKRPRLSM 327
SPW+IEP + +P + PV + + KRPR ++
Sbjct: 384 SPWKIEPAL---SPPALSPVPMPRPKRPRSNL 412
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/177 (41%), Positives = 110/177 (62%), Gaps = 11/177 (6%)
Query: 453 SCRLFGIELINH--ATSSAPSEKVPVSSLTTEGHIIS-TISAAADSDGKSDIAKEFKEKK 509
+CRLFGI L+N+ T + S++ ++ T I S + +D S + +E+
Sbjct: 645 NCRLFGIPLVNNVNGTDTTLSQRNNLNDCTGPTQIASPKVQDLSDQSKGSKSTNDHREQG 704
Query: 510 QE--QVQVSPKESQSK-QSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF 566
+ + PK+ Q+K SC RS TKVQ QG+A+GR++DL+ Y+ L+ EL+ +F
Sbjct: 705 RPFPVNKPHPKDVQTKTNSC----RSCTKVQKQGIALGRSVDLSKFQNYEELVTELDRLF 760
Query: 567 DIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 622
+ G+L K W IVYTDDE DMMLVGDDPW EFC MV++IFI + ++V+KM+PG+
Sbjct: 761 EFNGELMAPKKDWLIVYTDDENDMMLVGDDPWQEFCCMVRKIFIYTKEEVRKMNPGT 817
>gi|224122162|ref|XP_002318767.1| predicted protein [Populus trichocarpa]
gi|222859440|gb|EEE96987.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 222/331 (67%), Positives = 270/331 (81%), Gaps = 6/331 (1%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE-PT 59
+EQ+EASTNQ +Q++PL+ LP KILCRVVN+ L AE +TDEV+AQ+TLLP +Q+E +
Sbjct: 80 LEQVEASTNQVADQQMPLYDLPPKILCRVVNVQLKAEPDTDEVFAQVTLLPLHNQDENAS 139
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
+P P PR VHSF K LTASDTSTHGGFSVLR+HA ECLPPLDM++ PTQELVAK
Sbjct: 140 EKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAK 199
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLHG EWRF+HIFRGQPRRHLL +GWS FV+SKRLVAGD F+FLRGENGEL VGVR R
Sbjct: 200 DLHGSEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 259
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNK 237
QQS++PSSVISS SMHLGVLATA HAV+T TMF VYYKPRTS +FI+ ++Y+E+V +
Sbjct: 260 QQSNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPAEFIVPFDQYMESVKSN 319
Query: 238 FAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRV 296
+++GMR+KMRFEGE++PE+RF+GT+VG+ED P WKDSKWR LKV+WDE ++I RPDRV
Sbjct: 320 YSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPSRWKDSKWRCLKVRWDETSTIPRPDRV 379
Query: 297 SPWEIEPFVASATPNLVQPVLAKNKRPRLSM 327
SPW+IEP A A P L + + KRPR +M
Sbjct: 380 SPWKIEP--ALAPPALNPLPMPRPKRPRANM 408
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 125/228 (54%), Gaps = 25/228 (10%)
Query: 421 AHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLT 480
AH+ P P L+++ TG+ + +C+LFGI L + A E+ +++
Sbjct: 619 AHTRELIPKPK------LVQEHNTGKSLDG--NCKLFGIPL--KISKPATPEQAGPTNMV 668
Query: 481 TE--GHI-ISTISAAADSDGKSD------IAKEFKEKKQEQVQVSPKESQSKQSCLTSNR 531
E GH ++ ++SD KS+ +A E + +K QV ++ +S R
Sbjct: 669 NEPMGHTQPASHQLTSESDQKSEHSRGSKLADENENEKPLQVGHMRMRDSHGKAQNSSTR 728
Query: 532 SRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMM 590
S TKV QG+A+GR++DLT YD LI EL+ +F+ G+L K W IVYTDDE DMM
Sbjct: 729 SCTKVHKQGIALGRSVDLTRFNNYDELIAELDRLFEFNGELLAPQKNWLIVYTDDEDDMM 788
Query: 591 LVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFS-----IEGED 633
LVGDDPW EF MV++I I + ++V+++ PG+ + +EGED
Sbjct: 789 LVGDDPWQEFVGMVRKIVIYTREEVQRIKPGTLNSRVNENPSGVEGED 836
>gi|242055485|ref|XP_002456888.1| hypothetical protein SORBIDRAFT_03g044630 [Sorghum bicolor]
gi|241928863|gb|EES02008.1| hypothetical protein SORBIDRAFT_03g044630 [Sorghum bicolor]
Length = 704
Score = 450 bits (1158), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/334 (65%), Positives = 264/334 (79%), Gaps = 6/334 (1%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE--P 58
+EQ+EAS NQ ++ L+ LPSK+LCRV+N+ L AE +TDEVYAQI L+PEP Q +
Sbjct: 51 IEQVEASMNQVAGNQMRLYDLPSKLLCRVLNVELKAETDTDEVYAQIMLMPEPEQTDVAA 110
Query: 59 TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
A SPRP V SF K LTASDTSTHGGFSVLR+HA ECLPPLDM QS PTQELVA
Sbjct: 111 EKASSASAASPRPAVRSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVA 170
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
KDLHG EWRF+HIFRGQPRRHLL +GWS FV+SKRLVAGD F+FLRGENGEL VGVR
Sbjct: 171 KDLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAM 230
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNN 236
RQ S++PSSVISSQSMHLGVLATA HA+ T++MF VYYKPRT S+FII ++Y+E+V N
Sbjct: 231 RQLSNVPSSVISSQSMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKN 290
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRV 296
+++GMR++MRFEGE++PE+RF+GT+VG E+ P W DS WR LKV+WDEP++I RPDRV
Sbjct: 291 NYSIGMRFRMRFEGEEAPEQRFTGTIVGCENLDPLWPDSSWRYLKVRWDEPSTIPRPDRV 350
Query: 297 SPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVP 330
SPW+IEP AS+ P P+ ++ KRPR + P
Sbjct: 351 SPWKIEP--ASSPPVNPLPLSSRVKRPRQNAPPP 382
>gi|413951418|gb|AFW84067.1| hypothetical protein ZEAMMB73_313624 [Zea mays]
gi|413951419|gb|AFW84068.1| hypothetical protein ZEAMMB73_313624 [Zea mays]
Length = 812
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/335 (65%), Positives = 265/335 (79%), Gaps = 9/335 (2%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
+EQ+EAS NQ + L+ LPSK+LCRV+N+ L AE +TDEVYAQI L+PEP QN+
Sbjct: 50 IEQVEASMNQVAGNPMRLYDLPSKLLCRVLNVELKAETDTDEVYAQIMLMPEPEQNDVAA 109
Query: 61 PDPCP--ADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
A PRP V SF K LTASDTSTHGGFSVLR+HA ECLP LDM+QS PTQELVA
Sbjct: 110 EKTSSGSAAPPRPAVRSFCKTLTASDTSTHGGFSVLRRHADECLPALDMSQSPPTQELVA 169
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
KDLHG EWRF+HIFRGQPRRHLL +GWS FV+SKRLVAGD F+FLRGENGEL VGVR
Sbjct: 170 KDLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAM 229
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNN 236
RQ S++PSSVISSQSMHLGVLATA HA+ T++MF VYYKPRT S+FII ++Y+E+V N
Sbjct: 230 RQLSNVPSSVISSQSMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKN 289
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRV 296
+++GMR++MRFEGE++PE+RF+GT+VG E+ P W DS WR LKV+WDEP++I RPD+V
Sbjct: 290 NYSIGMRFRMRFEGEEAPEQRFTGTIVGCENLDPLWPDSSWRYLKVRWDEPSTIPRPDKV 349
Query: 297 SPWEIEPFVASATPNLVQPV-LAKNKRPRLSMEVP 330
SPW+IEP AS+ P V P+ L++ KRPR + P
Sbjct: 350 SPWKIEP--ASSPP--VNPLPLSRGKRPRQNAPPP 380
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 118/197 (59%), Gaps = 23/197 (11%)
Query: 447 KTETGTSCRLFGIELINHATSSAPSE-KVPVSSLTTEGHIISTISAAADSDGKSDIAKEF 505
KT G+ ++FG ++ T+ +P + P+S++ H++ T +A ++ + +
Sbjct: 602 KTREGSGFKIFGFQV--DTTNPSPVQLSSPLSAIRE--HVVQTRPSAPVNELQPVQIECL 657
Query: 506 KE----------KKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGY 555
E + +QVQ S K+ QSK S S RS TKV QGVA+GR++DL+ Y
Sbjct: 658 PEVSVSTAGTAAENIQQVQQSSKDIQSK-SQGASTRSCTKVHKQGVALGRSVDLSKFTDY 716
Query: 556 DHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPW------HEFCNMVKRIF 608
L EL++MF+ +G+L + + W+IVYTD+EGDMMLVGDDPW EFCN+V++I+
Sbjct: 717 GELKAELDKMFEFEGELVSANRNWQIVYTDNEGDMMLVGDDPWDPLLTSREFCNIVRKIY 776
Query: 609 ICSSQDVKKMSPGSKLP 625
I + ++V+KM+ S +P
Sbjct: 777 IYTKEEVQKMNSKSSVP 793
>gi|224030853|gb|ACN34502.1| unknown [Zea mays]
gi|413951417|gb|AFW84066.1| hypothetical protein ZEAMMB73_313624 [Zea mays]
Length = 806
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/335 (65%), Positives = 265/335 (79%), Gaps = 9/335 (2%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
+EQ+EAS NQ + L+ LPSK+LCRV+N+ L AE +TDEVYAQI L+PEP QN+
Sbjct: 50 IEQVEASMNQVAGNPMRLYDLPSKLLCRVLNVELKAETDTDEVYAQIMLMPEPEQNDVAA 109
Query: 61 PDPCP--ADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
A PRP V SF K LTASDTSTHGGFSVLR+HA ECLP LDM+QS PTQELVA
Sbjct: 110 EKTSSGSAAPPRPAVRSFCKTLTASDTSTHGGFSVLRRHADECLPALDMSQSPPTQELVA 169
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
KDLHG EWRF+HIFRGQPRRHLL +GWS FV+SKRLVAGD F+FLRGENGEL VGVR
Sbjct: 170 KDLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAM 229
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNN 236
RQ S++PSSVISSQSMHLGVLATA HA+ T++MF VYYKPRT S+FII ++Y+E+V N
Sbjct: 230 RQLSNVPSSVISSQSMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKN 289
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRV 296
+++GMR++MRFEGE++PE+RF+GT+VG E+ P W DS WR LKV+WDEP++I RPD+V
Sbjct: 290 NYSIGMRFRMRFEGEEAPEQRFTGTIVGCENLDPLWPDSSWRYLKVRWDEPSTIPRPDKV 349
Query: 297 SPWEIEPFVASATPNLVQPV-LAKNKRPRLSMEVP 330
SPW+IEP AS+ P V P+ L++ KRPR + P
Sbjct: 350 SPWKIEP--ASSPP--VNPLPLSRGKRPRQNAPPP 380
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/191 (38%), Positives = 118/191 (61%), Gaps = 17/191 (8%)
Query: 447 KTETGTSCRLFGIELINHATSSAPSE-KVPVSSLTTEGHIISTISAAADSDGKSDIAKEF 505
KT G+ ++FG ++ T+ +P + P+S++ H++ T +A ++ + +
Sbjct: 602 KTREGSGFKIFGFQV--DTTNPSPVQLSSPLSAIRE--HVVQTRPSAPVNELQPVQIECL 657
Query: 506 KE----------KKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGY 555
E + +QVQ S K+ QSK S S RS TKV QGVA+GR++DL+ Y
Sbjct: 658 PEVSVSTAGTAAENIQQVQQSSKDIQSK-SQGASTRSCTKVHKQGVALGRSVDLSKFTDY 716
Query: 556 DHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 614
L EL++MF+ +G+L + + W+IVYTD+EGDMMLVGDDPW EFCN+V++I+I + ++
Sbjct: 717 GELKAELDKMFEFEGELVSANRNWQIVYTDNEGDMMLVGDDPWEEFCNIVRKIYIYTKEE 776
Query: 615 VKKMSPGSKLP 625
V+KM+ S +P
Sbjct: 777 VQKMNSKSSVP 787
>gi|295844324|gb|ADG43159.1| auxin response factor 25 [Zea mays]
Length = 801
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/335 (65%), Positives = 265/335 (79%), Gaps = 9/335 (2%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
+EQ+EAS NQ + L+ LPSK+LCRV+N+ L AE +TDEVYAQI L+PEP QN+
Sbjct: 45 IEQVEASMNQVAGNPMRLYDLPSKLLCRVLNVELKAETDTDEVYAQIMLMPEPEQNDVAA 104
Query: 61 PDPCP--ADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
A PRP V SF K LTASDTSTHGGFSVLR+HA ECLP LDM+QS PTQELVA
Sbjct: 105 EKTSSGSAAPPRPAVRSFCKTLTASDTSTHGGFSVLRRHADECLPALDMSQSPPTQELVA 164
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
KDLHG EWRF+HIFRGQPRRHLL +GWS FV+SKRLVAGD F+FLRGENGEL VGVR
Sbjct: 165 KDLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAM 224
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNN 236
RQ S++PSSVISSQSMHLGVLATA HA+ T++MF VYYKPRT S+FII ++Y+E+V N
Sbjct: 225 RQLSNVPSSVISSQSMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKN 284
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRV 296
+++GMR++MRFEGE++PE+RF+GT+VG E+ P W DS WR LKV+WDEP++I RPD+V
Sbjct: 285 NYSIGMRFRMRFEGEEAPEQRFTGTIVGCENLDPLWPDSSWRYLKVRWDEPSTIPRPDKV 344
Query: 297 SPWEIEPFVASATPNLVQPV-LAKNKRPRLSMEVP 330
SPW+IEP AS+ P V P+ L++ KRPR + P
Sbjct: 345 SPWKIEP--ASSPP--VNPLPLSRGKRPRQNAPPP 375
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 74/191 (38%), Positives = 118/191 (61%), Gaps = 17/191 (8%)
Query: 447 KTETGTSCRLFGIELINHATSSAPSE-KVPVSSLTTEGHIISTISAAADSDGKSDIAKEF 505
KT G+ ++FG ++ T+ +P + P+S++ H++ T +A ++ + +
Sbjct: 597 KTREGSGFKIFGFQV--DTTNPSPVQLSSPLSAIRE--HVVQTRPSAPVNELQPVQIECL 652
Query: 506 KE----------KKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGY 555
E + +QVQ S K+ QSK S S RS TKV QGVA+GR++DL+ Y
Sbjct: 653 PEVSVSTAGTAAENIQQVQQSSKDIQSK-SQGASTRSCTKVHKQGVALGRSVDLSKFTDY 711
Query: 556 DHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 614
L EL++MF+ +G+L + + W+IVYTD+EGDMMLVGDDPW EFCN+V++I+I + ++
Sbjct: 712 GELKAELDKMFEFEGELVSANRNWQIVYTDNEGDMMLVGDDPWEEFCNIVRKIYIYTKEE 771
Query: 615 VKKMSPGSKLP 625
V+KM+ S +P
Sbjct: 772 VQKMNSKSSVP 782
>gi|225456475|ref|XP_002284543.1| PREDICTED: auxin response factor 2 [Vitis vinifera]
gi|297734502|emb|CBI15749.3| unnamed protein product [Vitis vinifera]
Length = 862
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 220/332 (66%), Positives = 271/332 (81%), Gaps = 8/332 (2%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
+EQ+EASTNQ +Q++P++ LPSKILCRV+N+ L AE +TDEV+AQ+TLLPEP+Q+E
Sbjct: 87 IEQVEASTNQVSDQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPEPNQDETAQ 146
Query: 61 -PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
+P P PR VHSF K LTASDTSTHGGFSVLR+HA ECLP LDM++ PTQELVAK
Sbjct: 147 EKEPLPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPQLDMSRQPPTQELVAK 206
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLHG EWRF+HIFRGQPRRHLL +GWS FV+SKRLVAGD F+FLRGENGEL VGVR R
Sbjct: 207 DLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 266
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNK 237
QQ ++PSSVISS SMHLGVLATA HA +T TMF VYYKPRTS +FI+ ++Y+E+V N
Sbjct: 267 QQGNVPSSVISSHSMHLGVLATAWHAKSTGTMFTVYYKPRTSPAEFIVPFDQYMESVKNN 326
Query: 238 FAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRV 296
+++GMR+KMRFEGE++PE+RF+GT+VG+ED P W+DSKWR LKV+WDE ++I RPDRV
Sbjct: 327 YSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPKRWRDSKWRCLKVRWDETSTIPRPDRV 386
Query: 297 SPWEIEPFVASATPNLVQPV-LAKNKRPRLSM 327
SPW+IEP V TP + P+ + + KRPR +M
Sbjct: 387 SPWKIEPAV---TPPALNPLPVPRPKRPRSNM 415
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/215 (41%), Positives = 127/215 (59%), Gaps = 24/215 (11%)
Query: 421 AHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLT 480
AHS P P +L Q + K + G +C+LFGI LI + S P+ + S+T
Sbjct: 625 AHSRELMPKP-------ILVQKQEAVKPKDG-NCKLFGIPLIGNPVISEPA--MSYRSMT 674
Query: 481 TE--GHIISTISAAADSDGKSDIAKEFKE--------KKQEQVQVSPKESQSKQSCL--T 528
E GH+ +A DSD KS+ +K K ++++ Q S S+ Q +
Sbjct: 675 NEPAGHL-HLAPSAFDSDQKSEQSKGAKSTDNPLAVSEQEKPCQTSLPLSRDVQGKVQSV 733
Query: 529 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEG 587
S RS TKV QG+A+GR++DLT YD LI EL+++F+ G+L K W IVYTDDEG
Sbjct: 734 STRSCTKVHKQGIALGRSVDLTKFNNYDELIAELDQLFEFGGELMAPKKNWLIVYTDDEG 793
Query: 588 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 622
DMMLVGDDPW EFC MV++I+I + ++V++M+PG+
Sbjct: 794 DMMLVGDDPWQEFCGMVRKIYIYTREEVQRMNPGT 828
>gi|413951416|gb|AFW84065.1| hypothetical protein ZEAMMB73_313624 [Zea mays]
Length = 728
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/335 (65%), Positives = 265/335 (79%), Gaps = 9/335 (2%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
+EQ+EAS NQ + L+ LPSK+LCRV+N+ L AE +TDEVYAQI L+PEP QN+
Sbjct: 50 IEQVEASMNQVAGNPMRLYDLPSKLLCRVLNVELKAETDTDEVYAQIMLMPEPEQNDVAA 109
Query: 61 PDPCP--ADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
A PRP V SF K LTASDTSTHGGFSVLR+HA ECLP LDM+QS PTQELVA
Sbjct: 110 EKTSSGSAAPPRPAVRSFCKTLTASDTSTHGGFSVLRRHADECLPALDMSQSPPTQELVA 169
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
KDLHG EWRF+HIFRGQPRRHLL +GWS FV+SKRLVAGD F+FLRGENGEL VGVR
Sbjct: 170 KDLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAM 229
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNN 236
RQ S++PSSVISSQSMHLGVLATA HA+ T++MF VYYKPRT S+FII ++Y+E+V N
Sbjct: 230 RQLSNVPSSVISSQSMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKN 289
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRV 296
+++GMR++MRFEGE++PE+RF+GT+VG E+ P W DS WR LKV+WDEP++I RPD+V
Sbjct: 290 NYSIGMRFRMRFEGEEAPEQRFTGTIVGCENLDPLWPDSSWRYLKVRWDEPSTIPRPDKV 349
Query: 297 SPWEIEPFVASATPNLVQPV-LAKNKRPRLSMEVP 330
SPW+IEP AS+ P V P+ L++ KRPR + P
Sbjct: 350 SPWKIEP--ASSPP--VNPLPLSRGKRPRQNAPPP 380
>gi|297793759|ref|XP_002864764.1| hypothetical protein ARALYDRAFT_919450 [Arabidopsis lyrata subsp.
lyrata]
gi|297310599|gb|EFH41023.1| hypothetical protein ARALYDRAFT_919450 [Arabidopsis lyrata subsp.
lyrata]
Length = 858
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 219/329 (66%), Positives = 266/329 (80%), Gaps = 8/329 (2%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE-PT 59
+EQ+EASTNQ Q++PL+ LPSK+LCRV+N+ L AE +TDEVYAQITLLPE +Q+E
Sbjct: 84 IEQVEASTNQAAEQQMPLYDLPSKLLCRVINVDLKAEADTDEVYAQITLLPEANQDENAI 143
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
+ P PR +VHSF K LTASDTSTHGGFSVLR+HA ECLPPLDM++ PTQELVAK
Sbjct: 144 EKEAPPPPPPRFQVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAK 203
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH EWRF+HIFRGQPRRHLL +GWS FV+SKRLVAGD F+FLRGENGEL VGVR R
Sbjct: 204 DLHANEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 263
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNK 237
QQ ++PSSVISS SMHLGVLATA HA++T TMF VYYKPRT S+FI+ ++Y+E+V N
Sbjct: 264 QQGNVPSSVISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNN 323
Query: 238 FAVGMRYKMRFEGEDSPERRFSGTVVGVEDFS-PHWKDSKWRSLKVQWDEPASITRPDRV 296
+++GMR+KMRFEGE++PE+RF+GT+VG+ED W SKWRSLKV+WDE +SI RPDRV
Sbjct: 324 YSIGMRFKMRFEGEEAPEQRFTGTIVGIEDSDITRWPKSKWRSLKVRWDETSSIPRPDRV 383
Query: 297 SPWEIEPFVASATPNLVQPV-LAKNKRPR 324
SPW+IEP +A P + PV + + KRPR
Sbjct: 384 SPWKIEPALA---PPALSPVPMPRPKRPR 409
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 113/188 (60%), Gaps = 11/188 (5%)
Query: 441 QVETGRKTETGTSCRLFGIELINH--ATSSAPSEKVPVSSLTTEGHIIS-TISAAADSDG 497
Q ET + E +CRLFGI L N+ T SA S++ ++ + S + D
Sbjct: 643 QEETAKSREG--NCRLFGIPLSNNMNGTDSAMSQRSNLNDAAGLTQLASPKVQDLPDQSK 700
Query: 498 KSDIAKEFKEKKQ--EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGY 555
S + +E+ + + PK++ +K + S+RS TKV QG+A+GR++DL+ Y
Sbjct: 701 GSKSTNDHREQGRPFQTNNPHPKDAHTKSN---SSRSCTKVHKQGIALGRSVDLSKFQNY 757
Query: 556 DHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 614
+ LI EL+ +F+ G+L K W IVYTDDE DMMLVGDDPW EFC MV++IFI + ++
Sbjct: 758 EELIAELDRLFEFNGELMAPKKDWLIVYTDDENDMMLVGDDPWQEFCCMVRKIFIYTKEE 817
Query: 615 VKKMSPGS 622
V+KM+PG+
Sbjct: 818 VRKMNPGT 825
>gi|359386136|gb|AEV43357.1| auxin-response factor [Citrus sinensis]
Length = 846
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/331 (65%), Positives = 269/331 (81%), Gaps = 6/331 (1%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE-PT 59
+EQ+EASTNQ +Q++P++ LPSKILCRV+N+ L AE +TDEV+AQ+TLLPE +Q+E
Sbjct: 75 IEQVEASTNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAV 134
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
+P P PR VHSF K LTASDTSTHGGFSVLR+HA ECLPPLDM++ PTQEL AK
Sbjct: 135 EKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAK 194
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLHG EWRF+HIFRGQPRRHLL +GWS FV+SKRLVAGD F+FLRGENGEL VGVR R
Sbjct: 195 DLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 254
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNK 237
QQ ++PSSVISS SMHLGVLATA HAV+T TMF VYYKPRTS +FI+ ++Y+E++ N
Sbjct: 255 QQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN 314
Query: 238 FAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRV 296
+++GMR+KMRFEGE++PE+RF+GT+VG+ED P W+DSKWR LKV+WDE ++I RP+RV
Sbjct: 315 YSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERV 374
Query: 297 SPWEIEPFVASATPNLVQPVLAKNKRPRLSM 327
SPW+IEP A A P L + + KRPR +M
Sbjct: 375 SPWKIEP--ALAPPALNSLPMPRPKRPRSNM 403
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/202 (42%), Positives = 113/202 (55%), Gaps = 26/202 (12%)
Query: 449 ETGTS--CRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISA---AADSDGKSDIAK 503
E G S C+LFGI L ++ P VS T + A +SD KS+ +K
Sbjct: 628 EAGKSKDCKLFGIPLFSNHVMPEPV----VSHRNTMNEPAGNLDQQFRAFESDQKSEHSK 683
Query: 504 EFK-----------EKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTL 552
K EK + Q K+ +SK C S RS TKVQ QG+A+GR++DL+
Sbjct: 684 SSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQC-GSTRSCTKVQKQGIALGRSVDLSKF 742
Query: 553 VGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICS 611
YD LI EL+++F+ G+L K W IVYTDDEGDMMLVGDDPW EFC MV++IFI +
Sbjct: 743 NNYDELIAELDQLFEFDGELMAPKKNWLIVYTDDEGDMMLVGDDPWQEFCGMVRKIFIYT 802
Query: 612 SQDVKKMSPGSKLPMFSIEGED 633
++V KM+ S S +GED
Sbjct: 803 KEEVLKMNSVS----LSSKGED 820
>gi|47716275|emb|CAG30068.1| putative auxin response factor [Brassica napus]
Length = 848
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 220/332 (66%), Positives = 267/332 (80%), Gaps = 8/332 (2%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
+EQ+EASTNQ Q++PL+ LPSKILCRV+N+ L AE +TDEVYAQITLLPEP Q+E +
Sbjct: 83 IEQVEASTNQAAEQQMPLYDLPSKILCRVINVDLKAEADTDEVYAQITLLPEPVQDENSI 142
Query: 61 -PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
+ P PR +VHSF K LTASDTSTHGGFSVLR+HA ECLPPLDM++ PTQELVAK
Sbjct: 143 EKEAPPPPPPRFQVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAK 202
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH EWRF+HIFRGQPRRHLL +GWS FV+SKRLVAGD F+FLRGENGEL VGVR R
Sbjct: 203 DLHASEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 262
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNK 237
QQ ++PSSVISS SMHLGVLATA HA++T TMF VYYKPRTS +FI+ ++Y E+V
Sbjct: 263 QQGNVPSSVISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYTESVKIN 322
Query: 238 FAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRV 296
+++GMR+KMRFEGE++PE+RF+GT+VG+ED P W SKWRSLKV+WDE SI RPDRV
Sbjct: 323 YSIGMRFKMRFEGEEAPEQRFTGTIVGIEDSDPTRWAKSKWRSLKVRWDETTSIPRPDRV 382
Query: 297 SPWEIEPFVASATPNLVQPV-LAKNKRPRLSM 327
SPW+IEP + +P + PV + + KRPR ++
Sbjct: 383 SPWKIEPAL---SPPALSPVPMPRPKRPRSNL 411
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 106/174 (60%), Gaps = 5/174 (2%)
Query: 453 SCRLFGIELINH--ATSSAPSEKVPVSSLTTEGHIIS-TISAAADSDGKSDIAKEFKEKK 509
+CRLFGI L+N+ T + S++ ++ + S + +D S + +E+
Sbjct: 642 NCRLFGIPLVNNVNGTDTTLSQRNNLNDPAGPTQMASPKVQDLSDQSKGSKSTNDHREQG 701
Query: 510 QEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK 569
+ VS + Q+ S RS TKVQ QG+A+GR++DL+ Y+ L+ EL+ +F+
Sbjct: 702 RP-FPVSKPHPKDVQTKTNSCRSCTKVQKQGIALGRSVDLSKFQNYEELVTELDRLFEFN 760
Query: 570 GQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 622
G+L K W IVYTDDE DMMLVGDDPW EFC MV++IFI + ++V+KM+PG+
Sbjct: 761 GELMAPKKDWLIVYTDDENDMMLVGDDPWQEFCCMVRKIFIYTKEEVRKMNPGT 814
>gi|147791931|emb|CAN67897.1| hypothetical protein VITISV_040395 [Vitis vinifera]
Length = 946
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 220/332 (66%), Positives = 271/332 (81%), Gaps = 8/332 (2%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
+EQ+EASTNQ +Q++P++ LPSKILCRV+N+ L AE +TDEV+AQ+TLLPEP+Q+E
Sbjct: 87 IEQVEASTNQVSDQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPEPNQDETAQ 146
Query: 61 -PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
+P P PR VHSF K LTASDTSTHGGFSVLR+HA ECLP LDM++ PTQELVAK
Sbjct: 147 EKEPLPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPQLDMSRQPPTQELVAK 206
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLHG EWRF+HIFRGQPRRHLL +GWS FV+SKRLVAGD F+FLRGENGEL VGVR R
Sbjct: 207 DLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 266
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNK 237
QQ ++PSSVISS SMHLGVLATA HA +T TMF VYYKPRTS +FI+ ++Y+E+V N
Sbjct: 267 QQGNVPSSVISSHSMHLGVLATAWHAKSTGTMFTVYYKPRTSPAEFIVPFDQYMESVKNN 326
Query: 238 FAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRV 296
+++GMR+KMRFEGE++PE+RF+GT+VG+ED P W+DSKWR LKV+WDE ++I RPDRV
Sbjct: 327 YSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPKRWRDSKWRCLKVRWDETSTIPRPDRV 386
Query: 297 SPWEIEPFVASATPNLVQPV-LAKNKRPRLSM 327
SPW+IEP V TP + P+ + + KRPR +M
Sbjct: 387 SPWKIEPAV---TPPALNPLPVPRPKRPRSNM 415
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/260 (34%), Positives = 128/260 (49%), Gaps = 69/260 (26%)
Query: 421 AHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLT 480
AHS P P +L Q + K + G +C+LFGI LI + S P+ + S+T
Sbjct: 625 AHSRELMPKP-------ILVQKQEAVKPKDG-NCKLFGIPLIGNPVISEPA--MSYRSMT 674
Query: 481 TE--GHIISTISAAADSDGKSDIAKEFKE--------KKQEQVQVSPKESQSKQSCL--T 528
E GH+ +A DSD KS+ +K K ++++ Q S S+ Q +
Sbjct: 675 NEPAGHL-HLAPSAFDSDQKSEQSKGAKSTDNPLAVSEQEKPCQTSLPLSRDVQGKVQSV 733
Query: 529 SNRSRTKVQM---------------------------------------------QGVAV 543
S RS TKV + QG+A+
Sbjct: 734 STRSCTKVCIHSLDGCWFLNNEYEIWKMLAGYKIVPQICFIAVSCLMSIGNLVHKQGIAL 793
Query: 544 GRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCN 602
GR++DLT YD LI EL+++F+ G+L K W IVYTDDEGDMMLVGDDPW EFC
Sbjct: 794 GRSVDLTKFNNYDELIAELDQLFEFGGELMAPKKNWLIVYTDDEGDMMLVGDDPWQEFCG 853
Query: 603 MVKRIFICSSQDVKKMSPGS 622
MV++I+I + ++V++M+PG+
Sbjct: 854 MVRKIYIYTREEVQRMNPGT 873
>gi|307136001|gb|ADN33857.1| auxin response factor-like protein [Cucumis melo subsp. melo]
Length = 840
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 216/331 (65%), Positives = 267/331 (80%), Gaps = 6/331 (1%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE-PT 59
+EQ+EAST+Q +Q++P++ LPSKILCRV+N+HL AE ETDEV+AQITLLPE +Q+E
Sbjct: 71 IEQVEASTSQVADQQMPVYNLPSKILCRVINVHLKAEPETDEVFAQITLLPEANQDEHAV 130
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
+P P R VHSF K LTASDTSTHGGFSVLR+HA ECLPPLDM++ PTQELVAK
Sbjct: 131 DKEPPPPPPRRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAK 190
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLHG EWRF+HIFRGQPRRHLL +GWS FV+SKRLVAGD F+FLRGENGEL VGVR R
Sbjct: 191 DLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 250
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNK 237
Q ++PSSVISS SMHLGVLATA HA++T TMF VYYKPRTS +FI+ ++Y+E++
Sbjct: 251 QHGNVPSSVISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPYDQYMESIKKS 310
Query: 238 FAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRV 296
+ +GMR+KMRFEGE++PE+RF+GT++G ED P WKDSKWR LKV+WDE ++I+RP++V
Sbjct: 311 YTIGMRFKMRFEGEEAPEQRFTGTIIGCEDADPKRWKDSKWRCLKVRWDETSTISRPEKV 370
Query: 297 SPWEIEPFVASATPNLVQPVLAKNKRPRLSM 327
SPW+IEP A A P L + + KRPR +M
Sbjct: 371 SPWKIEP--ALAPPALNPLPMTRPKRPRSNM 399
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 84/206 (40%), Positives = 125/206 (60%), Gaps = 18/206 (8%)
Query: 425 HSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVS---SLTT 481
HS+ SKP +L Q + K + G +C+LFGI L+ + P+ PV ++
Sbjct: 612 HSSELMSKP----MLFQNQDILKPKDG-NCKLFGISLVKN-----PAIPDPVGLNRNMMN 661
Query: 482 EGHII-STISA--AADSDGKSDIAKEFK-EKKQEQVQVSPKESQSKQSCLTSNRSRTKVQ 537
E ++ S + + +S KS++ + K K + + K Q+ +S TS RS TKV
Sbjct: 662 EADVMHSNVHQIHSIESGLKSELPRGSKLADKSVAISEADKLQQTCKSQGTSARSCTKVH 721
Query: 538 MQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDP 596
QG+A+GR++DL+ YD L+ EL+++F+ G+L K W IVYTDDEGDMMLVGDDP
Sbjct: 722 KQGIALGRSVDLSRFNNYDELVAELDQLFEFGGELLAPKKNWLIVYTDDEGDMMLVGDDP 781
Query: 597 WHEFCNMVKRIFICSSQDVKKMSPGS 622
W EFC MV++IFI + ++V+KM+PGS
Sbjct: 782 WREFCGMVRKIFIYTREEVQKMNPGS 807
>gi|225425242|ref|XP_002268849.1| PREDICTED: auxin response factor 2-like [Vitis vinifera]
Length = 769
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 215/331 (64%), Positives = 267/331 (80%), Gaps = 6/331 (1%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
+EQ+EASTNQ +Q++P + L +KILCRV+N+HL AE +TDEV+AQ+TLLPEP Q+E +
Sbjct: 40 LEQVEASTNQVADQQMPAYDLRAKILCRVINVHLKAESDTDEVFAQVTLLPEPKQDENSA 99
Query: 61 -PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
+ +PRP+VHSF K LTASDTSTHGGFSVLR+HA ECLPPLDM++ PTQELVAK
Sbjct: 100 EKEDVLTPTPRPRVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELVAK 159
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLHG EWRF+HIFRGQPRRHLL +GWS FV+SK+LVAGD F+FLRGENGEL VGVR R
Sbjct: 160 DLHGNEWRFRHIFRGQPRRHLLQSGWSLFVSSKKLVAGDAFIFLRGENGELRVGVRRAMR 219
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNK 237
Q S+ PSSVISS SMHLGVLATA HAV+T T+F VYYKPRTS +FII ++Y+EAV N
Sbjct: 220 QLSNGPSSVISSHSMHLGVLATAWHAVSTGTIFTVYYKPRTSPAEFIIPFDQYMEAVKNH 279
Query: 238 FAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRV 296
+++GMR+KM+FEGE++PE+RF+GTV+G ED P W SKWR LKV+WDE +S+ RP+ V
Sbjct: 280 YSIGMRFKMKFEGEEAPEQRFTGTVIGTEDADPMRWPGSKWRCLKVRWDETSSVPRPECV 339
Query: 297 SPWEIEPFVASATPNLVQPVLAKNKRPRLSM 327
SPW IE VA P+L ++++KRPR +M
Sbjct: 340 SPWNIE--VALTPPSLNPLPVSRSKRPRANM 368
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/205 (38%), Positives = 117/205 (57%), Gaps = 10/205 (4%)
Query: 420 PAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSA---PSEKVPV 476
P +TPH L Q E + G +C+LFGI LI+ ++ P ++ +
Sbjct: 530 PHSYSETTPHLMGLKPQPLYVQEEVVKSKGDG-NCKLFGISLISKPAANPMHRPQGEIQL 588
Query: 477 SSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKV 536
+ H + S+ G + K F+ +Q Q+S ++ QSK S RS KV
Sbjct: 589 TMENPARHPEQSKSSKYMEIGGFEHEKPFQALEQ---QLS-RDDQSKLHS-GSTRSCIKV 643
Query: 537 QMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDD 595
QG+AVGR++DLT GY LI EL+++F+ G+L + K W IV+TDDEGDMMLVGDD
Sbjct: 644 HKQGIAVGRSVDLTKFNGYTELISELDQIFEFNGELISLNKDWLIVFTDDEGDMMLVGDD 703
Query: 596 PWHEFCNMVKRIFICSSQDVKKMSP 620
PW EFC+MV++IF+ + +++++M P
Sbjct: 704 PWPEFCSMVRKIFVYTREEIQRMDP 728
>gi|326512148|dbj|BAJ96055.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326517244|dbj|BAJ99988.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 801
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 217/338 (64%), Positives = 268/338 (79%), Gaps = 12/338 (3%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE--- 57
+EQ+EAS NQ ++ L+ LP K+LCRV+N+ L AE +TDEVYAQ+ L+PEP QNE
Sbjct: 48 IEQVEASMNQVAGNQMRLYDLPPKLLCRVINVELKAEADTDEVYAQVMLMPEPEQNEMAV 107
Query: 58 PTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELV 117
+ A PRP V SF K LTASDTSTHGGFSVLR+HA ECLPPLDM QS PTQELV
Sbjct: 108 DKSTSTTGATPPRPAVRSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTQSPPTQELV 167
Query: 118 AKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCL 177
AKDLHG +WRF+HIFRGQPRRHLL +GWS FV+SKRLVAGD F+FLRGE+GEL VGVR
Sbjct: 168 AKDLHGMDWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGESGELRVGVRRA 227
Query: 178 ARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVN 235
RQ S++PSSVISS SMHLGVLATA HA+ T++MF VYYKPRT S+FII ++Y+E+V
Sbjct: 228 MRQLSNVPSSVISSHSMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVK 287
Query: 236 NKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDR 295
N +++GMR++MRFEGE++PE+RF+GT+VG E+ W +S WRSLKV+WDEP++I RPDR
Sbjct: 288 NNYSIGMRFRMRFEGEEAPEQRFTGTIVGSENLDQLWPESNWRSLKVRWDEPSTIPRPDR 347
Query: 296 VSPWEIEPFVASATPNLVQPV-LAKNKRPRLSMEVPPL 332
VSPW+IEP AS+ P V P+ L++ KRPR + VPP+
Sbjct: 348 VSPWKIEP--ASSPP--VNPLPLSRVKRPRPN--VPPV 379
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 110/192 (57%), Gaps = 17/192 (8%)
Query: 447 KTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSD---GKSDIAK 503
K G+ ++FG ++ T+SAPS + + ++ T ++A+ + D
Sbjct: 588 KAREGSGFKIFGFKV---DTTSAPSNHLSSTMAVIHEPVLQTQASASLTQLQHAHIDCIP 644
Query: 504 EF---------KEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVG 554
E EK +Q S K+ QSK S S RS TKV QGVA+GR++DL+
Sbjct: 645 ELSVSTAGTTENEKSIQQAPNSSKDVQSK-SHGASTRSCTKVHKQGVALGRSVDLSKFGD 703
Query: 555 YDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQ 613
YD L EL+ MF+ G+L + + W+IVYTD EGDMMLVGDDPW EFC++V++IFI + +
Sbjct: 704 YDELTAELDRMFEFDGELMSSNRDWQIVYTDPEGDMMLVGDDPWEEFCSIVRKIFIYTKE 763
Query: 614 DVKKMSPGSKLP 625
+V+KM+ S P
Sbjct: 764 EVQKMNSKSSTP 775
>gi|296088177|emb|CBI35669.3| unnamed protein product [Vitis vinifera]
Length = 767
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 215/331 (64%), Positives = 267/331 (80%), Gaps = 6/331 (1%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
+EQ+EASTNQ +Q++P + L +KILCRV+N+HL AE +TDEV+AQ+TLLPEP Q+E +
Sbjct: 40 LEQVEASTNQVADQQMPAYDLRAKILCRVINVHLKAESDTDEVFAQVTLLPEPKQDENSA 99
Query: 61 -PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
+ +PRP+VHSF K LTASDTSTHGGFSVLR+HA ECLPPLDM++ PTQELVAK
Sbjct: 100 EKEDVLTPTPRPRVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELVAK 159
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLHG EWRF+HIFRGQPRRHLL +GWS FV+SK+LVAGD F+FLRGENGEL VGVR R
Sbjct: 160 DLHGNEWRFRHIFRGQPRRHLLQSGWSLFVSSKKLVAGDAFIFLRGENGELRVGVRRAMR 219
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNK 237
Q S+ PSSVISS SMHLGVLATA HAV+T T+F VYYKPRTS +FII ++Y+EAV N
Sbjct: 220 QLSNGPSSVISSHSMHLGVLATAWHAVSTGTIFTVYYKPRTSPAEFIIPFDQYMEAVKNH 279
Query: 238 FAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRV 296
+++GMR+KM+FEGE++PE+RF+GTV+G ED P W SKWR LKV+WDE +S+ RP+ V
Sbjct: 280 YSIGMRFKMKFEGEEAPEQRFTGTVIGTEDADPMRWPGSKWRCLKVRWDETSSVPRPECV 339
Query: 297 SPWEIEPFVASATPNLVQPVLAKNKRPRLSM 327
SPW IE VA P+L ++++KRPR +M
Sbjct: 340 SPWNIE--VALTPPSLNPLPVSRSKRPRANM 368
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/220 (36%), Positives = 121/220 (55%), Gaps = 10/220 (4%)
Query: 405 LFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINH 464
L E N + P +TPH L Q E + G +C+LFGI LI+
Sbjct: 515 LGAEQCPGNWLLPLLPHSYSETTPHLMGLKPQPLYVQEEVVKSKGDG-NCKLFGISLISK 573
Query: 465 ATSSA---PSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQ 521
++ P ++ ++ H + S+ G + K F+ +Q Q+S ++ Q
Sbjct: 574 PAANPMHRPQGEIQLTMENPARHPEQSKSSKYMEIGGFEHEKPFQALEQ---QLS-RDDQ 629
Query: 522 SKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEI 580
SK S RS KV QG+AVGR++DLT GY LI EL+++F+ G+L + K W I
Sbjct: 630 SKLHS-GSTRSCIKVHKQGIAVGRSVDLTKFNGYTELISELDQIFEFNGELISLNKDWLI 688
Query: 581 VYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 620
V+TDDEGDMMLVGDDPW EFC+MV++IF+ + +++++M P
Sbjct: 689 VFTDDEGDMMLVGDDPWPEFCSMVRKIFVYTREEIQRMDP 728
>gi|356513463|ref|XP_003525433.1| PREDICTED: auxin response factor 2-like [Glycine max]
Length = 858
Score = 444 bits (1141), Expect = e-121, Method: Compositional matrix adjust.
Identities = 215/328 (65%), Positives = 261/328 (79%), Gaps = 6/328 (1%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE-PT 59
+EQ+EASTNQ Q +P++ LP KILCRV+N+ L AE +TDEV+AQ+TLLPEP+Q+E
Sbjct: 84 IEQVEASTNQVAEQHMPVYDLPPKILCRVINVMLKAEPDTDEVFAQVTLLPEPNQDENAV 143
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
+ PA PR VHSF K LTASDTSTHGGFSVLR+HA ECLPPLDM + PTQELVAK
Sbjct: 144 EKEGPPAAPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTKQPPTQELVAK 203
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLHG EWRF+HIFRGQPRRHLL +GWS FV+SKRLVAGD F+FLRGENGEL VGVR R
Sbjct: 204 DLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 263
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNK 237
QQ ++PSSVISS SMHLGVLATA HA+ T TMF VYYKPRTS +FI+ ++Y+E++ N
Sbjct: 264 QQGNVPSSVISSHSMHLGVLATAWHAILTGTMFTVYYKPRTSPAEFIVPYDQYMESLKNN 323
Query: 238 FAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRV 296
+ +GMR+KMRFEGE++PE+RF+GT+VG+ED + W SKWRSLKV+WDE ++I RP+RV
Sbjct: 324 YTIGMRFKMRFEGEEAPEQRFTGTIVGIEDADTKRWPKSKWRSLKVRWDETSNIPRPERV 383
Query: 297 SPWEIEPFVASATPNLVQPVLAKNKRPR 324
S W+IEP A A P L + + KRPR
Sbjct: 384 SQWKIEP--ALAPPALNPLPMPRPKRPR 409
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/216 (39%), Positives = 122/216 (56%), Gaps = 22/216 (10%)
Query: 426 STPHPSKPNNDTLLEQVETGRKTETG----TSCRLFGIELINHATSSAPS---EKVPVSS 478
STP+ S P + LL + +G+ E + C+LFGI L++ + PS VP S
Sbjct: 614 STPYES-PRSRELLPKPISGKPCEVSKPKDSDCKLFGISLLSSPIAPEPSVSQRNVP-SE 671
Query: 479 LTTEGHIISTISAAADSDGKSDIAK-----------EFKEKKQEQVQVSPKESQSKQSCL 527
H S A D+D KS+ ++ + EK + Q K+ Q+K S
Sbjct: 672 PVGHMHTTSHQQRAFDNDQKSEHSRGGSKPADGLLIDDHEKVLQTSQTHLKDIQAK-SHS 730
Query: 528 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDE 586
S RS TKV +G+A+GR++DLT Y LI EL+++F+ G L + K W IVYTD+E
Sbjct: 731 GSARSCTKVHKKGIALGRSVDLTKFSDYGELIAELDQLFEFGGLLTSPQKDWLIVYTDNE 790
Query: 587 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 622
GDMMLVGDDPW EF MV++I+I ++++KMSPG+
Sbjct: 791 GDMMLVGDDPWQEFVAMVRKIYIYPKEEIQKMSPGT 826
>gi|449440496|ref|XP_004138020.1| PREDICTED: auxin response factor 2-like [Cucumis sativus]
Length = 839
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 214/331 (64%), Positives = 267/331 (80%), Gaps = 6/331 (1%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE-PT 59
+EQ+EAST+Q +Q++P++ LPSKILCRV+N+HL AE +TDEV+AQITLLPE +Q+E
Sbjct: 71 IEQVEASTSQVADQQMPVYNLPSKILCRVINVHLKAEPDTDEVFAQITLLPEANQDEHAV 130
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
+P P R VHSF K LTASDTSTHGGFSVLR+HA ECLPPLDM++ PTQELVAK
Sbjct: 131 DKEPPPPPPRRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAK 190
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLHG EWRF+HIFRGQPRRHLL +GWS FV+SKRLVAGD F+FLRGENGEL VGVR R
Sbjct: 191 DLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 250
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNK 237
Q ++PSSVISS SMHLGVLATA HA++T T+F VYYKPRTS +FI+ ++Y+E++
Sbjct: 251 QHGNVPSSVISSHSMHLGVLATAWHAISTGTLFTVYYKPRTSPSEFIVPYDQYMESIKKS 310
Query: 238 FAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRV 296
+ +GMR+KMRFEGE++PE+RF+GT++G ED P WKDSKWR LKV+WDE ++I+RP++V
Sbjct: 311 YTIGMRFKMRFEGEEAPEQRFTGTIIGCEDADPKRWKDSKWRCLKVRWDETSTISRPEKV 370
Query: 297 SPWEIEPFVASATPNLVQPVLAKNKRPRLSM 327
SPW+IEP A A P L + + KRPR +M
Sbjct: 371 SPWKIEP--ALAPPALNPLPMTRPKRPRSNM 399
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/223 (39%), Positives = 133/223 (59%), Gaps = 25/223 (11%)
Query: 425 HSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVS---SLTT 481
HS+ SKP +L Q + K + G +C+LFGI L+ + P+ PV ++
Sbjct: 612 HSSELMSKP----MLFQNQDILKPKDG-NCKLFGISLVKN-----PAIPDPVGLNRNMMN 661
Query: 482 EGHIISTISA---AADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQM 538
E ++ +++S KS++ + K K + + K Q+ +S TS RS TKV
Sbjct: 662 EADVMHPNVHQIHSSESGLKSELPRVLKLDKSVAISEADKLQQTCKSQGTSARSCTKVHK 721
Query: 539 QGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPW 597
QG+A+GR++DL+ YD L+ EL+++F+ G+L K W IVYTDDEGDMMLVGDDPW
Sbjct: 722 QGIALGRSVDLSRFNNYDELVAELDQLFEFGGELQAPKKNWLIVYTDDEGDMMLVGDDPW 781
Query: 598 HEFCNMVKRIFICSSQDVKKMSPGS------KLPMFSIEGEDI 634
EFC MV++IFI + ++V+KM+PGS + P S+EGE++
Sbjct: 782 REFCGMVRKIFIYTREEVQKMNPGSLNLKGDENP--SVEGEEV 822
>gi|449531444|ref|XP_004172696.1| PREDICTED: auxin response factor 2-like, partial [Cucumis sativus]
Length = 718
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 214/331 (64%), Positives = 267/331 (80%), Gaps = 6/331 (1%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE-PT 59
+EQ+EAST+Q +Q++P++ LPSKILCRV+N+HL AE +TDEV+AQITLLPE +Q+E
Sbjct: 71 IEQVEASTSQVADQQMPVYNLPSKILCRVINVHLKAEPDTDEVFAQITLLPEANQDEHAV 130
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
+P P R VHSF K LTASDTSTHGGFSVLR+HA ECLPPLDM++ PTQELVAK
Sbjct: 131 DKEPPPPPPRRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAK 190
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLHG EWRF+HIFRGQPRRHLL +GWS FV+SKRLVAGD F+FLRGENGEL VGVR R
Sbjct: 191 DLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 250
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNK 237
Q ++PSSVISS SMHLGVLATA HA++T T+F VYYKPRTS +FI+ ++Y+E++
Sbjct: 251 QHGNVPSSVISSHSMHLGVLATAWHAISTGTLFTVYYKPRTSPSEFIVPYDQYMESIKKS 310
Query: 238 FAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRV 296
+ +GMR+KMRFEGE++PE+RF+GT++G ED P WKDSKWR LKV+WDE ++I+RP++V
Sbjct: 311 YTIGMRFKMRFEGEEAPEQRFTGTIIGCEDADPKRWKDSKWRCLKVRWDETSTISRPEKV 370
Query: 297 SPWEIEPFVASATPNLVQPVLAKNKRPRLSM 327
SPW+IEP A A P L + + KRPR +M
Sbjct: 371 SPWKIEP--ALAPPALNPLPMTRPKRPRSNM 399
>gi|356508865|ref|XP_003523174.1| PREDICTED: auxin response factor 2-like [Glycine max]
Length = 843
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 215/328 (65%), Positives = 265/328 (80%), Gaps = 6/328 (1%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE-PT 59
+EQ+EASTNQ +Q +P++ LP KILCRV+N+ L AE +TDEV+AQ+TLLPEP+Q+E
Sbjct: 66 IEQVEASTNQVADQHMPVYDLPPKILCRVINVQLKAEPDTDEVFAQVTLLPEPNQDENAV 125
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
+P P PR VHSF K LTASDTSTHGGFSVLR+HA ECLPPLDM++ PTQELVAK
Sbjct: 126 EKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELVAK 185
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH EWRFKHIFRGQPRRHLL +GWS FV+SKRLVAGD F+FLRGENGEL VGVR R
Sbjct: 186 DLHANEWRFKHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 245
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNK 237
QQ ++PSSVISS SMHLGVLATA HA++T T+F VYYKPRTS +FI+ ++Y+E++ N
Sbjct: 246 QQGNVPSSVISSHSMHLGVLATAWHAISTGTIFTVYYKPRTSPAEFIVPYDQYMESLKNN 305
Query: 238 FAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRV 296
+++GMR+KMRFEGE++PE+RF+GT+VG+ED P W+DSKWR LKV+WDE ++ RP+RV
Sbjct: 306 YSIGMRFKMRFEGEEAPEQRFTGTIVGIEDSDPKRWRDSKWRCLKVRWDETSNTPRPERV 365
Query: 297 SPWEIEPFVASATPNLVQPVLAKNKRPR 324
SPW+IEP A A P L + + KRPR
Sbjct: 366 SPWKIEP--ALAPPALNPLSMPRPKRPR 391
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 110/181 (60%), Gaps = 13/181 (7%)
Query: 454 CRLFGIELINHATSSAPS-EKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFK------ 506
C+LFG LI+ T PS + VS + H+ + +++D K D +K +
Sbjct: 626 CKLFGFSLISGPTLPEPSLSQRNVSEAADQMHLTAHQQRTSENDEKLDHSKGSRPVDDIV 685
Query: 507 ----EKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDEL 562
++ Q+ K+ Q+K S RS TKV +G+A+GR++DLT GYD L+ EL
Sbjct: 686 VDDQDRPLRTSQLHTKDVQAK-PLSGSARSCTKVHKKGIALGRSVDLTKYSGYDELVAEL 744
Query: 563 EEMFDIKGQL-HTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPG 621
+++F+ G+L T+ W IV+TD+EGDMMLVGDDPW EFC MV++I+I ++++KMSPG
Sbjct: 745 DQLFEFGGELLSTKKDWLIVFTDNEGDMMLVGDDPWQEFCAMVRKIYIYPKEEIQKMSPG 804
Query: 622 S 622
+
Sbjct: 805 T 805
>gi|356516493|ref|XP_003526928.1| PREDICTED: auxin response factor 2-like [Glycine max]
Length = 843
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 216/328 (65%), Positives = 264/328 (80%), Gaps = 6/328 (1%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE-PT 59
+EQ+EASTNQ +Q +P++ LP KILCRV+N+ L AE +TDEV+AQ+TLLPEP+Q+E
Sbjct: 66 IEQVEASTNQVADQHMPVYDLPPKILCRVINVQLKAEPDTDEVFAQVTLLPEPNQDENAV 125
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
+P P PR VHSF K LTASDTSTHGGFSVLR+HA ECLPPLDM++ PTQELVAK
Sbjct: 126 EKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELVAK 185
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH EWRFKHIFRGQPRRHLL +GWS FV+SKRLVAGD F+FLRGENGEL VGVR R
Sbjct: 186 DLHANEWRFKHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 245
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNK 237
QQ ++PSSVISS SMHLGVLATA HA+ T T+F VYYKPRTS +FI+ ++Y+E++ N
Sbjct: 246 QQGNVPSSVISSHSMHLGVLATAWHAILTGTIFTVYYKPRTSPAEFIVPYDQYMESLKNS 305
Query: 238 FAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRV 296
+++GMR+KMRFEGE++PE+RF+GTVVG+ED P W+DSKWR LKV+WDE ++ RP+RV
Sbjct: 306 YSIGMRFKMRFEGEEAPEQRFTGTVVGIEDSDPKRWRDSKWRCLKVRWDETSNTPRPERV 365
Query: 297 SPWEIEPFVASATPNLVQPVLAKNKRPR 324
SPW+IEP A A P L + + KRPR
Sbjct: 366 SPWKIEP--ALAPPALNPLSMPRPKRPR 391
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 106/180 (58%), Gaps = 11/180 (6%)
Query: 454 CRLFGIELINHATSSAPS-EKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQ 512
C+LFG LI+ PS + VS + H+ + +++D KSD +K +
Sbjct: 626 CKLFGFSLISGPIVPEPSLSQRNVSEPAGQMHLTAHQQRTSENDEKSDHSKGSRPVDDLV 685
Query: 513 VQVSPKESQSKQS---------CLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELE 563
V + Q+ QS S RS TKV +G+A+GR++DLT GYD L+ EL+
Sbjct: 686 VDDHDRPLQTSQSHTKDVQAKPLSGSARSCTKVHKKGIALGRSVDLTKYSGYDELVAELD 745
Query: 564 EMFDIKGQL-HTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 622
++F+ G+L T+ W IVYTD+EGDMMLVGDDPW EFC MV +I+I ++++KMSPG+
Sbjct: 746 QLFEFGGELLSTKKDWLIVYTDNEGDMMLVGDDPWQEFCAMVCKIYIYPKEEIQKMSPGT 805
>gi|301793211|emb|CBA11996.1| putative auxin response factor 2 [Cabomba aquatica]
Length = 782
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 231/441 (52%), Positives = 305/441 (69%), Gaps = 31/441 (7%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEP-- 58
+EQ+EASTNQ +Q++P+++LPSKILC V+NI L AE +TDEV+AQ+TL+PE +Q+E
Sbjct: 85 IEQVEASTNQVSDQQMPIYKLPSKILCTVINIDLKAEPDTDEVFAQMTLVPESTQDEKDI 144
Query: 59 --TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQEL 116
TP P + RP VHSF K LTASDTSTHGGFSVLR+HA ECLPPLDM + P+QEL
Sbjct: 145 IIETPPPLQS---RPHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMCRQPPSQEL 201
Query: 117 VAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRC 176
VAKDLHG EW F+HIFRGQPRRHLL +GWS FV+SKRLVAGD F+FLRGENGEL VGVR
Sbjct: 202 VAKDLHGKEWSFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRR 261
Query: 177 LARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV 234
RQQS++PSSVISS SMHLGVLATASHA+ T TMF VYYKPRT S+FI+ +Y+E++
Sbjct: 262 AMRQQSNVPSSVISSHSMHLGVLATASHAIQTGTMFTVYYKPRTSPSEFIVPFAQYVESI 321
Query: 235 NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRP 293
+++GMR+KMRFEGE++PE+RF+GT++G+ D S W +SKWR LKV+WDE S+ RP
Sbjct: 322 KKNYSIGMRFKMRFEGEEAPEQRFTGTIIGIGDVDSTRWPESKWRCLKVRWDEQTSVPRP 381
Query: 294 DRVSPWEIEPFVASATPNLVQPV-LAKNKRPRLSM-----------EVPP-LDLPSAASA 340
D++SPW+IEP +A P + P+ +++ KRPR ++ VPP + + +AA
Sbjct: 382 DKISPWQIEPALA---PIALNPLPVSRTKRPRPNILPTSPDVSALTRVPPKVAVDAAAQD 438
Query: 341 PWSARLAQSHNLTQL----SVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTS 396
+R+ Q +T L + +E + V H H +++ + + S+ W+
Sbjct: 439 HGFSRVLQGQEITTLRGAFAECSESENAQKPVGQSHLHDKERVDASSLRKMASEC-WMPL 497
Query: 397 PRVKFSQQLFQEAIDDNKNIS 417
R + S DD S
Sbjct: 498 VRPEHSCSGLHGPTDDAYGFS 518
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 105/205 (51%), Gaps = 40/205 (19%)
Query: 426 STPHPSKPNNDTL-----LEQVETGR------------KTETGTSCRLFGIELIN----H 464
STP P +P N + L++ +GR K++ +C+LFGI L + H
Sbjct: 584 STPVPQQPTNWLISSTPSLKESASGRVHTDHYAQPEPVKSKGSGNCKLFGISLKSSSQQH 643
Query: 465 ATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKE-----------KKQEQV 513
TSS+ ++ + E A +SD S+ K K K + V
Sbjct: 644 ETSSSHAK------VADEAAQTFCKPQALESDRLSEPLKCAKSLDTLCSDSDEVKTNQPV 697
Query: 514 QVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH 573
Q +++ +K C +S RS TKVQ QG A+GR++DL Y+ LI EL+ MF+ +G+L
Sbjct: 698 QQHSRDAHNKPLC-SSTRSCTKVQKQGSALGRSVDLAKFTSYEELITELDHMFEFQGELM 756
Query: 574 TRTK-WEIVYTDDEGDMMLVGDDPW 597
K W +VYTD+EGDMMLVGDDPW
Sbjct: 757 NSNKNWLVVYTDNEGDMMLVGDDPW 781
>gi|356527524|ref|XP_003532359.1| PREDICTED: auxin response factor 2-like [Glycine max]
Length = 851
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 213/329 (64%), Positives = 263/329 (79%), Gaps = 8/329 (2%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE-PT 59
+EQ+EASTNQ Q +P++ LP KILCRV+N+ L AE +TDEV+AQ+TLLPEP+Q+E
Sbjct: 78 IEQVEASTNQVAEQHMPVYDLPPKILCRVINVMLKAEPDTDEVFAQVTLLPEPNQDENAV 137
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
+ PA PR VHSF K LTASDTSTHGGFSVLR+HA ECLPPLDM++ PTQELVAK
Sbjct: 138 EKEGPPAPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELVAK 197
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH EWRF+HIFRGQPRRHLL +GWS FV+SKRLVAGD F+FLRGENGEL VGVR R
Sbjct: 198 DLHANEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 257
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNK 237
QQ ++PSSVISS SMHLGVLATA HA+ T TMF VYYKPRTS +FI+ ++Y+E++ N
Sbjct: 258 QQGNVPSSVISSHSMHLGVLATAWHAILTGTMFTVYYKPRTSPAEFIVPYDQYMESLKNN 317
Query: 238 FAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRV 296
+ +GMR+KMRFEGE++PE+RF+GT+VG+ED + W SKWRSLKV+WDE ++I RP+RV
Sbjct: 318 YTIGMRFKMRFEGEEAPEQRFTGTIVGIEDADTKRWPKSKWRSLKVRWDETSNIPRPERV 377
Query: 297 SPWEIEPFVASATPNLVQPV-LAKNKRPR 324
S W+IEP +A P + P+ + + KRPR
Sbjct: 378 SQWKIEPALA---PLALNPLPMPRPKRPR 403
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/208 (37%), Positives = 119/208 (57%), Gaps = 19/208 (9%)
Query: 433 PNNDTLLEQVETGRKTETG----TSCRLFGIELINH---ATSSAPSEKVPVSSLTTEGHI 485
P + LL + +G+ E + C+LFGI L++ A+ + S++ S H
Sbjct: 613 PRSRELLSKPISGKPCEVSKLKDSDCKLFGISLLSSRPIASEPSLSQRNVTSESVGHMHT 672
Query: 486 ISTISAAADSDGKSDIAKEFK----------EKKQEQVQVSPKESQSKQSCLTSNRSRTK 535
S A ++D KS+ ++ K EK + Q K+ Q+K S S RS TK
Sbjct: 673 ASHHQRAIENDQKSEHSRGSKPADGLLIDDHEKVLQTSQPHLKDVQAK-SHSGSARSCTK 731
Query: 536 VQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGD 594
V +G+A+GR++DLT Y LI EL+++F+ G+L + K W IVYTD+EGDMMLVGD
Sbjct: 732 VHKKGIALGRSVDLTKFSDYGELITELDQLFEFGGELTSPQKDWLIVYTDNEGDMMLVGD 791
Query: 595 DPWHEFCNMVKRIFICSSQDVKKMSPGS 622
DPW EF MV++I+I ++++KMSPG+
Sbjct: 792 DPWQEFVAMVRKIYIYPKEEIQKMSPGT 819
>gi|357152133|ref|XP_003576020.1| PREDICTED: auxin response factor 23-like [Brachypodium distachyon]
Length = 882
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 219/369 (59%), Positives = 270/369 (73%), Gaps = 8/369 (2%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
+EQ+EASTNQ QR+ L+ LP KILC V+N+ L AE +TDEVYAQ+TLLPE Q E
Sbjct: 97 IEQVEASTNQVAEQRMQLYNLPWKILCEVMNVELKAESDTDEVYAQLTLLPESKQQEENA 156
Query: 61 P----DPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQE 115
P+ +P RP+VHSF K LTASDTSTHGGFSVLR+HA ECLPPLDM++ PTQE
Sbjct: 157 STEEVSAAPSAAPVRPRVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQE 216
Query: 116 LVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR 175
L AKDLHG EWRF+HIFRGQPRRHLL +GWS FV++KRLVAGD F+FLRGENGEL VGVR
Sbjct: 217 LTAKDLHGAEWRFRHIFRGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVR 276
Query: 176 CLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEA 233
RQQ+++PSSVISS SMHLGVLATA HAV T TMF VYYKPRTS +F++ ++Y+E+
Sbjct: 277 RAMRQQTNVPSSVISSHSMHLGVLATAWHAVNTGTMFTVYYKPRTSPAEFVVPYDRYMES 336
Query: 234 VNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITR 292
+ +++GMR+KMRFEGE++PE+RF+GT+VG+ D P W +SKWRSLKV+WDE +SI R
Sbjct: 337 LKRNYSIGMRFKMRFEGEEAPEQRFTGTIVGMGDSDPAGWAESKWRSLKVRWDEASSIPR 396
Query: 293 PDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNL 352
P+RVSPW+IEP V+ N + K RP + + AP A Q H L
Sbjct: 397 PERVSPWQIEPAVSPPPINPLPVPRTKRPRPNVIASTTDSSTQAKEVAPKVAAETQQHAL 456
Query: 353 TQLSVTAED 361
+ T E+
Sbjct: 457 QRAFQTQEN 465
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 107/188 (56%), Gaps = 19/188 (10%)
Query: 451 GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISA------AADSDGKSDIAKE 504
G SC+LFGI L + A S P + P S+ +G + SA A + + D +K
Sbjct: 662 GASCKLFGIHLDSPAKSE-PLKSPP--SVAYDGMPHTPGSAELCRMDATEPEKCYDPSKT 718
Query: 505 FKEKKQEQVQVSPKE---------SQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGY 555
K P++ + S +S S RS KV QG+A+GR++DLT GY
Sbjct: 719 PKPLDAPYADSVPEKHLSCQQASRNASGKSRGGSARSCKKVHKQGIALGRSVDLTKFNGY 778
Query: 556 DHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 614
L+ EL++MFD G L + K W +VYTD EGDMMLVGDDPW EFCN+V +IFI + ++
Sbjct: 779 MELVSELDDMFDFNGDLKSSNKEWMVVYTDHEGDMMLVGDDPWSEFCNIVHKIFIYTREE 838
Query: 615 VKKMSPGS 622
V++M+PG+
Sbjct: 839 VQRMAPGA 846
>gi|357126622|ref|XP_003564986.1| PREDICTED: auxin response factor 4-like [Brachypodium distachyon]
Length = 814
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 214/344 (62%), Positives = 269/344 (78%), Gaps = 12/344 (3%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE--- 57
+EQ+EAS NQ + ++ L+ LPSK+LC V+N+ L AE +TDEVYAQ+ L+PE QNE
Sbjct: 49 IEQVEASMNQVADNQMRLYDLPSKLLCSVINVELKAEADTDEVYAQVMLIPENDQNEMAV 108
Query: 58 PTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELV 117
+ +P V SF K LTASDTSTHGGFSVLR+HA ECLPPLDM QS PTQELV
Sbjct: 109 EKSSSKAATTLAKPAVRSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTQSPPTQELV 168
Query: 118 AKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCL 177
AKDLHG +WRF+HIFRGQPRRHLL +GWS FV+SKRLVAGD F+FLRGE+GEL VGVR
Sbjct: 169 AKDLHGMDWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGESGELRVGVRRA 228
Query: 178 ARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVN 235
RQ S++PSSVISS SMHLGVLATA HA+ T++MF VYYKPRT S+FII ++Y+E+V
Sbjct: 229 MRQLSNVPSSVISSHSMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVK 288
Query: 236 NKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDR 295
N +++G+R++MRFEGE++PE+RF+GT++G E+ P W +S WRSLKV+WDEP++I RPDR
Sbjct: 289 NNYSIGVRFRMRFEGEEAPEQRFTGTIIGSENLDPLWPESSWRSLKVRWDEPSTIPRPDR 348
Query: 296 VSPWEIEPFVASATPNLVQPV-LAKNKRPRLSMEVPPLDLPSAA 338
VSPW+IEP AS+ P V P+ L++ KRPR + VPP S+A
Sbjct: 349 VSPWKIEP--ASSPP--VNPLPLSRVKRPRPN--VPPASPESSA 386
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 104/182 (57%), Gaps = 9/182 (4%)
Query: 447 KTETGTSCRLFGIEL------INHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSD 500
KT G+ ++FG ++ NH +S + P + A D +
Sbjct: 601 KTREGSGFKIFGFKVDTASAPTNHLSSPMAATHEPALQTQPSASLNQLQHAQTDCFPEVS 660
Query: 501 IAKEFKEKKQEQVQVSPKESQSKQSCL--TSNRSRTKVQMQGVAVGRALDLTTLVGYDHL 558
++ + ++ +Q +P+ S+ QS S RS TKV QGVA+GR++DL+ YD L
Sbjct: 661 VSTGGTNENEKSIQQAPQSSKDVQSKSHGASTRSCTKVHKQGVALGRSVDLSKFSDYDEL 720
Query: 559 IDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKK 617
EL++MF+ G+L + K W+IVYTD+E DMMLVGDDPW EFC++V++I I + ++V+K
Sbjct: 721 KAELDKMFEFDGELMSSNKNWQIVYTDNEDDMMLVGDDPWGEFCSIVRKICIYTKEEVQK 780
Query: 618 MS 619
M+
Sbjct: 781 MN 782
>gi|357520589|ref|XP_003630583.1| Auxin response factor-like protein [Medicago truncatula]
gi|355524605|gb|AET05059.1| Auxin response factor-like protein [Medicago truncatula]
Length = 821
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 214/332 (64%), Positives = 265/332 (79%), Gaps = 8/332 (2%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE-PT 59
+EQ+EASTNQ Q +P++ L KILCRV+N+ L AE +TDEV+AQ+TL+PEP+Q+E
Sbjct: 74 IEQVEASTNQASEQHMPVYDLRPKILCRVINVMLKAEPDTDEVFAQVTLVPEPNQDENAV 133
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
+ PA PR VHSF K LTASDTSTHGGFSVLR+HA ECLPPLDM++ PTQELVAK
Sbjct: 134 EKEAPPAPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELVAK 193
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLHG EWRF+HIFRGQPRRHLL +GWS FV+SKRLVAGD F+FLRGENGEL VGVR R
Sbjct: 194 DLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 253
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNK 237
QQ ++PSSVISS SMHLGVLATA HAV T TMF VYYKPRTS +FI+ ++Y+E++ N
Sbjct: 254 QQGNVPSSVISSHSMHLGVLATAWHAVLTGTMFTVYYKPRTSPAEFIVPYDQYMESLKNN 313
Query: 238 FAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRV 296
+ +GMR+KMRFEGE++PE+RF+GT+VG+ED S W SKWR LKV+WDE ++I RP+RV
Sbjct: 314 YTIGMRFKMRFEGEEAPEQRFTGTIVGIEDSDSKRWPTSKWRCLKVRWDETSNIPRPERV 373
Query: 297 SPWEIEPFVASATPNLVQPV-LAKNKRPRLSM 327
SPW+IEP +A P + P+ + + KRPR ++
Sbjct: 374 SPWKIEPALA---PPALNPLPMPRPKRPRANV 402
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 77/216 (35%), Positives = 128/216 (59%), Gaps = 15/216 (6%)
Query: 420 PAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSL 479
P + + +PH + + + ++ K + + C+LFG L++ T PS ++
Sbjct: 577 PPPTQYESPHSRELSQKQMSAKISEAAKPKD-SDCKLFGFSLLSSPTMLEPSLSQRNATS 635
Query: 480 TTEGHI-ISTISAAADSDGKSDIAKEFK--------EKKQEQVQVSP---KESQSKQSCL 527
T H+ IS+ ++D KS+ +K K ++ ++Q+Q S K+ Q K
Sbjct: 636 ETSSHMQISSQHHTFENDQKSEHSKSSKPADKLVIVDEHEKQLQTSQPHVKDVQLKPQS- 694
Query: 528 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDE 586
S RS TKV +G+A+GR++DLT YD L EL+++F+ +G+L + K W +V+TD+E
Sbjct: 695 GSARSCTKVHKKGIALGRSVDLTKFSDYDELTAELDQLFEFRGELISPQKDWLVVFTDNE 754
Query: 587 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 622
GDMMLVGDDPW EFC+MV++I+I ++++KMSPG+
Sbjct: 755 GDMMLVGDDPWQEFCSMVRKIYIYPKEEIQKMSPGT 790
>gi|357520591|ref|XP_003630584.1| Auxin response factor-like protein [Medicago truncatula]
gi|355524606|gb|AET05060.1| Auxin response factor-like protein [Medicago truncatula]
Length = 715
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 215/331 (64%), Positives = 263/331 (79%), Gaps = 6/331 (1%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE-PT 59
+EQ+EASTNQ Q +P++ L KILCRV+N+ L AE +TDEV+AQ+TL+PEP+Q+E
Sbjct: 74 IEQVEASTNQASEQHMPVYDLRPKILCRVINVMLKAEPDTDEVFAQVTLVPEPNQDENAV 133
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
+ PA PR VHSF K LTASDTSTHGGFSVLR+HA ECLPPLDM++ PTQELVAK
Sbjct: 134 EKEAPPAPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELVAK 193
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLHG EWRF+HIFRGQPRRHLL +GWS FV+SKRLVAGD F+FLRGENGEL VGVR R
Sbjct: 194 DLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 253
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNK 237
QQ ++PSSVISS SMHLGVLATA HAV T TMF VYYKPRTS +FI+ ++Y+E++ N
Sbjct: 254 QQGNVPSSVISSHSMHLGVLATAWHAVLTGTMFTVYYKPRTSPAEFIVPYDQYMESLKNN 313
Query: 238 FAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRV 296
+ +GMR+KMRFEGE++PE+RF+GT+VG+ED S W SKWR LKV+WDE ++I RP+RV
Sbjct: 314 YTIGMRFKMRFEGEEAPEQRFTGTIVGIEDSDSKRWPTSKWRCLKVRWDETSNIPRPERV 373
Query: 297 SPWEIEPFVASATPNLVQPVLAKNKRPRLSM 327
SPW+IEP A A P L + + KRPR ++
Sbjct: 374 SPWKIEP--ALAPPALNPLPMPRPKRPRANV 402
>gi|357520593|ref|XP_003630585.1| Auxin response factor-like protein [Medicago truncatula]
gi|355524607|gb|AET05061.1| Auxin response factor-like protein [Medicago truncatula]
Length = 766
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 215/331 (64%), Positives = 263/331 (79%), Gaps = 6/331 (1%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE-PT 59
+EQ+EASTNQ Q +P++ L KILCRV+N+ L AE +TDEV+AQ+TL+PEP+Q+E
Sbjct: 74 IEQVEASTNQASEQHMPVYDLRPKILCRVINVMLKAEPDTDEVFAQVTLVPEPNQDENAV 133
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
+ PA PR VHSF K LTASDTSTHGGFSVLR+HA ECLPPLDM++ PTQELVAK
Sbjct: 134 EKEAPPAPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELVAK 193
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLHG EWRF+HIFRGQPRRHLL +GWS FV+SKRLVAGD F+FLRGENGEL VGVR R
Sbjct: 194 DLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 253
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNK 237
QQ ++PSSVISS SMHLGVLATA HAV T TMF VYYKPRTS +FI+ ++Y+E++ N
Sbjct: 254 QQGNVPSSVISSHSMHLGVLATAWHAVLTGTMFTVYYKPRTSPAEFIVPYDQYMESLKNN 313
Query: 238 FAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRV 296
+ +GMR+KMRFEGE++PE+RF+GT+VG+ED S W SKWR LKV+WDE ++I RP+RV
Sbjct: 314 YTIGMRFKMRFEGEEAPEQRFTGTIVGIEDSDSKRWPTSKWRCLKVRWDETSNIPRPERV 373
Query: 297 SPWEIEPFVASATPNLVQPVLAKNKRPRLSM 327
SPW+IEP A A P L + + KRPR ++
Sbjct: 374 SPWKIEP--ALAPPALNPLPMPRPKRPRANV 402
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 104/192 (54%), Gaps = 15/192 (7%)
Query: 420 PAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSL 479
P + + +PH + + + ++ K + + C+LFG L++ T PS ++
Sbjct: 577 PPPTQYESPHSRELSQKQMSAKISEAAKPKD-SDCKLFGFSLLSSPTMLEPSLSQRNATS 635
Query: 480 TTEGHI-ISTISAAADSDGKSDIAKEFK-----------EKKQEQVQVSPKESQSKQSCL 527
T H+ IS+ ++D KS+ +K K EK+ + Q K+ Q K
Sbjct: 636 ETSSHMQISSQHHTFENDQKSEHSKSSKPADKLVIVDEHEKQLQTSQPHVKDVQLKPQS- 694
Query: 528 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDE 586
S RS TKV +G+A+GR++DLT YD L EL+++F+ +G+L + K W +V+TD+E
Sbjct: 695 GSARSCTKVHKKGIALGRSVDLTKFSDYDELTAELDQLFEFRGELISPQKDWLVVFTDNE 754
Query: 587 GDMMLVGDDPWH 598
GDMMLVGDDPW
Sbjct: 755 GDMMLVGDDPWQ 766
>gi|122207373|sp|Q2R3F5.2|ARFW_ORYSJ RecName: Full=Auxin response factor 23; AltName: Full=OsARF1
gi|108864435|gb|ABA93992.2| Auxin response factor 2, putative, expressed [Oryza sativa Japonica
Group]
gi|222616062|gb|EEE52194.1| hypothetical protein OsJ_34072 [Oryza sativa Japonica Group]
Length = 853
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 207/312 (66%), Positives = 250/312 (80%), Gaps = 9/312 (2%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPT- 59
+EQ+EASTNQ QR+ L+ LP KILC V+N+ L AE +TDEVYAQ+TLLPE Q E
Sbjct: 68 IEQVEASTNQVGEQRMQLYNLPWKILCEVMNVELKAEPDTDEVYAQLTLLPESKQQEDNG 127
Query: 60 -----TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQ 114
P A RP+VHSF K LTASDTSTHGGFSVLR+HA ECLPPLDM++ PTQ
Sbjct: 128 STEEEVPSAPAAGHVRPRVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQ 187
Query: 115 ELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGV 174
ELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV++KRLVAGD F+FLRGENGEL VGV
Sbjct: 188 ELVAKDLHGVEWRFRHIFRGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGV 247
Query: 175 RCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLE 232
R RQQ+++PSSVISS SMHLGVLATA HAV T TMF VYYKPRTS +F++ ++Y+E
Sbjct: 248 RRAMRQQTNVPSSVISSHSMHLGVLATAWHAVNTGTMFTVYYKPRTSPAEFVVPYDRYME 307
Query: 233 AVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASIT 291
++ +++GMR+KMRFEGE++PE+RF+GT+VG+ D P W +SKWRSLKV+WDE +SI
Sbjct: 308 SLKQNYSIGMRFKMRFEGEEAPEQRFTGTIVGMGDSDPAGWPESKWRSLKVRWDEASSIP 367
Query: 292 RPDRVSPWEIEP 303
RP+RVSPW+IEP
Sbjct: 368 RPERVSPWQIEP 379
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 110/184 (59%), Gaps = 12/184 (6%)
Query: 451 GTSCRLFGIELINHATS---SAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKE 507
G SC+LFGI L + A S +PS V + T G + + SD +K K
Sbjct: 634 GASCKLFGIHLDSPAKSEPLKSPSSVVYDGTPQTPGATEWRRPDVTEVEKCSDPSKAMKP 693
Query: 508 KKQEQVQVSPKESQSKQ-----SCLT---SNRSRTKVQMQGVAVGRALDLTTLVGYDHLI 559
Q P++ S+Q SC + S RS KV QG+A+GR++DLT GY+ LI
Sbjct: 694 LDTPQPDSVPEKPSSQQASRNMSCKSQGVSTRSCKKVHKQGIALGRSVDLTKFNGYEELI 753
Query: 560 DELEEMFDIKGQLHT-RTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 618
EL++MFD G+L + +W +VYTD+EGDMMLVGDDPW EFC+MV +IFI + ++V++M
Sbjct: 754 AELDDMFDFNGELKGPKKEWMVVYTDNEGDMMLVGDDPWIEFCDMVHKIFIYTREEVQRM 813
Query: 619 SPGS 622
+PG+
Sbjct: 814 NPGT 817
>gi|115485689|ref|NP_001067988.1| Os11g0523800 [Oryza sativa Japonica Group]
gi|108864434|gb|ABG22498.1| Auxin response factor 2, putative, expressed [Oryza sativa Japonica
Group]
gi|108864436|gb|ABG22499.1| Auxin response factor 2, putative, expressed [Oryza sativa Japonica
Group]
gi|113645210|dbj|BAF28351.1| Os11g0523800 [Oryza sativa Japonica Group]
Length = 852
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 207/312 (66%), Positives = 250/312 (80%), Gaps = 9/312 (2%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPT- 59
+EQ+EASTNQ QR+ L+ LP KILC V+N+ L AE +TDEVYAQ+TLLPE Q E
Sbjct: 67 IEQVEASTNQVGEQRMQLYNLPWKILCEVMNVELKAEPDTDEVYAQLTLLPESKQQEDNG 126
Query: 60 -----TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQ 114
P A RP+VHSF K LTASDTSTHGGFSVLR+HA ECLPPLDM++ PTQ
Sbjct: 127 STEEEVPSAPAAGHVRPRVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQ 186
Query: 115 ELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGV 174
ELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV++KRLVAGD F+FLRGENGEL VGV
Sbjct: 187 ELVAKDLHGVEWRFRHIFRGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGV 246
Query: 175 RCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLE 232
R RQQ+++PSSVISS SMHLGVLATA HAV T TMF VYYKPRTS +F++ ++Y+E
Sbjct: 247 RRAMRQQTNVPSSVISSHSMHLGVLATAWHAVNTGTMFTVYYKPRTSPAEFVVPYDRYME 306
Query: 233 AVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASIT 291
++ +++GMR+KMRFEGE++PE+RF+GT+VG+ D P W +SKWRSLKV+WDE +SI
Sbjct: 307 SLKQNYSIGMRFKMRFEGEEAPEQRFTGTIVGMGDSDPAGWPESKWRSLKVRWDEASSIP 366
Query: 292 RPDRVSPWEIEP 303
RP+RVSPW+IEP
Sbjct: 367 RPERVSPWQIEP 378
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 110/184 (59%), Gaps = 12/184 (6%)
Query: 451 GTSCRLFGIELINHATS---SAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKE 507
G SC+LFGI L + A S +PS V + T G + + SD +K K
Sbjct: 633 GASCKLFGIHLDSPAKSEPLKSPSSVVYDGTPQTPGATEWRRPDVTEVEKCSDPSKAMKP 692
Query: 508 KKQEQVQVSPKESQSKQ-----SCLT---SNRSRTKVQMQGVAVGRALDLTTLVGYDHLI 559
Q P++ S+Q SC + S RS KV QG+A+GR++DLT GY+ LI
Sbjct: 693 LDTPQPDSVPEKPSSQQASRNMSCKSQGVSTRSCKKVHKQGIALGRSVDLTKFNGYEELI 752
Query: 560 DELEEMFDIKGQLHT-RTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 618
EL++MFD G+L + +W +VYTD+EGDMMLVGDDPW EFC+MV +IFI + ++V++M
Sbjct: 753 AELDDMFDFNGELKGPKKEWMVVYTDNEGDMMLVGDDPWIEFCDMVHKIFIYTREEVQRM 812
Query: 619 SPGS 622
+PG+
Sbjct: 813 NPGT 816
>gi|224136320|ref|XP_002322300.1| predicted protein [Populus trichocarpa]
gi|222869296|gb|EEF06427.1| predicted protein [Populus trichocarpa]
Length = 852
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 208/306 (67%), Positives = 255/306 (83%), Gaps = 4/306 (1%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
+EQ+EASTNQ +Q++PL+ L KILCRVVN+ L AE +TDEV+AQ+TLLPE +Q+E
Sbjct: 82 IEQVEASTNQVADQQMPLYNLLPKILCRVVNVQLKAEPDTDEVFAQVTLLPEHNQDESVL 141
Query: 61 -PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
+P P PR VHSF K LTASDTSTHGGFSVLR+HA ECLPPLDM++ PTQELVAK
Sbjct: 142 EKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAK 201
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLHG EWRF+HIFRGQPRRHLL +GWS FV+SKRLVAGD F+FLRGENGEL VGVR R
Sbjct: 202 DLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 261
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNK 237
QQ ++PSSVISS SMHLGVLATA HAV+T T+F VYYKPRTS +FI+ ++Y+E+V N
Sbjct: 262 QQGNVPSSVISSHSMHLGVLATAWHAVSTGTLFTVYYKPRTSPAEFIVPFDQYMESVKNN 321
Query: 238 FAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRV 296
+++GMR+KMRFEGE++PE+RF+GT+VG+ED P WK+SKWR LKV+WDE +++ RP+RV
Sbjct: 322 YSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPGRWKNSKWRCLKVRWDETSTMPRPERV 381
Query: 297 SPWEIE 302
SPW+IE
Sbjct: 382 SPWKIE 387
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/217 (36%), Positives = 118/217 (54%), Gaps = 29/217 (13%)
Query: 437 TLLEQVETGRKTETGTSCRLFGIEL------INHATSSAPSEKVPVSSLTTEGHIISTIS 490
L+++ ++G+ E +C+LFGI L A + + P+S + H ++
Sbjct: 626 VLMQEHDSGKSLEG--NCKLFGIPLKISKPVAPEAAGTTITMNEPLSHIQPVSHQLTF-- 681
Query: 491 AAADSDGKSDIAKEFK-------EKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAV 543
+SD KS+ +K K EK + + K++ K S RS TKV QG+A+
Sbjct: 682 ---ESDQKSEQSKGSKMTDENENEKPFQAGHLRTKDNHGKAQN-GSTRSCTKVHKQGIAL 737
Query: 544 GRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCN 602
GR++DL YD LI EL+ +F+ G+L K W IVYTDDE DMMLVGDDPW EF
Sbjct: 738 GRSVDLAKFNNYDELIAELDRLFEFNGELMAPQKNWLIVYTDDEDDMMLVGDDPWQEFVG 797
Query: 603 MVKRIFICSSQDVKKMSPGS------KLPMFSIEGED 633
MV++I I + ++ +K+ PG+ + PM +EGED
Sbjct: 798 MVRKIVIYTKEEAQKIKPGALNSKGVENPM-DMEGED 833
>gi|23893346|emb|CAC83756.1| auxin response factor 1 [Oryza sativa Japonica Group]
Length = 836
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 207/312 (66%), Positives = 250/312 (80%), Gaps = 9/312 (2%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPT- 59
+EQ+EASTNQ QR+ L+ LP KILC V+N+ L AE +TDEVYAQ+TLLPE Q E
Sbjct: 51 IEQVEASTNQVGEQRMQLYNLPWKILCEVMNVELKAEPDTDEVYAQLTLLPESKQQEDNG 110
Query: 60 -----TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQ 114
P A RP+VHSF K LTASDTSTHGGFSVLR+HA ECLPPLDM++ PTQ
Sbjct: 111 STEEEVPSAPAAGHVRPRVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQ 170
Query: 115 ELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGV 174
ELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV++KRLVAGD F+FLRGENGEL VGV
Sbjct: 171 ELVAKDLHGVEWRFRHIFRGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGV 230
Query: 175 RCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLE 232
R RQQ+++PSSVISS SMHLGVLATA HAV T TMF VYYKPRTS +F++ ++Y+E
Sbjct: 231 RRAMRQQTNVPSSVISSHSMHLGVLATAWHAVNTGTMFTVYYKPRTSPAEFVVPYDRYME 290
Query: 233 AVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASIT 291
++ +++GMR+KMRFEGE++PE+RF+GT+VG+ D P W +SKWRSLKV+WDE +SI
Sbjct: 291 SLKQNYSIGMRFKMRFEGEEAPEQRFTGTIVGMGDSDPAGWPESKWRSLKVRWDEASSIP 350
Query: 292 RPDRVSPWEIEP 303
RP+RVSPW+IEP
Sbjct: 351 RPERVSPWQIEP 362
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 110/184 (59%), Gaps = 12/184 (6%)
Query: 451 GTSCRLFGIELINHATS---SAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKE 507
G SC+LFGI L + A S +PS V + T G + + SD +K K
Sbjct: 617 GASCKLFGIHLDSPAKSEPLKSPSSVVYDGTPQTPGATEWRRPDVTEVEKCSDPSKAMKP 676
Query: 508 KKQEQVQVSPKESQSKQ-----SCLT---SNRSRTKVQMQGVAVGRALDLTTLVGYDHLI 559
Q P++ S+Q SC + S RS KV QG+A+GR++DLT GY+ LI
Sbjct: 677 LDTPQPDSVPEKPSSQQASRNMSCKSQGVSTRSCKKVHKQGIALGRSVDLTKFNGYEELI 736
Query: 560 DELEEMFDIKGQLHT-RTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 618
EL++MFD G+L + +W +VYTD+EGDMMLVGDDPW EFC+MV +IFI + ++V++M
Sbjct: 737 AELDDMFDFNGELKGPKKEWMVVYTDNEGDMMLVGDDPWIEFCDMVHKIFIYTREEVQRM 796
Query: 619 SPGS 622
+PG+
Sbjct: 797 NPGT 800
>gi|320117915|gb|ADW11246.1| putative auxin response factor [Gossypium hirsutum]
Length = 672
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 218/327 (66%), Positives = 264/327 (80%), Gaps = 4/327 (1%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
MEQLEAS +Q L ++P F LPSKILC+V ++ AE +TDEVYAQITL+PE Q+E +
Sbjct: 49 MEQLEASMHQGLEHQMPSFDLPSKILCKVASVQRKAEPDTDEVYAQITLVPEVDQSEVMS 108
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
PD + R VHSF K LTASDTSTHGGFSVLR+HA +CLPPLDM Q P QEL+A D
Sbjct: 109 PDDPLQEPERCIVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELIATD 168
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
LHG EW F+HI RGQPRRHLLTTGWS FV+SK+LVAGD +FLRG NG+L VGVR L RQ
Sbjct: 169 LHGNEWHFRHIRRGQPRRHLLTTGWSVFVSSKKLVAGDALIFLRGANGDLRVGVRRLMRQ 228
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKF 238
Q++MPSSVISS S+ LGVLATAS+A++T++MF ++YKPRTS +FI+S+NKYLEA ++K
Sbjct: 229 QANMPSSVISSHSIILGVLATASYALSTRSMFSIFYKPRTSLSEFIVSVNKYLEARSHKL 288
Query: 239 AVGMRYKMRFEGEDSPERRFSGTVVGVE-DFSPHWKDSKWRSLKVQWDEPASITRPDRVS 297
+VGMR+KMRFEGE+ PERRFSGT+VGVE D S W DS+WRSLKVQWDEP+SI RPDRVS
Sbjct: 289 SVGMRFKMRFEGEEVPERRFSGTIVGVEADKSSGWADSEWRSLKVQWDEPSSIIRPDRVS 348
Query: 298 PWEIEPFVASATPNLVQPVLAKNKRPR 324
PWE+EP VA++ ++ QP +NKR R
Sbjct: 349 PWELEPLVATSNSSISQPA-QRNKRAR 374
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/189 (48%), Positives = 124/189 (65%), Gaps = 17/189 (8%)
Query: 446 RKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTI-SAAADSDGKSDIAKE 504
RK TG CRLFGI+LI++ E P+++++ G + S A+SD +SD A
Sbjct: 462 RKQGTGNGCRLFGIQLIDNINME---ENSPLATISGTGVNDQPLHSLDANSDQQSDPANL 518
Query: 505 FKEK------KQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHL 558
+ + E+ SP+ESQSKQ RS TKV MQG+AVGRA+DLT Y+ L
Sbjct: 519 NQSDLPSISCEPEKCLRSPQESQSKQI-----RSCTKVHMQGMAVGRAVDLTRFDCYEDL 573
Query: 559 IDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKK 617
+ +LE MFDIKGQL TK W++VYTDDE DMM+VGDDPW+EFC+MV++I I +S++V+K
Sbjct: 574 LKKLEYMFDIKGQLCGSTKNWQVVYTDDEDDMMMVGDDPWNEFCSMVRKI-IYTSEEVRK 632
Query: 618 MSPGSKLPM 626
+SP K P+
Sbjct: 633 LSPKIKAPV 641
>gi|158513335|sp|A2ZET6.1|ARFW_ORYSI RecName: Full=Auxin response factor 23; AltName: Full=OsARF1
gi|125534572|gb|EAY81120.1| hypothetical protein OsI_36300 [Oryza sativa Indica Group]
Length = 853
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 207/312 (66%), Positives = 250/312 (80%), Gaps = 9/312 (2%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPT- 59
+EQ+EASTNQ QR+ L+ LP KILC V+N+ L AE +TDEVYAQ+TLLPE Q E
Sbjct: 68 IEQVEASTNQVGEQRMQLYNLPWKILCEVMNVELKAEPDTDEVYAQLTLLPELKQQEDNG 127
Query: 60 -----TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQ 114
P A RP+VHSF K LTASDTSTHGGFSVLR+HA ECLPPLDM++ PTQ
Sbjct: 128 STEEEVPSAPAAGHVRPRVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQ 187
Query: 115 ELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGV 174
ELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV++KRLVAGD F+FLRGENGEL VGV
Sbjct: 188 ELVAKDLHGVEWRFRHIFRGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGV 247
Query: 175 RCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLE 232
R RQQ+++PSSVISS SMHLGVLATA HAV T TMF VYYKPRTS +F++ ++Y+E
Sbjct: 248 RRAMRQQTNVPSSVISSHSMHLGVLATAWHAVNTGTMFTVYYKPRTSPAEFVVPYDRYME 307
Query: 233 AVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASIT 291
++ +++GMR+KMRFEGE++PE+RF+GT+VG+ D P W +SKWRSLKV+WDE +SI
Sbjct: 308 SLKRNYSIGMRFKMRFEGEEAPEQRFTGTIVGMGDSDPAGWPESKWRSLKVRWDEASSIP 367
Query: 292 RPDRVSPWEIEP 303
RP+RVSPW+IEP
Sbjct: 368 RPERVSPWQIEP 379
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 110/184 (59%), Gaps = 12/184 (6%)
Query: 451 GTSCRLFGIELINHATS---SAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKE 507
G SC+LFGI L + A S +PS V + T G + + SD +K K
Sbjct: 634 GASCKLFGIHLDSPAKSEPLKSPSSVVYDGTPQTPGATEWRRPDVTEVEKCSDPSKAMKP 693
Query: 508 KKQEQVQVSPKESQSKQ-----SCLT---SNRSRTKVQMQGVAVGRALDLTTLVGYDHLI 559
Q P++ S+Q SC + S RS KV QG+A+GR++DLT GY+ LI
Sbjct: 694 LDTPQPDSVPEKPSSQQASRNMSCKSQGVSTRSCKKVHKQGIALGRSVDLTKFNGYEELI 753
Query: 560 DELEEMFDIKGQLHT-RTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 618
EL++MFD G+L + +W +VYTD+EGDMMLVGDDPW EFC+MV +IFI + ++V++M
Sbjct: 754 AELDDMFDFNGELKGPKKEWMVVYTDNEGDMMLVGDDPWIEFCDMVHKIFIYTREEVQRM 813
Query: 619 SPGS 622
+PG+
Sbjct: 814 NPGT 817
>gi|224028299|gb|ACN33225.1| unknown [Zea mays]
Length = 832
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 222/386 (57%), Positives = 278/386 (72%), Gaps = 28/386 (7%)
Query: 1 MEQLEASTNQELNQR-IPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPT 59
+EQ+EASTNQ Q+ PL+ LP KI C+++NI L E +TDEVYAQ+TLLP+ Q+E T
Sbjct: 53 IEQVEASTNQLAEQQGTPLYNLPWKIPCKLMNIELKVEPDTDEVYAQLTLLPDKKQDENT 112
Query: 60 T----------PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQ 109
+ P PA + P +HSF K LTASDTSTHGGFSVLR+HA ECLPPLDM+Q
Sbjct: 113 STTVEEEEVVVPPALPATNEGPHIHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQ 172
Query: 110 STPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGE 169
P QELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV++KRLVAGD F+FLRGENGE
Sbjct: 173 HPPNQELVAKDLHGAEWRFRHIFRGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGE 232
Query: 170 LHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISL 227
L VGVR R Q+++PSSVISS +MHLGVLATA HAV T +MF VYYKPRTS +F++S
Sbjct: 233 LRVGVRRALRHQTTIPSSVISSHNMHLGVLATAWHAVNTDSMFTVYYKPRTSPAEFVVSR 292
Query: 228 NKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPH-WKDSKWRSLKVQWDE 286
++Y E++ +++GMR+KMRFEGE++ E+RF+GT+VG+ P W DSKWRSLKV+WDE
Sbjct: 293 DRYYESLKRNYSIGMRFKMRFEGEEAAEQRFTGTIVGIGASDPSGWADSKWRSLKVRWDE 352
Query: 287 PASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARL 346
P+SI+RP+RVSPW+IEP S +P V P+ + KR R S+ P D+ + S +
Sbjct: 353 PSSISRPERVSPWQIEP---SVSPCHVNPLPVRFKRSRSSVNALPSDVSTVTREVTSKVM 409
Query: 347 AQS---------HN--LTQLSVTAED 361
A S HN TQL+V D
Sbjct: 410 ADSQQNSLTRALHNQGRTQLTVRYHD 435
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 115/197 (58%), Gaps = 25/197 (12%)
Query: 445 GRKTETGTSCRLFGIELINHATSSAPSEKVPV---SSLTTEGHIISTISAAADS------ 495
G + GTS +LFGI L +P + P+ S+ +G + ++ S +
Sbjct: 606 GVQKSKGTSFKLFGIPL------GSPEKSEPLVSPPSVAYDGKLQTSPSEKGNQLDVVEV 659
Query: 496 DGKSDIAKEFK-------EKKQEQVQVSPKESQSKQSCL--TSNRSRTKVQMQGVAVGRA 546
D S +K K + E Q SP+ + + Q+ + +S RS KV QG A+GR+
Sbjct: 660 DNCSHPSKTVKPLDGPQSDSITENNQPSPEATLNIQNKVQSSSTRSCKKVHKQGSALGRS 719
Query: 547 LDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVK 605
+DLT YD LI EL++MFD G+L + K W +VYTD+EGD+MLVGDDPW+EFC+MV
Sbjct: 720 IDLTKFACYDELIAELDQMFDFDGELKSPCKSWLVVYTDNEGDIMLVGDDPWNEFCDMVH 779
Query: 606 RIFICSSQDVKKMSPGS 622
+IFI + ++V++M+PG+
Sbjct: 780 KIFIYTREEVERMNPGA 796
>gi|224029659|gb|ACN33905.1| unknown [Zea mays]
Length = 830
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 222/386 (57%), Positives = 278/386 (72%), Gaps = 28/386 (7%)
Query: 1 MEQLEASTNQELNQR-IPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPT 59
+EQ+EASTNQ Q+ PL+ LP KI C+++NI L E +TDEVYAQ+TLLP+ Q+E T
Sbjct: 51 IEQVEASTNQLAEQQGTPLYNLPWKIPCKLMNIELKVEPDTDEVYAQLTLLPDKKQDENT 110
Query: 60 T----------PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQ 109
+ P PA + P +HSF K LTASDTSTHGGFSVLR+HA ECLPPLDM+Q
Sbjct: 111 STTVEEEEVVVPPALPATNEGPHIHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQ 170
Query: 110 STPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGE 169
P QELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV++KRLVAGD F+FLRGENGE
Sbjct: 171 HPPNQELVAKDLHGAEWRFRHIFRGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGE 230
Query: 170 LHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISL 227
L VGVR R Q+++PSSVISS +MHLGVLATA HAV T +MF VYYKPRTS +F++S
Sbjct: 231 LRVGVRRALRHQTTIPSSVISSHNMHLGVLATAWHAVNTDSMFTVYYKPRTSPAEFVVSR 290
Query: 228 NKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPH-WKDSKWRSLKVQWDE 286
++Y E++ +++GMR+KMRFEGE++ E+RF+GT+VG+ P W DSKWRSLKV+WDE
Sbjct: 291 DRYYESLKRNYSIGMRFKMRFEGEEAAEQRFTGTIVGIGASDPSGWADSKWRSLKVRWDE 350
Query: 287 PASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARL 346
P+SI+RP+RVSPW+IEP S +P V P+ + KR R S+ P D+ + S +
Sbjct: 351 PSSISRPERVSPWQIEP---SVSPCHVNPLPVRFKRSRSSVNALPSDVSTVTREVTSKVM 407
Query: 347 AQS---------HN--LTQLSVTAED 361
A S HN TQL+V D
Sbjct: 408 ADSQQNSLTRALHNQGRTQLTVRYHD 433
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 115/197 (58%), Gaps = 25/197 (12%)
Query: 445 GRKTETGTSCRLFGIELINHATSSAPSEKVPV---SSLTTEGHIISTISAAADS------ 495
G + GTS +LFGI L +P + P+ S+ +G + ++ S +
Sbjct: 604 GVQKSKGTSFKLFGIPL------GSPEKSEPLVSPPSVAYDGKLQTSPSEKGNQLDVVEV 657
Query: 496 DGKSDIAKEFK-------EKKQEQVQVSPKESQSKQSCL--TSNRSRTKVQMQGVAVGRA 546
D S +K K + E Q SP+ + + Q+ + +S RS KV QG A+GR+
Sbjct: 658 DNCSHPSKTVKPLDGPQSDSITENNQPSPEATLNIQNKVQSSSTRSCKKVHKQGSALGRS 717
Query: 547 LDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVK 605
+DLT YD LI EL++MFD G+L + K W +VYTD+EGD+MLVGDDPW+EFC+MV
Sbjct: 718 IDLTKFACYDELIAELDQMFDFDGELKSPCKSWLVVYTDNEGDIMLVGDDPWNEFCDMVH 777
Query: 606 RIFICSSQDVKKMSPGS 622
+IFI + ++V++M+PG+
Sbjct: 778 KIFIYTREEVERMNPGA 794
>gi|414875582|tpg|DAA52713.1| TPA: hypothetical protein ZEAMMB73_730460 [Zea mays]
Length = 624
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 274/646 (42%), Positives = 362/646 (56%), Gaps = 105/646 (16%)
Query: 1 MEQLEASTNQEL-NQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE-P 58
+EQL+ T+ L ++I +F++P+KILC+ AE ETDE+YAQITL PEP Q + P
Sbjct: 42 LEQLQEPTDPALLAEQIKMFQVPNKILCK-------AETETDEMYAQITLQPEPDQVDLP 94
Query: 59 TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
P+P ++ RP VHSF K+LT SDTSTHGGFSVLR+HA ECLP LDM+ TPTQEL+
Sbjct: 95 QLPEPPLQETSRPVVHSFCKILTPSDTSTHGGFSVLRRHANECLPALDMSMPTPTQELIT 154
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
KDLHG EWRFKHI+RGQPRRHLLTTGWSTFVTSK+L+AGD F
Sbjct: 155 KDLHGSEWRFKHIYRGQPRRHLLTTGWSTFVTSKKLIAGDAF------------------ 196
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKF 238
VY + SQ+I+ LNKYLE+ F
Sbjct: 197 -----------------------------------VYLRLSQSQYIVRLNKYLESSKIGF 221
Query: 239 AVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSP 298
VGMR+KM FEG+D P ++FSGTVV D SP W+ S+W++LKV+WDE ++ P+RVS
Sbjct: 222 DVGMRFKMSFEGDDVPIKKFSGTVVDKGDLSPQWQGSEWKTLKVKWDEATNLNGPERVSS 281
Query: 299 WEIEPFVASATPNLVQPVL--AKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLS 356
WEIEPF ASA P + PV KNKRPR + E + A W + + H T +S
Sbjct: 282 WEIEPFDASA-PAITMPVQPSMKNKRPRETAEGLDIHALEPAQEFWLSGRPEQHEKTSVS 340
Query: 357 VTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQS-DGEWL-------TSPRV-KFSQQLFQ 407
++E K + VAW + + +S+ S+ + + + G W + P + + SQ+LFQ
Sbjct: 341 -SSEPK---HQVAWTSERAGYSAMSSSICQNSAVTGSWFKGFNSSGSHPSLPEISQKLFQ 396
Query: 408 EAIDDNKNISAWPAHSGHSTPHP-SKPNNDTLLEQVET------------GRKTETGTSC 454
+D + + WP S + P SK + +T L +T K E G
Sbjct: 397 VTSNDAR-VPPWPGLSAYHADEPSSKLSCNTALCSYQTEEVAPRFSNAVEEEKKEPGM-F 454
Query: 455 RLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQ 514
RLFG+ LINHA SSA ++K V + T + DS S + K+ V
Sbjct: 455 RLFGVNLINHARSSATADKTSVGAGETSARAAGSFE---DSAQLSRVTKDHT----HMVN 507
Query: 515 VSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT 574
SP+E QS QSC S RSR KVQM G V RA+DL L GY+ L+ E+ EMF+IK L +
Sbjct: 508 GSPREIQSHQSC--SGRSRIKVQMHGNDVCRAVDLGNLDGYEQLMGEVGEMFEIK-DLGS 564
Query: 575 RTK--WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 618
+ K W++ + +DE + M VG PW EFC MV++I I S D M
Sbjct: 565 KEKEEWKVTFINDENETMEVGAVPWQEFCQMVRKIVIHSIGDRGHM 610
>gi|379323192|gb|AFD01295.1| auxin response factor 2-3 [Brassica rapa subsp. pekinensis]
Length = 888
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 218/329 (66%), Positives = 265/329 (80%), Gaps = 8/329 (2%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE-PT 59
+EQ+EASTNQ Q++PL+ LPSKILCRV+N+ L AE ++DEVYAQITLLPE Q+E
Sbjct: 116 IEQVEASTNQAAEQQMPLYDLPSKILCRVINVDLKAEVDSDEVYAQITLLPEAIQDENAI 175
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
+ P PR +VHSF K LTASDTSTHGGFSVLR+HA ECLPPLDM++ PTQELVAK
Sbjct: 176 EKEAPPPPPPRFQVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAK 235
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH EWRF+HIFRGQPRRHLL +GWS FV+SKRLVAGD F+FLRGENGEL VGVR R
Sbjct: 236 DLHANEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 295
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNK 237
QQ ++ SSVISS SMHLGVLATA HA++T TMF VYYKPRT S+FI+ ++Y+E+V N
Sbjct: 296 QQGNVSSSVISSHSMHLGVLATAWHAISTGTMFSVYYKPRTSPSEFIVPFDQYMESVKNN 355
Query: 238 FAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRV 296
+++GMR+KMRFEGE++PE+RF+GT+VG+ED P W SKWRSLKV+WDE +SI RPDRV
Sbjct: 356 YSIGMRFKMRFEGEEAPEQRFTGTIVGIEDSDPTRWAKSKWRSLKVRWDETSSIPRPDRV 415
Query: 297 SPWEIEPFVASATPNLVQPV-LAKNKRPR 324
SPW++EP +A P + PV + + KRPR
Sbjct: 416 SPWKLEPALA---PPALSPVPMPRPKRPR 441
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/190 (40%), Positives = 109/190 (57%), Gaps = 11/190 (5%)
Query: 440 EQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKS 499
E VE K+ G +CRLFGI L+N+ + + + T G T D +S
Sbjct: 669 EMVEDTAKSRDG-NCRLFGIPLVNNVNVTESTMSPRNNFNDTAGLTQMTSPKVQDLSDQS 727
Query: 500 DIAKEFKEKK------QEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLV 553
+K +++ Q PK+ +K S+RS TKVQ QG+A+GR++DL+
Sbjct: 728 KGSKSTNDQREQGRPFQANHHPHPKDVHTKTH---SSRSCTKVQKQGIALGRSVDLSKFQ 784
Query: 554 GYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSS 612
Y+ LI EL+ MF+ G+L K W IVYTDDE DMMLVGDDPW EFC MV++I I +
Sbjct: 785 NYEELIAELDRMFEFNGELMAPKKDWLIVYTDDENDMMLVGDDPWQEFCGMVRKISIYTK 844
Query: 613 QDVKKMSPGS 622
++V+KM+PG+
Sbjct: 845 EEVRKMNPGT 854
>gi|414877792|tpg|DAA54923.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
Length = 707
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 212/348 (60%), Positives = 265/348 (76%), Gaps = 17/348 (4%)
Query: 1 MEQLEASTNQELNQR-IPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPT 59
+EQ+EASTNQ Q+ PL+ LP KI C+++NI L E +TDEVYAQ+TLLP+ Q+E T
Sbjct: 51 IEQVEASTNQLAEQQGTPLYNLPWKIPCKLMNIELKVEPDTDEVYAQLTLLPDKKQDENT 110
Query: 60 T----------PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQ 109
+ P PA + P +HSF K LTASDTSTHGGFSVLR+HA ECLPPLDM+Q
Sbjct: 111 STTVEEEEVVVPPALPATNEGPHIHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQ 170
Query: 110 STPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGE 169
P QELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV++KRLVAGD F+FLRGENGE
Sbjct: 171 HPPNQELVAKDLHGAEWRFRHIFRGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGE 230
Query: 170 LHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISL 227
L VGVR R Q+++PSSVISS +MHLGVLATA HAV T +MF VYYKPRTS +F++S
Sbjct: 231 LRVGVRRALRHQTTIPSSVISSHNMHLGVLATAWHAVNTDSMFTVYYKPRTSPAEFVVSR 290
Query: 228 NKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPH-WKDSKWRSLKVQWDE 286
++Y E++ +++GMR+KMRFEGE++ E+RF+GT+VG+ P W DSKWRSLKV+WDE
Sbjct: 291 DRYYESLKRNYSIGMRFKMRFEGEEAAEQRFTGTIVGIGASDPSGWADSKWRSLKVRWDE 350
Query: 287 PASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDL 334
P+SI+RP+RVSPW+IEP S +P V P+ + KR R S+ P D+
Sbjct: 351 PSSISRPERVSPWQIEP---SVSPCHVNPLPVRFKRSRSSVNALPSDV 395
>gi|326520141|dbj|BAK03995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 826
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 230/412 (55%), Positives = 285/412 (69%), Gaps = 30/412 (7%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPT- 59
+EQ+EAS NQ ++ L+ LPSK+LCRV+N+ L AE +TDEVYAQ+ L+PEP Q+E
Sbjct: 52 IEQVEASMNQVAANQMRLYDLPSKLLCRVLNVELKAEADTDEVYAQVMLMPEPEQSEAAA 111
Query: 60 ---------TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQS 110
T PA RP V SF K LTASDTSTHGGFSVLR+HA ECLPPLDM QS
Sbjct: 112 TTTEKSSSATGGTMPA---RPAVRSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTQS 168
Query: 111 TPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGEL 170
PTQELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV+SKRLVAGD F+FLRGE+GEL
Sbjct: 169 PPTQELVAKDLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGESGEL 228
Query: 171 HVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLN 228
VGVR RQ S++ SSVISS SMHLGVLATA HA+ T+TMF VYYKPRT S+FII +
Sbjct: 229 RVGVRRAMRQLSNIASSVISSHSMHLGVLATAWHAINTKTMFTVYYKPRTSRSEFIIPYD 288
Query: 229 KYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPA 288
KY E+V N +++G R+KMRFEGE++PE+RF+GT+VG ++ W +S WRSLKV+WDE +
Sbjct: 289 KYTESVKNIYSIGTRFKMRFEGEEAPEQRFTGTIVGSDNLDQLWPESSWRSLKVRWDESS 348
Query: 289 SITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPRLSMEVPPLDLPSAASAPWSARLA 347
+I RPDRVSPWEIEP AS+ P V P+ L++ KR R + VPP AS S R
Sbjct: 349 TIPRPDRVSPWEIEP--ASSPP--VNPLPLSRAKRSRPN--VPP------ASPESSVRTK 396
Query: 348 QSHNLTQLSVTAEDKRIDNHVAWHH--KHSDFSSNSNFMSRTQSDGEWLTSP 397
+ + + +N V H + + + ++F + Q W T P
Sbjct: 397 EGATKADMDCAQAQRNQNNTVLPGHEQRSNKLTDINDFDATVQKPMVWSTPP 448
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 78/189 (41%), Positives = 108/189 (57%), Gaps = 26/189 (13%)
Query: 447 KTETGTSCRLFGIEL------INHATSSAPSEKVPV---------SSLTTEGHIISTISA 491
KT G+ ++FG ++ NH S + PV L T+ ++S
Sbjct: 607 KTTEGSDFKIFGFKVDTASAGFNHLNSPMAATHEPVLQTQPSVSLDHLQTDCSPEVSLSI 666
Query: 492 AADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTT 551
A +D EK +Q S K+ QSK S S RS TKV QGVA+GR++DL+
Sbjct: 667 AGTTD---------NEKNIQQCPQSSKDVQSK-SHGASTRSCTKVHKQGVALGRSVDLSK 716
Query: 552 LVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFIC 610
V YD L EL++MFD G+L + K W+IVYTD+EGDMMLVGDDPW EFC+MV++I I
Sbjct: 717 FVDYDELTAELDKMFDFDGELMSSNKNWQIVYTDNEGDMMLVGDDPWEEFCSMVRKICIY 776
Query: 611 SSQDVKKMS 619
+ ++V+KM+
Sbjct: 777 TKEEVQKMN 785
>gi|242085500|ref|XP_002443175.1| hypothetical protein SORBIDRAFT_08g014320 [Sorghum bicolor]
gi|241943868|gb|EES17013.1| hypothetical protein SORBIDRAFT_08g014320 [Sorghum bicolor]
Length = 839
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 213/366 (58%), Positives = 272/366 (74%), Gaps = 19/366 (5%)
Query: 1 MEQLEASTNQELNQR-IPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPT 59
+EQ+EASTNQ Q+ PL+ LP KI C+++NI L AE +TDEVYAQ+TLLP+ Q+E T
Sbjct: 57 IEQVEASTNQIAEQQGTPLYNLPWKIPCKLMNIELKAEPDTDEVYAQLTLLPDKKQDENT 116
Query: 60 TPDP------------CPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDM 107
+ P + P++HSF K LTASDTSTHGGFSVLR+HA ECLPPLDM
Sbjct: 117 STTVENEEAEEEVVPHAPPTNEGPRIHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDM 176
Query: 108 NQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGEN 167
+Q P QELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV++KRLVAGD F+FLRGEN
Sbjct: 177 SQHPPNQELVAKDLHGIEWRFRHIFRGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGEN 236
Query: 168 GELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFII 225
GEL VGVR R Q+++PSSVISS SMHLGVLATA HAV T +MF VYYKPRTS +F++
Sbjct: 237 GELRVGVRRALRHQTTIPSSVISSHSMHLGVLATAWHAVNTGSMFTVYYKPRTSPAEFVV 296
Query: 226 SLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPH-WKDSKWRSLKVQW 284
S ++Y E++ +++GMR+KMRFEGE++ E+RF+GT+VG+ P W DSKWRSLKV+W
Sbjct: 297 SRDRYYESLKRNYSIGMRFKMRFEGEEAAEQRFTGTIVGIGASDPSGWADSKWRSLKVRW 356
Query: 285 DEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSA 344
DE +S+ RP+RVSPW+IEP + +P+ V P+ + KR R S+ P D+P+ + S
Sbjct: 357 DEASSVPRPERVSPWQIEPAI---SPSPVNPLPVRFKRSRSSVNASPSDVPTVSREVASK 413
Query: 345 RLAQSH 350
+A+S
Sbjct: 414 VMAESQ 419
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 113/191 (59%), Gaps = 25/191 (13%)
Query: 451 GTSCRLFGIELINHATSSAPSEKVPV---SSLTTEGHIISTISAAADS------DGKSDI 501
GTS +LFGI L +P + P+ S+ +G + ++ S + D SD
Sbjct: 618 GTSFKLFGIPL------GSPEKSEPLVSPPSVAYDGKLQTSPSEKGNQLDIVGVDNCSDP 671
Query: 502 AKEFK-------EKKQEQVQVSPKESQSKQSCL--TSNRSRTKVQMQGVAVGRALDLTTL 552
+K K + E Q P+ +Q+ Q+ + +S RS KV QG A+GR++DLT
Sbjct: 672 SKTVKPFDGPQSDSITENNQPCPEATQNIQNKVQSSSTRSCKKVHKQGSALGRSIDLTKF 731
Query: 553 VGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICS 611
YD LI EL++MFD G+L K W +VYTD+EGD+MLVGDDPW+EFC+MV +IFI +
Sbjct: 732 TCYDELIAELDQMFDFDGELKNPCKNWLVVYTDNEGDIMLVGDDPWNEFCDMVHKIFIYT 791
Query: 612 SQDVKKMSPGS 622
++V++M+PG+
Sbjct: 792 REEVERMNPGA 802
>gi|26251300|gb|AAG43286.2|AF140228_1 putative auxin response factor 1 [Oryza sativa Indica Group]
Length = 857
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 205/312 (65%), Positives = 249/312 (79%), Gaps = 9/312 (2%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPT- 59
+EQ+EASTNQ QR+ L+ LP KILC V+N+ L AE +TDEVYAQ+TLLPE + E
Sbjct: 67 IEQVEASTNQVGEQRMQLYNLPWKILCEVMNVELKAEPDTDEVYAQLTLLPELKRQEDNG 126
Query: 60 -----TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQ 114
P A RP+VHSF K LTASDTSTHGGFSVLR+HA ECLPPLDM++ PTQ
Sbjct: 127 STEEEVPSAPAAGHVRPRVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQ 186
Query: 115 ELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGV 174
ELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV++KRLVAGD F+FLRGENGEL VGV
Sbjct: 187 ELVAKDLHGVEWRFRHIFRGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGV 246
Query: 175 RCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLE 232
R RQQ+++PSSVISS SMHLGVLATA HAV T TMF VYYKPRTS +F++ ++Y+E
Sbjct: 247 RRAMRQQTNVPSSVISSHSMHLGVLATAWHAVNTGTMFTVYYKPRTSPAEFVVPYDRYME 306
Query: 233 AVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASIT 291
++ +++GMR+KMRFE E++PE+RF+GT+VG+ D P W +SKWRSLKV+WDE +SI
Sbjct: 307 SLKRNYSIGMRFKMRFESEEAPEQRFTGTIVGMGDSDPAGWPESKWRSLKVRWDEASSIP 366
Query: 292 RPDRVSPWEIEP 303
RP+RVSPW+IEP
Sbjct: 367 RPERVSPWQIEP 378
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 105/189 (55%), Gaps = 17/189 (8%)
Query: 451 GTSCRLFGIELINHATSSAPSEKVPV---SSLTTEGHIISTISAAADSDGKSDIAKEFKE 507
G SC+LFGI L + A S V + T G + + SD +K K
Sbjct: 633 GASCKLFGIHLDSPAKSEPSKSPSSVVYDGTPQTPGATEWRRPDVTEVEKCSDPSKAMKP 692
Query: 508 KKQEQVQVSPKE-------------SQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVG 554
Q P++ + S +S S RS KV QG+A+GR++DLT G
Sbjct: 693 LDTPQPDSVPEKPSSQQASSQQASRNMSCKSQGVSTRSCKKVHKQGIALGRSVDLTKFNG 752
Query: 555 YDHLIDELEEMFDIKGQLHT-RTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQ 613
Y+ LI EL++MFD G+L + +W +VYTD+EGDMMLVGDDPW EFC+MV +IFI + +
Sbjct: 753 YEELIAELDDMFDFNGELKGPKKEWMVVYTDNEGDMMLVGDDPWIEFCDMVHKIFIYTRE 812
Query: 614 DVKKMSPGS 622
+V++M+PG+
Sbjct: 813 EVQRMNPGT 821
>gi|413920955|gb|AFW60887.1| auxin response factor [Zea mays]
Length = 849
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 214/362 (59%), Positives = 268/362 (74%), Gaps = 13/362 (3%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
+EQ+EASTNQ Q + + LP KILC V+N+ L AE + DEVYAQ+TLLPE E +
Sbjct: 69 IEQVEASTNQVAEQHMQFYDLPWKILCEVMNVELKAEPDNDEVYAQLTLLPESKPEENGS 128
Query: 61 PDPCPADSP----RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQEL 116
+ PA P RP+VHSF K LTASDTSTHGGFSVLR+HA ECLPPLDM + PTQEL
Sbjct: 129 SEEMPASPPAALARPRVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQEL 188
Query: 117 VAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRC 176
VAKDLHG EWRF+HIFRGQPRRHLL +GWS FV++KRLVAGD F+FLRG++GEL VGVR
Sbjct: 189 VAKDLHGVEWRFRHIFRGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGDSGELRVGVRR 248
Query: 177 LARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAV 234
RQQ+++PSSVISS SMHLGVLATA HAV T TMF VYYKPRTS +F++ ++Y+E++
Sbjct: 249 AMRQQANVPSSVISSHSMHLGVLATAWHAVNTGTMFTVYYKPRTSPAEFVVPCDRYMESL 308
Query: 235 NNKFAVGMRYKMRFEGEDSPERRFSGTVVG-VEDFSPHWKDSKWRSLKVQWDEPASITRP 293
+ +GMR+KMRFEGE++PE+RF+GT+VG V+ W +SKWR LKV+WDE +SI RP
Sbjct: 309 KRNYPIGMRFKMRFEGEEAPEQRFTGTIVGNVDPDQAGWAESKWRYLKVRWDEASSIPRP 368
Query: 294 DRVSPWEIEPFVASATPNLVQPV-LAKNKRPRLS--MEVPPLDLPSAASAPWSARLAQSH 350
+RVSPW+IEP V +P + P+ + + KRPR + +P P+ +AP Q H
Sbjct: 369 ERVSPWQIEPAV---SPPPINPLPVHRPKRPRSNAVASLPESSAPTKEAAPKVTLETQQH 425
Query: 351 NL 352
L
Sbjct: 426 AL 427
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/179 (42%), Positives = 107/179 (59%), Gaps = 11/179 (6%)
Query: 451 GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 510
G SC+LFGI L + A S V++ E + I D+D + K K+
Sbjct: 634 GNSCKLFGIHLDSPAKSEPLKSPPSVATPAAEKWMADGI----DADKSPEPHKTPKQLGA 689
Query: 511 EQV----QVSPKESQSKQ--SCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEE 564
QV + P+ S+ Q S S RS KV QG+A+GR++DLT GY L+ EL+E
Sbjct: 690 TQVDPVPERCPQASRGTQCKSQGGSTRSCKKVHKQGMALGRSVDLTKFNGYTELVAELDE 749
Query: 565 MFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 622
MFD G+L +K W +VYTD EGDMMLVGDDPW+EFC+MV +IF+ + ++V++M+PG+
Sbjct: 750 MFDFNGELKGCSKEWMVVYTDYEGDMMLVGDDPWNEFCSMVHKIFVYTREEVQRMNPGA 808
>gi|357152661|ref|XP_003576194.1| PREDICTED: auxin response factor 24-like [Brachypodium distachyon]
Length = 813
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 212/344 (61%), Positives = 260/344 (75%), Gaps = 13/344 (3%)
Query: 1 MEQLEASTNQELNQR-IPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPT 59
+EQ+EASTNQ Q+ PL+ LP KI C+V+N+ L AEQ+TDEVYAQ+TLLPE QNE
Sbjct: 50 IEQVEASTNQVAEQQGAPLYNLPWKIPCKVMNVELKAEQDTDEVYAQLTLLPE-KQNEHA 108
Query: 60 T--------PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQST 111
+ P PA RP+VHSF K LTASDTSTHGGFSVLR+HA ECLPPLDM+Q+
Sbjct: 109 STEGEKEEVPAAVPAVHERPRVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQNP 168
Query: 112 PTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELH 171
PTQEL+ +DLHG EWRF+HIFRGQP+RHLL +GWS FV++KRLVA D F+FLRGENGEL
Sbjct: 169 PTQELMTRDLHGVEWRFRHIFRGQPKRHLLQSGWSVFVSNKRLVARDAFIFLRGENGELR 228
Query: 172 VGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNK 229
VGVR RQQ+++PSSVISS SMHLGVLATA HAV T +MF VYYKPRTS +F++ +
Sbjct: 229 VGVRRAMRQQANIPSSVISSHSMHLGVLATAWHAVNTGSMFTVYYKPRTSPAEFVVPCDL 288
Query: 230 YLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPA 288
Y E++ ++GMR+KMRFEGE++ E+RF+GT+VG+ D P W DSKWRSLKV+WDE +
Sbjct: 289 YYESMKRNHSIGMRFKMRFEGEEAAEQRFTGTIVGIGDSDPSGWADSKWRSLKVRWDEAS 348
Query: 289 SITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPL 332
S+ RPDRVSPW+IEP V+ + N +Q K RP P L
Sbjct: 349 SVPRPDRVSPWQIEPAVSPLSVNPLQAPRNKRSRPNAIASSPEL 392
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 103/184 (55%), Gaps = 12/184 (6%)
Query: 451 GTSCRLFGIELINHATS----SAPS------EKVPVSSLTTEGHIISTISAAADSDGKSD 500
G+ C LFG L A S S PS + P S + +I + S S
Sbjct: 610 GSPCMLFGFPLDGPAKSEPMISPPSVAYDGMPETPCSEKQPQPEVIELDRSPGTSKLVSP 669
Query: 501 IAKEFKEKKQEQVQVSPKESQSKQSCL-TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLI 559
+ + + + Q P+ +++ QS L S RS KV QG+A+GR++DLT YD LI
Sbjct: 670 LDENQSDSAMAKHQTCPEATRNIQSKLQCSTRSCKKVHKQGIALGRSVDLTRFTCYDELI 729
Query: 560 DELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 618
EL+ MFD G+L + W +VYTD + DMMLVGDDPW+EFC++V +IFI + ++V KM
Sbjct: 730 AELDRMFDFGGELKGSCENWMVVYTDSDNDMMLVGDDPWNEFCDVVHKIFIYTREEVSKM 789
Query: 619 SPGS 622
+PG+
Sbjct: 790 NPGA 793
>gi|295844300|gb|ADG43147.1| auxin response factor 13 [Zea mays]
gi|413920956|gb|AFW60888.1| auxin response factor [Zea mays]
Length = 850
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 216/366 (59%), Positives = 269/366 (73%), Gaps = 20/366 (5%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE--- 57
+EQ+EASTNQ Q + + LP KILC V+N+ L AE + DEVYAQ+TLLPE Q E
Sbjct: 69 IEQVEASTNQVAEQHMQFYDLPWKILCEVMNVELKAEPDNDEVYAQLTLLPESKQPEENG 128
Query: 58 -----PTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTP 112
P +P PA RP+VHSF K LTASDTSTHGGFSVLR+HA ECLPPLDM + P
Sbjct: 129 SSEEMPASP---PAALARPRVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTRQPP 185
Query: 113 TQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHV 172
TQELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV++KRLVAGD F+FLRG++GEL V
Sbjct: 186 TQELVAKDLHGVEWRFRHIFRGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGDSGELRV 245
Query: 173 GVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKY 230
GVR RQQ+++PSSVISS SMHLGVLATA HAV T TMF VYYKPRTS +F++ ++Y
Sbjct: 246 GVRRAMRQQANVPSSVISSHSMHLGVLATAWHAVNTGTMFTVYYKPRTSPAEFVVPCDRY 305
Query: 231 LEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVG-VEDFSPHWKDSKWRSLKVQWDEPAS 289
+E++ + +GMR+KMRFEGE++PE+RF+GT+VG V+ W +SKWR LKV+WDE +S
Sbjct: 306 MESLKRNYPIGMRFKMRFEGEEAPEQRFTGTIVGNVDPDQAGWAESKWRYLKVRWDEASS 365
Query: 290 ITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPRLS--MEVPPLDLPSAASAPWSARL 346
I RP+RVSPW+IEP V +P + P+ + + KRPR + +P P+ +AP
Sbjct: 366 IPRPERVSPWQIEPAV---SPPPINPLPVHRPKRPRSNAVASLPESSAPTKEAAPKVTLE 422
Query: 347 AQSHNL 352
Q H L
Sbjct: 423 TQQHAL 428
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/179 (42%), Positives = 107/179 (59%), Gaps = 11/179 (6%)
Query: 451 GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 510
G SC+LFGI L + A S V++ E + I D+D + K K+
Sbjct: 635 GNSCKLFGIHLDSPAKSEPLKSPPSVATPAAEKWMADGI----DADKSPEPHKTPKQLGA 690
Query: 511 EQV----QVSPKESQSKQ--SCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEE 564
QV + P+ S+ Q S S RS KV QG+A+GR++DLT GY L+ EL+E
Sbjct: 691 TQVDPVPERCPQASRGTQCKSQGGSTRSCKKVHKQGMALGRSVDLTKFNGYTELVAELDE 750
Query: 565 MFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 622
MFD G+L +K W +VYTD EGDMMLVGDDPW+EFC+MV +IF+ + ++V++M+PG+
Sbjct: 751 MFDFNGELKGCSKEWMVVYTDYEGDMMLVGDDPWNEFCSMVHKIFVYTREEVQRMNPGA 809
>gi|122204131|sp|Q2QQX6.1|ARFX_ORYSJ RecName: Full=Auxin response factor 24
gi|77555450|gb|ABA98246.1| Auxin response factor 2, putative, expressed [Oryza sativa Japonica
Group]
Length = 841
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 218/352 (61%), Positives = 262/352 (74%), Gaps = 23/352 (6%)
Query: 1 MEQLEASTNQELNQR-IPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQ---- 55
+EQ+EASTNQ Q+ PL+ LP KI C+V+N+ L AE +TDEVYAQ+TLLPE Q
Sbjct: 59 IEQVEASTNQVAEQQGAPLYNLPWKIPCKVMNVELKAEPDTDEVYAQLTLLPEKQQDGNG 118
Query: 56 --NEPTTPDPC-------PADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLD 106
N + D PA + RP+VHSF K LTASDTSTHGGFSVLR+HA ECLPPLD
Sbjct: 119 SGNGNVSKDKVEEEEVVPPAATERPRVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLD 178
Query: 107 MNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGE 166
M+Q PTQELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV++KRLVAGD F+FLRGE
Sbjct: 179 MSQHPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGE 238
Query: 167 NGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFI 224
NGEL VGVR RQQ+++PSSVISS SMHLGVLATA HAV T TMF VYYKPRT S+F+
Sbjct: 239 NGELRVGVRRAMRQQANIPSSVISSHSMHLGVLATAWHAVNTGTMFTVYYKPRTSPSEFV 298
Query: 225 ISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPH-WKDSKWRSLKVQ 283
+ + Y E++ ++GMR+KM FEGE++ E+RF+GT+VGV D P W DSKWRSLKV+
Sbjct: 299 VPRDLYKESLKRNHSIGMRFKMTFEGEEAAEQRFTGTIVGVGDSDPSGWADSKWRSLKVR 358
Query: 284 WDEPASITRPDRVSPWEIEPFVASATPNLVQPVLA---KNKRPRLSMEVPPL 332
WDE AS+ RPDRVSPW+IEP + +P+ V P+ A K RP + P L
Sbjct: 359 WDEAASVPRPDRVSPWQIEP---ANSPSPVNPLPAPRTKRARPNVLASSPDL 407
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 146/282 (51%), Gaps = 35/282 (12%)
Query: 366 NHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHS-- 423
NH + S N+ F Q+ +L +P + Q+ N ++ AH
Sbjct: 534 NHNMYPGTWSLMPPNTGFGVNQQN---YLMTPDITLPQRSLNAKFGGNGAFTSLRAHGID 590
Query: 424 -------GHSTP--HPSKPNNDTLLEQ---VETGRKTETGTSCRLFGIELINHATSSAPS 471
GH P H ++ + Q ++ + G+SC LFGI L + A P
Sbjct: 591 QRSSGWLGHIEPSSHIDDASSSLIKPQPLVIDHNVQKAKGSSCMLFGISLDSPAK---PE 647
Query: 472 EKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFK-------EKKQEQVQVSP---KESQ 521
+ S+ +G + A + D SD +K K + +E+ Q P K Q
Sbjct: 648 LLISPPSVAFDGKLQQD---ALEEDECSDPSKTVKPLDGAQHDSAREKHQSCPDGTKNIQ 704
Query: 522 SKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEI 580
SKQ S+RS KV QG+A+GR++DLT YD LI EL++MFD G+L++ +K W +
Sbjct: 705 SKQQN-GSSRSCKKVHKQGIALGRSIDLTKFTCYDELIAELDQMFDFNGELNSSSKNWMV 763
Query: 581 VYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 622
VYTD+EGDMMLVGDDPW+EFCNMV +IFI + ++V+KM+PG+
Sbjct: 764 VYTDNEGDMMLVGDDPWNEFCNMVHKIFIYTREEVQKMNPGA 805
>gi|115488556|ref|NP_001066765.1| Os12g0479400 [Oryza sativa Japonica Group]
gi|77555451|gb|ABA98247.1| Auxin response factor 2, putative, expressed [Oryza sativa Japonica
Group]
gi|113649272|dbj|BAF29784.1| Os12g0479400 [Oryza sativa Japonica Group]
gi|215695057|dbj|BAG90248.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 840
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 218/351 (62%), Positives = 262/351 (74%), Gaps = 22/351 (6%)
Query: 1 MEQLEASTNQELNQR-IPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEP-----S 54
+EQ+EASTNQ Q+ PL+ LP KI C+V+N+ L AE +TDEVYAQ+TLLPE S
Sbjct: 59 IEQVEASTNQVAEQQGAPLYNLPWKIPCKVMNVELKAEPDTDEVYAQLTLLPEKQDGNGS 118
Query: 55 QNEPTTPDPC-------PADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDM 107
N + D PA + RP+VHSF K LTASDTSTHGGFSVLR+HA ECLPPLDM
Sbjct: 119 GNGNVSKDKVEEEEVVPPAATERPRVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDM 178
Query: 108 NQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGEN 167
+Q PTQELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV++KRLVAGD F+FLRGEN
Sbjct: 179 SQHPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGEN 238
Query: 168 GELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFII 225
GEL VGVR RQQ+++PSSVISS SMHLGVLATA HAV T TMF VYYKPRT S+F++
Sbjct: 239 GELRVGVRRAMRQQANIPSSVISSHSMHLGVLATAWHAVNTGTMFTVYYKPRTSPSEFVV 298
Query: 226 SLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPH-WKDSKWRSLKVQW 284
+ Y E++ ++GMR+KM FEGE++ E+RF+GT+VGV D P W DSKWRSLKV+W
Sbjct: 299 PRDLYKESLKRNHSIGMRFKMTFEGEEAAEQRFTGTIVGVGDSDPSGWADSKWRSLKVRW 358
Query: 285 DEPASITRPDRVSPWEIEPFVASATPNLVQPVLA---KNKRPRLSMEVPPL 332
DE AS+ RPDRVSPW+IEP + +P+ V P+ A K RP + P L
Sbjct: 359 DEAASVPRPDRVSPWQIEP---ANSPSPVNPLPAPRTKRARPNVLASSPDL 406
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 146/282 (51%), Gaps = 35/282 (12%)
Query: 366 NHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHS-- 423
NH + S N+ F Q+ +L +P + Q+ N ++ AH
Sbjct: 533 NHNMYPGTWSLMPPNTGFGVNQQN---YLMTPDITLPQRSLNAKFGGNGAFTSLRAHGID 589
Query: 424 -------GHSTP--HPSKPNNDTLLEQ---VETGRKTETGTSCRLFGIELINHATSSAPS 471
GH P H ++ + Q ++ + G+SC LFGI L + A P
Sbjct: 590 QRSSGWLGHIEPSSHIDDASSSLIKPQPLVIDHNVQKAKGSSCMLFGISLDSPAK---PE 646
Query: 472 EKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFK-------EKKQEQVQVSP---KESQ 521
+ S+ +G + A + D SD +K K + +E+ Q P K Q
Sbjct: 647 LLISPPSVAFDGKLQQD---ALEEDECSDPSKTVKPLDGAQHDSAREKHQSCPDGTKNIQ 703
Query: 522 SKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEI 580
SKQ S+RS KV QG+A+GR++DLT YD LI EL++MFD G+L++ +K W +
Sbjct: 704 SKQQN-GSSRSCKKVHKQGIALGRSIDLTKFTCYDELIAELDQMFDFNGELNSSSKNWMV 762
Query: 581 VYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 622
VYTD+EGDMMLVGDDPW+EFCNMV +IFI + ++V+KM+PG+
Sbjct: 763 VYTDNEGDMMLVGDDPWNEFCNMVHKIFIYTREEVQKMNPGA 804
>gi|413920954|gb|AFW60886.1| auxin response factor [Zea mays]
Length = 751
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 214/362 (59%), Positives = 268/362 (74%), Gaps = 13/362 (3%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
+EQ+EASTNQ Q + + LP KILC V+N+ L AE + DEVYAQ+TLLPE E +
Sbjct: 69 IEQVEASTNQVAEQHMQFYDLPWKILCEVMNVELKAEPDNDEVYAQLTLLPESKPEENGS 128
Query: 61 PDPCPADSP----RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQEL 116
+ PA P RP+VHSF K LTASDTSTHGGFSVLR+HA ECLPPLDM + PTQEL
Sbjct: 129 SEEMPASPPAALARPRVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQEL 188
Query: 117 VAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRC 176
VAKDLHG EWRF+HIFRGQPRRHLL +GWS FV++KRLVAGD F+FLRG++GEL VGVR
Sbjct: 189 VAKDLHGVEWRFRHIFRGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGDSGELRVGVRR 248
Query: 177 LARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAV 234
RQQ+++PSSVISS SMHLGVLATA HAV T TMF VYYKPRTS +F++ ++Y+E++
Sbjct: 249 AMRQQANVPSSVISSHSMHLGVLATAWHAVNTGTMFTVYYKPRTSPAEFVVPCDRYMESL 308
Query: 235 NNKFAVGMRYKMRFEGEDSPERRFSGTVVG-VEDFSPHWKDSKWRSLKVQWDEPASITRP 293
+ +GMR+KMRFEGE++PE+RF+GT+VG V+ W +SKWR LKV+WDE +SI RP
Sbjct: 309 KRNYPIGMRFKMRFEGEEAPEQRFTGTIVGNVDPDQAGWAESKWRYLKVRWDEASSIPRP 368
Query: 294 DRVSPWEIEPFVASATPNLVQPV-LAKNKRPRLS--MEVPPLDLPSAASAPWSARLAQSH 350
+RVSPW+IEP V +P + P+ + + KRPR + +P P+ +AP Q H
Sbjct: 369 ERVSPWQIEPAV---SPPPINPLPVHRPKRPRSNAVASLPESSAPTKEAAPKVTLETQQH 425
Query: 351 NL 352
L
Sbjct: 426 AL 427
>gi|413920952|gb|AFW60884.1| auxin response factor [Zea mays]
Length = 817
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 214/362 (59%), Positives = 268/362 (74%), Gaps = 13/362 (3%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
+EQ+EASTNQ Q + + LP KILC V+N+ L AE + DEVYAQ+TLLPE E +
Sbjct: 102 IEQVEASTNQVAEQHMQFYDLPWKILCEVMNVELKAEPDNDEVYAQLTLLPESKPEENGS 161
Query: 61 PDPCPADSP----RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQEL 116
+ PA P RP+VHSF K LTASDTSTHGGFSVLR+HA ECLPPLDM + PTQEL
Sbjct: 162 SEEMPASPPAALARPRVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQEL 221
Query: 117 VAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRC 176
VAKDLHG EWRF+HIFRGQPRRHLL +GWS FV++KRLVAGD F+FLRG++GEL VGVR
Sbjct: 222 VAKDLHGVEWRFRHIFRGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGDSGELRVGVRR 281
Query: 177 LARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAV 234
RQQ+++PSSVISS SMHLGVLATA HAV T TMF VYYKPRTS +F++ ++Y+E++
Sbjct: 282 AMRQQANVPSSVISSHSMHLGVLATAWHAVNTGTMFTVYYKPRTSPAEFVVPCDRYMESL 341
Query: 235 NNKFAVGMRYKMRFEGEDSPERRFSGTVVG-VEDFSPHWKDSKWRSLKVQWDEPASITRP 293
+ +GMR+KMRFEGE++PE+RF+GT+VG V+ W +SKWR LKV+WDE +SI RP
Sbjct: 342 KRNYPIGMRFKMRFEGEEAPEQRFTGTIVGNVDPDQAGWAESKWRYLKVRWDEASSIPRP 401
Query: 294 DRVSPWEIEPFVASATPNLVQPV-LAKNKRPRLS--MEVPPLDLPSAASAPWSARLAQSH 350
+RVSPW+IEP V +P + P+ + + KRPR + +P P+ +AP Q H
Sbjct: 402 ERVSPWQIEPAV---SPPPINPLPVHRPKRPRSNAVASLPESSAPTKEAAPKVTLETQQH 458
Query: 351 NL 352
L
Sbjct: 459 AL 460
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 85/154 (55%), Gaps = 11/154 (7%)
Query: 451 GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 510
G SC+LFGI L + A S V++ E + I D+D + K K+
Sbjct: 667 GNSCKLFGIHLDSPAKSEPLKSPPSVATPAAEKWMADGI----DADKSPEPHKTPKQLGA 722
Query: 511 EQV----QVSPKESQSKQ--SCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEE 564
QV + P+ S+ Q S S RS KV QG+A+GR++DLT GY L+ EL+E
Sbjct: 723 TQVDPVPERCPQASRGTQCKSQGGSTRSCKKVHKQGMALGRSVDLTKFNGYTELVAELDE 782
Query: 565 MFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPW 597
MFD G+L +K W +VYTD EGDMMLVGDDPW
Sbjct: 783 MFDFNGELKGCSKEWMVVYTDYEGDMMLVGDDPW 816
>gi|30027167|gb|AAP06759.1| auxin response factor-like protein [Mangifera indica]
Length = 840
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 210/332 (63%), Positives = 266/332 (80%), Gaps = 9/332 (2%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE-PT 59
+EQ+EASTNQ +Q++P++ L SKILCRV+N+ L A+ +TDEV+AQITLLPEP+Q+E
Sbjct: 64 IEQVEASTNQFADQQMPIYDLRSKILCRVINVQLKAKPDTDEVFAQITLLPEPNQDENAV 123
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
+P P PR VHSF K LTASDTSTHGGFSVLR+HA ECLP LDM+Q PTQ+LVAK
Sbjct: 124 EKEPPPPLLPRFHVHSFCKTLTASDTSTHGGFSVLRRHAEECLPELDMSQQPPTQDLVAK 183
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLHG EWRF+HIFRGQPRRHLL +GWS FV+SKRLVAGD F+FLR E EL VGVR R
Sbjct: 184 DLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRCEK-ELRVGVRRAMR 242
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNK 237
QQ ++PSSVISS SMHLGVLATA HAV+T TMF VYYKPR S +FI+ ++Y+E+V +
Sbjct: 243 QQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRISPAEFIVPFDQYMESVKSN 302
Query: 238 FAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRV 296
+++GM ++MRFEGE++PE+R++GT+VG+ED P W DSKWR LKV+WDE +++ RP+RV
Sbjct: 303 YSIGMGFEMRFEGEEAPEQRYTGTIVGIEDADPQRWPDSKWRCLKVRWDETSTVPRPERV 362
Query: 297 SPWEIEPFVASATPNLVQPV-LAKNKRPRLSM 327
SPW+IEP +A P + P+ L++ KRPR +M
Sbjct: 363 SPWKIEPALA---PLALNPLPLSRPKRPRSNM 391
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 118/202 (58%), Gaps = 17/202 (8%)
Query: 438 LLEQVETGRKTETGTS--CRLFGIELINHATSSAPSEKVPVSSLTTE-GHIISTISAAAD 494
L+E+ + + E G + C+LFGI L++ + + + +S+ GH+ + +
Sbjct: 609 LMEKPISVQHHEAGKTKDCKLFGIPLVSSSCVTPEPILLHQNSMNEPVGHMNHQL-GVLE 667
Query: 495 SDGKSDIAKE-----------FKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAV 543
SD KS+ +K + K + Q K+ SK S+RS TKV QG+A+
Sbjct: 668 SDPKSEQSKSPTLANDSNCVSEQGKPSQTCQPHVKDVHSKPQS-GSSRSCTKVHKQGIAL 726
Query: 544 GRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCN 602
GR++DL+ Y+ LI EL+ +F+ G+L T K W I+YTDDEGD+MLVGDDPW EFC
Sbjct: 727 GRSVDLSKFNNYEELIAELDRLFEFGGELMTPKKNWLIIYTDDEGDIMLVGDDPWKEFCG 786
Query: 603 MVKRIFICSSQDVKKMSPGSKL 624
MV++IFI + ++V+KM PGS L
Sbjct: 787 MVRKIFIYTREEVQKMKPGSSL 808
>gi|293337297|ref|NP_001169329.1| uncharacterized protein LOC100383196 [Zea mays]
gi|224028731|gb|ACN33441.1| unknown [Zea mays]
gi|407232688|gb|AFT82686.1| ARF28 ARF type transcription factor, partial [Zea mays subsp. mays]
gi|413916381|gb|AFW56313.1| hypothetical protein ZEAMMB73_567315 [Zea mays]
gi|413916382|gb|AFW56314.1| hypothetical protein ZEAMMB73_567315 [Zea mays]
Length = 813
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 209/351 (59%), Positives = 263/351 (74%), Gaps = 20/351 (5%)
Query: 1 MEQLEASTNQ-ELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPT 59
+EQ+EASTN +Q PL+ LP KI C+++N+ L AE +TDEVYAQ+TLLP+ Q+E T
Sbjct: 58 IEQVEASTNHLAEHQGTPLYNLPWKIPCKLMNMELKAEPDTDEVYAQLTLLPDKKQDENT 117
Query: 60 T-------------PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLD 106
+ P PA S ++HSF K LTASDTSTHGGFSVLR+HA ECLPPLD
Sbjct: 118 SARVENEEAEEEVVPHVPPATSEGLRIHSFCKTLTASDTSTHGGFSVLRRHADECLPPLD 177
Query: 107 MNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGE 166
M+Q P QELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV++KRLVAGD F+FLRGE
Sbjct: 178 MSQHPPNQELVAKDLHGVEWRFRHIFRGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGE 237
Query: 167 NGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFI 224
NGEL VGVR R Q+++PSSVISS SMHLGVLATA HAV T +MF VYYKPRTS +F+
Sbjct: 238 NGELRVGVRRALRHQTTIPSSVISSHSMHLGVLATAWHAVNTGSMFTVYYKPRTSPAEFV 297
Query: 225 ISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPH-WKDSKWRSLKVQ 283
+S +Y E++ +++GMR++MRFEGE++ E+RF+GT+VG+ P W DSKWRSLKV+
Sbjct: 298 VSRARYCESLKRNYSIGMRFRMRFEGEEAAEQRFTGTIVGICVSDPSGWADSKWRSLKVR 357
Query: 284 WDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDL 334
WDE +S+ RP+RVSPW+IEP V +P+ V P+ + KR R S+ P D+
Sbjct: 358 WDEASSVPRPERVSPWQIEPAV---SPSPVNPLPVRFKRSRSSVNASPSDV 405
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 103/173 (59%), Gaps = 22/173 (12%)
Query: 451 GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 510
GTS +LFGI L +P + P+ S + + ++ D++ + E + Q
Sbjct: 620 GTSFKLFGIPL------GSPEKSEPLVSPPSVAYDGKLQTSPTDNN---EPCSEATQNIQ 670
Query: 511 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 570
+VQ S S RS KV QG A+GR++DLT YD LI EL++MFD G
Sbjct: 671 NKVQSS------------STRSCKKVHKQGSALGRSIDLTKFACYDELIAELDQMFDFDG 718
Query: 571 QLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 622
+L + + W +VYTD+EGDMMLVGDDPW+EFC+MV +IFI + ++V++M+PG+
Sbjct: 719 ELKSPCRNWLVVYTDNEGDMMLVGDDPWNEFCDMVHKIFIYTREEVERMNPGA 771
>gi|413916383|gb|AFW56315.1| hypothetical protein ZEAMMB73_567315 [Zea mays]
Length = 826
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 209/351 (59%), Positives = 263/351 (74%), Gaps = 20/351 (5%)
Query: 1 MEQLEASTNQ-ELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPT 59
+EQ+EASTN +Q PL+ LP KI C+++N+ L AE +TDEVYAQ+TLLP+ Q+E T
Sbjct: 58 IEQVEASTNHLAEHQGTPLYNLPWKIPCKLMNMELKAEPDTDEVYAQLTLLPDKKQDENT 117
Query: 60 T-------------PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLD 106
+ P PA S ++HSF K LTASDTSTHGGFSVLR+HA ECLPPLD
Sbjct: 118 SARVENEEAEEEVVPHVPPATSEGLRIHSFCKTLTASDTSTHGGFSVLRRHADECLPPLD 177
Query: 107 MNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGE 166
M+Q P QELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV++KRLVAGD F+FLRGE
Sbjct: 178 MSQHPPNQELVAKDLHGVEWRFRHIFRGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGE 237
Query: 167 NGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFI 224
NGEL VGVR R Q+++PSSVISS SMHLGVLATA HAV T +MF VYYKPRTS +F+
Sbjct: 238 NGELRVGVRRALRHQTTIPSSVISSHSMHLGVLATAWHAVNTGSMFTVYYKPRTSPAEFV 297
Query: 225 ISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPH-WKDSKWRSLKVQ 283
+S +Y E++ +++GMR++MRFEGE++ E+RF+GT+VG+ P W DSKWRSLKV+
Sbjct: 298 VSRARYCESLKRNYSIGMRFRMRFEGEEAAEQRFTGTIVGICVSDPSGWADSKWRSLKVR 357
Query: 284 WDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDL 334
WDE +S+ RP+RVSPW+IEP V +P+ V P+ + KR R S+ P D+
Sbjct: 358 WDEASSVPRPERVSPWQIEPAV---SPSPVNPLPVRFKRSRSSVNASPSDV 405
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 103/173 (59%), Gaps = 22/173 (12%)
Query: 451 GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 510
GTS +LFGI L +P + P+ S + + ++ D++ + E + Q
Sbjct: 620 GTSFKLFGIPL------GSPEKSEPLVSPPSVAYDGKLQTSPTDNN---EPCSEATQNIQ 670
Query: 511 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 570
+VQ S S RS KV QG A+GR++DLT YD LI EL++MFD G
Sbjct: 671 NKVQSS------------STRSCKKVHKQGSALGRSIDLTKFACYDELIAELDQMFDFDG 718
Query: 571 QLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 622
+L + + W +VYTD+EGDMMLVGDDPW+EFC+MV +IFI + ++V++M+PG+
Sbjct: 719 ELKSPCRNWLVVYTDNEGDMMLVGDDPWNEFCDMVHKIFIYTREEVERMNPGA 771
>gi|357520595|ref|XP_003630586.1| Auxin response factor-like protein [Medicago truncatula]
gi|355524608|gb|AET05062.1| Auxin response factor-like protein [Medicago truncatula]
Length = 733
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 206/316 (65%), Positives = 252/316 (79%), Gaps = 6/316 (1%)
Query: 16 IPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVH 74
+P++ L KILCRV+N+ L AE +TDEV+AQ+TL+PEP+Q+E + PA PR VH
Sbjct: 1 MPVYDLRPKILCRVINVMLKAEPDTDEVFAQVTLVPEPNQDENAVEKEAPPAPPPRFHVH 60
Query: 75 SFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG 134
SF K LTASDTSTHGGFSVLR+HA ECLPPLDM++ PTQELVAKDLHG EWRF+HIFRG
Sbjct: 61 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHGNEWRFRHIFRG 120
Query: 135 QPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSM 194
QPRRHLL +GWS FV+SKRLVAGD F+FLRGENGEL VGVR RQQ ++PSSVISS SM
Sbjct: 121 QPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSM 180
Query: 195 HLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGED 252
HLGVLATA HAV T TMF VYYKPRTS +FI+ ++Y+E++ N + +GMR+KMRFEGE+
Sbjct: 181 HLGVLATAWHAVLTGTMFTVYYKPRTSPAEFIVPYDQYMESLKNNYTIGMRFKMRFEGEE 240
Query: 253 SPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPN 311
+PE+RF+GT+VG+ED S W SKWR LKV+WDE ++I RP+RVSPW+IEP A A P
Sbjct: 241 APEQRFTGTIVGIEDSDSKRWPTSKWRCLKVRWDETSNIPRPERVSPWKIEP--ALAPPA 298
Query: 312 LVQPVLAKNKRPRLSM 327
L + + KRPR ++
Sbjct: 299 LNPLPMPRPKRPRANV 314
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 77/216 (35%), Positives = 128/216 (59%), Gaps = 15/216 (6%)
Query: 420 PAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSL 479
P + + +PH + + + ++ K + + C+LFG L++ T PS ++
Sbjct: 489 PPPTQYESPHSRELSQKQMSAKISEAAKPKD-SDCKLFGFSLLSSPTMLEPSLSQRNATS 547
Query: 480 TTEGHI-ISTISAAADSDGKSDIAKEFK--------EKKQEQVQVSP---KESQSKQSCL 527
T H+ IS+ ++D KS+ +K K ++ ++Q+Q S K+ Q K
Sbjct: 548 ETSSHMQISSQHHTFENDQKSEHSKSSKPADKLVIVDEHEKQLQTSQPHVKDVQLKPQS- 606
Query: 528 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDE 586
S RS TKV +G+A+GR++DLT YD L EL+++F+ +G+L + K W +V+TD+E
Sbjct: 607 GSARSCTKVHKKGIALGRSVDLTKFSDYDELTAELDQLFEFRGELISPQKDWLVVFTDNE 666
Query: 587 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 622
GDMMLVGDDPW EFC+MV++I+I ++++KMSPG+
Sbjct: 667 GDMMLVGDDPWQEFCSMVRKIYIYPKEEIQKMSPGT 702
>gi|295844330|gb|ADG43162.1| auxin response factor 28 [Zea mays]
Length = 813
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 208/351 (59%), Positives = 263/351 (74%), Gaps = 20/351 (5%)
Query: 1 MEQLEASTNQ-ELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPT 59
+EQ+EASTN +Q PL+ LP KI C+++N+ L AE +TDEVYAQ+TLLP+ Q+E T
Sbjct: 58 IEQVEASTNHLAEHQGTPLYNLPWKIPCKLMNMELKAEPDTDEVYAQLTLLPDKKQDENT 117
Query: 60 T-------------PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLD 106
+ P PA S ++HSF K LTASDTSTHGGFSVLR+HA ECLPPLD
Sbjct: 118 SARVENEEAEEEVVPHVPPATSEGLRIHSFCKTLTASDTSTHGGFSVLRRHADECLPPLD 177
Query: 107 MNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGE 166
M+Q P QELVA+DLHG EWRF+HIFRGQPRRHLL +GWS FV++KRLVAGD F+FLRGE
Sbjct: 178 MSQHPPNQELVAQDLHGVEWRFRHIFRGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGE 237
Query: 167 NGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFI 224
NGEL VGVR R Q+++PSSVISS SMHLGVLATA HAV T +MF VYYKPRTS +F+
Sbjct: 238 NGELRVGVRRALRHQTTIPSSVISSHSMHLGVLATAWHAVNTGSMFTVYYKPRTSPAEFV 297
Query: 225 ISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPH-WKDSKWRSLKVQ 283
+S +Y E++ +++GMR++MRFEGE++ E+RF+GT+VG+ P W DSKWRSLKV+
Sbjct: 298 VSRARYCESLKRNYSIGMRFRMRFEGEEAAEQRFTGTIVGICVSDPSGWADSKWRSLKVR 357
Query: 284 WDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDL 334
WDE +S+ RP+RVSPW+IEP V +P+ V P+ + KR R S+ P D+
Sbjct: 358 WDEASSVPRPERVSPWQIEPAV---SPSPVNPLPVRFKRSRSSVNASPSDV 405
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 103/173 (59%), Gaps = 22/173 (12%)
Query: 451 GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 510
GTS +LFGI L +P + P+ S + + ++ D++ + E + Q
Sbjct: 620 GTSFKLFGIPL------GSPEKSEPLVSPPSVAYDGKLQTSPTDNN---EPCSEATQNIQ 670
Query: 511 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 570
+VQ S S RS KV QG A+GR++DLT YD LI EL++MFD G
Sbjct: 671 NKVQSS------------STRSCKKVHKQGSALGRSIDLTKFACYDELIAELDQMFDFDG 718
Query: 571 QLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 622
+L + + W +VYTD+EGDMMLVGDDPW+EFC+MV +IFI + ++V++M+PG+
Sbjct: 719 ELKSPCRNWLVVYTDNEGDMMLVGDDPWNEFCDMVHKIFIYTREEVERMNPGA 771
>gi|449530666|ref|XP_004172315.1| PREDICTED: auxin response factor 1-like, partial [Cucumis sativus]
Length = 335
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 204/284 (71%), Positives = 238/284 (83%), Gaps = 3/284 (1%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
MEQLEAS +Q L Q++P F LPSKILC+VVN+ L AE +TDEVYAQITLLPE +QNE T+
Sbjct: 52 MEQLEASMHQGLEQQMPSFNLPSKILCKVVNVVLRAESDTDEVYAQITLLPESNQNEVTS 111
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
PDP + R VHSF K LTASDTSTHGGFSVLR+HA +CLPPLDM+Q P QELVA D
Sbjct: 112 PDPPLPEPTRCNVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATD 171
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
LHG +W F+HIFRGQPRRHLLTTGWS FV+SK+LVAGD F+FLRGENGEL VGVR L RQ
Sbjct: 172 LHGNQWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQ 231
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKF 238
++MPSSVISS SMHLGVLATASHA++T T+F V+YKPRTS+ F++SLNKYLEA N+K
Sbjct: 232 LNNMPSSVISSHSMHLGVLATASHAISTGTLFSVFYKPRTSRSTFLVSLNKYLEAQNHKL 291
Query: 239 AVGMRYKMRFEGEDSPERRFSGTVVGVED-FSPHWKDSKWRSLK 281
+VGMR+KMRFEGE+ PER FSGT+VG+ D SP W +S+WRSLK
Sbjct: 292 SVGMRFKMRFEGEEVPERSFSGTIVGLGDNASPGWANSEWRSLK 335
>gi|42571255|ref|NP_973701.1| auxin response factor 11 [Arabidopsis thaliana]
gi|330255621|gb|AEC10715.1| auxin response factor 11 [Arabidopsis thaliana]
Length = 514
Score = 417 bits (1072), Expect = e-113, Method: Compositional matrix adjust.
Identities = 200/274 (72%), Positives = 229/274 (83%), Gaps = 2/274 (0%)
Query: 57 EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQEL 116
EPT+ DP + +P V SF K+LTASDTSTHGGFSVLRKHATECLP LDM Q TPTQEL
Sbjct: 18 EPTSLDPPLVEPAKPTVDSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQPTPTQEL 77
Query: 117 VAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRC 176
VA+DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGD FVFLRGE G+L VGVR
Sbjct: 78 VARDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGETGDLRVGVRR 137
Query: 177 LARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNN 236
LA+QQS+MP+SVISSQSM LGVLATASHAV T T+FVV+YKPR SQFIIS+NKY+ A+ N
Sbjct: 138 LAKQQSTMPASVISSQSMRLGVLATASHAVTTTTIFVVFYKPRISQFIISVNKYMMAMKN 197
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRV 296
F++GMRY+MRFEGE+SPER F+GT++G D S W SKWRSL++QWDEP+SI RP++V
Sbjct: 198 GFSLGMRYRMRFEGEESPERIFTGTIIGSGDLSSQWPASKWRSLQIQWDEPSSIQRPNKV 257
Query: 297 SPWEIEPFVASA-TPNLVQPVLAKNKRPRLSMEV 329
SPWEIEPF SA TP Q +K+KR R E+
Sbjct: 258 SPWEIEPFSPSALTPTPTQQ-QSKSKRSRPISEI 290
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 113/189 (59%), Gaps = 27/189 (14%)
Query: 452 TSCRLFGIELINH-ATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 510
+SCRLFG +L + A+++ P +K +IS S +DS K +
Sbjct: 346 SSCRLFGFDLTSKPASATIPHDK----------QLISVDSNISDSTTKC---------QD 386
Query: 511 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 570
SPKE + + TS RSR KVQMQG AVGRA+DLT L YD LI ELE+MF+I+G
Sbjct: 387 PNSSNSPKEQKQQ----TSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEG 442
Query: 571 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIE 630
+L + KW IV+TDDEGD MLVGDDPW+EFC M K++FI S +VKKM S + +
Sbjct: 443 ELSPKDKWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEVKKMRSKS---LLGDK 499
Query: 631 GEDILLSSD 639
G + L SD
Sbjct: 500 GTIVNLESD 508
>gi|108864433|gb|ABG22497.1| Auxin response factor 2, putative, expressed [Oryza sativa Japonica
Group]
Length = 771
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 197/295 (66%), Positives = 237/295 (80%), Gaps = 9/295 (3%)
Query: 18 LFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPT------TPDPCPADSPRP 71
L+ LP KILC V+N+ L AE +TDEVYAQ+TLLPE Q E P A RP
Sbjct: 3 LYNLPWKILCEVMNVELKAEPDTDEVYAQLTLLPESKQQEDNGSTEEEVPSAPAAGHVRP 62
Query: 72 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 131
+VHSF K LTASDTSTHGGFSVLR+HA ECLPPLDM++ PTQELVAKDLHG EWRF+HI
Sbjct: 63 RVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHI 122
Query: 132 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISS 191
FRGQPRRHLL +GWS FV++KRLVAGD F+FLRGENGEL VGVR RQQ+++PSSVISS
Sbjct: 123 FRGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISS 182
Query: 192 QSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFE 249
SMHLGVLATA HAV T TMF VYYKPRTS +F++ ++Y+E++ +++GMR+KMRFE
Sbjct: 183 HSMHLGVLATAWHAVNTGTMFTVYYKPRTSPAEFVVPYDRYMESLKQNYSIGMRFKMRFE 242
Query: 250 GEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEP 303
GE++PE+RF+GT+VG+ D P W +SKWRSLKV+WDE +SI RP+RVSPW+IEP
Sbjct: 243 GEEAPEQRFTGTIVGMGDSDPAGWPESKWRSLKVRWDEASSIPRPERVSPWQIEP 297
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 110/184 (59%), Gaps = 12/184 (6%)
Query: 451 GTSCRLFGIELINHATS---SAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKE 507
G SC+LFGI L + A S +PS V + T G + + SD +K K
Sbjct: 552 GASCKLFGIHLDSPAKSEPLKSPSSVVYDGTPQTPGATEWRRPDVTEVEKCSDPSKAMKP 611
Query: 508 KKQEQVQVSPKESQSKQ-----SCLT---SNRSRTKVQMQGVAVGRALDLTTLVGYDHLI 559
Q P++ S+Q SC + S RS KV QG+A+GR++DLT GY+ LI
Sbjct: 612 LDTPQPDSVPEKPSSQQASRNMSCKSQGVSTRSCKKVHKQGIALGRSVDLTKFNGYEELI 671
Query: 560 DELEEMFDIKGQLHT-RTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 618
EL++MFD G+L + +W +VYTD+EGDMMLVGDDPW EFC+MV +IFI + ++V++M
Sbjct: 672 AELDDMFDFNGELKGPKKEWMVVYTDNEGDMMLVGDDPWIEFCDMVHKIFIYTREEVQRM 731
Query: 619 SPGS 622
+PG+
Sbjct: 732 NPGT 735
>gi|222617072|gb|EEE53204.1| hypothetical protein OsJ_36082 [Oryza sativa Japonica Group]
Length = 826
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/372 (58%), Positives = 260/372 (69%), Gaps = 48/372 (12%)
Query: 3 QLEASTNQELNQR-IPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQN----- 56
Q+EASTNQ Q+ PL+ LP KI C+V+N+ L AE +TDEVYAQ+TLLPE Q+
Sbjct: 27 QVEASTNQVAEQQGAPLYNLPWKIPCKVMNVELKAEPDTDEVYAQLTLLPEKQQDGNGSG 86
Query: 57 -----------EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPL 105
E P PA + RP+VHSF K LTASDTSTHGGFSVLR+HA ECLPPL
Sbjct: 87 NGNVSKDKVEEEEVVP---PAATERPRVHSFCKTLTASDTSTHGGFSVLRRHADECLPPL 143
Query: 106 -------------------DMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 146
DM+Q PTQELVAKDLHG EWRF+HIFRGQPRRHLL +GWS
Sbjct: 144 YSFFDRLIVAMPLTSLLDQDMSQHPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSGWS 203
Query: 147 TFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAV 206
FV++KRLVAGD F+FLRGENGEL VGVR RQQ+++PSSVISS SMHLGVLATA HAV
Sbjct: 204 VFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQANIPSSVISSHSMHLGVLATAWHAV 263
Query: 207 ATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVG 264
T TMF VYYKPRT S+F++ + Y E++ ++GMR+KM FEGE++ E+RF+GT+VG
Sbjct: 264 NTGTMFTVYYKPRTSPSEFVVPRDLYKESLKRNHSIGMRFKMTFEGEEAAEQRFTGTIVG 323
Query: 265 VEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLA---KN 320
V D P W DSKWRSLKV+WDE AS+ RPDRVSPW+IEP + +P+ V P+ A K
Sbjct: 324 VGDSDPSGWADSKWRSLKVRWDEAASVPRPDRVSPWQIEP---ANSPSPVNPLPAPRTKR 380
Query: 321 KRPRLSMEVPPL 332
RP + P L
Sbjct: 381 ARPNVLASSPDL 392
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 146/282 (51%), Gaps = 35/282 (12%)
Query: 366 NHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHS-- 423
NH + S N+ F Q+ +L +P + Q+ N ++ AH
Sbjct: 519 NHNMYPGTWSLMPPNTGFGVNQQN---YLMTPDITLPQRSLNAKFGGNGAFTSLRAHGID 575
Query: 424 -------GHSTP--HPSKPNNDTLLEQ---VETGRKTETGTSCRLFGIELINHATSSAPS 471
GH P H ++ + Q ++ + G+SC LFGI L + A P
Sbjct: 576 QRSSGWLGHIEPSSHIDDASSSLIKPQPLVIDHNVQKAKGSSCMLFGISLDSPAK---PE 632
Query: 472 EKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFK-------EKKQEQVQVSP---KESQ 521
+ S+ +G + A + D SD +K K + +E+ Q P K Q
Sbjct: 633 LLISPPSVAFDGKLQQD---ALEEDECSDPSKTVKPLDGAQHDSAREKHQSCPDGTKNIQ 689
Query: 522 SKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEI 580
SKQ S+RS KV QG+A+GR++DLT YD LI EL++MFD G+L++ +K W +
Sbjct: 690 SKQQN-GSSRSCKKVHKQGIALGRSIDLTKFTCYDELIAELDQMFDFNGELNSSSKNWMV 748
Query: 581 VYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 622
VYTD+EGDMMLVGDDPW+EFCNMV +IFI + ++V+KM+PG+
Sbjct: 749 VYTDNEGDMMLVGDDPWNEFCNMVHKIFIYTREEVQKMNPGA 790
>gi|226491161|ref|NP_001142391.1| uncharacterized protein LOC100274564 [Zea mays]
gi|223975541|gb|ACN31958.1| unknown [Zea mays]
Length = 766
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 205/345 (59%), Positives = 256/345 (74%), Gaps = 13/345 (3%)
Query: 18 LFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP----RPKV 73
+ LP KILC V+N+ L AE + DEVYAQ+TLLPE E + + PA P RP+V
Sbjct: 3 FYDLPWKILCEVMNVELKAEPDNDEVYAQLTLLPESKPEENGSSEEMPASPPAALARPRV 62
Query: 74 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 133
HSF K LTASDTSTHGGFSVLR+HA ECLPPLDM + PTQELVAKDLHG EWRF+HIFR
Sbjct: 63 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIFR 122
Query: 134 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQS 193
GQPRRHLL +GWS FV++KRLVAGD F+FLRG++GEL VGVR RQQ+++PSSVISS S
Sbjct: 123 GQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSHS 182
Query: 194 MHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGE 251
MHLGVLATA HAV T TMF VYYKPRTS +F++ ++Y+E++ + +GMR+KMRFEGE
Sbjct: 183 MHLGVLATAWHAVNTGTMFTVYYKPRTSPAEFVVPCDRYMESLKRNYPIGMRFKMRFEGE 242
Query: 252 DSPERRFSGTVVG-VEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP 310
++PE+RF+GT+VG V+ W +SKWR LKV+WDE +SI RP+RVSPW+IEP V +P
Sbjct: 243 EAPEQRFTGTIVGNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAV---SP 299
Query: 311 NLVQPV-LAKNKRPRLS--MEVPPLDLPSAASAPWSARLAQSHNL 352
+ P+ + + KRPR + +P P+ +AP Q H L
Sbjct: 300 PPINPLPVHRPKRPRSNAVASLPESSAPTKEAAPKVTLETQQHAL 344
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/179 (42%), Positives = 107/179 (59%), Gaps = 11/179 (6%)
Query: 451 GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 510
G SC+LFGI L + A S V++ E + I D+D + K K+
Sbjct: 551 GNSCKLFGIHLDSPAKSEPLKSPPSVATPAAEKWMADGI----DADKSPEPHKTPKQLGA 606
Query: 511 EQV----QVSPKESQSKQ--SCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEE 564
QV + P+ S+ Q S S RS KV QG+A+GR++DLT GY L+ EL+E
Sbjct: 607 TQVDPVPERCPQASRGTQCKSQGGSTRSCKKVHKQGMALGRSVDLTKFNGYTELVAELDE 666
Query: 565 MFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 622
MFD G+L +K W +VYTD EGDMMLVGDDPW+EFC+MV +IF+ + ++V++M+PG+
Sbjct: 667 MFDFNGELKGCSKEWMVVYTDYEGDMMLVGDDPWNEFCSMVHKIFVYTREEVQRMNPGA 725
>gi|255543190|ref|XP_002512658.1| transcription factor, putative [Ricinus communis]
gi|223548619|gb|EEF50110.1| transcription factor, putative [Ricinus communis]
Length = 787
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 208/336 (61%), Positives = 255/336 (75%), Gaps = 7/336 (2%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
+EQ+EASTNQ ++++P + LP KILCRVVN+ L AE +TDEV+AQITLLP+ Q+E
Sbjct: 49 IEQVEASTNQAADEQMPAYDLPGKILCRVVNVQLKAEPDTDEVFAQITLLPQSEQDENLV 108
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
RP+VHSF K LTASDTSTHGGFSVLR+HA ECLPPLDM+ P QELVAKD
Sbjct: 109 EKKALPAPTRPRVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSLQPPAQELVAKD 168
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
L G EWRF+HIFRGQPRRHLL +GWS FV++K+LVAGD F+FLRGE GEL VGVR RQ
Sbjct: 169 LLGNEWRFRHIFRGQPRRHLLQSGWSLFVSAKKLVAGDAFIFLRGETGELRVGVRRAMRQ 228
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKF 238
++PSS +SS SMH+G+LATA HAV+T TMF VYYKPRTS +FII ++KY+E+V N F
Sbjct: 229 SCNVPSSFMSSHSMHIGILATAWHAVSTGTMFTVYYKPRTSPAEFIIPMDKYMESVKNNF 288
Query: 239 AVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVS 297
+GMR+KMRFE E++PE+RF GTV+GVE P W S+WR LKV+WDE +S+ RPDRVS
Sbjct: 289 TIGMRFKMRFEAEEAPEQRFLGTVIGVEHADPKRWPTSRWRCLKVRWDETSSLHRPDRVS 348
Query: 298 PWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLD 333
PWE+EP +A P P + KR R +M +P D
Sbjct: 349 PWEVEPALAPLDP---LPT-CRLKRSRSNMPMPSAD 380
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 111/194 (57%), Gaps = 23/194 (11%)
Query: 447 KTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHII----STISAAADS--DGKSD 500
K++ +C+LFGI LI S VP+ + T + + + + A+D D SD
Sbjct: 584 KSKEDGNCKLFGISLI--------SSPVPMENATVDNNFMHRPQGLFNLASDKLQDFGSD 635
Query: 501 IA-KEFKEKKQEQVQVSPKE------SQSKQSCLTSNRSR-TKVQMQGVAVGRALDLTTL 552
++ ++ K+ K + +E S + L + +R KV QG+AVGR +DLT
Sbjct: 636 LSLQQLKKPKFFDSTIRCEEEKLFMASHFIEGKLQNGSTRCVKVHKQGIAVGRYVDLTKF 695
Query: 553 VGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICS 611
GY+ LI EL+ +F+ G+L T K W I +TDDEGDMMLVGDDPW EFC+MV+RIF+ +
Sbjct: 696 NGYNELIAELDRIFEFSGELITSNKNWLIAFTDDEGDMMLVGDDPWEEFCSMVRRIFVYT 755
Query: 612 SQDVKKMSPGSKLP 625
+++ +M+ S P
Sbjct: 756 REEINRMNQRSLNP 769
>gi|218186846|gb|EEC69273.1| hypothetical protein OsI_38317 [Oryza sativa Indica Group]
Length = 840
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 215/364 (59%), Positives = 258/364 (70%), Gaps = 41/364 (11%)
Query: 4 LEASTNQELNQR-IPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEP--------- 53
+EASTNQ Q+ PL+ LP KI C+V+N+ L AE +TDEVYAQ+TLLPE
Sbjct: 49 VEASTNQVAEQQGAPLYNLPWKIPCKVMNVELKAEPDTDEVYAQLTLLPEKWYGNVSKDK 108
Query: 54 SQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPL-------- 105
+ E P PA + RP+VHSF K LTASDTSTHGGFSVLR+HA ECLPPL
Sbjct: 109 VEEEEVVP---PAATERPRVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLYSFFDRLI 165
Query: 106 -----------DMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 154
DM+Q PTQELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV++KRL
Sbjct: 166 VAMPLTSLLDQDMSQHPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSGWSVFVSAKRL 225
Query: 155 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 214
VAGD F+FLRGENGEL VGVR RQQ+++PSSVISS SMHLGVLATA HAV T TMF V
Sbjct: 226 VAGDAFIFLRGENGELRVGVRRAMRQQANIPSSVISSHSMHLGVLATAWHAVNTGTMFTV 285
Query: 215 YYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPH- 271
YYKPRT S+F++ + Y E++ ++GMR+KM FEGE++ E+RF+GT+VGV D P
Sbjct: 286 YYKPRTSPSEFVVPRDLYKESLKRNHSIGMRFKMTFEGEEAAEQRFTGTIVGVGDSDPSG 345
Query: 272 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLA---KNKRPRLSME 328
W DSKWRSLKV+WDE AS+ RPDRVSPW+IEP + +P+ V P+ A K RP +
Sbjct: 346 WADSKWRSLKVRWDEAASVPRPDRVSPWQIEP---ANSPSPVNPLPAPRTKRARPNVLAS 402
Query: 329 VPPL 332
P L
Sbjct: 403 SPDL 406
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/183 (44%), Positives = 113/183 (61%), Gaps = 18/183 (9%)
Query: 451 GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFK---- 506
G+SC LFGI L + A P + S+ +G + A + D SD +K K
Sbjct: 629 GSSCMLFGISLDSPAK---PELLISPPSVAFDGKLQQD---ALEEDECSDPSKTVKPLDG 682
Query: 507 ---EKKQEQVQVSP---KESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLID 560
+ E+ Q P K QSKQ S+RS KV QG+A+GR++DLT YD LI
Sbjct: 683 AQHDSATEKHQSCPDGTKNIQSKQQN-GSSRSCKKVHKQGIALGRSIDLTKFTCYDELIA 741
Query: 561 ELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
EL++MFD G+L++ +K W +VYTD+EGDMMLVGDDPW+EFCNMV +IFI + ++V+KM+
Sbjct: 742 ELDQMFDFNGELNSSSKNWMVVYTDNEGDMMLVGDDPWNEFCNMVHKIFIYTREEVQKMN 801
Query: 620 PGS 622
PG+
Sbjct: 802 PGA 804
>gi|224072482|ref|XP_002303753.1| predicted protein [Populus trichocarpa]
gi|222841185|gb|EEE78732.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 198/311 (63%), Positives = 245/311 (78%), Gaps = 5/311 (1%)
Query: 1 MEQLEASTNQELN-QRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQN-EP 58
+EQ+EASTNQ + Q++P + L KILCRVVN+ L AE +TDEV+AQ+ LLPE Q+ E
Sbjct: 23 IEQVEASTNQVADDQQMPAYNLSPKILCRVVNVQLKAELDTDEVFAQVILLPETQQDVEL 82
Query: 59 TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
+ P RP+VHSF K+LTASDTSTHGGFSVL++HA ECLPPLDM+ P QELVA
Sbjct: 83 VEEEDLPPLPARPRVHSFCKMLTASDTSTHGGFSVLKRHADECLPPLDMSLQPPVQELVA 142
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
KDLHG EWRF+HIFRGQPRRHLL +GWS FV++K+LVAGD F+FLRGE EL VGVR
Sbjct: 143 KDLHGNEWRFRHIFRGQPRRHLLQSGWSLFVSAKKLVAGDAFIFLRGETEELRVGVRRAL 202
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNN 236
RQ S +PSS+ISS SMH+G+LATA HAV+T +MF VYYKPRTS +FII ++KY+E+V
Sbjct: 203 RQPSKIPSSLISSHSMHIGILATAWHAVSTGSMFTVYYKPRTSPAEFIIPVDKYMESVKI 262
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+A+GMR+KMRFE +D+PE+RFSGTV+GVE+ P W S WR LKV WDE + + RPDR
Sbjct: 263 NYAIGMRFKMRFEADDAPEQRFSGTVIGVEEADPKKWPRSNWRCLKVHWDETSPVHRPDR 322
Query: 296 VSPWEIEPFVA 306
VSPW++EP +A
Sbjct: 323 VSPWKVEPALA 333
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/225 (34%), Positives = 117/225 (52%), Gaps = 18/225 (8%)
Query: 426 STPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHI 485
S+PHPS+ L Q + +T + +LFG+ L ++ + P+ + S H
Sbjct: 497 SSPHPSRSKPKHLPFQ-QCNERTAKDDNYKLFGVSLFRNSKALEPA-TIHRHSADKPQHQ 554
Query: 486 ISTISAAADSDGKSDIAKEFKEKKQEQVQ----------VSPKESQSKQSCLTSNRSRTK 535
I+ S G ++ K K + + + K+ Q K ++ R K
Sbjct: 555 INVASDHLQLLGSDRYLEQLKHPKHARCEEQENIFQASSLYSKDVQGKPEGGSARRC-VK 613
Query: 536 VQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGD 594
V QG AVGR+LDL+ GY+ L EL+++F+ G+L K W IV+TDDE DMMLVGD
Sbjct: 614 VHKQGTAVGRSLDLSKFNGYNELTAELDQIFEFNGELVAPNKDWLIVFTDDEDDMMLVGD 673
Query: 595 DPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGEDILLSSD 639
DPW EFC+MV+RIFI + +++ +M P S ++E E S+D
Sbjct: 674 DPWQEFCSMVRRIFIYTKEEINRMEPRS----LNLEAEGNSRSTD 714
>gi|63095201|gb|AAY32331.1| ARF1 [Phyllostachys praecox]
Length = 362
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 200/311 (64%), Positives = 245/311 (78%), Gaps = 11/311 (3%)
Query: 1 MEQLEASTNQELNQR-IPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPT 59
+EQ+EASTNQ Q+ PL+ LP KI C+V+N+ L AEQ+TDEVYAQ+TLLPE Q+E
Sbjct: 52 IEQVEASTNQVAEQQGTPLYNLPWKIPCKVMNVELKAEQDTDEVYAQLTLLPEKKQDENV 111
Query: 60 T-------PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTP 112
+ PD PA + R +VHSF K LTASDTSTHGGFSVLR+HA ECLPPLDM+Q P
Sbjct: 112 SKEEEEVVPDAPPAVAERTRVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPP 171
Query: 113 TQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHV 172
TQELVAKDLHG EW F+HIFRGQPRRHLL +GWS FV++KRLVAGD F+FLRGENGEL V
Sbjct: 172 TQELVAKDLHGVEWPFRHIFRGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRV 231
Query: 173 GVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKY 230
GVR RQ++++PSSVISS SMHLGVLATA H T TMF VYYKPRTS +F++ + +
Sbjct: 232 GVRRAMRQRANIPSSVISSHSMHLGVLATAWHVANTGTMFTVYYKPRTSPAEFVVPRDWF 291
Query: 231 LEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPAS 289
E++ ++GMR+KMRFEGE++ E+RF+GT+VG+ D P W DSKWRSLKV+WDE +S
Sbjct: 292 DESLKRNHSIGMRFKMRFEGEEAAEQRFTGTIVGIGDSDPSGWVDSKWRSLKVRWDEASS 351
Query: 290 ITRPDRVSPWE 300
+ RP+RVSPW+
Sbjct: 352 VPRPERVSPWQ 362
>gi|414877786|tpg|DAA54917.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
Length = 750
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/356 (57%), Positives = 256/356 (71%), Gaps = 27/356 (7%)
Query: 30 VNIHLMAEQETDEVYAQITLLPEPSQNEPTT----------PDPCPADSPRPKVHSFSKV 79
+NI L E +TDEVYAQ+TLLP+ Q+E T+ P PA + P +HSF K
Sbjct: 1 MNIELKVEPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGPHIHSFCKT 60
Query: 80 LTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRH 139
LTASDTSTHGGFSVLR+HA ECLPPLDM+Q P QELVAKDLHG EWRF+HIFRGQPRRH
Sbjct: 61 LTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFRGQPRRH 120
Query: 140 LLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVL 199
LL +GWS FV++KRLVAGD F+FLRGENGEL VGVR R Q+++PSSVISS +MHLGVL
Sbjct: 121 LLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVISSHNMHLGVL 180
Query: 200 ATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR 257
ATA HAV T +MF VYYKPRTS +F++S ++Y E++ +++GMR+KMRFEGE++ E+R
Sbjct: 181 ATAWHAVNTDSMFTVYYKPRTSPAEFVVSRDRYYESLKRNYSIGMRFKMRFEGEEAAEQR 240
Query: 258 FSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 316
F+GT+VG+ P W DSKWRSLKV+WDEP+SI+RP+RVSPW+IEP S +P V P+
Sbjct: 241 FTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEP---SVSPCHVNPL 297
Query: 317 LAKNKRPRLSMEVPPLDLPSAASAPWSARLAQS---------HN--LTQLSVTAED 361
+ KR R S+ P D+ + S +A S HN TQL+V D
Sbjct: 298 PVRFKRSRSSVNALPSDVSTVTREVTSKVMADSQQNSLTRALHNQGRTQLTVRYHD 353
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 115/197 (58%), Gaps = 25/197 (12%)
Query: 445 GRKTETGTSCRLFGIELINHATSSAPSEKVPV---SSLTTEGHIISTISAAADS------ 495
G + GTS +LFGI L +P + P+ S+ +G + ++ S +
Sbjct: 524 GVQKSKGTSFKLFGIPL------GSPEKSEPLVSPPSVAYDGKLQTSPSEKGNQLDVVEV 577
Query: 496 DGKSDIAKEFK-------EKKQEQVQVSPKESQSKQSCL--TSNRSRTKVQMQGVAVGRA 546
D S +K K + E Q SP+ + + Q+ + +S RS KV QG A+GR+
Sbjct: 578 DNCSHPSKTVKPLDGPQSDSITENNQPSPEATLNIQNKVQSSSTRSCKKVHKQGSALGRS 637
Query: 547 LDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVK 605
+DLT YD LI EL++MFD G+L + K W +VYTD+EGD+MLVGDDPW+EFC+MV
Sbjct: 638 IDLTKFACYDELIAELDQMFDFDGELKSPCKSWLVVYTDNEGDIMLVGDDPWNEFCDMVH 697
Query: 606 RIFICSSQDVKKMSPGS 622
+IFI + ++V++M+PG+
Sbjct: 698 KIFIYTREEVERMNPGA 714
>gi|87241206|gb|ABD33064.1| Transcriptional factor B3; Auxin response factor;
Aux/IAA_ARF_dimerisation [Medicago truncatula]
Length = 810
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 258/681 (37%), Positives = 372/681 (54%), Gaps = 79/681 (11%)
Query: 16 IPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQN----EPTTPDPCPAD---- 67
IP + L +ILCRVVN+ L+A +E DEVY Q+ LLP+ + P+ AD
Sbjct: 97 IPTYGLQPQILCRVVNVQLLANKENDEVYTQVALLPQAELAGMCLDDKEPEGLEADDEGN 156
Query: 68 --SP-RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGY 124
SP + H F K LTASDTSTHGGFSV R+ A +C PPLD Q P+QELVAKDLHG
Sbjct: 157 GRSPTKLASHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGV 216
Query: 125 EWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSM 184
W+F+HI+RGQPRRHLLTTGWS FV+ K LV+GD +FLRGENGEL +G+R AR ++ +
Sbjct: 217 GWKFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGENGELRLGIRRAARPRNGL 276
Query: 185 PSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGM 242
P S+I +QS L++ ++A++ ++MF V+Y PR S F++ KY +++ N +G
Sbjct: 277 PESIIGNQSCSPSFLSSVANAISAKSMFHVFYSPRASHADFVVPYQKYAKSIRNPVTIGT 336
Query: 243 RYKMRFEGEDSPERRF-SGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWE 300
R+KM+FE ++SPERR SG V G+ D P+ W SKWR L V+WDE DRVSPWE
Sbjct: 337 RFKMKFEMDESPERRCSSGIVTGMSDLDPYKWPKSKWRCLMVRWDEDIGANHQDRVSPWE 396
Query: 301 IEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPW-------SARLAQSHNLT 353
I+P + N+ K R L +E P + + S S+++ Q T
Sbjct: 397 IDPSTSLPPLNIQSSRRLKKLRTGLHVESPSHFITAGDSGFMDFDESIRSSKVLQGQEKT 456
Query: 354 QL--------SVTAEDKRIDNHVAWHHKHSDFSSN------SNFMSRTQSDG-----EWL 394
+VT + + N + +H++ +SN S+ +R Q E
Sbjct: 457 SFMSLYYGCDTVTKQKEFDINSL----RHTNLASNGARKITSSEFTRIQPSSYADFTEMN 512
Query: 395 TSPRVKFSQQLFQEAIDDNK---NISAWP----AHSGHSTPHPSKPNNDTLLEQVETG-- 445
PRV +Q+++ K N+++W +++ ++ + +K N +L +V
Sbjct: 513 RFPRVLQAQEIYPLRSLTGKVDLNLNSWGKTNVSYTKYNLHNATKLNFHSLGSEVLQNSS 572
Query: 446 ------RKTETGTSCRL-----FGIELINHATSS----APSEKVPVSS--LTTEGHIIST 488
K G+S F + ++ T S A +V +SS + E + +
Sbjct: 573 FPYGDIHKVGQGSSMLCSKPTNFQLGNVSFNTPSSQIGALRNEVGLSSFKIRNEQKLQND 632
Query: 489 ISAAADSDGKSDIAKE--FKEK----KQEQVQVSPKESQSKQSCLTS-NRSRTKVQMQGV 541
ISAA D I+ + FKE K +S + Q+ S RS TKV QG
Sbjct: 633 ISAATSLDANIRISNDENFKEMVNPCKLFGFSLSAAAETTSQNLQNSAKRSCTKVHKQGS 692
Query: 542 AVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEF 600
VGRA+DL+ L Y+ L+ ELE +F ++G L K W I+YTD E D+M+VGDDPWHEF
Sbjct: 693 LVGRAIDLSRLSSYNDLVSELERLFGMEGLLRDPDKGWRILYTDSENDIMVVGDDPWHEF 752
Query: 601 CNMVKRIFICSSQDVKKMSPG 621
C+MV +I I + ++V+KM+ G
Sbjct: 753 CDMVSKIHIYTQEEVEKMTIG 773
>gi|379323240|gb|AFD01319.1| auxin response factor 24 [Brassica rapa subsp. pekinensis]
Length = 540
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 229/616 (37%), Positives = 327/616 (53%), Gaps = 146/616 (23%)
Query: 2 EQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTP 61
E+L S N EL Q P+F +PSKI C V +I+L E T+++YA++ LLP+ S E P
Sbjct: 43 EKLVTSINDELCQLKPIFDIPSKICCNVFSINLKVENNTNDIYAEVALLPDTSDVEIPIP 102
Query: 62 DPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDL 121
++ ++ F+KVL+ASDT GGF + ++HA ECLP LDM+Q TP+QE++AKD+
Sbjct: 103 ---KNENNIQNINYFTKVLSASDTCKTGGFVLYKRHAMECLPLLDMSQLTPSQEIIAKDI 159
Query: 122 HGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQ 181
HG++W FKH LRGENGE VG+ A Q+
Sbjct: 160 HGHKWSFKHT-------------------------------LRGENGESRVGISRAAHQE 188
Query: 182 SSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVG 241
++P+S IS QSMH GV+ATA + + + MFVV+YKPR+SQF+++ +K+++ VNNKF++G
Sbjct: 189 RNIPTSSISKQSMHHGVVATALNTIKNKCMFVVFYKPRSSQFLVNFDKFVDRVNNKFSIG 248
Query: 242 MRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEI 301
++ M+FEG+D E R++GT+VGV DFS HWKDS+WRSLKVQWD A+I RPD+V
Sbjct: 249 SKFSMKFEGKDLNETRYNGTIVGVGDFSTHWKDSEWRSLKVQWDGTATIPRPDKV----- 303
Query: 302 EPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSAR-LAQSHNLTQLSVTAE 360
+PW L QS N+++
Sbjct: 304 --------------------------------------SPWEIEMLTQSSNISKSDYLKN 325
Query: 361 DKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWP 420
++ID + S S T S G+ P ++ S +
Sbjct: 326 KRQIDV----------YEFGSKMWSPTLSQGQESGQPSIQSSMRY--------------- 360
Query: 421 AHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLT 480
ST + N+ + + ++ T TSCRLFG++L+N AT+ P E +
Sbjct: 361 ---SFSTMY-----NEQMAQAMKETSTTTATTSCRLFGVDLVNPATTKDPVEPI------ 406
Query: 481 TEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQG 540
DS+ K I+K F+++K + VQ RS TKV M+G
Sbjct: 407 -------------DSNKKLKISKIFEDEKIDHVQA---------------RSHTKVHMEG 438
Query: 541 VAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEF 600
V + R +DLT GY LIDELE +FDIKG+LH KW++ + D+GDMM++GDDPW +F
Sbjct: 439 V-IERTVDLTIFDGYSQLIDELERLFDIKGELHMHNKWKMFFIYDDGDMMILGDDPWTKF 497
Query: 601 CNMVKRIFICSSQDVK 616
C M K IFICS + VK
Sbjct: 498 CYMAKEIFICSKKGVK 513
>gi|168022796|ref|XP_001763925.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684930|gb|EDQ71329.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 620
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 260/643 (40%), Positives = 345/643 (53%), Gaps = 76/643 (11%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
+EQ+ A+ + +++ LP+ +LCR+ I L A+ +TDEV+AQ+ L P+ ++ T
Sbjct: 34 IEQVRAADVYQASKQ--FSNLPAHLLCRISKIELQADPQTDEVFAQMDLTPQYELSKETK 91
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
P P + V SF K LTASDTSTHGGFSV R+ A ECLP LD N P QELVAKD
Sbjct: 92 DAPSPIQ--QSNVRSFCKTLTASDTSTHGGFSVPRRAAEECLPLLDHNMVPPCQELVAKD 149
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
LHG +W F+HI+RG PRRHLLTTGWS FV+ KRLVAGDT +FLRGENG+L VGVR ++Q
Sbjct: 150 LHGKDWSFRHIYRGHPRRHLLTTGWSVFVSQKRLVAGDTVIFLRGENGQLRVGVRRASKQ 209
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKF 238
Q S+ SS ++HLGVLA ASHA + F V Y PRT S+F+I +KYL + +N
Sbjct: 210 QPQARSTHFSSANLHLGVLAAASHAATERLRFSVIYNPRTSPSEFVIPYHKYLRSEDNNL 269
Query: 239 AVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVS 297
VG R+KM+FE E+S ERR+SGT+V + D P W S WRS+KV+WDE AS R +RVS
Sbjct: 270 TVGSRFKMKFETEESTERRYSGTIVEISDVDPLKWPSSAWRSMKVEWDESAS-ERHERVS 328
Query: 298 PWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSV 357
PWEIEP V +T L P + PR P D +S W++ +
Sbjct: 329 PWEIEPLVPIST--LPTPPVG----PRPKRRPPTFD----SSVSWASYMGTG-------- 370
Query: 358 TAEDKRIDNHVAWHHKHSDFSSNSNFMS-RTQSDGEWLTSPRVKFSQQLFQEAIDDNKNI 416
++ D S N S T S LTSP V QL +++++ +
Sbjct: 371 -------------AYQFRDPSCNKILPSWLTNSKSANLTSPPVPARSQLPITSLNNDPKV 417
Query: 417 SAWPAHSGH----STPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSE 472
AH+ T + N LEQ C+LFG L + +
Sbjct: 418 LH--AHNLSFELWETVEQEQLNASPALEQ-----------QCKLFGFNLADKVVPT---- 460
Query: 473 KVPVSSLTTEGHIISTISAAADSDGKSD-IAKEFKEKKQEQVQVSPKESQSKQSCLTSNR 531
PVSS S DS+G + + +V + + Q + R
Sbjct: 461 --PVSSAP---------SLCEDSEGSGPWSSSDHTSSTSADTRVGMIVTGTYQPLVAPVR 509
Query: 532 SRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMM 590
S TKV G VGR +DL Y L L +F ++GQL TK W++VYTD E D++
Sbjct: 510 SGTKVYYSG-KVGRTIDLKKCESYAALRRMLASLFGLEGQLDDVTKGWQLVYTDHENDVL 568
Query: 591 LVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGED 633
LVGDDPW EFCN V+ + + S QD S G K PM + + +D
Sbjct: 569 LVGDDPWEEFCNCVRSLKVLSPQDAAGQSVG-KYPMTNCDEDD 610
>gi|227202766|dbj|BAH56856.1| AT4G23980 [Arabidopsis thaliana]
Length = 297
Score = 390 bits (1003), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/253 (79%), Positives = 222/253 (87%), Gaps = 2/253 (0%)
Query: 1 MEQLEASTNQ-ELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQ-NEP 58
MEQLEAST Q +LN PLF LP KILC V+N+ L AE++TDEVYAQITL+P ++ +EP
Sbjct: 39 MEQLEASTQQVDLNTMKPLFVLPPKILCNVMNVSLQAEKDTDEVYAQITLIPVGTEVDEP 98
Query: 59 TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
+PDP P + RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDM Q TPTQELVA
Sbjct: 99 MSPDPSPPELQRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVA 158
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
+D+HGY+W+FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGEL VGVR
Sbjct: 159 EDVHGYQWKFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELRVGVRRAN 218
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKF 238
QQSSMPSSVISS SMHLGVLATA HA T+TMF+VYYKPRTSQFIISLNKYLEA++NKF
Sbjct: 219 LQQSSMPSSVISSHSMHLGVLATARHATQTKTMFIVYYKPRTSQFIISLNKYLEAMSNKF 278
Query: 239 AVGMRYKMRFEGE 251
+VGMR+KMR GE
Sbjct: 279 SVGMRFKMRLWGE 291
>gi|255540071|ref|XP_002511100.1| Auxin response factor, putative [Ricinus communis]
gi|223550215|gb|EEF51702.1| Auxin response factor, putative [Ricinus communis]
Length = 844
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 199/331 (60%), Positives = 248/331 (74%), Gaps = 14/331 (4%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE-PT 59
+EQ+EASTNQ +Q++P++ LPSKILCRV+N+ L AE +TDEV+AQ+TLLPEP Q+E
Sbjct: 82 IEQVEASTNQLADQQMPVYNLPSKILCRVINVQLKAEPDTDEVFAQVTLLPEPIQDENAV 141
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
DP PR VHSF K LTASDTSTHGGFSVLR+HA ECLPPL ST +
Sbjct: 142 KKDPPQPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLVSINSTEFVRCLID 201
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
+ + GQPRRHLL +GWS FV+SKRLVAGD F+FLRGENGEL VGVR R
Sbjct: 202 IIM--------LIPGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 253
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNK 237
QQ ++PSSVISS SMHLGVLATA HA++T T+F VYYKPRTS +FI+ ++Y+E+V N
Sbjct: 254 QQGNVPSSVISSHSMHLGVLATAWHAISTGTLFTVYYKPRTSPAEFIVPFDRYMESVKNN 313
Query: 238 FAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRV 296
+ +GMR+KMRFEGE++PE+RF+GT+VG+ED S W++SKWRSLKV+WDE ++I RPDRV
Sbjct: 314 YCIGMRFKMRFEGEEAPEQRFTGTIVGIEDADSKRWRESKWRSLKVRWDETSTIPRPDRV 373
Query: 297 SPWEIEPFVASATPNLVQPVLAKNKRPRLSM 327
SPW +EP A A P L + + KRPR +M
Sbjct: 374 SPWSVEP--ALAPPALNPLPVPRPKRPRSNM 402
Score = 132 bits (331), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 83/214 (38%), Positives = 126/214 (58%), Gaps = 18/214 (8%)
Query: 439 LEQVETGRKTETGTSCRLFGIELINHATSSAP--SEKVPVSSLTTEGHIISTISAAADSD 496
L++ + G+ T+ +C+LFGI L ++ + P S + V+ TT H S A +SD
Sbjct: 621 LQEHDIGKSTDG--NCKLFGIPLFSNPVAPEPATSHRNMVNEPTT-AHPQSHQPRALESD 677
Query: 497 GKSDIAKEFK-------EKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDL 549
+S+ + K EK+ + + ++ Q K S RS TKV QG+A+GR++DL
Sbjct: 678 QRSEQPRVSKMADDNEHEKQFQSGHLHTRDIQGKTQT-GSTRSCTKVHKQGIALGRSVDL 736
Query: 550 TTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIF 608
YD LI EL+ +F+ G+L + K W IVYTDDEGDMMLVGDDPW EF MV++IF
Sbjct: 737 AKFNNYDELIAELDRLFEFGGELISPKKNWLIVYTDDEGDMMLVGDDPWQEFVGMVRKIF 796
Query: 609 ICSSQDVKKMSPGSKLPMFSIEGEDILLSSDSAE 642
I + ++V+KM+PG+ + +G++ LL D +
Sbjct: 797 IYTREEVQKMNPGT----LNSKGDEHLLDVDGVD 826
>gi|222619803|gb|EEE55935.1| hypothetical protein OsJ_04626 [Oryza sativa Japonica Group]
Length = 856
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/333 (59%), Positives = 248/333 (74%), Gaps = 14/333 (4%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE--- 57
+EQ+EAS NQ + ++ L+ LPSK+LCRV+N+ L AEQ+TDEVYAQ+ L+PEP QNE
Sbjct: 46 IEQVEASMNQVADSQMRLYDLPSKLLCRVLNVELKAEQDTDEVYAQVMLMPEPEQNEMAV 105
Query: 58 -PTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHA--TECLPPLDMNQSTPTQ 114
TTP P + RP S + T S+ + LP DM QS PTQ
Sbjct: 106 EKTTPTSGPVQA-RPPGEGPSARRSPRLTPARTAASLYSAATLMSASLPWYDMTQSPPTQ 164
Query: 115 ELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGV 174
ELVAKDLH +WRF+HIFRGQPRRHLL +GWS FV+SKRLVAGD F+FLRGENGEL VGV
Sbjct: 165 ELVAKDLHSMDWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGV 224
Query: 175 RCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLE 232
R RQ S++PSSVISSQSMHLGVLATA HA+ T++MF VYYKPRT S+FII ++Y+E
Sbjct: 225 RRAMRQLSNVPSSVISSQSMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYME 284
Query: 233 AVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITR 292
+V N ++VGMR++MRFEGE++PE+RF+GT++G E+ P W +S WRSLKV+WDEP++I R
Sbjct: 285 SVKNNYSVGMRFRMRFEGEEAPEQRFTGTIIGSENLDPVWPESSWRSLKVRWDEPSTIPR 344
Query: 293 PDRVSPWEIEPFVASATPNLVQPV-LAKNKRPR 324
PDRVSPW+IEP AS+ P V P+ L++ KRPR
Sbjct: 345 PDRVSPWKIEP--ASSPP--VNPLPLSRVKRPR 373
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/120 (51%), Positives = 87/120 (72%), Gaps = 2/120 (1%)
Query: 507 EKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF 566
EK +Q Q S K+ QSK + + S RS TKV QGVA+GR++DL+ YD L EL++MF
Sbjct: 666 EKSGQQAQQSSKDVQSK-TQVASTRSCTKVHKQGVALGRSVDLSKFSNYDELKAELDKMF 724
Query: 567 DIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLP 625
+ G+L + K W+IVYTD+EGDMMLVGDDPW EFC++V++I+I + ++V+KM+ S P
Sbjct: 725 EFDGELVSSNKNWQIVYTDNEGDMMLVGDDPWEEFCSIVRKIYIYTKEEVQKMNSKSNAP 784
>gi|357453821|ref|XP_003597191.1| Auxin response factor [Medicago truncatula]
gi|355486239|gb|AES67442.1| Auxin response factor [Medicago truncatula]
Length = 822
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 258/693 (37%), Positives = 372/693 (53%), Gaps = 91/693 (13%)
Query: 16 IPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQN----EPTTPDPCPAD---- 67
IP + L +ILCRVVN+ L+A +E DEVY Q+ LLP+ + P+ AD
Sbjct: 97 IPTYGLQPQILCRVVNVQLLANKENDEVYTQVALLPQAELAGMCLDDKEPEGLEADDEGN 156
Query: 68 --SP-RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGY 124
SP + H F K LTASDTSTHGGFSV R+ A +C PPLD Q P+QELVAKDLHG
Sbjct: 157 GRSPTKLASHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGV 216
Query: 125 EWRFKHIFRG------------QPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHV 172
W+F+HI+RG QPRRHLLTTGWS FV+ K LV+GD +FLRGENGEL +
Sbjct: 217 GWKFRHIYRGRDETELLCWLDCQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGENGELRL 276
Query: 173 GVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQ--FIISLNKY 230
G+R AR ++ +P S+I +QS L++ ++A++ ++MF V+Y PR S F++ KY
Sbjct: 277 GIRRAARPRNGLPESIIGNQSCSPSFLSSVANAISAKSMFHVFYSPRASHADFVVPYQKY 336
Query: 231 LEAVNNKFAVGMRYKMRFEGEDSPERRF-SGTVVGVEDFSPH-WKDSKWRSLKVQWDEPA 288
+++ N +G R+KM+FE ++SPERR SG V G+ D P+ W SKWR L V+WDE
Sbjct: 337 AKSIRNPVTIGTRFKMKFEMDESPERRCSSGIVTGMSDLDPYKWPKSKWRCLMVRWDEDI 396
Query: 289 SITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPW------ 342
DRVSPWEI+P + N+ K R L +E P + + S
Sbjct: 397 GANHQDRVSPWEIDPSTSLPPLNIQSSRRLKKLRTGLHVESPSHFITAGDSGFMDFDESI 456
Query: 343 -SARLAQSHNLTQL--------SVTAEDKRIDNHVAWHHKHSDFSSN------SNFMSRT 387
S+++ Q T +VT + + N + +H++ +SN S+ +R
Sbjct: 457 RSSKVLQGQEKTSFMSLYYGCDTVTKQKEFDINSL----RHTNLASNGARKITSSEFTRI 512
Query: 388 QSDG-----EWLTSPRVKFSQQLFQEAIDDNK---NISAWP----AHSGHSTPHPSKPNN 435
Q E PRV +Q+++ K N+++W +++ ++ + +K N
Sbjct: 513 QPSSYADFTEMNRFPRVLQAQEIYPLRSLTGKVDLNLNSWGKTNVSYTKYNLHNATKLNF 572
Query: 436 DTLLEQVETG--------RKTETGTSCRL-----FGIELINHATSS----APSEKVPVSS 478
+L +V K G+S F + ++ T S A +V +SS
Sbjct: 573 HSLGSEVLQNSSFPYGDIHKVGQGSSMLCSKPTNFQLGNVSFNTPSSQIGALRNEVGLSS 632
Query: 479 --LTTEGHIISTISAAADSDGKSDIAKE--FKEK----KQEQVQVSPKESQSKQSCLTS- 529
+ E + + ISAA D I+ + FKE K +S + Q+ S
Sbjct: 633 FKIRNEQKLQNDISAATSLDANIRISNDENFKEMVNPCKLFGFSLSAAAETTSQNLQNSA 692
Query: 530 NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGD 588
RS TKV QG VGRA+DL+ L Y+ L+ ELE +F ++G L K W I+YTD E D
Sbjct: 693 KRSCTKVHKQGSLVGRAIDLSRLSSYNDLVSELERLFGMEGLLRDPDKGWRILYTDSEND 752
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPG 621
+M+VGDDPWHEFC+MV +I I + ++V+KM+ G
Sbjct: 753 IMVVGDDPWHEFCDMVSKIHIYTQEEVEKMTIG 785
>gi|8778352|gb|AAF79360.1|AC007887_19 F15O4.42 [Arabidopsis thaliana]
Length = 570
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 186/330 (56%), Positives = 238/330 (72%), Gaps = 17/330 (5%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPE------PS 54
+E +EAST +ELN+ P+ LPSK+ CRV+ IHL E +DE YA+ITL+P+ P+
Sbjct: 54 IELVEASTREELNELQPICDLPSKLQCRVIAIHLKVENNSDETYAKITLMPDTTQVVIPT 113
Query: 55 QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQ 114
QNE + RP V+SF+KVLTASD S +G FSV +KHA ECLPPLDM+Q P Q
Sbjct: 114 QNE---------NQFRPLVNSFTKVLTASDISANGVFSVPKKHAIECLPPLDMSQPLPAQ 164
Query: 115 ELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGV 174
EL+A DLHG +W F+H +RG P+RHLLTTGW+ F TSK+LV GD VF+RGE GEL VG+
Sbjct: 165 ELLAIDLHGNQWSFRHSYRGTPQRHLLTTGWNEFTTSKKLVKGDVIVFVRGETGELRVGI 224
Query: 175 RCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAV 234
R QQ ++PSS++S M GV+A+A HA Q MF+V YKPR+SQFI+S +K+L+AV
Sbjct: 225 RRARHQQGNIPSSIVSIDCMRHGVIASAKHAFDNQCMFIVVYKPRSSQFIVSYDKFLDAV 284
Query: 235 NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPD 294
NNKF VG R+ MRFEG+D ERR+ GT++GV +FSPHWK S WRSL+VQWDE AS RP+
Sbjct: 285 NNKFNVGSRFTMRFEGDDLSERRYFGTIIGVSNFSPHWKCSDWRSLEVQWDEFASFLRPN 344
Query: 295 RVSPWEIEPFVASATPNLVQPVLAKNKRPR 324
+VSPWEIE + + N+ + KNKR R
Sbjct: 345 KVSPWEIEHLMPAL--NVPRSSFLKNKRLR 372
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/221 (35%), Positives = 115/221 (52%), Gaps = 57/221 (25%)
Query: 406 FQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHA 465
F++A++ ++ + ++P P P + N+ ++ Q+E T+ GT+ RLFG+ L
Sbjct: 377 FEDAMNPSRLLMSYPVQ-----PMPKRNYNNQMVTQIEENITTKAGTNFRLFGVSL---- 427
Query: 466 TSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAK--EFKEKKQEQVQVSPKESQSK 523
++ P K P+ + SDI+K E K+ Q Q SP + QSK
Sbjct: 428 -ATPPVIKDPIEQI------------------GSDISKLTEGKKFGQSQTLRSPTKIQSK 468
Query: 524 Q-----SC---------------------LTS-NRSRTKVQMQGVAVGRALDLTTLVGYD 556
Q +C LTS N +VQMQGV +GRA+DL+ L GYD
Sbjct: 469 QFSSTRTCTKVSIRSIYSYSLYMKLFLIILTSHNFDMEQVQMQGVTIGRAVDLSVLNGYD 528
Query: 557 HLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPW 597
LI ELE++FD+KGQL TR +W+I++T + D MLVGDDPW
Sbjct: 529 QLILELEKLFDLKGQLQTRNQWKIIFTGSDEDEMLVGDDPW 569
>gi|224057828|ref|XP_002299344.1| predicted protein [Populus trichocarpa]
gi|222846602|gb|EEE84149.1| predicted protein [Populus trichocarpa]
Length = 376
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 202/332 (60%), Positives = 254/332 (76%), Gaps = 8/332 (2%)
Query: 1 MEQLEASTNQELN-QRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQN-EP 58
+EQ+EASTNQ + Q++P + LP KILCRVVN+ L AE +TDEV+AQ+ LLP Q+ +
Sbjct: 34 IEQVEASTNQVADDQQMPAYNLPPKILCRVVNVQLKAELDTDEVFAQVILLPVAEQDVDL 93
Query: 59 TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
+ P RP+VHSF K+LTASDTSTHGGFSVLR+HA ECLPPLDM+ P QELVA
Sbjct: 94 VEKEDLPPPPARPRVHSFCKMLTASDTSTHGGFSVLRRHADECLPPLDMSLQPPAQELVA 153
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
KDLHG EWRF+HIFRGQPRRHLL +GWS FV++K+LVAGD F+FLRGE EL VGVR
Sbjct: 154 KDLHGNEWRFRHIFRGQPRRHLLQSGWSLFVSAKKLVAGDAFIFLRGETEELRVGVRRAL 213
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNN 236
Q S++PSSV+SS SMH+G+LAT HAV+T +MF VYYKPRTS +FII ++KY E+V
Sbjct: 214 SQPSNVPSSVMSSHSMHIGILATVWHAVSTGSMFTVYYKPRTSPAEFIIPIDKYRESVKI 273
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+A+GMR+KM+FE E++PE+RFSGTV+GVE+ P W SKWR LKV+WDE + + RPDR
Sbjct: 274 NYAIGMRFKMKFEAEEAPEQRFSGTVIGVEEADPKKWPRSKWRCLKVRWDETSPVHRPDR 333
Query: 296 VSPWEIEPFVASATPNLVQPVLAKNKRPRLSM 327
VSPW+IE +A P+L ++KR R +M
Sbjct: 334 VSPWKIERALA---PSLDPVPGCQSKRHRSNM 362
>gi|291196883|emb|CAX63135.1| ARF-L2 protein [Ginkgo biloba]
Length = 912
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 193/334 (57%), Positives = 248/334 (74%), Gaps = 6/334 (1%)
Query: 4 LEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDP 63
+ AS Q ++Q+ P + LP +ILCRV+N++L A+QE DEVYAQ+TL+PE ++E +
Sbjct: 96 VAASIKQGVDQQTPPYNLPPQILCRVLNVNLHADQEMDEVYAQLTLVPESEKSEKCMEEQ 155
Query: 64 CPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHG 123
PA S H F K LTASDTSTHGGFSV R+ A +C PPLD Q P+QELVAKDLHG
Sbjct: 156 VPA-STSCTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYTQQRPSQELVAKDLHG 214
Query: 124 YEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSS 183
EWRF+HIFRGQPRRHLLTTGWS FV++KRLV+GD +FLRGENGEL +G+R +RQQS
Sbjct: 215 REWRFRHIFRGQPRRHLLTTGWSVFVSNKRLVSGDAVLFLRGENGELRLGIRRASRQQSY 274
Query: 184 MPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVG 241
SSV+SSQSMHLGVL A+HAVAT++MF +++ PRTS +F+I +KY+++ N+ A+G
Sbjct: 275 ASSSVLSSQSMHLGVLTAAAHAVATKSMFHIFFNPRTSPAEFVIPYHKYVKSFNHPLAIG 334
Query: 242 MRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWE 300
MR+KMRFE ED+ ERR++GT+ G+ D P W SKWRSLKV+WDE A+ R +RVSPWE
Sbjct: 335 MRFKMRFETEDAAERRYTGTITGIGDVEPARWPGSKWRSLKVEWDEHAANERQERVSPWE 394
Query: 301 IEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDL 334
IEPF++S N+ P + KR R S + DL
Sbjct: 395 IEPFISSTGLNI--PAGPRIKRLRTSFQPTSTDL 426
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 112/197 (56%), Gaps = 19/197 (9%)
Query: 441 QVETGRKTETGTSCRLFGIELINHATS-SAPSEKVPVSSLTTEGHIIST------ISAAA 493
QV+ G + +C+LFG+ LI + S ++ S+ ++G ++ S++
Sbjct: 682 QVKDGGGVKGDRNCKLFGVSLIEESDCIDDGSSRMHKDSVISDGLHVALGKGPFHFSSSQ 741
Query: 494 DSDGKSDIAKEFKE--------KKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGR 545
D D + K+ + + EQ S ++K S S RS TKV QG AVGR
Sbjct: 742 DHD---QLEKDLDDHCGHLVPLRDTEQEITSQMVPKAKSSVQASGRSCTKVHKQGNAVGR 798
Query: 546 ALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMV 604
A+DL+ GYD LI ELE +F+++ L K W +VYTD+EGD+MLVGDDPW EFC++V
Sbjct: 799 AVDLSKFHGYDELIRELERLFNMENLLSDPEKGWHVVYTDNEGDIMLVGDDPWQEFCSIV 858
Query: 605 KRIFICSSQDVKKMSPG 621
+I I + ++V+KM+PG
Sbjct: 859 CKIMIYTREEVEKMTPG 875
>gi|379323242|gb|AFD01320.1| auxin response factor 25 [Brassica rapa subsp. pekinensis]
Length = 549
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 174/321 (54%), Positives = 241/321 (75%), Gaps = 5/321 (1%)
Query: 2 EQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTP 61
E+L AS + EL Q P+F +PSKI C V +I+L E T+E+YA+++LLP+ S E P
Sbjct: 43 EKLVASMDDELCQLKPIFDIPSKICCNVFSINLKVEPSTNEIYAEVSLLPDTSDVEIPIP 102
Query: 62 DPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDL 121
++ ++ F+KVL+ASDTST+GGF + ++HA ECLP LDM+Q TP+QE++AKD+
Sbjct: 103 K---NENNIQNINYFTKVLSASDTSTNGGFVLYKRHAIECLPLLDMSQLTPSQEIIAKDI 159
Query: 122 HGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQ 181
HG+EW FKH RG P+RHL T+GW+ F K+LVAGD+FVFLRGENGE VG+ A QQ
Sbjct: 160 HGHEWSFKHTSRGTPKRHLFTSGWNEFAKGKKLVAGDSFVFLRGENGESRVGISKAAHQQ 219
Query: 182 SSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVG 241
++P+S+IS +SMH V+ATA +A+ + MFVV+YKPR+SQFI++ +K+++ VNNKF++G
Sbjct: 220 RNIPTSLISKESMHHSVVATALNAIENKCMFVVFYKPRSSQFIVNFDKFVDRVNNKFSIG 279
Query: 242 MRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEI 301
++ M+FEG+D E R++GTVVGV DFS HWKDS+WRSL+VQWDE A+I RPD+VSPWEI
Sbjct: 280 SKFSMKFEGKDLNEIRYNGTVVGVRDFSTHWKDSEWRSLEVQWDEAATIPRPDKVSPWEI 339
Query: 302 EPFVASATPNLVQPVLAKNKR 322
E S+ N+ + K+KR
Sbjct: 340 ELLTHSS--NIFKSDALKHKR 358
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 105/182 (57%), Gaps = 35/182 (19%)
Query: 435 NDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAAD 494
N+ +++ ++ T TSCRLFG++L+ A + P E +
Sbjct: 376 NEQMVQAMKEPSTTTATTSCRLFGVDLMVPAITKDPVEPIV------------------- 416
Query: 495 SDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVG 554
S+ K I+K F+++K + VQ +SRTKV M+GV + R +DLT G
Sbjct: 417 SNKKCKISKIFEDEKVDHVQA---------------KSRTKVHMEGV-IERTVDLTIFDG 460
Query: 555 YDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 614
Y+ LIDELE +FDIKG+LH KW++ + ++GDMM++GDDPW +FCNM K IFICS +D
Sbjct: 461 YNQLIDELERLFDIKGELHMHNKWKMFFIYNDGDMMILGDDPWPKFCNMAKEIFICSKED 520
Query: 615 VK 616
VK
Sbjct: 521 VK 522
>gi|291196881|emb|CAX63133.1| ARF-L1 protein [Ginkgo biloba]
Length = 958
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 189/346 (54%), Positives = 245/346 (70%), Gaps = 17/346 (4%)
Query: 1 MEQLEAS-TNQELNQR-IPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEP 58
MEQ+ S +Q L QR + + LP +I CRV+N++L A+QETDEVYAQ+TL+PEP EP
Sbjct: 62 MEQVTTSLKHQCLEQRQMRPYDLPPQIFCRVLNVNLHADQETDEVYAQVTLVPEP---EP 118
Query: 59 TTPDPCPADSP-------RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQST 111
D + + H F K LTASDTSTHGGFSV R+ A +C PPLD NQ
Sbjct: 119 AEKDLEEEEEDEEAGVLNKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYNQQR 178
Query: 112 PTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELH 171
P+QELVAKDLHG EWRF+HI+RGQPRRHLLTTGWS FV K L++GD +FLRGENGEL
Sbjct: 179 PSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTGWSVFVNHKGLMSGDAVLFLRGENGELR 238
Query: 172 VGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNK 229
+G+R ARQQS +PSSV+SSQSMHLGVLA+A++AVAT++MF ++Y PR S +F+I +K
Sbjct: 239 LGIRRAARQQSVIPSSVLSSQSMHLGVLASAANAVATKSMFHIFYNPRASPAEFLIPYHK 298
Query: 230 YLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPA 288
Y+++ N ++GMR+KMRFE ED+ ERR++G + G+ D P W SKWRSL V WDE A
Sbjct: 299 YVKSCNLPLSIGMRFKMRFETEDTAERRYTGIITGIGDVDPAKWPGSKWRSLMVGWDEHA 358
Query: 289 SITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDL 334
+ + +RVSPWEIEP ++ A N+ + KR + S+ P+D
Sbjct: 359 ANEQQERVSPWEIEPCISVAGLNVSSGT--RIKRLKTSLPSTPVDF 402
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 105/191 (54%), Gaps = 15/191 (7%)
Query: 453 SCRLFGIELINHATS--SAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 510
SC+LFG LI + A S ++P + +T ++ S ++ + K+
Sbjct: 742 SCKLFGFSLIEESACIDDAISSRIPRAGVTMNFLHMAHDQEPVQSSILRNLDQPLKDLHD 801
Query: 511 EQVQVSPKESQSKQSCLTS--------NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDEL 562
+ E Q ++ R TKV QG VGRA+DL+ L GYD LI EL
Sbjct: 802 HSEGLESSEHQITFQTISKVPTSVPALGRKCTKVHKQGNIVGRAVDLSKLDGYDELISEL 861
Query: 563 EEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPG 621
E +F+++G L+ K W++VYTD+E D+MLVGDDPW EFCN+V +I I + ++V+KM+PG
Sbjct: 862 ERLFNMEGLLNDPEKGWQVVYTDNENDIMLVGDDPWQEFCNIVCKILIYTHEEVEKMAPG 921
Query: 622 SKLPMFSIEGE 632
MFS + +
Sbjct: 922 ----MFSDDAQ 928
>gi|379323246|gb|AFD01322.1| auxin response factor 27 [Brassica rapa subsp. pekinensis]
Length = 541
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 174/332 (52%), Positives = 234/332 (70%), Gaps = 6/332 (1%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
+EQL AS N L Q P+F + S+I C V++I L E TDEVYA+++LLP + E T
Sbjct: 53 IEQLVASANDNLCQLKPIFDISSRIHCNVISIKLKVETNTDEVYAKVSLLPCSPEVEITF 112
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
P+ D+ + F+KVLTASD HG F + +K A ECLPPLDM+Q P+QE+VAKD
Sbjct: 113 PN----DNNEQNIKYFTKVLTASDIGPHGDFILFKKDAIECLPPLDMSQLIPSQEIVAKD 168
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
LH + W+FKH FRG P+RHL T+GW FV K L GD+FVFLRGENGE VG+R + Q
Sbjct: 169 LHDHVWKFKHTFRGTPKRHLFTSGWKEFVKGKSLAVGDSFVFLRGENGESRVGIRKTSHQ 228
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAV 240
QS M SSVIS +SMH G +A+AS+A+ T+ MF V+YKP++S+FI++ +K+L+AVN KF
Sbjct: 229 QSDMSSSVISKESMHHGFIASASNAIHTKCMFDVFYKPKSSKFIVNCDKFLDAVNMKFNT 288
Query: 241 GMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWE 300
R+ M+FEG D E +SGT+V +EDFS +WK S+WR+L+VQWDE A+I RP++VS WE
Sbjct: 289 SSRFTMKFEGHDFNEIIYSGTIVKMEDFSIYWKGSEWRNLQVQWDEAATIPRPNKVSLWE 348
Query: 301 IEPFVASATPNLVQPVLAKNKRPRLSMEVPPL 332
IEP + S+ N+++ V+ NKR R E P+
Sbjct: 349 IEPLIPSS--NILKSVIQNNKRQREINEFGPI 378
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 106/185 (57%), Gaps = 22/185 (11%)
Query: 428 PHPSKPN-NDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHII 486
P SKP+ ND +++ + T +S RLFG++L A+S A P+ S
Sbjct: 377 PIISKPDYNDQMVQSTKENSTTNASSSFRLFGVDLT--ASSKARDVLEPLESYQ------ 428
Query: 487 STISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRA 546
K+ ++ F+E+ +Q Q ++ ++ L+ S TKV M+GV R
Sbjct: 429 -----------KNKTSEIFEEENLDQTQAVTSLTEIQRKELSFTTSSTKVHMEGVT--RT 475
Query: 547 LDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKR 606
+DLT GY+H+I ELE++F+I+G+LH ++W++ + D EGDMMLVGDDPW +FCN+VK
Sbjct: 476 VDLTVFDGYNHMIVELEKLFNIEGKLHMHSQWKLTFKDHEGDMMLVGDDPWPKFCNIVKE 535
Query: 607 IFICS 611
I I S
Sbjct: 536 IVISS 540
>gi|302756411|ref|XP_002961629.1| hypothetical protein SELMODRAFT_437944 [Selaginella moellendorffii]
gi|300170288|gb|EFJ36889.1| hypothetical protein SELMODRAFT_437944 [Selaginella moellendorffii]
Length = 795
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 204/403 (50%), Positives = 269/403 (66%), Gaps = 24/403 (5%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPT- 59
+EQ+ ASTNQ + ++P + LPS+I CR++N+ L A++ETDEV+AQ+TL+PE Q + +
Sbjct: 63 IEQVAASTNQSADMQMPHYNLPSQIYCRLLNLTLGADRETDEVFAQMTLVPENEQGDQSI 122
Query: 60 -TPD---PCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQE 115
T D PCP + K+ F K LT+SDTSTHGGFSV R+ A ECLPPLD QS P QE
Sbjct: 123 DTEDELSPCP----KRKLSMFCKNLTSSDTSTHGGFSVPRRAAEECLPPLDYQQSPPAQE 178
Query: 116 LVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR 175
LVAKDLHG EW+F+HI+RGQPRRHLLTTGWS FV+ K+LVAGD +FLRG+NGEL +GVR
Sbjct: 179 LVAKDLHGVEWKFRHIYRGQPRRHLLTTGWSVFVSQKKLVAGDAVLFLRGDNGELRIGVR 238
Query: 176 CLARQQSSM-PSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLE 232
RQQ+S+ SS++SS SMHLGVLA A+HAV+T+TMF ++Y PR S +F++ +KY++
Sbjct: 239 RAVRQQNSVTSSSLLSSHSMHLGVLAAAAHAVSTKTMFTIFYNPRASPAEFVVPYHKYVK 298
Query: 233 AVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASIT 291
A + +VGMR+KMRFE E+S ERR+ GT+ GV D S W +SKWR L+V WDE +
Sbjct: 299 AFTHNLSVGMRFKMRFETEESSERRYMGTITGVGDIDSDRWINSKWRCLQVGWDEQTANE 358
Query: 292 RPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSAR------ 345
R +RVSPWEIEPF+A PN+ P + + + P + P+ + SA+
Sbjct: 359 RQERVSPWEIEPFIA---PNVANPPTTQRVK-KFRPNTPANEFPTGKNNSDSAQAMHMRA 414
Query: 346 LAQSHNLTQLSVTAEDKRIDNHVA-WHHKHSDFSSNSNFMSRT 387
L SH L S E R + A W + D S RT
Sbjct: 415 LQGSHALGMPSKEEEGLRGSSPFAVWPYNRDDLKGESWIQLRT 457
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 93/174 (53%), Gaps = 19/174 (10%)
Query: 453 SCRLFGIELINH---ATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKK 509
SC++FG LI A S P E S E + A S G + +
Sbjct: 597 SCKIFGFSLIEKSPPAASRNPEEARLNPSRGGE-QMTRCSGRAGPSAGNGSL-------E 648
Query: 510 QEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK 569
E+ P + S ++C TKV +QG AVGRA+DL+ Y L+ EL+++F +
Sbjct: 649 HERCASRPASAWSLRTC-------TKVHLQGAAVGRAVDLSKFSCYSELLLELQQLFGLD 701
Query: 570 GQLHT-RTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 622
L + W++VYTD+EGDM+LVGDDPW EFCNMV+ I I S +V+K++ G+
Sbjct: 702 NALDDPDSGWQVVYTDNEGDMLLVGDDPWQEFCNMVRNIRILSPAEVEKLTQGA 755
>gi|301793231|emb|CBA12006.1| putative auxin response factor 2/1/9, partial [Cycas rumphii]
Length = 775
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 181/259 (69%), Positives = 208/259 (80%), Gaps = 5/259 (1%)
Query: 69 PRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRF 128
PR SF K LTASDTSTHGGFSVLR+HA ECLPPLDMNQ P QELVAKDLHG W F
Sbjct: 11 PRSGACSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMNQQPPAQELVAKDLHGVGWHF 70
Query: 129 KHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSV 188
+HIFRGQPRRHLLTTGWS FV+SKRL+AGD F+FLRG+NGEL VGVR RQQ+++ SSV
Sbjct: 71 RHIFRGQPRRHLLTTGWSVFVSSKRLIAGDAFIFLRGKNGELRVGVRRAMRQQNNVSSSV 130
Query: 189 ISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKM 246
ISS SMHLGV+ATASHAV+T TMF VYYKPRT S FII KY+EA+NN F+VGMR+KM
Sbjct: 131 ISSHSMHLGVVATASHAVSTHTMFTVYYKPRTSPSGFIIPYEKYMEAMNNNFSVGMRFKM 190
Query: 247 RFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 305
RFEGE++PE+RF GT++G D P W SKWRSLKVQWDE + + RP+RVSPWEIE +
Sbjct: 191 RFEGEEAPEQRFIGTIIGTGDSDPVRWPGSKWRSLKVQWDEISVVARPERVSPWEIE-LI 249
Query: 306 ASATPNLVQPVLAKNKRPR 324
A+A PV ++NKRPR
Sbjct: 250 ATAAALSPLPV-SRNKRPR 267
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/215 (36%), Positives = 118/215 (54%), Gaps = 23/215 (10%)
Query: 442 VETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIIST------ISAAADS 495
E G + +C+LFG +L++++ S + V + S+T E + +S A+
Sbjct: 537 TEMGPTAPSANNCKLFGFQLVDNSVVSESTTPVIIGSVTGEDMQAAVHAPRENLSQPAEL 596
Query: 496 DGKSDIAKEFKE-------KKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALD 548
D +S+ +K K ++++ Q S KE+Q + S RS TKVQ QG A GRA+D
Sbjct: 597 DQQSEPSKTSKSDPPTSSCEREKWSQRSSKETQFRAES-NSFRSHTKVQKQGSAFGRAVD 655
Query: 549 LTTLVGYDHLIDELEEMFDIKGQLHT-RTKWEIVYTDDEGDMMLVGDDPWH--------E 599
L GY I ELE+MF+I+G+L R W +VYTD+EGDMMLVGD PW E
Sbjct: 656 LMKFEGYPEFIHELEQMFNIEGELEDPRKGWLVVYTDNEGDMMLVGDHPWQEFLHPINRE 715
Query: 600 FCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGEDI 634
FC + +I+I + ++V+KM+P L IEG +
Sbjct: 716 FCRIAHKIYIYTREEVEKMTPWQTLDGKKIEGRSV 750
>gi|302762557|ref|XP_002964700.1| hypothetical protein SELMODRAFT_438973 [Selaginella moellendorffii]
gi|300166933|gb|EFJ33538.1| hypothetical protein SELMODRAFT_438973 [Selaginella moellendorffii]
Length = 396
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 188/331 (56%), Positives = 245/331 (74%), Gaps = 16/331 (4%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPT- 59
+EQ+ ASTNQ + ++P + LPS+I CR++N+ L A++ETDEV+AQ+TL+PE Q + +
Sbjct: 63 IEQVAASTNQSADMQMPHYNLPSQIYCRLLNLTLGADRETDEVFAQMTLVPENEQGDQSI 122
Query: 60 -TPD---PCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQE 115
T D PCP + K+ F K LT+SDTSTHGGFSV R+ A ECLPPLD QS P QE
Sbjct: 123 DTEDELSPCP----KRKLSMFCKNLTSSDTSTHGGFSVPRRAAEECLPPLDYQQSPPAQE 178
Query: 116 LVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR 175
LVAKDLHG EW+F+HI+RGQPRRHLLTTGWS FV+ K+LVAGD +FLRG+NGEL +GVR
Sbjct: 179 LVAKDLHGVEWKFRHIYRGQPRRHLLTTGWSVFVSQKKLVAGDAVLFLRGDNGELRIGVR 238
Query: 176 CLARQQSSM-PSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLE 232
RQQ+S+ SS++SS SMHLGVLA A+HAV+T+TMF ++Y PR S +F++ +KY++
Sbjct: 239 RAVRQQNSVTSSSLLSSHSMHLGVLAAAAHAVSTKTMFTIFYNPRASPAEFVVPYHKYVK 298
Query: 233 AVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASIT 291
A + +VGMR+KMRFE E+S ERR+ GT+ GV D S W +SKWR L+V WDE +
Sbjct: 299 AFTHNLSVGMRFKMRFETEESSERRYMGTITGVGDIDSDRWINSKWRCLQVGWDEQTANE 358
Query: 292 RPDRVSPWEIEPFVASATPNLVQPVLAKNKR 322
R +RVSPWEIEPF+A PN+ P + R
Sbjct: 359 RQERVSPWEIEPFIA---PNVANPPTTQRAR 386
>gi|302761368|ref|XP_002964106.1| hypothetical protein SELMODRAFT_166729 [Selaginella moellendorffii]
gi|300167835|gb|EFJ34439.1| hypothetical protein SELMODRAFT_166729 [Selaginella moellendorffii]
Length = 774
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 184/336 (54%), Positives = 240/336 (71%), Gaps = 10/336 (2%)
Query: 1 MEQLEASTNQEL-NQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPT 59
+EQ+ ASTNQ + +IP + LPS+I CRV+N+ L A +ETDEVYAQ+TL+PE Q + +
Sbjct: 102 IEQVLASTNQNAADLQIPQYNLPSQIFCRVLNLSLGAYRETDEVYAQMTLVPENEQLDQS 161
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
P S + K+ FSK LT+SDTSTHGGFSV R+ A EC P LD Q+ P QE++AK
Sbjct: 162 LELDEPTASSKAKLSMFSKNLTSSDTSTHGGFSVPRRAAEECFPRLDYQQTPPAQEIIAK 221
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLHG EW+F+HI+RGQPRRHLLTTGWS FV+ K+LVAGDT +F+RG+NGEL +G+R R
Sbjct: 222 DLHGVEWKFRHIYRGQPRRHLLTTGWSVFVSQKKLVAGDTVLFVRGDNGELRIGIRRAVR 281
Query: 180 -QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNN 236
Q S SS++SS SM +GVLA A+HAV+T+TMF V+Y PR S +F++ +KY+++
Sbjct: 282 TQSSVTSSSLLSSHSMQIGVLAAAAHAVSTKTMFTVFYNPRASPAEFVVPYHKYVKSFKM 341
Query: 237 KFAVGMRYKMRFEGEDSPER--RFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRP 293
+GMR+KMRFE EDS ER R+ GT+ G+ D P W SKWR LKV WDE A+ R
Sbjct: 342 NILIGMRFKMRFETEDSSERSVRYMGTITGIGDIDPARWPGSKWRFLKVGWDEHAASERQ 401
Query: 294 DRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEV 329
+RVSPWEIEPF+A PN+ PV K RP + ++
Sbjct: 402 ERVSPWEIEPFIA---PNVTPPVSTKRFRPTMLTDI 434
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 64/90 (71%), Gaps = 2/90 (2%)
Query: 530 NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDM 589
+R+ TKV G AVGRALDL+ GY L++EL+ +F I L+ ++W+ VY D+EGDM
Sbjct: 657 SRTCTKVHKHG-AVGRALDLSKFRGYTQLLEELQHLFGIDESLNG-SEWQAVYVDNEGDM 714
Query: 590 MLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
+LVGDDPW EFC+ V+ I I S +++K++
Sbjct: 715 LLVGDDPWEEFCSTVRCIRILSPAEIQKLT 744
>gi|79356539|ref|NP_174679.3| auxin response factor 13 [Arabidopsis thaliana]
gi|49616361|gb|AAT67077.1| ARF13 [Arabidopsis thaliana]
gi|332193558|gb|AEE31679.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 505
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 192/464 (41%), Positives = 273/464 (58%), Gaps = 57/464 (12%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
+E +E ST EL+ P+F LPSK+ CRVV I ++ TDEVYAQI+L+P+ ++
Sbjct: 52 IELIENSTRDELDHIRPIFDLPSKLRCRVVAIDRKVDKNTDEVYAQISLMPDTTE---VM 108
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
D+ RP V+ FSK+LTASD S GG + +++A EC PPLDM+Q TQ LVAKD
Sbjct: 109 THNTTMDTRRPIVYFFSKILTASDVSLSGGLIIPKQYAIECFPPLDMSQPISTQNLVAKD 168
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTG--WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
L+G EW FKH+FRG P+RH+ T+G WS F T+KRL+ GD FV LRGENGEL G+R
Sbjct: 169 LYGQEWSFKHVFRGTPQRHMFTSGGGWSVFATTKRLIVGDIFVLLRGENGELRFGIRRAK 228
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKF 238
QQ +PSSVIS+ M GV+A+ +A T+ MF V YKP +SQF+IS +K+++A+NN +
Sbjct: 229 HQQGHIPSSVISANCMQHGVIASVVNAFKTKCMFNVVYKPSSSQFVISYDKFVDAMNNNY 288
Query: 239 AVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSP 298
VG R++M+FEG+D E+R+ GT++GV D SPHWKDS+WRSLKVQWDE + RP++VSP
Sbjct: 289 IVGSRFRMQFEGKDFSEKRYDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVSP 348
Query: 299 WEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVT 358
W+IE + S+ ++ Q L K K
Sbjct: 349 WDIEHLIPSS--DISQSSLKKKKH------------------------------------ 370
Query: 359 AEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISA 418
W + ++ SN + + + SP + + + AI+D+K +S
Sbjct: 371 -----------WLQLNEIGATLSNLWTCQEIGQRSMNSP-ISVPEFSYPNAIEDSKFLSG 418
Query: 419 WPA-HSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIEL 461
HS + P+ + N+D +++ + TE TSC LFG++L
Sbjct: 419 LLLNHSLLAIPNENY-NSDQMIQPRKEDITTEATTSCLLFGVDL 461
>gi|255573830|ref|XP_002527834.1| Auxin response factor, putative [Ricinus communis]
gi|223532758|gb|EEF34537.1| Auxin response factor, putative [Ricinus communis]
Length = 620
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 177/337 (52%), Positives = 238/337 (70%), Gaps = 14/337 (4%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
+EQL A Q+ ++ LPSKILC+V+N+ AE TD+VYAQI LLPEP Q + +
Sbjct: 75 IEQLGAPIQQQSEHQMASLNLPSKILCKVINVQCKAEPITDQVYAQIMLLPEPEQIDVIS 134
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
PDP + R VHSF ++LT SD S+H F V +KHA CLPPLDM+Q P QELVA D
Sbjct: 135 PDPPLPEPERCVVHSFRRILTVSDISSHDHFFVDQKHAEHCLPPLDMSQQLPWQELVATD 194
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
L+G +W F+HIF+G+ +HLLTTGWS FV+SK+LV+GD F+FLRGENGEL VGVR L +
Sbjct: 195 LNGNKWHFQHIFQGKSNKHLLTTGWSAFVSSKKLVSGDMFIFLRGENGELRVGVRRLMGR 254
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKF 238
++++ SS S+Q H +LA AS+A++T ++F V+Y+PRT S+FI+S+NKY+EA N+KF
Sbjct: 255 KTNILSSATSNQIRH-SLLAVASYAISTGSLFCVFYEPRTSRSEFIVSVNKYIEARNHKF 313
Query: 239 AVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSP 298
+GMR+ MRFEGE+ P R +GT+V +E SP W DS+WR KV+WDEP+ I P+RVSP
Sbjct: 314 CIGMRFLMRFEGEEVPIERINGTIVSMET-SPRWPDSEWRCFKVRWDEPSLIVHPERVSP 372
Query: 299 WEIEPFVASATPNLVQPVLAKNKRPRLS----MEVPP 331
WE+E +S+ P + + KR R S ME+ P
Sbjct: 373 WEMENISSSSQP------VPRTKRSRSSSPGAMEISP 403
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 81/149 (54%), Gaps = 8/149 (5%)
Query: 462 INHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQ 521
+ + T SAPS E +S +SD S+ A + +K + ++
Sbjct: 475 VVYVTESAPSVN---KDFGMEEDGCPVLSLENESDQHSETANINQSEKLSVISCDTEKLC 531
Query: 522 SKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRT-KWEI 580
SK+ + +V+MQG+A+GR++DLT ++ LI ELE MF+I+G+L T KW I
Sbjct: 532 SKKQITSC----AEVRMQGIALGRSIDLTKFKCHEDLIKELENMFEIEGELSGSTKKWLI 587
Query: 581 VYTDDEGDMMLVGDDPWHEFCNMVKRIFI 609
VYTD + +M LVGD W CNMVK+I I
Sbjct: 588 VYTDADSEMKLVGDYQWEVVCNMVKKILI 616
>gi|31747324|gb|AAP57471.1| auxin response factor-like protein [Mangifera indica]
Length = 326
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 174/261 (66%), Positives = 213/261 (81%), Gaps = 4/261 (1%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE-PT 59
+EQ+EASTNQ +Q++P++ L SKILCRV+N+ L A+ +TDEV+AQITLLPEP+Q+E
Sbjct: 64 IEQVEASTNQFADQQMPIYDLRSKILCRVINVQLKAKPDTDEVFAQITLLPEPNQDENAV 123
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
+P P PR VHSF K LTASDTSTHGGFSVLR+HA ECLP LDM+Q PTQ+LVAK
Sbjct: 124 EKEPPPPLLPRFHVHSFCKTLTASDTSTHGGFSVLRRHAEECLPVLDMSQQPPTQDLVAK 183
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLHG EWRF+HIFRGQPRRHLL +GWS FV+SKRLVAGD F+FLR E EL VGVR R
Sbjct: 184 DLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRCEK-ELRVGVRRAMR 242
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNK 237
QQ ++PSSVISS SMHLGVLATA HAV+T TMF VYYKPR S +FI+ ++Y+E+V +
Sbjct: 243 QQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRISPAEFIVPFDQYMESVKSN 302
Query: 238 FAVGMRYKMRFEGEDSPERRF 258
+++GMR+KMRFEGE++PE+R
Sbjct: 303 YSIGMRFKMRFEGEEAPEQRL 323
>gi|296086637|emb|CBI32272.3| unnamed protein product [Vitis vinifera]
Length = 696
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 171/308 (55%), Positives = 224/308 (72%), Gaps = 5/308 (1%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
+EQ+EA TNQ+ +P++ LPSKI C+VV + L AE TDEV+AQ+TLLPE Q E +
Sbjct: 61 IEQVEAYTNQDGQMEMPIYNLPSKIFCKVVYVQLKAEACTDEVFAQVTLLPEAKQ-EWQS 119
Query: 61 PDPCPAD--SPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
PD + R +SFSK LT SDT+THGGFSV ++HA ECLPPLDM Q P QEL+A
Sbjct: 120 PDHGNSQFFPRRTHSYSFSKTLTPSDTNTHGGFSVPKRHADECLPPLDMTQQPPVQELIA 179
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
KDLHG EWRF+HIFRGQP+RHLLT+GWS FVTSK+LVAGD +FLRG NGEL VGVR
Sbjct: 180 KDLHGTEWRFRHIFRGQPKRHLLTSGWSQFVTSKKLVAGDACIFLRGANGELRVGVRRAT 239
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS-QFIISLNKYLEAVNNK 237
R Q+++ +SV+S SM G+LA+A HA++T TMF VY++P TS +FII ++Y+++ N
Sbjct: 240 RLQNNVSASVLSGHSMQHGILASAFHAISTGTMFTVYFRPWTSPEFIIPYDQYIKSAENN 299
Query: 238 FAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRV 296
++VG R++M FEGE+ ++R +GT+VG+ED W +S+WR KVQWD P+RV
Sbjct: 300 YSVGTRFRMLFEGEECSQQRCAGTIVGIEDVDAIRWPNSEWRRFKVQWDTSDITPCPERV 359
Query: 297 SPWEIEPF 304
+ W IEP
Sbjct: 360 AAWNIEPI 367
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 94/167 (56%), Gaps = 10/167 (5%)
Query: 455 RLFGIELINHATSSAPSEKVPVSS-LTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQV 513
+LFG+ LIN + + PS +V SS L + I T ++ ++ + + V
Sbjct: 533 KLFGVNLIN-SPAELPSPQVASSSELQSPCSIPPTSQSSISESIQA-------SEPSKSV 584
Query: 514 QVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL- 572
+ Q K C RS TKV G A+GR++DL GYD LI EL++MFD G L
Sbjct: 585 SGDLSDKQCKNCCSVMVRSCTKVLKYGTALGRSIDLARFDGYDELIIELDQMFDFGGSLM 644
Query: 573 HTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
+W + YTDDEGDMML+GD PW EF +MV+RIFIC ++ ++++
Sbjct: 645 DGSCRWHVTYTDDEGDMMLLGDYPWQEFRSMVQRIFICPKEETERLN 691
>gi|359479836|ref|XP_002270286.2| PREDICTED: auxin response factor 23-like [Vitis vinifera]
Length = 801
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 171/308 (55%), Positives = 224/308 (72%), Gaps = 5/308 (1%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
+EQ+EA TNQ+ +P++ LPSKI C+VV + L AE TDEV+AQ+TLLPE Q E +
Sbjct: 166 IEQVEAYTNQDGQMEMPIYNLPSKIFCKVVYVQLKAEACTDEVFAQVTLLPEAKQ-EWQS 224
Query: 61 PDPCPAD--SPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
PD + R +SFSK LT SDT+THGGFSV ++HA ECLPPLDM Q P QEL+A
Sbjct: 225 PDHGNSQFFPRRTHSYSFSKTLTPSDTNTHGGFSVPKRHADECLPPLDMTQQPPVQELIA 284
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
KDLHG EWRF+HIFRGQP+RHLLT+GWS FVTSK+LVAGD +FLRG NGEL VGVR
Sbjct: 285 KDLHGTEWRFRHIFRGQPKRHLLTSGWSQFVTSKKLVAGDACIFLRGANGELRVGVRRAT 344
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS-QFIISLNKYLEAVNNK 237
R Q+++ +SV+S SM G+LA+A HA++T TMF VY++P TS +FII ++Y+++ N
Sbjct: 345 RLQNNVSASVLSGHSMQHGILASAFHAISTGTMFTVYFRPWTSPEFIIPYDQYIKSAENN 404
Query: 238 FAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRV 296
++VG R++M FEGE+ ++R +GT+VG+ED W +S+WR KVQWD P+RV
Sbjct: 405 YSVGTRFRMLFEGEECSQQRCAGTIVGIEDVDAIRWPNSEWRRFKVQWDTSDITPCPERV 464
Query: 297 SPWEIEPF 304
+ W IEP
Sbjct: 465 AAWNIEPI 472
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 94/167 (56%), Gaps = 10/167 (5%)
Query: 455 RLFGIELINHATSSAPSEKVPVSS-LTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQV 513
+LFG+ LIN + + PS +V SS L + I T ++ ++ + + V
Sbjct: 638 KLFGVNLIN-SPAELPSPQVASSSELQSPCSIPPTSQSSISESIQA-------SEPSKSV 689
Query: 514 QVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL- 572
+ Q K C RS TKV G A+GR++DL GYD LI EL++MFD G L
Sbjct: 690 SGDLSDKQCKNCCSVMVRSCTKVLKYGTALGRSIDLARFDGYDELIIELDQMFDFGGSLM 749
Query: 573 HTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
+W + YTDDEGDMML+GD PW EF +MV+RIFIC ++ ++++
Sbjct: 750 DGSCRWHVTYTDDEGDMMLLGDYPWQEFRSMVQRIFICPKEETERLN 796
>gi|302820796|ref|XP_002992064.1| hypothetical protein SELMODRAFT_430287 [Selaginella moellendorffii]
gi|300140186|gb|EFJ06913.1| hypothetical protein SELMODRAFT_430287 [Selaginella moellendorffii]
Length = 781
Score = 351 bits (900), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 183/343 (53%), Positives = 239/343 (69%), Gaps = 17/343 (4%)
Query: 1 MEQLEASTNQEL-NQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPE------- 52
+EQ+ ASTNQ + +IP + LPS+I CRV+N+ L A +ETDEVYAQ+TL+PE
Sbjct: 102 IEQVLASTNQNAADLQIPQYNLPSQIFCRVLNLSLGAYRETDEVYAQMTLVPENELFYIR 161
Query: 53 --PSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQS 110
Q + + P S + K+ F K LT+SDTSTHGGFSV R+ A EC P LD Q+
Sbjct: 162 ISDQQLDQSLELDEPTASSKAKLSMFCKNLTSSDTSTHGGFSVPRRAAEECFPRLDYQQT 221
Query: 111 TPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGEL 170
P QE++AKDLHG EW+F+HI+RGQPRRHLLTTGWS FV+ K+LVAGDT +F+RG+NGEL
Sbjct: 222 PPAQEIIAKDLHGIEWKFRHIYRGQPRRHLLTTGWSVFVSQKKLVAGDTVLFVRGDNGEL 281
Query: 171 HVGVRCLAR-QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISL 227
+G+R R Q S SS++SS SM +GVLA A+HAV+T+TMF V+Y PR S +F++
Sbjct: 282 RIGIRRAVRTQSSVTSSSLLSSHSMQIGVLAAAAHAVSTKTMFTVFYNPRASPAEFVVPY 341
Query: 228 NKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDE 286
+KY+++ +GMR+KMRFE EDS ERR+ GT+ G+ D P W SKWR LKV WDE
Sbjct: 342 HKYVKSFKMNILIGMRFKMRFETEDSSERRYMGTITGIGDIDPARWPGSKWRFLKVGWDE 401
Query: 287 PASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEV 329
A+ R +RVSPWEIEPF+A PN+ PV K RP + ++
Sbjct: 402 HAASERQERVSPWEIEPFIA---PNVTPPVSTKRFRPTMLTDI 441
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 63/90 (70%), Gaps = 2/90 (2%)
Query: 530 NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDM 589
+R+ TKV G AVGRALDL+ GY L++EL+ +F I L+ ++W+ VY D+EGDM
Sbjct: 664 SRTCTKVHKHG-AVGRALDLSKFRGYTQLLEELQHLFGIDESLNG-SEWQTVYVDNEGDM 721
Query: 590 MLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
+LVGDDPW EFC V+ I I S +++K++
Sbjct: 722 LLVGDDPWEEFCTTVRCIRILSPAEIQKLT 751
>gi|301793235|emb|CBA12008.1| putative auxin response factor 3/4 [Pinus pinaster]
Length = 919
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 189/335 (56%), Positives = 248/335 (74%), Gaps = 12/335 (3%)
Query: 6 ASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPC- 64
+S +Q +NQ++ ++LP +ILCRV+N++L A+QE DEVYAQ+TL+P+ +NE +
Sbjct: 106 SSISQAVNQQMLSYKLPPQILCRVLNVNLHADQEMDEVYAQLTLVPDSEKNEKCMEEQLS 165
Query: 65 --PADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLH 122
P+ +P H F K LTASDTSTHGGFSV R+ A +C PPLD +Q P+QELVAKDLH
Sbjct: 166 VPPSSTP----HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLH 221
Query: 123 GYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQS 182
G EWRF+HIFRGQPRRHLLTTGWS FV+ KRLVAGD +FLR ENGEL +G+R ++QQS
Sbjct: 222 GREWRFRHIFRGQPRRHLLTTGWSVFVSYKRLVAGDAVLFLRDENGELRLGIRRASQQQS 281
Query: 183 SMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAV 240
S+PSSV+SS +H GVLA +HAVAT++MF +YY PRTS +F+I +KY+++ N+ F++
Sbjct: 282 SVPSSVLSSHGIHSGVLAAVAHAVATKSMFHIYYNPRTSPTEFVIPYHKYVKSFNHSFSI 341
Query: 241 GMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPW 299
GMR+KMRFE ED+ ERR++GT+VG+ D P W +S+WRS KV WDE A+ R DRVSPW
Sbjct: 342 GMRFKMRFETEDATERRYTGTIVGIGDVDPMRWPNSRWRSFKVGWDEHAAQERQDRVSPW 401
Query: 300 EIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDL 334
EIEPF ++ N + + KR R S P DL
Sbjct: 402 EIEPFTSATGLNALPG--PRVKRLRTSFPSAPTDL 434
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/199 (40%), Positives = 110/199 (55%), Gaps = 25/199 (12%)
Query: 447 KTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADS-DGKSDIA--- 502
K + +C+LFG L+ + P++S TE + S S DG A
Sbjct: 695 KVKGERNCKLFGFSLLKESVCV----DDPINSAMTEDGVSSEGGLHVPSGDGPLQTAHSK 750
Query: 503 ------KEFKEKKQEQVQVSPKE------SQSKQSCLTSNRSRTKVQMQGVAVGRALDLT 550
KE ++ + E ++ + S S RS TKV QG AVGRA+DL+
Sbjct: 751 DSDQSEKELHNHYGHEITLRSVEQEISSYAKLRNSVQASGRSCTKVHKQGNAVGRAVDLS 810
Query: 551 TLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 609
L GYD LI ELE +F+++G L T K W IVYTD+EGD+MLVGDDPW EFCN+V +I I
Sbjct: 811 KLRGYDELIRELEHLFNMEGLLSTPEKGWHIVYTDNEGDIMLVGDDPWQEFCNIVCKILI 870
Query: 610 CSSQDVKKMSPGSKLPMFS 628
C+ ++V+KM+PG MFS
Sbjct: 871 CTQEEVQKMTPG----MFS 885
>gi|148910654|gb|ABR18397.1| unknown [Picea sitchensis]
Length = 920
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 186/332 (56%), Positives = 246/332 (74%), Gaps = 6/332 (1%)
Query: 6 ASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCP 65
+S +Q +NQ++ ++LP +ILCRV+N++L A+QE DEVYAQ+TL+P+ ++E + P
Sbjct: 106 SSISQAVNQQMLSYKLPPQILCRVLNVNLHADQEMDEVYAQLTLVPDSEKSEKCIEEQLP 165
Query: 66 ADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYE 125
P H F K LTASDTSTHGGFSV R+ A +C PPLD +Q P+QELVAKDLHG E
Sbjct: 166 V-PPSSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGRE 224
Query: 126 WRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMP 185
WRF+HIFRGQPRRHLLTTGWS FV+ KRLVAGD +FLR ENGEL +G+R ++QQSS+P
Sbjct: 225 WRFRHIFRGQPRRHLLTTGWSVFVSYKRLVAGDAVLFLRDENGELRLGIRRASQQQSSVP 284
Query: 186 SSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMR 243
SSV+SS +H GVLA +HAVAT++MF ++Y PRTS +F+I +KY+++ N+ F++GMR
Sbjct: 285 SSVLSSHGIHSGVLAAVAHAVATKSMFHIFYNPRTSPTEFVIPYHKYVKSFNHSFSIGMR 344
Query: 244 YKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 302
+KMRFE ED+ ERR++GT+VG+ D P W +S+WRS KV WDE A+ R +RVSPWEIE
Sbjct: 345 FKMRFETEDATERRYTGTIVGIGDVDPMRWPNSEWRSFKVGWDEHAAQERQERVSPWEIE 404
Query: 303 PFVASATPNLVQPVLAKNKRPRLSMEVPPLDL 334
PF ++ N + + KR R S P DL
Sbjct: 405 PFTSATGLNALPG--PRVKRLRTSFPTAPTDL 434
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/218 (38%), Positives = 116/218 (53%), Gaps = 25/218 (11%)
Query: 435 NDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISA-AA 493
++T Q + K + +C+LFG L+ + P+SS TE + S
Sbjct: 684 SETPCPQAKDISKVKGERNCKLFGFSLLKESACV----DDPISSAMTEDGVSSDGGLHVP 739
Query: 494 DSDGKSDIA---------KEFKEKKQEQVQVSPKE------SQSKQSCLTSNRSRTKVQM 538
DG A KE ++ + E ++ + S S RS TKV
Sbjct: 740 PGDGPFQTAHSKHSDQSEKELHNHYGHEITLRSMEQEISSYAKLRNSVQASGRSCTKVHK 799
Query: 539 QGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPW 597
QG AVGRA+DL+ L GYD LI ELE +F+++G L T K W IVYTD+EGD+MLVGDDPW
Sbjct: 800 QGNAVGRAVDLSKLRGYDELIRELEHLFNMEGLLSTPEKGWHIVYTDNEGDIMLVGDDPW 859
Query: 598 HEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGEDIL 635
EFCN+V +I IC+ ++V+KM+PG MFS + +
Sbjct: 860 QEFCNIVCKILICTQEEVQKMTPG----MFSEDAQSCF 893
>gi|379323188|gb|AFD01293.1| auxin response factor 2-1 [Brassica rapa subsp. pekinensis]
Length = 798
Score = 345 bits (884), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 178/330 (53%), Positives = 223/330 (67%), Gaps = 59/330 (17%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE-PT 59
+EQ+EASTNQ Q++PL+ LPSK+LCRV+N+ L AE +TDEVYAQITLLPEP+Q+E
Sbjct: 71 IEQVEASTNQAAEQQMPLYDLPSKLLCRVINVDLKAEVDTDEVYAQITLLPEPNQDENAV 130
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
+ P PR +VHSF K LTASDTSTHGGFSVLR+HA ECLPPLDM++ PTQELVAK
Sbjct: 131 EKEAPPPPPPRFQVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAK 190
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH EWRF+HIFRGQPRRHLL +GWS FV+SKRLVAGD F+FLR
Sbjct: 191 DLHSNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR--------------- 235
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFA 239
+ PS I + ++Y+E+V N ++
Sbjct: 236 ---TSPSEFI-----------------------------------VPFDQYMESVKNNYS 257
Query: 240 VGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSP 298
+GMR+KMRFEGE++PE+RF+GT+VG+ED P W SKWRSLKV+WDE +SI RP+RVSP
Sbjct: 258 IGMRFKMRFEGEEAPEQRFTGTIVGIEDSDPTRWAKSKWRSLKVRWDETSSIPRPERVSP 317
Query: 299 WEIEPFVASATPNLVQPV-LAKNKRPRLSM 327
W+IEP +A P + PV + + KRPR +M
Sbjct: 318 WKIEPALA---PPALSPVPMTRPKRPRSNM 344
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/173 (41%), Positives = 103/173 (59%), Gaps = 7/173 (4%)
Query: 453 SCRLFGIELINHA--TSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 510
+CRLFGI L+N+ T S S++ ++ G D S +K + ++
Sbjct: 571 NCRLFGIPLVNNVNETDSTMSQRNNLNE--NSGFTQMASPKVQDLSDHSKGSKSTNDHRE 628
Query: 511 EQVQVSPKESQSKQS-CLT-SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI 568
+ K+ +K S C T SNRS TKV QG+A+GR++DL+ Y+ LI EL+ +F+
Sbjct: 629 QGRPSQAKQPHAKDSHCKTNSNRSCTKVHKQGIALGRSVDLSKFQNYEELIAELDMLFEF 688
Query: 569 KGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 620
G+L K W IVYTDDE DMMLVGDDPW EFC MV++IFI + ++V+ M+P
Sbjct: 689 NGELMAPKKDWLIVYTDDENDMMLVGDDPWQEFCCMVRKIFIYTKEEVRNMNP 741
>gi|379323244|gb|AFD01321.1| auxin response factor 26 [Brassica rapa subsp. pekinensis]
Length = 555
Score = 344 bits (883), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 162/309 (52%), Positives = 223/309 (72%), Gaps = 14/309 (4%)
Query: 2 EQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE-PTT 60
E+L S N EL Q P+F +PSKI C V +I L E TDE+YA+I+LLP+ S+ E PT+
Sbjct: 43 EELVTSINDELCQLKPVFNIPSKIRCNVFSIKLKVETTTDEIYAEISLLPDTSEVEIPTS 102
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
++ + F+KVL+ASDTS GGF + ++HA ECLPPLDM+ TP+QE+ A D
Sbjct: 103 K----CENNIQNIKCFTKVLSASDTSKKGGFVLNKRHAIECLPPLDMSHLTPSQEINATD 158
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA-R 179
+HG+EW+FKH +G P+RHL T+GW+ F +K+LV GD+F+FLRGENGE VG++ A
Sbjct: 159 IHGHEWKFKHALKGTPKRHLFTSGWNEFAKAKKLVVGDSFIFLRGENGESRVGIKKAAHH 218
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFA 239
QQ ++PSS+IS +SMH GV+ATA +A+ + MFVV+YKPR+SQF+++++K+ + VN KF+
Sbjct: 219 QQENIPSSIISKESMHHGVVATALNAIKNKCMFVVFYKPRSSQFVVNIDKFRDGVNKKFS 278
Query: 240 VGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPW 299
+G R+ M+FEG+D E E F PHWKDS+WR L+VQWDE A+I RPD+VSPW
Sbjct: 279 IGSRFLMKFEGKDFNEIS--------ERFLPHWKDSEWRCLEVQWDEAATIPRPDKVSPW 330
Query: 300 EIEPFVASA 308
EIEP S+
Sbjct: 331 EIEPLTHSS 339
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/210 (37%), Positives = 117/210 (55%), Gaps = 40/210 (19%)
Query: 431 SKPN-NDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTI 489
SKPN N+ +++ ++ T TS RLFG++L KVP + + I
Sbjct: 377 SKPNYNEQMVQAMKETSTTTATTSYRLFGVDL-----------KVPAKTKDSIEPI---- 421
Query: 490 SAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDL 549
+S KS I+K F+E+K + +Q RS TKV+M+G A+ R +DL
Sbjct: 422 ----NSYKKSKISKIFEEEKVDHIQT---------------RSHTKVRMEG-AMERTVDL 461
Query: 550 TTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 609
+ GY+ LIDELE +FDIKG+LH +W+IV+ + +GD+ML+GDDPW +FCN + IFI
Sbjct: 462 SIFDGYNQLIDELERLFDIKGKLHIHNQWKIVFINADGDIMLLGDDPWPKFCNTAEEIFI 521
Query: 610 CSSQDVKKMSPGSKLPMFSIEGEDILLSSD 639
CS D K +K EG+ IL +++
Sbjct: 522 CSKNDAKVGDADNKFS----EGDPILTTTN 547
>gi|291196879|emb|CAX63130.1| ARF-L1 protein [Ephedra distachya]
Length = 905
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 168/337 (49%), Positives = 227/337 (67%), Gaps = 8/337 (2%)
Query: 1 MEQLEASTNQELNQRIPL--FRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEP---SQ 55
+EQL ++ Q+ P+ + LP +I CRV+N++L+A+QETDEV+AQ+TL+PEP
Sbjct: 67 IEQLSSTFKQQPPLPPPMSPYDLPPQIFCRVLNVNLLADQETDEVFAQVTLVPEPEPVGD 126
Query: 56 NEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQE 115
N + + +P +H F K LTASDTSTHGGFSV R+ A +C PPLD Q P+QE
Sbjct: 127 NFQDEENQNASVLSKPTLHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYTQQRPSQE 186
Query: 116 LVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR 175
L+AKDLHG EW+F+HI+RGQPRRHLLTTGWS FV+ K L +FLRGENGEL +G+R
Sbjct: 187 LLAKDLHGVEWKFRHIYRGQPRRHLLTTGWSVFVSPKVLSLXYAVLFLRGENGELRLGIR 246
Query: 176 CLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEA 233
R+ SS+PSSV S Q+++L V+A A++AVAT++MF ++Y PR S +FII KY+ +
Sbjct: 247 RNNRKLSSVPSSVFSDQNVYLSVIAAATNAVATKSMFHIFYNPRASPAEFIIPYQKYVRS 306
Query: 234 VNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITR 292
VG R++M+FE ED+ E+R++G V + D P W SKWRSLKV WDE + R
Sbjct: 307 CKQSLLVGTRFRMKFESEDTAEKRYTGIVTSIGDADPVKWPGSKWRSLKVDWDEHSLNER 366
Query: 293 PDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEV 329
+RVSPWEIEP +A + N+ K R L + V
Sbjct: 367 QERVSPWEIEPSIAVSGVNVSSGTRCKRLRANLPVSV 403
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 108/188 (57%), Gaps = 19/188 (10%)
Query: 453 SCRLFGIELINHATSSAPSEK--------VPVSSLTTEGHIISTISAAADSDGKSDIAKE 504
SC+LFGI L A +EK + + S TT+ HI ++ + + K
Sbjct: 724 SCKLFGISLTEELPCVAVTEKGDFGKHEGMDIKSFTTKSHI--NFGSSPNYFSHPEPFKG 781
Query: 505 FKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEE 564
FKE+ ++S ++ S T R TKV QG VGRA+DL+ GYD LI+ELE
Sbjct: 782 FKER----AKLSTEQEISFPIQPTIVRKCTKVHKQGSVVGRAIDLSKFDGYDQLINELER 837
Query: 565 MFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSK 623
+FD++G L+ K W++VYTD+E D+MLVGDDPW EFCN+V +I I + +V+K+ PG
Sbjct: 838 LFDMEGLLNNPEKGWQVVYTDNEDDVMLVGDDPWQEFCNIVCKILIYTHDEVQKLRPG-- 895
Query: 624 LPMFSIEG 631
MFS E
Sbjct: 896 --MFSDEA 901
>gi|291196863|emb|CAX63111.1| ARF4 protein [Cabomba aquatica]
Length = 709
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 162/317 (51%), Positives = 222/317 (70%), Gaps = 11/317 (3%)
Query: 15 RIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKV- 73
R+ + LP +I CRV+++ L A+QE D+VYAQ+TLLPE NE + + ++
Sbjct: 96 RMLTYDLPPQIFCRVLDVKLHADQENDDVYAQVTLLPELESNEVCGKNLEEDEESGSEIL 155
Query: 74 -----HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRF 128
H F K LTASDTSTHGGFSV R+ A +C PPLD +Q P+QELVAKDLHG EW+F
Sbjct: 156 CKTIPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWKF 215
Query: 129 KHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSV 188
+HI+RGQPRRHLLTTGWS FV K LV+GD +FLRGE+GEL +G+R +R SS+P SV
Sbjct: 216 RHIYRGQPRRHLLTTGWSVFVNQKGLVSGDAVLFLRGEDGELRLGIRRASRPPSSIPYSV 275
Query: 189 ISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKM 246
+SSQ +HL +L+ A++A++T++MF V+Y PR S+F+I KY+++++ ++GMR+KM
Sbjct: 276 LSSQGLHLSILSPAANALSTKSMFHVFYSPRASPSEFVIPYWKYVKSLSRPISIGMRFKM 335
Query: 247 RFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 305
R E EDS E+R +G + G D P W +SKWR L V+WD+ + + R +RVSPWEIEP +
Sbjct: 336 RLEMEDSAEKRCTGAITGACDVDPLRWPNSKWRCLMVRWDDSSLVGRQERVSPWEIEPSL 395
Query: 306 ASATPNLVQPVLAKNKR 322
+ P L PV + KR
Sbjct: 396 --SLPALSCPVAPRIKR 410
>gi|224128584|ref|XP_002320368.1| predicted protein [Populus trichocarpa]
gi|222861141|gb|EEE98683.1| predicted protein [Populus trichocarpa]
Length = 392
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 163/318 (51%), Positives = 226/318 (71%), Gaps = 19/318 (5%)
Query: 1 MEQLEAST-----NQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQ 55
MEQ+ ST N+E +P++ LP KILC+VV++ L AE TDEV+A+ITLLP +
Sbjct: 32 MEQVLLSTVAARMNEEGKMEMPIYDLPYKILCKVVHVELKAEAGTDEVFARITLLPVAEE 91
Query: 56 NEPTTPDPCPADSPRPKVH------SFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQ 109
+E ++ D +H SF+K LT SDT THGGFSV ++HA +CLPPLD +Q
Sbjct: 92 DELSSNK----DGKSLPLHRKTCARSFTKKLTPSDTKTHGGFSVPKRHADQCLPPLDKSQ 147
Query: 110 STPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGE 169
P QEL+AKDLHG+EW FKHI+RGQP+RHL+T+GWSTFV+SKRLVAGD+F+FLRGE+GE
Sbjct: 148 QPPVQELLAKDLHGFEWCFKHIYRGQPKRHLITSGWSTFVSSKRLVAGDSFIFLRGESGE 207
Query: 170 LHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISL 227
L VGVR + ++++ ++++SS SM LG+L++ASHA+ T +MF +Y+ P TS +FII
Sbjct: 208 LRVGVRRAMKLENNLSANILSSHSMQLGILSSASHAITTGSMFTIYFHPWTSPAEFIIPY 267
Query: 228 NKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFS-PHWKDSKWRSLKVQWDE 286
++Y+++ ++ G R++M FEGE+ E+RF GTVVG ED W +S+WR LKV+WD
Sbjct: 268 DQYMKSAEIDYSAGTRFRMLFEGEECAEQRFEGTVVGTEDVDHIRWPNSEWRILKVKWDA 327
Query: 287 PAS-ITRPDRVSPWEIEP 303
+ +RVSPW IEP
Sbjct: 328 ASEPFVHQERVSPWNIEP 345
>gi|414877790|tpg|DAA54921.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
Length = 775
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 183/384 (47%), Positives = 231/384 (60%), Gaps = 79/384 (20%)
Query: 1 MEQLEASTNQELNQR-IPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPT 59
+EQ+EASTNQ Q+ PL+ LP KI C+++NI L E +TDEVYAQ+TLLP+ Q+E T
Sbjct: 51 IEQVEASTNQLAEQQGTPLYNLPWKIPCKLMNIELKVEPDTDEVYAQLTLLPDKKQDENT 110
Query: 60 T----------PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQ 109
+ P PA + P +HSF K LTASDTSTHGGFSVLR+HA ECLPPLDM+Q
Sbjct: 111 STTVEEEEVVVPPALPATNEGPHIHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQ 170
Query: 110 STPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGE 169
P QELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV++KRLVAGD F+FLR E
Sbjct: 171 HPPNQELVAKDLHGAEWRFRHIFRGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRTSPAE 230
Query: 170 LHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNK 229
FVV S ++
Sbjct: 231 ------------------------------------------FVV-----------SRDR 237
Query: 230 YLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPA 288
Y E++ +++GMR+KMRFEGE++ E+RF+GT+VG+ P W DSKWRSLKV+WDEP+
Sbjct: 238 YYESLKRNYSIGMRFKMRFEGEEAAEQRFTGTIVGIGASDPSGWADSKWRSLKVRWDEPS 297
Query: 289 SITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQ 348
SI+RP+RVSPW+IEP S +P V P+ + KR R S+ P D+ + S +A
Sbjct: 298 SISRPERVSPWQIEP---SVSPCHVNPLPVRFKRSRSSVNALPSDVSTVTREVTSKVMAD 354
Query: 349 S---------HN--LTQLSVTAED 361
S HN TQL+V D
Sbjct: 355 SQQNSLTRALHNQGRTQLTVRYHD 378
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 115/197 (58%), Gaps = 25/197 (12%)
Query: 445 GRKTETGTSCRLFGIELINHATSSAPSEKVPV---SSLTTEGHIISTISAAADS------ 495
G + GTS +LFGI L +P + P+ S+ +G + ++ S +
Sbjct: 549 GVQKSKGTSFKLFGIPL------GSPEKSEPLVSPPSVAYDGKLQTSPSEKGNQLDVVEV 602
Query: 496 DGKSDIAKEFK-------EKKQEQVQVSPKESQSKQSCL--TSNRSRTKVQMQGVAVGRA 546
D S +K K + E Q SP+ + + Q+ + +S RS KV QG A+GR+
Sbjct: 603 DNCSHPSKTVKPLDGPQSDSITENNQPSPEATLNIQNKVQSSSTRSCKKVHKQGSALGRS 662
Query: 547 LDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVK 605
+DLT YD LI EL++MFD G+L + K W +VYTD+EGD+MLVGDDPW+EFC+MV
Sbjct: 663 IDLTKFACYDELIAELDQMFDFDGELKSPCKSWLVVYTDNEGDIMLVGDDPWNEFCDMVH 722
Query: 606 RIFICSSQDVKKMSPGS 622
+IFI + ++V++M+PG+
Sbjct: 723 KIFIYTREEVERMNPGA 739
>gi|359479063|ref|XP_002285019.2| PREDICTED: auxin response factor 4-like [Vitis vinifera]
gi|297746231|emb|CBI16287.3| unnamed protein product [Vitis vinifera]
Length = 798
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 163/334 (48%), Positives = 213/334 (63%), Gaps = 41/334 (12%)
Query: 16 IPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEP---------------------S 54
I F LP +I CRVVN+ L+A +E DEVY Q+TLLP+P
Sbjct: 96 ISTFDLPPQIFCRVVNVQLLANKENDEVYTQVTLLPQPELAGINLEGKELEGLGVDEEGG 155
Query: 55 QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQ 114
PT P H F K LTASDTSTHGGFSV R+ A +C PPLD Q P+Q
Sbjct: 156 GGSPTKSTP----------HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQ 205
Query: 115 ELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGV 174
ELVAKDLHG EWRF+HI+RGQPRRHLLTTGWS FV+ K LV+GD +FLRGE GEL +G+
Sbjct: 206 ELVAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGEGGELRLGI 265
Query: 175 RCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLE 232
R R ++ +P S+I +Q+ + VL+ A++AVAT++MF V+Y PR S +F+I KY++
Sbjct: 266 RRAVRPRNGLPDSIIGNQNSYPNVLSLAANAVATKSMFHVFYSPRASHAEFVIPYQKYVK 325
Query: 233 AVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASIT 291
++ N ++G R+KMR++ +DSPERR SG V G+ D P+ W +SKWR L V+WD+
Sbjct: 326 SITNPISIGTRFKMRYDMDDSPERRSSGVVTGIGDLDPYRWPNSKWRCLMVRWDDDIVSD 385
Query: 292 RPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRL 325
+RVSPWEI+P V+ P L+ PRL
Sbjct: 386 PQERVSPWEIDPSVS-------LPPLSIQSSPRL 412
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 67/95 (70%), Gaps = 1/95 (1%)
Query: 528 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDE 586
+ RS TKV QG VGRA+DL+ L GY L ELE +F ++G L K W+I+YTD E
Sbjct: 667 SGKRSCTKVHKQGNLVGRAIDLSRLNGYGDLFSELERLFGMEGLLRDPDKGWQILYTDSE 726
Query: 587 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPG 621
DMM+VGDDPWHEFCN+V +I I + ++V+KM+ G
Sbjct: 727 NDMMVVGDDPWHEFCNVVSKIHIYTQEEVEKMTIG 761
>gi|414877788|tpg|DAA54919.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
Length = 771
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 173/346 (50%), Positives = 218/346 (63%), Gaps = 68/346 (19%)
Query: 1 MEQLEASTNQELNQR-IPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPT 59
+EQ+EASTNQ Q+ PL+ LP KI C+++NI L E +TDEVYAQ+TLLP+ Q+E T
Sbjct: 51 IEQVEASTNQLAEQQGTPLYNLPWKIPCKLMNIELKVEPDTDEVYAQLTLLPDKKQDENT 110
Query: 60 T----------PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQ 109
+ P PA + P +HSF K LTASDTSTHGGFSVLR+HA ECLPPLDM+Q
Sbjct: 111 STTVEEEEVVVPPALPATNEGPHIHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQ 170
Query: 110 STPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGE 169
P QELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV++KRLVAGD F+FLR E
Sbjct: 171 HPPNQELVAKDLHGAEWRFRHIFRGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRTSPAE 230
Query: 170 LHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNK 229
FVV S ++
Sbjct: 231 ------------------------------------------FVV-----------SRDR 237
Query: 230 YLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPA 288
Y E++ +++GMR+KMRFEGE++ E+RF+GT+VG+ P W DSKWRSLKV+WDEP+
Sbjct: 238 YYESLKRNYSIGMRFKMRFEGEEAAEQRFTGTIVGIGASDPSGWADSKWRSLKVRWDEPS 297
Query: 289 SITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDL 334
SI+RP+RVSPW+IEP S +P V P+ + KR R S+ P D+
Sbjct: 298 SISRPERVSPWQIEP---SVSPCHVNPLPVRFKRSRSSVNALPSDV 340
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 115/197 (58%), Gaps = 25/197 (12%)
Query: 445 GRKTETGTSCRLFGIELINHATSSAPSEKVPV---SSLTTEGHIISTISAAADS------ 495
G + GTS +LFGI L +P + P+ S+ +G + ++ S +
Sbjct: 545 GVQKSKGTSFKLFGIPL------GSPEKSEPLVSPPSVAYDGKLQTSPSEKGNQLDVVEV 598
Query: 496 DGKSDIAKEFK-------EKKQEQVQVSPKESQSKQSCL--TSNRSRTKVQMQGVAVGRA 546
D S +K K + E Q SP+ + + Q+ + +S RS KV QG A+GR+
Sbjct: 599 DNCSHPSKTVKPLDGPQSDSITENNQPSPEATLNIQNKVQSSSTRSCKKVHKQGSALGRS 658
Query: 547 LDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVK 605
+DLT YD LI EL++MFD G+L + K W +VYTD+EGD+MLVGDDPW+EFC+MV
Sbjct: 659 IDLTKFACYDELIAELDQMFDFDGELKSPCKSWLVVYTDNEGDIMLVGDDPWNEFCDMVH 718
Query: 606 RIFICSSQDVKKMSPGS 622
+IFI + ++V++M+PG+
Sbjct: 719 KIFIYTREEVERMNPGA 735
>gi|414877791|tpg|DAA54922.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
Length = 652
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 173/346 (50%), Positives = 218/346 (63%), Gaps = 68/346 (19%)
Query: 1 MEQLEASTNQELNQR-IPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPT 59
+EQ+EASTNQ Q+ PL+ LP KI C+++NI L E +TDEVYAQ+TLLP+ Q+E T
Sbjct: 51 IEQVEASTNQLAEQQGTPLYNLPWKIPCKLMNIELKVEPDTDEVYAQLTLLPDKKQDENT 110
Query: 60 T----------PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQ 109
+ P PA + P +HSF K LTASDTSTHGGFSVLR+HA ECLPPLDM+Q
Sbjct: 111 STTVEEEEVVVPPALPATNEGPHIHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQ 170
Query: 110 STPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGE 169
P QELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV++KRLVAGD F+FLR E
Sbjct: 171 HPPNQELVAKDLHGAEWRFRHIFRGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRTSPAE 230
Query: 170 LHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNK 229
FVV S ++
Sbjct: 231 ------------------------------------------FVV-----------SRDR 237
Query: 230 YLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPA 288
Y E++ +++GMR+KMRFEGE++ E+RF+GT+VG+ P W DSKWRSLKV+WDEP+
Sbjct: 238 YYESLKRNYSIGMRFKMRFEGEEAAEQRFTGTIVGIGASDPSGWADSKWRSLKVRWDEPS 297
Query: 289 SITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDL 334
SI+RP+RVSPW+IEP S +P V P+ + KR R S+ P D+
Sbjct: 298 SISRPERVSPWQIEP---SVSPCHVNPLPVRFKRSRSSVNALPSDV 340
>gi|414877787|tpg|DAA54918.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
Length = 777
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 183/384 (47%), Positives = 231/384 (60%), Gaps = 79/384 (20%)
Query: 1 MEQLEASTNQELNQR-IPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPT 59
+EQ+EASTNQ Q+ PL+ LP KI C+++NI L E +TDEVYAQ+TLLP+ Q+E T
Sbjct: 53 IEQVEASTNQLAEQQGTPLYNLPWKIPCKLMNIELKVEPDTDEVYAQLTLLPDKKQDENT 112
Query: 60 T----------PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQ 109
+ P PA + P +HSF K LTASDTSTHGGFSVLR+HA ECLPPLDM+Q
Sbjct: 113 STTVEEEEVVVPPALPATNEGPHIHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQ 172
Query: 110 STPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGE 169
P QELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV++KRLVAGD F+FLR E
Sbjct: 173 HPPNQELVAKDLHGAEWRFRHIFRGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRTSPAE 232
Query: 170 LHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNK 229
FVV S ++
Sbjct: 233 ------------------------------------------FVV-----------SRDR 239
Query: 230 YLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPA 288
Y E++ +++GMR+KMRFEGE++ E+RF+GT+VG+ P W DSKWRSLKV+WDEP+
Sbjct: 240 YYESLKRNYSIGMRFKMRFEGEEAAEQRFTGTIVGIGASDPSGWADSKWRSLKVRWDEPS 299
Query: 289 SITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQ 348
SI+RP+RVSPW+IEP S +P V P+ + KR R S+ P D+ + S +A
Sbjct: 300 SISRPERVSPWQIEP---SVSPCHVNPLPVRFKRSRSSVNALPSDVSTVTREVTSKVMAD 356
Query: 349 S---------HN--LTQLSVTAED 361
S HN TQL+V D
Sbjct: 357 SQQNSLTRALHNQGRTQLTVRYHD 380
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 115/197 (58%), Gaps = 25/197 (12%)
Query: 445 GRKTETGTSCRLFGIELINHATSSAPSEKVPV---SSLTTEGHIISTISAAADS------ 495
G + GTS +LFGI L +P + P+ S+ +G + ++ S +
Sbjct: 551 GVQKSKGTSFKLFGIPL------GSPEKSEPLVSPPSVAYDGKLQTSPSEKGNQLDVVEV 604
Query: 496 DGKSDIAKEFK-------EKKQEQVQVSPKESQSKQSCL--TSNRSRTKVQMQGVAVGRA 546
D S +K K + E Q SP+ + + Q+ + +S RS KV QG A+GR+
Sbjct: 605 DNCSHPSKTVKPLDGPQSDSITENNQPSPEATLNIQNKVQSSSTRSCKKVHKQGSALGRS 664
Query: 547 LDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVK 605
+DLT YD LI EL++MFD G+L + K W +VYTD+EGD+MLVGDDPW+EFC+MV
Sbjct: 665 IDLTKFACYDELIAELDQMFDFDGELKSPCKSWLVVYTDNEGDIMLVGDDPWNEFCDMVH 724
Query: 606 RIFICSSQDVKKMSPGS 622
+IFI + ++V++M+PG+
Sbjct: 725 KIFIYTREEVERMNPGA 741
>gi|255570833|ref|XP_002526369.1| Auxin response factor, putative [Ricinus communis]
gi|223534328|gb|EEF36040.1| Auxin response factor, putative [Ricinus communis]
Length = 810
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 164/337 (48%), Positives = 216/337 (64%), Gaps = 22/337 (6%)
Query: 16 IPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTP-------------- 61
+P F L +I C+VVN+ L+A +E DEVY Q+ LLP+P P
Sbjct: 88 MPTFDLQPQIFCKVVNVQLLANKENDEVYTQLALLPQPELVGPNLEVKELEELGVDEEGG 147
Query: 62 DPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDL 121
PA S H F K LTASDTSTHGGFSV R+ A +C PPLD Q P+QELVAKDL
Sbjct: 148 GGLPAKS---TPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDL 204
Query: 122 HGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQ 181
HG EWRF+HI+RGQPRRHLLTTGWS FV+ K LV+GD +FLRGE+GEL +G+R R +
Sbjct: 205 HGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGEDGELRLGIRRAVRPR 264
Query: 182 SSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFA 239
+ +P SVI Q+ + VL+ ++A++T++MF V Y PR S F++ KY++++ N
Sbjct: 265 NGLPDSVIGKQNSYPSVLSVVANAISTKSMFNVLYSPRASHADFVVPYKKYMKSIMNPVC 324
Query: 240 VGMRYKMRFEGEDSPERRFSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSP 298
+G R+KMRFE +DSPERR SG V G+ D +P+ W +SKWR L V+WDE +RVSP
Sbjct: 325 IGTRFKMRFEMDDSPERRCSGVVTGISDLNPYRWPNSKWRCLMVRWDEDIGNDHQERVSP 384
Query: 299 WEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLP 335
WEI+P V + P L + K+ R S++ P D P
Sbjct: 385 WEIDPSV--SLPPLSIQSSPRLKKLRTSLQATPPDNP 419
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 53/104 (50%), Positives = 71/104 (68%), Gaps = 1/104 (0%)
Query: 519 ESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK- 577
ES + S + RS TKV QG VGRA+DL+ L GY L+ ELE +F ++G L K
Sbjct: 654 ESPNPNSQNSGKRSCTKVHKQGSLVGRAIDLSRLNGYSDLLSELERLFSMEGLLQDPNKG 713
Query: 578 WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPG 621
W I+YTD E D+M+VGDDPWHEFCN+V +I I + ++V+KM+ G
Sbjct: 714 WRILYTDSENDVMVVGDDPWHEFCNVVSKIHIYTQEEVEKMTIG 757
>gi|414877789|tpg|DAA54920.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
Length = 661
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 173/346 (50%), Positives = 218/346 (63%), Gaps = 68/346 (19%)
Query: 1 MEQLEASTNQELNQR-IPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPT 59
+EQ+EASTNQ Q+ PL+ LP KI C+++NI L E +TDEVYAQ+TLLP+ Q+E T
Sbjct: 51 IEQVEASTNQLAEQQGTPLYNLPWKIPCKLMNIELKVEPDTDEVYAQLTLLPDKKQDENT 110
Query: 60 T----------PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQ 109
+ P PA + P +HSF K LTASDTSTHGGFSVLR+HA ECLPPLDM+Q
Sbjct: 111 STTVEEEEVVVPPALPATNEGPHIHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQ 170
Query: 110 STPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGE 169
P QELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV++KRLVAGD F+FLR E
Sbjct: 171 HPPNQELVAKDLHGAEWRFRHIFRGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRTSPAE 230
Query: 170 LHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNK 229
FVV S ++
Sbjct: 231 ------------------------------------------FVV-----------SRDR 237
Query: 230 YLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPA 288
Y E++ +++GMR+KMRFEGE++ E+RF+GT+VG+ P W DSKWRSLKV+WDEP+
Sbjct: 238 YYESLKRNYSIGMRFKMRFEGEEAAEQRFTGTIVGIGASDPSGWADSKWRSLKVRWDEPS 297
Query: 289 SITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDL 334
SI+RP+RVSPW+IEP S +P V P+ + KR R S+ P D+
Sbjct: 298 SISRPERVSPWQIEP---SVSPCHVNPLPVRFKRSRSSVNALPSDV 340
>gi|291196867|emb|CAX63115.1| ARF4 protein [Cabomba aquatica]
Length = 605
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 159/308 (51%), Positives = 217/308 (70%), Gaps = 11/308 (3%)
Query: 24 KILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKV------HSFS 77
+I CRV+++ L A+QE D+VYAQ+TLLPE NE + + ++ H F
Sbjct: 1 QIFCRVLDVKLHADQENDDVYAQVTLLPELESNEVCGKNLEEDEESGSEILCKTIPHMFC 60
Query: 78 KVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPR 137
K LTASDTSTHGGFSV R+ A +C PPLD +Q P+QELVAKDLHG EW+F+HI+RGQPR
Sbjct: 61 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWKFRHIYRGQPR 120
Query: 138 RHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLG 197
RHLLTTGWS FV K LV+GD +FLRGE+GEL +G+R +R SS+P SV+SSQ +HL
Sbjct: 121 RHLLTTGWSVFVNQKGLVSGDAVLFLRGEDGELRLGIRRASRPPSSIPYSVLSSQGLHLS 180
Query: 198 VLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPE 255
+L+ A++A++T++MF V+Y PR S+F+I KY+++++ ++GMR+KMR E EDS E
Sbjct: 181 ILSPAANALSTKSMFHVFYSPRASPSEFVIPYWKYVKSLSRPISIGMRFKMRLEMEDSAE 240
Query: 256 RRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQ 314
+R +G + G D P W +SKWR L V+WD+ + + R +RVSPWEIEP + + P L
Sbjct: 241 KRCTGAITGACDVDPLRWPNSKWRCLMVRWDDSSLVGRQERVSPWEIEPSL--SLPALSC 298
Query: 315 PVLAKNKR 322
PV + KR
Sbjct: 299 PVAPRIKR 306
>gi|414587105|tpg|DAA37676.1| TPA: hypothetical protein ZEAMMB73_822305 [Zea mays]
Length = 285
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 158/236 (66%), Positives = 187/236 (79%), Gaps = 1/236 (0%)
Query: 1 MEQLEASTN-QELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPT 59
MEQLEAS + Q+L+Q +P+F LP KILCRVVN+ L AE ++DEVYAQI L PE QNE T
Sbjct: 49 MEQLEASAHHQQLDQYLPMFDLPPKILCRVVNVELRAEADSDEVYAQIMLQPEADQNELT 108
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
+ D P + + HSF K LTASDTSTHGGFSVLR+HA ECLP LDM+Q+ P QELVAK
Sbjct: 109 SLDAEPQEREKCTAHSFCKTLTASDTSTHGGFSVLRRHAEECLPQLDMSQNPPCQELVAK 168
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLHG EW F+HIFRGQP+RHLLTTGWS FV+SKRLV+GD F+F+RGENGEL VGVR L R
Sbjct: 169 DLHGTEWHFRHIFRGQPKRHLLTTGWSVFVSSKRLVSGDAFIFMRGENGELRVGVRRLMR 228
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVN 235
Q +SMPSSVISS SMHLGVLATASHA++T T+F V+YKPR ++ L L+ +
Sbjct: 229 QVNSMPSSVISSHSMHLGVLATASHAISTGTLFSVFYKPRFDVVLLYLYICLQCTS 284
>gi|301793219|emb|CBA12000.1| putative auxin response factor 3 [Illicium parviflorum]
Length = 837
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 161/338 (47%), Positives = 221/338 (65%), Gaps = 18/338 (5%)
Query: 14 QRIPLFR-----LPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADS 68
++ P FR +P + CRV+N++L AE TDEVYAQ++L+PEP + + +
Sbjct: 61 EQAPKFRAFAHDIPPHLFCRVLNVNLHAEIATDEVYAQVSLVPEPEVGAKSLDEDGEGNG 120
Query: 69 PRPKV--------HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
++ H F K LTASDTSTHGGFSV R+ A +C P LD Q P+QELVAKD
Sbjct: 121 EEEEIEELSTATPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPALDYKQQRPSQELVAKD 180
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
LHG EW+F+HI+RGQPRRHLLTTGWS+FV K+LV+GD +FLRGENGEL +G+R AR
Sbjct: 181 LHGVEWKFRHIYRGQPRRHLLTTGWSSFVNQKKLVSGDAVLFLRGENGELRLGIRRAARP 240
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKF 238
+ +P S++ SQ+++L LA S AV+T++MF VYY PR S +FII K+ +++N
Sbjct: 241 EGGVPYSILCSQNLNLSALAAVSTAVSTKSMFHVYYNPRASPAEFIIPYRKFSKSINQPL 300
Query: 239 AVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVS 297
++G R+KMR+E ED+ E+R +G + G+ D P W SKWR L V+WDE A D+VS
Sbjct: 301 SIGTRFKMRYETEDATEQRPTGLITGIGDIDPVRWPGSKWRCLMVRWDEEAGHYCQDKVS 360
Query: 298 PWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLP 335
PWEIEP + + P+ +K+PR+S+ D P
Sbjct: 361 PWEIEP--SGSLSGFSSPLTPGSKKPRISLPSIKADFP 396
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/173 (43%), Positives = 99/173 (57%), Gaps = 17/173 (9%)
Query: 451 GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 510
GTSCRLFG L A + + PV+S + + + T A+S KQ
Sbjct: 647 GTSCRLFGFPLTKEAPVANTVDPTPVASQSAKDLDLKTCLPTANS---------MIPGKQ 697
Query: 511 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 570
+V + S T+ RS TKV QG VGRA+DL+ L GYD LI ELE +F+++G
Sbjct: 698 LHAEV-------QSSTKTAGRSCTKVHRQGNLVGRAIDLSKLDGYDDLITELERLFNMEG 750
Query: 571 QLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 622
L+ K W++VYTDDE DMMLVGDDPW EFCN+V +I I + +V+ M PG
Sbjct: 751 LLNDPGKGWQVVYTDDEDDMMLVGDDPWQEFCNIVSKILIYTHDEVELMVPGG 803
>gi|302802197|ref|XP_002982854.1| hypothetical protein SELMODRAFT_179736 [Selaginella moellendorffii]
gi|300149444|gb|EFJ16099.1| hypothetical protein SELMODRAFT_179736 [Selaginella moellendorffii]
Length = 824
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 167/330 (50%), Positives = 225/330 (68%), Gaps = 11/330 (3%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ AST +E + IP + LP ++C++ NI L A+ ETDEVYAQ+TL P +Q + +
Sbjct: 55 EQVAASTQKEADADIPSYPNLPPHLVCQLHNITLHADTETDEVYAQMTLQPMNAQEKDSF 114
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
R F K LTASDTSTHGGFS+ R+ A + PPLD +Q P QE+VA+D
Sbjct: 115 MVSDLGRQNRQPSEYFCKTLTASDTSTHGGFSIPRRAAEKVFPPLDFSQQPPAQEIVARD 174
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
LH EWRF+HI+RGQPRRHLLTTGWS FV++KRL GD +F+R E G+L +G+R RQ
Sbjct: 175 LHDTEWRFRHIYRGQPRRHLLTTGWSVFVSAKRLQTGDAVLFIRDEKGQLLLGIRRANRQ 234
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKF 238
Q+SMP S++S+ SM++G+LA A+HA +T + F ++Y PR S+F+I L+KY AV N
Sbjct: 235 QASMPLSLLSTDSMYIGILAAAAHANSTSSRFTIFYNPRASPSEFVIPLSKYYNAVYNNM 294
Query: 239 AV--GMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
V GMR++M+FE E+S RR +GT+VG D P W +S WRSLKV+WDEPA+ + R
Sbjct: 295 QVSPGMRFRMQFETEESGIRRHTGTIVGSGDLDPVRWPNSHWRSLKVEWDEPAAGEKQQR 354
Query: 296 VSPWEIEPFVASATPNLV-QPVLA-KNKRP 323
+S WEIEP ++TP LV P ++KRP
Sbjct: 355 ISLWEIEP---ASTPYLVCSPSFTFRSKRP 381
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 588
R+ TKV G +VGR+LDLT L YD L EL MF ++GQL R+ W++V+ D+E D
Sbjct: 706 RTFTKVYKTG-SVGRSLDLTRLNCYDGLRSELARMFGLEGQLEDPHRSGWQLVFVDNEND 764
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++LVGDDPW EF + V+ I I S ++ M+
Sbjct: 765 VLLVGDDPWEEFVSCVRCIKIMSPAELSHMN 795
>gi|302818562|ref|XP_002990954.1| hypothetical protein SELMODRAFT_451392 [Selaginella moellendorffii]
gi|300141285|gb|EFJ07998.1| hypothetical protein SELMODRAFT_451392 [Selaginella moellendorffii]
Length = 824
Score = 321 bits (822), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 167/330 (50%), Positives = 225/330 (68%), Gaps = 11/330 (3%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ AST +E + IP + LP ++C++ NI L A+ ETDEVYAQ+TL P +Q + +
Sbjct: 55 EQVAASTQKEADADIPSYPNLPPHLVCQLHNITLHADTETDEVYAQMTLQPMNAQEKDSF 114
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
R F K LTASDTSTHGGFS+ R+ A + PPLD +Q P QE+VA+D
Sbjct: 115 MVSDLGRQNRQPSEYFCKTLTASDTSTHGGFSIPRRAAEKVFPPLDFSQQPPAQEIVARD 174
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
LH EWRF+HI+RGQPRRHLLTTGWS FV++KRL GD +F+R E G+L +G+R RQ
Sbjct: 175 LHDTEWRFRHIYRGQPRRHLLTTGWSVFVSAKRLQTGDAVLFIRDEKGQLLLGIRRANRQ 234
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKF 238
Q+SMP S++S+ SM++G+LA A+HA +T + F ++Y PR S+F+I L+KY AV N
Sbjct: 235 QASMPLSLLSTDSMYIGILAAAAHANSTSSRFTIFYNPRASPSEFVIPLSKYYNAVYNNM 294
Query: 239 AV--GMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
V GMR++M+FE E+S RR +GT+VG D P W +S WRSLKV+WDEPA+ + R
Sbjct: 295 QVSPGMRFRMQFETEESGIRRHTGTIVGSGDLDPVRWPNSHWRSLKVEWDEPAAGEKQQR 354
Query: 296 VSPWEIEPFVASATPNLV-QPVLA-KNKRP 323
+S WEIEP ++TP LV P ++KRP
Sbjct: 355 ISLWEIEP---ASTPYLVCSPSFTFRSKRP 381
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 588
R+ TKV G +VGR+LDLT L YD L EL MF ++GQL R+ W++V+ D+E D
Sbjct: 706 RTFTKVYKTG-SVGRSLDLTRLNCYDGLRSELARMFGLEGQLEDPHRSGWQLVFVDNEND 764
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++LVGDDPW EF + V+ I I S ++ M+
Sbjct: 765 VLLVGDDPWEEFVSCVRCIKIMSPSELSHMN 795
>gi|36939187|gb|AAQ86958.1| ETTIN-like auxin response factor [Triticum aestivum]
Length = 645
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 161/343 (46%), Positives = 215/343 (62%), Gaps = 14/343 (4%)
Query: 25 ILCRVVNIHLMAEQETDEVYAQITLLPEPSQ-----NEPTTPDPCPADSPRPKV------ 73
+ CRVV++ L A+ TDEVYAQ++LLPE + E T D K
Sbjct: 27 VFCRVVDVTLHADASTDEVYAQLSLLPENEEVVRRMREATEDGSGGEDGETVKQRFARMP 86
Query: 74 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 133
H F K LTASDTSTHGGFSV R+ A +C PPLD +Q P QELVAKDLHG EW+F+HI+R
Sbjct: 87 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPCQELVAKDLHGTEWKFRHIYR 146
Query: 134 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQS 193
GQPRRHLLTTGWS FV K+LV+GD +FLRG++GEL +GVR + ++ + SQ
Sbjct: 147 GQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGVRRAVQLKNGSAFPALYSQC 206
Query: 194 MHLGVLATASHAVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRFEGE 251
+LG LA +HAVAT++MF ++Y PR SQ FI+ K+ ++ + F+VG R+KMR+E E
Sbjct: 207 SNLGTLANVAHAVATKSMFQIFYNPRLSQSEFIVPYWKFTKSFSQPFSVGSRFKMRYESE 266
Query: 252 DSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPN 311
D+ ERR++G + G D P W+ SKW+ L V+WD+ RP+RVSPWEIE +++ +
Sbjct: 267 DAAERRYTGIITGTGDADPMWRGSKWKCLLVRWDDDGEFRRPNRVSPWEIELTSSASGSH 326
Query: 312 LVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQ 354
L P +K +P L P +P P A AQ + Q
Sbjct: 327 LAAPT-SKRMKPYLPHANPEFTVPHGGGRPDFAESAQVRKVLQ 368
>gi|218197268|gb|EEC79695.1| hypothetical protein OsI_20981 [Oryza sativa Indica Group]
Length = 712
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 162/338 (47%), Positives = 220/338 (65%), Gaps = 9/338 (2%)
Query: 25 ILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKV------HSFSK 78
+ CRVV++ L+A+ TDEVYAQ++L+PE + D D K H F K
Sbjct: 85 VFCRVVDVTLLADAATDEVYAQLSLVPEKEEVARRADDGEGEDGDGMKQRFARMPHMFCK 144
Query: 79 VLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRR 138
LTASDTSTHGGFSV R+ A +C PPLD +Q P+QELVAKDLHG EWRF+HI+RGQPRR
Sbjct: 145 TLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWRFRHIYRGQPRR 204
Query: 139 HLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGV 198
HLLTTGWS FV K+LV+GD +FLRG++GEL +GVR A+ ++ + +Q +LG
Sbjct: 205 HLLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGVRRAAQLKNGSAFPALYNQCSNLGT 264
Query: 199 LATASHAVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPER 256
LA +HAVAT+++F +YY PR SQ FI+ K++++++ F+VG+R+KMR+E ED+ ER
Sbjct: 265 LANVAHAVATESVFNIYYNPRLSQSEFIVPYWKFMKSLSQPFSVGLRFKMRYESEDASER 324
Query: 257 RFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 316
R++G + G D P W SKW+ L V+WD+ A RP+RVSPWEIE + + +L P
Sbjct: 325 RYTGIITGSGDTDPMWHGSKWKCLLVRWDDDAEFRRPNRVSPWEIELTSSVSGSHLSTP- 383
Query: 317 LAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQ 354
+K +P L P +P P A AQ H + Q
Sbjct: 384 HSKRLKPCLPHVNPEYMVPRGGGCPDFAESAQFHKVLQ 421
>gi|168004026|ref|XP_001754713.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694334|gb|EDQ80683.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 398
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 161/292 (55%), Positives = 202/292 (69%), Gaps = 4/292 (1%)
Query: 21 LPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVL 80
LP+ +LC++ I L A+ TDEV+AQ+ L P+ P + + V SF K L
Sbjct: 52 LPAHLLCKISKIELQADPHTDEVFAQMDLTPQYETEFTKEMKDAPPPTMQKNVRSFCKTL 111
Query: 81 TASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHL 140
TASDTSTHGGFSV R+ A +CLP LD + + P QELVAKDLHG EW F+HI+RG PRRHL
Sbjct: 112 TASDTSTHGGFSVPRRAAEDCLPLLDHSMNPPCQELVAKDLHGKEWNFRHIYRGHPRRHL 171
Query: 141 LTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLA 200
LTTGWS FV+ KRLVAGDT +FLRGENG+L VGVR ++Q S+ S+ ++HLGVLA
Sbjct: 172 LTTGWSVFVSQKRLVAGDTVIFLRGENGQLRVGVRRASKQLPQTRSTHFSNANLHLGVLA 231
Query: 201 TASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRF 258
ASHA + F V Y PRT S+F+I +KYL+ N VG R+KM+FE ++S ERR+
Sbjct: 232 AASHAATERLRFSVIYNPRTSPSEFVIPYHKYLKTKENNLTVGSRFKMKFESDESTERRY 291
Query: 259 SGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASAT 309
SGT+V V D P W +S WRS+KV+WDE AS R +RVSPWEIEPFV +T
Sbjct: 292 SGTIVEVSDADPLKWPNSAWRSMKVEWDESAS-ERHERVSPWEIEPFVPIST 342
>gi|356503887|ref|XP_003520732.1| PREDICTED: auxin response factor 7-like, partial [Glycine max]
Length = 1043
Score = 318 bits (814), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 169/335 (50%), Positives = 225/335 (67%), Gaps = 18/335 (5%)
Query: 1 MEQLEASTNQELNQ--RIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQN-- 56
+EQ+ A T + + IP++ LPSKILC+++N+ L AE +DEVYAQ+TL+PE ++
Sbjct: 441 LEQVAAYTQNQPDSHLEIPVYDLPSKILCKIMNVELKAEAYSDEVYAQVTLVPEVQKDNL 500
Query: 57 ---EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPT 113
E D P+ R +SFSK+LT SDTSTHGGFSV +K+A EC PPLDM TP
Sbjct: 501 CFEEEVNIDQIPS---RNAAYSFSKILTPSDTSTHGGFSVPKKYADECFPPLDMTLQTPA 557
Query: 114 QELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVG 173
QE+VAKDL+G+EWRF+HI+RGQP+RHLLT+GWS FV +K+LVAGD+ +F+RGE+GEL VG
Sbjct: 558 QEIVAKDLNGFEWRFRHIYRGQPKRHLLTSGWSLFVNAKKLVAGDSCIFVRGESGELRVG 617
Query: 174 VRCLARQQS--SMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNK 229
+R A S S SS+IS SM LG+L AS+AV +TMF+VYY+P T+ +FI+ L
Sbjct: 618 IRRAAENLSNISQSSSLISGHSMQLGILTNASNAVGNRTMFLVYYRPWTNPFEFIVHLQT 677
Query: 230 YLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPA 288
YL++ + +G R +M+ E E+S RR +GT++G ED S W S WR LKVQWD
Sbjct: 678 YLKSTLQDYPIGTRVQMQHEVEES-LRRLAGTIIGNEDIDSIRWPGSAWRRLKVQWDAIV 736
Query: 289 -SITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 322
P+RV PW IEP + SA P L K+
Sbjct: 737 EDKMHPERVCPWWIEP-LESAKEKKQVPALPTKKK 770
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Query: 515 VSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT 574
V+P ++ K C+ +NRS TKV G A+GRA+DL GY LI EL+ MFD +G L +
Sbjct: 950 VAPGKTCKKCRCV-NNRSCTKVLKLGNALGRAVDLARFNGYTELIAELDSMFDFQGTLIS 1008
Query: 575 -RTKWEIVYTDDEGDMMLVGDDPWH 598
+ W + DDEGDMM +GD PW
Sbjct: 1009 GGSGWHVTCLDDEGDMMQLGDYPWQ 1033
>gi|449524944|ref|XP_004169481.1| PREDICTED: auxin response factor 4-like isoform 1 [Cucumis sativus]
Length = 802
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 164/340 (48%), Positives = 214/340 (62%), Gaps = 41/340 (12%)
Query: 19 FRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEP------------------------S 54
F L ILCRV+N+HL+A +E DEVY Q+TL P P S
Sbjct: 98 FDLQPHILCRVINVHLLANKENDEVYTQLTLRPLPELLGTGVAGKELEELALNGADGDGS 157
Query: 55 QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQ 114
PT P H F K LTASDTSTHGGFSV R+ A +C PPLD Q P+Q
Sbjct: 158 GGSPTRSTP----------HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYTQLRPSQ 207
Query: 115 ELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGV 174
EL+AKDLHG EWRF+HI+RGQPRRHLLTTGWS FV+ K L++GD +FLRGENGEL +G+
Sbjct: 208 ELIAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLISGDAVLFLRGENGELRLGI 267
Query: 175 RCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLE 232
R R ++ +P S++ +Q+ LA A++T++ F V+Y PR +QFIIS KY++
Sbjct: 268 RRAVRPRNGLPDSIVGNQNSCANDLARVVKAISTKSTFDVFYNPRAYHAQFIISCQKYVK 327
Query: 233 AVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASIT 291
++NN +VG R+KMRFE +DSPERRF+G VVG+ D S W +SKWR L V+WD+ +
Sbjct: 328 SINNPVSVGTRFKMRFEMDDSPERRFNGVVVGISDMDSFRWPNSKWRCLTVRWDKDSD-- 385
Query: 292 RPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPP 331
+RVSPWEI+P V + P L + K+ R S++ P
Sbjct: 386 HQERVSPWEIDPSV--SLPPLSVQSSPRLKKLRTSLQAAP 423
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 66/95 (69%), Gaps = 1/95 (1%)
Query: 528 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDE 586
+ RS TKV QG VGRA+DL+ L GY LI ELE +F ++G L K W ++YTD+E
Sbjct: 671 SGKRSCTKVHKQGSLVGRAIDLSRLNGYTDLISELERLFSMEGLLKDPDKGWRVLYTDNE 730
Query: 587 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPG 621
D+M+VGD PWH+FC+ V +I I + ++V+KM+ G
Sbjct: 731 NDVMVVGDYPWHDFCDAVSKIHIYTQEEVEKMTNG 765
>gi|356544621|ref|XP_003540747.1| PREDICTED: auxin response factor 4-like [Glycine max]
Length = 791
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 154/303 (50%), Positives = 204/303 (67%), Gaps = 15/303 (4%)
Query: 16 IPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQN----------EPTTPDPCP 65
IP + L +I CRVVN+ L+A +E DEVY Q+TLLP+P E +
Sbjct: 95 IPTYDLQPQIFCRVVNVQLLANKENDEVYTQVTLLPQPELEGMYSEGKELEELGAEEDGD 154
Query: 66 ADSP-RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGY 124
SP + H F K LTASDTSTHGGFSV R+ A +C PPLD Q P+QELVAKDLHG
Sbjct: 155 ERSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGV 214
Query: 125 EWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSM 184
EW+F+HI+RGQPRRHLLTTGWS FV+ K LV+GD +FLRGENGEL +G+R R ++ +
Sbjct: 215 EWKFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGENGELRLGIRRAVRPRNDL 274
Query: 185 PSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGM 242
P SVI SQ+ + VL++ ++A++T++ F V+Y PR S F++ KY++++ N ++G
Sbjct: 275 PESVIGSQNCYSNVLSSVANAISTKSKFHVFYSPRASHADFVVPYQKYVKSIKNPVSIGT 334
Query: 243 RYKMRFEGEDSPERRF-SGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWE 300
R+KMRFE ++S ERR SGT++ D P+ W SKWR L V+WDE DRVSPWE
Sbjct: 335 RFKMRFEMDESQERRCSSGTLIATSDLDPYRWAKSKWRCLMVRWDEDIETNHQDRVSPWE 394
Query: 301 IEP 303
I+P
Sbjct: 395 IDP 397
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 90/158 (56%), Gaps = 16/158 (10%)
Query: 473 KVPVSSLTTEGHIISTISAAADS--------DGKSDIAKEFKEKKQEQVQVSPKESQSKQ 524
+V S L E + IS+AA+ GK + K F + ++ +K+
Sbjct: 604 EVGRSDLPNEHKLQDNISSAANMGVSNDNNVQGKVNACKLFGFSLSGETTAQNLQNSAKR 663
Query: 525 SCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYT 583
SC TKV QG VGRA+DL+ L GY+ L+ ELE +F ++G L K W I+YT
Sbjct: 664 SC-------TKVHKQGSLVGRAIDLSRLSGYNDLLSELERLFSMEGLLKDPDKGWRILYT 716
Query: 584 DDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPG 621
D E D+M+VGDDPWHEFC++V +I I + ++V+KM+ G
Sbjct: 717 DSENDIMVVGDDPWHEFCDVVSKIHIYTQEEVEKMTIG 754
>gi|356543436|ref|XP_003540166.1| PREDICTED: auxin response factor 4-like [Glycine max]
Length = 793
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 162/341 (47%), Positives = 213/341 (62%), Gaps = 37/341 (10%)
Query: 16 IPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLP---------------------EPS 54
+P + L +I CRVVNI L+A +E DEVY Q+TLLP E +
Sbjct: 91 MPTYDLQPQIFCRVVNIQLLANKENDEVYTQVTLLPQAELAGMYMEGKELEKLGADEEGN 150
Query: 55 QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQ 114
+ PT P H F K LTASDTSTHGGFSV R+ A +C PPLD + P+Q
Sbjct: 151 ETTPTKSTP----------HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKKQRPSQ 200
Query: 115 ELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGV 174
ELVAKDLHG EW+F+HI+RGQPRRHLLTTGWS FV+ K LV+GD +FLRGENGEL +G+
Sbjct: 201 ELVAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGENGELRLGI 260
Query: 175 RCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQ--FIISLNKYLE 232
R AR ++ +P S++ SQS + L++ ++A++ ++MF V+Y PR S F + KY++
Sbjct: 261 RRAARPRNGLPESIVGSQSYYPNFLSSVANAISAKSMFHVFYSPRASHADFAVPYQKYIK 320
Query: 233 AVNNKFAVGMRYKMRFEGEDSPERRF-SGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASI 290
++ N +G R+KM+FE ++SPERR SG V G+ D P+ W SKWR L V+WDE I
Sbjct: 321 SIKNPVTIGTRFKMKFEMDESPERRCTSGIVTGMSDLDPYKWPKSKWRCLMVRWDEDIEI 380
Query: 291 TRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPRLSMEVP 330
DRVSPWE++P AS P +Q K RP L P
Sbjct: 381 NHQDRVSPWEVDP-SASLPPLSIQSSRRLKKLRPGLLAAAP 420
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 77/126 (61%), Gaps = 8/126 (6%)
Query: 497 GKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYD 556
GK + K F + ++ SK+SC TKV QG VGRA+DL+ L Y+
Sbjct: 637 GKVNACKLFGFPLSRETTAQNLQNSSKRSC-------TKVHKQGSLVGRAIDLSRLSSYN 689
Query: 557 HLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDV 615
L+ ELE +F ++G L K W I+YTD E D+M+VGDDPWHEFC++V +I I + ++V
Sbjct: 690 DLLIELERLFSMEGLLIDPNKGWRILYTDSENDIMVVGDDPWHEFCDVVSKIHIHTQEEV 749
Query: 616 KKMSPG 621
+KM+ G
Sbjct: 750 EKMTIG 755
>gi|449463651|ref|XP_004149545.1| PREDICTED: auxin response factor 4-like [Cucumis sativus]
gi|449524946|ref|XP_004169482.1| PREDICTED: auxin response factor 4-like isoform 2 [Cucumis sativus]
Length = 733
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 164/340 (48%), Positives = 214/340 (62%), Gaps = 41/340 (12%)
Query: 19 FRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEP------------------------S 54
F L ILCRV+N+HL+A +E DEVY Q+TL P P S
Sbjct: 98 FDLQPHILCRVINVHLLANKENDEVYTQLTLRPLPELLGTGVAGKELEELALNGADGDGS 157
Query: 55 QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQ 114
PT P H F K LTASDTSTHGGFSV R+ A +C PPLD Q P+Q
Sbjct: 158 GGSPTRSTP----------HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYTQLRPSQ 207
Query: 115 ELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGV 174
EL+AKDLHG EWRF+HI+RGQPRRHLLTTGWS FV+ K L++GD +FLRGENGEL +G+
Sbjct: 208 ELIAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLISGDAVLFLRGENGELRLGI 267
Query: 175 RCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLE 232
R R ++ +P S++ +Q+ LA A++T++ F V+Y PR +QFIIS KY++
Sbjct: 268 RRAVRPRNGLPDSIVGNQNSCANDLARVVKAISTKSTFDVFYNPRAYHAQFIISCQKYVK 327
Query: 233 AVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASIT 291
++NN +VG R+KMRFE +DSPERRF+G VVG+ D S W +SKWR L V+WD+ +
Sbjct: 328 SINNPVSVGTRFKMRFEMDDSPERRFNGVVVGISDMDSFRWPNSKWRCLTVRWDKDSD-- 385
Query: 292 RPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPP 331
+RVSPWEI+P V + P L + K+ R S++ P
Sbjct: 386 HQERVSPWEIDPSV--SLPPLSVQSSPRLKKLRTSLQAAP 423
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 66/95 (69%), Gaps = 1/95 (1%)
Query: 528 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDE 586
+ RS TKV QG VGRA+DL+ L GY LI ELE +F ++G L K W ++YTD+E
Sbjct: 602 SGKRSCTKVHKQGSLVGRAIDLSRLNGYTDLISELERLFSMEGLLKDPDKGWRVLYTDNE 661
Query: 587 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPG 621
D+M+VGD PWH+FC+ V +I I + ++V+KM+ G
Sbjct: 662 NDVMVVGDYPWHDFCDAVSKIHIYTQEEVEKMTNG 696
>gi|50511471|gb|AAT77393.1| putative ETTIN protein [Oryza sativa Japonica Group]
Length = 719
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 161/338 (47%), Positives = 219/338 (64%), Gaps = 9/338 (2%)
Query: 25 ILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKV------HSFSK 78
+ CRVV++ L+A+ TDEVYAQ++L+PE + D D K H F K
Sbjct: 85 VFCRVVDVTLLADAATDEVYAQLSLVPEKEEVARRADDGEGEDGDGMKQRFARMPHMFCK 144
Query: 79 VLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRR 138
LTASDTSTHGGFSV R+ A +C PPLD +Q P+QELVAKDLH EWRF+HI+RGQPRR
Sbjct: 145 TLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHSTEWRFRHIYRGQPRR 204
Query: 139 HLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGV 198
HLLTTGWS FV K+LV+GD +FLRG++GEL +GVR A+ ++ + +Q +LG
Sbjct: 205 HLLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGVRRAAQLKNGSAFPALYNQCSNLGT 264
Query: 199 LATASHAVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPER 256
LA +HAVAT+++F +YY PR SQ FI+ K++++++ F+VG+R+KMR+E ED+ ER
Sbjct: 265 LANVAHAVATESVFNIYYNPRLSQSEFIVPYWKFMKSLSQPFSVGLRFKMRYESEDATER 324
Query: 257 RFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 316
R++G + G D P W SKW+ L V+WD+ A RP+RVSPWEIE + + +L P
Sbjct: 325 RYTGIITGSGDTDPMWHGSKWKCLLVRWDDDAEFRRPNRVSPWEIELTSSVSGSHLSTP- 383
Query: 317 LAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQ 354
+K +P L P +P P A AQ H + Q
Sbjct: 384 HSKRLKPCLPHVNPEYMVPRGGGCPDFAESAQFHKVLQ 421
>gi|47496700|dbj|BAD19065.1| auxin response factor 5 [Cucumis sativus]
Length = 733
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 163/340 (47%), Positives = 214/340 (62%), Gaps = 41/340 (12%)
Query: 19 FRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEP------------------------S 54
F L ILCRV+N+HL+A +E DEVY Q+TL P P S
Sbjct: 98 FDLQPHILCRVINVHLLANKENDEVYTQLTLRPLPELLGTGVAGKELEELALNGADGDGS 157
Query: 55 QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQ 114
PT P H F K LTASDTSTHGGFSV R+ A +C PPLD Q P+Q
Sbjct: 158 GGSPTKSTP----------HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYTQLRPSQ 207
Query: 115 ELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGV 174
EL+AKDLHG EWRF+HI+RGQPRRHLLTTGWS FV+ K L++GD +FLRGENGEL +G+
Sbjct: 208 ELIAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLISGDAVLFLRGENGELRLGI 267
Query: 175 RCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLE 232
R R ++ +P S++ +Q+ LA A++T++ F V+Y PR +QFIIS KY++
Sbjct: 268 RRAVRPRNGLPDSIVGNQNSCANDLARVVKAISTKSTFDVFYNPRAYHAQFIISCQKYVK 327
Query: 233 AVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASIT 291
++NN +VG R+KMRFE +DSPER+F+G VVG+ D S W +SKWR L V+WD+ +
Sbjct: 328 SINNPVSVGTRFKMRFEMDDSPERKFNGVVVGISDMDSFRWPNSKWRCLTVRWDKDSD-- 385
Query: 292 RPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPP 331
+RVSPWEI+P V + P L + K+ R S++ P
Sbjct: 386 HQERVSPWEIDPSV--SLPPLSVQSSPRLKKLRTSLQAAP 423
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 66/95 (69%), Gaps = 1/95 (1%)
Query: 528 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDE 586
+ RS TKV QG VGRA+DL+ L GY LI ELE +F ++G L K W ++YTD+E
Sbjct: 602 SGKRSCTKVHKQGSLVGRAIDLSRLNGYTDLISELERLFSMEGLLKDPDKGWRVLYTDNE 661
Query: 587 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPG 621
D+M+VGD PWH+FC+ V +I I + ++V+KM+ G
Sbjct: 662 NDVMVVGDYPWHDFCDAVSKIHIYTQEEVEKMTNG 696
>gi|238478721|ref|NP_001154393.1| auxin response factor 13 [Arabidopsis thaliana]
gi|332193560|gb|AEE31681.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 546
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 187/498 (37%), Positives = 264/498 (53%), Gaps = 84/498 (16%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
+E +E ST EL+ P+F LPSK+ CRVV I ++ TDEVYAQI+L+P+ ++
Sbjct: 52 IELIENSTRDELDHIRPIFDLPSKLRCRVVAIDRKVDKNTDEVYAQISLMPDTTE---VM 108
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
D+ RP V+ FSK+LTASD S GG + +++A EC PPLDM+Q TQ LVAKD
Sbjct: 109 THNTTMDTRRPIVYFFSKILTASDVSLSGGLIIPKQYAIECFPPLDMSQPISTQNLVAKD 168
Query: 121 LHGYEWRFKHIFRGQPRRHLLTT--GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
L+G EW FKH+FRG P+RH+ T+ GWS F T+KRL+ GD FV LRGENGEL G+R
Sbjct: 169 LYGQEWSFKHVFRGTPQRHMFTSGGGWSVFATTKRLIVGDIFVLLRGENGELRFGIRRAK 228
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKF 238
QQ +PSSVIS+ M GV+A+ +A T+ MF V YKPR
Sbjct: 229 HQQGHIPSSVISANCMQHGVIASVVNAFKTKCMFNVVYKPR------------------- 269
Query: 239 AVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSP 298
M+FEG+D E+R+ GT++GV D SPHWKDS+WRSLKVQWDE + RP++VSP
Sbjct: 270 -------MQFEGKDFSEKRYDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVSP 322
Query: 299 WEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVT 358
W+IE + S+ ++ Q L K K
Sbjct: 323 WDIEHLIPSS--DISQSSLKKKKH------------------------------------ 344
Query: 359 AEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISA 418
W + ++ SN + + + SP + + + AI+D+K +S
Sbjct: 345 -----------WLQLNEIGATLSNLWTCQEIGQRSMNSP-ISVPEFSYPNAIEDSKFLSG 392
Query: 419 WPA-HSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELIN-HATSSAPSEKVPV 476
HS + P+ + N+D +++ + TE TSC LFG++L H A S V +
Sbjct: 393 LLLNHSLLAIPNENY-NSDQMIQPRKEDITTEATTSCLLFGVDLTKVHMQGVAISRAVDL 451
Query: 477 SSLTTEGHIISTISAAAD 494
+++ +I + D
Sbjct: 452 TAMHGYNQLIQKLEELFD 469
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 60/105 (57%), Positives = 79/105 (75%)
Query: 520 SQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWE 579
+++ SCL TKV MQGVA+ RA+DLT + GY+ LI +LEE+FD+K +L TR +WE
Sbjct: 422 TEATTSCLLFGVDLTKVHMQGVAISRAVDLTAMHGYNQLIQKLEELFDLKDELRTRNQWE 481
Query: 580 IVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 624
IV+T++EG MLVGDDPW EFCNM KRIFICS +++KKM +K
Sbjct: 482 IVFTNNEGAEMLVGDDPWPEFCNMAKRIFICSKEEIKKMKLKNKF 526
>gi|296278602|gb|ADH04265.1| ARF1 [Nicotiana benthamiana]
Length = 889
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 170/332 (51%), Positives = 227/332 (68%), Gaps = 15/332 (4%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ ASTN+E++ IP + LP +++C++ N+ + A+ ETDEVYAQ+TL P +Q +
Sbjct: 53 EQVAASTNKEVDAHIPNYPGLPPQLICQLHNLTMHADVETDEVYAQMTLQPLSAQEQK-- 110
Query: 61 PDPC--PADSPRPK---VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQE 115
D C PA+ P + F K LTASDTSTHGGFSV R+ A + PPLD +Q P QE
Sbjct: 111 -DVCLLPAELGIPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPCQE 169
Query: 116 LVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR 175
L+AKDLHG EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD +F+ EN +L +G+R
Sbjct: 170 LIAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDAVIFIWNENNQLLLGIR 229
Query: 176 CLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEA 233
R Q+ MPSSV+SS SMH+G+LA A+HA AT + F ++Y PR S+F+I L KY +A
Sbjct: 230 RANRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYAKA 289
Query: 234 V-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASIT 291
V + + +VGMR++M FE E+S RR+ GT+ G+ D P W +S WRS+KV WDE +
Sbjct: 290 VYHTRISVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGE 349
Query: 292 RPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 323
R RVS WEIEP + P P + KRP
Sbjct: 350 RQPRVSLWEIEPL--TTFPMYPSPFSLRLKRP 379
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 59/100 (59%), Gaps = 4/100 (4%)
Query: 529 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 586
+NR+ KV G + GR+LD++ Y L EL MF ++G L R+ W++V+ D E
Sbjct: 753 TNRTFVKVHKSG-SFGRSLDISKFSNYHELRSELAHMFGLEGLLEDPERSGWQLVFVDRE 811
Query: 587 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP-GSKLP 625
D++L+GDDPW EF N V I I S +V++M G LP
Sbjct: 812 NDVLLLGDDPWQEFVNNVWYIKILSPLEVQQMGKDGLDLP 851
>gi|297724319|ref|NP_001174523.1| Os05g0563400 [Oryza sativa Japonica Group]
gi|75160561|sp|Q8S985.1|ARFO_ORYSJ RecName: Full=Auxin response factor 15; AltName: Full=ETTIN-like
protein 1; AltName: Full=OsETTIN1
gi|19352033|dbj|BAB85910.1| Arabidopsis ETTIN-like protein 1 [Oryza sativa]
gi|222632562|gb|EEE64694.1| hypothetical protein OsJ_19549 [Oryza sativa Japonica Group]
gi|255676573|dbj|BAH93251.1| Os05g0563400 [Oryza sativa Japonica Group]
Length = 712
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 161/338 (47%), Positives = 219/338 (64%), Gaps = 9/338 (2%)
Query: 25 ILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKV------HSFSK 78
+ CRVV++ L+A+ TDEVYAQ++L+PE + D D K H F K
Sbjct: 85 VFCRVVDVTLLADAATDEVYAQLSLVPEKEEVARRADDGEGEDGDGMKQRFARMPHMFCK 144
Query: 79 VLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRR 138
LTASDTSTHGGFSV R+ A +C PPLD +Q P+QELVAKDLH EWRF+HI+RGQPRR
Sbjct: 145 TLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHSTEWRFRHIYRGQPRR 204
Query: 139 HLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGV 198
HLLTTGWS FV K+LV+GD +FLRG++GEL +GVR A+ ++ + +Q +LG
Sbjct: 205 HLLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGVRRAAQLKNGSAFPALYNQCSNLGT 264
Query: 199 LATASHAVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPER 256
LA +HAVAT+++F +YY PR SQ FI+ K++++++ F+VG+R+KMR+E ED+ ER
Sbjct: 265 LANVAHAVATESVFNIYYNPRLSQSEFIVPYWKFMKSLSQPFSVGLRFKMRYESEDATER 324
Query: 257 RFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 316
R++G + G D P W SKW+ L V+WD+ A RP+RVSPWEIE + + +L P
Sbjct: 325 RYTGIITGSGDTDPMWHGSKWKCLLVRWDDDAEFRRPNRVSPWEIELTSSVSGSHLSTP- 383
Query: 317 LAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQ 354
+K +P L P +P P A AQ H + Q
Sbjct: 384 HSKRLKPCLPHVNPEYMVPRGGGCPDFAESAQFHKVLQ 421
>gi|161579976|gb|ABN10955.2| auxin response factor 8 [Ipomoea nil]
Length = 838
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 164/313 (52%), Positives = 220/313 (70%), Gaps = 13/313 (4%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ ASTN+E++ IP + LP++++C++ N+ + A+ ETDEVYAQ+TL P +Q +
Sbjct: 53 EQVTASTNKEIDAHIPSYPGLPAQLICQLHNVTMHADNETDEVYAQMTLQPLSAQEQK-- 110
Query: 61 PDPC--PADSPRPK---VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQE 115
D C PA+ P + F K LTASDTSTHGGFSV R+ A + PPLD +Q P QE
Sbjct: 111 -DVCLLPAELGMPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQE 169
Query: 116 LVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR 175
L+AKDLHG EW+F+H+FRGQP+RHLLTTGWS FV++KRLVAGD +F+ EN +L +G+R
Sbjct: 170 LIAKDLHGNEWKFRHVFRGQPKRHLLTTGWSVFVSAKRLVAGDAVIFIWNENNQLLLGIR 229
Query: 176 CLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEA 233
R Q+ MPSSV+SS SMH+G+LA A+HA AT + F ++Y PR S F+I L KY +A
Sbjct: 230 RANRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSDFVIPLAKYAKA 289
Query: 234 V-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASIT 291
V + + +VGMR++M FE E+S RR+ GT+ G+ D P W +S WRS+KV WDE +
Sbjct: 290 VYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGE 349
Query: 292 RPDRVSPWEIEPF 304
R RVS WEIEP
Sbjct: 350 RQPRVSLWEIEPL 362
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 72/134 (53%), Gaps = 4/134 (2%)
Query: 488 TISAAADSDGKSDIAKEFKEKKQEQVQVSPK-ESQSKQSCLTSNRSRTKVQMQGVAVGRA 546
T S AD A F+ VQ S + S + Q ++ R+ KV G VGR+
Sbjct: 668 TTSVVADVSSLPSGASGFQNSPYGYVQDSSELVSSAGQVDPSTPRTFIKVYKSGY-VGRS 726
Query: 547 LDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEFCNMV 604
LD+T + Y L EL +MF I+G L R+ W++V+ D E D++L+GDDPW F N V
Sbjct: 727 LDITRISSYHELRQELAQMFGIEGLLEDPQRSGWQLVFVDRENDVLLLGDDPWEAFVNNV 786
Query: 605 KRIFICSSQDVKKM 618
I I S +DV+K+
Sbjct: 787 WYIKILSPEDVQKL 800
>gi|115469522|ref|NP_001058360.1| Os06g0677800 [Oryza sativa Japonica Group]
gi|75253264|sp|Q653U3.1|ARFQ_ORYSJ RecName: Full=Auxin response factor 17
gi|52076626|dbj|BAD45527.1| putative auxin response factor [Oryza sativa Japonica Group]
gi|52076912|dbj|BAD45924.1| putative auxin response factor [Oryza sativa Japonica Group]
gi|113596400|dbj|BAF20274.1| Os06g0677800 [Oryza sativa Japonica Group]
Length = 917
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 165/329 (50%), Positives = 228/329 (69%), Gaps = 10/329 (3%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQ--NEP 58
EQ+ ASTN+E+ +IP + LP +++C++ N+ + A+ ETDEVYAQ+TL P Q +P
Sbjct: 58 EQVAASTNKEMESQIPNYPNLPPQLICQLHNVTMHADAETDEVYAQMTLQPLSPQELKDP 117
Query: 59 TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
P + + +P + F K LTASDTSTHGGFSV R+ A + PPLD Q P QEL+A
Sbjct: 118 YLPAELGSANKQPTNY-FCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELIA 176
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
KDLHG EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ +N +L +G+R
Sbjct: 177 KDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRRAN 236
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-N 235
R Q+ MPSSV+SS SMH+G+LA A+HA +T + F ++Y PR S+F+I L+KY++AV +
Sbjct: 237 RPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFTIFYNPRASPSEFVIPLSKYVKAVYH 296
Query: 236 NKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPD 294
+ +VGMR++M FE E+S RR+ GT+ G+ D + W +S WRS+KV WDE + R
Sbjct: 297 TRISVGMRFRMLFETEESSVRRYMGTITGISDLDAARWPNSHWRSVKVGWDESTAGERQP 356
Query: 295 RVSPWEIEPFVASATPNLVQPVLAKNKRP 323
RVS WEIEP + P P + KRP
Sbjct: 357 RVSLWEIEPL--TTFPMYPSPFPLRLKRP 383
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 544 GRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGDMMLVGDDPWHEFC 601
GR+LD+T Y L EL +F ++GQL R+ W++V+ D E D++LVGDDPW EF
Sbjct: 798 GRSLDITRFSSYHELRRELGRLFGLEGQLENPLRSGWQLVFVDREDDVLLVGDDPWQEFV 857
Query: 602 NMVKRIFICSSQDVKKM 618
N V I I S Q+V++M
Sbjct: 858 NSVSCIKILSPQEVQQM 874
>gi|158512939|sp|A2YG67.1|ARFQ_ORYSI RecName: Full=Auxin response factor 17
gi|125556472|gb|EAZ02078.1| hypothetical protein OsI_24158 [Oryza sativa Indica Group]
Length = 917
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 165/329 (50%), Positives = 228/329 (69%), Gaps = 10/329 (3%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQ--NEP 58
EQ+ ASTN+E+ +IP + LP +++C++ N+ + A+ ETDEVYAQ+TL P Q +P
Sbjct: 58 EQVAASTNKEMESQIPNYPNLPPQLICQLHNVTMHADAETDEVYAQMTLQPLSPQELKDP 117
Query: 59 TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
P + + +P + F K LTASDTSTHGGFSV R+ A + PPLD Q P QEL+A
Sbjct: 118 YLPAELGSANKQP-TNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELIA 176
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
KDLHG EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ +N +L +G+R
Sbjct: 177 KDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRRAN 236
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-N 235
R Q+ MPSSV+SS SMH+G+LA A+HA +T + F ++Y PR S+F+I L+KY++AV +
Sbjct: 237 RPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFTIFYNPRASPSEFVIPLSKYVKAVYH 296
Query: 236 NKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPD 294
+ +VGMR++M FE E+S RR+ GT+ G+ D + W +S WRS+KV WDE + R
Sbjct: 297 TRISVGMRFRMLFETEESSVRRYMGTITGISDLDAARWPNSHWRSVKVGWDESTAGERQP 356
Query: 295 RVSPWEIEPFVASATPNLVQPVLAKNKRP 323
RVS WEIEP + P P + KRP
Sbjct: 357 RVSLWEIEPL--TTFPMYPSPFPLRLKRP 383
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 544 GRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGDMMLVGDDPWHEFC 601
GR+LD+T Y L EL +F ++GQL R+ W++V+ D E D++LVGDDPW EF
Sbjct: 798 GRSLDITRFSSYHELRRELGRLFGLEGQLENPLRSGWQLVFVDREDDVLLVGDDPWQEFV 857
Query: 602 NMVKRIFICSSQDVKKM 618
N V I I S Q+V++M
Sbjct: 858 NSVSCIKILSPQEVQQM 874
>gi|242060620|ref|XP_002451599.1| hypothetical protein SORBIDRAFT_04g004430 [Sorghum bicolor]
gi|241931430|gb|EES04575.1| hypothetical protein SORBIDRAFT_04g004430 [Sorghum bicolor]
Length = 911
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 165/329 (50%), Positives = 225/329 (68%), Gaps = 10/329 (3%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQ--NEP 58
EQ+ ASTN+E+ +IP + LP +++C++ N+ + A+ ETDEVYAQ+TL P Q +P
Sbjct: 58 EQVAASTNKEMEAQIPNYPSLPPQLICQLHNVTMHADAETDEVYAQMTLQPLSPQELKDP 117
Query: 59 TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
P S +P + F K LTASDTSTHGGFSV R+ A + PPLD NQ P QEL+A
Sbjct: 118 FLPAELGTASKQPTNY-FCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFNQQPPAQELIA 176
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
DLHG EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ +N +L +G+R
Sbjct: 177 TDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRRAN 236
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAV-N 235
R Q+ MPSSV+SS SMH+G+LA A+HA +T + F ++Y PR S +F+I + KY++AV +
Sbjct: 237 RPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFTIFYNPRASPCEFVIPMAKYVKAVYH 296
Query: 236 NKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPD 294
+ +VGMR++M FE E+S RR+ GT+ G+ D P W +S WRS+KV WDE + +
Sbjct: 297 TRISVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGEKQP 356
Query: 295 RVSPWEIEPFVASATPNLVQPVLAKNKRP 323
RVS WEIEP + P P KRP
Sbjct: 357 RVSLWEIEPL--TTFPMYPSPFALGLKRP 383
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 55/85 (64%), Gaps = 3/85 (3%)
Query: 543 VGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEF 600
VGR LD+T YD L E+ +F ++GQL R+ W++V+ D E D++LVGDDPW EF
Sbjct: 790 VGRLLDITRFSSYDELRSEVGRLFGLEGQLEDPLRSGWQLVFVDREDDVLLVGDDPWQEF 849
Query: 601 CNMVKRIFICSSQDVKKMS-PGSKL 624
N V I I S ++V++M PG +L
Sbjct: 850 VNSVSCIKILSPEEVQQMGKPGIQL 874
>gi|125598233|gb|EAZ38013.1| hypothetical protein OsJ_22358 [Oryza sativa Japonica Group]
Length = 904
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 165/329 (50%), Positives = 228/329 (69%), Gaps = 10/329 (3%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQ--NEP 58
EQ+ ASTN+E+ +IP + LP +++C++ N+ + A+ ETDEVYAQ+TL P Q +P
Sbjct: 58 EQVAASTNKEMESQIPNYPNLPPQLICQLHNVTMHADAETDEVYAQMTLQPLSPQELKDP 117
Query: 59 TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
P + + +P + F K LTASDTSTHGGFSV R+ A + PPLD Q P QEL+A
Sbjct: 118 YLPAELGSANKQPTNY-FCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELIA 176
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
KDLHG EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ +N +L +G+R
Sbjct: 177 KDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRRAN 236
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-N 235
R Q+ MPSSV+SS SMH+G+LA A+HA +T + F ++Y PR S+F+I L+KY++AV +
Sbjct: 237 RPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFTIFYNPRASPSEFVIPLSKYVKAVYH 296
Query: 236 NKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPD 294
+ +VGMR++M FE E+S RR+ GT+ G+ D + W +S WRS+KV WDE + R
Sbjct: 297 TRISVGMRFRMLFETEESSVRRYMGTITGISDLDAARWPNSHWRSVKVGWDESTAGERQP 356
Query: 295 RVSPWEIEPFVASATPNLVQPVLAKNKRP 323
RVS WEIEP + P P + KRP
Sbjct: 357 RVSLWEIEPL--TTFPMYPSPFPLRLKRP 383
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Query: 559 IDELEEMFDIKGQLHT--RTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVK 616
++EL +F ++GQL R+ W++V+ D E D++LVGDDPW EF N V I I S Q+V+
Sbjct: 800 MEELGRLFGLEGQLENPLRSGWQLVFVDREDDVLLVGDDPWQEFVNSVSCIKILSPQEVQ 859
Query: 617 KM 618
+M
Sbjct: 860 QM 861
>gi|224056403|ref|XP_002298839.1| predicted protein [Populus trichocarpa]
gi|222846097|gb|EEE83644.1| predicted protein [Populus trichocarpa]
Length = 884
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 166/328 (50%), Positives = 224/328 (68%), Gaps = 8/328 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ ASTN+E+N +IP + LP++++C++ N+ + A+ ETDEVYAQ+TL P Q +
Sbjct: 51 EQVAASTNKEVNAQIPSYPSLPAQLICQLHNVTMHADVETDEVYAQMTLQPLSPQEQKAA 110
Query: 61 PDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
P +P + + F K LTASDTSTHGGFSV R+ A + PPLD +Q P QEL+A+
Sbjct: 111 YLPADMGTPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQHPPAQELIAR 170
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ E +L +G+R R
Sbjct: 171 DLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATR 230
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NN 236
Q+ MPSSV+SS SMHLG+LA A+HA AT + F ++Y PR S+F+I L KYL+AV
Sbjct: 231 PQTVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYLKAVYYT 290
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFS-PHWKDSKWRSLKVQWDEPASITRPDR 295
+ +VGMR++M FE E+S RR+ GT+ G+ D W +S+WRS+KV WDE R R
Sbjct: 291 RVSVGMRFRMMFETEESSVRRYMGTITGISDLDVVRWPNSQWRSVKVGWDESTDGERQPR 350
Query: 296 VSPWEIEPFVASATPNLVQPVLAKNKRP 323
VS WEIEP + P P + KRP
Sbjct: 351 VSLWEIEPL--TTFPTYPSPFPLRLKRP 376
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 56/90 (62%), Gaps = 3/90 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 588
R+ KV G + GR+LD+T Y+ L EL MF ++GQL R+ W++V+ D E D
Sbjct: 751 RTFVKVYKSG-SFGRSLDITKFSSYNELRSELSRMFGLEGQLEDPLRSGWQLVFIDREND 809
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKM 618
++L+GD PW EF N V I I S Q+V++M
Sbjct: 810 VLLLGDGPWPEFVNSVWYIKILSPQEVQQM 839
>gi|413926489|gb|AFW66421.1| hypothetical protein ZEAMMB73_859793 [Zea mays]
Length = 914
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 165/329 (50%), Positives = 226/329 (68%), Gaps = 10/329 (3%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQ--NEP 58
EQ+ ASTN+E+ +IP + LP +++C++ N+ + A+ ETDEVYAQ+TL P Q +P
Sbjct: 58 EQVAASTNKEMEAQIPNYPSLPPQLICQLHNVTMHADAETDEVYAQMTLQPLSPQELKDP 117
Query: 59 TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
P S +P + F K LTASDTSTHGGFSV R+ A + PPLD NQ P QEL+A
Sbjct: 118 FLPAELGTASNQP-TNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFNQQPPAQELIA 176
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
KDLHG +W+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ +N +L +G+R
Sbjct: 177 KDLHGNDWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRRAN 236
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAV-N 235
R Q+ MPSSV+SS SMH+G+LA A+HA +T + F ++Y PR S +F+I + KY++AV +
Sbjct: 237 RPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFTIFYNPRASPCEFVIPMAKYVKAVYH 296
Query: 236 NKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPD 294
+ +VGMR++M FE E+S RR+ GT+ G+ D P W +S WRS+KV WDE + +
Sbjct: 297 TRISVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGEKQP 356
Query: 295 RVSPWEIEPFVASATPNLVQPVLAKNKRP 323
RVS WEIEP + P P KRP
Sbjct: 357 RVSLWEIEPL--TTFPMYPSPFALGLKRP 383
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 58/94 (61%), Gaps = 4/94 (4%)
Query: 534 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMML 591
KV G VGR LD+T YD L E+ +F ++GQL R+ W++V+ D E D++L
Sbjct: 785 VKVYKSGT-VGRLLDITRFSSYDELRSEVGRLFGLEGQLEDPLRSGWQLVFVDREDDVLL 843
Query: 592 VGDDPWHEFCNMVKRIFICSSQDVKKMS-PGSKL 624
VGDDPW EF N V I I S ++V++M PG +L
Sbjct: 844 VGDDPWQEFVNSVSCIKILSPEEVQRMGKPGIQL 877
>gi|115444427|ref|NP_001045993.1| Os02g0164900 [Oryza sativa Japonica Group]
gi|75259114|sp|Q6H6V4.1|ARFF_ORYSJ RecName: Full=Auxin response factor 6; AltName: Full=OsARF6a
gi|158512870|sp|A2X1A1.1|ARFF_ORYSI RecName: Full=Auxin response factor 6; AltName: Full=OsARF6a
gi|49388055|dbj|BAD25169.1| putative auxin response transcription factor(ARF6) [Oryza sativa
Japonica Group]
gi|49388412|dbj|BAD25545.1| putative auxin response transcription factor(ARF6) [Oryza sativa
Japonica Group]
gi|113535524|dbj|BAF07907.1| Os02g0164900 [Oryza sativa Japonica Group]
gi|125538216|gb|EAY84611.1| hypothetical protein OsI_05979 [Oryza sativa Indica Group]
gi|125580929|gb|EAZ21860.1| hypothetical protein OsJ_05506 [Oryza sativa Japonica Group]
gi|215697842|dbj|BAG92035.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 908
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 166/329 (50%), Positives = 226/329 (68%), Gaps = 10/329 (3%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQ--NEP 58
EQ+ ASTN+E+ +IP + LP +++C++ N+ + A+ ETDEVYAQ+TL P Q +P
Sbjct: 58 EQVAASTNKEMESQIPNYPNLPPQLICQLHNVTMHADAETDEVYAQMTLQPLSPQELKDP 117
Query: 59 TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
P S +P + F K LTASDTSTHGGFSV R+ A + PPLD Q P QEL+A
Sbjct: 118 FLPAELGTASKQPTNY-FCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELMA 176
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
KDLHG EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ ++ +L +G+R
Sbjct: 177 KDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDSNQLLLGIRRAN 236
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-N 235
R Q+ MPSSV+SS SMH+G+LA A+HA +T + F ++Y PR S+F+I L KY++AV +
Sbjct: 237 RPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFTIFYNPRASPSEFVIPLAKYVKAVYH 296
Query: 236 NKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPD 294
+ +VGMR++M FE E+S RR+ GT+ G+ D P W +S WRS+KV WDE + R
Sbjct: 297 TRISVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWMNSHWRSVKVGWDESTAGERQP 356
Query: 295 RVSPWEIEPFVASATPNLVQPVLAKNKRP 323
RVS WEIEP + P P + KRP
Sbjct: 357 RVSLWEIEPL--TTFPMYPSPFPLRLKRP 383
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 57/93 (61%), Gaps = 4/93 (4%)
Query: 535 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLV 592
KV G VGR LD+T Y L E+ +F ++GQL R+ W++V+ D E D++LV
Sbjct: 781 KVYKSGT-VGRLLDITRFSSYHELRSEVGRLFGLEGQLEDPLRSGWQLVFVDREDDVLLV 839
Query: 593 GDDPWHEFCNMVKRIFICSSQDVKKMS-PGSKL 624
GDDPW EF N V I I S Q+V++M PG +L
Sbjct: 840 GDDPWQEFVNSVSCIKILSPQEVQQMGKPGIEL 872
>gi|295844306|gb|ADG43150.1| auxin response factor 16 [Zea mays]
Length = 905
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 165/329 (50%), Positives = 226/329 (68%), Gaps = 10/329 (3%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQ--NEP 58
EQ+ ASTN+E+ +IP + LP +++C++ N+ + A+ ETDEVYAQ+TL P Q +P
Sbjct: 49 EQVAASTNKEMEAQIPNYPSLPPQLICQLHNVTMHADAETDEVYAQMTLQPLSPQELKDP 108
Query: 59 TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
P S +P + F K LTASDTSTHGGFSV R+ A + PPLD NQ P QEL+A
Sbjct: 109 FLPAELGTASNQP-TNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFNQQPPAQELIA 167
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
KDLHG +W+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ +N +L +G+R
Sbjct: 168 KDLHGNDWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRRAN 227
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAV-N 235
R Q+ MPSSV+SS SMH+G+LA A+HA +T + F ++Y PR S +F+I + KY++AV +
Sbjct: 228 RPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFTIFYNPRASPCEFVIPMAKYVKAVYH 287
Query: 236 NKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPD 294
+ +VGMR++M FE E+S RR+ GT+ G+ D P W +S WRS+KV WDE + +
Sbjct: 288 TRISVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGEKQP 347
Query: 295 RVSPWEIEPFVASATPNLVQPVLAKNKRP 323
RVS WEIEP + P P KRP
Sbjct: 348 RVSLWEIEPL--TTFPMYPSPFALGLKRP 374
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 58/94 (61%), Gaps = 4/94 (4%)
Query: 534 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMML 591
KV G VGR LD+T YD L E+ +F ++GQL R+ W++V+ D E D++L
Sbjct: 776 VKVYKSGT-VGRLLDITRFSSYDELRSEVGRLFGLEGQLEDPLRSGWQLVFVDREDDVLL 834
Query: 592 VGDDPWHEFCNMVKRIFICSSQDVKKMS-PGSKL 624
VGDDPW EF N V I I S ++V++M PG +L
Sbjct: 835 VGDDPWQEFVNSVSCIKILSPEEVQRMGKPGIQL 868
>gi|224104665|ref|XP_002313521.1| predicted protein [Populus trichocarpa]
gi|222849929|gb|EEE87476.1| predicted protein [Populus trichocarpa]
Length = 713
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 162/354 (45%), Positives = 221/354 (62%), Gaps = 17/354 (4%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPS------ 54
+EQL AS++ ++ +P F L +I C+VVN+ L+A +E DEVY ++TLLP+P
Sbjct: 68 LEQL-ASSSPFSHRDMPNFDLHPQIFCKVVNVQLLANRENDEVYTRLTLLPQPEVVGQDL 126
Query: 55 -----QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQ 109
Q + A + H F K LTASDTSTHGGFSV R+ A +C P LD Q
Sbjct: 127 EGKELQELGVDGEGDDASPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPSLDYKQ 186
Query: 110 STPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGE 169
P+QEL+AKDLHG EWRF+HI+RGQPRRHLLTTGWS FV+ K LV+GD +FLRGE GE
Sbjct: 187 QRPSQELLAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGEGGE 246
Query: 170 LHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQ--FIISL 227
L +G+R AR ++ +P SV Q+ L+ S+A++T+++F V Y PR + F++
Sbjct: 247 LRLGIRRAARPRNGLPDSVTGKQNSLPSALSLVSNAISTKSVFTVSYSPRATHAVFVVPY 306
Query: 228 NKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPH-WKDSKWRSLKVQWDE 286
KY++++ N +G R+KMRFE +DSPERR SG V G D P+ W +SKWR L V+WDE
Sbjct: 307 QKYIKSITNAVCIGTRFKMRFEMDDSPERRCSGVVTGTADLDPYKWPNSKWRCLMVRWDE 366
Query: 287 PASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASA 340
+RVSPWEI+ V + P L+ + K+ R ++ P D P A
Sbjct: 367 DVISDHQERVSPWEIDASV--SLPPLIIQSSPRLKKLRTGLQAAPPDKPIAGGG 418
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/93 (51%), Positives = 65/93 (69%), Gaps = 1/93 (1%)
Query: 528 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT-RTKWEIVYTDDE 586
TS RS TKV QG VGRA+DL+ L GY L++ELE +F ++G L W I+YTD E
Sbjct: 592 TSKRSCTKVHKQGSLVGRAIDLSRLNGYSDLLNELERLFSMEGLLRNPEEGWRILYTDSE 651
Query: 587 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
D+M+VGDDPW EFCN+ +I I + ++V+KM+
Sbjct: 652 NDVMVVGDDPWLEFCNVATKIHIYTQEEVEKMT 684
>gi|326528225|dbj|BAJ93294.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 731
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 159/343 (46%), Positives = 215/343 (62%), Gaps = 14/343 (4%)
Query: 25 ILCRVVNIHLMAEQETDEVYAQITLLPEPSQ-----NEPTTPDPCPADSPRPKV------ 73
+ CRVV++ L A+ TDEVYAQ++LLPE + E T D K
Sbjct: 117 VFCRVVDVTLHADATTDEVYAQLSLLPENEELVRRMREATDDVSGGEDGETVKQRFARMP 176
Query: 74 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 133
H F K LTASDTSTHGGFS R+ A +C P LD NQ P+QELVAKDLHG EW+F+HI+R
Sbjct: 177 HMFCKTLTASDTSTHGGFSAPRRAAEDCFPHLDYNQQRPSQELVAKDLHGTEWKFRHIYR 236
Query: 134 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQS 193
GQPRRHLLTTGWS FV K+LV+GD +FLRG++GEL +GVR + ++ + SQ
Sbjct: 237 GQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGVRRAVQLKNGSAFPALYSQC 296
Query: 194 MHLGVLATASHAVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRFEGE 251
+LG LA +HAV+T++MF ++Y PR SQ FI+ K+ ++++ F+VG R+KMR+E E
Sbjct: 297 SNLGTLANVTHAVSTKSMFQIFYNPRLSQSEFIVPYWKFTKSISQPFSVGWRFKMRYESE 356
Query: 252 DSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPN 311
D+ ERR++G + G D P W+ SKW+ L V+WD+ RP+R+SPWEIE A++ +
Sbjct: 357 DAAERRYTGIITGTVDADPRWRGSKWKCLLVRWDDDGEFRRPNRLSPWEIELTSAASGSH 416
Query: 312 LVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQ 354
L P +K +P L P +P P A AQ + Q
Sbjct: 417 LAAPT-SKRMKPYLPHANPEYTVPYGGGRPDFAESAQLRKVLQ 458
>gi|222539816|gb|ACM66271.1| ARF8 [Solanum melongena]
Length = 891
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 174/350 (49%), Positives = 231/350 (66%), Gaps = 21/350 (6%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ ASTN+E++ IP + LP +++C++ N+ + A+ ETDEVYAQ+TL P Q +
Sbjct: 53 EQVAASTNKEVDAHIPNYPGLPPQLICQLHNLTMHADVETDEVYAQMTLQPLSPQEQK-- 110
Query: 61 PDPC--PADSPRPK---VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQE 115
D C PA+ P + F K LTAS TSTHGGFSV R+ A + PPLD +Q P QE
Sbjct: 111 -DVCLLPAELGIPSKQPTNYFCKTLTASGTSTHGGFSVPRRAAEKVFPPLDYSQQPPCQE 169
Query: 116 LVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR 175
L+AKDLHG EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD +F+ EN +L +G+R
Sbjct: 170 LIAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDAVIFIWNENNQLLLGIR 229
Query: 176 CLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEA 233
R Q+ MPSSV+SS SMH+G+LA A+HA AT + F ++Y PR S+F+I L KY++A
Sbjct: 230 RANRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKA 289
Query: 234 V-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASIT 291
V + + +VGMR++M FE E+S RR+ GT+ G+ D P W +S WRS+KV WDE +
Sbjct: 290 VYHTRISVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGD 349
Query: 292 RPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAP 341
R RVS WEIEP + P P + KRP P LPS P
Sbjct: 350 RQPRVSLWEIEPL--TTFPMYPSPFSLRLKRPW------PSGLPSLTGFP 391
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 55/92 (59%), Gaps = 3/92 (3%)
Query: 529 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 586
+NR KVQ G + GR+LD++ Y L EL MF ++G L R+ W++V D E
Sbjct: 755 TNRIFVKVQKSG-SFGRSLDISKFSSYHELRSELARMFGLEGLLEDPERSGWQLVIVDRE 813
Query: 587 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 618
D++L+GDDPW EF N V I I S +V++M
Sbjct: 814 NDVLLLGDDPWQEFVNNVWYIKILSPYEVQQM 845
>gi|242096722|ref|XP_002438851.1| hypothetical protein SORBIDRAFT_10g027220 [Sorghum bicolor]
gi|241917074|gb|EER90218.1| hypothetical protein SORBIDRAFT_10g027220 [Sorghum bicolor]
Length = 919
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 166/329 (50%), Positives = 227/329 (68%), Gaps = 10/329 (3%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQ--NEP 58
EQ+ ASTN+E+ +IP + LP +++C++ N+ + A+ ETDEVYAQ+TL P Q +P
Sbjct: 59 EQVAASTNKEMESQIPNYPNLPPQLICQLHNVTMHADAETDEVYAQMTLQPLNPQELKDP 118
Query: 59 TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
P + + +P + F K LTASDTSTHGGFSV R+ A + PPLD Q P QEL+A
Sbjct: 119 YLPAELGSANKQPTNY-FCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPCQELMA 177
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
KDLHG EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ +N +L +G+R
Sbjct: 178 KDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRRAN 237
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-N 235
R Q+ MPSSV+SS SMH+G+LA A+HA +T + F ++Y PR S+F+I L KY++AV +
Sbjct: 238 RPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFTIFYNPRASPSEFVIPLAKYVKAVYH 297
Query: 236 NKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPD 294
+ +VGMR++M FE E+S RR+ GT+ G+ D S W +S WRS+KV WDE + R
Sbjct: 298 TRISVGMRFRMLFETEESSVRRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQP 357
Query: 295 RVSPWEIEPFVASATPNLVQPVLAKNKRP 323
RVS WEIEP + P P + KRP
Sbjct: 358 RVSLWEIEPL--TTFPMYPSPFPLRLKRP 384
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 544 GRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEFC 601
GR+LD+T Y L EL +F ++GQL R+ W++V+ D E D++LVGDDPW EF
Sbjct: 799 GRSLDITRFSSYHELRRELGRLFGLEGQLEDPLRSGWQLVFVDREEDVLLVGDDPWQEFV 858
Query: 602 NMVKRIFICSSQDVKKM 618
+ V I I S Q+V++M
Sbjct: 859 STVSCIKILSPQEVQQM 875
>gi|350536917|ref|NP_001234783.1| auxin response factor 8 [Solanum lycopersicum]
gi|154550159|gb|ABS83388.1| auxin response factor 8 [Solanum lycopersicum]
Length = 844
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 160/309 (51%), Positives = 219/309 (70%), Gaps = 6/309 (1%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ A+TN+EL+ IP + LP +++C + N+ + A+ ETDEVYAQ+TL P Q + T
Sbjct: 51 EQVAATTNKELDIHIPNYPNLPPQLICPLHNVTMHADVETDEVYAQMTLQPLTLQEQKDT 110
Query: 61 PDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
P P R + F K LTASDTSTHGGFSV R+ A + PPLD +Q+ P QEL+A+
Sbjct: 111 YLPVELGIPSRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQTPPCQELIAR 170
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ E +L +G+R R
Sbjct: 171 DLHDIEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLFLGIRRATR 230
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NN 236
Q+ MPSSV+SS SMH+G+LA A+HA +T + F+V++ PR S+F+I L+KY++AV +
Sbjct: 231 PQTVMPSSVLSSDSMHIGLLAAAAHAASTNSCFIVFFNPRASPSEFVIPLSKYIKAVYHT 290
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+ +VGMR++M FE E+S RR+ GT+ G+ D P W +S WRS+KV WDE + R R
Sbjct: 291 RVSVGMRFRMLFETEESSVRRYMGTITGIGDLDPVRWANSHWRSVKVGWDESTAGERQPR 350
Query: 296 VSPWEIEPF 304
VS WEIEP
Sbjct: 351 VSLWEIEPL 359
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 533 RTKVQM-QGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDM 589
RT V++ + ++GR+LD+T Y L EL +MF I+G L R+ W++V+ D E D+
Sbjct: 717 RTFVKVYKSASLGRSLDITRFNSYHELRQELGQMFGIEGLLEDPQRSGWQLVFVDRENDV 776
Query: 590 MLVGDDPWHEFCNMVKRIFICSSQDVKKM 618
+L+GDDPW EF N V I I S +DV+K+
Sbjct: 777 LLLGDDPWEEFVNNVWYIKILSPEDVQKL 805
>gi|350539862|ref|NP_001234552.1| auxin response factor 8-1 [Solanum lycopersicum]
gi|302035373|gb|ADK92393.1| auxin response factor 8-1 [Solanum lycopersicum]
Length = 844
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 159/309 (51%), Positives = 220/309 (71%), Gaps = 6/309 (1%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ A+TN+E++ IP + LP +++C++ N+ + A+ ETDEVYAQ+TL P Q + T
Sbjct: 51 EQVAATTNKEVDIHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTLQEQKDT 110
Query: 61 PDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
P P R + F K LTASDTSTHGGFSV R+ A + PPLD +Q+ P QEL+A+
Sbjct: 111 YLPVELGIPSRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQTPPCQELIAR 170
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ E +L +G+R R
Sbjct: 171 DLHDIEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLFLGIRRATR 230
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NN 236
Q+ MPSSV+SS SMH+G+LA A+HA +T + F+V++ PR S+F+I L+KY++AV +
Sbjct: 231 PQTVMPSSVLSSDSMHIGLLAAAAHAASTNSCFIVFFNPRASPSEFVIPLSKYIKAVYHT 290
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+ +VGMR++M FE E+S RR+ GT+ G+ D P W +S WRS+KV WDE + R R
Sbjct: 291 RVSVGMRFRMLFETEESSVRRYMGTITGIGDLDPVRWANSHWRSVKVGWDESTAGERQPR 350
Query: 296 VSPWEIEPF 304
VS WEIEP
Sbjct: 351 VSLWEIEPL 359
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 533 RTKVQM-QGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGDM 589
RT V++ + ++GR+LD+T Y L EL +MF I+G L R+ W++V+ D E D+
Sbjct: 717 RTFVKVYKSASLGRSLDITRFNSYHELRQELGQMFGIEGFLENPQRSGWQLVFVDRENDV 776
Query: 590 MLVGDDPWHEFCNMVKRIFICSSQDVKKM 618
+L+GDDPW EF N V I I S +DV+K+
Sbjct: 777 LLLGDDPWEEFVNNVWYIKILSPEDVQKL 805
>gi|79319169|ref|NP_001031139.1| auxin response factor 13 [Arabidopsis thaliana]
gi|50429007|gb|AAT77165.1| ARF13 [Arabidopsis thaliana]
gi|332193559|gb|AEE31680.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 479
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 181/464 (39%), Positives = 252/464 (54%), Gaps = 83/464 (17%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
+E +E ST EL+ P+F LPSK+ CRVV I ++ TDEVYAQI+L+P+ ++
Sbjct: 52 IELIENSTRDELDHIRPIFDLPSKLRCRVVAIDRKVDKNTDEVYAQISLMPDTTE---VM 108
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
D+ RP V+ FSK+LTASD S GG + +++A EC PPLDM+Q TQ LVAKD
Sbjct: 109 THNTTMDTRRPIVYFFSKILTASDVSLSGGLIIPKQYAIECFPPLDMSQPISTQNLVAKD 168
Query: 121 LHGYEWRFKHIFRGQPRRHLLTT--GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
L+G EW FKH+FRG P+RH+ T+ GWS F T+KRL+ GD FV LRGENGEL G+R
Sbjct: 169 LYGQEWSFKHVFRGTPQRHMFTSGGGWSVFATTKRLIVGDIFVLLRGENGELRFGIRRAK 228
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKF 238
QQ +PSSVIS+ M GV+A+ +A T+ MF V YKPR
Sbjct: 229 HQQGHIPSSVISANCMQHGVIASVVNAFKTKCMFNVVYKPR------------------- 269
Query: 239 AVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSP 298
M+FEG+D E+R+ GT++GV D SPHWKDS+WRSLKVQWDE + RP++VSP
Sbjct: 270 -------MQFEGKDFSEKRYDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVSP 322
Query: 299 WEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVT 358
W+IE + S+ ++ Q L K K
Sbjct: 323 WDIEHLIPSS--DISQSSLKKKKH------------------------------------ 344
Query: 359 AEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISA 418
W + ++ SN + + + SP + + + AI+D+K +S
Sbjct: 345 -----------WLQLNEIGATLSNLWTCQEIGQRSMNSP-ISVPEFSYPNAIEDSKFLSG 392
Query: 419 WPA-HSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIEL 461
HS + P+ + N+D +++ + TE TSC LFG++L
Sbjct: 393 LLLNHSLLAIPNENY-NSDQMIQPRKEDITTEATTSCLLFGVDL 435
>gi|414878008|tpg|DAA55139.1| TPA: hypothetical protein ZEAMMB73_057592 [Zea mays]
Length = 886
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 162/310 (52%), Positives = 221/310 (71%), Gaps = 6/310 (1%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP--EPSQNEP 58
EQ+ ASTN+E++ +IP + LP +++C++ N+ + A+ ET EVYAQ+TL P Q EP
Sbjct: 53 EQVAASTNKEVDAQIPNYPNLPPQLICQLHNVTMHADAETGEVYAQMTLQPLSPEEQKEP 112
Query: 59 TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
P A S +P + F K LTASDTSTHGGFSV R+ A + PPLD +Q P QELVA
Sbjct: 113 FLPIELGAGSNQPTNY-FCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQHPPVQELVA 171
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ +N +L +G+R
Sbjct: 172 RDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSIIFIWNDNNQLLLGIRRAN 231
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAV-NNK 237
R Q+ MPSSV+SS SMH+G+LA A+HA AT + F ++Y PR S+F+I L KY++AV + +
Sbjct: 232 RPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRPSEFVIPLAKYVKAVYHTR 291
Query: 238 FAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRV 296
+VGMR++M FE E+S RR+ GT+ + D S W +S WRS+KV WDE + + RV
Sbjct: 292 VSVGMRFRMLFETEESSVRRYMGTITCISDLDSERWPNSHWRSVKVGWDESTAGDKQPRV 351
Query: 297 SPWEIEPFVA 306
S WEIEP +A
Sbjct: 352 SLWEIEPLMA 361
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
Query: 544 GRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEFC 601
GR+LD+T Y L ELE +F ++GQL R+ W++V+ D E D++LVGDDPW EF
Sbjct: 765 GRSLDITRFSSYYELRSELERLFGLEGQLEDPVRSGWQLVFVDRENDILLVGDDPWQEFV 824
Query: 602 NMVKRIFICSSQDVKKMSPGS 622
N V I I S QDV++M G
Sbjct: 825 NSVWCIKILSPQDVQQMVRGG 845
>gi|295844318|gb|ADG43156.1| auxin response factor 22 [Zea mays]
Length = 925
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 165/329 (50%), Positives = 225/329 (68%), Gaps = 10/329 (3%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQ--NEP 58
EQ+ ASTN+E+ +IP + LP +++C++ N+ + A+ ET+EVYAQ+TL P Q +P
Sbjct: 72 EQVAASTNKEMESQIPSYPNLPPQLICQLHNVTMQADAETEEVYAQMTLQPLNPQELKDP 131
Query: 59 TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
P S +P + F K LTASDTSTHGGFSV R+ A + PPLD Q P QEL+A
Sbjct: 132 YLPAELGLVSKQPTNY-FCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPCQELMA 190
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
DLHG EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ +N +L +G+R
Sbjct: 191 TDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRRAN 250
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-N 235
R Q+ MPSSV+SS SMH+G+LA A+HA +T + F ++Y PR S+F+I L KY++AV +
Sbjct: 251 RPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFTIFYNPRASPSEFVIPLAKYVKAVYH 310
Query: 236 NKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPD 294
+ +VGMR++M FE E+S RR+ GT+ G+ D S W +S WRS+KV WDE + R
Sbjct: 311 TRISVGMRFRMLFETEESSVRRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGDRQP 370
Query: 295 RVSPWEIEPFVASATPNLVQPVLAKNKRP 323
RVS WEIEP + P P + KRP
Sbjct: 371 RVSLWEIEPL--TTFPTYTSPFPLRLKRP 397
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 544 GRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEFC 601
GR+LD+T Y L EL +F ++GQL R+ W++V+ D E D++LVGDDPW EF
Sbjct: 804 GRSLDITRFSSYHELRRELGRLFGLEGQLEDPLRSGWQLVFVDREEDVLLVGDDPWQEFA 863
Query: 602 NMVKRIFICSSQDVKKM 618
+ V I I S Q+V++M
Sbjct: 864 STVSCIKILSPQEVQQM 880
>gi|449462367|ref|XP_004148912.1| PREDICTED: auxin response factor 8-like [Cucumis sativus]
Length = 836
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 162/309 (52%), Positives = 218/309 (70%), Gaps = 6/309 (1%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ A+TN+E++ IP + LP +++C++ N+ + A+ ETDEVYAQ+TL P +Q + T
Sbjct: 52 EQVAATTNKEVDGHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTAQEQKDT 111
Query: 61 PDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
P P R + F K LTASDTSTHGGFSV R+ A + PPLD +Q P QEL+AK
Sbjct: 112 FLPMELGIPSRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIAK 171
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ E +L +G+R R
Sbjct: 172 DLHDIEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATR 231
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NN 236
Q+ MPSSV+SS SMH+G+LA A+HA AT + F V+Y PR S+F+I L KY++AV +
Sbjct: 232 PQTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFYNPRASPSEFVIPLTKYVKAVFHT 291
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+ +VGMR++M FE E+S RR+ GT+ G+ D P W +S WRS+KV WDE + R R
Sbjct: 292 RVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPR 351
Query: 296 VSPWEIEPF 304
VS WEIEP
Sbjct: 352 VSLWEIEPL 360
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 59/95 (62%), Gaps = 4/95 (4%)
Query: 529 SNRSRTKVQMQGVA-VGRALDLTTLVGYDHLIDELEEMFDIKGQL---HTRTKWEIVYTD 584
SN +RT V++ VGR+LD++ Y L +EL +MF I+GQL R+ W++V+ D
Sbjct: 706 SNPTRTFVKVYKTGSVGRSLDISRFSSYQELREELAQMFGIEGQLVEDPRRSGWQLVFVD 765
Query: 585 DEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
E D++L+GDDPW F N V I I S +D +K+
Sbjct: 766 RENDVLLLGDDPWEAFVNNVGFIKILSPEDFQKLG 800
>gi|19352041|dbj|BAB85914.1| auxin response factor 6a [Oryza sativa]
Length = 396
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 166/329 (50%), Positives = 226/329 (68%), Gaps = 10/329 (3%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQ--NEP 58
EQ+ ASTN+E+ +IP + LP +++C++ N+ + A+ ETDEVYAQ+TL P Q +P
Sbjct: 37 EQVAASTNKEMESQIPNYPNLPPQLICQLHNVTMHADAETDEVYAQMTLQPLSPQELKDP 96
Query: 59 TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
P S +P + F K LTASDTSTHGGFSV R+ A + PPLD Q P QEL+A
Sbjct: 97 FLPAELGTASKQP-TNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELMA 155
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
KDLHG EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ ++ +L +G+R
Sbjct: 156 KDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDSNQLLLGIRRAN 215
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-N 235
R Q+ MPSSV+SS SMH+G+LA A+HA +T + F ++Y PR S+F+I L KY++AV +
Sbjct: 216 RPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFTIFYNPRASPSEFVIPLAKYVKAVYH 275
Query: 236 NKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPD 294
+ +VGMR++M FE E+S RR+ GT+ G+ D P W +S WRS+KV WDE + R
Sbjct: 276 TRISVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWMNSHWRSVKVGWDESTAGERQP 335
Query: 295 RVSPWEIEPFVASATPNLVQPVLAKNKRP 323
RVS WEIEP + P P + KRP
Sbjct: 336 RVSLWEIEPL--TTFPMYPSPFPLRLKRP 362
>gi|356549132|ref|XP_003542951.1| PREDICTED: auxin response factor 6-like [Glycine max]
Length = 895
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 165/328 (50%), Positives = 225/328 (68%), Gaps = 8/328 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ STN+E++ IP + LP +++C++ N+ + A+ ETDEVYAQ+TL P Q +
Sbjct: 51 EQVAVSTNKEVDAHIPNYPSLPPQLICQLHNMTMHADAETDEVYAQMTLQPLNPQEQKEA 110
Query: 61 PDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
P +P + + F K LTASDTSTHGGFSV R+ A + PPLD +Q P QEL+A+
Sbjct: 111 YLPAELGTPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIAR 170
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLHG EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ E +L +G+R R
Sbjct: 171 DLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANR 230
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NN 236
Q+ MPSSV+SS SMHLG+LA A+HA AT + F ++Y PR S+F+I L KY++AV +
Sbjct: 231 PQTVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHT 290
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+ +VGMR++M FE E+S RR+ GT+ G+ D P W++S WRS+KV WDE + R R
Sbjct: 291 RVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWQNSHWRSVKVGWDESTAGDRQPR 350
Query: 296 VSPWEIEPFVASATPNLVQPVLAKNKRP 323
VS WEIEP + P P + KRP
Sbjct: 351 VSLWEIEPL--TTFPMYPSPFPLRLKRP 376
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 3/91 (3%)
Query: 530 NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEG 587
N++ KV G + GR+LD+T Y L EL MF ++G+L R+ W++V+ D E
Sbjct: 761 NKTFVKVYKSG-SFGRSLDITKFSSYHELRGELARMFGLEGELEDPVRSGWQLVFVDREN 819
Query: 588 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 618
D++L+GD PW EF N V I I S Q+V++M
Sbjct: 820 DVLLLGDGPWPEFVNSVWCIKILSPQEVQQM 850
>gi|102139794|gb|ABF69979.1| transcriptional factor B3 family protein [Musa acuminata]
Length = 898
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 163/311 (52%), Positives = 222/311 (71%), Gaps = 12/311 (3%)
Query: 3 QLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTP 61
++ ASTN+E++ +IP + LP +++C++ N+ + A+ ETDEVYAQ+TL P +Q +
Sbjct: 41 RVAASTNKEVDSQIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSAQEQK--- 97
Query: 62 DP-CPADSPRPK---VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELV 117
DP PAD P + F K LTASDTSTHGGFSV R+ A + PPLD +Q P QELV
Sbjct: 98 DPYLPADLGTPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELV 157
Query: 118 AKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCL 177
A+DLHG EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ EN +L +G+R
Sbjct: 158 ARDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNENNQLLLGIRRA 217
Query: 178 ARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV- 234
R Q+ MPSSV+SS SMH+G+LA A+HA AT + F ++Y PR S+F+I L KY++AV
Sbjct: 218 NRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLTKYVKAVY 277
Query: 235 NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRP 293
+ + +VGMR++M FE E+S RR+ GT+ G+ D P W +S WRS+KV WDE + +
Sbjct: 278 HTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGEKQ 337
Query: 294 DRVSPWEIEPF 304
RVS WEIEP
Sbjct: 338 PRVSLWEIEPL 348
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 542 AVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHE 599
+ GR+LD+T Y L EL +F ++GQL R+ W++V+ D E D++LVGDDPW E
Sbjct: 774 SFGRSLDITRFSSYHELRSELGHLFGLEGQLEDPLRSGWQLVFVDREDDVLLVGDDPWQE 833
Query: 600 FCNMVKRIFICSSQDVKKM 618
F N V I I S ++V++M
Sbjct: 834 FVNSVSCIKILSPEEVQQM 852
>gi|225030806|gb|ACN79516.1| auxin response factor 3b [Lotus japonicus]
Length = 718
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 157/337 (46%), Positives = 220/337 (65%), Gaps = 25/337 (7%)
Query: 16 IPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQ-------------NEPTTPD 62
+ + +P+ + CRV+++ L AE+ +DEVY Q+ L+PE Q E T
Sbjct: 84 VTAYNIPTHVFCRVLDVKLHAEEGSDEVYCQVLLIPESEQVEKNLGEGDTDADGEEDTEA 143
Query: 63 PCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLH 122
+ +P H F K LTASDTSTHGGFSV R+ A +C PPLD +Q P+QELVAKDLH
Sbjct: 144 MVKSTTP----HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLH 199
Query: 123 GYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQS 182
G EW+F+HI+RGQPRRHLLTTGWS FV K+LV+GD +FLRG++GEL +G+R A+ +S
Sbjct: 200 GLEWKFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGIRRAAQLKS 259
Query: 183 SMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAV 240
+ S Q + G L ++A++++ F Y PR +S+FII +NK++++++ ++V
Sbjct: 260 VGSFAAPSGQHLSPGTLMDVANALSSRCAFSACYNPRVSSSEFIIPVNKFMKSLDCSYSV 319
Query: 241 GMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPW 299
GMR++MRFE EDS ERRF+G V+G+ D P W SKWR L V+WD+ R +RVSPW
Sbjct: 320 GMRFRMRFETEDSAERRFTGLVLGISDVDPVRWPGSKWRCLLVRWDD-IEAGRHNRVSPW 378
Query: 300 EIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPS 336
EIEPF SA+ NL+ L KR R+ M ++ P+
Sbjct: 379 EIEPF-GSASNNLMAAGL---KRTRIGMTSTKMEFPA 411
>gi|449433545|ref|XP_004134558.1| PREDICTED: auxin response factor 6-like [Cucumis sativus]
Length = 902
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 176/376 (46%), Positives = 235/376 (62%), Gaps = 38/376 (10%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQ--NEP 58
EQ+ STN+E++ IP + LP +++C++ N+ + A+ ETDEVYAQ+TL P +Q EP
Sbjct: 53 EQVAISTNREVDAHIPSYPSLPPQLICQLHNVTMHADIETDEVYAQMTLQPLTAQEQKEP 112
Query: 59 TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
P A S +P + F K LTASDTSTHGGFSV R+ A + PPLD +Q P QEL+A
Sbjct: 113 YLPAELGAPSKQP-TNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIA 171
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ E +L +G+R
Sbjct: 172 RDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIWNEKNQLLLGIRRAN 231
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-N 235
R Q+ MPSSV+SS SMHLG+LA A+HA AT + F ++Y PR S+FII L KY++AV +
Sbjct: 232 RPQTVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFIIPLAKYVKAVYH 291
Query: 236 NKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPD 294
+ +VGMR++M FE E+S RR+ GT+ G+ D S W +S WRS+KV WDE + R
Sbjct: 292 TRVSVGMRFRMLFETEESSVRRYMGTITGISDLDSTRWPNSHWRSVKVGWDESTAGERQP 351
Query: 295 RVSPWEIEPFVASATPNLVQPVLAKNKRP----------------------------RLS 326
RVS WEIEP + P P + KRP L
Sbjct: 352 RVSLWEIEPL--TTFPMYPSPFPLRLKRPWPTGFPSFHGLKEDDLGLNSQLMWLRGDGLD 409
Query: 327 MEVPPLDLPSAASAPW 342
+ PL+ P APW
Sbjct: 410 RGIQPLNFPGIGVAPW 425
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 98/225 (43%), Gaps = 25/225 (11%)
Query: 407 QEAIDDNKNISAWPAH-SGHSTPHPSKPNNDTLLEQVET--------GRKTETGTSCRLF 457
Q + +NI PA+ S ++ P P + L+Q G E +
Sbjct: 644 QFVLSQGENIGTTPANISQNAFSLPPFPGRECSLDQGNVDPQSNLLFGVNIEPSSLLMQN 703
Query: 458 GIELINHATSSAPSEKVPVSS--LTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQV 515
G+ + S + S +P SS + T G S + + F + + QV
Sbjct: 704 GMPNLRGICSDSDSTAIPFSSNYVNTAGTNFSANPTGTGTPSNCNEDSGFLQSPENTGQV 763
Query: 516 SPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH-- 573
+P R+ KV G + GR+LD++ Y L EL MF ++G+L
Sbjct: 764 NPP-----------TRTFVKVYKSG-SFGRSLDISKFSSYHQLRSELAHMFGLEGELEDP 811
Query: 574 TRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 618
R+ W++V+ D E D++L+GDDPW EF N V I I S Q+V+ M
Sbjct: 812 LRSGWQLVFVDRENDVLLLGDDPWPEFVNSVWCIKILSPQEVQDM 856
>gi|356541288|ref|XP_003539110.1| PREDICTED: auxin response factor 4-like [Glycine max]
Length = 791
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 154/306 (50%), Positives = 202/306 (66%), Gaps = 21/306 (6%)
Query: 16 IPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEP--------------SQNEPTTP 61
IP + L +I CRVVN+ L+A +E DEVY Q+TLLP+ E
Sbjct: 94 IPTYDLQPQIFCRVVNVQLLANKENDEVYTQVTLLPQAELEGMYLEGKELEELGAEEEGD 153
Query: 62 DPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDL 121
D P S H F K LTASDTSTHGGFSV R+ A +C PPLD Q P+QELVAKDL
Sbjct: 154 DRSPTKS---TPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDL 210
Query: 122 HGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQ 181
H EW+F+HI+RGQPRRHLLTTGWS FV+ K LV+GD +FLRGENGEL +G+R R +
Sbjct: 211 HDVEWKFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGENGELRLGIRRAVRPR 270
Query: 182 SSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFA 239
+ +P SVI SQ+ + VL++ ++A++T++ F V+Y PR SQ F++ KY++++ N +
Sbjct: 271 NDLPESVIGSQNCYPNVLSSVANAISTKSKFHVFYSPRASQADFVVPYQKYVKSIKNPVS 330
Query: 240 VGMRYKMRFEGEDSPERR-FSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVS 297
+G R+KMRFE ++S ERR SG ++G D P+ W SKWR L V+WDE DRVS
Sbjct: 331 IGTRFKMRFEMDESQERRCCSGMLIGTSDLDPYRWPKSKWRCLMVRWDEDIETNHKDRVS 390
Query: 298 PWEIEP 303
PWEI+P
Sbjct: 391 PWEIDP 396
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 81/132 (61%), Gaps = 8/132 (6%)
Query: 489 ISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALD 548
+S + GK + K F + ++ +K+SC TKV QG VGRA+D
Sbjct: 628 VSIDNNVQGKVNACKLFGFSLSGETTTQNLQNSAKRSC-------TKVHKQGSLVGRAID 680
Query: 549 LTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRI 607
L+ L GY+ L+ ELE +F ++G L K W+I+YTD E D+M+VGDDPWHEFC++V +I
Sbjct: 681 LSRLSGYNDLLSELERLFSMEGLLKDPDKGWKILYTDSENDIMVVGDDPWHEFCDVVSKI 740
Query: 608 FICSSQDVKKMS 619
I + ++V+KM+
Sbjct: 741 HIYTQEEVEKMT 752
>gi|295844310|gb|ADG43152.1| auxin response factor 18 [Zea mays]
Length = 913
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 166/329 (50%), Positives = 227/329 (68%), Gaps = 10/329 (3%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQ--NEP 58
EQ+ ASTN+E+ +IP + LP +++C++ N+ + A+ ETDEVYAQ+TL P Q +P
Sbjct: 58 EQVAASTNKEIESQIPNYPNLPPQLICQLHNVTMHADAETDEVYAQMTLQPLNPQELKDP 117
Query: 59 TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
P + + +P + F K LTASDTSTHGGFSV R+ A + PPLD Q P QEL+A
Sbjct: 118 YLPAELGSANKQPTNY-FCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPCQELMA 176
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
KDLHG EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ +N +L +G+R
Sbjct: 177 KDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRRAN 236
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-N 235
R Q+ MPSSV+SS SMH+G+LA A+HA +T + F ++Y PR S+F+I L KY++AV +
Sbjct: 237 RPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFTIFYNPRASPSEFVIPLVKYVKAVYH 296
Query: 236 NKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPD 294
+ +VGMR++M FE E+S RR+ GT+ G+ D S W +S WRS+KV WDE + R
Sbjct: 297 TRISVGMRFRMLFETEESSVRRYMGTITGICDLDSVRWPNSHWRSVKVGWDESTAGERQP 356
Query: 295 RVSPWEIEPFVASATPNLVQPVLAKNKRP 323
RVS WEIEP + P P + KRP
Sbjct: 357 RVSLWEIEPL--TTFPMYPSPFPLRLKRP 383
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 544 GRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEFC 601
GR+LD+T Y L EL +F ++GQL R+ W++V+ + E D++LVGDDPW EF
Sbjct: 792 GRSLDITRFSSYHELRRELGRLFGLEGQLEDPLRSGWQLVFVNREEDVLLVGDDPWQEFV 851
Query: 602 NMVKRIFICSSQDVKKM 618
+ V I I S Q+V++M
Sbjct: 852 STVSCIKILSPQEVQQM 868
>gi|242088827|ref|XP_002440246.1| hypothetical protein SORBIDRAFT_09g028450 [Sorghum bicolor]
gi|241945531|gb|EES18676.1| hypothetical protein SORBIDRAFT_09g028450 [Sorghum bicolor]
Length = 739
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 159/349 (45%), Positives = 224/349 (64%), Gaps = 19/349 (5%)
Query: 21 LPSKILCRVVNIHLMAEQETDEVYAQITLLPE---------PSQNEPTTPDPCPADSPRP 71
LP + CRVV++ L A+ TDEVYAQ+ L+ E + + D ++ +
Sbjct: 103 LPPHVFCRVVDVTLHADASTDEVYAQLALVAENEDVARRLRGGSEDGSAGDGDDGEAVKQ 162
Query: 72 KV----HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWR 127
+ H F K LTASDTSTHGGFSV R+ A +C PPLD +Q P+QELVAKDLHG EWR
Sbjct: 163 RFSRMPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWR 222
Query: 128 FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSS 187
F+HI+RGQPRRHLLTTGWS FV K+LV+GD +FLRG++GEL +GVR A+ ++
Sbjct: 223 FRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGVRRAAQLKNGSAFP 282
Query: 188 VISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRYK 245
+ +Q +LG LA +HAVAT+++F +YY PR SQ FII +K++++ + +F+ G+R+K
Sbjct: 283 ALYNQCSNLGSLANVAHAVATKSVFHIYYNPRLSQSEFIIPYSKFMKSFSQQFSAGLRFK 342
Query: 246 MRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 305
MR+E +D+ ERR +G + G+ D P W+ SKW+ L V+WD+ RP+R+SPWEIE
Sbjct: 343 MRYESDDASERRCTGVIAGIGDADPMWRGSKWKCLMVRWDDDVDFRRPNRISPWEIELTS 402
Query: 306 ASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQ 354
+ + +L P AK +P L P +P+ + P A AQ H + Q
Sbjct: 403 SVSGSHLSAPN-AKRLKPCLP---PDYLVPNGSGCPDFAESAQFHKVLQ 447
>gi|47496696|dbj|BAD19063.1| auxin response factor 3 [Cucumis sativus]
Length = 916
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 176/376 (46%), Positives = 235/376 (62%), Gaps = 38/376 (10%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQ--NEP 58
EQ+ STN+E++ IP + LP +++C++ N+ + A+ ETDEVYAQ+TL P +Q EP
Sbjct: 51 EQVAISTNREVDAHIPSYPSLPPQLICQLHNVTMHADIETDEVYAQMTLQPLTAQEQKEP 110
Query: 59 TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
P A S +P + F K LTASDTSTHGGFSV R+ A + PPLD +Q P QEL+A
Sbjct: 111 YLPAELGAPSKQP-TNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIA 169
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ E +L +G+R
Sbjct: 170 RDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIWNEKNQLLLGIRRAN 229
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-N 235
R Q+ MPSSV+SS SMHLG+LA A+HA AT + F ++Y PR S+FII L KY++AV +
Sbjct: 230 RPQTVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFIIPLAKYVKAVYH 289
Query: 236 NKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPD 294
+ +VGMR++M FE E+S RR+ GT+ G+ D S W +S WRS+KV WDE + R
Sbjct: 290 TRVSVGMRFRMLFETEESSVRRYMGTITGISDLDSTRWPNSHWRSVKVGWDESTAGERQP 349
Query: 295 RVSPWEIEPFVASATPNLVQPVLAKNKRP----------------------------RLS 326
RVS WEIEP + P P + KRP L
Sbjct: 350 RVSLWEIEPL--TTFPMYPSPFPLRLKRPWPTGFPSFHGLKEDDLGLNSQLMWLRGDGLD 407
Query: 327 MEVPPLDLPSAASAPW 342
+ PL+ P APW
Sbjct: 408 RGIQPLNFPGIGVAPW 423
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 97/225 (43%), Gaps = 25/225 (11%)
Query: 407 QEAIDDNKNISAWPAH-SGHSTPHPSKPNNDTLLEQVET--------GRKTETGTSCRLF 457
Q + +NI PA+ S ++ P P + L+Q G E +
Sbjct: 658 QFVLSQGENIGTTPANISQNAFTLPPFPGRECSLDQGNVDPQSNLLFGVNIEPSSLLMQN 717
Query: 458 GIELINHATSSAPSEKVPVSS--LTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQV 515
G+ + S + S +P SS + T G S + + F + QV
Sbjct: 718 GMPNLRGICSDSDSTAIPFSSNYVNTAGTNFSANPTGTGTPSNCNEDSGFLHSPENTGQV 777
Query: 516 SPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH-- 573
+P + + KV G + GR+LD++ Y L EL MF ++G+L
Sbjct: 778 NPPTT-----------TFVKVYKSG-SFGRSLDISKFSRYHQLRSELAHMFGLEGELEDP 825
Query: 574 TRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 618
R+ W++V+ D E D++L+GDDPW EF N V I I S Q+V+ M
Sbjct: 826 LRSGWQLVFVDRENDVLLLGDDPWPEFVNSVWCIKILSPQEVQDM 870
>gi|449518891|ref|XP_004166469.1| PREDICTED: auxin response factor 6-like [Cucumis sativus]
Length = 916
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 169/329 (51%), Positives = 226/329 (68%), Gaps = 10/329 (3%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQ--NEP 58
EQ+ STN+E++ IP + LP +++C++ N+ + A+ ETDEVYAQ+TL P +Q EP
Sbjct: 51 EQVAISTNREVDAHIPSYPSLPPQLICQLHNVTMHADIETDEVYAQMTLQPLTAQEQKEP 110
Query: 59 TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
P A S +P + F K LTASDTSTHGGFSV R+ A + PPLD +Q P QEL+A
Sbjct: 111 YLPAELGAPSKQP-TNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIA 169
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ E +L +G+R
Sbjct: 170 RDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIWNEKNQLLLGIRRAN 229
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-N 235
R Q+ MPSSV+SS SMHLG+LA A+HA AT + F ++Y PR S+FII L KY++AV +
Sbjct: 230 RPQTVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFIIPLAKYVKAVYH 289
Query: 236 NKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPD 294
+ +VGMR++M FE E+S RR+ GT+ G+ D S W +S WRS+KV WDE + R
Sbjct: 290 TRVSVGMRFRMLFETEESSVRRYMGTITGISDLDSTRWPNSHWRSVKVGWDESTAGERQP 349
Query: 295 RVSPWEIEPFVASATPNLVQPVLAKNKRP 323
RVS WEIEP + P P + KRP
Sbjct: 350 RVSLWEIEPL--TTFPMYPSPFPLRLKRP 376
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 98/225 (43%), Gaps = 25/225 (11%)
Query: 407 QEAIDDNKNISAWPAH-SGHSTPHPSKPNNDTLLEQVET--------GRKTETGTSCRLF 457
Q + +NI PA+ S ++ P P + L+Q G E +
Sbjct: 658 QFVLSQGENIGTTPANISQNAFSLPPFPGRECSLDQGNVDPQSNLLFGVNIEPSSLLMQN 717
Query: 458 GIELINHATSSAPSEKVPVSS--LTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQV 515
G+ + S + S +P SS + T G S + + F + + QV
Sbjct: 718 GMPNLRGICSDSDSTAIPFSSNYVNTAGTNFSANPTGTGTPSNCNEDSGFLQSPENTGQV 777
Query: 516 SPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH-- 573
+P R+ KV G + GR+LD++ Y L EL MF ++G+L
Sbjct: 778 NPP-----------TRTFVKVYKSG-SFGRSLDISKFSSYHQLRSELAHMFGLEGELEDP 825
Query: 574 TRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 618
R+ W++V+ D E D++L+GDDPW EF N V I I S Q+V+ M
Sbjct: 826 LRSGWQLVFVDRENDVLLLGDDPWPEFVNSVWCIKILSPQEVQDM 870
>gi|357132570|ref|XP_003567902.1| PREDICTED: auxin response factor 15-like [Brachypodium distachyon]
Length = 730
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 160/346 (46%), Positives = 214/346 (61%), Gaps = 20/346 (5%)
Query: 25 ILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKV----------- 73
+ CRVV++ L A+ TDEVYAQ++LLPE NE
Sbjct: 113 VFCRVVDVSLHADASTDEVYAQLSLLPE---NEEAVRRKREGAEEGSGGEDGETGKQRFS 169
Query: 74 ---HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKH 130
H F K LTASDTSTHGGFSV R+ A +C PPLD +Q P+QEL AKDLHG EW+F+H
Sbjct: 170 RMPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELAAKDLHGTEWKFRH 229
Query: 131 IFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVIS 190
I+RGQPRRHLLTTGWS FV K+LV+GD +FLRG++GEL +GVR A+ ++ +
Sbjct: 230 IYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGVRRAAQLKTGSAFPGLY 289
Query: 191 SQSMHLGVLATASHAVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRF 248
SQ +LG LA +HAVAT+ MF +YY PR SQ FI+ K+ ++++ F+VG+R+KMR+
Sbjct: 290 SQCSNLGTLANVAHAVATKGMFRIYYNPRLSQSEFIVPYWKFTKSLSQPFSVGLRFKMRY 349
Query: 249 EGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASA 308
E ED+ ERR++G + G D P W+ SKW+ L V+WD+ RP+RVSPWEIE +++
Sbjct: 350 ESEDAAERRYTGIITGTGDADPMWRGSKWKCLLVRWDDDVECRRPNRVSPWEIELTSSAS 409
Query: 309 TPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQ 354
+L P +K +P LS P +P P AQ + Q
Sbjct: 410 GSHLATPA-SKRLKPCLSHVNPEYMVPHGGGRPDFVESAQFRKVLQ 454
>gi|357150158|ref|XP_003575362.1| PREDICTED: auxin response factor 6-like [Brachypodium distachyon]
Length = 915
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 164/329 (49%), Positives = 225/329 (68%), Gaps = 10/329 (3%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQ--NEP 58
EQ+ ASTN+E+ +IP + LP +++C++ N+ + A+ ETDEV AQ+TL P Q +P
Sbjct: 58 EQVSASTNKEIESQIPNYPNLPPQLICQLHNVIMHADAETDEVCAQMTLQPLSPQELKDP 117
Query: 59 TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
P + +P + F K LTASDTSTHGGFSV R+ A + PPLD Q P QEL+A
Sbjct: 118 FLPAELGTANKQPTNY-FCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELMA 176
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
KDLHG EW+F+HIFRGQP+RHLLTTGWS F+++KRLVAGD+ +F+ +N +L +G+R
Sbjct: 177 KDLHGNEWKFRHIFRGQPKRHLLTTGWSVFISAKRLVAGDSVLFIWNDNNQLLLGIRRAN 236
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-N 235
R Q+ MPSSV+SS SMH+G+LA A+HA +T + F ++Y PR S+F+I L KY++AV +
Sbjct: 237 RPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFTIFYNPRASPSEFVIPLAKYVKAVYH 296
Query: 236 NKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPD 294
+ +VGMR++M FE E+S RR+ GT+ G+ D P W +S WRS+KV WDE + R
Sbjct: 297 TRISVGMRFRMLFETEESSVRRYMGTITGISDLDPARWPNSHWRSVKVGWDESTAGERQP 356
Query: 295 RVSPWEIEPFVASATPNLVQPVLAKNKRP 323
RVS WEIEP + P P + KRP
Sbjct: 357 RVSLWEIEPL--TTIPMYSSPFPMRLKRP 383
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 54/87 (62%), Gaps = 3/87 (3%)
Query: 534 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMML 591
KV G AVGR LD+T Y L EL +F ++GQL R+ W++V+ D E D++L
Sbjct: 786 VKVYKSG-AVGRLLDITRFSSYHELRSELGHLFGLEGQLEDPVRSGWQLVFVDRENDVLL 844
Query: 592 VGDDPWHEFCNMVKRIFICSSQDVKKM 618
VGDDPW EF N V I I S Q+V++M
Sbjct: 845 VGDDPWQEFVNSVSCIKILSPQEVQQM 871
>gi|242086258|ref|XP_002443554.1| hypothetical protein SORBIDRAFT_08g021460 [Sorghum bicolor]
gi|241944247|gb|EES17392.1| hypothetical protein SORBIDRAFT_08g021460 [Sorghum bicolor]
Length = 895
Score = 311 bits (797), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 162/310 (52%), Positives = 221/310 (71%), Gaps = 8/310 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP--EPSQNEP 58
EQ+ ASTN+E++ +IP + LP +++C++ N+ + A+ ET+EVYAQ+TL P Q EP
Sbjct: 53 EQVAASTNKEVDAQIPNYPNLPPQLICQLHNVTMHADAETEEVYAQMTLQPLSPEEQKEP 112
Query: 59 TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
P A S +P + F K LTASDTSTHGGFSV R+ A + PPLD +Q P QELVA
Sbjct: 113 FLPIELGAGSKQP-TNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPVQELVA 171
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ +N +L +G+R
Sbjct: 172 RDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSIIFIWNDNNQLLLGIRRAN 231
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-N 235
R Q+ MPSSV+SS SMH+G+LA A+HA AT + F ++Y PR S+F+I L KY++AV +
Sbjct: 232 RPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYH 291
Query: 236 NKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPD 294
+ +VGMR++M FE E+S RR+ GT+ G+ D S W +S WRS+KV WDE + +
Sbjct: 292 TRVSVGMRFRMLFETEESSVRRYMGTITGISDLDSERWPNSHWRSVKVGWDESTAGDKQP 351
Query: 295 RVSPWEIEPF 304
RVS WEIEP
Sbjct: 352 RVSLWEIEPL 361
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 64/107 (59%), Gaps = 4/107 (3%)
Query: 534 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMML 591
KV G ++GR+LD+T Y L ELE +F ++GQL R+ W++V+ D E D++L
Sbjct: 765 VKVYKSG-SLGRSLDITRFSSYYELRSELERLFGLEGQLEDPVRSGWQLVFVDRENDILL 823
Query: 592 VGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGEDILLSS 638
VGDDPW EF N V I I S QDV++M G + S G +L SS
Sbjct: 824 VGDDPWQEFVNSVWCIKILSPQDVQQMVRGGG-DLLSAPGARMLQSS 869
>gi|295844322|gb|ADG43158.1| auxin response factor 24 [Zea mays]
Length = 736
Score = 311 bits (796), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 155/349 (44%), Positives = 222/349 (63%), Gaps = 16/349 (4%)
Query: 21 LPSKILCRVVNIHLMAEQETDEVYAQITLLPE---------PSQNEPTTPDPCPADSPRP 71
LP + CRVV++ L A+ TDEVYAQ+ L+ E + + D ++ +
Sbjct: 98 LPPHVFCRVVDVTLHADASTDEVYAQLALVAENEDVARRLRGRSEDGSAEDGDEGETVKQ 157
Query: 72 KV----HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWR 127
+ H F K LTASDTSTHGGFSV R+ A +C PPLD +Q P+QELVAKDLHG EWR
Sbjct: 158 RFSRMPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWR 217
Query: 128 FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSS 187
F+HI+RGQPRRHLLTTGWS FV K+LV+GD +FLRG+NGEL +GVR A+ ++
Sbjct: 218 FRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDNGELRLGVRRAAQLKNGSAFP 277
Query: 188 VISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRYK 245
+ +Q ++LG L +HAVAT+++F +YY PR SQ FII +K++++ + F+ G R+K
Sbjct: 278 ALYNQCLNLGSLPNVAHAVATKSVFHIYYNPRLSQSEFIIPFSKFIKSFSQPFSAGSRFK 337
Query: 246 MRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 305
+++E +D+ ERR +G + G+ D P W+ SKW+ L V+WD+ +P+R+SPWEIE
Sbjct: 338 VKYESDDASERRCTGIIAGIGDADPMWRGSKWKCLMVRWDDDVDFRQPNRISPWEIE-LT 396
Query: 306 ASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQ 354
+S + + + AK +P L P +P+ + P A AQ H + Q
Sbjct: 397 SSVSGSHMSAPNAKRLKPCLPHVNPDYLVPNGSGRPDFAESAQFHKVLQ 445
>gi|449506738|ref|XP_004162834.1| PREDICTED: auxin response factor 8-like [Cucumis sativus]
Length = 854
Score = 311 bits (796), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 162/309 (52%), Positives = 217/309 (70%), Gaps = 6/309 (1%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ A+TN+E++ IP + LP +++C++ N+ + A ETDEVYAQ+TL P +Q + T
Sbjct: 52 EQVAATTNKEVDGHIPNYPNLPPQLICQLHNVTMHAVVETDEVYAQMTLQPLTAQEQKDT 111
Query: 61 PDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
P P R + F K LTASDTSTHGGFSV R+ A + PPLD +Q P QEL+AK
Sbjct: 112 FLPMELGIPSRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIAK 171
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ E +L +G+R R
Sbjct: 172 DLHDIEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATR 231
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NN 236
Q+ MPSSV+SS SMH+G+LA A+HA AT + F V+Y PR S+F+I L KY++AV +
Sbjct: 232 PQTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFYNPRASPSEFVIPLTKYVKAVFHT 291
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+ +VGMR++M FE E+S RR+ GT+ G+ D P W +S WRS+KV WDE + R R
Sbjct: 292 RVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPR 351
Query: 296 VSPWEIEPF 304
VS WEIEP
Sbjct: 352 VSLWEIEPL 360
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 59/95 (62%), Gaps = 4/95 (4%)
Query: 529 SNRSRTKVQMQGVA-VGRALDLTTLVGYDHLIDELEEMFDIKGQL---HTRTKWEIVYTD 584
SN +RT V++ VGR+LD++ Y L +EL +MF I+GQL R+ W++V+ D
Sbjct: 724 SNPTRTFVKVYKTGSVGRSLDISRFSSYQELREELAQMFGIEGQLVEDPRRSGWQLVFVD 783
Query: 585 DEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
E D++L+GDDPW F N V I I S +D +K+
Sbjct: 784 RENDVLLLGDDPWEAFVNNVGFIKILSPEDFQKLG 818
>gi|413946509|gb|AFW79158.1| hypothetical protein ZEAMMB73_920641 [Zea mays]
Length = 736
Score = 311 bits (796), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 155/349 (44%), Positives = 222/349 (63%), Gaps = 16/349 (4%)
Query: 21 LPSKILCRVVNIHLMAEQETDEVYAQITLLPE---------PSQNEPTTPDPCPADSPRP 71
LP + CRVV++ L A+ TDEVYAQ+ L+ E + + D ++ +
Sbjct: 98 LPPHVFCRVVDVTLHADASTDEVYAQLALVAENEDVARRLRGRSEDGSAEDGDEGETVKQ 157
Query: 72 KV----HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWR 127
+ H F K LTASDTSTHGGFSV R+ A +C PPLD +Q P+QELVAKDLHG EWR
Sbjct: 158 RFSRMPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWR 217
Query: 128 FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSS 187
F+HI+RGQPRRHLLTTGWS FV K+LV+GD +FLRG+NGEL +GVR A+ ++
Sbjct: 218 FRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDNGELRLGVRRAAQLKNGSAFP 277
Query: 188 VISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRYK 245
+ +Q ++LG L +HAVAT+++F +YY PR SQ FII +K++++ + F+ G R+K
Sbjct: 278 ALYNQCLNLGSLPNVAHAVATKSVFHIYYNPRLSQSEFIIPFSKFIKSFSQPFSAGSRFK 337
Query: 246 MRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 305
+++E +D+ ERR +G + G+ D P W+ SKW+ L V+WD+ +P+R+SPWEIE
Sbjct: 338 VKYESDDASERRCTGIIAGIGDADPMWRGSKWKCLMVRWDDDVDFRQPNRISPWEIE-LT 396
Query: 306 ASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQ 354
+S + + + AK +P L P +P+ + P A AQ H + Q
Sbjct: 397 SSVSGSHMSAPNAKRLKPCLPHVNPDYLVPNGSGRPDFAESAQFHKVLQ 445
>gi|115489558|ref|NP_001067266.1| Os12g0613700 [Oryza sativa Japonica Group]
gi|122203162|sp|Q2QM84.1|ARFY_ORYSJ RecName: Full=Auxin response factor 25; AltName: Full=OsARF6b
gi|77556604|gb|ABA99400.1| Auxin response factor 6, putative, expressed [Oryza sativa Japonica
Group]
gi|113649773|dbj|BAF30285.1| Os12g0613700 [Oryza sativa Japonica Group]
gi|125580063|gb|EAZ21209.1| hypothetical protein OsJ_36859 [Oryza sativa Japonica Group]
Length = 899
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 162/310 (52%), Positives = 221/310 (71%), Gaps = 8/310 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP--EPSQNEP 58
EQ+ ASTN+E++ +IP + LP +++C++ N+ + A+ ETDEVYAQ+TL P Q EP
Sbjct: 56 EQVAASTNKEVDAQIPNYPNLPPQLICQLHNVTMHADAETDEVYAQMTLQPLSPEEQKEP 115
Query: 59 TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
P A S +P + F K LTASDTSTHGGFSV R+ A + PPLD +Q P QEL+A
Sbjct: 116 FLPMELGAASKQP-TNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIA 174
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ +N +L +G+R
Sbjct: 175 RDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIWNDNNQLLLGIRRAN 234
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-N 235
RQQ+ MPSSV+SS SMH+G+LA A+HA AT + F ++Y PR S+F+I L KY++AV +
Sbjct: 235 RQQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYH 294
Query: 236 NKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPD 294
+ +VGMR++M FE E+S RR+ GT+ + D S W +S WRS+KV WDE + +
Sbjct: 295 TRVSVGMRFRMLFETEESSVRRYMGTITSISDLDSVRWPNSHWRSVKVGWDESTTGDKQP 354
Query: 295 RVSPWEIEPF 304
RVS WEIEP
Sbjct: 355 RVSLWEIEPL 364
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 64/110 (58%), Gaps = 13/110 (11%)
Query: 534 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMML 591
KV G ++GR+LD++ Y L ELE +F ++GQL R+ W++V+ D E D++L
Sbjct: 769 VKVYKSG-SLGRSLDISRFSSYCELRSELERLFGLEGQLEDPVRSGWQLVFVDRENDILL 827
Query: 592 VGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGEDILLSSDSA 641
VGDDPW EF N V I I S Q+V+++ + G D LLSS A
Sbjct: 828 VGDDPWQEFANSVWCIKILSPQEVQQL----------VRGGDGLLSSPGA 867
>gi|19352043|dbj|BAB85915.1| auxin response factor 6b [Oryza sativa]
Length = 880
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 162/310 (52%), Positives = 221/310 (71%), Gaps = 8/310 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP--EPSQNEP 58
EQ+ ASTN+E++ +IP + LP +++C++ N+ + A+ ETDEVYAQ+TL P Q EP
Sbjct: 37 EQVAASTNKEVDAQIPNYPNLPPQLICQLHNVTMHADAETDEVYAQMTLQPLSPEEQKEP 96
Query: 59 TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
P A S +P + F K LTASDTSTHGGFSV R+ A + PPLD +Q P QEL+A
Sbjct: 97 FLPMELGAASKQP-TNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIA 155
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ +N +L +G+R
Sbjct: 156 RDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIWNDNNQLLLGIRRAN 215
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-N 235
RQQ+ MPSSV+SS SMH+G+LA A+HA AT + F ++Y PR S+F+I L KY++AV +
Sbjct: 216 RQQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYH 275
Query: 236 NKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPD 294
+ +VGMR++M FE E+S RR+ GT+ + D S W +S WRS+KV WDE + +
Sbjct: 276 TRVSVGMRFRMLFETEESSVRRYMGTITSISDLDSVRWPNSHWRSVKVGWDESTTGDKQP 335
Query: 295 RVSPWEIEPF 304
RVS WEIEP
Sbjct: 336 RVSLWEIEPL 345
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 64/110 (58%), Gaps = 13/110 (11%)
Query: 534 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMML 591
KV G ++GR+LD++ Y L ELE +F ++GQL R+ W++V+ D E D++L
Sbjct: 750 VKVYKSG-SLGRSLDISRFSSYCELRSELERLFGLEGQLEDPVRSGWQLVFVDRENDILL 808
Query: 592 VGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGEDILLSSDSA 641
VGDDPW EF N V I I S Q+V+++ + G D LLSS A
Sbjct: 809 VGDDPWQEFANSVWCIKILSPQEVQQL----------VRGGDGLLSSPGA 848
>gi|414868951|tpg|DAA47508.1| TPA: hypothetical protein ZEAMMB73_035781 [Zea mays]
Length = 897
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 161/310 (51%), Positives = 222/310 (71%), Gaps = 8/310 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP--EPSQNEP 58
EQ+ ASTN+E++ +IP + LP +++C++ N+ + A+ ET+EVYAQ+TL P Q +P
Sbjct: 53 EQVAASTNKEVDAQIPNYPNLPPQLICQLHNVTMHADAETEEVYAQMTLQPLSPEEQKDP 112
Query: 59 TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
P A S +P + F K LTASDTSTHGGFSV R+ A + PPLD +Q P QELVA
Sbjct: 113 FLPIELGAGSKQP-TNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPVQELVA 171
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ +N +L +G+R +
Sbjct: 172 RDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSIIFIWNDNNQLLLGIRRAS 231
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-N 235
R Q+ MPSSV+SS SMH+G+LA A+HA AT + F ++Y PR S+F+I L KY++AV +
Sbjct: 232 RPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYH 291
Query: 236 NKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPD 294
+ +VGMR++M FE E+S RR+ GT+ G+ D S W +S WRS+KV WDE + +
Sbjct: 292 TRVSVGMRFRMLFETEESSVRRYMGTITGISDLDSERWPNSHWRSVKVGWDESTAGDKQP 351
Query: 295 RVSPWEIEPF 304
RVS WEIEP
Sbjct: 352 RVSLWEIEPL 361
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 534 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMML 591
KV G ++GR+LD+T Y L ELE +F ++GQL R+ W++V+ D E D++L
Sbjct: 766 VKVYKSG-SLGRSLDITRFGSYYELRVELERLFGLEGQLEDPARSGWQLVFVDRENDVLL 824
Query: 592 VGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGEDILLSS 638
+GDDPW EF N V I I S QD+++M+ G + S G +L S
Sbjct: 825 LGDDPWQEFVNSVGCIKILSPQDLQQMARGGGGDLLSAPGARMLQGS 871
>gi|125537393|gb|EAY83881.1| hypothetical protein OsI_39101 [Oryza sativa Indica Group]
Length = 899
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 162/310 (52%), Positives = 221/310 (71%), Gaps = 8/310 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP--EPSQNEP 58
EQ+ ASTN+E++ +IP + LP +++C++ N+ + A+ ETDEVYAQ+TL P Q EP
Sbjct: 56 EQVAASTNKEVDAQIPNYPNLPPQLICQLHNVTMHADAETDEVYAQMTLQPLSPEEQKEP 115
Query: 59 TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
P A S +P + F K LTASDTSTHGGFSV R+ A + PPLD +Q P QEL+A
Sbjct: 116 FLPMELGAASKQP-TNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIA 174
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ +N +L +G+R
Sbjct: 175 RDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIWNDNNQLLLGIRRAN 234
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-N 235
RQQ+ MPSSV+SS SMH+G+LA A+HA AT + F ++Y PR S+F+I L KY++AV +
Sbjct: 235 RQQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYH 294
Query: 236 NKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPD 294
+ +VGMR++M FE E+S RR+ GT+ + D S W +S WRS+KV WDE + +
Sbjct: 295 TRVSVGMRFRMLFETEESSVRRYMGTITSISDLDSVRWPNSHWRSVKVGWDESTTGDKQP 354
Query: 295 RVSPWEIEPF 304
RVS WEIEP
Sbjct: 355 RVSLWEIEPL 364
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 64/110 (58%), Gaps = 13/110 (11%)
Query: 534 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMML 591
KV G ++GR+LD++ Y L ELE +F ++GQL R+ W++V+ D E D++L
Sbjct: 769 VKVYKSG-SLGRSLDISRFSSYCELRSELERLFGLEGQLEDPVRSGWQLVFVDRENDILL 827
Query: 592 VGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGEDILLSSDSA 641
VGDDPW EF N V I I S Q+V+++ + G D LLSS A
Sbjct: 828 VGDDPWQEFANSVWCIKILSPQEVQQL----------VRGGDGLLSSPGA 867
>gi|402746980|gb|AFQ94050.1| auxin response factor 1 [Camellia sinensis]
Length = 820
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 158/309 (51%), Positives = 218/309 (70%), Gaps = 6/309 (1%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ A+TN+E++ IP + LP +++C++ N+ + A+ ETDEVYAQ+TL P Q + T
Sbjct: 51 EQVAATTNKEVDAHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPQEQKDT 110
Query: 61 PDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
P P + + F K LTASDTSTHGGFSV R+ A + PPLD +Q P QEL+A+
Sbjct: 111 YIPVELGIPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPCQELIAR 170
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ E +L +G+R R
Sbjct: 171 DLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATR 230
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NN 236
Q+ MPSSV+SS SMH+G+LA A+HA +T + F ++Y PR S+F+I L+KY++AV +
Sbjct: 231 PQTVMPSSVLSSDSMHIGLLAAAAHAASTNSCFTIFYNPRASPSEFVIPLSKYIKAVYHT 290
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+ +VGMR++M FE E+S RR+ GT+ G+ D P W +S WRS+KV WDE + R R
Sbjct: 291 RVSVGMRFRMLFETEESSVRRYMGTITGIGDLDPIRWANSHWRSVKVGWDESTAGERQPR 350
Query: 296 VSPWEIEPF 304
VS WEIEP
Sbjct: 351 VSLWEIEPL 359
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 99/202 (49%), Gaps = 23/202 (11%)
Query: 421 AHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLT 480
A+S TP+P K DT +EQ +C L G NHA A + P L
Sbjct: 617 ANSVSLTPYPGK---DTAVEQ----------ENCSLDGQ---NHALFGANID--PGLLLP 658
Query: 481 TEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPK--ESQSKQSCLTSNRSRTKVQM 538
T I T S AD A F+ +Q S + S ++ T+NR+ KV
Sbjct: 659 TTLSSIGTSSVNADVSSMPLGASGFQSSLYGCMQDSSELLHSAAQVDPPTANRTFVKVYK 718
Query: 539 QGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDP 596
G +VGR+LD++ Y+ L +EL +MF I+G L R+ W++V+ D E D++L+GD P
Sbjct: 719 SG-SVGRSLDISRFSSYNELREELGQMFGIEGLLKDPQRSGWQLVFVDREDDVLLLGDGP 777
Query: 597 WHEFCNMVKRIFICSSQDVKKM 618
W F N V I I S +DV K+
Sbjct: 778 WEAFVNNVWYIKILSPEDVLKL 799
>gi|302398563|gb|ADL36576.1| ARF domain class transcription factor [Malus x domestica]
Length = 895
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 166/328 (50%), Positives = 222/328 (67%), Gaps = 8/328 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ ASTN+E++ IP LP +++C++ N+ + A+ ETDEVYAQ+TL P Q +
Sbjct: 51 EQVAASTNKEVDAHIPNHPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLNPQEQKDG 110
Query: 61 PDPCPADSPRPK-VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
P SP + + F K LTASDTSTHGGFSV R+ A + PPLD Q P QEL+A+
Sbjct: 111 YLPAGLGSPNKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELIAR 170
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ E +L +G+R R
Sbjct: 171 DLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANR 230
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNK 237
QQ+ MPSSV+SS SMHLG+LA A+HA AT + F ++Y PR S+F+I L KY++AV +
Sbjct: 231 QQTVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYIKAVYHT 290
Query: 238 -FAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+VGMR++M FE E+S RR+ GT+ G+ D P W +S WRS+KV WDE + R R
Sbjct: 291 CISVGMRFRMLFETEESSVRRYMGTITGISDLDPARWPNSHWRSVKVGWDESTAGERQPR 350
Query: 296 VSPWEIEPFVASATPNLVQPVLAKNKRP 323
VS WE+EP + P P + KRP
Sbjct: 351 VSLWEVEPL--TTFPMYPSPFQLRLKRP 376
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Query: 530 NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEG 587
NR+ KV G + GR+LD+T Y L +EL MF ++G+L R+ W++V+ D E
Sbjct: 761 NRNFVKVYKSG-SFGRSLDITKFSSYQELRNELARMFGLEGKLDDPVRSGWQLVFVDREN 819
Query: 588 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 618
D++L+GDDPW EF N V I I S Q+V++M
Sbjct: 820 DVLLLGDDPWPEFVNSVWCIKILSPQEVQQM 850
>gi|357447187|ref|XP_003593869.1| Auxin response factor [Medicago truncatula]
gi|355482917|gb|AES64120.1| Auxin response factor [Medicago truncatula]
Length = 908
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 165/328 (50%), Positives = 226/328 (68%), Gaps = 8/328 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ STN+E++ IP + LP +++C++ N+ + A+ ETDEVYAQ+TL P +Q +
Sbjct: 51 EQVAVSTNKEVDAHIPNYPSLPPQLICQLHNLTMHADVETDEVYAQMTLQPLNAQEQKEA 110
Query: 61 PDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
P +P + + F K LTASDTSTHGGFSV R+ A + PPLD +Q P QEL+A+
Sbjct: 111 YLPAELGTPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIAR 170
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLHG EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ E +L +G+R +R
Sbjct: 171 DLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASR 230
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NN 236
Q+ MPSSV+SS SMHLG+LA A+HA AT + F ++Y PR S+F+I L KY++AV +
Sbjct: 231 PQTVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRACPSEFVIPLAKYVKAVYHT 290
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDR 295
+ +VGMR++M FE E+S RR+ GT+ G+ D S W +S WRS+KV WDE + R R
Sbjct: 291 RVSVGMRFRMLFETEESSVRRYMGTITGICDLDSVRWPNSHWRSVKVGWDESTAGERQPR 350
Query: 296 VSPWEIEPFVASATPNLVQPVLAKNKRP 323
VS WEIEP + P P + KRP
Sbjct: 351 VSLWEIEPL--TTFPMYPSPFPLRLKRP 376
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 57/91 (62%), Gaps = 3/91 (3%)
Query: 530 NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEG 587
N++ KV G + GR+LD+T Y+ L EL MF ++G+L R+ W++V+ D E
Sbjct: 774 NKTFVKVYKSG-SFGRSLDITKFSSYNELRSELARMFGLEGELEDPVRSGWQLVFVDREN 832
Query: 588 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 618
D++L+GD PW EF N V I I S ++V++M
Sbjct: 833 DVLLLGDGPWPEFVNSVWCIKILSPEEVQQM 863
>gi|356555494|ref|XP_003546066.1| PREDICTED: auxin response factor 6-like [Glycine max]
Length = 897
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 163/310 (52%), Positives = 218/310 (70%), Gaps = 8/310 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP--EPSQNEP 58
EQ+ STN+E++ IP + LP +++C++ N+ + A+ ETDEVYAQ+TL P QNE
Sbjct: 51 EQVAVSTNKEVDAHIPNYPSLPPQLICQLHNMTMHADVETDEVYAQMTLQPLNPQEQNEA 110
Query: 59 TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
P S +P + F K LTASDTSTHGGFSV R+ A + PPLD +Q P QEL+A
Sbjct: 111 YLPAELGTASKQP-TNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIA 169
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
+DLHG EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ E +L +G+R
Sbjct: 170 RDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAN 229
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-N 235
R Q+ MPSSV+SS SMHLG+LA A+HA AT + F ++Y PR S+F+I L KY++AV +
Sbjct: 230 RPQTVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYH 289
Query: 236 NKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPD 294
+ +VGMR++M FE E+S RR+ GT+ G+ D P W +S WRS+KV WDE + R
Sbjct: 290 TRVSVGMRFRMLFETEESSVRRYMGTITGIGDLDPVRWPNSHWRSVKVGWDESTAGERQP 349
Query: 295 RVSPWEIEPF 304
RVS WEIEP
Sbjct: 350 RVSLWEIEPL 359
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 3/91 (3%)
Query: 530 NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEG 587
N++ KV G + GR+LD+T Y L EL MF ++G+L R+ W++V+ D E
Sbjct: 763 NKTFVKVYKSG-SFGRSLDITKFSSYHELRGELARMFGLEGELEDPVRSGWQLVFVDREN 821
Query: 588 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 618
D++L+GD PW EF N V I I S Q+V++M
Sbjct: 822 DVLLLGDGPWPEFVNSVWCIKILSPQEVQQM 852
>gi|255584509|ref|XP_002532983.1| Auxin response factor, putative [Ricinus communis]
gi|223527247|gb|EEF29407.1| Auxin response factor, putative [Ricinus communis]
Length = 478
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 165/328 (50%), Positives = 224/328 (68%), Gaps = 8/328 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ ASTN+E++ IP + LP +++C++ N+ + A+ ETDEVYAQ+TL P Q +
Sbjct: 51 EQVAASTNKEVDAHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPQEQKDA 110
Query: 61 PDPCPADSPRPK-VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
P +P + + F K LTASDTSTHGGFSV R+ A + PPLD +Q P QEL+A+
Sbjct: 111 YLPAELGTPNKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIAR 170
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ E +L +G+R R
Sbjct: 171 DLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANR 230
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NN 236
Q+ MPSSV+SS SMHLG+LA A+HA AT + F ++Y PR S+F+I L KY++AV +
Sbjct: 231 PQTVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHT 290
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+ +VGMR++M FE E+S RR+ GT+ G+ D P W +S WRS+KV WDE + R R
Sbjct: 291 RVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPR 350
Query: 296 VSPWEIEPFVASATPNLVQPVLAKNKRP 323
VS WEIEP + P P + KRP
Sbjct: 351 VSLWEIEPL--TTFPMYPSPFPLRLKRP 376
>gi|381149271|gb|AFF60411.1| auxin response factor 8 [Nicotiana tabacum]
Length = 843
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 159/309 (51%), Positives = 219/309 (70%), Gaps = 6/309 (1%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ A+TN+E++ IP + LP +++C++ N+ + A+ ETDEVYAQ+TL P Q + T
Sbjct: 51 EQVAATTNKEVDAHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTRQEQKDT 110
Query: 61 PDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
P P R + F K LTASDTSTHGGFSV R+ A + PPLD +Q+ P QEL+A+
Sbjct: 111 YLPVELGIPSRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQTPPCQELIAR 170
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ + +L +G+R R
Sbjct: 171 DLHDIEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNKKNQLLLGIRRATR 230
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NN 236
Q+ MPSSV+SS SMH+G+LA A+HA AT + F V++ PR S+F+I L+KY++AV +
Sbjct: 231 PQTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLSKYIKAVYHT 290
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+ +VGMR++M FE E+S RR+ GT+ G+ D P W +S WRS+KV WDE + R R
Sbjct: 291 RVSVGMRFRMLFETEESSVRRYMGTITGIGDLDPVRWANSHWRSVKVGWDESTAGERQPR 350
Query: 296 VSPWEIEPF 304
VS WEIEP
Sbjct: 351 VSLWEIEPL 359
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 57/95 (60%), Gaps = 3/95 (3%)
Query: 527 LTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTD 584
L + R+ KV G +VGR+LD+T Y L EL +MF I+G L R+ W++V+ D
Sbjct: 713 LNATRTFVKVYKSG-SVGRSLDITRFNSYHELRQELGQMFGIEGFLEDPQRSGWQLVFVD 771
Query: 585 DEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
E D++L+GDDPW F N V I I S +DV K+
Sbjct: 772 RENDVLLLGDDPWEAFVNNVWYIKILSPEDVLKLG 806
>gi|224079698|ref|XP_002305917.1| predicted protein [Populus trichocarpa]
gi|222848881|gb|EEE86428.1| predicted protein [Populus trichocarpa]
Length = 827
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 160/309 (51%), Positives = 217/309 (70%), Gaps = 6/309 (1%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ A+TN+E++ IP + LP +++C++ N+ + A+ ETDEVYAQ+TL P Q + T
Sbjct: 50 EQVAATTNKEVDAHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPQEQKET 109
Query: 61 PDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
P P + + F K LTASDTSTHGGFSV R+ A + PPLD Q P QEL+A+
Sbjct: 110 FLPMDLGMPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELIAR 169
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ E +L +G+R R
Sbjct: 170 DLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATR 229
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NN 236
Q+ MPSSV+SS SMH+G+LA A+HA AT + F V+Y PR S+F+I L+KY++AV +
Sbjct: 230 PQTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFYNPRASPSEFVIPLSKYVKAVFHT 289
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+ +VGMR++M FE E+S RR+ GT+ G+ D P W +S WRS+KV WDE + R R
Sbjct: 290 RISVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPR 349
Query: 296 VSPWEIEPF 304
VS WEIEP
Sbjct: 350 VSLWEIEPL 358
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 542 AVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGDMMLVGDDPWHE 599
+VGR+LD++ Y L EL +MF I+G+L R+ W++V+ D E D++L+GDDPW
Sbjct: 728 SVGRSLDISRFSSYHELRGELAQMFGIEGKLENPHRSGWQLVFVDRENDVLLLGDDPWEL 787
Query: 600 FCNMVKRIFICSSQDVKKMS 619
F N V I I S +DV K+
Sbjct: 788 FVNNVWYIKILSPEDVLKLG 807
>gi|291196869|emb|CAX63117.1| ETTIN protein [Amborella trichopoda]
Length = 840
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 159/320 (49%), Positives = 210/320 (65%), Gaps = 16/320 (5%)
Query: 21 LPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPAD---------SPRP 71
LP ++ CRV+N++L A+Q +DEVYAQ++L P P E P+ + S
Sbjct: 68 LPPQVFCRVINVNLHADQVSDEVYAQVSLTPIPEPVEKGLPEEEVREDGEEEFEFVSRSA 127
Query: 72 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 131
H F K LTASDTSTHGGFSV R+ A +C PPLD Q P+QELVAKDLHG+EW+F+HI
Sbjct: 128 TPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGFEWKFRHI 187
Query: 132 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR-QQSSMPSSVIS 190
+RGQPRRHLLTTGWS FV K+LVAGD +FLRGE+GEL +G+R R + S+PS +
Sbjct: 188 YRGQPRRHLLTTGWSVFVNQKKLVAGDAVLFLRGESGELRLGIRRAGRPRGGSVPSLALL 247
Query: 191 SQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRF 248
SQ++ A S AV+T+++F V Y PR S +FI+ KY + N +F++GMR+KM+
Sbjct: 248 SQNLSGSTFAAVSKAVSTKSVFHVSYNPRASPAEFIVPYWKYYKNFNQQFSLGMRFKMKI 307
Query: 249 EGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVAS 307
E ED+ ERR +G + GV D P W SKWR L V+WDE + R DRVSPWEI+ +
Sbjct: 308 ETEDTAERRCTGLISGVGDIDPVRWPGSKWRCLMVRWDEDSGNDRLDRVSPWEID--LLG 365
Query: 308 ATPNLVQPVLAKNKRPRLSM 327
+ P + P KRPR+S+
Sbjct: 366 SVP-VFSPPATGLKRPRISL 384
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 79/201 (39%), Positives = 112/201 (55%), Gaps = 21/201 (10%)
Query: 427 TPHPSKPNNDTLLEQVETGRKTETG---TSCRLFGIELINHATSSAPSEKVPVSSLTTE- 482
P P D ++ G+ T + CRLFG L +E+ P+S+ +
Sbjct: 606 APDVCAPPTDAFRVDIKDGKDGATNARNSCCRLFGFSL---------TEEPPLSNEAMDP 656
Query: 483 GHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCL--TSNRSRTKVQMQG 540
H+ ++S+ D + KS E Q K+S+SK CL T+NRS TKV QG
Sbjct: 657 AHV--SLSSNDDFNSKSSFQPSTWTVSCETQQ---KQSESKSQCLNKTANRSCTKVHKQG 711
Query: 541 VAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHE 599
VGRA++L+ GYD LI ELE +F+++G L+ K W++VYTD + DMMLVGDDPW E
Sbjct: 712 SMVGRAINLSKFEGYDDLISELERLFNMEGLLNDPKKGWQVVYTDSDDDMMLVGDDPWQE 771
Query: 600 FCNMVKRIFICSSQDVKKMSP 620
FCN+V +I I + +V+KM P
Sbjct: 772 FCNIVSKILIYTHDEVEKMIP 792
>gi|291196871|emb|CAX63118.1| ARF4 protein [Amborella trichopoda]
Length = 748
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 170/341 (49%), Positives = 219/341 (64%), Gaps = 24/341 (7%)
Query: 2 EQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQ------ 55
+ L AS E +IP LP ++ CRV+N++L AE ETDEVYAQ+TL+PEP
Sbjct: 51 QALTASHLDEQQVQIPSXHLPPQVFCRVLNVNLHAEPETDEVYAQVTLVPEPEPETESEP 110
Query: 56 ------NEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQ 109
E + +P H F K LTASDTSTHGGFSV R+ A +C PPLD +Q
Sbjct: 111 AEKSLVEEEEGINLLHKSTP----HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQ 166
Query: 110 STPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGE 169
P+QELVAKDLHG EW+F+HI+RGQPRRHLLTTGWS FV + LV+GD +FLRG++GE
Sbjct: 167 QRPSQELVAKDLHGIEWKFRHIYRGQPRRHLLTTGWSLFVNQRNLVSGDAVLFLRGDDGE 226
Query: 170 LHVGVRCLARQQSSMPS-SVISSQ-SMHLGVLATASHAVATQTMFVVYYKPRT--SQFII 225
L +G+R + +S +P+ SV+S Q L VL+ A++A+++++MF ++Y PR S+F+I
Sbjct: 227 LRLGIRRASHPRSIIPTHSVLSGQWGSQLSVLSAAANAISSKSMFHIFYNPRASPSEFVI 286
Query: 226 SLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQW 284
KY+ +N VGMR+KMRFE ED+ ERR SG + G+ D P W DSKWR L V+W
Sbjct: 287 PYRKYVRCINRPVCVGMRFKMRFEMEDAAERRCSGVITGIGDIDPLRWPDSKWRCLMVRW 346
Query: 285 DEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRL 325
DE RVSPWEIEP V P L P L K RP L
Sbjct: 347 DEDIGDEHRVRVSPWEIEPSVLP--PALNVPRL-KKLRPSL 384
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/94 (55%), Positives = 69/94 (73%), Gaps = 1/94 (1%)
Query: 528 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDE 586
S RS TKV G AVGR++DL+ L GY L+ ELE++F+++G LH K W +VYTD+E
Sbjct: 628 ASKRSCTKVHKHGSAVGRSIDLSKLNGYSDLMSELEQIFNMEGLLHDPEKGWRVVYTDNE 687
Query: 587 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 620
DM+LVGDDPW EFC++V +I IC+ DV+ MSP
Sbjct: 688 NDMVLVGDDPWQEFCDVVCKILICTQDDVENMSP 721
>gi|356525110|ref|XP_003531170.1| PREDICTED: auxin response factor 6-like [Glycine max]
Length = 904
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 165/328 (50%), Positives = 224/328 (68%), Gaps = 8/328 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ STN+E++ IP + LP +++C++ N+ + A+ ETDEVYAQ+TL P Q +
Sbjct: 51 EQVAVSTNREVDGHIPNYPSLPPQLICQLHNLTMHADTETDEVYAQMTLQPLNPQEQKGA 110
Query: 61 PDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
P +P + + F K+LTASDTSTHGGFSV R+ A + PPLD +Q P QEL+A+
Sbjct: 111 YLPAELGTPSKQPTNYFCKILTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPCQELIAR 170
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLHG EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ E +L +G+R R
Sbjct: 171 DLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANR 230
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NN 236
Q MPSSV+SS SMHLG+LA A+HA AT + F ++Y PR S+F+I L KY++AV +
Sbjct: 231 PQPVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHT 290
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDR 295
+ +VGMR++M FE E+S RR+ GT+ G+ D S W +S WRS+KV WDE + R R
Sbjct: 291 RVSVGMRFRMLFETEESSVRRYMGTITGISDLDSIRWPNSHWRSVKVGWDESTAGERQPR 350
Query: 296 VSPWEIEPFVASATPNLVQPVLAKNKRP 323
VS WEIEP + P P + KRP
Sbjct: 351 VSLWEIEPL--TTFPMYPSPFPLRLKRP 376
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 57/92 (61%), Gaps = 3/92 (3%)
Query: 529 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDE 586
SN++ KV G + GR+LD+T Y L EL MF ++G+L R+ W++V+ D E
Sbjct: 775 SNKTFVKVYKSG-SFGRSLDITKFTSYPELRSELARMFGLEGELEDPVRSGWQLVFVDQE 833
Query: 587 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 618
D++L+GD PW EF N V I I S Q+V++M
Sbjct: 834 NDVLLLGDGPWPEFVNSVGYIKILSPQEVQQM 865
>gi|302030878|gb|ADK91822.1| auxin response factor 6 [Solanum lycopersicum]
Length = 868
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 168/333 (50%), Positives = 228/333 (68%), Gaps = 17/333 (5%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ ASTN+E+N IP + LP +++C++ N+ + A+ ETDEVYAQ+TL P Q +
Sbjct: 40 EQVAASTNKEINGHIPSYPGLPPQLICQLHNVTMDADVETDEVYAQMTLQPLTPQEQK-- 97
Query: 61 PDPC--PAD----SPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQ 114
D C PA+ S +P + F K LTASDTSTHGGFSV R+ A + PPLD +Q P Q
Sbjct: 98 -DVCLLPAELGTLSKQPSNY-FCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPVQ 155
Query: 115 ELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGV 174
EL+ KDLHG EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ EN +L +G+
Sbjct: 156 ELIGKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIWNENNQLLLGI 215
Query: 175 RCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLE 232
R R Q+ +PSSV+SS SMH+G+LA A+HA AT + F +++ PR S+F+I L KY +
Sbjct: 216 RRANRPQTVLPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFFNPRACPSEFVIPLAKYAK 275
Query: 233 AV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASI 290
AV + + +VGMR++M FE E+S RR+ GT+ G+ D P W +S W+S+KV WDE +
Sbjct: 276 AVYHTRVSVGMRFRMLFETEESSIRRYMGTITGIGDLDPVRWPNSHWQSVKVGWDESTAG 335
Query: 291 TRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 323
R RVS WEIEP + P P + KRP
Sbjct: 336 ERQPRVSLWEIEPL--TTFPMYPSPFSLRLKRP 366
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 54/87 (62%), Gaps = 3/87 (3%)
Query: 542 AVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGDMMLVGDDPWHE 599
+ GR+LD++ Y+ L EL MF ++G L R+ W++V+ D E D++L+GDDPWHE
Sbjct: 744 SFGRSLDISKFSSYNELRSELARMFGLEGLLEDPERSGWQLVFVDRENDVLLLGDDPWHE 803
Query: 600 FCNMVKRIFICSSQDVKKMSP-GSKLP 625
F N V I I S +V++M G LP
Sbjct: 804 FVNSVWYIKILSPLEVQQMGKQGLDLP 830
>gi|259027688|gb|ACV91105.1| putative ARF4 protein [Petunia x hybrida]
Length = 808
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 157/332 (47%), Positives = 212/332 (63%), Gaps = 16/332 (4%)
Query: 16 IPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQN----EPTTPDPCPADSPRP 71
+P F L +I CRV ++ L+A +E DEVY Q++LLP P E + D R
Sbjct: 104 LPTFGLHPQIFCRVDDVQLLANKENDEVYTQLSLLPLPESVAISLEGKEHEDFGIDEERN 163
Query: 72 KV-------HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGY 124
V H F K LTASDTSTHGGFSV R+ A +C PPLD + P+QEL+AKDLHG
Sbjct: 164 GVNPGKSASHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKEQRPSQELIAKDLHGV 223
Query: 125 EWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSM 184
EW+F+HI+RGQPRRHLLTTGWS FV+ K LV+GD +FLRGE G+L +G+R AR ++++
Sbjct: 224 EWKFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGEGGDLRLGIRRAARPRNAL 283
Query: 185 PSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGM 242
P S+I SQ VL+ + AV+T++ F V+Y PR S F++ KY++++ + VG
Sbjct: 284 PESIIKSQYSGSDVLSAVASAVSTKSAFNVFYSPRASHADFVVPYQKYVKSIKTRIPVGT 343
Query: 243 RYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEI 301
R+KMRF+ +DSPERR+SG V G+ D P W +SKWR L V+WDE +RVSPWEI
Sbjct: 344 RFKMRFDLDDSPERRYSGVVTGISDMDPFRWPNSKWRCLMVRWDEDIMNNHQERVSPWEI 403
Query: 302 EPFVASATPNLVQPVLAKNKRPRLSMEVPPLD 333
+ V + P L + K+ R S + P+D
Sbjct: 404 DSSV--SLPPLSIQSSPRLKKLRTSQQAQPVD 433
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 64/103 (62%), Gaps = 1/103 (0%)
Query: 518 KESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK 577
KE + S + RS TKV Q +GR DL+ L G+ L+ ELE + +I+ L K
Sbjct: 667 KEPSAPNSQSSGKRSCTKVHKQRGLIGRPFDLSGLNGHADLLVELERLLNIEDLLSDPKK 726
Query: 578 -WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
W I+YTD + D+M+VG DPWHEFC +V +I I + ++V+KM+
Sbjct: 727 GWRILYTDSDNDLMVVGGDPWHEFCEVVSKIHIYTQEEVEKMT 769
>gi|224114483|ref|XP_002316773.1| predicted protein [Populus trichocarpa]
gi|222859838|gb|EEE97385.1| predicted protein [Populus trichocarpa]
Length = 914
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 160/309 (51%), Positives = 216/309 (69%), Gaps = 6/309 (1%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ ASTN+E++ RIP + LP +++C++ N+ + A+ ETDEVYAQ+TL P Q +
Sbjct: 51 EQVAASTNKEVDARIPNYPSLPPQLICQLHNVTMHADVETDEVYAQLTLQPLSPQEQKDA 110
Query: 61 PDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
P +P + + F K LTASDTSTHGGFSV R+ A + PPLD +Q P QEL+A+
Sbjct: 111 YLPADLGTPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIAR 170
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRL+AGD+ +F+ E +L +G++ R
Sbjct: 171 DLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLIAGDSVLFIWNEKNQLLLGIKRATR 230
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NN 236
Q+ MPSSV+SS SMHLG+LA A+HA AT + F ++Y PR S+FII L KYL+AV
Sbjct: 231 PQTVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFIIPLAKYLKAVYYT 290
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFS-PHWKDSKWRSLKVQWDEPASITRPDR 295
+ +VGMR++M FE E+S RR+ GT+ G+ D W +S WRS+KV WDE + R R
Sbjct: 291 RVSVGMRFRMLFETEESSVRRYMGTITGISDLDVARWPNSLWRSVKVGWDESTAGERQPR 350
Query: 296 VSPWEIEPF 304
VS WEIEP
Sbjct: 351 VSLWEIEPL 359
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 57/91 (62%), Gaps = 3/91 (3%)
Query: 530 NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEG 587
+R+ KV G + GR+LD+T Y+ L EL MF ++GQL R+ W++V+ D E
Sbjct: 777 SRTFVKVYKSG-SFGRSLDITKFSNYNELRSELAFMFGLEGQLEDPLRSGWQLVFIDREN 835
Query: 588 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 618
D++L+GD PW EF N V I I S Q+V++M
Sbjct: 836 DVLLLGDGPWPEFVNSVWCIKILSPQEVQQM 866
>gi|356510873|ref|XP_003524158.1| PREDICTED: auxin response factor 6-like [Glycine max]
Length = 884
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 164/328 (50%), Positives = 223/328 (67%), Gaps = 8/328 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ STN+E++ IP + LP +++C++ N+ + A+ ETDEVYAQ+TL P Q +
Sbjct: 51 EQVAVSTNREVDGHIPNYPSLPPQLICQLHNVTMHADTETDEVYAQMTLQPLNPQEQKEA 110
Query: 61 PDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
P +P + + F K+LTASDTSTHGGFSV R+ A + PPLD +Q P QEL+A+
Sbjct: 111 YLPAELGTPSKQPTNYFCKILTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPCQELIAR 170
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLHG EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ E +L +G+R R
Sbjct: 171 DLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANR 230
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NN 236
Q MPSSV+SS SMHLG+LA A+HA AT + F ++Y PR S+F+I KY++AV +
Sbjct: 231 PQPVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPFAKYVKAVYHT 290
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDR 295
+ +VGMR++M FE E+S RR+ GT+ G+ D S W +S WRS+KV WDE + R R
Sbjct: 291 RVSVGMRFRMLFETEESSVRRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPR 350
Query: 296 VSPWEIEPFVASATPNLVQPVLAKNKRP 323
VS WEIEP + P P + KRP
Sbjct: 351 VSLWEIEPL--TTFPMYPSPFPLRLKRP 376
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 57/92 (61%), Gaps = 3/92 (3%)
Query: 529 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDE 586
+N++ KV G + GR+LD+T Y L EL MF ++G+L R+ W++V+ D E
Sbjct: 749 TNKTFVKVYKSG-SFGRSLDITKFTSYPELRSELARMFGLEGELEDPVRSGWQLVFVDQE 807
Query: 587 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 618
D++L+GD PW EF N V I I S Q+V++M
Sbjct: 808 NDVLLLGDGPWPEFVNSVGCIKILSPQEVQQM 839
>gi|350539495|ref|NP_001234663.1| auxin response factor 6 [Solanum lycopersicum]
gi|294652034|gb|ACU30063.2| auxin response factor 6 [Solanum lycopersicum]
Length = 881
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 168/333 (50%), Positives = 228/333 (68%), Gaps = 17/333 (5%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ ASTN+E+N IP + LP +++C++ N+ + A+ ETDEVYAQ+TL P Q +
Sbjct: 53 EQVAASTNKEINGHIPSYPGLPPQLICQLHNVTMDADVETDEVYAQMTLQPLTPQEQK-- 110
Query: 61 PDPC--PAD----SPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQ 114
D C PA+ S +P + F K LTASDTSTHGGFSV R+ A + PPLD +Q P Q
Sbjct: 111 -DVCLLPAELGTLSKQPSNY-FCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPVQ 168
Query: 115 ELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGV 174
EL+ KDLHG EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ EN +L +G+
Sbjct: 169 ELIGKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIWNENNQLLLGI 228
Query: 175 RCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLE 232
R R Q+ +PSSV+SS SMH+G+LA A+HA AT + F +++ PR S+F+I L KY +
Sbjct: 229 RRANRPQTVLPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFFNPRACPSEFVIPLAKYAK 288
Query: 233 AV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASI 290
AV + + +VGMR++M FE E+S RR+ GT+ G+ D P W +S W+S+KV WDE +
Sbjct: 289 AVYHTRVSVGMRFQMLFETEESSIRRYMGTITGIGDLDPVRWPNSHWQSVKVGWDESTAG 348
Query: 291 TRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 323
R RVS WEIEP + P P + KRP
Sbjct: 349 ERQPRVSLWEIEPL--TTFPMYPSPFSLRLKRP 379
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 54/87 (62%), Gaps = 3/87 (3%)
Query: 542 AVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHE 599
+ GR+LD++ Y+ L EL MF ++G L R+ W++V+ D E D++L+GDDPWHE
Sbjct: 757 SFGRSLDISKFSSYNELRSELARMFGLEGLLEDPERSGWQLVFVDRENDVLLLGDDPWHE 816
Query: 600 FCNMVKRIFICSSQDVKKMSP-GSKLP 625
F N V I I S +V++M G LP
Sbjct: 817 FVNSVWYIKILSPLEVQQMGKQGLDLP 843
>gi|449466121|ref|XP_004150775.1| PREDICTED: auxin response factor 6-like [Cucumis sativus]
Length = 899
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 164/328 (50%), Positives = 225/328 (68%), Gaps = 8/328 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ ASTN+E++ +IP + LP +++C++ N+ + A+ ETDEVYAQ+TL P +Q
Sbjct: 51 EQVAASTNREVDAQIPNYPSLPPQLICQLHNLTMHADAETDEVYAQMTLQPLSAQELKEA 110
Query: 61 PDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
P +P R + F K LTASDTSTHGGFSV R+ A + PPLD + P QEL+A+
Sbjct: 111 YLPAELGTPSRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSMQPPAQELIAR 170
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD +F+ E +L +G+R +R
Sbjct: 171 DLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDAVLFIWNEKNQLLLGIRRASR 230
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NN 236
Q+ MPSSV+SS SMHLG+LA A+HA AT + F +++ PR S+F+I L KY++AV +
Sbjct: 231 PQTVMPSSVLSSDSMHLGLLAAAAHAAATISRFTIFFNPRASPSEFVIPLAKYVKAVYHT 290
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+ +VGMR++M FE E+S RR+ GT+ G+ D P W++S WRS+KV WDE + R R
Sbjct: 291 RVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWQNSHWRSVKVGWDESTAGERQPR 350
Query: 296 VSPWEIEPFVASATPNLVQPVLAKNKRP 323
VS WEIEP + P P + KRP
Sbjct: 351 VSLWEIEPL--TTFPMYPSPFPLRLKRP 376
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 530 NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEG 587
N + KV G R+LD+T Y L EL MF ++G+L R+ W++V+ D E
Sbjct: 765 NGTFVKVHKSGT-YSRSLDITKFNSYPELRSELARMFGLEGELEDPLRSGWQLVFVDREN 823
Query: 588 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 618
D++L+GD PW EF N V I I S ++V+ M
Sbjct: 824 DVLLLGDGPWPEFVNSVWCIKILSPEEVQDM 854
>gi|255570473|ref|XP_002526195.1| Auxin response factor, putative [Ricinus communis]
gi|223534499|gb|EEF36199.1| Auxin response factor, putative [Ricinus communis]
Length = 826
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 159/309 (51%), Positives = 218/309 (70%), Gaps = 6/309 (1%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ A+TN+E++ IP + LP +++C++ N+ + A+ ETDEVYAQ+TL P Q + T
Sbjct: 51 EQVAATTNKEVDGHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPQEQKDT 110
Query: 61 PDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
P P + + F K LTASDTSTHGGFSV R+ A + PPLD +Q P QEL+A+
Sbjct: 111 FLPMELGMPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIAR 170
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ E +L +G+R R
Sbjct: 171 DLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATR 230
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NN 236
Q+ MPSSV+SS SMH+G+LA A+HA AT + F ++Y PR S+F+I L+KY++AV +
Sbjct: 231 PQTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTIFYNPRASPSEFVIPLSKYVKAVFHT 290
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+ +VGMR++M FE E+S RR+ GT+ G+ D P W +S WRS+KV WDE + R R
Sbjct: 291 RVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPR 350
Query: 296 VSPWEIEPF 304
VS WEIEP
Sbjct: 351 VSLWEIEPL 359
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 73/140 (52%), Gaps = 9/140 (6%)
Query: 486 ISTISAAADSD----GKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGV 541
ST S AD G S Q+ ++ P Q L+ R+ KV G
Sbjct: 678 FSTSSVDADVSSMPIGDSGFQSSIYGGVQDSSELLPSAGQVDPPTLS--RTFVKVYKLG- 734
Query: 542 AVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGDMMLVGDDPWHE 599
+VGR+LD++ Y L +EL +MF I+G+L R+ W++V+ D E D++L+GDDPW
Sbjct: 735 SVGRSLDISRFSSYHELREELAQMFGIEGKLENPHRSGWQLVFVDRENDVLLLGDDPWEA 794
Query: 600 FCNMVKRIFICSSQDVKKMS 619
F N V I I S +DV+KM
Sbjct: 795 FVNNVWYIKILSPEDVQKMG 814
>gi|300373056|gb|ADG43143.1| auxin response factor 9 [Zea mays]
Length = 881
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 162/312 (51%), Positives = 221/312 (70%), Gaps = 8/312 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP--EPSQNEP 58
EQ+ ASTN+E++ +IP + LP +++C++ N+ + A+ ET EVYAQ+TL P Q EP
Sbjct: 46 EQVAASTNKEVDAQIPNYPNLPPQLICQLHNVTMHADAETGEVYAQMTLQPLSPEEQKEP 105
Query: 59 TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
P A S +P + F K LTASDTSTHGGFSV R+ A + PPLD +Q P QELVA
Sbjct: 106 FLPIELGAGSNQPTNY-FCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQHPPVQELVA 164
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ +N +L +G+R
Sbjct: 165 RDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSIIFIWNDNNQLLLGIRRAN 224
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-N 235
R Q+ MPSSV+SS SMH+G+LA A+HA AT + F ++Y PR S+F+I L KY++AV +
Sbjct: 225 RPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYH 284
Query: 236 NKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPD 294
+ +VGMR++M FE E+S RR+ GT+ + D S W +S WRS+KV WDE + +
Sbjct: 285 TRVSVGMRFRMLFETEESSVRRYMGTITCISDLDSERWPNSHWRSVKVGWDESTAGDKQP 344
Query: 295 RVSPWEIEPFVA 306
RVS WEIEP +A
Sbjct: 345 RVSLWEIEPLMA 356
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
Query: 544 GRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEFC 601
GR+LD+T Y L ELE +F ++GQL R+ W++V+ D E D++LVGDDPW EF
Sbjct: 760 GRSLDITRFSSYYELRSELERLFGLEGQLEDPVRSGWQLVFVDRENDILLVGDDPWQEFV 819
Query: 602 NMVKRIFICSSQDVKKMSPGS 622
N V I I S QDV++M G
Sbjct: 820 NSVWCIKILSPQDVQQMVRGG 840
>gi|291196873|emb|CAX63120.1| ARF4 protein [Amborella trichopoda]
Length = 638
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 170/341 (49%), Positives = 219/341 (64%), Gaps = 24/341 (7%)
Query: 2 EQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQ------ 55
+ L AS E +IP LP ++ CRV+N++L AE ETDEVYAQ+TL+PEP
Sbjct: 51 QALTASHLDEQQVQIPSXHLPPQVFCRVLNVNLHAEPETDEVYAQVTLVPEPEPETESEP 110
Query: 56 ------NEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQ 109
E + +P H F K LTASDTSTHGGFSV R+ A +C PPLD +Q
Sbjct: 111 AEKSLVEEEEGINLLHKSTP----HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQ 166
Query: 110 STPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGE 169
P+QELVAKDLHG EW+F+HI+RGQPRRHLLTTGWS FV + LV+GD +FLRG++GE
Sbjct: 167 QRPSQELVAKDLHGIEWKFRHIYRGQPRRHLLTTGWSLFVNQRNLVSGDAVLFLRGDDGE 226
Query: 170 LHVGVRCLARQQSSMPS-SVISSQ-SMHLGVLATASHAVATQTMFVVYYKPRT--SQFII 225
L +G+R + +S +P+ SV+S Q L VL+ A++A+++++MF ++Y PR S+F+I
Sbjct: 227 LRLGIRRASHPRSIIPTHSVLSGQWGSQLSVLSAAANAISSKSMFHIFYNPRASPSEFVI 286
Query: 226 SLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQW 284
KY+ +N VGMR+KMRFE ED+ ERR SG + G+ D P W DSKWR L V+W
Sbjct: 287 PYRKYVRCINRPVCVGMRFKMRFEMEDAAERRCSGVITGIGDIDPLRWPDSKWRCLMVRW 346
Query: 285 DEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRL 325
DE RVSPWEIEP V P L P L K RP L
Sbjct: 347 DEDIGDEHRVRVSPWEIEPSVLP--PALNVPRL-KKLRPSL 384
>gi|225443952|ref|XP_002279808.1| PREDICTED: auxin response factor 6-like [Vitis vinifera]
Length = 908
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 165/328 (50%), Positives = 222/328 (67%), Gaps = 8/328 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ ASTN+E++ IP + LP +++C++ N+ + A+ ETDEVYAQ+TL P Q +
Sbjct: 51 EQVAASTNKEVDAHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPQEQKDA 110
Query: 61 PDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
P P + + F K LTASDTSTHGGFSV R+ A + PPLD +Q P QEL+A+
Sbjct: 111 YLPAELGVPSKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIAR 170
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ E +L +G+R R
Sbjct: 171 DLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANR 230
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NN 236
Q+ MPSSV+SS SMHLG+LA A+HA AT + F ++Y PR S+F+I L KY +AV +
Sbjct: 231 PQTVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYAKAVYHT 290
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+ +VGMR++M FE E+S RR+ GT+ G+ D P W +S WRS+KV WDE + R R
Sbjct: 291 RVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPR 350
Query: 296 VSPWEIEPFVASATPNLVQPVLAKNKRP 323
VS WEIEP + P P + KRP
Sbjct: 351 VSLWEIEPL--TTFPMYPSPFPLRLKRP 376
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 56/90 (62%), Gaps = 3/90 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 588
R+ KV G + GR+LD+T Y L EL MF ++GQL R+ W++V+ D E D
Sbjct: 775 RTFVKVYKSG-SFGRSLDITKFSSYHELRGELARMFGLEGQLEDPRRSGWQLVFVDREND 833
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKM 618
++L+GDDPW EF N V I I S Q+V++M
Sbjct: 834 VLLLGDDPWPEFVNSVWCIKILSLQEVQQM 863
>gi|226501654|ref|NP_001146279.1| uncharacterized protein LOC100279854 [Zea mays]
gi|219886495|gb|ACL53622.1| unknown [Zea mays]
gi|407232696|gb|AFT82690.1| ARF9 ARF type transcription factor, partial [Zea mays subsp. mays]
gi|414878010|tpg|DAA55141.1| TPA: hypothetical protein ZEAMMB73_057592 [Zea mays]
Length = 888
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 162/312 (51%), Positives = 221/312 (70%), Gaps = 8/312 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP--EPSQNEP 58
EQ+ ASTN+E++ +IP + LP +++C++ N+ + A+ ET EVYAQ+TL P Q EP
Sbjct: 53 EQVAASTNKEVDAQIPNYPNLPPQLICQLHNVTMHADAETGEVYAQMTLQPLSPEEQKEP 112
Query: 59 TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
P A S +P + F K LTASDTSTHGGFSV R+ A + PPLD +Q P QELVA
Sbjct: 113 FLPIELGAGSNQPTNY-FCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQHPPVQELVA 171
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ +N +L +G+R
Sbjct: 172 RDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSIIFIWNDNNQLLLGIRRAN 231
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-N 235
R Q+ MPSSV+SS SMH+G+LA A+HA AT + F ++Y PR S+F+I L KY++AV +
Sbjct: 232 RPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYH 291
Query: 236 NKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPD 294
+ +VGMR++M FE E+S RR+ GT+ + D S W +S WRS+KV WDE + +
Sbjct: 292 TRVSVGMRFRMLFETEESSVRRYMGTITCISDLDSERWPNSHWRSVKVGWDESTAGDKQP 351
Query: 295 RVSPWEIEPFVA 306
RVS WEIEP +A
Sbjct: 352 RVSLWEIEPLMA 363
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
Query: 544 GRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEFC 601
GR+LD+T Y L ELE +F ++GQL R+ W++V+ D E D++LVGDDPW EF
Sbjct: 767 GRSLDITRFSSYYELRSELERLFGLEGQLEDPVRSGWQLVFVDRENDILLVGDDPWQEFV 826
Query: 602 NMVKRIFICSSQDVKKMSPGS 622
N V I I S QDV++M G
Sbjct: 827 NSVWCIKILSPQDVQQMVRGG 847
>gi|356500980|ref|XP_003519308.1| PREDICTED: auxin response factor 8-like [Glycine max]
Length = 846
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 160/309 (51%), Positives = 218/309 (70%), Gaps = 6/309 (1%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ A+TN+E++ IP + LP +++C++ N+ + A+ ETDEVYAQ+TL P Q + T
Sbjct: 51 EQVAATTNREVDGHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPQEQKDT 110
Query: 61 PDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
P P + + F K LTASDTSTHGGFSV R+ A + PPLD +Q P QEL+A+
Sbjct: 111 FLPMELGVPSKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIAR 170
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ E +L +G+R R
Sbjct: 171 DLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANR 230
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NN 236
Q+ MPSSV+SS SMH+G+LA A+HA AT + F V+Y PR S+F+I L+KY++AV +
Sbjct: 231 PQTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFYNPRASPSEFVIPLSKYIKAVYHT 290
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+ +VGMR++M FE E+S RR+ GT+ G+ D P W +S WRS+KV WDE + R R
Sbjct: 291 RVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPR 350
Query: 296 VSPWEIEPF 304
VS WEIEP
Sbjct: 351 VSLWEIEPL 359
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 82/150 (54%), Gaps = 15/150 (10%)
Query: 490 SAAADSDGKSDIAKE--FKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQM-QGVAVGRA 546
+A+ADSD + E F+ Q S + QS N++RT V++ + +VGR+
Sbjct: 675 TASADSDASAMPLGESGFQSPLYPCGQDSSELVQSAGQVDPQNQTRTFVKVYKSGSVGRS 734
Query: 547 LDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEFCNMV 604
LD++ Y L +EL +MF I+G+L R+ W++V+ D E D++L+GDDPW F N V
Sbjct: 735 LDISRFSSYHELREELAQMFGIEGKLEDPLRSGWQLVFVDRENDVLLLGDDPWESFVNNV 794
Query: 605 KRIFICSSQDVKKM----------SPGSKL 624
I I S +D+ KM SPG +L
Sbjct: 795 WYIKILSPEDIHKMGEQALESLGPSPGQRL 824
>gi|356539752|ref|XP_003538358.1| PREDICTED: auxin response factor 8-like [Glycine max]
Length = 843
Score = 308 bits (789), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 161/309 (52%), Positives = 218/309 (70%), Gaps = 6/309 (1%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ A+TN+E++ IP + LP +++C++ NI + A+ ETDEVYAQ+TL P Q + T
Sbjct: 51 EQVAATTNREIDGHIPNYPSLPPQLICQLHNITMHADVETDEVYAQMTLQPLTPQEQKDT 110
Query: 61 PDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
P P + + F K LTASDTSTHGGFSV R+ A + PPLD +Q P QEL+A+
Sbjct: 111 FLPMELGIPSKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIAR 170
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ E +L +G+R R
Sbjct: 171 DLHDVEWKFRHIFRGQPKRHLLTTGWSIFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANR 230
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NN 236
Q+ MPSSV+SS SMH+G+LA A+HA AT + F V+Y PR S+F+I L+KY++AV +
Sbjct: 231 PQTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFYNPRASPSEFVIPLSKYIKAVYHT 290
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDR 295
+ +VGMR++M FE E+S RR+ GT+ G+ D S W +S WRS+KV WDE + R R
Sbjct: 291 RISVGMRFRMLFETEESSVRRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPR 350
Query: 296 VSPWEIEPF 304
VS WEIEP
Sbjct: 351 VSLWEIEPL 359
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 62/93 (66%), Gaps = 3/93 (3%)
Query: 530 NRSRTKVQM-QGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDE 586
N+++T V++ + +VGR+LD++ Y L +EL +MF I+G+L R+ W++V+ D E
Sbjct: 714 NQTQTFVKVYKSGSVGRSLDISRFSSYHELREELAQMFGIEGKLEDPLRSGWQLVFVDRE 773
Query: 587 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
D++L+GDDPW F N V I I S +D++KM
Sbjct: 774 NDVLLLGDDPWESFVNNVWYIKILSPEDIQKMG 806
>gi|414878009|tpg|DAA55140.1| TPA: hypothetical protein ZEAMMB73_057592 [Zea mays]
Length = 781
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 162/312 (51%), Positives = 221/312 (70%), Gaps = 8/312 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP--EPSQNEP 58
EQ+ ASTN+E++ +IP + LP +++C++ N+ + A+ ET EVYAQ+TL P Q EP
Sbjct: 53 EQVAASTNKEVDAQIPNYPNLPPQLICQLHNVTMHADAETGEVYAQMTLQPLSPEEQKEP 112
Query: 59 TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
P A S +P + F K LTASDTSTHGGFSV R+ A + PPLD +Q P QELVA
Sbjct: 113 FLPIELGAGSNQPTNY-FCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQHPPVQELVA 171
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ +N +L +G+R
Sbjct: 172 RDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSIIFIWNDNNQLLLGIRRAN 231
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-N 235
R Q+ MPSSV+SS SMH+G+LA A+HA AT + F ++Y PR S+F+I L KY++AV +
Sbjct: 232 RPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYH 291
Query: 236 NKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPD 294
+ +VGMR++M FE E+S RR+ GT+ + D S W +S WRS+KV WDE + +
Sbjct: 292 TRVSVGMRFRMLFETEESSVRRYMGTITCISDLDSERWPNSHWRSVKVGWDESTAGDKQP 351
Query: 295 RVSPWEIEPFVA 306
RVS WEIEP +A
Sbjct: 352 RVSLWEIEPLMA 363
>gi|350537149|ref|NP_001233771.1| auxin response factor 4 [Solanum lycopersicum]
gi|85069287|gb|ABC69715.1| auxin response factor 4 [Solanum lycopersicum]
Length = 811
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 151/324 (46%), Positives = 208/324 (64%), Gaps = 21/324 (6%)
Query: 16 IPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPS-----------QNEPTTPDPC 64
+P F L +I CRV ++ L+A +E DEVY Q+TLLP P ++ T +
Sbjct: 105 LPTFGLQPQIFCRVEDVQLLANKENDEVYTQLTLLPLPESMAISLEGKEHEDSGTDEEGN 164
Query: 65 PADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGY 124
+ + H F K LTASDT+THGGFSV R+ A +C PPLD + P+QEL+AKDLHG
Sbjct: 165 GVNPGKSASHMFCKTLTASDTTTHGGFSVPRRAAEDCFPPLDYKEQRPSQELIAKDLHGV 224
Query: 125 EWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSM 184
EW+F+HI+RGQPRRHLLTTGWS FV+ K LV+GD +FLRGE G L +G+R AR ++ +
Sbjct: 225 EWKFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGEGGNLRLGIRRAARPRNGL 284
Query: 185 PSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGM 242
P S+I SQ VL++ + A++ ++ F V+Y PR S F++ KY++A+N++ VG
Sbjct: 285 PESIIKSQYSGPDVLSSVATALSAKSTFHVFYSPRASHADFVVPYQKYVKAINSRIPVGT 344
Query: 243 RYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEI 301
R+KM+F+ +DSPERR+SG V G+ D P W +SKWR L V+WDE +RVSPWEI
Sbjct: 345 RFKMKFDLDDSPERRYSGVVTGISDMDPFRWPNSKWRCLMVRWDEDIMSNHQERVSPWEI 404
Query: 302 EPFVASATPNLVQPVLAKNKRPRL 325
+ V+ P L+ PRL
Sbjct: 405 DSSVS-------LPPLSIQSSPRL 421
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/103 (50%), Positives = 70/103 (67%), Gaps = 1/103 (0%)
Query: 518 KESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK 577
KE + S + RS TKV QG VGRA+DL+ L GYD L+ ELE +F+++ L K
Sbjct: 670 KEPSTPSSQSSGKRSCTKVHKQGSLVGRAIDLSRLNGYDDLLVELERLFNMEDLLRDPNK 729
Query: 578 -WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
W I+YTD E DMM+VGDDPWHEFC +V +I I + ++V+KM+
Sbjct: 730 GWRILYTDSENDMMVVGDDPWHEFCEVVSKIHIYTQEEVEKMT 772
>gi|359476473|ref|XP_002266678.2| PREDICTED: auxin response factor 8-like [Vitis vinifera]
Length = 846
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 159/310 (51%), Positives = 218/310 (70%), Gaps = 6/310 (1%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ A+TN+E++ IP + LP +++C++ N+ + A+ ETDEVYAQ+TL P Q + T
Sbjct: 52 EQVAATTNKEVDGHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPQEQKDT 111
Query: 61 PDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
P P + + F K LTASDTSTHGGFSV R+ A + PPLD +Q P QEL+A+
Sbjct: 112 FLPVELGIPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIAR 171
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ E +L +G+R R
Sbjct: 172 DLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATR 231
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NN 236
Q+ MPSSV+SS SMH+G+LA A+HA AT + F ++Y PR S+F+I L+KY++AV +
Sbjct: 232 PQTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTIFYNPRASPSEFVIPLSKYVKAVFHT 291
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+ +VGMR++M FE E+S RR+ GT+ G+ D P W +S WRS+KV WDE + R R
Sbjct: 292 RVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPR 351
Query: 296 VSPWEIEPFV 305
VS WEIEP
Sbjct: 352 VSLWEIEPLT 361
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 60/94 (63%), Gaps = 3/94 (3%)
Query: 528 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDD 585
T +R+ KV G +VGR+LD+T Y L +EL +MF I+G+L R+ W++V+ D
Sbjct: 716 TPSRTFVKVYKSG-SVGRSLDITRFSSYHELREELGQMFGIEGKLENPLRSGWQLVFVDR 774
Query: 586 EGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
E D++L+GDDPW F N V I I S +DV+KM
Sbjct: 775 ENDVLLLGDDPWEAFVNNVWYIKILSPEDVQKMG 808
>gi|356553218|ref|XP_003544955.1| PREDICTED: auxin response factor 8-like [Glycine max]
Length = 842
Score = 308 bits (788), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 160/309 (51%), Positives = 218/309 (70%), Gaps = 6/309 (1%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ A+TN+E++ IP + LP +++C++ N+ + A+ ETDEVYAQ+TL P Q + T
Sbjct: 51 EQVAATTNREVDGHIPNYPSLPPQLVCQLHNVTMHADVETDEVYAQMTLQPLTPQEQKDT 110
Query: 61 PDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
P P + + F K LTASDTSTHGGFSV R+ A + PPLD +Q P QEL+A+
Sbjct: 111 FLPMELGVPSKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIAR 170
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ E +L +G+R R
Sbjct: 171 DLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANR 230
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NN 236
Q+ MPSSV+SS SMH+G+LA A+HA AT + F V+Y PR S+F+I L+KY++AV +
Sbjct: 231 PQTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFYNPRASPSEFVIPLSKYIKAVYHT 290
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+ +VGMR++M FE E+S RR+ GT+ G+ D P W +S WRS+KV WDE + R R
Sbjct: 291 RVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPR 350
Query: 296 VSPWEIEPF 304
VS WEIEP
Sbjct: 351 VSLWEIEPL 359
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 75/136 (55%), Gaps = 3/136 (2%)
Query: 487 STISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQM-QGVAVGR 545
+T SA D+ F+ VQ S + QS N++RT V++ + +VGR
Sbjct: 670 TTASAEIDASAMPIGESGFQSPLYPCVQDSSELVQSAGQVDPQNQTRTFVKVYKSGSVGR 729
Query: 546 ALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEFCNM 603
+LD++ Y L +EL +MF I+G+L R+ W++V+ D E D++L+GDDPW F N
Sbjct: 730 SLDISRFSSYHELREELAQMFGIEGKLEDPLRSGWQLVFVDRENDVLLLGDDPWESFVNN 789
Query: 604 VKRIFICSSQDVKKMS 619
V I I S +D+ KM
Sbjct: 790 VWYIKILSPEDIHKMG 805
>gi|255562988|ref|XP_002522498.1| Auxin response factor, putative [Ricinus communis]
gi|223538189|gb|EEF39798.1| Auxin response factor, putative [Ricinus communis]
Length = 730
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 155/338 (45%), Positives = 211/338 (62%), Gaps = 14/338 (4%)
Query: 16 IPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDP-----CPADSPR 70
+ ++ LPS I CRVV++ L AE DEVYAQ++L+P+ Q E C +
Sbjct: 88 LAVYDLPSYIFCRVVDVKLHAETANDEVYAQVSLVPDSEQIEQKLKQGKLEGHCEEEDVE 147
Query: 71 PKV-----HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYE 125
V H F K LTASDTSTHGGFSV R+ A +C PPLD +Q P+QELVAKDLHG+E
Sbjct: 148 AVVKSTTTHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGFE 207
Query: 126 WRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMP 185
W+F+HI+RGQPRRHLLTTGWS FV K+LV+GD +FLRG++GEL +G+R A+ +
Sbjct: 208 WKFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGIRRAAQVKCGAS 267
Query: 186 SSVISSQSMHLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMR 243
+ SQ ++ L HA++ +++F + Y PR +S+FII L+K+L++++ F+VGMR
Sbjct: 268 FPALCSQQLNQSTLTDVVHAMSMRSLFNICYNPRASSSEFIIPLHKFLKSLDYSFSVGMR 327
Query: 244 YKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 302
+KMRFE ED+ ERR+ G + G+ D P W SKWR L V+WD+ R RVSPWEIE
Sbjct: 328 FKMRFETEDAAERRYMGLITGISDLDPARWPGSKWRCLVVRWDD-METNRHSRVSPWEIE 386
Query: 303 PFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASA 340
P + ++ N K R P +P A
Sbjct: 387 PSGSVSSCNSFMTPGLKRSRSGFPSSKPEFPVPDGIGA 424
>gi|356501413|ref|XP_003519519.1| PREDICTED: auxin response factor 6-like [Glycine max]
Length = 896
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 164/329 (49%), Positives = 224/329 (68%), Gaps = 9/329 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQNEPT 59
EQ+ ASTN+E++ IP + LP +++C++ N+ + A+ ETDEVYAQ+TL P P + +
Sbjct: 52 EQVAASTNREVDAHIPNYPNLPPQLICQLHNVTMHADAETDEVYAQMTLQPLSPQEQKEV 111
Query: 60 TPDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
P +P + + F K LTASDTSTHGGFSV R+ A + PPLD +Q P QEL+A
Sbjct: 112 YLLPAELGTPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELIA 171
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ E +L +G+R
Sbjct: 172 RDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAN 231
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-N 235
R Q+ MPSSV+SS SMH+G+LA A+HA AT + F ++Y PR S+F I L KY++AV +
Sbjct: 232 RPQTIMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFAIPLAKYVKAVYH 291
Query: 236 NKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPD 294
+ +VGMR++M FE E+S RR+ GT+ G+ D P W +S WRS+KV WDE + R
Sbjct: 292 TRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQP 351
Query: 295 RVSPWEIEPFVASATPNLVQPVLAKNKRP 323
RVS WEIEP + P P + KRP
Sbjct: 352 RVSLWEIEPL--TTFPMYPSPFPLRLKRP 378
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 60/104 (57%), Gaps = 14/104 (13%)
Query: 534 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH----TRTKWEIVYTDDEGDM 589
KV G + GR+LD++ YD LI EL MF ++GQL R+ W++V+ D E D+
Sbjct: 763 VKVHKSG-SFGRSLDISKFSSYDELISELARMFGLEGQLEDPKTQRSGWQLVFVDRENDV 821
Query: 590 MLVGDDPWHEFCNMVKRIFICSSQDVKKM---------SPGSKL 624
+L+GDDPW EF N V I I S +V++M +PG KL
Sbjct: 822 LLLGDDPWQEFVNNVWYIKILSPLEVQQMGKVLSPSTSAPGDKL 865
>gi|168023081|ref|XP_001764067.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684806|gb|EDQ71206.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 875
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 167/329 (50%), Positives = 221/329 (67%), Gaps = 11/329 (3%)
Query: 4 LEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPE-PSQNEPTTP 61
+ AST +E + IP + LPS+++C + N+ L A+ ETDEVYAQ+TL+P P+ +
Sbjct: 42 VAASTQKEADAHIPNYPNLPSRLVCLLDNVTLHADLETDEVYAQMTLIPVLPANEKEALI 101
Query: 62 DPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDL 121
P R F K LTASDTSTHGGFS+ R+ A + PPLD Q+ P QEL A+DL
Sbjct: 102 SPDIGMRSRQPTEYFCKTLTASDTSTHGGFSIPRRAAEKVFPPLDYTQTPPAQELKARDL 161
Query: 122 HGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQ 181
H EW F+HI+RGQPRRHLLTTGWS FV++KRL AGD +F+R + G+L +G+R RQQ
Sbjct: 162 HDQEWHFRHIYRGQPRRHLLTTGWSVFVSAKRLQAGDAVLFIRDDKGQLQLGIRRQNRQQ 221
Query: 182 SSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNN-KF 238
+ MPSSV+SS SMH+GVLA A+HA AT + F ++Y PR S+F+I + KY +A+ + +
Sbjct: 222 TVMPSSVLSSDSMHIGVLAAANHAAATSSRFTIFYNPRQSPSEFVIPVAKYQKAICSLQV 281
Query: 239 AVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVS 297
+VGMR++M FE E+S RR+ GT+ G+ D P W +S WRSLKV WDE + R RVS
Sbjct: 282 SVGMRFRMVFETEESSVRRYMGTITGMGDLDPIRWPNSHWRSLKVGWDESTAGERQRRVS 341
Query: 298 PWEIEPFVASATPNLV--QPVLAKNKRPR 324
WEIEP TP L+ PV + KRPR
Sbjct: 342 LWEIEPLT---TPFLLCPPPVAFRTKRPR 367
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 55/90 (61%), Gaps = 3/90 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 588
R+ TKV G +VGR++D+ Y L EL +F++ L RT W++V+ D+E D
Sbjct: 740 RTFTKVHKLG-SVGRSIDVQKFQNYSELRAELARLFNLDNLLDDPQRTGWQLVFVDNEND 798
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKM 618
+LVGDDPW EF N V+ I I S ++++M
Sbjct: 799 TLLVGDDPWEEFVNYVRSIKILSPNEIQQM 828
>gi|356521420|ref|XP_003529354.1| PREDICTED: auxin response factor 3-like [Glycine max]
Length = 709
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 153/328 (46%), Positives = 217/328 (66%), Gaps = 16/328 (4%)
Query: 21 LPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQ-NEPTTPDPCPADSPRPKV------ 73
+PS + CRV+++ L AE+ +DEV+ Q+ L+PE Q ++ AD
Sbjct: 70 IPSHVFCRVLDVKLHAEEGSDEVHCQVVLVPETEQVHQKLREGEFDADGEEEDAEAVMKS 129
Query: 74 ---HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKH 130
H F K LTASDTSTHGGFSV R+ A +C PPLD +Q P+QELVAKDLHG EWRF+H
Sbjct: 130 TTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGQEWRFRH 189
Query: 131 IFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVIS 190
I+RGQPRRHLLTTGWS FV K+LV+GD +FLRGE+GEL +G+R A+ +S S +S
Sbjct: 190 IYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGELRLGIRRAAQLKSGSTFSALS 249
Query: 191 SQSMHLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRF 248
Q + L +A++ + F ++Y PR TS+FII ++++L++++ ++ GMR++MRF
Sbjct: 250 GQQLSPTSLMDVVNALSARCAFSIHYNPRVSTSEFIIPIHRFLKSLDYSYSAGMRFRMRF 309
Query: 249 EGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVAS 307
E ED+ ERRF+G +VG+ D P W SKWR L V+WD+ +TR +RVSPWEIEP ++
Sbjct: 310 ETEDAAERRFTGLIVGIADVDPVRWPGSKWRCLMVRWDD-LEVTRHNRVSPWEIEPSGSA 368
Query: 308 ATPNLVQPVLAKNKRPRLSMEVPPLDLP 335
+T N + + A KR ++ + L+ P
Sbjct: 369 STANNL--MSAGLKRTKIGLPSAKLEFP 394
>gi|301793225|emb|CBA12003.1| putative auxin response factor 6/8 [Ginkgo biloba]
Length = 924
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 156/312 (50%), Positives = 218/312 (69%), Gaps = 12/312 (3%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP----EPSQN 56
EQ+ ASTN+E++ IP + LP +++C++ N+ L A+ ETDEVYAQ+TL P EP ++
Sbjct: 48 EQVAASTNKEVDAHIPNYPNLPPQLICQLHNVTLQADVETDEVYAQMTLQPLNPQEPKES 107
Query: 57 EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQEL 116
P+ P + F K LTASDTSTHGGFS+ R+ A + P LD Q P QEL
Sbjct: 108 YLAPALGTPSGQP---TNYFCKTLTASDTSTHGGFSIPRRAAEKVFPLLDFTQQPPVQEL 164
Query: 117 VAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRC 176
+A+DLH EW+F+HI+RGQP+RHLLTTGWS FV++KRLVAGD+ +F+R + G+L +G+R
Sbjct: 165 IARDLHDTEWKFRHIYRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIRNDKGQLLLGIRR 224
Query: 177 LARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV 234
R Q MPSSV+SS SMH+GVLA A+HA +T F ++Y PR S+F++ L K+ +AV
Sbjct: 225 ANRAQMVMPSSVLSSDSMHIGVLAAAAHAASTNCRFTIFYNPRASPSEFVVPLAKFEKAV 284
Query: 235 -NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITR 292
+ + ++GMR++M FE E+S RR+ GT+ G+ D P+ W++S+WRS+KV WDE + R
Sbjct: 285 YHTRVSIGMRFRMLFETEESTVRRYMGTITGIGDLDPYRWRNSQWRSIKVGWDESTAGER 344
Query: 293 PDRVSPWEIEPF 304
RVS WEIEP
Sbjct: 345 QPRVSLWEIEPL 356
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 588
R+ TKV G +VGR+LD+T GY L EL+ MF ++GQL R+ W++V+ D E D
Sbjct: 792 RTFTKVYKLG-SVGRSLDVTRFNGYQELRAELDRMFGLEGQLEDPQRSGWQLVFVDKEKD 850
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++L+GDDPW EF N V+ I I S +V +MS
Sbjct: 851 VLLLGDDPWEEFVNSVRFIKILSPPEVMQMS 881
>gi|359485334|ref|XP_002282830.2| PREDICTED: auxin response factor 6-like [Vitis vinifera]
Length = 891
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 164/329 (49%), Positives = 223/329 (67%), Gaps = 9/329 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQNEPT 59
EQ+ ASTN+E++ IP + L +++C++ N+ + A+ ETDEVYAQ+TL P P + +
Sbjct: 51 EQVAASTNKEVDAHIPNYPSLAPQLICQLHNVTMHADVETDEVYAQMTLQPLSPQEQKEV 110
Query: 60 TPDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
P SP + + F K LTASDTSTHGGFSV R+ A + PPLD Q P QEL+A
Sbjct: 111 CLLPAELGSPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYTQQPPAQELIA 170
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
+DLHG EW+F+HIFRGQP+RHLLTTGWS FV++KRL+AGD+ +F+ E +L +G+R
Sbjct: 171 RDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLIAGDSVLFIWNEKNQLLLGIRRAN 230
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-N 235
R Q+ MPSSV+SS SMH+G+LA A+HA AT + F ++Y PR S+F+I L KY +AV +
Sbjct: 231 RPQTIMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYAKAVYH 290
Query: 236 NKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPD 294
+ +VGMR++M FE E+S RR+ GT+ G+ D P W +S WRS+KV WDE + R
Sbjct: 291 TRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQP 350
Query: 295 RVSPWEIEPFVASATPNLVQPVLAKNKRP 323
RVS WEIEP + P P + KRP
Sbjct: 351 RVSLWEIEPL--TTFPMYPSPFPLRLKRP 377
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 56/90 (62%), Gaps = 3/90 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 588
R+ KV G + GR+LD+T YD L EL MF ++G+L R+ W++V+ D E D
Sbjct: 777 RTFVKVHKLG-SFGRSLDITKFSSYDELRGELGRMFGLEGRLEDPLRSGWQLVFVDREND 835
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKM 618
++L+GDDPW EF N V I I S +V++M
Sbjct: 836 VLLLGDDPWQEFVNNVWYIKILSPLEVQQM 865
>gi|357491655|ref|XP_003616115.1| Auxin response factor [Medicago truncatula]
gi|355517450|gb|AES99073.1| Auxin response factor [Medicago truncatula]
Length = 841
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 158/309 (51%), Positives = 219/309 (70%), Gaps = 6/309 (1%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ A+TN+E++ +IP + LP +++C++ N+ + A+ ETDEVYAQ+TL P Q + T
Sbjct: 52 EQVSATTNREIDGQIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPQEQKDT 111
Query: 61 PDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
P P + + F K LTASDTSTHGGFSV R+ A + PPLD +Q P QEL+A+
Sbjct: 112 FLPMELGIPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIAR 171
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ E +L +G+R +R
Sbjct: 172 DLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASR 231
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NN 236
Q+ MPSSV+SS SMH+G+LA A+HA AT + F V++ PR S+F+I L+KY++AV +
Sbjct: 232 PQTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLSKYIKAVYHT 291
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+ +VGMR++M FE E+S RR+ GT+ + D P W +S WRS+KV WDE + R R
Sbjct: 292 RVSVGMRFRMLFETEESSVRRYMGTITSISDMDPVRWPNSHWRSVKVGWDESTAGERQPR 351
Query: 296 VSPWEIEPF 304
VS WEIEP
Sbjct: 352 VSLWEIEPL 360
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 74/135 (54%), Gaps = 3/135 (2%)
Query: 487 STISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQM-QGVAVGR 545
+T SA AD+ F+ +Q S + QS N++ V++ + +VGR
Sbjct: 669 TTASAHADASTMPLGESSFQGSPYPCMQDSSELLQSAGQVDAQNQTPIFVKVYKSGSVGR 728
Query: 546 ALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEFCNM 603
+LD++ Y L +EL +MF I+G+ R+ W++V+ D E D++L+GDDPW F N
Sbjct: 729 SLDISRFNSYHELREELAQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWESFVNN 788
Query: 604 VKRIFICSSQDVKKM 618
V I I S +D++KM
Sbjct: 789 VWYIKILSPEDIQKM 803
>gi|449515293|ref|XP_004164684.1| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 6-like,
partial [Cucumis sativus]
Length = 884
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 163/328 (49%), Positives = 224/328 (68%), Gaps = 8/328 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ ASTN+E++ +IP + LP +++C++ N+ + A+ ETDEVYAQ+TL P +Q
Sbjct: 36 EQVAASTNREVDAQIPNYPSLPPQLICQLHNLTMHADAETDEVYAQMTLQPLSAQELKEA 95
Query: 61 PDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
P +P R + F K LTASDTSTHGGFSV R+ A + PPLD + P QEL+A+
Sbjct: 96 YLPAELGTPSRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSMQPPAQELIAR 155
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD +F+ E +L +G+R +R
Sbjct: 156 DLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDAVLFIWNEKNQLLLGIRRASR 215
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NN 236
Q+ MPSSV+SS SMHLG+LA A+HA AT + F +++ PR S+F+I L KY++AV +
Sbjct: 216 PQTVMPSSVLSSDSMHLGLLAAAAHAAATISRFTIFFNPRASPSEFVIPLAKYVKAVYHT 275
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+ +VGMR++M FE +S RR+ GT+ G+ D P W++S WRS+KV WDE + R R
Sbjct: 276 RVSVGMRFRMLFETXESSVRRYMGTITGISDLDPVRWQNSHWRSVKVGWDESTAGERQPR 335
Query: 296 VSPWEIEPFVASATPNLVQPVLAKNKRP 323
VS WEIEP + P P + KRP
Sbjct: 336 VSLWEIEPL--TTFPMYPSPFPLRLKRP 361
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 530 NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEG 587
N + KV G R+LD+T Y L EL MF ++G+L R+ W++V+ D E
Sbjct: 750 NGTFVKVHKSGT-YSRSLDITKFNSYPELRSELARMFGLEGELEDPLRSGWQLVFVDREN 808
Query: 588 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 618
D++L+GD PW EF N V I I S ++V+ M
Sbjct: 809 DVLLLGDGPWPEFVNSVWCIKILSPEEVQDM 839
>gi|379323198|gb|AFD01298.1| auxin response factor 4 [Brassica rapa subsp. pekinensis]
Length = 758
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 157/326 (48%), Positives = 206/326 (63%), Gaps = 25/326 (7%)
Query: 16 IPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLP---------------EPSQNEPTT 60
IP L +I CRV N+HL+A +ETDEVY Q+TLLP E +E
Sbjct: 94 IPKLDLSPQIFCRVANVHLLANKETDEVYTQVTLLPLQELSVLNGEGKEVRELGGDEEKN 153
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
+P H F K LTASDTSTHGGFSV R+ A +C PLD Q P+QEL+AKD
Sbjct: 154 GSSSVKKTP----HMFCKTLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKD 209
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
LHG EW+F+HI+RGQPRRHLLTTGWS FV+ K LV+GD +FLR ENGEL +G+R AR
Sbjct: 210 LHGVEWKFRHIYRGQPRRHLLTTGWSIFVSQKSLVSGDAVLFLRDENGELRLGIRRSARP 269
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKF 238
++ +P S+I S +L+ ++AV+ ++MF V+Y PR S+F+I KY+ ++ N
Sbjct: 270 RNGLPDSIIQKYSSS-SILSLVANAVSNKSMFHVFYSPRATHSEFVIPYEKYITSIKNPI 328
Query: 239 AVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVS 297
+G R++MRFE +DSPERR +G V GV D P+ W +SKWR L V+WDE +RVS
Sbjct: 329 CIGTRFRMRFEMDDSPERRCAGVVTGVCDMDPYRWPNSKWRCLLVRWDESFMSDHQERVS 388
Query: 298 PWEIEPFVASATPNLVQPVLAKNKRP 323
PWEI+P + + P L + KRP
Sbjct: 389 PWEIDP--SGSLPPLSIQSSPRPKRP 412
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 70/103 (67%), Gaps = 8/103 (7%)
Query: 515 VSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT 574
S ++S SK+ C TKV QG VGRA+DL+ L GY+ L+ ELE +F+++G L
Sbjct: 628 ASNQQSSSKRIC-------TKVHKQGSLVGRAIDLSRLNGYNDLLTELERLFNMEGLLRD 680
Query: 575 RTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVK 616
K W I+YTD E DMM+VGDDPWH+FC++V +I + + ++V+
Sbjct: 681 PEKGWRILYTDSENDMMVVGDDPWHDFCSVVLKIHLYTKEEVE 723
>gi|301793207|emb|CBA11994.1| putative auxin response factor 6 [Amborella trichopoda]
Length = 914
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 166/330 (50%), Positives = 224/330 (67%), Gaps = 12/330 (3%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ ASTN+E++ IP + LP +++C++ N+ + A+ ETDEVYAQ+TL P Q +
Sbjct: 51 EQVAASTNKEVDAHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLNPQEQKDA 110
Query: 61 PDPCPAD---SPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELV 117
PAD S + + F K LTASDTSTHGGFSV R+ A + PPLD Q P QEL+
Sbjct: 111 F--LPADLGTSGKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELI 168
Query: 118 AKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCL 177
A+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ E +L +G+R
Sbjct: 169 ARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA 228
Query: 178 ARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV- 234
R Q+ MPSSV+SS SMH+G+LA A+HA AT + F ++Y PR S+F+I L KY++AV
Sbjct: 229 NRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVY 288
Query: 235 NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRP 293
+ + +VGMR++M FE E+S RR+ GT+ G+ D P W +S WRS+KV WDE + R
Sbjct: 289 HTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQ 348
Query: 294 DRVSPWEIEPFVASATPNLVQPVLAKNKRP 323
RVS WEIEP + P P + KRP
Sbjct: 349 PRVSLWEIEPL--TTFPMYPSPFPLRLKRP 376
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 542 AVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHE 599
+ GR+L++T Y L EL MF ++GQL R+ W+++Y D + D++L+GDDPW +
Sbjct: 791 SFGRSLEITRFSSYLELRSELARMFGLEGQLEDPLRSGWQLIYIDRDNDVLLLGDDPWPD 850
Query: 600 FCNMVKRIFICSSQDVKKMS 619
F I I S Q++++M
Sbjct: 851 FVKNASCIKILSPQELQQMG 870
>gi|297740768|emb|CBI30950.3| unnamed protein product [Vitis vinifera]
Length = 531
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 165/328 (50%), Positives = 222/328 (67%), Gaps = 8/328 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ ASTN+E++ IP + LP +++C++ N+ + A+ ETDEVYAQ+TL P Q +
Sbjct: 51 EQVAASTNKEVDAHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPQEQKDA 110
Query: 61 PDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
P P + + F K LTASDTSTHGGFSV R+ A + PPLD +Q P QEL+A+
Sbjct: 111 YLPAELGVPSKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIAR 170
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ E +L +G+R R
Sbjct: 171 DLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANR 230
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NN 236
Q+ MPSSV+SS SMHLG+LA A+HA AT + F ++Y PR S+F+I L KY +AV +
Sbjct: 231 PQTVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYAKAVYHT 290
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+ +VGMR++M FE E+S RR+ GT+ G+ D P W +S WRS+KV WDE + R R
Sbjct: 291 RVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPR 350
Query: 296 VSPWEIEPFVASATPNLVQPVLAKNKRP 323
VS WEIEP + P P + KRP
Sbjct: 351 VSLWEIEPL--TTFPMYPSPFPLRLKRP 376
>gi|58802748|gb|AAW82475.1| auxin response factor 2 [Triticum aestivum]
Length = 202
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 143/202 (70%), Positives = 170/202 (84%), Gaps = 2/202 (0%)
Query: 82 ASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL 141
AS TSTHGGFSVLR+HA ECLPPLDM QS PTQELVAKDLHG EWRF+HIFRGQPRRHLL
Sbjct: 1 ASGTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMEWRFRHIFRGQPRRHLL 60
Query: 142 TTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLAT 201
+GWS FV+SKRLVAGD F+FLRGE+GEL VGVR RQ S++ SSVISS SMHLGVLAT
Sbjct: 61 QSGWSVFVSSKRLVAGDAFIFLRGESGELRVGVRRAMRQLSNIASSVISSHSMHLGVLAT 120
Query: 202 ASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFS 259
A HA+ T+TMF VYYKPRT S+FII +KY+++V N +++G R+KMRFEGE++PE+RF+
Sbjct: 121 AWHAINTKTMFTVYYKPRTSRSEFIIPYDKYMDSVKNIYSIGTRFKMRFEGEEAPEQRFT 180
Query: 260 GTVVGVEDFSPHWKDSKWRSLK 281
GT+VG ++ W +S WRSLK
Sbjct: 181 GTIVGSDNLDQLWPESSWRSLK 202
>gi|302143499|emb|CBI22060.3| unnamed protein product [Vitis vinifera]
Length = 836
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 164/329 (49%), Positives = 223/329 (67%), Gaps = 9/329 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQNEPT 59
EQ+ ASTN+E++ IP + L +++C++ N+ + A+ ETDEVYAQ+TL P P + +
Sbjct: 51 EQVAASTNKEVDAHIPNYPSLAPQLICQLHNVTMHADVETDEVYAQMTLQPLSPQEQKEV 110
Query: 60 TPDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
P SP + + F K LTASDTSTHGGFSV R+ A + PPLD Q P QEL+A
Sbjct: 111 CLLPAELGSPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYTQQPPAQELIA 170
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
+DLHG EW+F+HIFRGQP+RHLLTTGWS FV++KRL+AGD+ +F+ E +L +G+R
Sbjct: 171 RDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLIAGDSVLFIWNEKNQLLLGIRRAN 230
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-N 235
R Q+ MPSSV+SS SMH+G+LA A+HA AT + F ++Y PR S+F+I L KY +AV +
Sbjct: 231 RPQTIMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYAKAVYH 290
Query: 236 NKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPD 294
+ +VGMR++M FE E+S RR+ GT+ G+ D P W +S WRS+KV WDE + R
Sbjct: 291 TRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQP 350
Query: 295 RVSPWEIEPFVASATPNLVQPVLAKNKRP 323
RVS WEIEP + P P + KRP
Sbjct: 351 RVSLWEIEPL--TTFPMYPSPFPLRLKRP 377
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 56/90 (62%), Gaps = 3/90 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 588
R+ KV G + GR+LD+T YD L EL MF ++G+L R+ W++V+ D E D
Sbjct: 680 RTFVKVHKLG-SFGRSLDITKFSSYDELRGELGRMFGLEGRLEDPLRSGWQLVFVDREND 738
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKM 618
++L+GDDPW EF N V I I S +V++M
Sbjct: 739 VLLLGDDPWQEFVNNVWYIKILSPLEVQQM 768
>gi|357460625|ref|XP_003600594.1| Auxin response factor [Medicago truncatula]
gi|355489642|gb|AES70845.1| Auxin response factor [Medicago truncatula]
Length = 849
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 158/309 (51%), Positives = 220/309 (71%), Gaps = 6/309 (1%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ A+TN+E++ +IP + LP +++C++ N+ + A+ ETDEVYAQ+TL P + + T
Sbjct: 54 EQVSATTNREIDGQIPNYPSLPPQLVCQLHNVTMHADVETDEVYAQMTLQPLTPEEQKDT 113
Query: 61 PDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
P P + + F K LTASDTSTHGGFSV R+ A + PPLD +Q P QEL+A+
Sbjct: 114 FLPMELGIPSKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIAR 173
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ E +L +G+R R
Sbjct: 174 DLHDVEWKFRHIFRGQPKRHLLTTGWSIFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANR 233
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NN 236
Q+ MPSSV+SS SMH+G+LA A+HA AT + F V+Y PR S+F+I L+KY++AV +
Sbjct: 234 PQTVMPSSVLSSDSMHIGLLAAAAHASATNSCFTVFYNPRASPSEFVIPLSKYIKAVYHT 293
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDR 295
+ +VGMR++M FE E+S RR+ GT+ G+ D + W++S WRS+KV WDE + R R
Sbjct: 294 RISVGMRFRMLFETEESSVRRYMGTITGISDLDAVRWQNSHWRSVKVGWDESTAGERQPR 353
Query: 296 VSPWEIEPF 304
VS WEIEP
Sbjct: 354 VSLWEIEPL 362
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 65/102 (63%), Gaps = 3/102 (2%)
Query: 521 QSKQSCLTSNRSRTKVQM-QGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTK 577
Q+ + T N++ T V++ + +VGR+LD++ Y L +EL +MF I+G+L R+
Sbjct: 711 QNAEQIDTQNQNPTFVKVYKSGSVGRSLDISRFSCYRELREELGQMFGIEGKLEDPLRSG 770
Query: 578 WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
W++V+ D E D++L+GDDPW F N V I I S +D++KM
Sbjct: 771 WQLVFVDRENDVLLLGDDPWESFVNNVWYIKILSPEDIQKMG 812
>gi|300373066|gb|ADG43164.1| auxin response factor 30 [Zea mays]
Length = 809
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 160/310 (51%), Positives = 218/310 (70%), Gaps = 8/310 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP--EPSQNEP 58
EQ+ ASTN+E++ IP + LP +++C++ ++ + A+ ETDEVYAQ+TL P QN+P
Sbjct: 52 EQVAASTNKEVDGHIPNYPNLPPQLICQLHDVTMHADVETDEVYAQMTLQPLNPQEQNDP 111
Query: 59 TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
P S +P + F K LTASDTSTHGGFSV R+ A PPLD Q P QEL+A
Sbjct: 112 YLPAEMGIMSKQP-TNYFCKTLTASDTSTHGGFSVPRRAAERVFPPLDFTQQPPVQELIA 170
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
+D+H EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ E +L +G+R +
Sbjct: 171 RDIHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAS 230
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-N 235
R Q+ MPSSV+SS SMH+G+LA A+HA AT + F +++ PR S+F+I L+KY++AV +
Sbjct: 231 RPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFFNPRASPSEFVIPLSKYIKAVFH 290
Query: 236 NKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPD 294
+ +VGMR++M FE E+S RR+ GT+ V D P W S WRS+KV WDE + RP
Sbjct: 291 TRISVGMRFRMLFETEESSVRRYMGTITEVSDADPVRWPSSYWRSVKVGWDESTAGERPP 350
Query: 295 RVSPWEIEPF 304
RVS WEIEP
Sbjct: 351 RVSLWEIEPL 360
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 61/97 (62%), Gaps = 4/97 (4%)
Query: 529 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 586
+ R+ KV G +VGR+LD+T Y L +EL +MF IKGQL R+ W++V+ D E
Sbjct: 708 TTRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRE 766
Query: 587 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS-PGS 622
D++L+GDDPW F N V I I S +DV KM PG+
Sbjct: 767 NDVLLLGDDPWESFVNSVWYIKILSPEDVHKMGKPGN 803
>gi|357161592|ref|XP_003579140.1| PREDICTED: auxin response factor 25-like [Brachypodium distachyon]
Length = 934
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 177/406 (43%), Positives = 249/406 (61%), Gaps = 32/406 (7%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP--EPSQNEP 58
EQ+ ASTN+E++ +IP + LP +++C++ N+ + A+ ETDEVYAQ+TL P Q EP
Sbjct: 94 EQVAASTNKEVDGQIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKEP 153
Query: 59 TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
P A S +P + F K LTASDTSTHGGFSV R+ A + PPLD + P QEL+A
Sbjct: 154 FLPIELGAASKQP-TNYFCKTLTASDTSTHGGFSVPRRSAEKVFPPLDFSLQPPCQELIA 212
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ +N +L +G+R
Sbjct: 213 RDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIWNDNNQLLLGIRHAN 272
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-N 235
R Q+ MPSSV+SS SMH+G+LA A+HA AT + F ++Y PR+ S+F+I L KY+++V +
Sbjct: 273 RPQTIMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRSSPSEFVIPLAKYVKSVYH 332
Query: 236 NKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPD 294
+ +VGMR++M FE E+S RR+ GTV + D S W +S WRS+KV WDE + +
Sbjct: 333 TRVSVGMRFRMLFETEESSVRRYMGTVTAISDLDSVRWPNSHWRSVKVGWDESTAGEKQP 392
Query: 295 RVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQ 354
RVS WEIEP + + P P PW++ L H +
Sbjct: 393 RVSLWEIEPLT--------------------TFPMYPTAFPLRLKRPWASGLPSMHGMFN 432
Query: 355 LSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVK 400
V +D + + W + +SNF S WL PR++
Sbjct: 433 -GVKNDDFARYSSLMWLGNGDRGTQSSNFQGLGVS--PWL-QPRIE 474
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 544 GRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEFC 601
GR+LD+T Y L ELE +F ++GQL R+ W++V+ D E D++LVGDDPW EF
Sbjct: 813 GRSLDITKFSSYYELRSELEHLFGLEGQLEDPVRSGWQLVFVDRENDILLVGDDPWQEFV 872
Query: 602 NMVKRIFICSSQDVKKM 618
N V I I S QDV +M
Sbjct: 873 NSVWCIKILSPQDVHQM 889
>gi|224062573|ref|XP_002300854.1| predicted protein [Populus trichocarpa]
gi|222842580|gb|EEE80127.1| predicted protein [Populus trichocarpa]
Length = 372
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 161/311 (51%), Positives = 221/311 (71%), Gaps = 9/311 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP---EPSQNE 57
EQ+ ASTN+E++ IP + LP++++C++ N+ + A+ ETDEVYAQ+TL P E ++
Sbjct: 36 EQVAASTNKEVDAHIPNYPSLPAQLICQLHNVTMHADVETDEVYAQMTLQPLSPEDKKDA 95
Query: 58 PTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELV 117
P S +P + F K LTASDTSTHGGFSV R+ A + PPLD +Q+ P QEL+
Sbjct: 96 YLLPAELGTASKQPSNY-FCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQTPPAQELI 154
Query: 118 AKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCL 177
A+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ E +L +G+R
Sbjct: 155 ARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA 214
Query: 178 ARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV- 234
R Q+ MPSSV+SS SMH+G+LA A+HA AT + F ++Y PRT S+F+I L KY++AV
Sbjct: 215 NRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRTSPSEFVIPLVKYIKAVY 274
Query: 235 NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRP 293
+ + +VGMR++M FE E+S RR+ GT+ G+ D P W +S WRS+KV WDE + R
Sbjct: 275 HTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPARWPNSHWRSVKVGWDESTAGERQ 334
Query: 294 DRVSPWEIEPF 304
RVS WEIEP
Sbjct: 335 PRVSLWEIEPL 345
>gi|359359078|gb|AEV40985.1| putative auxin response factor [Oryza punctata]
Length = 818
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 160/310 (51%), Positives = 217/310 (70%), Gaps = 8/310 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP--EPSQNEP 58
EQ+ ASTN+E+ IP + LP++++C++ ++ + A+ ETDEVYAQ+TL P QN+
Sbjct: 58 EQVAASTNKEVEGHIPNYPNLPAQLICQLHDVTMHADVETDEVYAQMTLQPLNPQEQNDA 117
Query: 59 TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
P S +P + F K LTASDTSTHGGFSV R+ A PPLD Q P QEL+A
Sbjct: 118 YLPAEMGIMSKQP-TNYFCKTLTASDTSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIA 176
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
+D+H EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ E +L +G+R +
Sbjct: 177 RDIHDIEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAS 236
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-N 235
R Q+ MPSSV+SS SMH+G+LA A+HA AT + F ++Y PR S+F+I L+KY++AV +
Sbjct: 237 RPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLSKYIKAVFH 296
Query: 236 NKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPD 294
+ +VGMR++M FE E+S RR+ GT+ V D P W S WRS+KV WDE + RP
Sbjct: 297 TRISVGMRFRMLFETEESSVRRYMGTITEVSDADPVRWPSSYWRSVKVGWDESTAGERPP 356
Query: 295 RVSPWEIEPF 304
RVS WEIEP
Sbjct: 357 RVSLWEIEPL 366
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 529 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 586
+ R+ KV G +VGR+LD+T Y L +EL +MF IKGQL R+ W++V+ D E
Sbjct: 717 TTRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRE 775
Query: 587 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMF 627
D++L+GDDPW F N V I I S +DV KM P +
Sbjct: 776 NDVLLLGDDPWESFVNSVWYIKILSPEDVHKMGKQGNDPRY 816
>gi|326517318|dbj|BAK00026.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 891
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 161/310 (51%), Positives = 219/310 (70%), Gaps = 8/310 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP--EPSQNEP 58
EQ+ ASTN+E++ +IP + LP +++C++ N+ + A+ ETDEVYAQ+TL P Q EP
Sbjct: 55 EQVAASTNKEVDAQIPNYPNLPPQLICQLHNVTMHADAETDEVYAQMTLQPLSPEEQKEP 114
Query: 59 TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
P A S +P + F K LTASDTSTHGGFSV R+ A + PPLD + P QEL+A
Sbjct: 115 FLPIELGAASKQP-TNYFCKTLTASDTSTHGGFSVPRRSAEKVFPPLDFSLQPPCQELIA 173
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
KDLH EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ +N +L +G+R
Sbjct: 174 KDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIWNDNNQLLLGIRHAN 233
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-N 235
R Q+ MPSSV+SS SMH+G+LA A+HA AT + F ++Y PR S+FII L KY+++V +
Sbjct: 234 RPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFIIPLAKYVKSVYH 293
Query: 236 NKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPD 294
+ +VGMR++M FE E+S RR+ GT+ + D S W +S WRS+KV WDE + +
Sbjct: 294 TRVSVGMRFRMLFETEESSVRRYMGTITTISDLDSARWPNSHWRSVKVGWDESTAGEKQP 353
Query: 295 RVSPWEIEPF 304
RVS WEIEP
Sbjct: 354 RVSLWEIEPL 363
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 59/100 (59%), Gaps = 11/100 (11%)
Query: 544 GRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEFC 601
GR+LD+T Y L ELE +F ++GQL R+ W++V+ D E D++LVGDDPW EF
Sbjct: 769 GRSLDITKFSSYYELRSELEHLFGLEGQLEDPVRSGWQLVFVDRENDILLVGDDPWQEFV 828
Query: 602 NMVKRIFICSSQDVKKMSPGSKLPMFSIEGEDILLSSDSA 641
N V I I S Q+V++M G GE +L S+ A
Sbjct: 829 NSVGCIKILSPQEVQRMVRG---------GEGLLSSAPGA 859
>gi|357123410|ref|XP_003563403.1| PREDICTED: auxin response factor 17-like [Brachypodium distachyon]
Length = 907
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 163/329 (49%), Positives = 224/329 (68%), Gaps = 10/329 (3%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQ--NEP 58
EQ+ ASTN+E+ +IP + LP +++C++ N+ + A+ ETDEVYAQ+TL P Q +P
Sbjct: 59 EQVAASTNKEIESQIPNYPNLPPQLICQLHNVTMNADPETDEVYAQMTLQPLNPQELKDP 118
Query: 59 TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
P + +P + F K LTASDTSTHGGFSV R+ A + PPLD P QEL A
Sbjct: 119 YLPAELGTANKQP-TNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFTLQPPAQELFA 177
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
KDLHG EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ ++ +L +G+R
Sbjct: 178 KDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDSNQLLLGIRRAT 237
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAV-N 235
R Q+ MPSSV+SS SMH+G+LA A+HA +T + F ++Y PR S +F+I L KY++AV +
Sbjct: 238 RPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFTIFYNPRASPCEFVIPLAKYVKAVYH 297
Query: 236 NKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPD 294
+ +VGMR++M FE E+S RR+ GT+ G+ D + W +S WRS+KV WDE + R
Sbjct: 298 TRISVGMRFRMLFETEESSVRRYMGTITGISDLDAVRWPNSHWRSVKVGWDESTAGERQP 357
Query: 295 RVSPWEIEPFVASATPNLVQPVLAKNKRP 323
RVS WEIEP + P P + KRP
Sbjct: 358 RVSLWEIEPL--TTFPMYPTPFPLRLKRP 384
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 544 GRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEFC 601
GR+LD+T Y L EL +F ++GQL R+ W++V+ D E D++LVGDDPW EF
Sbjct: 787 GRSLDITRFSSYHELRRELGRLFGLEGQLEDPLRSGWQLVFVDREEDVLLVGDDPWQEFV 846
Query: 602 NMVKRIFICSSQDVKKM 618
N V I I S Q+V++M
Sbjct: 847 NSVFCIKILSPQEVQQM 863
>gi|224134659|ref|XP_002327459.1| predicted protein [Populus trichocarpa]
gi|222836013|gb|EEE74434.1| predicted protein [Populus trichocarpa]
Length = 799
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 160/312 (51%), Positives = 217/312 (69%), Gaps = 7/312 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ A+TN+E++ IP + LP +++C++ N+ + A+ ETDEVYAQ+TL P Q + T
Sbjct: 39 EQVAATTNKEVDAHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPQEQKET 98
Query: 61 PDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
P P + + F K LTASDTSTHGGFSV R+ A + PPLD Q P QEL+A+
Sbjct: 99 FLPLDLGMPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELIAR 158
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ E +L +G+R R
Sbjct: 159 DLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATR 218
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPR---TSQFIISLNKYLEAVNN 236
Q+ MPSSV+SS SMH+G+LA A+HA AT + F V+Y PR S+F+I L+KY++AV +
Sbjct: 219 PQTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFYNPRWASPSEFVIPLSKYVKAVFH 278
Query: 237 -KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPD 294
+ +VGMR++M FE E+S RR+ GT+ G D P W +S WRS+KV WDE + R
Sbjct: 279 IRVSVGMRFRMLFETEESSVRRYMGTITGTSDLDPVRWPNSHWRSVKVGWDESTAGERQP 338
Query: 295 RVSPWEIEPFVA 306
RVS WEIEP +
Sbjct: 339 RVSLWEIEPLTS 350
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 59/94 (62%), Gaps = 3/94 (3%)
Query: 528 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDD 585
T +R+ KV G +VGR+LD++ Y L +EL +MF I+G+L R+ W++V+ D
Sbjct: 693 TPSRTFVKVYKSG-SVGRSLDISRFSSYHELREELAQMFGIEGKLENPHRSGWQLVFVDR 751
Query: 586 EGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
E D++L+GDDPW F N V I I S +DV KM
Sbjct: 752 ENDVLLLGDDPWELFVNNVWYIKILSPEDVLKMG 785
>gi|122195722|sp|Q258Y5.1|ARFL_ORYSI RecName: Full=Auxin response factor 12; AltName: Full=OsARF8
gi|90265252|emb|CAH67705.1| H0624F09.13 [Oryza sativa Indica Group]
Length = 816
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 160/310 (51%), Positives = 217/310 (70%), Gaps = 8/310 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP--EPSQNEP 58
EQ+ ASTN+E+ IP + LP++++C++ ++ + A+ ETDEVYAQ+TL P QN+
Sbjct: 59 EQVAASTNKEVEGHIPNYPNLPAQLICQLHDVTMHADVETDEVYAQMTLQPLNPQEQNDA 118
Query: 59 TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
P S +P + F K LTASDTSTHGGFSV R+ A PPLD Q P QEL+A
Sbjct: 119 YLPAEMGIMSKQP-TNYFCKTLTASDTSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIA 177
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
+D+H EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ E +L +G+R +
Sbjct: 178 RDIHDIEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAS 237
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-N 235
R Q+ MPSSV+SS SMH+G+LA A+HA AT + F ++Y PR S+F+I L+KY++AV +
Sbjct: 238 RPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLSKYIKAVFH 297
Query: 236 NKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPD 294
+ +VGMR++M FE E+S RR+ GT+ V D P W S WRS+KV WDE + RP
Sbjct: 298 TRISVGMRFRMLFETEESSVRRYMGTITEVSDADPVRWPSSYWRSVKVGWDESTAGERPP 357
Query: 295 RVSPWEIEPF 304
RVS WEIEP
Sbjct: 358 RVSLWEIEPL 367
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 529 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 586
+ R+ KV G +VGR+LD+T Y L +EL +MF IKGQL R+ W++V+ D E
Sbjct: 715 ATRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRE 773
Query: 587 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMF 627
D++L+GDDPW F N V I I S +DV KM P +
Sbjct: 774 NDVLLLGDDPWESFVNSVWYIKILSPEDVHKMGKQGNDPRY 814
>gi|115461244|ref|NP_001054222.1| Os04g0671900 [Oryza sativa Japonica Group]
gi|122228290|sp|Q0J951.1|ARFL_ORYSJ RecName: Full=Auxin response factor 12; AltName: Full=OsARF8
gi|113565793|dbj|BAF16136.1| Os04g0671900 [Oryza sativa Japonica Group]
gi|222629754|gb|EEE61886.1| hypothetical protein OsJ_16583 [Oryza sativa Japonica Group]
Length = 818
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 160/310 (51%), Positives = 217/310 (70%), Gaps = 8/310 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP--EPSQNEP 58
EQ+ ASTN+E+ IP + LP++++C++ ++ + A+ ETDEVYAQ+TL P QN+
Sbjct: 59 EQVAASTNKEVEGHIPNYPNLPAQLICQLHDVTMHADVETDEVYAQMTLQPLNPQEQNDA 118
Query: 59 TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
P S +P + F K LTASDTSTHGGFSV R+ A PPLD Q P QEL+A
Sbjct: 119 YLPAEMGIMSKQP-TNYFCKTLTASDTSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIA 177
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
+D+H EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ E +L +G+R +
Sbjct: 178 RDIHDIEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAS 237
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-N 235
R Q+ MPSSV+SS SMH+G+LA A+HA AT + F ++Y PR S+F+I L+KY++AV +
Sbjct: 238 RPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLSKYIKAVFH 297
Query: 236 NKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPD 294
+ +VGMR++M FE E+S RR+ GT+ V D P W S WRS+KV WDE + RP
Sbjct: 298 TRISVGMRFRMLFETEESSVRRYMGTITEVSDADPVRWPSSYWRSVKVGWDESTAGERPP 357
Query: 295 RVSPWEIEPF 304
RVS WEIEP
Sbjct: 358 RVSLWEIEPL 367
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 529 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 586
+ R+ KV G +VGR+LD+T Y L +EL +MF IKGQL R+ W++V+ D E
Sbjct: 717 ATRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRE 775
Query: 587 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMF 627
D++L+GDDPW F N V I I S +DV KM P +
Sbjct: 776 NDVLLLGDDPWESFVNSVWYIKILSPEDVHKMGKQGNDPRY 816
>gi|168037233|ref|XP_001771109.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677642|gb|EDQ64110.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 372
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 173/332 (52%), Positives = 225/332 (67%), Gaps = 12/332 (3%)
Query: 1 MEQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQNEP 58
+EQ+ AST ++ + IP + LPSKI+C + N+ L A+ ETDEVYAQ+ LLP + S+ E
Sbjct: 36 IEQVAASTQKDADAHIPNYPSLPSKIICLLDNVTLHADPETDEVYAQMILLPIQISEKEA 95
Query: 59 TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
+ +P + F K LTASDTSTHGGFS+ R+ A + PPLD + P QELVA
Sbjct: 96 LLSPDLEVVNKQPTEY-FCKTLTASDTSTHGGFSIPRRAAEKVFPPLDFTRVPPAQELVA 154
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
+DLH EW F+HI+RGQPRRHLLTTGWS FV++KRL AGD+ +F+R + G L +G+R
Sbjct: 155 RDLHDQEWHFRHIYRGQPRRHLLTTGWSVFVSAKRLQAGDSVLFIRDDKGNLLLGIRRAN 214
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-N 235
RQQ+ MPSSV+SS SMH GVLA ASHA AT + F ++Y PR S+F+I L KY +A+ N
Sbjct: 215 RQQTVMPSSVLSSDSMHFGVLAAASHAAATSSRFKIFYNPRQSPSEFVIPLTKYHKALYN 274
Query: 236 NKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPD 294
+F VGMR++M FE E+S RR+ GT+ G+ D P W S WRSLKV WDE + R
Sbjct: 275 TQFTVGMRFRMVFETEESSVRRYVGTITGLGDLDPIRWPKSHWRSLKVGWDESTAGERQH 334
Query: 295 RVSPWEIEPFVASATPNLV--QPVLAKNKRPR 324
RVS WEIEP TP L+ P+ ++KRPR
Sbjct: 335 RVSLWEIEPL---TTPFLLCPPPLALRSKRPR 363
>gi|357166682|ref|XP_003580798.1| PREDICTED: auxin response factor 12-like [Brachypodium distachyon]
Length = 831
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 159/310 (51%), Positives = 216/310 (69%), Gaps = 8/310 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP--EPSQNEP 58
EQ+ ASTN+E+ IP + LP +++C++ ++ + A+ ETDEVYAQ+TL P QN+
Sbjct: 61 EQVAASTNKEVEGHIPNYPNLPPQLICQLHDVTMHADVETDEVYAQMTLQPLNPQEQNDA 120
Query: 59 TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
P S +P + F K LTASDTSTHGGFSV R+ A PPLD Q P QEL+A
Sbjct: 121 YLPAEMGIMSKQP-TNYFCKTLTASDTSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIA 179
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
+D+H EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ E +L +G+R +
Sbjct: 180 RDIHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLWLGIRRAS 239
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-N 235
R Q+ MPSSV+SS SMH+G+LA A+HA +T + F ++Y PR S+F+I L+KY++AV +
Sbjct: 240 RTQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFTIFYNPRACPSEFVIPLSKYIKAVFH 299
Query: 236 NKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPD 294
+ +VGMR++M FE E+S RR+ GT+ V D P W S WRS+KV WDE + RP
Sbjct: 300 TRISVGMRFRMLFETEESSVRRYMGTITEVSDADPVRWASSYWRSVKVGWDESTAGERPP 359
Query: 295 RVSPWEIEPF 304
RVS WEIEP
Sbjct: 360 RVSLWEIEPL 369
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 61/101 (60%), Gaps = 3/101 (2%)
Query: 529 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 586
++R+ KV G +VGR+LD+T Y L +EL +MF I+GQL R+ W++V+ D E
Sbjct: 730 TSRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIRGQLDDPDRSGWQLVFVDRE 788
Query: 587 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMF 627
D++L+GDDPW F N V I I S +DV K+ P +
Sbjct: 789 NDVLLLGDDPWESFVNSVWYIKILSPEDVHKLGKQGNDPRY 829
>gi|359359176|gb|AEV41081.1| putative auxin response factor [Oryza minuta]
Length = 821
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 160/310 (51%), Positives = 217/310 (70%), Gaps = 8/310 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP--EPSQNEP 58
EQ+ ASTN+E+ IP + LP++++C++ ++ + A+ ETDEVYAQ+TL P QN+
Sbjct: 58 EQVAASTNKEVEGHIPNYPNLPAQLICQLHDVTMHADVETDEVYAQMTLQPLNPQEQNDA 117
Query: 59 TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
P S +P + F K LTASDTSTHGGFSV R+ A PPLD Q P QEL+A
Sbjct: 118 YLPAEMGIMSKQP-TNYFCKTLTASDTSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIA 176
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
+D+H EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ E +L +G+R +
Sbjct: 177 RDIHDIEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAS 236
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-N 235
R Q+ MPSSV+SS SMH+G+LA A+HA AT + F ++Y PR S+F+I L+KY++AV +
Sbjct: 237 RPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLSKYIKAVFH 296
Query: 236 NKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPD 294
+ +VGMR++M FE E+S RR+ GT+ V D P W S WRS+KV WDE + RP
Sbjct: 297 TRISVGMRFRMLFETEESSVRRYMGTITEVSDADPVRWPSSYWRSVKVGWDESTAGERPP 356
Query: 295 RVSPWEIEPF 304
RVS WEIEP
Sbjct: 357 RVSLWEIEPL 366
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 529 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 586
+ R+ KV G +VGR+LD+T Y L +EL +MF IKGQL R+ W++V+ D E
Sbjct: 720 TTRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRE 778
Query: 587 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMF 627
D++L+GDDPW F N V I I S +DV KM P +
Sbjct: 779 NDVLLLGDDPWESFVNSVWYIKILSPEDVHKMGKQGNDPRY 819
>gi|359359130|gb|AEV41036.1| putative auxin response factor [Oryza minuta]
Length = 818
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 160/310 (51%), Positives = 217/310 (70%), Gaps = 8/310 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP--EPSQNEP 58
EQ+ ASTN+E+ IP + LP++++C++ ++ + A+ ETDEVYAQ+TL P QN+
Sbjct: 58 EQVAASTNKEVEGHIPNYPNLPAQLICQLHDVTMHADVETDEVYAQMTLQPLNPQEQNDA 117
Query: 59 TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
P S +P + F K LTASDTSTHGGFSV R+ A PPLD Q P QEL+A
Sbjct: 118 YLPAEMGIMSKQP-TNYFCKTLTASDTSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIA 176
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
+D+H EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ E +L +G+R +
Sbjct: 177 RDIHDIEWKFRHIFRGQPKRHLLTTGWSIFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAS 236
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-N 235
R Q+ MPSSV+SS SMH+G+LA A+HA AT + F ++Y PR S+F+I L+KY++AV +
Sbjct: 237 RPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLSKYIKAVFH 296
Query: 236 NKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPD 294
+ +VGMR++M FE E+S RR+ GT+ V D P W S WRS+KV WDE + RP
Sbjct: 297 TRISVGMRFRMLFETEESSVRRYMGTITEVSDADPVRWPSSYWRSVKVGWDESTAGERPP 356
Query: 295 RVSPWEIEPF 304
RVS WEIEP
Sbjct: 357 RVSLWEIEPL 366
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 529 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 586
+ R+ KV G +VGR+LD+T Y L +EL +MF IKGQL R+ W++V+ D E
Sbjct: 717 TTRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRE 775
Query: 587 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMF 627
D++L+GDDPW F N V I I S +DV KM P +
Sbjct: 776 NDVLLLGDDPWESFVNSVWYIKILSPEDVHKMGKQGNDPRY 816
>gi|359359225|gb|AEV41129.1| putative auxin response factor [Oryza officinalis]
Length = 819
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 160/310 (51%), Positives = 217/310 (70%), Gaps = 8/310 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP--EPSQNEP 58
EQ+ ASTN+E+ IP + LP++++C++ ++ + A+ ETDEVYAQ+TL P QN+
Sbjct: 58 EQVAASTNKEVEGHIPNYPNLPAQLICQLHDVTMHADVETDEVYAQMTLQPLNPQEQNDA 117
Query: 59 TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
P S +P + F K LTASDTSTHGGFSV R+ A PPLD Q P QEL+A
Sbjct: 118 YLPAEMGIMSKQP-TNYFCKTLTASDTSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIA 176
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
+D+H EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ E +L +G+R +
Sbjct: 177 RDIHDIEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAS 236
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-N 235
R Q+ MPSSV+SS SMH+G+LA A+HA AT + F ++Y PR S+F+I L+KY++AV +
Sbjct: 237 RPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLSKYIKAVFH 296
Query: 236 NKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPD 294
+ +VGMR++M FE E+S RR+ GT+ V D P W S WRS+KV WDE + RP
Sbjct: 297 TRISVGMRFRMLFETEESSVRRYMGTITEVSDADPVRWPSSYWRSVKVGWDESTAGERPP 356
Query: 295 RVSPWEIEPF 304
RVS WEIEP
Sbjct: 357 RVSLWEIEPL 366
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 529 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 586
+ R+ KV G +VGR+LD+T Y L +EL +MF IKGQL R+ W++V+ D E
Sbjct: 718 TTRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRE 776
Query: 587 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMF 627
D++L+GDDPW F N V I I S +DV KM P +
Sbjct: 777 NDVLLLGDDPWESFVNSVWYIKILSPEDVHKMGKQGNDPRY 817
>gi|19352049|dbj|BAB85918.1| auxin response factor 8 [Oryza sativa]
Length = 795
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 160/310 (51%), Positives = 217/310 (70%), Gaps = 8/310 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP--EPSQNEP 58
EQ+ ASTN+E+ IP + LP++++C++ ++ + A+ ETDEVYAQ+TL P QN+
Sbjct: 36 EQVAASTNKEVEGHIPNYPNLPAQLICQLHDVTMHADVETDEVYAQMTLQPLNPQEQNDA 95
Query: 59 TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
P S +P + F K LTASDTSTHGGFSV R+ A PPLD Q P QEL+A
Sbjct: 96 YLPAEMGIMSKQP-TNYFCKTLTASDTSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIA 154
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
+D+H EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ E +L +G+R +
Sbjct: 155 RDIHDIEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAS 214
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-N 235
R Q+ MPSSV+SS SMH+G+LA A+HA AT + F ++Y PR S+F+I L+KY++AV +
Sbjct: 215 RPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLSKYIKAVFH 274
Query: 236 NKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPD 294
+ +VGMR++M FE E+S RR+ GT+ V D P W S WRS+KV WDE + RP
Sbjct: 275 TRISVGMRFRMLFETEESSVRRYMGTITEVSDADPVRWPSSYWRSVKVGWDESTAGERPP 334
Query: 295 RVSPWEIEPF 304
RVS WEIEP
Sbjct: 335 RVSLWEIEPL 344
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 529 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 586
+ R+ KV G +VGR+LD+T Y L +EL +MF IKGQL R+ W++V+ D E
Sbjct: 694 ATRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRE 752
Query: 587 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMF 627
D++L+GDDPW F N V I I S +DV KM P +
Sbjct: 753 NDVLLLGDDPWESFVNSVWYIKILSPEDVHKMGKQGNDPRY 793
>gi|356554039|ref|XP_003545357.1| PREDICTED: auxin response factor 6-like [Glycine max]
Length = 866
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 162/329 (49%), Positives = 224/329 (68%), Gaps = 9/329 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQNEPT 59
EQ+ ASTN+E++ IP + LP +++C++ N+ + A+ ETDEVYAQ+TL P P + +
Sbjct: 52 EQVAASTNREVDAHIPNYPNLPPQLICQLHNVTMHADAETDEVYAQMTLQPLSPQEQKEV 111
Query: 60 TPDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
P +P + + F K LTASDTSTHGGFSV R+ A + PPLD +Q P QEL+A
Sbjct: 112 YLLPAELGTPGKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELIA 171
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ E +L +G+R
Sbjct: 172 RDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAN 231
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-N 235
R Q+ MPSSV+SS SMH+G+LA A+HA AT + F ++Y PR S+F+I L KY++AV +
Sbjct: 232 RPQTIMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYH 291
Query: 236 NKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPD 294
+ +VGMR++M FE E+S R+ GT+ G+ D P W +S WRS+KV WDE + R
Sbjct: 292 TRISVGMRFRMLFETEESSVPRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQP 351
Query: 295 RVSPWEIEPFVASATPNLVQPVLAKNKRP 323
RVS WEIEP + P P + +RP
Sbjct: 352 RVSLWEIEPL--TTFPMYPSPFPLRLRRP 378
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 56/92 (60%), Gaps = 5/92 (5%)
Query: 534 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH----TRTKWEIVYTDDEGDM 589
KV G + GR+LD++ YD LI EL MF ++GQL R+ W++V+ D E D+
Sbjct: 763 VKVHKSG-SFGRSLDISKFSSYDELISELARMFGLEGQLEDPKTQRSGWQLVFVDRENDV 821
Query: 590 MLVGDDPWHEFCNMVKRIFICSSQDVKKMSPG 621
+L+GDDPW EF N V I I S +V++M G
Sbjct: 822 LLLGDDPWQEFVNNVWYIKILSPLEVQQMGKG 853
>gi|15239481|ref|NP_198518.1| auxin response factor 8 [Arabidopsis thaliana]
gi|46576647|sp|Q9FGV1.2|ARFH_ARATH RecName: Full=Auxin response factor 8; AltName: Full=Protein FRUIT
WITHOUT FERTILIZATION
gi|4104931|gb|AAD02219.1| auxin response factor 8 [Arabidopsis thaliana]
gi|49616355|gb|AAT67074.1| ARF8 [Arabidopsis thaliana]
gi|332006754|gb|AED94137.1| auxin response factor 8 [Arabidopsis thaliana]
Length = 811
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 158/309 (51%), Positives = 217/309 (70%), Gaps = 6/309 (1%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ A+TN+E++ IP + LP +++C++ N+ + A+ ETDEVYAQ+TL P + + T
Sbjct: 50 EQVAATTNKEVDGHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPEEQKET 109
Query: 61 PDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
P P + + F K LTASDTSTHGGFSV R+ A + PPLD P QEL+A+
Sbjct: 110 FVPIELGIPSKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYTLQPPAQELIAR 169
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+R E +L +G+R R
Sbjct: 170 DLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIRNEKNQLFLGIRHATR 229
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQ--FIISLNKYLEAV-NN 236
Q+ +PSSV+SS SMH+G+LA A+HA AT + F V++ PR SQ F+I L+KY++AV +
Sbjct: 230 PQTIVPSSVLSSDSMHIGLLAAAAHASATNSCFTVFFHPRASQSEFVIQLSKYIKAVFHT 289
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDR 295
+ +VGMR++M FE E+S RR+ GT+ G+ D S W +S WRS+KV WDE + R R
Sbjct: 290 RISVGMRFRMLFETEESSVRRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPR 349
Query: 296 VSPWEIEPF 304
VS WEIEP
Sbjct: 350 VSLWEIEPL 358
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 61/95 (64%), Gaps = 3/95 (3%)
Query: 528 TSNRSRTKVQM-QGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTD 584
+SN+++ V++ + +VGR+LD++ Y L +EL +MF I+G L R+ W++V+ D
Sbjct: 700 SSNQTKNFVKVYKSGSVGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVFVD 759
Query: 585 DEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
E D++L+GDDPW F N V I I S +DV +M
Sbjct: 760 KENDILLLGDDPWESFVNNVWYIKILSPEDVHQMG 794
>gi|145334653|ref|NP_001078672.1| auxin response factor 8 [Arabidopsis thaliana]
gi|332006755|gb|AED94138.1| auxin response factor 8 [Arabidopsis thaliana]
Length = 773
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 158/310 (50%), Positives = 217/310 (70%), Gaps = 6/310 (1%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ A+TN+E++ IP + LP +++C++ N+ + A+ ETDEVYAQ+TL P + + T
Sbjct: 50 EQVAATTNKEVDGHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPEEQKET 109
Query: 61 PDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
P P + + F K LTASDTSTHGGFSV R+ A + PPLD P QEL+A+
Sbjct: 110 FVPIELGIPSKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYTLQPPAQELIAR 169
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+R E +L +G+R R
Sbjct: 170 DLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIRNEKNQLFLGIRHATR 229
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQ--FIISLNKYLEAV-NN 236
Q+ +PSSV+SS SMH+G+LA A+HA AT + F V++ PR SQ F+I L+KY++AV +
Sbjct: 230 PQTIVPSSVLSSDSMHIGLLAAAAHASATNSCFTVFFHPRASQSEFVIQLSKYIKAVFHT 289
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDR 295
+ +VGMR++M FE E+S RR+ GT+ G+ D S W +S WRS+KV WDE + R R
Sbjct: 290 RISVGMRFRMLFETEESSVRRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPR 349
Query: 296 VSPWEIEPFV 305
VS WEIEP
Sbjct: 350 VSLWEIEPLT 359
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 50/73 (68%), Gaps = 3/73 (4%)
Query: 528 TSNRSRTKVQM-QGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTD 584
+SN+++ V++ + +VGR+LD++ Y L +EL +MF I+G L R+ W++V+ D
Sbjct: 700 SSNQTKNFVKVYKSGSVGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVFVD 759
Query: 585 DEGDMMLVGDDPW 597
E D++L+GDDPW
Sbjct: 760 KENDILLLGDDPW 772
>gi|2982222|gb|AAC60794.1| transcription factor [Arabidopsis thaliana]
Length = 902
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 155/307 (50%), Positives = 215/307 (70%), Gaps = 6/307 (1%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEP-T 59
EQ+ ST + ++P + LPS+++C+V N+ L A++++DE+YAQ++L P S+ +
Sbjct: 82 EQVAVSTRRSATTQVPNYPNLPSQLMCQVHNVTLHADKDSDEIYAQMSLQPVHSERDVFP 141
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
PD + F K LTASDTSTHGGFSV R+ A + PPLD + PTQELV +
Sbjct: 142 VPDFGMLRGSKHPTEFFCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYSAQPPTQELVVR 201
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH W F+HI+RGQP+RHLLTTGWS FV SKRL AGD+ +F+R E +L VGVR R
Sbjct: 202 DLHENTWTFRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANR 261
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NN 236
QQ+++PSSV+S+ SMH+GVLA A+HA A +T F+++Y PR ++F+I L KY +A+ +
Sbjct: 262 QQTALPSSVLSADSMHIGVLAAAAHATANRTPFLIFYNPRACPAEFVIPLAKYRKAICGS 321
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+ +VGMR+ M FE EDS +RR+ GT+VG+ D P W SKWR+L+V+WDEP +P R
Sbjct: 322 QLSVGMRFGMMFETEDSGKRRYMGTIVGISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTR 381
Query: 296 VSPWEIE 302
VSPW+IE
Sbjct: 382 VSPWDIE 388
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 63/97 (64%), Gaps = 4/97 (4%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL-HTRTK-WEIVYTDDEGD 588
R+ KVQ G +VGR++D+T+ Y+ L +E MF ++G L H ++ W++VY D E D
Sbjct: 793 RTYIKVQKTG-SVGRSIDVTSFKDYEELKSAIECMFGLEGLLTHPQSSGWKLVYVDYESD 851
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS-PGSKL 624
++LVGDDPW EF V+ I I S +V++MS G KL
Sbjct: 852 VLLVGDDPWEEFVGCVRCIRILSPTEVQQMSEEGMKL 888
>gi|15223692|ref|NP_173414.1| auxin response factor 5 [Arabidopsis thaliana]
gi|21263766|sp|P93024.3|ARFE_ARATH RecName: Full=Auxin response factor 5; AltName:
Full=Auxin-responsive protein IAA24; AltName:
Full=Transcription factor MONOPTEROS
gi|12248005|gb|AAG50094.1|AF334716_1 auxin response factor 5 [Arabidopsis thaliana]
gi|2961085|gb|AAC39410.1| transcription factor [Arabidopsis thaliana]
gi|25083308|gb|AAN72061.1| transcription factor [Arabidopsis thaliana]
gi|31711776|gb|AAP68244.1| At1g19850 [Arabidopsis thaliana]
gi|332191785|gb|AEE29906.1| auxin response factor 5 [Arabidopsis thaliana]
Length = 902
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 155/307 (50%), Positives = 215/307 (70%), Gaps = 6/307 (1%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEP-T 59
EQ+ ST + ++P + LPS+++C+V N+ L A++++DE+YAQ++L P S+ +
Sbjct: 82 EQVAVSTRRSATTQVPNYPNLPSQLMCQVHNVTLHADKDSDEIYAQMSLQPVHSERDVFP 141
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
PD + F K LTASDTSTHGGFSV R+ A + PPLD + PTQELV +
Sbjct: 142 VPDFGMLRGSKHPTEFFCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYSAQPPTQELVVR 201
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH W F+HI+RGQP+RHLLTTGWS FV SKRL AGD+ +F+R E +L VGVR R
Sbjct: 202 DLHENTWTFRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANR 261
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NN 236
QQ+++PSSV+S+ SMH+GVLA A+HA A +T F+++Y PR ++F+I L KY +A+ +
Sbjct: 262 QQTALPSSVLSADSMHIGVLAAAAHATANRTPFLIFYNPRACPAEFVIPLAKYRKAICGS 321
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+ +VGMR+ M FE EDS +RR+ GT+VG+ D P W SKWR+L+V+WDEP +P R
Sbjct: 322 QLSVGMRFGMMFETEDSGKRRYMGTIVGISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTR 381
Query: 296 VSPWEIE 302
VSPW+IE
Sbjct: 382 VSPWDIE 388
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 64/97 (65%), Gaps = 4/97 (4%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL-HTRTK-WEIVYTDDEGD 588
R+ TKVQ G +VGR++D+T+ Y+ L +E MF ++G L H ++ W++VY D E D
Sbjct: 793 RTYTKVQKTG-SVGRSIDVTSFKDYEELKSAIECMFGLEGLLTHPQSSGWKLVYVDYESD 851
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS-PGSKL 624
++LVGDDPW EF V+ I I S +V++MS G KL
Sbjct: 852 VLLVGDDPWEEFVGCVRCIRILSPTEVQQMSEEGMKL 888
>gi|9758525|dbj|BAB08972.1| auxin responsive transcription factor [Arabidopsis thaliana]
Length = 821
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 158/309 (51%), Positives = 217/309 (70%), Gaps = 6/309 (1%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ A+TN+E++ IP + LP +++C++ N+ + A+ ETDEVYAQ+TL P + + T
Sbjct: 50 EQVAATTNKEVDGHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPEEQKET 109
Query: 61 PDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
P P + + F K LTASDTSTHGGFSV R+ A + PPLD P QEL+A+
Sbjct: 110 FVPIELGIPSKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYTLQPPAQELIAR 169
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+R E +L +G+R R
Sbjct: 170 DLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIRNEKNQLFLGIRHATR 229
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQ--FIISLNKYLEAV-NN 236
Q+ +PSSV+SS SMH+G+LA A+HA AT + F V++ PR SQ F+I L+KY++AV +
Sbjct: 230 PQTIVPSSVLSSDSMHIGLLAAAAHASATNSCFTVFFHPRASQSEFVIQLSKYIKAVFHT 289
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDR 295
+ +VGMR++M FE E+S RR+ GT+ G+ D S W +S WRS+KV WDE + R R
Sbjct: 290 RISVGMRFRMLFETEESSVRRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPR 349
Query: 296 VSPWEIEPF 304
VS WEIEP
Sbjct: 350 VSLWEIEPL 358
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 51/76 (67%), Gaps = 3/76 (3%)
Query: 528 TSNRSRTKVQM-QGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTD 584
+SN+++ V++ + +VGR+LD++ Y L +EL +MF I+G L R+ W++V+ D
Sbjct: 700 SSNQTKNFVKVYKSGSVGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVFVD 759
Query: 585 DEGDMMLVGDDPWHEF 600
E D++L+GDDPW +
Sbjct: 760 KENDILLLGDDPWEYY 775
>gi|414584844|tpg|DAA35415.1| TPA: hypothetical protein ZEAMMB73_535909 [Zea mays]
Length = 817
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 160/310 (51%), Positives = 216/310 (69%), Gaps = 8/310 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP--EPSQNEP 58
EQ+ ASTN+E++ IP + LP +++C++ ++ + A+ ETDEVYAQ+TL P QN+
Sbjct: 57 EQVAASTNKEVDGHIPNYPNLPPQLICQLHDVTMHADVETDEVYAQMTLQPLNPQEQNDA 116
Query: 59 TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
P S +P + F K LTASDTSTHGGFSV R+ A PPLD Q P QEL+A
Sbjct: 117 YLPAEMGIMSKQP-TNYFCKTLTASDTSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIA 175
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
+D+H EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ E +L +G+R
Sbjct: 176 RDIHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRHAT 235
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAV-N 235
R Q+ MPSSV+SS SMH+G+LA A+HA AT + F ++Y PR S +F+I L+KY++AV +
Sbjct: 236 RPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPTEFVIPLSKYIKAVFH 295
Query: 236 NKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPD 294
+ +VGMR++M FE E+S RR+ GT+ V D P W S WRS+KV WDE + RP
Sbjct: 296 TRISVGMRFRMLFETEESSVRRYMGTITEVSDADPVRWPSSYWRSVKVGWDESTAGERPP 355
Query: 295 RVSPWEIEPF 304
RVS WEIEP
Sbjct: 356 RVSLWEIEPL 365
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 61/97 (62%), Gaps = 4/97 (4%)
Query: 529 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 586
+ R+ KV G +VGR+LD+T Y L +EL +MF IKGQL R+ W++V+ D E
Sbjct: 716 TTRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRE 774
Query: 587 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS-PGS 622
D++L+GDDPW F N V I I S +DV KM PG+
Sbjct: 775 NDVLLLGDDPWESFVNSVWYIKILSPEDVHKMGKPGN 811
>gi|312282955|dbj|BAJ34343.1| unnamed protein product [Thellungiella halophila]
Length = 901
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 155/307 (50%), Positives = 214/307 (69%), Gaps = 6/307 (1%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEP-T 59
EQ+ ST + ++P + LPS+++C+V N+ L A++++DE+YAQ++L P S+ +
Sbjct: 79 EQVAVSTRRSATTQVPNYPNLPSQLMCQVHNVTLHADKDSDEIYAQMSLQPVHSERDVFP 138
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
PD + F K LTASDTSTHGGFSV R+ A + PPLD PTQELV +
Sbjct: 139 VPDFGLLRGSKHPTEFFCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYTAQPPTQELVVR 198
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH W F+HI+RGQP+RHLLTTGWS FV SKRL AGD+ +F+R E +L VGVR R
Sbjct: 199 DLHENTWTFRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANR 258
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NN 236
QQ+++PSSV+S+ SMH+GVLA A+HA A +T F+++Y PR ++F+I L KY +A+ +
Sbjct: 259 QQTALPSSVLSADSMHIGVLAAAAHATANRTPFLIFYNPRACPAEFVIPLAKYRKAICGS 318
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+ +VGMR+ M FE EDS +RR+ GT+VG+ D P W SKWR+L+V+WDEP +P R
Sbjct: 319 QLSVGMRFGMMFETEDSGKRRYMGTIVGISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTR 378
Query: 296 VSPWEIE 302
VSPW+IE
Sbjct: 379 VSPWDIE 385
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 59/91 (64%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 588
R+ TKVQ G +VGR++D+T+ Y+ L +E MF ++G L + W++VY D E D
Sbjct: 792 RTYTKVQKTG-SVGRSIDVTSFRDYEELKSAIECMFGLEGLLTQPQSSGWKLVYVDYESD 850
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++LVGDDPW EF V+ I I S +V++MS
Sbjct: 851 VLLVGDDPWEEFVGCVRCIRILSPTEVQQMS 881
>gi|297851462|ref|XP_002893612.1| hypothetical protein ARALYDRAFT_473256 [Arabidopsis lyrata subsp.
lyrata]
gi|297339454|gb|EFH69871.1| hypothetical protein ARALYDRAFT_473256 [Arabidopsis lyrata subsp.
lyrata]
Length = 891
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 164/328 (50%), Positives = 223/328 (67%), Gaps = 8/328 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ ASTN+E++ IP + L +++C++ N+ + A+ ETDEVYAQ+TL P +Q +
Sbjct: 53 EQVAASTNKEVDAHIPNYPSLHPQLICQLHNVTMHADVETDEVYAQMTLQPLNAQEQKDP 112
Query: 61 PDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
P P R + F K LTASDTSTHGGFSV R+ A + PPLD +Q P QEL+A+
Sbjct: 113 YLPAELGVPSRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELMAR 172
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ + +L +G+R R
Sbjct: 173 DLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANR 232
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NN 236
Q+ MPSSV+SS SMHLG+LA A+HA AT + F ++Y PR S+F+I L KY++AV +
Sbjct: 233 PQTVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHT 292
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+ +VGMR++M FE E+S RR+ GT+ G+ D P W +S WRS+KV WDE + R R
Sbjct: 293 RVSVGMRFRMLFETEESSVRRYMGTITGICDLDPSRWANSHWRSVKVGWDESTAGERQPR 352
Query: 296 VSPWEIEPFVASATPNLVQPVLAKNKRP 323
VS WEIEP + P P + KRP
Sbjct: 353 VSLWEIEPL--TTFPMYPSPFPLRLKRP 378
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 64/102 (62%), Gaps = 4/102 (3%)
Query: 521 QSKQSCLTSN-RSRTKVQM-QGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRT 576
QS ++ T N +S T V++ + + GR+LD++ Y L EL MF ++GQL R+
Sbjct: 739 QSSENLGTENPQSNTFVKVYKSGSFGRSLDISKFSSYHELRSELARMFGLEGQLEDPVRS 798
Query: 577 KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 618
W++V+ D E D++L+GDDPW EF + V I I S Q+V++M
Sbjct: 799 GWQLVFVDRENDVLLLGDDPWPEFVSSVWCIKILSPQEVQQM 840
>gi|414584845|tpg|DAA35416.1| TPA: hypothetical protein ZEAMMB73_535909 [Zea mays]
Length = 786
Score = 305 bits (780), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 160/310 (51%), Positives = 216/310 (69%), Gaps = 8/310 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP--EPSQNEP 58
EQ+ ASTN+E++ IP + LP +++C++ ++ + A+ ETDEVYAQ+TL P QN+
Sbjct: 57 EQVAASTNKEVDGHIPNYPNLPPQLICQLHDVTMHADVETDEVYAQMTLQPLNPQEQNDA 116
Query: 59 TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
P S +P + F K LTASDTSTHGGFSV R+ A PPLD Q P QEL+A
Sbjct: 117 YLPAEMGIMSKQP-TNYFCKTLTASDTSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIA 175
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
+D+H EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ E +L +G+R
Sbjct: 176 RDIHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRHAT 235
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAV-N 235
R Q+ MPSSV+SS SMH+G+LA A+HA AT + F ++Y PR S +F+I L+KY++AV +
Sbjct: 236 RPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPTEFVIPLSKYIKAVFH 295
Query: 236 NKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPD 294
+ +VGMR++M FE E+S RR+ GT+ V D P W S WRS+KV WDE + RP
Sbjct: 296 TRISVGMRFRMLFETEESSVRRYMGTITEVSDADPVRWPSSYWRSVKVGWDESTAGERPP 355
Query: 295 RVSPWEIEPF 304
RVS WEIEP
Sbjct: 356 RVSLWEIEPL 365
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 47/71 (66%), Gaps = 3/71 (4%)
Query: 529 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 586
+ R+ KV G +VGR+LD+T Y L +EL +MF IKGQL R+ W++V+ D E
Sbjct: 716 TTRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRE 774
Query: 587 GDMMLVGDDPW 597
D++L+GDDPW
Sbjct: 775 NDVLLLGDDPW 785
>gi|449528515|ref|XP_004171249.1| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 3-like
[Cucumis sativus]
Length = 730
Score = 305 bits (780), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 158/330 (47%), Positives = 214/330 (64%), Gaps = 17/330 (5%)
Query: 19 FRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKV----- 73
+ LP ILCRV+++ L AE +DEVYAQ++L PE Q E + DS V
Sbjct: 84 YDLPPHILCRVIDVQLHAEAGSDEVYAQVSLFPENEQMEHKMQEEMNNDSEEEDVEEGEK 143
Query: 74 ----HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFK 129
H F K LTASDTSTHGGFSV R+ A +C PPLD NQ P+QELVAKDL G +W+F+
Sbjct: 144 TTTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYNQQRPSQELVAKDLLGLKWKFR 203
Query: 130 HIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVI 189
HI+RGQPRRHLLTTGWS FV KRLV+GD +FLRG +GEL +G+R A+ +S S I
Sbjct: 204 HIYRGQPRRHLLTTGWSAFVNKKRLVSGDAVLFLRGNDGELRLGIRRAAQLKSGSAFSNI 263
Query: 190 SSQSMHLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMR 247
SQ ++ + +AV++++ F V Y PR +SQF++ +K+L+++N+ F+VG+R+++
Sbjct: 264 CSQQLNSSSIMDVVNAVSSKSSFSVCYNPRAASSQFVLPFHKFLKSINHSFSVGLRFRLS 323
Query: 248 FEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA 306
FE +D +RR +G + GV D P W S+WRSL V+WD+ R RVSPWEIEP +
Sbjct: 324 FETDDGADRRHTGHITGVSDVDPIRWPGSRWRSLMVRWDD-GETNRHGRVSPWEIEPSGS 382
Query: 307 -SATPNLVQPVLAKNKRPRLSMEVPPLDLP 335
S + NLV P L KR R+ + L+ P
Sbjct: 383 VSLSTNLVPPGL---KRTRIGLSSTKLEFP 409
>gi|2708484|gb|AAB92476.1| IAA24 [Arabidopsis thaliana]
Length = 890
Score = 304 bits (779), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 155/307 (50%), Positives = 215/307 (70%), Gaps = 6/307 (1%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEP-T 59
EQ+ ST + ++P + LPS+++C+V N+ L A++++DE+YAQ++L P S+ +
Sbjct: 70 EQVAVSTRRSATTQVPNYPNLPSQLMCQVHNVTLHADKDSDEIYAQMSLQPVHSERDVFP 129
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
PD + F K LTASDTSTHGGFSV R+ A + PPLD + PTQELV +
Sbjct: 130 VPDFGMLRGSKHPTEFFCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYSAQPPTQELVVR 189
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH W F+HI+RGQP+RHLLTTGWS FV SKRL AGD+ +F+R E +L VGVR R
Sbjct: 190 DLHENTWTFRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANR 249
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NN 236
QQ+++PSSV+S+ SMH+GVLA A+HA A +T F+++Y PR ++F+I L KY +A+ +
Sbjct: 250 QQTALPSSVLSADSMHIGVLAAAAHATANRTPFLIFYNPRACPAEFVIPLAKYRKAICGS 309
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+ +VGMR+ M FE EDS +RR+ GT+VG+ D P W SKWR+L+V+WDEP +P R
Sbjct: 310 QLSVGMRFGMMFETEDSGKRRYMGTIVGISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTR 369
Query: 296 VSPWEIE 302
VSPW+IE
Sbjct: 370 VSPWDIE 376
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL-HTRTK-WEIVYTDDEGD 588
R+ TKVQ G +VGR++D+T+ Y+ L +E MF ++G L H ++ W++VY D E D
Sbjct: 781 RTYTKVQKTG-SVGRSIDVTSFKDYEELKSAIECMFGLEGLLTHPQSSGWKLVYVDYESD 839
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++LVGDDPW EF V+ I I S +V++MS
Sbjct: 840 VLLVGDDPWEEFVGCVRCIRILSPTEVQQMS 870
>gi|10086486|gb|AAG12546.1|AC007797_6 IAA24 [Arabidopsis thaliana]
Length = 850
Score = 304 bits (779), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 155/307 (50%), Positives = 215/307 (70%), Gaps = 6/307 (1%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEP-T 59
EQ+ ST + ++P + LPS+++C+V N+ L A++++DE+YAQ++L P S+ +
Sbjct: 71 EQVAVSTRRSATTQVPNYPNLPSQLMCQVHNVTLHADKDSDEIYAQMSLQPVHSERDVFP 130
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
PD + F K LTASDTSTHGGFSV R+ A + PPLD + PTQELV +
Sbjct: 131 VPDFGMLRGSKHPTEFFCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYSAQPPTQELVVR 190
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH W F+HI+RGQP+RHLLTTGWS FV SKRL AGD+ +F+R E +L VGVR R
Sbjct: 191 DLHENTWTFRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANR 250
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NN 236
QQ+++PSSV+S+ SMH+GVLA A+HA A +T F+++Y PR ++F+I L KY +A+ +
Sbjct: 251 QQTALPSSVLSADSMHIGVLAAAAHATANRTPFLIFYNPRACPAEFVIPLAKYRKAICGS 310
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+ +VGMR+ M FE EDS +RR+ GT+VG+ D P W SKWR+L+V+WDEP +P R
Sbjct: 311 QLSVGMRFGMMFETEDSGKRRYMGTIVGISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTR 370
Query: 296 VSPWEIE 302
VSPW+IE
Sbjct: 371 VSPWDIE 377
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 48/69 (69%), Gaps = 3/69 (4%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL-HTRTK-WEIVYTDDEGD 588
R+ TKVQ G +VGR++D+T+ Y+ L +E MF ++G L H ++ W++VY D E D
Sbjct: 782 RTYTKVQKTG-SVGRSIDVTSFKDYEELKSAIECMFGLEGLLTHPQSSGWKLVYVDYESD 840
Query: 589 MMLVGDDPW 597
++LVGDDPW
Sbjct: 841 VLLVGDDPW 849
>gi|379323214|gb|AFD01306.1| auxin response factor 8-2 [Brassica rapa subsp. pekinensis]
Length = 844
Score = 304 bits (779), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 158/309 (51%), Positives = 218/309 (70%), Gaps = 6/309 (1%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ A+TN+E++ IP + LP +++C++ N+ + A+ ETDEVYAQ+TL P + + T
Sbjct: 50 EQVAATTNKEVDGHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPEEQKET 109
Query: 61 PDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
P P + + F K LTASDTSTHGGFSV R+ A + PPLD + P QEL+A+
Sbjct: 110 FVPIELGIPSKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSLQPPAQELLAR 169
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+R E +L +G+R R
Sbjct: 170 DLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIRNEKNQLFLGIRRATR 229
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQ--FIISLNKYLEAV-NN 236
Q+ +PSSV+SS SMH+G+LA A+HA AT + F V++ PR SQ F+I L+KY++AV +
Sbjct: 230 PQTIVPSSVLSSDSMHIGLLAAAAHASATNSCFTVFFHPRASQSEFVIQLSKYIKAVFHT 289
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDR 295
+ +VGMR++M FE E+S RR+ GT+ G+ D S W +S WRS+KV WDE + R R
Sbjct: 290 RISVGMRFRMLFETEESSVRRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPR 349
Query: 296 VSPWEIEPF 304
VS WEIEP
Sbjct: 350 VSLWEIEPL 358
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 61/94 (64%), Gaps = 3/94 (3%)
Query: 529 SNRSRTKVQM-QGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDD 585
SN+++ V++ + +VGR+LD++ Y L +EL +MF I+G L R+ W++V+ D
Sbjct: 734 SNQTKNFVKVYKSGSVGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVFVDK 793
Query: 586 EGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
E D++L+GDDPW F + V I I S +DV++M
Sbjct: 794 ENDILLLGDDPWESFVSNVWYIKILSPEDVQEMG 827
>gi|297805254|ref|XP_002870511.1| hypothetical protein ARALYDRAFT_493698 [Arabidopsis lyrata subsp.
lyrata]
gi|297316347|gb|EFH46770.1| hypothetical protein ARALYDRAFT_493698 [Arabidopsis lyrata subsp.
lyrata]
Length = 805
Score = 304 bits (779), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 158/309 (51%), Positives = 217/309 (70%), Gaps = 6/309 (1%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ A+TN+E++ IP + LP +++C++ N+ + A+ ETDEVYAQ+TL P + + T
Sbjct: 50 EQVAATTNKEVDGHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPEEQKET 109
Query: 61 PDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
P P + + F K LTASDTSTHGGFSV R+ A + PPLD P QEL+A+
Sbjct: 110 FVPIELGIPSKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYTLQPPAQELIAR 169
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+R E +L +G+R R
Sbjct: 170 DLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIRNEKNQLFLGIRHATR 229
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQ--FIISLNKYLEAV-NN 236
Q+ +PSSV+SS SMH+G+LA A+HA AT + F V++ PR SQ F+I L+KY++AV +
Sbjct: 230 PQTIVPSSVLSSDSMHIGLLAAAAHASATNSCFTVFFHPRASQSEFVIQLSKYIKAVFHT 289
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDR 295
+ +VGMR++M FE E+S RR+ GT+ G+ D S W +S WRS+KV WDE + R R
Sbjct: 290 RISVGMRFRMLFETEESSVRRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPR 349
Query: 296 VSPWEIEPF 304
VS WEIEP
Sbjct: 350 VSLWEIEPL 358
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 58/94 (61%), Gaps = 3/94 (3%)
Query: 528 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDD 585
T ++ KV G +VGR+LD++ Y L +EL +MF I+G L R+ W++V+ D
Sbjct: 696 TQTKNFVKVYKSG-SVGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVFVDK 754
Query: 586 EGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
E D++L+GDDPW F N V I I S +DV++M
Sbjct: 755 ENDILLLGDDPWESFVNNVWYIKILSPEDVQQMG 788
>gi|449433792|ref|XP_004134681.1| PREDICTED: auxin response factor 3-like [Cucumis sativus]
Length = 731
Score = 304 bits (779), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 158/330 (47%), Positives = 214/330 (64%), Gaps = 17/330 (5%)
Query: 19 FRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKV----- 73
+ LP ILCRV+++ L AE +DEVYAQ++L PE Q E + DS V
Sbjct: 84 YDLPPHILCRVIDVQLHAEAGSDEVYAQVSLFPENEQMEHKMQEEMNNDSEEEDVEEGEK 143
Query: 74 ----HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFK 129
H F K LTASDTSTHGGFSV R+ A +C PPLD NQ P+QELVAKDL G +W+F+
Sbjct: 144 TTTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYNQQRPSQELVAKDLLGLKWKFR 203
Query: 130 HIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVI 189
HI+RGQPRRHLLTTGWS FV KRLV+GD +FLRG +GEL +G+R A+ +S S I
Sbjct: 204 HIYRGQPRRHLLTTGWSAFVNKKRLVSGDAVLFLRGNDGELRLGIRRAAQLKSGSAFSNI 263
Query: 190 SSQSMHLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMR 247
SQ ++ + +AV++++ F V Y PR +SQF++ +K+L+++N+ F+VG+R+++
Sbjct: 264 CSQQLNSSSIMDVVNAVSSKSSFSVCYNPRAASSQFVLPFHKFLKSINHSFSVGLRFRLS 323
Query: 248 FEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA 306
FE +D +RR +G + GV D P W S+WRSL V+WD+ R RVSPWEIEP +
Sbjct: 324 FETDDGADRRHTGHITGVSDVDPIRWPGSRWRSLMVRWDD-GETNRHGRVSPWEIEPSGS 382
Query: 307 -SATPNLVQPVLAKNKRPRLSMEVPPLDLP 335
S + NLV P L KR R+ + L+ P
Sbjct: 383 VSLSTNLVPPGL---KRTRIGLSSTKLEFP 409
>gi|79318949|ref|NP_001031115.1| auxin response factor 6 [Arabidopsis thaliana]
gi|238054274|sp|Q9ZTX8.2|ARFF_ARATH RecName: Full=Auxin response factor 6
gi|49616351|gb|AAT67072.1| ARF6 [Arabidopsis thaliana]
gi|332193086|gb|AEE31207.1| auxin response factor 6 [Arabidopsis thaliana]
Length = 935
Score = 304 bits (779), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 164/328 (50%), Positives = 223/328 (67%), Gaps = 8/328 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ ASTN+E++ IP + L +++C++ N+ + A+ ETDEVYAQ+TL P +Q +
Sbjct: 53 EQVAASTNKEVDAHIPNYPSLHPQLICQLHNVTMHADVETDEVYAQMTLQPLNAQEQKDP 112
Query: 61 PDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
P P R + F K LTASDTSTHGGFSV R+ A + PPLD +Q P QEL+A+
Sbjct: 113 YLPAELGVPSRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELMAR 172
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ + +L +G+R R
Sbjct: 173 DLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANR 232
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NN 236
Q+ MPSSV+SS SMHLG+LA A+HA AT + F ++Y PR S+F+I L KY++AV +
Sbjct: 233 PQTVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHT 292
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+ +VGMR++M FE E+S RR+ GT+ G+ D P W +S WRS+KV WDE + R R
Sbjct: 293 RVSVGMRFRMLFETEESSVRRYMGTITGICDLDPTRWANSHWRSVKVGWDESTAGERQPR 352
Query: 296 VSPWEIEPFVASATPNLVQPVLAKNKRP 323
VS WEIEP + P P + KRP
Sbjct: 353 VSLWEIEPL--TTFPMYPSPFPLRLKRP 378
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 54/87 (62%), Gaps = 3/87 (3%)
Query: 534 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMML 591
KV G + GR+LD++ Y L EL MF ++GQL R+ W++V+ D E D++L
Sbjct: 799 VKVYKSG-SFGRSLDISKFSSYHELRSELARMFGLEGQLEDPVRSGWQLVFVDRENDVLL 857
Query: 592 VGDDPWHEFCNMVKRIFICSSQDVKKM 618
+GDDPW EF + V I I S Q+V++M
Sbjct: 858 LGDDPWPEFVSSVWCIKILSPQEVQQM 884
>gi|15220728|ref|NP_174323.1| auxin response factor 6 [Arabidopsis thaliana]
gi|12322119|gb|AAG51093.1|AC025295_1 auxin response factor 6 (ARF6) [Arabidopsis thaliana]
gi|4102600|gb|AAD01513.1| ARF6 [Arabidopsis thaliana]
gi|332193085|gb|AEE31206.1| auxin response factor 6 [Arabidopsis thaliana]
Length = 933
Score = 304 bits (779), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 164/328 (50%), Positives = 223/328 (67%), Gaps = 8/328 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ ASTN+E++ IP + L +++C++ N+ + A+ ETDEVYAQ+TL P +Q +
Sbjct: 51 EQVAASTNKEVDAHIPNYPSLHPQLICQLHNVTMHADVETDEVYAQMTLQPLNAQEQKDP 110
Query: 61 PDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
P P R + F K LTASDTSTHGGFSV R+ A + PPLD +Q P QEL+A+
Sbjct: 111 YLPAELGVPSRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELMAR 170
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ + +L +G+R R
Sbjct: 171 DLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANR 230
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NN 236
Q+ MPSSV+SS SMHLG+LA A+HA AT + F ++Y PR S+F+I L KY++AV +
Sbjct: 231 PQTVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHT 290
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+ +VGMR++M FE E+S RR+ GT+ G+ D P W +S WRS+KV WDE + R R
Sbjct: 291 RVSVGMRFRMLFETEESSVRRYMGTITGICDLDPTRWANSHWRSVKVGWDESTAGERQPR 350
Query: 296 VSPWEIEPFVASATPNLVQPVLAKNKRP 323
VS WEIEP + P P + KRP
Sbjct: 351 VSLWEIEPL--TTFPMYPSPFPLRLKRP 376
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 54/87 (62%), Gaps = 3/87 (3%)
Query: 534 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMML 591
KV G + GR+LD++ Y L EL MF ++GQL R+ W++V+ D E D++L
Sbjct: 797 VKVYKSG-SFGRSLDISKFSSYHELRSELARMFGLEGQLEDPVRSGWQLVFVDRENDVLL 855
Query: 592 VGDDPWHEFCNMVKRIFICSSQDVKKM 618
+GDDPW EF + V I I S Q+V++M
Sbjct: 856 LGDDPWPEFVSSVWCIKILSPQEVQQM 882
>gi|356548656|ref|XP_003542716.1| PREDICTED: auxin response factor 3-like [Glycine max]
Length = 714
Score = 304 bits (779), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 152/328 (46%), Positives = 214/328 (65%), Gaps = 16/328 (4%)
Query: 21 LPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQ-NEPTTPDPCPADSPRPKV------ 73
+PS + CRV+++ L AE+ +DEVY Q+ L+PE Q + AD
Sbjct: 75 IPSHVFCRVLDVKLHAEEGSDEVYCQVVLVPESEQVQQKLREGEFDADGEEEDAEAVMKS 134
Query: 74 ---HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKH 130
H F K LTASDTSTHGGFSV R+ A +C PPLD +Q P+QELVAKDLHG EWRF+H
Sbjct: 135 TTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGQEWRFRH 194
Query: 131 IFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVIS 190
I+RGQPRRHLLTTGWS FV K+LV+GD +FLRGE+GEL +G+R A+ +S S +S
Sbjct: 195 IYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGELRLGIRRAAQLKSGSTFSALS 254
Query: 191 SQSMHLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRF 248
Q L +A++ + F ++Y PR +S+FII +++++++++ ++ GMR++MRF
Sbjct: 255 GQQGSPTSLMDVVNALSARCAFSIHYNPRVSSSEFIIPIHRFVKSLDYSYSAGMRFRMRF 314
Query: 249 EGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVAS 307
E ED+ ERRF+G +VG+ D P W S+WR L V+WD+ TR +RVSPWEIEP ++
Sbjct: 315 ETEDAAERRFTGLIVGIADVDPVRWPGSRWRCLMVRWDD-LEATRHNRVSPWEIEPSGSA 373
Query: 308 ATPNLVQPVLAKNKRPRLSMEVPPLDLP 335
+T N + + A KR ++ + LD P
Sbjct: 374 STANNL--MSAGLKRTKIGLPSAKLDFP 399
>gi|15239335|ref|NP_200853.1| auxin response factor 4 [Arabidopsis thaliana]
gi|46396060|sp|Q9ZTX9.1|ARFD_ARATH RecName: Full=Auxin response factor 4
gi|12744969|gb|AAK06864.1|AF344313_1 auxin response factor 4 [Arabidopsis thaliana]
gi|4102598|gb|AAD01512.1| auxin response factor 4 [Arabidopsis thaliana]
gi|9757747|dbj|BAB08228.1| auxin response factor 4 [Arabidopsis thaliana]
gi|19424051|gb|AAL87308.1| auxin response factor ARF4 [Arabidopsis thaliana]
gi|21280887|gb|AAM45025.1| auxin response factor ARF4 [Arabidopsis thaliana]
gi|332009949|gb|AED97332.1| auxin response factor 4 [Arabidopsis thaliana]
Length = 788
Score = 304 bits (779), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 156/330 (47%), Positives = 210/330 (63%), Gaps = 33/330 (10%)
Query: 16 IPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLP-------------------EPSQN 56
IP F L +I+CRVVN+ L+A ++TDEVY Q+TLLP E +N
Sbjct: 106 IPKFDLNPQIVCRVVNVQLLANKDTDEVYTQVTLLPLQEFSMLNGEGKEVKELGGEEERN 165
Query: 57 EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQEL 116
++ P H F K LTASDTSTHGGFSV R+ A +C PLD Q P+QEL
Sbjct: 166 GSSSVKRTP--------HMFCKTLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQEL 217
Query: 117 VAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRC 176
+AKDLHG EW+F+HI+RGQPRRHLLTTGWS FV+ K LV+GD +FLR E GEL +G+R
Sbjct: 218 IAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRDEGGELRLGIRR 277
Query: 177 LARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV 234
AR ++ +P S+I S +L+ ++AV+T++MF V+Y PR ++F+I KY+ ++
Sbjct: 278 AARPRNGLPDSIIEKNSCS-NILSLVANAVSTKSMFHVFYSPRATHAEFVIPYEKYITSI 336
Query: 235 NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRP 293
+ +G R++MRFE +DSPERR +G V GV D P+ W +SKWR L V+WDE
Sbjct: 337 RSPVCIGTRFRMRFEMDDSPERRCAGVVTGVCDLDPYRWPNSKWRCLLVRWDESFVSDHQ 396
Query: 294 DRVSPWEIEPFVASATPNLVQPVLAKNKRP 323
+RVSPWEI+P V + P+L + KRP
Sbjct: 397 ERVSPWEIDPSV--SLPHLSIQSSPRPKRP 424
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 73/108 (67%), Gaps = 1/108 (0%)
Query: 517 PKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRT 576
P E+ + + +S R TKV QG VGRA+DL+ L GYD L+ ELE +F+++G L
Sbjct: 651 PVETPASKPQSSSKRICTKVHKQGSQVGRAIDLSRLNGYDDLLMELERLFNMEGLLRDPE 710
Query: 577 K-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSK 623
K W I+YTD E DMM+VGDDPWH+FCN+V +I + + ++V+ + +K
Sbjct: 711 KGWRILYTDSENDMMVVGDDPWHDFCNVVWKIHLYTKEEVENANDDNK 758
>gi|118486652|gb|ABK95163.1| unknown [Populus trichocarpa]
Length = 907
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 159/311 (51%), Positives = 220/311 (70%), Gaps = 9/311 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ ASTN+E++ IP + LP +++C++ N+ + A+ ETDEVYAQ+TL P SQ++
Sbjct: 55 EQVAASTNKEVDAHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPL-SQDDQKD 113
Query: 61 PDPCPAD---SPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELV 117
PA+ + + + F K LTASDTSTHGGFSV R+ A + P LD +Q+ P QEL+
Sbjct: 114 AYLLPAELGTASKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPTLDYSQTPPAQELI 173
Query: 118 AKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCL 177
A+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ E +L +G+R
Sbjct: 174 ARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA 233
Query: 178 ARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV- 234
R Q+ MPSSV+SS SMH+G+LA A+HA AT + F ++Y PR S+F+I L KY++AV
Sbjct: 234 NRPQTFMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLVKYIKAVY 293
Query: 235 NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRP 293
+ + +VGMR++M FE E+S RR+ GT+ G+ D P W +S WRS+KV WDE + R
Sbjct: 294 HTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQ 353
Query: 294 DRVSPWEIEPF 304
RVS WEIEP
Sbjct: 354 PRVSLWEIEPL 364
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 61/104 (58%), Gaps = 8/104 (7%)
Query: 529 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDE 586
S R+ KV G + GR+LD++ YD L EL +F ++G L R+ W++V+ D E
Sbjct: 772 STRTFVKVHKSG-SYGRSLDISKFSSYDELRSELARLFCLEGLLEDPQRSGWQLVFGDRE 830
Query: 587 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM-----SPGSKLP 625
D++L+GDDPW EF N V I I S +V++M SP + +P
Sbjct: 831 NDVLLLGDDPWQEFVNNVWYIKILSPLEVQQMGKEGLSPAASVP 874
>gi|168042037|ref|XP_001773496.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675198|gb|EDQ61696.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1103
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 174/366 (47%), Positives = 225/366 (61%), Gaps = 40/366 (10%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHL---------------MAEQETDEVYA 45
EQ+ AST +E IP + LPS+++C + N+ L A+ ETDEVYA
Sbjct: 105 EQVAASTQREAETHIPNYPSLPSRLVCLLDNVTLHVSDRYSMSLIDVVIQADLETDEVYA 164
Query: 46 QITLLPEPSQNEP-TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPP 104
Q+TL+P P NE P R F K LTASDTSTHGGFS+ R+ A + PP
Sbjct: 165 QMTLIPVPPANEKEALMSPDIGIRSRQPTDYFCKTLTASDTSTHGGFSIPRRAAEKVFPP 224
Query: 105 LDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLR 164
LD +Q+ P QEL A+DLH EW F+HI+RGQPRRHLLTTGWS FV++KRL AGD +F+R
Sbjct: 225 LDYSQTPPAQELKARDLHDQEWHFRHIYRGQPRRHLLTTGWSVFVSAKRLQAGDAVLFIR 284
Query: 165 GENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQ 222
+ G+L +G+R RQQ+ MPSSV+SS SMH+GVLA A+HA AT + F ++Y PR S+
Sbjct: 285 DDKGQLQLGIRRQNRQQTVMPSSVLSSDSMHIGVLAAANHAAATSSRFTIFYNPRQSPSE 344
Query: 223 FIISLNKYLEAVNN-KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSL 280
F+I + KY +A+ N + +VGMR++M FE E+S RR+ GT+ G+ D P W +S WRSL
Sbjct: 345 FVIPVAKYQKAICNLQVSVGMRFRMVFETEESSVRRYMGTITGMGDLDPIRWPNSHWRSL 404
Query: 281 KVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASA 340
KV WDE + R RVS WEIEP TP L+ P PPL A
Sbjct: 405 KVGWDESTAGERQRRVSLWEIEPLT---TPFLLCP--------------PPLTF--RAKR 445
Query: 341 PWSARL 346
PW R+
Sbjct: 446 PWGGRV 451
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 59/93 (63%), Gaps = 3/93 (3%)
Query: 529 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDE 586
++R+ TKV G +VGR++D+ Y L EL +F+++G L R+ W++V+ D+E
Sbjct: 809 TSRTFTKVHKLG-SVGRSIDVQKFQNYSELRVELARLFNLEGLLDDPQRSGWQLVFVDNE 867
Query: 587 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
D +LVGDDPW EF N V+ I I S ++ +MS
Sbjct: 868 NDTLLVGDDPWEEFVNCVRSIKILSPNEILQMS 900
>gi|350539842|ref|NP_001234545.1| auxin response factor 5 [Solanum lycopersicum]
gi|300253180|gb|ADJ96592.1| auxin response factor 5 [Solanum lycopersicum]
gi|310697420|gb|ADP06665.1| auxin response factor 5 [Solanum lycopersicum]
Length = 930
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 157/309 (50%), Positives = 214/309 (69%), Gaps = 11/309 (3%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ STN+ +IP + L S++LC+V N+ L A++ETDE+YAQ++L P S+ +
Sbjct: 72 EQVAVSTNRTATSQIPNYPNLASQLLCQVHNVTLHADKETDEIYAQMSLQPVNSEKDVF- 130
Query: 61 PDPCPADSPRPKVHS---FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELV 117
P P +P H F K LTASDTSTHGGFSV R+ A + PPLD + PTQELV
Sbjct: 131 --PIPDFGLKPNKHPTEFFCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYSMQPPTQELV 188
Query: 118 AKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCL 177
+DLH W F+HI+RGQP+RHLLTTGWS FV +KRL AGD+ +F+R E +L +GVR
Sbjct: 189 VRDLHDNTWTFRHIYRGQPKRHLLTTGWSMFVGAKRLRAGDSVLFIRDEKSQLLLGVRRA 248
Query: 178 ARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV- 234
RQQ+S+PSSV+S+ SMH+GVLA A+HA A ++ F ++Y PR S+F+I L K+ ++V
Sbjct: 249 NRQQTSLPSSVLSADSMHIGVLAAAAHAAANRSTFTIFYNPRACPSEFVIPLAKFRKSVY 308
Query: 235 NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRP 293
N + +VGMR+ M FE E+S +RR+ GT+ G+ D P W SKWR L+V+WDEP +
Sbjct: 309 NTQLSVGMRFGMMFETEESGKRRYMGTISGISDLDPLRWPGSKWRCLQVEWDEPGCGDKQ 368
Query: 294 DRVSPWEIE 302
+RVSPWE+E
Sbjct: 369 NRVSPWEVE 377
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 61/90 (67%), Gaps = 3/90 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH-TR-TKWEIVYTDDEGD 588
R+ TK+Q G +VGR++D++ Y+ L E+E MF ++G L+ TR + W++VY D E D
Sbjct: 817 RTYTKIQKTG-SVGRSIDVSGFKNYEELRSEIERMFGLEGLLNDTRGSSWKLVYVDFEND 875
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKM 618
++LVGDDPW EF V+ I I S +V++M
Sbjct: 876 VLLVGDDPWEEFVGCVRCIRILSPTEVQQM 905
>gi|297740441|emb|CBI30623.3| unnamed protein product [Vitis vinifera]
Length = 701
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 147/297 (49%), Positives = 198/297 (66%), Gaps = 14/297 (4%)
Query: 19 FRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPK------ 72
+ LP + CRVV++ L AE TDEVYAQ++L+PE + AD +
Sbjct: 84 YDLPPHVFCRVVDVKLHAEVVTDEVYAQVSLVPETKIKQKLQEGEIEADGGEEEDIEGSI 143
Query: 73 ----VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRF 128
H F K LTASDTSTHGGFSV R+ A +C PPLD Q P+QELVAKDLHG+EWRF
Sbjct: 144 KSMTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGFEWRF 203
Query: 129 KHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSV 188
+HI+RGQPRRHLLTTGWS FV K+LV+GD +FLRG +GEL +G+R A+ + S P
Sbjct: 204 RHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGGDGELRLGIRRAAQIKGSSPFPA 263
Query: 189 ISSQSMHLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKM 246
+ SQ ++L L +A++T+++F + Y PR +S+FII L K+ +++++ F+ GMR+KM
Sbjct: 264 LCSQQLNLNTLTAVVNAISTRSVFNICYNPRASSSEFIIPLRKFSKSIDHSFSAGMRFKM 323
Query: 247 RFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 302
R E ED+ ERR++G + G+ D P W SKWR L V+WD+ R +RVSPWEIE
Sbjct: 324 RVETEDAAERRYTGLITGISDMDPVRWPGSKWRCLLVRWDD-IEANRHNRVSPWEIE 379
>gi|297796993|ref|XP_002866381.1| hypothetical protein ARALYDRAFT_496192 [Arabidopsis lyrata subsp.
lyrata]
gi|297312216|gb|EFH42640.1| hypothetical protein ARALYDRAFT_496192 [Arabidopsis lyrata subsp.
lyrata]
Length = 791
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 155/326 (47%), Positives = 207/326 (63%), Gaps = 25/326 (7%)
Query: 16 IPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLP---------------EPSQNEPTT 60
IP F L +I CRVV++ L+A +ETDEVY Q+TLLP E +E
Sbjct: 101 IPKFDLNPQIFCRVVHVQLLANKETDEVYTQVTLLPLQEFSMLNTEGKEVKELGGDEERN 160
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
+P H F K LTASDTSTHGGFSV R+ A +C PLD Q P+QEL+AKD
Sbjct: 161 VSSSVKRTP----HMFCKTLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKD 216
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
LHG EW+F+HI+RGQPRRHLLTTGWS FV+ K L +GD +FLR E GEL +G+R AR
Sbjct: 217 LHGVEWKFRHIYRGQPRRHLLTTGWSIFVSQKNLASGDAVLFLRDEGGELRLGIRRAARP 276
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKF 238
++ +P S+I S +L+ ++AV+T++MF V+Y PR ++F+I KY+ ++ N
Sbjct: 277 RNGLPDSIIEKNSCS-NILSLLANAVSTKSMFHVFYSPRATHAEFVIPYEKYITSIRNPI 335
Query: 239 AVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVS 297
+G R++MRFE +DSPERR +G V GV D P+ W +SKWR L V+WDE +RVS
Sbjct: 336 CIGTRFRMRFEMDDSPERRCAGVVTGVCDLDPYRWPNSKWRCLLVRWDESFVSDHQERVS 395
Query: 298 PWEIEPFVASATPNLVQPVLAKNKRP 323
PWEI+P + + P+L + KRP
Sbjct: 396 PWEIDPSI--SLPHLSIQSSPRPKRP 419
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 72/108 (66%), Gaps = 1/108 (0%)
Query: 517 PKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRT 576
P E+ + +S R TKV QG VGRA+DL+ L GYD L+ ELE +F+++G L
Sbjct: 654 PVETPASNPQSSSKRICTKVHKQGSQVGRAIDLSRLNGYDDLLTELERLFNMEGLLRDPE 713
Query: 577 K-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSK 623
K W I+YTD E DMM+VGDDPWH+FCN+V +I + + ++V+ + +K
Sbjct: 714 KGWRILYTDSENDMMVVGDDPWHDFCNVVWKIHLYTKEEVENANDDNK 761
>gi|168028300|ref|XP_001766666.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682098|gb|EDQ68519.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 369
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 164/331 (49%), Positives = 215/331 (64%), Gaps = 11/331 (3%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ ST +E + IP + L ++C + NI L A+ ETDEVYAQ+ L+P ++ T
Sbjct: 32 EQVAVSTQKEADTHIPNYPNLRPHLVCTLDNITLHADLETDEVYAQMVLIPSQDPDKETM 91
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
P + F K LTASDTSTHGGFS+ R+ A + P LD NQ P QELVA+D
Sbjct: 92 LLPDAVVQNKQPTEYFCKTLTASDTSTHGGFSIPRRAAEKVFPTLDYNQQPPAQELVARD 151
Query: 121 LHGYEWRFKHIFR-GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
LH +W F+HI+R GQPRRHLLTTGWS FV++KRL AGD +F+R + G+L +G+R R
Sbjct: 152 LHDQDWHFRHIYRAGQPRRHLLTTGWSVFVSAKRLQAGDAVLFIRDDKGQLLLGIRRANR 211
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NN 236
Q+ MPSSV+SS SMH+G+LA ASHA T + F ++Y PR S+F+I L KY +AV +
Sbjct: 212 LQTMMPSSVLSSDSMHIGILAAASHAAQTSSRFTIFYNPRQSPSEFVIPLAKYQKAVYST 271
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+ VGMR++M FE E+S RR+ GTV G+ D P W +S WRSLKV WDE + R R
Sbjct: 272 QVTVGMRFRMVFETEESTVRRYMGTVTGIGDLDPVRWPNSHWRSLKVGWDESTAGERQRR 331
Query: 296 VSPWEIEPFVASATPNLV--QPVLAKNKRPR 324
VS WEIEP TP L P+ +++KR R
Sbjct: 332 VSLWEIEPLT---TPFLSCPPPLASRSKRAR 359
>gi|301793213|emb|CBA11997.1| putative auxin response factor 6, partial [Cabomba aquatica]
Length = 856
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 161/322 (50%), Positives = 218/322 (67%), Gaps = 8/322 (2%)
Query: 8 TNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPA 66
TN+E++ IP + LP +++C++ ++ + A+ ETDEVYAQ+TL P Q + P
Sbjct: 1 TNKEVDTHIPNYPSLPPQLICQLHDVIMHADAETDEVYAQMTLQPLTLQEQKDAYLPAEL 60
Query: 67 DSP-RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYE 125
+P R + F K LTASDTSTHGGFSV R+ A + PPLD Q P+QEL+A+DLHG E
Sbjct: 61 GTPSRQPTNYFCKRLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPSQELIARDLHGNE 120
Query: 126 WRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMP 185
W+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD +F+ E +L +G+R R QS MP
Sbjct: 121 WKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDAVIFIWNEKNQLLLGIRRGNRPQSVMP 180
Query: 186 SSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGM 242
SSV+SS SMH+G+LA A+HA AT + F V+Y PR S+F+I L +Y +AV + + +VGM
Sbjct: 181 SSVLSSDSMHIGLLAAAAHAAATNSRFTVFYXPRASPSEFVIPLTRYAKAVFHTRISVGM 240
Query: 243 RYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEI 301
R++M FE E+S RR+ GT+ G+ D P W +S WRS+KV WDE + R RVS WEI
Sbjct: 241 RFRMLFETEESSVRRYMGTITGICDLDPARWPNSHWRSIKVGWDESTAGERQPRVSLWEI 300
Query: 302 EPFVASATPNLVQPVLAKNKRP 323
EP + P P + +RP
Sbjct: 301 EPL--TTFPMYPSPFPLRLRRP 320
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 57/91 (62%), Gaps = 3/91 (3%)
Query: 530 NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEG 587
+R+ KV G + GR+LD+T Y L EL MF ++GQL R+ W++V+ D E
Sbjct: 722 DRTFVKVHKLG-SYGRSLDITNFSSYHELRSELASMFGLEGQLEDPLRSGWQLVFVDREN 780
Query: 588 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 618
D++L+GDDPW EF N V I I S Q+V++M
Sbjct: 781 DVLLLGDDPWQEFVNNVWCIKILSPQEVQQM 811
>gi|297844950|ref|XP_002890356.1| hypothetical protein ARALYDRAFT_472210 [Arabidopsis lyrata subsp.
lyrata]
gi|297336198|gb|EFH66615.1| hypothetical protein ARALYDRAFT_472210 [Arabidopsis lyrata subsp.
lyrata]
Length = 903
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 157/310 (50%), Positives = 215/310 (69%), Gaps = 11/310 (3%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ ST + ++P + LPS+++C+V N+ L A++++DE+YAQ++L P S+ +
Sbjct: 82 EQVAVSTRRSATTQVPNYPNLPSQLMCQVHNVTLHADKDSDEIYAQMSLQPVHSERD-VF 140
Query: 61 PDP----CPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQEL 116
P P S P F K LTASDTSTHGGFSV R+ A + PPLD PTQEL
Sbjct: 141 PVPDFGMLRGGSKHP-TEFFCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYTAQPPTQEL 199
Query: 117 VAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRC 176
V +DLH W F+HI+RGQP+RHLLTTGWS FV SKRL AGD+ +F+R E +L VGVR
Sbjct: 200 VVRDLHENTWTFRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRR 259
Query: 177 LARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV 234
RQQ+++PSSV+S+ SMH+GVLA A+HA A +T F+++Y PR ++F+I L KY +A+
Sbjct: 260 ANRQQTALPSSVLSADSMHIGVLAAAAHATANRTPFLIFYNPRACPAEFVIPLAKYRKAI 319
Query: 235 -NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITR 292
++ +VGMR+ M FE EDS +RR+ GT+VG+ D P W SKWR+L+V+WDEP +
Sbjct: 320 CGSQLSVGMRFGMMFETEDSGKRRYMGTIVGISDLDPLRWPGSKWRNLQVEWDEPGCNDK 379
Query: 293 PDRVSPWEIE 302
P RVSPW+IE
Sbjct: 380 PTRVSPWDIE 389
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 588
R+ TKVQ G +VGR++D+T+ Y L +E MF ++G L + W++VY D E D
Sbjct: 794 RTYTKVQKTG-SVGRSIDVTSFKDYKELKSAIECMFGLEGLLTQPQSSGWKLVYVDYESD 852
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++LVGDDPW EF V+ I I S +V++MS
Sbjct: 853 VLLVGDDPWEEFVGCVRCIRILSPTEVQQMS 883
>gi|297738133|emb|CBI27334.3| unnamed protein product [Vitis vinifera]
Length = 486
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 159/310 (51%), Positives = 218/310 (70%), Gaps = 7/310 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ A+TN+E++ IP + LP +++C++ N+ + A+ ETDEVYAQ+TL P Q + T
Sbjct: 52 EQVAATTNKEVDGHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPQEQKDT 111
Query: 61 PDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
P P + + F K LTASDTSTHGGFSV R+ A + PPLD +Q P QEL+A+
Sbjct: 112 FLPVELGIPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIAR 171
Query: 120 DLHGYEWRFKHIFRG-QPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
DLH EW+F+HIFRG QP+RHLLTTGWS FV++KRLVAGD+ +F+ E +L +G+R
Sbjct: 172 DLHDVEWKFRHIFRGRQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAT 231
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-N 235
R Q+ MPSSV+SS SMH+G+LA A+HA AT + F ++Y PR S+F+I L+KY++AV +
Sbjct: 232 RPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTIFYNPRASPSEFVIPLSKYVKAVFH 291
Query: 236 NKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPD 294
+ +VGMR++M FE E+S RR+ GT+ G+ D P W +S WRS+KV WDE + R
Sbjct: 292 TRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQP 351
Query: 295 RVSPWEIEPF 304
RVS WEIEP
Sbjct: 352 RVSLWEIEPL 361
>gi|301793215|emb|CBA11998.1| putative auxin response factor 8, partial [Cabomba aquatica]
Length = 795
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 165/337 (48%), Positives = 226/337 (67%), Gaps = 9/337 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ ASTN+E+ +P + LP +++C++ ++ + A+ ETDEVYAQ+TL P Q +
Sbjct: 41 EQVAASTNREVTDHVPNYPGLPPQLICQLHDVTMHADAETDEVYAQMTLQPLSPQEQKDA 100
Query: 61 PDPCPADSPRPK-VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
P P + + F K LTASDTSTHGGFSV R+ A + PPLD +Q P+QEL+A+
Sbjct: 101 FLPAELGIPTNQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPSQELIAR 160
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRLV GD+ +F+ E +L +G+R AR
Sbjct: 161 DLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVTGDSVIFIWNEKNQLLLGIRRAAR 220
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NN 236
Q+ MP SV+SS SMH+G+LA A+HA AT + F V+Y PR S+F+ISL KY++AV
Sbjct: 221 PQTVMPYSVLSSDSMHIGLLAAAAHAAATNSRFTVFYNPRASPSEFVISLVKYIKAVFQT 280
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+ +VGMR++M FE E+S RR+ GT+ + D P W +S WRS+KV WDE + R R
Sbjct: 281 RVSVGMRFRMLFETEESSVRRYMGTITSISDLDPVRWANSHWRSVKVGWDESTAGIRQPR 340
Query: 296 VSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPL 332
VS WEIEP + P+ + KRP L E+ PL
Sbjct: 341 VSLWEIEPLTTFPMYPSLFPL--RLKRPWLP-EMSPL 374
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 3/87 (3%)
Query: 534 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMML 591
KV G VGR+LD+ Y+ L DEL +MF ++G L R+ W++V D E D++L
Sbjct: 689 VKVYKSG-CVGRSLDIARFSSYNELRDELCQMFGLEGLLEDPQRSGWQLVLVDRENDILL 747
Query: 592 VGDDPWHEFCNMVKRIFICSSQDVKKM 618
+GDDPW F N V I I S QDV++M
Sbjct: 748 MGDDPWEAFVNSVWSIKILSPQDVQQM 774
>gi|225030808|gb|ACN79517.1| auxin response factor 4 [Lotus japonicus]
Length = 771
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 157/340 (46%), Positives = 215/340 (63%), Gaps = 36/340 (10%)
Query: 16 IPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLP---------EPSQNEPTTPD---- 62
+P + L +I C+V N+ L+A +E DEVY Q+TLLP E + E D
Sbjct: 85 VPTYDLHPQIFCKVANVQLLANKENDEVYTQVTLLPQAELEGIYLEGKELEGVGEDVEGN 144
Query: 63 -PCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDL 121
PA S H F K LTASDTSTHGGFSV R+ A +C PPL P+QELVAKDL
Sbjct: 145 GKTPAKS---TPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLQ----RPSQELVAKDL 197
Query: 122 HGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQ 181
HG EW+F+HI+RGQPRRHLLTTGWS FV+ K+LV+GD +FLRGENGEL +G+R AR +
Sbjct: 198 HGVEWKFRHIYRGQPRRHLLTTGWSIFVSQKKLVSGDAVLFLRGENGELRLGIRRAARPR 257
Query: 182 SSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFA 239
+ +P S++ +QS + L++ ++A++ ++MF V+Y PR S F++ +KY+ ++ N
Sbjct: 258 NGLPESIVGNQSCYPNFLSSVANAISARSMFHVFYSPRASHADFVVPYHKYVRSIKNPVT 317
Query: 240 VGMRYKMRFEGEDSPERRF----------SGTVVGVEDFSPH-WKDSKWRSLKVQWDEPA 288
VG R+KM+F+ ++SPERR SG V G+ D P+ W SKWR L V+WDE
Sbjct: 318 VGTRFKMKFDMDESPERRSTTAVTINRCSSGIVTGMSDLDPYKWPKSKWRCLMVRWDEIV 377
Query: 289 SITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSME 328
DRVSPWE++P AS +P +Q + K+PR +E
Sbjct: 378 ETNHQDRVSPWEVDP-SASLSPLSIQ-ASRRLKKPRTDLE 415
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/104 (50%), Positives = 72/104 (69%), Gaps = 1/104 (0%)
Query: 519 ESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK- 577
ES S+ T+ RS TKV QG VGRA+DL+ L Y+ L+ ELE +F ++G L K
Sbjct: 631 ESTSQNLQNTAKRSCTKVHKQGSLVGRAIDLSRLSSYNDLLSELERLFSMEGLLREPDKG 690
Query: 578 WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPG 621
W ++YTD E D+M+VGDDPWHEFCN+V +I I + ++V+KM+ G
Sbjct: 691 WRVLYTDRENDIMVVGDDPWHEFCNVVSKIHIYTQEEVEKMTIG 734
>gi|356549269|ref|XP_003543018.1| PREDICTED: auxin response factor 3-like [Glycine max]
Length = 736
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 157/332 (47%), Positives = 217/332 (65%), Gaps = 18/332 (5%)
Query: 19 FRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDP-CPADSPRPKV---- 73
+ +P + CRV+++ L AE+ +DEVY Q+ L+PE Q E + + AD
Sbjct: 91 YDIPPHVFCRVLDVKLHAEEGSDEVYCQVLLVPESEQVEQSLREGEIVADGEEEDTEAIV 150
Query: 74 -----HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRF 128
H F K LTASDTSTHGGFSV R+ A +C PPLD +Q P+QELVAKDLHG EWRF
Sbjct: 151 KSTTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGLEWRF 210
Query: 129 KHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSV 188
+HI+RGQPRRHLLTTGWS FV K+LV+GD +FLRG++GEL +G+R A+ +S+ +V
Sbjct: 211 RHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGIRRAAQLKSAGSFAV 270
Query: 189 ISSQSMHLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKM 246
S Q ++ L +A++T+ F V Y PR +S+FII ++K+L++++ ++VGMR++M
Sbjct: 271 PSGQQLNPATLKGVVNALSTRCAFSVCYNPRFSSSEFIIPVHKFLKSLDCSYSVGMRFRM 330
Query: 247 RFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEP-F 304
RFE ED+ ERR +G + G+ D P W SKWR L V+WD+ R +RVSPWEIEP
Sbjct: 331 RFETEDAAERRCTGLIAGISDVDPVRWLGSKWRCLLVRWDD-IEAARRNRVSPWEIEPSG 389
Query: 305 VASATPNLVQPVLAKNKRPRLSMEVPPLDLPS 336
AS + NL+ L KR R+ M L+ P+
Sbjct: 390 SASNSSNLMSAGL---KRTRIGMTSVKLEFPT 418
>gi|379323202|gb|AFD01300.1| auxin response factor 5-2 [Brassica rapa subsp. pekinensis]
Length = 836
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 154/307 (50%), Positives = 214/307 (69%), Gaps = 6/307 (1%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPT- 59
EQ+ ST + ++P + LPS+++C+V N+ L A++++DE+YAQ++L P S+ +
Sbjct: 70 EQVAVSTRRSATTQVPNYPNLPSQLMCQVHNVTLHADKDSDEIYAQMSLQPVHSERDVLP 129
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
PD + F K LTASDTSTHGGFSV R+ A + PPLD PTQELV +
Sbjct: 130 VPDLGLLRGSKHPSEYFCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYTAQPPTQELVVR 189
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH W F+HI+RGQP+RHLLTTGWS FV SKRL AGD+ +F+R E +L VGVR R
Sbjct: 190 DLHENTWTFRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANR 249
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NN 236
QQ+++PSSV+S+ SMH+GVLA A+HA A +T F++++ PR ++F+I L KY +A+ +
Sbjct: 250 QQTALPSSVLSADSMHIGVLAAAAHATANRTPFLIFFNPRACPAEFVIPLPKYRKAICGS 309
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+ +VGMR+ M FE EDS +RR+ GT+VG+ D P W SKWR+L+V+WDEP +P R
Sbjct: 310 QLSVGMRFGMMFETEDSGKRRYMGTIVGISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTR 369
Query: 296 VSPWEIE 302
VSPW+IE
Sbjct: 370 VSPWDIE 376
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 61/92 (66%), Gaps = 5/92 (5%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK---WEIVYTDDEG 587
R+ TKVQ G +VGR++D+T+ Y+ L +E MF ++G L TR K W++VY D E
Sbjct: 730 RTYTKVQKTG-SVGRSIDVTSFRDYEELKTAIECMFGLEG-LLTRPKTSGWKLVYVDYES 787
Query: 588 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
D++LVGDDPW EF V+ I I S +V++MS
Sbjct: 788 DVLLVGDDPWEEFVGCVRCIRILSPTEVQQMS 819
>gi|359483904|ref|XP_002273401.2| PREDICTED: auxin response factor 3-like [Vitis vinifera]
Length = 740
Score = 301 bits (772), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 148/298 (49%), Positives = 199/298 (66%), Gaps = 15/298 (5%)
Query: 19 FRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQ-NEPTTPDPCPADSPRPK----- 72
+ LP + CRVV++ L AE TDEVYAQ++L+PE Q + AD +
Sbjct: 87 YDLPPHVFCRVVDVKLHAEVVTDEVYAQVSLVPETKQIKQKLQEGEIEADGGEEEDIEGS 146
Query: 73 -----VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWR 127
H F K LTASDTSTHGGFSV R+ A +C PPLD Q P+QELVAKDLHG+EWR
Sbjct: 147 IKSMTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGFEWR 206
Query: 128 FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSS 187
F+HI+RGQPRRHLLTTGWS FV K+LV+GD +FLRG +GEL +G+R A+ + S P
Sbjct: 207 FRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGGDGELRLGIRRAAQIKGSSPFP 266
Query: 188 VISSQSMHLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYK 245
+ SQ ++L L +A++T+++F + Y PR +S+FII L K+ +++++ F+ GMR+K
Sbjct: 267 ALCSQQLNLNTLTAVVNAISTRSVFNICYNPRASSSEFIIPLRKFSKSIDHSFSAGMRFK 326
Query: 246 MRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 302
MR E ED+ ERR++G + G+ D P W SKWR L V+WD+ R +RVSPWEIE
Sbjct: 327 MRVETEDAAERRYTGLITGISDMDPVRWPGSKWRCLLVRWDD-IEANRHNRVSPWEIE 383
>gi|350540650|ref|NP_001234540.1| auxin response factor 6-1 [Solanum lycopersicum]
gi|300252249|gb|ADJ96372.1| auxin response factor 6-1 [Solanum lycopersicum]
Length = 524
Score = 301 bits (770), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 173/349 (49%), Positives = 228/349 (65%), Gaps = 21/349 (6%)
Query: 3 QLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTP 61
Q+ ASTN+E++ IP + LP +++C++ N+ + A+ ETDEVYAQ+TL P Q +
Sbjct: 53 QVAASTNKEVDAHIPNYPGLPPQLICQLHNLTMHADVETDEVYAQMTLQPLSPQEQK--- 109
Query: 62 DPC--PADSPRPK---VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQEL 116
D C PA+ P + F K LTASDTSTHGGFSV R+ A + PPLD +Q P QEL
Sbjct: 110 DVCLLPAELGIPSKLPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPCQEL 169
Query: 117 VAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRC 176
+AKDLHG EW+ +HIFRGQP+RHLLTTGWS FV++KRLVAGD +F+ EN +L +G+R
Sbjct: 170 IAKDLHGNEWKLRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDAVIFIWNENNQLLLGIRR 229
Query: 177 LARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV 234
R Q+ MP SV+SS SMH+G+LA A+HA AT T F ++Y PR S+F+I L KY +AV
Sbjct: 230 ANRPQTLMPFSVLSSDSMHIGLLAAAAHATATNTRFTIFYNPRASPSEFVIPLAKYAKAV 289
Query: 235 -NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITR 292
+ + +VGMR++M FE E+S RR+ GT+ G+ D P W +S WRS+KV WDE + R
Sbjct: 290 YHTRISVGMRFRMLFETEESSVRRYMGTITGISDLDPVCWPNSHWRSVKVGWDESTAGER 349
Query: 293 PDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAP 341
RVS WEIEP + P P + KRP P LPS P
Sbjct: 350 QPRVSLWEIEPL--TTFPMYPSPFSLRLKRPW------PSGLPSLPGFP 390
>gi|356569910|ref|XP_003553137.1| PREDICTED: auxin response factor 8-like [Glycine max]
Length = 841
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 158/309 (51%), Positives = 216/309 (69%), Gaps = 6/309 (1%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ A+TN+E++ IP + LP +++C++ N+ + A+ ETDEVYAQ+TL P Q + T
Sbjct: 52 EQVAATTNREIDGHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPQEQKDT 111
Query: 61 PDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
P + + F K LTASDTSTHGGFSV R+ A + PPLD + P QEL+A+
Sbjct: 112 FLSMELGIPSKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSLQPPAQELIAR 171
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ E +L +G+R R
Sbjct: 172 DLHDAEWKFRHIFRGQPKRHLLTTGWSIFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANR 231
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NN 236
Q+ MPSSV+SS SMH+G+LA A+HA AT + F V+Y PR S+F+I L+KY++AV +
Sbjct: 232 PQTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFYNPRASPSEFVIPLSKYIKAVYHT 291
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDR 295
+ +VGMR++M FE E+S RR+ GT+ G+ D S W +S WRS+KV WDE + R R
Sbjct: 292 RISVGMRFRMLFETEESSVRRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPR 351
Query: 296 VSPWEIEPF 304
VS WEIEP
Sbjct: 352 VSLWEIEPL 360
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 62/93 (66%), Gaps = 3/93 (3%)
Query: 530 NRSRTKVQM-QGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDE 586
N+S+T V++ + +VGR+LD++ Y L +EL +MF I+G+L R+ W++V+ D E
Sbjct: 712 NQSQTFVKVYKSGSVGRSLDISRFSSYHELREELAQMFGIEGKLEDPLRSGWQLVFVDRE 771
Query: 587 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
D++L+GDDPW F N V I I S +D++KM
Sbjct: 772 NDVLLLGDDPWESFVNNVWYIKILSPEDIQKMG 804
>gi|356555380|ref|XP_003546010.1| PREDICTED: auxin response factor 3-like [Glycine max]
Length = 728
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 157/332 (47%), Positives = 214/332 (64%), Gaps = 18/332 (5%)
Query: 19 FRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPD-PCPADSPRPKV---- 73
F +P + CRV+++ L AE+ +DEVY Q+ L+PE Q E + + AD
Sbjct: 82 FDIPPHVFCRVLDVKLHAEEGSDEVYCQVLLVPESEQVEHSLREGEIVADGEEEDTGATV 141
Query: 74 -----HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRF 128
H F K LTASDTSTHGGFSV R+ A +C PPLD +Q P+QELVAKDLHG EWRF
Sbjct: 142 KSTTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGLEWRF 201
Query: 129 KHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSV 188
+HI+RGQPRRHLLTTGWS FV K+LV+GD +FLRG +GEL +G+R A+ + + +V
Sbjct: 202 RHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGNDGELRLGIRRAAQLKWAGSFAV 261
Query: 189 ISSQSMHLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKM 246
S Q ++ L +A++T+ F V Y PR + FII ++K+LE+++ ++VGMR++M
Sbjct: 262 PSGQQLNPATLMDVVNALSTRCAFSVCYNPRYFSXXFIIPVHKFLESLDCSYSVGMRFRM 321
Query: 247 RFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEP-F 304
RFE ED+ +RRF+G + G+ D P W SKWR L V+WD+ R +RVSPWEIEP
Sbjct: 322 RFETEDAADRRFTGLIAGISDVDPVRWPGSKWRCLLVRWDD-IEAARHNRVSPWEIEPSG 380
Query: 305 VASATPNLVQPVLAKNKRPRLSMEVPPLDLPS 336
AS + NL+ L KR R+ M L+ P+
Sbjct: 381 SASNSSNLMAAGL---KRNRIEMTSAKLEFPN 409
>gi|302398565|gb|ADL36577.1| ARF domain class transcription factor [Malus x domestica]
Length = 712
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 151/334 (45%), Positives = 210/334 (62%), Gaps = 13/334 (3%)
Query: 19 FRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEP---------SQNEPTTPDPCPADSP 69
+ LP + CRVV++ L AE TD+V+AQ++L+PE + + + A
Sbjct: 79 YDLPPHLFCRVVDVKLHAESGTDDVFAQVSLVPESEEIEHRLLEGETDADGEEDVEAMGK 138
Query: 70 RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFK 129
H F K LTASDTSTHGGFSV R+ A +C PPLD Q P+QELVAKDLHG EWRF+
Sbjct: 139 STTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYTQQRPSQELVAKDLHGLEWRFR 198
Query: 130 HIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVI 189
HI+RGQPRRHLLTTGWS FV K+LV+GD +FLRG++GEL +G+R A+ +SS +
Sbjct: 199 HIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGIRRAAQVKSSATCPTL 258
Query: 190 SSQSMHLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMR 247
SQ ++ + +AV+T+ F VYY PR +S+FII K+L ++++ F+ GMR+KMR
Sbjct: 259 CSQQLNYSTVTDVVNAVSTKNAFNVYYNPRASSSEFIIPSRKFLRSLDHCFSAGMRFKMR 318
Query: 248 FEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA 306
FE ED+ ERR++G + G+ P W SKW+ L V+WD+ ++ RVSPWEIEP +
Sbjct: 319 FETEDAAERRYTGLITGIGALDPIRWPGSKWKCLVVRWDD-IDTSKHGRVSPWEIEPSGS 377
Query: 307 SATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASA 340
++ + + K R LS P +P+ A
Sbjct: 378 VSSSHSLMGTGLKRSRIGLSATKPEFPVPNGNGA 411
>gi|301793209|emb|CBA11995.1| putative auxin response factor 8 [Amborella trichopoda]
Length = 838
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 159/328 (48%), Positives = 219/328 (66%), Gaps = 8/328 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ ASTN+E++ IP + LP +++C++ ++ + A+ ETDEVYAQ+TL P Q +
Sbjct: 51 EQVAASTNKEIDAHIPNYPSLPPQLICQLHDVTMHADVETDEVYAQMTLQPLTQQEQKDA 110
Query: 61 PDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
P P + + F K LTASDTSTHGGFSV R+ A + PPLD Q P QEL+A+
Sbjct: 111 YVPTVLGFPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELIAR 170
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ + +L +G+R R
Sbjct: 171 DLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIWNDKNQLLLGIRRATR 230
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NN 236
Q+ MPSSV+SS SMH+G+LA A+HA AT + F ++Y PR S+F+I K+ +AV +
Sbjct: 231 PQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPFAKFAKAVYHT 290
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+ +VGMR++M FE E+S RR+ GT+ G D P W +S WRS+KV WDE + R R
Sbjct: 291 RISVGMRFRMLFETEESGVRRYMGTITGKCDLDPVRWSNSHWRSVKVGWDESTAGERQPR 350
Query: 296 VSPWEIEPFVASATPNLVQPVLAKNKRP 323
VS W+IEP + P P + KRP
Sbjct: 351 VSLWDIEPL--TTFPMYPSPFALRLKRP 376
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 542 AVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHE 599
VGR LD++ Y+ L ++ +MF ++GQL R+ W++V+ D E D +L+GD PW
Sbjct: 718 CVGRTLDISQFSSYEELRGKVADMFGLEGQLDDPLRSGWQLVFVDRENDALLLGDGPWEA 777
Query: 600 FCNMVKRIFICSSQDVKKMS 619
F N V I I S D++ M
Sbjct: 778 FVNNVWYIKILSPHDIQMMG 797
>gi|224085433|ref|XP_002307574.1| predicted protein [Populus trichocarpa]
gi|222857023|gb|EEE94570.1| predicted protein [Populus trichocarpa]
Length = 372
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 159/311 (51%), Positives = 220/311 (70%), Gaps = 9/311 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ ASTN+E++ IP + LP +++C++ N+ + A+ ETDEVYAQ+TL P SQ++
Sbjct: 36 EQVAASTNKEVDAHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPL-SQDDQKD 94
Query: 61 PDPCPAD---SPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELV 117
PA+ + + + F K LTASDTSTHGGFSV R+ A + P LD +Q+ P QEL+
Sbjct: 95 AYLLPAELGTASKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPTLDYSQTPPAQELI 154
Query: 118 AKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCL 177
A+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ E +L +G+R
Sbjct: 155 ARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA 214
Query: 178 ARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV- 234
R Q+ MPSSV+SS SMH+G+LA A+HA AT + F ++Y PR S+F+I L KY++AV
Sbjct: 215 NRPQTFMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLVKYIKAVY 274
Query: 235 NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRP 293
+ + +VGMR++M FE E+S RR+ GT+ G+ D P W +S WRS+KV WDE + R
Sbjct: 275 HTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQ 334
Query: 294 DRVSPWEIEPF 304
RVS WEIEP
Sbjct: 335 PRVSLWEIEPL 345
>gi|27450533|gb|AAO14628.1|AF467900_5 hypothetical transcription factor [Prunus persica]
Length = 954
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 154/309 (49%), Positives = 210/309 (67%), Gaps = 11/309 (3%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ ST + +IP + LPS++LC+V N+ L A++ETDE+YAQ++L P S+ +
Sbjct: 74 EQVAVSTKRTATSQIPNYPNLPSQLLCQVQNVTLHADKETDEIYAQMSLKPVNSEKDVF- 132
Query: 61 PDPCPADSPRPKVHS---FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELV 117
P P +P H F K LTASDTSTHGGFSV R+ A + PPLD P+QELV
Sbjct: 133 --PVPDFGLKPSKHPSEFFCKTLTASDTSTHGGFSVPRRAAEKLFPPLDFTMQPPSQELV 190
Query: 118 AKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCL 177
+DLH W F+HI+RGQP+RHLLTTGWS FV +KRL AGD+ +F+R E +L +GVR
Sbjct: 191 VRDLHDNSWTFRHIYRGQPKRHLLTTGWSLFVGAKRLRAGDSVLFIRDEKSQLMIGVRRA 250
Query: 178 ARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV- 234
RQQ+++PSSV+S+ SMH+GVLA A+HA A ++ F ++Y PR S+F+I L Y +A+
Sbjct: 251 NRQQTTLPSSVLSADSMHIGVLAAAAHAAANRSPFTIFYNPRACPSEFVIPLATYQKAIY 310
Query: 235 NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRP 293
+ +VGMR+ M FE E+S +RR+ GT+V D P W SKWR+L+V+WDEP +
Sbjct: 311 GTQLSVGMRFGMMFETEESGKRRYMGTIVSTSDLDPLRWPGSKWRNLQVEWDEPGCCDKQ 370
Query: 294 DRVSPWEIE 302
+RVS WEIE
Sbjct: 371 NRVSSWEIE 379
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 588
R+ TKVQ G +VGR++D+T+ Y+ L +E MF ++G L+ + W++VY D E D
Sbjct: 840 RTYTKVQKTG-SVGRSIDVTSFKNYEELCSAIECMFGLEGLLNDPRGSGWKLVYVDYEND 898
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++LVGDDPW EF V+ I I S +V++MS
Sbjct: 899 VLLVGDDPWEEFVGCVRCIRILSPTEVQQMS 929
>gi|218195802|gb|EEC78229.1| hypothetical protein OsI_17874 [Oryza sativa Indica Group]
Length = 833
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 161/327 (49%), Positives = 219/327 (66%), Gaps = 25/327 (7%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQNEPT 59
EQ+ ASTN+E+ IP + LP++++C++ ++ + A+ ETDEVYAQ+TL P P +
Sbjct: 59 EQVAASTNKEVEGHIPNYPNLPAQLICQLHDVTMHADVETDEVYAQMTLQPLNPVRRLGF 118
Query: 60 TPDPCPAD------------------SPRPKVHSFSKVLTASDTSTHGGFSVLRKHATEC 101
D C A+ S +P + F K LTASDTSTHGGFSV R+ A
Sbjct: 119 LHDVCSAEVLMQEQNDAYLPAEMGIMSKQP-TNYFCKTLTASDTSTHGGFSVPRRAAERV 177
Query: 102 LPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFV 161
PPLD Q P QEL+A+D+H EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +
Sbjct: 178 FPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVL 237
Query: 162 FLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT- 220
F+ E +L +G+R +R Q+ MPSSV+SS SMH+G+LA A+HA AT + F ++Y PR
Sbjct: 238 FIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRAS 297
Query: 221 -SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKW 277
S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+ V D P W S W
Sbjct: 298 PSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTITEVSDADPVRWPSSYW 357
Query: 278 RSLKVQWDEPASITRPDRVSPWEIEPF 304
RS+KV WDE + RP RVS WEIEP
Sbjct: 358 RSVKVGWDESTAGERPPRVSLWEIEPL 384
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 529 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 586
+ R+ KV G +VGR+LD+T Y L +EL +MF IKGQL R+ W++V+ D E
Sbjct: 732 ATRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRE 790
Query: 587 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMF 627
D++L+GDDPW F N V I I S +DV KM P +
Sbjct: 791 NDVLLLGDDPWESFVNSVWYIKILSPEDVHKMGKQGNDPRY 831
>gi|379323200|gb|AFD01299.1| auxin response factor 5-1 [Brassica rapa subsp. pekinensis]
Length = 867
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 154/308 (50%), Positives = 213/308 (69%), Gaps = 8/308 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE--P 58
EQ+ ST + ++P + LPS+++C+V N+ L A++++DE+YAQ++L P S+ + P
Sbjct: 80 EQVAVSTRRSATTQVPNYPNLPSQLMCQVHNVTLHADKDSDEIYAQMSLQPVHSERDVFP 139
Query: 59 TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
S P F K LTASDTSTHGGFSV R+ A + PPLD PTQELV
Sbjct: 140 VPEFGLLRGSKHPS-EFFCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYTAQPPTQELVV 198
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
+DLH W F+HI+RGQP+RHLLTTGWS FV SKRL AGD+ +F+R E +L VGVR
Sbjct: 199 RDLHENTWTFRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRAN 258
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-N 235
RQQ+++PSSV+S+ SMH+GVLA A+HA A +T F+++Y PR ++F+I + KY +A+
Sbjct: 259 RQQTALPSSVLSADSMHIGVLAAAAHATANRTPFLIFYNPRACPAEFVIPIAKYRKAICG 318
Query: 236 NKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPD 294
++ +V MR+ M FE EDS +RR+ GT+VG+ D P W SKWR+L+V+WDEP +P
Sbjct: 319 SQLSVSMRFGMMFETEDSGKRRYMGTIVGISDLDPLRWAGSKWRNLQVEWDEPGCNDKPT 378
Query: 295 RVSPWEIE 302
RVSPW+IE
Sbjct: 379 RVSPWDIE 386
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 60/92 (65%), Gaps = 5/92 (5%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTR---TKWEIVYTDDEG 587
R+ TKVQ G +VGR++D+T+ Y L +E MF ++G L TR + W++VY D E
Sbjct: 758 RTYTKVQKTG-SVGRSIDVTSFRDYKELKSAIECMFGLEGLL-TRPQSSGWKLVYVDYES 815
Query: 588 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
D++LVGDDPW EF VK I I S +V++MS
Sbjct: 816 DVLLVGDDPWEEFVGCVKCIRILSPTEVQQMS 847
>gi|242077548|ref|XP_002448710.1| hypothetical protein SORBIDRAFT_06g031900 [Sorghum bicolor]
gi|241939893|gb|EES13038.1| hypothetical protein SORBIDRAFT_06g031900 [Sorghum bicolor]
Length = 946
Score = 298 bits (763), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 177/370 (47%), Positives = 239/370 (64%), Gaps = 18/370 (4%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ A+T + N RIP + LPS++LC+V NI L A++ETDE+YAQ+TL P S+ +
Sbjct: 67 EQVAATTKKIPNSRIPNYPSLPSQLLCQVHNITLHADKETDEIYAQMTLQPVHSETD-VF 125
Query: 61 PDPCPADSPRPK--VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
P P + K F K LTASDTSTHGGFSV R+ A + P LD + P QEL+
Sbjct: 126 PIPSLGAYTKSKHPTEYFCKNLTASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIV 185
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
+DLH W F+HI+RGQP+RHLLTTGWS FV +KRL AGD+ +F+R E +L VGVR
Sbjct: 186 RDLHDNMWTFRHIYRGQPKRHLLTTGWSLFVGAKRLKAGDSVLFIRDEKSQLLVGVRRAT 245
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNN 236
RQQ ++ SSV+S+ SMH+GVLA A+HA ++ F +YY PRT S F+I L +Y +A
Sbjct: 246 RQQPALSSSVLSTDSMHIGVLAAAAHAASSGGSFTIYYNPRTSPSPFVIPLARYNKATYL 305
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+ +VGMR+ M FE E+S +RR +GT+VG+ D+ P W +SKWR+L+V+WDE RP+R
Sbjct: 306 QPSVGMRFAMMFETEESIKRRCTGTIVGISDYDPMRWPNSKWRNLQVEWDEHGYGERPER 365
Query: 296 VSPWEIEPFVASATP-NLVQPVLAKNKRPRL-SMEVPPLDLPSA--ASAPWSARLAQSHN 351
VS W+IE TP N+V P +KR L S VP L + S +S P A+ + N
Sbjct: 366 VSLWDIE------TPENMVFPSPLNSKRQCLPSYAVPGLQIGSVNMSSIP-RAQGSPFGN 418
Query: 352 LTQLSVTAED 361
L Q+ + D
Sbjct: 419 LQQMPGSGSD 428
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 588
R+ TKVQ G +VGR++D+T Y L + MF ++G+L + W++VY D E D
Sbjct: 843 RTYTKVQKLG-SVGRSIDVTRFRDYHELRSAIACMFGLQGKLEHPGGSDWKLVYVDYEND 901
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++LVGDDPW EF N V+ I I S +V++MS
Sbjct: 902 VLLVGDDPWEEFINCVRCIRILSPSEVQQMS 932
>gi|356564347|ref|XP_003550416.1| PREDICTED: auxin response factor 5-like [Glycine max]
Length = 934
Score = 298 bits (763), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 157/306 (51%), Positives = 210/306 (68%), Gaps = 5/306 (1%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ AST + +IP + LPS++LC+V N L A++ETDE+YAQ+TL P S+ E
Sbjct: 75 EQVAASTRRTATSQIPNYPNLPSQLLCQVQNATLHADKETDEIYAQMTLQPLNSEREVFP 134
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
+ F K LTASDTSTHGGFSV R+ A + PPLD PTQELV +D
Sbjct: 135 ISDFGLKHSKHPSEFFCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYTIQPPTQELVVRD 194
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
LH W F+HI+RGQP+RHLLTTGWS FV SKRL AGD+ +F+R E +L VGVR + RQ
Sbjct: 195 LHDNTWTFRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIRDEKSQLRVGVRRVNRQ 254
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NNK 237
Q+++PSSV+S+ SMH+GVLA A+HA A ++ F ++Y PR S+F+I L KY ++V +
Sbjct: 255 QTTLPSSVLSADSMHIGVLAAAAHAAANRSPFTIFYNPRACPSEFVIPLAKYRKSVFGTQ 314
Query: 238 FAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRV 296
+VGMR+ M FE E+S +RR+ GT+VG+ D P W SKWR+++V+WDEP + +RV
Sbjct: 315 VSVGMRFGMMFETEESGKRRYMGTIVGISDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRV 374
Query: 297 SPWEIE 302
S WEIE
Sbjct: 375 SVWEIE 380
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 151/343 (44%), Gaps = 34/343 (9%)
Query: 297 SPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLD----LPSAASAPWSARL------ 346
SPW ++P + S+ P+ +A+ ++ P LD L A+S P++ +
Sbjct: 589 SPWPMQPLIESSMPHPQMIGMAQADSAMVNGLFPQLDIDEWLAYASSQPFAGQNRPTGPF 648
Query: 347 --AQSHNLTQLSVTAEDKRIDNHVAWHH--KHSDFSSNSNFMSRTQSDGEWLTS--PRVK 400
Q HN Q V N+ W H K+ F S ++ ++ G + + P
Sbjct: 649 SDLQEHNSLQPQVVNPPLPSMNNEVWDHYVKNFKFLSQADQLTSICQPGMYGLNGVPSSN 708
Query: 401 FSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTE--TGTSCRLFG 458
+ L E+ + ++ A + T + T+L++ T + E C
Sbjct: 709 NLRDLSAESNNQSEICVNVDASNSVGTTMVDPSTSSTILDEFCTMKDGEFQNPQDC---- 764
Query: 459 IELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPK 518
++ + +SS + S+ E H +S G S +F E S
Sbjct: 765 --MVGNLSSSQDVQSQITSASLAESHAYPLRDIPDNSGGTSSSHVDFDES-------SFL 815
Query: 519 ESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTR--T 576
++ S Q R+ TKVQ G +VGR++D+TT Y+ LI +E MF + G L+ +
Sbjct: 816 QNNSWQQVPAPIRTYTKVQKAG-SVGRSIDVTTFKNYEELIRAIECMFGLDGLLNDTKGS 874
Query: 577 KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
W++VY D E D++LVGDDPW EF V+ I I S +V++MS
Sbjct: 875 GWKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPSEVQQMS 917
>gi|295844280|gb|ADG43137.1| auxin response factor 3 [Zea mays]
Length = 816
Score = 298 bits (763), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 159/310 (51%), Positives = 215/310 (69%), Gaps = 9/310 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP--EPSQNEP 58
EQ+ ASTN+E++ IP + LP +++C++ ++ + A+ ETDEVYAQ+TL P QN+
Sbjct: 57 EQVAASTNKEVDGHIPNYPNLPPQLICQLHDVTMHADVETDEVYAQMTLQPLNPQEQNDA 116
Query: 59 TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
P S +P + F K LTASDTSTHGGFSV R+ A PPLD Q P QEL+A
Sbjct: 117 YLPAEMGIMSKQP-TNYFCKTLTASDTSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIA 175
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
+D+H EW+F+HIFRG P+RHLLTTGWS FV++KRLVAGD+ +F+ E +L +G+R
Sbjct: 176 RDIHDVEWKFRHIFRG-PKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRHAT 234
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAV-N 235
R Q+ MPSSV+SS SMH+G+LA A+HA AT + F ++Y PR S +F+I L+KY++AV +
Sbjct: 235 RPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPTEFVIPLSKYIKAVFH 294
Query: 236 NKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPD 294
+ +VGMR++M FE E+S RR+ GT+ V D P W S WRS+KV WDE + RP
Sbjct: 295 TRISVGMRFRMLFETEESSVRRYMGTITEVSDADPVRWPSSYWRSVKVGWDESTAGERPP 354
Query: 295 RVSPWEIEPF 304
RVS WEIEP
Sbjct: 355 RVSLWEIEPL 364
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 61/97 (62%), Gaps = 4/97 (4%)
Query: 529 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 586
+ R+ KV G +VGR+LD+T Y L +EL +MF IKGQL R+ W++V+ D E
Sbjct: 715 TTRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRE 773
Query: 587 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS-PGS 622
D++L+GDDPW F N V I I S +DV KM PG+
Sbjct: 774 NDVLLLGDDPWESFVNSVWYIKILSPEDVHKMGKPGN 810
>gi|312281961|dbj|BAJ33846.1| unnamed protein product [Thellungiella halophila]
Length = 801
Score = 298 bits (763), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 154/310 (49%), Positives = 215/310 (69%), Gaps = 6/310 (1%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ A+TN+E+ IP + LP +++C++ N+ + A+ ETDEVYAQ+ L P + + T
Sbjct: 51 EQVAATTNKEVEGHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMVLQPLTQEEQKDT 110
Query: 61 PDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
P P + + F K LTASDTSTHGGFSV R+ A + PPLD Q P QEL+A+
Sbjct: 111 FVPIELGIPSKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYTQQPPAQELIAR 170
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRLV GD+ +F+R E +L +G+R +R
Sbjct: 171 DLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVTGDSVIFIRNERNQLLLGIRHASR 230
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAV-NN 236
Q+ +PSS++SS SMH+G+LA A+HA AT + F V+Y PR +S+F++ L KY++AV +
Sbjct: 231 PQTIVPSSMLSSDSMHIGLLAAAAHAAATNSCFTVFYHPRSSSSEFVLPLPKYIKAVFHT 290
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDR 295
+ +VGMR++M FE E+S RR+ GT+ G+ D S W +S WRS+KV WDE + R R
Sbjct: 291 RISVGMRFRMLFETEESSVRRYMGTITGIGDLDSVRWPNSHWRSVKVGWDESTAGERQAR 350
Query: 296 VSPWEIEPFV 305
S WEIEP
Sbjct: 351 ASLWEIEPLT 360
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 588
++ KV G +VGR+LD++ Y L +EL +MFDIKG L R+ W++V+ D E D
Sbjct: 694 KNFVKVYKSG-SVGRSLDISRFSSYHELREELGKMFDIKGLLEDAFRSGWQLVFVDKEDD 752
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++L+GDDPW F N V I I S +DV+KM
Sbjct: 753 VLLLGDDPWESFVNSVWYIKILSPEDVQKMG 783
>gi|168000388|ref|XP_001752898.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696061|gb|EDQ82402.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 758
Score = 298 bits (763), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 167/331 (50%), Positives = 219/331 (66%), Gaps = 10/331 (3%)
Query: 1 MEQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPT 59
+EQ+ AST +E + IP + LPS++ C + N+ L A+ ETDEVYAQ+TLLP + +
Sbjct: 34 IEQVAASTQKEADVPIPNYPSLPSRLFCLLDNVSLHADHETDEVYAQMTLLPIQNSEKEA 93
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
P + F K LTASDTSTHGGFS+ R+ A + PPLD +S P QELVA+
Sbjct: 94 LLAPDSVIPNKQPSEYFCKTLTASDTSTHGGFSIPRRAAEKVFPPLDFTKSPPAQELVAR 153
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH +W F+HI+RGQPRRHLLTTGWS FV+ KRL AGD+ +F+R + L +G+R R
Sbjct: 154 DLHDQDWHFRHIYRGQPRRHLLTTGWSVFVSIKRLQAGDSVLFIRDDKDHLLLGIRRANR 213
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NN 236
QQS MPSSV+SS SMH GVLA ASHA AT + F ++Y PR S+F+I L KY +A+ N
Sbjct: 214 QQSVMPSSVLSSDSMHFGVLAAASHAAATSSRFKIFYNPRQSPSEFVIPLAKYQKALYNT 273
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+ +GMR++M FE E+S R++ GT+ + D P W S WRSLKV WDE + R R
Sbjct: 274 QVTLGMRFRMAFETEESNVRKYMGTITCIGDLDPARWPKSDWRSLKVGWDESIAGDRQLR 333
Query: 296 VSPWEIEPFVASATPNLV--QPVLAKNKRPR 324
VS WEIEP + TP L+ PV ++KRP+
Sbjct: 334 VSLWEIEP---TPTPFLLCPPPVALRSKRPQ 361
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
Query: 533 RTKVQMQGV-AVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDM 589
RT Q+ + +VGR+LD+ Y L EL F + + + + W+IV+ D+E D
Sbjct: 670 RTCFQVHKLGSVGRSLDVRNFSNYTELRQELARRFQLDCLMEDPSSSGWQIVFVDNEDDT 729
Query: 590 MLVGDDPWHEFCNMVKRIFICSSQDVKKM 618
+L+GDDPW EF VK I I S +V +M
Sbjct: 730 LLLGDDPWEEFAKFVKTIKILSPSEVAQM 758
>gi|302806465|ref|XP_002984982.1| hypothetical protein SELMODRAFT_451395 [Selaginella moellendorffii]
gi|300147192|gb|EFJ13857.1| hypothetical protein SELMODRAFT_451395 [Selaginella moellendorffii]
Length = 835
Score = 298 bits (763), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 164/332 (49%), Positives = 221/332 (66%), Gaps = 12/332 (3%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ AST++E + +P + LP ++ C + NI L A+QE DEV+AQ+TL P
Sbjct: 46 EQVIASTHKEADFEVPSYPNLPPQLFCILHNITLHADQENDEVFAQMTLQPFSQTALLKD 105
Query: 61 PDPCPADSPRPK--VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
P P + K + SFSK LTASDTSTHGGFS+ R+ A + PPLD ++ P QELVA
Sbjct: 106 PFLLPDFGIQTKQTIVSFSKTLTASDTSTHGGFSIPRRAAEKVFPPLDFTKTPPAQELVA 165
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
+DLH EW F+HI+RGQPRRHLLTTGWS FV++KRL AGDT +FLR E G+ +G+R
Sbjct: 166 RDLHNNEWHFRHIYRGQPRRHLLTTGWSVFVSAKRLQAGDTVLFLRDEQGQHMLGIRRAN 225
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVN- 235
RQQ+++P+S++SS SM +GVLA A+HA +T + F ++Y PR S+F+I L KY +A++
Sbjct: 226 RQQTNLPTSLLSSDSMLIGVLAAAAHAASTNSRFTIFYNPRASPSEFVIPLAKYQKALHP 285
Query: 236 NKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPD 294
+ VGMR++M E EDS RR+ GT+ G+ D P W +S WRSLKV WDE + +
Sbjct: 286 PQLTVGMRFRMEMETEDSSTRRYMGTITGIGDLDPVRWPNSHWRSLKVGWDESTAGQKQR 345
Query: 295 RVSPWEIEPFVASATPNLV--QPVLAKNKRPR 324
RVS WEIEP P L+ L ++KRPR
Sbjct: 346 RVSAWEIEPLT---VPFLLCNSSFLLRSKRPR 374
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 62/103 (60%), Gaps = 3/103 (2%)
Query: 517 PKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRT 576
P+ S +Q R+ TKV G +VGR+LD+T Y L +EL MF ++ ++
Sbjct: 661 PQPSWPQQVYPPPVRTFTKVHKVG-SVGRSLDITRFKNYHELRNELTRMFGLEHD--HKS 717
Query: 577 KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
W++V+ D+E DM+L+GDDPW EF VK I I SS ++ +M+
Sbjct: 718 GWQLVFIDNENDMLLLGDDPWDEFIGCVKSIRILSSSEILQMN 760
>gi|302808955|ref|XP_002986171.1| hypothetical protein SELMODRAFT_451397 [Selaginella moellendorffii]
gi|300146030|gb|EFJ12702.1| hypothetical protein SELMODRAFT_451397 [Selaginella moellendorffii]
Length = 826
Score = 298 bits (762), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 167/343 (48%), Positives = 225/343 (65%), Gaps = 17/343 (4%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ AST++E + +P + LP ++ C + NI L A+QE DEV+AQ+TL P
Sbjct: 46 EQVIASTHKEADFEVPSYPNLPPQLFCILHNITLHADQENDEVFAQMTLQPFSQTALLKD 105
Query: 61 PDPCPADSPRPK--VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
P P + K + SFSK LTASDTSTHGGFS+ R+ A + PPLD ++ P QELVA
Sbjct: 106 PFLLPDFGIQTKQTIVSFSKTLTASDTSTHGGFSIPRRAAEKVFPPLDFTKTPPAQELVA 165
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
+DLH EW F+HI+RGQPRRHLLTTGWS FV++KRL AGDT +FLR E G+ +G+R
Sbjct: 166 RDLHNNEWHFRHIYRGQPRRHLLTTGWSVFVSAKRLQAGDTVLFLRDEQGQHMLGIRRAN 225
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVN- 235
RQQ+++P+S++SS SM +GVLA A+HA +T + F ++Y PR S+F+I L KY +A++
Sbjct: 226 RQQTNLPTSLLSSDSMLIGVLAAAAHAASTNSRFTIFYNPRASPSEFVIPLAKYQKALHP 285
Query: 236 NKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPD 294
+ VGMR++M E EDS RR+ GT+ G+ D P W +S WRSLKV WDE + +
Sbjct: 286 PQLTVGMRFRMEMETEDSSTRRYMGTITGIGDLDPVRWPNSHWRSLKVGWDESTAGQKQR 345
Query: 295 RVSPWEIEPFVASATPNLV--QPVLAKNKRPR-----LSMEVP 330
RVS WEIEP P L+ L ++KRPR L M+ P
Sbjct: 346 RVSAWEIEPLT---VPFLLCNSSFLLRSKRPRGTEEELQMKAP 385
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 62/103 (60%), Gaps = 3/103 (2%)
Query: 517 PKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRT 576
P+ S +Q R+ TKV G +VGR+LD+T Y L +EL MF ++ ++
Sbjct: 649 PQPSWPQQVYPPPVRTFTKVHKVG-SVGRSLDITRFKNYHELRNELTRMFGLEHD--HKS 705
Query: 577 KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
W++V+ D+E DM+L+GDDPW EF VK I I SS ++ +M+
Sbjct: 706 GWQLVFIDNENDMLLLGDDPWDEFIGCVKSIRILSSSEILQMN 748
>gi|255538886|ref|XP_002510508.1| Auxin response factor, putative [Ricinus communis]
gi|223551209|gb|EEF52695.1| Auxin response factor, putative [Ricinus communis]
Length = 950
Score = 298 bits (762), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 157/309 (50%), Positives = 211/309 (68%), Gaps = 11/309 (3%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ ST + +IP + L S++LC+V N+ L A+++TDE+YAQ++L P S+ +
Sbjct: 73 EQVAVSTKRTATSQIPNYPNLASQLLCQVHNVTLHADRDTDEIYAQMSLQPVNSEKDVF- 131
Query: 61 PDPCPADSPRPKVHS---FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELV 117
P P +P H F K LTASDTSTHGGFSV R+ A + PPLD PTQELV
Sbjct: 132 --PIPDFGLKPSKHPSEFFCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYTMQPPTQELV 189
Query: 118 AKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCL 177
+DLH W F+HI+RGQP+RHLLTTGWS FV SKRL AGD+ +F+R E +L VGVR
Sbjct: 190 VRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFVGSKRLKAGDSVLFIRDEKSQLLVGVRRA 249
Query: 178 ARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV- 234
RQQ+++PS V+S+ SMH+GVLA A+HA A ++ F ++Y PR S+F+I L KY +AV
Sbjct: 250 NRQQTTLPSLVLSADSMHIGVLAAAAHAAANRSPFTIFYNPRACPSEFVIPLAKYRKAVF 309
Query: 235 NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRP 293
+ +VGMR+ M FE E+S +RR+ GT+VG+ D P W SKWR+L+V+WDEP +
Sbjct: 310 GTQVSVGMRFGMMFETEESGKRRYMGTIVGISDLDPLRWPGSKWRNLQVEWDEPGCSDKQ 369
Query: 294 DRVSPWEIE 302
+RVS WEIE
Sbjct: 370 NRVSSWEIE 378
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 59/91 (64%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 588
R+ TKVQ G +VGR++D++ Y+ L +E MF ++G L+ + W++VY D E D
Sbjct: 836 RTYTKVQKAG-SVGRSIDVSGFKNYEELCSAIECMFGLEGLLNNPRESGWKLVYVDYEND 894
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++L+GDDPW EF V+ I I S +V++MS
Sbjct: 895 VLLIGDDPWEEFVGCVRCIRILSPSEVQQMS 925
>gi|297603514|ref|NP_001054169.2| Os04g0664400 [Oryza sativa Japonica Group]
gi|75248068|sp|Q8S983.1|ARFK_ORYSJ RecName: Full=Auxin response factor 11; AltName: Full=OsARF5;
AltName: Full=OsMP; AltName: Full=Protein
MONOPTEROS-like
gi|158563897|sp|Q01K26.2|ARFK_ORYSI RecName: Full=Auxin response factor 11; AltName: Full=OsARF5;
AltName: Full=OsMP; AltName: Full=Protein
MONOPTEROS-like
gi|19352037|dbj|BAB85912.1| Arabidopsis Monopteros-like protein [Oryza sativa]
gi|255675857|dbj|BAF16083.2| Os04g0664400 [Oryza sativa Japonica Group]
Length = 955
Score = 298 bits (762), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 167/348 (47%), Positives = 229/348 (65%), Gaps = 19/348 (5%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ A+T + N RIP + LPS++LC+V NI L A+++TDEVYAQ+TL P S+ +
Sbjct: 67 EQVAATTRKIPNSRIPNYPNLPSQLLCQVHNITLHADKDTDEVYAQMTLQPVNSETD-VF 125
Query: 61 PDPCPADSPRPK--VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
P P + K F K LTASDTSTHGGFSV R+ A + P LD + P QEL+
Sbjct: 126 PIPTLGAYTKSKHPTEYFCKNLTASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIV 185
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
+DLH W F+HI+RGQP+RHLLTTGWS FV +KRL AGD+ +F+R E +L +GVR
Sbjct: 186 RDLHDNMWTFRHIYRGQPKRHLLTTGWSLFVGAKRLKAGDSVLFIRDEKSQLLLGVRRAT 245
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNN 236
RQQ+ + SSV+S+ SMH+GVLA A+HA ++ + F +YY PRT S F+I + +Y +A
Sbjct: 246 RQQTMLSSSVLSTDSMHIGVLAAAAHAASSGSSFTIYYNPRTSPSPFVIPVARYNKATYM 305
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+ +VGMR+ M FE E+S +RR++GTVVG+ D+ P W +SKWR+L+V+WDE RP+R
Sbjct: 306 QPSVGMRFAMMFETEESSKRRYTGTVVGISDYDPMRWPNSKWRNLQVEWDEHGYGERPER 365
Query: 296 VSPWEIEPFVASATP--NLVQPVLAKNKR----PRLSMEVPPLDLPSA 337
VS W+IE TP LV P N + P + VP +++ SA
Sbjct: 366 VSIWDIE------TPENTLVFPSSTLNSKRQCLPGYGVSVPGMEIGSA 407
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 588
R+ TKVQ QG +VGR++D+T Y L + MF ++G+L ++W++VY D E D
Sbjct: 852 RTYTKVQKQG-SVGRSIDVTGFRNYHELRSAIACMFGLQGKLEHPGSSEWKLVYVDYEND 910
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++LVGDDPW EF N V+ I I S +V++MS
Sbjct: 911 VLLVGDDPWEEFINCVRCIRILSPSEVQQMS 941
>gi|356552071|ref|XP_003544394.1| PREDICTED: auxin response factor 5-like [Glycine max]
Length = 929
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 160/308 (51%), Positives = 214/308 (69%), Gaps = 9/308 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE--P 58
EQ+ AST + +IP + LP ++LC+V N+ L A++ETDE+YAQ+TL P S+ E P
Sbjct: 72 EQVAASTRRTATSQIPNYPNLPYQLLCQVQNVTLHADKETDEIYAQMTLQPLNSEREVFP 131
Query: 59 TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
+ D S P F K LTASDTSTHGGFSV R+ A + PPLD PTQELV
Sbjct: 132 IS-DFGHKHSKHPS-EFFCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYTIQPPTQELVV 189
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
+DLH W F+HI+RGQP+RHLLTTGWS FV SKRL AGD+ +F+R E +L VGVR +
Sbjct: 190 RDLHDNTWTFRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIRDERSQLRVGVRRVN 249
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-N 235
RQQ+++PSSV+S+ SMH+GVLA A+HA A ++ F ++Y PR S+F+I L KY ++V
Sbjct: 250 RQQTTLPSSVLSADSMHIGVLAAAAHAAANRSPFTIFYNPRACPSEFVIPLAKYRKSVFG 309
Query: 236 NKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPD 294
+ +VGMR+ M FE E+S +RR+ GT+VG+ D P W SKWR+++V+WDEP + +
Sbjct: 310 TQVSVGMRFGMMFETEESGKRRYMGTIVGISDVDPLRWPGSKWRNIQVEWDEPGCGDKQN 369
Query: 295 RVSPWEIE 302
RVS WEIE
Sbjct: 370 RVSVWEIE 377
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 84/161 (52%), Gaps = 10/161 (6%)
Query: 461 LINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKES 520
++ + +SS + S+ TE H +S G S +F E S ++
Sbjct: 760 MVGNLSSSQDVQSQITSASLTESHAFPLRDIPDNSGGTSSSHVDFDES-------SFLQN 812
Query: 521 QSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTR--TKW 578
S Q R+ TKVQ G +VGR++D+TT Y+ LI +E MF + G L+ + W
Sbjct: 813 NSWQQVPAPIRTYTKVQKAG-SVGRSIDVTTFKNYEELIRAIECMFGLDGLLNDTKCSGW 871
Query: 579 EIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++VY D E D++LVGDDPW EF V+ I I S +V++MS
Sbjct: 872 KLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPSEVQQMS 912
>gi|379323212|gb|AFD01305.1| auxin response factor 8-1 [Brassica rapa subsp. pekinensis]
Length = 780
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 155/310 (50%), Positives = 214/310 (69%), Gaps = 6/310 (1%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ A+TN+E+ IP + LP +++C++ N+ + A+ ETDEVYAQ+ L P + + T
Sbjct: 51 EQVAATTNKEVEGHIPNYPTLPPQLICQLHNVTMHADLETDEVYAQMVLQPLTQEEQKDT 110
Query: 61 PDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
P P + + F K LTASDTSTHGGFSV R+ A + PPLD Q P QEL+AK
Sbjct: 111 FVPIELGVPSKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYTQQPPAQELIAK 170
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRLV GD+ +F+R E +L +G+R R
Sbjct: 171 DLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVTGDSVIFIRNERNQLLLGIRHATR 230
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAV-NN 236
Q+ +PSS++SS SMH+G+LA A+HA AT + F V+Y PR +S+F++ L KY++AV +
Sbjct: 231 PQTIVPSSMLSSDSMHIGLLAAAAHAAATNSCFTVFYHPRSSSSEFVLPLPKYIKAVFHT 290
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDR 295
+ +VGMR++M FE E+S RR+ GT+ G+ D S W +S WRS+KV WDE + R R
Sbjct: 291 RISVGMRFRMLFETEESSVRRYMGTITGIGDLDSVLWPNSHWRSVKVGWDESTAGERQAR 350
Query: 296 VSPWEIEPFV 305
S WEIEP
Sbjct: 351 ASLWEIEPLT 360
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 57/97 (58%), Gaps = 6/97 (6%)
Query: 534 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGDMML 591
KV G +VGR+LD++ Y+ L +EL MFDIKG L R+ W++V+ D E D++L
Sbjct: 679 VKVYKSG-SVGRSLDISRFSSYNELREELGRMFDIKGLLEDAFRSGWQLVFVDKEDDILL 737
Query: 592 VGDDPWHEFCNMVKRIFICSSQDVKKM---SPGSKLP 625
+GDDPW F N V I I S DV KM GS P
Sbjct: 738 LGDDPWESFVNSVWYIKILSPDDVHKMGEHGEGSSFP 774
>gi|357162522|ref|XP_003579438.1| PREDICTED: auxin response factor 11-like [Brachypodium distachyon]
Length = 955
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 158/309 (51%), Positives = 212/309 (68%), Gaps = 11/309 (3%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ A+T + N RIP + LPS++LC+V NI + A++ETDEVYAQ+TL P N T
Sbjct: 68 EQVAATTRKVPNSRIPNYPNLPSQLLCQVHNITMHADKETDEVYAQMTLQPV---NSETD 124
Query: 61 PDPCPADSPRPKV----HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQEL 116
P PA K F K LTASDTSTHGGFSV R+ A + P LD + P QEL
Sbjct: 125 VFPIPALGSYAKSKHPPEYFCKNLTASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQEL 184
Query: 117 VAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRC 176
+ +DLH W F+HI+RGQP+RHLLTTGWS FV +KRL AGD+ +F+R E +L +GVR
Sbjct: 185 IVRDLHDNMWTFRHIYRGQPKRHLLTTGWSLFVGAKRLKAGDSVLFIRDEKSQLLLGVRR 244
Query: 177 LARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV 234
RQQ+ + SSV+S+ SMH+GVLA A+HA ++ + F +YY PRT S F++ L +Y +A
Sbjct: 245 ATRQQTQLSSSVLSTDSMHIGVLAAAAHAASSGSSFTIYYNPRTSPSPFVVPLARYNKAN 304
Query: 235 NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRP 293
+ +VGMR+ M FE E+S +RR++GT+VGV D+ P W +SKWR+L+V+WDE RP
Sbjct: 305 YVQQSVGMRFAMMFETEESSKRRYTGTIVGVSDYDPIRWPNSKWRNLQVEWDEHGYGERP 364
Query: 294 DRVSPWEIE 302
+RVS W+IE
Sbjct: 365 ERVSIWDIE 373
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 59/91 (64%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 588
R+ TKVQ G +VGR++D+T Y L + MF ++G+L ++W++VY D E D
Sbjct: 851 RTYTKVQKLG-SVGRSIDVTRYRDYRELRSAIASMFGLQGKLEHPGSSEWKLVYVDYEND 909
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++LVGDDPW EF N V+ I I S +V++MS
Sbjct: 910 VLLVGDDPWEEFINCVRCIRILSPSEVQQMS 940
>gi|449460205|ref|XP_004147836.1| PREDICTED: auxin response factor 5-like [Cucumis sativus]
gi|449476870|ref|XP_004154860.1| PREDICTED: auxin response factor 5-like [Cucumis sativus]
Length = 949
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 152/309 (49%), Positives = 210/309 (67%), Gaps = 11/309 (3%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ ST + +IP + LPS+++C+V N+ L A++++DE+YAQ++L P S+ +
Sbjct: 74 EQVAVSTKRTATSQIPNYPNLPSQLMCQVQNVTLHADKDSDEIYAQMSLQPVNSEKDVFL 133
Query: 61 PDPCPADSPRPKVHS---FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELV 117
P RP H F K LTASDTSTHGGFSV R+ A + PPLD PTQEL+
Sbjct: 134 ---VPDFGLRPSKHPNEFFCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYTMQPPTQELI 190
Query: 118 AKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCL 177
+DLH W F+HI+RGQP+RHLLTTGWS FV +KRL AGD+ +F+R E +L +GVR
Sbjct: 191 VRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFVGAKRLRAGDSVLFIRDEKSQLLIGVRRA 250
Query: 178 ARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV- 234
RQQ+++PSSV+S+ SMH+GVLA A+HA A ++ F ++Y PR S+F+I L KY + V
Sbjct: 251 NRQQTTLPSSVLSADSMHIGVLAAAAHAAANRSPFTIFYNPRACPSEFVIPLAKYRKCVY 310
Query: 235 NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRP 293
+ + GMR+ M FE E+S +RR+ GT+VG+ D P W SKWR+L+V+WDEP +
Sbjct: 311 GTQLSAGMRFGMMFETEESGKRRYMGTIVGISDLDPLRWPGSKWRNLQVEWDEPGCCDKQ 370
Query: 294 DRVSPWEIE 302
+RVS WEIE
Sbjct: 371 NRVSSWEIE 379
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 588
R+ TKVQ G +VGR++D+T+ YD L +E MF ++G L+ + W++VY D E D
Sbjct: 835 RTYTKVQKAG-SVGRSIDVTSFKNYDELCSAIECMFGLEGLLNDPRGSGWKLVYVDYEND 893
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++L+GDDPW EF + V+ I I S +V++MS
Sbjct: 894 VLLIGDDPWEEFVSCVRCIRILSPSEVQQMS 924
>gi|168034767|ref|XP_001769883.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678789|gb|EDQ65243.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 411
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 159/331 (48%), Positives = 213/331 (64%), Gaps = 11/331 (3%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ ST +E + IP + L ++C + N+ L A+ ETD+VYAQ+ L+P + T
Sbjct: 66 EQVAVSTQKEADIHIPNYPNLRPHLICTLENVTLHADLETDDVYAQMVLIPTQDPEKETM 125
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
P + F K LTASDTSTHGGFS+ R+ A + P LD Q P QELVA+D
Sbjct: 126 LLPDVVVQNKQPTEYFCKTLTASDTSTHGGFSIPRRAAEKVFPTLDYTQQPPAQELVARD 185
Query: 121 LHGYEWRFKHIFR-GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
LH +W F+HI+R GQPRRHLLTTGWS F+++KRL AGD +F+R + G+L +G+R R
Sbjct: 186 LHDQDWHFRHIYRAGQPRRHLLTTGWSIFISAKRLQAGDAVLFIRDDKGQLLLGIRRANR 245
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NN 236
Q+ MPSSV+SS SMH+G+LA ASHA T + F ++Y PR S+F+I KY +AV +
Sbjct: 246 LQTIMPSSVLSSDSMHIGILAAASHAAQTSSRFTIFYNPRQSPSEFVIPSAKYQKAVYST 305
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+ VGMR++M FE E+S RR+ GTV G+ D P W +S WRSLKV WDE + R R
Sbjct: 306 QITVGMRFRMMFETEESTVRRYMGTVTGIGDLDPVRWPNSHWRSLKVGWDESTAGERQRR 365
Query: 296 VSPWEIEPFVASATPNLV--QPVLAKNKRPR 324
VS WEIEP TP L+ P++ ++KR R
Sbjct: 366 VSLWEIEPL---TTPFLICPPPIVLRSKRAR 393
>gi|357472327|ref|XP_003606448.1| Auxin response factor [Medicago truncatula]
gi|355507503|gb|AES88645.1| Auxin response factor [Medicago truncatula]
Length = 471
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 153/349 (43%), Positives = 209/349 (59%), Gaps = 56/349 (16%)
Query: 16 IPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEP---------------------S 54
IP + L +I CRVVN+ L+A +E DEVY Q+TLLP+
Sbjct: 95 IPNYDLQPQIFCRVVNVQLLANKENDEVYTQVTLLPQAELAGMHMEGKEVEELEGDEEGD 154
Query: 55 QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQ 114
PT P H F K LT SDTSTHGGFSV R+ A +C PPLD P+Q
Sbjct: 155 GGSPTKSTP----------HMFCKTLTVSDTSTHGGFSVPRRAAEDCFPPLDYKLQRPSQ 204
Query: 115 ELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLR---------- 164
ELVAKDLHG EW+F+HI+RGQPRRHLLTTGWS FV K LV+GD +FLR
Sbjct: 205 ELVAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVNQKNLVSGDAVLFLRGQDCVHLSSP 264
Query: 165 ----GENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT 220
G+NGEL +G+R R ++ +P S++ +Q+ + L++ ++A++T++MF V+Y PR
Sbjct: 265 DLTWGQNGELRLGIRRAVRPRNGLPESIVGNQNCYPNFLSSVANAISTKSMFHVFYSPRA 324
Query: 221 S--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRF-SGTVVGVEDFSPH-WKDSK 276
S +F++ KY++++ N +G R+KMR E ++SPERR SG ++G+ D P+ W SK
Sbjct: 325 SHAEFVVPYQKYVKSIKNPMTIGTRFKMRIEMDESPERRCSSGMLIGINDLDPYRWPKSK 384
Query: 277 WRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRL 325
WR L V+WD+ DRVSPWEI+P ++P QP L+ PRL
Sbjct: 385 WRCLMVRWDDDTETNHQDRVSPWEIDP----SSP---QPPLSIQSSPRL 426
>gi|449522288|ref|XP_004168159.1| PREDICTED: uncharacterized LOC101205542 [Cucumis sativus]
Length = 1107
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 163/329 (49%), Positives = 223/329 (67%), Gaps = 8/329 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPS-QNEPT 59
EQ+ AS ++++ ++P + L SK+LC + N+ L A+ ETDEVYAQ+TLLP PS +
Sbjct: 58 EQVAASLRKDVDGQVPNYPSLASKLLCLLHNVTLHADPETDEVYAQMTLLPVPSFDKDAL 117
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
S +P+ F K LTASDTSTHGGFSV R+ A + PPLD + P QELVAK
Sbjct: 118 LRSDLALKSNKPQPEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVAK 177
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH W F+HI+RGQP+RHLLTTGWS FV+ KRL+AGD+ +F+R E +L +G+R R
Sbjct: 178 DLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLLAGDSVLFIRDEKQQLLLGIRRANR 237
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVN-N 236
Q +++ SSV+SS SMH+G+LA A+HA A + F V+Y PR S+F+I L KY +AV+ N
Sbjct: 238 QPTNLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVIPLAKYYKAVSAN 297
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+ ++GMR++M FE E+S RR+ GT+ G+ D P WK S+WR+L+V WDE R +R
Sbjct: 298 QISLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKGSQWRNLQVGWDESTGGERRNR 357
Query: 296 VSPWEIEPFVASATPNLVQPVLAKNKRPR 324
VS WEIEP +A + P ++KRPR
Sbjct: 358 VSVWEIEPVIAPFF--ICPPPFLRSKRPR 384
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 588
R+ TKV +G AVGR++D+ GYD L +L F I+GQL R K W++VY D E D
Sbjct: 995 RTYTKVYKRG-AVGRSIDIARYSGYDELKQDLARRFGIEGQLEDRQKIGWKLVYVDHEND 1053
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++LVGDDPW +F N V+ I I S Q+V++MS
Sbjct: 1054 VLLVGDDPWDDFVNCVRSIKILSPQEVQQMS 1084
>gi|301793223|emb|CBA12002.1| putative auxin response factor 6/8 [Ephedra distachya]
Length = 870
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 157/312 (50%), Positives = 217/312 (69%), Gaps = 12/312 (3%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ ASTN+EL+ +IP + LP +++C + N+ + A+ ETDEVYAQ+TL P Q + +
Sbjct: 49 EQVAASTNRELDVQIPNYTSLPPQLICHLHNVTMNADVETDEVYAQMTLQPLSLQEQKES 108
Query: 61 ---PD-PCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQEL 116
PD P+ P + F LTASDTSTHGGFS+ R+ A + P LD Q P QEL
Sbjct: 109 YFVPDLGSPSKQPS---NYFCXTLTASDTSTHGGFSIPRRAAEKVFPLLDFTQQPPAQEL 165
Query: 117 VAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRC 176
A+DLH EW+F+HI+RGQP+RHLLTTGWS FV++KRLVAGD+ +F+R ++G+L +G+R
Sbjct: 166 CARDLHNTEWKFRHIYRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIRNDSGQLLLGIRR 225
Query: 177 LARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV 234
+ + MPSSV+SS SMH+GVLA A+HA AT + F ++Y PR S+F+I +KY +AV
Sbjct: 226 ANKSPTVMPSSVLSSDSMHIGVLAAAAHAAATNSPFNIFYNPRASPSEFVIPFSKYEKAV 285
Query: 235 -NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITR 292
+ + +VG+R++M FE E+S RR+ GT+ G+ D P W +S+WRSLKV WDE + R
Sbjct: 286 YHTQVSVGLRFRMLFETEESGVRRYMGTITGIGDMDPVRWPNSRWRSLKVGWDESTAGER 345
Query: 293 PDRVSPWEIEPF 304
RVS WEIEP
Sbjct: 346 NPRVSLWEIEPL 357
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 68/106 (64%), Gaps = 3/106 (2%)
Query: 515 VSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH- 573
+SP+ + Q L + R+ TKV G ++GR++D+T GY L EL MF+++GQL
Sbjct: 723 ISPQAANLSQIHLPT-RTFTKVYKLG-SIGRSIDVTRFSGYPELRCELARMFNLEGQLED 780
Query: 574 TRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
R+ W++V+ D E D++L+GDDPW EF V+ I I S +V++M+
Sbjct: 781 CRSGWQLVFVDKENDVLLLGDDPWEEFVINVRYIKILSPPEVQQMT 826
>gi|293334075|ref|NP_001169359.1| auxin response factor 4 [Zea mays]
gi|224028907|gb|ACN33529.1| unknown [Zea mays]
gi|407232690|gb|AFT82687.1| ARF4 transcription factor, partial [Zea mays subsp. mays]
Length = 936
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 159/307 (51%), Positives = 211/307 (68%), Gaps = 7/307 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ A+T + N RIP + LPS++LC+V NI L A++ETDE+YAQ+TL P S+ +
Sbjct: 68 EQVAATTKKIPNSRIPNYPSLPSQLLCQVHNITLHADKETDEIYAQMTLQPVHSETD-VF 126
Query: 61 PDPCPADSPRPKVHS--FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
P P + K S F K LTASDTSTHGGFSV R+ A + P LD + P QEL+
Sbjct: 127 PIPTLGAYTKSKHSSEYFCKNLTASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIV 186
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
+DLH W F+HI+RGQP+RHLLTTGWS FV +KRL AGD+ +F+R E +L VGVR
Sbjct: 187 RDLHDNMWTFRHIYRGQPKRHLLTTGWSLFVGAKRLKAGDSVLFIRDEKSQLLVGVRRAT 246
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNN 236
RQQ ++ SSV+S+ SMH+GVLA A+HA ++ F VYY PRT S F+I L +Y A
Sbjct: 247 RQQPALSSSVLSTDSMHIGVLAAAAHAASSGGSFTVYYNPRTSPSPFVIPLARYNTATYL 306
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+ +VGMR+ M FE E+S +RR +GT+VG+ D+ P W +SKWR+L+V+WDE RP+R
Sbjct: 307 QPSVGMRFAMMFETEESSKRRCTGTIVGISDYEPMRWPNSKWRNLQVEWDEHGYGERPER 366
Query: 296 VSPWEIE 302
VS W+IE
Sbjct: 367 VSLWDIE 373
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 588
R+ TKVQ G +VGR++D+T Y L + MF ++G+L + W++VY D E D
Sbjct: 833 RTYTKVQKLG-SVGRSIDVTRFRDYHELRSAIACMFGLQGKLEHPGSSDWKLVYVDYEND 891
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++LVGDDPW EF N V+ I I + +V++MS
Sbjct: 892 VLLVGDDPWEEFINCVRCIRILAPSEVQQMS 922
>gi|357446777|ref|XP_003593664.1| Auxin response factor [Medicago truncatula]
gi|124360755|gb|ABN08732.1| Transcriptional factor B3; Auxin response factor [Medicago
truncatula]
gi|355482712|gb|AES63915.1| Auxin response factor [Medicago truncatula]
Length = 682
Score = 295 bits (755), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 154/329 (46%), Positives = 210/329 (63%), Gaps = 17/329 (5%)
Query: 21 LPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPC-PADSPRPKV------ 73
+P + CRV+++ L AE+ +DEVY Q+ L+PE Q E + AD+
Sbjct: 93 IPPHVFCRVLDVKLHAEEGSDEVYCQVLLVPENQQLEQNVREGVIDADAEEEDTEAIVKS 152
Query: 74 ---HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKH 130
H F K LTASDTSTHGGFSV R+ A +C PPLD Q P+QELVAKDLHG EWRF+H
Sbjct: 153 TTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYGQQRPSQELVAKDLHGSEWRFRH 212
Query: 131 IFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVIS 190
I+RGQPRRHLLTTGWS FV K+LV+GD +FLRGE+GEL +G+R + +SS +S
Sbjct: 213 IYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGELRLGIRRAVQLKSSGSFGGLS 272
Query: 191 SQSMHLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRF 248
+ G L +A++ ++ F V Y PR +S+FII +NK+L++++ ++ GMR++MRF
Sbjct: 273 GMQLDPGSLMDVVNALSKRSAFSVCYNPRVSSSEFIIPVNKFLKSLDCSYSAGMRFRMRF 332
Query: 249 EGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEP-FVA 306
E ED+ ERRF+G + G+ D P W SKW+ L V+WD+ + +RVSPWEIEP A
Sbjct: 333 ETEDAAERRFTGLIAGISDADPVRWPGSKWKCLLVRWDDIEASRHNNRVSPWEIEPSGSA 392
Query: 307 SATPNLVQPVLAKNKRPRLSMEVPPLDLP 335
S + NL+ L KR R+ L+ P
Sbjct: 393 SNSSNLMAASL---KRTRIGFTSAKLEFP 418
>gi|301793221|emb|CBA12001.1| putative auxin response factor 8 [Illicium parviflorum]
Length = 794
Score = 295 bits (755), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 155/309 (50%), Positives = 212/309 (68%), Gaps = 6/309 (1%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ STN+E+N IP + L +++C++ N+ + A+ ETDEVYAQ+TL P Q + +
Sbjct: 53 EQVAVSTNKEVNGHIPNYPSLSPQLICQLHNVTMHADMETDEVYAQMTLQPLNQQEQKDS 112
Query: 61 PDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
P P + + F K LTASDTSTHGGFSV R+ A + PPLD Q P QELVA+
Sbjct: 113 YLPAELGVPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELVAR 172
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ E +L +G+R +R
Sbjct: 173 DLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASR 232
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NN 236
Q+ MPSSV+SS SMH+G+LA A+HA AT + F ++Y PR S+F+I L+KY +AV +
Sbjct: 233 PQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLSKYAKAVFHT 292
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+ + MR++M FE ++S RR+ G + G+ D P W +S WRS+KV WDE + R R
Sbjct: 293 RISDDMRFRMLFETDESSVRRYMGRITGISDLDPVRWSNSHWRSVKVIWDESTAGERQPR 352
Query: 296 VSPWEIEPF 304
VS WEIEP
Sbjct: 353 VSLWEIEPL 361
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 58/103 (56%), Gaps = 3/103 (2%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 588
R+ KV G +VGR+LD+ Y L +EL +MF + G+L R+ W++V+ D E D
Sbjct: 668 RTFVKVYKSG-SVGRSLDIAQFSSYHELREELGQMFGLGGKLRDPLRSGWQLVFVDREND 726
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEG 631
++L+GDDPW F N V I I S DV+ M P+ + G
Sbjct: 727 VLLLGDDPWESFVNNVWYIKILSPDDVQNMGKHDVEPLNPMGG 769
>gi|414584938|tpg|DAA35509.1| TPA: auxin response factor 4 [Zea mays]
Length = 936
Score = 295 bits (754), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 159/307 (51%), Positives = 211/307 (68%), Gaps = 7/307 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ A+T + N RIP + LPS++LC+V NI L A++ETDE+YAQ+TL P S+ +
Sbjct: 68 EQVAATTKKIPNSRIPNYPSLPSQLLCQVHNITLHADKETDEIYAQMTLQPVHSETD-VF 126
Query: 61 PDPCPADSPRPKVHS--FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
P P + K S F K LTASDTSTHGGFSV R+ A + P LD + P QEL+
Sbjct: 127 PIPTLGAYTKSKHPSEYFCKNLTASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIV 186
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
+DLH W F+HI+RGQP+RHLLTTGWS FV +KRL AGD+ +F+R E +L VGVR
Sbjct: 187 RDLHDNMWTFRHIYRGQPKRHLLTTGWSLFVGAKRLKAGDSVLFIRDEKSQLLVGVRRAT 246
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNN 236
RQQ ++ SSV+S+ SMH+GVLA A+HA ++ F VYY PRT S F+I L +Y A
Sbjct: 247 RQQPALSSSVLSTDSMHIGVLAAAAHAASSGGSFTVYYNPRTSPSPFVIPLARYNMATYL 306
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+ +VGMR+ M FE E+S +RR +GT+VG+ D+ P W +SKWR+L+V+WDE RP+R
Sbjct: 307 QPSVGMRFAMMFETEESSKRRCTGTIVGISDYEPMRWPNSKWRNLQVEWDEHGYGERPER 366
Query: 296 VSPWEIE 302
VS W+IE
Sbjct: 367 VSLWDIE 373
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 588
R+ TKVQ G +VGR++D+T Y L + MF ++G+L + W++VY D E D
Sbjct: 833 RTYTKVQKLG-SVGRSIDVTRFRDYHELRSAIACMFGLQGKLEHPGSSDWKLVYVDYEND 891
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++LVGDDPW EF N V+ I I + +V++MS
Sbjct: 892 VLLVGDDPWEEFINCVRCIRILAPSEVQQMS 922
>gi|295844282|gb|ADG43138.1| auxin response factor 4 [Zea mays]
Length = 935
Score = 295 bits (754), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 159/307 (51%), Positives = 211/307 (68%), Gaps = 7/307 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ A+T + N RIP + LPS++LC+V NI L A++ETDE+YAQ+TL P S+ +
Sbjct: 67 EQVAATTKKIPNSRIPNYPSLPSQLLCQVHNITLHADKETDEIYAQMTLQPVHSETD-VF 125
Query: 61 PDPCPADSPRPKVHS--FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
P P + K S F K LTASDTSTHGGFSV R+ A + P LD + P QEL+
Sbjct: 126 PIPTLGAYTKSKHPSEYFCKNLTASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIV 185
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
+DLH W F+HI+RGQP+RHLLTTGWS FV +KRL AGD+ +F+R E +L VGVR
Sbjct: 186 RDLHDNMWTFRHIYRGQPKRHLLTTGWSLFVGAKRLKAGDSVLFIRDEKSQLLVGVRRAT 245
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNN 236
RQQ ++ SSV+S+ SMH+GVLA A+HA ++ F VYY PRT S F+I L +Y A
Sbjct: 246 RQQPALSSSVLSTDSMHIGVLAAAAHAASSGGSFTVYYNPRTSPSPFVIPLARYNMATYL 305
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+ +VGMR+ M FE E+S +RR +GT+VG+ D+ P W +SKWR+L+V+WDE RP+R
Sbjct: 306 QPSVGMRFAMMFETEESSKRRCTGTIVGISDYEPMRWPNSKWRNLQVEWDEHGYGERPER 365
Query: 296 VSPWEIE 302
VS W+IE
Sbjct: 366 VSLWDIE 372
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 588
R+ TKVQ G +VGR++D+T Y L + MF ++G+L + W++VY D E D
Sbjct: 832 RTYTKVQKLG-SVGRSIDVTRFRDYHELRSAIACMFGLQGKLEHPGSSDWKLVYVDYEND 890
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++LVGDDPW EF N V+ I I + +V++MS
Sbjct: 891 VLLVGDDPWEEFINCVRCIRILAPSEVQQMS 921
>gi|224077042|ref|XP_002305105.1| predicted protein [Populus trichocarpa]
gi|222848069|gb|EEE85616.1| predicted protein [Populus trichocarpa]
Length = 709
Score = 295 bits (754), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 143/299 (47%), Positives = 197/299 (65%), Gaps = 14/299 (4%)
Query: 18 LFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPC----------PAD 67
++ LP + CRVV++ L AE +D+VYAQ++L+PE + E + A
Sbjct: 86 IYDLPPHVFCRVVDVKLHAEAASDDVYAQVSLVPESEEIEQKLREGVFEGDGEEEDVEAT 145
Query: 68 SPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWR 127
H F K LTASDTSTHGGFSV R+ A +C PPLD Q P+QELVAKDLHG EW+
Sbjct: 146 VKTTTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYTQQRPSQELVAKDLHGSEWK 205
Query: 128 FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSS 187
F+HI+RGQPRRHLLTTGWS FV K+LV+GD +FLRGE+GEL +GVR A+ +
Sbjct: 206 FRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGELRLGVRRAAQVKCGPTFP 265
Query: 188 VISSQSMHLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYK 245
+ +Q ++ LA ++A++ ++ F +YY PR +S+FII NK+L++++ F+ GMR K
Sbjct: 266 ALWNQQLNQSSLADVANAISMRSAFRIYYNPRASSSEFIIPFNKFLKSLDQSFSAGMRVK 325
Query: 246 MRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEP 303
MRFE ED+ ERR++G + G+ + P W SKW+ L V+WD+ R RVSPWE+EP
Sbjct: 326 MRFETEDAAERRYTGLITGISELDPTRWPGSKWKCLLVRWDD-TEANRHSRVSPWEVEP 383
>gi|115439091|ref|NP_001043825.1| Os01g0670800 [Oryza sativa Japonica Group]
gi|122241144|sp|Q0JKI9.1|ARFB_ORYSJ RecName: Full=Auxin response factor 2; AltName: Full=ETTIN-like
protein 2; AltName: Full=OsETTIN2
gi|19352035|dbj|BAB85911.1| Arabidopsis ETTIN-like protein 2 [Oryza sativa]
gi|113533356|dbj|BAF05739.1| Os01g0670800 [Oryza sativa Japonica Group]
Length = 718
Score = 294 bits (753), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 154/351 (43%), Positives = 215/351 (61%), Gaps = 14/351 (3%)
Query: 17 PLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLP-----EPSQNEPTTPDPCPADS--- 68
P +P + CRVV++ L A+ TDEVYAQ++L+ E E C +
Sbjct: 77 PGAAVPPHVFCRVVDVSLHADAATDEVYAQVSLVADNEEVERRMREGEDGAACDGEGEDA 136
Query: 69 ---PRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYE 125
P H F K LTASDTSTHGGFSV R+ A +C PPLD + P QELVAKDLHG E
Sbjct: 137 VKRPARIPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSLQRPFQELVAKDLHGTE 196
Query: 126 WRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMP 185
WRF+HI+RGQPRRHLLTTGWS F+ K+LV+GD +FLRGE+GEL +GVR A+ +++ P
Sbjct: 197 WRFRHIYRGQPRRHLLTTGWSGFINKKKLVSGDAVLFLRGEDGELRLGVRRAAQLKNASP 256
Query: 186 SSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMR 243
+ +Q + L+ +HAVA +++F +YY PR SQ FII K++ + + F+VGMR
Sbjct: 257 FPALHNQISNTSSLSEVAHAVAVKSIFHIYYNPRLSQSEFIIPYWKFMRSFSQPFSVGMR 316
Query: 244 YKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEP 303
+K+R+E ED+ ERR +G ++G + P W SKW+ L V+WD+ RP+ VSPWEIE
Sbjct: 317 FKLRYESEDASERRRTGIIIGSREADPMWHGSKWKCLVVKWDDDVECRRPNGVSPWEIEL 376
Query: 304 FVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQ 354
+ + +L P +K + P + LP+ + + A A+ H + Q
Sbjct: 377 SGSVSGSHLSTP-HSKRLKSCFPQVNPDIVLPNGSVSSDFAESARFHKVLQ 426
>gi|357135881|ref|XP_003569536.1| PREDICTED: auxin response factor 2-like [Brachypodium distachyon]
Length = 697
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 156/350 (44%), Positives = 218/350 (62%), Gaps = 16/350 (4%)
Query: 20 RLPSKILCRVVNIHLMAEQETDEVYAQITL----------LPEPSQNEPTTPDPCPADSP 69
++P + CRVV+++L A+ TDEVYAQ+TL + + E D AD+
Sbjct: 69 KVPPHVFCRVVDVNLQADAATDEVYAQVTLAVDNEESKRRVRDGENEEARDGDGEDADAM 128
Query: 70 R--PKV-HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEW 126
+ P++ H F K LTASDTSTHGGFSV R+ A +C PPLD + P+QELVAKDLHG EW
Sbjct: 129 KRLPRIPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSLPRPSQELVAKDLHGTEW 188
Query: 127 RFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPS 186
RF+HI+RGQPRRHLLTTGWS FV K+LV+GD +FLRGE+GEL +GVR +A+ ++ P
Sbjct: 189 RFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGELRLGVRRVAQLKNVSPF 248
Query: 187 SVISSQSMHLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRY 244
+Q L +HA+A ++ F VYY PR S+FII K++ +V F+ GMR+
Sbjct: 249 PAPHNQDPGHSSLGNVAHALAVKSTFHVYYNPRLCQSEFIIPYWKFMRSVGQPFSAGMRF 308
Query: 245 KMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 304
KMR+E ED+ ERR +G ++G + P SKW+ L V+WD+ RP+RVSPW+IE
Sbjct: 309 KMRYENEDASERRSTGIIIGSRESDPKSYGSKWKCLVVRWDDDIEGRRPNRVSPWDIE-L 367
Query: 305 VASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQ 354
+ + + + +K +P L P + LPS + + A A+ H + Q
Sbjct: 368 TGAVSGSHLSIHHSKRMKPCLPQVNPDMLLPSGSVSSDFAESARFHKVLQ 417
>gi|224116336|ref|XP_002331957.1| predicted protein [Populus trichocarpa]
gi|222874734|gb|EEF11865.1| predicted protein [Populus trichocarpa]
Length = 714
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 155/357 (43%), Positives = 218/357 (61%), Gaps = 22/357 (6%)
Query: 16 IPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPC----------P 65
+ ++ LPS + CRVV++ L AE +DEVYAQ++L+PE + E +
Sbjct: 84 LAVYDLPSHVFCRVVDVKLHAEAASDEVYAQVSLVPESEEIEQKLREGIFEGDGEEEDGE 143
Query: 66 ADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYE 125
A H F K LTASDTSTHGGFSV R+ A +C PPLD Q P+QELVAKDLHG E
Sbjct: 144 ATVKMTTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYTQQRPSQELVAKDLHGSE 203
Query: 126 WRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMP 185
W+F+HI+RGQPRRHLLTTGWS FV K+LV+GD +FLRGE+GEL +GVR A+ +
Sbjct: 204 WKFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGELRLGVRRAAQVKCGPT 263
Query: 186 SSVISSQSMHLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMR 243
+ ++ ++A++T++ F +YY PR +S+FII NK+L++++ F+ GMR
Sbjct: 264 FPAQWNHQLNQISPGDVANAISTRSFFHIYYNPRASSSEFIIPFNKFLKSLDQSFSSGMR 323
Query: 244 YKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 302
+KMRFE ED+ ERR++G + GV + P W SKW+ L V+WD+ R RVSPWE+E
Sbjct: 324 FKMRFETEDAAERRYTGIITGVSELDPARWPGSKWKCLLVRWDD-REANRLSRVSPWEVE 382
Query: 303 PFVASATP---NLVQPVLAKNKR--PRLSMEVPPLDLPSAASAPWSARLAQSHNLTQ 354
P + + N + P L +++ P E P +P AP ++S + Q
Sbjct: 383 PSGSGSISSSNNFMAPGLKRSRSGLPSSKAEFP---IPDGIGAPGFRESSRSQEVLQ 436
>gi|73697836|gb|AAZ81522.1| auxin response factor 2 [Gossypium arboreum]
Length = 1099
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 171/352 (48%), Positives = 232/352 (65%), Gaps = 14/352 (3%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPS-QNEPT 59
EQ+ AS ++++ +IP + LPSK+LC + N+ L A+ ETDEVYAQ+TL P S E
Sbjct: 55 EQVAASMKRDVDAQIPNYPNLPSKLLCLLHNVTLHADPETDEVYAQMTLQPVSSFDKEAL 114
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
S +P+ F K LTASDTSTHGGFSV R+ A + PPLD + TP QELVA+
Sbjct: 115 LRSDLSLKSNKPQPEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQTPAQELVAR 174
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH W+F+HI+RG+P+RHLLTTGWS FV+ KRL AGD+ +F+R E +L +G+R R
Sbjct: 175 DLHENVWKFRHIYRGKPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDETQQLLLGIRRANR 234
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NN 236
Q +++ SSV+SS SMH+G+LA A+HA A + F V+Y PR S+F+I L KY +AV N+
Sbjct: 235 QPANLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASLSEFVIPLAKYYKAVYNH 294
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+ + GMR++M FE E+S RR+ GT+ G+ D P WK+S+WR+L+V WDE + R +R
Sbjct: 295 QISPGMRFRMMFETEESGTRRYMGTITGISDIDPVRWKNSQWRNLQVGWDESTAGERRNR 354
Query: 296 VSPWEIEPFVASATPNLVQPV-LAKNKRPR----LSMEVPPLDLPSAASAPW 342
VS WEIEP A P + P L ++KRPR L+ E LD PW
Sbjct: 355 VSIWEIEPVTA---PFFICPSPLFRSKRPRQPGMLADEYSDLDNLFKRPMPW 403
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 588
R+ TKV +G AVGR++D+T GYD L +L F I+GQL R + W++VY D E D
Sbjct: 987 RTYTKVYKRG-AVGRSIDITRYSGYDELKQDLARRFGIEGQLEDRGRVGWKLVYVDHEND 1045
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++LVGDDPW EF N V+ I I S Q+V++MS
Sbjct: 1046 VLLVGDDPWEEFINCVRCIKILSPQEVQQMS 1076
>gi|359492211|ref|XP_003634382.1| PREDICTED: auxin response factor 5-like isoform 2 [Vitis vinifera]
Length = 947
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 153/309 (49%), Positives = 212/309 (68%), Gaps = 11/309 (3%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ ST + +IP + LPS+++C+V N+ L A+++TDE+YAQ++L P S+ +
Sbjct: 72 EQVAVSTKRTATSQIPNYPNLPSQLMCQVHNVTLHADKDTDEIYAQMSLQPVNSEKDIF- 130
Query: 61 PDPCPADSPRPKVHS---FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELV 117
P P +P H F K LTASDTSTHGGFSV R+ A + PPLD + PTQEL+
Sbjct: 131 --PIPDFGLKPSKHPSEFFCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYSMQPPTQELI 188
Query: 118 AKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCL 177
+DLH + F+HI+RGQP+RHLLTTGWS FV++KRL AGD +F+R E +L +GVR
Sbjct: 189 VRDLHDITYTFRHIYRGQPKRHLLTTGWSVFVSAKRLRAGDAVLFIRDEKSQLLLGVRRA 248
Query: 178 ARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV- 234
RQQ+S+PSSV+S+ SMH+GVLA A+HA A ++ F ++Y PR S+F+I L KY ++V
Sbjct: 249 NRQQTSLPSSVLSADSMHIGVLAAAAHAAANRSPFTIFYNPRACPSEFVIPLAKYRKSVY 308
Query: 235 NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRP 293
+ +VGMR+ M FE E+S +RR+ GT+VG+ D P W SKWR+L+V+WDE +
Sbjct: 309 GTQISVGMRFGMMFETEESGKRRYMGTIVGISDLDPLSWPGSKWRNLQVEWDESGCGDKQ 368
Query: 294 DRVSPWEIE 302
RVS WEIE
Sbjct: 369 SRVSSWEIE 377
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTR--TKWEIVYTDDEGD 588
R+ TKVQ G +VGR++D+ + Y+ L +E MF ++G L+ + + W++VY D E D
Sbjct: 837 RTYTKVQKMG-SVGRSIDVASFKNYEELCSAIECMFGLEGLLNDQKGSGWKLVYVDYEND 895
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++LVGDDPW EF V+ I I S +V++MS
Sbjct: 896 VLLVGDDPWKEFVGCVRCIRILSPSEVQQMS 926
>gi|359492209|ref|XP_003634381.1| PREDICTED: auxin response factor 5-like isoform 1 [Vitis vinifera]
Length = 925
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 153/309 (49%), Positives = 212/309 (68%), Gaps = 11/309 (3%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ ST + +IP + LPS+++C+V N+ L A+++TDE+YAQ++L P S+ +
Sbjct: 50 EQVAVSTKRTATSQIPNYPNLPSQLMCQVHNVTLHADKDTDEIYAQMSLQPVNSEKDIF- 108
Query: 61 PDPCPADSPRPKVHS---FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELV 117
P P +P H F K LTASDTSTHGGFSV R+ A + PPLD + PTQEL+
Sbjct: 109 --PIPDFGLKPSKHPSEFFCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYSMQPPTQELI 166
Query: 118 AKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCL 177
+DLH + F+HI+RGQP+RHLLTTGWS FV++KRL AGD +F+R E +L +GVR
Sbjct: 167 VRDLHDITYTFRHIYRGQPKRHLLTTGWSVFVSAKRLRAGDAVLFIRDEKSQLLLGVRRA 226
Query: 178 ARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV- 234
RQQ+S+PSSV+S+ SMH+GVLA A+HA A ++ F ++Y PR S+F+I L KY ++V
Sbjct: 227 NRQQTSLPSSVLSADSMHIGVLAAAAHAAANRSPFTIFYNPRACPSEFVIPLAKYRKSVY 286
Query: 235 NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRP 293
+ +VGMR+ M FE E+S +RR+ GT+VG+ D P W SKWR+L+V+WDE +
Sbjct: 287 GTQISVGMRFGMMFETEESGKRRYMGTIVGISDLDPLSWPGSKWRNLQVEWDESGCGDKQ 346
Query: 294 DRVSPWEIE 302
RVS WEIE
Sbjct: 347 SRVSSWEIE 355
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTR--TKWEIVYTDDEGD 588
R+ TKVQ G +VGR++D+ + Y+ L +E MF ++G L+ + + W++VY D E D
Sbjct: 815 RTYTKVQKMG-SVGRSIDVASFKNYEELCSAIECMFGLEGLLNDQKGSGWKLVYVDYEND 873
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++LVGDDPW EF V+ I I S +V++MS
Sbjct: 874 VLLVGDDPWKEFVGCVRCIRILSPSEVQQMS 904
>gi|242092304|ref|XP_002436642.1| hypothetical protein SORBIDRAFT_10g006440 [Sorghum bicolor]
gi|241914865|gb|EER88009.1| hypothetical protein SORBIDRAFT_10g006440 [Sorghum bicolor]
Length = 952
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 154/319 (48%), Positives = 213/319 (66%), Gaps = 9/319 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQNEPT 59
EQ+ AS ++EL+ IP + LPSK++C+++++ L A+ ETDEVYAQ+TL P +
Sbjct: 52 EQVAASMHKELDT-IPSYPSLPSKLICKLLSLTLHADSETDEVYAQMTLQPVNKYDRDAM 110
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
+ F K LTASDTSTHGGFSV R+ A + PPLD P QEL+AK
Sbjct: 111 LASELGLKQNKQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFTMQPPAQELIAK 170
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH W+F+HI+RGQP+RHLLTTGWS FV++KRL+AGD+ +F+R E +L +G+R +R
Sbjct: 171 DLHDISWKFRHIYRGQPKRHLLTTGWSVFVSTKRLLAGDSVLFIRDEKSQLLLGIRRASR 230
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNK 237
Q ++ SSV+S SMH+G+LA A+HA A + F ++Y PR S+F+I L KY +A+ +
Sbjct: 231 PQPALSSSVLSCDSMHIGILAAAAHAAANSSPFTIFYNPRASPSEFVIPLAKYNKALYTQ 290
Query: 238 FAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRV 296
++GMR++M FE EDS RR+ GT+ G+ D P WK+S WR+L+V WDE + R RV
Sbjct: 291 VSLGMRFRMLFETEDSGVRRYMGTITGIGDLDPLRWKNSHWRNLQVGWDESTASERRTRV 350
Query: 297 SPWEIEPFVASATPNLVQP 315
S WEIEP ATP + P
Sbjct: 351 SIWEIEPV---ATPFYICP 366
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 64/91 (70%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 588
R+ TKVQ +G +VGR++D+T GY+ L +L MF I+GQL RT W++VY D E D
Sbjct: 838 RTFTKVQKRG-SVGRSIDITRYRGYEDLRHDLACMFGIQGQLEDPYRTDWKLVYVDHEND 896
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++LVGDDPW EF + VK I I SS +V++MS
Sbjct: 897 ILLVGDDPWEEFVSCVKSIKILSSAEVQQMS 927
>gi|36939190|gb|AAQ86959.1| ETTIN-like auxin response factor [Triticum aestivum]
Length = 632
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 161/378 (42%), Positives = 225/378 (59%), Gaps = 16/378 (4%)
Query: 21 LPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQ-----NEPTTPDPCPADSP------ 69
+P + CRVV+++L A+ TDEVYAQ++LL + + + + + C D
Sbjct: 32 VPPHVFCRVVDVNLQADPATDEVYAQVSLLVDNEEAKRRMRQGESEEACDGDGEDTGAAK 91
Query: 70 -RPKV-HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWR 127
R ++ H F K LTASDTSTHGGFSV R+ A +C PPLD N P+QELVAKDLHG EWR
Sbjct: 92 RRARMPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYNLQRPSQELVAKDLHGTEWR 151
Query: 128 FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSS 187
F+HI+RGQPRRHLLTTGWS FV K+LV+GD +FLRGE+G L +GVR A+ ++ P
Sbjct: 152 FRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGVLQLGVRRAAQLKNVSPFP 211
Query: 188 VISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYK 245
+ +Q L L +HAVA +++F +YY PR S+FI+ K++ + + F+VGMR+K
Sbjct: 212 ALFNQDSSLRSLGNVAHAVAMKSIFHIYYNPRLCESEFIVPYWKFMRSFSQPFSVGMRFK 271
Query: 246 MRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 305
M++E ED+ ERR +G + G + SKW+ L V+WD+ R +RVSPWEIE
Sbjct: 272 MKYENEDASERRSTGMITGSRESDLKSHGSKWKCLVVRWDDDVECRRLNRVSPWEIELAG 331
Query: 306 ASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRID 365
+ + +L P +K +P L P + LPS + + A A+ H + Q K D
Sbjct: 332 SVSGSHLSSP-HSKRLKPCLPQVNPDMLLPSGSVSSDFAESARFHKVLQGQELLGSKAHD 390
Query: 366 NHVAWHHKHSDFSSNSNF 383
V + S S NF
Sbjct: 391 GTVNSASEASQASEARNF 408
>gi|218188818|gb|EEC71245.1| hypothetical protein OsI_03213 [Oryza sativa Indica Group]
Length = 714
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 153/342 (44%), Positives = 211/342 (61%), Gaps = 17/342 (4%)
Query: 25 ILCRVVNIHLMAEQETDEVYAQITLLP----------EPSQNEPTTPDPCPADSPRPKVH 74
+ CRVV++ L A+ TDEVYAQ++L+ E E PA P H
Sbjct: 85 VFCRVVDVSLHADAATDEVYAQVSLVADNEEVERRMREGEDGEGEDAVKRPARIP----H 140
Query: 75 SFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG 134
F K LTASDTSTHGGFSV R+ A +C PPLD + P+QELVAKDLHG EWRF+HI+RG
Sbjct: 141 MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSLQRPSQELVAKDLHGTEWRFRHIYRG 200
Query: 135 QPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSM 194
QPRRHLLTTGWS F+ K+LV+GD +FLRGE+GEL +GVR A+ ++ P + +Q
Sbjct: 201 QPRRHLLTTGWSGFINKKKLVSGDAVLFLRGEDGELRLGVRRAAQLKNVSPFPALHNQIS 260
Query: 195 HLGVLATASHAVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRFEGED 252
L+ +HAVA +++F +YY PR SQ FII K++ + + F+VGMR+K+R+E ED
Sbjct: 261 STSSLSEVAHAVAVKSIFHIYYNPRLSQSEFIIPYWKFMRSFSQPFSVGMRFKLRYESED 320
Query: 253 SPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL 312
+ ERR +G ++G + P W SKW+ L V+WD+ RP+ VSPWEIE + + +L
Sbjct: 321 ASERRRTGIIIGSREADPMWHGSKWKCLVVKWDDDVECRRPNGVSPWEIELSGSVSGSHL 380
Query: 313 VQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQ 354
P +K + P + LP+ + + A A+ H + Q
Sbjct: 381 STP-HSKRLKSCFPQVNPDIVLPNGSVSSDFAESARFHKVLQ 421
>gi|47496694|dbj|BAD19062.1| auxin response factor 2 [Cucumis sativus]
Length = 1107
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 162/329 (49%), Positives = 222/329 (67%), Gaps = 8/329 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPS-QNEPT 59
EQ+ AS ++++ ++P + L SK+LC + N+ L A+ ETDEVYAQ+TLLP S +
Sbjct: 58 EQVAASLRKDVDGQVPNYPSLASKLLCLLHNVTLHADPETDEVYAQMTLLPVLSFDKDAL 117
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
S +P+ F K LTASDTSTHGGFSV R+ A + PPLD + P QELVAK
Sbjct: 118 LRSDLALKSNKPQPEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVAK 177
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH W F+HI+RGQP+RHLLTTGWS FV+ KRL+AGD+ +F+R E +L +G+R R
Sbjct: 178 DLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLLAGDSVLFIRDEKQQLLLGIRRANR 237
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVN-N 236
Q +++ SSV+SS SMH+G+LA A+HA A + F V+Y PR S+F+I L KY +AV+ N
Sbjct: 238 QPTNLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVIPLAKYYKAVSAN 297
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+ ++GMR++M FE E+S RR+ GT+ G+ D P WK S+WR+L+V WDE R +R
Sbjct: 298 QISLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKGSQWRNLQVGWDESTGGERRNR 357
Query: 296 VSPWEIEPFVASATPNLVQPVLAKNKRPR 324
VS WEIEP +A + P ++KRPR
Sbjct: 358 VSVWEIEPVIAPFF--ICPPPFLRSKRPR 384
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 588
R+ TKV +G AVGR++D+ GYD L +L F I+GQL R K W++VY D E D
Sbjct: 995 RTYTKVYKRG-AVGRSIDIARYSGYDELKQDLARRFGIEGQLEDRQKIGWKLVYVDHEND 1053
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++LVGDDPW +F N V+ I I S Q+V++MS
Sbjct: 1054 VLLVGDDPWDDFVNCVRSIKILSPQEVQQMS 1084
>gi|24785191|dbj|BAC23059.1| hypothetical protein [Nicotiana tabacum]
Length = 648
Score = 291 bits (745), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 148/263 (56%), Positives = 184/263 (69%), Gaps = 4/263 (1%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
M+QLE S+N E Q + L LP KILCRV++I L+ E +T+EVYA+ LLP QNEP+T
Sbjct: 50 MDQLEQSSNLEWIQGLQLSHLPRKILCRVLHIRLLVEHDTEEVYAETILLPNQEQNEPST 109
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
P+ CP + PRP+ SF K LT SD ++ G SV RK A +C PPLDM Q PTQEL+ D
Sbjct: 110 PEFCPLEPPRPQYQSFCKALTTSDIKSNWGLSVHRKDANKCFPPLDMMQEKPTQELIVND 169
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
L G EWRFKH+F+GQPRRHLL GWSTFVTSK+L+AGD VFLR E G+LHVG+R L+ Q
Sbjct: 170 LQGNEWRFKHVFQGQPRRHLLKHGWSTFVTSKKLLAGDLVVFLRDETGKLHVGIRRLSYQ 229
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKP---RTSQFIISLNKYLEAVNNK 237
+S+ SS S QSM GVLA ASHA AT+++F VYYKP R+SQFI+SL+ Y E N+
Sbjct: 230 CNSVGSSTFSRQSME-GVLAVASHAFATRSLFSVYYKPCYNRSSQFIMSLSNYFEGGNHG 288
Query: 238 FAVGMRYKMRFEGEDSPERRFSG 260
VG + + DS +R SG
Sbjct: 289 PGVGTISRTQHTSLDSHVKRTSG 311
>gi|225444647|ref|XP_002276637.1| PREDICTED: auxin response factor 19-like [Vitis vinifera]
Length = 1084
Score = 291 bits (744), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 152/309 (49%), Positives = 208/309 (67%), Gaps = 6/309 (1%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQN-EPT 59
EQ+ AS +E + +P + LPSK++C + N+ L A+ ETDEVYAQ+TL P + E
Sbjct: 51 EQVAASMQKE-TECVPSYPNLPSKLICMLHNVTLHADAETDEVYAQMTLQPVSKYDKEAL 109
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
R V F K LTASDTSTHGGFSV R+ A + PPLD + P QE+VA+
Sbjct: 110 LASDLGLKQSRQPVEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAR 169
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH W F+HI+RGQP+RHLLTTGWS FV++KRL AGD+ +F+R E +L +G+R R
Sbjct: 170 DLHDNTWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDEKSQLLLGIRRANR 229
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNK 237
QQ ++ SSVIS SMH+G+LA A+HA A + F ++Y PR S+F+I L KY +A+ +
Sbjct: 230 QQPALSSSVISCDSMHIGILAAAAHAAANNSPFTIFYNPRASPSEFVIPLAKYNKAMYTQ 289
Query: 238 FAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRV 296
++GMR++M FE E+S RR+ GT+ G+ + + WK+S+WR+L+V WDE + RP RV
Sbjct: 290 VSLGMRFRMMFETEESGVRRYMGTITGISELDAARWKNSQWRNLQVGWDESTAGERPSRV 349
Query: 297 SPWEIEPFV 305
S WEIEP V
Sbjct: 350 SIWEIEPVV 358
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 64/91 (70%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 588
R+ TKVQ +G +VGR++D+T GYD L +L MF I+GQL RT W++VY D E D
Sbjct: 957 RTYTKVQKRG-SVGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTDWKLVYVDHEND 1015
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++LVGDDPW EF + V+ I I SS +V++MS
Sbjct: 1016 ILLVGDDPWEEFVSCVQSIKILSSAEVQQMS 1046
>gi|297738525|emb|CBI27770.3| unnamed protein product [Vitis vinifera]
Length = 878
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 152/309 (49%), Positives = 208/309 (67%), Gaps = 6/309 (1%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQN-EPT 59
EQ+ AS +E + +P + LPSK++C + N+ L A+ ETDEVYAQ+TL P + E
Sbjct: 51 EQVAASMQKE-TECVPSYPNLPSKLICMLHNVTLHADAETDEVYAQMTLQPVSKYDKEAL 109
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
R V F K LTASDTSTHGGFSV R+ A + PPLD + P QE+VA+
Sbjct: 110 LASDLGLKQSRQPVEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAR 169
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH W F+HI+RGQP+RHLLTTGWS FV++KRL AGD+ +F+R E +L +G+R R
Sbjct: 170 DLHDNTWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDEKSQLLLGIRRANR 229
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNK 237
QQ ++ SSVIS SMH+G+LA A+HA A + F ++Y PR S+F+I L KY +A+ +
Sbjct: 230 QQPALSSSVISCDSMHIGILAAAAHAAANNSPFTIFYNPRASPSEFVIPLAKYNKAMYTQ 289
Query: 238 FAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRV 296
++GMR++M FE E+S RR+ GT+ G+ + + WK+S+WR+L+V WDE + RP RV
Sbjct: 290 VSLGMRFRMMFETEESGVRRYMGTITGISELDAARWKNSQWRNLQVGWDESTAGERPSRV 349
Query: 297 SPWEIEPFV 305
S WEIEP V
Sbjct: 350 SIWEIEPVV 358
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 64/91 (70%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 588
R+ TKVQ +G +VGR++D+T GYD L +L MF I+GQL RT W++VY D E D
Sbjct: 751 RTYTKVQKRG-SVGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTDWKLVYVDHEND 809
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++LVGDDPW EF + V+ I I SS +V++MS
Sbjct: 810 ILLVGDDPWEEFVSCVQSIKILSSAEVQQMS 840
>gi|297736017|emb|CBI24055.3| unnamed protein product [Vitis vinifera]
Length = 1034
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 161/329 (48%), Positives = 222/329 (67%), Gaps = 8/329 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQN-EPT 59
EQ+ AS ++++ +IP + LPS++LC + N+ L A+ ETDEVYAQ+TL P P+ + E
Sbjct: 57 EQVAASMKKDVDAQIPNYPNLPSRLLCILHNVTLHADPETDEVYAQMTLQPVPAYDKESL 116
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
+ +P+ F K LTASDTSTHGGFSV R+ A + PPLD + P QELVAK
Sbjct: 117 LRSDLALKTNKPQTDFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVAK 176
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH W F+HI+RGQP+RHLLTTGWS FV+ KRL AGD +F+R E +L +G+R R
Sbjct: 177 DLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDAVLFIRDEKQQLLLGIRRANR 236
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NN 236
Q +++ SSV+SS SMH+G+LA A+HA A + F V+Y PR S+F+I L KY +A +N
Sbjct: 237 QPTNLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVIPLAKYYKAAYSN 296
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+ ++GMR++M FE E+S RR+ GT+ G+ D P WK+S+WR+L+V WDE + R +R
Sbjct: 297 QISLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGERRNR 356
Query: 296 VSPWEIEPFVASATPNLVQPVLAKNKRPR 324
VS WEIEP A + P ++KRPR
Sbjct: 357 VSIWEIEPVTAPFF--ICPPPFFRSKRPR 383
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 588
R+ TKV +G AVGR++D+T GYD L +L F I+GQL R + W++VY D E D
Sbjct: 922 RTYTKVYKRG-AVGRSIDITRYSGYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEND 980
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++LVGDDPW EF N V+ I I S Q+V++MS
Sbjct: 981 VLLVGDDPWEEFVNCVRCIKILSPQEVQQMS 1011
>gi|310697414|gb|ADP06662.1| auxin response factor 13-1 [Solanum lycopersicum]
Length = 451
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 144/255 (56%), Positives = 181/255 (70%), Gaps = 4/255 (1%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
+EQLE S+NQEL +++ L LP KILCRV++I L+ E ET+EVYA+ L+P QNEPT
Sbjct: 54 VEQLEQSSNQELIEKLQLSNLPPKILCRVLHIRLLVEHETEEVYAETILIPNQDQNEPTA 113
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
D P D+PRP+ SF K LT SD ++ G SV K A +C PPLDM Q P QEL+AKD
Sbjct: 114 ADFSPLDNPRPQFQSFCKCLTQSDIKSNWGLSVPLKDAVKCFPPLDMRQEKPCQELIAKD 173
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
L G EWRFKH +GQPRRH LT GWSTFVTSK+L+AGD VFLR E G+LHVG+R L+ Q
Sbjct: 174 LKGNEWRFKHAHQGQPRRHSLTNGWSTFVTSKKLLAGDLVVFLRDETGKLHVGIRRLSYQ 233
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKP---RTSQFIISLNKYLEAVNNK 237
S+ +S S QSM + VLA ASHA AT+++F VY KP ++SQFI+S++KY E N+
Sbjct: 234 HCSVGASTFSRQSMEV-VLAVASHAFATKSLFFVYQKPCYNKSSQFIMSMSKYFEGGNHG 292
Query: 238 FAVGMRYKMRFEGED 252
VGM +M+ E ED
Sbjct: 293 IGVGMISRMQIESED 307
>gi|302142628|emb|CBI19831.3| unnamed protein product [Vitis vinifera]
Length = 907
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 153/314 (48%), Positives = 212/314 (67%), Gaps = 16/314 (5%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ ST + +IP + LPS+++C+V N+ L A+++TDE+YAQ++L P S+ +
Sbjct: 73 EQVAVSTKRTATSQIPNYPNLPSQLMCQVHNVTLHADKDTDEIYAQMSLQPVNSEKDIF- 131
Query: 61 PDPCPADSPRPKVHS---FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELV 117
P P +P H F K LTASDTSTHGGFSV R+ A + PPLD + PTQEL+
Sbjct: 132 --PIPDFGLKPSKHPSEFFCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYSMQPPTQELI 189
Query: 118 AKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCL 177
+DLH + F+HI+RGQP+RHLLTTGWS FV++KRL AGD +F+R E +L +GVR
Sbjct: 190 VRDLHDITYTFRHIYRGQPKRHLLTTGWSVFVSAKRLRAGDAVLFIRDEKSQLLLGVRRA 249
Query: 178 ARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPR-------TSQFIISLNKY 230
RQQ+S+PSSV+S+ SMH+GVLA A+HA A ++ F ++Y PR S+F+I L KY
Sbjct: 250 NRQQTSLPSSVLSADSMHIGVLAAAAHAAANRSPFTIFYNPRHAFFLACPSEFVIPLAKY 309
Query: 231 LEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPA 288
++V + +VGMR+ M FE E+S +RR+ GT+VG+ D P W SKWR+L+V+WDE
Sbjct: 310 RKSVYGTQISVGMRFGMMFETEESGKRRYMGTIVGISDLDPLSWPGSKWRNLQVEWDESG 369
Query: 289 SITRPDRVSPWEIE 302
+ RVS WEIE
Sbjct: 370 CGDKQSRVSSWEIE 383
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTR--TKWEIVYTDDEGD 588
R+ TKVQ G +VGR++D+ + Y+ L +E MF ++G L+ + + W++VY D E D
Sbjct: 797 RTYTKVQKMG-SVGRSIDVASFKNYEELCSAIECMFGLEGLLNDQKGSGWKLVYVDYEND 855
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++LVGDDPW EF V+ I I S +V++MS
Sbjct: 856 VLLVGDDPWKEFVGCVRCIRILSPSEVQQMS 886
>gi|350536075|ref|NP_001234740.1| auxin response factor 19 [Solanum lycopersicum]
gi|298570957|gb|ADI87602.1| auxin response factor 19 [Solanum lycopersicum]
gi|307091363|gb|ADN28050.1| auxin response factor 19 [Solanum lycopersicum]
Length = 1112
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 162/332 (48%), Positives = 223/332 (67%), Gaps = 11/332 (3%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPS-QNEPT 59
EQ+ AS ++++ +IP + LPSK++C + NI L A+ E DEVYAQ+TL P PS E
Sbjct: 59 EQVAASMKKDVDAQIPNYPNLPSKLVCLLHNITLHADPEADEVYAQMTLQPVPSFDKEAL 118
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
+ +P+ F K LTASDTSTHGGFSV R+ A + PPLD + P QELVA+
Sbjct: 119 LRSDLSMKANKPQTEFFCKTLTASDTSTHGGFSVPRRSAEKIFPPLDYSMQPPAQELVAR 178
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH W F+HI+RGQP+RHLLTTGWS FV+ KRL AGD+ +F+R E +L +G+R R
Sbjct: 179 DLHDNLWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR 238
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NN 236
Q +++ SSV+SS SMH+G+LA A+HA A + F V+Y PR S+F+I L KY +A ++
Sbjct: 239 QPTNLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASHSEFVIPLAKYYKATYSS 298
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+ ++GMR++M FE E+S RR+ GT+ G+ D P WK+S+WR+L+V WDE + R +R
Sbjct: 299 QVSLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGERRNR 358
Query: 296 VSPWEIEPFVASATPNLVQPV--LAKNKRPRL 325
VS WEIEP A P + P ++KRPRL
Sbjct: 359 VSIWEIEPVTA---PFFICPTPPFFRSKRPRL 387
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 588
R+ TKV +G AVGR++D+ GY+ L +L F I+GQL R + W++VY D E D
Sbjct: 1001 RTFTKVHKRG-AVGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEND 1059
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++LVGDDPW EF N V+ I I S Q+V+++S
Sbjct: 1060 VLLVGDDPWEEFVNCVRCIKILSPQEVQQIS 1090
>gi|359484941|ref|XP_002266603.2| PREDICTED: auxin response factor 5-like [Vitis vinifera]
Length = 1117
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 161/329 (48%), Positives = 222/329 (67%), Gaps = 8/329 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQN-EPT 59
EQ+ AS ++++ +IP + LPS++LC + N+ L A+ ETDEVYAQ+TL P P+ + E
Sbjct: 59 EQVAASMKKDVDAQIPNYPNLPSRLLCILHNVTLHADPETDEVYAQMTLQPVPAYDKESL 118
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
+ +P+ F K LTASDTSTHGGFSV R+ A + PPLD + P QELVAK
Sbjct: 119 LRSDLALKTNKPQTDFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVAK 178
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH W F+HI+RGQP+RHLLTTGWS FV+ KRL AGD +F+R E +L +G+R R
Sbjct: 179 DLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDAVLFIRDEKQQLLLGIRRANR 238
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NN 236
Q +++ SSV+SS SMH+G+LA A+HA A + F V+Y PR S+F+I L KY +A +N
Sbjct: 239 QPTNLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVIPLAKYYKAAYSN 298
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+ ++GMR++M FE E+S RR+ GT+ G+ D P WK+S+WR+L+V WDE + R +R
Sbjct: 299 QISLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGERRNR 358
Query: 296 VSPWEIEPFVASATPNLVQPVLAKNKRPR 324
VS WEIEP A + P ++KRPR
Sbjct: 359 VSIWEIEPVTAPFF--ICPPPFFRSKRPR 385
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 588
R+ TKV +G AVGR++D+T GYD L +L F I+GQL R + W++VY D E D
Sbjct: 1005 RTYTKVYKRG-AVGRSIDITRYSGYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEND 1063
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++LVGDDPW EF N V+ I I S Q+V++MS
Sbjct: 1064 VLLVGDDPWEEFVNCVRCIKILSPQEVQQMS 1094
>gi|295844332|gb|ADG43163.1| auxin response factor 29 [Zea mays]
Length = 945
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 154/307 (50%), Positives = 208/307 (67%), Gaps = 7/307 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ A+T + N RIP + LP ++LC+V NI L A++ETDE+Y Q+TL P S+ +
Sbjct: 67 EQVAATTKKIPNSRIPNYPSLPPQLLCQVHNITLHADKETDEIYCQMTLQPLHSETD-VF 125
Query: 61 PDPCPADSPRPK--VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
P P + K F K LTASDTSTHGGFSV R+ A + P LD + P QEL+
Sbjct: 126 PIPTLGAYTKSKHPTEYFCKNLTASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIV 185
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
+DLH W F+HI+RGQP+RHLLTTGWS FV +KRL AGD+ +F+R E +L VGVR
Sbjct: 186 RDLHDNMWTFRHIYRGQPKRHLLTTGWSLFVGAKRLKAGDSVLFIRDEKSQLLVGVRRAT 245
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNN 236
RQQ ++ SSV+S+ SMH+GVLA A+HA ++ F +YY PRT S F+I L +Y +A
Sbjct: 246 RQQPALSSSVLSTDSMHIGVLAAAAHAASSGGSFTIYYNPRTSPSPFVIPLARYNKATYL 305
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+ +VGMR+ M FE E+S +RR +G +VG+ D+ P W +SKWR+L+V+WDE RP+R
Sbjct: 306 QPSVGMRFAMMFETEESSKRRCTGAIVGISDYDPMRWPNSKWRNLQVEWDEHGYGERPER 365
Query: 296 VSPWEIE 302
VS W+IE
Sbjct: 366 VSIWDIE 372
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 57/91 (62%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 588
R+ TKVQ G +VGR +D+T Y L + MF ++G+L + W++VY D E D
Sbjct: 842 RTYTKVQKLG-SVGRCIDVTRFRDYHELRSAIACMFGLQGKLEHPGSSDWKLVYVDYEND 900
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++LVGDDPW EF N V+ I I S +V++MS
Sbjct: 901 VLLVGDDPWEEFINCVRCIRILSPSEVQQMS 931
>gi|353703790|ref|NP_001238801.1| auxin response factor 13 [Solanum lycopersicum]
gi|310697412|gb|ADP06661.1| auxin response factor 13 [Solanum lycopersicum]
Length = 472
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 144/255 (56%), Positives = 181/255 (70%), Gaps = 4/255 (1%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
+EQLE S+NQEL +++ L LP KILCRV++I L+ E ET+EVYA+ L+P QNEPT
Sbjct: 54 VEQLEQSSNQELIEKLQLSNLPPKILCRVLHIRLLVEHETEEVYAETILIPNQDQNEPTA 113
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
D P D+PRP+ SF K LT SD ++ G SV K A +C PPLDM Q P QEL+AKD
Sbjct: 114 ADFSPLDNPRPQFQSFCKCLTQSDIKSNWGLSVPLKDAVKCFPPLDMRQEKPCQELIAKD 173
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
L G EWRFKH +GQPRRH LT GWSTFVTSK+L+AGD VFLR E G+LHVG+R L+ Q
Sbjct: 174 LKGNEWRFKHAHQGQPRRHSLTNGWSTFVTSKKLLAGDLVVFLRDETGKLHVGIRRLSYQ 233
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKP---RTSQFIISLNKYLEAVNNK 237
S+ +S S QSM + VLA ASHA AT+++F VY KP ++SQFI+S++KY E N+
Sbjct: 234 HCSVGASTFSRQSMEV-VLAVASHAFATKSLFFVYQKPCYNKSSQFIMSMSKYFEGGNHG 292
Query: 238 FAVGMRYKMRFEGED 252
VGM +M+ E ED
Sbjct: 293 IGVGMISRMQIESED 307
>gi|379323206|gb|AFD01302.1| auxin response factor 6 [Brassica rapa subsp. pekinensis]
Length = 832
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 162/328 (49%), Positives = 221/328 (67%), Gaps = 8/328 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ ASTN+E++ P + L +++C++ N+ + A+ ETDEVYAQ+TL P +Q + +
Sbjct: 55 EQVAASTNKEVDAHTPNYPSLQPQLICQLHNVTMHADVETDEVYAQMTLQPLNAQEQKDS 114
Query: 61 PDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
P R + F K LTASDTSTHGGFSV R+ A + PPLD Q P QEL+A+
Sbjct: 115 YLAAELGVPSRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYTQQPPAQELMAR 174
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ + +L +G+R R
Sbjct: 175 DLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRAHR 234
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAV-NN 236
Q+ MPSSV+SS SMHLG+LA A+HA T + F ++Y PR TS+F+I L KY++AV +
Sbjct: 235 PQTVMPSSVLSSDSMHLGLLAAAAHAAPTNSRFTIFYNPRASTSEFVIPLAKYVKAVYHT 294
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+ +VGMR++M FE E+S RR+ GT+ G+ D P W +S WRS+KV WDE + R R
Sbjct: 295 RVSVGMRFRMLFETEESSVRRYMGTITGICDLDPARWANSHWRSVKVGWDESTAGDRQPR 354
Query: 296 VSPWEIEPFVASATPNLVQPVLAKNKRP 323
VS WEIEP + P P + KRP
Sbjct: 355 VSLWEIEPL--TTFPMYPSPFPLRLKRP 380
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 15/86 (17%)
Query: 535 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLV 592
KV G + GR+LD+T Y+ L EL MF ++GQL R+ W++V+ E
Sbjct: 709 KVYKSG-SFGRSLDITKFSSYNELRSELARMFGLEGQLEDPVRSGWQLVFVGRE------ 761
Query: 593 GDDPWHEFCNMVKRIFICSSQDVKKM 618
EF + V I I S Q+V++M
Sbjct: 762 ------EFVSSVWCIKILSPQEVQQM 781
>gi|147770011|emb|CAN65414.1| hypothetical protein VITISV_009739 [Vitis vinifera]
Length = 831
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 148/327 (45%), Positives = 200/327 (61%), Gaps = 44/327 (13%)
Query: 19 FRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPK------ 72
+ LP + CRVV++ L AE TDEVYAQ++L+PE + AD +
Sbjct: 87 YDLPPHVFCRVVDVKLHAEVVTDEVYAQVSLVPETKIKQKLQEGEIEADGGEEEDIEGSI 146
Query: 73 ----VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRF 128
H F K LTASDTSTHGGFSV R+ A +C PPLD Q P+QELVAKDLHG+EWRF
Sbjct: 147 KSMTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGFEWRF 206
Query: 129 KHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSV 188
+HI+RGQPRRHLLTTGWS FV K+LV+GD +FLRG +GEL +G+R A+ + S P
Sbjct: 207 RHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGGDGELRLGIRRAAQIKGSSPFPA 266
Query: 189 ISSQSMHLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKM 246
+ SQ ++L L +A++T+++F + Y PR +S+FII L K+ +++++ F+ GMR+KM
Sbjct: 267 LCSQQLNLNTLTAVVNAISTRSVFNICYNPRASSSEFIIPLRKFSKSIDHSFSAGMRFKM 326
Query: 247 RFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWR--------------------------- 278
R E ED+ ERR++G + G+ D P W SKWR
Sbjct: 327 RVETEDAAERRYTGLITGISDMDPVRWPGSKWRCLLLHHSHGSECVLLPCLPYYSDSATF 386
Query: 279 ---SLKVQWDEPASITRPDRVSPWEIE 302
SL+V+WD+ R +RVSPWEIE
Sbjct: 387 FDLSLQVRWDD-IEANRHNRVSPWEIE 412
>gi|242058293|ref|XP_002458292.1| hypothetical protein SORBIDRAFT_03g030740 [Sorghum bicolor]
gi|241930267|gb|EES03412.1| hypothetical protein SORBIDRAFT_03g030740 [Sorghum bicolor]
Length = 702
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 154/350 (44%), Positives = 214/350 (61%), Gaps = 17/350 (4%)
Query: 21 LPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQN-----------EPTTPDPCPADSP 69
+P +LCRVV++ L A+ TDEVYA+++LLPE + E D +
Sbjct: 77 VPPHVLCRVVDVTLHADGATDEVYARVSLLPEDEEAERRARARVREDEDADRDGEDGAAM 136
Query: 70 RPKV---HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEW 126
+P H F K LTASDTSTHGGFSV R+ A +C PPLD +Q P+QELVAKDLHG EW
Sbjct: 137 KPLARTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEW 196
Query: 127 RFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPS 186
+F+HI+RGQPRRHLLTTGWS FV K+LV+GD +FLRGE+G L +GVR A+ + P
Sbjct: 197 KFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGVLRLGVRRAAQLKIVTPI 256
Query: 187 SVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRY 244
+ +Q L + AVAT+T+F +YY PR SQ FI+ K+ ++N +VGMR
Sbjct: 257 PALHNQCSSQTTLGNVAQAVATRTVFHIYYNPRLSQSEFIVPYWKFTRSLNQPISVGMRC 316
Query: 245 KMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 304
+MR+E +D+ ERR +G ++G + P W SKW+ L V+WD+ P+RVSPWEIE
Sbjct: 317 RMRYESDDASERRCTGIIIGSREAEPIWYGSKWKCLVVRWDDGIECHWPNRVSPWEIEVT 376
Query: 305 VASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQ 354
+ + ++ P +K +P L P + LP+ + + A + H + Q
Sbjct: 377 GSVSGSHMCAPN-SKRLKPCLPQVNPEIVLPNGSVSSDFAGSVRFHKVLQ 425
>gi|293334419|ref|NP_001170123.1| uncharacterized protein LOC100384045 [Zea mays]
gi|224033653|gb|ACN35902.1| unknown [Zea mays]
gi|295844298|gb|ADG43146.1| auxin response factor 12 [Zea mays]
gi|407232694|gb|AFT82689.1| ARF12 ARF type transcription factor, partial [Zea mays subsp. mays]
gi|414881063|tpg|DAA58194.1| TPA: auxin response factor 12 [Zea mays]
Length = 708
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 154/351 (43%), Positives = 211/351 (60%), Gaps = 18/351 (5%)
Query: 21 LPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTP------------DPCPADS 68
+P +LCRVV++ L A+ TDEVYA+++LLPE E D +
Sbjct: 77 VPPHVLCRVVDVTLHADGATDEVYARVSLLPEDEDAEKRAQAQARVREDEDRRDGEDGGA 136
Query: 69 PRPKV---HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYE 125
RP H F K LTASDTSTHGGFSV R+ A +C PPLD +Q P+QELVAKDLHG E
Sbjct: 137 MRPLARTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTE 196
Query: 126 WRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMP 185
W+F+HI+RGQPRRHLLTTGWS FV K+L++GD +FLRGE+G L +GVR A+ + P
Sbjct: 197 WKFRHIYRGQPRRHLLTTGWSAFVNRKKLISGDAVLFLRGEDGVLRLGVRRAAQLKIVTP 256
Query: 186 SSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMR 243
+Q L + AVAT+T+F +YY PR +Q FI+ K+ + N +VGMR
Sbjct: 257 IPAPHNQCSSNSNLGNVAQAVATKTVFHIYYNPRLTQSEFIVPYWKFTRSFNQPISVGMR 316
Query: 244 YKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEP 303
+MR+E +D+ ERR +G ++G + P W SKW+ L V+WD+ P+RVSPWEIE
Sbjct: 317 CRMRYESDDASERRCTGIIIGSREADPIWYGSKWKCLVVRWDDGIECRWPNRVSPWEIEL 376
Query: 304 FVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQ 354
+ + + P +K +P L P + LP+ + + A A+ H + Q
Sbjct: 377 TGSVSGSQMCAPS-SKRLKPCLPQVNPEIVLPNGSVSSDFAGSARFHKVLQ 426
>gi|414881064|tpg|DAA58195.1| TPA: hypothetical protein ZEAMMB73_535248 [Zea mays]
Length = 698
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 154/351 (43%), Positives = 211/351 (60%), Gaps = 18/351 (5%)
Query: 21 LPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTP------------DPCPADS 68
+P +LCRVV++ L A+ TDEVYA+++LLPE E D +
Sbjct: 77 VPPHVLCRVVDVTLHADGATDEVYARVSLLPEDEDAEKRAQAQARVREDEDRRDGEDGGA 136
Query: 69 PRPKV---HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYE 125
RP H F K LTASDTSTHGGFSV R+ A +C PPLD +Q P+QELVAKDLHG E
Sbjct: 137 MRPLARTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTE 196
Query: 126 WRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMP 185
W+F+HI+RGQPRRHLLTTGWS FV K+L++GD +FLRGE+G L +GVR A+ + P
Sbjct: 197 WKFRHIYRGQPRRHLLTTGWSAFVNRKKLISGDAVLFLRGEDGVLRLGVRRAAQLKIVTP 256
Query: 186 SSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMR 243
+Q L + AVAT+T+F +YY PR +Q FI+ K+ + N +VGMR
Sbjct: 257 IPAPHNQCSSNSNLGNVAQAVATKTVFHIYYNPRLTQSEFIVPYWKFTRSFNQPISVGMR 316
Query: 244 YKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEP 303
+MR+E +D+ ERR +G ++G + P W SKW+ L V+WD+ P+RVSPWEIE
Sbjct: 317 CRMRYESDDASERRCTGIIIGSREADPIWYGSKWKCLVVRWDDGIECRWPNRVSPWEIEL 376
Query: 304 FVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQ 354
+ + + P +K +P L P + LP+ + + A A+ H + Q
Sbjct: 377 TGSVSGSQMCAPS-SKRLKPCLPQVNPEIVLPNGSVSSDFAGSARFHKVLQ 426
>gi|255557566|ref|XP_002519813.1| Auxin response factor, putative [Ricinus communis]
gi|223541052|gb|EEF42609.1| Auxin response factor, putative [Ricinus communis]
Length = 1109
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 160/329 (48%), Positives = 222/329 (67%), Gaps = 8/329 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPS-QNEPT 59
EQ+ AS ++++ +IP + LPSK+ C + N+ L A+ ETDEVYAQ+TL P PS +
Sbjct: 63 EQVAASMKKDVDAQIPNYPNLPSKLFCLLHNVTLHADPETDEVYAQMTLQPVPSFDKDAL 122
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
S +P+ F K LTASDTSTHGGFSV R+ A + PPLD + P QELVA+
Sbjct: 123 LRSDLTLKSNKPQTDFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVAR 182
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH W F+HI+RGQP+RHLLTTGWS FV+ KRL AGD+ +F+R + +L +G+R R
Sbjct: 183 DLHDNIWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDDKQQLLLGIRRANR 242
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NN 236
Q +++ SSV+SS SMH+G+LA A+HA A + F V+Y PR S+F+I L KY +AV +N
Sbjct: 243 QPANLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVIPLAKYYKAVCSN 302
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+ ++GMR++M FE E+S RR+ GT+ G+ D P WK+S+WR+L+V WDE + + +R
Sbjct: 303 QISLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNR 362
Query: 296 VSPWEIEPFVASATPNLVQPVLAKNKRPR 324
VS WEIEP A + P ++KRPR
Sbjct: 363 VSIWEIEPVTAPFF--ICPPPFFRSKRPR 389
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 588
R+ TKV +G AVGR++D+T GY L +L F I+GQL R + W++VY D E D
Sbjct: 997 RTYTKVYKRG-AVGRSIDITRYSGYVELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEND 1055
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++LVGDDPW EF N V+ I I S Q+V++MS
Sbjct: 1056 VLLVGDDPWEEFVNCVRCIKILSPQEVQQMS 1086
>gi|3228517|gb|AAC23589.1| ETTIN [Arabidopsis thaliana]
Length = 608
Score = 288 bits (737), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 149/331 (45%), Positives = 204/331 (61%), Gaps = 15/331 (4%)
Query: 18 LFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTP------DPCPADSPRP 71
++ LP + CR++++ L AE TDEVYAQ++LLPE E D D
Sbjct: 91 IYGLPPHVFCRILDVKLHAETTTDEVYAQVSLLPESEDIERKVREGIIDVDGGEEDYEVL 150
Query: 72 KV----HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWR 127
K H F K LTASDTSTHGGFSV R+ A +C PPLD +Q P+QEL+A+DLHG EWR
Sbjct: 151 KRSNTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWR 210
Query: 128 FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSS 187
F+HI+RGQPRRHLLTTGWS FV K+LV+GD +FLRG++G+L +GVR ++ + + S
Sbjct: 211 FRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGTAALS 270
Query: 188 VISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYK 245
+Q+M+ + +HA++T ++F + Y P+ S FII K+L+ V+ F +GMR+K
Sbjct: 271 AQYNQNMNHNNFSEVAHAISTHSVFSISYNPKASWSNFIIPAPKFLKVVDYPFCIGMRFK 330
Query: 246 MRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 304
R E ED+ ERR G + G+ D P W SKWR L V+WD+ + RVSPWEIEP
Sbjct: 331 ARVESEDASERRSPGIISGISDLDPIRWPGSKWRCLLVRWDDIVANGHQQRVSPWEIEP- 389
Query: 305 VASATPNLVQPVLAKNKRPRLSMEVPPLDLP 335
+ + N V KR R+ + D+P
Sbjct: 390 -SGSISNSGSFVTTGPKRSRIGISSGKPDIP 419
>gi|301793229|emb|CBA12005.1| putative auxin response factor 3/4, partial [Cycas rumphii]
Length = 811
Score = 288 bits (737), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 151/268 (56%), Positives = 195/268 (72%), Gaps = 9/268 (3%)
Query: 82 ASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL 141
ASDTSTHGGFSV R+ A +C PPLD NQ P+QEL+AKDLHG EWRF+HI+RGQPRRHLL
Sbjct: 1 ASDTSTHGGFSVPRRAAEDCFPPLDYNQQRPSQELLAKDLHGVEWRFRHIYRGQPRRHLL 60
Query: 142 TTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLAT 201
TTGWS FV K LV+GD +FLR ENGEL +G+R +RQQS +PSSV+SSQSMHLGVLA
Sbjct: 61 TTGWSVFVGQKGLVSGDAVLFLRDENGELRLGIRRASRQQSVVPSSVVSSQSMHLGVLAA 120
Query: 202 ASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFS 259
A++AV+T++MF ++Y PR S +FII KY+++ + ++GMR+KMRFE ED+ ERR++
Sbjct: 121 AANAVSTKSMFHIFYNPRASPAEFIIPYQKYVKSCSQPLSIGMRFKMRFETEDAAERRYT 180
Query: 260 GTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLA 318
G + G+ D P W SKWRSL V WDE A+ + +RVSPWEIEP ++ + L P +
Sbjct: 181 GIITGIGDVDPTRWPGSKWRSLMVGWDEHAANEQQERVSPWEIEPSISVS--GLSIPSCS 238
Query: 319 KNKRPRLSMEVPPLDLPSAASAPWSARL 346
+ KR R ++ P+D S P RL
Sbjct: 239 RIKRLRTNLPSTPVDF----SVPDGGRL 262
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 77/190 (40%), Positives = 106/190 (55%), Gaps = 14/190 (7%)
Query: 446 RKTETGTSCRLFGIELINH--ATSSAPSEKVPVSSLTTEGH--------IISTISAAADS 495
R + SC+LFGI LI A S +P + +G + S+I+ + D
Sbjct: 572 RDIQGKHSCKLFGISLIKEPACMDDAISSGIPPDGVAQDGSHATYGRGLVQSSIAQSQDQ 631
Query: 496 DGKSDI---AKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTL 552
K + + K EQ + K S+ S RS TKV QG AVGRA+DL+ L
Sbjct: 632 LLKDSLDHPGRSACLKGSEQQMTTQKVSKGPTLVQASGRSCTKVHKQGNAVGRAVDLSKL 691
Query: 553 VGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICS 611
GYD LI ELE +F+++G L+ K W++VYTD E DMMLVGDDPW EFCN+V +I I +
Sbjct: 692 DGYDELISELERLFNMEGLLNDPDKGWQVVYTDSEDDMMLVGDDPWQEFCNIVCKILIYT 751
Query: 612 SQDVKKMSPG 621
+++KK +PG
Sbjct: 752 HEELKKWTPG 761
>gi|15226178|ref|NP_180942.1| auxin response factor 3 [Arabidopsis thaliana]
gi|46395605|sp|O23661.2|ARFC_ARATH RecName: Full=Auxin response factor 3; AltName: Full=Protein ETTIN
gi|12484199|gb|AAG53998.1|AF336917_1 auxin response transcription factor 3 [Arabidopsis thaliana]
gi|13430802|gb|AAK26023.1|AF360313_1 auxin response transcription factor 3 (ETTIN/ARF3) [Arabidopsis
thaliana]
gi|3805770|gb|AAC69148.1| auxin response transcription factor 3 (ETTIN/ARF3) [Arabidopsis
thaliana]
gi|15810653|gb|AAL07251.1| auxin response transcription factor 3 [Arabidopsis thaliana]
gi|330253806|gb|AEC08900.1| auxin response factor 3 [Arabidopsis thaliana]
Length = 608
Score = 288 bits (737), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 149/331 (45%), Positives = 203/331 (61%), Gaps = 15/331 (4%)
Query: 18 LFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTP------DPCPADSPRP 71
++ LP + CR++++ L AE TDEVYAQ++LLPE E D D
Sbjct: 91 IYGLPPHVFCRILDVKLHAETTTDEVYAQVSLLPESEDIERKVREGIIDVDGGEEDYEVL 150
Query: 72 KV----HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWR 127
K H F K LTASDTSTHGGFSV R+ A +C PPLD +Q P+QEL+A+DLHG EWR
Sbjct: 151 KRSNTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWR 210
Query: 128 FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSS 187
F+HI+RGQPRRHLLTTGWS FV K+LV+GD +FLRG++G+L +GVR ++ + + S
Sbjct: 211 FRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGTAALS 270
Query: 188 VISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYK 245
+Q+M+ + +HA++T ++F + Y P+ S FII K+L+ V+ F +GMR+K
Sbjct: 271 AQYNQNMNHNNFSEVAHAISTHSVFSISYNPKASWSNFIIPAPKFLKVVDYPFCIGMRFK 330
Query: 246 MRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 304
R E ED+ ERR G + G+ D P W SKWR L V+WD+ + RVSPWEIEP
Sbjct: 331 ARVESEDASERRSPGIISGISDLDPIRWPGSKWRCLLVRWDDIVANGHQQRVSPWEIEP- 389
Query: 305 VASATPNLVQPVLAKNKRPRLSMEVPPLDLP 335
+ + N V KR R+ D+P
Sbjct: 390 -SGSISNSGSFVTTGPKRSRIGFSSGKPDIP 419
>gi|2245390|gb|AAB62404.1| auxin response transcription factor 3 [Arabidopsis thaliana]
Length = 608
Score = 288 bits (736), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 149/331 (45%), Positives = 203/331 (61%), Gaps = 15/331 (4%)
Query: 18 LFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTP------DPCPADSPRP 71
++ LP + CR++++ L AE TDEVYAQ++LLPE E D D
Sbjct: 91 IYGLPPHVFCRILDVKLHAETTTDEVYAQVSLLPESEDIERKVREGIIDVDGGEEDYEVL 150
Query: 72 KV----HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWR 127
K H F K LTASDTSTHGGFSV R+ A +C PPLD +Q P+QEL+A+DLHG EWR
Sbjct: 151 KRSNTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWR 210
Query: 128 FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSS 187
F+HI+RGQPRRHLLTTGWS FV K+LV+GD +FLRG++G+L +GVR ++ + + S
Sbjct: 211 FRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGTAALS 270
Query: 188 VISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYK 245
+Q+M+ + +HA++T ++F + Y P+ S FII K+L+ V+ F +GMR+K
Sbjct: 271 AQYNQNMNHNNFSEVAHAISTHSVFSISYNPKASWSNFIIPAPKFLKVVDYPFCIGMRFK 330
Query: 246 MRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 304
R E ED+ ERR G + G+ D P W SKWR L V+WD+ + RVSPWEIEP
Sbjct: 331 ARVESEDASERRSPGIISGISDLDPIRWPGSKWRCLLVRWDDIVANGHQQRVSPWEIEP- 389
Query: 305 VASATPNLVQPVLAKNKRPRLSMEVPPLDLP 335
+ + N V KR R+ D+P
Sbjct: 390 -SGSISNSGSFVTTGPKRSRIGFSSGKPDIP 419
>gi|414584937|tpg|DAA35508.1| TPA: hypothetical protein ZEAMMB73_047841 [Zea mays]
Length = 935
Score = 288 bits (736), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 158/307 (51%), Positives = 210/307 (68%), Gaps = 8/307 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ A+T + N RIP + LPS++LC+V NI L A++ETDE+YAQ+TL P S+ +
Sbjct: 68 EQVAATTKKIPNSRIPNYPSLPSQLLCQVHNITLHADKETDEIYAQMTLQPVHSETD-VF 126
Query: 61 PDPCPADSPRPKVHS--FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
P P + K S F K LTASDTSTHGGFSV R+ A + P LD + P QEL+
Sbjct: 127 PIPTLGAYTKSKHPSEYFCKNLTASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIV 186
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
+DLH W F+HI+R QP+RHLLTTGWS FV +KRL AGD+ +F+R E +L VGVR
Sbjct: 187 RDLHDNMWTFRHIYR-QPKRHLLTTGWSLFVGAKRLKAGDSVLFIRDEKSQLLVGVRRAT 245
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNN 236
RQQ ++ SSV+S+ SMH+GVLA A+HA ++ F VYY PRT S F+I L +Y A
Sbjct: 246 RQQPALSSSVLSTDSMHIGVLAAAAHAASSGGSFTVYYNPRTSPSPFVIPLARYNMATYL 305
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+ +VGMR+ M FE E+S +RR +GT+VG+ D+ P W +SKWR+L+V+WDE RP+R
Sbjct: 306 QPSVGMRFAMMFETEESSKRRCTGTIVGISDYEPMRWPNSKWRNLQVEWDEHGYGERPER 365
Query: 296 VSPWEIE 302
VS W+IE
Sbjct: 366 VSLWDIE 372
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 588
R+ TKVQ G +VGR++D+T Y L + MF ++G+L + W++VY D E D
Sbjct: 832 RTYTKVQKLG-SVGRSIDVTRFRDYHELRSAIACMFGLQGKLEHPGSSDWKLVYVDYEND 890
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++LVGDDPW EF N V+ I I + +V++MS
Sbjct: 891 VLLVGDDPWEEFINCVRCIRILAPSEVQQMS 921
>gi|224118764|ref|XP_002331440.1| predicted protein [Populus trichocarpa]
gi|222873654|gb|EEF10785.1| predicted protein [Populus trichocarpa]
Length = 1113
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 157/311 (50%), Positives = 212/311 (68%), Gaps = 6/311 (1%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPS-QNEPT 59
EQ+ AS +++N +IP + LPSK+LC + N+ L A+ ETDEVY Q+TL P S +
Sbjct: 54 EQVAASLKKDVNAQIPNYPNLPSKLLCLLHNVTLHADPETDEVYVQMTLQPVSSFDKDAL 113
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
S +P+ F K LTASDTSTHGGFSV R+ A + PPLD + P QELVA+
Sbjct: 114 LRSDLALKSNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKTFPPLDFSMQPPAQELVAR 173
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH W F+HI+RGQP+RHLLTTGWS FV+ KRL AGD+ +F+R E +L +G+R R
Sbjct: 174 DLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFMRDEKQQLLLGIRRANR 233
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NN 236
Q +++ SSV+SS SMH+G+LA A+HA A + F VYY PR S+F+I L KY +AV +N
Sbjct: 234 QPTNLSSSVLSSDSMHIGILAAAAHAAANNSPFTVYYNPRASPSEFVIPLAKYYKAVYSN 293
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDR 295
+ ++GMR++M FE E+S RR GT+ G+ D + WK+S+WR+L+V WDE + R +R
Sbjct: 294 QISLGMRFRMMFETEESGTRRHMGTITGISDLDAVRWKNSQWRNLQVGWDESTAGERRNR 353
Query: 296 VSPWEIEPFVA 306
VS WEIEP A
Sbjct: 354 VSIWEIEPVTA 364
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL--HTRTKWEIVYTDDEGD 588
R+ TKV +G AVGR++D+T GYD L +L F I+GQL R W++VYTD E D
Sbjct: 1001 RTYTKVYKRG-AVGRSIDITRYSGYDELKQDLARRFGIEGQLEDQQRIGWKLVYTDHEND 1059
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++LVGDDPW EF N V+ I I S Q+V++MS
Sbjct: 1060 VLLVGDDPWEEFVNCVRCIKILSPQEVQQMS 1090
>gi|242094110|ref|XP_002437545.1| hypothetical protein SORBIDRAFT_10g029130 [Sorghum bicolor]
gi|241915768|gb|EER88912.1| hypothetical protein SORBIDRAFT_10g029130 [Sorghum bicolor]
Length = 1143
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 152/311 (48%), Positives = 211/311 (67%), Gaps = 6/311 (1%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQN-EPT 59
EQ+ AS ++++ +P + LPSK++C + N+ L A+ ETDEVYAQ+TLLP S E
Sbjct: 63 EQVAASMQKDVDGHVPSYPNLPSKLICLLHNVTLHADPETDEVYAQMTLLPVTSYGKEAL 122
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
PRP+ F K LTASDTSTHGGFSV R+ A + PPLD + P QE+ A+
Sbjct: 123 QLSELALKQPRPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIQAR 182
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH W F+HI+RGQP+RHLLTTGWS FV+ KRL AGD+ +F+R E +L +G+R R
Sbjct: 183 DLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVIFVRDERQQLLLGIRRANR 242
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAV-NN 236
Q +++ SSV+SS SMH+G+LA A+HA A + F ++Y PR S +F++ KY +A+ N
Sbjct: 243 QPTNISSSVLSSDSMHIGILAAAAHAAANNSPFTIFYNPRASPTEFVVPFAKYQKALYGN 302
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+ ++GMR++M FE E+ RR+ GT+ G+ D P WK+S+WR+L+V WDE A+ R +R
Sbjct: 303 QISLGMRFRMMFETEELGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESAAGERRNR 362
Query: 296 VSPWEIEPFVA 306
VS WEIEP A
Sbjct: 363 VSIWEIEPVAA 373
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 588
R+ TKV +G AVGR++D++ GYD L L MF ++GQL R + W++VY D E D
Sbjct: 1010 RTFTKVYKRG-AVGRSIDISQFNGYDELKHALARMFSMEGQLEERQRIGWKLVYKDHEDD 1068
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++L+GDDPW EF N VK I I S Q+V++MS
Sbjct: 1069 ILLLGDDPWEEFVNCVKCIRILSPQEVQQMS 1099
>gi|449488115|ref|XP_004157943.1| PREDICTED: auxin response factor 19-like [Cucumis sativus]
Length = 1097
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 157/309 (50%), Positives = 212/309 (68%), Gaps = 6/309 (1%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQNEPT 59
EQ+ AS N+E + IP + LPSK++C + N+ L A+ ETDEVYAQ+TL P + E
Sbjct: 51 EQVAASMNKETD-FIPNYPNLPSKLICMLHNVTLHADPETDEVYAQMTLQPVNKYEKEAL 109
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
R F K LTASDTSTHGGFSV R+ A + PPLD + P QELVA+
Sbjct: 110 LASDIGLKQSRQPAEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDYSMQPPAQELVAR 169
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH W F+HI+RGQP+RHLLTTGWS FV++KRL AGD+ +F+R E +L +G+R R
Sbjct: 170 DLHDNSWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDEKSQLLLGIRRANR 229
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNK 237
QQ ++ SSVISS SMH+G+LA+A+HA A + F ++Y PR S+F+I L KY +A+ +
Sbjct: 230 QQPALSSSVISSDSMHIGILASAAHAAANNSPFTIFYNPRASPSEFVIPLAKYNKAMYTQ 289
Query: 238 FAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRV 296
++GMR++M FE E+S RR+ GT+ G+ D S WK+S+WR+L+V WDE A+ RP+RV
Sbjct: 290 VSLGMRFRMMFETEESGVRRYMGTITGISDMDSVRWKNSQWRNLQVGWDESAAGERPNRV 349
Query: 297 SPWEIEPFV 305
S WE+EP V
Sbjct: 350 SIWEVEPVV 358
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 63/91 (69%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 588
R+ TKVQ +G +VGR +D+T GYD L +L MF I+GQL RT W++VY D E D
Sbjct: 970 RTYTKVQKRG-SVGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTDWKLVYVDHEND 1028
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++LVGDDPW EF + V+ I I SS +V++MS
Sbjct: 1029 ILLVGDDPWDEFVSCVQSIKILSSAEVQQMS 1059
>gi|47496692|dbj|BAD19061.1| auxin response factor 1 [Cucumis sativus]
Length = 1081
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 157/309 (50%), Positives = 212/309 (68%), Gaps = 6/309 (1%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQNEPT 59
EQ+ AS N+E + IP + LPSK++C + N+ L A+ ETDEVYAQ+TL P + E
Sbjct: 51 EQVAASMNKETD-FIPNYPNLPSKLICMLHNVTLHADPETDEVYAQMTLQPVNKYEKEAL 109
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
R F K LTASDTSTHGGFSV R+ A + PPLD + P QELVA+
Sbjct: 110 LASDIGLKQSRQPAEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDYSMQPPAQELVAR 169
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH W F+HI+RGQP+RHLLTTGWS FV++KRL AGD+ +F+R E +L +G+R R
Sbjct: 170 DLHDNSWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDEKSQLLLGIRRANR 229
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNK 237
QQ ++ SSVISS SMH+G+LA+A+HA A + F ++Y PR S+F+I L KY +A+ +
Sbjct: 230 QQPALSSSVISSDSMHIGILASAAHAAANNSPFTIFYNPRASPSEFVIPLAKYNKAMYTQ 289
Query: 238 FAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRV 296
++GMR++M FE E+S RR+ GT+ G+ D S WK+S+WR+L+V WDE A+ RP+RV
Sbjct: 290 VSLGMRFRMMFETEESGVRRYMGTITGISDMDSVRWKNSQWRNLQVGWDESAAGERPNRV 349
Query: 297 SPWEIEPFV 305
S WE+EP V
Sbjct: 350 SIWEVEPVV 358
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 63/91 (69%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 588
R+ TKVQ +G +VGR +D+T GYD L +L MF I+GQL RT W++VY D E D
Sbjct: 970 RTYTKVQKRG-SVGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTDWKLVYVDHEND 1028
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++LVGDDPW EF + V+ I I SS +V++MS
Sbjct: 1029 ILLVGDDPWDEFVSCVQSIKILSSAEVQQMS 1059
>gi|302808971|ref|XP_002986179.1| hypothetical protein SELMODRAFT_182255 [Selaginella moellendorffii]
gi|300146038|gb|EFJ12710.1| hypothetical protein SELMODRAFT_182255 [Selaginella moellendorffii]
Length = 961
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 162/329 (49%), Positives = 215/329 (65%), Gaps = 10/329 (3%)
Query: 2 EQLEASTNQE--LNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEP 58
EQ+ AST Q+ + IP + LP+ ++C + NI L A+ +TDEVYAQ+TL P + EP
Sbjct: 43 EQVVASTTQKDGVEAEIPNYPNLPAHLICHLHNITLHADPDTDEVYAQMTLQPVQNDKEP 102
Query: 59 -TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELV 117
TPD P+ + SF K LTASDTSTHGGFS+ R+ A + PPLD + P QELV
Sbjct: 103 FLTPDL--GIQPKQQTLSFCKTLTASDTSTHGGFSIPRRAAEKVFPPLDFTKQPPAQELV 160
Query: 118 AKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCL 177
AKDLH +W F+HI+RGQPRRHLLTTGWS FV++KRL AGDT +F+R EN L +G+R
Sbjct: 161 AKDLHNQQWTFRHIYRGQPRRHLLTTGWSVFVSAKRLQAGDTVLFIRDENNHLLLGIRRA 220
Query: 178 ARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVN 235
RQQ+++PSS++SS SM +GVLA A+HA T + F ++Y PR S+F++ ++ +A
Sbjct: 221 NRQQANVPSSLLSSDSMLIGVLAAAAHAATTNSRFTIFYNPRASFSEFVVPFCRFSKATY 280
Query: 236 N-KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRP 293
+ + VGMR++M E EDS RR+ GT+ G+ D S W +S WR+LKV WDE + R
Sbjct: 281 HPRVTVGMRFRMELETEDSSTRRYMGTITGIGDLDSVRWPNSLWRTLKVGWDESTAGQRQ 340
Query: 294 DRVSPWEIEPFVASATPNLVQPVLAKNKR 322
RVS WEIEP A P L K R
Sbjct: 341 KRVSLWEIEPLTAPYFPCTSSLFLRKRTR 369
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 62/92 (67%), Gaps = 3/92 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL---HTRTKWEIVYTDDEG 587
R+ TKV + +VGR++D+T L Y+ L ++ MF+++GQL R+ W++V+ D EG
Sbjct: 825 RTFTKVVYKTGSVGRSIDVTRLKNYEELRRDIARMFNLEGQLLMDSCRSSWQLVFVDYEG 884
Query: 588 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
D++LVGDDPW EF V+ I I S +V++++
Sbjct: 885 DVLLVGDDPWEEFVGCVRFIKILSPSEVQQLN 916
>gi|158564106|sp|Q0D9R7.2|ARFS_ORYSJ RecName: Full=Auxin response factor 19; AltName: Full=OsARF7a
Length = 1161
Score = 285 bits (728), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 158/329 (48%), Positives = 214/329 (65%), Gaps = 8/329 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQN-EPT 59
EQ+ AS ++++ +P + LPSK++C + N+ L A+ ETDEVYAQ+TL P S E
Sbjct: 78 EQVAASMQKDVDAHVPSYPNLPSKLICLLHNVTLHADPETDEVYAQMTLQPVTSYGKEAL 137
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
RP+ F K LTASDTSTHGGFSV R+ A + PPLD + P QEL A+
Sbjct: 138 QLSELALKQARPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELQAR 197
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH W F+HI+RGQP+RHLLTTGWS FV+ KRL AGD+ +F+R E +L +G+R R
Sbjct: 198 DLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVIFVRDEKQQLLLGIRRANR 257
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAV-NN 236
Q +++ SSV+SS SMH+G+LA A+HA A + F ++Y PR S +F+I KY +AV N
Sbjct: 258 QPTNISSSVLSSDSMHIGILAAAAHAAANNSPFTIFYNPRASPTEFVIPFAKYQKAVYGN 317
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+ ++GMR++M FE E+ RR+ GT+ G+ D P WK+S+WR+L+V WDE A+ R +R
Sbjct: 318 QISLGMRFRMMFETEELGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESAAGERRNR 377
Query: 296 VSPWEIEPFVASATPNLVQPVLAKNKRPR 324
VS WEIEP A A KRPR
Sbjct: 378 VSIWEIEPVAAPFFICPPPFFGA--KRPR 404
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 588
R+ TKV +G AVGR++D++ GYD L L MF I+GQL R + W++VY D E D
Sbjct: 1027 RTFTKVYKRG-AVGRSIDMSQFSGYDELKHALARMFSIEGQLEERQRIGWKLVYKDHEDD 1085
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++L+GDDPW EF VK I I S Q+V++MS
Sbjct: 1086 ILLLGDDPWEEFVGCVKCIRILSPQEVQQMS 1116
>gi|379323194|gb|AFD01296.1| auxin response factor 3-1 [Brassica rapa subsp. pekinensis]
Length = 605
Score = 285 bits (728), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 150/337 (44%), Positives = 204/337 (60%), Gaps = 16/337 (4%)
Query: 18 LFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTP------DPCPADSPRP 71
++ LP + CR++++ L AE TDEVYAQ++LLPE E D D
Sbjct: 89 IYGLPPHVFCRILDVKLHAETATDEVYAQVSLLPESEDVERKVREGVIDVDGGEEDYEVV 148
Query: 72 KV----HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWR 127
K H F K LTASDTSTHGGFSV R+ A +C PPLD Q P+QEL+A+DLHG EWR
Sbjct: 149 KRTNTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYTQPRPSQELLARDLHGLEWR 208
Query: 128 FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSS 187
F+HI+RGQPRRHLLTTGWS FV K+LV+GD +FLRG++G+L +GVR ++ + + S
Sbjct: 209 FRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGASAFS 268
Query: 188 VISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYK 245
+Q+M+ A HA++T + F +YY P+ S FII K+L+ V+ F +GMR+K
Sbjct: 269 SQYNQNMNHNNFAEVVHAISTNSAFNIYYNPKASWSNFIIPAPKFLKTVDYPFCIGMRFK 328
Query: 246 MRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEP-ASITRPDRVSPWEIEP 303
R E ED+ ERR G + G+ D P W SKWR L V+WD+ A+ R+SPWEIEP
Sbjct: 329 ARVESEDASERRSPGIITGINDLDPIRWPGSKWRCLLVRWDDTDANGHHQQRISPWEIEP 388
Query: 304 FVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASA 340
+ ++ + KR R+ D+P + S
Sbjct: 389 SGSISSSGSF--ITTGPKRSRIGFSSGKPDIPVSGSG 423
>gi|222636179|gb|EEE66311.1| hypothetical protein OsJ_22545 [Oryza sativa Japonica Group]
Length = 1138
Score = 285 bits (728), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 158/329 (48%), Positives = 214/329 (65%), Gaps = 8/329 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQN-EPT 59
EQ+ AS ++++ +P + LPSK++C + N+ L A+ ETDEVYAQ+TL P S E
Sbjct: 55 EQVAASMQKDVDAHVPSYPNLPSKLICLLHNVTLHADPETDEVYAQMTLQPVTSYGKEAL 114
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
RP+ F K LTASDTSTHGGFSV R+ A + PPLD + P QEL A+
Sbjct: 115 QLSELALKQARPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELQAR 174
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH W F+HI+RGQP+RHLLTTGWS FV+ KRL AGD+ +F+R E +L +G+R R
Sbjct: 175 DLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVIFVRDEKQQLLLGIRRANR 234
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAV-NN 236
Q +++ SSV+SS SMH+G+LA A+HA A + F ++Y PR S +F+I KY +AV N
Sbjct: 235 QPTNISSSVLSSDSMHIGILAAAAHAAANNSPFTIFYNPRASPTEFVIPFAKYQKAVYGN 294
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+ ++GMR++M FE E+ RR+ GT+ G+ D P WK+S+WR+L+V WDE A+ R +R
Sbjct: 295 QISLGMRFRMMFETEELGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESAAGERRNR 354
Query: 296 VSPWEIEPFVASATPNLVQPVLAKNKRPR 324
VS WEIEP A A KRPR
Sbjct: 355 VSIWEIEPVAAPFFICPPPFFGA--KRPR 381
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 588
R+ TKV +G AVGR++D++ GYD L L MF I+GQL R + W++VY D E D
Sbjct: 1004 RTFTKVYKRG-AVGRSIDMSQFSGYDELKHALARMFSIEGQLEERQRIGWKLVYKDHEDD 1062
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++L+GDDPW EF VK I I S Q+V++MS
Sbjct: 1063 ILLLGDDPWEEFVGCVKCIRILSPQEVQQMS 1093
>gi|218198843|gb|EEC81270.1| hypothetical protein OsI_24368 [Oryza sativa Indica Group]
Length = 1137
Score = 285 bits (728), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 158/329 (48%), Positives = 214/329 (65%), Gaps = 8/329 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQN-EPT 59
EQ+ AS ++++ +P + LPSK++C + N+ L A+ ETDEVYAQ+TL P S E
Sbjct: 55 EQVAASMQKDVDAHVPSYPNLPSKLICLLHNVTLHADPETDEVYAQMTLQPVTSYGKEAL 114
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
RP+ F K LTASDTSTHGGFSV R+ A + PPLD + P QEL A+
Sbjct: 115 QLSELALKQARPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELQAR 174
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH W F+HI+RGQP+RHLLTTGWS FV+ KRL AGD+ +F+R E +L +G+R R
Sbjct: 175 DLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVIFVRDEKQQLLLGIRRANR 234
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAV-NN 236
Q +++ SSV+SS SMH+G+LA A+HA A + F ++Y PR S +F+I KY +AV N
Sbjct: 235 QPTNISSSVLSSDSMHIGILAAAAHAAANNSPFTIFYNPRASPTEFVIPFAKYQKAVYGN 294
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+ ++GMR++M FE E+ RR+ GT+ G+ D P WK+S+WR+L+V WDE A+ R +R
Sbjct: 295 QISLGMRFRMMFETEELGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESAAGERRNR 354
Query: 296 VSPWEIEPFVASATPNLVQPVLAKNKRPR 324
VS WEIEP A A KRPR
Sbjct: 355 VSIWEIEPVAAPFFICPPPFFGA--KRPR 381
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 588
R+ TKV +G AVGR++D++ GYD L L MF I+GQL R + W++VY D E D
Sbjct: 1003 RTFTKVYKRG-AVGRSIDMSQFSGYDELKHALARMFSIEGQLEERQRIGWKLVYKDHEDD 1061
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++L+GDDPW EF VK I I S Q+V++MS
Sbjct: 1062 ILLLGDDPWEEFVGCVKCIRILSPQEVQQMS 1092
>gi|297606458|ref|NP_001058492.2| Os06g0702600 [Oryza sativa Japonica Group]
gi|53791908|dbj|BAD54030.1| putative auxin response factor 7a [Oryza sativa Japonica Group]
gi|53792756|dbj|BAD53792.1| putative auxin response factor 7a [Oryza sativa Japonica Group]
gi|255677372|dbj|BAF20406.2| Os06g0702600 [Oryza sativa Japonica Group]
Length = 991
Score = 285 bits (728), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 158/329 (48%), Positives = 214/329 (65%), Gaps = 8/329 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQN-EPT 59
EQ+ AS ++++ +P + LPSK++C + N+ L A+ ETDEVYAQ+TL P S E
Sbjct: 78 EQVAASMQKDVDAHVPSYPNLPSKLICLLHNVTLHADPETDEVYAQMTLQPVTSYGKEAL 137
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
RP+ F K LTASDTSTHGGFSV R+ A + PPLD + P QEL A+
Sbjct: 138 QLSELALKQARPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELQAR 197
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH W F+HI+RGQP+RHLLTTGWS FV+ KRL AGD+ +F+R E +L +G+R R
Sbjct: 198 DLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVIFVRDEKQQLLLGIRRANR 257
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAV-NN 236
Q +++ SSV+SS SMH+G+LA A+HA A + F ++Y PR S +F+I KY +AV N
Sbjct: 258 QPTNISSSVLSSDSMHIGILAAAAHAAANNSPFTIFYNPRASPTEFVIPFAKYQKAVYGN 317
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+ ++GMR++M FE E+ RR+ GT+ G+ D P WK+S+WR+L+V WDE A+ R +R
Sbjct: 318 QISLGMRFRMMFETEELGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESAAGERRNR 377
Query: 296 VSPWEIEPFVASATPNLVQPVLAKNKRPR 324
VS WEIEP A A KRPR
Sbjct: 378 VSIWEIEPVAAPFFICPPPFFGA--KRPR 404
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 62/95 (65%), Gaps = 3/95 (3%)
Query: 527 LTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTD 584
L R+ TKV +G AVGR++D++ GYD L L MF I+GQL R + W++VY D
Sbjct: 853 LKRMRTFTKVYKRG-AVGRSIDMSQFSGYDELKHALARMFSIEGQLEERQRIGWKLVYKD 911
Query: 585 DEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
E D++L+GDDPW EF VK I I S Q+V++MS
Sbjct: 912 HEDDILLLGDDPWEEFVGCVKCIRILSPQEVQQMS 946
>gi|19352045|dbj|BAB85916.1| auxin response factor 7a [Oryza sativa]
Length = 1123
Score = 285 bits (728), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 158/329 (48%), Positives = 214/329 (65%), Gaps = 8/329 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQN-EPT 59
EQ+ AS ++++ +P + LPSK++C + N+ L A+ ETDEVYAQ+TL P S E
Sbjct: 40 EQVAASMQKDVDAHVPSYPNLPSKLICLLHNVTLHADPETDEVYAQMTLQPVTSYGKEAL 99
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
RP+ F K LTASDTSTHGGFSV R+ A + PPLD + P QEL A+
Sbjct: 100 QLSELALKQARPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELQAR 159
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH W F+HI+RGQP+RHLLTTGWS FV+ KRL AGD+ +F+R E +L +G+R R
Sbjct: 160 DLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVIFVRDEKQQLLLGIRRANR 219
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAV-NN 236
Q +++ SSV+SS SMH+G+LA A+HA A + F ++Y PR S +F+I KY +AV N
Sbjct: 220 QPTNISSSVLSSDSMHIGILAAAAHAAANNSPFTIFYNPRASPTEFVIPFAKYQKAVYGN 279
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+ ++GMR++M FE E+ RR+ GT+ G+ D P WK+S+WR+L+V WDE A+ R +R
Sbjct: 280 QISLGMRFRMMFETEELGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESAAGERRNR 339
Query: 296 VSPWEIEPFVASATPNLVQPVLAKNKRPR 324
VS WEIEP A A KRPR
Sbjct: 340 VSIWEIEPVAAPFFICPPPFFGA--KRPR 366
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 588
R+ TKV +G AVGR++D++ GYD L L MF I+GQL R + W++VY D E D
Sbjct: 989 RTFTKVYKRG-AVGRSIDMSQFSGYDELKHALARMFSIEGQLEERQRIGWKLVYKDHEDD 1047
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++L+GDDPW EF VK I I S Q+V++MS
Sbjct: 1048 ILLLGDDPWEEFVGCVKCIRILSPQEVQQMS 1078
>gi|326530666|dbj|BAK01131.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 955
Score = 285 bits (728), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 165/353 (46%), Positives = 230/353 (65%), Gaps = 19/353 (5%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE--P 58
EQ+ A+T + N RIP + LPS++LC+V NI + A+++TDEVYAQ+TL P S+ + P
Sbjct: 72 EQVAATTKKTPNSRIPNYPSLPSQLLCQVHNITMHADKDTDEVYAQMTLQPVNSETDVFP 131
Query: 59 TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
A S P + F K LTASDTSTHGGFSV R+ A + P LD + P QEL+
Sbjct: 132 IQSLGSYAKSKHPAEY-FCKNLTASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIV 190
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
+DLH W F+HI+RGQP+RHLLTTGWS FV +KRL AGD+ +F+R E +L VGVR
Sbjct: 191 RDLHDNMWTFRHIYRGQPKRHLLTTGWSLFVGAKRLKAGDSVLFIRDEKSQLLVGVRRAT 250
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNN 236
QQ+++ SSV+S+ SMH+GVLA A+HA ++ + F +YY PRT S F++ + +Y +A+
Sbjct: 251 NQQTALSSSVLSTDSMHIGVLAAAAHAASSGSSFTIYYNPRTSPSPFVVPMTRYNKAIYI 310
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWD--EPASITRP 293
+ +VGMR M E E+S +RR +GT+VGV D P W +SKWR+L+V+WD E RP
Sbjct: 311 QQSVGMRIAMMSETEESGKRRHTGTIVGVSDSDPMRWPNSKWRNLQVEWDEHEHGYGERP 370
Query: 294 DRVSPWEIEPFVASATP--NLVQPVLAKNKRPRL--SMEVPPLDLPSAASAPW 342
+RVS W+IE TP +V P + N + + VP L++ SA +P+
Sbjct: 371 ERVSIWDIE------TPENTIVLPSASLNSKRQCLPGYGVPGLEVASANMSPF 417
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 588
R+ TKVQ G +VGR++D+T Y L + MF ++G+L + W++VY D E D
Sbjct: 851 RTYTKVQKLG-SVGRSIDVTRYRDYRELRSAIASMFGLQGKLEHPASSDWKLVYVDYEND 909
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++LVGDDPW EF N V+ I I S +V++MS
Sbjct: 910 VLLVGDDPWEEFINCVRCIRILSPSEVQQMS 940
>gi|302806481|ref|XP_002984990.1| hypothetical protein SELMODRAFT_181404 [Selaginella moellendorffii]
gi|300147200|gb|EFJ13865.1| hypothetical protein SELMODRAFT_181404 [Selaginella moellendorffii]
Length = 958
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 162/329 (49%), Positives = 215/329 (65%), Gaps = 10/329 (3%)
Query: 2 EQLEASTNQE--LNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEP 58
EQ+ AST Q+ + IP + LP+ ++C + NI L A+ +TDEVYAQ+TL P + EP
Sbjct: 43 EQVVASTTQKDGVEAEIPNYPSLPAHLICHLHNITLHADPDTDEVYAQMTLQPVQNDKEP 102
Query: 59 -TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELV 117
TPD P+ + SF K LTASDTSTHGGFS+ R+ A + PPLD + P QELV
Sbjct: 103 FLTPDL--GIQPKQQTLSFCKTLTASDTSTHGGFSIPRRAAEKVFPPLDFTKQPPAQELV 160
Query: 118 AKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCL 177
AKDLH +W F+HI+RGQPRRHLLTTGWS FV++KRL AGDT +F+R EN L +G+R
Sbjct: 161 AKDLHNQQWTFRHIYRGQPRRHLLTTGWSVFVSAKRLQAGDTVLFIRDENNHLLLGIRRA 220
Query: 178 ARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVN 235
RQQ+++PSS++SS SM +GVLA A+HA T + F ++Y PR S+F++ ++ +A
Sbjct: 221 NRQQANVPSSLLSSDSMLIGVLAAAAHAATTNSRFTIFYNPRASFSEFVVPFCRFSKATY 280
Query: 236 N-KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRP 293
+ + VGMR++M E EDS RR+ GT+ G+ D S W +S WR+LKV WDE + R
Sbjct: 281 HPRVTVGMRFRMELETEDSSTRRYMGTITGIGDLDSVRWPNSLWRTLKVGWDESTAGQRQ 340
Query: 294 DRVSPWEIEPFVASATPNLVQPVLAKNKR 322
RVS WEIEP A P L K R
Sbjct: 341 RRVSLWEIEPLTAPYFPCTSSLFLRKRTR 369
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 62/92 (67%), Gaps = 3/92 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL---HTRTKWEIVYTDDEG 587
R+ TKV + +VGR++D+T L Y+ L ++ MF+++GQL R+ W++V+ D EG
Sbjct: 822 RTFTKVVYKTGSVGRSIDVTRLKNYEELRRDIARMFNLEGQLLMDSCRSSWQLVFVDYEG 881
Query: 588 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
D++LVGDDPW EF V+ I I S +V++++
Sbjct: 882 DVLLVGDDPWEEFVGCVRFIKILSPSEVQQLN 913
>gi|350537897|ref|NP_001234316.1| auxin response factor 3 [Solanum lycopersicum]
gi|85069277|gb|ABC69710.1| auxin response factor 3 [Solanum lycopersicum]
Length = 747
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 146/328 (44%), Positives = 205/328 (62%), Gaps = 16/328 (4%)
Query: 21 LPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKV------- 73
LP + CRVV++ L A+ TDEVYAQ++L+P+ Q E D +
Sbjct: 95 LPPHVFCRVVDVKLQADAATDEVYAQVSLVPDNQQIEQKWKDGDIDADIEEEEIEGAGKS 154
Query: 74 ---HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKH 130
H F K LTASDTSTHGGFSV R+ A +C PLD Q P+QELVAKDLHG EW+F+H
Sbjct: 155 ITPHMFCKTLTASDTSTHGGFSVPRRAAEDCFAPLDYRQQRPSQELVAKDLHGIEWKFRH 214
Query: 131 IFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVIS 190
I+RGQPRRHLLTTGWS FV K+LV+GD +FLR +GEL +GVR A+ ++
Sbjct: 215 IYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRTGDGELRLGVRRAAQAKTCSSYLAPC 274
Query: 191 SQSMHLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRF 248
S+ +++ + A + ++++ F + Y PR +S FI+ +K+ + + + F+ GMR+KMR
Sbjct: 275 SKPLNVSGIVDAVNVISSRNAFNICYNPRDSSSDFIVPYHKFSKTLAHPFSAGMRFKMRV 334
Query: 249 EGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVAS 307
E ED+ E+RF+G VVGV + P W SKWR L V+WD+ ++R +RVSPWEIEP ++
Sbjct: 335 ETEDAAEQRFTGLVVGVSNVDPVRWPGSKWRCLLVRWDD-LDVSRHNRVSPWEIEPSGSA 393
Query: 308 ATPNLVQPVLAKNKRPRLSMEVPPLDLP 335
P+ + V+ KR R+ + D P
Sbjct: 394 PVPSSL--VMPSAKRTRVGFPISKADFP 419
>gi|449470376|ref|XP_004152893.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101205542 [Cucumis sativus]
Length = 1107
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 156/329 (47%), Positives = 219/329 (66%), Gaps = 8/329 (2%)
Query: 2 EQLEASTNQELNQRIPLFRLPSKI-LCRVVNIHLMAEQETDEVYAQITLLPEPS-QNEPT 59
EQ+ AS ++++ ++ ++ ++ +++L A+ ETDEVYAQ+TLLP PS +
Sbjct: 58 EQVAASLRKDVDGQVTIYLYHYYFAFLKLCSLYLXADPETDEVYAQMTLLPVPSFDKDAL 117
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
S +P+ F K LTASDTSTHGGFSV R+ A + PPLD + P QELVAK
Sbjct: 118 LRSDLALKSNKPQPEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVAK 177
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH W F+HI+RGQP+RHLLTTGWS FV+ KRL+AGD+ +F+R E +L +G+R R
Sbjct: 178 DLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLLAGDSVLFIRDEKQQLLLGIRRANR 237
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVN-N 236
Q +++ SSV+SS SMH+G+LA A+HA A + F V+Y PR S+F+I L KY +AV+ N
Sbjct: 238 QPTNLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVIPLAKYYKAVSAN 297
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+ ++GMR++M FE E+S RR+ GT+ G+ D P WK S+WR+L+V WDE R +R
Sbjct: 298 QISLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKGSQWRNLQVGWDESTGGERRNR 357
Query: 296 VSPWEIEPFVASATPNLVQPVLAKNKRPR 324
VS WEIEP +A + P ++KRPR
Sbjct: 358 VSVWEIEPVIAPFF--ICPPPFLRSKRPR 384
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 588
R+ TKV +G AVGR++D+ GYD L +L F I+GQL R K W++VY D E D
Sbjct: 995 RTYTKVYKRG-AVGRSIDIARYSGYDELKQDLARRFGIEGQLEDRQKIGWKLVYVDHEND 1053
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++LVGDDPW +F N V+ I I S Q+V++MS
Sbjct: 1054 VLLVGDDPWDDFVNCVRSIKILSPQEVQQMS 1084
>gi|224069204|ref|XP_002326300.1| predicted protein [Populus trichocarpa]
gi|222833493|gb|EEE71970.1| predicted protein [Populus trichocarpa]
Length = 1057
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 155/309 (50%), Positives = 208/309 (67%), Gaps = 6/309 (1%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQNEPT 59
EQ+ AS +E + IP + LPSK++C + N+ L A+ ETDEVYAQ+TL P + E
Sbjct: 51 EQVAASMQKETD-FIPSYPNLPSKLICMLHNVTLHADVETDEVYAQMTLQPVSKYEKEAL 109
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
R F K LTASDTSTHGGFSV R+ A + PPLD + P QELVA+
Sbjct: 110 LASDMGLKQNRQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVAR 169
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH W F+HI+RGQP+RHLLTTGWS FV++KRL AGD+ +F+R E +L +G+R R
Sbjct: 170 DLHDNTWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDEKSQLLLGIRRANR 229
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNK 237
QQ ++ SSVISS SMH+G+LA A+HA A + F ++Y PR S+F+I +KY +A+ +
Sbjct: 230 QQPALSSSVISSDSMHIGILAAAAHAAANNSPFTIFYNPRASPSEFVIPFSKYNKALYTQ 289
Query: 238 FAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRV 296
++GMR++M FE E+S RR+ GT+ G+ D P WK+S+WR+L+V WDE + RP RV
Sbjct: 290 VSLGMRFRMMFETEESGVRRYMGTITGISDMDPVRWKNSQWRNLQVGWDESTAGERPSRV 349
Query: 297 SPWEIEPFV 305
S WEIEP V
Sbjct: 350 SIWEIEPVV 358
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 63/91 (69%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 588
R+ TKVQ +G +VGR++D+T GY+ L +L MF I+GQL + W++VY D E D
Sbjct: 930 RTYTKVQKRG-SVGRSIDVTRYKGYNELRHDLARMFGIEGQLEDPQSSDWKLVYVDHEND 988
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++LVGDDPW EF + V+ I I SS +V++MS
Sbjct: 989 ILLVGDDPWEEFVSCVQSIKILSSAEVQQMS 1019
>gi|357123645|ref|XP_003563519.1| PREDICTED: auxin response factor 19-like [Brachypodium distachyon]
Length = 1149
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 153/311 (49%), Positives = 209/311 (67%), Gaps = 6/311 (1%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQN-EPT 59
EQ+ AS ++++ +P + LPSK++C + NI L A+ ETDEVYAQ+TL P S E
Sbjct: 73 EQVAASMQKDVDAHVPNYPNLPSKLICLLHNITLHADLETDEVYAQMTLQPVTSYGKEAL 132
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
RP+ F K LTASDTSTHGGFSV R+ A + PPLD + P QE+ A+
Sbjct: 133 QLSELALKQSRPQNEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIQAR 192
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH W F+HI+RGQP+RHLLTTGWS FV+ KRL AGD+ +F+R E +L +G+R R
Sbjct: 193 DLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVIFVRDERQQLLLGIRRANR 252
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAV-NN 236
Q +++ SSV+SS SMH+G+LA A+HA A + F ++Y PR S +F+I KY +AV N
Sbjct: 253 QPTNISSSVLSSDSMHIGILAAAAHADANNSPFTIFYNPRASPTEFVIPFAKYQKAVYGN 312
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+ ++GMR++M FE E+ RR+ GT+ G+ D P WK+S+WR+L+V WDE A+ R +R
Sbjct: 313 QLSLGMRFRMMFETEELGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESAAGERRNR 372
Query: 296 VSPWEIEPFVA 306
VS WEIEP A
Sbjct: 373 VSIWEIEPVAA 383
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 588
R+ TKV +G AVGR++D++ GYD L L MF I+GQL R + W++VY D E D
Sbjct: 1015 RTFTKVYKRG-AVGRSIDISQYAGYDELKHALARMFSIEGQLEERQRIGWKLVYRDHEDD 1073
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++L+GDDPW EF N VK I I S Q+V++MS
Sbjct: 1074 ILLLGDDPWEEFVNCVKYIRILSPQEVQQMS 1104
>gi|255550359|ref|XP_002516230.1| Auxin response factor, putative [Ricinus communis]
gi|223544716|gb|EEF46232.1| Auxin response factor, putative [Ricinus communis]
Length = 1119
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 154/309 (49%), Positives = 206/309 (66%), Gaps = 6/309 (1%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQNEPT 59
EQ+ AS +E + IP + LPSK++C + N+ L A+ ETDEVYAQ+TL P E
Sbjct: 51 EQVAASMQKETD-FIPSYPNLPSKLICMLHNVTLHADAETDEVYAQMTLQPVNKYDKEAL 109
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
R F K LTASDTSTHGGFSV R+ A + PPLD + P QELVA+
Sbjct: 110 LASDMGLKQSRQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVAR 169
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH W F+HI+RGQP+RHLLTTGWS FV++KRL AGD+ +F+R E +L +G+R R
Sbjct: 170 DLHDNTWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDEKSQLLLGIRRANR 229
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNK 237
QQ ++ SSVISS SMH+G+LA A+HA A + F ++Y PR S+F+I +KY +A+ +
Sbjct: 230 QQPALSSSVISSDSMHIGILAAAAHAAANNSPFTIFYNPRASPSEFVIPFSKYNKAMYTQ 289
Query: 238 FAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRV 296
++GMR++M FE E+S RR+ GT+ G+ D P WK S+WR+L+V WDE + RP RV
Sbjct: 290 VSLGMRFRMMFETEESGVRRYMGTITGISDLDPVRWKTSQWRNLQVGWDESTAGERPSRV 349
Query: 297 SPWEIEPFV 305
S WE+EP V
Sbjct: 350 SIWEVEPVV 358
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 63/91 (69%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 588
R+ TKVQ +G +VGR++D+T GYD L +L MF I+GQL + W++VY D E D
Sbjct: 992 RTYTKVQKRG-SVGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQSSDWKLVYVDHEND 1050
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++LVGDDPW EF + V+ I I SS +V++MS
Sbjct: 1051 ILLVGDDPWEEFVSCVQSIKILSSAEVQQMS 1081
>gi|242063990|ref|XP_002453284.1| hypothetical protein SORBIDRAFT_04g003240 [Sorghum bicolor]
gi|241933115|gb|EES06260.1| hypothetical protein SORBIDRAFT_04g003240 [Sorghum bicolor]
Length = 1143
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 158/331 (47%), Positives = 220/331 (66%), Gaps = 12/331 (3%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQN-EPT 59
EQ+ AS ++++ +P + LPSK++C + ++ L A+ +TDEVYAQ+TL P + E
Sbjct: 68 EQVAASMQKDIDAHVPSYPNLPSKLICLLHSVTLHADPDTDEVYAQMTLQPVNTYGKEAL 127
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
RP++ F K LTASDTSTHGGFSV R+ A + LPPLD + P QEL A+
Sbjct: 128 QLSELALKHARPQMEFFCKTLTASDTSTHGGFSVPRRAAEKILPPLDFSMQPPAQELQAR 187
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
D+H W F+HIFRGQP+RHLLTTGWS FV KRL AGD+ +F+R E +L +G+R +R
Sbjct: 188 DIHDNVWTFRHIFRGQPKRHLLTTGWSLFVGGKRLFAGDSVIFVRDERQQLLLGIRRASR 247
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAV-NN 236
Q +++ SSV+SS SMH+GVLA A+HA A + F ++Y PR S +F+I KY +A+ +N
Sbjct: 248 QPTNISSSVLSSDSMHIGVLAAAAHAAANNSPFTIFYNPRASPTEFVIPFAKYQKALYSN 307
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+ ++GMR++M FE E+ RR+ GT+ G+ D P WK+S+WR+L+V WDE A+ R +R
Sbjct: 308 QISLGMRFRMMFETEELGMRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESAAGERRNR 367
Query: 296 VSPWEIEPFVASATPNLV--QPVLAKNKRPR 324
VS WEIEP A P + QP KRPR
Sbjct: 368 VSMWEIEPIAA---PFFICPQPFFGV-KRPR 394
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 588
R+ TKV +G AVGR++D+ GY+ L L MF I+GQL R + W++VY D E D
Sbjct: 1010 RTFTKVYKRG-AVGRSIDIGRFSGYEELKHALARMFGIEGQLEDRQRIGWKLVYKDHEDD 1068
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++L+GDDPW EF N VK I I S Q+V++MS
Sbjct: 1069 ILLLGDDPWEEFVNCVKCIRILSPQEVQQMS 1099
>gi|291196861|emb|CAX63106.1| ETTIN protein [Cabomba aquatica]
Length = 827
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 151/347 (43%), Positives = 213/347 (61%), Gaps = 19/347 (5%)
Query: 4 LEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEP---------- 53
LE QE + R + LP +I+CRVV++ L AE DE+YAQ++LL E
Sbjct: 66 LEQHQVQESHTRT--YDLPPQIICRVVDVKLQAEVSNDELYAQVSLLAEDEVGFLDESVV 123
Query: 54 -SQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTP 112
S N R H F K LTASDTSTHGGFSV R+ A +C PPLD +Q P
Sbjct: 124 RSLNGGEEVSEENQGIRRTIPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRP 183
Query: 113 TQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHV 172
+QEL AKDL+G+ WRF+HI+RGQPRRHLLTTGWS+F K+L GD +FLR ++GEL +
Sbjct: 184 SQELTAKDLYGFIWRFRHIYRGQPRRHLLTTGWSSFANKKKLKPGDAVLFLRVDDGELRL 243
Query: 173 GVRCLARQ-QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNK 229
G+R RQ Q +P + + Q + +L+ + A++ + +F +YY PR S +F++ K
Sbjct: 244 GIRRATRQSQCCVPYTGLLCQLSRVNMLSMVADALSVKKLFHIYYNPRASPAEFMVPYWK 303
Query: 230 YLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPA 288
YL + ++ F++GMR K+R E ED+ E+R++G + GV D P W +SKWR L V+WD+ A
Sbjct: 304 YLRSCSHPFSMGMRLKIRVETEDAVEKRYTGHITGVGDVDPIRWPNSKWRCLVVRWDDNA 363
Query: 289 SITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLP 335
DRVSPWEIE +S + P+ + +KRP+++ D+P
Sbjct: 364 DTCLHDRVSPWEIEQ--SSLVSSFSFPLKSTSKRPKMNFPSIITDIP 408
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 90/172 (52%), Gaps = 17/172 (9%)
Query: 447 KTETGTSCRLFGIELINHATSS--APSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKE 504
+T + +CRLFG L S P ++ VS L +++ +D
Sbjct: 649 ETYSKGNCRLFGFSLKTDEASKLEEPIQRALVSPLDIFHSGMTSHQTFPPTD-------- 700
Query: 505 FKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEE 564
K + +SP S Q S R TKV Q VGRA+DLT L GYD LI ELE
Sbjct: 701 ---PKISGIHLSPNSGGSLQP---STRRCTKVYKQESLVGRAVDLTKLTGYDDLIFELER 754
Query: 565 MFDIKGQLHT-RTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDV 615
+ D++G L R W++VYTD+ DMMLVGD+PW EFC++V +I I + ++V
Sbjct: 755 LLDMEGLLRDPRKGWQVVYTDNVSDMMLVGDEPWQEFCDIVSKIHIFTREEV 806
>gi|158513349|sp|A3B9A0.1|ARFP_ORYSJ RecName: Full=Auxin response factor 16
gi|125596359|gb|EAZ36139.1| hypothetical protein OsJ_20449 [Oryza sativa Japonica Group]
Length = 1055
Score = 282 bits (721), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 155/319 (48%), Positives = 213/319 (66%), Gaps = 9/319 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQNEPT 59
EQ+ AS ++EL+ IP + LPSK++C+++++ L A+ ETDEVYAQ+TL P +
Sbjct: 52 EQVAASMHKELD-NIPGYPSLPSKLICKLLSLTLHADSETDEVYAQMTLQPVNKYDRDAM 110
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
+ F K LTASDTSTHGGFSV R+ A + PPLD P QEL+AK
Sbjct: 111 LASELGLKQNKQPAEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFTMQPPAQELIAK 170
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH W+F+HI+RGQP+RHLLTTGWS FV++KRL+AGD+ +F+R E +L +G+R R
Sbjct: 171 DLHDISWKFRHIYRGQPKRHLLTTGWSVFVSTKRLLAGDSVLFIRDEKSQLLLGIRRATR 230
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNK 237
Q ++ SSV+SS SMH+G+LA A+HA A + F ++Y PR S+F+I L KY +A+ +
Sbjct: 231 PQPALSSSVLSSDSMHIGILAAAAHAAANSSPFTIFYNPRASPSEFVIPLAKYNKALYTQ 290
Query: 238 FAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRV 296
++GMR++M FE EDS RR+ GT+ G+ D P WK+S WR+L+V WDE + R RV
Sbjct: 291 VSLGMRFRMLFETEDSGVRRYMGTITGIGDLDPVRWKNSHWRNLQVGWDESTASERRTRV 350
Query: 297 SPWEIEPFVASATPNLVQP 315
S WEIEP ATP + P
Sbjct: 351 SIWEIEPV---ATPFYICP 366
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 588
R+ TKVQ +G +VGR++D+T YD L +L MF I+GQL R W++VY D E D
Sbjct: 940 RTFTKVQKRG-SVGRSIDITRYRDYDELRHDLACMFGIQGQLEDPYRMDWKLVYVDHEND 998
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++LVGDDPW EF VK I I S+ +V++MS
Sbjct: 999 ILLVGDDPWEEFVGCVKSIKILSAAEVQQMS 1029
>gi|413919844|gb|AFW59776.1| hypothetical protein ZEAMMB73_806966 [Zea mays]
Length = 958
Score = 282 bits (721), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 154/320 (48%), Positives = 208/320 (65%), Gaps = 20/320 (6%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ A+T + N RIP + LP ++LC+V NI L A++ETDE+Y Q+TL P S+ +
Sbjct: 67 EQVAATTKKIPNSRIPNYPSLPPQLLCQVHNITLHADKETDEIYCQMTLQPLHSETD-VF 125
Query: 61 PDPCPADSPRPK--VHSFSKVLTASDTSTHGGFSVLRKHATECLP-------------PL 105
P P + K F K LTASDTSTHGGFSV R+ A + P P
Sbjct: 126 PIPTLGAYTKSKHPTEYFCKNLTASDTSTHGGFSVPRRAAEKLFPQLVRASAQTRVFNPQ 185
Query: 106 DMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 165
D + P QEL+ +DLH W F+HI+RGQP+RHLLTTGWS FV +KRL AGD+ +F+R
Sbjct: 186 DYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLLTTGWSLFVGAKRLKAGDSVLFIRD 245
Query: 166 ENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQF 223
E +L VGVR RQQ ++ SSV+S+ SMH+GVLA A+HA ++ F +YY PRT S F
Sbjct: 246 EKSQLLVGVRRATRQQPALSSSVLSTDSMHIGVLAAAAHAASSGGSFTIYYNPRTSPSPF 305
Query: 224 IISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKV 282
+I L +Y +A + +VGMR+ M FE E+S +RR +G +VG+ D+ P W +SKWR+L+V
Sbjct: 306 VIPLARYNKATYLQPSVGMRFAMMFETEESSKRRCTGAIVGISDYDPMRWPNSKWRNLQV 365
Query: 283 QWDEPASITRPDRVSPWEIE 302
+WDE RP+RVS W+IE
Sbjct: 366 EWDEHGYGERPERVSIWDIE 385
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 57/91 (62%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 588
R+ TKVQ G +VGR +D+T Y L + MF ++G+L + W++VY D E D
Sbjct: 855 RTYTKVQKLG-SVGRCIDVTRFRDYHELRSAIACMFGLQGKLEHPGSSDWKLVYVDYEND 913
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++LVGDDPW EF N V+ I I S +V++MS
Sbjct: 914 VLLVGDDPWEEFINCVRCIRILSPSEVQQMS 944
>gi|357479369|ref|XP_003609970.1| Auxin response factor [Medicago truncatula]
gi|355511025|gb|AES92167.1| Auxin response factor [Medicago truncatula]
Length = 1120
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 158/319 (49%), Positives = 210/319 (65%), Gaps = 9/319 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQNEPT 59
EQ+ AS Q+ IP + LPSK++C + N+ L A+ ETDEVYAQ+TL P +
Sbjct: 51 EQVAASM-QKQTDFIPSYPNLPSKLICMLHNVALHADPETDEVYAQMTLQPVNKYDKDAI 109
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
R F K LTASDTSTHGGFSV R+ A + PPLD + P QELVAK
Sbjct: 110 LASDFGLKQNRQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVAK 169
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH W F+HI+RGQP+RHLLTTGWS F+++KRL AGD+ +F+R E +L +G+R R
Sbjct: 170 DLHDNTWAFRHIYRGQPKRHLLTTGWSVFISTKRLFAGDSVLFIRDEKQQLLLGLRRANR 229
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNK 237
QQ ++ SSVISS SMH+G+LA A+HA A + F +YY PR S+F++ L KY +A+ +
Sbjct: 230 QQPALSSSVISSDSMHIGILAAAAHAAANNSPFTIYYNPRASPSEFVVPLAKYNKAMYTQ 289
Query: 238 FAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRV 296
++GMR++M FE E+S RR+ GTV G+ D P WK+S+WR+L+V WDE + RP RV
Sbjct: 290 VSLGMRFRMMFETEESGVRRYMGTVTGISDLDPVRWKNSQWRNLQVGWDESTAGERPSRV 349
Query: 297 SPWEIEPFVASATPNLVQP 315
S W+IEP V TP + P
Sbjct: 350 SIWDIEPVV---TPFYICP 365
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 63/91 (69%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 588
R+ TKVQ +G +VGR +D+T GYD L +L MF I+GQL RT W++VY D E D
Sbjct: 993 RTYTKVQKRG-SVGRCIDVTRYKGYDELRYDLARMFGIEGQLEDPQRTDWKLVYVDHEND 1051
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++LVGDDPW EF + V+ I I SS +V++MS
Sbjct: 1052 ILLVGDDPWEEFVSCVQSIKILSSAEVQQMS 1082
>gi|326498543|dbj|BAJ98699.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1176
Score = 281 bits (719), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 152/311 (48%), Positives = 209/311 (67%), Gaps = 6/311 (1%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQN-EPT 59
EQ+ AS ++++ +P + LPSK++C + NI L A+ ETDEVYA++TL P S E
Sbjct: 70 EQVAASMQKDVDAHVPNYPNLPSKLICLLHNITLHADLETDEVYARMTLQPVTSYGKEAL 129
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
RP+ F K LTASDTSTHGGFSV R+ A + PPLD + P QE+ A+
Sbjct: 130 QLSELALKQARPQNEFFCKTLTASDTSTHGGFSVPRRSAEKIFPPLDFSMQPPAQEIQAR 189
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH W F+HI+RGQP+RHLLTTGWS FV+ KRL AGD+ +F+R E +L +G+R R
Sbjct: 190 DLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVIFVRDERQQLLLGIRRANR 249
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAV-NN 236
Q +++ SSV+SS SMH+G+LA A+HA A + F ++Y PR S +F+I KY +AV N
Sbjct: 250 QPTNISSSVLSSDSMHIGILAAAAHAAANNSPFTIFYNPRASPTEFVIPFAKYQKAVYGN 309
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+ ++GMR++M FE E+ RR+ GT+ G+ D P WK+S+WR+L+V WDE A+ R +R
Sbjct: 310 QLSLGMRFRMMFETEELGTRRYMGTITGINDLDPVRWKNSQWRNLQVGWDESAAGERRNR 369
Query: 296 VSPWEIEPFVA 306
VS WEIEP A
Sbjct: 370 VSIWEIEPVAA 380
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 588
R+ TKV +G AVGR++D++ GY+ L L MF I+GQL R + W++VY D E D
Sbjct: 1042 RTFTKVYKRG-AVGRSIDISQYAGYEELKQALARMFSIEGQLEERQRIGWKLVYRDHEDD 1100
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++L+GDDPW EF N VK I I S Q+V++MS
Sbjct: 1101 ILLLGDDPWEEFVNCVKCIRILSPQEVQQMS 1131
>gi|356530459|ref|XP_003533798.1| PREDICTED: uncharacterized protein LOC100804628 [Glycine max]
Length = 1125
Score = 281 bits (719), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 153/309 (49%), Positives = 208/309 (67%), Gaps = 6/309 (1%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQNEPT 59
EQ+ AS +E + IP + LPSK++C + N+ L A+ ETDEVYAQ+TL P E
Sbjct: 51 EQVAASMQKEAD-FIPSYPNLPSKLICMLHNVALHADPETDEVYAQMTLQPVNKYDKEAL 109
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
+ F K LTASDTSTHGGFSV R+ A + PPLD + P QE+VAK
Sbjct: 110 LASDMGLKQNQQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAK 169
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH W F+HI+RGQP+RHLLTTGWS FV++KRL AGD+ +F+R E +L +G++ R
Sbjct: 170 DLHDNTWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDEKQQLLLGIKRANR 229
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNK 237
QQ ++ SSVISS SMH+G+LA A+HA + + F ++Y PR S+F+I L KY +A+ N+
Sbjct: 230 QQPALSSSVISSDSMHIGILAAAAHAASNNSPFTIFYNPRASPSEFVIPLAKYNKALFNQ 289
Query: 238 FAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRV 296
++GMR++M FE E+S RR+ GT+ G+ D P WK+S+WR+L+V WDE + RP RV
Sbjct: 290 VSLGMRFRMMFETEESGVRRYMGTITGITDLDPVRWKNSQWRNLQVGWDESTAGERPSRV 349
Query: 297 SPWEIEPFV 305
S W+IEP V
Sbjct: 350 SIWDIEPVV 358
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 63/91 (69%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 588
R+ TKVQ G +VGR +D+T GYD L +L MF I+GQL RT+W++VY D E D
Sbjct: 998 RTYTKVQKCG-SVGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTEWKLVYVDHEND 1056
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++LVGDDPW EF + V+ I I SS +V++MS
Sbjct: 1057 ILLVGDDPWEEFVSCVQSIKILSSSEVQQMS 1087
>gi|115477344|ref|NP_001062268.1| Os08g0520500 [Oryza sativa Japonica Group]
gi|19352047|dbj|BAB85917.1| auxin response factor 7b [Oryza sativa]
gi|113624237|dbj|BAF24182.1| Os08g0520500, partial [Oryza sativa Japonica Group]
Length = 1096
Score = 281 bits (719), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 157/331 (47%), Positives = 218/331 (65%), Gaps = 10/331 (3%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ AS ++ + +IP + LPSK++C + ++ ++A+ +TDEVYA++TL P + ++ T
Sbjct: 36 EQVAASMRKDADAQIPSYPNLPSKLICILHSVTMLADPDTDEVYARMTLQPVSNCDKETL 95
Query: 61 -PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
RP+ F K LTASDTSTHGGFSV R+ A P LD + P QEL A+
Sbjct: 96 LASELALKQTRPQTEFFCKTLTASDTSTHGGFSVPRRAAERIFPRLDFSMQPPAQELQAR 155
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH W F+HI+RGQP+RHLLTTGWS FV+ KRL+AGD+ +F+R +L +G+R R
Sbjct: 156 DLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLLAGDSVLFIRDAKQQLLLGIRRANR 215
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAV-NN 236
Q +++ SSV+SS SMH+G+LA A+HA A + F +YY PR TS+F+I KY +AV N
Sbjct: 216 QPTNLSSSVLSSDSMHIGILAAAAHAAANNSQFTIYYNPRASTSEFVIPFAKYQKAVYGN 275
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+ ++GMR++M FE E+S RR+ GT+ G+ D P WK S WR+++V WDE A R R
Sbjct: 276 QLSLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKTSHWRNIQVAWDEAAPTERRTR 335
Query: 296 VSPWEIEPFVASATPNLVQPV-LAKNKRPRL 325
VS WEIEP +A P + P L KRPRL
Sbjct: 336 VSLWEIEPIIA---PFFIYPSPLFTAKRPRL 363
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 57/90 (63%), Gaps = 3/90 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL--HTRTKWEIVYTDDEGD 588
R+ TKV +G AVGR++D+ GYD L ++ MF I+GQL R W++VY D E D
Sbjct: 978 RTYTKVHKRG-AVGRSIDINRYSGYDELKHDVARMFGIEGQLGDQNRVGWKLVYEDHEKD 1036
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKM 618
++LVGDDPW +F V+ I I S Q+ +M
Sbjct: 1037 VLLVGDDPWEDFVKCVRCIRILSPQEEMQM 1066
>gi|42408525|dbj|BAD09704.1| auxin response factor 7b [Oryza sativa Japonica Group]
gi|42409173|dbj|BAD10439.1| auxin response factor 7b [Oryza sativa Japonica Group]
Length = 1113
Score = 281 bits (719), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 157/331 (47%), Positives = 215/331 (64%), Gaps = 10/331 (3%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQNEPT 59
EQ+ AS ++ + +IP + LPSK++C + ++ ++A+ +TDEVYA++TL P E
Sbjct: 53 EQVAASMRKDADAQIPSYPNLPSKLICILHSVTMLADPDTDEVYARMTLQPVTQCDKETL 112
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
RP+ F K LTASDTSTHGGFSV R+ A P LD + P QEL A+
Sbjct: 113 LASELALKQTRPQTEFFCKTLTASDTSTHGGFSVPRRAAERIFPRLDFSMQPPAQELQAR 172
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH W F+HI+RGQP+RHLLTTGWS FV+ KRL+AGD+ +F+R +L +G+R R
Sbjct: 173 DLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLLAGDSVLFIRDAKQQLLLGIRRANR 232
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAV-NN 236
Q +++ SSV+SS SMH+G+LA A+HA A + F +YY PR TS+F+I KY +AV N
Sbjct: 233 QPTNLSSSVLSSDSMHIGILAAAAHAAANNSQFTIYYNPRASTSEFVIPFAKYQKAVYGN 292
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+ ++GMR++M FE E+S RR+ GT+ G+ D P WK S WR+++V WDE A R R
Sbjct: 293 QLSLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKTSHWRNIQVAWDEAAPTERRTR 352
Query: 296 VSPWEIEPFVASATPNLVQPV-LAKNKRPRL 325
VS WEIEP +A P + P L KRPRL
Sbjct: 353 VSLWEIEPIIA---PFFIYPSPLFTAKRPRL 380
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 57/90 (63%), Gaps = 3/90 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL--HTRTKWEIVYTDDEGD 588
R+ TKV +G AVGR++D+ GYD L ++ MF I+GQL R W++VY D E D
Sbjct: 995 RTYTKVHKRG-AVGRSIDINRYSGYDELKHDVARMFGIEGQLGDQNRVGWKLVYEDHEKD 1053
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKM 618
++LVGDDPW +F V+ I I S Q+ +M
Sbjct: 1054 VLLVGDDPWEDFVKCVRCIRILSPQEEMQM 1083
>gi|326529041|dbj|BAK00914.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1176
Score = 281 bits (718), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 152/311 (48%), Positives = 209/311 (67%), Gaps = 6/311 (1%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQN-EPT 59
EQ+ AS ++++ +P + LPSK++C + NI L A+ ETDEVYA++TL P S E
Sbjct: 70 EQVAASMQKDVDAHVPNYPNLPSKLICLLHNITLHADLETDEVYARMTLQPVTSYGKEAL 129
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
RP+ F K LTASDTSTHGGFSV R+ A + PPLD + P QE+ A+
Sbjct: 130 QLSELALKQARPQNEFFCKTLTASDTSTHGGFSVPRRSAEKIFPPLDFSMQPPAQEIQAR 189
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH W F+HI+RGQP+RHLLTTGWS FV+ KRL AGD+ +F+R E +L +G+R R
Sbjct: 190 DLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVIFVRDERQQLLLGIRRANR 249
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAV-NN 236
Q +++ SSV+SS SMH+G+LA A+HA A + F ++Y PR S +F+I KY +AV N
Sbjct: 250 QPTNISSSVLSSDSMHIGILAAAAHAAANNSPFTIFYNPRASPTEFVIPFAKYQKAVYGN 309
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+ ++GMR++M FE E+ RR+ GT+ G+ D P WK+S+WR+L+V WDE A+ R +R
Sbjct: 310 QLSLGMRFRMMFETEELGTRRYMGTITGINDLDPVRWKNSQWRNLQVGWDESAAGERRNR 369
Query: 296 VSPWEIEPFVA 306
VS WEIEP A
Sbjct: 370 VSIWEIEPVAA 380
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 588
R+ TKV +G AVGR++D++ GY+ L L MF I+GQL R + W++VY D E D
Sbjct: 1042 RTFTKVYKRG-AVGRSIDISQYAGYEELKQALARMFSIEGQLEERQRIGWKLVYRDHEDD 1100
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++L+GDDPW EF N VK I I S Q+V++MS
Sbjct: 1101 ILLLGDDPWEEFVNCVKCIRILSPQEVQQMS 1131
>gi|357124927|ref|XP_003564148.1| PREDICTED: auxin response factor 16-like [Brachypodium distachyon]
Length = 1063
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 156/319 (48%), Positives = 215/319 (67%), Gaps = 9/319 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQN-EPT 59
EQ+ AS N+E++ IP + LPSK++C+++++ L A+ ETDEVYAQ+TL P + +
Sbjct: 52 EQVAASMNKEVD-VIPNYPSLPSKLICKLLSLTLHADSETDEVYAQMTLQPVSKYDRDAM 110
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
+ + F K LTASDTSTHGGFSV R+ A + PPLD P QEL+AK
Sbjct: 111 LASELGLKQNKQPMEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFAMQPPAQELMAK 170
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH W+F+HIFRGQP+RHLLTTGWS FV++KRL+AGD+ +F+R E +L +G+R R
Sbjct: 171 DLHDISWKFRHIFRGQPKRHLLTTGWSVFVSTKRLLAGDSVLFIRDEKSQLLLGIRRSTR 230
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNK 237
Q ++ SSV+SS SMH+G+LA A+HA A + F ++Y PR S+F+I L KY +A+ +
Sbjct: 231 PQPALSSSVLSSDSMHIGILAAAAHAAANSSPFTIFYNPRASPSEFVIPLAKYNKALYTQ 290
Query: 238 FAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRV 296
++GMR++M FE EDS RR+ GT+ G+ D P WK+S WR+L+V WDE + R RV
Sbjct: 291 VSLGMRFRMLFETEDSGVRRYMGTITGIGDLDPVRWKNSHWRNLQVGWDESTASERRTRV 350
Query: 297 SPWEIEPFVASATPNLVQP 315
S WEIEP ATP + P
Sbjct: 351 SIWEIEPV---ATPFYICP 366
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 588
R+ TKVQ +G +VGR++D+T YD L +L MF I+GQL R W++VY D E D
Sbjct: 947 RTFTKVQKRG-SVGRSIDITRYRNYDELRHDLACMFGIQGQLEDPYRMDWKLVYVDHEND 1005
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++LVGDDPW EF + VK I I SS +V++MS
Sbjct: 1006 ILLVGDDPWEEFVSCVKSIKILSSVEVQQMS 1036
>gi|356511421|ref|XP_003524425.1| PREDICTED: auxin response factor 25-like [Glycine max]
Length = 1099
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 165/331 (49%), Positives = 221/331 (66%), Gaps = 10/331 (3%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPS-QNEPT 59
EQ+ AS ++++ ++P + LPSKI C + N+ L A+ +TDEVYAQ+TL P PS +
Sbjct: 56 EQVAASLKKDVDAQVPNYTNLPSKIPCLLHNVTLHADPDTDEVYAQMTLQPVPSFDTDAL 115
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
S +P+ F K LTASDTSTHGGFSV R+ A + PPLD + P QELVA+
Sbjct: 116 LRSDIFLRSSKPQPEFFCKQLTASDTSTHGGFSVPRRAAEKIFPPLDYSVQPPAQELVAR 175
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH WRF+HI+RGQP+RHLLTTGWS F+ KRL+AGD+ +F+R E +L +G+R R
Sbjct: 176 DLHDNVWRFRHIYRGQPKRHLLTTGWSLFIGGKRLLAGDSVLFVRDEKQQLLLGIRRANR 235
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NN 236
Q S++ SSV+SS SMH+GVLA A+ AVA + F V+Y PR S+F+I L KY +AV ++
Sbjct: 236 QPSNLSSSVLSSDSMHIGVLAAAAQAVANNSPFTVFYNPRASPSEFVIPLAKYSKAVYSH 295
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDR 295
+ GMR++M FE EDS RR+ GT++GV D S WK+S WR+L+V WDE + R R
Sbjct: 296 HISPGMRFRMMFETEDSGTRRYMGTIIGVSDLDSVRWKNSLWRNLQVGWDESTAEERQSR 355
Query: 296 VSPWEIEPFVASATPNLV-QPVLAKNKRPRL 325
VS WEIEP TP + P ++K PRL
Sbjct: 356 VSVWEIEPVT---TPYFICPPPFFRSKIPRL 383
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 588
R+ TKV +G AVGR++D+T GY+ L +L F I+GQL R W++VY D E D
Sbjct: 987 RTYTKVYKRG-AVGRSIDITRYSGYEDLKQDLALRFGIEGQLEDLQRIGWKLVYVDHEND 1045
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++LVGDDPW EF N V+ I I S Q+V++MS
Sbjct: 1046 VLLVGDDPWEEFVNCVRCIKILSPQEVQQMS 1076
>gi|350540000|ref|NP_001234605.1| auxin response factor 19-1 [Solanum lycopersicum]
gi|310697416|gb|ADP06663.1| auxin response factor 19-1 [Solanum lycopersicum]
Length = 1090
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 158/331 (47%), Positives = 221/331 (66%), Gaps = 12/331 (3%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPS-QNEPT 59
EQ+ AS +++ +IP + LP+K++C + N+ L A+ ETDEVYAQ+TL P PS E
Sbjct: 47 EQVAASIKKDVEAQIPNYPNLPAKLICLLHNVTLHADPETDEVYAQMTLQPVPSFDKEAL 106
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
+ +P+ F K LTASDTSTHGGFSV R+ A + PPLD + P QELVA+
Sbjct: 107 LRSDLSMKANKPQPEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDYSLQPPAQELVAR 166
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH W F+H++RGQP+RHLLTTGWS V+ KRL AGD+ +F+R E + +G+R R
Sbjct: 167 DLHDNIWTFRHVYRGQPKRHLLTTGWSLVVSGKRLFAGDSVLFIRDEKHQFLLGIRKANR 226
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NN 236
Q +++ SSV+SS SMH+G+LA A+HA A + F V+Y PR S+F+I L KY +A ++
Sbjct: 227 QPTNLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRAGPSEFVIPLAKYYKATYSS 286
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+ ++GMR++M FE E+S RR+ GT+ G+ D P WK+S+WR+L+V WDE + R +R
Sbjct: 287 QISLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGERINR 346
Query: 296 VSPWEIEPFVASATPNLV--QPVLAKNKRPR 324
VS WEIEP A P L+ P + +KRPR
Sbjct: 347 VSIWEIEPITA---PFLICSSPFFS-SKRPR 373
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 588
R+ TKV +G AVGR++D+ GY+ L +L F I+GQL R + W++VY D E D
Sbjct: 978 RTYTKVYKRG-AVGRSIDIARYSGYEELKLDLARRFGIEGQLEDRQRIGWKLVYVDHEND 1036
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++LVGDDPW EF + V+ I I S Q+V++MS
Sbjct: 1037 VLLVGDDPWEEFVSCVRCIKILSPQEVQQMS 1067
>gi|356565674|ref|XP_003551063.1| PREDICTED: uncharacterized protein LOC100816054 [Glycine max]
Length = 1136
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 155/309 (50%), Positives = 206/309 (66%), Gaps = 6/309 (1%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQNEPT 59
EQ+ AS +E + IP + LPSK++C + N+ L A+ ETDEVYAQ+TL P + E
Sbjct: 51 EQVAASMQKEAD-FIPSYPNLPSKLICMLHNVALHADPETDEVYAQMTLQPVNKYEKEAI 109
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
R F K LTASDTSTHGGFSV R+ A + LPPLD + P QELVAK
Sbjct: 110 LASDIGLKQNRQPTEFFCKTLTASDTSTHGGFSVPRRAAEKILPPLDYSMQPPAQELVAK 169
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH W F+HI+RGQP+RHLLTTGWS FV++KRL AGD+ +F+R E L +G+R R
Sbjct: 170 DLHDNTWAFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDEKQHLLLGIRRANR 229
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNK 237
QQ ++ SSVISS SMH+G+LA A+HA A + F ++Y PR S+F++ L KY +A+ +
Sbjct: 230 QQPALSSSVISSDSMHIGILAAAAHAAANNSPFTIFYNPRASPSEFVVPLAKYNKAMYTQ 289
Query: 238 FAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRV 296
++GMR++M FE E+S R + GT+ G+ D P WK S+WR+++V WDE + RP RV
Sbjct: 290 VSLGMRFRMMFETEESGVRGYMGTITGISDLDPVRWKSSQWRNIQVGWDESTAGERPRRV 349
Query: 297 SPWEIEPFV 305
S WEIEP V
Sbjct: 350 SIWEIEPVV 358
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 63/91 (69%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 588
R+ TKVQ +G +VGR +D+T GYD L +L MF I+GQL RT W++VY D E D
Sbjct: 1008 RTYTKVQKRG-SVGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPLRTDWKLVYVDHEND 1066
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++LVGDDPW EF + V+ I I SS +V++MS
Sbjct: 1067 ILLVGDDPWDEFVSCVQSIKILSSAEVQQMS 1097
>gi|158512935|sp|A2YAA5.1|ARFP_ORYSI RecName: Full=Auxin response factor 16
gi|125554410|gb|EAZ00016.1| hypothetical protein OsI_22015 [Oryza sativa Indica Group]
Length = 1055
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 154/319 (48%), Positives = 212/319 (66%), Gaps = 9/319 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQNEPT 59
EQ+ AS ++EL+ IP + LPSK++C+++++ L A+ ETDEVY Q+TL P +
Sbjct: 52 EQVAASMHKELD-NIPGYPSLPSKLICKLLSLTLHADSETDEVYVQMTLQPVNKYDRDAM 110
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
+ F K LTASDTSTHGGFSV R+ A + PPLD P QEL+AK
Sbjct: 111 LASELGLKQNKQPAEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFTMQPPAQELIAK 170
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH W+F+HI+RGQP+RHLLTTGWS FV++KRL+AGD+ +F+R E +L +G+R R
Sbjct: 171 DLHDISWKFRHIYRGQPKRHLLTTGWSVFVSTKRLLAGDSVLFIRDEKSQLLLGIRRATR 230
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNK 237
Q ++ SSV+SS SMH+G+LA A+HA A + F ++Y PR S+F+I L KY +A+ +
Sbjct: 231 PQPALSSSVLSSDSMHIGILAAAAHAAANSSPFTIFYNPRASPSEFVIPLAKYNKALYTQ 290
Query: 238 FAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRV 296
++GMR++M FE EDS RR+ GT+ G+ D P WK+S WR+L+V WDE + R RV
Sbjct: 291 VSLGMRFRMLFETEDSGVRRYMGTITGIGDLDPVRWKNSHWRNLQVGWDESTASERRTRV 350
Query: 297 SPWEIEPFVASATPNLVQP 315
S WEIEP ATP + P
Sbjct: 351 SIWEIEPV---ATPFYICP 366
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 588
R+ TKVQ +G +VGR++D+T YD L +L MF I+GQL R W++VY D E D
Sbjct: 940 RTFTKVQKRG-SVGRSIDITRYRDYDELRHDLACMFGIQGQLEDPYRMDWKLVYVDHEND 998
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++LVGDDPW EF VK I I S+ +V++MS
Sbjct: 999 ILLVGDDPWEEFVGCVKSIKILSAAEVQQMS 1029
>gi|356527714|ref|XP_003532453.1| PREDICTED: auxin response factor 25-like [Glycine max]
Length = 1113
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 162/331 (48%), Positives = 221/331 (66%), Gaps = 10/331 (3%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPS-QNEPT 59
EQ+ AS ++++ ++P + LPSKI C + N+ L A+ +TDEVYAQ+ L P PS +
Sbjct: 56 EQVAASLKKDVDAQVPNYTNLPSKIPCLLHNVTLHADPDTDEVYAQMALRPVPSFDTDAL 115
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
+P+ F K LTASDTSTHGGFSV R+ A + PPLD + +P QELVA+
Sbjct: 116 LRSDISLKLSKPQPEFFCKQLTASDTSTHGGFSVPRRAAEKIFPPLDYSLQSPVQELVAR 175
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH WRF+HI+RG+P+RHLLTTGWS F++ KRL+AGD+ +F+R E +L +G+R R
Sbjct: 176 DLHDNVWRFRHIYRGKPKRHLLTTGWSLFISGKRLLAGDSVLFVRDEKQQLLLGIRRANR 235
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NN 236
Q S++ SSV+SS SMH+GVLA A+ AVA + F V+Y PR S+F+I L KY +AV ++
Sbjct: 236 QPSNLSSSVLSSDSMHIGVLAAAAQAVANNSPFTVFYNPRASPSEFVIPLAKYYKAVYSH 295
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDR 295
+ GM ++M FE EDS RR+ GT++GV D S WK+S WR+L+V WDE + R R
Sbjct: 296 HISPGMHFRMTFETEDSGTRRYMGTIIGVSDLDSVRWKNSLWRNLQVGWDESTAEDRRSR 355
Query: 296 VSPWEIEPFVASATPNLV-QPVLAKNKRPRL 325
VS WEIEP TP + P ++KRPRL
Sbjct: 356 VSVWEIEPV---TTPYFICPPPFFRSKRPRL 383
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 588
R+ TKV +G AVGR++D+T GY+ L +L F I+GQL R + W++VY D E D
Sbjct: 1001 RTYTKVYKRG-AVGRSIDITRYSGYEELKQDLALKFGIEGQLEDRERIGWKLVYVDHEND 1059
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++LVGDDPW EF N V+ I I S Q+V++MS
Sbjct: 1060 VLLVGDDPWEEFVNCVRCIKILSPQEVQQMS 1090
>gi|413935566|gb|AFW70117.1| hypothetical protein ZEAMMB73_866690 [Zea mays]
Length = 1147
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 165/366 (45%), Positives = 233/366 (63%), Gaps = 18/366 (4%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQN-EPT 59
EQ+ AS ++++ +P + LPSK++C + ++ L A+ +TDEVYAQ+TL P + E
Sbjct: 72 EQVAASMQKDIDAHVPSYPNLPSKLICLLHSVTLHADPDTDEVYAQMTLQPVNTYGKEAL 131
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
RP++ F K LTASDTSTHGGFSV R+ A + LPPLD P QEL A+
Sbjct: 132 QLSELALKHARPQMEFFCKTLTASDTSTHGGFSVPRRAAEKILPPLDFGMQPPAQELQAR 191
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
D+H W F+HIFRGQP+RHLLTTGWS FV KRL AGD+ +F+R E +L +G+R +R
Sbjct: 192 DIHDNVWTFRHIFRGQPKRHLLTTGWSLFVGGKRLFAGDSVIFVRDERQQLLLGIRRASR 251
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAV-NN 236
Q +++ SSV+SS SMH+GVLA A+HA A + F ++Y PR S +F+I K+ +A+ +N
Sbjct: 252 QPTNISSSVLSSDSMHIGVLAAAAHAAANNSPFTIFYNPRASPTEFVIPFAKFQKALYSN 311
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+ ++GMR++M FE E+ RR+ GT+ G+ D P WK+S+WR+L+V WDE A+ R +R
Sbjct: 312 QISLGMRFRMMFETEELGMRRYMGTITGITDLDPVRWKNSQWRNLQVGWDESAAGERRNR 371
Query: 296 VSPWEIEPFVASATPNLV--QPVLAKNKRPR-LSMEVPPLDLPSAASAPW-----SARLA 347
VS WEIEP A P + QP KRPR + E ++ + PW + A
Sbjct: 372 VSMWEIEPIAA---PFFICPQPFFGV-KRPRQIDDESSEMENLFKRAMPWLGEEICIKDA 427
Query: 348 QSHNLT 353
Q+HN T
Sbjct: 428 QTHNTT 433
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 588
R+ TKV +G AVGR++D+ GY+ L + MF I+GQL R + W++VYTD E D
Sbjct: 1014 RTFTKVYKRG-AVGRSIDIGRFSGYEELKHAVARMFGIEGQLEDRQRIGWKLVYTDHEDD 1072
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++L+GDDPW EF N VK I I S Q+V++MS
Sbjct: 1073 VLLLGDDPWEEFVNCVKCIRILSPQEVQQMS 1103
>gi|158563960|sp|Q6YZW0.2|ARFU_ORYSJ RecName: Full=Auxin response factor 21; AltName: Full=OsARF7b
Length = 1116
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 157/334 (47%), Positives = 216/334 (64%), Gaps = 13/334 (3%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPS----QN 56
EQ+ AS ++ + +IP + LPSK++C + ++ ++A+ +TDEVYA++TL P +
Sbjct: 53 EQVAASMRKDADAQIPSYPNLPSKLICILHSVTMLADPDTDEVYARMTLQPVSNVTQCDK 112
Query: 57 EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQEL 116
E RP+ F K LTASDTSTHGGFSV R+ A P LD + P QEL
Sbjct: 113 ETLLASELALKQTRPQTEFFCKTLTASDTSTHGGFSVPRRAAERIFPRLDFSMQPPAQEL 172
Query: 117 VAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRC 176
A+DLH W F+HI+RGQP+RHLLTTGWS FV+ KRL+AGD+ +F+R +L +G+R
Sbjct: 173 QARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLLAGDSVLFIRDAKQQLLLGIRR 232
Query: 177 LARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAV 234
RQ +++ SSV+SS SMH+G+LA A+HA A + F +YY PR TS+F+I KY +AV
Sbjct: 233 ANRQPTNLSSSVLSSDSMHIGILAAAAHAAANNSQFTIYYNPRASTSEFVIPFAKYQKAV 292
Query: 235 -NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITR 292
N+ ++GMR++M FE E+S RR+ GT+ G+ D P WK S WR+++V WDE A R
Sbjct: 293 YGNQLSLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKTSHWRNIQVAWDEAAPTER 352
Query: 293 PDRVSPWEIEPFVASATPNLVQPV-LAKNKRPRL 325
RVS WEIEP +A P + P L KRPRL
Sbjct: 353 RTRVSLWEIEPIIA---PFFIYPSPLFTAKRPRL 383
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 57/90 (63%), Gaps = 3/90 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL--HTRTKWEIVYTDDEGD 588
R+ TKV +G AVGR++D+ GYD L ++ MF I+GQL R W++VY D E D
Sbjct: 998 RTYTKVHKRG-AVGRSIDINRYSGYDELKHDVARMFGIEGQLGDQNRVGWKLVYEDHEKD 1056
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKM 618
++LVGDDPW +F V+ I I S Q+ +M
Sbjct: 1057 VLLVGDDPWEDFVKCVRCIRILSPQEEMQM 1086
>gi|326487574|dbj|BAK05459.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 970
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 156/319 (48%), Positives = 214/319 (67%), Gaps = 9/319 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQNEPT 59
EQ+ AS ++E++ IP + LPSK++C+++++ L A+ ETDEVYAQ+TL P +
Sbjct: 52 EQVAASMHKEVD-IIPNYPSLPSKLICKLLSLTLHADSETDEVYAQMTLQPVNKYDRDAM 110
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
+ V F K LTASDTSTHGGFSV R+ A + PPLD P QEL+AK
Sbjct: 111 LASELGLKQNKQPVEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFTMQPPAQELMAK 170
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH W+F+HIFRGQP+RHLLTTGWS FV++KRL+AGD+ +F+R E +L +G+R R
Sbjct: 171 DLHDIPWKFRHIFRGQPKRHLLTTGWSVFVSTKRLLAGDSVLFIRDEKSQLLLGIRRATR 230
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNK 237
Q ++ SSV+SS SMH+G+LA A+HA A + F ++Y PR S+F+I L KY +A+ +
Sbjct: 231 PQPALSSSVLSSDSMHIGILAAAAHAAANSSPFTIFYNPRASPSEFVIPLAKYNKALYTQ 290
Query: 238 FAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRV 296
++GMR++M FE EDS RR+ GT+ G+ D P WK+S WR+L+V WDE + R RV
Sbjct: 291 VSLGMRFRMLFETEDSGVRRYMGTITGIGDLDPVRWKNSHWRNLQVGWDESTASERRTRV 350
Query: 297 SPWEIEPFVASATPNLVQP 315
S WEIEP ATP + P
Sbjct: 351 SIWEIEPV---ATPFYICP 366
>gi|356547962|ref|XP_003542373.1| PREDICTED: uncharacterized protein LOC100805456 [Glycine max]
Length = 1131
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 154/309 (49%), Positives = 204/309 (66%), Gaps = 6/309 (1%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQNEPT 59
EQ+ AS +E + IP + LPSK++C + N+ L A+ ETDEVYAQ+TL P + E
Sbjct: 51 EQVAASMQKEAD-FIPSYPNLPSKLICMLHNVALHADPETDEVYAQMTLQPVNKYEKEAI 109
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
R F K LTASDTSTHGGFSV R+ A + PPLD + P QELVAK
Sbjct: 110 LASDMGLKQNRQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDYSMQPPAQELVAK 169
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH W F+HI+RGQP+RHLLTTGWS FV++KRL AGD+ +F+R E L +G+R R
Sbjct: 170 DLHDNTWAFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDEKQHLLLGIRRANR 229
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNK 237
QQ ++ SSVISS SMH+G+LA A+HA A + F ++Y PR S+F++ L KY + +
Sbjct: 230 QQPALSSSVISSDSMHIGILAAAAHAAANNSPFTIFYNPRASPSEFVVPLAKYNKVTYTQ 289
Query: 238 FAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRV 296
++GMR++M FE E+S RR+ GT+ G+ D P WK S+WR+++V WDE + RP RV
Sbjct: 290 VSLGMRFRMMFETEESGVRRYMGTITGINDLDPVRWKSSQWRNIQVGWDESTAGERPSRV 349
Query: 297 SPWEIEPFV 305
S WEIEP V
Sbjct: 350 SIWEIEPVV 358
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 63/91 (69%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 588
R+ TKVQ +G +VGR +D+T GYD L +L MF I+GQL RT W++VY D E D
Sbjct: 1003 RTYTKVQKRG-SVGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPLRTDWKLVYVDHEND 1061
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++LVGDDPW EF + V+ I I SS +V++MS
Sbjct: 1062 ILLVGDDPWDEFVSCVQSIKILSSAEVQQMS 1092
>gi|132449787|gb|ABO33637.1| auxin response factor, partial [Solanum lycopersicum]
Length = 1123
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 154/309 (49%), Positives = 205/309 (66%), Gaps = 6/309 (1%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQNEPT 59
EQ+ AS +E + IP + LPSK++C + N+ L A+ ETDEVYAQ+TL P E
Sbjct: 37 EQVAASMQKETD-GIPSYPNLPSKLICMLHNVTLHADTETDEVYAQMTLQPVNKYDQEAL 95
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
R F K LTASDTSTHGGFSV R+ A + PPLD P QEL+A+
Sbjct: 96 LLSEMGLKQNRQPAEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDYAMQPPAQELMAR 155
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH W F+HI+RGQP+RHLLTTGWS F++SKRL AGD+ +F+R E +L +G++ R
Sbjct: 156 DLHDQTWTFRHIYRGQPKRHLLTTGWSVFISSKRLCAGDSVLFIRDEKSQLLLGIKRTNR 215
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNK 237
QQ ++ SSVISS SMH+G+LA A+HA A + F ++Y PR S+F+I L KY +A+ +
Sbjct: 216 QQPALSSSVISSDSMHIGILAAAAHAAANNSPFTIFYNPRASPSEFVIPLAKYNKAMYAQ 275
Query: 238 FAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRV 296
++GMR++M FE E+S RR+ GT+ GV D P WK S+WR+L+V WDE + RP RV
Sbjct: 276 VSLGMRFRMMFETEESGVRRYMGTITGVSDLDPIRWKSSQWRNLQVGWDESTAGERPSRV 335
Query: 297 SPWEIEPFV 305
S W+IEP V
Sbjct: 336 SIWDIEPVV 344
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/96 (48%), Positives = 65/96 (67%), Gaps = 3/96 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 588
R+ TKVQ +G +VGR +D+T +GYD L +L MF I+GQL RT+W++VY D E D
Sbjct: 997 RTYTKVQKRG-SVGRTIDVTRYIGYDELRHDLARMFGIEGQLEDPQRTEWKLVYVDHEND 1055
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 624
++LVGDDPW EF + V+ I I S +V++MS L
Sbjct: 1056 ILLVGDDPWEEFVSCVQSIKILSCAEVQQMSLNGDL 1091
>gi|295844328|gb|ADG43161.1| auxin response factor 27 [Zea mays]
gi|413952805|gb|AFW85454.1| hypothetical protein ZEAMMB73_050536 [Zea mays]
Length = 1053
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 152/318 (47%), Positives = 210/318 (66%), Gaps = 7/318 (2%)
Query: 2 EQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQNEPTT 60
EQ+ AS ++EL+ LPSK++C+++++ L A+ ETDEVYAQ+ L P +
Sbjct: 52 EQVAASMHKELDTVPSYPSLPSKLICKLLSLTLHADSETDEVYAQMMLQPVNKYDRDAML 111
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
+ F K LTASDTSTHGGFSV R+ A + PPLD P QEL+AKD
Sbjct: 112 ASELGLKQNKQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFTMQPPAQELIAKD 171
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
LH W+F+HI+RGQP+RHLLTTGWS FV++KRL+AGD+ +F+R E +L +G+R +R
Sbjct: 172 LHDISWKFRHIYRGQPKRHLLTTGWSVFVSTKRLLAGDSVLFIRDEKSQLLLGIRRASRP 231
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKF 238
Q ++ SSV+SS SMH+G+LA A+HA A + F ++Y PR S+F+I L KY +A+ +
Sbjct: 232 QPALSSSVLSSDSMHIGILAAAAHAAANSSPFTIFYNPRASPSEFVIPLAKYNKALYTQV 291
Query: 239 AVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVS 297
++GMR++M FE EDS RR+ GT+ G+ D P WK+S WR+L+V WDE + R RVS
Sbjct: 292 SLGMRFRMLFETEDSGVRRYMGTITGIGDLDPLRWKNSHWRNLQVGWDESTASERRTRVS 351
Query: 298 PWEIEPFVASATPNLVQP 315
WEIEP ATP + P
Sbjct: 352 IWEIEPV---ATPFYICP 366
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 64/91 (70%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 588
R+ TKVQ +G +VGR++D+T GY+ L +L MF I+GQL RT W++VY D E D
Sbjct: 939 RTFTKVQKRG-SVGRSIDITRYRGYEDLRHDLACMFGIQGQLEDPYRTDWKLVYVDHEND 997
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++LVGDDPW EF + VK I I SS +V++MS
Sbjct: 998 ILLVGDDPWEEFVSCVKSIKILSSVEVQQMS 1028
>gi|222619023|gb|EEE55155.1| hypothetical protein OsJ_02959 [Oryza sativa Japonica Group]
Length = 658
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 146/328 (44%), Positives = 202/328 (61%), Gaps = 14/328 (4%)
Query: 40 TDEVYAQITLLP-----EPSQNEPTTPDPCPADS------PRPKVHSFSKVLTASDTSTH 88
TDEVYAQ++L+ E E C + P H F K LTASDTSTH
Sbjct: 40 TDEVYAQVSLVADNEEVERRMREGEDGAACDGEGEDAVKRPARIPHMFCKTLTASDTSTH 99
Query: 89 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 148
GGFSV R+ A +C PPLD + P QELVAKDLHG EWRF+HI+RGQPRRHLLTTGWS F
Sbjct: 100 GGFSVPRRAAEDCFPPLDYSLQRPFQELVAKDLHGTEWRFRHIYRGQPRRHLLTTGWSGF 159
Query: 149 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 208
+ K+LV+GD +FLRGE+GEL +GVR A+ +++ P + +Q + L+ +HAVA
Sbjct: 160 INKKKLVSGDAVLFLRGEDGELRLGVRRAAQLKNASPFPALHNQISNTSSLSEVAHAVAV 219
Query: 209 QTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 266
+++F +YY PR SQ FII K++ + + F+VGMR+K+R+E ED+ ERR +G ++G
Sbjct: 220 KSIFHIYYNPRLSQSEFIIPYWKFMRSFSQPFSVGMRFKLRYESEDASERRRTGIIIGSR 279
Query: 267 DFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLS 326
+ P W SKW+ L V+WD+ RP+ VSPWEIE + + +L P +K +
Sbjct: 280 EADPMWHGSKWKCLVVKWDDDVECRRPNGVSPWEIELSGSVSGSHLSTP-HSKRLKSCFP 338
Query: 327 MEVPPLDLPSAASAPWSARLAQSHNLTQ 354
P + LP+ + + A A+ H + Q
Sbjct: 339 QVNPDIVLPNGSVSSDFAESARFHKVLQ 366
>gi|379323204|gb|AFD01301.1| auxin response factor 5-3 [Brassica rapa subsp. pekinensis]
Length = 470
Score = 278 bits (711), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 149/307 (48%), Positives = 205/307 (66%), Gaps = 15/307 (4%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEP-T 59
EQ+ ST + ++P + LPS+++C+V N+ L A++++DE+YAQ++L P S+ +
Sbjct: 76 EQVAVSTRRSATTQVPNYPNLPSQLMCQVHNVTLHADKDSDEIYAQMSLQPVHSERDVFP 135
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
PD + + F K LTASDTSTHGGFSV R+ A + PPLD PTQELV +
Sbjct: 136 VPDFGLLNRSKHPAEFFCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYTAQPPTQELVVR 195
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH W F+HI+RGQP+RHLLTTGWS FV SKRL AGD+ +F+R E +L VGVR R
Sbjct: 196 DLHENTWTFRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANR 255
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NN 236
QQ+++PSSV+S+ SMH+GVLA A+HA A +T F+++Y PR ++F+I L KY +A+
Sbjct: 256 QQTALPSSVLSADSMHIGVLAAAAHATANRTPFLIFYNPRACPAEFVIPLAKYRKAICGA 315
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+ + GMR+ M FE EDS +R D P W SKWR+L+V+WDEP +P R
Sbjct: 316 QLSAGMRFGMMFETEDSGKR---------SDMDPLRWSGSKWRNLQVEWDEPGCNDKPTR 366
Query: 296 VSPWEIE 302
VSPW+IE
Sbjct: 367 VSPWDIE 373
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 30/42 (71%)
Query: 578 WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
W++VY D E D++LVGDDPW EF V+ I I S +V++MS
Sbjct: 408 WKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPTEVEQMS 449
>gi|295844314|gb|ADG43154.1| auxin response factor 20 [Zea mays]
Length = 1149
Score = 278 bits (710), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 164/368 (44%), Positives = 233/368 (63%), Gaps = 20/368 (5%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQN-EPT 59
EQ+ AS ++++ +P + LPSK++C + ++ L A+ +TDEVYAQ+TL P + E
Sbjct: 72 EQVAASMQKDIDAHVPSYPNLPSKLICLLHSVTLHADPDTDEVYAQMTLQPVNTYGKEAL 131
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
RP++ F K LTASDTSTHGGFSV R+ A + LPPLD P QEL A+
Sbjct: 132 QLSELALKHARPQMEFFCKTLTASDTSTHGGFSVPRRAAEKILPPLDFGMQPPAQELQAR 191
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
D+H W F+HIFRGQP+RHLLTTGWS FV KRL AGD+ +F+R E +L +G+R +R
Sbjct: 192 DIHDNVWTFRHIFRGQPKRHLLTTGWSLFVGGKRLFAGDSVIFVRDERQQLLLGIRRASR 251
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT----SQFIISLNKYLEAV- 234
Q +++ SSV+SS SMH+GVLA A+HA A + F ++Y PR ++F+I K+ +A+
Sbjct: 252 QPTNISSSVLSSDSMHIGVLAAAAHAAANNSPFTIFYNPRRVASPTEFVIPFAKFQKALY 311
Query: 235 NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRP 293
+N+ ++GMR++M FE E+ RR+ GT+ G+ D P WK+S+WR+L+V WDE A+ R
Sbjct: 312 SNQISLGMRFRMMFETEELGMRRYMGTITGITDLDPVRWKNSQWRNLQVGWDESAAGERR 371
Query: 294 DRVSPWEIEPFVASATPNLV--QPVLAKNKRPR-LSMEVPPLDLPSAASAPW-----SAR 345
+RVS WEIEP A P + QP KRPR + E ++ + PW +
Sbjct: 372 NRVSMWEIEPI---AAPFFICPQPFFGV-KRPRQIDDESSEMENLFKRAMPWLGEEICIK 427
Query: 346 LAQSHNLT 353
AQ+HN T
Sbjct: 428 DAQTHNTT 435
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 588
R+ TKV +G AVGR++D+ GY+ L + MF I+GQL R + W++VYTD E D
Sbjct: 1016 RTFTKVYKRG-AVGRSIDIGRFSGYEELKHAVARMFGIEGQLEDRQRIGWKLVYTDHEDD 1074
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++L+GDDPW EF N VK I I S Q+V++MS
Sbjct: 1075 VLLLGDDPWEEFVNCVKCIRILSPQEVQQMS 1105
>gi|291196865|emb|CAX63113.1| ETTIN protein [Cabomba aquatica]
Length = 744
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 144/327 (44%), Positives = 204/327 (62%), Gaps = 17/327 (5%)
Query: 24 KILCRVVNIHLMAEQETDEVYAQITLLPEP-----------SQNEPTTPDPCPADSPRPK 72
+I+CRVV++ L AE DE+YAQ++LL E S N R
Sbjct: 1 QIICRVVDVKLQAEVSNDELYAQVSLLAEDEVGFLDESVVRSLNGGEEVSEENQGIRRTI 60
Query: 73 VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIF 132
H F K LTASDTSTHGGFSV R+ A +C PPLD +Q P+QEL AKDL+G+ WRF+HI+
Sbjct: 61 PHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELTAKDLYGFIWRFRHIY 120
Query: 133 RGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ-QSSMPSSVISS 191
RGQPRRHLLTTGWS+F K+L GD +FLR ++GEL +G+R RQ Q +P + +
Sbjct: 121 RGQPRRHLLTTGWSSFANKKKLKPGDAVLFLRVDDGELRLGIRRATRQSQCCVPYTGLLC 180
Query: 192 QSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFE 249
Q + +L+ + A++ + +F +YY PR S +F++ KYL + ++ F++GMR K+R E
Sbjct: 181 QLSRVNMLSMVADALSVKKLFHIYYNPRASPAEFMVPYWKYLRSCSHPFSMGMRLKIRVE 240
Query: 250 GEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASA 308
ED+ E+R++G + GV D P W +SKWR L V+WD+ A DRVSPWEIE +S
Sbjct: 241 TEDAVEKRYTGHITGVGDVDPIRWPNSKWRCLVVRWDDNADTCLHDRVSPWEIEQ--SSL 298
Query: 309 TPNLVQPVLAKNKRPRLSMEVPPLDLP 335
+ P+ + +KRP+++ D+P
Sbjct: 299 VSSFSFPLKSTSKRPKMNFPSIITDIP 325
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 90/172 (52%), Gaps = 17/172 (9%)
Query: 447 KTETGTSCRLFGIELINHATSS--APSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKE 504
+T + +CRLFG L S P ++ VS L +++ +D
Sbjct: 566 ETYSKGNCRLFGFSLKTDEASKLEEPIQRALVSPLDIFHSGMTSHQTFPPTD-------- 617
Query: 505 FKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEE 564
K + +SP S Q S R TKV Q VGRA+DLT L GYD LI ELE
Sbjct: 618 ---PKISGIHLSPNSGGSLQP---STRRCTKVYKQESLVGRAVDLTKLTGYDDLIFELER 671
Query: 565 MFDIKGQLHT-RTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDV 615
+ D++G L R W++VYTD+ DMMLVGD+PW EFC++V +I I + ++V
Sbjct: 672 LLDMEGLLRDPRKGWQVVYTDNVSDMMLVGDEPWQEFCDIVSKIHIFTREEV 723
>gi|38346082|emb|CAE04850.2| OSJNBa0084K01.22 [Oryza sativa Japonica Group]
gi|116309860|emb|CAH66895.1| OSIGBa0099L20.10 [Oryza sativa Indica Group]
Length = 954
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 161/347 (46%), Positives = 223/347 (64%), Gaps = 18/347 (5%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ A+T + N RIP + LPS++LC+V NI L A+++TDEVYAQ+TL P S+ +
Sbjct: 67 EQVAATTRKIPNSRIPNYPNLPSQLLCQVHNITLHADKDTDEVYAQMTLQPVNSETD-VF 125
Query: 61 PDPCPADSPRPK--VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
P P + K F K LTASDTSTHGGFSV R+ A + P LD + P QEL+
Sbjct: 126 PIPTLGAYTKSKHPTEYFCKNLTASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIV 185
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
+DLH W F+HI+RGQP+RHLLTTGWS FV +KRL AGD+ +F+R E +L +GVR
Sbjct: 186 RDLHDNMWTFRHIYRGQPKRHLLTTGWSLFVGAKRLKAGDSVLFIRDEKSQLLLGVRRAT 245
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV-VYYKPRTSQFIISLNKYLEAVNNK 237
RQQ+ + SSV+S+ SMH+GVLA A+HA ++ ++ S F+I + +Y +A +
Sbjct: 246 RQQTMLSSSVLSTDSMHIGVLAAAAHAASSAFGHSWNLHRTSPSPFVIPVARYNKATYMQ 305
Query: 238 FAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRV 296
+VGMR+ M FE E+S +RR++GTVVG+ D+ P W +SKWR+L+V+WDE RP+RV
Sbjct: 306 PSVGMRFAMMFETEESSKRRYTGTVVGISDYDPMRWPNSKWRNLQVEWDEHGYGERPERV 365
Query: 297 SPWEIEPFVASATP--NLVQPVLAKNKR----PRLSMEVPPLDLPSA 337
S W+IE TP LV P N + P + VP +++ SA
Sbjct: 366 SIWDIE------TPENTLVFPSSTLNSKRQCLPGYGVSVPGMEIGSA 406
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 588
R+ TKVQ QG +VGR++D+T Y L + MF ++G+L ++W++VY D E D
Sbjct: 851 RTYTKVQKQG-SVGRSIDVTGFRNYHELRSAIACMFGLQGKLEHPGSSEWKLVYVDYEND 909
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++LVGDDPW EF N V+ I I S +V++MS
Sbjct: 910 VLLVGDDPWEEFINCVRCIRILSPSEVQQMS 940
>gi|356556410|ref|XP_003546519.1| PREDICTED: uncharacterized protein LOC100815277 [Glycine max]
Length = 1122
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 152/309 (49%), Positives = 206/309 (66%), Gaps = 6/309 (1%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQNEPT 59
EQ+ AS +E + IP + LPSK++C + N+ L A+ ETDEVYAQ+TL P E
Sbjct: 51 EQVAASMQKEAD-FIPSYPNLPSKLICMLHNVALHADPETDEVYAQMTLQPVNKYDKEAI 109
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
+ F K LTASDTSTHGGFSV R+ A + PPLD + P QE+VAK
Sbjct: 110 LASDMGLKQNQQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAK 169
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH W F+HI+RGQP+RHLLTTGWS FV++KRL AGD+ +F+R E +L +G++ R
Sbjct: 170 DLHDNTWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDEKQQLLLGIKRANR 229
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNK 237
QQ ++ SSVISS SMH+G+LA A+HA + + F ++Y PR S+F+I KY +A+ N
Sbjct: 230 QQPALSSSVISSDSMHIGILAAAAHAASNNSPFTIFYNPRASPSEFVIPSAKYNKALYNH 289
Query: 238 FAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRV 296
++GMR++M FE E+S RR+ GT+ G+ D P WK+S+WR+L+V WDE + RP RV
Sbjct: 290 ASLGMRFRMMFETEESGVRRYMGTITGITDVDPVRWKNSQWRNLQVGWDESTAGERPSRV 349
Query: 297 SPWEIEPFV 305
S W+IEP V
Sbjct: 350 SIWDIEPVV 358
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 63/91 (69%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 588
R+ TKVQ G +VGR +D+T GYD L +L MF I+GQL RT+W++VY D E D
Sbjct: 995 RTYTKVQKCG-SVGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTEWKLVYVDHEND 1053
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++LVGDDPW EF + V+ I I SS +V+KMS
Sbjct: 1054 ILLVGDDPWEEFVSCVQSIKILSSAEVQKMS 1084
>gi|357148474|ref|XP_003574778.1| PREDICTED: auxin response factor 21-like [Brachypodium distachyon]
Length = 1088
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 176/433 (40%), Positives = 247/433 (57%), Gaps = 24/433 (5%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPS----QN 56
EQ+ AS ++ + +IP + LPSK++C + N+ + A+ +TDEVYA++TL P +
Sbjct: 52 EQVAASMRKDADAQIPSYPNLPSKLICILHNVTMEADPDTDEVYARMTLQPVSNVTQCDK 111
Query: 57 EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQEL 116
E RP+ F K LTASDTSTHGGFSV R+ A P LD + P QEL
Sbjct: 112 EILLASEIALKQSRPQTEFFCKTLTASDTSTHGGFSVPRRAAERIFPQLDFSLQPPAQEL 171
Query: 117 VAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRC 176
A+DLH W F+HIFRGQP+RHLLTTGWS F++ KRL+AGD+ +F+R +L +G+R
Sbjct: 172 QARDLHDNTWTFRHIFRGQPKRHLLTTGWSLFISGKRLLAGDSVLFIRDGKHQLLLGIRR 231
Query: 177 LARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV 234
RQ +++ SSV+SS SMH+GVLA A+HA A + F ++Y PR S+F+I KY +AV
Sbjct: 232 ANRQPTNLSSSVLSSDSMHIGVLAAAAHAAANNSQFTIFYNPRASPSEFVIPFAKYQKAV 291
Query: 235 -NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITR 292
+N+ ++GMR++M FE E+S RR+ GT+ G+ D P WK S+WRS++V WDE A R
Sbjct: 292 YSNQLSLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKSSQWRSIQVAWDEAAPTER 351
Query: 293 PDRVSPWEIEPFVASATPNLVQPV-LAKNKRPR----LSMEVPPLDLPSAASAPWSARLA 347
RVS WEIEP +A P + P L KR R + E +D + PW
Sbjct: 352 RTRVSLWEIEPVIA---PFFIYPSPLFTAKRARQPGMIDDETSEMDNLFKRTMPWLGEDI 408
Query: 348 QSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQ 407
+L + A + + W + + S ++ T E L S K Q L
Sbjct: 409 CKKDLNSQNSIAPGLNLVQSLQWMNMQQNLS-----LAGTGMQPELLNSLASKHVQNL-- 461
Query: 408 EAIDDNKNISAWP 420
A D ++ IS P
Sbjct: 462 SAADISRQISFQP 474
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 59/90 (65%), Gaps = 3/90 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL--HTRTKWEIVYTDDEGD 588
R+ TKV +G AVGR++D+ GYD L ++ MF I+GQL +R W++VY D E D
Sbjct: 975 RTYTKVHKRG-AVGRSIDINRYSGYDELKHDIARMFGIEGQLGDQSRVGWKLVYEDHEKD 1033
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKM 618
++LVGDDPW +F N V+ I I S Q+ +M
Sbjct: 1034 VLLVGDDPWEDFLNCVRCIRILSPQEEMQM 1063
>gi|357520645|ref|XP_003630611.1| Auxin response factor [Medicago truncatula]
gi|355524633|gb|AET05087.1| Auxin response factor [Medicago truncatula]
Length = 1096
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 155/311 (49%), Positives = 214/311 (68%), Gaps = 6/311 (1%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQN-EPT 59
EQ+ AS ++ + ++P + LPSK+ C + ++ L A+ +TDEVYA++TL P S + +
Sbjct: 59 EQVAASLKKDGDVQVPNYSNLPSKLPCTLHSLTLHADSDTDEVYARMTLQPVSSFDMDAI 118
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
S +P+ F K LTASDTSTHGGFSV R+ A + PPLD + P QELVAK
Sbjct: 119 LRSDISLKSNKPQPEFFCKQLTASDTSTHGGFSVPRRAAEKIFPPLDFSAQPPAQELVAK 178
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLHG W+F+HI+RGQP+RHLLTTGWS F++ KRL+AGD+ +F+R E +L +G+R R
Sbjct: 179 DLHGNVWKFRHIYRGQPKRHLLTTGWSLFISGKRLLAGDSVLFIRDEKQQLLLGIRRANR 238
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NN 236
Q +++ SSV+SS SMH+G+LA A+HA A + F V+Y PR S+F+I L KY AV ++
Sbjct: 239 QPTNLSSSVLSSDSMHIGILAAAAHASANNSPFTVFYNPRASPSEFVIPLAKYYRAVYSH 298
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDR 295
+ + GMR++M FE EDS RR+ GTV+GV D S WK+S+WR+L+V WDE + R R
Sbjct: 299 QISPGMRFRMMFETEDSGTRRYMGTVIGVSDLDSVRWKNSQWRNLQVGWDEATAGERRSR 358
Query: 296 VSPWEIEPFVA 306
VS WEIEP A
Sbjct: 359 VSIWEIEPVTA 369
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 588
R+ TKV +G AVGR++D+T GYD L +L F I+GQL R + W++VY D E D
Sbjct: 984 RTYTKVYKRG-AVGRSIDITRYSGYDELKHDLARRFGIEGQLEDRQRVGWKLVYVDHEND 1042
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++LVGDDPW EF N V+ I I S Q+V++MS
Sbjct: 1043 VLLVGDDPWEEFVNCVRCIKILSPQEVQQMS 1073
>gi|224129718|ref|XP_002320654.1| predicted protein [Populus trichocarpa]
gi|222861427|gb|EEE98969.1| predicted protein [Populus trichocarpa]
Length = 331
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 130/261 (49%), Positives = 196/261 (75%), Gaps = 4/261 (1%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
+EQ+ A N++ +P++ LP KILC+VV++ L AE +TDEV+A ITLLP +E ++
Sbjct: 31 LEQVAAFLNEDSKTAMPIYDLPYKILCKVVHVQLKAEAKTDEVFAHITLLPVAEGDELSS 90
Query: 61 PDPCPAD--SPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
+ + +V SF+K LT SDTST GGFSV ++HA E LPPLD +Q P QEL+A
Sbjct: 91 NKDGESLLLHRKTRVLSFTKKLTPSDTSTQGGFSVPKRHAEESLPPLDKSQQPPAQELLA 150
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
KDLHG EWRF+HI+RGQP+RHLLT GWSTF++SKR+VAGD+F+FLRGE+GEL VGVR
Sbjct: 151 KDLHGSEWRFRHIYRGQPKRHLLTGGWSTFISSKRVVAGDSFIFLRGESGELRVGVRRAM 210
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNN 236
+ ++++ ++V+++ SM LG+L++ASHA++T ++F +++ P TS +FII ++Y+++
Sbjct: 211 KLENNLSANVVTAHSMQLGILSSASHAISTGSIFTIFFHPWTSPAEFIIPFDQYMKSAEI 270
Query: 237 KFAVGMRYKMRFEGEDSPERR 257
++++G R+ M+FEGE+ E+R
Sbjct: 271 EYSIGTRFIMQFEGEECTEQR 291
>gi|356520887|ref|XP_003529091.1| PREDICTED: auxin response factor 25-like [Glycine max]
Length = 1110
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 164/329 (49%), Positives = 224/329 (68%), Gaps = 8/329 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPS-QNEPT 59
EQ+ AS N++ + +IP + LPSK+LC + N+ L+A+ ETDEVYAQITL P PS +
Sbjct: 53 EQVAASLNKDPHSQIPNYPNLPSKLLCLLHNLTLLADPETDEVYAQITLQPVPSFDKDAL 112
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
S +P+ F K LTASDTSTHGGFSV R+ A + PPLD + P QELVA+
Sbjct: 113 LRSDLALKSSKPQPDFFCKQLTASDTSTHGGFSVPRRAADKIFPPLDYSMQPPAQELVAR 172
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH W F+HI+RGQP+RHLLTTGWS FV+ KRL+AGD+ +F+R E L +G+R R
Sbjct: 173 DLHDTVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLLAGDSVLFIRDEKQHLLLGIRRANR 232
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NN 236
Q +++ SSV+SS SMH+G+LA A+HA A + F V+Y PRT S+F+I L KY ++V ++
Sbjct: 233 QPTNISSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRTSPSEFVIPLAKYYKSVYSH 292
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+ ++GMR++M FE EDS RR+ GT+ G+ D P WK+S+WR+L+V WDE + + R
Sbjct: 293 QPSLGMRFRMMFETEDSGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRSR 352
Query: 296 VSPWEIEPFVASATPNLVQPVLAKNKRPR 324
VS WEIEP A + P ++KRPR
Sbjct: 353 VSLWEIEPVTAPFF--ICPPPFFRSKRPR 379
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 588
R+ TKV +G AVGR++D+T GY+ L +L F I+GQL R + W++VY D E D
Sbjct: 998 RTYTKVYKRG-AVGRSIDITRYSGYEELKKDLARRFGIEGQLEDRQRIGWKLVYVDHESD 1056
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++LVGDDPW EF N V+ I I S Q+V++MS
Sbjct: 1057 VLLVGDDPWEEFVNCVRCIKILSPQEVQQMS 1087
>gi|158563961|sp|Q6Z2W3.2|ARFE_ORYSJ RecName: Full=Auxin response factor 5
Length = 1142
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 155/329 (47%), Positives = 218/329 (66%), Gaps = 8/329 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQN-EPT 59
EQ+ AS ++++ +P + LPSK++C + ++L A+ +TDEVYAQ+TL P + E
Sbjct: 72 EQVAASMQKDVDAHVPSYPNLPSKLICLLHGVNLHADPDTDEVYAQMTLQPVNTYGKEAL 131
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
RP++ F K LTASDTSTHGGFSV R+ A + PPLD + P QEL A+
Sbjct: 132 QISELALKQARPQMEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELQAR 191
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
D+H W F+HI+RGQP+RHLLTTGWS FV+ KRL AGD+ + +R E +L +G+R R
Sbjct: 192 DIHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVIVVRDEKHQLLLGIRRANR 251
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAV-NN 236
Q +++ SSV+SS SMH+GVLA A+HA A + F ++Y PR S +F+I KY +A+ +N
Sbjct: 252 QPTNISSSVLSSDSMHIGVLAAAAHAAANSSPFTIFYNPRASPTEFVIPFAKYQKALYSN 311
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+ ++GMR++M FE E+ RR+ GT+ G+ D P WK+S+WR+L+V WDE A+ R +R
Sbjct: 312 QISLGMRFRMMFETEELGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESAAGERRNR 371
Query: 296 VSPWEIEPFVASATPNLVQPVLAKNKRPR 324
VS WEIEP VA+ QP KRPR
Sbjct: 372 VSIWEIEP-VAAPFFLCPQPFFGV-KRPR 398
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 114/230 (49%), Gaps = 24/230 (10%)
Query: 397 PRVKFSQ-QLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCR 455
P F+Q Q+F++A+ D + P++SG NND LL +TE
Sbjct: 886 PSSNFNQHQMFKDALPDVEMEGVDPSNSGLF-----GINNDNLLG---FPIETEDLLINA 937
Query: 456 LFGIELINHATSSA----PSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQE 511
L ++ NH ++ P +K + ++T S + S G+SD+A +
Sbjct: 938 LDSVKYQNHISTDVENNYPMQKDALQEIST--------SMVSQSFGQSDMAFNSIDSAIN 989
Query: 512 QVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQ 571
K S L R+ TKV +G AVGR++D+ GY+ L L MF I+GQ
Sbjct: 990 DGAFLNKNSWPAAPLLQRMRTFTKVYKRG-AVGRSIDIGRYSGYEELKHALARMFGIEGQ 1048
Query: 572 LHTRTK--WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
L R + W++VY D E D++L+GDDPW EF N V+ I I S Q+V++MS
Sbjct: 1049 LEDRQRIGWKLVYKDHEDDILLLGDDPWEEFVNCVRCIRILSPQEVQQMS 1098
>gi|42409013|dbj|BAD10267.1| putative auxin response factor 7a [Oryza sativa Japonica Group]
Length = 1139
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 155/329 (47%), Positives = 218/329 (66%), Gaps = 8/329 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQN-EPT 59
EQ+ AS ++++ +P + LPSK++C + ++L A+ +TDEVYAQ+TL P + E
Sbjct: 69 EQVAASMQKDVDAHVPSYPNLPSKLICLLHGVNLHADPDTDEVYAQMTLQPVNTYGKEAL 128
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
RP++ F K LTASDTSTHGGFSV R+ A + PPLD + P QEL A+
Sbjct: 129 QISELALKQARPQMEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELQAR 188
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
D+H W F+HI+RGQP+RHLLTTGWS FV+ KRL AGD+ + +R E +L +G+R R
Sbjct: 189 DIHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVIVVRDEKHQLLLGIRRANR 248
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAV-NN 236
Q +++ SSV+SS SMH+GVLA A+HA A + F ++Y PR S +F+I KY +A+ +N
Sbjct: 249 QPTNISSSVLSSDSMHIGVLAAAAHAAANSSPFTIFYNPRASPTEFVIPFAKYQKALYSN 308
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+ ++GMR++M FE E+ RR+ GT+ G+ D P WK+S+WR+L+V WDE A+ R +R
Sbjct: 309 QISLGMRFRMMFETEELGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESAAGERRNR 368
Query: 296 VSPWEIEPFVASATPNLVQPVLAKNKRPR 324
VS WEIEP VA+ QP KRPR
Sbjct: 369 VSIWEIEP-VAAPFFLCPQPFFGV-KRPR 395
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 114/230 (49%), Gaps = 24/230 (10%)
Query: 397 PRVKFSQ-QLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCR 455
P F+Q Q+F++A+ D + P++SG NND LL +TE
Sbjct: 883 PSSNFNQHQMFKDALPDVEMEGVDPSNSGLF-----GINNDNLLG---FPIETEDLLINA 934
Query: 456 LFGIELINHATSSA----PSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQE 511
L ++ NH ++ P +K + ++T S + S G+SD+A +
Sbjct: 935 LDSVKYQNHISTDVENNYPMQKDALQEIST--------SMVSQSFGQSDMAFNSIDSAIN 986
Query: 512 QVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQ 571
K S L R+ TKV +G AVGR++D+ GY+ L L MF I+GQ
Sbjct: 987 DGAFLNKNSWPAAPLLQRMRTFTKVYKRG-AVGRSIDIGRYSGYEELKHALARMFGIEGQ 1045
Query: 572 LHTRTK--WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
L R + W++VY D E D++L+GDDPW EF N V+ I I S Q+V++MS
Sbjct: 1046 LEDRQRIGWKLVYKDHEDDILLLGDDPWEEFVNCVRCIRILSPQEVQQMS 1095
>gi|242082191|ref|XP_002445864.1| hypothetical protein SORBIDRAFT_07g027080 [Sorghum bicolor]
gi|241942214|gb|EES15359.1| hypothetical protein SORBIDRAFT_07g027080 [Sorghum bicolor]
Length = 1095
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 154/333 (46%), Positives = 216/333 (64%), Gaps = 13/333 (3%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPS----QN 56
EQ+ AS ++ + +IP + LPSK++C + ++ ++A+ +TDEVYA++TL P +
Sbjct: 55 EQVAASMRKDADAKIPSYPNLPSKLICILRSVTMLADPDTDEVYARMTLQPVSNVTHCDK 114
Query: 57 EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQEL 116
E RP+ F K LTASDTSTHGGFSV R+ A P LD + P QEL
Sbjct: 115 ETLLASDLALKQTRPQTEFFCKTLTASDTSTHGGFSVPRRAAERIFPHLDFSMQPPAQEL 174
Query: 117 VAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRC 176
A+DLH W F+HI+RGQP+RHLLTTGWS FV+ KRL+AGD+ +F+R +L +G+R
Sbjct: 175 QARDLHDAIWTFRHIYRGQPKRHLLTTGWSLFVSGKRLLAGDSVLFIRDGRQQLLLGIRR 234
Query: 177 LARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV 234
RQ ++ SSV+SS SMH+G+LA A+HA A + F V+Y PR S+F+I KY +AV
Sbjct: 235 ANRQPVNLSSSVLSSDSMHIGILAAAAHAAANNSQFTVFYNPRASPSEFVIPFAKYQKAV 294
Query: 235 -NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITR 292
+N+ ++GMR++M FE E+S RR+ GT+ G+ D P WK+S+WR+++V WDE A R
Sbjct: 295 YSNQLSLGMRFRMMFETEESATRRYMGTITGISDMDPVRWKNSQWRNIQVAWDEAAPTER 354
Query: 293 PDRVSPWEIEPFVASATPNLVQPV-LAKNKRPR 324
RVS WE+EP +A P + P L KRPR
Sbjct: 355 RTRVSLWEVEPVIA---PFFIYPSPLFTAKRPR 384
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 59/90 (65%), Gaps = 3/90 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL--HTRTKWEIVYTDDEGD 588
R+ TKV +G AVGR++D+ GYD L ++ MF I+GQL R W++VY D E D
Sbjct: 977 RTYTKVHKRG-AVGRSIDINRYSGYDELKHDIARMFGIEGQLSDQNRVCWKLVYEDHEKD 1035
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKM 618
++LVGDDPW +F N V+ I I S Q+ ++M
Sbjct: 1036 VLLVGDDPWEDFVNCVRCIRILSPQEERQM 1065
>gi|302190092|dbj|BAJ14105.1| auxin response factor 3 [Juncus prismatocarpus subsp.
leschenaultii]
Length = 550
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 141/318 (44%), Positives = 198/318 (62%), Gaps = 27/318 (8%)
Query: 21 LPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPAD------------- 67
LP + RVV++ LMA+ TDEVYAQ++L+P + + +
Sbjct: 66 LPPHVFSRVVHVTLMADVGTDEVYAQLSLMPLSEEERQSHLNFEEEGDGEEKEREESDKL 125
Query: 68 SPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWR 127
P H F K LTASDTSTHGGFSV R+ A +C PPLD Q PTQELVAKDLHG EWR
Sbjct: 126 GPTKIPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPTQELVAKDLHGTEWR 185
Query: 128 FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSS 187
F+HI+RGQPRRHLLTTGWS+FV K+LV+GD +FLRG++GEL +G+R + +S+ +
Sbjct: 186 FRHIYRGQPRRHLLTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGIRRAVQLKSTNFPA 245
Query: 188 VISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRYK 245
+ +S ++ + A++ +++F + Y PR Q FI+ K++++ N+ ++G R+K
Sbjct: 246 IQNSN------ISNIAQAISKKSLFHICYNPRDGQSEFIVPYWKFMKSFNHPISIGTRFK 299
Query: 246 MRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 304
M FE ED+ ERR++G + G+ D P W SKWR L V+WDE R +RVSPWEIE
Sbjct: 300 MNFESEDASERRYNGLITGISDMDPLRWPGSKWRCLLVRWDENGECIRQNRVSPWEIE-- 357
Query: 305 VASATPNLVQPVLAKNKR 322
T + Q ++A N +
Sbjct: 358 ---LTGTVSQGMMAPNSK 372
>gi|224085812|ref|XP_002307706.1| predicted protein [Populus trichocarpa]
gi|222857155|gb|EEE94702.1| predicted protein [Populus trichocarpa]
Length = 363
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 151/308 (49%), Positives = 203/308 (65%), Gaps = 23/308 (7%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ ST + +IP + LPS++LC+V N+ L A+++TDE+YAQ++L P ++ +
Sbjct: 48 EQVAVSTRRSATSQIPNYPNLPSQLLCQVHNVTLHADKDTDEIYAQMSLQPVNTEKDVF- 106
Query: 61 PDPCPADSPRPKVHS---FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELV 117
P P RP H F K LTASDTSTHGGFSV R+ A + PPLD PTQELV
Sbjct: 107 --PIPDFGLRPSKHPSEFFCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYTMQPPTQELV 164
Query: 118 AKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCL 177
+DLH W F+HI+RGQP+RHLLTTGWS FV SKRL AGD+ +F+R E +L VGVR
Sbjct: 165 VRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFVGSKRLKAGDSVLFIRDEKSQLMVGVRRA 224
Query: 178 ARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV- 234
RQQ+++PSSV+S+ SMH+GVLA A+HA A ++ F ++Y PR S F+I L K+ +AV
Sbjct: 225 NRQQTTLPSSVLSADSMHIGVLAAAAHATANRSPFTIFYNPRACPSDFVIPLIKFRKAVF 284
Query: 235 NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPD 294
+ +VGMR+ M FE E+S +RR+ GT+VG+ D V+WDEP + +
Sbjct: 285 GTQVSVGMRFGMMFETEESGKRRYMGTIVGISDL-------------VEWDEPGCSDKQN 331
Query: 295 RVSPWEIE 302
RVS WEIE
Sbjct: 332 RVSSWEIE 339
>gi|15221978|ref|NP_173356.1| auxin response factor 19 [Arabidopsis thaliana]
gi|46576613|sp|Q8RYC8.2|ARFS_ARATH RecName: Full=Auxin response factor 19; AltName:
Full=Auxin-responsive protein IAA22
gi|37540154|gb|AAG35176.1| ARF11/IAA22 [Arabidopsis thaliana]
gi|49616363|gb|AAT67078.1| ARF19 [Arabidopsis thaliana]
gi|56961712|gb|AAB91321.2| early auxin-induced IAA22 [Arabidopsis thaliana]
gi|225897946|dbj|BAH30305.1| hypothetical protein [Arabidopsis thaliana]
gi|332191698|gb|AEE29819.1| auxin response factor 19 [Arabidopsis thaliana]
Length = 1086
Score = 275 bits (703), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 164/350 (46%), Positives = 220/350 (62%), Gaps = 13/350 (3%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQNEPT 59
EQ+ AS Q+ IP + LPSK++C + ++ L A+ ETDEVYAQ+TL P E
Sbjct: 51 EQVAASM-QKQTDFIPNYPNLPSKLICLLHSVTLHADTETDEVYAQMTLQPVNKYDREAL 109
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
R F K LTASDTSTHGGFSV R+ A + PPLD + P QE+VAK
Sbjct: 110 LASDMGLKLNRQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAK 169
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH W F+HI+RGQP+RHLLTTGWS FV++KRL AGD+ +F+R E +L +G+R R
Sbjct: 170 DLHDTTWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFVRDEKSQLMLGIRRANR 229
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNK 237
Q ++ SSVISS SMH+G+LA A+HA A + F +++ PR S+F++ L KY +A+ +
Sbjct: 230 QTPTLSSSVISSDSMHIGILAAAAHANANSSPFTIFFNPRASPSEFVVPLAKYNKALYAQ 289
Query: 238 FAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRV 296
++GMR++M FE ED RR+ GTV G+ D P WK S+WR+L+V WDE + RP RV
Sbjct: 290 VSLGMRFRMMFETEDCGVRRYMGTVTGISDLDPVRWKGSQWRNLQVGWDESTAGDRPSRV 349
Query: 297 SPWEIEPFVASATP-NLVQPVLAKNKRPRL-SMEVPPLDLPSA--ASAPW 342
S WEIEP + TP + P + K PR M LD+ +A + PW
Sbjct: 350 SIWEIEPVI---TPFYICPPPFFRPKYPRQPGMPDDELDMENAFKRAMPW 396
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 64/91 (70%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 588
R+ TKVQ +G +VGR++D+T GYD L +L MF I+GQL + W++VYTD E D
Sbjct: 958 RTYTKVQKRG-SVGRSIDVTRYSGYDELRHDLARMFGIEGQLEDPLTSDWKLVYTDHEND 1016
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++LVGDDPW EF N V+ I I SS +V++MS
Sbjct: 1017 ILLVGDDPWEEFVNCVQNIKILSSVEVQQMS 1047
>gi|379323238|gb|AFD01318.1| auxin response factor 19-2 [Brassica rapa subsp. pekinensis]
Length = 1049
Score = 274 bits (701), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 164/350 (46%), Positives = 220/350 (62%), Gaps = 13/350 (3%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQNEPT 59
EQ+ AS Q+ IP + LPSK++C + ++ L A+ ETDEVYAQ+TL P E
Sbjct: 51 EQVAASM-QKQTDFIPNYPNLPSKLICLLHSVTLHADTETDEVYAQMTLQPVNKYDREAL 109
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
R F K LTASDTSTHGGFSV R+ A + PPLD + P QE+VAK
Sbjct: 110 LASDMGLKINRQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAK 169
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH W F+HI+RGQP+RHLLTTGWS FV++KRL AGD+ +F+R E +L +G+R R
Sbjct: 170 DLHDTTWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFVRDEKSQLTLGIRRANR 229
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNK 237
Q ++ SSVISS SMH+G+LA A+HA A + F +++ PR S+F++ L KY +A+ +
Sbjct: 230 QTPTLSSSVISSDSMHIGILAAAAHANANSSPFTIFFNPRASPSEFVVPLAKYNKALYAQ 289
Query: 238 FAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRV 296
++GMR++M FE ED RR+ GTV G+ D P WK S+WR+L+V WDE + RP RV
Sbjct: 290 VSLGMRFRMMFETEDCGVRRYMGTVTGISDLDPVRWKGSQWRNLQVGWDESTAGDRPSRV 349
Query: 297 SPWEIEPFVASATP-NLVQPVLAKNKRPRL-SMEVPPLDLPSA--ASAPW 342
S WEIEP + TP + P + K PR M LD+ +A + PW
Sbjct: 350 SIWEIEPVI---TPFYICPPPFFRPKYPRQPGMPDDELDMENAFKRAMPW 396
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 65/91 (71%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTR--TKWEIVYTDDEGD 588
R+ TKVQ +G +VGR++D+T GY+ L ++L MF I+GQL + W++VYTD E D
Sbjct: 921 RTYTKVQKRG-SVGRSIDVTRYSGYEELRNDLARMFGIEGQLEDPQISDWKLVYTDHEND 979
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++LVGDDPW EF N V+ I I SS +V++MS
Sbjct: 980 ILLVGDDPWEEFVNCVQNIKILSSAEVQQMS 1010
>gi|356496641|ref|XP_003517174.1| PREDICTED: auxin response factor 6-like [Glycine max]
Length = 1104
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 161/329 (48%), Positives = 222/329 (67%), Gaps = 8/329 (2%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPS-QNEPT 59
EQ+ AS N++++ +IP + LPSK+LC + + L A+ +TD+VYAQITL P PS +
Sbjct: 38 EQVSASLNRDVHSQIPNYPNLPSKLLCLLHTLTLHADPQTDQVYAQITLQPLPSFDKDAL 97
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
+S +P F K LTASDTSTHGGFSV R+ A + PPLD + P QELVA+
Sbjct: 98 LRSDLALESTKPPPDFFCKQLTASDTSTHGGFSVPRRAAEKIFPPLDYSMQPPAQELVAR 157
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH W+F+HI+RGQP+RHLLTTGWS FV+ KRL AGD+ +F+R E +L +G+R R
Sbjct: 158 DLHDTVWKFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR 217
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NN 236
Q +++ SSV+SS SMH+G+LA A+HA A + F V+Y PR S+F+I L KY ++V ++
Sbjct: 218 QPTNISSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVIPLAKYYKSVYSH 277
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+ ++GMR++M FE EDS RR GTV G+ D P WK+S+WR+L+V WDE + + R
Sbjct: 278 QPSLGMRFRMMFETEDSGTRRHMGTVTGISDLDPVQWKNSQWRNLQVGWDESTAGEKRSR 337
Query: 296 VSPWEIEPFVASATPNLVQPVLAKNKRPR 324
VS WEIEP A + P ++KRPR
Sbjct: 338 VSIWEIEPVTAPFF--ICPPPFFRSKRPR 364
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 588
R+ TKV +G AVGR++D+T GY+ L +L F I+GQL R + W++VY D E D
Sbjct: 992 RTYTKVYKRG-AVGRSIDITRYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHESD 1050
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++L+GDDPW EF N V+ I I S Q+V++MS
Sbjct: 1051 VLLLGDDPWEEFVNCVRCIKILSPQEVQQMS 1081
>gi|379323236|gb|AFD01317.1| auxin response factor 19-1 [Brassica rapa subsp. pekinensis]
Length = 1020
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 158/329 (48%), Positives = 211/329 (64%), Gaps = 10/329 (3%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQNEPT 59
EQ+ AS Q+ IP + LPSK++C + ++ L A+ ETDEVYAQ+TL P E
Sbjct: 51 EQVAASM-QKQTDFIPNYPNLPSKLICLLHSVTLHADTETDEVYAQMTLQPVNKYDREAL 109
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
R F K LTASDTSTHGGFSV R+ A + PPLD + P QE+VAK
Sbjct: 110 LASDMGLKLNRQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAK 169
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH W F+HI+RGQP+RHLLTTGWS FV++KRL+AGD+ +F+R E +L + +R R
Sbjct: 170 DLHDTTWTFRHIYRGQPKRHLLTTGWSVFVSTKRLIAGDSVLFVRDEKSQLTLVIRRANR 229
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNK 237
Q ++ SSVISS SMH+G+LA A+HA A + F +++ PR S+F++ L KY +A+ +
Sbjct: 230 QTPTLSSSVISSDSMHIGILAAAAHANANNSPFTIFFNPRASPSEFVVPLAKYNKALYAQ 289
Query: 238 FAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRV 296
++GMR++M FE ED RR+ GTV GV D P WK S+WR+L+V WDE + RP RV
Sbjct: 290 VSLGMRFRMMFETEDCGVRRYMGTVTGVSDLDPVRWKGSQWRNLQVGWDESTAGDRPSRV 349
Query: 297 SPWEIEPFVASATP-NLVQPVLAKNKRPR 324
S WEIEP + TP + P + K PR
Sbjct: 350 SVWEIEPVI---TPFYICPPPFFRPKYPR 375
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 65/91 (71%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTR--TKWEIVYTDDEGD 588
R+ TKVQ +G +VGR++D+T GYD L ++L MF I+GQL + W++VYTD E D
Sbjct: 892 RTYTKVQKRG-SVGRSIDVTRYSGYDELRNDLARMFGIEGQLEDPRPSDWKLVYTDHEND 950
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++LVGDDPW EF N V+ I I SS +V++MS
Sbjct: 951 ILLVGDDPWEEFVNCVQNIKILSSVEVQQMS 981
>gi|4104929|gb|AAD02218.1| auxin response factor 7 [Arabidopsis thaliana]
Length = 1164
Score = 271 bits (693), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 159/334 (47%), Positives = 216/334 (64%), Gaps = 19/334 (5%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ AS Q+ IP + LPSK++C + N+ L A+ ETDEVYAQ+TL P +
Sbjct: 52 EQVAASM-QKQTDFIPSYPNLPSKLICMLHNVTLNADPETDEVYAQMTLQPVNKYDR--- 107
Query: 61 PDPCPADSPRPKVHS-----FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQE 115
D A K++ F K LTASDTSTHGGFSV R+ A + P LD + P QE
Sbjct: 108 -DALLASDMGLKLNRQPNEFFCKTLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQE 166
Query: 116 LVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR 175
LVAKD+H W F+HI+RGQP+RHLLTTGWS FV++KRL AGD+ +F+R +L +G+R
Sbjct: 167 LVAKDIHDNTWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIR 226
Query: 176 CLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEA 233
RQQ ++ SSVISS SMH+GVLA A+HA A + F ++Y PR ++F++ L KY +A
Sbjct: 227 RANRQQPALSSSVISSDSMHIGVLAAAAHANANNSPFTIFYNPRAAPAEFVVPLAKYTKA 286
Query: 234 VNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITR 292
+ + ++GMR++M FE E+ RR+ GTV G+ D P WK+S+WR+L++ WDE A+ R
Sbjct: 287 MYAQVSLGMRFRMIFETEECGVRRYMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDR 346
Query: 293 PDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLS 326
P RVS W+IEP + TP + P RPR S
Sbjct: 347 PSRVSVWDIEPVL---TPFYICP--PPFFRPRFS 375
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 588
R+ TKVQ +G +VGR++D+ GYD L +L MF I+GQL + W++VY D E D
Sbjct: 1037 RTYTKVQKRG-SVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHEND 1095
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++LVGDDPW EF N V+ I I SS +V++MS
Sbjct: 1096 ILLVGDDPWEEFVNCVQSIKILSSAEVQQMS 1126
>gi|30687949|ref|NP_851047.1| auxin response factor 7 [Arabidopsis thaliana]
gi|46576377|sp|P93022.2|ARFG_ARATH RecName: Full=Auxin response factor 7; AltName:
Full=Auxin-responsive protein IAA21/IAA23/IAA25;
AltName: Full=Protein BIPOSTO; AltName: Full=Protein
NON-PHOTOTROPIC HYPOCOTYL 4; AltName: Full=Protein
TRANSPORT INHIBITOR RESPONSE 5
gi|37540157|gb|AAG35177.1| ARF7 [Arabidopsis thaliana]
gi|49616353|gb|AAT67073.1| ARF7 [Arabidopsis thaliana]
gi|332005502|gb|AED92885.1| auxin response factor 7 [Arabidopsis thaliana]
Length = 1164
Score = 271 bits (693), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 159/334 (47%), Positives = 216/334 (64%), Gaps = 19/334 (5%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ AS Q+ IP + LPSK++C + N+ L A+ ETDEVYAQ+TL P +
Sbjct: 52 EQVAASM-QKQTDFIPSYPNLPSKLICMLHNVTLNADPETDEVYAQMTLQPVNKYDR--- 107
Query: 61 PDPCPADSPRPKVHS-----FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQE 115
D A K++ F K LTASDTSTHGGFSV R+ A + P LD + P QE
Sbjct: 108 -DALLASDMGLKLNRQPNEFFCKTLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQE 166
Query: 116 LVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR 175
LVAKD+H W F+HI+RGQP+RHLLTTGWS FV++KRL AGD+ +F+R +L +G+R
Sbjct: 167 LVAKDIHDNTWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIR 226
Query: 176 CLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEA 233
RQQ ++ SSVISS SMH+GVLA A+HA A + F ++Y PR ++F++ L KY +A
Sbjct: 227 RANRQQPALSSSVISSDSMHIGVLAAAAHANANNSPFTIFYNPRAAPAEFVVPLAKYTKA 286
Query: 234 VNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITR 292
+ + ++GMR++M FE E+ RR+ GTV G+ D P WK+S+WR+L++ WDE A+ R
Sbjct: 287 MYAQVSLGMRFRMIFETEECGVRRYMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDR 346
Query: 293 PDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLS 326
P RVS W+IEP + TP + P RPR S
Sbjct: 347 PSRVSVWDIEPVL---TPFYICP--PPFFRPRFS 375
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 588
R+ TKVQ +G +VGR++D+ GYD L +L MF I+GQL + W++VY D E D
Sbjct: 1037 RTYTKVQKRG-SVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHEND 1095
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++LVGDDPW EF N V+ I I SS +V++MS
Sbjct: 1096 ILLVGDDPWEEFVNCVQSIKILSSAEVQQMS 1126
>gi|326497439|dbj|BAK05809.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1083
Score = 271 bits (692), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 152/333 (45%), Positives = 214/333 (64%), Gaps = 13/333 (3%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPS----QN 56
EQ+ AS ++ + +IP + LPSK++C + ++ + ++ ETDEVYA++TL P +
Sbjct: 51 EQVAASMRKDADAQIPSYPNLPSKLICILHSVTMQSDPETDEVYARMTLQPVSNVTQCDK 110
Query: 57 EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQEL 116
E +P+ F K LTASDTSTHGGFSV R+ A P LD + P QEL
Sbjct: 111 EILLASELALKQNKPQTEFFCKTLTASDTSTHGGFSVPRRAAERIFPRLDFSLQPPAQEL 170
Query: 117 VAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRC 176
A+DLH W F+HIFRGQP+RHLLTTGWS F++ KRL+AGD+ +F+R +L +G+R
Sbjct: 171 QARDLHDTIWTFRHIFRGQPKRHLLTTGWSLFISGKRLIAGDSVLFIRDAKQQLLLGIRR 230
Query: 177 LARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV 234
RQ +++ SSV+SS SMH+GVLA A+HA A + F ++Y PR S+F+I KY +AV
Sbjct: 231 ANRQPTNLSSSVLSSDSMHIGVLAAAAHAAANNSQFTIFYNPRASPSEFVIPFAKYQKAV 290
Query: 235 -NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITR 292
N+ ++GMR++M FE E+S RR+ GT+ G+ D P WK+S+WR+++V WDE A R
Sbjct: 291 YGNQLSLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNIQVAWDEAAPSER 350
Query: 293 PDRVSPWEIEPFVASATPNLVQPV-LAKNKRPR 324
RVS W+IEP +A P + P L KR R
Sbjct: 351 RTRVSLWDIEPVIA---PFFIYPTPLFTAKRAR 380
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 59/90 (65%), Gaps = 3/90 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL--HTRTKWEIVYTDDEGD 588
R+ TKV +G AVGR++D+ GYD L ++ MF I+GQL +R W++VY D E D
Sbjct: 970 RTYTKVHKRG-AVGRSIDMNRYSGYDELKHDIARMFGIEGQLGDQSRVGWKLVYEDHEKD 1028
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKM 618
++LVGDDPW +F N V+ I I S Q+ +M
Sbjct: 1029 VLLVGDDPWEDFLNCVRCIRILSPQEEMQM 1058
>gi|297812257|ref|XP_002874012.1| hypothetical protein ARALYDRAFT_488981 [Arabidopsis lyrata subsp.
lyrata]
gi|297319849|gb|EFH50271.1| hypothetical protein ARALYDRAFT_488981 [Arabidopsis lyrata subsp.
lyrata]
Length = 1168
Score = 271 bits (692), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 161/342 (47%), Positives = 219/342 (64%), Gaps = 20/342 (5%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ AS Q+ IP + LPSK++C + N+ L A+ ETDEVYAQ+TL P +
Sbjct: 52 EQVAASM-QKQTDFIPSYPNLPSKLICMLHNVTLNADPETDEVYAQMTLQPVNKYDR--- 107
Query: 61 PDPCPADSPRPKVHS-----FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQE 115
D A K++ F K LTASDTSTHGGFSV R+ A + P LD + P QE
Sbjct: 108 -DALLASDMGLKLNRQPNEFFCKTLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQE 166
Query: 116 LVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR 175
LVAKD+H W F+HI+RGQP+RHLLTTGWS FV++KRL AGD+ +F+R +L +G+R
Sbjct: 167 LVAKDIHDNTWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIR 226
Query: 176 CLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPR---TSQFIISLNKYLE 232
RQQ ++ SSVISS SMH+GVLA A+HA A + F ++Y PR ++F++ L KY +
Sbjct: 227 RANRQQPALSSSVISSDSMHIGVLAAAAHANANNSPFTIFYNPRWAAPAEFVVPLAKYTK 286
Query: 233 AVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASIT 291
A+ + ++GMR++M FE E+ RR+ GTV G+ D P WK+S+WR+L++ WDE A+
Sbjct: 287 AMYAQVSLGMRFRMIFETEECGVRRYMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGD 346
Query: 292 RPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLD 333
RP RVS W+IEP + TP + P RPR S + LD
Sbjct: 347 RPSRVSVWDIEPVL---TPFYICP--PPFFRPRFSGQPGMLD 383
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 588
R+ TKVQ +G +VGR++D+ GYD L +L MF I+GQL + W++VY D E D
Sbjct: 1041 RTYTKVQERG-SVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHETD 1099
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++LVGDDPW EF N V+ + I SS +V++MS
Sbjct: 1100 ILLVGDDPWEEFVNFVQSLKILSSAEVQQMS 1130
>gi|379323208|gb|AFD01303.1| auxin response factor 7-1 [Brassica rapa subsp. pekinensis]
Length = 1474
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 149/303 (49%), Positives = 203/303 (66%), Gaps = 15/303 (4%)
Query: 21 LPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHS----- 75
LPSK++C + N+ L A+ ET+EVYAQ+TL P + D A K++
Sbjct: 354 LPSKLICMLQNVTLNADPETEEVYAQMTLQPVNKYDR----DALLASDMGLKINRQPNEF 409
Query: 76 FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQ 135
F K LTASDTSTHGGFSV R+ A + P LD + P QELVAKD+H W F+HIFRGQ
Sbjct: 410 FCKTLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIFRGQ 469
Query: 136 PRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMH 195
P+RHLLTTGWS FV++KRL AGD+ +F+R G+L +G+R RQQ ++ SSVISS SMH
Sbjct: 470 PKRHLLTTGWSVFVSTKRLFAGDSVLFVRDGKGQLLLGIRRANRQQPALSSSVISSDSMH 529
Query: 196 LGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDS 253
+GVLA A+HA A + F ++Y PR ++F++ L KY +A+ + ++GMR++M FE E+
Sbjct: 530 IGVLAAAAHANANNSPFTIFYNPRAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEEC 589
Query: 254 PERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL 312
RR+ GTV G+ D P WK+S+WR+L++ WDE A+ RP RVS W+IEP + TP
Sbjct: 590 GVRRYMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVL---TPFY 646
Query: 313 VQP 315
+ P
Sbjct: 647 ICP 649
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 93/187 (49%), Positives = 132/187 (70%), Gaps = 6/187 (3%)
Query: 132 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISS 191
F GQP+RHLLTTGWS FV++KRL AGD+ +F+R G+L +G+R RQQ ++ SSVISS
Sbjct: 114 FLGQPKRHLLTTGWSVFVSTKRLFAGDSVLFVRDGKGQLLLGIRRANRQQPALSSSVISS 173
Query: 192 QSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFE 249
SMH+GVLA A+HA A + F ++Y PR ++F++ L KY +A+ + ++GMR++M FE
Sbjct: 174 DSMHIGVLAAAAHANANNSPFTIFYNPRAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFE 233
Query: 250 GEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASA 308
E+ RR+ GTV G+ D P WK+S+WR+L++ WDE A+ RP RVS W+IEP +
Sbjct: 234 TEECGVRRYMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVL--- 290
Query: 309 TPNLVQP 315
TP + P
Sbjct: 291 TPFYICP 297
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 588
R+ TKVQ +G +VGR++D+ GYD L +L MF I+GQL + W++VY D E D
Sbjct: 1347 RTYTKVQKRG-SVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPLTSDWKLVYVDHEND 1405
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++LVGDDPW EF N V+ I I SS +V++MS
Sbjct: 1406 ILLVGDDPWEEFVNCVQSIKILSSAEVQQMS 1436
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP 51
EQ+ AS Q+ IP + LPSK++C + N+ L A+ ET+EVYAQ+TL P
Sbjct: 52 EQVAASM-QKQTDFIPSYPNLPSKLICMLQNVTLNADPETEEVYAQMTLQP 101
>gi|357138654|ref|XP_003570905.1| PREDICTED: auxin response factor 5-like [Brachypodium distachyon]
Length = 1141
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 148/311 (47%), Positives = 207/311 (66%), Gaps = 6/311 (1%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQNEPT 59
EQ+ AS +++ ++P + LPSK++C + ++ L A+ +TDEVYAQ+TL P E
Sbjct: 61 EQVAASMQKDVEAQVPNYPNLPSKLICLLHSVILQADPDTDEVYAQMTLQPVNTYAKEAL 120
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
RP++ F K LTASDTSTHGGFSV R+ A + P LD + P QEL A+
Sbjct: 121 QLSELALRQARPQMEFFCKTLTASDTSTHGGFSVPRRAAEKIFPSLDFSLQPPCQELQAR 180
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
D+H W F+HIFRGQP+RHLLTTGWS FV+ K+L AGD+ +F+R E +L +G+R R
Sbjct: 181 DIHDNIWTFRHIFRGQPKRHLLTTGWSLFVSGKKLFAGDSVIFVRDEKHQLLLGIRRANR 240
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAV-NN 236
Q +++ SSV+SS SMH+GVLA A+HA A + F ++Y PR S +F+I KY +A+ +N
Sbjct: 241 QPTNISSSVLSSDSMHIGVLAAAAHAAANSSPFTIFYNPRASPTEFVIPFAKYQKAMYSN 300
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+ ++GMR++M E E+ RR+ GT+ G+ D P WK S+WRSL+V WDE A+ R +R
Sbjct: 301 QISLGMRFRMTCETEELGTRRYMGTITGISDLDPVRWKSSQWRSLQVGWDESAAGERRNR 360
Query: 296 VSPWEIEPFVA 306
VS WEIEP A
Sbjct: 361 VSIWEIEPLAA 371
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 588
R+ TKV +G AVGR++D+ GY L L MF I+GQL R + W++VYTD E D
Sbjct: 1008 RTFTKVYKRG-AVGRSIDIGKYSGYGELNQALARMFGIEGQLEDRQRIGWKLVYTDHEDD 1066
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++L+GDDPW EF N V+ I I S Q+V++MS
Sbjct: 1067 VLLLGDDPWEEFVNCVRCIRILSPQEVQQMS 1097
>gi|8778678|gb|AAF79686.1|AC022314_27 F9C16.11 [Arabidopsis thaliana]
Length = 330
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 150/342 (43%), Positives = 198/342 (57%), Gaps = 77/342 (22%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPE-------- 52
+E +EAST +ELN+ P LPSK+ CRV+ IHL E +DE Y +ITL+P+
Sbjct: 31 IELVEASTREELNELQPNCDLPSKLQCRVIAIHLKVENNSDETYVEITLMPDTTVSKNLQ 90
Query: 53 ---PSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPL---- 105
P++NE + RP V+SF+KVLTASDTS G FSV KHA ECLPPL
Sbjct: 91 VVIPTENE---------NQFRPIVNSFTKVLTASDTSAQGEFSVPCKHAIECLPPLLFYF 141
Query: 106 -DMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLR 164
DM+Q P QEL+A DLHG +WRFKH +RG D VF R
Sbjct: 142 IDMSQPIPAQELIAIDLHGNQWRFKHSYRG-----------------------DVIVFAR 178
Query: 165 GENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFI 224
+ +SM GV+A+A HA Q MF++ YKPR+SQ+I
Sbjct: 179 ------------------------YNIESMRHGVIASAKHAFDNQCMFIMVYKPRSSQYI 214
Query: 225 ISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQW 284
+S K+L+AVNNKF VG +Y MRFE +D E R+ GT++G+ DFSPHWK S+WRSL+VQW
Sbjct: 215 VSHEKFLDAVNNKFNVGSKYTMRFEDDDLSETRYFGTIIGISDFSPHWKCSEWRSLEVQW 274
Query: 285 DEPASITRPDRVSPWEIEPFVASAT-----PNLVQPVLAKNK 321
DE AS RP +VSPW+I+ ++S+ N+V+ + +K
Sbjct: 275 DEFASFPRPKKVSPWDIKHLMSSSNVPRELCNMVKKIFIYSK 316
>gi|300373052|gb|ADG43135.1| auxin response factor 1 [Zea mays]
Length = 1085
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 153/333 (45%), Positives = 215/333 (64%), Gaps = 13/333 (3%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPS----QN 56
EQ+ AS ++ + +IP + L SK++C + ++ ++A+ +TDEVYA++TL P +
Sbjct: 52 EQVAASMRKDADAKIPSYPNLSSKLICILRSVTMLADPDTDEVYARMTLQPVSNVTHCDK 111
Query: 57 EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQEL 116
E RP+ F K LTASDTSTHGGFSV R+ A P LD + P QEL
Sbjct: 112 ETLLATELALKQTRPQTEFFCKTLTASDTSTHGGFSVPRRAAERIFPHLDFSVQPPAQEL 171
Query: 117 VAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRC 176
A+DLH W F+HI+RGQP+RHLLTTGWS FV+ KRL+AGD+ +F+R +L +G+R
Sbjct: 172 QARDLHDAIWTFRHIYRGQPKRHLLTTGWSLFVSGKRLLAGDSVLFIRDGRQQLLLGIRR 231
Query: 177 LARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV 234
RQ ++ SSV+SS SMH+G+LA A+HA A + F V+Y PR S+F+I KY +AV
Sbjct: 232 ANRQPVNLSSSVLSSDSMHIGILAAAAHAAANNSQFTVFYNPRASPSEFVIPFAKYQKAV 291
Query: 235 -NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITR 292
+N+ ++GMR++M FE E+S RR+ GT+ G+ D P WK+S+WR+++V WDE A R
Sbjct: 292 YSNQLSLGMRFRMMFETEESATRRYMGTITGISDMDPLRWKNSQWRNIQVAWDEAAPSER 351
Query: 293 PDRVSPWEIEPFVASATPNLVQPV-LAKNKRPR 324
RVS WE+EP +A P + P L KRPR
Sbjct: 352 RTRVSLWEVEPVIA---PFFIYPSPLFTAKRPR 381
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 71/124 (57%), Gaps = 3/124 (2%)
Query: 497 GKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYD 556
G +DIA + +Q + S++ R+ TKV +G AVGR++D+ GYD
Sbjct: 933 GVADIAFNSIDSSINDIQFLNRNSRAPGPVQQRMRTYTKVHKRG-AVGRSIDINRYSGYD 991
Query: 557 HLIDELEEMFDIKGQL--HTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 614
L ++ MF I+GQL R W++VY D E D++LVGDDPW +F N V+ I I S Q+
Sbjct: 992 ELKHDVARMFGIEGQLSDQNRVGWKLVYEDHEKDVLLVGDDPWEDFVNCVRCIRILSPQE 1051
Query: 615 VKKM 618
++M
Sbjct: 1052 ERQM 1055
>gi|30687957|ref|NP_568400.2| auxin response factor 7 [Arabidopsis thaliana]
gi|332005503|gb|AED92886.1| auxin response factor 7 [Arabidopsis thaliana]
Length = 1150
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 159/335 (47%), Positives = 216/335 (64%), Gaps = 20/335 (5%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ AS Q+ IP + LPSK++C + N+ L A+ ETDEVYAQ+TL P +
Sbjct: 52 EQVAASM-QKQTDFIPSYPNLPSKLICMLHNVTLNADPETDEVYAQMTLQPVNKYDR--- 107
Query: 61 PDPCPADSPRPKVHS-----FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQE 115
D A K++ F K LTASDTSTHGGFSV R+ A + P LD + P QE
Sbjct: 108 -DALLASDMGLKLNRQPNEFFCKTLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQE 166
Query: 116 LVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR 175
LVAKD+H W F+HI+RGQP+RHLLTTGWS FV++KRL AGD+ +F+R +L +G+R
Sbjct: 167 LVAKDIHDNTWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIR 226
Query: 176 CLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPR---TSQFIISLNKYLE 232
RQQ ++ SSVISS SMH+GVLA A+HA A + F ++Y PR ++F++ L KY +
Sbjct: 227 RANRQQPALSSSVISSDSMHIGVLAAAAHANANNSPFTIFYNPRWAAPAEFVVPLAKYTK 286
Query: 233 AVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASIT 291
A+ + ++GMR++M FE E+ RR+ GTV G+ D P WK+S+WR+L++ WDE A+
Sbjct: 287 AMYAQVSLGMRFRMIFETEECGVRRYMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGD 346
Query: 292 RPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLS 326
RP RVS W+IEP + TP + P RPR S
Sbjct: 347 RPSRVSVWDIEPVL---TPFYICP--PPFFRPRFS 376
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 588
R+ TKVQ +G +VGR++D+ GYD L +L MF I+GQL + W++VY D E D
Sbjct: 1038 RTYTKVQKRG-SVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHEND 1096
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++LVGDDPW EF N V+ I I SS +V++MS
Sbjct: 1097 ILLVGDDPWEEFVNCVQSIKILSSAEVQQMS 1127
>gi|30687943|ref|NP_851046.1| auxin response factor 7 [Arabidopsis thaliana]
gi|8071650|gb|AAF71831.1|AF186466_1 non-phototropic hypocotyl 4 [Arabidopsis thaliana]
gi|332005501|gb|AED92884.1| auxin response factor 7 [Arabidopsis thaliana]
Length = 1165
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 159/335 (47%), Positives = 216/335 (64%), Gaps = 20/335 (5%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ AS Q+ IP + LPSK++C + N+ L A+ ETDEVYAQ+TL P +
Sbjct: 52 EQVAASM-QKQTDFIPSYPNLPSKLICMLHNVTLNADPETDEVYAQMTLQPVNKYDR--- 107
Query: 61 PDPCPADSPRPKVHS-----FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQE 115
D A K++ F K LTASDTSTHGGFSV R+ A + P LD + P QE
Sbjct: 108 -DALLASDMGLKLNRQPNEFFCKTLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQE 166
Query: 116 LVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR 175
LVAKD+H W F+HI+RGQP+RHLLTTGWS FV++KRL AGD+ +F+R +L +G+R
Sbjct: 167 LVAKDIHDNTWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIR 226
Query: 176 CLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPR---TSQFIISLNKYLE 232
RQQ ++ SSVISS SMH+GVLA A+HA A + F ++Y PR ++F++ L KY +
Sbjct: 227 RANRQQPALSSSVISSDSMHIGVLAAAAHANANNSPFTIFYNPRWAAPAEFVVPLAKYTK 286
Query: 233 AVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASIT 291
A+ + ++GMR++M FE E+ RR+ GTV G+ D P WK+S+WR+L++ WDE A+
Sbjct: 287 AMYAQVSLGMRFRMIFETEECGVRRYMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGD 346
Query: 292 RPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLS 326
RP RVS W+IEP + TP + P RPR S
Sbjct: 347 RPSRVSVWDIEPVL---TPFYICP--PPFFRPRFS 376
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 588
R+ TKVQ +G +VGR++D+ GYD L +L MF I+GQL + W++VY D E D
Sbjct: 1038 RTYTKVQKRG-SVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHEND 1096
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++LVGDDPW EF N V+ I I SS +V++MS
Sbjct: 1097 ILLVGDDPWEEFVNCVQSIKILSSAEVQQMS 1127
>gi|414869517|tpg|DAA48074.1| TPA: hypothetical protein ZEAMMB73_725019 [Zea mays]
Length = 1086
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 153/333 (45%), Positives = 215/333 (64%), Gaps = 13/333 (3%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPS----QN 56
EQ+ AS ++ + +IP + L SK++C + ++ ++A+ +TDEVYA++TL P +
Sbjct: 52 EQVAASMRKDADAKIPSYPNLSSKLICILRSVTMLADPDTDEVYARMTLQPVSNVTHCDK 111
Query: 57 EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQEL 116
E RP+ F K LTASDTSTHGGFSV R+ A P LD + P QEL
Sbjct: 112 ETLLATELALKQTRPQTEFFCKTLTASDTSTHGGFSVPRRAAERIFPHLDFSVQPPAQEL 171
Query: 117 VAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRC 176
A+DLH W F+HI+RGQP+RHLLTTGWS FV+ KRL+AGD+ +F+R +L +G+R
Sbjct: 172 QARDLHDAIWTFRHIYRGQPKRHLLTTGWSLFVSGKRLLAGDSVLFIRDGRQQLLLGIRR 231
Query: 177 LARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV 234
RQ ++ SSV+SS SMH+G+LA A+HA A + F V+Y PR S+F+I KY +AV
Sbjct: 232 ANRQPVNLSSSVLSSDSMHIGILAAAAHAAANNSQFTVFYNPRASPSEFVIPFAKYQKAV 291
Query: 235 -NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITR 292
+N+ ++GMR++M FE E+S RR+ GT+ G+ D P WK+S+WR+++V WDE A R
Sbjct: 292 YSNQLSLGMRFRMMFETEESATRRYMGTITGISDMDPLRWKNSQWRNIQVAWDEAAPSER 351
Query: 293 PDRVSPWEIEPFVASATPNLVQPV-LAKNKRPR 324
RVS WE+EP +A P + P L KRPR
Sbjct: 352 RTRVSLWEVEPVIA---PFFIYPSPLFTAKRPR 381
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 71/124 (57%), Gaps = 3/124 (2%)
Query: 497 GKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYD 556
G +DIA + +Q + S++ R+ TKV +G AVGR++D+ GYD
Sbjct: 934 GVADIAFNSIDSSINDIQFLNRNSRAPGPVQQRMRTYTKVHKRG-AVGRSIDINRYSGYD 992
Query: 557 HLIDELEEMFDIKGQL--HTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 614
L ++ MF I+GQL R W++VY D E D++LVGDDPW +F N V+ I I S Q+
Sbjct: 993 ELKHDVARMFGIEGQLSDQNRVGWKLVYEDHEKDVLLVGDDPWEDFVNCVRCIRILSPQE 1052
Query: 615 VKKM 618
++M
Sbjct: 1053 ERQM 1056
>gi|379323210|gb|AFD01304.1| auxin response factor 7-2 [Brassica rapa subsp. pekinensis]
Length = 1100
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 155/323 (47%), Positives = 211/323 (65%), Gaps = 17/323 (5%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ AS Q+ IP + LPSK++C + N+ L A+ ETDEVYAQ+TL P +
Sbjct: 52 EQVAASM-QKQTDFIPSYPNLPSKLICMLQNVTLNADPETDEVYAQMTLQPVNKYDR--- 107
Query: 61 PDPCPADSPRPKVHS-----FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQE 115
D A K++ F K LTASDTSTHGGFSV R+ A + P LD + P QE
Sbjct: 108 -DALLASDMGLKLNRQPNEFFCKTLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQE 166
Query: 116 LVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR 175
LVAKD+H W F+HI+RGQP+RHLLTTGWS FV++KRL AGD+ +F+R +L +G+R
Sbjct: 167 LVAKDIHDNTWTFRHIYRGQPKRHLLTTGWSVFVSNKRLFAGDSVLFIRDGKAQLLLGIR 226
Query: 176 CLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEA 233
RQQ ++ SSVISS SMH+GVLA A+HA A + F ++Y PR ++F++ L KY +A
Sbjct: 227 RANRQQPALSSSVISSDSMHIGVLAAAAHANANNSPFTIFYNPRAAPAEFVVPLAKYTKA 286
Query: 234 VNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITR 292
+ + ++GMR++M FE E+ RR+ GTV G+ D P WK S+WR+L++ WDE A+ R
Sbjct: 287 MYAQVSLGMRFRMIFETEECGVRRYMGTVTGISDLDPVRWKSSQWRNLQIGWDESAAGDR 346
Query: 293 PDRVSPWEIEPFVASATPNLVQP 315
P RVS W+IEP + TP + P
Sbjct: 347 PSRVSVWDIEPVL---TPFYICP 366
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 588
R+ TKVQ +G +VGR++D+ GYD L +L MF I+GQL + W++VY D E D
Sbjct: 973 RTYTKVQKRG-SVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHEND 1031
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++LVGDDPW EF N V+ I I SS +V++MS
Sbjct: 1032 ILLVGDDPWEEFVNCVQSIKILSSAEVQQMS 1062
>gi|224142772|ref|XP_002324725.1| predicted protein [Populus trichocarpa]
gi|222866159|gb|EEF03290.1| predicted protein [Populus trichocarpa]
Length = 1047
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 146/308 (47%), Positives = 201/308 (65%), Gaps = 4/308 (1%)
Query: 2 EQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQN-EPTT 60
EQ+ AS +E + L SK++C + N+ L A+ ETDEVYAQ+TL P + E
Sbjct: 51 EQVAASMQKETDFVPSYPNLTSKLICMLHNVTLHADVETDEVYAQMTLQPVSKYDKEALL 110
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
R F K LTASDTSTHGGF V R+ A + PPLD + P QELVA+D
Sbjct: 111 ASDLGQKQSRQPTEFFCKTLTASDTSTHGGFFVPRRAAEKIFPPLDFSMQPPAQELVARD 170
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
LH W F+HI+RGQP+RHLLTTGWS FV++KR+ GD+ +F+R E +L +G+R RQ
Sbjct: 171 LHDNTWTFRHIYRGQPKRHLLTTGWSVFVSTKRIFTGDSVLFIRDEKSQLLLGIRHANRQ 230
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKF 238
Q ++ SS+ISS SMH+G+LA A+HA A + F ++Y P S+F+I +KY +A+ +
Sbjct: 231 QPALSSSLISSDSMHIGILAAAAHAAANNSPFTIFYNPSASPSEFVIPFSKYNKAMYTQG 290
Query: 239 AVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVS 297
++GMR++M F E+S RR+ GT+ G+ D P WK+S+WR+L+V WDE + RP+RVS
Sbjct: 291 SLGMRFRMMFTTEESGVRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTASERPNRVS 350
Query: 298 PWEIEPFV 305
WEIEP V
Sbjct: 351 IWEIEPVV 358
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 82/139 (58%), Gaps = 8/139 (5%)
Query: 486 ISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSN---RSRTKVQMQGVA 542
+ST + +A S G S+I FK + ++ + + N R+ TKVQ +G +
Sbjct: 885 LSTAAISAQSFGVSNIP--FKPDGSNDIAINDTGILNNGAWTNQNQRMRTYTKVQKRG-S 941
Query: 543 VGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEF 600
VGR++D+T GYD L +L MF I+GQL + W++VY D E D++LVGDDPW EF
Sbjct: 942 VGRSIDITCYKGYDELRHDLARMFGIEGQLEDPQSSDWKLVYVDRENDILLVGDDPWEEF 1001
Query: 601 CNMVKRIFICSSQDVKKMS 619
+ V+ I I SS +V++MS
Sbjct: 1002 MSCVQSIKILSSAEVQQMS 1020
>gi|4103243|gb|AAD04807.1| BIPOSTO [Arabidopsis thaliana]
Length = 1165
Score = 268 bits (686), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 157/332 (47%), Positives = 216/332 (65%), Gaps = 14/332 (4%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP--EPSQNEP 58
EQ+ AS Q+ IP + LPSK++C + N+ L A+ ETDEVYAQ+TL P + +N
Sbjct: 52 EQVAASM-QKQTDFIPSYPNLPSKLICMLHNVTLNADPETDEVYAQMTLQPVNKYDRNAL 110
Query: 59 TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
D + +P F K LTASDTSTHGGFSV R+ A + P LD + P QELVA
Sbjct: 111 LASDMGLKLNRQPN-EFFCKTLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVA 169
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
KD+H W F+HI+RGQP+RHLLTTGWS FV++KR AGD+ +F+R +L +G+R
Sbjct: 170 KDIHDNTWTFRHIYRGQPKRHLLTTGWSVFVSTKRFFAGDSVLFIRDGKAQLLLGIRRAN 229
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPR---TSQFIISLNKYLEAVN 235
RQQ ++ SSVISS SMH+GVLA A+HA A + F ++Y PR ++F++ L KY +A+
Sbjct: 230 RQQPALSSSVISSDSMHIGVLAAAAHANANNSPFTIFYNPRWAAPAEFVVPLAKYTKAMY 289
Query: 236 NKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPD 294
+ ++GMR++M FE E+ RR+ GTV G+ D P W++S+WR+L++ WDE A+ RP
Sbjct: 290 AQVSLGMRFRMIFETEECGVRRYMGTVTGISDLDPVRWENSQWRNLQIGWDESAAGDRPS 349
Query: 295 RVSPWEIEPFVASATPNLVQPVLAKNKRPRLS 326
RVS W+IEP + TP + P RPR S
Sbjct: 350 RVSVWDIEPVL---TPFYICP--PPFFRPRFS 376
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 588
R+ TKVQ +G +VGR++D+ GYD L +L MF I+GQL + W++VY D E D
Sbjct: 1038 RTYTKVQKRG-SVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHEND 1096
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++LVGDDPW EF N V+ I I SS +V++MS
Sbjct: 1097 ILLVGDDPWEEFVNCVQSIKILSSAEVQQMS 1127
>gi|223973083|gb|ACN30729.1| unknown [Zea mays]
Length = 680
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 138/328 (42%), Positives = 203/328 (61%), Gaps = 17/328 (5%)
Query: 20 RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPA-------DSPRPK 72
R+P ++CRVV++ L A+ TDEVYA++ L+ + D D K
Sbjct: 64 RVPPHVVCRVVDVELRADAATDEVYARLALVAMDTMFGRNINDGETEEKNGEEEDGDGEK 123
Query: 73 VHS---FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFK 129
H+ F K LTASDTSTHGGFSV R+ A +C PPLD Q P+QEL+AKDLHG +WRF+
Sbjct: 124 KHASHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYEQLRPSQELIAKDLHGMKWRFR 183
Query: 130 HIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVI 189
HI+RGQPRRHLLTTGWS+F+ K+LV+GD +FLRG +GEL +GVR + ++ +
Sbjct: 184 HIYRGQPRRHLLTTGWSSFINKKKLVSGDAVLFLRGNDGELRLGVRRAVQLKNEALLEAV 243
Query: 190 SSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMR 247
+ L +L+ ++++ +++F + + PR S+FI+ K+L+++N F+VG R+K+
Sbjct: 244 NCTDSKLLMLSAVANSLDNRSIFHICFNPRVGASEFIVPYCKFLKSLNYPFSVGTRFKVG 303
Query: 248 FEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA 306
E ED+ ER F G ++G+ + P HW SKW+SL ++WD + +RVSPW+IE +
Sbjct: 304 CENEDANERSF-GLIIGISEVDPIHWPGSKWKSLLIKWDGATKYSHQNRVSPWDIEGVGS 362
Query: 307 SATPNLVQPVLAKNKRPRLSMEVPPLDL 334
S LV L+ + R + PP DL
Sbjct: 363 SV---LVTHRLSSSVSKRTKLCFPPSDL 387
>gi|224030497|gb|ACN34324.1| unknown [Zea mays]
gi|407232698|gb|AFT82691.1| ARF23 ARF type transcription factor, partial [Zea mays subsp. mays]
gi|413946059|gb|AFW78708.1| auxin response factor 4 [Zea mays]
Length = 680
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 137/328 (41%), Positives = 203/328 (61%), Gaps = 17/328 (5%)
Query: 20 RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPA-------DSPRPK 72
R+P ++CRVV++ L A+ TDEVYA++ L+ + D D K
Sbjct: 64 RVPPHVVCRVVDVELRADAATDEVYARLALVAMDTMFGRNINDGETEEKNGEEEDGDGEK 123
Query: 73 VHS---FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFK 129
H+ F K LTASDTSTHGGFSV R+ A +C PPLD Q P+QEL+AKDLHG +WRF+
Sbjct: 124 KHASHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYEQLRPSQELIAKDLHGMKWRFR 183
Query: 130 HIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVI 189
HI+RGQPRRHLLTTGWS+F+ K+LV+GD +FLRG +GEL +GVR + ++ +
Sbjct: 184 HIYRGQPRRHLLTTGWSSFINKKKLVSGDAVLFLRGNDGELRLGVRRAVQLKNEALLEAV 243
Query: 190 SSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMR 247
+ L +L+ ++++ +++F + + PR S+FI+ K+L+++N F+VG R+K+
Sbjct: 244 NCTDSKLLMLSAVANSLDNRSIFHICFNPRVGASEFIVPYCKFLKSLNYHFSVGTRFKVG 303
Query: 248 FEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA 306
E ED+ ER F G ++G+ + P HW SKW+SL ++WD + +RVSPW+IE +
Sbjct: 304 CENEDANERSF-GLIIGISEVDPIHWPGSKWKSLLIKWDGATKYSHQNRVSPWDIEGVGS 362
Query: 307 SATPNLVQPVLAKNKRPRLSMEVPPLDL 334
S + V L+ + R + PP DL
Sbjct: 363 SVS---VTHRLSSSVSKRTKLCFPPSDL 387
>gi|301069326|ref|NP_001130681.2| auxin response factor 23 [Zea mays]
gi|295844320|gb|ADG43157.1| auxin response factor 23 [Zea mays]
Length = 680
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 137/328 (41%), Positives = 203/328 (61%), Gaps = 17/328 (5%)
Query: 20 RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPA-------DSPRPK 72
R+P ++CRVV++ L A+ TDEVYA++ L+ + D D K
Sbjct: 64 RVPPHVVCRVVDVELRADAATDEVYARLALVAMDTMFGRNINDGETEEKNGEEEDGDGEK 123
Query: 73 VHS---FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFK 129
H+ F K LTASDTSTHGGFSV R+ A +C PPLD Q P+QEL+AKDLHG +WRF+
Sbjct: 124 KHASHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYEQLRPSQELIAKDLHGMKWRFR 183
Query: 130 HIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVI 189
HI+RGQPRRHLLTTGWS+F+ K+LV+GD +FLRG +GEL +GVR + ++ +
Sbjct: 184 HIYRGQPRRHLLTTGWSSFINKKKLVSGDAVLFLRGNDGELRLGVRRAVQLKNEALLEAV 243
Query: 190 SSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMR 247
+ L +L+ ++++ +++F + + PR S+FI+ K+L+++N F+VG R+K+
Sbjct: 244 NCTDSKLLMLSAVANSLDNRSIFHICFNPRVGASEFIVPYCKFLKSLNYHFSVGTRFKVG 303
Query: 248 FEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA 306
E ED+ ER F G ++G+ + P HW SKW+SL ++WD + +RVSPW+IE +
Sbjct: 304 CENEDANERSF-GLIIGISEVDPIHWPGSKWKSLLIKWDGATKYSHQNRVSPWDIEGVGS 362
Query: 307 SATPNLVQPVLAKNKRPRLSMEVPPLDL 334
S + V L+ + R + PP DL
Sbjct: 363 SVS---VTHRLSSSVSKRTKLCFPPSDL 387
>gi|297850306|ref|XP_002893034.1| hypothetical protein ARALYDRAFT_335174 [Arabidopsis lyrata subsp.
lyrata]
gi|297338876|gb|EFH69293.1| hypothetical protein ARALYDRAFT_335174 [Arabidopsis lyrata subsp.
lyrata]
Length = 1096
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 165/364 (45%), Positives = 220/364 (60%), Gaps = 27/364 (7%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQNEPT 59
EQ+ AS Q+ IP + LPSK++C + ++ L A+ ETDEVYAQ+TL P E
Sbjct: 51 EQVAASM-QKQTDFIPNYPNLPSKLICLLHSVTLHADTETDEVYAQMTLQPVNKYDREAL 109
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
R F K LTASDTSTHGGFSV R+ A + PPLD + P QE+VAK
Sbjct: 110 LASDMGLKLNRQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAK 169
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFL--------------RG 165
DLH W F+HI+RGQP+RHLLTTGWS FV++KRL AGD+ +F+ R
Sbjct: 170 DLHDTTWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFVRIGLSSSHKGTWVCRD 229
Query: 166 ENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQF 223
E +L +G+R RQ ++ SSVISS SMH+G+LA A+HA A + F +++ PR S+F
Sbjct: 230 EKSQLMLGIRRANRQTPTLSSSVISSDSMHIGILAAAAHANANSSPFTIFFNPRASPSEF 289
Query: 224 IISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKV 282
I+ L KY +A+ + ++GMR++M FE ED RR+ GTV G+ D P WK S+WR+L+V
Sbjct: 290 IVPLAKYNKALYAQVSLGMRFRMMFETEDCGVRRYMGTVTGISDLDPVRWKGSQWRNLQV 349
Query: 283 QWDEPASITRPDRVSPWEIEPFVASATP-NLVQPVLAKNKRPRL-SMEVPPLDLPSA--A 338
WDE + RP RVS WEIEP + TP + P + K PR M LD+ +A
Sbjct: 350 GWDESTAGDRPSRVSIWEIEPVI---TPFYICPPPFFRPKYPRQPGMPDDELDMENAFKR 406
Query: 339 SAPW 342
+ PW
Sbjct: 407 AMPW 410
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 64/91 (70%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 588
R+ TKVQ +G +VGR++D+T GYD L +L MF I+GQL + W++VYTD E D
Sbjct: 968 RTYTKVQKRG-SVGRSIDVTRYSGYDELRHDLARMFGIEGQLEDPLTSDWKLVYTDHEND 1026
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++LVGDDPW EF N V+ I I SS +V++MS
Sbjct: 1027 ILLVGDDPWEEFVNCVQNIKILSSVEVQQMS 1057
>gi|195615760|gb|ACG29710.1| auxin response factor 4 [Zea mays]
Length = 680
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 137/328 (41%), Positives = 203/328 (61%), Gaps = 17/328 (5%)
Query: 20 RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPA-------DSPRPK 72
R+P ++CRVV++ L A+ TDEVYA++ L+ + D D K
Sbjct: 64 RVPPHVVCRVVDVELRADAATDEVYARLALVAMDTMFGRNINDGETEEKNGEEEDGDGEK 123
Query: 73 VHS---FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFK 129
H+ F K LTASDTSTHGGFSV R+ A +C PPLD Q P+QEL+AKDLHG +WRF+
Sbjct: 124 KHASHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYEQLRPSQELIAKDLHGMKWRFR 183
Query: 130 HIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVI 189
HI+RGQPRRHLLTTGWS+F+ K+LV+GD +FLRG +GEL +GVR + ++ +
Sbjct: 184 HIYRGQPRRHLLTTGWSSFINKKKLVSGDAVLFLRGNDGELRLGVRRAVQLKNEALLEAV 243
Query: 190 SSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMR 247
+ L +L+ ++++ +++F + + PR S+FI+ K+L+++N F+VG R+K+
Sbjct: 244 NCTDSKLLMLSAVANSLDNRSIFHICFNPRVGASEFIVPYCKFLKSLNYPFSVGTRFKVG 303
Query: 248 FEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA 306
E ED+ ER F G ++G+ + P HW SKW+SL ++WD + +RVSPW+IE +
Sbjct: 304 CENEDANERSF-GLIIGISEVDPIHWPGSKWKSLLIKWDGATKYSHQNRVSPWDIEGVGS 362
Query: 307 SATPNLVQPVLAKNKRPRLSMEVPPLDL 334
S + V L+ + R + PP DL
Sbjct: 363 SVS---VTHRLSSSVSKRTKLCFPPSDL 387
>gi|326499428|dbj|BAJ86025.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 648
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 140/330 (42%), Positives = 205/330 (62%), Gaps = 21/330 (6%)
Query: 21 LPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTP--------DPCPADSPRPK 72
LP + CRVV++ L A+ TDEVYA++ L+ E E D D R
Sbjct: 63 LPPHVACRVVDVELCADPATDEVYARLALVAEGEVFEKNMGGGRFEGEDDMEDVDGERKS 122
Query: 73 --VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKH 130
+H F K LTASDTSTHGGFSV R+ A +C PPLD Q P+QELVAKDLHG +WRF+H
Sbjct: 123 RMLHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYQQIRPSQELVAKDLHGAKWRFRH 182
Query: 131 IFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVIS 190
I+RGQPRRHLLTTGWS+FV K+LV+GD +FLRG++GEL +GVR + ++ +
Sbjct: 183 IYRGQPRRHLLTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAIQLKNEALLKAFN 242
Query: 191 SQSMHLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRF 248
S S + L+ +++ +++F + Y PR S+FI+ K+L+++N F +GMR+K+++
Sbjct: 243 SNSSKIHTLSAVVNSLKHRSVFHICYNPRAAASEFIVPYWKFLKSLNRPFCIGMRFKIQY 302
Query: 249 EGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVAS 307
ED ERR SG + G+ + P W SKW+SL V+W++ +R+SPWEIE +
Sbjct: 303 GSEDVNERR-SGMITGINEVDPIRWTGSKWKSLLVRWEDGIDCNSQNRLSPWEIE--IVG 359
Query: 308 ATPNLVQPVLAKNKR-----PRLSMEVPPL 332
+ ++ Q + A + + P+ +++VP L
Sbjct: 360 GSVSIAQSLSASSSKRTKLCPQGNLDVPTL 389
>gi|2262117|gb|AAB63625.1| auxin inducible protein isolog [Arabidopsis thaliana]
Length = 497
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 165/358 (46%), Positives = 219/358 (61%), Gaps = 62/358 (17%)
Query: 282 VQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAP 341
V WDEPASI+RP++VSPWEIEPFV S N+ + V+ KNKRPR EV LD+ AS
Sbjct: 181 VHWDEPASISRPNKVSPWEIEPFVNSE--NVPKSVMLKNKRPRQVSEVSALDVGITASNL 238
Query: 342 WSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKF 401
WS+ L Q H Q +T++ W +SP
Sbjct: 239 WSSVLTQPHEFAQSCITSQ--------------------------------W-SSP---- 261
Query: 402 SQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPN--NDTLLEQVETGRKTETGTSCRLFGI 459
QQ ++A +D K S W ++ +S + +K + ND ++ VE +K ET + RLFGI
Sbjct: 262 -QQCHRDANEDAKK-SDW-LNNSYSVSNVAKDSTLNDQMVSPVEQ-KKPETTANYRLFGI 317
Query: 460 ELINHATS-----SAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQ 514
+L++ + + +AP + +S T + H SD KS+I+K +EKKQE +
Sbjct: 318 DLMSSSLAVPEEKTAPMRPINISKPTMDSH----------SDPKSEISKVSEEKKQEPAE 367
Query: 515 VSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT 574
SPKE QSKQS +S RSRTKVQMQGV VGRA+DL L GY+ LID++E++FDIKG+L +
Sbjct: 368 GSPKEVQSKQS--SSTRSRTKVQMQGVPVGRAVDLNALKGYNELIDDIEKLFDIKGELRS 425
Query: 575 RTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGE 632
R +WEIV+TDDEGDMMLVGDDPW EFCNMVKRIFI S ++VKKM+PG++L M E E
Sbjct: 426 RNQWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKMTPGNQLRMLLREVE 483
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/107 (72%), Positives = 89/107 (83%), Gaps = 2/107 (1%)
Query: 1 MEQLEASTNQ-ELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQ-NEP 58
MEQLEAST Q +LN PLF LP KILC V+N+ L AE++TDEVYAQITL+P ++ +EP
Sbjct: 74 MEQLEASTQQVDLNTMKPLFVLPPKILCNVMNVSLQAEKDTDEVYAQITLIPVGTEVDEP 133
Query: 59 TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPL 105
+PDP P + RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPL
Sbjct: 134 MSPDPSPPELQRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPL 180
>gi|357136486|ref|XP_003569835.1| PREDICTED: auxin response factor 3-like [Brachypodium distachyon]
Length = 657
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 143/333 (42%), Positives = 208/333 (62%), Gaps = 27/333 (8%)
Query: 21 LPSKILCRVVNIHLMAEQETDEVYAQITLLPEP-----------SQNEPTTPDPCPADSP 69
LP + CRVV++ L A+ TDEVYA++ L+ E ++ E T D D
Sbjct: 67 LPPHVACRVVDVELCADPSTDEVYARLALMAEGEVFERNMEGGRNEGEDDTED---GDGE 123
Query: 70 RPK--VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWR 127
R + F K LTASDTSTHGGFSV R+ A +C PLD Q P+QELVAKDLHG +WR
Sbjct: 124 RKSRMLQMFCKTLTASDTSTHGGFSVPRRAAEDCFSPLDYQQIRPSQELVAKDLHGAKWR 183
Query: 128 FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSS 187
F+HI+RGQPRRHLLTTGWS+FV K+LV+GD +FLRG++GEL +GVR + ++
Sbjct: 184 FRHIYRGQPRRHLLTTGWSSFVNKKKLVSGDAVLFLRGDDGELKLGVRRAIQLKNESLFK 243
Query: 188 VISSQSMHLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYK 245
SS S + L+ ++++ +++F + Y PR S+FI+ K+L+++N+ F +GMR+K
Sbjct: 244 AFSSNSSKMNALSAVANSLKHRSVFHICYNPRDAASEFIVPYWKFLKSLNHPFCIGMRFK 303
Query: 246 MRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 304
+++ ED ERR SG + GV + P W S WRSL V+W++ +R+SPWEIE
Sbjct: 304 IQYGSEDVNERR-SGMITGVTEVDPIRWPGSNWRSLLVRWEDGTDCNSQNRLSPWEIE-- 360
Query: 305 VASATPNLVQPVLA-KNKRPRL----SMEVPPL 332
+ + ++ Q + A +KR +L +++VP L
Sbjct: 361 IVGGSVSIAQSLPASSSKRTKLCSQSNLDVPTL 393
>gi|147769056|emb|CAN70219.1| hypothetical protein VITISV_000577 [Vitis vinifera]
Length = 744
Score = 265 bits (678), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 149/335 (44%), Positives = 194/335 (57%), Gaps = 48/335 (14%)
Query: 16 IPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEP---------------------S 54
I F LP +I CRVVN+ L+A +E DEVY Q+TLLP+P
Sbjct: 96 ISTFDLPPQIFCRVVNVQLLANKENDEVYTQVTLLPQPELAGINLEGKELEGLGVDEEGG 155
Query: 55 QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQ 114
PT P H F K LTASDTSTHGGFSV R+ A +C PPLD Q P+Q
Sbjct: 156 GGSPTKSTP----------HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQ 205
Query: 115 ELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGV 174
ELVAKDLHG EWRF+HI+RGQPRRHLLTTGWS FV+ K LV+GD +FLRGE GEL +G+
Sbjct: 206 ELVAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGEGGELRLGI 265
Query: 175 RCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMF---VVYYKPRTSQFIISLNKYL 231
R R ++ +P S+I +Q+ + VL+ A++AVAT++MF V+ K + N+
Sbjct: 266 RRAVRPRNGLPDSIIGNQNSYPNVLSLAANAVATKSMFHGLKVFNKQTHLNMLQDGNQV- 324
Query: 232 EAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASI 290
NKF + M ++ ++ SG V G+ D P+ W +SKWR L V+WD+
Sbjct: 325 ----NKFFLKMLPEIH-NLQNVEVFLSSGVVTGIGDLDPYRWPNSKWRCLMVRWDDDIVS 379
Query: 291 TRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRL 325
+RVSPWEI+P V+ P L+ PRL
Sbjct: 380 DPQERVSPWEIDPSVS-------LPPLSIQSSPRL 407
>gi|297826861|ref|XP_002881313.1| auxin response transcription factor 3 [Arabidopsis lyrata subsp.
lyrata]
gi|297327152|gb|EFH57572.1| auxin response transcription factor 3 [Arabidopsis lyrata subsp.
lyrata]
Length = 588
Score = 264 bits (675), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 144/329 (43%), Positives = 192/329 (58%), Gaps = 28/329 (8%)
Query: 18 LFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTP------DPCPADSPRP 71
++ LP + CR++++ L AE TDEVYAQ++LLPE E D D
Sbjct: 89 IYGLPPHVFCRILDVKLHAETTTDEVYAQVSLLPESEDIERKVREGIIDVDGGEEDYEVL 148
Query: 72 KV----HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWR 127
K H F K LTASDTSTHGGFSV R+ A +C PPLD +Q P+QEL+A+DLHG EWR
Sbjct: 149 KRSNTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWR 208
Query: 128 FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSS 187
F+HI+RGQPRRHLLTTGWS FV K+LV+GD +FLRG++G+L +GV R+ S + +
Sbjct: 209 FRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGKLRLGV----RRASQIEGT 264
Query: 188 VISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMR 247
++ + + T +H A+ S FII K+L+ V+ F +GMR+K R
Sbjct: 265 LMPYRPIVFSAFTTTNHNWASW-----------SNFIIPAPKFLKIVDYPFCIGMRFKAR 313
Query: 248 FEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA 306
E ED+ ERR G + G+ D P W SKWR L V+WD+ + RVSPWEIEP +
Sbjct: 314 VESEDASERRSPGIITGISDLDPIRWPGSKWRCLLVRWDDIEANGHQQRVSPWEIEP--S 371
Query: 307 SATPNLVQPVLAKNKRPRLSMEVPPLDLP 335
+ N V KR R+ D+P
Sbjct: 372 GSISNSGSFVTTGPKRSRIGFSSGKPDIP 400
>gi|10086460|gb|AAG12520.1|AC015446_1 Similar to Auxin response factor 9 [Arabidopsis thaliana]
Length = 479
Score = 261 bits (667), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 129/284 (45%), Positives = 173/284 (60%), Gaps = 53/284 (18%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
+E +E ST EL+ P+F LPSK+ CRVV I ++ TDEVYAQI+L+P+ +
Sbjct: 48 IELIENSTRDELDHIRPIFDLPSKLRCRVVAIDRKVDKNTDEVYAQISLMPDTT------ 101
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
DM+Q TQ LVAKD
Sbjct: 102 ---------------------------------------------DMSQPISTQNLVAKD 116
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTG--WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
L+G EW FKH+FRG P+RH+ T+G WS F T+KRL+ GD FV LRGENGEL G+R
Sbjct: 117 LYGQEWSFKHVFRGTPQRHMFTSGGGWSVFATTKRLIVGDIFVLLRGENGELRFGIRRAK 176
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKF 238
QQ +PSSVIS+ M GV+A+ +A T+ MF V YKP +SQF+IS +K+++A+NN +
Sbjct: 177 HQQGHIPSSVISANCMQHGVIASVVNAFKTKCMFNVVYKPSSSQFVISYDKFVDAMNNNY 236
Query: 239 AVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKV 282
VG R++M+FEG+D E+R+ GT++GV D SPHWKDS+WRSLK+
Sbjct: 237 IVGSRFRMQFEGKDFSEKRYDGTIIGVNDMSPHWKDSEWRSLKI 280
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 60/105 (57%), Positives = 79/105 (75%)
Query: 520 SQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWE 579
+++ SCL TKV MQGVA+ RA+DLT + GY+ LI +LEE+FD+K +L TR +WE
Sbjct: 355 TEATTSCLLFGVDLTKVHMQGVAISRAVDLTAMHGYNQLIQKLEELFDLKDELRTRNQWE 414
Query: 580 IVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 624
IV+T++EG MLVGDDPW EFCNM KRIFICS +++KKM +K
Sbjct: 415 IVFTNNEGAEMLVGDDPWPEFCNMAKRIFICSKEEIKKMKLKNKF 459
>gi|115439989|ref|NP_001044274.1| Os01g0753500 [Oryza sativa Japonica Group]
gi|75106370|sp|Q5JMM1.1|ARFC_ORYSJ RecName: Full=Auxin response factor 3
gi|57899614|dbj|BAD87193.1| putative ETTIN protein [Oryza sativa Japonica Group]
gi|57900329|dbj|BAD87282.1| putative ETTIN protein [Oryza sativa Japonica Group]
gi|113533805|dbj|BAF06188.1| Os01g0753500 [Oryza sativa Japonica Group]
gi|215701503|dbj|BAG92927.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 731
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 138/330 (41%), Positives = 200/330 (60%), Gaps = 21/330 (6%)
Query: 21 LPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE----------PTTPDPCPADSPR 70
LP + CRVV++ L A+ TDEVYA++ L E E + +
Sbjct: 126 LPPHVACRVVDVELCADAATDEVYARLALRAEGEVFERNLHGGGIEREDDMEDGDEERKS 185
Query: 71 PKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKH 130
+H F K LTASDTSTHGGFSV R+ A +C PPLD Q P+QELVAKDLHG +WRF+H
Sbjct: 186 RMLHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDHKQLRPSQELVAKDLHGAKWRFRH 245
Query: 131 IFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVIS 190
I+RGQPRRHLLTTGWS+FV K+LV+GD +FLRG++GEL +GVR + ++ S
Sbjct: 246 IYRGQPRRHLLTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRATQLKNEAIFKAFS 305
Query: 191 SQSMHLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRF 248
S+S + L+ + ++ ++F + Y PR S++++ K++++ N+ +GMR+K F
Sbjct: 306 SESSKMRTLSAVADSLKHGSVFHICYNPRATASEYVVPYWKFVKSFNHPVCIGMRFKFHF 365
Query: 249 EGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVAS 307
E ED ERR SG + GV + P W SKWRSL V+W++ +RVSPWEIE +
Sbjct: 366 ESEDVNERR-SGMIAGVSEVDPIRWPGSKWRSLLVRWEDATDCNSQNRVSPWEIE--IVG 422
Query: 308 ATPNLVQPVLAKNKR-----PRLSMEVPPL 332
+ ++ + A + + P+ +++VP L
Sbjct: 423 GSISVAHSLSASSSKRTKLCPQGNLDVPAL 452
>gi|125550116|gb|EAY95938.1| hypothetical protein OsI_17805 [Oryza sativa Indica Group]
gi|125591966|gb|EAZ32316.1| hypothetical protein OsJ_16524 [Oryza sativa Japonica Group]
Length = 926
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 154/348 (44%), Positives = 210/348 (60%), Gaps = 48/348 (13%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ A+T + N RIP + LPS++LC+V NI L A+++TDEVYAQ+TL P S+ +
Sbjct: 67 EQVAATTRKIPNSRIPNYPNLPSQLLCQVHNITLHADKDTDEVYAQMTLQPVNSETD-VF 125
Query: 61 PDPCPADSPRPK--VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
P P + K F K LTASDTSTHGGFSV R+ A + P LD + P QEL+
Sbjct: 126 PIPTLGAYTKSKHPTEYFCKNLTASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIV 185
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
+DLH W F+HI+RGQP+RHLLTTGWS FV +KRL AGD+ +F+
Sbjct: 186 RDLHDNMWTFRHIYRGQPKRHLLTTGWSLFVGAKRLKAGDSVLFI--------------- 230
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNN 236
SMH+GVLA A+HA ++ + F +YY PRT S F+I + +Y +A
Sbjct: 231 --------------SMHIGVLAAAAHAASSGSSFTIYYNPRTSPSPFVIPVARYNKATYM 276
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+ +VGMR+ M FE E+S +RR++GTVVG+ D+ P W +SKWR+L+V+WDE RP+R
Sbjct: 277 QPSVGMRFAMMFETEESSKRRYTGTVVGISDYDPMRWPNSKWRNLQVEWDEHGYGERPER 336
Query: 296 VSPWEIEPFVASATP--NLVQPVLAKNKR----PRLSMEVPPLDLPSA 337
VS W+IE TP LV P N + P + VP +++ SA
Sbjct: 337 VSIWDIE------TPENTLVFPSSTLNSKRQCLPGYGVSVPGMEIGSA 378
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 588
R+ TKVQ QG +VGR++D+T Y L + MF ++G+L ++W++VY D E D
Sbjct: 823 RTYTKVQKQG-SVGRSIDVTGFRNYHELRSAIACMFGLQGKLEHPGSSEWKLVYVDYEND 881
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++LVGDDPW EF N V+ I I S +V++MS
Sbjct: 882 VLLVGDDPWEEFINCVRCIRILSPSEVQQMS 912
>gi|218189070|gb|EEC71497.1| hypothetical protein OsI_03771 [Oryza sativa Indica Group]
Length = 674
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 137/330 (41%), Positives = 200/330 (60%), Gaps = 21/330 (6%)
Query: 21 LPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE----------PTTPDPCPADSPR 70
LP + CRVV++ L A+ TDEVYA++ L E E + +
Sbjct: 69 LPPHVACRVVDVELCADAATDEVYARLALRAEGEVFERNLHGGGIEREDDMEDGDEERKS 128
Query: 71 PKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKH 130
+H F K LTASDTSTHGGFSV R+ A +C PPLD Q P+QELVAKDLHG +WRF+H
Sbjct: 129 RMLHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDHKQLRPSQELVAKDLHGAKWRFRH 188
Query: 131 IFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVIS 190
I+RGQPRRHLLTTGWS+FV K+LV+GD +FLRG++GEL +GVR + ++ S
Sbjct: 189 IYRGQPRRHLLTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRATQLKNEAIFKAFS 248
Query: 191 SQSMHLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRF 248
S+S + L+ + ++ ++F + Y PR S++++ K++++ N+ +GMR+K +
Sbjct: 249 SESSKMRTLSAVADSLKHGSVFHICYNPRATASEYVVPYWKFVKSFNHPVCIGMRFKFHY 308
Query: 249 EGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVAS 307
E ED ERR SG + GV + P W SKWRSL V+W++ +RVSPWEIE +
Sbjct: 309 ESEDVNERR-SGMIAGVSEVDPIRWPGSKWRSLLVRWEDATDCNSQNRVSPWEIE--IVG 365
Query: 308 ATPNLVQPVLAKNKR-----PRLSMEVPPL 332
+ ++ + A + + P+ +++VP L
Sbjct: 366 GSISVAHSLSASSSKRTKLCPQGNLDVPAL 395
>gi|218201472|gb|EEC83899.1| hypothetical protein OsI_29915 [Oryza sativa Indica Group]
gi|222640880|gb|EEE69012.1| hypothetical protein OsJ_27964 [Oryza sativa Japonica Group]
Length = 1031
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 146/299 (48%), Positives = 192/299 (64%), Gaps = 12/299 (4%)
Query: 36 AEQETDEVYAQITLLPEPS----QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 91
A+ +TDEVYA++TL P + E RP+ F K LTASDTSTHGGF
Sbjct: 3 ADPDTDEVYARMTLQPVSNVTQCDKETLLASELALKQTRPQTEFFCKTLTASDTSTHGGF 62
Query: 92 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 151
SV R+ A P LD + P QEL A+DLH W F+HI+RGQP+RHLLTTGWS FV+
Sbjct: 63 SVPRRAAERIFPRLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSG 122
Query: 152 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 211
KRL+AGD+ +F+R +L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A +
Sbjct: 123 KRLLAGDSVLFIRDAKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAANNSQ 182
Query: 212 FVVYYKPR--TSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 268
F +YY PR TS+F+I KY +AV N+ ++GMR++M FE E+S RR+ GT+ G+ D
Sbjct: 183 FTIYYNPRASTSEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEESGTRRYMGTITGISDL 242
Query: 269 SP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPRL 325
P WK S WR+++V WDE A R RVS WEIEP +A P + P L KRPRL
Sbjct: 243 DPVRWKTSHWRNIQVAWDEAAPTERRTRVSLWEIEPIIA---PFFIYPSPLFTAKRPRL 298
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 57/90 (63%), Gaps = 3/90 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL--HTRTKWEIVYTDDEGD 588
R+ TKV +G AVGR++D+ GYD L ++ MF I+GQL R W++VY D E D
Sbjct: 913 RTYTKVHKRG-AVGRSIDINRYSGYDELKHDVARMFGIEGQLGDQNRVGWKLVYEDHEKD 971
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKM 618
++LVGDDPW +F V+ I I S Q+ +M
Sbjct: 972 VLLVGDDPWEDFVKCVRCIRILSPQEEMQM 1001
>gi|62321072|dbj|BAD94156.1| auxin response factor 9 [Arabidopsis thaliana]
Length = 313
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 162/354 (45%), Positives = 216/354 (61%), Gaps = 62/354 (17%)
Query: 286 EPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSAR 345
EPASI+RP++VSPWEIEPFV S N+ + V+ KNKRPR EV LD+ AS WS+
Sbjct: 1 EPASISRPNKVSPWEIEPFVNSE--NVPKSVMLKNKRPRQVSEVSALDVGITASNLWSSV 58
Query: 346 LAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQL 405
L Q H Q +T++ W +SP QQ
Sbjct: 59 LTQPHEFAQSCITSQ--------------------------------W-SSP-----QQC 80
Query: 406 FQEAIDDNKNISAWPAHSGHSTPHPSKPN--NDTLLEQVETGRKTETGTSCRLFGIELIN 463
++A +D K S W ++ +S + +K + ND ++ VE +K ET + RLFGI+L++
Sbjct: 81 HRDANEDAKK-SDW-LNNSYSVSNVAKDSTLNDQMVSPVEQ-KKPETTANYRLFGIDLMS 137
Query: 464 HATS-----SAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPK 518
+ + +AP + +S T + H SD KS+I+K +EKKQE + SPK
Sbjct: 138 SSLAVPEEKTAPMRPINISKPTMDSH----------SDPKSEISKVSEEKKQEPAEGSPK 187
Query: 519 ESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKW 578
E QSKQS +S RSRTKVQMQGV VGRA+DL L GY+ LID++E++FDIKG+L +R +W
Sbjct: 188 EVQSKQS--SSTRSRTKVQMQGVPVGRAVDLNALKGYNELIDDIEKLFDIKGELRSRNQW 245
Query: 579 EIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGE 632
EIV+TDDEGDMMLVGDDPW EFCNMVKRIFI S ++VKKM+PG++L M E E
Sbjct: 246 EIVFTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKMTPGNQLRMLLREVE 299
>gi|47496698|dbj|BAD19064.1| auxin response factor 4 [Cucumis sativus]
Length = 816
Score = 258 bits (659), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 143/295 (48%), Positives = 193/295 (65%), Gaps = 7/295 (2%)
Query: 34 LMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTHGGFS 92
+ A+ ETDEVYAQ+TL P +Q P +P R + F K LTASDTSTHGGFS
Sbjct: 1 MHADAETDEVYAQMTLQPLSAQELKEAYLPAELGTPSRQPTNYFCKTLTASDTSTHGGFS 60
Query: 93 VLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSK 152
V R+ A + PPLD + P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS FV++K
Sbjct: 61 VPRRAAEKVFPPLDFSMQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAK 120
Query: 153 RLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMF 212
RLVAGD +F+ E +L +G+R +R Q+ MPSSV+SS SMHLG+LA A+HA AT + F
Sbjct: 121 RLVAGDAVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHLGLLAAAAHAAATISRF 180
Query: 213 VVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFS 269
+++ PR S+F+I L KY++AV + + +VGMR++M FE E+ + + +
Sbjct: 181 TIFFNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETENQVFVATWAQSLALVTWI 240
Query: 270 P-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 323
P W++S WRS+KV WDE + R +VS WEIEP + P P + KRP
Sbjct: 241 PVRWQNSHWRSVKVGWDESTAGERQPKVSLWEIEPL--TTFPMYPSPFPLRLKRP 293
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 530 NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEG 587
N + KV G R+LD+T Y L EL MF ++G+L R+ W++V+ D E
Sbjct: 682 NGTFVKVHKSGT-YSRSLDITKFNSYPELRSELARMFGLEGELEDPLRSGWQLVFVDREN 740
Query: 588 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 618
D++L+GD PW EF N V I I S ++V+ M
Sbjct: 741 DVLLLGDGPWPEFVNSVWCIKILSPEEVQDM 771
>gi|449446636|ref|XP_004141077.1| PREDICTED: auxin response factor 19-like [Cucumis sativus]
Length = 1092
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 148/309 (47%), Positives = 204/309 (66%), Gaps = 11/309 (3%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQNEPT 59
EQ+ AS N+E + IP + LPSK++C + N+ L A+ ETDEVYAQ+TL P + E
Sbjct: 51 EQVAASMNKETD-FIPNYPNLPSKLICMLHNVTLHADPETDEVYAQMTLQPVNKYEKEAL 109
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
R F K LTASDTSTHGGFSV R+ A + PPL+MN + L++
Sbjct: 110 LASDIGLKQSRQPAEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLNMNMNVVI--LISL 167
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
+H IF GQP+RHLLTTGWS FV++KRL AGD+ +F+R E +L +G+R R
Sbjct: 168 QIHK---NVHCIFSGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDEKSQLLLGIRRANR 224
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNK 237
QQ ++ SSVISS SMH+G+LA+A+HA A + F ++Y PR S+F+I L KY +A+ +
Sbjct: 225 QQPALSSSVISSDSMHIGILASAAHAAANNSPFTIFYNPRASPSEFVIPLAKYNKAMYTQ 284
Query: 238 FAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRV 296
++GMR++M FE E+S RR+ GT+ G+ D S WK+S+WR+L+V WDE A+ RP+RV
Sbjct: 285 VSLGMRFRMMFETEESGVRRYMGTITGISDMDSVRWKNSQWRNLQVGWDESAAGERPNRV 344
Query: 297 SPWEIEPFV 305
S WE+EP V
Sbjct: 345 SIWEVEPVV 353
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 63/91 (69%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 588
R+ TKVQ +G +VGR +D+T GYD L +L MF I+GQL RT W++VY D E D
Sbjct: 965 RTYTKVQKRG-SVGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTDWKLVYVDHEND 1023
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++LVGDDPW EF + V+ I I SS +V++MS
Sbjct: 1024 ILLVGDDPWDEFVSCVQSIKILSSAEVQQMS 1054
>gi|300373058|gb|ADG43145.1| auxin response factor 11 [Zea mays]
gi|414880472|tpg|DAA57603.1| TPA: hypothetical protein ZEAMMB73_690278 [Zea mays]
Length = 688
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 132/295 (44%), Positives = 181/295 (61%), Gaps = 14/295 (4%)
Query: 21 LPSKILCRVVNIHLMAEQETDEVYAQITLLPE----------PSQNEPTTPDPCPADSPR 70
LP + CRV ++ L A+ TDEVYA++ L+ E + + +
Sbjct: 63 LPPHVACRVADVELCADAATDEVYARLALVAEGEAFGRNLRGGGVDGDDDMEDFDVERKS 122
Query: 71 PKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKH 130
+H F K LTASDTSTHGGFSV R+ A +C PPLD NQ P+QELVAKDLHG +W+F+H
Sbjct: 123 RMLHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYNQLRPSQELVAKDLHGAKWKFRH 182
Query: 131 IFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVIS 190
I+RGQPRRHLLTTGWS+FV K+LV+GD +FLRG++GEL +GVR + ++ S
Sbjct: 183 IYRGQPRRHLLTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAIQLKNEALFDDFS 242
Query: 191 SQSMHLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRF 248
S L + ++ +++F + Y PR S++II +K+L+++N F +G R ++
Sbjct: 243 CDSTKRHTLLAVADSLKHKSVFHISYNPRATASEYIIPHHKFLKSLNLPFCIGARINLQC 302
Query: 249 EGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 302
ED ERR SG VV V + P W SKWRSL V+W++ DRVSPWEIE
Sbjct: 303 HNEDVSERR-SGMVVHVSEIDPMKWPGSKWRSLLVRWEDGVECNGQDRVSPWEIE 356
>gi|295844326|gb|ADG43160.1| auxin response factor 26 [Zea mays]
Length = 686
Score = 251 bits (642), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 131/295 (44%), Positives = 181/295 (61%), Gaps = 14/295 (4%)
Query: 21 LPSKILCRVVNIHLMAEQETDEVYAQITLLPE----------PSQNEPTTPDPCPADSPR 70
LP ++CRV ++ L A+ TDEV A++ L+ E + A+
Sbjct: 63 LPPHVVCRVADVELCADAATDEVCARLALVAEGEAFGRNLGGGGVEGDDGMEDFDAERKS 122
Query: 71 PKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKH 130
+H F K LTASDTSTHGGFSV R+ A +C PPLD NQ P+QELVAKDLHG +W+F+H
Sbjct: 123 GMLHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYNQLRPSQELVAKDLHGAKWKFRH 182
Query: 131 IFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVIS 190
I+RGQPRRHLLTTGWS+FV K+LV+GD +FLRG++GEL +GVR + ++ +
Sbjct: 183 IYRGQPRRHLLTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAIQLKNEALFEDFN 242
Query: 191 SQSMHLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRF 248
S S L + ++ +++F + Y PR S++II K+L+++N+ +G R +
Sbjct: 243 SDSTKRHSLTAVADSLKNRSVFHISYNPRATASEYIIPYAKFLKSLNHPVCIGARINFQC 302
Query: 249 EGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 302
ED ERR SG VV + + P W SKWRSL V+W++ A DRVSPWEIE
Sbjct: 303 HNEDVSERR-SGVVVRISEIDPMKWPGSKWRSLLVRWEDGAECNGQDRVSPWEIE 356
>gi|222622145|gb|EEE56277.1| hypothetical protein OsJ_05331 [Oryza sativa Japonica Group]
Length = 1136
Score = 251 bits (642), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 147/326 (45%), Positives = 206/326 (63%), Gaps = 18/326 (5%)
Query: 4 LEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQN-EPTTP 61
+ AS ++++ +P + LPSK++C + ++L A+ +TDEVYAQ+TL P + E
Sbjct: 80 VAASMQKDVDAHVPSYPNLPSKLICLLHGVNLHADPDTDEVYAQMTLQPVNTYGKEALQI 139
Query: 62 DPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDL 121
RP++ F K LTASDTSTHGGFSV R+ A + PPLD + P QEL A+D+
Sbjct: 140 SELALKQARPQMEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDI 199
Query: 122 HGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQ 181
H W F+HI+RGQP+RHLLTTGWS FV+ KRL AGD+ + +R E +L +G+R RQ
Sbjct: 200 HDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVIVVRDEKHQLLLGIRRANRQP 259
Query: 182 SSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAV-NNKF 238
+++ SSV+SS SMH+GVLA A+HA A + F ++Y PR S +F+I KY +A+ +N+
Sbjct: 260 TNISSSVLSSDSMHIGVLAAAAHAAANSSPFTIFYNPRASPTEFVIPFAKYQKALYSNQI 319
Query: 239 AVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSP 298
++GMR++M FE E+ RR+ GT+ G+ D P V WDE A+ R +RVS
Sbjct: 320 SLGMRFRMMFETEELGTRRYMGTITGISDLDP-----------VGWDESAAGERRNRVSI 368
Query: 299 WEIEPFVASATPNLVQPVLAKNKRPR 324
WEIEP VA+ QP KRPR
Sbjct: 369 WEIEP-VAAPFFLCPQPFFGV-KRPR 392
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 114/230 (49%), Gaps = 24/230 (10%)
Query: 397 PRVKFSQ-QLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCR 455
P F+Q Q+F++A+ D + P++SG NND LL +TE
Sbjct: 880 PSSNFNQHQMFKDALPDVEMEGVDPSNSGLF-----GINNDNLLG---FPIETEDLLINA 931
Query: 456 LFGIELINHATSSA----PSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQE 511
L ++ NH ++ P +K + ++T S + S G+SD+A +
Sbjct: 932 LDSVKYQNHISTDVENNYPMQKDALQEIST--------SMVSQSFGQSDMAFNSIDSAIN 983
Query: 512 QVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQ 571
K S L R+ TKV +G AVGR++D+ GY+ L L MF I+GQ
Sbjct: 984 DGAFLNKNSWPAAPLLQRMRTFTKVYKRG-AVGRSIDIGRYSGYEELKHALARMFGIEGQ 1042
Query: 572 LHTRTK--WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
L R + W++VY D E D++L+GDDPW EF N V+ I I S Q+V++MS
Sbjct: 1043 LEDRQRIGWKLVYKDHEDDILLLGDDPWEEFVNCVRCIRILSPQEVQQMS 1092
>gi|413952425|gb|AFW85074.1| hypothetical protein ZEAMMB73_374158 [Zea mays]
Length = 683
Score = 251 bits (641), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 131/295 (44%), Positives = 181/295 (61%), Gaps = 14/295 (4%)
Query: 21 LPSKILCRVVNIHLMAEQETDEVYAQITLLPE----------PSQNEPTTPDPCPADSPR 70
LP ++CRV ++ L A+ TDEV A++ L+ E + A+
Sbjct: 63 LPPHVVCRVADVELCADAATDEVCARLALVAEGEAFGRNLGGGGVEGDDGMEDFDAERKS 122
Query: 71 PKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKH 130
+H F K LTASDTSTHGGFSV R+ A +C PPLD NQ P+QELVAKDLHG +W+F+H
Sbjct: 123 GMLHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYNQLRPSQELVAKDLHGAKWKFRH 182
Query: 131 IFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVIS 190
I+RGQPRRHLLTTGWS+FV K+LV+GD +FLRG++GEL +GVR + ++ +
Sbjct: 183 IYRGQPRRHLLTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAIQLKNEALFEDFN 242
Query: 191 SQSMHLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRF 248
S S L + ++ +++F + Y PR S++II K+L+++N+ +G R +
Sbjct: 243 SDSTKRHSLTAVADSLKNRSVFHISYNPRATASEYIIPYAKFLKSLNHPVCIGARINFQC 302
Query: 249 EGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 302
ED ERR SG VV + + P W SKWRSL V+W++ A DRVSPWEIE
Sbjct: 303 HNEDVSERR-SGVVVRISEIDPMKWPGSKWRSLLVRWEDGAECNGQDRVSPWEIE 356
>gi|413952426|gb|AFW85075.1| hypothetical protein ZEAMMB73_374158 [Zea mays]
Length = 393
Score = 251 bits (641), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 131/295 (44%), Positives = 181/295 (61%), Gaps = 14/295 (4%)
Query: 21 LPSKILCRVVNIHLMAEQETDEVYAQITLLPE----------PSQNEPTTPDPCPADSPR 70
LP ++CRV ++ L A+ TDEV A++ L+ E + A+
Sbjct: 63 LPPHVVCRVADVELCADAATDEVCARLALVAEGEAFGRNLGGGGVEGDDGMEDFDAERKS 122
Query: 71 PKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKH 130
+H F K LTASDTSTHGGFSV R+ A +C PPLD NQ P+QELVAKDLHG +W+F+H
Sbjct: 123 GMLHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYNQLRPSQELVAKDLHGAKWKFRH 182
Query: 131 IFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVIS 190
I+RGQPRRHLLTTGWS+FV K+LV+GD +FLRG++GEL +GVR + ++ +
Sbjct: 183 IYRGQPRRHLLTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAIQLKNEALFEDFN 242
Query: 191 SQSMHLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRF 248
S S L + ++ +++F + Y PR S++II K+L+++N+ +G R +
Sbjct: 243 SDSTKRHSLTAVADSLKNRSVFHISYNPRATASEYIIPYAKFLKSLNHPVCIGARINFQC 302
Query: 249 EGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 302
ED ERR SG VV + + P W SKWRSL V+W++ A DRVSPWEIE
Sbjct: 303 HNEDVSERR-SGVVVRISEIDPMKWPGSKWRSLLVRWEDGAECNGQDRVSPWEIE 356
>gi|242074738|ref|XP_002447305.1| hypothetical protein SORBIDRAFT_06g032500 [Sorghum bicolor]
gi|241938488|gb|EES11633.1| hypothetical protein SORBIDRAFT_06g032500 [Sorghum bicolor]
Length = 821
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 149/322 (46%), Positives = 205/322 (63%), Gaps = 30/322 (9%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP--EPSQNEP 58
EQ+ ASTN+E++ IP + LP +++C++ ++ + A+ ETDEVYAQ+TL P QN+
Sbjct: 59 EQVAASTNKEVDGHIPNYPNLPPQLICQLHDVTMHADVETDEVYAQMTLQPLNPQEQNDA 118
Query: 59 TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
P S +P + F K LTASDTSTHGGFSV R+ A PPL ++ S+ +
Sbjct: 119 YLPAEMGIMSKQP-TNYFCKTLTASDTSTHGGFSVPRRAAERVFPPLVISHSSLQHRSL- 176
Query: 119 KDLHGYEWRFKHIFR------------GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGE 166
LHG IF QP+RHLLTTGWS FV++KRLVAGD+ +F+ E
Sbjct: 177 --LHG-------IFMMSSGNSGISSEASQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNE 227
Query: 167 NGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFI 224
+L +G+R +R Q+ MPSSV+SS SMH+G+LA A+HA AT + F ++Y PR S+F+
Sbjct: 228 KNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFV 287
Query: 225 ISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKV 282
I L+KY++AV + + +VGMR++M FE E+S RR+ GT+ V D P W S WRS+KV
Sbjct: 288 IPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTITEVSDADPVRWPSSYWRSVKV 347
Query: 283 QWDEPASITRPDRVSPWEIEPF 304
WDE + RP RVS WEIEP
Sbjct: 348 GWDESTAGERPPRVSLWEIEPL 369
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 60/95 (63%), Gaps = 4/95 (4%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 588
R+ KV G +VGR+LD+T Y L +EL +MF IKGQL R+ W++V+ D E D
Sbjct: 722 RTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDREND 780
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS-PGS 622
++L+GDDPW F N V I I S +DV KM PG+
Sbjct: 781 VLLLGDDPWESFVNSVWYIKILSPEDVHKMGKPGN 815
>gi|224062027|ref|XP_002300718.1| predicted protein [Populus trichocarpa]
gi|222842444|gb|EEE79991.1| predicted protein [Populus trichocarpa]
Length = 316
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 134/271 (49%), Positives = 185/271 (68%), Gaps = 10/271 (3%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ ST + +IP + LPS++LC+V N+ L A+++TDE++AQ++L P S+ +
Sbjct: 48 EQVAVSTKRSATSQIPNYPNLPSQLLCQVHNVTLHADKDTDEIHAQMSLQPVNSEKDVF- 106
Query: 61 PDPCPADSPRPKVHS---FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELV 117
P P +P H F K LTASDTSTHGGFSV R+ A + PPLD + P+QELV
Sbjct: 107 --PVPDFGLKPSKHPSEFFCKALTASDTSTHGGFSVPRRAAEKLFPPLDYSMQPPSQELV 164
Query: 118 AKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCL 177
+DLH W F+HI+RGQP+RHLLTTGWS FV SKRL AGD+ +F+R E L VGVR
Sbjct: 165 VRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFVGSKRLKAGDSVLFIRNEKSHLMVGVRHA 224
Query: 178 ARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV- 234
RQQ+++PSSV+S+ SMH+GVLA A+HA ++ F ++Y PR S F+I L K+ + V
Sbjct: 225 NRQQTTLPSSVLSADSMHIGVLAAAAHAAGNRSPFTIFYNPRACPSDFVIPLIKFRKTVF 284
Query: 235 NNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 265
+ +VGMR+ M FE E+S +RR+ GT+VG+
Sbjct: 285 GTQVSVGMRFGMMFETEESGKRRYMGTIVGI 315
>gi|326523321|dbj|BAJ88701.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 697
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 136/331 (41%), Positives = 200/331 (60%), Gaps = 20/331 (6%)
Query: 21 LPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQ---------NEPTTPDPCPADSP-R 70
+P + CRVV + L A+ TDEVYA++ L+ E +E + D +
Sbjct: 64 VPPHVACRVVGVELCADAATDEVYARLALVAEAEMFRQSVRERGSEEGEDEMAAGDGENK 123
Query: 71 PKV-HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFK 129
P++ H F K LTASDTSTHGGFSV R+ A +C LD Q P+QELVAKDLHG +WRF+
Sbjct: 124 PRMPHMFCKTLTASDTSTHGGFSVPRRAAEDCFAHLDYKQVRPSQELVAKDLHGTQWRFR 183
Query: 130 HIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVI 189
HI+RGQPRRHLLTTGWS+FV K+LV+GD +FLRG++GEL +GVR + ++ +
Sbjct: 184 HIYRGQPRRHLLTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAVQLRNEALFEAV 243
Query: 190 SSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMR 247
++ L L+ + ++ +++F V + PR+ S+FI+ ++ +++N+ F++GMR+K+
Sbjct: 244 NTNDSKLHTLSAVASSLENRSIFHVCFDPRSGASEFIVPYWRFSKSLNHTFSIGMRFKVS 303
Query: 248 FEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA 306
E +D+ ER +G + G+ + P W SKWR L V+WD+ RVSPWEIE
Sbjct: 304 NESDDANERS-TGLISGISEVDPIRWPASKWRCLMVRWDDSTHCNHQRRVSPWEIERVGG 362
Query: 307 SATPNLVQPVL--AKNKRPRLSMEVPPLDLP 335
S + V L + +KR +L LD P
Sbjct: 363 SIS---VTDCLSASSSKRAKLYFPQGNLDAP 390
>gi|8954059|gb|AAF82232.1|AC069143_8 Contains similarity to a non-phototropic hypocotyl 4 (NPH4) protein
from Arabidopsis thaliana gb|AF186466 [Arabidopsis
thaliana]
Length = 1062
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 155/349 (44%), Positives = 210/349 (60%), Gaps = 35/349 (10%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ AS Q+ IP + LPSK++C + ++ L A+ ETDEVYAQ+TL P N
Sbjct: 51 EQVAASM-QKQTDFIPNYPNLPSKLICLLHSVTLHADTETDEVYAQMTLQPVNKLN---- 105
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
R F K LTASDTSTHGGFSV R+ A + PPLD + P QE+VAKD
Sbjct: 106 ---------RQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKD 156
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
LH W F+HI+RG WS FV++KRL AGD+ +F+R E +L +G+R RQ
Sbjct: 157 LHDTTWTFRHIYRG----------WSVFVSTKRLFAGDSVLFVRDEKSQLMLGIRRANRQ 206
Query: 181 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKF 238
++ SSVISS SMH+G+LA A+HA A + F +++ PR S+F++ L KY +A+ +
Sbjct: 207 TPTLSSSVISSDSMHIGILAAAAHANANSSPFTIFFNPRASPSEFVVPLAKYNKALYAQV 266
Query: 239 AVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVS 297
++GMR++M FE ED RR+ GTV G+ D P WK S+WR+L+V WDE + RP RVS
Sbjct: 267 SLGMRFRMMFETEDCGVRRYMGTVTGISDLDPVRWKGSQWRNLQVGWDESTAGDRPSRVS 326
Query: 298 PWEIEPFVASATP-NLVQPVLAKNKRPRL-SMEVPPLDLPSA--ASAPW 342
WEIEP + TP + P + K PR M LD+ +A + PW
Sbjct: 327 IWEIEPVI---TPFYICPPPFFRPKYPRQPGMPDDELDMENAFKRAMPW 372
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 64/91 (70%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 588
R+ TKVQ +G +VGR++D+T GYD L +L MF I+GQL + W++VYTD E D
Sbjct: 934 RTYTKVQKRG-SVGRSIDVTRYSGYDELRHDLARMFGIEGQLEDPLTSDWKLVYTDHEND 992
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++LVGDDPW EF N V+ I I SS +V++MS
Sbjct: 993 ILLVGDDPWEEFVNCVQNIKILSSVEVQQMS 1023
>gi|357132990|ref|XP_003568111.1| PREDICTED: auxin response factor 14-like [Brachypodium distachyon]
Length = 676
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 138/329 (41%), Positives = 198/329 (60%), Gaps = 18/329 (5%)
Query: 21 LPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPC--------PADSPRPK 72
+P + CRV+++ L A+ TDEVYA++ L+ + + +P+
Sbjct: 70 VPPHVACRVLDVELCADAATDEVYARLALVAVCEMSRQNLGGTAWGEEDMEFGSGEKKPR 129
Query: 73 V-HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 131
+ H F K LTASDTSTHGGFSV R+ A +C PPLD Q P+QEL+AKDLHG +WRF+HI
Sbjct: 130 MPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYEQVRPSQELIAKDLHGTQWRFRHI 189
Query: 132 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGV-RCLARQQSSMPSSVIS 190
+RGQPRRHLLTTGWS+FV K+LV+GD +FLRG +GEL +G+ R + + + +V S
Sbjct: 190 YRGQPRRHLLTTGWSSFVNKKKLVSGDAVLFLRGCDGELRLGIRRAVQLRNEDLFKAVNS 249
Query: 191 SQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRF 248
S S + A AS + ++ F V + PR+ S+FI+ K+ +++N+ ++GMR+K+ +
Sbjct: 250 SDSRQRTLSAVAS-SFRNRSTFHVCFDPRSGASEFIVPYWKFSKSLNHPLSIGMRFKLSY 308
Query: 249 EGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVAS 307
E ED+ ER +G + GV + P W SKWR L V+WD R+SPWEIE
Sbjct: 309 ESEDANERS-TGMISGVSEVDPIRWPGSKWRCLLVRWDGNTDCNHQHRISPWEIE--RVG 365
Query: 308 ATPNLVQPVLAKN-KRPRLSMEVPPLDLP 335
++ + A N KR +LS LD P
Sbjct: 366 GMNSVTHSLSASNSKRTKLSFPESNLDAP 394
>gi|326499245|dbj|BAK06113.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 467
Score = 248 bits (634), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 171/467 (36%), Positives = 250/467 (53%), Gaps = 60/467 (12%)
Query: 196 LGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDS 253
GVLA+ASHA+ T ++FVVYY+PR SQ+I+S+NKY A F VGMR++M FE ED
Sbjct: 1 FGVLASASHAIKTNSIFVVYYRPRLSQSQYIVSVNKYHLASKTGFTVGMRFRMNFEAEDV 60
Query: 254 PERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITR-PDRVSPWEIEPFVAS--ATP 310
P ++F GT+VG DFSP W S+W+SLKVQWD+ +I P+RVSPWEI+ S A
Sbjct: 61 PVKKFFGTIVGDGDFSPQWSGSEWKSLKVQWDDSVAICNGPERVSPWEIDSSDVSSPAIS 120
Query: 311 NLVQPVLAKNKRPRLSMEVPPLDLPSAASAP--WSARLAQSHNLTQLSVTAEDKRIDN-- 366
L+Q AKNKRPR + E ++LPS W + + Q H T + +++ RI
Sbjct: 121 TLLQSS-AKNKRPRETNE--NMNLPSQEPTQEFWLSGVTQQHERTYVG-SSDPNRISGSG 176
Query: 367 --HVAWHHKHSDFSS-NSNFMSRTQ---SDGEWL---------TSPRV-KFSQQLFQEAI 410
+ W +H+ + + +S+ + +T DG W SP + + +Q+L + A
Sbjct: 177 YHQILWPSEHAGYGAMSSSSVCQTPLGLGDG-WFKDFNTSSQGVSPTLSEITQKLNRVAS 235
Query: 411 DDNKNISAWPAH--SGHSTPHPSK--------PNNDTLLEQV-----ETGRKTETGTSCR 455
+ + W G+ P+ P L EQV + K + R
Sbjct: 236 SEGRAPPPWATALCGGYRAEEPTSKLSCNATLPLPSPLTEQVAPYLLKVAEKVKGPGMVR 295
Query: 456 LFGIELIN--HATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQV 513
LFG+ L+ + ++A + V + T I ++ + S + K E
Sbjct: 296 LFGVNLMENTNNAAAATAGNASVGAGETSARITGSVEGSGQLSAFSKVTKVVNE------ 349
Query: 514 QVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH 573
SP+E QS+QS + R+R KVQM G AVGRA+DL +L GY+ L +ELE+MF+IK
Sbjct: 350 --SPREIQSQQSSI--GRNRVKVQMHGNAVGRAVDLASLDGYERLTNELEQMFEIK---D 402
Query: 574 TRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 620
+ +++ + D+EGD M VGDDPW EFC MV++I I +D K M P
Sbjct: 403 IKQNFKVAFNDNEGDTMKVGDDPWMEFCRMVRKIVIYPIEDDKNMDP 449
>gi|158564103|sp|Q0DGS1.2|ARFN_ORYSJ RecName: Full=Auxin response factor 14
Length = 687
Score = 248 bits (634), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 127/325 (39%), Positives = 200/325 (61%), Gaps = 17/325 (5%)
Query: 25 ILCRVVNIHLMAEQETDEVYAQITLLPE-----------PSQNEPTTPDPCPADSPRPKV 73
+ CRVV + L A+ TDEVYA++ L+ E ++ + C A+
Sbjct: 71 VACRVVGVELRADAATDEVYARLALVAEGEMLQRNFREGGGEDGAGEMEGCDAEKKPRMP 130
Query: 74 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 133
H F K LTASDTSTHGGFSV R+ A +C PPLD P+QEL+A DLHG +W+F+HI+R
Sbjct: 131 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKTVRPSQELIAVDLHGTQWKFRHIYR 190
Query: 134 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQS 193
GQPRRHLLT GWS+FV K+LV+GD +FLRG++G+L +GVR + ++ ++S
Sbjct: 191 GQPRRHLLTIGWSSFVNRKKLVSGDAVLFLRGDDGQLRLGVRRAVQLRNEALFEPVNSSD 250
Query: 194 MHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGE 251
L +L++ + ++ +++F + + PR+ S+FI+ + L+++N+ F++GMR+++ +E E
Sbjct: 251 SKLRILSSVASSLENKSVFHICFNPRSGASEFIVPYWRLLKSLNHPFSIGMRFRVCYESE 310
Query: 252 DSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP 310
D+ ER +G + G+ + P W S+W+ L V+WD+ + +RVSPWEIE S +
Sbjct: 311 DANERS-AGLISGISEVDPIRWPGSRWKCLLVRWDDSTDSSHQNRVSPWEIERVGGSVS- 368
Query: 311 NLVQPVLAKNKRPRLSMEVPPLDLP 335
+ + + +KR +L LD P
Sbjct: 369 -VTHSLSSGSKRTKLHFPQGSLDTP 392
>gi|36939192|gb|AAQ86960.1| ETTIN-like auxin response factor [Triticum aestivum]
Length = 537
Score = 248 bits (634), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 122/268 (45%), Positives = 179/268 (66%), Gaps = 11/268 (4%)
Query: 73 VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIF 132
+H F K LTASDTSTHGGFSV R+ A +C PPLD Q P+QELVAKDLHG +WRF+HI+
Sbjct: 8 LHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYQQIRPSQELVAKDLHGAKWRFRHIY 67
Query: 133 RGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQ 192
RGQPRRHLLTTGWS+FV K+LV+GD +FLRG++GEL +GVR + ++ +S
Sbjct: 68 RGQPRRHLLTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAIQLKNEALLKAFNSN 127
Query: 193 SMHLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEG 250
S + L+ ++++ +++F + Y PR S+FII K+L+++N F +GMR+K+++
Sbjct: 128 SSKIHTLSAVANSLKHRSVFHICYNPRAAASEFIIPYWKFLKSLNRPFCIGMRFKIQYGS 187
Query: 251 EDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASAT 309
ED ERR SG + G+ D P W SKW+SL V+W++ +R+SPWEIE + +
Sbjct: 188 EDVNERR-SGMITGINDVDPIRWTGSKWKSLLVRWEDGTDCNSQNRLSPWEIE--IVGGS 244
Query: 310 PNLVQPVLAKNKR-----PRLSMEVPPL 332
++ Q + A + + P+ +++VP L
Sbjct: 245 VSIAQSLSASSSKRTKLCPQGNVDVPTL 272
>gi|70663942|emb|CAE03604.2| OSJNBb0004A17.6 [Oryza sativa Japonica Group]
Length = 831
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 142/324 (43%), Positives = 189/324 (58%), Gaps = 60/324 (18%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQNEPT 59
EQ+ ASTN+E+ IP + LP++++C++ ++ + A+ ETDEVYAQ+TL P P +
Sbjct: 59 EQVAASTNKEVEGHIPNYPNLPAQLICQLHDVTMHADVETDEVYAQMTLQPLNPVRRLGF 118
Query: 60 TPDPCPAD------------------SPRPKVHSFSKVLTASDTSTHGGFSVLRKHATEC 101
D C A+ S +P + F K LTASDTSTHGGFSV R+ A
Sbjct: 119 LHDVCSAEVLMQEQNDAYLPAEMGIMSKQP-TNYFCKTLTASDTSTHGGFSVPRRAAERV 177
Query: 102 LPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFV 161
PPLD Q P QEL+A+D+H EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +
Sbjct: 178 FPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVL 237
Query: 162 FLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS 221
F+ E +L +G+R +R Q+ MPSSV+SS SMH+G+LA A+HA AT + F ++Y P
Sbjct: 238 FIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFYNP--- 294
Query: 222 QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSL 280
R+ GT+ V D P W S WRS+
Sbjct: 295 -----------------------------------RYMGTITEVSDADPVRWPSSYWRSV 319
Query: 281 KVQWDEPASITRPDRVSPWEIEPF 304
KV WDE + RP RVS WEIEP
Sbjct: 320 KVGWDESTAGERPPRVSLWEIEPL 343
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 52/81 (64%), Gaps = 4/81 (4%)
Query: 529 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 586
+ R+ KV G +VGR+LD+T Y L +EL +MF IKGQL R+ W++V+ D E
Sbjct: 693 ATRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRE 751
Query: 587 GDMMLVGDDPWHEFCNMVKRI 607
D++L+GDDPW EF N+ +
Sbjct: 752 NDVLLLGDDPW-EFINIYMNV 771
>gi|413934806|gb|AFW69357.1| hypothetical protein ZEAMMB73_033328 [Zea mays]
Length = 975
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 124/242 (51%), Positives = 171/242 (70%), Gaps = 4/242 (1%)
Query: 69 PRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRF 128
PRP+ F K LTASDTSTHGGFSV R+ A + PPLD + P QE+ A+DLH W F
Sbjct: 93 PRPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIQARDLHDNVWTF 152
Query: 129 KHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSV 188
+HI+RGQP+RHLLTTGWS FV+ KRL+AGD+ +F+R E +L +G R RQ +++ SSV
Sbjct: 153 RHIYRGQPKRHLLTTGWSLFVSGKRLLAGDSVIFVRDEKQQLLLGTRRANRQPTNISSSV 212
Query: 189 ISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAV-NNKFAVGMRYK 245
+SS SMH+G+LA A+HA A + F ++Y PR S +F++ KY +A+ N+ ++GMR++
Sbjct: 213 LSSDSMHIGILAAAAHAAANNSPFTIFYNPRASPTEFVVPFAKYQKALYGNQISLGMRFR 272
Query: 246 MRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 304
M FE E+ RR+ GT+ G+ D P WK+S+WR+++V WDE A+ R +RVS WEIEP
Sbjct: 273 MMFETEELGTRRYMGTITGISDLDPVRWKNSQWRNIQVGWDESAAGERRNRVSIWEIEPV 332
Query: 305 VA 306
A
Sbjct: 333 AA 334
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 588
R+ TKV +G AVGR++D++ GYD L L MF ++GQL R + W++VY D E D
Sbjct: 842 RTFTKVYKRG-AVGRSIDISQFSGYDELKHALARMFSMEGQLEERQRIGWKLVYKDHEDD 900
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++L+GDDPW EF N VK I I S Q+V+++S
Sbjct: 901 ILLLGDDPWEEFVNCVKCIRILSPQEVQQIS 931
>gi|147770403|emb|CAN69277.1| hypothetical protein VITISV_023245 [Vitis vinifera]
Length = 1183
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 131/272 (48%), Positives = 176/272 (64%), Gaps = 10/272 (3%)
Query: 36 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 95
A+ ETDEVYAQ+TL +P E R V F K LTASDTSTHGGFSV R
Sbjct: 123 ADAETDEVYAQMTL--QPYDKEALLASDLGLKQSRQPVEFFCKTLTASDTSTHGGFSVPR 180
Query: 96 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 155
+ A + PPLD + P QE+VA+DLH W F+HI+RGQP+RHLLTTGWS FV++KRL
Sbjct: 181 RAAEKIFPPLDFSMQPPAQEIVARDLHDNTWTFRHIYRGQPKRHLLTTGWSVFVSTKRLF 240
Query: 156 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 215
AGD+ +F+R E +L +G+R RQQ ++ SSVIS SMH+G+LA A+HA A + F ++
Sbjct: 241 AGDSVLFIRDEKSQLLLGIRRANRQQPALSSSVISCDSMHIGILAAAAHAAANNSPFTIF 300
Query: 216 YKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWK 273
Y PR S+F+I L KY +A+ + ++GMR++M FE E+S RR+ GT+ G+ +
Sbjct: 301 YNPRASPSEFVIPLAKYNKAMYTQVSLGMRFRMMFETEESGVRRYMGTITGISELRCCAM 360
Query: 274 DSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 305
+ K +P++ RP RVS WEIEP V
Sbjct: 361 E------KFTMAQPSAGERPSRVSIWEIEPVV 386
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 64/91 (70%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 588
R+ TKVQ +G +VGR++D+T GYD L +L MF I+GQL RT W++VY D E D
Sbjct: 1056 RTYTKVQKRG-SVGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTDWKLVYVDHEND 1114
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++LVGDDPW EF + V+ I I SS +V++MS
Sbjct: 1115 ILLVGDDPWEEFVSCVQSIKILSSAEVQQMS 1145
>gi|194689820|gb|ACF78994.1| unknown [Zea mays]
Length = 585
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 119/264 (45%), Positives = 174/264 (65%), Gaps = 7/264 (2%)
Query: 74 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 133
H F K LTASDTSTHGGFSV R+ A +C PPLD Q P+QEL+AKDLHG +WRF+HI+R
Sbjct: 33 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYEQLRPSQELIAKDLHGMKWRFRHIYR 92
Query: 134 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQS 193
GQPRRHLLTTGWS+F+ K+LV+GD +FLRG +GEL +GVR + ++ ++
Sbjct: 93 GQPRRHLLTTGWSSFINKKKLVSGDAVLFLRGNDGELRLGVRRAVQLKNEALLEAVNCTD 152
Query: 194 MHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGE 251
L +L+ ++++ +++F + + PR S+FI+ K+L+++N F+VG R+K+ E E
Sbjct: 153 SKLLMLSAVANSLDNRSIFHICFNPRVGASEFIVPYCKFLKSLNYHFSVGTRFKVGCENE 212
Query: 252 DSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP 310
D+ ER F G ++G+ + P HW SKW+SL ++WD + +RVSPW+IE +S +
Sbjct: 213 DANERSF-GLIIGISEVDPIHWPGSKWKSLLIKWDGATKYSHQNRVSPWDIEGVGSSVS- 270
Query: 311 NLVQPVLAKNKRPRLSMEVPPLDL 334
V L+ + R + PP DL
Sbjct: 271 --VTHRLSSSVSKRTKLCFPPSDL 292
>gi|125572056|gb|EAZ13571.1| hypothetical protein OsJ_03487 [Oryza sativa Japonica Group]
Length = 668
Score = 245 bits (625), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 135/325 (41%), Positives = 195/325 (60%), Gaps = 17/325 (5%)
Query: 21 LPSKILCRVVNIHLMAEQETDEV-----YAQITLLPEPSQNEPTTPDPCPADSPRPKVHS 75
LP + CRVV++ L + V Y + TL + E D R +H
Sbjct: 69 LPPHVACRVVDVELCVSEPLSLVVGFSLYLRGTLHGGGIEREDDMEDGDEERKSR-MLHM 127
Query: 76 FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQ 135
F K LTASDTSTHGGFSV R+ A +C PPLD Q P+QELVAKDLHG +WRF+HI+RGQ
Sbjct: 128 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDHKQLRPSQELVAKDLHGAKWRFRHIYRGQ 187
Query: 136 PRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMH 195
PRRHLLTTGWS+FV K+LV+GD +FLRG++GEL +GVR + ++ SS+S
Sbjct: 188 PRRHLLTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRATQLKNEAIFKAFSSESSK 247
Query: 196 LGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDS 253
+ L+ + ++ ++F + Y PR S++++ K++++ N+ +GMR+K FE ED
Sbjct: 248 MRTLSAVADSLKHGSVFHICYNPRATASEYVVPYWKFVKSFNHPVCIGMRFKFHFESEDV 307
Query: 254 PERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL 312
ERR SG + GV + P W SKWRSL V+W++ +RVSPWEIE + + ++
Sbjct: 308 NERR-SGMIAGVSEVDPIRWPGSKWRSLLVRWEDATDCNSQNRVSPWEIE--IVGGSISV 364
Query: 313 VQPVLAKNKR-----PRLSMEVPPL 332
+ A + + P+ +++VP L
Sbjct: 365 AHSLSASSSKRTKLCPQGNLDVPAL 389
>gi|224104635|ref|XP_002313508.1| predicted protein [Populus trichocarpa]
gi|222849916|gb|EEE87463.1| predicted protein [Populus trichocarpa]
Length = 690
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 215/663 (32%), Positives = 308/663 (46%), Gaps = 107/663 (16%)
Query: 20 RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQN-----------EPTTPDPCPADS 68
R+PS ILCRV + +A+ +TDEVYA+I +P P+ + D CP D
Sbjct: 51 RIPSLILCRVATVKFLADPDTDEVYAKIGFVPLPNTDLDFAHDRGLCGNGNDGDSCP-DK 109
Query: 69 PRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRF 128
P SF+K LT SD + GGFSV R A P LD + P Q ++AKD+HG W+F
Sbjct: 110 PA----SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSSDPPLQTVIAKDVHGEVWKF 165
Query: 129 KHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR-------CLARQQ 181
+HI+RG PRRHLLTTGWSTFV K+LVAGD+ VFLR ENG+L VG+R +R +
Sbjct: 166 RHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAENGDLRVGIRRSKRGIGIGSRPE 225
Query: 182 SSMPSS-----------------VISSQSMHLG------------VLATASHAVATQTMF 212
SS+ + + M G VL A A +
Sbjct: 226 SSLTTGWNSNNATCAIPYDGFSLFVKEDEMRNGGMKGRGRVKPEEVLEAAGLAANGKPFQ 285
Query: 213 VVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFS 269
VVYY PR+S +F + + A+ + GMR+KM FE EDS F GTV V+
Sbjct: 286 VVYY-PRSSTPEFCVKASSVRAAMRIGWCSGMRFKMAFETEDSSRISWFMGTVTSVQVAD 344
Query: 270 P-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRLSM 327
P W +S WR L+V WDEP + RVSPW +E + S P + + P K+ R
Sbjct: 345 PVRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVE--LVSNMPVIHLSPFSPPRKKSRFPQ 402
Query: 328 EVP-PLD----LPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSN 382
++ PLD LPS + P L S + LS ++ A H + S+
Sbjct: 403 QLGFPLDLQFQLPSFSGNP----LGPSSPMCCLS---DNTPAGIQGARHAQFGISLSDIQ 455
Query: 383 FMSRTQSDGEWLTS-----PRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDT 437
F ++ QS G +L+S P + S+ + N+NIS G+S P+
Sbjct: 456 FNNKQQS-GMFLSSLQRFNPHSRNSETYLTGHTNSNENISCL-LTMGNSNPN-------- 505
Query: 438 LLEQVETGRKTETGTSCRLFG--IELINHATSSAPSEKVPVSSLTTEGHIISTISAAADS 495
LE+ + +K + LFG I + H + S ++ VS + E + S+
Sbjct: 506 -LEKSDNVKKHQF----LLFGQPILIEQHISHSCSTDA--VSQVINERNSSDESSSKEK- 557
Query: 496 DGKSDIAKEFKEKKQEQVQ-----VSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLT 550
SD+ KK QV+ S +S S + + KV ++ VG LDL+
Sbjct: 558 --ISDVLLSAPGKKISQVKSCGTGFSWHQSLHNTSEIGKDTGPCKVFLESEDVGWTLDLS 615
Query: 551 TLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFIC 610
L Y+ L +L MF I+ + ++Y D G + +GD+P+ F KR+ I
Sbjct: 616 ALCSYEELHGKLANMFGIE---RSEMSSHVLYRDATGSVKQIGDEPFSVFMKTAKRLTIL 672
Query: 611 SSQ 613
+Q
Sbjct: 673 MNQ 675
>gi|19310546|gb|AAL85006.1| unknown protein [Arabidopsis thaliana]
Length = 1045
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 130/254 (51%), Positives = 175/254 (68%), Gaps = 8/254 (3%)
Query: 76 FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQ 135
F K LTASDTSTHGGFSV R+ A + P LD + P QELVAKD+H W F+HI+RGQ
Sbjct: 8 FCKTLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQ 67
Query: 136 PRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMH 195
P+RHLLTTGWS FV++KRL AGD+ +F+R +L +G+R RQQ ++ SSVISS SMH
Sbjct: 68 PKRHLLTTGWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMH 127
Query: 196 LGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDS 253
+GVLA A+HA A + F ++Y PR ++F++ L KY +A+ + ++GMR++M FE E+
Sbjct: 128 IGVLAAAAHANANNSPFTIFYNPRAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEEC 187
Query: 254 PERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL 312
RR+ GTV G+ D P WK+S+WR+L++ WDE A+ RP RVS W+IEP + TP
Sbjct: 188 GVRRYMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVL---TPFY 244
Query: 313 VQPVLAKNKRPRLS 326
+ P RPR S
Sbjct: 245 ICP--PPFFRPRFS 256
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 588
R+ TKVQ +G +VGR++D+ GYD L +L MF I+GQL + W++VY D E D
Sbjct: 918 RTYTKVQKRG-SVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHEND 976
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++LVGDDPW EF N V+ I I SS +V++MS
Sbjct: 977 ILLVGDDPWEEFVNCVQSIKILSSAEVQQMS 1007
>gi|255559342|ref|XP_002520691.1| transcription factor, putative [Ricinus communis]
gi|223540076|gb|EEF41653.1| transcription factor, putative [Ricinus communis]
Length = 634
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 134/313 (42%), Positives = 181/313 (57%), Gaps = 54/313 (17%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQN---- 56
MEQ+EA NQ+ +P++ LPSKI C+V+N+ L AE TDEV+AQITLLPE Q+
Sbjct: 74 MEQVEAYMNQDGKMEMPVYNLPSKIFCKVINVQLKAEAGTDEVFAQITLLPETKQDVLSL 133
Query: 57 -EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQE 115
E P P + + SFSK LT+SDTSTHGGFSVL++HA ECLPP+DM+ P Q
Sbjct: 134 KEDGNSLPLPR---KADLRSFSKKLTSSDTSTHGGFSVLKRHAEECLPPMDMSGEPPEQM 190
Query: 116 LVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR 175
LVAKD+H GENGEL +G+R
Sbjct: 191 LVAKDMH------------------------------------------GENGELRIGLR 208
Query: 176 CLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEA 233
+ S+ +SVIS+ SM G+L+ A HA+ T ++F VYY+P T ++FII ++Y+E+
Sbjct: 209 RAMKLHSNASTSVISAHSMQHGILSMAFHAITTGSIFTVYYRPWTNPTEFIIPFDQYVES 268
Query: 234 VNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFS-PHWKDSKWRSLKVQWDEPA-SIT 291
+++VG + M FE E+ E+R GT+VG ED W +S+WRSLK +WD +
Sbjct: 269 AELEYSVGTTFGMLFEVEECAEQRSEGTIVGNEDVDHIRWPNSEWRSLKAKWDATSEGFV 328
Query: 292 RPDRVSPWEIEPF 304
PDRVSPW I P
Sbjct: 329 HPDRVSPWMIVPI 341
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 47/73 (64%), Gaps = 3/73 (4%)
Query: 520 SQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL-HTRTKW 578
SQ K C +N S TKV G A GR++D+T GYD LI EL++MFD KG L + W
Sbjct: 539 SQCKNCCSFTNLSCTKVLKHGSA-GRSVDITKFDGYDKLIRELDQMFDFKGTLIDGSSGW 597
Query: 579 EIVYTDDEGDMML 591
E+ Y DDEGD+ML
Sbjct: 598 EVTY-DDEGDIML 609
>gi|255578143|ref|XP_002529941.1| Auxin response factor, putative [Ricinus communis]
gi|223530571|gb|EEF32449.1| Auxin response factor, putative [Ricinus communis]
Length = 709
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 216/663 (32%), Positives = 303/663 (45%), Gaps = 114/663 (17%)
Query: 20 RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCP-------ADSPRPK 72
R+PS +LCRV + +A+ ETDEVYA+I+L P PS NE D + K
Sbjct: 50 RIPSLVLCRVAGVKYLADSETDEVYAKISLFPLPS-NELDFGDEIGLCDTSTNGTNSTEK 108
Query: 73 VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIF 132
SF+K LT SD + GGFSV R A P LD + P Q +VAKD+HG W+F+HI+
Sbjct: 109 PTSFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVVAKDVHGEIWKFRHIY 168
Query: 133 RGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ-------QSSMP 185
RG PRRHLLTTGWSTFV K+LVAGD+ VFLR E+G+L VG+R R +SS P
Sbjct: 169 RGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAESGDLCVGIRRAKRGIGGGNGPESSPP 228
Query: 186 SSVISSQSM---HLG------------------------------VLATASHAVATQTMF 212
S ++ S + G VL +A+ A Q
Sbjct: 229 SGWTTNASCVNPYTGGFSLFLKEDESKGLRNGGGIRGKVRVKAEEVLESAALAANGQPFE 288
Query: 213 VVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFS 269
VVYY PR S +F + + + ++ GMR+KM FE EDS F GT+ V+
Sbjct: 289 VVYY-PRASTPEFCVKASSVRASTRIQWCSGMRFKMAFETEDSSRISWFMGTIASVQVAD 347
Query: 270 P-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRLSM 327
P W +S WR L+V WDEP + RVSPW +E + S P + + P K+ RL
Sbjct: 348 PIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE--LVSNMPVIHLSPFSPPRKKLRLPQ 405
Query: 328 EVP-PLD----LPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHH--KHSDFS-S 379
+ PLD LPS + P L S L LS DN A +H+ F S
Sbjct: 406 HLDFPLDGQFQLPSFSGNP----LGPSSPLCCLS--------DNTPAGIQGARHAQFGIS 453
Query: 380 NSNFMSRTQSDGEWLTS-----PRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPN 434
S+ G +L+S + S+ + + N+N+S G+S + K +
Sbjct: 454 LSDLQLNKLQSGLFLSSLQRFNSHSRVSESFMKSNTNSNENLSCLLTM-GNSNTNSEKSD 512
Query: 435 NDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAAD 494
N + V LFG ++ S VS ++S ++ +
Sbjct: 513 NVKRHQFV-------------LFGQPILTEQQISRSCSTDAVS------QVLSKKLSSDE 553
Query: 495 SDGKSDIAKEFKEKKQEQVQVSPKESQSK----QSCLTS----NRSRTKVQMQGVAVGRA 546
S K+ I ++ Q SP++S S QS T+ + KV ++ VGR
Sbjct: 554 SPEKAKIHDVLGSTPEK--QTSPEKSASTGLSWQSLHTTETGLDAGHCKVFLESEDVGRT 611
Query: 547 LDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKR 606
LDL+ L Y+ L L MF I+ + ++Y D G + GD+P+ F KR
Sbjct: 612 LDLSVLGSYEELYSRLANMFGIE---RSEMLHHVLYRDAAGAIRQTGDEPFSVFAKTAKR 668
Query: 607 IFI 609
+ I
Sbjct: 669 LTI 671
>gi|224132500|ref|XP_002328300.1| predicted protein [Populus trichocarpa]
gi|222837815|gb|EEE76180.1| predicted protein [Populus trichocarpa]
Length = 708
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 215/661 (32%), Positives = 305/661 (46%), Gaps = 113/661 (17%)
Query: 20 RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEP------SQNEPTTPDPCPADSPRPKV 73
R+PS +LCRV ++ +A+ TDEV+A+I+L+P P SQ+ D +++ K
Sbjct: 51 RIPSLVLCRVASVKFLADPGTDEVFAKISLVPLPDADLDISQDVDICGDGNDSNNAE-KP 109
Query: 74 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 133
SF+K LT SD + GGFSV R A P LD + P Q L+AKD+HG W+F+HI+R
Sbjct: 110 ASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTLIAKDVHGEVWKFRHIYR 169
Query: 134 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQS 193
G PRRHLLTTGWSTFV K+LVAGD+ VFLR ENG+L VG+R A++ + S SS S
Sbjct: 170 GTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAENGDLCVGIR-RAKRGVGIGSGPESSPS 228
Query: 194 MHLG---------------------------------------VLATASHAVATQTMFVV 214
H+G VL A A VV
Sbjct: 229 -HIGWNSNNATSANPYGGFSLSVKEDEMRNGGVKGRGRVKSEEVLEAAGLAANGNPFQVV 287
Query: 215 YYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP- 270
YY PR S +F + + A+ + GMR+KM FE EDS F GTV V+ P
Sbjct: 288 YY-PRASTPEFCVKASSVRAAMRTCWCSGMRFKMAFETEDSSRISWFMGTVASVQVADPD 346
Query: 271 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRLSMEV 329
W +S WR L+V WDEP + VSPW +E + S P + + P K+ R ++
Sbjct: 347 RWPNSPWRLLQVTWDEPDLLQTVKCVSPWLVE--LVSNMPVIHLSPFSPPRKKLRFPQQL 404
Query: 330 P-PLD----LPSAASAPWSARLAQSHNLTQLS-VTAEDKRIDNHVAWHHKHSDFSSNSNF 383
PLD LPS + P L S L LS T + H + SDF F
Sbjct: 405 DFPLDGQFQLPSFSGNP----LGPSSPLCCLSDNTPAGIQGARHAQFGISLSDF----QF 456
Query: 384 MSRTQSDGEWLTS-----PRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTL 438
+ QS G +L+S PR K S+ D NKN+S G S P
Sbjct: 457 KKKLQS-GLFLSSLQRFNPRTKNSENYPTGHPDSNKNLSCL-LTKGSSNPK--------- 505
Query: 439 LEQVETGRKTETGTSCRLFGIEL-----INHATSSAPSEKVPVSSLTTEGHIISTISAAA 493
LE+ + +K + LFG + I+H+ S+ +V + S+ +
Sbjct: 506 LEKSDNAKKHQF----LLFGQPILVEQQISHSCSADAFPQV----------VNERNSSDS 551
Query: 494 DSDGKSDI-----AKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALD 548
+ + SD+ K+ ++K S +S S + K ++ +GR LD
Sbjct: 552 NREKNSDVLRSAPGKQISQEKSCTTGFSWHQSLQNTSENGMDTGHCKAFLESEDLGRTLD 611
Query: 549 LTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIF 608
L+ L Y+ L +L MF I+ + ++Y D G + +GD+P+ F KR+
Sbjct: 612 LSALHSYEELRRKLAIMFGIE---RSDMLSHVLYRDVTGAVKQIGDEPFSVFMKTAKRLT 668
Query: 609 I 609
I
Sbjct: 669 I 669
>gi|242088483|ref|XP_002440074.1| hypothetical protein SORBIDRAFT_09g025500 [Sorghum bicolor]
gi|241945359|gb|EES18504.1| hypothetical protein SORBIDRAFT_09g025500 [Sorghum bicolor]
Length = 575
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 118/280 (42%), Positives = 170/280 (60%), Gaps = 23/280 (8%)
Query: 66 ADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYE 125
D + H F K LTASDTSTHGGFSV R+ A +C PPLD Q P+QEL+AKDLHG +
Sbjct: 21 GDGEKLTSHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYEQLRPSQELIAKDLHGMK 80
Query: 126 WRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMP 185
WRF+HI+RGQPRRHLLTTGWS+F+ K+LV+GD +FLRG +GEL +GVR + ++
Sbjct: 81 WRFRHIYRGQPRRHLLTTGWSSFINKKKLVSGDAVLFLRGSDGELRLGVRRAVQLKNEAL 140
Query: 186 SSVISSQSMHLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMR 243
++ L +L+ + ++ +++F + + PR S+FI+ K+L+ +N F++G R
Sbjct: 141 LEAVNCTDSKLLMLSAVASSLDNRSIFHICFNPRIGASEFIVPYCKFLKGLNYPFSIGTR 200
Query: 244 YKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 302
+K+ + ED+ ER F G + G+ + P W SKW+SL V+WD + +RVSPW+IE
Sbjct: 201 FKVGCKNEDANERSF-GLISGISEVDPIRWPGSKWKSLLVKWDGDTKYSHQNRVSPWDIE 259
Query: 303 PFVASAT-------------------PNLVQPVLAKNKRP 323
+S + NL P+L N RP
Sbjct: 260 RVGSSVSVTHCLSSCVSKRMKLCFPQGNLDAPILDGNGRP 299
>gi|225435334|ref|XP_002282437.1| PREDICTED: auxin response factor 18-like [Vitis vinifera]
Length = 711
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 213/657 (32%), Positives = 294/657 (44%), Gaps = 101/657 (15%)
Query: 20 RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPD-----PCPADSPRPKVH 74
R+P+ +LCRV + MA+ ETDEVYA+I L+P + NE D +++P K
Sbjct: 52 RIPALVLCRVAAVKFMADPETDEVYAKIRLVPI-ANNELDCEDDGVMGSSGSEAPE-KPA 109
Query: 75 SFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG 134
SF+K LT SD + GGFSV R A P LD + P Q ++AKD+HG W+F+HI+RG
Sbjct: 110 SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVIAKDVHGEIWKFRHIYRG 169
Query: 135 QPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVIS---- 190
PRRHLLTTGWSTFV K+LVAGD+ VFLR ENG+L VG+R R + P S
Sbjct: 170 TPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAENGDLCVGIRRAKRGIAGGPESPSGWNPA 229
Query: 191 --------------SQSMHLG-----------------------VLATASHAVATQTMFV 213
S+ M G V+ A+ A Q V
Sbjct: 230 SPYAGFPKFLREDESKLMRNGVGGNSNPGSGGGLRGGRRVRPESVVEAATLAANGQPFEV 289
Query: 214 VYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP 270
VYY PR S +F + + AV ++ GMR+KM FE EDS F GT+ V+ P
Sbjct: 290 VYY-PRASTPEFCVKASGVRSAVRIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVADP 348
Query: 271 -HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEV 329
W +S WR L+V WDEP + RVSPW +E + S P + L+ PR + +
Sbjct: 349 IRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE--LVSNMPII---HLSPFSPPRKKLRI 403
Query: 330 P-----PLDLPSAASAPWSARLAQSHNLTQL-SVTAEDKRIDNHVAWHHKHSDFSSNSNF 383
P P D S+ S L S L L T + H + SD N+
Sbjct: 404 PQHPDFPFDGQFPMSSFSSNPLGSSSPLCCLPDNTPAGIQGARHAQYGISLSDLHLNNKL 463
Query: 384 MSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVE 443
S G + TS FQ D + I+ +G T H + NN+++ +
Sbjct: 464 QS-----GLFPTS---------FQR-FDQHSRIT-----NGIITAH--RKNNESISCLLT 501
Query: 444 TGRKT--------ETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAAD- 494
G + E LFG ++ S VS + T S A
Sbjct: 502 MGNSSQNLEKSANEKTPQFLLFGQPILTEQQMSRTCSSDAVSQVLTGKSSSDGSSDKAKK 561
Query: 495 -SDGKSDIAKEFKEKKQEQVQVSPKESQSKQSC-LTSNRSRTKVQMQGVAVGRALDLTTL 552
SDG ++ K K + V Q Q+ + + KV M+ VGR+LDL+ L
Sbjct: 562 ISDGLGSTLEQ-KGKPENLSNVGFSWHQGFQTTEIGLDTGHCKVFMESEDVGRSLDLSVL 620
Query: 553 VGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 609
Y+ L L MF I+ + T ++Y D G + GD+P+ +F KR+ I
Sbjct: 621 GSYEELYTRLANMFGIE---RSETFSHVLYRDATGAVKHTGDEPFSDFTKKAKRLTI 674
>gi|242039347|ref|XP_002467068.1| hypothetical protein SORBIDRAFT_01g019130 [Sorghum bicolor]
gi|241920922|gb|EER94066.1| hypothetical protein SORBIDRAFT_01g019130 [Sorghum bicolor]
Length = 689
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 193/655 (29%), Positives = 287/655 (43%), Gaps = 88/655 (13%)
Query: 21 LPSKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQNEPTTPDPC----------PADSP 69
LP +LC V + +A+ ETDEV+A+I L+P P + E PD PAD+
Sbjct: 59 LPPLVLCAVTGVRFLADPETDEVFAKIRLVPLAPGEVEFREPDEFGLGVGGVGVDPADA- 117
Query: 70 RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFK 129
R K+ SF+K LT SD + GGFSV R A P LD P Q ++AKD+HG W+F+
Sbjct: 118 REKLSSFAKTLTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFR 177
Query: 130 HIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVI 189
HI+RG PRRHLLTTGWSTFV K+LVAGD+ VFLR E+GEL VG+R R +
Sbjct: 178 HIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRTEHGELCVGIRRAKRVSCGGMECMS 237
Query: 190 SSQSMHLGVLA-------------------------------TASHAVATQTMFVVYYKP 218
+ G L+ AS A + Q VVYY P
Sbjct: 238 GWNAPGYGALSAFLKDEEGKMIKGPGGYMRGRGKVKITDVVEAASLAASGQPFEVVYY-P 296
Query: 219 RTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKD 274
R S +F++ A+ N++ GMR+KM FE EDS F GT+ + P W +
Sbjct: 297 RASTPEFVVKAASVQNAMRNQWCPGMRFKMAFETEDSSRISWFMGTIASAQVADPIRWPN 356
Query: 275 SKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDL 334
S WR L+V WDEP + V+PW +E V+S P + P K+ L +
Sbjct: 357 SPWRLLQVTWDEPDLLQNVKCVNPWLVE-IVSSIPPIHLGPFSPPRKK---------LRM 406
Query: 335 PSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWL 394
P P+ +L L+ + + SD + +R G L
Sbjct: 407 PQHPDFPFDGQL--------LNPIFHGNPLGPSNSALRCFSDIAPAGIQGARHAQFGLPL 458
Query: 395 TSPRV-KFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTL--LEQVETGRKTETG 451
T ++ K LFQ + + P+H S P N+++ L + T + TE
Sbjct: 459 TDHQLSKLHLGLFQGGGFNRFDAITPPSHISKGFVISSAPVNESVSCLLTIGTPQATEKS 518
Query: 452 TSCR-----LFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFK 506
+ LFG ++ ++ + S ++ + SDG
Sbjct: 519 DDRKKPHIMLFGKPILTEQQMNSRGSRETFS---------PEVTGNSSSDGNVQKTGNVS 569
Query: 507 EKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF 566
+ + + + S L KV M+ VGR +DL+ Y+ L +L +MF
Sbjct: 570 DGSGSSICIGFSSQGHEASELGLEAGHCKVFMESEDVGRTIDLSVFGSYEELYGQLADMF 629
Query: 567 DI-KGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 620
I K ++ + + Y D G + G++P+ +F + +R+ I S + + P
Sbjct: 630 GIEKAEIMS----HLCYRDAAGAVKHTGEEPFSDFMKVARRLTIIESTEGRLQKP 680
>gi|225030804|gb|ACN79515.1| auxin response factor 3a [Lotus japonicus]
Length = 679
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 133/346 (38%), Positives = 187/346 (54%), Gaps = 78/346 (22%)
Query: 10 QELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP 69
Q+L +P +P + CRVV++ L AE+ +DEVY Q+ L+PE Q + +
Sbjct: 75 QDLQLLLP--NIPPHVFCRVVDVKLHAEEGSDEVYCQVLLVPESEQVQQKLQEGEVDADG 132
Query: 70 RPKV-----------HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
+ H F K LTASDTSTHGGFSV R+ A +C PPLD +Q P+QELVA
Sbjct: 133 EEEEDTETMMKSSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVA 192
Query: 119 KDLHGYEWRFKHIFRG--------QPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGEL 170
KDLHG EW+F+HI+RG QPRRHLLTTGWS FV K+LV+GD +FLR
Sbjct: 193 KDLHGREWKFRHIYRGVSLMSHVWQPRRHLLTTGWSGFVNKKKLVSGDAVLFLR------ 246
Query: 171 HVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKY 230
A+ + F+V ++K+
Sbjct: 247 ------------------------------------ASSSEFIV-----------PIHKF 259
Query: 231 LEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPAS 289
L++++ ++ GMR++MRFE +D+ ERR +G +VG+ D P W SKW+ L V+WD+
Sbjct: 260 LKSLDYSYSAGMRFRMRFETDDAAERRCAGLIVGITDVDPVRWPGSKWKCLLVRWDD-LE 318
Query: 290 ITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLP 335
TR +RVSPWEIEP +++ PN + + A KR R+ + L+ P
Sbjct: 319 ATRNNRVSPWEIEPSGSASIPNNL--MAASLKRTRIGLPSTQLEFP 362
>gi|379323196|gb|AFD01297.1| auxin response factor 3-2 [Brassica rapa subsp. pekinensis]
Length = 552
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 121/299 (40%), Positives = 169/299 (56%), Gaps = 51/299 (17%)
Query: 18 LFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPC-----PADSPRPK 72
++ LP + CR++++ L AE +TDEVYAQ++LLPE E + D +
Sbjct: 89 IYGLPPHVFCRILDVKLHAETDTDEVYAQVSLLPESEDIERKLREGVIDVVDGGDQEDYE 148
Query: 73 V-------HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYE 125
V H F K LTASDTSTHGGFSV R+ A +C PPLD ++ P+QEL+A+DLHG E
Sbjct: 149 VVKRSNTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSKPRPSQELLARDLHGLE 208
Query: 126 WRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMP 185
WRF+HI+RGQPRRHLLTTGWS FV K+LV+GD +FLRG++G+L +GVR ++ + +
Sbjct: 209 WRFRHIYRGQPRRHLLTTGWSGFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQFEGASA 268
Query: 186 SSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYK 245
S +Q+ + + +HA++T + F +YY P++
Sbjct: 269 FSAQYNQNTNHNNFSEVAHAISTNSAFNIYYNPKS------------------------- 303
Query: 246 MRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEP 303
G + G+ D P W SKWR L V+WD+ + RVSPWEIEP
Sbjct: 304 -------------LGIITGISDLDPIRWPGSKWRCLIVRWDDNEANRHQQRVSPWEIEP 349
>gi|224097892|ref|XP_002311089.1| predicted protein [Populus trichocarpa]
gi|222850909|gb|EEE88456.1| predicted protein [Populus trichocarpa]
Length = 671
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 201/643 (31%), Positives = 283/643 (44%), Gaps = 80/643 (12%)
Query: 19 FRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADS---------P 69
F++P+ I C+V I MAE ETDEVYA+I L P S ++ D C DS
Sbjct: 50 FQIPALIPCKVSAIKYMAEPETDEVYAKIRLTPS-SNSDLMFGDGCGEDSDDRLPNGIES 108
Query: 70 RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFK 129
+ K SF+K LT SD + GGFSV R A P LD P Q ++AKD+HG W+F+
Sbjct: 109 QEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTILAKDVHGETWKFR 168
Query: 130 HIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR--QQSSMPSS 187
HI+RG PRRHLLTTGWS FV K+LVAGD+ VFLR ENG+L VG+R R + SS
Sbjct: 169 HIYRGTPRRHLLTTGWSNFVNQKKLVAGDSIVFLRAENGDLCVGIRRAKRGIGGGNECSS 228
Query: 188 VISSQSMHLG--------------------------VLATASHAVATQTMFVVYYKPRTS 221
+S + G V+ AS A Q VVYY PR S
Sbjct: 229 GWNSFGGYSGFLREDESKLTRRNGNGDMKGKVKPESVIEAASLAANGQPFEVVYY-PRAS 287
Query: 222 --QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKW 277
+F + + A++ ++ GMR+KM FE EDS F GT+ V+ P W +S W
Sbjct: 288 TPEFCVRASAVRTAMHIQWCPGMRFKMAFETEDSSRISWFMGTISSVQFADPIRWPNSPW 347
Query: 278 RSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVP-PLDLPS 336
R L+V WDEP + RVSPW +A N+ L+ PR + +P P D P
Sbjct: 348 RLLQVAWDEPDLLQNVKRVSPW-----LAELVSNMPAIHLSPFSPPRKKLRLPQPPDFPL 402
Query: 337 AASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSD------ 390
P + D H + SS+ ++ QS
Sbjct: 403 LGQIPMPSFTGIPLRSNSPLCCVSDNIPAGIQGARHAQFELSSSDLHFNKLQSGLFPVDF 462
Query: 391 --GEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKT 448
+ SP + S F ++NIS S +L E ET KT
Sbjct: 463 QRRDHAASPS-RISSGNFMGNTKKSENISCLLTMGNSS---------QSLKESSET--KT 510
Query: 449 ETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEK 508
LFG ++ SS ++ +++G++ A SDG ++
Sbjct: 511 PHFV---LFGQLIVTDQQSSQSCSGDTNANSSSDGNL-----GKASSDGSGSALQQNGPM 562
Query: 509 KQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI 568
+ + S +++ L KV ++ +GR LDL+ L Y+ L +L MF I
Sbjct: 563 ENSSDERSTWYKDHQKTDLGLETDHCKVFLESEDIGRTLDLSVLGSYEELHRKLASMFGI 622
Query: 569 KGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICS 611
+ + ++Y D G GD+P+ EF +R+ I S
Sbjct: 623 E---SSEMLSNVLYRDAAGATKHAGDEPFSEFLKTARRLTILS 662
>gi|115464877|ref|NP_001056038.1| Os05g0515400 [Oryza sativa Japonica Group]
gi|113579589|dbj|BAF17952.1| Os05g0515400 [Oryza sativa Japonica Group]
Length = 587
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 113/275 (41%), Positives = 177/275 (64%), Gaps = 6/275 (2%)
Query: 64 CPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHG 123
C A+ H F K LTASDTSTHGGFSV R+ A +C PPLD P+QEL+A DLHG
Sbjct: 21 CDAEKKPRMPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKTVRPSQELIAVDLHG 80
Query: 124 YEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSS 183
+W+F+HI+RGQPRRHLLT GWS+FV K+LV+GD +FLRG++G+L +GVR + ++
Sbjct: 81 TQWKFRHIYRGQPRRHLLTIGWSSFVNRKKLVSGDAVLFLRGDDGQLRLGVRRAVQLRNE 140
Query: 184 MPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVG 241
++S L +L++ + ++ +++F + + PR+ S+FI+ + L+++N+ F++G
Sbjct: 141 ALFEPVNSSDSKLRILSSVASSLENKSVFHICFNPRSGASEFIVPYWRLLKSLNHPFSIG 200
Query: 242 MRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWE 300
MR+++ +E ED+ ER +G + G+ + P W S+W+ L V+WD+ + +RVSPWE
Sbjct: 201 MRFRVCYESEDANERS-AGLISGISEVDPIRWPGSRWKCLLVRWDDSTDSSHQNRVSPWE 259
Query: 301 IEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLP 335
IE S + + + + +KR +L LD P
Sbjct: 260 IERVGGSVS--VTHSLSSGSKRTKLHFPQGSLDTP 292
>gi|222632222|gb|EEE64354.1| hypothetical protein OsJ_19194 [Oryza sativa Japonica Group]
Length = 588
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 113/275 (41%), Positives = 177/275 (64%), Gaps = 6/275 (2%)
Query: 64 CPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHG 123
C A+ H F K LTASDTSTHGGFSV R+ A +C PPLD P+QEL+A DLHG
Sbjct: 22 CDAEKKPRMPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKTVRPSQELIAVDLHG 81
Query: 124 YEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSS 183
+W+F+HI+RGQPRRHLLT GWS+FV K+LV+GD +FLRG++G+L +GVR + ++
Sbjct: 82 TQWKFRHIYRGQPRRHLLTIGWSSFVNRKKLVSGDAVLFLRGDDGQLRLGVRRAVQLRNE 141
Query: 184 MPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVG 241
++S L +L++ + ++ +++F + + PR+ S+FI+ + L+++N+ F++G
Sbjct: 142 ALFEPVNSSDSKLRILSSVASSLENKSVFHICFNPRSGASEFIVPYWRLLKSLNHPFSIG 201
Query: 242 MRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWE 300
MR+++ +E ED+ ER +G + G+ + P W S+W+ L V+WD+ + +RVSPWE
Sbjct: 202 MRFRVCYESEDANERS-AGLISGISEVDPIRWPGSRWKCLLVRWDDSTDSSHQNRVSPWE 260
Query: 301 IEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLP 335
IE S + + + + +KR +L LD P
Sbjct: 261 IERVGGSVS--VTHSLSSGSKRTKLHFPQGSLDTP 293
>gi|225439992|ref|XP_002281486.1| PREDICTED: auxin response factor 18-like [Vitis vinifera]
Length = 701
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 206/663 (31%), Positives = 288/663 (43%), Gaps = 110/663 (16%)
Query: 20 RLPSKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSK 78
R+P+ I CRV + MA+ E+DEVYA+ITL+P S+++ + K SF+K
Sbjct: 62 RIPAYIPCRVSAMKFMADPESDEVYAKITLVPLNGSESDYDDDGYGNGTESQEKPASFAK 121
Query: 79 VLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRR 138
LT SD + GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG PRR
Sbjct: 122 TLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQNILAKDVHGETWKFRHIYRGTPRR 181
Query: 139 HLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSS------VISSQ 192
HLLTTGWSTFV K+L+AGD+ VFLR ENG+L VG+R R P S +
Sbjct: 182 HLLTTGWSTFVNHKKLIAGDSIVFLRAENGDLCVGIRRAKRGIGCGPESSSGWNPAGCNY 241
Query: 193 SMHLG--------------------------------------VLATASHAVATQTMFVV 214
M G V+ AV Q V+
Sbjct: 242 VMPYGGFSAFLREDENKLTRNGNGGSSGSNGSFFGRVKVTAEAVIEAVRLAVNGQPFEVI 301
Query: 215 YYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP- 270
YY PR S +F + + A ++ GMR+KM FE EDS F GT+ V+ P
Sbjct: 302 YY-PRASTPEFCVKSSLVKSASQIRWCSGMRFKMAFETEDSSRISWFMGTISSVQVADPV 360
Query: 271 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVP 330
W DS WR L+V WDEP + RVSPW +E + S P++ L PR + P
Sbjct: 361 RWPDSPWRLLQVTWDEPDLLQNVKRVSPWLVE--LVSNMPSI---HLTHFSPPRKKLRFP 415
Query: 331 -----PLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMS 385
PLD + S + S+ LS DN A +
Sbjct: 416 QYPDFPLDAQFSMPTFSSNLVGPSNPFGCLS--------DNIPAGMQG-----------A 456
Query: 386 RTQSDGEWLTSP-RVKFSQQLFQEAIDDNKNISAWPAHSGH--STPHPSKPNNDTLL--- 439
R G L+ P KF LF + + P S S S N +LL
Sbjct: 457 RHAQYGLSLSDPHHNKFQSGLFPAPFPQLDHPATPPKASNDYVSRKRSSSENVSSLLTIA 516
Query: 440 EQVETGRKTET-GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGK 498
+ ET +K++ T LFG ++ S VS + I+ + S+G
Sbjct: 517 QSTETSKKSDDRKTGFTLFGRSILTEQQMSQSCSGDTVSPV---------ITGNSSSEGN 567
Query: 499 SDIAKEFKEKKQEQVQVS--PKES--QSKQSCLTSNR--------SRTKVQMQGVAVGRA 546
D F + + P+ S + Q+ ++R KV M+ VGR
Sbjct: 568 QDKMANFSDGSGSALHQHGLPEHSSCEGYQTYKVNHRETEPNLETGHCKVFMESEDVGRT 627
Query: 547 LDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKR 606
LDL+ L YD L +L +MF I+ + + ++Y D G + +GD+P+ +F KR
Sbjct: 628 LDLSLLTSYDELCGKLAKMFTIE---DSEMRNHVLYRDATGAVKHIGDEPFSDFTKTAKR 684
Query: 607 IFI 609
+ I
Sbjct: 685 LTI 687
>gi|147857971|emb|CAN80371.1| hypothetical protein VITISV_014723 [Vitis vinifera]
Length = 1096
Score = 228 bits (582), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 141/329 (42%), Positives = 198/329 (60%), Gaps = 37/329 (11%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQN-EPT 59
EQ+ AS ++++ +IP + LPS++LC + N+ L A+ ETDEVYAQ+TL P P+ + E
Sbjct: 57 EQVAASMKKDVDAQIPNYPNLPSRLLCILHNVTLHADPETDEVYAQMTLQPVPAYDKESL 116
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
+ +P+ F K LTASDTSTHGGFSV R+ A + PPLD + P QELVAK
Sbjct: 117 LRSDLALKTNKPQTDFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVAK 176
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH W F+HI+RG R E +L +G+R R
Sbjct: 177 DLHDNVWTFRHIYRG-----------------------------RDEKQQLLLGIRRANR 207
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NN 236
Q +++ SSV+SS SMH+G+LA A+HA A + F V+Y PR S+F+I L KY +A +N
Sbjct: 208 QPTNLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVIPLAKYYKAAYSN 267
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 295
+ ++GMR++M FE E+S RR+ GT+ G+ D P WK+S+WR+L+V WDE + R +R
Sbjct: 268 QISLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGERRNR 327
Query: 296 VSPWEIEPFVASATPNLVQPVLAKNKRPR 324
VS WEIEP A + P ++KRPR
Sbjct: 328 VSIWEIEPVTAPFF--ICPPPFFRSKRPR 354
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 59/87 (67%), Gaps = 3/87 (3%)
Query: 535 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGDMMLV 592
KV +G AVGR++D+T GYD L +L F I+GQL R + W++VY D E D++LV
Sbjct: 988 KVYKRG-AVGRSIDITRYSGYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDHENDVLLV 1046
Query: 593 GDDPWHEFCNMVKRIFICSSQDVKKMS 619
GDDPW EF N V+ I I S Q+V++MS
Sbjct: 1047 GDDPWEEFVNCVRCIKILSPQEVQQMS 1073
>gi|85069283|gb|ABC69713.1| ETTb [Nicotiana tabacum]
Length = 336
Score = 228 bits (582), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 113/244 (46%), Positives = 157/244 (64%), Gaps = 6/244 (2%)
Query: 95 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 154
R+ A +C PPLD Q P+QELVAKDLHG EW+F+HI+RGQPRRHLLTTGWS FV K+L
Sbjct: 2 RRAAEDCFPPLDYRQQRPSQELVAKDLHGIEWKFRHIYRGQPRRHLLTTGWSAFVNKKKL 61
Query: 155 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 214
V+GD +FLR +GEL +GVR A+ ++ SQ +++ + +A+++ F +
Sbjct: 62 VSGDAVLFLRTADGELRLGVRRAAQAKTCSNYLAAYSQLLNVSGIVDVVNAISSTNAFSI 121
Query: 215 YYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-H 271
Y PR +S FII +K+ + + + F+ GMR+KMR E ED+ E+RF+G VVGV D P
Sbjct: 122 CYNPRASSSGFIIPYHKFSKTLAHPFSAGMRFKMRVETEDAAEQRFTGLVVGVSDVDPVR 181
Query: 272 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPP 331
W SKWR L V+WD+ ++R +RVSPWEIEP + + P V+ KR R+ +
Sbjct: 182 WPGSKWRCLLVRWDD-LDVSRHNRVSPWEIEP--SGSAPVSSSLVMPSAKRTRVGFPITK 238
Query: 332 LDLP 335
D P
Sbjct: 239 ADFP 242
>gi|224113039|ref|XP_002316370.1| predicted protein [Populus trichocarpa]
gi|222865410|gb|EEF02541.1| predicted protein [Populus trichocarpa]
Length = 669
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 197/643 (30%), Positives = 282/643 (43%), Gaps = 82/643 (12%)
Query: 19 FRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADS---------P 69
F++P+ I C+V I MA+ ETDEVYA+I L+P + ++ C D+
Sbjct: 50 FQIPALIPCKVSAIKYMADPETDEVYAKIRLIPL-NNSDLMLGHGCGEDNDDRLHSGNES 108
Query: 70 RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFK 129
+ K SF+K LT SD + GGFSV R A P LD P Q ++AKD+HG W+F+
Sbjct: 109 QEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTILAKDVHGETWKFR 168
Query: 130 HIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ-QSSMPSSV 188
HI+RG PRRHLLTTGWS FV K+LVAGD+ VFLR ENG+L VG+R R + SS
Sbjct: 169 HIYRGTPRRHLLTTGWSNFVNQKKLVAGDSIVFLRAENGDLCVGIRRAKRGIGGNECSSG 228
Query: 189 ISSQSMHLG--------------------------VLATASHAVATQTMFVVYYKPRTS- 221
+S + + G V+ AS A Q VYY PR S
Sbjct: 229 WNSFAGYSGFFREDESKLMRRNGNGDMKGKVKAESVIEAASLAANGQPFEAVYY-PRAST 287
Query: 222 -QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWR 278
+F + + A+ ++ GMR+KM FE EDS F GT+ V+ P W +S WR
Sbjct: 288 PEFCVKASAVRSAIQIQWCPGMRFKMAFETEDSSRISWFMGTISSVQVADPIRWPNSPWR 347
Query: 279 SLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVP-PLDLPSA 337
L+V WDEP + RVSPW +E N+ L+ PR + +P P D P
Sbjct: 348 LLQVAWDEPDLLHNVKRVSPWLVE-----LVSNMPAIHLSPFSPPRKKLRLPQPPDFPLL 402
Query: 338 ASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQS-----DGE 392
P + D H SS+ ++ Q+ D +
Sbjct: 403 GQIPMPSFTGNPLRSNSPLCCVSDNIPAGIQGARHAQFGLSSSDLHFNKLQAGLFPVDFQ 462
Query: 393 WL--TSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTET 450
L +P + S F ++++IS S Q G T+T
Sbjct: 463 RLDRAAPPSRISNSNFVGNTQNSESISCLLTMGNSS--------------QGMKGSDTKT 508
Query: 451 GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 510
LFG ++ SS ++ +++GH A SDG +++ +
Sbjct: 509 -PHILLFGQLIVTDQQSSQSCSGDTNANSSSDGH-----PGKAISDGSGSASQQNGPLEN 562
Query: 511 EQVQVSP--KESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI 568
P K+ Q L + KV M+ VGR LDL+ L Y+ L +L MF I
Sbjct: 563 SSGGRCPWYKDYQKTDPGLET--GHCKVFMESEDVGRTLDLSVLGSYEELHRKLVNMFGI 620
Query: 569 KGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICS 611
+ + ++Y + G GD+P+ EF +R+ I S
Sbjct: 621 E---SSEMLSNVLYRNAAGATKHAGDEPFSEFLKTARRLTILS 660
>gi|359359022|gb|AEV40929.1| putative auxin response factor [Oryza punctata]
Length = 973
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 140/346 (40%), Positives = 190/346 (54%), Gaps = 70/346 (20%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ A+T + N RIP + LPS++LC+V NI L A+++TDEVYAQ+TL P S+ +
Sbjct: 67 EQVAATTRKIPNSRIPNYPNLPSQLLCQVHNITLHADKDTDEVYAQMTLQPVNSETD-VF 125
Query: 61 PDPCPADSPRPK--VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVA 118
P P + K F K LTASDTSTHGGFSV R+ A + P LD + P QEL+
Sbjct: 126 PIPTLGAYTKSKHPTEYFCKNLTASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIV 185
Query: 119 KDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLA 178
+DLH W F+HI+RGQP+RHLLTTGWS FV +KRL AGD+ +F+R
Sbjct: 186 RDLHDNMWTFRHIYRGQPKRHLLTTGWSLFVGAKRLKAGDSVLFIR-------------- 231
Query: 179 RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKF 238
+ PS + I + +Y +A +
Sbjct: 232 ----TSPSPFV-----------------------------------IPVARYNKATYMQP 252
Query: 239 AVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVS 297
+VGMR+ M FE E+S +RR++GTVVG+ D+ P W +SKWR+L+V+WDE RP+RVS
Sbjct: 253 SVGMRFAMMFETEESSKRRYTGTVVGISDYDPMRWPNSKWRNLQVEWDEHGYGERPERVS 312
Query: 298 PWEIEPFVASATP--NLVQPVLAKNKR----PRLSMEVPPLDLPSA 337
W+IE TP LV P N + P + VP L++ SA
Sbjct: 313 IWDIE------TPENTLVFPSSTLNSKRQCLPGYGVSVPGLEIGSA 352
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 62/96 (64%), Gaps = 3/96 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 588
R+ TKVQ QG +VGR++D+T Y L + MF ++G+L ++W++VY D E D
Sbjct: 797 RTYTKVQKQG-SVGRSIDVTGFRNYHELRSAIACMFGLQGKLEHPGSSEWKLVYVDYEND 855
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 624
++LVGDDPW EF N V+ I I S +V++M G +L
Sbjct: 856 VLLVGDDPWEEFINCVRCIRILSPSEVQQMRVGMQL 891
>gi|356570756|ref|XP_003553551.1| PREDICTED: auxin response factor 18-like [Glycine max]
Length = 688
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 204/664 (30%), Positives = 286/664 (43%), Gaps = 118/664 (17%)
Query: 20 RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPC----PADSPRPKVHS 75
++P I C+V I MA+ ETDEVY ++ L+P ++NE D + K S
Sbjct: 58 KIPPFIQCKVGAIKYMADPETDEVYVKLRLVPL-TRNEGDFEDDAVGGINGSENKDKSPS 116
Query: 76 FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQ 135
F+K LT SD + GGFSV R A P LD + P Q ++AKD+HG W+F+HI+RG
Sbjct: 117 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQNILAKDVHGETWKFRHIYRGT 176
Query: 136 PRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQS------------- 182
PRRHLLTTGWS+FV K+LVAGD+ VFLR E +L VG+R R
Sbjct: 177 PRRHLLTTGWSSFVNHKKLVAGDSIVFLRAEKDDLRVGIRRAKRGIGIGGGPEAPAGWNS 236
Query: 183 -----SMPSSVIS-------SQSMHLG-------------VLATASHAVATQTMFVVYYK 217
MP S SQ + G V+ A+ A Q VVYY
Sbjct: 237 GGGIRPMPYGGFSAFLREEDSQLLRNGLSPNAKGKVRPEAVIEAATLAANMQPFEVVYY- 295
Query: 218 PRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSPHWKD 274
PR S +F + N A+ ++ GMR+KM FE EDS F GT+ V P W +
Sbjct: 296 PRASAPEFCVKANLVRAALQVRWCPGMRFKMPFETEDSSRISWFMGTISSVNFADPRWPN 355
Query: 275 SKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRLSMEVPPLD 333
S WR L+V WDEP + RVSPW +E + S P + + + K+PR P
Sbjct: 356 SPWRLLQVTWDEPELLQNVKRVSPWLVE--IVSNMPTIHLSHYSTQQKKPRFPQH-PDFS 412
Query: 334 LPSAASAPW--SARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDG 391
S P S L S+ L AE A H + SN +F
Sbjct: 413 FDGQISLPAFPSNFLGPSNPFGCL---AESTPAGIQGARHANYGISLSNLHFN------- 462
Query: 392 EWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETG 451
K LFQ P S NN +++V TG
Sbjct: 463 --------KLQSGLFQAGFP--------PLDHTASPVLRVSSNNAATMQKVGTGDN---- 502
Query: 452 TSCRLFGIELINHATSSAPSEKVP----------VSSLTTEGHIISTISAAADS------ 495
SC L++ +T++ PS+KV ++ TE I SA D
Sbjct: 503 VSC------LLSMSTATQPSKKVDDVKAPQLVLFGQTILTEQQISLNTSAKTDPTRNNSF 556
Query: 496 DGKSDIAKEFKE--------KKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRAL 547
DG +D +F + + ++ + Q K++ + KV M+ +GR +
Sbjct: 557 DGNADKMCKFSDGFGYALHPQGSSLERLQWYKDQQKETMASLETGHCKVFMESEDIGRTM 616
Query: 548 DLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPW--HEFCNMVK 605
DLT L YD L +L +MF I+ + ++Y D G + +GD+ + EF +
Sbjct: 617 DLTMLGSYDELYRKLADMFGIEKSVVLS---HMLYRDTTGAVKHIGDEAFSCSEFTKTAR 673
Query: 606 RIFI 609
R+ I
Sbjct: 674 RLTI 677
>gi|85069281|gb|ABC69712.1| ETTa [Nicotiana tabacum]
Length = 336
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 112/244 (45%), Positives = 156/244 (63%), Gaps = 6/244 (2%)
Query: 95 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 154
R+ A +C PPLD Q P+QELVAKDLHG EW+F+HI+RGQPRRHLLTTGWS FV K+L
Sbjct: 2 RRAAEDCFPPLDYRQQRPSQELVAKDLHGIEWKFRHIYRGQPRRHLLTTGWSAFVNRKKL 61
Query: 155 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 214
V+GD +FLR +GEL +GVR A+ ++ SQ +++ + A+++ F +
Sbjct: 62 VSGDAVLFLRTADGELRLGVRRAAQAKTCSNYLAAYSQLLNVSGIVDVVKAISSTNAFSI 121
Query: 215 YYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-H 271
Y PR +S FI+ +K+ + + + F+ GMR+KMR E ED+ E+RF+G VVGV D P
Sbjct: 122 CYNPRASSSGFILPYHKFSKTLAHPFSAGMRFKMRVETEDAAEQRFTGLVVGVSDVDPVR 181
Query: 272 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPP 331
W SKWR L V+WD+ ++R +RVSPWEIEP + + P V+ KR R+ +
Sbjct: 182 WPGSKWRCLLVRWDD-LDVSRHNRVSPWEIEP--SGSAPVSSSLVMPSAKRTRVGFPITK 238
Query: 332 LDLP 335
D P
Sbjct: 239 ADFP 242
>gi|357140673|ref|XP_003571888.1| PREDICTED: auxin response factor 22-like [Brachypodium distachyon]
Length = 705
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 206/667 (30%), Positives = 284/667 (42%), Gaps = 119/667 (17%)
Query: 21 LPSKILCRVVNIHLMAEQETDEVYAQITLLP----EPSQNEPTTPDPCPADSPRPKVHSF 76
LP+ +LC V + +A+ ETDEV+A+I L+P E + EP P A++ + K+ SF
Sbjct: 82 LPALVLCSVAGVRFLADPETDEVFAKIRLVPVGPDEVAFREPEGLGPLEAEA-QEKLASF 140
Query: 77 SKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQP 136
+K LT SD + GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG P
Sbjct: 141 AKTLTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIYRGTP 200
Query: 137 RRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHL 196
RRHLLTTGWSTFV K+LVAGD+ VFLR E+GEL VG+R R V +
Sbjct: 201 RRHLLTTGWSTFVNQKKLVAGDSIVFLRTEHGELCVGIRRAKRVTCGGMECVSGWNAPGY 260
Query: 197 G-------------------------------VLATASHAVATQTMFVVYYKPRTS--QF 223
G V+ AS A Q VVYY PR S +F
Sbjct: 261 GGFSAFLKDEENKMMNSTGGYLKGRGKLKIADVVEAASLAANGQPFEVVYY-PRASTPEF 319
Query: 224 IISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLK 281
++ A+ + GMR+KM FE EDS F GT+ V+ P W +S WR L+
Sbjct: 320 VVKAASMQAAMRIHWCPGMRFKMAFETEDSSRISWFMGTISSVQVADPIRWPNSPWRLLQ 379
Query: 282 VQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAP 341
V WDEP + VSPW +E V+S P + P K+ L +P P
Sbjct: 380 VSWDEPDLLQNVKCVSPWLVE-LVSSIPPIHLGPFSPPRKK---------LRVPQHPDFP 429
Query: 342 WSARLAQS-HNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRV- 399
+ L + L + R + D S +R G LT ++
Sbjct: 430 FDGHLFNPIFHGNPLGPSNSSLRC---------YPDNSPAGIQGARHAQFGLPLTDHQLN 480
Query: 400 KFSQQLFQEA-------------IDDNKNISAWPAHSGHS------TPHPSKPNNDTLLE 440
K LFQ I IS+ PAH S TP ++ ++D
Sbjct: 481 KLHLGLFQGGGFNRLDALTPSSRIPKGCMISSAPAHDSVSCLLTIGTPQSTEKSDD---- 536
Query: 441 QVETGRKTETGTSCRLFGIELIN--HATSSAPSEKVPVSSLTTEGHIISTISAAADSDGK 498
RKT LFG ++ TSS + + + + A SDG
Sbjct: 537 -----RKT---PHIMLFGKAILTEQQMTSSGSRDTLSSGATANSSPYGNAPKAGNTSDGS 588
Query: 499 -SDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDH 557
S I F + E + K V M+ VGR +DL+ V Y+
Sbjct: 589 GSSICIGFSSQGHESSDFGLEAGHCK------------VFMESEDVGRTIDLSDFVSYEE 636
Query: 558 LIDELEEMFDIKGQLHTRTKWEIV----YTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQ 613
L L +MF I+ K EI+ Y D G +M G+ P+ +F + +R+ I S
Sbjct: 637 LYGRLADMFGIE-------KEEIISHLRYRDTAGTVMHTGELPFSDFMKVARRLTIISGD 689
Query: 614 DVKKMSP 620
+ P
Sbjct: 690 SGRLPKP 696
>gi|308044209|ref|NP_001183794.1| hypothetical protein [Zea mays]
gi|238014578|gb|ACR38324.1| unknown [Zea mays]
gi|413952427|gb|AFW85076.1| hypothetical protein ZEAMMB73_374158 [Zea mays]
Length = 340
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 119/273 (43%), Positives = 166/273 (60%), Gaps = 14/273 (5%)
Query: 21 LPSKILCRVVNIHLMAEQETDEVYAQITLLPE----------PSQNEPTTPDPCPADSPR 70
LP ++CRV ++ L A+ TDEV A++ L+ E + A+
Sbjct: 63 LPPHVVCRVADVELCADAATDEVCARLALVAEGEAFGRNLGGGGVEGDDGMEDFDAERKS 122
Query: 71 PKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKH 130
+H F K LTASDTSTHGGFSV R+ A +C PPLD NQ P+QELVAKDLHG +W+F+H
Sbjct: 123 GMLHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYNQLRPSQELVAKDLHGAKWKFRH 182
Query: 131 IFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVIS 190
I+RGQPRRHLLTTGWS+FV K+LV+GD +FLRG++GEL +GVR + ++ +
Sbjct: 183 IYRGQPRRHLLTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAIQLKNEALFEDFN 242
Query: 191 SQSMHLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRF 248
S S L + ++ +++F + Y PR S++II K+L+++N+ +G R +
Sbjct: 243 SDSTKRHSLTAVADSLKNRSVFHISYNPRATASEYIIPYAKFLKSLNHPVCIGARINFQC 302
Query: 249 EGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSL 280
ED ERR SG VV + + P W SKWRSL
Sbjct: 303 HNEDVSERR-SGVVVRISEIDPMKWPGSKWRSL 334
>gi|206572097|gb|ACI13681.1| putative auxin response factor ARF16 [Malus x domestica]
Length = 702
Score = 225 bits (574), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 205/672 (30%), Positives = 286/672 (42%), Gaps = 124/672 (18%)
Query: 20 RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQ------------NEPTTPDPCPAD 67
R+P+ ILCRV I MA+ TDEVYA+I L+P N TPD
Sbjct: 62 RVPAHILCRVAAIKFMADPGTDEVYAKIRLVPLNGAEAGYEDDGIGGLNGTETPD----- 116
Query: 68 SPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWR 127
K SF+K LT SD + GGFSV R A P LD + P Q ++AKD+HG W+
Sbjct: 117 ----KPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWK 172
Query: 128 FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ------- 180
F+HI+RG PRRHLLTTG STFV K+LV+GD+ VFLR ENG+L VG+R R
Sbjct: 173 FRHIYRGTPRRHLLTTGSSTFVNHKKLVSGDSIVFLRAENGDLCVGIRRAKRGIGGGSES 232
Query: 181 ---------QSSMPSSVIS--------------------SQSMHLG--------VLATAS 203
++P S S +G V A+
Sbjct: 233 SSGWNPMGGNCTVPYGGFSAFLREDENKLMKNGHGNGSNSNGSLMGKGKVGPESVFEAAT 292
Query: 204 HAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSG 260
A Q VVYY PR S +F + + A+ ++ GMR+KM FE EDS F G
Sbjct: 293 LAANGQPFEVVYY-PRASTPEFCVKASLVKAALQIRWCPGMRFKMAFETEDSSRISWFMG 351
Query: 261 TVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAK 319
T+ V+ P W +S WR L+V WDEP + RVSPW +E + S P + L
Sbjct: 352 TISSVQVAEPLRWPESPWRLLQVTWDEPDLLQNVKRVSPWLVE--LVSNMPAI---HLTP 406
Query: 320 NKRPRLSMEVPPL-DLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFS 378
PR M +P D P P + DK H H S
Sbjct: 407 FSPPRKKMRLPQHPDFPFEGQLPMPTFSGNLLGPSSPFGCLPDKTPAGMQGARHAHYGLS 466
Query: 379 SNSNFMSRTQSDGEWLTSPRV-------KFSQQLFQEAIDDNKNISAWPAHSGHSTPHPS 431
+ +++ + P + KFS + ++N+S S HST
Sbjct: 467 LSDMHLNKLHTGLFPAGFPPLDHAAAPSKFSNNTMIQKPTMSENLSCLLTMS-HSTQTSK 525
Query: 432 KPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIIS-TIS 490
KP++ + + LFG ++ SL++ G +S ++
Sbjct: 526 KPDDVKPPQLI-------------LFGQPILTEQQ----------ISLSSSGDTVSPVLT 562
Query: 491 AAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSC--LTSNRSRT---------KVQMQ 539
+ SDG +D + +Q S +E S + NR T KV M+
Sbjct: 563 GNSSSDGNADKMANHSDNSGSALQQSIQERSSCEGFQWYKDNRHETEPHLETGHCKVFME 622
Query: 540 GVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPW-- 597
VGR LDL+ L YD L +L +MF I ++ T ++Y D G + VGD+P+
Sbjct: 623 SEDVGRTLDLSLLGSYDELYRKLADMFGID---NSETLNHVLYRDGTGAVKHVGDEPFSC 679
Query: 598 HEFCNMVKRIFI 609
+F +R+ I
Sbjct: 680 SDFMKTARRLTI 691
>gi|356570939|ref|XP_003553640.1| PREDICTED: auxin response factor 2-like [Glycine max]
Length = 630
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 140/334 (41%), Positives = 189/334 (56%), Gaps = 58/334 (17%)
Query: 1 MEQLEASTN--QELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQN-- 56
+EQ+ A T Q+ + IP++ LPSKILC++++I L AE +DEVYAQ+TL+P Q+
Sbjct: 51 LEQVAAYTQHQQDGHMEIPVYDLPSKILCKIMHIELKAEAFSDEVYAQVTLVPALKQDNL 110
Query: 57 --EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQ 114
E D P+ + ++FSK+LT SDTSTHGGFSV +KHA EC PPLDM Q TP Q
Sbjct: 111 RLEVEENDQIPSIT---TTYTFSKILTPSDTSTHGGFSVPKKHADECFPPLDMTQQTPAQ 167
Query: 115 ELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGV 174
E+VAKDL+G E+GE+ VG+
Sbjct: 168 EIVAKDLNG-----------------------------------------AESGEIRVGI 186
Query: 175 RCLARQQS--SMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKY 230
R S S SS+IS SM LG+LA+ASHAV++ TMF+VYY P T+ +FI+ L Y
Sbjct: 187 RRATEHLSNVSQSSSLISGHSMQLGILASASHAVSSGTMFIVYYHPWTNPFEFIVPLRTY 246
Query: 231 LEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPA- 288
L++ + +GMR +M+ E E+S RR +GT++G ED W S+WR LKVQWD
Sbjct: 247 LKSTVPDYPIGMRVQMQHEVEES-LRRHAGTIIGHEDIDKIRWPGSEWRCLKVQWDAVLD 305
Query: 289 SITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 322
P+RV PW IEP ++ V P L K+
Sbjct: 306 DKMNPERVCPWWIEPLESAKEKKQV-PALPTTKK 338
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 67/111 (60%), Gaps = 2/111 (1%)
Query: 513 VQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL 572
++V+P ++ K+ +NRS TKV G A+GRA+DL GY LI EL+ MF+ +G L
Sbjct: 514 MRVAPGKT-CKKCHRVNNRSCTKVLKLGTALGRAVDLARFHGYTELIAELDSMFEFRGSL 572
Query: 573 -HTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 622
+ + W + DD+GDMM +GD PW +F +V+++ IC + + P S
Sbjct: 573 INESSGWHVTCMDDDGDMMQLGDYPWQDFQGVVQKMIICPKEGTNNIKPSS 623
>gi|18417527|ref|NP_567841.1| auxin response factor 16 [Arabidopsis thaliana]
gi|46576629|sp|Q93YR9.1|ARFP_ARATH RecName: Full=Auxin response factor 16
gi|16604695|gb|AAL24140.1| putative transcription factor [Arabidopsis thaliana]
gi|20259589|gb|AAM14137.1| putative transcription factor [Arabidopsis thaliana]
gi|332660318|gb|AEE85718.1| auxin response factor 16 [Arabidopsis thaliana]
Length = 670
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 198/650 (30%), Positives = 286/650 (44%), Gaps = 103/650 (15%)
Query: 21 LPSKILCRVVNIHLMAEQETDEVYAQITLLP---------EPSQNEPTTPDPCPADSPRP 71
+P +LCRV+ I MA+ E+DEV+A++ L+P E E D +S
Sbjct: 60 IPPMVLCRVLAIKYMADAESDEVFAKLRLIPLKDDEYVDHEYGDGE----DSNGFESNSE 115
Query: 72 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 131
K SF+K LT SD + GGFSV R A P LD N P Q ++AKD+HG W+F+HI
Sbjct: 116 KTPSFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFRHI 175
Query: 132 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR------------ 179
+RG PRRHLLTTGWS FV K+LVAGD+ VF+R ENG+L VG+R R
Sbjct: 176 YRGTPRRHLLTTGWSNFVNQKKLVAGDSIVFMRAENGDLCVGIRRAKRGGIGNGPEYSAG 235
Query: 180 ----QQSSMPSSVI---SSQSMHL---------------GVLATASHAVATQTMFVVYY- 216
S SS++ S S+ V+ A+ A++ + VVYY
Sbjct: 236 WNPIGGSCGYSSLLREDESNSLRRSNCSLADRKGKVTAESVIEAATLAISGRPFEVVYYP 295
Query: 217 KPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKD 274
+ TS+F + A+ + GMR+KM FE EDS F GTV V P W +
Sbjct: 296 RASTSEFCVKALDARAAMRIPWCSGMRFKMAFETEDSSRISWFMGTVSAVNVSDPIRWPN 355
Query: 275 SKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPRLSMEVP--- 330
S WR L+V WDEP + RV+PW +E V++ V P+ L PR M +P
Sbjct: 356 SPWRLLQVAWDEPDLLQNVKRVNPWLVE-LVSN-----VHPIPLTSFSPPRKKMRLPQHP 409
Query: 331 -------PLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNF 383
+ +PS S P S L + V + R + H + SD + +
Sbjct: 410 DYNNLINSIPVPSFPSNPLIRSSPLSSVLDNVPVGLQGARHNAHQYYGLSSSDL--HHYY 467
Query: 384 MSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVE 443
++R P D KN + + +TP NDT ++
Sbjct: 468 LNRPPP----PPPPSSLQLSPSLGLRNIDTKNEKGFCFLTMGTTPC-----NDTKSKK-- 516
Query: 444 TGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAK 503
+ LFG ++ P E++ T +I T ++ S+ +
Sbjct: 517 --------SHIVLFGKLIL-------PEEQLSEKGSTDTANIEKTQISSGGSNQNGVAGR 561
Query: 504 EFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELE 563
EF + SP S+ KV M+ VGR LDL+ L Y+ L +L
Sbjct: 562 EFSSSDEG----SPC-SKKVHDASGLETGHCKVFMESDDVGRTLDLSVLGSYEELSRKLS 616
Query: 564 EMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQ 613
+MF IK + ++Y D G + G++P+ EF +R+ I + Q
Sbjct: 617 DMFGIK---KSEMLSSVLYRDASGAIKYAGNEPFSEFLKTARRLTILTEQ 663
>gi|356537563|ref|XP_003537296.1| PREDICTED: auxin response factor 18-like [Glycine max]
Length = 700
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 195/656 (29%), Positives = 291/656 (44%), Gaps = 94/656 (14%)
Query: 20 RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKV 79
++P + CRV + A+ ETDEVYA++ L+P + + D + K SF+K
Sbjct: 62 KVPPFVPCRVTAVKYRADPETDEVYAKLKLIPLNANDVDYDRDVVGGAETQDKPASFAKT 121
Query: 80 LTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRH 139
LT SD + GGFSV R A P LD + P Q ++AKD+HG W+F+HI+RG PRRH
Sbjct: 122 LTQSDANNGGGFSVPRYCAETIFPRLDYSVDPPVQNILAKDVHGETWKFRHIYRGTPRRH 181
Query: 140 LLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR------CLARQQSSM--------- 184
LLTTGWSTFV K+LVAGD+ VFLR ENG+L VG+R C + SS
Sbjct: 182 LLTTGWSTFVNHKKLVAGDSIVFLRAENGDLCVGIRRAKKGICGGLETSSGWNPAGGNCH 241
Query: 185 ---------------------------PS-SVISSQSMHLGVLATASHAVATQTMFVVYY 216
PS S++ + ++ AS+ A + F V Y
Sbjct: 242 IPYGGFSPFFREDDNRISRNGNSNGLNPSVSMMGKGKVRPEAVSEASNLAANKKPFEVVY 301
Query: 217 KPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HW 272
PR S +F + + A+ ++ G+R+KM FE EDS F GT+ + P +W
Sbjct: 302 YPRASTPEFCVKASLVEAALQIRWCSGIRFKMAFETEDSSRISWFMGTISSAQVADPLNW 361
Query: 273 KDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRLSMEVPP 331
+S WR L+V WDEP + RVSPW +E + S P + P K+ RL +
Sbjct: 362 PNSPWRLLQVTWDEPDLLQNVRRVSPWLVE--LVSNMPAIHFSPFSPPRKKLRLPQQP-- 417
Query: 332 LDLPSAASAPWS---ARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQ 388
D P P S + L N Q E A H H S + +S+ Q
Sbjct: 418 -DFPLDGQIPLSTFPSNLLGPSNTNQFGCLLESTPAGMQGA-RHAHYGLSLSDLHLSKLQ 475
Query: 389 SDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNND-------TLLEQ 441
S LF + + +A P +S KPN T+
Sbjct: 476 SG--------------LFSTGF-PSLDHAATPMRVSNSITL-QKPNLSENVSCLLTMANS 519
Query: 442 VETGRKTETGT--SCRLFGIELINHATSSAPSEKVPVSSLTT-----EGHIISTISAAAD 494
++ +K + G S LFG +++ S S +S + T +G+ + ++ +D
Sbjct: 520 TQSSKKLDVGKTPSLVLFGQKILTEQQISPSSSGDTLSPVLTRNCSSDGN-VDKVTNFSD 578
Query: 495 SDGKSDIAKEFKEKKQ-EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLV 553
G + + +E E+ Q Q ++ L KV M+ VGR +DL+ L
Sbjct: 579 GSGSALHQEGLREHSSCERFQWCKDNHQETEAGL--EIGHCKVFMESEDVGRTMDLSLLR 636
Query: 554 GYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 609
YD L +L +MF I+ + ++Y D G + + D+ + +F KR+ I
Sbjct: 637 SYDELHRKLADMFGIE---KSEMLSHVLYRDSTGAVKRISDESFSDFTRTAKRLTI 689
>gi|225449038|ref|XP_002273590.1| PREDICTED: auxin response factor 18 [Vitis vinifera]
Length = 683
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 194/665 (29%), Positives = 277/665 (41%), Gaps = 122/665 (18%)
Query: 20 RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPA----DSPRPKVHS 75
R+P +LCRV + +A+ E+DEVYA+I L+P + T D ++P K S
Sbjct: 58 RIPPLVLCRVSAVKYLADPESDEVYAKIRLIPLRNTEGETEDDVLMGGNGIEAPE-KPAS 116
Query: 76 FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQ 135
F+K LT SD + GGFSV R A P LD + P Q ++AKD+HG WRF+HI+RG
Sbjct: 117 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWRFRHIYRGT 176
Query: 136 PRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR------CLARQQSSMPSSVI 189
PRRHLLTTGWS FV K LVAGD+ VFLR ENG+L VG+R C S +
Sbjct: 177 PRRHLLTTGWSNFVNKKNLVAGDSIVFLRAENGDLCVGIRRAKRAGCGPESPSGWNPASG 236
Query: 190 SSQSMHLGV------------------------------LATASHAVATQTMFVVYYKPR 219
+ S + G +A A+ A FV+ Y PR
Sbjct: 237 NGTSPYRGYSGFLREDENRPILTHSNAGFRGKGRVRAESVAEAATLAANGQPFVIVYYPR 296
Query: 220 TS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDS 275
S +F + + A+ ++ GM++KM FE +DS F G + V P W +S
Sbjct: 297 ASTPEFCVKASSVRAAMQIQWCPGMKFKMAFETDDSSRISWFMGNISSVHVNDPIRWPNS 356
Query: 276 KWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRLSM------- 327
WR L+V WDEP + RV+PW +E + S P++ + P K+ RL
Sbjct: 357 PWRLLQVTWDEPDLLQNVKRVNPWLVE--LVSHVPSIHLSPFSPPRKKLRLQQQSEFPLV 414
Query: 328 -EVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSR 386
++P S A P S S N+ A H + SD N
Sbjct: 415 GQIPMPSFSSNALRPSSPLCCISDNIPAGIQGAR------HAQFGLSSSDLHFN------ 462
Query: 387 TQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGR 446
K LF + + +A P+ + NN+ + + G
Sbjct: 463 -------------KLQLGLFPLGLQQQLDQTAPPSSILSGNTMSNHENNENISCLLTIGN 509
Query: 447 KTETGTSCR--------LFG--IELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSD 496
T+ LFG I + + S + +SS SD
Sbjct: 510 STQNSKKNNEIKAPYFFLFGQPILIEQQVSQSCSGDTAGISS----------------SD 553
Query: 497 GKSDIAKEFKEKKQEQV-QVSPKESQSKQSCLTSNR-----------SRTKVQMQGVAVG 544
G + F + Q P+ES S + LT + KV M+ VG
Sbjct: 554 GNPEKTPNFSDGSGSAFHQNGPQESSSDEGLLTWYKDHQKTNLGLETGHCKVFMESEDVG 613
Query: 545 RALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMV 604
R LDL+ L Y+ L +L MF I+ ++Y D+ G + +GD P+ EF
Sbjct: 614 RTLDLSILGSYEELYRKLANMFGIE---RAEMLSNVLYRDEAGIVKHIGDAPFGEFLKTA 670
Query: 605 KRIFI 609
+R+ I
Sbjct: 671 RRLTI 675
>gi|51451357|gb|AAU03112.1| putative ETTIN-like auxin response factor [Oryza sativa Japonica
Group]
Length = 599
Score = 221 bits (564), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 113/287 (39%), Positives = 177/287 (61%), Gaps = 18/287 (6%)
Query: 64 CPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPL------------DMNQST 111
C A+ H F K LTASDTSTHGGFSV R+ A +C PPL D
Sbjct: 21 CDAEKKPRMPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLVIHLKEKLVTFNDYKTVR 80
Query: 112 PTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELH 171
P+QEL+A DLHG +W+F+HI+RGQPRRHLLT GWS+FV K+LV+GD +FLRG++G+L
Sbjct: 81 PSQELIAVDLHGTQWKFRHIYRGQPRRHLLTIGWSSFVNRKKLVSGDAVLFLRGDDGQLR 140
Query: 172 VGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNK 229
+GVR + ++ ++S L +L++ + ++ +++F + + PR+ S+FI+ +
Sbjct: 141 LGVRRAVQLRNEALFEPVNSSDSKLRILSSVASSLENKSVFHICFNPRSGASEFIVPYWR 200
Query: 230 YLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPA 288
L+++N+ F++GMR+++ +E ED+ ER +G + G+ + P W S+W+ L V+WD+
Sbjct: 201 LLKSLNHPFSIGMRFRVCYESEDANERS-AGLISGISEVDPIRWPGSRWKCLLVRWDDST 259
Query: 289 SITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLP 335
+ +RVSPWEIE S + + + + +KR +L LD P
Sbjct: 260 DSSHQNRVSPWEIERVGGSVS--VTHSLSSGSKRTKLHFPQGSLDTP 304
>gi|379323226|gb|AFD01312.1| auxin response factor 16-2 [Brassica rapa subsp. pekinensis]
Length = 694
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 190/644 (29%), Positives = 272/644 (42%), Gaps = 107/644 (16%)
Query: 21 LPSKILCRVVNIHLMAEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSK 78
+P +LCRV+ I MA+ E+DEV+A++ L+P + + + ++ K SF+K
Sbjct: 100 IPPMVLCRVLAIKYMADPESDEVFAKLRLIPLKDDDHDYGDGQEGNGFETNSEKTPSFAK 159
Query: 79 VLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRR 138
LT SD + GGFSV R A P LD N P Q ++AKD+HG W+F+HI+RG PRR
Sbjct: 160 TLTQSDANNGGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFRHIYRGTPRR 219
Query: 139 HLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR------------------- 179
HLLTTGWS FV K+LVAGD+ VF+R E+G+L VG+R R
Sbjct: 220 HLLTTGWSNFVNQKKLVAGDSIVFMRAESGDLCVGIRRAKRGGIGNGPEYSPGWNPIGGS 279
Query: 180 ----------QQSSMPSSVIS-----SQSMHLGVLATASHAVATQTMFVVYY-KPRTSQF 223
+ +S+ S S + V+ A+ A+ + VVYY + TS+F
Sbjct: 280 CGYSSLLREDESNSLRRSNCSLADRKGKVAAESVIEAATLAINGRGFEVVYYPRASTSEF 339
Query: 224 IISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLK 281
+ A+ + GMR+KM FE EDS F GTV V P W +S WR L+
Sbjct: 340 CVKALDARAAMRIPWCSGMRFKMAFETEDSSRISWFMGTVSAVSVSDPIRWPNSPWRLLQ 399
Query: 282 VQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPRLSMEVP---------- 330
V WDEP + RV+PW +E V++ V P+ L PR M +P
Sbjct: 400 VAWDEPDLLQNVKRVNPWLVE-LVSN-----VHPIPLTSFSPPRKKMRLPQHPDYNNLIN 453
Query: 331 PLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSD 390
+ +PS S P S L + V + R + H + SD + +++R
Sbjct: 454 SIPVPSFPSNPLIRSNPLSSVLDNVPVGLQGARHNAHQYYGLSSSDL--HHYYLNRPPPP 511
Query: 391 GEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTET 450
+ P SQ L ID + E
Sbjct: 512 PQPSALP---LSQPLGLRNIDS----------------------------------RNEK 534
Query: 451 GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 510
G G N T S S V L IS G +D A K
Sbjct: 535 GFCFLTMGTTPCNDDTESKKSHIVLFGKLILPEEQIS-------EKGSTDTANTSGGSKL 587
Query: 511 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI-K 569
+ S KV M+ VGR LDL+ L Y+ L +L +MF I K
Sbjct: 588 SSSEEGSPCSNKAHDAAGLETGHCKVFMESDDVGRTLDLSVLGSYEELSRKLSDMFGIQK 647
Query: 570 GQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQ 613
++ + ++Y D G + G++P+ EF +R+ I + Q
Sbjct: 648 AEMLS----SVLYRDASGAIKYAGNEPFSEFLKTARRLTIVTEQ 687
>gi|168056839|ref|XP_001780425.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668101|gb|EDQ54715.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 420
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 137/346 (39%), Positives = 179/346 (51%), Gaps = 55/346 (15%)
Query: 27 CRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTS 86
CRVV+++ +A+ ETDEV+A+I L PE + D A P K SF+K LT SD +
Sbjct: 78 CRVVSVNFLADTETDEVFARICLQPEIGSSAQDLTDDSLASPPLEKPASFAKTLTQSDAN 137
Query: 87 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 146
GGFS+ R A PPLD P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWS
Sbjct: 138 NGGGFSIPRYCAETIFPPLDYCIDPPVQTVLAKDVHGEVWKFRHIYRGTPRRHLLTTGWS 197
Query: 147 TFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLG--------- 197
TFV K+LVAGD VFLR +GEL VGVR R S+ SS S +G
Sbjct: 198 TFVNQKKLVAGDAIVFLRIASGELCVGVRRSMRGVSNGESSSWHSSISGVGDNGYALNSS 257
Query: 198 -------------------------VLATASHAVATQTMFVVYY-KPRTSQFIISLNKYL 231
VL A+ AV+ + VVYY + T++F +
Sbjct: 258 IRSENQGSPTTSSFARDRARVTAKSVLEAAALAVSGERFEVVYYPRASTAEFCVKAGLVK 317
Query: 232 EAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPAS 289
A+ + GMR+KM FE EDS F GT+ V+ P W S WR L+V WDEP
Sbjct: 318 RALEQSWYAGMRFKMAFETEDSSRISWFMGTIAAVQAADPVLWPSSPWRVLQVTWDEPDL 377
Query: 290 ITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLP 335
+ +RVSPW++E VA+ L M++PP+ LP
Sbjct: 378 LQGVNRVSPWQLE-LVAT-----------------LPMQLPPVSLP 405
>gi|297741605|emb|CBI32737.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 126/289 (43%), Positives = 164/289 (56%), Gaps = 7/289 (2%)
Query: 20 RLPSKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSK 78
R+P+ I CRV + MA+ E+DEVYA+ITL+P S+++ + K SF+K
Sbjct: 62 RIPAYIPCRVSAMKFMADPESDEVYAKITLVPLNGSESDYDDDGYGNGTESQEKPASFAK 121
Query: 79 VLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRR 138
LT SD + GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG PRR
Sbjct: 122 TLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQNILAKDVHGETWKFRHIYRGTPRR 181
Query: 139 HLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHL-G 197
HLLTTGWSTFV K+L+AGD+ VFLR ENG+L VG+R R S +
Sbjct: 182 HLLTTGWSTFVNHKKLIAGDSIVFLRAENGDLCVGIRRAKRGIGCSNGSFFGRVKVTAEA 241
Query: 198 VLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPE 255
V+ AV Q V+YY PR S +F + + A ++ GMR+KM FE EDS
Sbjct: 242 VIEAVRLAVNGQPFEVIYY-PRASTPEFCVKSSLVKSASQIRWCSGMRFKMAFETEDSSR 300
Query: 256 RR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 302
F GT+ V+ P W DS WR L+V WDEP + RVSPW +E
Sbjct: 301 ISWFMGTISSVQVADPVRWPDSPWRLLQVTWDEPDLLQNVKRVSPWLVE 349
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 535 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 594
KV M+ VGR LDL+ L YD L +L +MF I+ + + ++Y D G + +GD
Sbjct: 495 KVFMESEDVGRTLDLSLLTSYDELCGKLAKMFTIE---DSEMRNHVLYRDATGAVKHIGD 551
Query: 595 DPWHEFCNMVKRIFI 609
+P+ +F KR+ I
Sbjct: 552 EPFSDFTKTAKRLTI 566
>gi|259490000|ref|NP_001159132.1| uncharacterized protein LOC100304210 [Zea mays]
gi|223942161|gb|ACN25164.1| unknown [Zea mays]
gi|295844278|gb|ADG43136.1| auxin response factor 2 [Zea mays]
gi|407232686|gb|AFT82685.1| ARF2 ARF type transcription factor, partial [Zea mays subsp. mays]
gi|414871040|tpg|DAA49597.1| TPA: auxin response factor 2 [Zea mays]
Length = 681
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 137/344 (39%), Positives = 182/344 (52%), Gaps = 42/344 (12%)
Query: 21 LPSKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQNEPTTPDPC---PADSPRPKVHSF 76
LPS +LC V + +A+ ETDEV+A+I L+P P + E PD PAD+ R K+ SF
Sbjct: 57 LPSLVLCSVTGVRFLADPETDEVFAKIRLVPVAPGEVEFREPDEFSVDPADA-REKLSSF 115
Query: 77 SKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQP 136
+K LT SD + GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG P
Sbjct: 116 AKTLTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIYRGTP 175
Query: 137 RRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHL 196
RRHLLTTGWSTFV K+LVAGD+ VFLR E+GEL VG+R + R + +
Sbjct: 176 RRHLLTTGWSTFVNQKKLVAGDSIVFLRTEHGELCVGIRRVKRVSCGGMECMSGWNAPGY 235
Query: 197 GVLA-------------------------------TASHAVATQTMFVVYYKPRTS--QF 223
G L+ AS A + Q VVYY PR S +F
Sbjct: 236 GALSAFLKDEEGKMMKSHGGYMRGRGKVKITDVVNAASLAASGQPFEVVYY-PRASTPEF 294
Query: 224 IISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLK 281
++ A+ N++ GMR+KM FE EDS F GT+ + P W +S WR L+
Sbjct: 295 VVKAASVQNAMRNQWCPGMRFKMAFETEDSSRISWFMGTIASAQVADPIRWPNSPWRLLQ 354
Query: 282 VQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRL 325
V WDEP + V+PW +E V+S P + P K+ R+
Sbjct: 355 VAWDEPDLLQNVKCVNPWLVE-IVSSIPPIHLGPFSPPRKKLRV 397
Score = 45.4 bits (106), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 534 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVG 593
KV ++ VGR +DL+ Y+ L +L +MF I+ + Y D G + G
Sbjct: 592 CKVFVESEDVGRTIDLSVFGSYEELYGQLADMFGIE---KAEVMSHLCYRDAAGAVKRTG 648
Query: 594 DDPWHEFCNMVKRIFICSSQDVKKMSP 620
D+P+ +F + +R+ I S + + P
Sbjct: 649 DEPFCDFMKVARRLTIVESTEGRLQKP 675
>gi|242093966|ref|XP_002437473.1| hypothetical protein SORBIDRAFT_10g027790 [Sorghum bicolor]
gi|241915696|gb|EER88840.1| hypothetical protein SORBIDRAFT_10g027790 [Sorghum bicolor]
Length = 709
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 201/683 (29%), Positives = 288/683 (42%), Gaps = 119/683 (17%)
Query: 16 IPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEP---------TTPDPCPA 66
+P R+P+ +LCRV + MA+ +TDEV+A+I L P NEP
Sbjct: 60 LPAGRVPALVLCRVAAVRFMADPDTDEVFAKIRLAPV-RPNEPGYAADADDAIGAAAAGG 118
Query: 67 DSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEW 126
+ K SF+K LT SD + GGFSV R A P LD + P Q ++AKD+HG W
Sbjct: 119 GAQEDKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVW 178
Query: 127 RFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMP- 185
+F+HI+RG PRRHLLTTGWSTFV K+LVAGD+ VF+R ENG+L VG+R + P
Sbjct: 179 KFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFMRTENGDLCVGIRRAKKGGIGGPE 238
Query: 186 ------------------------------SSVISSQSMHLG-----------VLATASH 204
S ++++ + G V+ A+
Sbjct: 239 FLHHHQPPPPPGGGGYAGFSMFLRGGEEDGSKMMATGAATRGNKVRVRVRPEEVVEAANL 298
Query: 205 AVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGT 261
AV+ Q VVYY PR S +F + A+ ++ GMR+KM FE EDS F GT
Sbjct: 299 AVSGQPFEVVYY-PRASTPEFCVKAGAVRAAMRTQWCAGMRFKMAFETEDSSRISWFMGT 357
Query: 262 VVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE-----PFVASATPNLVQP 315
V V+ P W +S WR L+V WDEP + RVSPW +E P + TP P
Sbjct: 358 VSAVQVADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMPAIHHLTPFSPPP 417
Query: 316 --VLAKNKRPRLSMEVPPLDLPSAASAPWSARLA-------------QSHNLTQLSVTAE 360
L P L +E P +P + Q Q ++
Sbjct: 418 RKKLCVPLYPELPLEGHQFPAPMFHGSPLGRGVGPMCYFPDGTPAGIQGARHAQFGISLS 477
Query: 361 DKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWP 420
D +D + H + Q DG + PR+ + A + +IS
Sbjct: 478 DLHLDKLQSSLSPHG--------LHHHQLDGHGV-QPRIAAGLIIGHPAAARD-DISCLL 527
Query: 421 AHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFG--------IELINHATSSAPSE 472
+TP KP++D + LFG I L N A AP +
Sbjct: 528 TIG--TTPQNRKPSSD-------VKKAAAAAPQLMLFGKPILTEQQISLGNVAGFPAP-K 577
Query: 473 KVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRS 532
K P + T+S +SD S + + S ++++ L +
Sbjct: 578 KSPSDDVAER-----TVS---NSDVSSPGSNHGGSSRSSGGAPSCQDNKVPDLGLETGHC 629
Query: 533 RTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDD-EGDMML 591
+ +Q + V GR LDL+ + Y+ L L +MF I T + Y DD G +
Sbjct: 630 KVFMQSEDV--GRTLDLSAVGSYEELYQRLADMFGID---KTELMSHVFYRDDASGALKH 684
Query: 592 VGDDPWHEFCNMVKRIFICSSQD 614
GD P+ EF +R+ I + +
Sbjct: 685 TGDKPFSEFTKTARRLTILTDAE 707
>gi|409924914|gb|AFV47363.1| auxin response factor 10 [Brassica rapa subsp. rapa]
Length = 705
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 141/372 (37%), Positives = 186/372 (50%), Gaps = 64/372 (17%)
Query: 20 RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVH----- 74
R+P ILCRV ++ +A+ ETDEVY++ITLLP P + D +P P V+
Sbjct: 50 RVPPLILCRVASVKFLADSETDEVYSKITLLPLPGNDLDLENDAVLGLTPSPDVNGNEKP 109
Query: 75 -SFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 133
SF+K LT SD + GGFSV R A P LD P Q ++AKD+HG W+F+HI+R
Sbjct: 110 ASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYR 169
Query: 134 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR------------QQ 181
G PRRHLLTTGWSTFV K+L+AGD+ VFLR E G+L VG+R R
Sbjct: 170 GTPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSETGDLCVGIRRAKRGGLGSNGDNNSNSN 229
Query: 182 SSMPS--------SVISSQSMHLGVLATASHAVAT------------------------Q 209
+ P + +S+ M + AT A Q
Sbjct: 230 NPYPGFSGFLRDDEITTSKLMMMKRNATGGGGNANDANAPGGRVRVEAVAEAVARAACGQ 289
Query: 210 TMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVE 266
VVYY PR S +F + + A+ ++ GMR+KM FE EDS F GTV V+
Sbjct: 290 AFEVVYY-PRASTPEFCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQ 348
Query: 267 DFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPR 324
P W +S WR L+V WDEP + RVSPW +E + S P + + P PR
Sbjct: 349 VADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVE--LVSNMPAIHLSPF-----SPR 401
Query: 325 LSMEVP-PLDLP 335
+ +P P D P
Sbjct: 402 KKLRIPQPFDFP 413
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 535 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 594
KV M+ VGR LDL+ + Y L +L EMF I+ + T +VY D G +GD
Sbjct: 596 KVFMESEDVGRTLDLSVIGSYQELYRKLAEMFGIEERSDLLT--HVVYRDANGVTKRIGD 653
Query: 595 DPWHEFCNMVKRIFI---CSSQDVKK 617
+P+ +F KR+ I S +V+K
Sbjct: 654 EPFSDFMRATKRLTIKMDISGDNVRK 679
>gi|379323220|gb|AFD01309.1| auxin response factor 10 [Brassica rapa subsp. pekinensis]
Length = 705
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 141/372 (37%), Positives = 186/372 (50%), Gaps = 64/372 (17%)
Query: 20 RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVH----- 74
R+P ILCRV ++ +A+ ETDEVY++ITLLP P + D +P P V+
Sbjct: 50 RVPPLILCRVASVKFLADSETDEVYSKITLLPLPGNDLDLENDAVLGLTPSPDVNGNEKP 109
Query: 75 -SFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 133
SF+K LT SD + GGFSV R A P LD P Q ++AKD+HG W+F+HI+R
Sbjct: 110 ASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYR 169
Query: 134 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR------------QQ 181
G PRRHLLTTGWSTFV K+L+AGD+ VFLR E G+L VG+R R
Sbjct: 170 GTPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSETGDLCVGIRRAKRGGLGSNGDNNSNSN 229
Query: 182 SSMPS--------SVISSQSMHLGVLATASHAVAT------------------------Q 209
+ P + +S+ M + AT A Q
Sbjct: 230 NPYPGFSGFLRDDEITTSKLMMMKRNATGGGGNANDANAPGGRVRVEAVAEAVARAACGQ 289
Query: 210 TMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVE 266
VVYY PR S +F + + A+ ++ GMR+KM FE EDS F GTV V+
Sbjct: 290 AFEVVYY-PRASTPEFCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQ 348
Query: 267 DFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPR 324
P W +S WR L+V WDEP + RVSPW +E + S P + + P PR
Sbjct: 349 VADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVE--LVSNMPAIHLSPF-----SPR 401
Query: 325 LSMEVP-PLDLP 335
+ +P P D P
Sbjct: 402 KKLRIPQPFDFP 413
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 535 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 594
KV M+ VGR LDL+ + Y L +L EMF I+ + T +VY D G +GD
Sbjct: 596 KVFMESEDVGRTLDLSVIGSYQELYRKLAEMFGIEERSDLLT--HVVYRDANGVTKRIGD 653
Query: 595 DPWHEFCNMVKRIFI---CSSQDVKK 617
+P+ +F KR+ I S +V+K
Sbjct: 654 EPFSDFMRATKRLTIKMDISGDNVRK 679
>gi|308081526|ref|NP_001183887.1| uncharacterized protein LOC100502480 [Zea mays]
gi|238015272|gb|ACR38671.1| unknown [Zea mays]
Length = 534
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 110/211 (52%), Positives = 150/211 (71%), Gaps = 6/211 (2%)
Query: 117 VAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRC 176
+AKDLHG EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ +N +L +G+R
Sbjct: 1 MAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRR 60
Query: 177 LARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV 234
R Q+ MPSSV+SS SMH+G+LA A+HA +T + F ++Y PR S+F+I L KY++AV
Sbjct: 61 ANRPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFTIFYNPRASPSEFVIPLVKYVKAV 120
Query: 235 -NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITR 292
+ + +VGMR++M FE E+S RR+ GT+ G+ D S W +S WRS+KV WDE + R
Sbjct: 121 YHTRISVGMRFRMLFETEESSVRRYMGTITGICDLDSVRWPNSHWRSVKVGWDESTAGER 180
Query: 293 PDRVSPWEIEPFVASATPNLVQPVLAKNKRP 323
RVS WEIEP + P P + KRP
Sbjct: 181 QPRVSLWEIEPL--TTFPMYPSPFPLRLKRP 209
>gi|413934438|gb|AFW68989.1| hypothetical protein ZEAMMB73_088581 [Zea mays]
Length = 739
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 110/211 (52%), Positives = 150/211 (71%), Gaps = 6/211 (2%)
Query: 117 VAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRC 176
+AKDLHG EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ +N +L +G+R
Sbjct: 1 MAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRR 60
Query: 177 LARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV 234
R Q+ MPSSV+SS SMH+G+LA A+HA +T + F ++Y PR S+F+I L KY++AV
Sbjct: 61 ANRPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFTIFYNPRASPSEFVIPLVKYVKAV 120
Query: 235 -NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITR 292
+ + +VGMR++M FE E+S RR+ GT+ G+ D S W +S WRS+KV WDE + R
Sbjct: 121 YHTRISVGMRFRMLFETEESSVRRYMGTITGICDLDSVRWPNSHWRSVKVGWDESTAGER 180
Query: 293 PDRVSPWEIEPFVASATPNLVQPVLAKNKRP 323
RVS WEIEP + P P + KRP
Sbjct: 181 QPRVSLWEIEPL--TTFPMYPSPFPLRLKRP 209
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 544 GRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEFC 601
GR+LD+T Y L EL +F ++GQL R+ W++V+ D E D++LVGDDPW EF
Sbjct: 618 GRSLDITRFSSYHELRRELGRLFGLEGQLEDPLRSGWQLVFVDREEDVLLVGDDPWQEFV 677
Query: 602 NMVKRIFICSSQDVKKM 618
+ V I I S Q+V++M
Sbjct: 678 STVSCIKILSPQEVQQM 694
>gi|449451004|ref|XP_004143252.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
Length = 698
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 197/658 (29%), Positives = 281/658 (42%), Gaps = 100/658 (15%)
Query: 20 RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCP--ADSPRPKVHSFS 77
++PS LCRV I +A+ +TDEV+A++ L+P D S + K SF+
Sbjct: 62 KVPSYTLCRVSAIKFLADPDTDEVFAKLRLIPINGSELDFEDDGIGRLNGSEQDKPTSFA 121
Query: 78 KVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPR 137
K LT SD + GGFSV R A P LD + P Q ++AKD+HG W+F+HI+RG PR
Sbjct: 122 KTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRHIYRGTPR 181
Query: 138 RHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVI-------- 189
RHLLTTGWSTFV K+LVAGD+ VFLR ENG+L VG+R R P S
Sbjct: 182 RHLLTTGWSTFVNHKKLVAGDSIVFLRAENGDLCVGIRRAKRGIGDGPESSCGWNPAGGN 241
Query: 190 ---------------------SSQSMH-----LG--------VLATASHAVATQTMFVVY 215
S+ M+ +G V A A Q +++
Sbjct: 242 CAVSYGAFSAFLREDDNRLTRSANGMNGNGSLMGKGKVKPESVTEAAKLASNGQPFEIIF 301
Query: 216 YKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-H 271
Y PR S +F + A+ ++ GMR+KM FE EDS F GT+ V+ P
Sbjct: 302 Y-PRASTPEFCVKAALVKAALQIRWCSGMRFKMAFETEDSSRISWFMGTINSVQVSDPLR 360
Query: 272 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPP 331
W +S WR L+V WDEP + RVSPW +E V+S +P + P K+ R
Sbjct: 361 WPESPWRLLQVTWDEPDLLQNVKRVSPWLVE-LVSSMSPIHLAPFSPPRKKFRYPQHP-- 417
Query: 332 LDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDG 391
D P P + + H D H H S + +S+ QS G
Sbjct: 418 -DFPLDNQPPVPSFSSYLHGTGSPFGCPPDNNPAGMQGARHAHFGLSLSDFHVSKLQS-G 475
Query: 392 EWLTSPR--------VKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVE 443
+ R + S + E ++N+S + HST K + V+
Sbjct: 476 LFSIGYRSLDPAAGSTRLSGNVMTEKPSMSENVSCLLTMA-HSTQASKK------FDGVK 528
Query: 444 TGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAK 503
T + LFG ++ S VS + T + SDG D
Sbjct: 529 TPQLI-------LFGRPILTELQMSQSFSGDTVSPVGT---------GNSSSDGNGDKMT 572
Query: 504 EFKEKKQEQV--QVSPKESQS------KQSCL----TSNRSRTKVQMQGVAVGRALDLTT 551
+ + Q P+ S K +C + KV M+ VGR LDL++
Sbjct: 573 NLSDGSGSALHQQGLPEGSAGENFQWYKDNCQEIDPNLDIGHCKVFMESEDVGRTLDLSS 632
Query: 552 LVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 609
L Y+ L +L MF I ++ T ++Y D G + VGD+ + +F +R+ I
Sbjct: 633 LGSYEELYRKLGNMFGID---NSETLNHVLYRDVSGAVKHVGDEQFSDFIKTARRLTI 687
>gi|400269944|gb|AFP74909.1| auxin response factor 10 [Brassica napus]
Length = 704
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 140/372 (37%), Positives = 186/372 (50%), Gaps = 64/372 (17%)
Query: 20 RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVH----- 74
R+P ILCR+ ++ +A+ ETDEVY++ITLLP P + D +P P V+
Sbjct: 50 RVPPLILCRLASVKFLADAETDEVYSKITLLPLPGNDLDLENDAVLGLTPSPDVNGNEKP 109
Query: 75 -SFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 133
SF+K LT SD + GGFSV R A P LD P Q ++AKD+HG W+F+HI+R
Sbjct: 110 ASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGKTWKFRHIYR 169
Query: 134 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR------------QQ 181
G PRRHLLTTGWSTFV K+L+AGD+ VFLR E G+L VG+R R
Sbjct: 170 GTPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSETGDLCVGIRRAKRGGLGSNGDNNSNSN 229
Query: 182 SSMPS--------SVISSQSMHLGVLATASHAVAT------------------------Q 209
+ P + +S+ M + AT A Q
Sbjct: 230 NPYPGFSGFLRDDEITTSKLMMMKRNATGGGGNANDANAPGGRVRVEAVAEAVARAACGQ 289
Query: 210 TMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVE 266
VVYY PR S +F + + A+ ++ GMR+KM FE EDS F GTV V+
Sbjct: 290 AFEVVYY-PRASTPEFCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQ 348
Query: 267 DFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPR 324
P W +S WR L+V WDEP + RVSPW +E + S P + + P PR
Sbjct: 349 VADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVE--LVSNMPAIHLSPF-----SPR 401
Query: 325 LSMEVP-PLDLP 335
+ +P P D P
Sbjct: 402 KKLRIPQPFDFP 413
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 535 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 594
KV M+ VGR LDL+ + Y L +L EMF I+ + T +VY D G +GD
Sbjct: 595 KVFMESEDVGRTLDLSVIGSYQELYRKLAEMFGIEERSDLLT--HVVYRDANGVTKRIGD 652
Query: 595 DPWHEFCNMVKRIFI---CSSQDVKK 617
+P+ +F KR+ I S +V+K
Sbjct: 653 EPFSDFMRATKRLTIKMDISGDNVRK 678
>gi|400269967|gb|AFP74918.1| auxin response factor 10 [Brassica napus]
Length = 706
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 140/372 (37%), Positives = 186/372 (50%), Gaps = 64/372 (17%)
Query: 20 RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVH----- 74
R+P ILCR+ ++ +A+ ETDEVY++ITLLP P + D +P P V+
Sbjct: 50 RVPPLILCRLASVKFLADAETDEVYSKITLLPLPGNDLDLENDAVLGLTPSPDVNGNEKP 109
Query: 75 -SFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 133
SF+K LT SD + GGFSV R A P LD P Q ++AKD+HG W+F+HI+R
Sbjct: 110 ASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGKTWKFRHIYR 169
Query: 134 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR------------QQ 181
G PRRHLLTTGWSTFV K+L+AGD+ VFLR E G+L VG+R R
Sbjct: 170 GTPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSETGDLCVGIRRAKRGGLGSNGDNNSNSN 229
Query: 182 SSMPS--------SVISSQSMHLGVLATASHAVAT------------------------Q 209
+ P + +S+ M + AT A Q
Sbjct: 230 NPYPGFSGFLRDDEITTSKLMMMKRNATGGGGNANDANAPGGRVRVEAVAEAVARAACGQ 289
Query: 210 TMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVE 266
VVYY PR S +F + + A+ ++ GMR+KM FE EDS F GTV V+
Sbjct: 290 AFEVVYY-PRASTPEFCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQ 348
Query: 267 DFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPR 324
P W +S WR L+V WDEP + RVSPW +E + S P + + P PR
Sbjct: 349 VADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVE--LVSNMPAIHLSPF-----SPR 401
Query: 325 LSMEVP-PLDLP 335
+ +P P D P
Sbjct: 402 KKLRIPQPFDFP 413
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 535 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 594
KV M+ VGR LDL+ + Y L +L EMF I+ + T +VY D G +GD
Sbjct: 597 KVFMESEDVGRTLDLSVIGSYQELYRKLAEMFGIEERSDLLT--HVVYRDANGVTKRIGD 654
Query: 595 DPWHEFCNMVKRIFI---CSSQDVKK 617
+P+ +F KR+ I S +V+K
Sbjct: 655 EPFSDFMRATKRLTIKMDISGDNVRK 680
>gi|400269965|gb|AFP74917.1| auxin response factor 10 [Brassica napus]
Length = 705
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 140/372 (37%), Positives = 186/372 (50%), Gaps = 64/372 (17%)
Query: 20 RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVH----- 74
R+P ILCR+ ++ +A+ ETDEVY++ITLLP P + D +P P V+
Sbjct: 50 RVPPLILCRLASVKFLADAETDEVYSKITLLPLPGNDLDLENDAVLGLTPSPDVNGNEKP 109
Query: 75 -SFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 133
SF+K LT SD + GGFSV R A P LD P Q ++AKD+HG W+F+HI+R
Sbjct: 110 ASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGKTWKFRHIYR 169
Query: 134 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR------------QQ 181
G PRRHLLTTGWSTFV K+L+AGD+ VFLR E G+L VG+R R
Sbjct: 170 GTPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSETGDLCVGIRRAKRGGLGSNGDNNSNSN 229
Query: 182 SSMPS--------SVISSQSMHLGVLATASHAVAT------------------------Q 209
+ P + +S+ M + AT A Q
Sbjct: 230 NPYPGFSGFLRDDEITTSKLMMMKRNATGGGGNANDANAPGGRVRVEAVAEAVARAACGQ 289
Query: 210 TMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVE 266
VVYY PR S +F + + A+ ++ GMR+KM FE EDS F GTV V+
Sbjct: 290 AFEVVYY-PRASTPEFCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQ 348
Query: 267 DFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPR 324
P W +S WR L+V WDEP + RVSPW +E + S P + + P PR
Sbjct: 349 VADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVE--LVSNMPAIHLSPF-----SPR 401
Query: 325 LSMEVP-PLDLP 335
+ +P P D P
Sbjct: 402 KKLRIPQPFDFP 413
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 535 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 594
KV M+ VGR LDL+ + Y L +L EMF I+ + T +VY D G +GD
Sbjct: 596 KVFMESEDVGRTLDLSVIGSYQELYRKLAEMFGIEERSDLLT--HVVYRDANGVTKRIGD 653
Query: 595 DPWHEFCNMVKRIFI---CSSQDVKK 617
+P+ +F KR+ I S +V+K
Sbjct: 654 EPFSDFMRATKRLTIKMDISGDNVRK 679
>gi|4938484|emb|CAB43843.1| transcription factor-like protein [Arabidopsis thaliana]
gi|7269908|emb|CAB81001.1| transcription factor-like protein [Arabidopsis thaliana]
Length = 653
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 193/634 (30%), Positives = 278/634 (43%), Gaps = 103/634 (16%)
Query: 21 LPSKILCRVVNIHLMAEQETDEVYAQITLLP---------EPSQNEPTTPDPCPADSPRP 71
+P +LCRV+ I MA+ E+DEV+A++ L+P E E D +S
Sbjct: 60 IPPMVLCRVLAIKYMADAESDEVFAKLRLIPLKDDEYVDHEYGDGE----DSNGFESNSE 115
Query: 72 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 131
K SF+K LT SD + GGFSV R A P LD N P Q ++AKD+HG W+F+HI
Sbjct: 116 KTPSFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFRHI 175
Query: 132 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR------------ 179
+RG PRRHLLTTGWS FV K+LVAGD+ VF+R ENG+L VG+R R
Sbjct: 176 YRGTPRRHLLTTGWSNFVNQKKLVAGDSIVFMRAENGDLCVGIRRAKRGGIGNGPEYSAG 235
Query: 180 ----QQSSMPSSVI---SSQSMHL---------------GVLATASHAVATQTMFVVYY- 216
S SS++ S S+ V+ A+ A++ + VVYY
Sbjct: 236 WNPIGGSCGYSSLLREDESNSLRRSNCSLADRKGKVTAESVIEAATLAISGRPFEVVYYP 295
Query: 217 KPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKD 274
+ TS+F + A+ + GMR+KM FE EDS F GTV V P W +
Sbjct: 296 RASTSEFCVKALDARAAMRIPWCSGMRFKMAFETEDSSRISWFMGTVSAVNVSDPIRWPN 355
Query: 275 SKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPRLSMEVP--- 330
S WR L+V WDEP + RV+PW +E V++ V P+ L PR M +P
Sbjct: 356 SPWRLLQVAWDEPDLLQNVKRVNPWLVE-LVSN-----VHPIPLTSFSPPRKKMRLPQHP 409
Query: 331 -------PLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNF 383
+ +PS S P S L + V + R + H + SD + +
Sbjct: 410 DYNNLINSIPVPSFPSNPLIRSSPLSSVLDNVPVGLQGARHNAHQYYGLSSSDL--HHYY 467
Query: 384 MSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVE 443
++R P D KN + + +TP NDT ++
Sbjct: 468 LNRPPP----PPPPSSLQLSPSLGLRNIDTKNEKGFCFLTMGTTPC-----NDTKSKK-- 516
Query: 444 TGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAK 503
+ LFG ++ P E++ T +I T ++ S+ +
Sbjct: 517 --------SHIVLFGKLIL-------PEEQLSEKGSTDTANIEKTQISSGGSNQNGVAGR 561
Query: 504 EFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELE 563
EF + SP S+ KV M+ VGR LDL+ L Y+ L +L
Sbjct: 562 EFSSSDEG----SPC-SKKVHDASGLETGHCKVFMESDDVGRTLDLSVLGSYEELSRKLS 616
Query: 564 EMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPW 597
+MF IK + ++Y D G + G++P+
Sbjct: 617 DMFGIK---KSEMLSSVLYRDASGAIKYAGNEPF 647
>gi|400269963|gb|AFP74916.1| auxin response factor 10 [Brassica napus]
Length = 706
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 139/372 (37%), Positives = 185/372 (49%), Gaps = 64/372 (17%)
Query: 20 RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVH----- 74
R+P ILCR+ ++ +A+ ETDEVY++ITLLP P + D +P P V+
Sbjct: 50 RVPPLILCRLASVKFLADAETDEVYSKITLLPLPGNDLDLENDAVLGLTPSPDVNGNEKP 109
Query: 75 -SFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 133
SF+K LT SD + GGFSV R A P LD P Q ++AKD+HG W+F+HI+R
Sbjct: 110 ASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGKTWKFRHIYR 169
Query: 134 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR------------QQ 181
G PRRHLLTTGWSTFV K+L+AGD+ VFLR E G+L VG+R R
Sbjct: 170 GTPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSETGDLCVGIRRAKRGGLGSNGDNNSNSN 229
Query: 182 SSMPS--------SVISSQSMHLGVLATASHAVAT------------------------Q 209
+ P + +S+ M + AT A Q
Sbjct: 230 NPYPGFSGFLRDDEITTSKLMMMKRNATGGGGNANDANAPGGRVRVEAVAEAVARAACGQ 289
Query: 210 TMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVE 266
VVYY PR S +F + + A+ ++ GMR+KM FE EDS F GTV V+
Sbjct: 290 AFEVVYY-PRASTPEFCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQ 348
Query: 267 DFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPR 324
P W +S WR L+V WDEP + R SPW +E + S P + + P PR
Sbjct: 349 VADPIRWPNSPWRLLQVAWDEPDLLQNVKRASPWLVE--LVSNMPAIHLSPF-----SPR 401
Query: 325 LSMEVP-PLDLP 335
+ +P P D P
Sbjct: 402 KKLRIPQPFDFP 413
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 535 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 594
KV M+ VGR LDL+ + Y L +L EMF I+ + T +VY D G +GD
Sbjct: 597 KVFMESEDVGRTLDLSVIGSYQELYRKLAEMFGIEERSDLLT--HVVYRDANGVTKRIGD 654
Query: 595 DPWHEFCNMVKRIFI---CSSQDVKK 617
+P+ +F KR+ I S +V+K
Sbjct: 655 EPFSDFMRATKRLTIKMDISGDNVRK 680
>gi|357150288|ref|XP_003575407.1| PREDICTED: auxin response factor 8-like [Brachypodium distachyon]
Length = 694
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 131/339 (38%), Positives = 175/339 (51%), Gaps = 31/339 (9%)
Query: 18 LFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFS 77
L R+P+ + CRV + MA+ +TDEV+A I L+P + D K SF+
Sbjct: 65 LSRVPALLPCRVAAVRYMADPDTDEVFAGIRLVPLRQDVQDDGAAAAGEDEEHEKPASFA 124
Query: 78 KVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPR 137
K LT SD + GGFSV R A P LD + P Q +VAKD+HG W+F+HI+RG PR
Sbjct: 125 KTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVVAKDVHGASWKFRHIYRGTPR 184
Query: 138 RHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR-----QQSSMPS----SV 188
RHLLTTGWS FV K+LVAGD+ VFLRG+ G+LHVG+R R ++ S+P +
Sbjct: 185 RHLLTTGWSAFVNHKKLVAGDSIVFLRGDAGDLHVGIRRAKRGFCGAEEGSLPGWENQQL 244
Query: 189 ISSQSMHLGV------------------LATASHAVATQTMFVVYYKPRTS--QFIISLN 228
+ M G +A A+ + F V Y PR S +F +
Sbjct: 245 YTMGPMRGGGNVSPSCKGGRRGKVRAEDVAEAARLAGSGQPFEVVYYPRASTPEFCVRAA 304
Query: 229 KYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDE 286
A+ ++ GMR+KM FE EDS F GTV GV+ P W S WR L+V WDE
Sbjct: 305 AVRAAMRVQWCPGMRFKMAFETEDSSRISWFMGTVAGVQVADPIRWPQSPWRLLQVTWDE 364
Query: 287 PASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRL 325
P + RVSPW +E + +L K+PR+
Sbjct: 365 PDLLQNVKRVSPWLVELVSSMPAIHLASSFSPPRKKPRI 403
>gi|15226389|ref|NP_180402.1| auxin response factor 10 [Arabidopsis thaliana]
gi|46576666|sp|Q9SKN5.1|ARFJ_ARATH RecName: Full=Auxin response factor 10
gi|12484203|gb|AAG54000.1|AF336919_1 auxin response factor 10 [Arabidopsis thaliana]
gi|13272405|gb|AAK17141.1|AF325073_1 unknown protein [Arabidopsis thaliana]
gi|4432846|gb|AAD20695.1| unknown protein [Arabidopsis thaliana]
gi|225898553|dbj|BAH30407.1| hypothetical protein [Arabidopsis thaliana]
gi|330253016|gb|AEC08110.1| auxin response factor 10 [Arabidopsis thaliana]
Length = 693
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 142/368 (38%), Positives = 189/368 (51%), Gaps = 60/368 (16%)
Query: 20 RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP---------R 70
R+P ILCRVV++ +A+ ETDEV+A+ITLLP P + D +P +
Sbjct: 50 RVPPLILCRVVSVKFLADAETDEVFAKITLLPLPGNDLDLENDAVLGLTPPSSDGNGNGK 109
Query: 71 PKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKH 130
K SF+K LT SD + GGFSV R A P LD + P Q ++AKD+HG W+F+H
Sbjct: 110 EKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVIAKDIHGETWKFRH 169
Query: 131 IFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR------QQSSM 184
I+RG PRRHLLTTGWSTFV K+L+AGD+ VFLR E+G+L VG+R R S
Sbjct: 170 IYRGTPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKRGGLGSNAGSDN 229
Query: 185 P------------SSVISSQSMHLGVLATA-SHAVAT------------------QTMFV 213
P S+ +S+ M + +A AT Q V
Sbjct: 230 PYPGFSGFLRDDESTTTTSKLMMMKRNGNNDGNAAATGRVRVEAVAEAVARAACGQAFEV 289
Query: 214 VYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP 270
VYY PR S +F + A+ ++ GMR+KM FE EDS F GTV V+ P
Sbjct: 290 VYY-PRASTPEFCVKAADVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADP 348
Query: 271 -HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRLSME 328
W +S WR L+V WDEP + RVSPW +E + S P + + P PR +
Sbjct: 349 IRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVE--LVSNMPTIHLSPF-----SPRKKIR 401
Query: 329 VP-PLDLP 335
+P P + P
Sbjct: 402 IPQPFEFP 409
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 535 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 594
KV M+ VGR LDL+ + Y L +L EMF I+ + T +VY D G + +GD
Sbjct: 584 KVFMESEDVGRTLDLSVIGSYQELYRKLAEMFHIEERSDLLT--HVVYRDANGVIKRIGD 641
Query: 595 DPWHEFCNMVKRIFI 609
+P+ +F KR+ I
Sbjct: 642 EPFSDFMKATKRLTI 656
>gi|326496483|dbj|BAJ94703.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 709
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 136/359 (37%), Positives = 185/359 (51%), Gaps = 51/359 (14%)
Query: 21 LPSKILCRVVNIHLMAEQETDEVYAQITLLP----EPSQNEPTTPDPCPADSP--RPKVH 74
LP+ +LC V + +A+ +TDEV+A+I L+P E EP P +D P R K+
Sbjct: 81 LPALVLCCVAGVRFLADPDTDEVFAKIRLVPVGPGEAGFREPEGLGPLGSDPPEAREKLS 140
Query: 75 SFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG 134
SF+K LT SD + GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG
Sbjct: 141 SFAKTLTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIYRG 200
Query: 135 QPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR-----------CLA----- 178
PRRHLLTTGWSTFV K+LVAGD+ VFLR E+GEL VG+R C++
Sbjct: 201 TPRRHLLTTGWSTFVNQKKLVAGDSIVFLRTEHGELCVGIRRAKRVTCGGMECISGWNAP 260
Query: 179 --------------RQQSSMPSSVISSQS-MHLGVLATASHAVATQTMFVVYYKPRTS-- 221
+ + P+ + + + + + A+ A F V Y PR S
Sbjct: 261 GYGGFSAFLKDEENKMMNGGPAGYVKGRGKVKIADVVEAATLAANSQPFEVVYYPRASTP 320
Query: 222 QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRS 279
+F++ A+ + GMR+KM FE EDS F GT+ V+ P W +S WR
Sbjct: 321 EFVVKAAAMQAAMRIHWCPGMRFKMAFETEDSSRISWFMGTISSVQVADPLRWPNSPWRL 380
Query: 280 LKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVP-----PLD 333
L+V WDEP + VSPW +E V+S P + P PR + VP PLD
Sbjct: 381 LQVTWDEPDLLQNVKCVSPWLVE-LVSSIPPIHLGPF----SPPRKKLRVPQHPDFPLD 434
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 63/160 (39%), Gaps = 18/160 (11%)
Query: 456 LFGIELIN--HATSSAPSEKVPVSSLTTEGHIISTISAAADSDGK-SDIAKEFKEKKQEQ 512
LFG ++ TSS E + + I + + A SDG S I F + E
Sbjct: 548 LFGKAILTEQQMTSSGSRETLSSGATGNSSPISAALKAGNTSDGSGSSICIGFSSQGHEA 607
Query: 513 VQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL 572
S L KV M+ VGR +DL+ YD L L +MF I +
Sbjct: 608 ------------SDLGLEAGHCKVFMESEDVGRTIDLSVFGSYDELYGRLADMFGIDKEE 655
Query: 573 HTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSS 612
T + Y D G +M G P+ +F + +R+ I S
Sbjct: 656 ITS---HLRYRDTAGAVMHTGGLPFSDFMKVARRLTITSG 692
>gi|312282557|dbj|BAJ34144.1| unnamed protein product [Thellungiella halophila]
Length = 702
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 139/375 (37%), Positives = 188/375 (50%), Gaps = 69/375 (18%)
Query: 20 RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRP-------- 71
R+P ILCRVV + +A+ ETDEV+++ITLLP P + D +P P
Sbjct: 50 RVPPLILCRVVAVKFLADAETDEVFSKITLLPLPGNDLDLENDAVLGLTPSPDGNGPNGN 109
Query: 72 -KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKH 130
K SF+K LT SD + GGFSV R A P LD P Q ++AKD+HG W+F+H
Sbjct: 110 EKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRH 169
Query: 131 IFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVIS 190
I+RG PRRHLLTTGWSTFV K+L+AGD+ VFLR E+G+L VG+R R + S+ +
Sbjct: 170 IYRGTPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKR--GGLGSNGVG 227
Query: 191 SQSMHL-------------------------GVLATASHAVA------------------ 207
S + ++ G ++A A
Sbjct: 228 SDNNNIPYPGFSGFLRDDETTTSKLMMMKRSGGNGNDANAAAGGGRVRVEAVAEAVARAA 287
Query: 208 -TQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVV 263
Q VVYY PR S +F + + A+ ++ GMR+KM FE EDS F GTV
Sbjct: 288 RGQAFEVVYY-PRASTPEFCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVS 346
Query: 264 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNK 321
V+ P W +S WR L+V WDEP + RVSPW +E + S P + + P
Sbjct: 347 AVQVADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVE--LVSNMPTIHLSPF----- 399
Query: 322 RPRLSMEVP-PLDLP 335
PR + +P P + P
Sbjct: 400 SPRKKLRIPQPFEFP 414
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 535 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 594
KV M+ VGR LDL+ + Y L +L EMF I+ + T +VY D G + +GD
Sbjct: 593 KVFMESEDVGRTLDLSVIGSYQELYRKLAEMFCIEERSDLLT--HVVYRDANGVIKRIGD 650
Query: 595 DPWHEFCNMVKRIFI 609
+P+ +F KR+ I
Sbjct: 651 EPFSDFMRATKRLTI 665
>gi|357453951|ref|XP_003597256.1| Auxin response factor [Medicago truncatula]
gi|355486304|gb|AES67507.1| Auxin response factor [Medicago truncatula]
Length = 755
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 137/365 (37%), Positives = 184/365 (50%), Gaps = 57/365 (15%)
Query: 19 FRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPR--PKVHSF 76
FR+P ILCRV ++ +A+ ETDEV+++ITL+P +N D D K SF
Sbjct: 107 FRIPPLILCRVASVKFLADSETDEVFSKITLIP--LRNSELENDDSDGDGSENSEKPASF 164
Query: 77 SKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQP 136
+K LT SD + GGFSV R A P LD + P Q ++AKD+HG W+F+HI+RG P
Sbjct: 165 AKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVIAKDVHGEVWKFRHIYRGTP 224
Query: 137 RRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR--------------------- 175
RRHLLTTGWS+FV K+LVAGD+ VFLR E+GEL VG+R
Sbjct: 225 RRHLLTTGWSSFVNQKKLVAGDSIVFLRAESGELFVGIRRAKRGIVNGLETPSGWSSGNG 284
Query: 176 ------------CLARQQSSMPSSVISSQSMHLGVLATASH-----AVATQTMFVVYYKP 218
R+++ + + + V + A + QT VVYY P
Sbjct: 285 NCGLGPYGGAFTAFLREENKLGGVGGNLGGGRVKVSGESVKEAMRLAASNQTFEVVYY-P 343
Query: 219 RTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKD 274
R S +F I + A+ ++ GMR+KM FE EDS F GT+ V+ P W +
Sbjct: 344 RASTPEFCIKTSAVKAAMRIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVVDPIRWPN 403
Query: 275 SKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVP---- 330
S WR L+V WDEP + RVSPW +E N+ LA PR + P
Sbjct: 404 SPWRLLQVTWDEPDLLHNVKRVSPWLVE-----LVSNMSMIHLAPFSPPRKKLRFPQHPD 458
Query: 331 -PLDL 334
PLD+
Sbjct: 459 FPLDV 463
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 63/127 (49%), Gaps = 16/127 (12%)
Query: 498 KSDIAKEFKEKKQEQVQVSPKESQSKQSC--LTSNRSRTKVQMQGVAVGRALDLTTLVGY 555
+S I+++F K S S S C L + KV ++ VGR LDL+ + Y
Sbjct: 614 QSSISEQFSPAK------SSTTSASADFCWQLGLDTGHCKVFLESEDVGRTLDLSCVGSY 667
Query: 556 DHLIDELEEMFDI-KGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFIC---S 611
+ L +L +MF I + ++ +R ++Y D G + G++P+ +F KR+ I
Sbjct: 668 EELYRKLAKMFGIERSEMLSR----VLYRDATGAVKQTGEEPFSDFMKTAKRLTILMDSG 723
Query: 612 SQDVKKM 618
S+D +++
Sbjct: 724 SKDTRRV 730
>gi|255556996|ref|XP_002519531.1| Auxin response factor, putative [Ricinus communis]
gi|223541394|gb|EEF42945.1| Auxin response factor, putative [Ricinus communis]
Length = 702
Score = 211 bits (538), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 133/332 (40%), Positives = 166/332 (50%), Gaps = 50/332 (15%)
Query: 20 RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDP----CPADSPRPKVHS 75
RLP ILCRV I MA+ ETDEVYA+I L P S+ + + K S
Sbjct: 64 RLPPYILCRVSGIKFMADPETDEVYAKIKLTPICSKENGMEDEEEGVINGGEGQENKPAS 123
Query: 76 FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQ 135
F+K LT SD + GGFSV R A P LD + P Q ++AKD+HG W+F+HI+RG
Sbjct: 124 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRHIYRGT 183
Query: 136 PRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSS----VISS 191
PRRHLLTTGWSTFV K+LVAGD+ VFLR ENG+L +G+R R P S +
Sbjct: 184 PRRHLLTTGWSTFVNHKKLVAGDSIVFLRAENGDLCIGIRRAKRGVGGGPESSWNPAGGN 243
Query: 192 QSMHLG-------------------------------------VLATASHAVATQTMFVV 214
M G V+ A+ A Q VV
Sbjct: 244 CVMPYGGFNSFFREDGNKLSRSGNGNGPGENALTGKGKVKAESVIEAATLAANGQPFEVV 303
Query: 215 YYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP- 270
YY PR S +F + + A ++ GMR+KM FE EDS F GT+ V+ P
Sbjct: 304 YY-PRASTPEFCVKASMVKAAFQIRWCSGMRFKMAFETEDSSRISWFMGTIASVQVADPL 362
Query: 271 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 302
W DS WR L+V WDEP + RVSPW +E
Sbjct: 363 RWPDSPWRLLQVTWDEPDLLQNVKRVSPWLVE 394
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 18/146 (12%)
Query: 478 SLTTEGHIIS-TISAAADSDGKSDIAKEFKEKKQEQV--QVSPKES--QSKQSCLTSNRS 532
SL++ G +S ++ + S+G D F + + Q P+ S + Q C NR
Sbjct: 550 SLSSSGDTVSPVLTGNSSSEGNLDKIANFSDGSGSALHQQGLPEHSSYEGFQWC-KGNRQ 608
Query: 533 RT---------KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYT 583
T KV M+ VGR LDL+ L YD L +L +MF I+ ++ T ++Y
Sbjct: 609 ETEPSLETGHCKVFMESEDVGRTLDLSLLGSYDELYRKLADMFGIE---NSETLNNVLYR 665
Query: 584 DDEGDMMLVGDDPWHEFCNMVKRIFI 609
D G + +GD+P+ +F +R+ I
Sbjct: 666 DIAGIVKHIGDEPFSDFMKTARRLTI 691
>gi|297826099|ref|XP_002880932.1| hypothetical protein ARALYDRAFT_481671 [Arabidopsis lyrata subsp.
lyrata]
gi|297326771|gb|EFH57191.1| hypothetical protein ARALYDRAFT_481671 [Arabidopsis lyrata subsp.
lyrata]
Length = 697
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 138/369 (37%), Positives = 184/369 (49%), Gaps = 61/369 (16%)
Query: 20 RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQN-----------EPTTPDPCPADS 68
R+P ILCRVV++ +A+ ETDEV+A+ITLLP P + P + D +
Sbjct: 50 RVPPLILCRVVSVKFLADAETDEVFAKITLLPLPGNDLDLENDAVLGLTPPSSDVNVNGN 109
Query: 69 PRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRF 128
K SF+K LT SD + GGFSV R A P LD P Q ++AKD+HG W+F
Sbjct: 110 GNEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKF 169
Query: 129 KHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPS-- 186
+HI+RG PRRHLLTTGWSTFV K+L+AGD+ VFLR E+G+L VG+R R
Sbjct: 170 RHIYRGTPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKRGGLGSTGLG 229
Query: 187 ----------------SVISSQSMHLGVLATASHAVA------------------TQTMF 212
+ +S+ M + +A A Q
Sbjct: 230 SDNPYPGFSGFLRDDETSTTSKLMMMKRNGNDGNAAAGGRVRVEAVAEAVARAACGQAFE 289
Query: 213 VVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFS 269
VVYY PR S +F + A+ ++ GMR+KM FE EDS F GTV V+
Sbjct: 290 VVYY-PRASTPEFCVKAADVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVAD 348
Query: 270 P-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRLSM 327
P W +S WR L+V WDEP + RVSPW +E + S P + + P PR +
Sbjct: 349 PIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVE--LVSNMPAIHLSPF-----SPRKKI 401
Query: 328 EVP-PLDLP 335
+P P + P
Sbjct: 402 RIPQPFEFP 410
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 535 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 594
KV M+ VGR LDL+ + Y L +L EMF I+ + T +VY D G + +GD
Sbjct: 589 KVFMESEDVGRTLDLSVIGSYQELYRKLAEMFHIEERSDLLT--HVVYRDANGAIKRIGD 646
Query: 595 DPWHEFCNMVKRIFI 609
+P+ +F KR+ I
Sbjct: 647 EPFSDFMKSTKRLTI 661
>gi|168061548|ref|XP_001782750.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665783|gb|EDQ52456.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 595
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 135/336 (40%), Positives = 179/336 (53%), Gaps = 46/336 (13%)
Query: 25 ILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASD 84
I CRVV+++ +A+ ETDEV+A++ L PE + P+ P K SF+K LT SD
Sbjct: 61 IPCRVVSVNFLADTETDEVFARMRLQPEGLHGLNDMTEEAPSSPPPEKPASFAKTLTQSD 120
Query: 85 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 144
+ GGFSV R A PPLD + P Q ++AKD+HG W+F+HI+RG PRRHLLTTG
Sbjct: 121 ANNGGGFSVPRYCAETIFPPLDYSSDPPVQTVLAKDVHGDVWKFRHIYRGTPRRHLLTTG 180
Query: 145 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR----QQSSMPSSVISSQSMHLGVLA 200
WSTFV K+LVAGD VFLR +GEL VGVR R SS S+S G
Sbjct: 181 WSTFVNQKKLVAGDAIVFLRSASGELCVGVRRSMRGAMGDNGHGGSSNGVSRSGSQGAST 240
Query: 201 TASHA-----VATQTM------------FVVYYKPR--TSQFIISLNKYLEAVNNKFAVG 241
T+S A V +++ F V Y PR T++F + +A+++ + G
Sbjct: 241 TSSFARNRARVTAKSVLDAAALAVAGKPFEVVYYPRASTAEFCVKAGLVKQALDHTWYAG 300
Query: 242 MRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPW 299
MR+KM FE EDS F GT+ V+ P W +S WR V WDEP + RVSPW
Sbjct: 301 MRFKMAFETEDSSRISWFMGTIAAVKPADPLLWPNSPWR---VTWDEPDLLQGVSRVSPW 357
Query: 300 EIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLP 335
++E VA+ L M++PP P
Sbjct: 358 QVE-LVAT-----------------LPMQLPPFSYP 375
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Query: 527 LTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDE 586
L+ KV +G VGR LDL Y+ + D L MF + K +VY D E
Sbjct: 514 LSIGTEHCKVFREGDEVGRTLDLANFKSYEEVYDRLAGMFSVPA---ASFKNRVVYQDGE 570
Query: 587 GDMMLVGDDPWHEFCNMVKRIFI 609
G + VG +P+ F V+R+ I
Sbjct: 571 GCTLPVGAEPYGNFVAAVRRLTI 593
>gi|449482590|ref|XP_004156337.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
Length = 701
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 190/636 (29%), Positives = 277/636 (43%), Gaps = 84/636 (13%)
Query: 20 RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCP--ADSPRPKVHSFS 77
++PS LCRV I +A+ +TDEV+A++ L+P D S + K SF+
Sbjct: 62 KVPSYTLCRVSAIKFLADPDTDEVFAKLRLIPINGSELDFEDDGIGRLNGSEQDKPTSFA 121
Query: 78 KVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPR 137
K LT SD + GGFSV R A P LD + P Q ++AKD+HG W+F+HI+RG PR
Sbjct: 122 KTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRHIYRGTPR 181
Query: 138 RHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVI-------- 189
RHLLTTGWSTFV K+LVAGD+ VFLR ENG+L VG+R R P S
Sbjct: 182 RHLLTTGWSTFVNHKKLVAGDSIVFLRAENGDLCVGIRRAKRGIGDGPESSCGWNPAGGN 241
Query: 190 ---------------------SSQSMH-----LG--------VLATASHAVATQTMFVVY 215
S+ M+ +G V A A Q +++
Sbjct: 242 CAVSYGAFSAFLREDDNRLTRSANGMNGNGSLMGKGKVKPESVTEAAKLASNGQPFEIIF 301
Query: 216 YKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-H 271
Y PR S +F + A+ ++ GMR+KM FE EDS F GT+ V+ P
Sbjct: 302 Y-PRASTPEFCVKAALVKAALQIRWCSGMRFKMAFETEDSSRISWFMGTINSVQVSDPLR 360
Query: 272 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPP 331
W +S WR L+V WDEP + RVSPW +E V+S +P + P K+ R
Sbjct: 361 WPESPWRLLQVTWDEPDLLQNVKRVSPWLVE-LVSSMSPIHLAPFSPPRKKFRYPQHP-- 417
Query: 332 LDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDG 391
D P P + + H D H H S + +S+ QS G
Sbjct: 418 -DFPLDNQPPVPSFSSYLHGTGSPFGCPPDNNPAGMQGARHAHFGLSLSDFHVSKLQS-G 475
Query: 392 EWLTSPR--------VKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVE 443
+ R + S + E ++N+S + HST K + + +
Sbjct: 476 LFSIGYRSLDPAAGSTRLSGNVMTEKPSMSENVSCLLTMA-HSTQASKKFDGVKTPQLIL 534
Query: 444 TGRK--TETGTSCRLFG--IELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKS 499
GR TE S G + + SS+ +++L+ S + +G +
Sbjct: 535 FGRPILTELQMSQSFSGDTVSPVGTGNSSSDGNGDKMTNLSDGSG--SALHQQGLPEGSA 592
Query: 500 DIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLI 559
+ F+ K + ++ P + KV M+ VGR LDL++L Y+ L
Sbjct: 593 --GENFQWYKDNRQEIDP----------NLDIGHCKVFMESEDVGRTLDLSSLGSYEELY 640
Query: 560 DELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDD 595
+L MF I ++ T ++Y D G + VGD+
Sbjct: 641 RKLGNMFGID---NSETLNHVLYRDVSGAVKHVGDE 673
>gi|75261153|sp|Q6K223.1|ARFH_ORYSJ RecName: Full=Auxin response factor 8
gi|48717038|dbj|BAD23727.1| putative auxin response factor 10 [Oryza sativa Japonica Group]
gi|215769265|dbj|BAH01494.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623278|gb|EEE57410.1| hypothetical protein OsJ_07601 [Oryza sativa Japonica Group]
Length = 681
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 131/337 (38%), Positives = 176/337 (52%), Gaps = 33/337 (9%)
Query: 20 RLPSKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSK 78
R+P+ + CRV ++ MA+ +TDEV+A+I L+P +++ D A K SF+K
Sbjct: 63 RVPALVPCRVASVRYMADPDTDEVFARIRLVPLRAAEDGDVEEDGAAAGEEHEKPASFAK 122
Query: 79 VLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRR 138
LT SD + GGFSV R A P LD P Q +VAKD+HG W F+HI+RG PRR
Sbjct: 123 TLTQSDANNGGGFSVPRYCAETIFPRLDYAADPPVQTVVAKDVHGVAWNFRHIYRGTPRR 182
Query: 139 HLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR------C---------------- 176
HLLTTGWSTFV K+LVAGD+ VFLRG+ G+LHVG+R C
Sbjct: 183 HLLTTGWSTFVNQKKLVAGDSIVFLRGDGGDLHVGIRRAKRGFCGGGGGAEEASLPGWDQ 242
Query: 177 ---LARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYL 231
L R +S ++ + L A+ F V Y PR S +F +
Sbjct: 243 YGGLMRGNASPCAAAKGRGKVRAEDLVEAARLANGGQPFEVVYYPRASTPEFCVRAAAVR 302
Query: 232 EAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPAS 289
A+ ++ GMR+KM FE EDS F GTV V+ P W S WR L+V WDEP
Sbjct: 303 AAMRVQWCPGMRFKMAFETEDSSRISWFMGTVASVQVADPIRWPQSPWRLLQVTWDEPDL 362
Query: 290 ITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRL 325
+ RVSPW +E + S+ P + + K+PR+
Sbjct: 363 LQNVKRVSPWLVE--LVSSMPAINLSSFSPPRKKPRI 397
>gi|379323224|gb|AFD01311.1| auxin response factor 16-1 [Brassica rapa subsp. pekinensis]
Length = 647
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 145/403 (35%), Positives = 198/403 (49%), Gaps = 56/403 (13%)
Query: 21 LPSKILCRVVNIHLMAEQETDEVYAQITLLP------EPSQNEPTTPDPCPADSPRPKVH 74
+P +LCRV+ I MA+ E+DEV+A++ L+P E E + + K
Sbjct: 60 IPPMVLCRVLAIKYMADPESDEVFAKLKLIPLKDNDHEYRDGEESN---GLGSNNSEKTP 116
Query: 75 SFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG 134
SF+K LT SD + GGFSV R A P LD N P Q ++AKD+HG W+F+HI+RG
Sbjct: 117 SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGEVWKFRHIYRG 176
Query: 135 QPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR------------------- 175
PRRHLLTTGWS FV K+LVAGD+ VF+R ENG+L VG+R
Sbjct: 177 TPRRHLLTTGWSNFVNQKKLVAGDSIVFMRAENGDLCVGIRRAKRGGIGNNGLEYSAGWN 236
Query: 176 -------CLARQQSSMPSSVISSQSMHL---GVLATASHAVATQTMFVVYYKPR--TSQF 223
L R SS ++ + + V+ A AV+ + VVYY PR +S+F
Sbjct: 237 PIGGSYSSLLRDDERRSSSSLADRKGKVTAESVVEAAKLAVSGRGFEVVYY-PRASSSEF 295
Query: 224 IISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLK 281
+ A+ + GMR+KM FE EDS F GTV V P W +S WR L+
Sbjct: 296 CVKALDARAAMRIPWCSGMRFKMAFETEDSSRISWFMGTVSAVSVSDPVRWPNSPWRLLQ 355
Query: 282 VQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPP-------LDL 334
V WDEP + RV+PW +E V++ V P++ PR M +P + +
Sbjct: 356 VAWDEPDLLQYVKRVNPWLVE-LVSN-----VHPIIPSFSPPRKKMRLPQHPDYNTRISV 409
Query: 335 PSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDF 377
PS AS P S L + V + R + H + SD
Sbjct: 410 PSFASNPLIRSSPLSSVLDNVPVGLQGARHNAHQYYGLSSSDL 452
>gi|218191212|gb|EEC73639.1| hypothetical protein OsI_08153 [Oryza sativa Indica Group]
Length = 681
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 134/338 (39%), Positives = 177/338 (52%), Gaps = 35/338 (10%)
Query: 20 RLPSKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSK 78
R+P+ + CRV ++ MA+ +TDEV+A+I L+P +++ D A K SF+K
Sbjct: 63 RVPALVPCRVASVRYMADPDTDEVFARIRLVPLRAAEDGDVEEDGAAAGEEHEKPASFAK 122
Query: 79 VLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRR 138
LT SD + GGFSV R A P LD P Q +VAKD+HG W F+HI+RG PRR
Sbjct: 123 TLTQSDANNGGGFSVPRYCAETIFPRLDYAADPPVQTVVAKDVHGVAWNFRHIYRGTPRR 182
Query: 139 HLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR------------------Q 180
HLLTTGWSTFV K+LVAGD+ VFLRG+ G+LHVG+R R Q
Sbjct: 183 HLLTTGWSTFVNQKKLVAGDSIVFLRGDGGDLHVGIRRAKRGFCGGGGGAEEASLPGWDQ 242
Query: 181 QSSMPSSVISSQSMHLG--------VLATASHAVATQTMFVVYYKPRTS--QFIISLNKY 230
+ S + G V+ A A Q VVYY PR S +F +
Sbjct: 243 YGGLMRGNASPCAAAKGRGKVRAEDVVEAARLASGGQPFEVVYY-PRASTPEFCVRAAAV 301
Query: 231 LEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPA 288
A+ ++ GMR+KM FE EDS F GTV V+ P W S WR L+V WDEP
Sbjct: 302 RAAMRVQWCPGMRFKMAFETEDSSRISWFMGTVASVQVADPIRWPQSPWRLLQVTWDEPD 361
Query: 289 SITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRL 325
+ RVSPW +E + S+ P + + K+PR+
Sbjct: 362 LLQNVKRVSPWLVE--LVSSMPAIHLSSFSPPRKKPRI 397
>gi|110289274|gb|AAP54297.2| Auxin response factor 16, putative, expressed [Oryza sativa
Japonica Group]
gi|222613018|gb|EEE51150.1| hypothetical protein OsJ_31911 [Oryza sativa Japonica Group]
Length = 760
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 139/359 (38%), Positives = 180/359 (50%), Gaps = 54/359 (15%)
Query: 21 LPSKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQNEPTTPDP-CP------ADSPRP- 71
LP +LCRV + +A++++DEVYA+I L P P + E PD CP A P P
Sbjct: 126 LPPLVLCRVEGVQFLADRDSDEVYAKIRLAPVAPGEAEFREPDELCPLGAAGDAAEPSPE 185
Query: 72 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 131
K SF+K LT SD + GGFSV R A P LD P Q ++AKD+HG W+F+HI
Sbjct: 186 KPTSFAKTLTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGVVWKFRHI 245
Query: 132 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISS 191
+RG PRRHLLTTGWSTFV K+LVAGD+ VFLR +GEL VG+R R +
Sbjct: 246 YRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRTRHGELCVGIRRAKRMACGGMECMSGW 305
Query: 192 QSMHLG-----------------------------------VLATASHAVATQTMFVVYY 216
+ G V+ AS A + Q V YY
Sbjct: 306 NAPGYGGGGFSAFLKEEESKLMKGHGGGGYMKGKGKVRMADVVEAASLASSGQPFEVAYY 365
Query: 217 KPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSPH-W 272
PR S F++ A+ ++ GMR+KM FE EDS F GT+ V+ P+ W
Sbjct: 366 -PRASTPDFVVKAASVQAAMRIQWCSGMRFKMAFETEDSSRISWFMGTISSVQVADPNRW 424
Query: 273 KDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPP 331
+S WR L+V WDEP + VSPW +E V+S P + P PR + VPP
Sbjct: 425 PNSPWRLLQVTWDEPDLLQNVKCVSPWLVE-LVSSIPPIHLGPF----SSPRKKLRVPP 478
>gi|75261833|sp|Q9AV47.1|ARFV_ORYSJ RecName: Full=Auxin response factor 22
gi|13384374|gb|AAK21342.1|AC024594_6 putative transcription factor [Oryza sativa Japonica Group]
Length = 698
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 139/359 (38%), Positives = 180/359 (50%), Gaps = 54/359 (15%)
Query: 21 LPSKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQNEPTTPDP-CP------ADSPRP- 71
LP +LCRV + +A++++DEVYA+I L P P + E PD CP A P P
Sbjct: 64 LPPLVLCRVEGVQFLADRDSDEVYAKIRLAPVAPGEAEFREPDELCPLGAAGDAAEPSPE 123
Query: 72 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 131
K SF+K LT SD + GGFSV R A P LD P Q ++AKD+HG W+F+HI
Sbjct: 124 KPTSFAKTLTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGVVWKFRHI 183
Query: 132 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISS 191
+RG PRRHLLTTGWSTFV K+LVAGD+ VFLR +GEL VG+R R +
Sbjct: 184 YRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRTRHGELCVGIRRAKRMACGGMECMSGW 243
Query: 192 QSMHLG-----------------------------------VLATASHAVATQTMFVVYY 216
+ G V+ AS A + Q V YY
Sbjct: 244 NAPGYGGGGFSAFLKEEESKLMKGHGGGGYMKGKGKVRMADVVEAASLASSGQPFEVAYY 303
Query: 217 KPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSPH-W 272
PR S F++ A+ ++ GMR+KM FE EDS F GT+ V+ P+ W
Sbjct: 304 -PRASTPDFVVKAASVQAAMRIQWCSGMRFKMAFETEDSSRISWFMGTISSVQVADPNRW 362
Query: 273 KDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPP 331
+S WR L+V WDEP + VSPW +E V+S P + P PR + VPP
Sbjct: 363 PNSPWRLLQVTWDEPDLLQNVKCVSPWLVE-LVSSIPPIHLGPF----SSPRKKLRVPP 416
>gi|158563894|sp|Q01I35.2|ARFJ_ORYSI RecName: Full=Auxin response factor 10
gi|158563995|sp|Q7XKK6.3|ARFJ_ORYSJ RecName: Full=Auxin response factor 10
gi|218195228|gb|EEC77655.1| hypothetical protein OsI_16669 [Oryza sativa Indica Group]
Length = 699
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 132/337 (39%), Positives = 171/337 (50%), Gaps = 44/337 (13%)
Query: 20 RLPSKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQ------NEPTTPDPCPADSPRPK 72
R+P + CRVV + MA+ E+DEV+A+I L+P P ++ RP+
Sbjct: 62 RVPPLVPCRVVAVRFMADAESDEVFAKIRLVPLRPGDAVVDVGEAAAAEARREEENSRPR 121
Query: 73 VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIF 132
SF+K LT SD + GGFSV R A P LD + P Q + AKD+HG EW F+HI+
Sbjct: 122 PTSFAKTLTQSDANNGGGFSVPRFCAETIFPELDYSSEPPVQSVCAKDVHGVEWTFRHIY 181
Query: 133 RGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPS-----S 187
RG PRRHLLTTGWS FV K+L AGD+ VF+R E G +HVG+R R S+ S
Sbjct: 182 RGTPRRHLLTTGWSPFVNKKQLTAGDSIVFMRDEGGNIHVGLRRAKRGFCSIGGDDESLS 241
Query: 188 VISSQSMHLG-------------------------VLATASHAVATQTMFVVYYKPRTS- 221
I + G VL A+ A Q V+YY PR S
Sbjct: 242 SIPGWDQYRGLMRRNATATATGGRTPPKGKVPPENVLTAATRATTGQPFEVLYY-PRAST 300
Query: 222 -QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWR 278
+F + A+ ++ GMR+KM FE EDS F GTV GV+ P W S WR
Sbjct: 301 PEFCVRAAAVRTAMAVQWCPGMRFKMAFETEDSSRISWFMGTVAGVQASDPVRWPQSPWR 360
Query: 279 SLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQP 315
L+V WDEP + RV PW +E + S+ PNL P
Sbjct: 361 LLQVTWDEPELLQNVKRVCPWLVE--LVSSMPNLHLP 395
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 522 SKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIV 581
S+ S N + KV ++ VGR+LDL+ L ++ L L +MF I G R+ +V
Sbjct: 604 SRASEYELNPGQCKVFVESETVGRSLDLSALSSFEELYACLSDMFSI-GSDELRS--HLV 660
Query: 582 YTDDEGDMMLVGDDPWHEFCNMVKRIFI 609
Y G++ GD+P+ F +++ I
Sbjct: 661 YRSPAGEVKHAGDEPFCAFVKSARKLRI 688
>gi|21741865|emb|CAD41455.1| OSJNBa0019D11.3 [Oryza sativa Japonica Group]
gi|38344647|emb|CAE05633.2| OSJNBb0061C13.15 [Oryza sativa Japonica Group]
gi|116310816|emb|CAH67605.1| OSIGBa0145G11.4 [Oryza sativa Indica Group]
Length = 695
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 132/337 (39%), Positives = 171/337 (50%), Gaps = 44/337 (13%)
Query: 20 RLPSKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQ------NEPTTPDPCPADSPRPK 72
R+P + CRVV + MA+ E+DEV+A+I L+P P ++ RP+
Sbjct: 58 RVPPLVPCRVVAVRFMADAESDEVFAKIRLVPLRPGDAVVDVGEAAAAEARREEENSRPR 117
Query: 73 VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIF 132
SF+K LT SD + GGFSV R A P LD + P Q + AKD+HG EW F+HI+
Sbjct: 118 PTSFAKTLTQSDANNGGGFSVPRFCAETIFPELDYSSEPPVQSVCAKDVHGVEWTFRHIY 177
Query: 133 RGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPS-----S 187
RG PRRHLLTTGWS FV K+L AGD+ VF+R E G +HVG+R R S+ S
Sbjct: 178 RGTPRRHLLTTGWSPFVNKKQLTAGDSIVFMRDEGGNIHVGLRRAKRGFCSIGGDDESLS 237
Query: 188 VISSQSMHLG-------------------------VLATASHAVATQTMFVVYYKPRTS- 221
I + G VL A+ A Q V+YY PR S
Sbjct: 238 SIPGWDQYRGLMRRNATATATGGRTPPKGKVPPENVLTAATRATTGQPFEVLYY-PRAST 296
Query: 222 -QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWR 278
+F + A+ ++ GMR+KM FE EDS F GTV GV+ P W S WR
Sbjct: 297 PEFCVRAAAVRTAMAVQWCPGMRFKMAFETEDSSRISWFMGTVAGVQASDPVRWPQSPWR 356
Query: 279 SLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQP 315
L+V WDEP + RV PW +E + S+ PNL P
Sbjct: 357 LLQVTWDEPELLQNVKRVCPWLVE--LVSSMPNLHLP 391
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 522 SKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIV 581
S+ S N + KV ++ VGR+LDL+ L ++ L L +MF I G R+ +V
Sbjct: 600 SRASEYELNPGQCKVFVESETVGRSLDLSALSSFEELYACLSDMFSI-GSDELRS--HLV 656
Query: 582 YTDDEGDMMLVGDDPWHEFCNMVKRIFI 609
Y G++ GD+P+ F +++ I
Sbjct: 657 YRSPAGEVKHAGDEPFCAFVKSARKLRI 684
>gi|218184755|gb|EEC67182.1| hypothetical protein OsI_34050 [Oryza sativa Indica Group]
Length = 690
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 139/359 (38%), Positives = 180/359 (50%), Gaps = 54/359 (15%)
Query: 21 LPSKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQNEPTTPDP-CP------ADSPRP- 71
LP +LCRV + +A++++DEVYA+I L P P + E PD CP A P P
Sbjct: 84 LPPLVLCRVEGVQFLADRDSDEVYAKIRLAPVAPGEAEFREPDELCPLGAAGDAAEPSPE 143
Query: 72 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 131
K SF+K LT SD + GGFSV R A P LD P Q ++AKD+HG W+F+HI
Sbjct: 144 KPTSFAKTLTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGVVWKFRHI 203
Query: 132 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISS 191
+RG PRRHLLTTGWSTFV K+LVAGD+ VFLR +GEL VG+R R +
Sbjct: 204 YRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRTRHGELCVGIRRAKRMACGGMECMSGW 263
Query: 192 QSMHLG-----------------------------------VLATASHAVATQTMFVVYY 216
+ G V+ AS A + Q V YY
Sbjct: 264 NAPGYGGGGFSAFLKEEESKLMKGHGGGGYMKGKGKVRMADVVEAASLASSGQPFEVAYY 323
Query: 217 KPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPE-RRFSGTVVGVEDFSPH-W 272
PR S F++ A+ ++ GMR+KM FE EDS F GT+ V+ P+ W
Sbjct: 324 -PRASTPDFVVKAASVQAAMRIQWCSGMRFKMAFETEDSSRISWFMGTISSVQVADPNRW 382
Query: 273 KDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPP 331
+S WR L+V WDEP + VSPW +E V+S P + P PR + VPP
Sbjct: 383 PNSPWRLLQVTWDEPDLLQNVKCVSPWLVE-LVSSIPPIHLGPF----SSPRKKLRVPP 436
>gi|413923141|gb|AFW63073.1| hypothetical protein ZEAMMB73_321944 [Zea mays]
Length = 689
Score = 208 bits (529), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 130/318 (40%), Positives = 171/318 (53%), Gaps = 36/318 (11%)
Query: 20 RLPSKILCRVVNIHLMAEQETDEVYAQITLLP----EPSQNEPTTPDPCPADSPRPKVHS 75
R+P+ + CRV + MA+ +TDEV+A+I L+P + + D A + K S
Sbjct: 65 RVPALVPCRVTAVRYMADPDTDEVFARIRLVPLRGGDADADAGGVEDDAAAADEQEKPAS 124
Query: 76 FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQ 135
F+K LT SD + GGFSV R A P LD P Q +VAKD+HG W+F+HI+RG
Sbjct: 125 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYAADPPVQTVVAKDVHGAAWKFRHIYRGT 184
Query: 136 PRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPS-----SVIS 190
PRRHLLTTGWSTFV K+LVAGD+ VFLRG++G+LHVG+R R S +
Sbjct: 185 PRRHLLTTGWSTFVNQKKLVAGDSIVFLRGDSGDLHVGIRRAKRGFCGAGGGGGDDSPAA 244
Query: 191 SQSMHLGVL---------ATASHAV-------------ATQTMFVVYYKPRTS--QFIIS 226
+ G++ A A V A Q+ VVYY PR S +F +
Sbjct: 245 GWDHYAGLMRGNVSPCAAAKARGKVRPEDVAEAARLAAAGQSFEVVYY-PRASTPEFCVR 303
Query: 227 LNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQW 284
A+ +++ GMR+KM FE EDS F GTV GV+ P W S WR L+V W
Sbjct: 304 AAAVRVAMRVQWSPGMRFKMAFETEDSSRISWFMGTVAGVQVTDPIRWPQSPWRLLQVTW 363
Query: 285 DEPASITRPDRVSPWEIE 302
DEP + RVSPW +E
Sbjct: 364 DEPDLLQNVKRVSPWLVE 381
>gi|356550188|ref|XP_003543470.1| PREDICTED: auxin response factor 18-like [Glycine max]
Length = 670
Score = 208 bits (529), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 127/323 (39%), Positives = 170/323 (52%), Gaps = 42/323 (13%)
Query: 15 RIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKV 73
RIP+ P ILCRV + +A+ ETDEV+A++ L+P S+ + D K
Sbjct: 51 RIPI---PPLILCRVAAVKFLADPETDEVFARLRLVPLRNSELDYEDSDANGEAEGSEKP 107
Query: 74 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 133
SF+K LT SD + GGFSV R A P LD + P Q ++A+D+HG W+F+HI+R
Sbjct: 108 ASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVIARDVHGEVWKFRHIYR 167
Query: 134 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPS------- 186
G PRRHLLTTGWS+FV K+LVAGD+ VFLR ENG+L VG+R R P
Sbjct: 168 GTPRRHLLTTGWSSFVNQKKLVAGDSIVFLRAENGDLCVGIRRAKRGGVGGPEGPCGWSS 227
Query: 187 ------------------------SVISSQSMHLGVLATASHAVATQTMFVVYY-KPRTS 221
+ +S +S+ V AS+ Q VVYY + T
Sbjct: 228 YGSGGLGLGPYGAFSGFMREESGRAKVSGESVREAVTLAASN----QAFEVVYYPRANTP 283
Query: 222 QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRS 279
+F I + A+ ++ GMR+KM FE EDS F GT+ V+ P W +S WR
Sbjct: 284 EFCIRTSAVRGAMRIQWCSGMRFKMPFETEDSSRISWFMGTIASVQVLDPIRWPNSPWRL 343
Query: 280 LKVQWDEPASITRPDRVSPWEIE 302
L+V WDEP + RVSPW +E
Sbjct: 344 LQVSWDEPDLLHNVKRVSPWLVE 366
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 527 LTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDE 586
L S+ S KV M+ VGR LDL+ L Y L L MF I+ + ++Y D
Sbjct: 553 LGSDTSHCKVFMESEDVGRTLDLSCLSSYQELYMRLANMFGIE---RSDMLSHVLYCDSS 609
Query: 587 GDMMLVGDDPWHEFCNMVKRIFICSSQDVK 616
G + +G++P+ EF KR+ I + + K
Sbjct: 610 GALKQIGEEPFSEFMKTAKRLTILTDSNNK 639
>gi|295844304|gb|ADG43149.1| auxin response factor 15 [Zea mays]
Length = 711
Score = 208 bits (529), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 130/318 (40%), Positives = 171/318 (53%), Gaps = 36/318 (11%)
Query: 20 RLPSKILCRVVNIHLMAEQETDEVYAQITLLP----EPSQNEPTTPDPCPADSPRPKVHS 75
R+P+ + CRV + MA+ +TDEV+A+I L+P + + D A + K S
Sbjct: 65 RVPALVPCRVTAVRYMADPDTDEVFARIRLVPLRGGDADADAGGVEDDAAAADEQEKPAS 124
Query: 76 FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQ 135
F+K LT SD + GGFSV R A P LD P Q +VAKD+HG W+F+HI+RG
Sbjct: 125 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYAADPPVQTVVAKDVHGAAWKFRHIYRGT 184
Query: 136 PRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPS-----SVIS 190
PRRHLLTTGWSTFV K+LVAGD+ VFLRG++G+LHVG+R R S +
Sbjct: 185 PRRHLLTTGWSTFVNQKKLVAGDSIVFLRGDSGDLHVGIRRAKRGFCGAGGGGGDDSPAA 244
Query: 191 SQSMHLGVL---------ATASHAV-------------ATQTMFVVYYKPRTS--QFIIS 226
+ G++ A A V A Q+ VVYY PR S +F +
Sbjct: 245 GWDHYAGLMRGNVSPCAAAKARGKVRPEDVAEAARLAAAGQSFEVVYY-PRASTPEFCVR 303
Query: 227 LNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQW 284
A+ +++ GMR+KM FE EDS F GTV GV+ P W S WR L+V W
Sbjct: 304 AAAVRVAMRVQWSPGMRFKMAFETEDSSRISWFMGTVAGVQVTDPIRWPQSPWRLLQVTW 363
Query: 285 DEPASITRPDRVSPWEIE 302
DEP + RVSPW +E
Sbjct: 364 DEPDLLQNVKRVSPWLVE 381
>gi|295844312|gb|ADG43153.1| auxin response factor 19 [Zea mays]
gi|413934598|gb|AFW69149.1| hypothetical protein ZEAMMB73_407032 [Zea mays]
Length = 716
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 130/336 (38%), Positives = 172/336 (51%), Gaps = 50/336 (14%)
Query: 16 IPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLP----EPSQNEPTTPDPCPADSPRP 71
+P R+P+ +LCRV + MA+ +TDEV+A+I L P EP + + +
Sbjct: 50 LPAGRVPALVLCRVAAVRFMADPDTDEVFAKIRLAPVRPNEPGYADDAIGAAAASGAQED 109
Query: 72 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 131
K SF+K LT SD + GGFSV R A P LD + P Q ++AKD+HG W+F+HI
Sbjct: 110 KPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHI 169
Query: 132 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSV--- 188
+RG PRRHLLTTGWSTFV K+LVAGD+ VF+R ENG+L VG+R + P +
Sbjct: 170 YRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFMRTENGDLCVGIRRAKKGGIGGPEFMHHH 229
Query: 189 -----------ISSQSMHLG---------------------------VLATASHAVATQT 210
+ SM L V+ A+ AV+ Q
Sbjct: 230 HQQPPPPQGGGYAGFSMFLRGEEDGGKMMAAAATRGKAARVRVRPEEVVEAANLAVSGQP 289
Query: 211 MFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVED 267
VVYY PR S +F + A+ ++ GMR+KM FE EDS F GTV V
Sbjct: 290 FEVVYY-PRASTPEFCVKAGAVRAAMRTQWCPGMRFKMAFETEDSSRISWFMGTVSAVHV 348
Query: 268 FSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 302
P W +S WR L+V WDEP + RVSPW +E
Sbjct: 349 ADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVE 384
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
Query: 534 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI-KGQLHTRTKWEIVYTDD-EGDMML 591
KV MQ VGR LDL+ + Y+ L L +MF + K +L + + Y DD G +
Sbjct: 632 CKVFMQSEDVGRTLDLSAVASYEELYQRLADMFGVDKAELTS----HVFYRDDASGALKH 687
Query: 592 VGDDPWHEFCNMVKRIFICSSQ 613
GD+P+ EF +R+ I + +
Sbjct: 688 PGDEPFSEFTKTARRLTILTDE 709
>gi|302772062|ref|XP_002969449.1| hypothetical protein SELMODRAFT_451564 [Selaginella moellendorffii]
gi|300162925|gb|EFJ29537.1| hypothetical protein SELMODRAFT_451564 [Selaginella moellendorffii]
Length = 779
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 137/379 (36%), Positives = 185/379 (48%), Gaps = 65/379 (17%)
Query: 16 IPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPS----------QNEPTTPDPC 64
IP F R ILCRV+++ +A+ ETDEVYA++ L PE + +E P
Sbjct: 58 IPDFPRSGGTILCRVISVDFLADAETDEVYAKMKLQPEVAPAPLFGTRMGDDEELVSSPT 117
Query: 65 PADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGY 124
+ P SF+K LT SD + GGFSV R A P LD + P Q ++AKD+HG
Sbjct: 118 VVEKP----ASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSIDPPVQTVLAKDVHGE 173
Query: 125 EWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSM 184
W+F+HI+RG PRRHLLTTGWSTFV K+LVAGD VFLR +GEL VGVR R +
Sbjct: 174 IWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDAIVFLRSASGELCVGVRRSMRGPGNG 233
Query: 185 PSSV----ISSQSMHLGVLATASHAVATQTM------------------------FVVYY 216
S + QS + +L+ + + F V Y
Sbjct: 234 DSGISWHSSPGQSGYSELLSGNGSGTSGASFARNRARVTSKSVLEAASLAAAGQAFEVVY 293
Query: 217 KPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HW 272
PR T++F + + ++ + + GMR+KM FE EDS F GT+ V+ P W
Sbjct: 294 YPRASTAEFCVRASVVKASLEHSWYPGMRFKMAFETEDSSRISWFMGTISAVQPADPIRW 353
Query: 273 KDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPL 332
S WR L+V WDEP + +RVSPW++E LV L M++PP
Sbjct: 354 PSSPWRILQVSWDEPDLLQGVNRVSPWQVE---------LVS---------TLPMQLPPF 395
Query: 333 DLPSAASAPWSARLAQSHN 351
LP P + +S
Sbjct: 396 SLPRKKIRPLDLQFGESQG 414
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 535 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI-KGQLHTRTKWEIVYTDDEGDMMLVG 593
K+ + VGR LDL+ Y+ L D L MF + K +L R +VY D EG + +G
Sbjct: 692 KIFFEKEEVGRTLDLSLFGNYEELYDRLASMFTMDKSKLSGR----VVYRDLEGSTIYIG 747
Query: 594 DDPWHEFCNMVKRIFICS 611
+P+ F V+R+ I +
Sbjct: 748 GEPYGNFVKSVRRLTILA 765
>gi|300373061|gb|ADG43151.1| auxin response factor 17 [Zea mays]
gi|413934018|gb|AFW68569.1| hypothetical protein ZEAMMB73_208127 [Zea mays]
Length = 644
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 134/332 (40%), Positives = 175/332 (52%), Gaps = 45/332 (13%)
Query: 21 LPSKILCRVVNIHLMAEQETDEVYAQITLLP----EPSQNEPTTPDPCPADSPRPKVHSF 76
LP +LC V + +A+ ETDEV+A+I L+P E EP P D+ R K+ SF
Sbjct: 60 LPPLVLCTVAGVRFLADPETDEVFAKIRLVPAAPGEVEFGEPREFGIDPEDA-REKLSSF 118
Query: 77 SKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQP 136
+K LT SD + GGFSV R A P LD P Q ++AKD+HG W+F+HIFRG P
Sbjct: 119 AKTLTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIFRGTP 178
Query: 137 RRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQ-------SSMPSSVI 189
RRHLLTTGWS FV K+LVAGD+ VFLR E+GEL VG+R R S + V
Sbjct: 179 RRHLLTTGWSAFVNQKKLVAGDSIVFLRTEHGELCVGIRRAKRVSCGGMECISGWNAPVY 238
Query: 190 SSQSMHL------------------------GVLATASHAVATQTMFVVYYKPRTS--QF 223
+ S L V+ AS A + Q VVYY PR S +F
Sbjct: 239 GALSAFLKDEEGKITKGPGGYMRGRGKVEITDVVEAASLAASGQPFEVVYY-PRASTPEF 297
Query: 224 IISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVG--VEDFSPHWKDSKWRSL 280
++ A+ N++ GMR+KM FE EDS F GT+ V D + W +S WR L
Sbjct: 298 VVKAASVQNAMRNQWCPGMRFKMAFETEDSSRISWFMGTIASAQVAD-TIRWPNSPWRLL 356
Query: 281 KVQWDEPASITRPDRVSPWEIEPFVASATPNL 312
+V WDEP + V+PW +E + S+ P +
Sbjct: 357 QVSWDEPDLLQNVKCVNPWLVE--IVSSIPPI 386
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 3/98 (3%)
Query: 523 KQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVY 582
K S L KV M+ VGR +DL+ Y+ L +L +MF I+ R + Y
Sbjct: 541 KASELGLEDGHCKVFMESEDVGRTIDLSVFGSYEELYGQLADMFGIEKAEIMR---HLCY 597
Query: 583 TDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 620
D G + G++P+++F + +R+ I + + P
Sbjct: 598 RDAAGAVRHTGEEPFNDFMKVARRLTIIEGTEGRPQKP 635
>gi|19352051|dbj|BAB85919.1| auxin response factor 10 [Oryza sativa]
Length = 700
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 137/365 (37%), Positives = 182/365 (49%), Gaps = 56/365 (15%)
Query: 16 IPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE-------PTTPDPCPADS 68
P R+P+ +LCRV + MA+ +TDEV+A+I L+P + + A +
Sbjct: 61 FPGGRVPALVLCRVAGVRFMADPDTDEVFAKIRLVPVRANEQGYAGDADDGIGAAAAAAA 120
Query: 69 PRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRF 128
K SF+K LT SD + GGFSV R A P LD + P Q ++AKD+HG W+F
Sbjct: 121 QEEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKF 180
Query: 129 KHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSV 188
+HI+RG PRRHLLTTGWSTFV K+LVAGD+ VF+R ENG+L VG+R + P +
Sbjct: 181 RHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFMRTENGDLCVGIRRAKKGGVGGPEFL 240
Query: 189 ---------------ISSQSMHLG------------------------VLATASHAVATQ 209
SM L V+ A+ AV+ Q
Sbjct: 241 PPPPPPPPTPAAGGNYGGFSMFLRGDDDGNKMAAAARGKVRARVRPEEVVEAANLAVSGQ 300
Query: 210 TMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVE 266
VVYY PR S +F + A+ ++ GMR+KM FE EDS F GTV V+
Sbjct: 301 PFEVVYY-PRASTPEFCVKAGAVRAAMRTQWFAGMRFKMAFETEDSSRISWFMGTVSAVQ 359
Query: 267 DFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRL 325
P W +S WR L+V WDEP + RVSPW +E + S P + LA PR
Sbjct: 360 VADPIRWPNSPWRLLQVSWDEPDLLQNVKRVSPWLVE--LVSNMPAI---HLAPFSPPRK 414
Query: 326 SMEVP 330
+ VP
Sbjct: 415 KLCVP 419
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 535 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI-KGQLHTRTKWEIVYTDDEGDMMLVG 593
KV MQ VGR LDL+ + Y+ L L +MF I K +L + + Y D G + G
Sbjct: 618 KVFMQSEDVGRTLDLSVVGSYEELYRRLADMFGIEKAELMS----HVFYRDAAGALKHTG 673
Query: 594 DDPWHEFCNMVKRIFICS 611
D+P+ EF +R+ I +
Sbjct: 674 DEPFSEFTKTARRLNILT 691
>gi|115469600|ref|NP_001058399.1| Os06g0685700 [Oryza sativa Japonica Group]
gi|75253259|sp|Q653H7.1|ARFR_ORYSJ RecName: Full=Auxin response factor 18; AltName: Full=OsARF10
gi|52076670|dbj|BAD45570.1| putative auxin response factor 10 [Oryza sativa Japonica Group]
gi|52077007|dbj|BAD46040.1| putative auxin response factor 10 [Oryza sativa Japonica Group]
gi|113596439|dbj|BAF20313.1| Os06g0685700 [Oryza sativa Japonica Group]
gi|215713413|dbj|BAG94550.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 700
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 137/365 (37%), Positives = 182/365 (49%), Gaps = 56/365 (15%)
Query: 16 IPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE-------PTTPDPCPADS 68
P R+P+ +LCRV + MA+ +TDEV+A+I L+P + + A +
Sbjct: 61 FPGGRVPALVLCRVAGVRFMADPDTDEVFAKIRLVPVRANEQGYAGDADDGIGAAAAAAA 120
Query: 69 PRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRF 128
K SF+K LT SD + GGFSV R A P LD + P Q ++AKD+HG W+F
Sbjct: 121 QEEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKF 180
Query: 129 KHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSV 188
+HI+RG PRRHLLTTGWSTFV K+LVAGD+ VF+R ENG+L VG+R + P +
Sbjct: 181 RHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFMRTENGDLCVGIRRAKKGGVGGPEFL 240
Query: 189 ---------------ISSQSMHLG------------------------VLATASHAVATQ 209
SM L V+ A+ AV+ Q
Sbjct: 241 PPPPPPPPTPAAGGNYGGFSMFLRGDDDGNKMAAAARGKVRARVRPEEVVEAANLAVSGQ 300
Query: 210 TMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVE 266
VVYY PR S +F + A+ ++ GMR+KM FE EDS F GTV V+
Sbjct: 301 PFEVVYY-PRASTPEFCVKAGAVRAAMRTQWFAGMRFKMAFETEDSSRISWFMGTVSAVQ 359
Query: 267 DFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRL 325
P W +S WR L+V WDEP + RVSPW +E + S P + LA PR
Sbjct: 360 VADPIRWPNSPWRLLQVSWDEPDLLQNVKRVSPWLVE--LVSNMPAI---HLAPFSPPRK 414
Query: 326 SMEVP 330
+ VP
Sbjct: 415 KLCVP 419
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 535 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI-KGQLHTRTKWEIVYTDDEGDMMLVG 593
KV MQ VGR LDL+ + Y+ L L +MF I K +L + + Y D G + G
Sbjct: 618 KVFMQSEDVGRTLDLSVVGSYEELYRRLADMFGIEKAELMS----HVFYRDAAGALKHTG 673
Query: 594 DDPWHEFCNMVKRIFICS 611
D+P+ EF +R+ I +
Sbjct: 674 DEPFSEFTKTARRLNILT 691
>gi|341657336|gb|ADN92995.2| auxin response factor ARF16 [Ipomoea nil]
Length = 443
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 130/333 (39%), Positives = 168/333 (50%), Gaps = 49/333 (14%)
Query: 18 LFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRP---KVH 74
L ++P ILCRV + +A+ ETDEVYA+I L+P NEP D S K
Sbjct: 51 LPKIPPLILCRVGAVKYLADVETDEVYAKIRLVPV-GNNEPEFEDAVLGSSASETAEKPT 109
Query: 75 SFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG 134
SF+K LT SD + GGFSV R A P LD P Q +VAKD+HG W+F+HI+RG
Sbjct: 110 SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGETWKFRHIYRG 169
Query: 135 QPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQS---SMPSSVISS 191
PRRHLLTTGWSTFV K+LVAGD+ VFLR +NG+L VG+R R + PS +
Sbjct: 170 TPRRHLLTTGWSTFVNQKKLVAGDSIVFLRADNGDLCVGIRRAKRCGNIGLDAPSGWNTG 229
Query: 192 QSMHLGVLAT--------------------------------------ASHAVATQTMFV 213
G + A++ AT F
Sbjct: 230 APGSYGGFSAYLREDENRIKRTGINGNPNSSGGGFKERGKVKPKSVIEAAYLAATGQPFE 289
Query: 214 VYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPE-RRFSGTVVGVEDFSP 270
V Y PR T +F + + A+ ++ G+R+KM FE EDS F GT+ V+ P
Sbjct: 290 VVYYPRANTPEFCVRASSVNAAMGLQWCSGLRFKMPFETEDSSRISWFMGTISSVQVADP 349
Query: 271 -HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 302
HW +S WR L+V WDEP + VSPW +E
Sbjct: 350 IHWPNSPWRLLQVTWDEPDLLQNVKHVSPWLVE 382
>gi|413943303|gb|AFW75952.1| hypothetical protein ZEAMMB73_807339 [Zea mays]
Length = 700
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 129/345 (37%), Positives = 174/345 (50%), Gaps = 62/345 (17%)
Query: 16 IPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHS 75
+P R+P+ +LCRV + +A+ +TDEV A++ L P NEP D + K S
Sbjct: 62 LPAGRVPALVLCRVDAVRFLADPDTDEVLARVRLAPV-RPNEPDHADAAAPGAREDKPAS 120
Query: 76 FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQ 135
F+K LT SD + GGFSV R A P LD + P Q ++AKD+HG W+F+HI+RG
Sbjct: 121 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGT 180
Query: 136 PRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR-------------------- 175
PRRHLLTTGWS FV KRLVAGD+ VF+R NG+L VG+R
Sbjct: 181 PRRHLLTTGWSAFVNQKRLVAGDSIVFMRTGNGDLCVGIRRAKKGGIGGGPEFPHHQPPD 240
Query: 176 ---------------------CLARQQSSM---PSSVISSQSMHLGVLATASHAVATQTM 211
AR + + P V+ + ++ A + Q
Sbjct: 241 GGGYGYGYAGFSTFLRGEEDDAAARGKVRVLVRPEEVVEAANL----------AASGQPF 290
Query: 212 FVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDF 268
VVYY PR S +F + A+ ++ GMR+KM FE EDS F GTV V+
Sbjct: 291 EVVYY-PRASTPEFCVKAGAVRAAMRTQWCAGMRFKMAFETEDSSRISWFMGTVAAVQVA 349
Query: 269 SP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL 312
P W +S WR L+V WDEP + RVSPW +E + S+TP +
Sbjct: 350 DPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVE--LVSSTPAI 392
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 535 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI-KGQLHTRTKWEIVYTDD-EGDMMLV 592
KV MQ VGR LDL+ + Y+ L L +MF + + +L + + Y D G +
Sbjct: 623 KVFMQSEDVGRTLDLSAVASYEELYQRLADMFGVDRAELTS----HVFYRDGASGALKHA 678
Query: 593 GDDPWHEFCNMVKRIFI 609
GD+P+ EF +R+ I
Sbjct: 679 GDEPFSEFTKTARRLTI 695
>gi|356545983|ref|XP_003541412.1| PREDICTED: auxin response factor 18-like [Glycine max]
Length = 647
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 128/330 (38%), Positives = 174/330 (52%), Gaps = 48/330 (14%)
Query: 20 RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKV 79
++P + CRVV + MA+ ETDEVYA++ L+P + + D A++ R K SF+K
Sbjct: 62 KVPPFVPCRVVAVKYMADPETDEVYAKLKLVPLNANDVDYDHDVIGAET-RDKPASFAKT 120
Query: 80 LTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRH 139
LT SD + GGFSV R A P LD + P Q ++AKD+HG W+F+HI+RG PRRH
Sbjct: 121 LTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQNILAKDVHGETWKFRHIYRGTPRRH 180
Query: 140 LLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCL----------------ARQQSS 183
LLTTGWSTFV K+LVAGD+ VFLR ENG+L VG+R A
Sbjct: 181 LLTTGWSTFVNHKKLVAGDSIVFLRAENGDLCVGIRRAKKGIGGGLETSSGWNPAGGNFP 240
Query: 184 MPSSVIS---------------SQSMHLGV------------LATASHAVATQTMFVVYY 216
MP S S S ++ V + A++ A + F V Y
Sbjct: 241 MPYSGFSPFLREDDNRILRNGNSNGLNPSVSMMGKGKVRPEAIIEAANLAANKKPFEVVY 300
Query: 217 KPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HW 272
PR S +F + + A+ ++ G+R+KM FE EDS F GT+ V+ P +W
Sbjct: 301 YPRASTPEFCVKASLVEAAMQTRWYSGIRFKMAFETEDSSRISWFMGTISSVQVADPLNW 360
Query: 273 KDSKWRSLKVQWDEPASITRPDRVSPWEIE 302
+S WR L+V WDEP + RVSPW +E
Sbjct: 361 PNSPWRLLQVTWDEPDLLQNVRRVSPWLVE 390
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 534 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI-KGQLHTRTKWEIVYTDDEGDMMLV 592
KV M+ VGR +DL+ L YD L +L +MF I K ++ +R ++Y D G + +
Sbjct: 564 CKVFMESEDVGRTMDLSLLRSYDELHRKLADMFGIEKSEMLSR----VLYCDSVGAIKHI 619
Query: 593 GDDPWHEFCNMVKRIFI 609
GD+P+ +F KR+ I
Sbjct: 620 GDEPFSDFTRTAKRLTI 636
>gi|350537209|ref|NP_001234796.1| auxin response factor 10 [Solanum lycopersicum]
gi|300676100|gb|ADK26472.1| auxin response factor 10 [Solanum lycopersicum]
Length = 699
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 138/382 (36%), Positives = 187/382 (48%), Gaps = 72/382 (18%)
Query: 18 LFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQ-------------NEPTTPDPC 64
L R P+ ILCRV + +A+ ETDEVYA+I ++P ++ NE T +
Sbjct: 51 LPRSPALILCRVAAVKFLADPETDEVYAKIRVVPVGNKGNDFDDDDDILGSNESGTAE-- 108
Query: 65 PADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGY 124
K +SF+K LT SD + GGFSV R A P LD P Q + AKD+HG
Sbjct: 109 -------KPNSFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVTAKDVHGE 161
Query: 125 EWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSM 184
W+F+HI+RG PRRHLLTTGWS+FV K+LVAGD+ VFLR ENGEL VG+R R
Sbjct: 162 SWKFRHIYRGTPRRHLLTTGWSSFVNQKKLVAGDSIVFLRAENGELCVGIRRAKRGGIGG 221
Query: 185 P----------------SSVISSQSMHLGVLAT------------------ASHAVATQT 210
P S+ + + G L + A+H ++
Sbjct: 222 PEAPSGWNSGAGNYGGFSAFLREEMSKNGNLTSPTRSLRGKGRVRPESVVEAAHLASSGQ 281
Query: 211 MFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVED 267
F V Y PR T +F + + A+ ++ GMR+KM FE EDS F GT+ ++
Sbjct: 282 PFEVVYYPRANTPEFCVRASSVNAAMRIQWCSGMRFKMAFETEDSSRISWFMGTISSIQL 341
Query: 268 FSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLS 326
P W +S WR L+V WDEP + VSPW +E + S P + L+ PR
Sbjct: 342 ADPIRWPNSPWRLLQVAWDEPDLLQNVKHVSPWLVE--LVSNMPVI---HLSPFSPPRKK 396
Query: 327 MEVPP-------LDLPSAASAP 341
+ +PP LPS + P
Sbjct: 397 LRLPPDFSLDSQFQLPSFSGNP 418
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Query: 530 NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI-KGQLHTRTKWEIVYTDDEGD 588
N KV ++ VGR LDL+ + Y+ L L MF + + + TR ++Y D G
Sbjct: 587 NTGHCKVFLESEDVGRTLDLSVMGSYEELYKRLANMFGLERPDMLTR----VLYHDATGA 642
Query: 589 MMLVGDDPWHEFCNMVKR--IFICSSQDVKK 617
+ GD+P+ +F KR I + SS ++K+
Sbjct: 643 VKHTGDEPFSDFVKSAKRLTILMNSSSNIKR 673
>gi|302755594|ref|XP_002961221.1| hypothetical protein SELMODRAFT_437622 [Selaginella moellendorffii]
gi|300172160|gb|EFJ38760.1| hypothetical protein SELMODRAFT_437622 [Selaginella moellendorffii]
Length = 835
Score = 205 bits (521), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 140/394 (35%), Positives = 189/394 (47%), Gaps = 80/394 (20%)
Query: 16 IPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPS----------QNEPTTPDPC 64
IP F R ILCRV+++ +A+ ETDEVYA++ L PE + +E P
Sbjct: 99 IPDFPRSGGTILCRVISVDFLADAETDEVYAKMKLQPEVAPAPLFGTRMGDDEELVSSPT 158
Query: 65 PADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGY 124
+ P SF+K LT SD + GGFSV R A P LD + P Q ++AKD+HG
Sbjct: 159 VVEKP----ASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSIDPPVQTVLAKDVHGE 214
Query: 125 EWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR----- 179
W+F+HI+RG PRRHLLTTGWSTFV K+LVAGD VFLR +GEL VGVR R
Sbjct: 215 IWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDAIVFLRSASGELCVGVRRSMRGPGNG 274
Query: 180 ----------QQSSMPSSV----ISSQSMHLGVLATASHAVATQTM-------------- 211
Q S+P + I S+S + +L+ + +
Sbjct: 275 DSGISWHSSPGQRSLPQNSSRWEIKSESGYSELLSGNGSGTSGASFARNRARVTSKSVLE 334
Query: 212 ----------FVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-F 258
F V Y PR T++F + + ++ + + GMR+KM FE EDS F
Sbjct: 335 AASLAAAGQAFEVVYYPRASTAEFCVRASVVKASLEHSWYPGMRFKMAFETEDSSRISWF 394
Query: 259 SGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVL 317
GT+ V+ P W S WR L+V WDEP + +RVSPW++E LV
Sbjct: 395 MGTISAVQPADPIRWPSSPWRILQVSWDEPDLLQGVNRVSPWQVE---------LVS--- 442
Query: 318 AKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHN 351
L M++PP LP P + +S
Sbjct: 443 ------TLPMQLPPFSLPRKKIRPLDLQFGESQG 470
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 535 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI-KGQLHTRTKWEIVYTDDEGDMMLVG 593
K+ + VGR LDL+ Y+ L D L MF + K +L R +VY D EG + +G
Sbjct: 748 KIFFEKEEVGRTLDLSLFGNYEELYDRLASMFTMDKSKLSGR----VVYRDLEGSTIYIG 803
Query: 594 DDPWHEFCNMVKRIFICS 611
+P+ F V+R+ I +
Sbjct: 804 GEPYGNFVKSVRRLTILA 821
>gi|87240937|gb|ABD32795.1| Transcriptional factor B3; Auxin response factor [Medicago
truncatula]
Length = 648
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 131/360 (36%), Positives = 176/360 (48%), Gaps = 57/360 (15%)
Query: 20 RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPA---DSPRPKVHSF 76
++PS I CRV I MA ETDEVYA++ L+P D + K SF
Sbjct: 72 KIPSFIPCRVEAIRYMANHETDEVYAKLRLVPMNINQVSFDNDGVAGINVSETKDKHQSF 131
Query: 77 SKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQP 136
+K LT SD + GGFS R A P LD + + P Q++ KD+HG +W F+H++RG P
Sbjct: 132 AKTLTQSDANNGGGFSCPRYCAETLFPRLDYSANPPLQDIFPKDVHGEKWHFRHVYRGTP 191
Query: 137 RRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR--------------------- 175
+RHLLTTGWS FV+ K+L +GD+ VFLR ENG+LHVG+R
Sbjct: 192 KRHLLTTGWSPFVSDKKLASGDSIVFLRSENGDLHVGIRRAKRRNNVGVDPLSGWKSGSG 251
Query: 176 ---CLARQQSSMPSS-----------------VISSQSMHLG------VLATASHAVATQ 209
C A PS +IS M G V+ Q
Sbjct: 252 IGICAAPPYGGFPSFSGEEDNKLRRNGKGNGLLISDGMMGRGKVKALEVIEAVRLGTNMQ 311
Query: 210 TMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVE 266
VVYY PR T +F + + A+ ++ GMR+KM E EDS F GTV V+
Sbjct: 312 PFDVVYY-PRSGTPEFFVKTSLIGMALQIRWCPGMRFKMAIETEDSSRISWFIGTVASVQ 370
Query: 267 DFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRL 325
P W DS WR L+V WDEP + RV+PW++E + S P++ + P + K+ RL
Sbjct: 371 AADPSWSDSMWRLLEVTWDEPELLKNVKRVNPWQVE--IVSNMPSIPLSPFIPPRKKLRL 428
>gi|356539348|ref|XP_003538160.1| PREDICTED: auxin response factor 18-like [Glycine max]
Length = 697
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 127/330 (38%), Positives = 171/330 (51%), Gaps = 46/330 (13%)
Query: 19 FRLPSKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRP----KV 73
R+P ILC V + MA+ ETD+V+A+++L+P S+ P + D+ P K
Sbjct: 47 LRVPPFILCNVEAVKFMADPETDQVFAKLSLVPLRNSELGPDSDSAAGDDAAEPSSCEKP 106
Query: 74 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 133
SF+K LT SD + GGFSV R A P LD P Q +VAKD+HG WRF+HI+R
Sbjct: 107 ASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDCTAEPPVQTVVAKDVHGETWRFRHIYR 166
Query: 134 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR------------------ 175
G PRRHLLTTGWS+FV K+LVAGD+ VFLR ENG+L VG+R
Sbjct: 167 GTPRRHLLTTGWSSFVNQKKLVAGDSVVFLRAENGDLCVGIRRAKKGIDEGSGLASSSVW 226
Query: 176 ------------CLARQQSSM---PSSVISSQSMHLGVLA----TASHAVATQTMFVVYY 216
++++ M V + S + V A A A+ F V Y
Sbjct: 227 SSASGSGIGPFSFFLKEENKMLRNGCGVGGNLSGRVKVRAEDVVEAVTLAASNKAFEVVY 286
Query: 217 KPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HW 272
PR S +F + + A+ ++ GMR+KM FE ED+ F GT+ V+ P W
Sbjct: 287 YPRASTPEFCVKASSVGAAMRIQWCSGMRFKMAFETEDATRISWFMGTIASVQVVDPICW 346
Query: 273 KDSKWRSLKVQWDEPASITRPDRVSPWEIE 302
+S WR L+V WDEP + RVSPW +E
Sbjct: 347 PNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 376
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 5/107 (4%)
Query: 514 QVSPKESQSKQSC--LTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQ 571
Q SP ++ S + L + KV ++ VGR LDL+ Y+ L L MF I+
Sbjct: 566 QFSPGKASSAEFFWQLGLDTGHCKVFLESEDVGRTLDLSQFGSYEELYRRLGNMFGIE-- 623
Query: 572 LHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 618
+ ++Y D G + G++P+ +F KR+ I + K +
Sbjct: 624 -RSEILNHVLYYDAAGAVKQTGEEPFSDFMKTAKRLTILTDSGSKNI 669
>gi|6165644|gb|AAF04627.1|AF099735_1 auxin response factor 10 [Arabidopsis thaliana]
Length = 701
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 128/332 (38%), Positives = 165/332 (49%), Gaps = 50/332 (15%)
Query: 20 RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP---------R 70
R+P ILCRVV++ +A+ ETDEV+A+ITLLP P + D +P +
Sbjct: 50 RVPPLILCRVVSVKFLADAETDEVFAKITLLPLPGNDLDLENDAVLGLTPPSSDGNGNGK 109
Query: 71 PKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKH 130
K SF+K LT SD + GGFSV R A P LD + P Q + AKD+HG W+F+H
Sbjct: 110 EKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVNAKDIHGETWKFRH 169
Query: 131 IFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR------QQSSM 184
I+RG PRRHLLTTGWSTFV K+L+AGD+ VFLR E+G+L VG+R R S
Sbjct: 170 IYRGTPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKRGGLGSNAGSDN 229
Query: 185 P------------SSVISSQSMHL-------------------GVLATASHAVATQTMFV 213
P S+ +S+ M + V + F
Sbjct: 230 PYPGFSGFLRDDESTTTTSKLMMMKRNGNNDGNAAATGRVRVEAVAGSGGACSXVDKAFE 289
Query: 214 VYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP 270
V Y PR S +F + A+ + GMR KM FE EDS F GT V+ P
Sbjct: 290 VVYYPRASTPEFCVKAADVRSAMRXXWCXGMRXKMAFETEDSSRISWFMGTXSAVQVADP 349
Query: 271 -HWKDSKWRSLKVQWDEPASITRPDRVSPWEI 301
W +S WR L+V WDEP RVSPW +
Sbjct: 350 IRWPNSPWRLLQVAWDEPDLXQNVKRVSPWLV 381
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 535 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 594
KV M+ VGR LDL+ + L +L EMF I+ + T + Y D G + +GD
Sbjct: 585 KVFMESEDVGRTLDLSVIGSVQELYRKLAEMFHIEERPDLVT--HVGYRDANGVIKRIGD 642
Query: 595 DPWHEFCNMVKRIFI 609
+P+ +F KR+ I
Sbjct: 643 EPFSDFMKATKRLTI 657
>gi|295844290|gb|ADG43142.1| auxin response factor 8 [Zea mays]
Length = 707
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 131/339 (38%), Positives = 176/339 (51%), Gaps = 35/339 (10%)
Query: 20 RLPSKILCRVVNIHLMAEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFS 77
R+P+ + CRV + MA+ +TDEV+A+I L+P + D A + K SF+
Sbjct: 65 RVPALVPCRVTAVRYMADPDTDEVFARIRLVPLRGGEAHAGGLDDDVAAADEQEKPASFA 124
Query: 78 KVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPR 137
K LT SD + GGFSV R A P LD P Q +VAKD+HG W+F+HI+RG PR
Sbjct: 125 KTLTQSDANNGGGFSVPRYCAETIFPRLDYAADPPVQNVVAKDVHGTAWKFRHIYRGTPR 184
Query: 138 RHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISS------ 191
RHLLTTGWSTFV K+L+AGD+ VFLRG++G+LHVG+R R
Sbjct: 185 RHLLTTGWSTFVNQKKLIAGDSIVFLRGDSGDLHVGIRRAKRGFCGAGGGGGDEAPTPGW 244
Query: 192 ---QSMHLGVLATASHAVA------------------TQTMFVVYYKPRTS--QFIISLN 228
+ G ++ + A A Q+ VVYY PR S +F +
Sbjct: 245 HHYAGLIRGNVSPCAAAKARGKVRPEDVAEAARLAAAGQSFEVVYY-PRASTPEFCVRAA 303
Query: 229 KYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDE 286
A+ +++ GMR+KM FE EDS F GTV GV+ P W S WR L+V WDE
Sbjct: 304 AVRAAMRVQWSPGMRFKMAFETEDSSRISWFMGTVAGVQVTDPIRWPQSPWRLLQVTWDE 363
Query: 287 PASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRL 325
P + RVSPW +E V+S + K+PR+
Sbjct: 364 PDLLQNVKRVSPWLVE-LVSSMPAIHLASFSPPRKKPRI 401
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Query: 532 SRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMML 591
+ KV ++ VGR LDL+ L +D L L EMF ++G + ++Y G++
Sbjct: 622 GQCKVFVESDTVGRNLDLSALGSFDELYGRLSEMFGVEG---AEMRSRVLYRGATGEVRH 678
Query: 592 VGDDPWHEFCNMVKRIFICS 611
GD+P+ +F +RI I +
Sbjct: 679 AGDEPFSDFVKSARRITILT 698
>gi|357510693|ref|XP_003625635.1| Auxin response factor [Medicago truncatula]
gi|355500650|gb|AES81853.1| Auxin response factor [Medicago truncatula]
Length = 1252
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 131/360 (36%), Positives = 176/360 (48%), Gaps = 57/360 (15%)
Query: 20 RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPA---DSPRPKVHSF 76
++PS I CRV I MA ETDEVYA++ L+P D + K SF
Sbjct: 72 KIPSFIPCRVEAIRYMANHETDEVYAKLRLVPMNINQVSFDNDGVAGINVSETKDKHQSF 131
Query: 77 SKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQP 136
+K LT SD + GGFS R A P LD + + P Q++ KD+HG +W F+H++RG P
Sbjct: 132 AKTLTQSDANNGGGFSCPRYCAETLFPRLDYSANPPLQDIFPKDVHGEKWHFRHVYRGTP 191
Query: 137 RRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR--------------------- 175
+RHLLTTGWS FV+ K+L +GD+ VFLR ENG+LHVG+R
Sbjct: 192 KRHLLTTGWSPFVSDKKLASGDSIVFLRSENGDLHVGIRRAKRRNNVGVDPLSGWKSGSG 251
Query: 176 ---CLARQQSSMPSS-----------------VISSQSMHLG------VLATASHAVATQ 209
C A PS +IS M G V+ Q
Sbjct: 252 IGICAAPPYGGFPSFSGEEDNKLRRNGKGNGLLISDGMMGRGKVKALEVIEAVRLGTNMQ 311
Query: 210 TMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPE-RRFSGTVVGVE 266
VVYY PR T +F + + A+ ++ GMR+KM E EDS F GTV V+
Sbjct: 312 PFDVVYY-PRSGTPEFFVKTSLIGMALQIRWCPGMRFKMAIETEDSSRISWFIGTVASVQ 370
Query: 267 DFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRL 325
P W DS WR L+V WDEP + RV+PW++E + S P++ + P + K+ RL
Sbjct: 371 AADPSWSDSMWRLLEVTWDEPELLKNVKRVNPWQVE--IVSNMPSIPLSPFIPPRKKLRL 428
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 112/305 (36%), Positives = 150/305 (49%), Gaps = 38/305 (12%)
Query: 20 RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPA---DSPRPKVHSF 76
++PS I CRV +I MA ETDEVYA++ L+P D + K SF
Sbjct: 850 KIPSFIPCRVEDIRYMANHETDEVYAKLRLVPMNINQVSFDNDGVAGINVSETKDKHQSF 909
Query: 77 SKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQP 136
+K LT SD + GGFS R A P +D + + P Q + KD+HG +W F+H++RG P
Sbjct: 910 AKTLTQSDANNGGGFSCPRYCAEMIFPRMDYSGNPPFQGIYPKDVHGEKWHFRHVYRGTP 969
Query: 137 RRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR--------CLA---------- 178
+RHLLTTGWS FV+ K+L +GD+ VFLR ENGEL VG+ C A
Sbjct: 970 KRHLLTTGWSPFVSDKKLASGDSVVFLRSENGELRVGIWREKSGIGICPAPPYGGFTSFS 1029
Query: 179 -------RQQSSMPSSVISSQSMHLG------VLATASHAVATQTMFVVYYKPR--TSQF 223
R+ +IS M G V+ Q VVYY PR T +F
Sbjct: 1030 EEEDNKLRRNGKGNGLLISDGMMGRGKVKVLEVIEAVRLGTNMQPFDVVYY-PRSGTPEF 1088
Query: 224 IISLNKYLEAVNNKFAVGMRYKMRFEGEDSPE-RRFSGTVVGVEDFSPHWKDSKWRSLKV 282
+ + + ++ GMR+KM E EDS F GTV V+ P W DS WR L+
Sbjct: 1089 FVKTSLIGITLQIRWCPGMRFKMPIETEDSSRISWFIGTVASVQAADPSWPDSLWRLLQP 1148
Query: 283 QWDEP 287
+ +P
Sbjct: 1149 SFQQP 1153
>gi|356542623|ref|XP_003539766.1| PREDICTED: auxin response factor 18-like [Glycine max]
Length = 701
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 129/336 (38%), Positives = 166/336 (49%), Gaps = 52/336 (15%)
Query: 19 FRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPAD-----SPRPKV 73
RLP ILC V + MA ETDEV+A+++LLP + D D S K
Sbjct: 47 LRLPPFILCNVEAVKFMANPETDEVFAKLSLLPLRNSELGADSDGAGGDDVAEPSCCEKP 106
Query: 74 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 133
SF+K LT SD + GGFSV R A P LD P Q +VAKD+HG WRF+HI+R
Sbjct: 107 ASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVVAKDVHGETWRFRHIYR 166
Query: 134 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR------------------ 175
G PRRHLLTTGWS+FV K+LVAGD+ VFLR ENG+L VG+R
Sbjct: 167 GTPRRHLLTTGWSSFVNQKKLVAGDSVVFLRAENGDLCVGIRRAKKGISEGSGSGSSSVW 226
Query: 176 ----------C-----------LARQQSSMPSSVISSQSMHLGVLA----TASHAVATQT 210
C L + + + + S + V A A A+
Sbjct: 227 SSASGSGNGNCGIGPYGPFSFFLKEENKMLRNGCGGNLSGRVKVRAEDVVEAVTLAASNK 286
Query: 211 MFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVED 267
F V Y PR S +F + + A+ ++ GMR+KM FE ED+ F GT+ V+
Sbjct: 287 PFEVVYYPRASTPEFCVKASAVRAAMRIQWCSGMRFKMAFETEDASRISWFMGTIASVQV 346
Query: 268 FSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 302
P W +S WR L+V WDEP + RVSPW +E
Sbjct: 347 VDPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 382
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 61/130 (46%), Gaps = 11/130 (8%)
Query: 495 SDGKSDIAKEFKEKKQEQV--QVSPKESQSKQSC--LTSNRSRTKVQMQGVAVGRALDLT 550
SD K D AK + Q + Q SP ++ S + L + KV ++ VGR LDL+
Sbjct: 550 SDDK-DKAKCLMDDSQSTLSQQFSPGKASSAEFSWQLGLDTGHCKVFLESEDVGRTLDLS 608
Query: 551 TLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFIC 610
Y+ L L MF I+ + ++Y D G G++P+ +F KR+ I
Sbjct: 609 LFGSYEDLYRRLAIMFGIE---RSEILNHVLYHDAAGAAKKTGEEPFSDFMKTAKRLTIL 665
Query: 611 ---SSQDVKK 617
SS+++K+
Sbjct: 666 TDSSSKNIKR 675
>gi|357123494|ref|XP_003563445.1| PREDICTED: auxin response factor 18-like [Brachypodium distachyon]
Length = 706
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 133/368 (36%), Positives = 183/368 (49%), Gaps = 60/368 (16%)
Query: 21 LPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRP--------- 71
+P+ +LCRV +H MA+ +TDEV+A+I L+P +P
Sbjct: 72 IPALVLCRVAGVHFMADPDTDEVFAKIRLVPARPHEQPGGDAADDGGGINGAAAGHAEAE 131
Query: 72 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 131
K SF+K LT SD + GGFSV R A P LD + P Q ++AKD+HG W+F+HI
Sbjct: 132 KPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHI 191
Query: 132 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR---------------- 175
+RG PRRHLLTTGWS+FV K+LVAGD+ VF+R ENG+L VG+R
Sbjct: 192 YRGTPRRHLLTTGWSSFVNQKKLVAGDSIVFMRTENGDLCVGIRRAKKGGIGGPELLPPP 251
Query: 176 ------------CLARQQSSMPSSVISSQSMHLGV---------LATASHAVATQTMFVV 214
R + + ++++ + G +A A++ A+ F V
Sbjct: 252 PPPPGTNYGGFSMFLRGEEDGSNKMMAAAAAARGKARVRVRPEEVAEAANLAASGQPFDV 311
Query: 215 YYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP- 270
Y PR S +F + A+ ++ GMR+KM FE EDS F GTV V+ P
Sbjct: 312 VYYPRASTPEFCVKAGAVRAAMRTQWCPGMRFKMAFETEDSSRISWFMGTVSAVQVSDPI 371
Query: 271 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVP 330
W +S WR L+V WDEP + RVSPW +E + S P + LA PR + VP
Sbjct: 372 RWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE--LVSNMPAI---HLAPFSPPRKKLCVP 426
Query: 331 -----PLD 333
PLD
Sbjct: 427 FYPELPLD 434
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 534 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVG 593
K+ MQ VGR LDL + YD L L +MF I+ R ++ Y D G + G
Sbjct: 627 CKIFMQSEDVGRTLDLAAVGSYDELYRRLADMFGIEKAELMR---QVFYRDAAGALKHTG 683
Query: 594 DDPWHEFCNMVKRIFICSS 612
D+P+ +F +R+ I +
Sbjct: 684 DEPFSDFTKTARRLTILTG 702
>gi|337273025|gb|AEI70250.1| auxin response factor 10 [Solanum lycopersicum]
Length = 699
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 137/373 (36%), Positives = 185/373 (49%), Gaps = 54/373 (14%)
Query: 18 LFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRP----KV 73
L R P+ ILCRV + +A+ ETDEVYA+I ++P ++ D S K
Sbjct: 51 LPRSPALILCRVAAVKFLADPETDEVYAKIRVVPVGNKGNDFDDDDDILGSNESGTAEKP 110
Query: 74 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 133
+SF+K LT SD + GGFSV R A P LD P Q + AKD+HG W+F+HI+R
Sbjct: 111 NSFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVTAKDVHGETWKFRHIYR 170
Query: 134 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR------------------ 175
G PRRHLLTTGWS+FV K+LVAGD+ VFLR ENGEL VG+R
Sbjct: 171 GTPRRHLLTTGWSSFVNQKKLVAGDSIVFLRAENGELCVGIRRAKRGGIGGPEAPSGWNS 230
Query: 176 ---------CLARQQSSMPSSVISSQSMHLG--------VLATASHAVATQTMFVVYY-K 217
R++ S ++ S G V+ A A + Q VVYY +
Sbjct: 231 GAGNYGGFSAFLREEMSKNGNLTSPTRSLRGKGRVRPESVVEAAYLASSGQPFEVVYYPR 290
Query: 218 PRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDS 275
T +F + + A+ ++ GMR+KM FE EDS F GT+ ++ P W +S
Sbjct: 291 ANTPEFCVRASSVNAAMRIQWCSGMRFKMAFETEDSSRISWFMGTISSIQLADPIRWPNS 350
Query: 276 KWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPP---- 331
WR L+V WDEP + VSPW +E + S P + L+ PR + +PP
Sbjct: 351 PWRLLQVAWDEPDLLQNVKHVSPWLVE--LVSNMPVI---HLSPFSPPRKKLRLPPDFSL 405
Query: 332 ---LDLPSAASAP 341
LPS + P
Sbjct: 406 DSQFQLPSFSGNP 418
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Query: 530 NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI-KGQLHTRTKWEIVYTDDEGD 588
N KV ++ VGR LDL+ + Y+ L L MF + + + TR ++Y D G
Sbjct: 587 NTGHCKVFLESEDVGRTLDLSVMGSYEELYKRLANMFGLERPDMLTR----VLYHDATGA 642
Query: 589 MMLVGDDPWHEFCNMVKR--IFICSSQDVKK 617
+ GD+P+ +F KR I + SS ++K+
Sbjct: 643 VKHTGDEPFSDFVKSAKRLTILMNSSSNIKR 673
>gi|357443233|ref|XP_003591894.1| Auxin response factor [Medicago truncatula]
gi|355480942|gb|AES62145.1| Auxin response factor [Medicago truncatula]
Length = 619
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 134/350 (38%), Positives = 179/350 (51%), Gaps = 48/350 (13%)
Query: 20 RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADS----PRPKVHS 75
R+P I CR+ + MA+ ETDEVY ++ L P +NE + C + + K S
Sbjct: 59 RVPPLIPCRISAMKYMADPETDEVYVKMKLTPL-RENELDFEEDCFFGNNGLESQEKPAS 117
Query: 76 FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQ 135
F+K LT SD + GGFSV R A P LD + P Q ++AKD+HG W+F+HI+RG
Sbjct: 118 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMHGQCWKFRHIYRGT 177
Query: 136 PRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR-------QQSSMPSSV 188
PRRHLLTTGWS FV K+LVAGD+ VFLR ENG+L VG+R + Q S SS
Sbjct: 178 PRRHLLTTGWSNFVNHKKLVAGDSIVFLRAENGDLCVGIRRAKKGGIGGGTDQFSNSSST 237
Query: 189 ISSQSMHLG----------------------------VLATASHAVATQTMFVVYYKPRT 220
+ S G V+ + AV ++ VVYY PR
Sbjct: 238 WNRVSPLFGGVGSGFLCGNDNRKNGCDDLMGKVGAESVVEAVNCAVNGRSFEVVYY-PRA 296
Query: 221 S--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSK 276
S +F + ++ A+ ++ GMR+KM FE EDS F GT+ V P W DS
Sbjct: 297 STPEFCVKVSSVKSAMQIQWCSGMRFKMPFETEDSSRISWFMGTISSVHVQDPIRWPDSP 356
Query: 277 WRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRL 325
WR L+V WDEP + V+PW +E + S PN + P K+PR
Sbjct: 357 WRLLQVVWDEPDLLQNVKCVNPWLVE--LVSNMPNFNLSPFTPPRKKPRF 404
>gi|242062386|ref|XP_002452482.1| hypothetical protein SORBIDRAFT_04g026610 [Sorghum bicolor]
gi|241932313|gb|EES05458.1| hypothetical protein SORBIDRAFT_04g026610 [Sorghum bicolor]
Length = 708
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 131/337 (38%), Positives = 177/337 (52%), Gaps = 33/337 (9%)
Query: 20 RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKV 79
R+P+ + CRV + MA+ +TDEV+A+I L+P A + K SF+K
Sbjct: 65 RVPALVPCRVAAVRYMADPDTDEVFARIRLVPLRGGEADAGGLEDDAADEQEKPASFAKT 124
Query: 80 LTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRH 139
LT SD + GGFSV R A P LD P Q +VAKD+HG W+F+HI+RG PRRH
Sbjct: 125 LTQSDANNGGGFSVPRYCAETIFPRLDYAADPPVQTVVAKDVHGAAWKFRHIYRGTPRRH 184
Query: 140 LLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR------C----------------- 176
LLTTGWSTFV K+LVAGD+ VFLRG++G+LHVG+R C
Sbjct: 185 LLTTGWSTFVNQKKLVAGDSIVFLRGDSGDLHVGIRRAKRGFCGAGGGGGEEAPSPGWDH 244
Query: 177 ---LARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYL 231
L R S ++ + + +A A+ A F Y PR S +F +
Sbjct: 245 YAGLMRGNVSPCAAAKARGKVRPEDVAEAARLAAAGQSFEAVYYPRASTPEFCVRAAAVR 304
Query: 232 EAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPAS 289
A+ +++ GMR+KM FE EDS F GTV GV+ P W S WR L+V WDEP
Sbjct: 305 AAMRVQWSPGMRFKMAFETEDSSRISWFMGTVAGVQVTDPIRWPQSPWRLLQVTWDEPDL 364
Query: 290 ITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRL 325
+ RVSPW +E + S+ P + + K+PR+
Sbjct: 365 LQNVKRVSPWLVE--LVSSMPAIHLASFSPPRKKPRI 399
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 515 VSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG-QLH 573
V SQ + S L + KV ++ VGR LDL+ L +D L L EMF I+G +L
Sbjct: 606 VGDGGSQQQVSELGLEPGQCKVFVESDTVGRNLDLSALSSFDELYRRLSEMFGIEGAELR 665
Query: 574 TRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 609
+R ++Y G++ GD+P+ +F +R+ I
Sbjct: 666 SR----VLYRCATGEVKHAGDEPFSDFVRSARRLTI 697
>gi|297798970|ref|XP_002867369.1| hypothetical protein ARALYDRAFT_913475 [Arabidopsis lyrata subsp.
lyrata]
gi|297313205|gb|EFH43628.1| hypothetical protein ARALYDRAFT_913475 [Arabidopsis lyrata subsp.
lyrata]
Length = 670
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 136/349 (38%), Positives = 181/349 (51%), Gaps = 49/349 (14%)
Query: 25 ILCRVVNIHLMAEQETDEVYAQITLLP----EPSQNE-PTTPDPCPADSPRPKVHSFSKV 79
+LCRV+ I MA+ E+DEVYA++ L+P E +E D +S K SF+K
Sbjct: 64 VLCRVLAIKYMADAESDEVYAKLRLIPLKDDEYVDHEYGDGEDSNGFESNSEKTPSFAKT 123
Query: 80 LTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRH 139
LT SD + GGFSV R A P LD N P Q ++AKD+HG W+F+HI+RG PRRH
Sbjct: 124 LTQSDANNGGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFRHIYRGTPRRH 183
Query: 140 LLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR----------------QQSS 183
LLTTGWS FV K+LVAGD+ VF+R ENG+L VG+R R S
Sbjct: 184 LLTTGWSNFVNQKKLVAGDSIVFMRAENGDLCVGIRRAKRGGIGNGPEYSAGWNPIGGSC 243
Query: 184 MPSSVI---SSQSMHL---------------GVLATASHAVATQTMFVVYY-KPRTSQFI 224
SS++ S S+ V+ A+ A++ + VVYY + TS+F
Sbjct: 244 GYSSLLREDESNSLRRSNCSLADRKGKVTAESVIEAATLAISGRPFEVVYYPRASTSEFC 303
Query: 225 ISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKV 282
+ A+ + GMR+KM FE EDS F GTV V P W +S WR L+V
Sbjct: 304 VKAVDARAAMRIPWCSGMRFKMAFETEDSSRISWFMGTVSAVNVSDPIRWPNSPWRLLQV 363
Query: 283 QWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPRLSMEVP 330
WDEP + RV+PW +E V++ V P+ L PR M +P
Sbjct: 364 AWDEPDLLQNVKRVNPWLVE-LVSN-----VHPIPLTSFSPPRKKMRLP 406
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 535 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 594
KV M+ VGR LDL+ L Y+ L +L +MF IK + ++Y D G + G+
Sbjct: 588 KVFMESDDVGRTLDLSVLGSYEELSRKLSDMFGIK---KSEMLSSVLYRDASGAIKYAGN 644
Query: 595 DPWHEFCNMVKRIFICSSQ 613
+P+ EF +R+ I + Q
Sbjct: 645 EPFSEFLKTARRLTILTEQ 663
>gi|147834267|emb|CAN63853.1| hypothetical protein VITISV_024151 [Vitis vinifera]
Length = 680
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 190/676 (28%), Positives = 271/676 (40%), Gaps = 145/676 (21%)
Query: 20 RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPA----DSPRPKVHS 75
R+P +LCRV + +A+ E+DEVYA+I L+P + T D ++P K S
Sbjct: 51 RIPPLVLCRVSAVKYLADPESDEVYAKIRLIPLRNTEGETEDDVLMGGNGIEAPE-KPAS 109
Query: 76 FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQ 135
F+K LT SD + GGFSV R A P LD + P Q ++AKD+HG WRF+HI+RG
Sbjct: 110 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWRFRHIYRGT 169
Query: 136 PRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR------CLARQQSSMPSSVI 189
PRRHLLTTGWS FV K LVAGD+ VFLR ENG+L VG+R C S +
Sbjct: 170 PRRHLLTTGWSNFVNKKNLVAGDSIVFLRAENGDLCVGIRRAKRAGCGPESPSGWNPASG 229
Query: 190 SSQSMHLGV------------------------------LATASHAVATQTMFVVYYKPR 219
+ S + G +A A+ A FV+ Y PR
Sbjct: 230 NGTSPYRGYSGFLREDENRPILTHSNAGFRGKGRVRAESVAEAATLAANGQPFVIVYYPR 289
Query: 220 TS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDS 275
S +F + + A+ ++ GM++KM FE +DS F G + V P W +S
Sbjct: 290 ASTPEFCVKASSVRAAMQIQWCPGMKFKMAFETDDSSRISWFMGNISSVHVNDPIRWPNS 349
Query: 276 KWR-----------------------SLKVQWDEPASITRPDRVSPWEIEPFVASATPNL 312
WR L+V WDEP + RV+PW +E + S P++
Sbjct: 350 PWRLLQVLEYEIQKIVSSHLNTLCKLILQVTWDEPDLLQNVKRVNPWLVE--LVSHVPSI 407
Query: 313 -VQPVLAKNKRPRLSM--------EVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKR 363
+ P K+ RL ++P S A P S S N+ A
Sbjct: 408 HLSPFSPPRKKLRLQQQSEFPLVGQIPMPSFSSNALRPSSPLCCISDNIPAGIQGAR--- 464
Query: 364 IDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHS 423
H + SD N K LF + + +A P+
Sbjct: 465 ---HAQFGLSSSDLHFN-------------------KLQLGLFPLGLQQQLDQTAPPSSI 502
Query: 424 GHSTPHPSKPNNDTLLEQVETGRKTETGTSCR--------LFG--IELINHATSSAPSEK 473
+ NN+ + + G T+ LFG I + + S +
Sbjct: 503 LSGNTMSNHENNENISCLLTIGNSTQNSKKNNEIKAPYFFLFGQPILIEQQVSQSCSGDT 562
Query: 474 VPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQV-QVSPKESQSKQSCLTSNR- 531
+SS SDG + F + Q P+ES S + LT +
Sbjct: 563 AGISS----------------SDGNPEKTPNFSDGSGSAFHQNGPQESSSDEGLLTWYKD 606
Query: 532 ----------SRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIV 581
KV M+ VGR LDL+ L Y+ L +L MF I+ ++
Sbjct: 607 HQKTNLGLETGHCKVFMESEDVGRTLDLSILGSYEELYRKLANMFGIE---RAEMLSNVL 663
Query: 582 YTDDEGDMMLVGDDPW 597
Y D+ G + +GD P+
Sbjct: 664 YRDEAGIVKHIGDAPF 679
>gi|449464378|ref|XP_004149906.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
gi|449490399|ref|XP_004158594.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
Length = 703
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 196/673 (29%), Positives = 288/673 (42%), Gaps = 131/673 (19%)
Query: 20 RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQ-------------NEPTTPDPCPA 66
R+PS I CRV I MA+ ETDEV+A+I L P + NE + D
Sbjct: 58 RIPSIIPCRVSGIRHMADPETDEVFAKIKLSPLANNEFNLDNEDDLLIHNELKSQD---- 113
Query: 67 DSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEW 126
K SF+K LT SD + GGFSV R A P LD + P Q ++AKD+HG W
Sbjct: 114 -----KPTSFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSVEPPVQTILAKDVHGEIW 168
Query: 127 RFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ------ 180
+F+HI+RG PRRHLLTTGWS+FV K+LVAGD+ VFLR E G+L +GVR R
Sbjct: 169 KFRHIYRGTPRRHLLTTGWSSFVNQKKLVAGDSIVFLRAETGDLCIGVRRAKRGIGCGID 228
Query: 181 -------QSSMPSSVISSQSM-----HLG----------------VLATASHAVATQTMF 212
+S S V S M LG V+ A A + Q+
Sbjct: 229 YSPGWNPTNSGSSLVGYSDYMRESEGRLGRRNSNGNLSGRVKVESVIEAAMLAASGQSFE 288
Query: 213 VVYYK-PRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP 270
+VYY T +F++ + A+ + MR+KM FE EDS F GTV ++ P
Sbjct: 289 IVYYPCAGTPEFVVKASSLRSAMQIHWYSAMRFKMPFETEDSSRISWFMGTVSSIQAADP 348
Query: 271 -HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRLSME 328
W DS WR L+V WDEP + V+PW +E V P + V P K+PR ++
Sbjct: 349 IRWPDSPWRMLQVTWDEPDLLQNVKSVNPWLVE--VVVNMPAIHVSPFSPPRKKPRFPLQ 406
Query: 329 VPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQ 388
+S + + N Q +TA A +H+ F
Sbjct: 407 ADSSGFGHLPMPSFSTNIFDTTNPLQ-GITANKIPAGIQGA---RHTQFG---------- 452
Query: 389 SDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKT 448
L+SP ++ S+ L + S H +TP P D G K
Sbjct: 453 -----LSSPNLQISKLLPGQ-------FSPGLKHLDDATPLPGIRGEDIF-----AGMKN 495
Query: 449 ETGTSCRLFGIELINH------ATSSAPSEKVPVSSLTTEGHII-----------STISA 491
+C L+ + + NH ++ + E S T HII ++ S
Sbjct: 496 P--DNCSLW-LPMRNHIQSSKESSKESSKESSKESKETKPAHIILFGQLIFPNQQNSNSC 552
Query: 492 AADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQ------SCLTSNRSRTKVQMQGVA--- 542
+ D+ SD +E + +S +++ S + S L + + ++ + + V
Sbjct: 553 SGDTMNASDANQEKASNLSDGSGLSSQQNGSLENSSEGGSTLYNGQDKSGLSLDTVYCKV 612
Query: 543 ------VGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDP 596
VG LDL++L Y+ L +L M + + ++Y D G VG++P
Sbjct: 613 FVELENVGCNLDLSSLRSYEELYRKLGNMVGLGSSEMLNS---VLYQDTLGATKHVGEEP 669
Query: 597 WHEFCNMVKRIFI 609
+ EF +++ I
Sbjct: 670 FSEFLKKAQKLTI 682
>gi|147819710|emb|CAN74121.1| hypothetical protein VITISV_034897 [Vitis vinifera]
Length = 188
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 97/134 (72%), Positives = 111/134 (82%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
MEQLEAS +Q L+Q++P F LPSKILC+VVN+HL AE ETDEVYAQ+TLLPEP Q+E T+
Sbjct: 49 MEQLEASMHQGLDQKMPSFNLPSKILCKVVNVHLRAEPETDEVYAQVTLLPEPDQSEITS 108
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
PDP + VHSF K LTASDTSTHGGFSVLR+HA ECLPPLDM+Q+ P QELVAKD
Sbjct: 109 PDPPLPEPQSCTVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQNPPWQELVAKD 168
Query: 121 LHGYEWRFKHIFRG 134
LHG EW F+HIFRG
Sbjct: 169 LHGNEWHFRHIFRG 182
>gi|224140191|ref|XP_002323468.1| predicted protein [Populus trichocarpa]
gi|222868098|gb|EEF05229.1| predicted protein [Populus trichocarpa]
Length = 700
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 129/333 (38%), Positives = 160/333 (48%), Gaps = 53/333 (15%)
Query: 23 SKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVH------SF 76
S LCRV I MA+ ETDEV+A+I L+P S + + H SF
Sbjct: 65 SHTLCRVSAIKFMADPETDEVFAKIRLVPINSNEIDLDDQEVAVNGEKEAAHDNKKPVSF 124
Query: 77 SKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQP 136
+K LT SD + GGFSV R A P LD P Q L+AKD+HG W+F+HI+RG P
Sbjct: 125 AKTLTQSDANNGGGFSVPRYCAEMIFPRLDYTADPPVQTLLAKDVHGETWKFRHIYRGTP 184
Query: 137 RRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSV-------- 188
RRHLLTTGWS FV K+LVAGD+ VFLR ENG+L VGVR R S P S+
Sbjct: 185 RRHLLTTGWSPFVNHKKLVAGDSVVFLRAENGDLCVGVRRAKRAISGGPESLWNPALGNL 244
Query: 189 ---------ISSQSMHLGV--------------------------LATASHAVATQTMFV 213
S + H V + A+ A F
Sbjct: 245 VVPYGGFGAFSREDEHKMVKNGRGNGNGSKSNESLMGRGKVRAESVIQAAVLAANGLPFE 304
Query: 214 VYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP 270
Y PR T +F + + + ++ GMR+KM FE EDS F GTV V+D P
Sbjct: 305 TVYYPRANTPEFFVKASLVKTVMQIRWCSGMRFKMAFETEDSSRISWFMGTVCSVQDADP 364
Query: 271 -HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 302
W S WR L+V WDEP + RVSPW +E
Sbjct: 365 LCWPGSPWRLLQVTWDEPDLLQNVKRVSPWLVE 397
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 534 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVG 593
KV ++ VGR LDL L Y+ L +L +MF ++ ++ ++Y DD G +G
Sbjct: 622 CKVFLESEDVGRTLDLQLLESYEELYRKLADMFGLR---NSEKFSNLLYRDDNGITKHIG 678
Query: 594 DDPWHEFCNMVKRIFICS 611
++P+ F +R+ I +
Sbjct: 679 EEPFSNFSKTARRLTIVT 696
>gi|134103847|gb|ABO60876.1| auxin response factor 3 [Gossypium hirsutum]
Length = 647
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 134/360 (37%), Positives = 177/360 (49%), Gaps = 44/360 (12%)
Query: 21 LPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVH---SFS 77
+P+ +LCRV ++ +A+ ETDEVYA+I L+P P+ EP + V SF+
Sbjct: 54 IPALLLCRVASVKFLADAETDEVYAKIMLVPLPN-TEPDLENDAVFGGGSDNVEKPASFA 112
Query: 78 KVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPR 137
K LT SD + GGFSV R A P LD P Q ++A+D+HG W+F+HI+RG PR
Sbjct: 113 KTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVIARDVHGEIWKFRHIYRGTPR 172
Query: 138 RHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSV------ISS 191
RHLLTTGWS+FV K+LVAGD+ VFLR ENGEL VG+R R + S +S
Sbjct: 173 RHLLTTGWSSFVNHKKLVAGDSIVFLRAENGELCVGIRRAKRGNDTGAESGLGNGNDVSP 232
Query: 192 QSMHLGVLATASHAVA-------------------------TQTMFVVYYKPRTS--QFI 224
G L + Q +VYY PR S +F
Sbjct: 233 YGGFSGFLKEDESKITRKRSPRGKGKVRAEAVVEAVALAANGQPFEIVYY-PRASTPEFC 291
Query: 225 ISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKV 282
+ + A+ + MR+KM FE ED F GTV V P W +S WR L+V
Sbjct: 292 VKASAVRAAMRVPWCSLMRFKMAFETEDCSRISWFMGTVSSVHIADPLRWPNSPWRLLQV 351
Query: 283 QWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPP-LDLPSAASAP 341
WDEP + +RVSPW +E V + P + P PR + +P LD P P
Sbjct: 352 TWDEPDLLQNVERVSPWLVE-LVPNMLPVHLSPF--STVTPRKKLRLPKHLDFPLVEQFP 408
>gi|356543474|ref|XP_003540185.1| PREDICTED: auxin response factor 18-like [Glycine max]
Length = 700
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 141/388 (36%), Positives = 195/388 (50%), Gaps = 71/388 (18%)
Query: 15 RIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKV 73
RIP+ P ILC V + +A+ ETDEV+A++ ++P S+ + D A+ K
Sbjct: 51 RIPI---PPLILCCVAAVKFLADPETDEVFARLRMVPLRNSELDYEDSDGNGAEGSE-KP 106
Query: 74 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 133
SF+K LT SD + GGFSV R A P LD + P Q ++AKD+HG W+F+HI+R
Sbjct: 107 ASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVIAKDVHGEVWKFRHIYR 166
Query: 134 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR------------------ 175
G PRRHLLTTGWS+FV K+LVAGD+ VFLR ENG+L VG+R
Sbjct: 167 GTPRRHLLTTGWSSFVNQKKLVAGDSIVFLRAENGDLCVGIRRAKRGGVGGAEGPCGWSS 226
Query: 176 ------------------------CLARQQSSMPSS---VISSQSMHLGVLATASHAVAT 208
R++S + S +S +S+ V AS+
Sbjct: 227 SGGGLGPGPGLGLGPGPGPYGAFSGFLREESKVVRSGRPKVSGESVREAVTLAASN---- 282
Query: 209 QTMFVVYY-KPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVE 266
Q VVYY + T +F I + A+ +++ GMR+KM FE EDS F GT+ V+
Sbjct: 283 QPFEVVYYPRANTPEFCIRTSAVRGAMRIQWSSGMRFKMPFETEDSSRISWFMGTIASVQ 342
Query: 267 DFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRL 325
P W +S WR L+V WDEP + RVSPW +E + S P + LA PR
Sbjct: 343 LLDPIRWPNSPWRLLQVTWDEPDLLHNVKRVSPWLVE--LVSNVPII---HLAPFSPPRK 397
Query: 326 SMEVP-----PLD----LPSAASAPWSA 344
+ P PLD +PS + P+ +
Sbjct: 398 KLRFPQHPEFPLDFQFPIPSFSGNPFGS 425
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 527 LTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDE 586
+ S+ S KV ++ VGR LDL+ L Y+ L L MF I+ + ++Y D
Sbjct: 583 VGSDTSHCKVFIESEDVGRTLDLSCLGSYEELYMRLANMFGIE---RSEMLSHVLYRDAA 639
Query: 587 GDMMLVGDDPWHEFCNMVKRIFICSSQDVK 616
G + G++P+ EF KR+ I + + K
Sbjct: 640 GALKQTGEEPFSEFMKTAKRLTILTDSNNK 669
>gi|283806528|tpg|DAA06632.1| TPA_exp: auxin response factor [Physcomitrella patens]
Length = 714
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 150/430 (34%), Positives = 202/430 (46%), Gaps = 76/430 (17%)
Query: 25 ILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASD 84
+ CRVV+++ +A+ ETDEV+A+I L PE + D A P K SF+K LT SD
Sbjct: 85 VPCRVVSVNFLADTETDEVFARICLQPEIGSSAQDLTDDSLASPPLEKPASFAKTLTQSD 144
Query: 85 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 144
+ GGFS+ R A PPLD P Q ++AKD+HG W+F+HI+RG PRRHLLTTG
Sbjct: 145 ANNGGGFSIPRYCAETIFPPLDYCIDPPVQTVLAKDVHGEVWKFRHIYRGTPRRHLLTTG 204
Query: 145 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSS----------MPSSVI----- 189
WSTFV K+LVAGD VFLR +GEL VGVR R S+ +S I
Sbjct: 205 WSTFVNQKKLVAGDAIVFLRIASGELCVGVRRSMRGVSNGESSSWHSSISNASTIRPSRW 264
Query: 190 -----SSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFI-----ISLNKYLEAV----- 234
S S LG + +A+ + P TS F ++ LEA
Sbjct: 265 EVKGTESFSDFLGGVGDNGYALNSSIRSENQGSPTTSSFARDRARVTAKSVLEAAALAVS 324
Query: 235 NNKFAV----------------------------GMRYKMRFEGEDSPERR-FSGTVVGV 265
+F V GMR+KM FE EDS F GT+ V
Sbjct: 325 GERFEVVYYPRASTAEFCVKAGLVKRALEQSWYAGMRFKMAFETEDSSRISWFMGTIAAV 384
Query: 266 EDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 324
+ P W S WR L+V WDEP + +RVSPW++E + + P + PV K+ R
Sbjct: 385 QAADPVLWPSSPWRVLQVTWDEPDLLQGVNRVSPWQLE--LVATLPMQLPPVSLPKKKLR 442
Query: 325 ------LSMEVPP-LDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDF 377
L ++ P L LP A ++ + LA SV +D + A H + +
Sbjct: 443 TVQPQELPLQPPGLLSLPLAGTSNFGGHLATPWG---SSVLLDDASVGMQGARHDQFNGL 499
Query: 378 SS----NSNF 383
+ NSN+
Sbjct: 500 PTVDFRNSNY 509
>gi|414871039|tpg|DAA49596.1| TPA: hypothetical protein ZEAMMB73_456369 [Zea mays]
Length = 370
Score = 199 bits (505), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 124/304 (40%), Positives = 162/304 (53%), Gaps = 41/304 (13%)
Query: 21 LPSKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQNEPTTPDPC---PADSPRPKVHSF 76
LPS +LC V + +A+ ETDEV+A+I L+P P + E PD PAD+ R K+ SF
Sbjct: 57 LPSLVLCSVTGVRFLADPETDEVFAKIRLVPVAPGEVEFREPDEFSVDPADA-REKLSSF 115
Query: 77 SKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQP 136
+K LT SD + GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG P
Sbjct: 116 AKTLTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIYRGTP 175
Query: 137 RRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHL 196
RRHLLTTGWSTFV K+LVAGD+ VFLR E+GEL VG+R + R + +
Sbjct: 176 RRHLLTTGWSTFVNQKKLVAGDSIVFLRTEHGELCVGIRRVKRVSCGGMECMSGWNAPGY 235
Query: 197 GVLA-------------------------------TASHAVATQTMFVVYYKPRTS--QF 223
G L+ AS A + Q VVYY PR S +F
Sbjct: 236 GALSAFLKDEEGKMMKSHGGYMRGRGKVKITDVVNAASLAASGQPFEVVYY-PRASTPEF 294
Query: 224 IISLNKYLEAVNNKFAVGMRYKMRFEGEDSPE-RRFSGTVVGVEDFSP-HWKDSKWRSLK 281
++ A+ N++ GMR+KM FE EDS F GT+ + P W +S WR L+
Sbjct: 295 VVKAASVQNAMRNQWCPGMRFKMAFETEDSSRISWFMGTIASAQVADPIRWPNSPWRLLQ 354
Query: 282 VQWD 285
V D
Sbjct: 355 VLLD 358
>gi|255586869|ref|XP_002534044.1| Auxin response factor, putative [Ricinus communis]
gi|223525942|gb|EEF28340.1| Auxin response factor, putative [Ricinus communis]
Length = 590
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 130/346 (37%), Positives = 177/346 (51%), Gaps = 42/346 (12%)
Query: 20 RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE--PTTPDPCP-----ADSPRPK 72
++ + I C+V I +A+ ETDEVYA+I L+P ++ + D C + K
Sbjct: 65 QISAMIPCKVSAIKYLADPETDEVYAKIRLIPLIDRDVFLENSGDDCDDGLYNGAESQEK 124
Query: 73 VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIF 132
SF+K LT SD + GGFSV R A P LD + P Q ++AKD+HG W+F+HI+
Sbjct: 125 PASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTILAKDVHGETWKFRHIY 184
Query: 133 RGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR---QQSSMPSSVI 189
RG PRRHLLTTGWS FV K+LVAGD+ VFLR +NG+L VG+R R + PS
Sbjct: 185 RGTPRRHLLTTGWSNFVNQKKLVAGDSIVFLRADNGDLCVGIRRAKRGIGGGNECPSGWN 244
Query: 190 SSQSMHLG--------------------------VLATASHAVATQTMFVVYYKPRTS-- 221
S G V+ A+ A Q +VYY PR S
Sbjct: 245 SFGGYAAGFLREDESKLMRRNGNGDNKSKVRVESVIQAATLAANGQPFEIVYY-PRASTP 303
Query: 222 QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRS 279
+F + + A+ ++ GMR+KM FE EDS F GT+ V+ P W +S WR
Sbjct: 304 EFCVRASAVRAAMQIQWCPGMRFKMPFETEDSSRISWFMGTISSVQVADPIRWPNSPWRL 363
Query: 280 LKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRL 325
L+V WDEP + RVSPW +E VA+ + P K+ R+
Sbjct: 364 LQVAWDEPDLLQNVKRVSPWLVE-LVANMPAVHLSPFSPPRKKLRI 408
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Query: 516 SPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTR 575
SP + ++ L KV M+ VGR LDL+ L Y+ L +L MF+I+ ++
Sbjct: 489 SPSYKEHWKTDLGLETGHCKVFMESEDVGRTLDLSVLGSYEELYGKLANMFEIE---NSD 545
Query: 576 TKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 609
++Y D G + GD+P+ EF +R+ I
Sbjct: 546 MLSSVLYRDAAGAIKRTGDEPFSEFLKTARRLTI 579
>gi|62633605|gb|AAX89755.1| putative auxin response factor 10 [Gossypium raimondii]
Length = 417
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 121/291 (41%), Positives = 158/291 (54%), Gaps = 29/291 (9%)
Query: 21 LPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVL 80
+P+ +LCRV ++ MA+ ETDEVYA+I L+P P+ K SF+K L
Sbjct: 53 VPALVLCRVASLKFMADTETDEVYAKILLMPLPNTELDLEHVAVFGSDNAEKPASFAKTL 112
Query: 81 TASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHL 140
T SD + GGFSV R A PPLD + P Q +VA D+HG W+F+HI+RG PRRHL
Sbjct: 113 TQSDANNGGGFSVPRYCAETIFPPLDYTEDPPVQTVVAVDVHGETWKFRHIYRGTPRRHL 172
Query: 141 LTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMP---SSVIS------S 191
LTTGWSTFV K+LVAGD+ VFLR ENG L VG+R R + P S +S S
Sbjct: 173 LTTGWSTFVNHKKLVAGDSIVFLRSENGGLCVGIRRAKRGTGNGPEAGSPFLSFLREDES 232
Query: 192 QSMHL---------------GVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAV 234
+ M + VL A+ A + Q VVYY PR S +F + + A+
Sbjct: 233 KMMMMNRNGDWRGKGKLKAEAVLQAATLAASGQPFEVVYY-PRASTPEFCVKASSVKAAM 291
Query: 235 NNKFAVGMRYKMRFEGEDSPE-RRFSGTVVGVEDFSP-HWKDSKWRSLKVQ 283
+ GMR+KM FE EDS F GTV V+ P W +S WR +++
Sbjct: 292 RVPWCCGMRFKMAFETEDSSRISWFMGTVSSVQVVDPIRWPNSPWRLFQLE 342
>gi|222629220|gb|EEE61352.1| hypothetical protein OsJ_15485 [Oryza sativa Japonica Group]
Length = 699
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 128/337 (37%), Positives = 167/337 (49%), Gaps = 44/337 (13%)
Query: 20 RLPSKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQ------NEPTTPDPCPADSPRPK 72
R+P + CRVV + MA+ E+DEV+A+I L+P P ++ RP+
Sbjct: 62 RVPPLVPCRVVAVRFMADAESDEVFAKIRLVPLRPGDAVVDVGEAAAAEARREEENSRPR 121
Query: 73 VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIF 132
SF+K LT SD + G R A P LD + P Q + AKD+HG EW F+HI+
Sbjct: 122 PTSFAKTLTQSDANNGRGVLRARFCAETIFPELDYSSEPPVQSVCAKDVHGVEWTFRHIY 181
Query: 133 RGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPS-----S 187
RG PRRHLLTTGWS FV K+L AGD+ VF+R E G +HVG+R R S+ S
Sbjct: 182 RGTPRRHLLTTGWSPFVNKKQLTAGDSIVFMRDEGGNIHVGLRRAKRGFCSIGGDDESLS 241
Query: 188 VISSQSMHLG-------------------------VLATASHAVATQTMFVVYYKPRTS- 221
I + G VL A+ A Q V+YY PR S
Sbjct: 242 SIPGWDQYRGLMRRNATATATGGRTPPKGKVPPENVLTAATRATTGQPFEVLYY-PRAST 300
Query: 222 -QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWR 278
+F + A+ ++ GMR+KM FE EDS F GTV GV+ P W S WR
Sbjct: 301 PEFCVRAAAVRTAMAVQWCPGMRFKMAFETEDSSRISWFMGTVAGVQASDPVRWPQSPWR 360
Query: 279 SLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQP 315
L+V WDEP + RV PW +E + S+ PNL P
Sbjct: 361 LLQVTWDEPELLQNVKRVCPWLVE--LVSSMPNLHLP 395
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 522 SKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIV 581
S+ S N + KV ++ VGR+LDL+ L ++ L L +MF I G R+ +V
Sbjct: 604 SRASEYELNPGQCKVFVESETVGRSLDLSALSSFEELYACLSDMFSI-GSDELRS--HLV 660
Query: 582 YTDDEGDMMLVGDDPWHEFCNMVKRIFI 609
Y G++ GD+P+ F +++ I
Sbjct: 661 YRSPAGEVKHAGDEPFCAFVKSARKLRI 688
>gi|297724575|ref|NP_001174651.1| Os06g0196700 [Oryza sativa Japonica Group]
gi|255676813|dbj|BAH93379.1| Os06g0196700 [Oryza sativa Japonica Group]
Length = 309
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 112/228 (49%), Positives = 155/228 (67%), Gaps = 4/228 (1%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQNEPT 59
EQ+ AS ++EL+ IP + LPSK++C+++++ L A+ ETDEVYAQ+TL P +
Sbjct: 52 EQVAASMHKELDN-IPGYPSLPSKLICKLLSLTLHADSETDEVYAQMTLQPVNKYDRDAM 110
Query: 60 TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
+ F K LTASDTSTHGGFSV R+ A + PPLD P QEL+AK
Sbjct: 111 LASELGLKQNKQPAEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFTMQPPAQELIAK 170
Query: 120 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
DLH W+F+HI+RGQP+RHLLTTGWS FV++KRL+AGD+ +F+R E +L +G+R R
Sbjct: 171 DLHDISWKFRHIYRGQPKRHLLTTGWSVFVSTKRLLAGDSVLFIRDEKSQLLLGIRRATR 230
Query: 180 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPR-TSQFIIS 226
Q ++ SSV+SS SMH+G+LA A+HA A + F ++Y PR S ++IS
Sbjct: 231 PQPALSSSVLSSDSMHIGILAAAAHAAANSSPFTIFYNPRYYSSYLIS 278
>gi|413919918|gb|AFW59850.1| hypothetical protein ZEAMMB73_643249 [Zea mays]
gi|413919919|gb|AFW59851.1| hypothetical protein ZEAMMB73_643249 [Zea mays]
Length = 834
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 134/335 (40%), Positives = 189/335 (56%), Gaps = 33/335 (9%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP--EPSQNEP 58
EQ+ ASTN+E++ IP + LP +++C++ ++ + A+ ETDEVYAQ+TL P QN+P
Sbjct: 52 EQVAASTNKEVDGHIPNYPNLPPQLICQLHDVTMHADVETDEVYAQMTLQPLNPQEQNDP 111
Query: 59 TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPL------------- 105
P S +P + F K LTASDTSTHGGFSV R+ A PPL
Sbjct: 112 YLPAEMGIMSKQP-TNYFCKTLTASDTSTHGGFSVPRRAAERVFPPLLHAGLFGLLLQIT 170
Query: 106 ---DMNQSTPTQELVAKDLHG-YEWRFKHIFRG----QPRRHLLTTGWSTFVTSKRLVAG 157
Q P ++L W + + R +P R + T T++R
Sbjct: 171 GGIVCRQRIPLSSRQRQELRNPGSWNGRALARKSRTEKPCRTIETGRCWIVGTAQRRTGW 230
Query: 158 DTFV----FLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 213
V L E +L +G+R +R Q+ MPSSV+SS SMH+G+LA A+HA AT + F
Sbjct: 231 PCGVPGGPGLGNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFT 290
Query: 214 VYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP 270
+++ PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+ V D P
Sbjct: 291 IFFNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTITEVSDADP 350
Query: 271 -HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 304
W S WRS+KV WDE + RP RVS WEIEP
Sbjct: 351 VRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPL 385
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 61/97 (62%), Gaps = 4/97 (4%)
Query: 529 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 586
+ R+ KV G +VGR+LD+T Y L +EL +MF IKGQL R+ W++V+ D E
Sbjct: 733 TTRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRE 791
Query: 587 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS-PGS 622
D++L+GDDPW F N V I I S +DV KM PG+
Sbjct: 792 NDVLLLGDDPWESFVNSVWYIKILSPEDVHKMGKPGN 828
>gi|359473508|ref|XP_003631311.1| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 7-like [Vitis
vinifera]
Length = 247
Score = 195 bits (495), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 102/185 (55%), Positives = 121/185 (65%), Gaps = 35/185 (18%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
ME LEAS +QEL+Q++P F LPSKILC+ VN ++ I
Sbjct: 66 MEXLEASMHQELDQKMPSFNLPSKILCKXVNF----------IHNCI------------- 102
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
VH F K LTASDTSTHGGFSVLR+H ECLPPLDM+Q+ P QELVAKD
Sbjct: 103 ------------VHPFCKTLTASDTSTHGGFSVLRRHTDECLPPLDMSQNPPWQELVAKD 150
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
+HG E F+HIF+GQPR HLLTTGWS FV++KRL GD +FLR ENGEL VGVR L RQ
Sbjct: 151 MHGNEXPFRHIFQGQPRCHLLTTGWSVFVSTKRLAVGDALIFLRKENGELCVGVRRLTRQ 210
Query: 181 QSSMP 185
+++P
Sbjct: 211 LNNVP 215
>gi|224069455|ref|XP_002326354.1| predicted protein [Populus trichocarpa]
gi|222833547|gb|EEE72024.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 137/370 (37%), Positives = 175/370 (47%), Gaps = 59/370 (15%)
Query: 26 LCRVVNIHLMAEQETDEVYAQITLLPEPSQ------NEPTTPDPCPADSPRPKVHSFSKV 79
LCRV +I MA+ ETDEV+A+I L+P S E A K SF+K
Sbjct: 68 LCRVSDIKFMADPETDEVFAKIRLVPINSNELDLDDQEVAVNGGMEAAQDNNKPVSFAKT 127
Query: 80 LTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRH 139
LT SD + GGFSV R A P LD P Q L+AKD+HG W+F+HI+RG PRRH
Sbjct: 128 LTQSDANNGGGFSVPRYCAEMIFPRLDYTADPPVQTLLAKDVHGETWKFRHIYRGTPRRH 187
Query: 140 LLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVI---------- 189
LLTTGWS FV K+L+AGD+ VF R ENG+L VGVR R P S+
Sbjct: 188 LLTTGWSPFVNHKKLIAGDSVVFFRAENGDLCVGVRRAKRTSGGGPESLWNPAGGSSAVP 247
Query: 190 ---------------------------SSQSMHLGVLATASHAVATQTM------FVVYY 216
S++S+ A + T+ F V Y
Sbjct: 248 SGGFGAFLREDEHKLMRSASGNGNGSKSNESLMGQGKVRAESVIQAVTLAANGLPFEVVY 307
Query: 217 KPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDF-SPHW 272
PR T +F + + A+ ++ GMR+KM FE EDS F GTV V+ S W
Sbjct: 308 YPRANTPEFCVKASLVKTAMQIRWCSGMRFKMAFETEDSSRISWFMGTVCSVQAADSLWW 367
Query: 273 KDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPP- 331
S WR L+V WDEP + RVSPW +E +AS + P + PR + +P
Sbjct: 368 PHSPWRLLQVTWDEPDLLQNVKRVSPWLVE--LASNMAAIHFPPFSS---PRKKLRLPQH 422
Query: 332 LDLPSAASAP 341
LD P P
Sbjct: 423 LDFPIDGQFP 432
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 5/101 (4%)
Query: 511 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 570
E++Q + + Q + L + KV M VGR LDL+ L Y+ L +L MF ++
Sbjct: 601 EELQWNKDKHQKSEPSLET--GHCKVFMDSEDVGRTLDLSLLGSYEELYRKLANMFGLR- 657
Query: 571 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICS 611
++ ++Y D G +G++P+ +F +R+ I +
Sbjct: 658 --NSEKFSNVLYRDINGITKHIGEEPFSDFFKTARRLTIVT 696
>gi|259027684|gb|ACV91103.1| putative ETTIN protein [Petunia x hybrida]
Length = 241
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 98/207 (47%), Positives = 132/207 (63%), Gaps = 10/207 (4%)
Query: 25 ILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPD-PCPADSPRPKV---------H 74
+ CRVV+++L A+ DEVYAQ+ L+P+ Q E D AD+ + H
Sbjct: 30 VFCRVVDVNLQADTVNDEVYAQVPLVPDNQQIEQKWRDGDIDADTEEEDLEGAGKSTTPH 89
Query: 75 SFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG 134
F K LTASDTSTHGGFSV R+ A +C PPLD Q P+QELVAKDLHG W+F+HI+RG
Sbjct: 90 MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGMGWKFRHIYRG 149
Query: 135 QPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSM 194
QPRRHLLTTGWS FV K+LV+GD +FLR +GEL +GVR A+ ++ SQ +
Sbjct: 150 QPRRHLLTTGWSAFVNKKKLVSGDAVLFLRTGDGELRLGVRRAAQAKTCSNYLAPYSQLL 209
Query: 195 HLGVLATASHAVATQTMFVVYYKPRTS 221
++ + +A++++ F + Y PR S
Sbjct: 210 NVSGIVDVVNAISSRNAFNICYNPRAS 236
>gi|357164725|ref|XP_003580146.1| PREDICTED: auxin response factor 8-like [Brachypodium distachyon]
Length = 715
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 125/352 (35%), Positives = 170/352 (48%), Gaps = 48/352 (13%)
Query: 20 RLPSKILCRVVNIHLMAEQETDEVYAQITLLP----EPSQN---EPTTPDPCPADSPRPK 72
R+P + CRV + MA+ ++DEV+A+I LLP EP + +P D+ K
Sbjct: 63 RVPDLVPCRVSAVRFMADPQSDEVFAKIRLLPLRRGEPVADVGEAAAAREPLQQDADNNK 122
Query: 73 VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIF 132
SF+K LT SD + GGFSV R A P LD P Q + +D+HG E++F+HI+
Sbjct: 123 PASFAKTLTQSDANNGGGFSVPRFCAETIFPALDYGAEPPVQSIFVRDVHGEEFKFRHIY 182
Query: 133 RGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGE---------NGELHVGVRCLARQQSS 183
RG PRRHLLTTGWS FV K+L+AGD+ VFLR + + R
Sbjct: 183 RGTPRRHLLTTGWSNFVNQKKLLAGDSVVFLRASGEGGGGGEVHVGIRRARRVFCGADVE 242
Query: 184 MPSSVISSQSMHLGVLATASHAVATQT-------------------------MFVVYYKP 218
PSS S + G++ + + +F V Y P
Sbjct: 243 GPSSAASGWDHYRGLMRGNASSGNDGGGKGNNNNKVTAEDVAAAARLAAAGQVFEVVYYP 302
Query: 219 RTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKD 274
R S +F + A+ ++ GMR+KM FE EDS F GTV GV P HW
Sbjct: 303 RASTPEFCVRAGAVKAAMQVRWCPGMRFKMAFETEDSSRISWFMGTVAGVCAADPVHWPQ 362
Query: 275 SKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLA-KNKRPRL 325
S WR L+V WDEP + RV PW +E + S+ PNL P + K+PR+
Sbjct: 363 SPWRLLQVSWDEPELLQNVKRVCPWLVE--LVSSMPNLHLPSFSPPRKKPRI 412
Score = 46.2 bits (108), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 532 SRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMML 591
+ KV ++ A+GR LDL+ L ++ L + +MFDI+ + + Y G++
Sbjct: 636 GQCKVFVESDAIGRNLDLSQLSSFEELYSRMSDMFDIE---SAELRNNVHYRSAAGEVKN 692
Query: 592 VGDDPWHEFCNMVKRIFI 609
VGD+P+ F +R+ I
Sbjct: 693 VGDEPFRAFVKSARRLTI 710
>gi|356533969|ref|XP_003535530.1| PREDICTED: auxin response factor 18-like [Glycine max]
Length = 608
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 126/338 (37%), Positives = 167/338 (49%), Gaps = 46/338 (13%)
Query: 20 RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPC--------PADSPRP 71
R+P I CR+ + MA+ +TDEVY ++ L P + D C ++
Sbjct: 55 RVPPLIPCRLSAMKYMADPDTDEVYVKMRLTPLREHELLDSQDDCFLGNTNSGGVENQEK 114
Query: 72 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 131
SF+K LT SD + GGFSV R A P LD + P Q ++AKD+HG W+F+HI
Sbjct: 115 PPTSFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMHGQCWKFRHI 174
Query: 132 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR------------ 179
+RG PRRHLLTTGWS FV KRLVAGD+ VFLR ENG+L VG+R +
Sbjct: 175 YRGTPRRHLLTTGWSNFVNQKRLVAGDSIVFLRAENGDLCVGIRRAKKGIGGGTEFSSGW 234
Query: 180 --------------QQSSMPSSVISSQSMHL-------GVLATASHAVATQTMFVVYYKP 218
+SS S S + V+ + AV + VVYY P
Sbjct: 235 NNPLFGGGGGFLCGSESSFVSGAKSGGDHEIVGRVAPESVVEAVTCAVNGRPFEVVYY-P 293
Query: 219 RTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKD 274
R S +F + + A+ ++ GMR+KM FE EDS F GT+ V+ P W D
Sbjct: 294 RASSPEFCVKASVVKAAMQIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVADPIRWPD 353
Query: 275 SKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL 312
S WR L+V WDEP + V+PW +E T NL
Sbjct: 354 SPWRLLQVVWDEPDLLQNVKCVNPWLVELVSNMPTFNL 391
>gi|350540040|ref|NP_001234880.1| auxin response factor 16 [Solanum lycopersicum]
gi|300253178|gb|ADJ96591.1| auxin response factor 16 [Solanum lycopersicum]
Length = 671
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 131/368 (35%), Positives = 183/368 (49%), Gaps = 55/368 (14%)
Query: 18 LFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFS 77
L R+P+ ILCRV + +A+ ETDEVYA+I L+P E D ++ +P F+
Sbjct: 51 LARIPAMILCRVDAVKFLADTETDEVYAKIRLIPV----EDFEDDSVVEETEKPAF--FA 104
Query: 78 KVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPR 137
K LT SD + GGFSV R A P LD P Q + AKD+HG W F+HI+RG PR
Sbjct: 105 KTLTQSDANNGGGFSVPRYCAETIFPKLDFTADPPVQVVKAKDVHGVTWNFRHIYRGTPR 164
Query: 138 RHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR------------------ 179
RHLLT+GWS FV K+LVAG + VF++ EN EL VG+R + R
Sbjct: 165 RHLLTSGWSAFVNKKKLVAGGSVVFVKAENDELCVGIRRVKRGGIGGPETQSGWKSTACS 224
Query: 180 --------QQSSMPSSVISSQSMHLG--------VLATASHAVATQTMFVVYY-KPRTSQ 222
+ SS ++IS V+ + A Q +VYY T +
Sbjct: 225 YGGFVTEDENSSTNGNLISYGERFRDKGKVSPDEVVRVSCLAANGQPFEIVYYPGASTPE 284
Query: 223 FIISLNKYLEAVNNKFAVGMRYKMRFEGED-SPERRFSGTVVGVEDFSP-HWKDSKWRSL 280
+ + + A++ ++ GMR+KM FE ED S F G++ V+ P W S WR L
Sbjct: 285 YCVKASSVRAAMSVQWCSGMRFKMAFETEDFSQISWFMGSISSVQVVDPIRWPHSLWRLL 344
Query: 281 KVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVP---PLD---- 333
+V WDEP + V+PW +E + S P++ L+ N PR + +P P D
Sbjct: 345 QVTWDEPDLLQNVKSVNPWLVE--LVSNMPDI---NLSHNSPPRKRLCLPQEFPFDGQFP 399
Query: 334 LPSAASAP 341
LPS + P
Sbjct: 400 LPSFSGNP 407
Score = 46.2 bits (108), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 527 LTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDE 586
L ++ KV + VGR LDL+ L Y L L +MF+++ +L T+ ++Y D
Sbjct: 570 LGASTDHCKVFLDSEDVGRTLDLSVLGSYAELYKRLADMFEME-RLDMVTR--VLYLDAT 626
Query: 587 GDMMLVGDDPWHEFCNMVKRIFI 609
G +GD+P+ +F KR+ I
Sbjct: 627 GASKQIGDEPFSDFIKTAKRLTI 649
>gi|326493184|dbj|BAJ85053.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 614
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 96/161 (59%), Positives = 128/161 (79%), Gaps = 9/161 (5%)
Query: 175 RCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLE 232
R RQ S++PSSVISS SMHLGVLATA HA+ T++MF VYYKPRTS +FII ++Y+E
Sbjct: 38 RRAMRQLSNVPSSVISSHSMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYME 97
Query: 233 AVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITR 292
+V N +++GMR++MRFEGE++PE+RF+GT+VG E+ W +S WRSLKV+WDEP++I R
Sbjct: 98 SVKNNYSIGMRFRMRFEGEEAPEQRFTGTIVGSENLDQLWPESNWRSLKVRWDEPSTIPR 157
Query: 293 PDRVSPWEIEPFVASATPNLVQPV-LAKNKRPRLSMEVPPL 332
PDRVSPW+IEP AS+ P V P+ L++ KRPR + VPP+
Sbjct: 158 PDRVSPWKIEP--ASSPP--VNPLPLSRVKRPRPN--VPPV 192
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 110/192 (57%), Gaps = 17/192 (8%)
Query: 447 KTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSD---GKSDIAK 503
K G+ ++FG ++ T+SAPS + + ++ T ++A+ + D
Sbjct: 401 KAREGSGFKIFGFKV---DTTSAPSNHLSSTMAVIHEPVLQTQASASLTQLQHAHIDCIP 457
Query: 504 EF---------KEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVG 554
E EK +Q S K+ QSK S S RS TKV QGVA+GR++DL+
Sbjct: 458 ELSVSTAGTTENEKSIQQAPNSSKDVQSK-SHGASTRSCTKVHKQGVALGRSVDLSKFGD 516
Query: 555 YDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQ 613
YD L EL+ MF+ G+L + + W+IVYTD EGDMMLVGDDPW EFC++V++IFI + +
Sbjct: 517 YDELTAELDRMFEFGGELMSSNRDWQIVYTDPEGDMMLVGDDPWEEFCSIVRKIFIYTKE 576
Query: 614 DVKKMSPGSKLP 625
+V+KM+ S P
Sbjct: 577 EVQKMNSKSSTP 588
>gi|297599632|ref|NP_001047488.2| Os02g0628600 [Oryza sativa Japonica Group]
gi|255671107|dbj|BAF09402.2| Os02g0628600 [Oryza sativa Japonica Group]
Length = 381
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 116/296 (39%), Positives = 156/296 (52%), Gaps = 30/296 (10%)
Query: 20 RLPSKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSK 78
R+P+ + CRV ++ MA+ +TDEV+A+I L+P +++ D A K SF+K
Sbjct: 63 RVPALVPCRVASVRYMADPDTDEVFARIRLVPLRAAEDGDVEEDGAAAGEEHEKPASFAK 122
Query: 79 VLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRR 138
LT SD + GGFSV R A P LD P Q +VAKD+HG W F+HI+RG PRR
Sbjct: 123 TLTQSDANNGGGFSVPRYCAETIFPRLDYAADPPVQTVVAKDVHGVAWNFRHIYRGTPRR 182
Query: 139 HLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR------C---------------- 176
HLLTTGWSTFV K+LVAGD+ VFLRG+ G+LHVG+R C
Sbjct: 183 HLLTTGWSTFVNQKKLVAGDSIVFLRGDGGDLHVGIRRAKRGFCGGGGGAEEASLPGWDQ 242
Query: 177 ---LARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYL 231
L R +S ++ + L A+ F V Y PR S +F +
Sbjct: 243 YGGLMRGNASPCAAAKGRGKVRAEDLVEAARLANGGQPFEVVYYPRASTPEFCVRAAAVR 302
Query: 232 EAVNNKFAVGMRYKMRFEGEDSPE-RRFSGTVVGVEDFSP-HWKDSKWRSLKVQWD 285
A+ ++ GMR+KM FE EDS F GTV V+ P W S WR L+V+++
Sbjct: 303 AAMRVQWCPGMRFKMAFETEDSSRISWFMGTVASVQVADPIRWPQSPWRLLQVRYN 358
>gi|15218584|ref|NP_175062.1| auxin response factor 23 [Arabidopsis thaliana]
gi|46576660|sp|Q9LP07.2|ARFW_ARATH RecName: Full=Putative auxin response factor 23
gi|332193887|gb|AEE32008.1| auxin response factor 23 [Arabidopsis thaliana]
Length = 222
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 99/175 (56%), Positives = 121/175 (69%), Gaps = 6/175 (3%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
+E +EAST +ELN+ P LPSK+ CRV+ IHL E +DE Y +ITL+P+ +Q T
Sbjct: 54 IELVEASTREELNELQPNCDLPSKLQCRVIAIHLKVENNSDETYVEITLMPDTTQVVIPT 113
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
+ + RP V+SF+KVLTASDTS G FSV KHA ECLPPLDM+Q P QEL+A D
Sbjct: 114 EN---ENQFRPIVNSFTKVLTASDTSAQGEFSVPCKHAIECLPPLDMSQPIPAQELIAID 170
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR 175
LHG +WRFKH +R PR TTGW+ F TSK+LV GD VF RGE GEL VG+R
Sbjct: 171 LHGNQWRFKHSYR-VPRGD--TTGWNAFTTSKKLVVGDVIVFARGETGELRVGIR 222
>gi|301069369|ref|NP_001170537.2| auxin response factor 21 [Zea mays]
gi|295844316|gb|ADG43155.1| auxin response factor 21 [Zea mays]
Length = 698
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 122/332 (36%), Positives = 162/332 (48%), Gaps = 38/332 (11%)
Query: 16 IPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHS 75
+P R+P+ +LCRV + +A+ +TDEV A++ L P NEP D + K S
Sbjct: 62 LPAGRVPALVLCRVDAVRFLADPDTDEVLARVRLAPV-RPNEPDHADAAAPGAREDKPAS 120
Query: 76 FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQ 135
F+K LT SD + GGFSV R A P LD + P Q ++AKD+HG W+F+HI+RG
Sbjct: 121 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGT 180
Query: 136 PRRHLLTTGWSTFVTSKRLVAGDTFVFLR-GENGELHVGVRCLARQQSSMPSSVISSQSM 194
PRRHLLTTGWS FV KRLVAGD+ VF+R G G+L VG+R + Q
Sbjct: 181 PRRHLLTTGWSAFVNQKRLVAGDSIVFMRTGGTGDLCVGIRRAKKGGIGGGPEFPHHQPP 240
Query: 195 HLGVLATASHAVAT-----------------QTMFVVYYKPRTSQFIISLNKYLEAVN-- 235
G +T +PR + + YL N
Sbjct: 241 DGGGYGYGYAGFSTFLRGEEDDEGQGQGAGAAGGGRRGRQPRGERAAVRGGLYLPKANTQ 300
Query: 236 -------------NKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSL 280
++ GMR+KM FE EDS F GTV V+ P W +S WR L
Sbjct: 301 SCASRRGRSAHHVTQWCAGMRFKMAFETEDSSRISWFMGTVAAVQVADPIRWPNSPWRLL 360
Query: 281 KVQWDEPASITRPDRVSPWEIEPFVASATPNL 312
+V WDEP + RVSPW +E + S+TP +
Sbjct: 361 QVAWDEPDLLQNVKRVSPWLVE--LVSSTPAI 390
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 535 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI-KGQLHTRTKWEIVYTDD-EGDMMLV 592
KV MQ VGR LDL+ + Y+ L L +MF + + +L + + Y D G +
Sbjct: 621 KVFMQSEDVGRTLDLSAVASYEELYQRLADMFGVDRAELTS----HVFYRDGASGALKHA 676
Query: 593 GDDPWHEFCNMVKRIFI 609
GD+P+ EF +R+ I
Sbjct: 677 GDEPFSEFTKTARRLTI 693
>gi|356574605|ref|XP_003555436.1| PREDICTED: auxin response factor 18-like [Glycine max]
Length = 589
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 128/338 (37%), Positives = 169/338 (50%), Gaps = 48/338 (14%)
Query: 20 RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPC---------PADSPR 70
R+P I CR+ + MA+ +TDEVY ++ L P + D C D +
Sbjct: 54 RVPPLIPCRLSAMKYMADPDTDEVYVKMRLTPLREHELLDSQDDCFLGNSAGGGGVDQGQ 113
Query: 71 PKV-HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFK 129
K SF+K LT SD + GGFSV R A P LD + P Q ++AKD+ G W+F+
Sbjct: 114 EKPPTSFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMLGQCWKFR 173
Query: 130 HIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR-------------- 175
HI+RG PRRHLLTTGWS FV KRLVAGD+ VFLR ENG+L VG+R
Sbjct: 174 HIYRGTPRRHLLTTGWSNFVNQKRLVAGDSIVFLRAENGDLCVGIRRAKKGIGGGTEFSS 233
Query: 176 -----------CLARQQSSMPSSVISSQSMHLG------VLATASHAVATQTMFVVYYKP 218
L +S++ S M +G V+ + AV + VVYY P
Sbjct: 234 GGWNNPLFGGGFLCGSESNLMSG--GDHEMLVGRVAAESVVEAVTCAVNGRPFEVVYY-P 290
Query: 219 RTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKD 274
R S +F + + A+ ++ GMR+KM FE EDS F GT+ V+ P W D
Sbjct: 291 RASSPEFCVKASVVKAAMQIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVADPILWPD 350
Query: 275 SKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL 312
S WR L+V WDEP + V+PW +E T NL
Sbjct: 351 SPWRLLQVVWDEPDLLQNVKCVNPWLVELVSNMPTFNL 388
>gi|226528158|ref|NP_001140452.1| hypothetical protein [Zea mays]
gi|194699576|gb|ACF83872.1| unknown [Zea mays]
gi|413934017|gb|AFW68568.1| hypothetical protein ZEAMMB73_208127 [Zea mays]
Length = 373
Score = 188 bits (478), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 124/302 (41%), Positives = 159/302 (52%), Gaps = 43/302 (14%)
Query: 21 LPSKILCRVVNIHLMAEQETDEVYAQITLLP----EPSQNEPTTPDPCPADSPRPKVHSF 76
LP +LC V + +A+ ETDEV+A+I L+P E EP P D+ R K+ SF
Sbjct: 60 LPPLVLCTVAGVRFLADPETDEVFAKIRLVPAAPGEVEFGEPREFGIDPEDA-REKLSSF 118
Query: 77 SKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQP 136
+K LT SD + GGFSV R A P LD P Q ++AKD+HG W+F+HIFRG P
Sbjct: 119 AKTLTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIFRGTP 178
Query: 137 RRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQ-------SSMPSSVI 189
RRHLLTTGWS FV K+LVAGD+ VFLR E+GEL VG+R R S + V
Sbjct: 179 RRHLLTTGWSAFVNQKKLVAGDSIVFLRTEHGELCVGIRRAKRVSCGGMECISGWNAPVY 238
Query: 190 SSQSMHL------------------------GVLATASHAVATQTMFVVYYKPRTS--QF 223
+ S L V+ AS A + Q VVYY PR S +F
Sbjct: 239 GALSAFLKDEEGKITKGPGGYMRGRGKVEITDVVEAASLAASGQPFEVVYY-PRASTPEF 297
Query: 224 IISLNKYLEAVNNKFAVGMRYKMRFEGEDSPE-RRFSGTVVG--VEDFSPHWKDSKWRSL 280
++ A+ N++ GMR+KM FE EDS F GT+ V D + W +S WR L
Sbjct: 298 VVKAASVQNAMRNQWCPGMRFKMAFETEDSSRISWFMGTIASAQVAD-TIRWPNSPWRLL 356
Query: 281 KV 282
+V
Sbjct: 357 QV 358
>gi|359492813|ref|XP_002284328.2| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 17-like
[Vitis vinifera]
Length = 593
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 129/321 (40%), Positives = 172/321 (53%), Gaps = 38/321 (11%)
Query: 18 LFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPD--------PCPADSP 69
+F PS +LCRVV + +A+Q+TDEV+A+I L P E T + D
Sbjct: 55 VFSKPS-VLCRVVAVWFLADQDTDEVFAKIRLEPVGRSWESGTMERRRVGDGDDDKEDEG 113
Query: 70 RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFK 129
KV SF K+LT+SD + GGFSV R A PPL+ P Q L+ DL G +W F+
Sbjct: 114 EDKVMSFVKILTSSDANNGGGFSVPRFCADYIFPPLNFQADPPVQHLLFTDLRGTKWDFR 173
Query: 130 HIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFL-RGENGELHVGVRCLARQ-------- 180
HI+RG PRRHLLTTGWS FV K+LVAGD+ VF+ R N EL +GVR AR
Sbjct: 174 HIYRGTPRRHLLTTGWSKFVNDKKLVAGDSVVFMKRNSNSELFIGVRRDARWNRNGERWS 233
Query: 181 -QSSMPSSVISSQSMHLGVLATASHA------------VATQTM-FVVYYKPR--TSQFI 224
+S++ +V + + + + +S +A Q M F V Y PR +S F+
Sbjct: 234 FRSALAGAVKAKEVGSIEGFSRSSSGRVRAEEVAVAAELAAQGMPFEVVYYPRVGSSDFV 293
Query: 225 ISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTV--VGVEDFSPHWKDSKWRSLK 281
+ EA++ + GMR KM E EDS + F GTV V D P W+ S WR L+
Sbjct: 294 VKAEVVEEALSVFWTGGMRVKMAMETEDSSKTSLFQGTVSSATVMDNGP-WRGSLWRMLQ 352
Query: 282 VQWDEPASITRPDRVSPWEIE 302
V WDEP + RVSPW++E
Sbjct: 353 VTWDEPEVLQNVMRVSPWQVE 373
>gi|413943302|gb|AFW75951.1| hypothetical protein ZEAMMB73_807339 [Zea mays]
Length = 690
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 124/345 (35%), Positives = 168/345 (48%), Gaps = 72/345 (20%)
Query: 16 IPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHS 75
+P R+P+ +LCRV + +A+ +TDEV A++ L P NEP D + K S
Sbjct: 62 LPAGRVPALVLCRVDAVRFLADPDTDEVLARVRLAPV-RPNEPDHADAAAPGAREDKPAS 120
Query: 76 FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQ 135
F+K LT SD + GGFSV R A P LD + P Q ++AKD+HG W+F+HI+RG
Sbjct: 121 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGT 180
Query: 136 PRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR-------------------- 175
PRRHLLTTGWS FV KRLVAGD+ VF+R NG+L VG+R
Sbjct: 181 PRRHLLTTGWSAFVNQKRLVAGDSIVFMRTGNGDLCVGIRRAKKGGIGGGPEFPHHQPPD 240
Query: 176 ---------------------CLARQQSSM---PSSVISSQSMHLGVLATASHAVATQTM 211
AR + + P V+ + ++ A + Q
Sbjct: 241 GGGYGYGYAGFSTFLRGEEDDAAARGKVRVLVRPEEVVEAANL----------AASGQPF 290
Query: 212 FVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDF 268
VVYY PR S +F + A+ ++ GMR+KM FE EDS F GTV V+
Sbjct: 291 EVVYY-PRASTPEFCVKAGAVRAAMRTQWCAGMRFKMAFETEDSSRISWFMGTVAAVQVA 349
Query: 269 SP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL 312
P W +S WR L+ RVSPW +E + S+TP +
Sbjct: 350 DPIRWPNSPWRLLQ----------NVKRVSPWLVE--LVSSTPAI 382
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 535 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI-KGQLHTRTKWEIVYTDD-EGDMMLV 592
KV MQ VGR LDL+ + Y+ L L +MF + + +L + + Y D G +
Sbjct: 613 KVFMQSEDVGRTLDLSAVASYEELYQRLADMFGVDRAELTS----HVFYRDGASGALKHA 668
Query: 593 GDDPWHEFCNMVKRIFI 609
GD+P+ EF +R+ I
Sbjct: 669 GDEPFSEFTKTARRLTI 685
>gi|350536255|ref|NP_001234237.1| auxin response factor 17 [Solanum lycopersicum]
gi|313509556|gb|ADR66030.1| auxin response factor 17 [Solanum lycopersicum]
Length = 622
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 128/361 (35%), Positives = 181/361 (50%), Gaps = 36/361 (9%)
Query: 21 LPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVL 80
+P+ ILCRV+++ +AE +TDEVYA+I L P SQ+E + ++ SF K+L
Sbjct: 56 MPAFILCRVLSVRFLAESDTDEVYARIFLHPI-SQSEVDEVTMREEEVVEDEIVSFVKIL 114
Query: 81 TASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHL 140
T SD + GGFSV R A P LD P Q L +D+ G W F+HI+RG PRRHL
Sbjct: 115 TPSDANNGGGFSVPRFCADSIYPRLDFGAEPPVQNLSIRDIKGVAWEFRHIYRGTPRRHL 174
Query: 141 LTTGWSTFVTSKRLVAGDTFVFL-RGENGELHVGVRCLARQQSS---MPSSVISSQSMHL 196
LTTGWS FV SK+LVAGD+ VF+ R N +L+VGVR R+ SS + + ++
Sbjct: 175 LTTGWSKFVNSKQLVAGDSAVFMRRTANNQLYVGVRRAIRRNDDSQKWTSSFLMREHINN 234
Query: 197 GVLATASHAVATQTM-----------------FVVYYKPRT--SQFIISLNKYLEAVNNK 237
G S + M F V PR + F++ + A+N
Sbjct: 235 GGSPDVSWGIRKGRMTMEAVAAVAEKAARGVPFEVSCYPRDAWAGFVVKAQEVQMALNMP 294
Query: 238 FAVGMRYKMRFEGEDSPERR-FSGTVVGV-EDFSPHWKDSKWRSLKVQWDEPASITRPDR 295
+ VGMR KM E EDS + GTV V + S W+ S WR L++ W+EP +R
Sbjct: 295 WTVGMRVKMAVEAEDSSRTACYQGTVSSVILNESGPWRGSPWRMLQITWEEPEVPQHANR 354
Query: 296 VSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQL 355
V+PW++E F P + + P +++P LP +P+ S +T L
Sbjct: 355 VNPWQVECF----------PPIPQFLPPSKKIKLPNGLLPDGERSPFPMTGLGSFPMTGL 404
Query: 356 S 356
Sbjct: 405 G 405
>gi|297610668|ref|NP_001064872.2| Os10g0479900 [Oryza sativa Japonica Group]
gi|255679498|dbj|BAF26786.2| Os10g0479900 [Oryza sativa Japonica Group]
Length = 379
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 121/310 (39%), Positives = 157/310 (50%), Gaps = 49/310 (15%)
Query: 21 LPSKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQNEPTTPDP-CP------ADSPRP- 71
LP +LCRV + +A++++DEVYA+I L P P + E PD CP A P P
Sbjct: 64 LPPLVLCRVEGVQFLADRDSDEVYAKIRLAPVAPGEAEFREPDELCPLGAAGDAAEPSPE 123
Query: 72 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 131
K SF+K LT SD + GGFSV R A P LD P Q ++AKD+HG W+F+HI
Sbjct: 124 KPTSFAKTLTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGVVWKFRHI 183
Query: 132 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISS 191
+RG PRRHLLTTGWSTFV K+LVAGD+ VFLR +GEL VG+R R +
Sbjct: 184 YRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRTRHGELCVGIRRAKRMACGGMECMSGW 243
Query: 192 QSMHLG-----------------------------------VLATASHAVATQTMFVVYY 216
+ G V+ AS A + Q V YY
Sbjct: 244 NAPGYGGGGFSAFLKEEESKLMKGHGGGGYMKGKGKVRMADVVEAASLASSGQPFEVAYY 303
Query: 217 KPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPE-RRFSGTVVGVEDFSPH-W 272
PR S F++ A+ ++ GMR+KM FE EDS F GT+ V+ P+ W
Sbjct: 304 -PRASTPDFVVKAASVQAAMRIQWCSGMRFKMAFETEDSSRISWFMGTISSVQVADPNRW 362
Query: 273 KDSKWRSLKV 282
+S WR L+V
Sbjct: 363 PNSPWRLLQV 372
>gi|449516481|ref|XP_004165275.1| PREDICTED: auxin response factor 9-like, partial [Cucumis sativus]
Length = 342
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 139/362 (38%), Positives = 191/362 (52%), Gaps = 66/362 (18%)
Query: 282 VQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAP 341
VQWDEP+SI RPD+VS WE+EP VAS P QP +NKRPR P LPS S+P
Sbjct: 1 VQWDEPSSILRPDKVSAWELEPLVAS-NPLSTQPT-QRNKRPR------PTVLPS--SSP 50
Query: 342 WSARLAQSHNLTQLSV--TAEDKRIDNHVAWHHKHSDFSSNS------NFMSRTQSDGEW 393
+ L + S AE +R + K S +SNS + + S+ W
Sbjct: 51 DATVLGGWKPTVESSTFSYAEPQR-GRDLYSSPKFSTAASNSLGFNANSSLGAVSSNNYW 109
Query: 394 LTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTS 453
+ RV +NI +H + P VE + + G
Sbjct: 110 CNTNRV--------------ENIMDPSSHGANREP-------------VEKKQNSRNG-- 140
Query: 454 CRLFGIELINHATSSAPSEKVPVSS--LTTEGHIISTISAAADSDG------KSDIAKEF 505
CRLFGI+L+ ++ E PVS+ + E ++ I + +SDI
Sbjct: 141 CRLFGIQLLGNSNV---DEASPVSTPKMGGEDRLVPPIDTDFEQHSEPSNIHRSDIPS-I 196
Query: 506 KEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEM 565
+ +SP ESQS+Q RS TKV MQG+AVGRA+DLT YD L+ +LEEM
Sbjct: 197 SCDADKSCLISPLESQSRQI-----RSCTKVHMQGIAVGRAVDLTRFNQYDDLLRKLEEM 251
Query: 566 FDIKGQL-HTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 624
FDI+G+L + KW++VYTDDE DMMLVGDDPW+EFC+MV++IFI ++++VK++SP KL
Sbjct: 252 FDIEGELCGSLKKWQVVYTDDEDDMMLVGDDPWNEFCSMVRKIFIYTTEEVKRLSPKIKL 311
Query: 625 PM 626
P+
Sbjct: 312 PL 313
>gi|115459460|ref|NP_001053330.1| Os04g0519700 [Oryza sativa Japonica Group]
gi|113564901|dbj|BAF15244.1| Os04g0519700 [Oryza sativa Japonica Group]
Length = 392
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 118/305 (38%), Positives = 153/305 (50%), Gaps = 42/305 (13%)
Query: 20 RLPSKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQ------NEPTTPDPCPADSPRPK 72
R+P + CRVV + MA+ E+DEV+A+I L+P P ++ RP+
Sbjct: 62 RVPPLVPCRVVAVRFMADAESDEVFAKIRLVPLRPGDAVVDVGEAAAAEARREEENSRPR 121
Query: 73 VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIF 132
SF+K LT SD + GGFSV R A P LD + P Q + AKD+HG EW F+HI+
Sbjct: 122 PTSFAKTLTQSDANNGGGFSVPRFCAETIFPELDYSSEPPVQSVCAKDVHGVEWTFRHIY 181
Query: 133 RGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPS-----S 187
RG PRRHLLTTGWS FV K+L AGD+ VF+R E G +HVG+R R S+ S
Sbjct: 182 RGTPRRHLLTTGWSPFVNKKQLTAGDSIVFMRDEGGNIHVGLRRAKRGFCSIGGDDESLS 241
Query: 188 VISSQSMHLG-------------------------VLATASHAVATQTMFVVYYKPRTS- 221
I + G VL A+ A Q V+YY PR S
Sbjct: 242 SIPGWDQYRGLMRRNATATATGGRTPPKGKVPPENVLTAATRATTGQPFEVLYY-PRAST 300
Query: 222 -QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPE-RRFSGTVVGVEDFSP-HWKDSKWR 278
+F + A+ ++ GMR+KM FE EDS F GTV GV+ P W S WR
Sbjct: 301 PEFCVRAAAVRTAMAVQWCPGMRFKMAFETEDSSRISWFMGTVAGVQASDPVRWPQSPWR 360
Query: 279 SLKVQ 283
L+V
Sbjct: 361 LLQVH 365
>gi|357461711|ref|XP_003601137.1| Auxin response factor [Medicago truncatula]
gi|355490185|gb|AES71388.1| Auxin response factor [Medicago truncatula]
Length = 593
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 125/331 (37%), Positives = 168/331 (50%), Gaps = 45/331 (13%)
Query: 25 ILCRVVNIHLMAEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTA 82
ILC V +H +A+ +TDEV+A++ L P + + N P P D R + SF+K+LT
Sbjct: 66 ILCSVSAVHFLADPKTDEVFAKLFLQPLNDFTVNFPRIPVIEADDGER--ISSFAKILTP 123
Query: 83 SDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLT 142
SD + GGFSV R A PPLD + P Q L+ D+HG W F+HI+RG PRRHLLT
Sbjct: 124 SDANNGGGFSVPRFCADSIFPPLDYSMDPPLQNLLITDVHGLTWEFRHIYRGTPRRHLLT 183
Query: 143 TGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHL-----G 197
TGWS FV +K+LVAGD+ VF++ G + +G+R R + SS + S L G
Sbjct: 184 TGWSKFVNAKKLVAGDSVVFMKNTRGAMFIGIRRAVRFVPNRTSSGVCSDVSRLCLPICG 243
Query: 198 VL-------------ATASHA--------------VATQTM-FVVYYKPRT--SQFIISL 227
V A + H +A Q M F V Y PR S F++
Sbjct: 244 VRSRVDDEEKLVEEKAFSRHGKGKLSPVAVAEAAEMAAQGMGFEVVYYPRAGWSDFVLKA 303
Query: 228 NKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTV--VGVEDFSPHWKDSKWRSLKVQW 284
A++ + GMR KM E +DS F G V V V D W+ S WR L + W
Sbjct: 304 EVVDAAMSVTWCPGMRIKMAVETDDSSRTTWFQGVVSQVSVPDHG-AWRGSPWRMLHITW 362
Query: 285 DEPASITRPDRVSPWEIEPFVASATPNLVQP 315
DEP + VSPW++E + S TP+L P
Sbjct: 363 DEPEVLQTSKWVSPWQVE--LLSTTPSLHTP 391
>gi|224028337|gb|ACN33244.1| unknown [Zea mays]
Length = 360
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 116/280 (41%), Positives = 148/280 (52%), Gaps = 40/280 (14%)
Query: 21 LPSKILCRVVNIHLMAEQETDEVYAQITLLP----EPSQNEPTTPDPCPADSPRPKVHSF 76
LP +LC V + +A+ ETDEV+A+I L+P E EP P D+ R K+ SF
Sbjct: 60 LPPLVLCTVAGVRFLADPETDEVFAKIRLVPAAPGEVEFGEPREFGIDPEDA-REKLSSF 118
Query: 77 SKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQP 136
+K LT SD + GGFSV R A P LD P Q ++AKD+HG W+F+HIFRG P
Sbjct: 119 AKTLTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIFRGTP 178
Query: 137 RRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQ-------SSMPSSVI 189
RRHLLTTGWS FV K+LVAGD+ VFLR E+GEL VG+R R S + V
Sbjct: 179 RRHLLTTGWSAFVNQKKLVAGDSIVFLRTEHGELCVGIRRAKRVSCGGMECISGWNAPVY 238
Query: 190 SSQSMHL------------------------GVLATASHAVATQTMFVVYYKPRTS--QF 223
+ S L V+ AS A + Q VVYY PR S +F
Sbjct: 239 GALSAFLKDEEGKITKGPGGYMRGRGKVEITDVVEAASLAASGQPFEVVYY-PRASTPEF 297
Query: 224 IISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTV 262
++ A+ N++ GMR+KM FE EDS F GT+
Sbjct: 298 VVKAASVQNAMRNQWCPGMRFKMAFETEDSSRISWFMGTI 337
>gi|350537067|ref|NP_001234790.1| auxin response factor 14 [Solanum lycopersicum]
gi|310697418|gb|ADP06664.1| auxin response factor 14 [Solanum lycopersicum]
Length = 375
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 117/319 (36%), Positives = 163/319 (51%), Gaps = 46/319 (14%)
Query: 6 ASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPD--- 62
A N E + ++PS I CRV +I MAE+ETDEV+A+I L P TP+
Sbjct: 49 AGVNVEFRSDV---KIPSYIPCRVSSIKYMAERETDEVFAKIRLTPVRLSEFFETPEEEG 105
Query: 63 --PCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
+D+ R K SF+K LT SD + GGFSV + A P LD N + P Q L A D
Sbjct: 106 MVKIGSDNSR-KPLSFAKTLTQSDANNGGGFSVPKNCADTIFPTLDYNVNPPVQTLSATD 164
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 180
+HG W+F+HI+RG P RHLLTTGWSTFV K+LVAGD+ VFLR EN ++ +G+R + ++
Sbjct: 165 IHGKSWQFRHIYRGTPERHLLTTGWSTFVNQKKLVAGDSIVFLRNENDKISIGIRRIKKK 224
Query: 181 QSSM---------PS-------------------------SVISSQSMHLGVLATASHAV 206
+M PS S+I+ ++ + A+
Sbjct: 225 SVAMEPETSPWWFPSVGNLTIPRGGFSAFLRDDHNTNSSWSLINRGNVKAESVIEATKLA 284
Query: 207 ATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVG 264
F V + P+ T +F + ++ A+ + GMR+KM FE ED F GT+
Sbjct: 285 TNGQPFEVIFYPQSTTPEFFVKASRVKAALQIPWCSGMRFKMPFETEDLVISWFMGTISS 344
Query: 265 VEDFSP-HWKDSKWRSLKV 282
V+ P W DS WR L+V
Sbjct: 345 VQANDPSQWPDSPWRMLQV 363
>gi|413918947|gb|AFW58879.1| hypothetical protein ZEAMMB73_937745 [Zea mays]
Length = 588
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 115/316 (36%), Positives = 164/316 (51%), Gaps = 28/316 (8%)
Query: 22 PSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTP--------DPCPADSPRPKV 73
P + CRV + MAE +TDE++ +I L P S EP T D P V
Sbjct: 77 PPFVPCRVAGVRFMAELDTDEIFVKIRLDPLRS-GEPLTDVGEAQVVNDEAGQRQPTRPV 135
Query: 74 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 133
S +K LT SD+ + G SV R A P LD + P Q + A+D+HG EW F+H++R
Sbjct: 136 ISSAKTLTKSDSYSGGSLSVRRTCAETIFPKLDKSIKRPQQLVSARDVHGVEWTFRHVYR 195
Query: 134 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR--QQSSMPSSVISS 191
G P R+LLTTGWS FV SK++V GD+ VFLR E+G +H+G+R R ++++ ++
Sbjct: 196 GTPERNLLTTGWSDFVNSKKIVIGDSVVFLREEDGTIHIGLRRAERASRRNAYGRQLVRG 255
Query: 192 QSMHLGVLATA-----------SHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKF 238
+ G A A F V + PR + F + + +EA+ +
Sbjct: 256 NASGTGAAADGVLRAEDVVAAAVTLAAAGNPFEVVHYPRATAPAFCVRVATVIEALQVSW 315
Query: 239 AVGMRYKMRFEGED-SPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRV 296
G+R+KM FE +D S F GTV GV P W S WR L+V WDEP + +R+
Sbjct: 316 CPGLRFKMAFEAKDLSRISWFMGTVAGVGPADPARWPLSPWRFLQVTWDEPELVRNMNRL 375
Query: 297 SPWEIEPFVASATPNL 312
SPW++E + + PNL
Sbjct: 376 SPWQVE--LVATMPNL 389
>gi|357486991|ref|XP_003613783.1| Auxin response factor [Medicago truncatula]
gi|355515118|gb|AES96741.1| Auxin response factor [Medicago truncatula]
Length = 524
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 108/285 (37%), Positives = 160/285 (56%), Gaps = 20/285 (7%)
Query: 25 ILCRVVNIHLMAEQETDEVYAQITLLPEPSQ--NEPTTPDPCPADSPRPKVHSFSKVLTA 82
ILC V + L+A+ TDEV+ ++ L P ++ +EP + + KV S+SK LT
Sbjct: 60 ILCTVSAVDLLADLCTDEVFVKLLLTPVTNKGVHEPHSLEVREDKDDDKKVVSYSKTLTP 119
Query: 83 SDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLT 142
SD + G FSV + A PPLD+N P QEL D+HG W+F+H++RG P RHLLT
Sbjct: 120 SDANNGGAFSVPVECAKLIFPPLDLNTEKPFQELSISDIHGKVWKFRHVYRGTPLRHLLT 179
Query: 143 TGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGV-LAT 201
T WS FV KRLV GD+ +F++ +G + VGVR RQ ++ I+ +S V LA
Sbjct: 180 TDWSEFVDKKRLVGGDSLIFMKDSDGNISVGVR---RQTKFGGAAKITEKSFTEAVELAD 236
Query: 202 ASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPER--R 257
+ A VVYY F++ +A+N +++G+R ++ + DS +R +
Sbjct: 237 KNLAFE-----VVYYPTAKGWCNFVVDAKVVEDAMNISWSLGVRIELSSKNYDSSKRCSK 291
Query: 258 FSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 302
F GT+ + +P + WR L+V+WDEP P+RVSPWE+E
Sbjct: 292 FEGTISALS--AP---NCPWRMLEVKWDEPKVSQVPERVSPWEVE 331
>gi|326502568|dbj|BAJ95347.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 388
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 111/292 (38%), Positives = 153/292 (52%), Gaps = 32/292 (10%)
Query: 21 LPSKILCRVVNIHLMAEQETDEVYAQITLLP----EPSQNEPTTPDPCPADSPRPKVHSF 76
+P+ + CRV + MA+ +DEV+A+I L+P +P+ + RPK SF
Sbjct: 64 VPALLPCRVSAVRFMADAHSDEVFAKIRLVPLRHGDPAVDVGDAAAQGRPQDDRPKPASF 123
Query: 77 SKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQP 136
+K LT SD + GGFSV R A P LD + P Q +V +D+HG E++F+HI+RG P
Sbjct: 124 AKTLTQSDANNGGGFSVPRFCAETIFPALDYSSEPPVQSIVVRDVHGDEFKFRHIYRGTP 183
Query: 137 RRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHL 196
RRHLLTTGWS FV K+L+AGD+ VFLR + GE+HVGVR R + S +
Sbjct: 184 RRHLLTTGWSNFVNQKKLLAGDSIVFLRSDGGEVHVGVR---RAKRVFCDEGHSGWDHYR 240
Query: 197 GVL---------ATASHAVATQTM------------FVVYYKPRTS--QFIISLNKYLEA 233
G++ A A V + + F V Y PR S +F + A
Sbjct: 241 GLMRGGNAGSGDAAAKGKVPAEDVVAAARLAAAGQPFEVVYYPRASTPEFCVRAGAVRAA 300
Query: 234 VNNKFAVGMRYKMRFEGEDSPE-RRFSGTVVGVEDFSP-HWKDSKWRSLKVQ 283
+ ++ GMR+KM FE EDS F GTV G+ P W S WR L+V+
Sbjct: 301 MQVQWRPGMRFKMAFETEDSSRISWFMGTVAGIHAADPSRWPQSPWRLLQVR 352
>gi|356550817|ref|XP_003543780.1| PREDICTED: auxin response factor 17-like [Glycine max]
Length = 551
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 121/328 (36%), Positives = 172/328 (52%), Gaps = 27/328 (8%)
Query: 17 PLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPK--- 72
PL R + C V ++ +A+ +DEV+A+ L P SQ +P D A +
Sbjct: 50 PLIRSLPFVPCHVSSLDFLADPFSDEVFAKFLLTPLSQSQQQPFQNDTKEARNDDDDEDR 109
Query: 73 ----VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRF 128
V SF+K+LT SD + GGFSV R A C PPLD P Q L D+HG EWRF
Sbjct: 110 ENNGVVSFAKILTPSDANNGGGFSVPRFCADSCFPPLDFRADPPVQLLSVADIHGVEWRF 169
Query: 129 KHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPS-- 186
+HI+RG PRRHL TTGWS FV K+LVAGDT VF++ +G + VG+R AR +++ +
Sbjct: 170 RHIYRGTPRRHLFTTGWSKFVNHKKLVAGDTVVFVKDSDGIVSVGIRRAARFAAAIETPP 229
Query: 187 -------SVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNK 237
S ++ + +A A+ + A F V Y PRT + F++S E++
Sbjct: 230 PAEREGFSRSTTGRVTAEAVAAAAESAARNAPFEVVYYPRTGFADFVVSAEVVEESMKCA 289
Query: 238 FAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRV 296
+ GMR K+ E EDS + GTV + ++ WR L+V WDEP + +V
Sbjct: 290 WVGGMRVKISMETEDSSRMTWYQGTVSS----ACASENGPWRMLQVNWDEPEVLQNAKQV 345
Query: 297 SPWEIEPFVASATPNLVQPVLAKNKRPR 324
SPW++E + P + V + NKR R
Sbjct: 346 SPWQVE---LVSPPFALHTVFSPNKRLR 370
>gi|255545568|ref|XP_002513844.1| Auxin response factor, putative [Ricinus communis]
gi|223546930|gb|EEF48427.1| Auxin response factor, putative [Ricinus communis]
Length = 603
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 113/329 (34%), Positives = 155/329 (47%), Gaps = 45/329 (13%)
Query: 25 ILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTP-----------DPCPADSPRPKV 73
I C++ + +A+ TDEVY ++ L P S N P+ P D K+
Sbjct: 69 IPCQISAVQFLADPVTDEVYTKLLLFPIDSFN-PSVPVLEHSGNLEQHHGYDYDDDEDKI 127
Query: 74 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 133
+F+K+LT SD + GGFSV R A PPL+ + P Q L D+HG W F+HI+R
Sbjct: 128 VAFAKILTPSDANNGGGFSVPRFCADSIFPPLNYHAEPPVQTLTVTDIHGITWDFRHIYR 187
Query: 134 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR------------------ 175
G PRRHLLTTGWS FV K+L+AGD+ VF+R G++ +GVR
Sbjct: 188 GTPRRHLLTTGWSKFVNHKKLIAGDSVVFMRNMTGKMFIGVRRAVRPNNGGSDCARWREQ 247
Query: 176 --CLARQQSSMPSSVISSQSMHLGVLATASHAV-------ATQTMFVVYYKPRT---SQF 223
C + V G + AV A F V Y PR S F
Sbjct: 248 IACFGGGGGDVKMKVKEEGYSRNGRGKVSPEAVMEAVERAAQGFSFEVVYYPRAGWYSDF 307
Query: 224 IISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVE-DFSPHWKDSKWRSLK 281
++ + A+ ++ GMR KM E EDS F GT+ W+ S WR L+
Sbjct: 308 VVRTDVVDGALAVCWSAGMRVKMAMETEDSSRMTWFQGTIASASLPDCGLWRGSPWRMLQ 367
Query: 282 VQWDEPASITRPDRVSPWEIEPFVASATP 310
V WDEP + RVSPW++E +V+ + P
Sbjct: 368 VAWDEPEVLQNAKRVSPWQVE-YVSPSPP 395
>gi|379323230|gb|AFD01314.1| auxin response factor 17-2 [Brassica rapa subsp. pekinensis]
Length = 546
Score = 175 bits (443), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 114/316 (36%), Positives = 156/316 (49%), Gaps = 36/316 (11%)
Query: 23 SKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPC--PADSPRPKVHSFSKVL 80
S I C V +I L+A+ TDEV+A +TL P +Q++ P + KV +F+KVL
Sbjct: 57 SPIACVVSSIDLLADPITDEVFAHLTLHPAAAQDQFQFPPQSRFEEEDESEKVVTFAKVL 116
Query: 81 TASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHL 140
TASD + GGFSV R A PPLD P Q+L D+HG W F+HI+RG PRRHL
Sbjct: 117 TASDANNGGGFSVPRYCADSVFPPLDFQADPPVQKLFITDVHGGVWDFRHIYRGTPRRHL 176
Query: 141 LTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLA 200
LTTGWS FV SK+L+ GD+ VF+R E+ +GVR S SS + G
Sbjct: 177 LTTGWSKFVNSKKLICGDSVVFMRKSVHEMFIGVRRAPISNKSGGSSYYGDEYFPGGYYG 236
Query: 201 T---------------------ASHAVATQTM---FVVYYKPRT--SQFIISLNKYLEAV 234
S A+ + F V Y P S+F++ +
Sbjct: 237 VKKEDGGEKFRRVGMGKLTAEAVSEAIGKASRGLPFEVVYYPTAGWSEFVVRAEDVEAST 296
Query: 235 NNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRP 293
N + G R KM E EDS F G V S ++++ W+ L++ WDEP +
Sbjct: 297 NVYWTPGTRVKMAMETEDSSRITWFQGIV------SATFQET-WKQLQITWDEPEILQNL 349
Query: 294 DRVSPWEIEPFVASAT 309
RV+PW++E AS+T
Sbjct: 350 KRVNPWQVEAVTASST 365
>gi|356507684|ref|XP_003522594.1| PREDICTED: uncharacterized protein LOC100793208 [Glycine max]
Length = 1160
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 120/335 (35%), Positives = 162/335 (48%), Gaps = 41/335 (12%)
Query: 17 PLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLP------EPSQNEPTTPDPCPADSPR 70
PL +LCRV ++ +A+ TDEV+A++ L P A +
Sbjct: 58 PLLLSKPAVLCRVESVQFLADPLTDEVFAKLILHPVADCFASGPSAVAPAAASASAQTGE 117
Query: 71 PKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKH 130
V SFSKVLTASD + GGFSV R A PPL+ P Q L+ D+HG+ W F+H
Sbjct: 118 NNVVSFSKVLTASDANNGGGFSVPRFCADSIFPPLNFQADPPVQNLLVTDVHGFVWEFRH 177
Query: 131 IFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR-------QQSS 183
I+RG PRRHLLTTGWSTFV +K+LVAGD VF++ G L VG+R R +
Sbjct: 178 IYRGTPRRHLLTTGWSTFVNNKKLVAGDVVVFMKNSGGGLFVGIRRATRFSMGKGGDRGG 237
Query: 184 MPSSVISSQSMHL-----------------GVLATASHAVATQTM-----FVVYYKP--R 219
M V + G L+ A A + F V Y P R
Sbjct: 238 MRIRVDEEEEEEEEEEEEEEVREVFSRDGRGKLSAKVVAEAAELAARNMPFEVVYYPKER 297
Query: 220 TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFS-GTVVGVE-DFSPHWKDSKW 277
S+F++ EA+ ++ G+R K+ E +DS + GTV V + W+ S W
Sbjct: 298 WSEFVVKTEAVNEAMKVAWSPGIRVKIAAETDDSSRVSWCQGTVSSVALHGNGQWRGSLW 357
Query: 278 RSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL 312
R L+V WDEP + VSPW++E + S TP L
Sbjct: 358 RMLQVTWDEPEGLQIAKWVSPWQVE--LVSTTPAL 390
>gi|400269948|gb|AFP74910.1| auxin response factor 10 [Brassica napus]
gi|400269950|gb|AFP74911.1| auxin response factor 10 [Brassica napus]
gi|400269953|gb|AFP74912.1| auxin response factor 10 [Brassica napus]
gi|400269956|gb|AFP74913.1| auxin response factor 10 [Brassica napus]
gi|400269959|gb|AFP74914.1| auxin response factor 10 [Brassica napus]
Length = 703
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 85/166 (51%), Positives = 107/166 (64%), Gaps = 6/166 (3%)
Query: 20 RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVH----- 74
R+P ILCRV ++ +A+ ETDEVY++ITLLP P + D +P P V+
Sbjct: 50 RVPPLILCRVASVKFLADAETDEVYSKITLLPLPGNDLDLENDAVLGLTPSPDVNGNEKP 109
Query: 75 -SFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 133
SF+K LT SD + GGFSV R A P LD P Q ++AKD+HG W+F+HI+R
Sbjct: 110 ASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYR 169
Query: 134 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
G PRRHLLTTGWSTFV K+L+AGD+ VFLR E GEL VG+R R
Sbjct: 170 GTPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSETGELCVGIRRAKR 215
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 68/133 (51%), Gaps = 14/133 (10%)
Query: 209 QTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGV 265
Q VVYY PR S +F + + A+ ++ GMR+KM FE EDS F GTV V
Sbjct: 288 QAFEVVYY-PRASTPEFCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAV 346
Query: 266 EDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRP 323
+ P W +S WR L+V WDEP + RVSPW +E + S P + + P P
Sbjct: 347 QVADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVE--LVSNMPAIHLSPF-----SP 399
Query: 324 RLSMEVP-PLDLP 335
R + +P P D P
Sbjct: 400 RKKLRIPQPFDFP 412
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 535 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 594
KV M+ VGR LDL+ + Y L +L EMF I+ + T +VY D G +GD
Sbjct: 594 KVFMESEDVGRTLDLSVIGSYQELYRKLAEMFGIEERSDLLT--HVVYRDANGVTKRIGD 651
Query: 595 DPWHEFCNMVKRIFI---CSSQDVKK 617
+P+ +F KR+ I S +V+K
Sbjct: 652 EPFSDFMRATKRLTIKMDISGDNVRK 677
>gi|147843289|emb|CAN80533.1| hypothetical protein VITISV_030510 [Vitis vinifera]
Length = 624
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 129/350 (36%), Positives = 170/350 (48%), Gaps = 67/350 (19%)
Query: 18 LFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPD--------PCPADSP 69
+F PS +LCRVV + +A+Q+TDEV+A+I L P E T + D
Sbjct: 55 VFSKPS-VLCRVVAVWFLADQDTDEVFAKIRLEPVGRSWESGTMERRRVGDGDDDKEDEG 113
Query: 70 RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFK 129
KV SF K+LT+SD + GGFSV R A PPL+ P Q L+ DL G +W F+
Sbjct: 114 EDKVMSFVKILTSSDANNGGGFSVPRFCADYIFPPLNFQADPPVQHLLFTDLRGTKWDFR 173
Query: 130 HIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFL-RGENGELHVGVRCLARQ-------- 180
HI+RG PRRHLLTTGWS FV K+LVAGD+ VF+ R N EL +GVR AR
Sbjct: 174 HIYRGTPRRHLLTTGWSKFVNDKKLVAGDSVVFMKRNSNSELFIGVRRDARWNRNGERWS 233
Query: 181 -QSSMPSSVISSQSMHLGVLATASHAVAT------------QTM-FVVYYKPR--TSQFI 224
+S++ +V + + + + +S Q M F V Y PR +S F+
Sbjct: 234 FRSALAGAVKAKEVGSIEGFSRSSSGRVRAEEVAVAAELAAQGMPFEVVYYPRVGSSDFV 293
Query: 225 ISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTV--VGVEDFSPHWKDSKWRSL- 280
+ EA++ + GMR KM E EDS + F GTV V D P W+ S WR L
Sbjct: 294 VKAEVVEEALSVFWTGGMRVKMAMETEDSSKTSLFQGTVSSATVMDNGP-WRGSLWRMLQ 352
Query: 281 ----------------------------KVQWDEPASITRPDRVSPWEIE 302
KV WDEP + RVSPW++E
Sbjct: 353 TWSYLQDTKMRSLIVTFFSGLLVLDLYVKVTWDEPEVLQNVMRVSPWQVE 402
>gi|409924912|gb|AFV47362.1| auxin response factor 10 [Brassica oleracea var. oleracea]
Length = 703
Score = 172 bits (436), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 83/162 (51%), Positives = 106/162 (65%), Gaps = 6/162 (3%)
Query: 20 RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVH----- 74
R+P ILCRV ++ +A+ ETDEVY++ITLLP P + D +P P V+
Sbjct: 50 RVPPLILCRVASVKFLADAETDEVYSKITLLPLPGNDLDLENDAVLGLTPSPDVNGNEKP 109
Query: 75 -SFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 133
SF+K LT SD + GGFSV R A P LD P Q ++AKD+HG W+F+HI+R
Sbjct: 110 ASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYR 169
Query: 134 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR 175
G PRRHLLTTGWSTFV K+L+AGD+ VFLR E G+L VG+R
Sbjct: 170 GTPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSETGDLCVGIR 211
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 68/133 (51%), Gaps = 14/133 (10%)
Query: 209 QTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGV 265
Q VVYY PR S +F + + A+ ++ GMR+KM FE EDS F GTV V
Sbjct: 288 QAFEVVYY-PRASTPEFCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAV 346
Query: 266 EDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRP 323
+ P W +S WR L+V WDEP + RVSPW +E + S P + + P P
Sbjct: 347 QVADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVE--LVSNMPAIHLSPF-----SP 399
Query: 324 RLSMEVP-PLDLP 335
R + +P P D P
Sbjct: 400 RKKLRIPQPFDFP 412
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 535 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 594
KV M+ VGR LDL+ + Y L +L EMF I+ + T +VY D G +GD
Sbjct: 594 KVFMESEDVGRTLDLSVIGSYQELYRKLAEMFGIEERSDLLT--HVVYRDANGVTKRIGD 651
Query: 595 DPWHEFCNMVKRIFI 609
+P+ +F KR+ I
Sbjct: 652 EPFSDFMRATKRLTI 666
>gi|449466452|ref|XP_004150940.1| PREDICTED: auxin response factor 17-like [Cucumis sativus]
gi|449524098|ref|XP_004169060.1| PREDICTED: auxin response factor 17-like [Cucumis sativus]
Length = 550
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 110/313 (35%), Positives = 154/313 (49%), Gaps = 37/313 (11%)
Query: 27 CRVVNIHLMAEQETDEVYAQITLLP-EPSQNEPTTPDP---CP-ADSPRPKVHSFSKVLT 81
C V A+ +DEV ++ L P P Q+ P C + R ++ F+KVLT
Sbjct: 53 CIVSAADYTADPLSDEVCLKLNLNPIPPGQSVSQVVHPFSSCDDGNGQRNRIEKFAKVLT 112
Query: 82 ASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL 141
+SD + GGFSV R A PPL+ P Q L D+HG W F+HI+RG PRRHLL
Sbjct: 113 SSDANNGGGFSVPRFCADSIFPPLNYQVEPPVQTLAITDVHGVVWNFRHIYRGTPRRHLL 172
Query: 142 TTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR-----------------------CLA 178
TTGWS FV +K+L+AGD +F R + ++ VG+R C
Sbjct: 173 TTGWSKFVNNKKLIAGDAVIFARDSSRDIFVGIRRSSKSSGGGDCSKWNSQVGGGGRCNV 232
Query: 179 RQQSSMPSSVISSQSMHLG-----VLATASHAVATQTMFVVYYKPR--TSQFIISLNKYL 231
++ S S ++G +ATA+ A F V Y PR TS+F+I K
Sbjct: 233 EEKRSGDRSTDVFTRTNIGKVPAETVATAAELAAEFKPFEVVYYPRIGTSEFVIPAEKVN 292
Query: 232 EAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVE-DFSPHWKDSKWRSLKVQWDEPAS 289
++N ++ G+R KM E EDS + + + GTV WK S WR L+V W+E +
Sbjct: 293 NSLNYQWYPGIRVKMPVETEDSLKTQWYQGTVTSASVPIQGPWKGSPWRMLEVTWEETDA 352
Query: 290 ITRPDRVSPWEIE 302
+ VSPWE+E
Sbjct: 353 LQSAKFVSPWEVE 365
>gi|400269961|gb|AFP74915.1| auxin response factor 10 [Brassica napus]
Length = 703
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 83/162 (51%), Positives = 105/162 (64%), Gaps = 6/162 (3%)
Query: 20 RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVH----- 74
R+P ILCRV ++ +A+ ETDEVY++ITLLP P + D +P P V+
Sbjct: 50 RVPPLILCRVASVKFLADAETDEVYSKITLLPLPGNDLDLENDAVLGLTPSPDVNGNEKP 109
Query: 75 -SFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 133
SF+K LT SD + GGFSV R A P LD P Q ++AKD+HG +F+HI+R
Sbjct: 110 ASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETRKFRHIYR 169
Query: 134 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR 175
G PRRHLLTTGWSTFV K+L+AGD+ VFLR E GEL VG+R
Sbjct: 170 GTPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSETGELCVGIR 211
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 68/133 (51%), Gaps = 14/133 (10%)
Query: 209 QTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGV 265
Q VVYY PR S +F + + A+ ++ GMR+KM FE EDS F GTV V
Sbjct: 288 QAFEVVYY-PRASTPEFCVKASDVRSAMRIRWCSGMRFKMAFETEDSLRISWFMGTVSAV 346
Query: 266 EDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRP 323
+ P W +S WR L+V WDEP + RVSPW +E + S P + + P P
Sbjct: 347 QVADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVE--LVSNMPAIHLSPF-----SP 399
Query: 324 RLSMEVP-PLDLP 335
R + +P P D P
Sbjct: 400 RKKLRIPQPFDFP 412
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 535 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 594
KV M+ VGR LDL+ + Y L +L EMF I+ + T +VY D G +GD
Sbjct: 594 KVFMESEDVGRTLDLSVIGSYQELYRKLAEMFGIEERSDLLT--HVVYRDANGVTKRIGD 651
Query: 595 DPWHEFCNMVKRIFI---CSSQDVKK 617
+P+ +F KR+ I S +V+K
Sbjct: 652 EPFSDFMRATKRLTIKMDISGDNVRK 677
>gi|297839643|ref|XP_002887703.1| hypothetical protein ARALYDRAFT_895674 [Arabidopsis lyrata subsp.
lyrata]
gi|297333544|gb|EFH63962.1| hypothetical protein ARALYDRAFT_895674 [Arabidopsis lyrata subsp.
lyrata]
Length = 572
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 110/328 (33%), Positives = 157/328 (47%), Gaps = 46/328 (14%)
Query: 23 SKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTP---------DPCPADSPRPKV 73
S + C + +I L+A+ TDEV+A + L +P E TP D D+ KV
Sbjct: 61 SPVPCLITSIQLLADPITDEVFAHLVL--QPVTQEQFTPTNYSRFGRYDGDVDDNN--KV 116
Query: 74 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 133
+F+K+LT SD + GGFSV R A PPLD P Q+L D+HG W F+HI+R
Sbjct: 117 TTFAKILTPSDANNGGGFSVPRFCADSVFPPLDFQIDPPVQKLYITDIHGAVWDFRHIYR 176
Query: 134 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR------------------ 175
G PRRHLLTTGWS FV SK+L+AGD+ VF++ E+ +GVR
Sbjct: 177 GTPRRHLLTTGWSKFVNSKKLIAGDSVVFMKKAADEMFMGVRRTPISSSGGGSSYYGGDE 236
Query: 176 --------CLARQQSSMPSSVI---SSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQ 222
+A++ + + A + A F V Y P S+
Sbjct: 237 YNGYYSQSSVAKEDDGSAKKTFRRSGKGKLTAEAVTEAINRAAKGLPFEVAYYPTAGWSE 296
Query: 223 FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSPHWKDSKWRSLK 281
F++ +++ + G R KM E EDS F G V + W+ S W+ L+
Sbjct: 297 FVVRAEDVESSMSVFWTPGTRVKMAMETEDSSRITWFQGIVSSTYQETGPWRGSPWKQLQ 356
Query: 282 VQWDEPASITRPDRVSPWEIEPFVASAT 309
+ WDEP + RV+PW++E VA+AT
Sbjct: 357 ITWDEPEILQNVKRVNPWQVE-IVANAT 383
>gi|357489255|ref|XP_003614915.1| Auxin response factor [Medicago truncatula]
gi|355516250|gb|AES97873.1| Auxin response factor [Medicago truncatula]
Length = 521
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/329 (32%), Positives = 167/329 (50%), Gaps = 41/329 (12%)
Query: 27 CRVVNIHLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDT 85
C + + L+A+ TDEV+A++ L P Q P D D K SF K LT SD+
Sbjct: 63 CIITAVDLLADPHTDEVFAKLLLSPVTEGQEFPEVVDE--EDDGGDKFVSFVKTLTKSDS 120
Query: 86 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 145
+ GGFSV R A P LD+N P+Q+L D+H W+F H++RG+P+RHL TTGW
Sbjct: 121 NNGGGFSVPRICADLIFPKLDLNSPFPSQQLSVTDVHDRVWKFAHVYRGRPKRHLFTTGW 180
Query: 146 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVIS--------------- 190
+ FV +K+LVAGD+ VF++ G++ VG+R + ++ +V +
Sbjct: 181 TPFVNTKKLVAGDSIVFMKNTAGDIVVGIRRNIKFAAAETKAVNNKKEEGKENGLEVKRE 240
Query: 191 --SQSMHLGVLATASHAVATQ-----TMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVG 241
S+ G+L + A + F V Y PR + F++ N +A+ +A G
Sbjct: 241 GFSRGGRRGMLTEKAVIEAVELAEKNLAFEVIYYPRANWCNFVVDANVVDDAMKIGWASG 300
Query: 242 MRYKMRFEGEDSPERRFS-----GTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRV 296
MR K+ + ++S + + GT+ V WR L+V WDE + +RV
Sbjct: 301 MRVKLPLKIDESSNSKMTFFQPQGTISNVSSV------PNWRMLQVNWDELEILQNQNRV 354
Query: 297 SPWEIEPFVASATPNLVQPVLAKNKRPRL 325
+PW++E + S TP + P L+ K+PRL
Sbjct: 355 NPWQVE--LISHTPAVHLPFLS-TKKPRL 380
>gi|12323297|gb|AAG51629.1|AC012193_11 putative auxin response factor; 79762-82020 [Arabidopsis thaliana]
Length = 596
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 104/323 (32%), Positives = 151/323 (46%), Gaps = 49/323 (15%)
Query: 23 SKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPR-----------P 71
S + C + +I L+A+ TDEV+A + L P Q P + R
Sbjct: 61 SPVPCIITSIQLLADPVTDEVFAHLILQPMTQQQF------TPTNYSRFGRFDGDVDDNN 114
Query: 72 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 131
KV +F+K+LT SD + GGFSV R A P L+ P Q+L D+HG W F+HI
Sbjct: 115 KVTTFAKILTPSDANNGGGFSVPRFCADSVFPLLNFQIDPPVQKLYVTDIHGAVWDFRHI 174
Query: 132 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR---------------- 175
+RG PRRHLLTTGWS FV SK+L+AGD+ VF+R E+ +GVR
Sbjct: 175 YRGTPRRHLLTTGWSKFVNSKKLIAGDSVVFMRKSADEMFIGVRRTPISSSDGGSSYYGG 234
Query: 176 ----------CLARQQSSMPSSVISSQSMHLGVLATASHAV--ATQTM-FVVYYKPRT-- 220
+A++ P + A+ A+Q + F V + P
Sbjct: 235 DEYNGYYSQSSVAKEDDGSPKKTFRRSGNGKLTAEAVTDAINRASQGLPFEVVFYPAAGW 294
Query: 221 SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSPHWKDSKWRS 279
S+F++ +++ + G R KM E EDS F G V + W+ S W+
Sbjct: 295 SEFVVRAEDVESSMSMYWTPGTRVKMAMETEDSSRITWFQGIVSSTYQETGPWRGSPWKQ 354
Query: 280 LKVQWDEPASITRPDRVSPWEIE 302
L++ WDEP + RV+PW++E
Sbjct: 355 LQITWDEPEILQNVKRVNPWQVE 377
>gi|18411720|ref|NP_565161.1| auxin response factor 17 [Arabidopsis thaliana]
gi|46576532|sp|Q84WU6.1|ARFQ_ARATH RecName: Full=Auxin response factor 17
gi|27754249|gb|AAO22578.1| auxin response factor ARF17 [Arabidopsis thaliana]
gi|332197913|gb|AEE36034.1| auxin response factor 17 [Arabidopsis thaliana]
Length = 585
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 104/323 (32%), Positives = 151/323 (46%), Gaps = 49/323 (15%)
Query: 23 SKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPR-----------P 71
S + C + +I L+A+ TDEV+A + L P Q P + R
Sbjct: 61 SPVPCIITSIQLLADPVTDEVFAHLILQPMTQQQF------TPTNYSRFGRFDGDVDDNN 114
Query: 72 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 131
KV +F+K+LT SD + GGFSV R A P L+ P Q+L D+HG W F+HI
Sbjct: 115 KVTTFAKILTPSDANNGGGFSVPRFCADSVFPLLNFQIDPPVQKLYVTDIHGAVWDFRHI 174
Query: 132 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR---------------- 175
+RG PRRHLLTTGWS FV SK+L+AGD+ VF+R E+ +GVR
Sbjct: 175 YRGTPRRHLLTTGWSKFVNSKKLIAGDSVVFMRKSADEMFIGVRRTPISSSDGGSSYYGG 234
Query: 176 ----------CLARQQSSMPSSVISSQSMHLGVLATASHAV--ATQTM-FVVYYKPRT-- 220
+A++ P + A+ A+Q + F V + P
Sbjct: 235 DEYNGYYSQSSVAKEDDGSPKKTFRRSGNGKLTAEAVTDAINRASQGLPFEVVFYPAAGW 294
Query: 221 SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSPHWKDSKWRS 279
S+F++ +++ + G R KM E EDS F G V + W+ S W+
Sbjct: 295 SEFVVRAEDVESSMSMYWTPGTRVKMAMETEDSSRITWFQGIVSSTYQETGPWRGSPWKQ 354
Query: 280 LKVQWDEPASITRPDRVSPWEIE 302
L++ WDEP + RV+PW++E
Sbjct: 355 LQITWDEPEILQNVKRVNPWQVE 377
>gi|15810291|gb|AAL07033.1| auxin response factor ARF17 [Arabidopsis thaliana]
Length = 585
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 106/319 (33%), Positives = 153/319 (47%), Gaps = 41/319 (12%)
Query: 23 SKILCRVVNIHLMAEQETDEVYAQITLLPEPSQN-EPTTP------DPCPADSPRPKVHS 75
S + C + +I L+A+ TDEV+A + L P Q PT D D+ KV +
Sbjct: 61 SPVPCIITSIQLLADPVTDEVFAHLILQPMTQQQFTPTNYSQFGRFDGDVDDNN--KVTT 118
Query: 76 FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQ 135
F+K+LT SD + GGFSV R A P L+ P Q+L D+HG W F+HI+RG
Sbjct: 119 FAKILTPSDANNGGGFSVPRFCADSVFPLLNFQIDPPVQKLYVTDIHGAVWDFRHIYRGT 178
Query: 136 PRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR-------------------- 175
PRRHLLTTGWS FV SK+L+AGD+ VF+R E+ +GVR
Sbjct: 179 PRRHLLTTGWSKFVNSKKLIAGDSVVFMRKSADEMFIGVRRTPISSSDGGSSYYGGDEYN 238
Query: 176 ------CLARQQSSMPSSVISSQSMHLGVLATASHAV--ATQTM-FVVYYKPRT--SQFI 224
+A++ P + A+ A+Q + F V + P S+F+
Sbjct: 239 GYYSQSSVAKEDDGSPKKTFRRSGNGKLTAEAVTDAINRASQGLPFEVVFYPAAGWSEFV 298
Query: 225 ISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSPHWKDSKWRSLKVQ 283
+ +++ + G R KM E EDS F G V + W+ S W+ L++
Sbjct: 299 VRAEDVESSMSMYWTPGTRVKMAMETEDSSRITWFQGIVSSTYQETGPWRGSPWKQLQIT 358
Query: 284 WDEPASITRPDRVSPWEIE 302
WDEP + RV+PW++E
Sbjct: 359 WDEPEILQNVKRVNPWQVE 377
>gi|302797807|ref|XP_002980664.1| hypothetical protein SELMODRAFT_444549 [Selaginella moellendorffii]
gi|300151670|gb|EFJ18315.1| hypothetical protein SELMODRAFT_444549 [Selaginella moellendorffii]
Length = 793
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/151 (52%), Positives = 101/151 (66%), Gaps = 1/151 (0%)
Query: 25 ILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASD 84
+ CRV+++ +A++ETDEV+A + L PE +E P+ SP K SF+K LT SD
Sbjct: 87 VPCRVLSVKFLADKETDEVFASLRLHPESGSDEDNDRAAAPSPSPE-KPASFAKTLTQSD 145
Query: 85 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 144
+ GGFSV R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLTTG
Sbjct: 146 ANNGGGFSVPRYCAETIFPRLDYSVDPPVQTVLAKDVHGEVWKFRHIYRGTPRRHLLTTG 205
Query: 145 WSTFVTSKRLVAGDTFVFLRGENGELHVGVR 175
WSTFV K+LVAGD VFLR +GEL VGVR
Sbjct: 206 WSTFVNHKKLVAGDAIVFLRSNSGELCVGVR 236
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 70/141 (49%), Gaps = 21/141 (14%)
Query: 198 VLATASHAVATQTMFVVYY-KPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPE- 255
VL A+ A + + VVYY + T++F + A+++ + GMR+KM FE EDS
Sbjct: 311 VLDAATLAASGKAFEVVYYPRASTAEFCVRAQTVRAALSHGWYAGMRFKMAFETEDSSRI 370
Query: 256 RRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQ 314
F GT+ V+ P W S WR L+V WDEP + RVSPW++E + S P
Sbjct: 371 SWFMGTISAVQAADPILWPSSPWRVLQVAWDEPDLLQGVSRVSPWQVE--LVSTLP---- 424
Query: 315 PVLAKNKRPRLSMEVPPLDLP 335
M++PP LP
Sbjct: 425 ------------MQLPPFSLP 433
Score = 42.4 bits (98), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 3/105 (2%)
Query: 493 ADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTL 552
DS D+ KKQ V S K+ + + S S+ +V M+ V R LDL++
Sbjct: 632 GDSGHGGDVGGSKWLKKQASVLSSEKKDRLEGSSSDEESSQCRVFMESGDVKRTLDLSSF 691
Query: 553 VGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPW 597
YD L +L +F + + +VY D EG + G +P+
Sbjct: 692 GSYDELYKQLAAVFCVD---VAKISGRVVYKDSEGSTIHTGGEPY 733
>gi|218190030|gb|EEC72457.1| hypothetical protein OsI_05804 [Oryza sativa Indica Group]
Length = 1067
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/176 (45%), Positives = 116/176 (65%), Gaps = 4/176 (2%)
Query: 4 LEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQN-EPTTP 61
+ AS ++++ +P + LPSK++C + ++L A+ +TDEVYAQ+TL P + E
Sbjct: 80 VAASMQKDVDAHVPSYPNLPSKLICLLHGVNLHADPDTDEVYAQMTLQPVNTYGKEALQL 139
Query: 62 DPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDL 121
RP++ F K LTASDTSTHGGFSV R+ A + PPLD + P QEL A+D+
Sbjct: 140 SELALKQARPQMEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDI 199
Query: 122 HGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLR--GENGELHVGVR 175
H W F+HI+RGQP+RHLLTTGWS FV+ KRL AGD+ + +R ++ ++ +G+R
Sbjct: 200 HDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVIVVRRHCDSNQISLGMR 255
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 113/230 (49%), Gaps = 24/230 (10%)
Query: 397 PRVKFSQ-QLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCR 455
P F+Q Q+F++A+ D + P++S NND LL +TE
Sbjct: 811 PSSNFNQHQMFKDALPDVEMEGVDPSNSCLF-----GINNDNLLG---FPIETEDLLINA 862
Query: 456 LFGIELINHATSSA----PSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQE 511
L ++ NH ++ P +K + ++T S + S G+SD+A +
Sbjct: 863 LDSVKYQNHISTDVENNYPMQKDALQEIST--------SMVSQSFGQSDMAFNSIDSAIN 914
Query: 512 QVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQ 571
K S L R+ TKV +G AVGR++D+ GY+ L L MF I+GQ
Sbjct: 915 DGAFLNKNSWPAAPLLQRMRTFTKVYKRG-AVGRSIDIGRYSGYEELKHALARMFGIEGQ 973
Query: 572 LHTRTK--WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
L R + W++VY D E D++L+GDDPW EF N V+ I I S Q+V++MS
Sbjct: 974 LEDRQRIGWKLVYKDHEDDILLLGDDPWEEFVNCVRCIRILSPQEVQQMS 1023
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 61/115 (53%), Gaps = 15/115 (13%)
Query: 210 TMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFS 269
++FV + +I + ++ ++ N+ ++GMR++M FE E+ RR+ GT+ G+ D
Sbjct: 224 SLFVSGKRLFAGDSVIVVRRHCDS--NQISLGMRFRMMFETEELGTRRYMGTITGISDLD 281
Query: 270 PHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 324
P V WDE A+ R +RVS WEIEP VA+ QP KRPR
Sbjct: 282 P-----------VGWDESAAGERRNRVSIWEIEP-VAAPFFLCPQPFFGV-KRPR 323
>gi|442751169|gb|JAA67744.1| Putative auxin response factor [Ixodes ricinus]
Length = 155
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 75/96 (78%), Positives = 82/96 (85%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
MEQLEASTNQELNQRIP+F LP KILCRV NI L+AEQ+TDEVYAQITL+PE Q EP +
Sbjct: 58 MEQLEASTNQELNQRIPMFNLPPKILCRVFNIQLLAEQDTDEVYAQITLMPEADQTEPIS 117
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRK 96
PD CP + P+P VHSF KVLTASDTSTHG FSVLRK
Sbjct: 118 PDSCPEEPPKPDVHSFCKVLTASDTSTHGEFSVLRK 153
>gi|302790307|ref|XP_002976921.1| hypothetical protein SELMODRAFT_443304 [Selaginella moellendorffii]
gi|300155399|gb|EFJ22031.1| hypothetical protein SELMODRAFT_443304 [Selaginella moellendorffii]
Length = 752
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 81/152 (53%), Positives = 102/152 (67%), Gaps = 3/152 (1%)
Query: 25 ILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRP-KVHSFSKVLTAS 83
+ CRV+++ +A++ETDEV+A + L PE +E D A SP P K SF+K LT S
Sbjct: 87 VPCRVLSVKFLADKETDEVFASLRLHPESGSDEDN--DRAAALSPSPEKPASFAKTLTQS 144
Query: 84 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 143
D + GGFSV R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLTT
Sbjct: 145 DANNGGGFSVPRYCAETIFPRLDYSVDPPVQTVLAKDVHGEVWKFRHIYRGTPRRHLLTT 204
Query: 144 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVR 175
GWSTFV K+LVAGD VFLR +GEL VGVR
Sbjct: 205 GWSTFVNHKKLVAGDAIVFLRSNSGELCVGVR 236
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 70/141 (49%), Gaps = 21/141 (14%)
Query: 198 VLATASHAVATQTMFVVYY-KPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPER 256
VL A+ A + + VVYY + T++F + A+++ + GMR+KM FE EDS
Sbjct: 311 VLDAATLAASGKAFEVVYYPRASTAEFCVRAQTVRAALSHGWYAGMRFKMAFETEDSSRI 370
Query: 257 R-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQ 314
F GT+ V+ P W S WR L+V WDEP + RVSPW++E LV
Sbjct: 371 SWFMGTISAVQAADPILWPSSPWRVLQVAWDEPDLLQGVSRVSPWQVE---------LVS 421
Query: 315 PVLAKNKRPRLSMEVPPLDLP 335
L M++PP LP
Sbjct: 422 ---------TLPMQLPPFSLP 433
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 4/123 (3%)
Query: 493 ADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTL 552
+S D+ KKQ V K+ + + S S+ +V M+ V R LDL++
Sbjct: 632 GESGHGGDVGGSKWLKKQASVLSWEKKDRLEGSSSDEESSQCRVFMESGDVKRTLDLSSF 691
Query: 553 VGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICS- 611
YD L +L +F + + +VY D EG + G +P+ F V+R+ I +
Sbjct: 692 GSYDELYKQLATVFCVD---MAKISGRVVYKDSEGSTIHTGGEPYANFVKSVRRLTILAD 748
Query: 612 SQD 614
+QD
Sbjct: 749 TQD 751
>gi|297746266|emb|CBI16322.3| unnamed protein product [Vitis vinifera]
Length = 546
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 85/193 (44%), Positives = 114/193 (59%), Gaps = 4/193 (2%)
Query: 114 QELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVG 173
+ ++AKD+HG W+F+HI+RG PRRHLLTTGWSTFV K+LVAGD+ VFLR ENG+L VG
Sbjct: 74 ETVIAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAENGDLCVG 133
Query: 174 VRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYL 231
+R R + + + + + A+ A F V Y PR S +F + +
Sbjct: 134 IRRAKRGIAGSGGGLRGGRRVRPESVVEAATLAANGQPFEVVYYPRASTPEFCVKASGVR 193
Query: 232 EAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPAS 289
AV ++ GMR+KM FE EDS F GT+ V+ P W +S WR L+V WDEP
Sbjct: 194 SAVRIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVADPIRWPNSPWRLLQVTWDEPDL 253
Query: 290 ITRPDRVSPWEIE 302
+ RVSPW +E
Sbjct: 254 LQNVKRVSPWLVE 266
>gi|304308125|gb|ADL70375.1| auxin response factor 9 [Arabidopsis thaliana]
Length = 230
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 115/285 (40%), Positives = 159/285 (55%), Gaps = 62/285 (21%)
Query: 258 FSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVL 317
+SGTV+GV+D SPHWKDSKWR L+V WDEPASI+RP++VSPWEIEPFV+S N+ + V+
Sbjct: 1 YSGTVIGVKDCSPHWKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVSSE--NIPKSVM 58
Query: 318 AKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDF 377
KNKRPR EV LD+ AS WS+ L Q H Q +T++
Sbjct: 59 LKNKRPRPVSEVSALDVGITASNLWSSVLTQPHEFAQSCITSQ----------------- 101
Query: 378 SSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPN--N 435
+SP QQ ++A +D K S W ++ +S + +K + N
Sbjct: 102 ----------------WSSP-----QQCHRDANEDAKK-SDW-LNNSYSVSNVAKDSTLN 138
Query: 436 DTLLEQVETGRKTETGTSCRLFGIELINHATS-----SAPSEKVPVSSLTTEGHIISTIS 490
D ++ VE +K ET + RLFGI+L++ + + +AP + +S T + H
Sbjct: 139 DQMVSPVEQ-KKPETTANYRLFGIDLMSSSLAVPEEKTAPMRPINISKPTMDSH------ 191
Query: 491 AAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTK 535
SD KS+I+K +EKKQE + SPKE QSKQS +S RSRTK
Sbjct: 192 ----SDPKSEISKVSEEKKQEPAEGSPKEVQSKQS--SSTRSRTK 230
>gi|110739728|dbj|BAF01771.1| auxin response factor-like protein [Arabidopsis thaliana]
Length = 194
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 86/175 (49%), Positives = 108/175 (61%), Gaps = 28/175 (16%)
Query: 450 TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKK 509
T S RLFG +L +++ + P +K P + T AA K
Sbjct: 28 TNCSYRLFGFDLTSNSPAPIPQDKQP----------MDTCGAA---------------KC 62
Query: 510 QEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK 569
QE + + Q KQ ++RSRTKVQMQG+AVGRA+DLT L YD LIDELEEMF+I+
Sbjct: 63 QEPITPTSMSEQKKQQ---TSRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQ 119
Query: 570 GQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 624
GQL R KW +V+TDDEGDMML GDDPW+EFC M K+IFI SS +VKKM+ K+
Sbjct: 120 GQLLARDKWIVVFTDDEGDMMLAGDDPWNEFCKMAKKIFIYSSDEVKKMTTKLKI 174
>gi|284811249|gb|ADB96363.1| auxin response factor 9 [Arabidopsis thaliana]
gi|284811251|gb|ADB96364.1| auxin response factor 9 [Arabidopsis thaliana]
gi|284811253|gb|ADB96365.1| auxin response factor 9 [Arabidopsis thaliana]
gi|284811257|gb|ADB96367.1| auxin response factor 9 [Arabidopsis thaliana]
gi|304308107|gb|ADL70366.1| auxin response factor 9 [Arabidopsis thaliana]
gi|304308111|gb|ADL70368.1| auxin response factor 9 [Arabidopsis thaliana]
gi|304308113|gb|ADL70369.1| auxin response factor 9 [Arabidopsis thaliana]
gi|304308115|gb|ADL70370.1| auxin response factor 9 [Arabidopsis thaliana]
gi|304308117|gb|ADL70371.1| auxin response factor 9 [Arabidopsis thaliana]
gi|304308119|gb|ADL70372.1| auxin response factor 9 [Arabidopsis thaliana]
gi|304308121|gb|ADL70373.1| auxin response factor 9 [Arabidopsis thaliana]
gi|304308123|gb|ADL70374.1| auxin response factor 9 [Arabidopsis thaliana]
gi|304308129|gb|ADL70377.1| auxin response factor 9 [Arabidopsis thaliana]
Length = 230
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 115/285 (40%), Positives = 158/285 (55%), Gaps = 62/285 (21%)
Query: 258 FSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVL 317
+SGTV+GV+D SPHWKDSKWR L+V WDEPASI+RP++VSPWEIEPFV S N+ + V+
Sbjct: 1 YSGTVIGVKDCSPHWKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVNSE--NVPKSVM 58
Query: 318 AKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDF 377
KNKRPR EV LD+ AS WS+ L Q H Q +T++
Sbjct: 59 LKNKRPRQVSEVSALDVGITASNLWSSVLTQPHEFAQSCITSQ----------------- 101
Query: 378 SSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPN--N 435
+SP QQ ++A +D K S W ++ +S + +K + N
Sbjct: 102 ----------------WSSP-----QQCHRDANEDAKK-SDW-LNNSYSVSNVAKDSTLN 138
Query: 436 DTLLEQVETGRKTETGTSCRLFGIELINHATS-----SAPSEKVPVSSLTTEGHIISTIS 490
D ++ VE +K ET + RLFGI+L++ + + +AP + +S T + H
Sbjct: 139 DQMVSPVEQ-KKPETTANYRLFGIDLMSSSLAVPEEKTAPMRPINISKPTMDSH------ 191
Query: 491 AAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTK 535
SD KS+I+K +EKKQE + SPKE QSKQS +S RSRTK
Sbjct: 192 ----SDPKSEISKVSEEKKQEPAEGSPKEVQSKQS--SSTRSRTK 230
>gi|449456014|ref|XP_004145745.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
gi|449531181|ref|XP_004172566.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
Length = 716
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/161 (47%), Positives = 104/161 (64%), Gaps = 4/161 (2%)
Query: 19 FRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQN----EPTTPDPCPADSPRPKVH 74
R+P I CRV+ + +A+ ETDEV+A + ++P P+ + E +++ K
Sbjct: 51 LRIPPLIPCRVLAVKFLADLETDEVFANVRMVPLPNSDLNFEEEGGFGSSGSENNMEKPA 110
Query: 75 SFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG 134
SF+K LT SD + GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG
Sbjct: 111 SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVIAKDVHGEVWKFRHIYRG 170
Query: 135 QPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR 175
PRRHLLTTGWSTFV K+LVAGD+ VFLR +NG+L VG+R
Sbjct: 171 TPRRHLLTTGWSTFVNQKKLVAGDSIVFLRSKNGDLCVGIR 211
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 113/448 (25%), Positives = 194/448 (43%), Gaps = 62/448 (13%)
Query: 198 VLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPE 255
V+ A+ A + Q VVYY PR S +F + + A+ ++ GMR+KM FE EDS
Sbjct: 278 VMEAAALAASGQPFEVVYY-PRASTPEFCVKASSVRAAMRIQWCSGMRFKMPFETEDSSR 336
Query: 256 RR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLV 313
F GT+ V+ P W +S WR L+V WDEP + RVSPW +E + S P ++
Sbjct: 337 ISWFMGTISSVQVADPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE--LVSNMP-VI 393
Query: 314 QPVLAKNKRPRLSMEVPP-LDLPSAASAPWSARLAQSHNL---TQLSVTAEDKRIDNHVA 369
Q L+ PR +P D P + P S+ + S+ L + + +++ + A
Sbjct: 394 Q--LSPFSPPRKKFRLPQHPDFPLDSQFPLSSSFS-SNTLRPSSPMCCLSDNTSVGIQGA 450
Query: 370 WHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPH 429
H + S+ + ++ Q + ++ F ++ ++ D+++ S+
Sbjct: 451 RHTQFGISLSDFHLNNKLQLGLVPSSFQQIDFHSRISNRSVTDHRDSSS----------- 499
Query: 430 PSKPNNDTLLEQVE-TGRKTETGTSCR-----LFGIELINH---ATSSAPSEKVPVSSLT 480
+N ++L+ E TG K E S + LFG ++ SS+ + P + +
Sbjct: 500 ----HNSSVLQNGEKTGPKLERSDSVKKHQFLLFGQPILTEQQITCSSSSDIRSPPTEKS 555
Query: 481 TEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKES--------QSKQSC-LTSNR 531
+ + + + G + FK+ QVSP +S Q Q+ L +
Sbjct: 556 SSDVNLERVKFLSHGSGST-----FKQ------QVSPNKSPGVGFPWYQGYQATELGLDI 604
Query: 532 SRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMML 591
KV M+ VGR L+L+ + Y+ L L MF G ++Y D G +
Sbjct: 605 GHCKVFMESEDVGRTLNLSVISSYEELYRRLANMF---GMEKPDILSHVLYQDATGAVKQ 661
Query: 592 VGDDPWHEFCNMVKRIFICSSQDVKKMS 619
GD P+ +F +R+ I + K+
Sbjct: 662 AGDKPFSDFIKTARRLTILTDSGSDKLG 689
>gi|304308109|gb|ADL70367.1| auxin response factor 9 [Arabidopsis thaliana]
Length = 230
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/285 (40%), Positives = 158/285 (55%), Gaps = 62/285 (21%)
Query: 258 FSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVL 317
+SGTV+GV+D SPHWKDSKWR L+V WDEPA+I+RP++VSPWEIEPFV S N+ + V+
Sbjct: 1 YSGTVIGVKDCSPHWKDSKWRCLEVHWDEPATISRPNKVSPWEIEPFVNSE--NVPKSVM 58
Query: 318 AKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDF 377
KNKRPR EV LD+ AS WS+ L Q H Q +T++
Sbjct: 59 LKNKRPRQVSEVSALDVGITASNLWSSVLTQPHEFAQSCITSQ----------------- 101
Query: 378 SSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPN--N 435
+SP QQ ++A +D K S W ++ +S + +K + N
Sbjct: 102 ----------------WSSP-----QQCHRDANEDAKK-SDW-LNNSYSVSNVAKDSTLN 138
Query: 436 DTLLEQVETGRKTETGTSCRLFGIELINHATS-----SAPSEKVPVSSLTTEGHIISTIS 490
D ++ VE +K ET + RLFGI+L++ + + +AP + +S T + H
Sbjct: 139 DQMVSPVEQ-KKPETTANYRLFGIDLMSSSLAVPEEKTAPMRPINISKPTMDSH------ 191
Query: 491 AAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTK 535
SD KS+I+K +EKKQE + SPKE QSKQS +S RSRTK
Sbjct: 192 ----SDPKSEISKVSEEKKQEPAEGSPKEVQSKQS--SSTRSRTK 230
>gi|6573757|gb|AAF17677.1|AC009243_4 F28K19.6 [Arabidopsis thaliana]
Length = 652
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/330 (31%), Positives = 151/330 (45%), Gaps = 56/330 (16%)
Query: 23 SKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPR-----------P 71
S + C + +I L+A+ TDEV+A + L P Q P + R
Sbjct: 58 SPVPCIITSIQLLADPVTDEVFAHLILQPMTQQQF------TPTNYSRFGRFDGDVDDNN 111
Query: 72 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 131
KV +F+K+LT SD + GGFSV R A P L+ P Q+L D+HG W F+HI
Sbjct: 112 KVTTFAKILTPSDANNGGGFSVPRFCADSVFPLLNFQIDPPVQKLYVTDIHGAVWDFRHI 171
Query: 132 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR---------------- 175
+RG PRRHLLTTGWS FV SK+L+AGD+ VF+R E+ +GVR
Sbjct: 172 YRGTPRRHLLTTGWSKFVNSKKLIAGDSVVFMRKSADEMFIGVRRTPISSSDGGSSYYGG 231
Query: 176 ----------CLARQQSSMPSSVISSQSMHLGVLATASHAV--ATQTM-FVVYYKPRT-- 220
+A++ P + A+ A+Q + F V + P
Sbjct: 232 DEYNGYYSQSSVAKEDDGSPKKTFRRSGNGKLTAEAVTDAINRASQGLPFEVVFYPAAGW 291
Query: 221 SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSPHWKDSKWRS 279
S+F++ +++ + G R KM E EDS F G V + W+ S W+
Sbjct: 292 SEFVVRAEDVESSMSMYWTPGTRVKMAMETEDSSRITWFQGIVSSTYQETGPWRGSPWKQ 351
Query: 280 LKVQ-------WDEPASITRPDRVSPWEIE 302
L+V WDEP + RV+PW++E
Sbjct: 352 LQVYDVFEMITWDEPEILQNVKRVNPWQVE 381
>gi|284811255|gb|ADB96366.1| auxin response factor 9 [Arabidopsis thaliana]
Length = 230
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 114/285 (40%), Positives = 158/285 (55%), Gaps = 62/285 (21%)
Query: 258 FSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVL 317
+SGTV+GV+D SPHWKDSKWR L+V WDEPASI+RP++VSPWE EPFV+S N+ + V+
Sbjct: 1 YSGTVIGVKDCSPHWKDSKWRCLEVHWDEPASISRPNKVSPWETEPFVSSE--NIPKSVM 58
Query: 318 AKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDF 377
KNKRPR EV LD+ AS WS+ L Q H Q +T++
Sbjct: 59 LKNKRPRPVSEVSALDVGITASNLWSSVLTQPHEFAQSCITSQ----------------- 101
Query: 378 SSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPN--N 435
+SP QQ ++A +D K S W ++ +S + +K + N
Sbjct: 102 ----------------WSSP-----QQCHRDANEDAKK-SDW-LNNSYSVSNVAKDSTLN 138
Query: 436 DTLLEQVETGRKTETGTSCRLFGIELINHATS-----SAPSEKVPVSSLTTEGHIISTIS 490
D ++ VE +K ET + RLFGI+L++ + + +AP + +S T + H
Sbjct: 139 DQMVSPVEQ-KKPETTANYRLFGIDLMSSSLAVPEEKTAPMRPINISKPTMDSH------ 191
Query: 491 AAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTK 535
SD KS+I+K +EKKQE + SPKE QSKQS +S RSRTK
Sbjct: 192 ----SDPKSEISKVSEEKKQEPAEGSPKEVQSKQS--SSTRSRTK 230
>gi|379323228|gb|AFD01313.1| auxin response factor 17-1 [Brassica rapa subsp. pekinensis]
Length = 546
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/306 (34%), Positives = 149/306 (48%), Gaps = 23/306 (7%)
Query: 16 IPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLP-EPSQNEPTT--------PDPCPA 66
I F + + C V + L+A+ TDEV+A + L P P P+ D +
Sbjct: 54 ISSFSTAAPVPCVVSAVELLADPITDEVFAHLALQPISPEHFSPSNFSGFGSDDDDDNNS 113
Query: 67 DSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEW 126
+S + KV +F+K+LT SD + GGFSV R A PPLD + P Q+L D+HG W
Sbjct: 114 NSNKNKVVTFAKILTPSDANNGGGFSVPRYCADSVFPPLDFHADPPVQKLFITDIHGVVW 173
Query: 127 RFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR---CLARQQSS 183
F+HI+RG PRRHLLTTGWS FV K+L+AGD+ VF+R E+ +GVR
Sbjct: 174 DFRHIYRGTPRRHLLTTGWSKFVNGKKLIAGDSVVFMRKSVDEMFIGVRRAPISNHGDEY 233
Query: 184 MPSSVISSQSMHLGVLA------TASHAVATQTMFVVYYKPRT-SQFIISLNKYLEAVNN 236
+ + +G L + AV VVYY S F++ +
Sbjct: 234 YGGGKKGFRRIGMGKLTAEAVSEAVNKAVQGYPFEVVYYPTAGWSDFVVRAEDVEVFMAG 293
Query: 237 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRV 296
++ G R KM E EDS + VV S + W+ L++ WDEP + RV
Sbjct: 294 YWSPGTRVKMAMETEDSSRVTWFQGVVS----STFQETGLWKQLQITWDEPEILQNLKRV 349
Query: 297 SPWEIE 302
+PW++E
Sbjct: 350 NPWQVE 355
>gi|304308105|gb|ADL70365.1| auxin response factor 9 [Arabidopsis thaliana]
gi|304308127|gb|ADL70376.1| auxin response factor 9 [Arabidopsis thaliana]
Length = 230
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 114/285 (40%), Positives = 157/285 (55%), Gaps = 62/285 (21%)
Query: 258 FSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVL 317
+SGTV+GV+D SPHWKDSKWR L+V WDEPAS +RP++VSPWEIEPFV S N+ + V+
Sbjct: 1 YSGTVIGVKDCSPHWKDSKWRCLEVHWDEPASTSRPNKVSPWEIEPFVNSE--NVPKSVM 58
Query: 318 AKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDF 377
KNKRPR EV LD+ AS WS+ L Q H Q +T++
Sbjct: 59 LKNKRPRQVSEVSALDVGITASNLWSSVLTQPHEFAQSCITSQ----------------- 101
Query: 378 SSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPN--N 435
+SP QQ ++A +D K S W ++ +S + +K + N
Sbjct: 102 ----------------WSSP-----QQCHRDANEDAKK-SDW-LNNSYSVSNVAKDSTLN 138
Query: 436 DTLLEQVETGRKTETGTSCRLFGIELINHATS-----SAPSEKVPVSSLTTEGHIISTIS 490
D ++ VE +K ET + RLFGI+L++ + + +AP + +S T + H
Sbjct: 139 DQMVSPVEQ-KKPETTANYRLFGIDLMSSSLAVPEEKTAPMRPINISKPTMDSH------ 191
Query: 491 AAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTK 535
SD KS+I+K +EKKQE + SPKE QSKQS +S RSRTK
Sbjct: 192 ----SDPKSEISKVSEEKKQEPAEGSPKEVQSKQS--SSTRSRTK 230
>gi|242073716|ref|XP_002446794.1| hypothetical protein SORBIDRAFT_06g022810 [Sorghum bicolor]
gi|241937977|gb|EES11122.1| hypothetical protein SORBIDRAFT_06g022810 [Sorghum bicolor]
Length = 695
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 113/320 (35%), Positives = 152/320 (47%), Gaps = 46/320 (14%)
Query: 19 FRLPSKILCRVVNIHLMAEQETDEVYAQITLLP----EPSQNEPTTPDPCPADSPR---- 70
R+P + CRV + LMA+ +TD+VYA+I L+P EP + S R
Sbjct: 88 LRVPPFVPCRVAAVRLMADPDTDDVYARIRLVPLRAWEPVADVGDAALVKTDGSSRGGAD 147
Query: 71 --------------PKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQEL 116
P+ SF+K LT SD + GGFSV R A P LD + S P Q +
Sbjct: 148 GDGDGDAGGGQQQQPRPLSFAKTLTPSDANNGGGFSVPRFCALSIFPELDYSFSPPVQFV 207
Query: 117 VAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRC 176
A+D+HG EW F+HI+R PRR LL G +KR VF R G + GV
Sbjct: 208 SARDVHGVEWTFRHIYRSTPRRTLLNPG-CRLRRAKR-------VFCRRGGGGSNAGVAV 259
Query: 177 LARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAV 234
+P+ V+ A A A Q VV+Y PR S +F++ E++
Sbjct: 260 AGPSDGKVPAE---------DVVEAARLAAAGQPFEVVHY-PRASAPEFVVRAAAVKESM 309
Query: 235 NNKFAVGMRYKMRFEGED-SPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITR 292
+ G+R+KM FE ED S F GT+ GVE P W S WR L+V WDEP +
Sbjct: 310 QAPWCPGLRFKMAFETEDLSRISWFMGTIAGVEPADPARWPQSPWRLLQVTWDEPELLRN 369
Query: 293 PDRVSPWEIEPFVASATPNL 312
+RV PW +E + S+ P L
Sbjct: 370 VNRVCPWRVE--LVSSMPKL 387
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 51/120 (42%), Gaps = 4/120 (3%)
Query: 490 SAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDL 549
S+ +D G SD++ KK S S + KV ++ +GR LDL
Sbjct: 569 SSTSDRSG-SDVSHGSPAKKNSPSLTLWWSGDSSLSAFALEPGQCKVFVESDTLGRNLDL 627
Query: 550 TTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 609
+ L ++ L L F I + + +VY G++ VGD+P+ F +RI I
Sbjct: 628 SALSSFEELCARLSSFFGIN---NADLRSHMVYRTIAGEVKHVGDEPFSVFVKSARRITI 684
>gi|357492607|ref|XP_003616592.1| Auxin response factor [Medicago truncatula]
gi|355517927|gb|AES99550.1| Auxin response factor [Medicago truncatula]
Length = 460
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 100/295 (33%), Positives = 153/295 (51%), Gaps = 18/295 (6%)
Query: 25 ILCRVVNIHLMAEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTA 82
I C V ++ L+A+ +TDEV+A++ L P S +EP P+ + ++ K LT
Sbjct: 61 IPCVVSDVDLLADLQTDEVFAKLILTPITNDSVHEPQEPEVRENEHGGDRLVFSGKTLTQ 120
Query: 83 SDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLT 142
SD + G FSV + A PPLD+ P+Q L KD+H + W F+H +RG P+RHL+T
Sbjct: 121 SDANNGGAFSVPSECAKLIFPPLDLTSPMPSQVLPIKDIHNFVWNFRHTYRGSPKRHLIT 180
Query: 143 TGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATA 202
T WS FV +K+++ GD+ V ++ + + R+ ++ I+ +S V+ A
Sbjct: 181 TKWSKFVDTKKIIGGDSLVLMKISKDKDKDKIFIGIRRHKLSAAAKITEKS----VMEAA 236
Query: 203 SHAVATQTMFVVYYKPRTSQ---FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-- 257
A T V+YY P S F++ +A+ + GMR K + ++S +R
Sbjct: 237 ELADKNMTFEVIYY-PTASHWCNFVVDAEAVKKAMQINWQSGMRVKHCLKTDESSKRSSI 295
Query: 258 FSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL 312
F GTV + D S H WR L+V WDE P +VSPW+IE + S TP L
Sbjct: 296 FQGTVSALSDPSHH----PWRMLQVNWDESEVSQNPSQVSPWQIE--LISHTPAL 344
>gi|226498234|ref|NP_001142397.1| uncharacterized protein LOC100274571 [Zea mays]
gi|194708626|gb|ACF88397.1| unknown [Zea mays]
Length = 543
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/131 (56%), Positives = 100/131 (76%), Gaps = 10/131 (7%)
Query: 211 MFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 268
MF VYYKPRTS +FII ++Y+E+V N +++GMR++MRFEGE++PE+RF+GT+VG E+
Sbjct: 1 MFTVYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQRFTGTIVGCENL 60
Query: 269 SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVL--AKNKRPRLS 326
P W DS WR LKV+WDEP++I RPDRVSPW+IEP AS+ P V P++ ++ KRPR
Sbjct: 61 DPLWPDSSWRYLKVRWDEPSTIPRPDRVSPWKIEP--ASSPP--VNPLVHSSRAKRPR-- 114
Query: 327 MEVPPLDLPSA 337
VPP L S+
Sbjct: 115 QNVPPPSLESS 125
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 116/192 (60%), Gaps = 19/192 (9%)
Query: 447 KTETGTSCRLFGIELINHATSSAPSE-KVPVSSLTTEGHIISTISAAADSD--------- 496
KT G+ ++FG ++ TS +P + P+ ++ + H++ T +A ++
Sbjct: 338 KTREGSGFKIFGFQV--DTTSPSPVQLSSPLPAI--QEHVLQTRPSAPVNELQPVQIECL 393
Query: 497 --GKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVG 554
G A E Q+ Q S K+ QSK S S RS TKV QGVA+GR++DL+
Sbjct: 394 PEGSVSTAGTATENIQQAPQSS-KDIQSK-SQGASTRSCTKVHKQGVALGRSVDLSKFTD 451
Query: 555 YDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQ 613
Y L EL++MFD +G+L + ++ W+IVYTDDEGDMMLVGDDPW EFC++V++I+I + +
Sbjct: 452 YGELQAELDKMFDFEGELVSGSQNWQIVYTDDEGDMMLVGDDPWEEFCSIVRKIYIYTKE 511
Query: 614 DVKKMSPGSKLP 625
+V+KM+ S P
Sbjct: 512 EVQKMNSKSAAP 523
>gi|293333131|ref|NP_001169598.1| uncharacterized protein LOC100383479 [Zea mays]
gi|224030297|gb|ACN34224.1| unknown [Zea mays]
gi|295844284|gb|ADG43139.1| auxin response factor 5 [Zea mays]
gi|407232712|gb|AFT82698.1| ARF5 transcription factor, partial [Zea mays subsp. mays]
gi|414586223|tpg|DAA36794.1| TPA: auxin response factor 5 [Zea mays]
Length = 513
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 107/315 (33%), Positives = 153/315 (48%), Gaps = 37/315 (11%)
Query: 22 PSKILCRVVNIHLMAEQETDEVYAQITLLPEP-------SQNEPTTPDPCPADSPRPKVH 74
P C V + L A+ ET+EV+A+I+L P P + +PT+ D P ++
Sbjct: 62 PHLFPCTVAGVSLGADDETNEVFAKISLSPGPHRGPAAACRTDPTS------DCPPQELS 115
Query: 75 SFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG 134
F+K LT SD + GGFSV R A P LD + + P Q+L +D G W+F+HI+RG
Sbjct: 116 YFTKELTQSDANNGGGFSVPRYCADHIFPTLDFDANPPVQKLFMRDTRGNPWQFRHIYRG 175
Query: 135 QPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMP-----SSVI 189
PRRHLLTTGWS FV +K LVAGD VF+R NG+L VG+R R P + V
Sbjct: 176 TPRRHLLTTGWSRFVNAKLLVAGDIVVFMRRHNGDLIVGLRRTPRYPLVFPRVGSGAGVD 235
Query: 190 SSQSMHLGVLA--------TASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFA 239
Q A A+ A F V Y PR +FI+ ++ + ++
Sbjct: 236 PDQPPPRNARARVPPQDVIEAARLAAEGRSFAVTYFPRQAAGEFIVPRDEVEGVLATRWE 295
Query: 240 VGMRYKMR-FEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDE--PASITRPDRV 296
G + +M+ E ED+ RR V + + WR+L++ WD+ P S V
Sbjct: 296 PGAQVRMQVMEAEDT--RR----TVWADGHVKSLHQNIWRALEIDWDDSSPLSPNLSRFV 349
Query: 297 SPWEIEPFVASATPN 311
+ W++E PN
Sbjct: 350 NAWQVELVTHPPLPN 364
>gi|357162852|ref|XP_003579544.1| PREDICTED: auxin response factor 13-like [Brachypodium distachyon]
Length = 502
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 103/287 (35%), Positives = 145/287 (50%), Gaps = 15/287 (5%)
Query: 22 PSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLT 81
P C V + L A+ TDE +A I+L+P P + P + P ++K LT
Sbjct: 55 PHLFPCTVAAVALSADPSTDEPFATISLVPGPHR---ALGGGAPHHAVDPAFAHYAKQLT 111
Query: 82 ASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL 141
SD + GGFSV R A P LD + P Q L +DL G W F+HI+RG PRRHLL
Sbjct: 112 QSDANNGGGFSVPRFCADSVFPGLDFDADPPVQTLRMRDLLGKLWEFRHIYRGTPRRHLL 171
Query: 142 TTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSM-PSSVISSQSMHLGV-- 198
TTGWS FV +K LVAGD VF+R +GEL GVR R S P+ + +
Sbjct: 172 TTGWSRFVNAKLLVAGDAVVFMRRPDGELLAGVRRTPRYPVSQDPAEPPRNARARVPAQE 231
Query: 199 LATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPER 256
+ A+ A F V Y PR +F++ + +A+ + + G + +M+F PE
Sbjct: 232 VEDAARRAAQGAPFTVTYYPRQGAGEFVVPRKEVEDALISPWEPGTQVRMQFL---HPED 288
Query: 257 RFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDR-VSPWEIE 302
R S + GV H S WR L++ WDE A + +R V+ W+++
Sbjct: 289 RRSEWINGVVRAVDH---SIWRMLEIDWDESAPPSLKNRHVNAWQVQ 332
>gi|326529683|dbj|BAK04788.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 529
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 102/289 (35%), Positives = 145/289 (50%), Gaps = 24/289 (8%)
Query: 27 CRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSF---SKVLTAS 83
C V + L A+ +TDE +A ++L+P P + PD A + RP+ +F +K LT S
Sbjct: 70 CTVAAVRLFADPKTDEPFATVSLVPGPHRA--PAPDLPHASARRPEPTAFRYYAKQLTQS 127
Query: 84 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 143
D + GGFSV R A PPLD P Q L D G W F+HI+RG PRRHLLTT
Sbjct: 128 DANNGGGFSVPRFCAELVFPPLDFEADPPVQRLRMTDPLGKHWDFRHIYRGTPRRHLLTT 187
Query: 144 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR-----QQSSMPSSVISSQSMHLGV 198
GWS FV +K LVAGD VF+R +GEL G+R R QQ + +
Sbjct: 188 GWSKFVNAKLLVAGDAVVFMRRADGELLTGIRRAPRFPAVSQQGPERRPRNARARVPPQE 247
Query: 199 LATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPER 256
+ A A F V Y PR +F++ + EA+ + G++ +M+F D+ ER
Sbjct: 248 VDDAVRLAAEGAPFTVTYYPRQGAGEFVVPKQEVEEALVGAWRPGVQVRMKF--LDAEER 305
Query: 257 R---FSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 302
R +G V V+ + WR L++ W E + + V+ W++E
Sbjct: 306 RSEWINGVVKAVD-------PNIWRMLEINWAESVAGSLNRYVNAWQVE 347
>gi|242077784|ref|XP_002448828.1| hypothetical protein SORBIDRAFT_06g033970 [Sorghum bicolor]
gi|241940011|gb|EES13156.1| hypothetical protein SORBIDRAFT_06g033970 [Sorghum bicolor]
Length = 518
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 109/327 (33%), Positives = 160/327 (48%), Gaps = 40/327 (12%)
Query: 22 PSKILCRVVNIHLMAEQETDEVYAQITLLPEP-----SQNEPTTPDPCP------ADSP- 69
P C V N+ L A+ +T+EV+A+I+L P P + + PDP +DSP
Sbjct: 58 PHLFPCIVTNLTLGADDKTNEVFAKISLSPGPHHAPAAASSLVGPDPTTTTKESESDSPP 117
Query: 70 --RPK-VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEW 126
+P+ + F+K LT SD + GGFSV R A P LD + P Q LV +D G W
Sbjct: 118 HPQPQELSYFTKELTQSDANNGGGFSVPRYCADHIFPTLDFDADPPVQNLVMRDTRGNPW 177
Query: 127 RFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR------- 179
+F+HI+RG PRRHLLTTGWS FV +K LVAGD VF+R NG+L VG+R R
Sbjct: 178 QFRHIYRGTPRRHLLTTGWSRFVNAKLLVAGDIVVFMRRTNGDLIVGLRRTPRYPLVFPG 237
Query: 180 -------QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKY 230
Q P + + + A+ A F V Y PR +F++ ++
Sbjct: 238 ADANANANQDQQPPPRNARARVPPQDVMEAARLAAEGRPFTVTYFPRQAAGEFVVPRDEV 297
Query: 231 LEAVNNKFAVGMRYKMR-FEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDE--P 287
A+ ++ G +M+ E ED+ RR V + + WR+L++ WD+ P
Sbjct: 298 ERALATRWEPGTEVRMQVMEAEDT--RR----TVWADGHVKALHQNIWRALEIDWDDSSP 351
Query: 288 ASITRPDRVSPWEIEPFVASATPNLVQ 314
S+ V+ W+++ PN V+
Sbjct: 352 LSLKLSRFVNAWQVQLVAYPPLPNTVR 378
>gi|326521704|dbj|BAK00428.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 476
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 115/193 (59%), Gaps = 3/193 (1%)
Query: 164 RGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQ- 222
RG++GEL +GVR + ++ + SQ +LG LA +HAV+T++MF ++Y PR SQ
Sbjct: 12 RGDDGELRLGVRRAVQLKNGSAFPALYSQCSNLGTLANVTHAVSTKSMFQIFYNPRLSQS 71
Query: 223 -FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLK 281
FI+ K+ ++++ F+VG R+KMR+E ED+ ERR++G + G D P W+ SKW+ L
Sbjct: 72 EFIVPYWKFTKSISQPFSVGWRFKMRYESEDAAERRYTGIITGTVDADPRWRGSKWKCLL 131
Query: 282 VQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAP 341
V+WD+ RP+R+SPWEIE A++ +L P +K +P L P +P P
Sbjct: 132 VRWDDDGEFRRPNRLSPWEIELTSAASGSHLAAPT-SKRMKPYLPHANPEYTVPYGGGRP 190
Query: 342 WSARLAQSHNLTQ 354
A AQ + Q
Sbjct: 191 DFAESAQLRKVLQ 203
>gi|356551606|ref|XP_003544165.1| PREDICTED: auxin response factor 17-like [Glycine max]
Length = 545
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 116/336 (34%), Positives = 166/336 (49%), Gaps = 30/336 (8%)
Query: 6 ASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLP---EPSQNEPTTPD 62
AS + LN PL R + C V ++ +A+ +DEV+A+ L P +P N+ T
Sbjct: 42 ASPSHYLN---PLLRSLPFVPCHVSSLDFLADPFSDEVFAKFLLTPLSQQPFPNDTTEAR 98
Query: 63 PCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLH 122
V SFSK+LT SD + GGFSV R A PPLD P+ +
Sbjct: 99 NEEEKDRENGVVSFSKILTPSDANNGGGFSVPRYCADSWFPPLDFXXXXPSSPVATSR-- 156
Query: 123 GYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQS 182
+HI+RG PRRHL TTGWS FV K+LVAGDT VF++ +G + VG+R AR +
Sbjct: 157 -RRVALRHIYRGTPRRHLFTTGWSKFVNHKKLVAGDTVVFVKDSDGRVSVGIRRAARFAA 215
Query: 183 SMPS-----------SVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNK 229
++ + S ++ + +A A+ + A F V Y PRT + F++S
Sbjct: 216 AIETPQPPPAEREGFSRSATGRVTAEAVAAAAESAARNAPFEVVYYPRTGFADFVVSAEV 275
Query: 230 YLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSPHWKDSKWRSLKVQWDEPA 288
E++ + GMR K+ E EDS F GTV + ++ WR L+V WDEP
Sbjct: 276 VEESMKCAWVGGMRVKIAMETEDSSRMTWFQGTVSS----ACASENGPWRMLQVNWDEPE 331
Query: 289 SITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 324
+ RVSPW++E + P + V + NKR R
Sbjct: 332 VLQNAKRVSPWQVE---LVSLPFALHTVYSPNKRLR 364
>gi|222636108|gb|EEE66240.1| hypothetical protein OsJ_22412 [Oryza sativa Japonica Group]
Length = 630
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 99/258 (38%), Positives = 129/258 (50%), Gaps = 49/258 (18%)
Query: 116 LVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR 175
++AKD+HG W+F+HI+RG PRRHLLTTGWSTFV K+LVAGD+ VF+R ENG+L VG+R
Sbjct: 98 VLAKDVHGVVWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFMRTENGDLCVGIR 157
Query: 176 CLARQQSSMPSSV---------------ISSQSMHLG----------------------- 197
+ P + SM L
Sbjct: 158 RAKKGGVGGPEFLPPPPPPPPTPAAGGNYGGFSMFLRGDDDGNKMAAAARGKVRARVRPE 217
Query: 198 -VLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSP 254
V+ A+ AV+ Q VVYY PR S +F + A+ ++ GMR+KM FE EDS
Sbjct: 218 EVVEAANLAVSGQPFEVVYY-PRASTPEFCVKAGAVRAAMRTQWFAGMRFKMAFETEDSS 276
Query: 255 ERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL 312
F GTV V+ P W +S WR L+V WDEP + RVSPW +E + S P +
Sbjct: 277 RISWFMGTVSAVQVADPIRWPNSPWRLLQVSWDEPDLLQNVKRVSPWLVE--LVSNMPAI 334
Query: 313 VQPVLAKNKRPRLSMEVP 330
LA PR + VP
Sbjct: 335 ---HLAPFSPPRKKLCVP 349
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 534 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI-KGQLHTRTKWEIVYTDDEGDMMLV 592
KV MQ VGR LDL+ + Y+ L L +MF I K +L + + Y D G +
Sbjct: 547 CKVFMQSEDVGRTLDLSVVGSYEELYRRLADMFGIEKAELMS----HVFYRDAAGALKHT 602
Query: 593 GDDPWHEFCNMVKRIFICS 611
GD+P+ EF +R+ I +
Sbjct: 603 GDEPFSEFTKTARRLNILT 621
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 26/36 (72%)
Query: 16 IPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLP 51
P R+P+ +LCRV + MA+ +TDEV+A+I L+P
Sbjct: 61 FPGGRVPALVLCRVAGVRFMADPDTDEVFAKIRLVP 96
>gi|242050114|ref|XP_002462801.1| hypothetical protein SORBIDRAFT_02g032210 [Sorghum bicolor]
gi|241926178|gb|EER99322.1| hypothetical protein SORBIDRAFT_02g032210 [Sorghum bicolor]
Length = 622
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/316 (31%), Positives = 155/316 (49%), Gaps = 44/316 (13%)
Query: 10 QELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP 69
++ + L +P + CRV + LMAE +TD++YA+I L+P
Sbjct: 63 EQAGAAVDLRVVPPFVACRVAAVRLMAEPDTDDIYAKIRLVP------------------ 104
Query: 70 RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQEL-VAKDLHGYEWRF 128
L + T G ++L + + + + L AK L +W F
Sbjct: 105 ----------LRPWEPVTDVGDALLGEGSRGGDGDGQQRRRRRPRPLSFAKTLTQSDWTF 154
Query: 129 KHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR----QQSSM 184
+H++RG P RHL+T GWS FV +K+L+ GD+ VF+R E+G++H+G+R R +
Sbjct: 155 RHVYRGNPPRHLITAGWSNFVHNKKLLPGDSVVFVREEDGKVHIGLRRAKRVFCGGNAGR 214
Query: 185 PSSVISSQSMHL----GVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKF 238
+ ++ S V+ A A A Q VV+Y PR S +F + + E++ + +
Sbjct: 215 SGAAVAGPSDGKVPAEDVVEAARLAAAGQPFEVVHY-PRASAPEFCVRADAVKESMRSPW 273
Query: 239 AVGMRYKMRFEGED-SPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRV 296
G+R+KM FE ED S F GT+ GVE P W S WR L+V WDEP + RV
Sbjct: 274 CPGLRFKMAFETEDLSRISWFMGTIAGVEPADPARWPLSPWRLLQVTWDEPELLQNVKRV 333
Query: 297 SPWEIEPFVASATPNL 312
PW +E + S+ PNL
Sbjct: 334 CPWRVE--LVSSMPNL 347
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 532 SRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMML 591
+ KV ++ +GR LDL+ L + L L MF I R+ +VY G++
Sbjct: 532 GQCKVFVESETLGRNLDLSALGSLEELCARLSSMFGISNNAELRS--HMVYRTISGEVKH 589
Query: 592 VGDDPWHEFCNMVKRIFI 609
+GD+P+ F +RI I
Sbjct: 590 IGDEPFSVFVKSARRITI 607
>gi|124359419|gb|ABN05872.1| Transcriptional factor B3 [Medicago truncatula]
Length = 207
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 73/158 (46%), Positives = 97/158 (61%), Gaps = 3/158 (1%)
Query: 20 RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPA---DSPRPKVHSF 76
++PS I CRV +I MA ETDEVYA++ L+P D + K SF
Sbjct: 33 KIPSFIPCRVEDIRYMANHETDEVYAKLRLVPMNINQVSFDNDGVAGINVSETKDKHQSF 92
Query: 77 SKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQP 136
+K LT SD + GGFS R A P +D + + P Q + KD+HG +W F+H++RG P
Sbjct: 93 AKTLTQSDANNGGGFSCPRYCAEMIFPRMDYSGNPPFQGIYPKDVHGEKWHFRHVYRGTP 152
Query: 137 RRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGV 174
+RHLLTTGWS FV+ K+L +GD+ VFLR ENGEL VG+
Sbjct: 153 KRHLLTTGWSPFVSDKKLASGDSVVFLRSENGELRVGI 190
>gi|224063158|ref|XP_002301019.1| predicted protein [Populus trichocarpa]
gi|222842745|gb|EEE80292.1| predicted protein [Populus trichocarpa]
Length = 215
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 72/166 (43%), Positives = 98/166 (59%), Gaps = 11/166 (6%)
Query: 25 ILCRVVNIHLMAEQETDEVYAQITLLP--EPSQNEPTT-PDPC--------PADSPRPKV 73
I C++ + +A+ TDEV+ ++ L+P P N P + +PC D K+
Sbjct: 50 IPCQISAVDFLADPVTDEVFTRLLLIPLDNPFSNLPLSFLEPCRSEGEGANDVDDDERKI 109
Query: 74 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 133
+FSK+LT SD + GGFSV R A PPL+ P Q L D+HG W F+HI+R
Sbjct: 110 LAFSKILTPSDANNGGGFSVPRFCADSIFPPLNYQAEPPVQTLTVADIHGVSWDFRHIYR 169
Query: 134 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
G PRRHLLTTGWS FV +K+L+AGD+ VF+R GE+ +GVR R
Sbjct: 170 GTPRRHLLTTGWSKFVNNKKLIAGDSVVFMRNLKGEMFIGVRRAVR 215
>gi|224084816|ref|XP_002307410.1| predicted protein [Populus trichocarpa]
gi|222856859|gb|EEE94406.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/168 (42%), Positives = 98/168 (58%), Gaps = 15/168 (8%)
Query: 25 ILCRVVNIHLMAEQETDEVYAQITLLP-------------EPSQNEPTTPDPCPADSPRP 71
I C++ + +A+ TDEV+ ++ LLP EPS++E + D
Sbjct: 51 ISCQISAVDFLADPVTDEVFIRLLLLPLNNHSCNLPLSFLEPSRSEGGGVND--VDDDEN 108
Query: 72 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 131
K+ +F+K+LT SD + GGFSV R A PPL+ P Q L D+HG W F+HI
Sbjct: 109 KILAFAKILTPSDANNGGGFSVPRFCADSIFPPLNYQAEPPVQTLTVTDIHGISWDFRHI 168
Query: 132 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 179
+RG PRRHLLTTGWS FV +K+L+AGD+ VF+R GE+ +GVR R
Sbjct: 169 YRGTPRRHLLTTGWSKFVNNKKLIAGDSVVFMRNLKGEMFIGVRRAVR 216
>gi|304308173|gb|ADL70399.1| auxin response factor 11 [Arabidopsis thaliana]
Length = 192
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/159 (48%), Positives = 99/159 (62%), Gaps = 24/159 (15%)
Query: 452 TSCRLFGIELINH-ATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 510
+SCRLFG +L + A+++ P +K +IS S +DS K +
Sbjct: 57 SSCRLFGFDLTSKPASATIPHDK----------QLISVDSNISDSTTKC---------QD 97
Query: 511 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 570
SPKE + + TS RSR KVQMQG AVGRA+DLT L YD LI ELE+MF+I+G
Sbjct: 98 PNSSNSPKEQKQQ----TSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEG 153
Query: 571 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 609
+L + KW IV+TDDEGD MLVGDDPW+EFC M K++FI
Sbjct: 154 ELSPKDKWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFI 192
>gi|116311996|emb|CAJ86354.1| H0814G11.21 [Oryza sativa Indica Group]
gi|125550331|gb|EAY96153.1| hypothetical protein OsI_18032 [Oryza sativa Indica Group]
Length = 525
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/299 (34%), Positives = 150/299 (50%), Gaps = 26/299 (8%)
Query: 21 LPSK---ILCRVVNIHLMAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSF 76
LPS LC + + L A+ T E YA I+LLP P A++ + +
Sbjct: 65 LPSAHRFFLCTITAVDLSADTTTGEPYATISLLPLRHDAPAPAPAAAELAEAESQEFRYY 124
Query: 77 SKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQP 136
+K LT SD + GGFSV R A P L+++ P Q L DL G W F+HI+RG P
Sbjct: 125 AKQLTQSDANNGGGFSVPRLCADHIFPALNLDDDPPVQSLTMGDLQGDSWEFRHIYRGTP 184
Query: 137 RRHLLTTGWSTFVTSKRLVAGDTFVFL----RGENGELHVGVRCLARQQSSMPSSVISSQ 192
RRHLLTTGWS FV +K+LVAGDT VF+ +L VGVR AR S+ +
Sbjct: 185 RRHLLTTGWSKFVNAKQLVAGDTVVFMWCGAPAPERKLLVGVRRAARYSGE--SACNARG 242
Query: 193 SMHLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMR-FE 249
+ + A A Q F V Y PR +F++ + + + + GM+ + + E
Sbjct: 243 RVQPQEVMEAVRLAAEQAAFRVTYYPRHGAGEFVVPRVEVDKGLTTPWRCGMQVRAQVME 302
Query: 250 GEDSPERRFS---GTVVGVEDFSPHWKDSKWRSLKVQWD-EPASITRPDR-VSPWEIEP 303
ED+ RR + GT+ + WR+L+V+WD AS + +R V+PW+++P
Sbjct: 303 AEDT--RRLAWLNGTLTNLR------HQQIWRTLEVEWDASAASSSMKNRFVNPWQVQP 353
>gi|413943363|gb|AFW76012.1| hypothetical protein ZEAMMB73_306865 [Zea mays]
Length = 631
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/166 (45%), Positives = 108/166 (65%), Gaps = 6/166 (3%)
Query: 162 FLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS 221
+R +N +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA +T + F ++Y PR S
Sbjct: 5 LVRNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFTIFYNPRAS 64
Query: 222 --QFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKW 277
+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+ G+ D S W +S W
Sbjct: 65 PSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTITGISDLDSVRWPNSHW 124
Query: 278 RSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 323
RS+KV WDE + R RVS WEIEP + P P + KRP
Sbjct: 125 RSVKVGWDESTAGDRQPRVSLWEIEPL--TTFPTYTSPFPLRLKRP 168
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 535 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLV 592
KV G GR+LD+T Y L EL +F ++GQL R+ W++V+ D E D++LV
Sbjct: 567 KVYKSGT-YGRSLDITRFSSYHELRRELGRLFGLEGQLEDPLRSGWQLVFVDREEDVLLV 625
Query: 593 GDDPWH 598
GDDPW
Sbjct: 626 GDDPWQ 631
>gi|75233030|sp|Q7XSS9.2|ARFM_ORYSJ RecName: Full=Auxin response factor 13
gi|38345524|emb|CAE01808.2| OSJNBa0039K24.27 [Oryza sativa Japonica Group]
gi|215766448|dbj|BAG98756.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 529
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 104/303 (34%), Positives = 150/303 (49%), Gaps = 30/303 (9%)
Query: 21 LPSK---ILCRVVNIHLMAEQETDEVYAQITLLP-----EPSQNEPTTPDPCPADSPRPK 72
LPS LC + + L A+ T E YA I+LLP P A++ +
Sbjct: 65 LPSAHRFFLCTITAVDLSADTTTGEPYATISLLPLRHDAPAPAPAPAPAAAELAEAESQE 124
Query: 73 VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIF 132
++K LT SD + GGFSV R A P L+++ P Q L DL G W F+HI+
Sbjct: 125 FRYYAKQLTQSDANNGGGFSVPRLCADHIFPALNLDDDPPVQSLTMGDLQGDSWEFRHIY 184
Query: 133 RGQPRRHLLTTGWSTFVTSKRLVAGDTFVFL----RGENGELHVGVRCLARQQSSMPSSV 188
RG PRRHLLTTGWS FV +K+LVAGDT VF+ +L VGVR AR S+
Sbjct: 185 RGTPRRHLLTTGWSKFVNAKQLVAGDTVVFMWCGAPAPERKLLVGVRRAARYSGE--SAC 242
Query: 189 ISSQSMHLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKM 246
+ + + A A Q F V Y PR +F++ + + + + GM+ +
Sbjct: 243 NARGRVQPQEVMEAVRLAAEQAAFRVTYYPRHGAGEFVVPRVEVDKGLTTPWRCGMQVRA 302
Query: 247 R-FEGEDSPERRFS---GTVVGVEDFSPHWKDSKWRSLKVQWD-EPASITRPDR-VSPWE 300
+ E ED+ RR + GT+ + WR+L+V+WD AS + +R V+PW+
Sbjct: 303 QVMEAEDT--RRLAWLNGTLTNLR------HQQIWRTLEVEWDASAASSSMKNRFVNPWQ 354
Query: 301 IEP 303
++P
Sbjct: 355 VQP 357
>gi|304308163|gb|ADL70394.1| auxin response factor 11 [Arabidopsis thaliana]
Length = 188
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/155 (48%), Positives = 95/155 (61%), Gaps = 24/155 (15%)
Query: 452 TSCRLFGIELINH-ATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 510
+SCRLFG +L + A+++ P +K +IS S +DS K +
Sbjct: 57 SSCRLFGFDLTSKPASATIPHDK----------QLISVDSNISDSTTKC---------QD 97
Query: 511 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 570
SPKE + + TS RSR KVQMQG AVGRA+DLT L YD LI ELE+MF+I+G
Sbjct: 98 PNSSNSPKEQKQQ----TSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEG 153
Query: 571 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVK 605
+L + KW IV+TDDEGD MLVGDDPW+EFC M K
Sbjct: 154 ELSPKDKWAIVFTDDEGDRMLVGDDPWNEFCKMAK 188
>gi|304308169|gb|ADL70397.1| auxin response factor 11 [Arabidopsis thaliana]
Length = 188
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/155 (48%), Positives = 95/155 (61%), Gaps = 24/155 (15%)
Query: 452 TSCRLFGIELINH-ATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 510
+SCRLFG +L + A+++ P +K +IS S +DS K +
Sbjct: 57 SSCRLFGFDLTSKPASATIPHDK----------QLISVDSNISDSTTKC---------QD 97
Query: 511 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 570
SPKE + + TS RSR KVQMQG AVGRA+DLT L YD LI ELE+MF+I+G
Sbjct: 98 PNSSNSPKEQKQQ----TSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEG 153
Query: 571 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVK 605
+L + KW IV+TDDEGD MLVGDDPW+EFC M K
Sbjct: 154 ELSPKDKWAIVFTDDEGDRMLVGDDPWNEFCKMAK 188
>gi|224103217|ref|XP_002334078.1| predicted protein [Populus trichocarpa]
gi|222869514|gb|EEF06645.1| predicted protein [Populus trichocarpa]
Length = 185
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/135 (50%), Positives = 93/135 (68%), Gaps = 2/135 (1%)
Query: 2 EQLEASTNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
EQ+ ASTN+E++ RIP + LP +++C++ N+ + A+ ETDEVYAQ+TL P Q +
Sbjct: 51 EQVAASTNKEVDARIPNYPSLPPQLICQLHNVTMHADVETDEVYAQLTLQPLSPQEQKDA 110
Query: 61 PDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAK 119
P +P + + F K LTASDTSTHGGFSV R+ A + PPLD +Q P QEL+A+
Sbjct: 111 YLPADLGTPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIAR 170
Query: 120 DLHGYEWRFKHIFRG 134
DLH EW+F+HIFRG
Sbjct: 171 DLHDNEWKFRHIFRG 185
>gi|304308179|gb|ADL70402.1| auxin response factor 11 [Arabidopsis thaliana]
Length = 187
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 74/154 (48%), Positives = 94/154 (61%), Gaps = 24/154 (15%)
Query: 452 TSCRLFGIELINH-ATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 510
+SCRLFG +L + A+++ P +K +IS S +DS K +
Sbjct: 57 SSCRLFGFDLTSKPASATIPHDK----------QLISVDSNISDSTTKC---------QD 97
Query: 511 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 570
SPKE + + TS RSR KVQMQG AVGRA+DLT L YD LI ELE+MF+I+G
Sbjct: 98 PNSSNSPKEQKQQ----TSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEG 153
Query: 571 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMV 604
+L + KW IV+TDDEGD MLVGDDPW+EFC M
Sbjct: 154 ELSPKDKWAIVFTDDEGDRMLVGDDPWNEFCKMA 187
>gi|295844302|gb|ADG43148.1| auxin response factor 14 [Zea mays]
Length = 672
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/190 (43%), Positives = 111/190 (58%), Gaps = 13/190 (6%)
Query: 439 LEQVETGRKTETGTS-CRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDG 497
+ + T +K E+ TS CRLFGIE I A S PV+++ + G A D
Sbjct: 460 INKAPTEKKQESATSGCRLFGIE-IGSAVS-------PVATVASVGQ---DQPPALSVDV 508
Query: 498 KSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDH 557
+SD + + V+ E +S RS TKV MQG+AVGRA+DLT L GY
Sbjct: 509 ESDQLSQPSNANKTDAPVASSERSLNESESRQVRSCTKVIMQGMAVGRAVDLTRLDGYAD 568
Query: 558 LIDELEEMFDIKGQLHTR-TKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVK 616
L +LEEMFDI+G+L KW+++YTDDE D MLVGDDPW+EF MVKRI+I S ++ K
Sbjct: 569 LHRKLEEMFDIQGELSANLKKWKVIYTDDEDDTMLVGDDPWNEFLRMVKRIYIYSYEEAK 628
Query: 617 KMSPGSKLPM 626
++ +K P+
Sbjct: 629 SLTRKAKPPV 638
>gi|224286963|gb|ACN41183.1| unknown [Picea sitchensis]
Length = 450
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 94/255 (36%), Positives = 138/255 (54%), Gaps = 31/255 (12%)
Query: 388 QSDGEW---LTSP-RVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQ-V 442
+S G W L SP + FS ++ N S ++G + P+ + + L E+ V
Sbjct: 164 ESQGNWFVSLISPSQADFSGTHAPGKLERNPTRSIGTGNTGMAVQQPNLLSREMLEEKGV 223
Query: 443 ETGRKTETGTSCRLFGIELINHATSSAPSE----------KVPVSSLT------TEGHII 486
+G ++ C+LFG LI ++ PS V V ++T +E
Sbjct: 224 LSGTRS---ADCKLFGFHLIENSVVGEPSTLRGLAAGEDIHVSVPNITVHEPQSSESDQH 280
Query: 487 STISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRA 546
S S+ A D + I E K Q S KE+ ++ S RS TKV QG A+GRA
Sbjct: 281 SEPSSIAKMDMPAAIIDEEKSS-----QKSSKETHNRPQS-NSTRSCTKVHKQGSALGRA 334
Query: 547 LDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVK 605
+DLT GY LI ELE+MF+I+G+L K W++VYTD+EGDMMLVGDDPW EFC++V+
Sbjct: 335 VDLTKFEGYTELIRELEQMFNIEGELEDPNKGWQVVYTDNEGDMMLVGDDPWQEFCSIVR 394
Query: 606 RIFICSSQDVKKMSP 620
+I+I + ++V+KM+P
Sbjct: 395 KIYIYTREEVEKMTP 409
>gi|194708604|gb|ACF88386.1| unknown [Zea mays]
gi|413920951|gb|AFW60883.1| hypothetical protein ZEAMMB73_247628 [Zea mays]
Length = 379
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 76/179 (42%), Positives = 107/179 (59%), Gaps = 11/179 (6%)
Query: 451 GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 510
G SC+LFGI L + A S V++ E + I D+D + K K+
Sbjct: 164 GNSCKLFGIHLDSPAKSEPLKSPPSVATPAAEKWMADGI----DADKSPEPHKTPKQLGA 219
Query: 511 EQV----QVSPKESQSKQ--SCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEE 564
QV + P+ S+ Q S S RS KV QG+A+GR++DLT GY L+ EL+E
Sbjct: 220 TQVDPVPERCPQASRGTQCKSQGGSTRSCKKVHKQGMALGRSVDLTKFNGYTELVAELDE 279
Query: 565 MFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 622
MFD G+L +K W +VYTD EGDMMLVGDDPW+EFC+MV +IF+ + ++V++M+PG+
Sbjct: 280 MFDFNGELKGCSKEWMVVYTDYEGDMMLVGDDPWNEFCSMVHKIFVYTREEVQRMNPGA 338
>gi|298112255|gb|ADB96374.2| auxin response factor 11 [Arabidopsis thaliana]
Length = 185
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/177 (44%), Positives = 103/177 (58%), Gaps = 26/177 (14%)
Query: 428 PHPSKPNNDTLLEQVETGRKTE--TGTSCRLFGIELINH-ATSSAPSEKVPVSSLTTEGH 484
P + +N ++ V + TE +SCRLFG +L + A+++ P +K
Sbjct: 31 PATERNSNKSVFSSVLQCKITEAPVTSSCRLFGFDLTSKPASATIPHDK----------Q 80
Query: 485 IISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVG 544
+IS S +DS K + SPKE + + TS RSR KVQMQG AVG
Sbjct: 81 LISVDSNISDSTTKC---------QDPNSSNSPKEQKQQ----TSTRSRIKVQMQGTAVG 127
Query: 545 RALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFC 601
RA+DLT L YD LI ELE+MF+I+G+L + KW IV+TDDEGD MLVGDDPW+EFC
Sbjct: 128 RAVDLTLLRSYDELIKELEKMFEIEGELSPKDKWAIVFTDDEGDRMLVGDDPWNEFC 184
>gi|295829036|gb|ADG38187.1| AT2G28350-like protein [Capsella grandiflora]
Length = 134
Score = 131 bits (329), Expect = 1e-27, Method: Composition-based stats.
Identities = 59/101 (58%), Positives = 73/101 (72%)
Query: 75 SFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG 134
SF+K LT SD + GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG
Sbjct: 2 SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRG 61
Query: 135 QPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR 175
PRRHLLTTGWSTFV K+L+AGD+ VFLR E+G+L VG+R
Sbjct: 62 TPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIR 102
>gi|295829026|gb|ADG38182.1| AT2G28350-like protein [Capsella grandiflora]
gi|295829028|gb|ADG38183.1| AT2G28350-like protein [Capsella grandiflora]
gi|295829032|gb|ADG38185.1| AT2G28350-like protein [Capsella grandiflora]
Length = 134
Score = 131 bits (329), Expect = 1e-27, Method: Composition-based stats.
Identities = 59/101 (58%), Positives = 73/101 (72%)
Query: 75 SFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG 134
SF+K LT SD + GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG
Sbjct: 2 SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRG 61
Query: 135 QPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR 175
PRRHLLTTGWSTFV K+L+AGD+ VFLR E+G+L VG+R
Sbjct: 62 TPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIR 102
>gi|295829030|gb|ADG38184.1| AT2G28350-like protein [Capsella grandiflora]
Length = 134
Score = 131 bits (329), Expect = 1e-27, Method: Composition-based stats.
Identities = 59/101 (58%), Positives = 73/101 (72%)
Query: 75 SFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG 134
SF+K LT SD + GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG
Sbjct: 2 SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRG 61
Query: 135 QPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR 175
PRRHLLTTGWSTFV K+L+AGD+ VFLR E+G+L VG+R
Sbjct: 62 TPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIR 102
>gi|345289915|gb|AEN81449.1| AT2G28350-like protein, partial [Capsella rubella]
gi|345289917|gb|AEN81450.1| AT2G28350-like protein, partial [Capsella rubella]
gi|345289919|gb|AEN81451.1| AT2G28350-like protein, partial [Capsella rubella]
gi|345289921|gb|AEN81452.1| AT2G28350-like protein, partial [Capsella rubella]
gi|345289923|gb|AEN81453.1| AT2G28350-like protein, partial [Capsella rubella]
gi|345289925|gb|AEN81454.1| AT2G28350-like protein, partial [Capsella rubella]
gi|345289927|gb|AEN81455.1| AT2G28350-like protein, partial [Capsella rubella]
gi|345289929|gb|AEN81456.1| AT2G28350-like protein, partial [Capsella rubella]
Length = 152
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/104 (57%), Positives = 74/104 (71%)
Query: 72 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 131
K SF+K LT SD + GGFSV R A P LD P Q ++AKD+HG W+F+HI
Sbjct: 8 KPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHI 67
Query: 132 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR 175
+RG PRRHLLTTGWSTFV K+L+AGD+ VFLR E+G+L VG+R
Sbjct: 68 YRGTPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIR 111
>gi|12484201|gb|AAG53999.1|AF336918_1 ARF2 [Arabidopsis thaliana]
gi|225879150|dbj|BAH30645.1| hypothetical protein [Arabidopsis thaliana]
Length = 454
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 113/188 (60%), Gaps = 11/188 (5%)
Query: 441 QVETGRKTETGTSCRLFGIELINH--ATSSAPSEKVPVSSLTTEGHIIS-TISAAADSDG 497
Q ET + E +CRLFGI L N+ T S S++ ++ I S + +D
Sbjct: 238 QEETAKSREG--NCRLFGIPLTNNMNGTDSTMSQRNNLNDAAGLTQIASPKVQDLSDQSK 295
Query: 498 KSDIAKEFKEKKQ--EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGY 555
S + +E+ + + PK++Q+K S+RS TKV QG+A+GR++DL+ Y
Sbjct: 296 GSKSTNDHREQGRPFQTNNPHPKDAQTK---TNSSRSCTKVHKQGIALGRSVDLSKFQNY 352
Query: 556 DHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 614
+ L+ EL+ +F+ G+L K W IVYTD+E DMMLVGDDPW EFC MV++IFI + ++
Sbjct: 353 EELVAELDRLFEFNGELMAPKKDWLIVYTDEENDMMLVGDDPWQEFCCMVRKIFIYTKEE 412
Query: 615 VKKMSPGS 622
V+KM+PG+
Sbjct: 413 VRKMNPGT 420
>gi|226500250|ref|NP_001149486.1| B3 DNA binding domain containing protein [Zea mays]
gi|195627494|gb|ACG35577.1| B3 DNA binding domain containing protein [Zea mays]
gi|224031343|gb|ACN34747.1| unknown [Zea mays]
gi|295844336|gb|ADG43165.1| auxin response factor 31 [Zea mays]
gi|413920079|gb|AFW60011.1| B3 DNA binding domain containing protein [Zea mays]
Length = 462
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/286 (31%), Positives = 136/286 (47%), Gaps = 31/286 (10%)
Query: 22 PSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFS-KVL 80
P C V +I L A+ +TDEV+A+I+L P + PDP ++SP + S+S K L
Sbjct: 62 PHFFPCTVTDISLGADDKTDEVFAKISL--RPGLAAASRPDPGSSNSPPREPLSYSIKEL 119
Query: 81 TASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHL 140
+ SD + G F V R P +D P Q LV D G +W F+H++R + RH+
Sbjct: 120 SQSDANGGGSFCVPRYCGDHVWPKVDFEADPPMQNLVMHDTTGKQWEFRHVYRAKQPRHV 179
Query: 141 LTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGV-- 198
LTTGWS FV +K LVAGD VF+R NG+L VG+R + R ++ +
Sbjct: 180 LTTGWSKFVNAKLLVAGDIIVFMRRPNGDLIVGLRRMPRYAGTLHRPGTGGDAQDPDQPP 239
Query: 199 ---------------LATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVG 241
+ A+ A F V Y PR +F++ N+ ++ + G
Sbjct: 240 PPPPRNALARVPPKDVMEAARLAAEGRPFTVTYYPRKAAGEFVVPRNEVEGVLDTLWEPG 299
Query: 242 MRYKMRF-EGEDSPERRFS-GTVVGVEDFSPHWKDSKWRSLKVQWD 285
M+F E ED+ ++ G V + H K WR+L++ WD
Sbjct: 300 SHVLMQFAEAEDTRRTMWADGHVKAI-----HQK--IWRALEIDWD 338
>gi|295829034|gb|ADG38186.1| AT2G28350-like protein [Capsella grandiflora]
Length = 138
Score = 130 bits (327), Expect = 2e-27, Method: Composition-based stats.
Identities = 59/101 (58%), Positives = 73/101 (72%)
Query: 75 SFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG 134
SF+K LT SD + GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG
Sbjct: 2 SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRG 61
Query: 135 QPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR 175
PRRHLLTTGWSTFV K+L+AGD+ VFLR E+G+L VG+R
Sbjct: 62 TPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIR 102
>gi|304308157|gb|ADL70391.1| auxin response factor 11 [Arabidopsis thaliana]
gi|304308165|gb|ADL70395.1| auxin response factor 11 [Arabidopsis thaliana]
gi|304308167|gb|ADL70396.1| auxin response factor 11 [Arabidopsis thaliana]
Length = 185
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 93/151 (61%), Gaps = 24/151 (15%)
Query: 452 TSCRLFGIELINH-ATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 510
+SCRLFG +L + A+++ P +K +IS S +DS K +
Sbjct: 57 SSCRLFGFDLTSKPASATIPHDK----------QLISVDSNISDSTTKC---------QD 97
Query: 511 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 570
SPKE + + TS RSR KVQMQG AVGRA+DLT L YD LI ELE+MF+I+G
Sbjct: 98 PNSSNSPKEQKQQ----TSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEG 153
Query: 571 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFC 601
+L + KW IV+TDDEGD MLVGDDPW+EFC
Sbjct: 154 ELSPKDKWAIVFTDDEGDRMLVGDDPWNEFC 184
>gi|295829038|gb|ADG38188.1| AT2G28350-like protein [Neslia paniculata]
Length = 135
Score = 129 bits (324), Expect = 5e-27, Method: Composition-based stats.
Identities = 59/101 (58%), Positives = 73/101 (72%)
Query: 75 SFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG 134
SF+K LT SD + GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG
Sbjct: 2 SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRG 61
Query: 135 QPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR 175
PRRHLLTTGWSTFV K+L+AGD+ VFLR E+G+L VG+R
Sbjct: 62 TPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIR 102
>gi|304308265|gb|ADL70445.1| auxin response factor 18 [Arabidopsis thaliana]
Length = 226
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 71/148 (47%), Positives = 88/148 (59%), Gaps = 28/148 (18%)
Query: 450 TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKK 509
T S RLFG +L +++ + P +K P + T AA K
Sbjct: 107 TNCSYRLFGFDLTSNSPAPIPQDKQP----------MDTCGAA---------------KC 141
Query: 510 QEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK 569
QE + + Q KQ ++RSRTKVQMQG+AVGRA+DLT L YD LIDELEEMF+I+
Sbjct: 142 QEPITPTSMSEQKKQQ---TSRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQ 198
Query: 570 GQLHTRTKWEIVYTDDEGDMMLVGDDPW 597
GQL R KW +V+TDDEGDMML GDDPW
Sbjct: 199 GQLLARDKWIVVFTDDEGDMMLAGDDPW 226
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/31 (70%), Positives = 29/31 (93%)
Query: 278 RSLKVQWDEPASITRPDRVSPWEIEPFVASA 308
RSL+VQWDEP ++ RPD+VSPWEIEPF+A++
Sbjct: 1 RSLQVQWDEPTTVQRPDKVSPWEIEPFLATS 31
>gi|304308263|gb|ADL70444.1| auxin response factor 18 [Arabidopsis thaliana]
gi|304308267|gb|ADL70446.1| auxin response factor 18 [Arabidopsis thaliana]
gi|304308271|gb|ADL70448.1| auxin response factor 18 [Arabidopsis thaliana]
gi|304308273|gb|ADL70449.1| auxin response factor 18 [Arabidopsis thaliana]
gi|304308277|gb|ADL70451.1| auxin response factor 18 [Arabidopsis thaliana]
gi|304308279|gb|ADL70452.1| auxin response factor 18 [Arabidopsis thaliana]
gi|304308281|gb|ADL70453.1| auxin response factor 18 [Arabidopsis thaliana]
gi|304308283|gb|ADL70454.1| auxin response factor 18 [Arabidopsis thaliana]
Length = 225
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 71/148 (47%), Positives = 88/148 (59%), Gaps = 28/148 (18%)
Query: 450 TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKK 509
T S RLFG +L +++ + P +K P + T AA K
Sbjct: 106 TNCSYRLFGFDLTSNSPAPIPQDKQP----------MDTCGAA---------------KC 140
Query: 510 QEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK 569
QE + + Q KQ ++RSRTKVQMQG+AVGRA+DLT L YD LIDELEEMF+I+
Sbjct: 141 QEPITPTSMSEQKKQQ---TSRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQ 197
Query: 570 GQLHTRTKWEIVYTDDEGDMMLVGDDPW 597
GQL R KW +V+TDDEGDMML GDDPW
Sbjct: 198 GQLLARDKWIVVFTDDEGDMMLAGDDPW 225
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 279 SLKVQWDEPASITRPDRVSPWEIEPFVASA 308
SL+VQWDEP ++ RPD+VSPWEIEPF+A++
Sbjct: 1 SLQVQWDEPTTVQRPDKVSPWEIEPFLATS 30
>gi|284811299|gb|ADB96388.1| auxin response factor 18 [Arabidopsis thaliana]
gi|284811301|gb|ADB96389.1| auxin response factor 18 [Arabidopsis thaliana]
gi|284811305|gb|ADB96391.1| auxin response factor 18 [Arabidopsis thaliana]
gi|284811307|gb|ADB96392.1| auxin response factor 18 [Arabidopsis thaliana]
Length = 222
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 71/148 (47%), Positives = 88/148 (59%), Gaps = 28/148 (18%)
Query: 450 TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKK 509
T S RLFG +L +++ + P +K P + T AA K
Sbjct: 103 TNCSYRLFGFDLTSNSPAPIPQDKQP----------MDTCGAA---------------KC 137
Query: 510 QEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK 569
QE + + Q KQ ++RSRTKVQMQG+AVGRA+DLT L YD LIDELEEMF+I+
Sbjct: 138 QEPITPTSMSEQKKQQ---TSRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQ 194
Query: 570 GQLHTRTKWEIVYTDDEGDMMLVGDDPW 597
GQL R KW +V+TDDEGDMML GDDPW
Sbjct: 195 GQLLARDKWIVVFTDDEGDMMLAGDDPW 222
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 25/27 (92%)
Query: 282 VQWDEPASITRPDRVSPWEIEPFVASA 308
VQWDEP ++ RPD+VSPWEIEPF+A++
Sbjct: 1 VQWDEPTTVQRPDKVSPWEIEPFLATS 27
>gi|304308275|gb|ADL70450.1| auxin response factor 18 [Arabidopsis thaliana]
gi|304308285|gb|ADL70455.1| auxin response factor 18 [Arabidopsis thaliana]
Length = 224
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 71/148 (47%), Positives = 88/148 (59%), Gaps = 28/148 (18%)
Query: 450 TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKK 509
T S RLFG +L +++ + P +K P + T AA K
Sbjct: 105 TNCSYRLFGFDLTSNSPAPIPQDKQP----------MDTCGAA---------------KC 139
Query: 510 QEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK 569
QE + + Q KQ ++RSRTKVQMQG+AVGRA+DLT L YD LIDELEEMF+I+
Sbjct: 140 QEPITPTSMSEQKKQQ---TSRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQ 196
Query: 570 GQLHTRTKWEIVYTDDEGDMMLVGDDPW 597
GQL R KW +V+TDDEGDMML GDDPW
Sbjct: 197 GQLLARDKWIVVFTDDEGDMMLAGDDPW 224
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 27/29 (93%)
Query: 280 LKVQWDEPASITRPDRVSPWEIEPFVASA 308
L+VQWDEP ++ RPD+VSPWEIEPF+A++
Sbjct: 1 LQVQWDEPTTVQRPDKVSPWEIEPFLATS 29
>gi|304308269|gb|ADL70447.1| auxin response factor 18 [Arabidopsis thaliana]
Length = 225
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 71/148 (47%), Positives = 88/148 (59%), Gaps = 28/148 (18%)
Query: 450 TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKK 509
T S RLFG +L +++ + P +K P + T AA K
Sbjct: 106 TNCSYRLFGFDLTSNSPAPIPQDKQP----------MDTCGAA---------------KC 140
Query: 510 QEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK 569
QE + + Q KQ ++RSRTKVQMQG+AVGRA+DLT L YD LIDELEEMF+I+
Sbjct: 141 QEPITPTSMSEQKKQQ---TSRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQ 197
Query: 570 GQLHTRTKWEIVYTDDEGDMMLVGDDPW 597
GQL R KW +V+TDDEGDMML GDDPW
Sbjct: 198 GQLLARDKWIVVFTDDEGDMMLAGDDPW 225
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 279 SLKVQWDEPASITRPDRVSPWEIEPFVASA 308
SL+VQWDEP ++ RPD+VSPWEIEPF+A++
Sbjct: 1 SLQVQWDEPTTVQRPDKVSPWEIEPFLATS 30
>gi|413920953|gb|AFW60885.1| hypothetical protein ZEAMMB73_247628 [Zea mays]
Length = 192
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 66/109 (60%), Positives = 78/109 (71%), Gaps = 4/109 (3%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
+EQ+EASTNQ Q + + LP KILC V+N+ L AE + DEVYAQ+TLLPE E +
Sbjct: 69 IEQVEASTNQVAEQHMQFYDLPWKILCEVMNVELKAEPDNDEVYAQLTLLPESKPEENGS 128
Query: 61 PDPCPADSP----RPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPL 105
+ PA P RP+VHSF K LTASDTSTHGGFSVLR+HA ECLPPL
Sbjct: 129 SEEMPASPPAALARPRVHSFCKTLTASDTSTHGGFSVLRRHADECLPPL 177
>gi|291196877|emb|CAX63126.1| ETTIN protein [Amborella trichopoda]
Length = 478
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 112/200 (56%), Gaps = 21/200 (10%)
Query: 428 PHPSKPNNDTLLEQVETGRKTETG---TSCRLFGIELINHATSSAPSEKVPVSSLTTE-G 483
P P D ++ G+ T + CRLFG L +E+ P+S+ +
Sbjct: 245 PDVCAPPTDAFRVDIKDGKDGATNARNSCCRLFGFSL---------TEEPPLSNEAMDPA 295
Query: 484 HIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCL--TSNRSRTKVQMQGV 541
H+ ++S+ D + KS E Q K+S+SK CL T+NRS TKV QG
Sbjct: 296 HV--SLSSNDDFNSKSSFQPSTWTVSCETQQ---KQSESKSQCLNKTANRSCTKVHKQGS 350
Query: 542 AVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEF 600
VGRA++L+ GYD LI ELE +F+++G L+ K W++VYTD + DMMLVGDDPW EF
Sbjct: 351 MVGRAINLSKFEGYDDLISELERLFNMEGLLNDPKKGWQVVYTDSDDDMMLVGDDPWQEF 410
Query: 601 CNMVKRIFICSSQDVKKMSP 620
CN+V +I I + +V+KM P
Sbjct: 411 CNIVSKILIYTHDEVEKMIP 430
>gi|414586336|tpg|DAA36907.1| TPA: hypothetical protein ZEAMMB73_585430 [Zea mays]
Length = 273
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/228 (37%), Positives = 119/228 (52%), Gaps = 27/228 (11%)
Query: 69 PRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRF 128
PRP SF+KVLTASD + FSVL A P LD + TP Q + +D+HG EW F
Sbjct: 52 PRPV--SFTKVLTASDANNGDVFSVLANCAKAVFPELDYSLGTPKQFVCVRDVHGVEWMF 109
Query: 129 KHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSV 188
HI+RG P+RHLLT GW+ FV +K+L GD+ VF+R E+ ++HVG+R R +M +
Sbjct: 110 CHIWRGSPKRHLLTAGWNNFVNTKKLRFGDSVVFMREEDSKIHVGLRRTNRLFGAMQGNG 169
Query: 189 ISSQSMHL----GVLAT-----ASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNK 237
+ G ++T A+ F V Y P +S+F +S+ E++
Sbjct: 170 GGPAGAVVGPSDGKVSTEDVVAAARLAGAGLWFEVVYYPHVASSEFCVSVAAVKESM--- 226
Query: 238 FAVGMRYKMRFEGEDSPERR---FSGTVVGVEDFSPH-WKDSKWRSLK 281
+M FE E+S + F GT+ VE P W +S WR LK
Sbjct: 227 -------QMAFETEESSRVKVSLFMGTIANVEATDPAWWPESPWRLLK 267
>gi|304308287|gb|ADL70456.1| auxin response factor 18 [Arabidopsis thaliana]
Length = 225
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/148 (47%), Positives = 88/148 (59%), Gaps = 28/148 (18%)
Query: 450 TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKK 509
T S RLFG +L +++ + P +K P + T AA K
Sbjct: 106 TNCSYRLFGFDLSSNSPAPIPQDKQP----------MDTCGAA---------------KC 140
Query: 510 QEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK 569
QE + + Q KQ ++RSRTKVQMQG+AVGRA+DLT L YD LIDELEEMF+I+
Sbjct: 141 QEPITPTSMSEQKKQQ---TSRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQ 197
Query: 570 GQLHTRTKWEIVYTDDEGDMMLVGDDPW 597
GQL R KW +V+TDDEGDMML GDDPW
Sbjct: 198 GQLLARDKWIVVFTDDEGDMMLAGDDPW 225
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 279 SLKVQWDEPASITRPDRVSPWEIEPFVASA 308
SL+VQWDEP ++ RPD+VSPWEIEPF+A++
Sbjct: 1 SLQVQWDEPTTVQRPDKVSPWEIEPFLATS 30
>gi|357486975|ref|XP_003613775.1| Auxin response factor [Medicago truncatula]
gi|355515110|gb|AES96733.1| Auxin response factor [Medicago truncatula]
Length = 410
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 135/266 (50%), Gaps = 18/266 (6%)
Query: 25 ILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADS-PRPKVHSFSKVLTAS 83
I C V ++L+A+ TDEV+ ++ L P + P D KV S K LT S
Sbjct: 61 IPCTVSTVNLLADPVTDEVFVKLLLTPGTNNCVHEPPPEVREDQHDGVKVVSSGKTLTPS 120
Query: 84 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 143
D + G FSV + A PPLD+ P+Q+L D+HG EW+ +H++RG P RHL+TT
Sbjct: 121 DANNGGAFSVPSECAKLIFPPLDLQAEKPSQKLSVTDIHGKEWKLRHVYRGTPLRHLITT 180
Query: 144 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 203
WS FV K+L+ GD+ VF++ + +Q ++ I+ +S+ T +
Sbjct: 181 NWSEFVDEKKLIGGDSLVFMKKSTRTGTETISVGIHRQKFGAATKIAEKSV------TEA 234
Query: 204 HAVATQTM-FVVYYKPRT---SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPER--R 257
+A + M F V Y P F+++ +A+ NK+ G+R K + ++S +R
Sbjct: 235 VELAEKNMAFDVVYYPTAEGWCDFVVNAKVVEDAMKNKWNSGLRIKHSLKKDNSSKRCSN 294
Query: 258 FSGTVVGVEDFSPHWKDSKWRSLKVQ 283
F GT+ + +P + WR L+V+
Sbjct: 295 FEGTISALS--AP---NRPWRMLEVR 315
>gi|298113241|gb|ADB96390.2| auxin response factor 18 [Arabidopsis thaliana]
Length = 231
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/148 (47%), Positives = 88/148 (59%), Gaps = 28/148 (18%)
Query: 450 TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKK 509
T S RLFG +L +++ + P +K P + T AA K
Sbjct: 112 TNCSYRLFGFDLSSNSPAPIPQDKQP----------MDTCGAA---------------KC 146
Query: 510 QEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK 569
QE + + Q KQ ++RSRTKVQMQG+AVGRA+DLT L YD LIDELEEMF+I+
Sbjct: 147 QEPITPTSMSEQKKQQ---TSRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQ 203
Query: 570 GQLHTRTKWEIVYTDDEGDMMLVGDDPW 597
GQL R KW +V+TDDEGDMML GDDPW
Sbjct: 204 GQLLARDKWIVVFTDDEGDMMLAGDDPW 231
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 32/34 (94%)
Query: 275 SKWRSLKVQWDEPASITRPDRVSPWEIEPFVASA 308
SKWRSL+VQWDEP ++ RPD+VSPWEIEPF+A++
Sbjct: 3 SKWRSLQVQWDEPTTVQRPDKVSPWEIEPFLATS 36
>gi|2245394|gb|AAC49752.1| ARF1-binding protein [Arabidopsis thaliana]
gi|20146085|emb|CAD29696.1| putative auxin-induced protein 26 [Arabidopsis thaliana]
gi|20372805|emb|CAD30210.1| putative auxin-induced protein 30 [Arabidopsis thaliana]
Length = 454
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 112/188 (59%), Gaps = 11/188 (5%)
Query: 441 QVETGRKTETGTSCRLFGIELINH--ATSSAPSEKVPVSSLTTEGHIIS-TISAAADSDG 497
Q ET + E +CRLFGI L N+ T S S+K ++ I S + +D
Sbjct: 238 QEETAKSREG--NCRLFGIPLTNNMNGTDSTMSQKNNLNDAAGLTQIASPKVQDLSDQSK 295
Query: 498 KSDIAKEFKEKKQ--EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGY 555
S + +E+ + + PK++Q+K S+RS TKV QG+A+GR++DL+ Y
Sbjct: 296 GSKSTNDHREQGRPFQTNNPHPKDAQTK---TNSSRSCTKVHKQGIALGRSVDLSKFQNY 352
Query: 556 DHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 614
+ L+ EL+ +F+ G+L K W IVYTD+E DMMLVGDDPW EFC MV++IFI + ++
Sbjct: 353 EELVAELDRLFEFNGELMAPKKDWLIVYTDEENDMMLVGDDPWQEFCCMVRKIFIYTKEE 412
Query: 615 VKKMSPGS 622
V+KM+ G+
Sbjct: 413 VRKMNQGT 420
>gi|284811273|gb|ADB96375.1| auxin response factor 11 [Arabidopsis thaliana]
gi|284811275|gb|ADB96376.1| auxin response factor 11 [Arabidopsis thaliana]
gi|284811277|gb|ADB96377.1| auxin response factor 11 [Arabidopsis thaliana]
gi|304308159|gb|ADL70392.1| auxin response factor 11 [Arabidopsis thaliana]
gi|304308161|gb|ADL70393.1| auxin response factor 11 [Arabidopsis thaliana]
gi|304308175|gb|ADL70400.1| auxin response factor 11 [Arabidopsis thaliana]
gi|304308181|gb|ADL70403.1| auxin response factor 11 [Arabidopsis thaliana]
Length = 183
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/150 (48%), Positives = 92/150 (61%), Gaps = 24/150 (16%)
Query: 452 TSCRLFGIELINH-ATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 510
+SCRLFG +L + A+++ P +K +IS S +DS K +
Sbjct: 57 SSCRLFGFDLTSKPASATIPHDK----------QLISVDSNISDSTTKC---------QD 97
Query: 511 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 570
SPKE + + TS RSR KVQMQG AVGRA+DLT L YD LI ELE+MF+I+G
Sbjct: 98 PNSSNSPKEQKQQ----TSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEG 153
Query: 571 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEF 600
+L + KW IV+TDDEGD MLVGDDPW+EF
Sbjct: 154 ELSPKDKWAIVFTDDEGDRMLVGDDPWNEF 183
>gi|413920088|gb|AFW60020.1| hypothetical protein ZEAMMB73_636851 [Zea mays]
Length = 366
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/163 (42%), Positives = 93/163 (57%), Gaps = 2/163 (1%)
Query: 27 CRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPA--DSPRPKVHSFSKVLTASD 84
C V ++ L AE TDEV+A+I+L P P+ P P P +S R + F L D
Sbjct: 66 CTVTDVSLGAEDRTDEVFAKISLRPGPAAASRPEPGPGPGSSNSTRQGLSYFVNELLHRD 125
Query: 85 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 144
TST G F + R P LD+N + P Q+LV +D G W+F HI+ + R+H LT G
Sbjct: 126 TSTSGMFCIPRYCTEHIFPKLDLNANPPEQDLVMRDTRGKPWQFHHIYVVKIRQHRLTAG 185
Query: 145 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSS 187
WS FV +K LVAGDT VF+R NG+L +G+R A + S P +
Sbjct: 186 WSEFVDAKLLVAGDTIVFMRHPNGDLILGLRRKATRTSWRPRA 228
>gi|357445391|ref|XP_003592973.1| Auxin response factor [Medicago truncatula]
gi|355482021|gb|AES63224.1| Auxin response factor [Medicago truncatula]
Length = 456
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 139/282 (49%), Gaps = 15/282 (5%)
Query: 26 LCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPAD-SPRPKVHSFSKVLTASD 84
LC V + L+A+ TDEV+ ++ L P + P A+ + R +V SF K LT SD
Sbjct: 65 LCIVSAVDLLADPHTDEVFVKLLLTPITNDVHLENPKEEVANLNDRNEVVSFVKTLTRSD 124
Query: 85 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL-TT 143
+ F + R A P LD+ + +Q L D+HG +F H+ RG P+R++L +
Sbjct: 125 VNNARSFHIPRFCADNVFPQLDLEAESSSQHLFVTDVHGEVSKFYHVCRGFPKRNMLYIS 184
Query: 144 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 203
W++FV K+LVAGD+ +F++ G++ VG+R Q ++ + V+
Sbjct: 185 EWNSFVKRKKLVAGDSVIFMKDSTGKIFVGIR--RNTQFVAAAAEQKKDELEKAVMEALK 242
Query: 204 HAVATQTMFVVYYKPRT---SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSG 260
A + +VYY P+ F++ N E++ ++ MR KM+ + S + G
Sbjct: 243 LAEENKAFEIVYY-PQGDDWCDFVVDGNVVDESMKIQWNPRMRVKMK--TDKSSRIPYQG 299
Query: 261 TVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 302
T+ V S + WR L+V WDE P RV+PW +E
Sbjct: 300 TISIVSRTS-----NLWRMLQVNWDEFQVSQIPRRVNPWWVE 336
>gi|296086012|emb|CBI31453.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 134/520 (25%), Positives = 199/520 (38%), Gaps = 100/520 (19%)
Query: 144 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVR------C-------LARQQSSMP----- 185
GWS FV K LVAGD+ VFLR ENG+L VG+R C R+ + P
Sbjct: 102 GWSNFVNKKNLVAGDSIVFLRAENGDLCVGIRRAKRAGCGPEGYSGFLREDENRPILTHS 161
Query: 186 -SSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGM 242
+ + +A A+ A FV+ Y PR S +F + + A+ ++ GM
Sbjct: 162 NAGFRGKGRVRAESVAEAATLAANGQPFVIVYYPRASTPEFCVKASSVRAAMQIQWCPGM 221
Query: 243 RYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWE 300
++KM FE +DS F G + V P W +S WR L+V WDEP + RV+PW
Sbjct: 222 KFKMAFETDDSSRISWFMGNISSVHVNDPIRWPNSPWRLLQVTWDEPDLLQNVKRVNPWL 281
Query: 301 IEPFVASATPNL-VQPVLAKNKRPRLSM--------EVPPLDLPSAASAPWSARLAQSHN 351
+E + S P++ + P K+ RL ++P S A P S S N
Sbjct: 282 VE--LVSHVPSIHLSPFSPPRKKLRLQQQSEFPLVGQIPMPSFSSNALRPSSPLCCISDN 339
Query: 352 LTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAID 411
+ A H + SD N K LF +
Sbjct: 340 IPAGIQGAR------HAQFGLSSSDLHFN-------------------KLQLGLFPLGLQ 374
Query: 412 DNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCR--------LFG--IEL 461
+ +A P+ + NN+ + + G T+ LFG I +
Sbjct: 375 QQLDQTAPPSSILSGNTMSNHENNENISCLLTIGNSTQNSKKNNEIKAPYFFLFGQPILI 434
Query: 462 INHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQV-QVSPKES 520
+ S + +SS SDG + F + Q P+ES
Sbjct: 435 EQQVSQSCSGDTAGISS----------------SDGNPEKTPNFSDGSGSAFHQNGPQES 478
Query: 521 QSKQSCLTSNR-----------SRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK 569
S + LT + KV M+ VGR LDL+ L Y+ L +L MF I+
Sbjct: 479 SSDEGLLTWYKDHQKTNLGLETGHCKVFMESEDVGRTLDLSILGSYEELYRKLANMFGIE 538
Query: 570 GQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 609
++Y D+ G + +GD P+ EF +R+ I
Sbjct: 539 ---RAEMLSNVLYRDEAGIVKHIGDAPFGEFLKTARRLTI 575
>gi|284811269|gb|ADB96373.1| auxin response factor 11 [Arabidopsis thaliana]
gi|304308171|gb|ADL70398.1| auxin response factor 11 [Arabidopsis thaliana]
gi|304308177|gb|ADL70401.1| auxin response factor 11 [Arabidopsis thaliana]
Length = 180
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/147 (47%), Positives = 89/147 (60%), Gaps = 24/147 (16%)
Query: 452 TSCRLFGIELINH-ATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 510
+SCRLFG +L + A+++ P +K +IS S +DS K +
Sbjct: 57 SSCRLFGFDLTSKPASATIPHDK----------QLISVDSNISDSTTKC---------QD 97
Query: 511 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 570
SPKE + + TS RSR KVQMQG AVGRA+DLT L YD LI ELE+MF+I+G
Sbjct: 98 PNSSNSPKEQKQQ----TSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEG 153
Query: 571 QLHTRTKWEIVYTDDEGDMMLVGDDPW 597
+L + KW IV+TDDEGD MLVGDDPW
Sbjct: 154 ELSPKDKWAIVFTDDEGDRMLVGDDPW 180
>gi|296088132|emb|CBI35553.3| unnamed protein product [Vitis vinifera]
Length = 187
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/108 (55%), Positives = 73/108 (67%), Gaps = 1/108 (0%)
Query: 39 ETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVLRKH 97
ETDEVYAQ+TL P Q + P P + + F K L ASDTSTHGGFSV R+
Sbjct: 69 ETDEVYAQMTLQPLSPQEQKDAYLPAELGVPSKQPSNYFCKTLIASDTSTHGGFSVPRRA 128
Query: 98 ATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 145
A + P LD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTG+
Sbjct: 129 AEKVFPSLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGY 176
>gi|296080887|emb|CBI18816.3| unnamed protein product [Vitis vinifera]
Length = 202
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 61/107 (57%), Positives = 73/107 (68%), Gaps = 1/107 (0%)
Query: 39 ETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVLRKH 97
ETDEVYAQ+TL P Q + P P + + F K L ASDTSTHGGFSV R+
Sbjct: 96 ETDEVYAQMTLQPLSPQEQKDAYLPAELGVPSKQPSNYFCKTLIASDTSTHGGFSVPRRA 155
Query: 98 ATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 144
A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTG
Sbjct: 156 AEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTG 202
>gi|357489169|ref|XP_003614872.1| Auxin response factor [Medicago truncatula]
gi|355516207|gb|AES97830.1| Auxin response factor [Medicago truncatula]
Length = 523
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 162/380 (42%), Gaps = 55/380 (14%)
Query: 6 ASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQN-----EPTT 60
A ++ + + L P +LC + ++ L+A TDEV+A++ L P + EP
Sbjct: 42 ACSSPNIETELLLCLRPPSVLCIISSVDLLANLHTDEVFAKLLLTPVTTDGSVQIQEPAP 101
Query: 61 PD------------------PCPADSPRPK------VHSFSKVLTASDTSTHGGFSVLRK 96
PD P P + P + + S+ K+LT SDT G V R+
Sbjct: 102 PDFPDKEENDGNNLVVQVQEPAPPEVPDEEDDDSNNLVSYVKILTQSDT--QSGLFVPRE 159
Query: 97 HATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQP-RRHLLTTGWSTFVTSKRLV 155
P LD+ +++L D+ W +K+ + + + TTGWS FV K+LV
Sbjct: 160 CMELIFPNLDLEDPMQSEKLSVTDIQDVVWTYKYSYHVKKLNSYKFTTGWSQFVRKKKLV 219
Query: 156 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 215
A D+ VF++ G++ VG+ C + S+++ + A F V
Sbjct: 220 ALDSVVFIKNSAGKIFVGI-CRKAMYPATEEEGGKSENLTEKAVKDAVELAGKNMAFQVV 278
Query: 216 YKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMR---FEGEDSPERRF--SGTVVGVEDF 268
Y P + F++ + EA+ N + GM K+R F +S + + GT+ + +
Sbjct: 279 YYPTANWCDFVVDASVVDEAMKNGWEFGMGIKLRLNEFASSNSKKTYYQPKGTISNMSNV 338
Query: 269 SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIE--PFVASATPNLVQP----------- 315
+ WR L+V WD P P+RV+PW+++ P + ++ L P
Sbjct: 339 PSNVP--SWRMLQVNWDGPDISQNPNRVNPWQVDIYPIPSQSSSPLQMPHSYPPIPPPLL 396
Query: 316 VLAKNKRPRLSMEVPPLDLP 335
K PRLS PL +P
Sbjct: 397 PFPPTKSPRLSQSSSPLQMP 416
>gi|291196875|emb|CAX63123.1| ARF4 protein [Amborella trichopoda]
Length = 431
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/94 (55%), Positives = 69/94 (73%), Gaps = 1/94 (1%)
Query: 528 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDE 586
S RS TKV G AVGR++DL+ L GY L+ ELE++F+++G LH K W +VYTD+E
Sbjct: 311 ASKRSCTKVHKHGSAVGRSIDLSKLNGYSDLMSELEQIFNMEGLLHDPEKGWRVVYTDNE 370
Query: 587 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 620
DM+LVGDDPW EFC++V +I IC+ DV+ MSP
Sbjct: 371 NDMVLVGDDPWQEFCDVVCKILICTQDDVENMSP 404
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 257 RFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQP 315
R SG + G+ D P W DSKWR L V+WDE RVSPWEIEP V P L P
Sbjct: 1 RCSGVITGIGDIDPLRWPDSKWRCLMVRWDEDIGDEHRVRVSPWEIEPSV--LPPALNVP 58
Query: 316 VLAKNKRPRL 325
L K RP L
Sbjct: 59 RL-KKLRPSL 67
>gi|147806415|emb|CAN76549.1| hypothetical protein VITISV_031905 [Vitis vinifera]
Length = 273
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/147 (46%), Positives = 83/147 (56%), Gaps = 8/147 (5%)
Query: 17 PLFRLPSKILCRVVNI----HLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RP 71
PL LP+ + RVV A+ ETDEVYAQ+TL P Q + T P P +
Sbjct: 32 PLVSLPT-VGSRVVYFPQGHSEQADVETDEVYAQMTLQPLTPQEQKDTFLPVELGIPSKQ 90
Query: 72 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 131
+ F K LTASDTSTHGGFSV R+ A + PPLD +Q P QEL+A+DLH EW+F+HI
Sbjct: 91 PTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHI 150
Query: 132 FRGQPRRHLLTTGWSTFVTSKRLVAGD 158
FRG R L W S R V D
Sbjct: 151 FRG--RDSYLEQSWPVITLSGRRVGRD 175
>gi|357489189|ref|XP_003614882.1| Auxin response factor [Medicago truncatula]
gi|355516217|gb|AES97840.1| Auxin response factor [Medicago truncatula]
Length = 377
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 148/323 (45%), Gaps = 25/323 (7%)
Query: 15 RIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVH 74
R L R S I C V ++ L + TDEV+A++ L P Q P P D +
Sbjct: 51 RTILDRYRSSIPCIVSSVDLFVDPHTDEVFAKLLLTPVTDQEPPPPVVPGQEDDDGDNLV 110
Query: 75 SFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG 134
S+ K LT SD + V + + P LD+++S Q + DL EWR+ + +
Sbjct: 111 SYVKTLTQSDCTR--VLCVPIECSNLIFPKLDLDKS---QSITVTDLKNQEWRYTYTYSN 165
Query: 135 QPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSM 194
R H TGW FV K+LVA D+ VF++ G++ VG+R + + + + +
Sbjct: 166 SSRLH---TGWLNFVREKKLVANDSVVFIKNSAGKISVGIRRNTKFTTDEAAEGSENLTD 222
Query: 195 HLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGED 252
+ VL A A VVYY + F++ +A+ + GMR K+ + +
Sbjct: 223 EIKVLDAAELAEKNTAFDVVYYPTASGWRDFVVDAKTVDDAMKIGWKSGMRVKLPLKKYE 282
Query: 253 SPERRFS-----GTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIE----- 302
S + + GT+ V + S + + WR L+V WD P+ V+PW++E
Sbjct: 283 SSNSKMTISQLKGTISFVFNHSSNVPN--WRILEVNWDGLDIPQIPNLVNPWQVEVYNIH 340
Query: 303 -PFVASATPNLVQPVLAKNKRPR 324
P +S+T N P LA++ P+
Sbjct: 341 APSTSSSTVN--NPRLAESSSPQ 361
>gi|304308203|gb|ADL70414.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 188
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 77/136 (56%), Gaps = 28/136 (20%)
Query: 194 MHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDS 253
M GV+A+ +A T+ MF V YKPR M+FEG+D
Sbjct: 2 MQHGVIASVVNAFKTKCMFNVVYKPR--------------------------MQFEGKDF 35
Query: 254 PERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLV 313
E+R+ GT++GV D SPHWKDS+WRSLKVQWDE + RP++VSPW+IE + S+ N+
Sbjct: 36 SEKRYDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSS--NIS 93
Query: 314 QPVLAKNKRPRLSMEV 329
Q L K K R E+
Sbjct: 94 QSSLKKKKHWRQLNEI 109
>gi|284930239|gb|ADC31717.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 176
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 78/139 (56%), Gaps = 28/139 (20%)
Query: 191 SQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEG 250
+ M GV+A+ +A T+ MF V YKPR M+FEG
Sbjct: 1 ANCMQHGVIASVVNAFKTKCMFNVVYKPR--------------------------MQFEG 34
Query: 251 EDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP 310
+D E+R+ GT++GV D SPHWKDS+WRSLKVQWDE + RP++VSPW+IE + S+
Sbjct: 35 KDFSEKRYDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSS-- 92
Query: 311 NLVQPVLAKNKRPRLSMEV 329
N+ Q L K K R E+
Sbjct: 93 NISQSSLKKKKHWRQLNEI 111
>gi|357472329|ref|XP_003606449.1| Auxin response factor [Medicago truncatula]
gi|355507504|gb|AES88646.1| Auxin response factor [Medicago truncatula]
Length = 361
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 70/95 (73%), Gaps = 1/95 (1%)
Query: 528 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDE 586
T+ RS TKV QG VGRA+DL+ L GY+ L+ ELE++F ++G L K W I+YTD E
Sbjct: 229 TAKRSCTKVHKQGSLVGRAIDLSRLSGYNDLLSELEKLFGMEGLLRDSDKGWRILYTDSE 288
Query: 587 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPG 621
D+M+VGDDPWHEFC++V +I I + ++V+KM+ G
Sbjct: 289 NDIMVVGDDPWHEFCDVVSKIHIYTKEEVEKMTFG 323
>gi|304308183|gb|ADL70404.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 203
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 77/136 (56%), Gaps = 28/136 (20%)
Query: 194 MHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDS 253
M GV+A+ +A T+ MF V YKPR M+FEG+D
Sbjct: 3 MQHGVIASVVNAFKTKCMFNVVYKPR--------------------------MQFEGKDF 36
Query: 254 PERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLV 313
E+R+ GT++GV D SPHWKDS+WRSLKVQWDE + RP++VSPW+IE + S+ ++
Sbjct: 37 SEKRYDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSS--DIS 94
Query: 314 QPVLAKNKRPRLSMEV 329
Q L K K R E+
Sbjct: 95 QSSLKKKKHWRQLNEI 110
>gi|284930237|gb|ADC31716.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 189
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 78/139 (56%), Gaps = 28/139 (20%)
Query: 191 SQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEG 250
+ M GV+A+ +A T+ MF V YKPR M+FEG
Sbjct: 1 ANCMQHGVIASVVNAFKTKCMFNVVYKPR--------------------------MQFEG 34
Query: 251 EDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP 310
+D E+R+ GT++GV D SPHWKDS+WRSLKVQWDE + RP++VSPW+IE + S+
Sbjct: 35 KDFSEKRYDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSS-- 92
Query: 311 NLVQPVLAKNKRPRLSMEV 329
++ Q L K K R E+
Sbjct: 93 DISQSSLKKKKHWRQLNEI 111
>gi|304308207|gb|ADL70416.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 187
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 77/136 (56%), Gaps = 28/136 (20%)
Query: 194 MHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDS 253
M GV+A+ +A T+ MF V YKPR M+FEG+D
Sbjct: 2 MQHGVIASVVNAFKTKCMFNVVYKPR--------------------------MQFEGKDF 35
Query: 254 PERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLV 313
E+R+ GT++GV D SPHWKDS+WRSLKVQWDE + RP++VSPW+IE + S+ ++
Sbjct: 36 SEKRYDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSS--DIS 93
Query: 314 QPVLAKNKRPRLSMEV 329
Q L K K R E+
Sbjct: 94 QSSLKKKKHWRQLNEI 109
>gi|304308193|gb|ADL70409.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 173
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 78/139 (56%), Gaps = 28/139 (20%)
Query: 191 SQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEG 250
+ M GV+A+ +A T+ MF V YKPR M+FEG
Sbjct: 1 ANCMQHGVIASVVNAFKTKCMFNVVYKPR--------------------------MQFEG 34
Query: 251 EDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP 310
+D E+R+ GT++GV D SPHWKDS+WRSLKVQWDE + RP++VSPW+IE + S+
Sbjct: 35 KDFSEKRYDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSS-- 92
Query: 311 NLVQPVLAKNKRPRLSMEV 329
++ Q L K K R E+
Sbjct: 93 DISQSSLKKKKHWRQLNEI 111
>gi|304308185|gb|ADL70405.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 188
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 76/136 (55%), Gaps = 28/136 (20%)
Query: 194 MHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDS 253
M GV+A+ +A T+ MF V YKPR M+FEG D
Sbjct: 2 MQHGVIASVVNAFKTKCMFNVVYKPR--------------------------MQFEGNDF 35
Query: 254 PERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLV 313
E+R+ GT++GV D SPHWKDS+WRSLKVQWDE + RP++VSPW+IE + S+ ++
Sbjct: 36 SEKRYDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSS--DIS 93
Query: 314 QPVLAKNKRPRLSMEV 329
Q L K K R E+
Sbjct: 94 QSSLKKKKHWRQLNEI 109
>gi|304308191|gb|ADL70408.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 183
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 77/136 (56%), Gaps = 28/136 (20%)
Query: 194 MHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDS 253
M GV+A+ +A T+ MF V YKPR M+FEG+D
Sbjct: 3 MQHGVIASVVNAFKTKCMFNVVYKPR--------------------------MQFEGKDF 36
Query: 254 PERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLV 313
E+R+ GT++GV D SPHWKDS+WRSLKVQWDE + RP++VSPW+IE + S+ ++
Sbjct: 37 SEKRYDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSS--DIS 94
Query: 314 QPVLAKNKRPRLSMEV 329
Q L K K R E+
Sbjct: 95 QSSLKKKKHWRQLNEI 110
>gi|298113103|gb|ADC31715.2| auxin response factor 13 [Arabidopsis thaliana]
Length = 190
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 75/131 (57%), Gaps = 28/131 (21%)
Query: 191 SQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEG 250
+ M GV+A+ +A T+ MF V YKPR M+FEG
Sbjct: 1 ANCMQHGVIASVVNAFKTKCMFNVVYKPR--------------------------MQFEG 34
Query: 251 EDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP 310
+D E+R+ GT++GV D SPHWKDS+WRSLKVQWDE + RP++VSPW+IE + S+
Sbjct: 35 KDFSEKRYDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSS-- 92
Query: 311 NLVQPVLAKNK 321
++ Q L K K
Sbjct: 93 DISQSSLKKKK 103
>gi|357489515|ref|XP_003615045.1| Auxin response factor [Medicago truncatula]
gi|355516380|gb|AES98003.1| Auxin response factor [Medicago truncatula]
Length = 239
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 87/150 (58%), Gaps = 3/150 (2%)
Query: 18 LFRLPSKILCRVVNIHLMAEQETDEVYAQITLLP--EPSQNEPTTPDPCPA-DSPRPKVH 74
L P I C + + L+ + TDEV+A++ L P + +E P PA D V
Sbjct: 77 LHCYPPSISCIISAVDLLVDPHTDEVFAKLLLTPVMDGHGHEQEAPPEVPAEDDDGYNVV 136
Query: 75 SFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG 134
SF K+LT SD ++ GF V LP L ++ P+Q+L D+ G W++ HI+RG
Sbjct: 137 SFVKILTQSDCNSGCGFIVPLPCVDLILPKLSLDDPMPSQKLSVTDIQGRIWQYTHIYRG 196
Query: 135 QPRRHLLTTGWSTFVTSKRLVAGDTFVFLR 164
+ +RHL + GW++FV +K+LVAGD+FVF++
Sbjct: 197 KSKRHLFSRGWTSFVNNKKLVAGDSFVFIK 226
>gi|449532340|ref|XP_004173140.1| PREDICTED: auxin response factor 9-like [Cucumis sativus]
Length = 78
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/69 (71%), Positives = 55/69 (79%), Gaps = 1/69 (1%)
Query: 565 MFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSK- 623
MFD++GQL R KWEIVYTDDEGDMMLVGDDPW EF NMV+RIFICS + VK MS GSK
Sbjct: 1 MFDVRGQLCARDKWEIVYTDDEGDMMLVGDDPWEEFRNMVRRIFICSKEQVKNMSSGSKQ 60
Query: 624 LPMFSIEGE 632
L +EG+
Sbjct: 61 LTSIEVEGD 69
>gi|304308199|gb|ADL70412.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 190
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 78/139 (56%), Gaps = 28/139 (20%)
Query: 191 SQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEG 250
+ M GV+A+ +A T+ MF V YKPR M+FEG
Sbjct: 1 ANCMQHGVIASVVNAFKTKCMFNVVYKPR--------------------------MQFEG 34
Query: 251 EDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP 310
+D E+R+ GT++GV D SPHWKDS+W+SLKVQWDE + RP++VSPW+IE + S+
Sbjct: 35 KDFSEKRYDGTIIGVNDMSPHWKDSEWQSLKVQWDELSPFLRPNQVSPWDIEHLIPSS-- 92
Query: 311 NLVQPVLAKNKRPRLSMEV 329
++ Q L K K R E+
Sbjct: 93 DISQSSLKKEKHWRQLNEI 111
>gi|304308187|gb|ADL70406.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 190
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 77/139 (55%), Gaps = 28/139 (20%)
Query: 191 SQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEG 250
+ M GV+A+ +A T+ MF V YKPR M+FEG
Sbjct: 1 ANCMQHGVIASVVNAFKTKCMFNVVYKPR--------------------------MQFEG 34
Query: 251 EDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP 310
+D E+R+ GT++GV D SPHWKDS+WRSLKVQWDE + RP++V PW+IE + S+
Sbjct: 35 KDFSEKRYDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVLPWDIEHLIPSS-- 92
Query: 311 NLVQPVLAKNKRPRLSMEV 329
++ Q L K K R E+
Sbjct: 93 DISQSSLKKKKHWRQLNEI 111
>gi|357489363|ref|XP_003614969.1| Auxin response factor [Medicago truncatula]
gi|355516304|gb|AES97927.1| Auxin response factor [Medicago truncatula]
Length = 377
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 145/323 (44%), Gaps = 25/323 (7%)
Query: 15 RIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVH 74
R L R S I C V ++ L + TDEV+A++ L P Q P P D +
Sbjct: 51 RTILDRYRSSIPCIVSSVDLFVDPHTDEVFAKLLLTPVTDQEPPPPVVPGQEDDDGDNLV 110
Query: 75 SFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG 134
S+ K LT SD + V + + P LD+++S Q + DL E + + +
Sbjct: 111 SYVKTLTQSDCTR--VLCVPIECSNLIFPKLDLDKS---QSITVTDLKNQERGYTYTYSN 165
Query: 135 QPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSM 194
R H TGW FV K+LVA D+ VF++ G++ VG+R + + + +
Sbjct: 166 SSRLH---TGWLNFVREKKLVANDSVVFIKNSAGKISVGIRRKTKFTTDEADEGSENLTD 222
Query: 195 HLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGED 252
+ VL A A VVYY + F++ +A+ + GMR K+ + +
Sbjct: 223 EIKVLDAAELAEKNTAFDVVYYPTASGWRDFVVDAKTVDDAMKIGWKSGMRVKLPLKKYE 282
Query: 253 SPERRFS-----GTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIE----- 302
S + + GT+ V + S + + WR L+V WD P+ V+PW++E
Sbjct: 283 SSNSKMTISQLKGTISFVYNHSSNVPN--WRMLEVNWDGLDIPQNPNLVNPWQVEVYNIP 340
Query: 303 -PFVASATPNLVQPVLAKNKRPR 324
P +S+T N P LA++ P+
Sbjct: 341 APSTSSSTVN--NPRLAESSSPQ 361
>gi|304308197|gb|ADL70411.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 175
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 77/139 (55%), Gaps = 28/139 (20%)
Query: 191 SQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEG 250
+ M GV+A+ +A T+ MF V YKPR M+FEG
Sbjct: 1 ANCMQHGVIASVVNAFKTKCMFNVVYKPR--------------------------MQFEG 34
Query: 251 EDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP 310
+D E+R+ GT++GV D SPHWKDS+WRSLKVQWDE + RP++V PW+IE + S+
Sbjct: 35 KDFSEKRYDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVLPWDIEHLIPSS-- 92
Query: 311 NLVQPVLAKNKRPRLSMEV 329
++ Q L K K R E+
Sbjct: 93 DISQSSLKKKKHWRQLNEI 111
>gi|326524452|dbj|BAK00609.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 176
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/131 (45%), Positives = 82/131 (62%), Gaps = 4/131 (3%)
Query: 8 TNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE--PTTPDPC 64
T + N RIP + LPS++LC+V NI + A+++TDEVYAQ+ L P S+ + P
Sbjct: 39 TKKTPNSRIPNYPSLPSQLLCQVHNITMHADKDTDEVYAQMMLQPVNSETDVFPIQSLGS 98
Query: 65 PADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGY 124
A S P + F K LTASD STHGGFS+ R+ A + P LD + P QEL+ +DLH
Sbjct: 99 YAKSKHPAEY-FCKNLTASDMSTHGGFSMPRRAAGKLFPQLDYSMQPPNQELIVQDLHDN 157
Query: 125 EWRFKHIFRGQ 135
W F+HI+RG+
Sbjct: 158 MWIFRHIYRGR 168
>gi|304308201|gb|ADL70413.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 180
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 75/132 (56%), Gaps = 28/132 (21%)
Query: 198 VLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR 257
V+A+ +A T+ MF V YKPR M+FEG+D E+R
Sbjct: 1 VIASVVNAFKTKCMFNVVYKPR--------------------------MQFEGKDFSEKR 34
Query: 258 FSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVL 317
+ GT++GV D SPHWKDS+WRSLKVQWDE + RP++VSPW+IE + S+ ++ Q L
Sbjct: 35 YDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSS--DISQSSL 92
Query: 318 AKNKRPRLSMEV 329
K K R E+
Sbjct: 93 KKKKHWRQLNEI 104
>gi|326517364|dbj|BAK00049.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 176
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/131 (45%), Positives = 81/131 (61%), Gaps = 4/131 (3%)
Query: 8 TNQELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE--PTTPDPC 64
T + N RIP + LPS++LC+V NI + A+++TDEVYAQ+ L P S+ P
Sbjct: 39 TKKTPNSRIPNYPSLPSQLLCQVHNITMHADKDTDEVYAQMMLQPVNSETNVFPIQSLGS 98
Query: 65 PADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGY 124
A S P + F K LTASD STHGGFS+ R+ A + P LD + P QEL+ +DLH
Sbjct: 99 YAKSKHPAEY-FCKNLTASDMSTHGGFSMPRRAAGKLFPQLDYSMQPPNQELIVQDLHDN 157
Query: 125 EWRFKHIFRGQ 135
W F+HI+RG+
Sbjct: 158 MWIFRHIYRGR 168
>gi|359475629|ref|XP_003631719.1| PREDICTED: auxin response factor 6-like [Vitis vinifera]
Length = 119
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 53/68 (77%)
Query: 76 FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQ 135
F K L ASDTSTHGGFSV R+ A + P LD +Q P QEL+A+DLH EW+F+HIFRGQ
Sbjct: 31 FCKTLIASDTSTHGGFSVPRRAAEKVFPSLDFSQQPPAQELIARDLHDNEWKFRHIFRGQ 90
Query: 136 PRRHLLTT 143
P+RHLLTT
Sbjct: 91 PKRHLLTT 98
>gi|413920950|gb|AFW60882.1| hypothetical protein ZEAMMB73_247628 [Zea mays]
Length = 314
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 85/154 (55%), Gaps = 11/154 (7%)
Query: 451 GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 510
G SC+LFGI L + A S V++ E + I D+D + K K+
Sbjct: 164 GNSCKLFGIHLDSPAKSEPLKSPPSVATPAAEKWMADGI----DADKSPEPHKTPKQLGA 219
Query: 511 EQV----QVSPKESQSKQ--SCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEE 564
QV + P+ S+ Q S S RS KV QG+A+GR++DLT GY L+ EL+E
Sbjct: 220 TQVDPVPERCPQASRGTQCKSQGGSTRSCKKVHKQGMALGRSVDLTKFNGYTELVAELDE 279
Query: 565 MFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPW 597
MFD G+L +K W +VYTD EGDMMLVGDDPW
Sbjct: 280 MFDFNGELKGCSKEWMVVYTDYEGDMMLVGDDPW 313
>gi|218198775|gb|EEC81202.1| hypothetical protein OsI_24228 [Oryza sativa Indica Group]
Length = 627
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 100/326 (30%), Positives = 141/326 (43%), Gaps = 33/326 (10%)
Query: 16 IPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNE-------PTTPDPCPADS 68
P R+P+ +LCRV + MA+ +TDEV+A+I L+P + + A +
Sbjct: 61 FPGGRVPALVLCRVAGVRFMADPDTDEVFAKIRLVPVRANEQGYAGDADDGIGAAAAAAA 120
Query: 69 PRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRF 128
K SF+K LT SD + GG V +K L S DL R
Sbjct: 121 QEEKPASFAKTLTQSDANNGGGTFVNQKK-------LVAGDSIVFMRTENGDLCVGIRRA 173
Query: 129 KHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSV 188
K G P + G +FLRG++ G + A + + + V
Sbjct: 174 KKGGVGGPEFLPPPPPPPPPTPAAGGNYGGFSMFLRGDDD----GNKMAAAARGKVRARV 229
Query: 189 ISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKM 246
+ V+ A+ AV+ Q VVYY PR S +F + A+ ++ GMR+KM
Sbjct: 230 RPEE-----VVEAANLAVSGQPFEVVYY-PRASTPEFCVKAGAVRAAMRTQWFAGMRFKM 283
Query: 247 RFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 304
FE EDS F GTV V+ P W +S WR L+V WDEP + RVSPW +E
Sbjct: 284 AFETEDSSRISWFMGTVSAVQVADPIRWPNSPWRLLQVSWDEPDLLQNVKRVSPWLVE-- 341
Query: 305 VASATPNLVQPVLAKNKRPRLSMEVP 330
+ S P + LA PR + VP
Sbjct: 342 LVSNMPAI---HLAPFSPPRKKLCVP 364
>gi|304308195|gb|ADL70410.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 168
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 73/131 (55%), Gaps = 28/131 (21%)
Query: 199 LATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRF 258
+A+ +A T+ MF V YKPR M+FEG+D E+R+
Sbjct: 1 IASVVNAFKTKCMFNVVYKPR--------------------------MQFEGKDFSEKRY 34
Query: 259 SGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLA 318
GT++GV D SPHWKDS+WRSLKVQWDE + RP++VSPW+IE + S ++ Q L
Sbjct: 35 DGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSL--DISQSSLK 92
Query: 319 KNKRPRLSMEV 329
K K R E+
Sbjct: 93 KKKHWRQLNEI 103
>gi|414884426|tpg|DAA60440.1| TPA: hypothetical protein ZEAMMB73_638933 [Zea mays]
Length = 496
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 83/123 (67%), Gaps = 4/123 (3%)
Query: 164 RGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS-- 221
R E +L +G+R +R Q+ MPS V+SS SMH+ +LA +HA AT + F +++ PR S
Sbjct: 21 RNEKNQLLLGIRHASRPQTVMPSYVLSSDSMHIELLAAVAHAAATNSRFTIFFNPRASPT 80
Query: 222 QFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRS 279
+F+I L+KY++A+ + + +VGMR++M FE E+S RR+ GT+ V D P W S WRS
Sbjct: 81 EFVIPLSKYIKAIFHTRISVGMRFRMLFETEESSVRRYMGTITEVSDADPVRWPSSYWRS 140
Query: 280 LKV 282
+KV
Sbjct: 141 VKV 143
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/141 (41%), Positives = 89/141 (63%), Gaps = 13/141 (9%)
Query: 164 RGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS-- 221
R E +L +G+R +R Q+ MPS V+SS SMH+ +LA +HA AT + F +++ PR S
Sbjct: 225 RNEKNQLLLGIRHASRPQTVMPSYVLSSDSMHIELLAAVAHAAATNSRFTIFFNPRASPT 284
Query: 222 QFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRS 279
+F+I L+KY++A+ + + +VGMR++M FE E+S RR+ GT+ V D P W S WRS
Sbjct: 285 EFVIPLSKYIKAIFHTRISVGMRFRMLFETEESSVRRYMGTITEVSDADPVRWPSSYWRS 344
Query: 280 LK-------VQW--DEPASIT 291
+K QW +EP +T
Sbjct: 345 VKGDQGVNATQWLHNEPILVT 365
>gi|357445417|ref|XP_003592986.1| Auxin response factor [Medicago truncatula]
gi|357445443|ref|XP_003592999.1| Auxin response factor [Medicago truncatula]
gi|355482034|gb|AES63237.1| Auxin response factor [Medicago truncatula]
gi|355482047|gb|AES63250.1| Auxin response factor [Medicago truncatula]
Length = 323
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 131/282 (46%), Gaps = 23/282 (8%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTT 60
+E +S++ + L R +C + + L+A+ TDEV+A++ L P + +
Sbjct: 47 LEHASSSSSNAYIHSLDLQRFRPFTICIISAVDLLADPHTDEVFAKLLLTPVTNNSCVQD 106
Query: 61 PDPCPA-----DSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQE 115
P P D + SF+++L ++ S H F + R A PPL M S Q
Sbjct: 107 PHEVPNCSNDDDVCDEVIDSFTRILALTNVSKHA-FYIPRFCAENMFPPLGMEVS---QH 162
Query: 116 LVAKDLHGYEWRFKHIFRGQPRRHLL-TTGWSTFVTSKRLVAGDTFVFLRGENGELHVGV 174
L+ D+HG W+F H+ G +R++ T+ W++FV K+L GD VF++ G+L VG+
Sbjct: 163 LLVTDVHGEVWKFHHVCHGFAKRNVFYTSEWASFVERKKLDVGDAVVFMKNSTGKLFVGI 222
Query: 175 RCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT---SQFIISLNKYL 231
R R+ ++ + V+ A + +VYY PR F++ N
Sbjct: 223 R---RKDAAEQ----KKDELEKAVMEAVKLAEENKPFEIVYY-PRGDDWCDFVVDGNIVD 274
Query: 232 EAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWK 273
E++ ++ MR KM+ + S + GT+ V S W+
Sbjct: 275 ESMKIQWNPRMRVKMK--TDKSSRIPYQGTITTVSRTSNLWR 314
>gi|304308189|gb|ADL70407.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 169
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 64/92 (69%), Gaps = 2/92 (2%)
Query: 238 FAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVS 297
F V + +M+FEG+D E+R+ GT++GV D SPHWKDS+WRSLKVQWDE + RP++VS
Sbjct: 1 FNVVYKPRMQFEGKDFSEKRYDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVS 60
Query: 298 PWEIEPFVASATPNLVQPVLAKNKRPRLSMEV 329
PW+IE + S+ ++ Q L K K R E+
Sbjct: 61 PWDIEHLIPSS--DISQSSLKKKKHWRQLNEI 90
>gi|301793227|emb|CBA12004.1| putative auxin response factor 5/7, partial [Gnetum gnemon]
Length = 881
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 78/134 (58%), Gaps = 10/134 (7%)
Query: 216 YKPRTS--QFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-H 271
Y PRTS +F++ L KY +A + ++GMR++M FE E+S RR+ GT+ G+ D P
Sbjct: 2 YNPRTSPSEFVVPLAKYNKAFYGTQVSIGMRFRMMFETEESSVRRYMGTITGISDLDPVR 61
Query: 272 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLS---ME 328
W +S+WR+L+V WDE + + +RVS WEIE ATP + P + KRP L E
Sbjct: 62 WPNSQWRNLQVGWDESGAGDKQNRVSIWEIE---TVATPFFICPPFFRLKRPLLPGILGE 118
Query: 329 VPPLDLPSAASAPW 342
++ S S PW
Sbjct: 119 DSEIEAASKRSFPW 132
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 66/111 (59%), Gaps = 12/111 (10%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 588
R+ TKV G VGR++D+T Y L EL MF ++GQL +T W++V+ D E D
Sbjct: 771 RTYTKVYKLG-NVGRSIDVTRYKNYGELRHELARMFGLEGQLEDPKKTGWQLVFVDHEND 829
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGEDILLSSD 639
++LVGDDPW EF + V+ I I S Q+V +MS EG DI+ ++D
Sbjct: 830 ILLVGDDPWEEFVSCVRYIKILSPQEVLQMSQ---------EGMDIVNNAD 871
>gi|413946060|gb|AFW78709.1| hypothetical protein ZEAMMB73_248195 [Zea mays]
Length = 429
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 84/140 (60%), Gaps = 7/140 (5%)
Query: 198 VLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPE 255
+L+ ++++ +++F + + PR S+FI+ K+L+++N F+VG R+K+ E ED+ E
Sbjct: 1 MLSAVANSLDNRSIFHICFNPRVGASEFIVPYCKFLKSLNYHFSVGTRFKVGCENEDANE 60
Query: 256 RRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQ 314
R F G ++G+ + P HW SKW+SL ++WD + +RVSPW+IE +S + V
Sbjct: 61 RSF-GLIIGISEVDPIHWPGSKWKSLLIKWDGATKYSHQNRVSPWDIEGVGSSVS---VT 116
Query: 315 PVLAKNKRPRLSMEVPPLDL 334
L+ + R + PP DL
Sbjct: 117 HRLSSSVSKRTKLCFPPSDL 136
>gi|20146083|emb|CAD29695.1| early auxin-induced protein 22 [Arabidopsis thaliana]
Length = 278
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 64/91 (70%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 588
R+ TKVQ +G +VGR++D+T GYD L +L MF I+GQL + W++VYTD E D
Sbjct: 150 RTYTKVQKRG-SVGRSIDVTRYSGYDELRHDLARMFGIEGQLEDPLTSDWKLVYTDHEND 208
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++LVGDDPW EF N V+ I I SS +V++MS
Sbjct: 209 ILLVGDDPWEEFVNCVQNIKILSSVEVQQMS 239
>gi|293335341|ref|NP_001168636.1| uncharacterized protein LOC100382422 [Zea mays]
gi|223949733|gb|ACN28950.1| unknown [Zea mays]
gi|414868650|tpg|DAA47207.1| TPA: hypothetical protein ZEAMMB73_931024 [Zea mays]
Length = 446
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 142/309 (45%), Gaps = 31/309 (10%)
Query: 11 ELNQRIPLFRLPS--KILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEP-------TTP 61
E +Q + LP+ + C V ++ L + +TDEV+A+I+L P P + ++
Sbjct: 49 EQHQHLSAAPLPAQDRFHCTVTDVSLGVDDKTDEVFAKISLRPRPGRAAAPPPGPGGSSN 108
Query: 62 DPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMN----QSTPTQELV 117
P PA P K+ F+K L+ +D + +H +P ++ + Q Q++V
Sbjct: 109 SPAPAPGPPQKLRYFTKDLSQTDVYAKFRIPLENEHVLP-IPKVETDGADQQRVQRQDVV 167
Query: 118 AKDLHGYEWRFKHIFRGQP-RRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRC 176
+D G WRF +R P + H L TGW F +KRL AGD VF+R NG+L VGVR
Sbjct: 168 MRDTRGKSWRFSETYRVNPSKEHSLGTGWLDFAKAKRLAAGDKIVFMRRPNGDLIVGVRR 227
Query: 177 LARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAV 234
L + Q V+ A A + F V Y PR + +FI+ ++ +A+
Sbjct: 228 LHVPRYRP----FDFQGPAQDVMEAVRLAAAGRP-FTVTYFPRQAAVEFIVPRSEVDDAL 282
Query: 235 NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQW--DEPASITR 292
+ G +M +++ + V V + + WR L++ W D P + TR
Sbjct: 283 ATSWEPGAVVRMEVMEDENRQH-----TVWVHGRVNAIRQNIWRMLEIIWGVDPPLATTR 337
Query: 293 PDRVSPWEI 301
V+ W++
Sbjct: 338 --SVNAWQV 344
>gi|298111013|gb|ADB96329.2| auxin response factor 1 [Arabidopsis thaliana]
Length = 223
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 61/85 (71%), Gaps = 7/85 (8%)
Query: 258 FSGTVVGV-EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 316
FSGT+VGV E+ S W DS+WRSLKVQWDEP+S+ RP+RVSPWE+EP VA++TP+
Sbjct: 1 FSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQP 60
Query: 317 LAKNKRPRLSMEVPPLDLPSAASAP 341
+NKRPR P LPS A+ P
Sbjct: 61 PQRNKRPR------PPGLPSPATGP 79
>gi|304307923|gb|ADL70256.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 211
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 61/85 (71%), Gaps = 7/85 (8%)
Query: 258 FSGTVVGV-EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 316
FSGT+VGV E+ S W DS+WRSLKVQWDEP+S+ RP+RVSPWE+EP VA++TP+
Sbjct: 1 FSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQP 60
Query: 317 LAKNKRPRLSMEVPPLDLPSAASAP 341
+NKRPR P LPS A+ P
Sbjct: 61 PQRNKRPR------PPGLPSPATGP 79
>gi|284811179|gb|ADB96328.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 216
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 61/85 (71%), Gaps = 7/85 (8%)
Query: 258 FSGTVVGV-EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 316
FSGT+VGV E+ S W DS+WRSLKVQWDEP+S+ RP+RVSPWE+EP VA++TP+
Sbjct: 1 FSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQP 60
Query: 317 LAKNKRPRLSMEVPPLDLPSAASAP 341
+NKRPR P LPS A+ P
Sbjct: 61 PQRNKRPR------PPGLPSPATGP 79
>gi|304307941|gb|ADL70265.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 218
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 61/85 (71%), Gaps = 7/85 (8%)
Query: 258 FSGTVVGV-EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 316
FSGT+VGV E+ S W DS+WRSLKVQWDEP+S+ RP+RVSPWE+EP VA++TP+
Sbjct: 1 FSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQP 60
Query: 317 LAKNKRPRLSMEVPPLDLPSAASAP 341
+NKRPR P LPS A+ P
Sbjct: 61 PQRNKRPR------PPGLPSPATGP 79
>gi|304307943|gb|ADL70266.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 219
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 61/85 (71%), Gaps = 7/85 (8%)
Query: 258 FSGTVVGV-EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 316
FSGT+VGV E+ S W DS+WRSLKVQWDEP+S+ RP+RVSPWE+EP VA++TP+
Sbjct: 1 FSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQP 60
Query: 317 LAKNKRPRLSMEVPPLDLPSAASAP 341
+NKRPR P LPS A+ P
Sbjct: 61 PQRNKRPR------PPGLPSPATGP 79
>gi|297598571|ref|NP_001045857.2| Os02g0141100 [Oryza sativa Japonica Group]
gi|255670593|dbj|BAF07771.2| Os02g0141100, partial [Oryza sativa Japonica Group]
Length = 304
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 114/230 (49%), Gaps = 24/230 (10%)
Query: 397 PRVKFSQ-QLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCR 455
P F+Q Q+F++A+ D + P++SG NND LL +TE
Sbjct: 48 PSSNFNQHQMFKDALPDVEMEGVDPSNSGLF-----GINNDNLLG---FPIETEDLLINA 99
Query: 456 LFGIELINHATSSA----PSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQE 511
L ++ NH ++ P +K + ++T S + S G+SD+A +
Sbjct: 100 LDSVKYQNHISTDVENNYPMQKDALQEIST--------SMVSQSFGQSDMAFNSIDSAIN 151
Query: 512 QVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQ 571
K S L R+ TKV +G AVGR++D+ GY+ L L MF I+GQ
Sbjct: 152 DGAFLNKNSWPAAPLLQRMRTFTKVYKRG-AVGRSIDIGRYSGYEELKHALARMFGIEGQ 210
Query: 572 LHTRTK--WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
L R + W++VY D E D++L+GDDPW EF N V+ I I S Q+V++MS
Sbjct: 211 LEDRQRIGWKLVYKDHEDDILLLGDDPWEEFVNCVRCIRILSPQEVQQMS 260
>gi|304307933|gb|ADL70261.1| auxin response factor 1 [Arabidopsis thaliana]
gi|304307937|gb|ADL70263.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 213
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 61/85 (71%), Gaps = 7/85 (8%)
Query: 258 FSGTVVGV-EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 316
FSGT+VGV E+ S W DS+WRSLKVQWDEP+S+ RP+RVSPWE+EP VA++TP+
Sbjct: 1 FSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQP 60
Query: 317 LAKNKRPRLSMEVPPLDLPSAASAP 341
+NKRPR P LPS A+ P
Sbjct: 61 PQRNKRPR------PPGLPSPATGP 79
>gi|304307925|gb|ADL70257.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 212
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 61/85 (71%), Gaps = 7/85 (8%)
Query: 258 FSGTVVGV-EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 316
FSGT+VGV E+ S W DS+WRSLKVQWDEP+S+ RP+RVSPWE+EP VA++TP+
Sbjct: 1 FSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQP 60
Query: 317 LAKNKRPRLSMEVPPLDLPSAASAP 341
+NKRPR P LPS A+ P
Sbjct: 61 PQRNKRPR------PPGLPSPATGP 79
>gi|304307929|gb|ADL70259.1| auxin response factor 1 [Arabidopsis thaliana]
gi|304307935|gb|ADL70262.1| auxin response factor 1 [Arabidopsis thaliana]
gi|304307939|gb|ADL70264.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 212
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 61/85 (71%), Gaps = 7/85 (8%)
Query: 258 FSGTVVGV-EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 316
FSGT+VGV E+ S W DS+WRSLKVQWDEP+S+ RP+RVSPWE+EP VA++TP+
Sbjct: 1 FSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQP 60
Query: 317 LAKNKRPRLSMEVPPLDLPSAASAP 341
+NKRPR P LPS A+ P
Sbjct: 61 PQRNKRPR------PPGLPSPATGP 79
>gi|284811183|gb|ADB96330.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 198
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 61/85 (71%), Gaps = 7/85 (8%)
Query: 258 FSGTVVGV-EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 316
FSGT+VGV E+ S W DS+WRSLKVQWDEP+S+ RP+RVSPWE+EP VA++TP+
Sbjct: 1 FSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQP 60
Query: 317 LAKNKRPRLSMEVPPLDLPSAASAP 341
+NKRPR P LPS A+ P
Sbjct: 61 PQRNKRPR------PPGLPSPATGP 79
>gi|304307945|gb|ADL70267.1| auxin response factor 1 [Arabidopsis thaliana]
gi|304307947|gb|ADL70268.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 199
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 61/85 (71%), Gaps = 7/85 (8%)
Query: 258 FSGTVVGV-EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 316
FSGT+VGV E+ S W DS+WRSLKVQWDEP+S+ RP+RVSPWE+EP VA++TP+
Sbjct: 1 FSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQP 60
Query: 317 LAKNKRPRLSMEVPPLDLPSAASAP 341
+NKRPR P LPS A+ P
Sbjct: 61 PQRNKRPR------PPGLPSPATGP 79
>gi|284811187|gb|ADB96332.1| auxin response factor 1 [Arabidopsis thaliana]
gi|304307927|gb|ADL70258.1| auxin response factor 1 [Arabidopsis thaliana]
gi|304307931|gb|ADL70260.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 198
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 61/85 (71%), Gaps = 7/85 (8%)
Query: 258 FSGTVVGV-EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 316
FSGT+VGV E+ S W DS+WRSLKVQWDEP+S+ RP+RVSPWE+EP VA++TP+
Sbjct: 1 FSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQP 60
Query: 317 LAKNKRPRLSMEVPPLDLPSAASAP 341
+NKRPR P LPS A+ P
Sbjct: 61 PQRNKRPR------PPGLPSPATGP 79
>gi|75152495|sp|Q8H506.1|Y7833_ORYSJ RecName: Full=B3 domain-containing protein
Os07g0183300/Os07g0183600
gi|25553611|dbj|BAC24871.1| putative auxin response factor 6a [Oryza sativa Japonica Group]
gi|50509190|dbj|BAD30344.1| putative auxin response factor 6a [Oryza sativa Japonica Group]
Length = 762
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 139/295 (47%), Gaps = 40/295 (13%)
Query: 21 LPSKI-LCRVVNIHLMAEQETDEVYAQITLLPEPSQN--EPTTP-DPCPADSPRPKVH-- 74
LP ++ LC+V + L A + +E++A ++L+P +P P DP P+ P+V
Sbjct: 384 LPGRVFLCKVTAVRLDATR--NELFATMSLIPVARDQAIQPQAPADPGPSS---PQVQTT 438
Query: 75 --SFSKVLTASDTSTHGGFSVL--RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKH 130
SF K LT +D + ++ R+ A LP L +N+ P L KD+HG EW +
Sbjct: 439 LVSFVKPLTCTDAVKNRYRFIVPKRETAMGVLPQLQLNEHVP---LYIKDMHGKEWVINY 495
Query: 131 IFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG-ENGELHVGVRCLARQQSSMPSSVI 189
++ H+L++GW F + RLV GD VF+R ++GE ++G+R R P SV
Sbjct: 496 TWKEY--THMLSSGWIKFANANRLVTGDNVVFMRSMDSGERYMGLR---RTLKPEPVSVD 550
Query: 190 SSQSMHLGVLATASHAVATQTMFVVYY-KPRTSQFIISLNKYLEAVNNKFAVGMRYKMRF 248
V+ A + V Y + +F++ A+ KF GM +
Sbjct: 551 E-------VIEAVWRAARLEPFEVTYLSRQDGDEFVVPCGIVHNALRAKFTPGMVVNFVW 603
Query: 249 EGEDS--PERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEI 301
E+ P G V+ +E+++ S WR ++V+W A + R V+ W+I
Sbjct: 604 AVEEDRLPNVGPQGKVIAIENYA----TSIWRMIQVEWPSCAGMNR--YVNFWQI 652
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 69/159 (43%), Gaps = 9/159 (5%)
Query: 22 PSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEP----TTPDPCPADSPRPKVHSFS 77
P LC V + L A+ T+E YA ITL P + P A + ++ F
Sbjct: 66 PRVFLCTVAAVRLRADALTNEAYADITLDPVADHDVPRLLPAPAPAAAAGGQQQQLRYFV 125
Query: 78 KVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPR 137
K L +SD F+V A + PPL + Q L+ KDL G F + G
Sbjct: 126 KTLMSSDAEYRDRFAVPMDVAKDVFPPL--VDAKAVQPLIVKDLQGSPMTFDYGRNGN-- 181
Query: 138 RHLLTTGWSTFVTSKRLVAGDTFVFL-RGENGELHVGVR 175
R L W F V GD+ +F+ R ++ EL+VGVR
Sbjct: 182 RVTLAKVWKKFRDDMDFVDGDSVIFMRRRDDDELYVGVR 220
>gi|222636558|gb|EEE66690.1| hypothetical protein OsJ_23346 [Oryza sativa Japonica Group]
Length = 721
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 139/295 (47%), Gaps = 40/295 (13%)
Query: 21 LPSKI-LCRVVNIHLMAEQETDEVYAQITLLPEPSQN--EPTTP-DPCPADSPRPKVH-- 74
LP ++ LC+V + L A + +E++A ++L+P +P P DP P+ P+V
Sbjct: 343 LPGRVFLCKVTAVRLDATR--NELFATMSLIPVARDQAIQPQAPADPGPSS---PQVQTT 397
Query: 75 --SFSKVLTASDTSTHGGFSVL--RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKH 130
SF K LT +D + ++ R+ A LP L +N+ P L KD+HG EW +
Sbjct: 398 LVSFVKPLTCTDAVKNRYRFIVPKRETAMGVLPQLQLNEHVP---LYIKDMHGKEWVINY 454
Query: 131 IFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG-ENGELHVGVRCLARQQSSMPSSVI 189
++ H+L++GW F + RLV GD VF+R ++GE ++G+R R P SV
Sbjct: 455 TWKEY--THMLSSGWIKFANANRLVTGDNVVFMRSMDSGERYMGLR---RTLKPEPVSVD 509
Query: 190 SSQSMHLGVLATASHAVATQTMFVVYY-KPRTSQFIISLNKYLEAVNNKFAVGMRYKMRF 248
V+ A + V Y + +F++ A+ KF GM +
Sbjct: 510 E-------VIEAVWRAARLEPFEVTYLSRQDGDEFVVPCGIVHNALRAKFTPGMVVNFVW 562
Query: 249 EGEDS--PERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEI 301
E+ P G V+ +E+++ S WR ++V+W A + R V+ W+I
Sbjct: 563 AVEEDRLPNVGPQGKVIAIENYA----TSIWRMIQVEWPSCAGMNR--YVNFWQI 611
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 110/284 (38%), Gaps = 37/284 (13%)
Query: 22 PSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEP----TTPDPCPADSPRPKVHSFS 77
P LC V + L A+ T+E YA ITL P + P A + ++ F
Sbjct: 26 PRVFLCTVAAVRLRADALTNEAYADITLDPVADHDVPRLLPAPAPAAAAGGQQQQLRYFV 85
Query: 78 KVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPR 137
K L +SD F+V A + PPL + Q L+ KDL G F + G
Sbjct: 86 KTLMSSDAEYRDRFAVPMDVAKDVFPPL--VDAKAVQPLIVKDLQGSPMTFDYGRNGN-- 141
Query: 138 RHLLTTGWSTFVTSKRLVAGDTFVFL-RGENGELHVGVRCLARQQSSMPSSVISSQSMHL 196
R L W F V GD+ +F+ R ++ EL+VGV R+Q ++ + + +S
Sbjct: 142 RVTLAKVWKKFRDDMDFVDGDSVIFMRRRDDDELYVGV----RRQRTLDKPLRTRRSRPP 197
Query: 197 GVLATASHAVATQTM-------FVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMR 247
L A V F Y+ R +F++ E G+R + R
Sbjct: 198 TPLPVAVQEVIAAAGRAAAGEQFTATYRSRQDGDEFVVPREVVEE--------GLRLRSR 249
Query: 248 FEGEDSPERRFSGTVVGVEDFSPHWKDSK-------WRSLKVQW 284
F E E ++ PH K + WRS+++ W
Sbjct: 250 FTPEMEVEFVWALEDGAPPSVGPHGKITAIHDTTWMWRSVEIGW 293
>gi|2618731|gb|AAB84358.1| IAA21 [Arabidopsis thaliana]
Length = 381
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 588
R+ TKVQ +G +VGR++D+ GYD L +L MF I+GQL + W++VY D E D
Sbjct: 254 RTYTKVQKRG-SVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHEND 312
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++LVGDDPW EF N V+ I I SS +V++MS
Sbjct: 313 ILLVGDDPWEEFVNCVQSIKILSSAEVQQMS 343
>gi|1711205|gb|AAB92474.1| IAA23 [Arabidopsis thaliana]
Length = 591
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 61/92 (66%), Gaps = 3/92 (3%)
Query: 530 NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEG 587
N + KVQ +G +VGR++D+ GYD L +L MF I+GQL + W++VY D E
Sbjct: 478 NANLYKVQKRG-SVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHEN 536
Query: 588 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
D++LVGDDPW EF N V+ I I SS +V++MS
Sbjct: 537 DILLVGDDPWEEFVNCVQSIKILSSAEVQQMS 568
>gi|149390661|gb|ABR25348.1| auxin responsive protein [Oryza sativa Indica Group]
Length = 209
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 588
R+ TKV +G AVGR++D++ GYD L L MF I+GQL R + W++VY D E D
Sbjct: 75 RTFTKVYKRG-AVGRSIDMSQFSGYDELKHALARMFSIEGQLEERQRIGWKLVYKDHEDD 133
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++L+GDDPW EF VK I I S Q+V++MS
Sbjct: 134 ILLLGDDPWEEFVGCVKCIRILSPQEVQQMS 164
>gi|158513351|sp|A3BH85.1|ARFT_ORYSJ RecName: Full=Putative auxin response factor 20
Length = 728
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 90/294 (30%), Positives = 130/294 (44%), Gaps = 37/294 (12%)
Query: 18 LFRLPSKI---LCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVH 74
L RLP I C V ++ L + E+ E YA I+LLP S ++ T PA P
Sbjct: 61 LSRLPDPIHPVPCTVADLVLDVDAESGEAYATISLLPG-SHDDTTARRQVPAHG-EPGFR 118
Query: 75 SFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG 134
F K L+ +D +++ VL A LPPLD+ + +DL G + F HI+
Sbjct: 119 FFEKQLSPADVTSNA--LVLPAGAEHVLPPLDIAAYQTARLFDVRDLRGKRFEFVHIWDK 176
Query: 135 QPRRHLL-------TTGWSTFVTSKRLVAGDTFVFLR------GENGELHVGVRCLARQQ 181
+ R++L GW FV +KRL DT VF+R +GEL VGVR R +
Sbjct: 177 KRCRYMLGDLGVNDNDGWRGFVKAKRLATRDTVVFMRRGGGDGDGDGELLVGVRRAPRAR 236
Query: 182 SS-MPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLE---AVN 235
P + V++ A+ T F V Y PR T +F++S ++Y+ +
Sbjct: 237 GGHHPRPGVEDNK----VVSEVWLAMQGVTPFEVTYYPREGTFEFVVSRDEYIGFSFSPF 292
Query: 236 NKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPAS 289
F G +R + SGTV + P WR L+V WD+ AS
Sbjct: 293 YPFVPGTTVHLRMNPLQIAQ-SISGTVRTFDHLRP------WRMLEVDWDQAAS 339
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 127/292 (43%), Gaps = 44/292 (15%)
Query: 40 TDEVYAQITLLPEPS----QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGG----- 90
+D+ YA I+L P + P DP + F K L+ SD + +GG
Sbjct: 399 SDDSYAMISLFPGDCYVTHRPLPAARDPVGGQR---EFCFFDKKLSPSDAAANGGGSGAL 455
Query: 91 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQP--RR---HLLTTGW 145
F + + A E + P +L +L G W F H + RR H L GW
Sbjct: 456 FVIPKPSAAEHVLPR-------IPDLRVTNLQGGRWEFGHTWSDADTDRRSSSHTLAAGW 508
Query: 146 STFVTSKRLVAGDTFVFLRGE-NGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASH 204
S FV +KRL GDT +F+R GE VGVR + MP + +A A
Sbjct: 509 SAFVKAKRLCVGDTVIFMRRRPGGEPLVGVR--RKPHGGMPVGIPDKH------VADAWL 560
Query: 205 AVATQTMFVVYYKP--RTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTV 262
++ F V Y P T++F++ + +E + A G R ++ +D+ RR V
Sbjct: 561 DASSAQPFRVTYCPWQGTAEFVVRREE-VEG-SPPLAPGTRVRLLMNPDDA-RRRSQPPV 617
Query: 263 VG-VEDFSPHWKDSKWRSLKVQWDE--PASITRPDRVSPWEIEPFVASATPN 311
G V D H + S+WR L+V WD P + T RV+ W+++P + P
Sbjct: 618 YGTVRDV--HCR-SEWRMLEVDWDRDSPLAPTMNRRVNSWQVQPVQLALPPQ 666
>gi|168037539|ref|XP_001771261.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677502|gb|EDQ63972.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 227
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 65/119 (54%), Gaps = 5/119 (4%)
Query: 58 PTTPDPCPADSPRP----KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPT 113
P TP P D PR + H F K +T SD + ++HA C P LD++ ++P
Sbjct: 109 PVTPPNLPRDEPRESSPTREHLFDKAVTPSDVGKLNRLVIPKQHAERCFP-LDLSANSPG 167
Query: 114 QELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHV 172
Q L +D+ G WRF++ + + ++LT GWS FV K+L AGD F RG N EL++
Sbjct: 168 QTLSFEDVSGKHWRFRYSYWNSSQSYVLTKGWSRFVKEKKLDAGDIVSFERGRNHELYI 226
>gi|25553609|dbj|BAC24869.1| auxin response factor-like protein [Oryza sativa Japonica Group]
gi|50509188|dbj|BAD30342.1| auxin response factor-like protein [Oryza sativa Japonica Group]
gi|222636556|gb|EEE66688.1| hypothetical protein OsJ_23343 [Oryza sativa Japonica Group]
Length = 752
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/294 (30%), Positives = 130/294 (44%), Gaps = 37/294 (12%)
Query: 18 LFRLPSKI---LCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVH 74
L RLP I C V ++ L + E+ E YA I+LLP S ++ T PA P
Sbjct: 61 LSRLPDPIHPVPCTVADLVLDVDAESGEAYATISLLPG-SHDDTTARRQVPAHG-EPGFR 118
Query: 75 SFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG 134
F K L+ +D +++ VL A LPPLD+ + +DL G + F HI+
Sbjct: 119 FFEKQLSPADVTSNA--LVLPAGAEHVLPPLDIAAYQTARLFDVRDLRGKRFEFVHIWDK 176
Query: 135 QPRRHLL-------TTGWSTFVTSKRLVAGDTFVFLR------GENGELHVGVRCLARQQ 181
+ R++L GW FV +KRL DT VF+R +GEL VGVR R +
Sbjct: 177 KRCRYMLGDLGVNDNDGWRGFVKAKRLATRDTVVFMRRGGGDGDGDGELLVGVRRAPRAR 236
Query: 182 SS-MPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLE---AVN 235
P + V++ A+ T F V Y PR T +F++S ++Y+ +
Sbjct: 237 GGHHPRPGVEDNK----VVSEVWLAMQGVTPFEVTYYPREGTFEFVVSRDEYIGFSFSPF 292
Query: 236 NKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPAS 289
F G +R + SGTV + P WR L+V WD+ AS
Sbjct: 293 YPFVPGTTVHLRMNPLQIAQ-SISGTVRTFDHLRP------WRMLEVDWDQAAS 339
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 127/292 (43%), Gaps = 44/292 (15%)
Query: 40 TDEVYAQITLLPEPS----QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGG----- 90
+D+ YA I+L P + P DP + F K L+ SD + +GG
Sbjct: 423 SDDSYAMISLFPGDCYVTHRPLPAARDPVGGQR---EFCFFDKKLSPSDAAANGGGSGAL 479
Query: 91 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQP--RR---HLLTTGW 145
F + + A E + P +L +L G W F H + RR H L GW
Sbjct: 480 FVIPKPSAAEHVLPR-------IPDLRVTNLQGGRWEFGHTWSDADTDRRSSSHTLAAGW 532
Query: 146 STFVTSKRLVAGDTFVFLRGE-NGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASH 204
S FV +KRL GDT +F+R GE VGVR + MP + +A A
Sbjct: 533 SAFVKAKRLCVGDTVIFMRRRPGGEPLVGVR--RKPHGGMPVGIPDKH------VADAWL 584
Query: 205 AVATQTMFVVYYKP--RTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTV 262
++ F V Y P T++F++ + +E + A G R ++ +D+ RR V
Sbjct: 585 DASSAQPFRVTYCPWQGTAEFVVRREE-VEG-SPPLAPGTRVRLLMNPDDA-RRRSQPPV 641
Query: 263 VG-VEDFSPHWKDSKWRSLKVQWDE--PASITRPDRVSPWEIEPFVASATPN 311
G V D H + S+WR L+V WD P + T RV+ W+++P + P
Sbjct: 642 YGTVRDV--HCR-SEWRMLEVDWDRDSPLAPTMNRRVNSWQVQPVQLALPPQ 690
>gi|414882153|tpg|DAA59284.1| TPA: hypothetical protein ZEAMMB73_909747 [Zea mays]
Length = 377
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 61/107 (57%), Gaps = 23/107 (21%)
Query: 74 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEW-RFKHIF 132
H F K LTASDTSTHGGFSV R+ A +C PPL+ W RFK
Sbjct: 121 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLEF------------------WSRFKECK 162
Query: 133 RGQPRRHLL----TTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR 175
R R +++ TTG S FV K+LV+ D +FLRG+NGEL +GVR
Sbjct: 163 RTSMRSYVMAAPQTTGCSAFVNKKKLVSRDAVLFLRGDNGELRLGVR 209
>gi|359497444|ref|XP_003635519.1| PREDICTED: auxin response factor 6-like [Vitis vinifera]
Length = 109
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 37/58 (63%), Positives = 44/58 (75%)
Query: 76 FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 133
F K L ASDTSTHGGFSV R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFR
Sbjct: 31 FCKTLIASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFR 88
>gi|293336069|ref|NP_001170351.1| uncharacterized protein LOC100384328 [Zea mays]
gi|224035287|gb|ACN36719.1| unknown [Zea mays]
Length = 326
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 60/95 (63%), Gaps = 4/95 (4%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 588
R+ KV G +VGR+LD+T Y L +EL +MF IKGQL R+ W++V+ D E D
Sbjct: 227 RTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDREND 285
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS-PGS 622
++L+GDDPW F N V I I S +DV KM PG+
Sbjct: 286 VLLLGDDPWESFVNSVWYIKILSPEDVHKMGKPGN 320
>gi|407232674|gb|AFT82679.1| ARF32 ARF type transcription factor, partial [Zea mays subsp. mays]
gi|414868651|tpg|DAA47208.1| TPA: hypothetical protein ZEAMMB73_035171 [Zea mays]
Length = 418
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 126/272 (46%), Gaps = 19/272 (6%)
Query: 27 CRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRP-----KVHSFSKVLT 81
C V ++ L + +TDEV+A+I+L P P + P P + + K+ F+K L+
Sbjct: 108 CTVTDVSLGVDDKTDEVFAKISLRPRPGRAAAPPPGPGGSSNSPAPSPPQKLRYFTKELS 167
Query: 82 ASDTSTHGGFSVLRKHATECLP-PLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQP-RRH 139
+D + +H LP P+ Q++V +D G WRF + P ++H
Sbjct: 168 QTDVYARFRIPLDNEH---VLPIPMVDTDGVQRQDVVMRDTSGKSWRFSKTYSVNPSKQH 224
Query: 140 LLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVL 199
LTTGW F +KRL AGD VF+R NG+L VGVR L + + +
Sbjct: 225 SLTTGWLDFAKAKRLAAGDKIVFMRRPNGDLIVGVRRLDVPRYPLFDFQGPDPDQPAQDV 284
Query: 200 ATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR 257
A A F V Y PR + +FI+ ++ +A+ + G +M E + R+
Sbjct: 285 MEAVRLAAAGRPFTVTYFPRQAAVEFIVPRSEVDDALATSWEPGALVRM--EVMEDENRQ 342
Query: 258 FSGTVVG-VEDFSPHWKDSKWRSLKVQWDEPA 288
++ VVG VE + + WR L++ W P+
Sbjct: 343 YTMWVVGRVEAI----RQNIWRMLEIIWGVPS 370
>gi|357485553|ref|XP_003613064.1| Auxin response factor 3b [Medicago truncatula]
gi|355514399|gb|AES96022.1| Auxin response factor 3b [Medicago truncatula]
Length = 412
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 75/123 (60%), Gaps = 8/123 (6%)
Query: 183 SMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVN-NKFA 239
S+PSSV+S+ +M + L A A +T+ V Y P S+F++ L+KY A+ ++ +
Sbjct: 36 SLPSSVLSANNMPIDALVVA----ANRTLLPVVYYPGACVSEFVVPLSKYNNALFVSQLS 91
Query: 240 VGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSP 298
+G+R+ M FE + GT+VG+ D P W DS+W++++V+WD+P +P+RV
Sbjct: 92 IGLRFDMMFETKAFDTCCNMGTIVGISDLDPLMWPDSRWKNIEVKWDKPDCGGKPNRVCS 151
Query: 299 WEI 301
W+I
Sbjct: 152 WDI 154
>gi|212274925|ref|NP_001130477.1| uncharacterized protein LOC100191575 [Zea mays]
gi|194689238|gb|ACF78703.1| unknown [Zea mays]
Length = 430
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 126/272 (46%), Gaps = 19/272 (6%)
Query: 27 CRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRP-----KVHSFSKVLT 81
C V ++ L + +TDEV+A+I+L P P + P P + + K+ F+K L+
Sbjct: 108 CTVTDVSLGVDDKTDEVFAKISLRPRPGRAAAPPPGPGGSSNSPAPSPPQKLRYFTKELS 167
Query: 82 ASDTSTHGGFSVLRKHATECLP-PLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQP-RRH 139
+D + +H LP P+ Q++V +D G WRF + P ++H
Sbjct: 168 QTDVYARFRIPLDNEH---VLPIPMVDTDGVQRQDVVMRDTSGKSWRFSKTYSVNPSKQH 224
Query: 140 LLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVL 199
LTTGW F +KRL AGD VF+R NG+L VGVR L + + +
Sbjct: 225 SLTTGWLDFAKAKRLAAGDKIVFMRRPNGDLIVGVRRLDVPRYPLFDFQGPDPDQPAQDV 284
Query: 200 ATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR 257
A A F V Y PR + +FI+ ++ +A+ + G +M E + R+
Sbjct: 285 MEAVRLAAAGRPFTVTYFPRQAAVEFIVPRSEVDDALATSWEPGALVRM--EVMEDENRQ 342
Query: 258 FSGTVVG-VEDFSPHWKDSKWRSLKVQWDEPA 288
++ VVG VE + + WR L++ W P+
Sbjct: 343 YTMWVVGRVEAI----RQNIWRMLEIIWGVPS 370
>gi|294460143|gb|ADE75654.1| unknown [Picea sitchensis]
gi|294464227|gb|ADE77628.1| unknown [Picea sitchensis]
Length = 96
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/57 (59%), Positives = 50/57 (87%), Gaps = 1/57 (1%)
Query: 565 MFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 620
MF+I+G+L +K W++VYTD+EGDMMLVGDDPW EFC++V++IFI + ++V+KM+P
Sbjct: 1 MFNIEGELGNPSKGWQVVYTDNEGDMMLVGDDPWQEFCSIVRKIFIYTREEVEKMTP 57
>gi|25272004|gb|AAN74744.1| hypothetical protein [Marchantia polymorpha]
Length = 690
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 61/115 (53%), Gaps = 1/115 (0%)
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
P +D R + H F K +T SD + ++HA C P LD+ + P Q L +D
Sbjct: 184 PSTSASDFARNREHLFEKAVTPSDVGKLNRLVIPKQHAERCFP-LDLALNAPCQTLSFED 242
Query: 121 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR 175
+ G WRF++ + + ++ T GWS F+ K+L AGDT F RG N EL++ R
Sbjct: 243 VSGKHWRFRYSYWNSSQSYVFTKGWSCFLKGKKLEAGDTVSFERGPNQELYIDFR 297
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 64/123 (52%), Gaps = 4/123 (3%)
Query: 56 NEPTTPDPCPADSPRPKV---HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTP 112
N P D P+ P+P + H F K +T SD + ++HA C P LD+ + P
Sbjct: 49 NPPNESDDPPSLPPKPTMQREHLFEKAVTPSDVGKLNRLVIPKQHAERCFP-LDLALNVP 107
Query: 113 TQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHV 172
Q L +D+ G WRF++ + + ++ T WS F+ K+L AGDT F RG N EL++
Sbjct: 108 CQTLSFEDVSGKHWRFRYSYWNSSQSYVFTKSWSCFLKGKKLEAGDTVSFERGPNQELYI 167
Query: 173 GVR 175
R
Sbjct: 168 DFR 170
>gi|326487181|dbj|BAJ89575.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 449
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 61/101 (60%), Gaps = 3/101 (2%)
Query: 529 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 586
++R+ KV G +VGR+LD+T Y L +EL +MF I+GQL R+ W++V+ D E
Sbjct: 348 TSRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIRGQLDDPDRSGWQLVFVDRE 406
Query: 587 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMF 627
D++L+GDDPW F N V I I S +DV K+ P +
Sbjct: 407 NDVLLLGDDPWESFVNSVWYIKILSPEDVHKLGKQGNDPRY 447
>gi|357491401|ref|XP_003615988.1| Auxin response factor [Medicago truncatula]
gi|355517323|gb|AES98946.1| Auxin response factor [Medicago truncatula]
Length = 170
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/107 (48%), Positives = 70/107 (65%), Gaps = 10/107 (9%)
Query: 138 RHLLTTGWSTFVTSKRLVAGDTFVFL-------RGENGELHVGVRCLARQQSSMPSSVIS 190
RHLLTTGWS FV++K LVAGD+ +F R E +L G+R Q+ MPSSV+S
Sbjct: 58 RHLLTTGWSVFVSAKILVAGDSVMFTWQCIFFNRNEKNQLLFGIRHAIWPQTVMPSSVLS 117
Query: 191 SQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFII-SLNKYLEAV 234
+ S+HLG+LA +HA AT + F ++Y PR S+F+I SL+ LE V
Sbjct: 118 TDSLHLGLLAAVAHAAATNSPFTIFYNPRACPSEFVIPSLSIMLEYV 164
>gi|297738134|emb|CBI27335.3| unnamed protein product [Vitis vinifera]
Length = 163
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 60/94 (63%), Gaps = 3/94 (3%)
Query: 528 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDD 585
T +R+ KV G +VGR+LD+T Y L +EL +MF I+G+L R+ W++V+ D
Sbjct: 33 TPSRTFVKVYKSG-SVGRSLDITRFSSYHELREELGQMFGIEGKLENPLRSGWQLVFVDR 91
Query: 586 EGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
E D++L+GDDPW F N V I I S +DV+KM
Sbjct: 92 ENDVLLLGDDPWEAFVNNVWYIKILSPEDVQKMG 125
>gi|255635390|gb|ACU18048.1| unknown [Glycine max]
Length = 120
Score = 82.4 bits (202), Expect = 6e-13, Method: Composition-based stats.
Identities = 45/97 (46%), Positives = 60/97 (61%), Gaps = 6/97 (6%)
Query: 242 MRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWE 300
MR++MRFE ED+ ERR +G + G+ D P W SKWR L V+WD+ + R +RVSPWE
Sbjct: 1 MRFRMRFETEDAAERRCTGLIAGISDVDPVRWLGSKWRCLLVRWDDIEA-ARRNRVSPWE 59
Query: 301 IEPF-VASATPNLVQPVLAKNKRPRLSMEVPPLDLPS 336
IEP AS + NL+ L KR R+ M L+ P+
Sbjct: 60 IEPSGSASNSSNLMSAGL---KRTRIGMTSVKLEFPT 93
>gi|168061668|ref|XP_001782809.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665711|gb|EDQ52386.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 100
Score = 82.4 bits (202), Expect = 6e-13, Method: Composition-based stats.
Identities = 45/99 (45%), Positives = 60/99 (60%), Gaps = 3/99 (3%)
Query: 536 VQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGD 594
V QG VGR +DL YD L L +F+++GQL TK W++VYTD E D++LVGD
Sbjct: 1 VYQQG-KVGRTIDLRKCESYDGLRRVLANLFNLQGQLDDVTKGWQLVYTDHENDVLLVGD 59
Query: 595 DPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGED 633
DPW EFC V+ + I S QD + G ++P S E +D
Sbjct: 60 DPWEEFCGCVRSLKILSPQDAAGQTVG-RIPASSCEEDD 97
>gi|293332071|ref|NP_001169029.1| uncharacterized protein LOC100382863 [Zea mays]
gi|223974533|gb|ACN31454.1| unknown [Zea mays]
Length = 122
Score = 82.0 bits (201), Expect = 8e-13, Method: Composition-based stats.
Identities = 45/97 (46%), Positives = 61/97 (62%), Gaps = 4/97 (4%)
Query: 529 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 586
+ R+ KV G +VGR+LD+T Y L +EL +MF IKGQL R+ W++V+ D E
Sbjct: 21 TTRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRE 79
Query: 587 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM-SPGS 622
D++L+GDDPW F N V I I S +DV KM PG+
Sbjct: 80 NDVLLLGDDPWESFVNSVWYIKILSPEDVHKMGKPGN 116
>gi|302761230|ref|XP_002964037.1| hypothetical protein SELMODRAFT_28604 [Selaginella moellendorffii]
gi|300167766|gb|EFJ34370.1| hypothetical protein SELMODRAFT_28604 [Selaginella moellendorffii]
Length = 113
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMM 590
R+ TKV G ++GRA+D+T Y L EL MF++ GQL ++ W++V+ D EGD++
Sbjct: 30 RTYTKVYKLG-SIGRAVDVTRFSNYTELRWELARMFNLDGQLDQKSGWQLVFIDHEGDIL 88
Query: 591 LVGDDPWHEFCNMVKRIFICSSQDV 615
LVGDDPW EF + V+ I I S +V
Sbjct: 89 LVGDDPWEEFVSSVRGIRILSPSEV 113
>gi|85069285|gb|ABC69714.1| ARF2-like protein [Nicotiana tabacum]
Length = 264
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 86/180 (47%), Gaps = 29/180 (16%)
Query: 434 NNDTLLEQVETGRKTETGTSCRLFGIELIN--HATSSAPSEKVPVSSLTTEGHIISTISA 491
N+ +E G + G+ +LFG++++N + S S+ S ++ +
Sbjct: 99 NSKGNVESDVMGSQPTGGSKLKLFGVDILNGPESPSQHGSKLTHFGSFPAASKTVNFLEQ 158
Query: 492 AADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTT 551
+ + G SD +Q +SC TKV G A+GR++D++
Sbjct: 159 SKSTSGNSD-------------------TQCSRSC-------TKVLKYGCALGRSIDMSR 192
Query: 552 LVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFIC 610
+ GY LI EL+++F +G L +K W + Y D EG+ L+GD PW + MV+++FIC
Sbjct: 193 VKGYGELISELDKLFGFEGSLLDGSKDWHVTYQDREGNTKLLGDYPWSDSQAMVRKMFIC 252
>gi|297725437|ref|NP_001175082.1| Os07g0183600 [Oryza sativa Japonica Group]
gi|255677566|dbj|BAH93810.1| Os07g0183600 [Oryza sativa Japonica Group]
Length = 354
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 117/256 (45%), Gaps = 35/256 (13%)
Query: 57 EPTTP-DPCPADSPRPKVH----SFSKVLTASDTSTHGGFSVL--RKHATECLPPLDMNQ 109
+P P DP P+ P+V SF K LT +D + ++ R+ A LP L +N+
Sbjct: 13 QPQAPADPGPSS---PQVQTTLVSFVKPLTCTDAVKNRYRFIVPKRETAMGVLPQLQLNE 69
Query: 110 STPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG-ENG 168
P L KD+HG EW + ++ H+L++GW F + RLV GD VF+R ++G
Sbjct: 70 HVP---LYIKDMHGKEWVINYTWKEY--THMLSSGWIKFANANRLVTGDNVVFMRSMDSG 124
Query: 169 ELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYY-KPRTSQFIISL 227
E ++G+R R P SV V+ A + V Y + +F++
Sbjct: 125 ERYMGLR---RTLKPEPVSVDE-------VIEAVWRAARLEPFEVTYLSRQDGDEFVVPC 174
Query: 228 NKYLEAVNNKFAVGMRYKMRFEGEDS--PERRFSGTVVGVEDFSPHWKDSKWRSLKVQWD 285
A+ KF GM + E+ P G V+ +E+++ S WR ++V+W
Sbjct: 175 GIVHNALRAKFTPGMVVNFVWAVEEDRLPNVGPQGKVIAIENYA----TSIWRMIQVEWP 230
Query: 286 EPASITRPDRVSPWEI 301
A + R V+ W+I
Sbjct: 231 SCAGMNR--YVNFWQI 244
>gi|284811185|gb|ADB96331.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 183
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 50/70 (71%), Gaps = 6/70 (8%)
Query: 272 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPP 331
W DS+WRSLKVQWDEP+S+ RP+RVSPWE+EP VA++TP+ +NKRPR P
Sbjct: 1 WHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQPPQRNKRPR------P 54
Query: 332 LDLPSAASAP 341
LPS A+ P
Sbjct: 55 PGLPSPATGP 64
>gi|238013004|gb|ACR37537.1| unknown [Zea mays]
Length = 82
Score = 80.5 bits (197), Expect = 3e-12, Method: Composition-based stats.
Identities = 35/62 (56%), Positives = 51/62 (82%), Gaps = 1/62 (1%)
Query: 565 MFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSK 623
MFD +G+L + ++ W+IVYTDDEGDMMLVGDDPW EFC++V++I+I + ++V+KM+ S
Sbjct: 1 MFDFEGELVSGSQNWQIVYTDDEGDMMLVGDDPWEEFCSIVRKIYIYTKEEVQKMNSKSA 60
Query: 624 LP 625
P
Sbjct: 61 AP 62
>gi|218199196|gb|EEC81623.1| hypothetical protein OsI_25146 [Oryza sativa Indica Group]
Length = 796
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 133/291 (45%), Gaps = 60/291 (20%)
Query: 21 LPSKI-LCRVVNIHLMAEQETDEVYAQITLLPEPSQN--EPTTP-DPCPADSPRPK--VH 74
LP ++ LC+V + L A + +E++A ++L+P +P P DP P+ SP+ K +
Sbjct: 446 LPGRVFLCKVTAVRLDATR--NELFATMSLIPVARDQAIQPQAPADPGPS-SPQVKTTLV 502
Query: 75 SFSKVLTASDTSTHGGFSVL--RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIF 132
SF K LT +D + ++ R+ A LP L +N+ P L KD+HG EW + +
Sbjct: 503 SFVKPLTCTDAVKNRYRFIVPKREAAMGVLPQLQLNEHVP---LYIKDMHGKEWVINYTW 559
Query: 133 RGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG-ENGELHVGVRCLARQQSSMPSSVISS 191
+ H+L++GW F + RLV GD VF+R ++GE ++G+R R P SV
Sbjct: 560 KEY--THMLSSGWIKFANANRLVTGDNVVFMRSMDSGERYMGLR---RTLKPEPVSVDE- 613
Query: 192 QSMHLGVLATASHAVATQTMFVVYY-KPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEG 250
V+ A + V Y + +F++ L
Sbjct: 614 ------VIEAVWRAARLEPFEVAYLSRQDGDEFVVPL----------------------- 644
Query: 251 EDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEI 301
P G V+ +E+++ S WR ++V+W A + R V+ W+I
Sbjct: 645 ---PNVGPQGKVIAIENYA----TSIWRMIQVEWPSCAGMNR--YVNFWQI 686
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 69/159 (43%), Gaps = 9/159 (5%)
Query: 22 PSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEP----TTPDPCPADSPRPKVHSFS 77
P LC V + L A+ T+E YA ITL P + P A + ++ F
Sbjct: 66 PRVFLCTVAAVRLRADALTNEAYADITLDPVADHDVPRLLPAPAPAAAAGGQQQQLRYFV 125
Query: 78 KVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPR 137
K L +SD F+V A + PPL + Q L+ KDL G F + G
Sbjct: 126 KTLMSSDAEYRDRFAVPMDVAKDVFPPL--VDAKAVQPLIVKDLQGSPMTFDYGRNGN-- 181
Query: 138 RHLLTTGWSTFVTSKRLVAGDTFVFL-RGENGELHVGVR 175
R L W F V GD+ +F+ R ++ EL+VGVR
Sbjct: 182 RVTLAKVWKKFRDDMDFVDGDSVIFMRRRDDDELYVGVR 220
>gi|301793233|emb|CBA12007.1| putative auxin response factor 10/16/17, partial [Cycas rumphii]
Length = 528
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 87/176 (49%), Gaps = 11/176 (6%)
Query: 156 AGDTF-VFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 214
GD F VFL GE S S +S++S V+ +A+ A A Q VV
Sbjct: 15 GGDNFSVFLGGEMKSSGNTNNNTNSNGFSRNRSKVSAKS----VVESATLAAAGQPFEVV 70
Query: 215 YYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP- 270
YY PR S +F + A+ +++ GMR+KM FE EDS F GT+ V+ P
Sbjct: 71 YY-PRASTPEFCVKAQAVDAALRVQWSAGMRFKMAFETEDSSRISWFMGTISSVQLADPV 129
Query: 271 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLS 326
W +S WR L+V WDEP + RVSPW +E V+S P + P K+ R++
Sbjct: 130 CWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE-VVSSMPPIQLTPFTLPKKKLRVT 184
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 535 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 594
KV M+ VGR LDL+ Y+ L L +MF I+ +L + ++Y D +G + GD
Sbjct: 446 KVFMESEDVGRTLDLSLFSSYEQLYHRLAKMFGIE-ELELSNR--VLYKDTDGTVRHTGD 502
Query: 595 DPWHEFCNMVKRIFICSSQDVKKMS 619
+P+ +F V+R+ I S M
Sbjct: 503 EPYRDFMKTVRRLTILSDSSSDNMG 527
>gi|218199195|gb|EEC81622.1| hypothetical protein OsI_25144 [Oryza sativa Indica Group]
Length = 722
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 129/301 (42%), Gaps = 44/301 (14%)
Query: 18 LFRLPSKI---LCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVH 74
L RLP I C V ++ L + E+ E YA I+LLP S ++ T PA P
Sbjct: 61 LSRLPDPIHPVPCTVADLVLDVDAESGEAYATISLLPG-SHDDTTARRQVPAHG-EPGFR 118
Query: 75 SFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG 134
F K L+ +D +++ VL A LPPLD+ + +DL G + F HI+
Sbjct: 119 FFEKQLSPADVTSNA--LVLPAGAEHVLPPLDIAAYQTARLFDVRDLRGKRFEFVHIWDK 176
Query: 135 -----QPRRHLL-------TTGWSTFVTSKRLVAGDTFVFLR--------GENGELHVGV 174
+ R++L GW FV +KRL DT VF+R +GEL VGV
Sbjct: 177 NIWDKKRCRYMLGDLGVNDNDGWRGFVKAKRLATRDTVVFMRRGGGGGDGDGDGELLVGV 236
Query: 175 RCLARQQSS-MPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYL 231
R R + P + V++ + T F V Y PR T +F++S ++Y+
Sbjct: 237 RRAPRARGGHHPRPGVEDNK----VVSEVWLEMQGVTPFEVTYYPREGTFEFVVSRDEYI 292
Query: 232 E---AVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPA 288
+ F G +R + SGTV + P WR L+V WD+ A
Sbjct: 293 GFSFSPFYPFVPGTTVHLRMNPLQIAQ-SISGTVRTFDHLRP------WRMLEVDWDQAA 345
Query: 289 S 289
S
Sbjct: 346 S 346
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 120/291 (41%), Gaps = 55/291 (18%)
Query: 40 TDEVYAQITLLPEPS----QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGG----- 90
+D+ YA I+L P + P DP + F K L+ SD + +GG
Sbjct: 406 SDDSYAMISLFPGDCYVTHRPLPAARDPVGGQR---EFCFFDKKLSPSDAAANGGGSGAL 462
Query: 91 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQP--RR---HLLTTGW 145
F + + A E + P +L +L G W F H + RR H L GW
Sbjct: 463 FVIPKPSAAEHVLPR-------IPDLRVTNLQGGRWEFGHTWSDADTDRRSSSHTLAAGW 515
Query: 146 STFVTSKRLVAGDTFVFLRGE-NGELHVGVRCLARQQSSMPSSVISSQSMHLGVL-ATAS 203
S FV +KRL GDT +F+R GE VGVR + H G+L
Sbjct: 516 SAFVKAKRLCVGDTVIFMRRRPGGEPIVGVR----------------RKPHGGMLVGIPD 559
Query: 204 HAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 263
VA + V T++F++ + +E + A G R ++ +D RR V
Sbjct: 560 KHVADAWLDAV----GTAEFVVRREE-VEG-SPPLAPGTRVRLLMNPDDV-RRRSQPPVY 612
Query: 264 G-VEDFSPHWKDSKWRSLKVQWDE--PASITRPDRVSPWEIEPFVASATPN 311
G V D SKWR L+V WD P + T RV+ W+++P + P
Sbjct: 613 GTVRDVH---SRSKWRMLEVDWDRDSPLAPTMNRRVNSWQVQPVQLALPPQ 660
>gi|168022407|ref|XP_001763731.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684975|gb|EDQ71373.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 269
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 58/102 (56%), Gaps = 1/102 (0%)
Query: 74 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 133
H F K +T SD + ++HA C P LD++ ++P Q L +D+ G WRF++ +
Sbjct: 163 HLFDKAVTPSDVGKLNRLVIPKQHAERCFP-LDLSANSPGQTLSFEDVSGKHWRFRYSYW 221
Query: 134 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR 175
+ ++LT GWS FV K+L AGD F RG + EL++ R
Sbjct: 222 NSSQSYVLTKGWSRFVKEKKLDAGDIVSFERGPSQELYIDFR 263
>gi|302759398|ref|XP_002963122.1| hypothetical protein SELMODRAFT_438333 [Selaginella moellendorffii]
gi|300169983|gb|EFJ36585.1| hypothetical protein SELMODRAFT_438333 [Selaginella moellendorffii]
Length = 289
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMM 590
RS TKV G ++GR+L++ Y L EL MF ++GQL + W++VY D++GD++
Sbjct: 182 RSYTKVLKLG-SIGRSLNIARFNSYAELRSELARMFGLEGQLDQSSHWQLVYMDNDGDIL 240
Query: 591 LVGDDPWHEFCNMVKRIFICSSQDV 615
LVGDD W EF + V+ I I S +V
Sbjct: 241 LVGDDRWEEFVSSVRGIRIISPSEV 265
>gi|302796880|ref|XP_002980201.1| hypothetical protein SELMODRAFT_444454 [Selaginella moellendorffii]
gi|300151817|gb|EFJ18461.1| hypothetical protein SELMODRAFT_444454 [Selaginella moellendorffii]
Length = 289
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMM 590
RS TKV G ++GR+L++ Y L EL MF ++GQL + W++VY D++GD++
Sbjct: 182 RSYTKVLKLG-SIGRSLNIARFNSYAELRSELARMFGLEGQLDQSSHWQLVYMDNDGDIL 240
Query: 591 LVGDDPWHEFCNMVKRIFICSSQDV 615
LVGDD W EF V+ I I S +V
Sbjct: 241 LVGDDRWEEFVTSVRGIRIISPSEV 265
>gi|353441048|gb|AEQ94108.1| putative auxin response transcription factor 1 [Elaeis
guineensis]
Length = 58
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/49 (75%), Positives = 43/49 (87%)
Query: 1 MEQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITL 49
MEQLEASTNQ L+Q +PLF LPSKILCRVV++ L AE +TDEVYAQIT+
Sbjct: 8 MEQLEASTNQGLDQHMPLFNLPSKILCRVVHVQLRAEPDTDEVYAQITI 56
>gi|2708482|gb|AAB92475.1| IAA25 [Arabidopsis thaliana]
Length = 476
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 545 RALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEFCN 602
R D+ GYD L +L MF I+GQL + W++VY D E D++LVGDDPW EF N
Sbjct: 362 RMRDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHENDILLVGDDPWEEFVN 421
Query: 603 MVKRIFICSSQDVKKMS 619
V+ I I SS +V++MS
Sbjct: 422 CVQSIKILSSAEVQQMS 438
>gi|224062579|ref|XP_002300855.1| predicted protein [Populus trichocarpa]
gi|222842581|gb|EEE80128.1| predicted protein [Populus trichocarpa]
Length = 201
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 57/92 (61%), Gaps = 3/92 (3%)
Query: 529 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDE 586
S R+ KV G + GR+LD++ YD L EL +F ++GQL R + W++V+ D E
Sbjct: 46 STRTFVKVHKSG-SYGRSLDISKFSSYDELRSELARLFCLEGQLEDRQRSGWQLVFVDRE 104
Query: 587 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 618
D++L+GDDPW EF N V I I S +V++M
Sbjct: 105 NDVLLLGDDPWQEFVNNVWYIKILSPLEVQQM 136
>gi|413934439|gb|AFW68990.1| hypothetical protein ZEAMMB73_088581 [Zea mays]
Length = 510
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 544 GRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEFC 601
GR+LD+T Y L EL +F ++GQL R+ W++V+ D E D++LVGDDPW EF
Sbjct: 389 GRSLDITRFSSYHELRRELGRLFGLEGQLEDPLRSGWQLVFVDREEDVLLVGDDPWQEFV 448
Query: 602 NMVKRIFICSSQDVKKM 618
+ V I I S Q+V++M
Sbjct: 449 STVSCIKILSPQEVQQM 465
>gi|297740767|emb|CBI30949.3| unnamed protein product [Vitis vinifera]
Length = 160
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 56/91 (61%), Gaps = 3/91 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 588
R+ KV G + GR+LD+T Y L EL MF ++GQL R+ W++V+ D E D
Sbjct: 27 RTFVKVYKSG-SFGRSLDITKFSSYHELRGELARMFGLEGQLEDPRRSGWQLVFVDREND 85
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++L+GDDPW EF N V I I S Q+V++M
Sbjct: 86 VLLLGDDPWPEFVNSVWCIKILSLQEVQQMG 116
>gi|118488187|gb|ABK95913.1| unknown [Populus trichocarpa]
Length = 533
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 542 AVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGDMMLVGDDPWHE 599
+VGR+LD++ Y L EL +MF I+G+L R+ W++V+ D E D++L+GDDPW
Sbjct: 434 SVGRSLDISRFSSYHELRGELAQMFGIEGKLENPHRSGWQLVFVDRENDVLLLGDDPWEL 493
Query: 600 FCNMVKRIFICSSQDVKKMS 619
F N V I I S +DV K+
Sbjct: 494 FVNNVWYIKILSPEDVLKLG 513
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 242 MRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWE 300
MR++M FE E+S RR+ GT+ G+ D P W +S WRS+KV WDE + R RVS WE
Sbjct: 1 MRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWE 60
Query: 301 IEPFV 305
IEP
Sbjct: 61 IEPLT 65
>gi|302800377|ref|XP_002981946.1| hypothetical protein SELMODRAFT_115320 [Selaginella moellendorffii]
gi|302802339|ref|XP_002982925.1| hypothetical protein SELMODRAFT_117335 [Selaginella moellendorffii]
gi|300149515|gb|EFJ16170.1| hypothetical protein SELMODRAFT_117335 [Selaginella moellendorffii]
gi|300150388|gb|EFJ17039.1| hypothetical protein SELMODRAFT_115320 [Selaginella moellendorffii]
Length = 93
Score = 74.7 bits (182), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/74 (44%), Positives = 46/74 (62%)
Query: 542 AVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFC 601
++GRA+D+ Y L EL MF + GQL R W++V+ D E D++LVGDDPW EF
Sbjct: 7 SIGRAVDVARFKNYVELRAELSRMFGLDGQLDQRNGWQLVFVDKENDLLLVGDDPWEEFV 66
Query: 602 NMVKRIFICSSQDV 615
+ V+ I I S +V
Sbjct: 67 SSVRGIRILSPSEV 80
>gi|168053340|ref|XP_001779095.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669547|gb|EDQ56132.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 825
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMM 590
RS KV G ++ RA+D+ Y L EL MF++ GQL W++V+TD+E D++
Sbjct: 717 RSYIKVYKLG-SITRAVDVNRFKDYTELRCELARMFNLDGQLDPTVGWQLVFTDNEDDLL 775
Query: 591 LVGDDPWHEFCNMVKRIFICSSQDV 615
LVGDDPW EF V+ I I + +V
Sbjct: 776 LVGDDPWDEFVRNVRGIRILTPAEV 800
>gi|170677558|gb|ACB30851.1| ARF6, partial [Arabidopsis thaliana]
Length = 113
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Query: 534 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMML 591
KV G + GR+LD++ Y L EL MF ++GQL R+ W++V+ D E D++L
Sbjct: 7 VKVYKSG-SFGRSLDISKFSSYHELRSELARMFGLEGQLENPVRSGWQLVFVDRENDVLL 65
Query: 592 VGDDPWHEFCNMVKRIFICSSQDVKKMS 619
+GDDPW EF + V I I S Q+V++M
Sbjct: 66 LGDDPWPEFVSSVWCIKILSPQEVQQMG 93
>gi|224070983|ref|XP_002303315.1| predicted protein [Populus trichocarpa]
gi|222840747|gb|EEE78294.1| predicted protein [Populus trichocarpa]
Length = 338
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 62/127 (48%), Gaps = 23/127 (18%)
Query: 519 ESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD----------- 567
ESQ+K + K+ M+GV +GR +DL Y+ L ++E+F
Sbjct: 204 ESQNKPAGTCKKGLFVKINMEGVPIGRKVDLKAYDSYEKLSTAVDELFRGLLAAQRDSSC 263
Query: 568 ------------IKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDV 615
I G L ++++VY D+EGD MLVGD PWH F + VKR+ + S +V
Sbjct: 264 NGIMNKQEGEKAIMGVLDGSGEYKLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSEV 323
Query: 616 KKMSPGS 622
++ GS
Sbjct: 324 SALNLGS 330
>gi|326518498|dbj|BAJ88278.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 151
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 64/107 (59%), Gaps = 4/107 (3%)
Query: 10 QELNQRIPLF-RLPSKILCRVVNIHLMAEQETDEVYAQITLLP--EPSQNEPTTPDPCPA 66
+E++ +IP + LP +++C++ N+ + A+ TDEVYAQ+TL P Q EP P
Sbjct: 46 KEVDAQIPNYPNLPPRLICQLHNVMMHADAGTDEVYAQMTLQPLSPEEQKEPFLPIELGG 105
Query: 67 DSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPT 113
S +P + F K LT S+ STHGGFS+ R+ A + PPLD + P
Sbjct: 106 ASKQP-TNYFYKTLTTSERSTHGGFSLPRRSAEKVFPPLDFSLQPPC 151
>gi|170677526|gb|ACB30835.1| ARF6, partial [Arabidopsis thaliana]
gi|170677528|gb|ACB30836.1| ARF6, partial [Arabidopsis thaliana]
gi|170677530|gb|ACB30837.1| ARF6, partial [Arabidopsis thaliana]
gi|170677532|gb|ACB30838.1| ARF6, partial [Arabidopsis thaliana]
gi|170677534|gb|ACB30839.1| ARF6, partial [Arabidopsis thaliana]
gi|170677536|gb|ACB30840.1| ARF6, partial [Arabidopsis thaliana]
gi|170677538|gb|ACB30841.1| ARF6, partial [Arabidopsis thaliana]
gi|170677540|gb|ACB30842.1| ARF6, partial [Arabidopsis thaliana]
gi|170677542|gb|ACB30843.1| ARF6, partial [Arabidopsis thaliana]
gi|170677544|gb|ACB30844.1| ARF6, partial [Arabidopsis thaliana]
gi|170677546|gb|ACB30845.1| ARF6, partial [Arabidopsis thaliana]
gi|170677548|gb|ACB30846.1| ARF6, partial [Arabidopsis thaliana]
gi|170677550|gb|ACB30847.1| ARF6, partial [Arabidopsis thaliana]
gi|170677552|gb|ACB30848.1| ARF6, partial [Arabidopsis thaliana]
gi|170677554|gb|ACB30849.1| ARF6, partial [Arabidopsis thaliana]
gi|170677556|gb|ACB30850.1| ARF6, partial [Arabidopsis thaliana]
gi|170677560|gb|ACB30852.1| ARF6, partial [Arabidopsis thaliana]
gi|170677562|gb|ACB30853.1| ARF6, partial [Arabidopsis thaliana]
gi|170677564|gb|ACB30854.1| ARF6, partial [Arabidopsis thaliana]
gi|170677566|gb|ACB30855.1| ARF6, partial [Arabidopsis thaliana]
gi|170677568|gb|ACB30856.1| ARF6, partial [Arabidopsis thaliana]
gi|170677570|gb|ACB30857.1| ARF6, partial [Arabidopsis thaliana]
gi|170677572|gb|ACB30858.1| ARF6, partial [Arabidopsis thaliana]
Length = 113
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Query: 534 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMML 591
KV G + GR+LD++ Y L EL MF ++GQL R+ W++V+ D E D++L
Sbjct: 7 VKVYKSG-SFGRSLDISKFSSYHELRSELARMFGLEGQLEDPVRSGWQLVFVDRENDVLL 65
Query: 592 VGDDPWHEFCNMVKRIFICSSQDVKKMS 619
+GDDPW EF + V I I S Q+V++M
Sbjct: 66 LGDDPWPEFVSSVWCIKILSPQEVQQMG 93
>gi|224103213|ref|XP_002334077.1| predicted protein [Populus trichocarpa]
gi|222869513|gb|EEF06644.1| predicted protein [Populus trichocarpa]
Length = 163
Score = 72.0 bits (175), Expect = 8e-10, Method: Composition-based stats.
Identities = 39/91 (42%), Positives = 57/91 (62%), Gaps = 3/91 (3%)
Query: 530 NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEG 587
+R+ KV G + GR+LD+T Y+ L EL MF ++GQL R+ W++V+ D E
Sbjct: 26 SRTFVKVYKSG-SFGRSLDITKFSNYNELRSELAFMFGLEGQLEDPLRSGWQLVFIDREN 84
Query: 588 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 618
D++L+GD PW EF N V I I S Q+V++M
Sbjct: 85 DVLLLGDGPWPEFVNSVWCIKILSPQEVQQM 115
>gi|168059962|ref|XP_001781968.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666541|gb|EDQ53192.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 139
Score = 72.0 bits (175), Expect = 9e-10, Method: Composition-based stats.
Identities = 36/85 (42%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMM 590
RS KV G ++ RA+D+ Y L EL MF++ GQL + W++V+TD+E D++
Sbjct: 31 RSYIKVYKLG-SITRAVDVNRFKDYTELRCELARMFNLDGQLDPKVGWQLVFTDNEDDLL 89
Query: 591 LVGDDPWHEFCNMVKRIFICSSQDV 615
LVGDDPW EF V+ I I + +V
Sbjct: 90 LVGDDPWEEFVRNVRGIRILTPAEV 114
>gi|357513517|ref|XP_003627047.1| Auxin-responsive protein IAA18 [Medicago truncatula]
gi|355521069|gb|AET01523.1| Auxin-responsive protein IAA18 [Medicago truncatula]
Length = 271
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 55/112 (49%), Gaps = 22/112 (19%)
Query: 534 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF----------------------DIKGQ 571
K+ M GV +GR +D+ Y+ L ++++F +KG
Sbjct: 158 VKINMDGVPIGRKIDINAYDSYEKLSSAVDDLFRGLLEEINLSHGINKKQEEEDTGMKGS 217
Query: 572 LHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSK 623
L ++ +VY D+EGD MLVGD PWH F + VKR+ + S D+ + GSK
Sbjct: 218 LTGSGEYTLVYEDNEGDKMLVGDVPWHMFVSTVKRLRVSKSSDLPAFNIGSK 269
>gi|226501382|ref|NP_001147149.1| IAA16 - auxin-responsive Aux/IAA family member [Zea mays]
gi|195607742|gb|ACG25701.1| IAA16 - auxin-responsive Aux/IAA family member [Zea mays]
Length = 228
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 49/102 (48%), Gaps = 16/102 (15%)
Query: 534 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF----------------DIKGQLHTRTK 577
KV M GV +GR LDL GYD L ++ +F + G L+ +
Sbjct: 116 VKVNMDGVPIGRKLDLGGHAGYDTLTAAVDHLFRGLLAAQTSGPDGERQAVAGILNGGGE 175
Query: 578 WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
+ +VY DDEGD MLVGD PW F +R+ + S D+ S
Sbjct: 176 YTLVYEDDEGDQMLVGDVPWQMFAATARRLRVLRSSDLNPSS 217
>gi|356556539|ref|XP_003546582.1| PREDICTED: auxin-responsive protein IAA26-like [Glycine max]
Length = 320
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 55/113 (48%), Gaps = 23/113 (20%)
Query: 534 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD-----------------------IKG 570
K+ M GV +GR +DL Y++L ++E+F I G
Sbjct: 197 VKINMDGVPIGRKVDLNAYDSYENLSSAVDELFRGLLAAQRDSSAGGVHNKQEEEKAITG 256
Query: 571 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSK 623
L ++ +VY D+EGD MLVGD PWH F + VKR+ + S ++ + GSK
Sbjct: 257 LLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSELSAFTLGSK 309
>gi|295918075|gb|ADG60256.1| ARF8-like protein [Nicotiana tabacum]
Length = 119
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 542 AVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGDMMLVGDDPWHE 599
GR+LD+T Y L EL +MF I+G L R+ W++V+ D E D++L+GDDPW
Sbjct: 2 VCGRSLDITQFHSYHELRRELGQMFGIEGFLEDPQRSGWQLVFVDRENDILLLGDDPWEA 61
Query: 600 FCNMVKRIFICSSQDVKKMS 619
F N V I I S +DV+K+
Sbjct: 62 FVNNVWYIKILSPEDVQKLG 81
>gi|297743183|emb|CBI36050.3| unnamed protein product [Vitis vinifera]
Length = 364
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 54/112 (48%), Gaps = 23/112 (20%)
Query: 534 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF-----------------------DIKG 570
K+ M GV +GR +DLT Y+ L ++E+F I G
Sbjct: 240 VKINMDGVPIGRKVDLTAYDSYEKLSSAVDELFRGLLAAQRDSSAGGIQTKHEEEKTITG 299
Query: 571 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 622
L ++ +VY D+EGD +LVGD PWH F N VKR+ + S ++ + GS
Sbjct: 300 LLDGSGEYTLVYEDNEGDRVLVGDVPWHMFVNTVKRLRVLKSSELSALCLGS 351
>gi|359482888|ref|XP_002283588.2| PREDICTED: auxin-responsive protein IAA26-like [Vitis vinifera]
Length = 364
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 54/111 (48%), Gaps = 23/111 (20%)
Query: 535 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMF-----------------------DIKGQ 571
K+ M GV +GR +DLT Y+ L ++E+F I G
Sbjct: 241 KINMDGVPIGRKVDLTAYDSYEKLSSAVDELFRGLLAAQRDSSAGGIQTKHEEEKTITGL 300
Query: 572 LHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 622
L ++ +VY D+EGD +LVGD PWH F N VKR+ + S ++ + GS
Sbjct: 301 LDGSGEYTLVYEDNEGDRVLVGDVPWHMFVNTVKRLRVLKSSELSALCLGS 351
>gi|224085429|ref|XP_002307573.1| predicted protein [Populus trichocarpa]
gi|222857022|gb|EEE94569.1| predicted protein [Populus trichocarpa]
Length = 137
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 53/89 (59%), Gaps = 3/89 (3%)
Query: 529 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 586
S R+ KV G + GR+LD++ YD L EL +F ++G L R+ W++V+ D E
Sbjct: 50 STRTFVKVHKSG-SYGRSLDISKFSSYDELRSELARLFCLEGLLEDPQRSGWQLVFGDRE 108
Query: 587 GDMMLVGDDPWHEFCNMVKRIFICSSQDV 615
D++L+GDDPW EF N V I I S +V
Sbjct: 109 NDVLLLGDDPWQEFVNNVWYIKILSPLEV 137
>gi|304308209|gb|ADL70417.1| truncated auxin response factor 13 [Arabidopsis thaliana]
Length = 63
Score = 70.5 bits (171), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 47/89 (52%), Gaps = 26/89 (29%)
Query: 189 ISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRF 248
IS+ M GV+A+ +A T+ MF V YKPR M+F
Sbjct: 1 ISANCMQHGVIASVVNAFKTKCMFNVVYKPR--------------------------MQF 34
Query: 249 EGEDSPERRFSGTVVGVEDFSPHWKDSKW 277
EG+D E+R+ GT++GV D SPHWKDS+W
Sbjct: 35 EGKDFSEKRYDGTIIGVNDMSPHWKDSEW 63
>gi|226531844|ref|NP_001150765.1| IAA16 - auxin-responsive Aux/IAA family member [Zea mays]
gi|195641652|gb|ACG40294.1| IAA16 - auxin-responsive Aux/IAA family member [Zea mays]
Length = 234
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 49/102 (48%), Gaps = 16/102 (15%)
Query: 534 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF----------------DIKGQLHTRTK 577
KV M GV +GR LDL GYD L ++ +F + G L+ +
Sbjct: 122 VKVNMDGVPIGRKLDLGGHAGYDTLTAAVDHLFRGLLSAQTSGPGGERQAVAGILNGGGE 181
Query: 578 WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
+ +VY DDEGD MLVGD PW F +R+ + S D+ S
Sbjct: 182 YTLVYEDDEGDQMLVGDVPWQMFAATARRLRVLRSSDLNPSS 223
>gi|302762190|ref|XP_002964517.1| hypothetical protein SELMODRAFT_405821 [Selaginella moellendorffii]
gi|300168246|gb|EFJ34850.1| hypothetical protein SELMODRAFT_405821 [Selaginella moellendorffii]
Length = 335
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Query: 543 VGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEF 600
+GRALDL GY L++EL+ +F I L+ ++W+ VY D+EGDM+LVGDDPW F
Sbjct: 158 MGRALDLRKFRGYRELLEELQHLFGIDKNLNG-SEWQAVYVDNEGDMLLVGDDPWGVF 214
>gi|356550493|ref|XP_003543621.1| PREDICTED: auxin-responsive protein IAA26-like [Glycine max]
Length = 346
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 55/113 (48%), Gaps = 23/113 (20%)
Query: 534 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD-----------------------IKG 570
K+ M GV +GR +DL Y++L ++E+F I G
Sbjct: 223 VKINMDGVPIGRKVDLNAYDSYENLSSAVDELFRGLLAAQRDSSAGGVHNKQEEEKAITG 282
Query: 571 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSK 623
L ++ +VY D+EGD MLVGD PWH F + VKR+ + S ++ + GSK
Sbjct: 283 LLDGSGEFTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSELSAFTLGSK 335
>gi|413944729|gb|AFW77378.1| IAA16-auxin-responsive Aux/IAA family member [Zea mays]
Length = 234
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 49/102 (48%), Gaps = 16/102 (15%)
Query: 534 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF----------------DIKGQLHTRTK 577
KV M GV +GR LDL GYD L ++ +F + G L+ +
Sbjct: 122 VKVNMDGVPIGRKLDLGGHAGYDTLTAAVDHLFRGLLSAQTSGPGGERQAVAGILNGGGE 181
Query: 578 WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
+ +VY DDEGD MLVGD PW F +R+ + S D+ S
Sbjct: 182 YTLVYEDDEGDQMLVGDVPWQMFAATARRLRVLRSSDLNPSS 223
>gi|302819737|ref|XP_002991538.1| hypothetical protein SELMODRAFT_133669 [Selaginella moellendorffii]
gi|300140740|gb|EFJ07460.1| hypothetical protein SELMODRAFT_133669 [Selaginella moellendorffii]
Length = 262
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Query: 74 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 133
H F K +T SD + ++HA C P LD++ + L +D+ G WRF++ +
Sbjct: 157 HLFDKAVTPSDVGKLNRLVIPKQHAERCFP-LDLSANEKGLLLSFEDITGKVWRFRYSYW 215
Query: 134 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR 175
+ ++LT GWS FV K+L AGD F RG EL++ R
Sbjct: 216 NSSQSYVLTKGWSRFVKEKKLDAGDIVTFERGPGQELYISWR 257
>gi|302141887|emb|CBI19090.3| unnamed protein product [Vitis vinifera]
Length = 320
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 71/145 (48%), Gaps = 10/145 (6%)
Query: 164 RGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM-FVVYYKPR--T 220
R N EL +GVR AR + S S + +A Q M F V Y PR +
Sbjct: 3 RNSNSELFIGVRRDARWNRNGERS---SSGRVRAEEVAVAAELAAQGMPFEVVYYPRVGS 59
Query: 221 SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTV--VGVEDFSPHWKDSKW 277
S F++ EA++ + GMR KM E EDS + F GTV V D P W+ S W
Sbjct: 60 SDFVVKAEVVEEALSVFWTGGMRVKMAMETEDSSKTSLFQGTVSSATVMDNGP-WRGSLW 118
Query: 278 RSLKVQWDEPASITRPDRVSPWEIE 302
R L+V WDEP + RVSPW++E
Sbjct: 119 RMLQVTWDEPEVLQNVMRVSPWQVE 143
>gi|302794600|ref|XP_002979064.1| hypothetical protein SELMODRAFT_110104 [Selaginella moellendorffii]
gi|300153382|gb|EFJ20021.1| hypothetical protein SELMODRAFT_110104 [Selaginella moellendorffii]
Length = 261
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Query: 74 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 133
H F K +T SD + ++HA C P LD++ + L +D+ G WRF++ +
Sbjct: 156 HLFDKAVTPSDVGKLNRLVIPKQHAERCFP-LDLSANEKGLLLSFEDITGKVWRFRYSYW 214
Query: 134 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR 175
+ ++LT GWS FV K+L AGD F RG EL++ R
Sbjct: 215 NSSQSYVLTKGWSRFVKEKKLDAGDIVTFERGPGQELYISWR 256
>gi|255549816|ref|XP_002515959.1| Auxin-responsive protein IAA6, putative [Ricinus communis]
gi|223544864|gb|EEF46379.1| Auxin-responsive protein IAA6, putative [Ricinus communis]
Length = 320
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 53/105 (50%), Gaps = 20/105 (19%)
Query: 535 KVQMQGVAVGRALDLTTLVGYDHL---IDEL-----------------EEMFDIKGQLHT 574
K+ M GV +GR +DL Y+ L +DEL EE I G L
Sbjct: 214 KINMDGVPIGRKVDLQAYDSYEKLSIAVDELFRGLLAAQRDSSAGTKQEEEKAITGVLDG 273
Query: 575 RTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++ +VY D+EGD MLVGD PWH F + VKR+ + S +V +S
Sbjct: 274 SGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSEVSALS 318
>gi|147798046|emb|CAN73899.1| hypothetical protein VITISV_004904 [Vitis vinifera]
Length = 559
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 61/129 (47%), Gaps = 29/129 (22%)
Query: 535 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMF-----------------------DIKGQ 571
K+ M GV +GR +DLT Y+ L ++E+F I G
Sbjct: 393 KINMDGVPIGRKVDLTAYDSYEKLSSAVDELFRGLLAAQRDSSAGGIQTKQEEEKTITGL 452
Query: 572 LHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS-----PGSKLP- 625
L ++ +VY D+EGD +LVGD PWH F N VKR+ + S ++ + P S +P
Sbjct: 453 LDGSGEYTLVYEDNEGDRVLVGDVPWHMFVNTVKRLRVLKSSELSALCREFFDPHSLIPH 512
Query: 626 MFSIEGEDI 634
+F + G I
Sbjct: 513 IFGLNGGPI 521
>gi|297836890|ref|XP_002886327.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297332167|gb|EFH62586.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 216
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 75/176 (42%), Gaps = 65/176 (36%)
Query: 135 QPRRHLLTTGWS--TFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQ 192
QPR HL+T GWS T V+ K L + D +FL
Sbjct: 66 QPRWHLITIGWSILTIVSQKNLTSCDVVLFL----------------------------- 96
Query: 193 SMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGED 252
A+HA +F+I KY+ ++ N +G R+ MRFE D
Sbjct: 97 ---------ATHA----------------EFVIPYEKYITSIRNPICIGTRFIMRFEMND 131
Query: 253 SPERRFSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASIT-RPDRVSPWEIEPFVA 306
SPE R +G V GV D P+ W +SKW D + ++ +RVS WEI+P V+
Sbjct: 132 SPE-RCAGVVAGVYDLDPYRWPNSKWC------DGMSLVSDHQERVSLWEIDPSVS 180
>gi|168037231|ref|XP_001771108.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677641|gb|EDQ64109.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 160
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 68/121 (56%), Gaps = 7/121 (5%)
Query: 528 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDD 585
+S R+ TKV G +VGR+LD+ Y L EL +MF + + + W+IV+ D+
Sbjct: 27 SSQRTFTKVHKLG-SVGRSLDVRIFNTYAELRKELAKMFHLDCLMEDPPTSGWQIVFVDN 85
Query: 586 EGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGEDI----LLSSDSA 641
E D +L+GDDPW +F N V+ I I S +V ++S + ++ + + L+SSDS
Sbjct: 86 ENDTLLLGDDPWEDFLNCVRSIKILSPSEVTQISQDQLKMLETVPVQHLQPQRLISSDSG 145
Query: 642 E 642
E
Sbjct: 146 E 146
>gi|170677574|gb|ACB30859.1| ARF8, partial [Arabidopsis thaliana]
gi|170677576|gb|ACB30860.1| ARF8, partial [Arabidopsis thaliana]
gi|170677578|gb|ACB30861.1| ARF8, partial [Arabidopsis thaliana]
gi|170677580|gb|ACB30862.1| ARF8, partial [Arabidopsis thaliana]
gi|170677582|gb|ACB30863.1| ARF8, partial [Arabidopsis thaliana]
gi|170677584|gb|ACB30864.1| ARF8, partial [Arabidopsis thaliana]
gi|170677586|gb|ACB30865.1| ARF8, partial [Arabidopsis thaliana]
gi|170677588|gb|ACB30866.1| ARF8, partial [Arabidopsis thaliana]
gi|170677590|gb|ACB30867.1| ARF8, partial [Arabidopsis thaliana]
gi|170677592|gb|ACB30868.1| ARF8, partial [Arabidopsis thaliana]
gi|170677594|gb|ACB30869.1| ARF8, partial [Arabidopsis thaliana]
gi|170677596|gb|ACB30870.1| ARF8, partial [Arabidopsis thaliana]
gi|170677598|gb|ACB30871.1| ARF8, partial [Arabidopsis thaliana]
gi|170677600|gb|ACB30872.1| ARF8, partial [Arabidopsis thaliana]
gi|170677602|gb|ACB30873.1| ARF8, partial [Arabidopsis thaliana]
gi|170677604|gb|ACB30874.1| ARF8, partial [Arabidopsis thaliana]
gi|170677606|gb|ACB30875.1| ARF8, partial [Arabidopsis thaliana]
gi|170677608|gb|ACB30876.1| ARF8, partial [Arabidopsis thaliana]
gi|170677610|gb|ACB30877.1| ARF8, partial [Arabidopsis thaliana]
gi|170677612|gb|ACB30878.1| ARF8, partial [Arabidopsis thaliana]
gi|170677614|gb|ACB30879.1| ARF8, partial [Arabidopsis thaliana]
gi|170677616|gb|ACB30880.1| ARF8, partial [Arabidopsis thaliana]
gi|170677618|gb|ACB30881.1| ARF8, partial [Arabidopsis thaliana]
gi|170677620|gb|ACB30882.1| ARF8, partial [Arabidopsis thaliana]
Length = 130
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 56/87 (64%), Gaps = 3/87 (3%)
Query: 528 TSNRSRTKVQM-QGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTD 584
+SN+++ V++ + +VGR+LD++ Y L +EL +MF I+G L R+ W++V+ D
Sbjct: 42 SSNQTKNFVKVYKSGSVGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVFVD 101
Query: 585 DEGDMMLVGDDPWHEFCNMVKRIFICS 611
E D++L+GDDPW F N V I I S
Sbjct: 102 KENDILLLGDDPWESFVNNVWYIKILS 128
>gi|297808601|ref|XP_002872184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297318021|gb|EFH48443.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 147
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 53/103 (51%)
Query: 518 KESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK 577
KE K+ K+ M+GV +GR ++L+ Y L ++++F K +
Sbjct: 39 KEEMKKRESDEEKELYVKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFSKKDSWDLNRQ 98
Query: 578 WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 620
+ +VY D EGD +LVGD PW F + VKR+ + + + +SP
Sbjct: 99 YTLVYEDTEGDKVLVGDVPWEMFVSTVKRLHVLKTSNASSLSP 141
>gi|224064496|ref|XP_002301505.1| predicted protein [Populus trichocarpa]
gi|222843231|gb|EEE80778.1| predicted protein [Populus trichocarpa]
Length = 91
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 36/58 (62%)
Query: 105 LDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVF 162
LD P + ++AKD+HG W+F+HI+RG PRRHLL TGWS FV K G F
Sbjct: 13 LDYTAEPPEETILAKDVHGETWKFRHIYRGAPRRHLLNTGWSNFVNKKNSWLGTRLCF 70
>gi|15219761|ref|NP_171949.1| auxin-responsive protein IAA12 [Arabidopsis thaliana]
gi|11131318|sp|Q38830.1|IAA12_ARATH RecName: Full=Auxin-responsive protein IAA12; AltName:
Full=Indoleacetic acid-induced protein 12; AltName:
Full=Protein BODENLOS
gi|12083206|gb|AAG48762.1|AF332398_1 auxin-induced protein, IAA12 [Arabidopsis thaliana]
gi|972927|gb|AAC49053.1| IAA12 [Arabidopsis thaliana]
gi|2494122|gb|AAB80631.1| Match to Arabidopsis IAA12 (gb|U18414) [Arabidopsis thaliana]
gi|17529012|gb|AAL38716.1| auxin-induced protein IAA12 [Arabidopsis thaliana]
gi|20465451|gb|AAM20185.1| auxin-induced protein IAA12 [Arabidopsis thaliana]
gi|332189592|gb|AEE27713.1| auxin-responsive protein IAA12 [Arabidopsis thaliana]
Length = 239
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 65/141 (46%), Gaps = 22/141 (15%)
Query: 492 AADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTT 551
A + DG+ + K E K ++V+PK KV M GV +GR +D+
Sbjct: 95 AEEGDGEKKVVKN-DELKDVSMKVNPK---------VQGLGFVKVNMDGVGIGRKVDMRA 144
Query: 552 LVGYDHLIDELEEMF-DIKGQ-----------LHTRTKWEIVYTDDEGDMMLVGDDPWHE 599
Y++L LEEMF + G L + + + Y D EGD MLVGD PW
Sbjct: 145 HSSYENLAQTLEEMFFGMTGTTCREKVKPLRLLDGSSDFVLTYEDKEGDWMLVGDVPWRM 204
Query: 600 FCNMVKRIFICSSQDVKKMSP 620
F N VKR+ I + + ++P
Sbjct: 205 FINSVKRLRIMGTSEASGLAP 225
>gi|297843264|ref|XP_002889513.1| hypothetical protein ARALYDRAFT_470436 [Arabidopsis lyrata subsp.
lyrata]
gi|297335355|gb|EFH65772.1| hypothetical protein ARALYDRAFT_470436 [Arabidopsis lyrata subsp.
lyrata]
Length = 239
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 50/99 (50%), Gaps = 12/99 (12%)
Query: 534 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF-DIKGQ-----------LHTRTKWEIV 581
KV M GV +GR +D+ Y++L LEEMF + G L + + +
Sbjct: 127 VKVNMDGVGIGRKVDMRAHSSYENLAQTLEEMFFGMTGTTSREKVKPLRLLDGSSDFVLT 186
Query: 582 YTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 620
Y D EGD MLVGD PW F N VKR+ I S + ++P
Sbjct: 187 YEDKEGDWMLVGDVPWRMFINSVKRLRIMGSSEASGLAP 225
>gi|125557472|gb|EAZ03008.1| hypothetical protein OsI_25149 [Oryza sativa Indica Group]
Length = 541
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 113/258 (43%), Gaps = 25/258 (9%)
Query: 21 LPSKI-LCRVVNIHLMAEQETDEVYAQITLLPEPSQNEP----TTPDPCPADSPRPKVHS 75
LP +I LC+V ++ L A T+E A I+L+P + + DP PA + + S
Sbjct: 295 LPGRIFLCKVTDVRLGAAA-TNEALATISLVPIAADDHAFQLQAPADPDPAPAQSQSLVS 353
Query: 76 FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQ 135
F K LT +D + + A LP + +N P L KDL G EW F + ++
Sbjct: 354 FVKPLTYTDVTKNRFMVPKDDAAAGVLPHIQLNDDVP---LRIKDLSGKEWAFNYTWKAH 410
Query: 136 PRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMH 195
R + GW F + LV GD VF+R NGE+ + VR + P SV
Sbjct: 411 TR--MFRNGWMEFSNANGLVTGDNAVFMRRGNGEMFMAVR--RTRNRPAPFSVEE----- 461
Query: 196 LGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDS 253
+ A A + F V Y R +F++ + + + +FA GM + ED
Sbjct: 462 ---VIEAVWRAARREPFEVSYCSRQDGDEFVVPRDIVDDGLRARFAPGMAVNFVWAVEDG 518
Query: 254 --PERRFSGTVVGVEDFS 269
P G V+ +E+++
Sbjct: 519 KLPTIGPQGEVISIENYA 536
>gi|224084810|ref|XP_002307409.1| predicted protein [Populus trichocarpa]
gi|222856858|gb|EEE94405.1| predicted protein [Populus trichocarpa]
Length = 336
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 57/107 (53%), Gaps = 9/107 (8%)
Query: 212 FVVYYKPRT---SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTV--VGV 265
F V Y PR S F++ A+ + GMR KM E EDS F GTV G+
Sbjct: 25 FDVVYYPRAGWYSDFVVRAEAVEAALGVFWTAGMRVKMAMETEDSSRMTWFQGTVSGTGL 84
Query: 266 EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL 312
D S W+ S WR L++ WDEP + RVSPW++E FVA+ TP L
Sbjct: 85 PD-SGAWRGSPWRMLQITWDEPEVLQNAKRVSPWQVE-FVAT-TPQL 128
>gi|239983815|sp|A3BH91.1|Y7838_ORYSJ RecName: Full=B3 domain-containing protein Os07g0183700
gi|125599354|gb|EAZ38930.1| hypothetical protein OsJ_23349 [Oryza sativa Japonica Group]
Length = 524
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 113/258 (43%), Gaps = 25/258 (9%)
Query: 21 LPSKI-LCRVVNIHLMAEQETDEVYAQITLLPEPSQNEP----TTPDPCPADSPRPKVHS 75
LP +I LC+V ++ L A T+E A I+L+P + + DP PA + + S
Sbjct: 278 LPGRIFLCKVTDVRLGAA-ATNEALATISLVPIAADDHAFQLQAPADPDPAPAQSQSLVS 336
Query: 76 FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQ 135
F K LT +D + + A LP + +N P L KDL G EW F + ++
Sbjct: 337 FVKPLTYTDVTKNRFMVPKDDAAAGVLPHIQLNDDVP---LRIKDLSGKEWAFNYTWKAH 393
Query: 136 PRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMH 195
R + GW F + LV GD VF+R NGE+ + VR + P SV
Sbjct: 394 TR--MFRNGWMEFSNANGLVTGDNAVFMRRGNGEMFMAVR--RTRNRPAPFSVEE----- 444
Query: 196 LGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDS 253
+ A A + F V Y R +F++ + + + +FA GM + ED
Sbjct: 445 ---VIEAVWRAARREPFEVSYCLRQDGDEFVVPRDIVDDGLRARFAPGMAVNFVWAVEDG 501
Query: 254 --PERRFSGTVVGVEDFS 269
P G V+ +E+++
Sbjct: 502 KLPTIGPQGEVISIENYA 519
>gi|357454777|ref|XP_003597669.1| Auxin-responsive protein IAA18 [Medicago truncatula]
gi|355486717|gb|AES67920.1| Auxin-responsive protein IAA18 [Medicago truncatula]
Length = 269
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 55/113 (48%), Gaps = 24/113 (21%)
Query: 535 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD------------------------IKG 570
K+ M GV +GR +DL YD+L ++++F I G
Sbjct: 151 KINMDGVPIGRKVDLNAYHSYDNLSSAVDDLFRGLLKAQRDSSACGGNNKKEEEEKVITG 210
Query: 571 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSK 623
L ++ +VY D+EGD MLVGD PWH F + VKR+ + S ++ + G++
Sbjct: 211 LLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSTELSAFTLGTR 263
>gi|304322550|gb|ADL70762.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
gi|304322562|gb|ADL70768.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
gi|304322568|gb|ADL70771.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
gi|304322572|gb|ADL70773.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
Length = 174
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%)
Query: 534 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVG 593
K+ M+GV +GR ++L+ Y L ++++F K ++ +VY D EGD +LVG
Sbjct: 82 VKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFSKKDSWDLNRQYTLVYEDTEGDKVLVG 141
Query: 594 DDPWHEFCNMVKRIFICSSQDVKKMSP 620
D PW F + VKR+ + + +SP
Sbjct: 142 DVPWEMFVSTVKRLHVLKTSHAFSLSP 168
>gi|304322554|gb|ADL70764.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
Length = 158
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%)
Query: 534 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVG 593
K+ M+GV +GR ++L+ Y L ++++F K ++ +VY D EGD +LVG
Sbjct: 66 VKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFSKKDSWDLNRQYTLVYEDTEGDKVLVG 125
Query: 594 DDPWHEFCNMVKRIFICSSQDVKKMSP 620
D PW F + VKR+ + + +SP
Sbjct: 126 DVPWEMFVSTVKRLHVLKTSHAFSLSP 152
>gi|18420964|ref|NP_568478.1| auxin-responsive protein IAA28 [Arabidopsis thaliana]
gi|11131406|sp|Q9XFM0.1|IAA28_ARATH RecName: Full=Auxin-responsive protein IAA28; AltName:
Full=Indoleacetic acid-induced protein 28
gi|4929493|gb|AAD34019.1|AF149816_1 IAA28 [Arabidopsis thaliana]
gi|23306354|gb|AAN17404.1| putative protein [Arabidopsis thaliana]
gi|25084149|gb|AAN72186.1| putative protein [Arabidopsis thaliana]
gi|49616373|gb|AAT67083.1| IAA28 [Arabidopsis thaliana]
gi|110736579|dbj|BAF00255.1| IAA28 [Arabidopsis thaliana]
gi|284794587|gb|ADB93666.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
gi|284794589|gb|ADB93667.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
gi|284794591|gb|ADB93668.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
gi|304322548|gb|ADL70761.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
gi|304322560|gb|ADL70767.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
gi|304322566|gb|ADL70770.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
gi|304322570|gb|ADL70772.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
gi|332006115|gb|AED93498.1| auxin-responsive protein IAA28 [Arabidopsis thaliana]
Length = 175
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%)
Query: 534 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVG 593
K+ M+GV +GR ++L+ Y L ++++F K ++ +VY D EGD +LVG
Sbjct: 83 VKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFSKKDSWDLNRQYTLVYEDTEGDKVLVG 142
Query: 594 DDPWHEFCNMVKRIFICSSQDVKKMSP 620
D PW F + VKR+ + + +SP
Sbjct: 143 DVPWEMFVSTVKRLHVLKTSHAFSLSP 169
>gi|224099985|ref|XP_002311698.1| predicted protein [Populus trichocarpa]
gi|222851518|gb|EEE89065.1| predicted protein [Populus trichocarpa]
Length = 258
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 73/167 (43%), Gaps = 26/167 (15%)
Query: 475 PVSSLTTEGHIISTISAAADSD---GKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNR 531
P+ + + +A A+ D G+ DI+K+ +KK + S S +
Sbjct: 83 PIRAYRMNSLVNQAKAARAEEDKGIGEKDISKDNLKKK-----ICNGNKTSAPSNEKGHL 137
Query: 532 SRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF--------DIKGQLHTRTK------ 577
KV M G+ +GR +DL Y+ L LEEMF I G+ TK
Sbjct: 138 GFVKVNMDGIPIGRKVDLNAHACYETLAQALEEMFFRSATTINSIGGEKRQVTKPSKLLD 197
Query: 578 ----WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 620
+ + Y D EGD MLVGD PW F N VKR+ I + + ++P
Sbjct: 198 GLSEFLLTYEDKEGDWMLVGDVPWGMFLNSVKRLRIMRTSEANGLAP 244
>gi|125554220|gb|EAY99825.1| hypothetical protein OsI_21816 [Oryza sativa Indica Group]
Length = 183
Score = 67.0 bits (162), Expect = 3e-08, Method: Composition-based stats.
Identities = 37/80 (46%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 535 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL--HTRTK---WEIVYTDDEGDM 589
KV+M+G+A+GR LDL+ L Y L+D L MF Q H R + + + Y D EGD
Sbjct: 102 KVKMEGLAIGRKLDLSILGSYAELLDTLHLMFPSTNQEDGHDRRRRHPYAVTYEDGEGDW 161
Query: 590 MLVGDDPWHEFCNMVKRIFI 609
MLVGD PW F VKR+ I
Sbjct: 162 MLVGDVPWEAFAKSVKRLKI 181
>gi|242035245|ref|XP_002465017.1| hypothetical protein SORBIDRAFT_01g030520 [Sorghum bicolor]
gi|241918871|gb|EER92015.1| hypothetical protein SORBIDRAFT_01g030520 [Sorghum bicolor]
Length = 274
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 56/119 (47%), Gaps = 16/119 (13%)
Query: 67 DSPRP--------KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQE--- 115
DS RP K H F KV+T SD + ++HA P LD + +
Sbjct: 13 DSERPRGGVAWVEKEHMFEKVVTPSDVGKLNRLVIPKQHAERYFPALDASAAAAAAAAGG 72
Query: 116 -----LVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGE 169
L +D G WRF++ + + +++T GWS FV KRL AGDT +F RG GE
Sbjct: 73 GKGLVLSFEDRAGKAWRFRYSYWNSSQSYVMTKGWSRFVKEKRLGAGDTVLFARGAGGE 131
>gi|302808953|ref|XP_002986170.1| hypothetical protein SELMODRAFT_425183 [Selaginella moellendorffii]
gi|300146029|gb|EFJ12701.1| hypothetical protein SELMODRAFT_425183 [Selaginella moellendorffii]
Length = 283
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 64/135 (47%), Gaps = 40/135 (29%)
Query: 2 EQLEASTNQELNQRIPLFRLPSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEP-TT 60
EQ+ AST +E + IP+ HL A+QE DEV+AQ+TL P +P
Sbjct: 44 EQVVASTQKEADFDIPI-------------SHLHADQENDEVFAQMTLQPFSQTADPFLL 90
Query: 61 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 120
PD + + SFS+ LT D Q+ P QELVA+D
Sbjct: 91 PDF--GIQTKQTIVSFSRTLT------------------------DFTQTPPAQELVARD 124
Query: 121 LHGYEWRFKHIFRGQ 135
LH EWRF+HI+RG+
Sbjct: 125 LHNIEWRFRHIYRGR 139
>gi|16610207|dbj|BAB71765.1| IAA/AUX protein [Physcomitrella patens]
Length = 484
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 59/129 (45%), Gaps = 24/129 (18%)
Query: 521 QSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD--IKGQLHTR--- 575
Q K + +S+ + K+ M GV GR +DL T YD L LE+MF I GQ
Sbjct: 348 QRKGASTSSSGNLVKIYMDGVPFGRKVDLKTNDSYDKLYSMLEDMFQQYISGQYCGGRSS 407
Query: 576 -------------------TKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVK 616
+++ ++Y D EGD MLVGD PW F N VKR+ I +
Sbjct: 408 SSGESHWVASSRKLNFLEGSEYVLIYEDHEGDSMLVGDVPWELFVNAVKRLRIMKGSEQV 467
Query: 617 KMSPGSKLP 625
++P + P
Sbjct: 468 NLAPKNADP 476
>gi|168044918|ref|XP_001774926.1| predicted protein [Physcomitrella patens subsp. patens]
gi|16610209|dbj|BAB71766.1| IAA/AUX protein [Physcomitrella patens]
gi|162673673|gb|EDQ60192.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 503
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 59/129 (45%), Gaps = 24/129 (18%)
Query: 521 QSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD--IKGQLHTR--- 575
Q K + +S+ + K+ M GV GR +DL T YD L LE+MF I GQ
Sbjct: 367 QRKGASTSSSGNLVKIYMDGVPFGRKVDLKTNDSYDKLYSMLEDMFQQYISGQYCGGRSS 426
Query: 576 -------------------TKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVK 616
+++ ++Y D EGD MLVGD PW F N VKR+ I +
Sbjct: 427 SSGESHWVASSRKLNFLEGSEYVLIYEDHEGDSMLVGDVPWELFVNAVKRLRIMKGSEQV 486
Query: 617 KMSPGSKLP 625
++P + P
Sbjct: 487 NLAPKNADP 495
>gi|21593621|gb|AAM65588.1| putative auxin-induced protein, IAA12 [Arabidopsis thaliana]
Length = 239
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 50/99 (50%), Gaps = 12/99 (12%)
Query: 534 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF-DIKGQ-----------LHTRTKWEIV 581
KV M GV +GR +D+ Y++L LEEMF + G L + + +
Sbjct: 127 VKVNMDGVGIGRKVDMRAHSSYENLAQTLEEMFFGMTGTTCREKVKPLRLLDGSSDFVLT 186
Query: 582 YTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 620
Y D EGD MLVGD PW F N VKR+ I + + ++P
Sbjct: 187 YEDKEGDWMLVGDVPWRMFINSVKRLRIMGTSEASGLAP 225
>gi|224104803|ref|XP_002333896.1| predicted protein [Populus trichocarpa]
gi|224163513|ref|XP_002338568.1| predicted protein [Populus trichocarpa]
gi|222838928|gb|EEE77279.1| predicted protein [Populus trichocarpa]
gi|222872802|gb|EEF09933.1| predicted protein [Populus trichocarpa]
Length = 109
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 46/74 (62%), Gaps = 6/74 (8%)
Query: 217 KPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFS-----GTVVGVEDFSP- 270
+ +S+F I NK+L++++ F+ GMR+KM FE ED+ ERRF+ G + GV + P
Sbjct: 27 RASSSEFTIPFNKFLKSLDQSFSSGMRFKMCFETEDAAERRFAIHGYTGIITGVSELDPA 86
Query: 271 HWKDSKWRSLKVQW 284
W SKW+ L V W
Sbjct: 87 RWPGSKWKCLLVSW 100
>gi|118484337|gb|ABK94046.1| unknown [Populus trichocarpa]
Length = 303
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 68/155 (43%), Gaps = 23/155 (14%)
Query: 487 STISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSR----TKVQMQGVA 542
S +S A + + D K EK + + + K ++ T N KV M GV
Sbjct: 137 SLVSQAKAARAEED--KGIGEKDKSKENLKKKICNGNKTNATGNEKGHLGFVKVNMDGVP 194
Query: 543 VGRALDLTTLVGYDHLIDELEEMF--------DIKGQ---------LHTRTKWEIVYTDD 585
+GR +DL Y+ L LEEMF I GQ L +++ + Y D
Sbjct: 195 IGRKVDLNAHACYETLAQALEEMFFRSTTTINSIGGQKPLSKFSKLLDGSSEFVLTYEDK 254
Query: 586 EGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 620
EGD MLVGD PW F VKR+ I + + ++P
Sbjct: 255 EGDWMLVGDVPWGMFLTSVKRLRIMRTSEANGLAP 289
>gi|351722464|ref|NP_001236733.1| uncharacterized protein LOC100305535 [Glycine max]
gi|255625835|gb|ACU13262.1| unknown [Glycine max]
Length = 189
Score = 66.6 bits (161), Expect = 4e-08, Method: Composition-based stats.
Identities = 52/181 (28%), Positives = 73/181 (40%), Gaps = 8/181 (4%)
Query: 458 GIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSP 517
G+E+ P ++P + + + S I A D + S + K + V P
Sbjct: 7 GLEITTELRLGLPGGELPGKNEKIKKRVFSEIQAHDDDENSSSEQDRKIQTKNQVVGWPP 66
Query: 518 KESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK 577
S K++ + + KV M G R +DL GY L+ LE+ F G
Sbjct: 67 VCSYRKKNTVNETKMYVKVSMDGAPFLRKIDLAMHKGYSELVLALEKFFGCYGIREALKD 126
Query: 578 WE-----IVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVK--KMSPGSKLPMFSIE 630
E +Y D +GD MLVGD PW F KR+ I D K + P L F IE
Sbjct: 127 AENAEHVPIYEDKDGDWMLVGDVPWEMFIESCKRLRIMKGSDAKGFDLQPKGSLKGF-IE 185
Query: 631 G 631
G
Sbjct: 186 G 186
>gi|414585760|tpg|DAA36331.1| TPA: hypothetical protein ZEAMMB73_124394 [Zea mays]
Length = 409
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 72 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 131
K H F KV+T SD + ++HA + P LD + Q L +D G WRF++
Sbjct: 90 KEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGQLLSFEDRAGKLWRFRYS 148
Query: 132 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 165
+ + +++T GWS FV KRL AGDT F RG
Sbjct: 149 YWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRG 182
>gi|413917350|gb|AFW57282.1| hypothetical protein ZEAMMB73_740283 [Zea mays]
Length = 249
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 80/193 (41%), Gaps = 19/193 (9%)
Query: 37 EQETDEVYAQITLLPEPSQNEPTTPDPCPADS-PRPKVHSFSKVLTASDTSTHGGFSVLR 95
++E + +Y Q L + P+ S + H F KVLT SD V +
Sbjct: 21 QEEDNNLYKQQRALGQDLHRRQGVSGGGPSHSHGVEREHMFDKVLTPSDVGKLNRLVVPK 80
Query: 96 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 155
+HA P + +L +D G W+F++ + G + +++T GWS FV + RL
Sbjct: 81 QHAERFFPA----AGAGSTQLCFQDRGGALWQFRYSYWGSSQSYVMTKGWSRFVRAARLA 136
Query: 156 AGDTFVFLRGENGELHVGVRCLARQQSSMPSS--------------VISSQSMHLGVLAT 201
AGDT F R G + R R++ + S VI + +M+ G
Sbjct: 137 AGDTVTFSRSGGGRYFIEYRHCQRRRRDVDISFGDAATVPAWPRPIVIGTAAMNNGGATV 196
Query: 202 ASHAVATQTMFVV 214
AS +A + V
Sbjct: 197 ASATIAGHDIEVA 209
>gi|224107521|ref|XP_002314509.1| predicted protein [Populus trichocarpa]
gi|222863549|gb|EEF00680.1| predicted protein [Populus trichocarpa]
Length = 276
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 61/139 (43%), Gaps = 21/139 (15%)
Query: 503 KEFKEKKQEQVQVSPKESQSKQSCLTSNRSR----TKVQMQGVAVGRALDLTTLVGYDHL 558
K EK + + + K ++ T N KV M GV +GR +DL Y+ L
Sbjct: 124 KGIGEKDKSKENLKKKICNGNKTNATGNEKGHLGFVKVNMDGVPIGRKVDLNAHACYETL 183
Query: 559 IDELEEMF--------DIKGQ---------LHTRTKWEIVYTDDEGDMMLVGDDPWHEFC 601
LEEMF I GQ L +++ + Y D EGD MLVGD PW F
Sbjct: 184 AQALEEMFFRSTTTINSIGGQKPLSKFSKLLDGSSEFVLTYEDKEGDWMLVGDVPWGMFL 243
Query: 602 NMVKRIFICSSQDVKKMSP 620
VKR+ I + + ++P
Sbjct: 244 TSVKRLRIMRTSEANGLAP 262
>gi|312282513|dbj|BAJ34122.1| unnamed protein product [Thellungiella halophila]
Length = 249
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 15/133 (11%)
Query: 502 AKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDE 561
A+E +E +++V+ + +K++ KV M GVA+GR +DL Y++L
Sbjct: 102 AREEEEAGKKKVKDDETKDVTKKANGKVQVGFIKVNMDGVAIGRKVDLNAHSSYENLAQT 161
Query: 562 LEEMF--------DIKGQ-------LHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKR 606
LE+MF + GQ L +++ + Y D EGD MLVGD PW F VKR
Sbjct: 162 LEDMFFRNNPGTIGLTGQFTKPLRLLDGSSEFVLTYEDKEGDWMLVGDVPWRMFITSVKR 221
Query: 607 IFICSSQDVKKMS 619
+ + + + ++
Sbjct: 222 LRVMKTSEANGLA 234
>gi|225432228|ref|XP_002275515.1| PREDICTED: auxin-responsive protein IAA31 [Vitis vinifera]
gi|297736834|emb|CBI26035.3| unnamed protein product [Vitis vinifera]
Length = 198
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 535 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD---------IKGQLHTRTKWEIVYTDD 585
KV M+G+++GR LDL GYD L+ L MF + G H+ + Y D
Sbjct: 109 KVYMEGISIGRKLDLFAYSGYDGLVATLSHMFKTTIFCSDPHVGGADHSGKYHILTYEDK 168
Query: 586 EGDMMLVGDDPWHEFCNMVKRIFI 609
EGD M+VGD PW F VKR+ I
Sbjct: 169 EGDWMMVGDVPWEMFLTTVKRLKI 192
>gi|365818545|gb|AEX00361.1| IAA19 [Solanum lycopersicum]
Length = 192
Score = 66.2 bits (160), Expect = 5e-08, Method: Composition-based stats.
Identities = 41/111 (36%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 518 KESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG---QLHT 574
K S + + ++N+ KV M G R +DL+T GYD L+ LE++FD G L
Sbjct: 72 KNSFNGREAESNNKMYVKVSMDGAPFLRKVDLSTHKGYDQLVMALEKLFDCYGIGEALED 131
Query: 575 RTKWEIV--YTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSK 623
K E V Y D +GD MLVGD PW F KR+ I + K + G++
Sbjct: 132 ADKSEFVPIYEDKDGDWMLVGDVPWIMFSESCKRLRIMKRSEAKVIGLGAR 182
>gi|302398571|gb|ADL36580.1| ARF domain class transcription factor [Malus x domestica]
Length = 325
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 23/108 (21%)
Query: 534 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF-----------------------DIKG 570
K+ M GV +GR +DL Y L ++E+F +I G
Sbjct: 207 VKINMDGVPIGRKVDLGAYDSYQKLSSAVDELFRGLLAAQRESCNGGTKNKQEEEKEITG 266
Query: 571 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 618
L ++ +VY D+EGD MLVGD PWH F + VKR+ + S ++ +
Sbjct: 267 LLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSELSAL 314
>gi|110736486|dbj|BAF00211.1| auxin response factor 9 [Arabidopsis thaliana]
Length = 58
Score = 66.2 bits (160), Expect = 6e-08, Method: Composition-based stats.
Identities = 30/44 (68%), Positives = 36/44 (81%)
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGE 632
+MLVGDDPW EFCNMVKRIFI S ++VKKM+PG++L M E E
Sbjct: 1 IMLVGDDPWPEFCNMVKRIFIWSKEEVKKMTPGNQLRMLLREVE 44
>gi|25553616|dbj|BAC24876.1| auxin response factor 10-like protein [Oryza sativa Japonica Group]
gi|50509194|dbj|BAD30348.1| auxin response factor 10-like protein [Oryza sativa Japonica Group]
Length = 585
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 104/240 (43%), Gaps = 23/240 (9%)
Query: 21 LPSKI-LCRVVNIHLMAEQETDEVYAQITLLPEPSQNEP----TTPDPCPADSPRPKVHS 75
LP +I LC+V ++ L A T+E A I+L+P + + DP PA + + S
Sbjct: 318 LPGRIFLCKVTDVRLGAA-ATNEALATISLVPIAADDHAFQLQAPADPDPAPAQSQSLVS 376
Query: 76 FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQ 135
F K LT +D + + A LP + +N P L KDL G EW F + ++
Sbjct: 377 FVKPLTYTDVTKNRFMVPKDDAAAGVLPHIQLNDDVP---LRIKDLSGKEWAFNYTWKAH 433
Query: 136 PRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMH 195
R + GW F + LV GD VF+R NGE+ + VR + P SV
Sbjct: 434 TR--MFRNGWMEFSNANGLVTGDNAVFMRRGNGEMFMAVR--RTRNRPAPFSVEE----- 484
Query: 196 LGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDS 253
+ A A + F V Y R +F++ + + + +FA GM + ED
Sbjct: 485 ---VIEAVWRAARREPFEVSYCLRQDGDEFVVPRDIVDDGLRARFAPGMAVNFVWAVEDG 541
>gi|302398577|gb|ADL36583.1| ARF domain class transcription factor [Malus x domestica]
Length = 306
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 21/161 (13%)
Query: 475 PVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRT 534
P+S+ + +A A+ D + + ++ K+ ++++ V K + ++ L
Sbjct: 138 PISAARMNSLVNQAKTARAEDD--TAVGEKSKDTSKKKINVGSKTTVKEKGHL----GFV 191
Query: 535 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMF-----DIKGQ----------LHTRTKWE 579
KV M G+ +GR +DL Y+ L LEEMF I G L +++
Sbjct: 192 KVNMDGIPIGRKVDLNAHSCYETLAQTLEEMFISPTTTIGGDTEQAKKPSKLLDGSSEFV 251
Query: 580 IVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 620
+ Y D EGD MLVGD PW F VKR+ I + + ++P
Sbjct: 252 LTYEDKEGDWMLVGDVPWGMFLGSVKRLRIMRTSEANGLAP 292
>gi|225437764|ref|XP_002281145.1| PREDICTED: auxin-responsive protein IAA4 [Vitis vinifera]
gi|297744081|emb|CBI37051.3| unnamed protein product [Vitis vinifera]
Length = 175
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 45/82 (54%), Gaps = 7/82 (8%)
Query: 535 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMF-------DIKGQLHTRTKWEIVYTDDEG 587
KV M+G+ +GR LDL GY LI L+ MF ++ G LH+ + Y D EG
Sbjct: 88 KVYMEGIPIGRKLDLFAHDGYHALIRTLDHMFSTTILWAEVDGVLHSEKCHVLTYEDKEG 147
Query: 588 DMMLVGDDPWHEFCNMVKRIFI 609
D M+VGD PW F VKR+ I
Sbjct: 148 DWMMVGDVPWELFLTTVKRLKI 169
>gi|304308205|gb|ADL70415.1| truncated auxin response factor 13 [Arabidopsis thaliana]
Length = 59
Score = 65.9 bits (159), Expect = 7e-08, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 44/84 (52%), Gaps = 26/84 (30%)
Query: 194 MHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDS 253
M GV+A+ +A T+ MF V YKPR M+FEG+D
Sbjct: 2 MQHGVIASVVNAFKTKCMFNVVYKPR--------------------------MQFEGKDF 35
Query: 254 PERRFSGTVVGVEDFSPHWKDSKW 277
E+++ GT++GV D SPHWKDS+W
Sbjct: 36 SEKKYDGTIIGVNDMSPHWKDSEW 59
>gi|399894421|gb|AFP54302.1| ARF domain class transcription factor [Pyrus x bretschneideri]
Length = 306
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 21/161 (13%)
Query: 475 PVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRT 534
P+S+ + +A A+ D + + ++ K+ ++++ V K + ++ L
Sbjct: 138 PISAARMNSLVNQAKTARAEDD--TAVGEKSKDTSKKKINVGSKTTVKEKGHL----GFV 191
Query: 535 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMF-----DIKGQ----------LHTRTKWE 579
KV M G+ +GR +DL Y+ L LEEMF I G L +++
Sbjct: 192 KVNMDGIPIGRKVDLNAHSCYETLAQTLEEMFISPTTAIGGDTEQAKKPSKLLDGSSEFV 251
Query: 580 IVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 620
+ Y D EGD MLVGD PW F VKR+ I + + ++P
Sbjct: 252 LTYEDKEGDWMLVGDVPWGMFLGSVKRLRIMRTSEANGLAP 292
>gi|240255717|ref|NP_192059.4| AP2/B3-like transcriptional factor family protein [Arabidopsis
thaliana]
gi|334302839|sp|O82595.2|NGA4_ARATH RecName: Full=B3 domain-containing transcription factor NGA4;
AltName: Full=Protein NGATHA 4
gi|332656633|gb|AEE82033.1| AP2/B3-like transcriptional factor family protein [Arabidopsis
thaliana]
Length = 333
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 74 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 133
H F KVLT SD + ++HA E PL+ NQ+ + +D +G WRF++ +
Sbjct: 34 HMFDKVLTPSDVGKLNRLVIPKQHA-ENFFPLEDNQNGTVLDF--QDKNGKMWRFRYSYW 90
Query: 134 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 165
+ +++T GWS FV K+L AGDT F RG
Sbjct: 91 NSSQSYVMTKGWSRFVKEKKLFAGDTVSFYRG 122
>gi|30685642|ref|NP_850205.1| auxin-responsive protein IAA13 [Arabidopsis thaliana]
gi|38503400|sp|Q38831.2|IAA13_ARATH RecName: Full=Auxin-responsive protein IAA13; AltName:
Full=Indoleacetic acid-induced protein 13
gi|29028860|gb|AAO64809.1| At2g33310 [Arabidopsis thaliana]
gi|110742999|dbj|BAE99393.1| auxin regulated protein [Arabidopsis thaliana]
gi|330253719|gb|AEC08813.1| auxin-responsive protein IAA13 [Arabidopsis thaliana]
Length = 247
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 15/106 (14%)
Query: 535 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMF--------DIKGQ-------LHTRTKWE 579
KV M GVA+GR +DL Y++L LE+MF + Q L +++
Sbjct: 133 KVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSEFV 192
Query: 580 IVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLP 625
+ Y D EGD MLVGD PW F N VKR+ + + + ++ ++ P
Sbjct: 193 LTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLAARNQEP 238
>gi|357134358|ref|XP_003568784.1| PREDICTED: auxin-responsive protein IAA16-like [Brachypodium
distachyon]
Length = 239
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 48/114 (42%), Gaps = 28/114 (24%)
Query: 534 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF--------------------------- 566
K+ M GV +GR +DL GY L D ++ +F
Sbjct: 112 VKINMDGVPIGRKVDLKAHGGYGKLADAVDHLFRGLLAAQRDVNPAIAVGQSSCAGEKNT 171
Query: 567 -DIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
I G L ++ +VY DDEGD MLVGD PW F KR+ + S D+ S
Sbjct: 172 AAITGLLDGSGEYTLVYEDDEGDQMLVGDVPWDMFVATAKRLRVLRSSDLNASS 225
>gi|3695373|gb|AAC62776.1| F11O4.9 [Arabidopsis thaliana]
gi|7268193|emb|CAB77720.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|119360095|gb|ABL66776.1| At4g01500 [Arabidopsis thaliana]
gi|225898755|dbj|BAH30508.1| hypothetical protein [Arabidopsis thaliana]
gi|227060729|gb|ACP18974.1| NGATHA4 [Arabidopsis thaliana]
Length = 328
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 74 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 133
H F KVLT SD + ++HA E PL+ NQ+ + +D +G WRF++ +
Sbjct: 29 HMFDKVLTPSDVGKLNRLVIPKQHA-ENFFPLEDNQNGTVLDF--QDKNGKMWRFRYSYW 85
Query: 134 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 165
+ +++T GWS FV K+L AGDT F RG
Sbjct: 86 NSSQSYVMTKGWSRFVKEKKLFAGDTVSFYRG 117
>gi|413919134|gb|AFW59066.1| hypothetical protein ZEAMMB73_672691 [Zea mays]
Length = 404
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 66/151 (43%), Gaps = 5/151 (3%)
Query: 72 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 131
K H F KV+T SD + ++HA + P LD + L +D G WRF++
Sbjct: 83 KEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGLLLSFEDRAGKLWRFRYS 141
Query: 132 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG----ENGELHVGVRCLARQQSSMPSS 187
+ + +++T GWS FV KRL AGDT F RG L + R + S P
Sbjct: 142 YWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRGAADAARDRLFIDWRKRSADSSRHPHR 201
Query: 188 VISSQSMHLGVLATASHAVATQTMFVVYYKP 218
++ +H+ LA+ ++ P
Sbjct: 202 MLPRLPLHMPPLASPYGYGPWGGGAGGFFVP 232
>gi|15225833|ref|NP_180889.1| auxin-responsive protein IAA13 [Arabidopsis thaliana]
gi|186504957|ref|NP_001118434.1| auxin-responsive protein IAA13 [Arabidopsis thaliana]
gi|12083208|gb|AAG48763.1|AF332399_1 auxin-regulated protein IAA13 [Arabidopsis thaliana]
gi|972929|gb|AAC49054.1| IAA13 [Arabidopsis thaliana]
gi|2459414|gb|AAB80649.1| auxin regulated protein (IAA13) [Arabidopsis thaliana]
gi|21537404|gb|AAM61745.1| auxin regulated protein IAA13 [Arabidopsis thaliana]
gi|330253718|gb|AEC08812.1| auxin-responsive protein IAA13 [Arabidopsis thaliana]
gi|330253720|gb|AEC08814.1| auxin-responsive protein IAA13 [Arabidopsis thaliana]
Length = 246
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 15/106 (14%)
Query: 535 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMF--------DIKGQ-------LHTRTKWE 579
KV M GVA+GR +DL Y++L LE+MF + Q L +++
Sbjct: 132 KVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSEFV 191
Query: 580 IVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLP 625
+ Y D EGD MLVGD PW F N VKR+ + + + ++ ++ P
Sbjct: 192 LTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLAARNQEP 237
>gi|218187663|gb|EEC70090.1| hypothetical protein OsI_00719 [Oryza sativa Indica Group]
Length = 237
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 21/101 (20%)
Query: 534 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRT----------------- 576
K+ M GV +GR +DLT GY L ++++F +G L ++
Sbjct: 120 VKINMDGVPIGRKVDLTAYGGYAQLSAAVDKLF--RGLLAAQSAAADGEADAAAAGEMVG 177
Query: 577 --KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDV 615
++ +VY DDEGD MLVGD PW F KR+ + S D+
Sbjct: 178 GGEYTLVYEDDEGDRMLVGDVPWQMFIATAKRLRVLKSSDL 218
>gi|242078245|ref|XP_002443891.1| hypothetical protein SORBIDRAFT_07g003880 [Sorghum bicolor]
gi|241940241|gb|EES13386.1| hypothetical protein SORBIDRAFT_07g003880 [Sorghum bicolor]
Length = 253
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 5/95 (5%)
Query: 74 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 133
H F KVLT SD V ++HA P + +L +D G W+F++ +
Sbjct: 55 HMFDKVLTPSDVGKLNRLVVPKQHAERFFPA-----AGAGTQLCFQDCGGALWQFRYSYW 109
Query: 134 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENG 168
G + +++T GWS FV + RL AGDT F RG G
Sbjct: 110 GSSQSYVMTKGWSRFVRAARLAAGDTVTFSRGAGG 144
>gi|304322701|gb|ADL70803.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
Length = 151
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Query: 534 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD---IKGQLHTRTKWEIVYTDDEGDMM 590
KV M+GV +GR LDL GY+ L++ L MFD I G R + Y D +GD M
Sbjct: 68 VKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGN-RDRKHHVLTYEDKDGDWM 126
Query: 591 LVGDDPWHEFCNMVKRIFI 609
+VGD PW F V+R+ I
Sbjct: 127 MVGDIPWDMFLETVRRLKI 145
>gi|304322695|gb|ADL70800.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
gi|304322711|gb|ADL70808.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
Length = 157
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 534 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWE--IVYTDDEGDMML 591
KV M+GV +GR LDL GY+ L++ L MFD R + + Y D +GD M+
Sbjct: 74 VKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGNRDRKHHVLTYEDKDGDWMM 133
Query: 592 VGDDPWHEFCNMVKRIFI 609
VGD PW F V+R+ I
Sbjct: 134 VGDIPWDMFLETVRRLKI 151
>gi|23308285|gb|AAN18112.1| At3g17600/MKP6_15 [Arabidopsis thaliana]
Length = 158
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 534 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWE--IVYTDDEGDMML 591
KV M+GV +GR LDL GY+ L++ L MFD R + + Y D +GD M+
Sbjct: 75 VKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGNRDRKHHVLTYEDKDGDWMM 134
Query: 592 VGDDPWHEFCNMVKRIFI 609
VGD PW F V+R+ I
Sbjct: 135 VGDIPWDMFLETVRRLKI 152
>gi|297834672|ref|XP_002885218.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297331058|gb|EFH61477.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 158
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 534 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWE--IVYTDDEGDMML 591
KV M+GV +GR LDL GY+ L++ L MFD R + + Y D +GD M+
Sbjct: 75 VKVYMEGVPIGRKLDLCAFSGYESLLENLSHMFDTSIICGNRDRKHHVLTYEDKDGDWMM 134
Query: 592 VGDDPWHEFCNMVKRIFI 609
VGD PW F V+R+ I
Sbjct: 135 VGDIPWDMFLETVRRLKI 152
>gi|298108643|gb|ADB93684.2| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
Length = 155
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 534 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWE--IVYTDDEGDMML 591
KV M+GV +GR LDL GY+ L++ L MFD R + + Y D +GD M+
Sbjct: 74 VKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGNRDRKHHVLTYEDKDGDWMM 133
Query: 592 VGDDPWHEFCNMVKRIFI 609
VGD PW F V+R+ I
Sbjct: 134 VGDIPWDMFLETVRRLKI 151
>gi|304322697|gb|ADL70801.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
Length = 158
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 534 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWE--IVYTDDEGDMML 591
KV M+GV +GR LDL GY+ L++ L MFD R + + Y D +GD M+
Sbjct: 75 VKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGNRDRKHHVLTYEDKDGDWMM 134
Query: 592 VGDDPWHEFCNMVKRIFI 609
VGD PW F V+R+ I
Sbjct: 135 VGDIPWDMFLETVRRLKI 152
>gi|15229074|ref|NP_188387.1| auxin-responsive protein IAA31 [Arabidopsis thaliana]
gi|46395870|sp|Q8H174.2|IAA31_ARATH RecName: Full=Auxin-responsive protein IAA31; AltName:
Full=Indoleacetic acid-induced protein 31
gi|9294148|dbj|BAB02050.1| unnamed protein product [Arabidopsis thaliana]
gi|15810012|gb|AAL06933.1| AT3g17600/MKP6_15 [Arabidopsis thaliana]
gi|49616379|gb|AAT67086.1| IAA31 [Arabidopsis thaliana]
gi|298108635|gb|ADB93680.2| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
gi|298108639|gb|ADB93682.2| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
gi|298108641|gb|ADB93683.2| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
gi|304322703|gb|ADL70804.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
gi|304322705|gb|ADL70805.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
gi|304322707|gb|ADL70806.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
gi|304322709|gb|ADL70807.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
gi|304322713|gb|ADL70809.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
gi|304322715|gb|ADL70810.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
gi|304322717|gb|ADL70811.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
gi|304322719|gb|ADL70812.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
gi|332642452|gb|AEE75973.1| auxin-responsive protein IAA31 [Arabidopsis thaliana]
Length = 158
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 534 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWE--IVYTDDEGDMML 591
KV M+GV +GR LDL GY+ L++ L MFD R + + Y D +GD M+
Sbjct: 75 VKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGNRDRKHHVLTYEDKDGDWMM 134
Query: 592 VGDDPWHEFCNMVKRIFI 609
VGD PW F V+R+ I
Sbjct: 135 VGDIPWDMFLETVRRLKI 152
>gi|304322699|gb|ADL70802.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
Length = 158
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 534 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWE--IVYTDDEGDMML 591
KV M+GV +GR LDL GY+ L++ L MFD R + + Y D +GD M+
Sbjct: 75 VKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGNRDRKHHVLTYEDKDGDWMM 134
Query: 592 VGDDPWHEFCNMVKRIFI 609
VGD PW F V+R+ I
Sbjct: 135 VGDIPWDMFLETVRRLKI 152
>gi|359473594|ref|XP_002273120.2| PREDICTED: uncharacterized protein LOC100266020 [Vitis vinifera]
Length = 1203
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 44/65 (67%), Gaps = 2/65 (3%)
Query: 166 ENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQF 223
E L GVR RQQ+S+PSSV+S+ S+H+GVLA SHA A ++ F ++Y PR S+F
Sbjct: 500 EQKPLLFGVRRANRQQTSLPSSVLSTDSLHIGVLAATSHAAANRSPFTIFYNPRACPSKF 559
Query: 224 IISLN 228
I S N
Sbjct: 560 ISSAN 564
Score = 40.0 bits (92), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 34/52 (65%), Gaps = 4/52 (7%)
Query: 558 LIDE--LEEMFDIKGQLHTR--TKWEIVYTDDEGDMMLVGDDPWHEFCNMVK 605
L++E +E M ++ L+ + W++VY D E D++LVGDDPW+ ++++
Sbjct: 985 LVNEKAIECMLGVEDVLNDEKGSSWKMVYVDYENDVLLVGDDPWNTMGSILQ 1036
>gi|298108637|gb|ADB93681.2| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
Length = 138
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 534 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWE--IVYTDDEGDMML 591
KV M+GV +GR LDL GY+ L++ L MFD R + + Y D +GD M+
Sbjct: 55 VKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGNRDRKHHVLTYEDKDGDWMM 114
Query: 592 VGDDPWHEFCNMVKRIFI 609
VGD PW F V+R+ I
Sbjct: 115 VGDIPWDMFLETVRRLKI 132
>gi|304322556|gb|ADL70765.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
Length = 164
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%)
Query: 534 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVG 593
K+ M+GV +GR ++L+ Y L ++++F K ++ +VY D EGD +LVG
Sbjct: 79 VKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFSKKDSWDLNRQYTLVYEDTEGDKVLVG 138
Query: 594 DDPWHEFCNMVKRIFICSS 612
D PW F + VKR+ + +
Sbjct: 139 DVPWEMFVSTVKRLHVLKT 157
>gi|297605239|ref|NP_001056915.2| Os06g0166500 [Oryza sativa Japonica Group]
gi|75252070|sp|Q5VRR0.1|IAA20_ORYSJ RecName: Full=Auxin-responsive protein IAA20; AltName:
Full=Indoleacetic acid-induced protein 20
gi|55296040|dbj|BAD67602.1| proliferating cell nuclear antigen-like [Oryza sativa Japonica
Group]
gi|55296147|dbj|BAD67865.1| proliferating cell nuclear antigen-like [Oryza sativa Japonica
Group]
gi|125596172|gb|EAZ35952.1| hypothetical protein OsJ_20255 [Oryza sativa Japonica Group]
gi|215734885|dbj|BAG95607.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255676750|dbj|BAF18829.2| Os06g0166500 [Oryza sativa Japonica Group]
Length = 183
Score = 64.3 bits (155), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/80 (45%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 535 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL--HTRTK---WEIVYTDDEGDM 589
KV+M+G+A+GR LDL+ L Y L+D L MF Q H R + + + Y D EGD
Sbjct: 102 KVKMEGLAIGRKLDLSILGSYAELLDTLHLMFPSTNQEDGHDRRRRHPYAVTYEDGEGDW 161
Query: 590 MLVGDDPWHEFCNMVKRIFI 609
M VGD PW F VKR+ I
Sbjct: 162 MQVGDVPWEAFAKSVKRLKI 181
>gi|326530302|dbj|BAJ97577.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 176
Score = 64.3 bits (155), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/104 (36%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Query: 509 KQEQVQVSPKESQSKQSCLTSNRS--RTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF 566
K+ V P S ++C KV+ +G A+GR +DL+ Y L+ L MF
Sbjct: 71 KKALVGWPPVSSARSRACGAGGGGGRHVKVRKEGAAIGRKVDLSLHGSYADLLATLARMF 130
Query: 567 -DIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 609
D G LH ++ + Y D +GD MLVGD PW +F VKR+ I
Sbjct: 131 PDPAGCLHAESEMVVTYEDADGDWMLVGDVPWDDFARSVKRLKI 174
>gi|110631502|gb|ABG81096.1| AUX/IAA-like protein [Pelargonium x hortorum]
Length = 192
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 66/144 (45%), Gaps = 12/144 (8%)
Query: 489 ISAAADSDG-KSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRAL 547
S A D D K+ I+ K + QV P S++S + N KV + G R +
Sbjct: 39 FSEAIDIDKTKTSISGSAKSPPKTQVVGWPPVKASRKSVVARNCKYVKVAVDGAPYLRKV 98
Query: 548 DLTTLVGYDHLIDELEEMFD---IKGQLHTRTKWEIV--------YTDDEGDMMLVGDDP 596
DL Y L++ LEE+F I+ L+ R ++V Y D +GD MLVGD P
Sbjct: 99 DLEMYGSYQQLLEALEELFSCLTIRNCLNERKLMDLVNGVEYVPTYEDKDGDWMLVGDVP 158
Query: 597 WHEFCNMVKRIFICSSQDVKKMSP 620
W F KR+ + S D ++P
Sbjct: 159 WKMFVESCKRVRLMKSSDAVGLAP 182
>gi|284794585|gb|ADB93665.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
gi|284794593|gb|ADB93669.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
Length = 168
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%)
Query: 534 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVG 593
K+ M+GV +GR ++L+ Y L ++++F K ++ +VY D EGD +LVG
Sbjct: 83 VKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFSKKDSWDLNRQYTLVYEDTEGDKVLVG 142
Query: 594 DDPWHEFCNMVKRIFICSS 612
D PW F + VKR+ + +
Sbjct: 143 DVPWEMFVSTVKRLHVLKT 161
>gi|429326560|gb|AFZ78620.1| hypothetical protein [Populus tomentosa]
Length = 291
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 71/166 (42%), Gaps = 26/166 (15%)
Query: 475 PVSSLTTEGHIISTISAAADSD---GKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNR 531
P+ + + +A A+ D G+ DI+K+ +KK + S S +
Sbjct: 83 PIRAYRMNSLVNQAKAARAEEDKGIGEKDISKDNLKKK-----ICNGNKTSAPSNEKGHL 137
Query: 532 SRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF--------DIKGQLHTRTK------ 577
KV M G+ +GR +DL Y+ L LEEMF I G+ TK
Sbjct: 138 GFVKVNMDGIPIGRKVDLNAHACYETLAQALEEMFLRSATTINSIGGEKRQVTKPSKLLD 197
Query: 578 ----WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
+ + Y D EGD MLVGD PW F N VKR+ I + + +
Sbjct: 198 GLSEFVLTYEDKEGDWMLVGDVPWGMFLNSVKRLRIMRTSEANGLG 243
>gi|304322558|gb|ADL70766.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
Length = 149
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%)
Query: 534 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVG 593
K+ M+GV +GR ++L+ Y L ++++F K ++ +VY D EGD +LVG
Sbjct: 64 VKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFSKKDSWDLNRQYTLVYEDTEGDKVLVG 123
Query: 594 DDPWHEFCNMVKRIFICSS 612
D PW F + VKR+ + +
Sbjct: 124 DVPWEMFVSTVKRLHVLKT 142
>gi|356545900|ref|XP_003541371.1| PREDICTED: auxin-responsive protein IAA11-like [Glycine max]
Length = 380
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 55/110 (50%), Gaps = 24/110 (21%)
Query: 535 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD-------------------IKGQLHTR 575
KV M G+ +GR +DL+ Y+ L LE+MF+ I G+ H++
Sbjct: 258 KVNMDGIPIGRKVDLSAHSSYETLAQTLEDMFNESTTVTTCKGSNGEDYGIIIGGERHSK 317
Query: 576 -----TKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 620
+K+ + Y D EGD MLVGD PW F + V+R+ I + + ++P
Sbjct: 318 LLDGSSKFVLTYEDKEGDWMLVGDVPWGMFLSSVRRLRIMRTSEANGLAP 367
>gi|304322552|gb|ADL70763.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
gi|304322564|gb|ADL70769.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
Length = 151
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%)
Query: 534 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVG 593
K+ M+GV +GR ++L+ Y L ++++F K ++ +VY D EGD +LVG
Sbjct: 66 VKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFSKKDSWDLNRQYTLVYEDTEGDKVLVG 125
Query: 594 DDPWHEFCNMVKRIFICSS 612
D PW F + VKR+ + +
Sbjct: 126 DVPWEMFVSTVKRLHVLKT 144
>gi|356536854|ref|XP_003536948.1| PREDICTED: auxin-responsive protein IAA11 [Glycine max]
Length = 373
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 55/110 (50%), Gaps = 24/110 (21%)
Query: 535 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD-------------------IKGQLHTR 575
KV M G+ +GR +DL+ Y+ L LE+MF+ I G+ H++
Sbjct: 251 KVNMDGIPIGRKVDLSAHSSYETLAQTLEDMFNESTTVTTCKGSNGEDYGFIIGGERHSK 310
Query: 576 -----TKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 620
+K+ + Y D EGD MLVGD PW F + V+R+ I + + ++P
Sbjct: 311 LLDGSSKFVLTYEDKEGDWMLVGDVPWGMFFSSVRRLRIMRTSEANGLAP 360
>gi|357140933|ref|XP_003572011.1| PREDICTED: putative B3 domain-containing protein Os10g0537100-like
[Brachypodium distachyon]
Length = 213
Score = 64.3 bits (155), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 72 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 131
K H F KV+T SD + ++HA P LD ++ L ++ G WRF++
Sbjct: 3 KEHMFEKVVTPSDVGKLNRLVIPKQHAERYFP-LDFDKGNGGIILSFEERGGKAWRFRYS 61
Query: 132 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 165
+ + +++T GWS FV KRL+AGD +F RG
Sbjct: 62 YWNSSQSYVMTKGWSRFVKDKRLLAGDAVLFARG 95
>gi|449436896|ref|XP_004136228.1| PREDICTED: auxin-responsive protein IAA18-like [Cucumis sativus]
gi|449502842|ref|XP_004161758.1| PREDICTED: auxin-responsive protein IAA18-like [Cucumis sativus]
Length = 358
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 59/132 (44%), Gaps = 26/132 (19%)
Query: 507 EKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHL---IDEL- 562
E +E VQ E+ SK S + + KV M GV +GR L+L YD L IDEL
Sbjct: 225 ESSKETVQ---DENGSKLSDCYNGQMFVKVCMDGVPIGRKLNLQAYNSYDQLSAGIDELF 281
Query: 563 -------------------EEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNM 603
EE + H + +VY D+EGD MLVGD PW F +
Sbjct: 282 HSLLAAQRNYLAAEDGRKMEETTSVSDSKHKNGLYTLVYYDNEGDRMLVGDVPWKMFVST 341
Query: 604 VKRIFICSSQDV 615
VKR+ + S V
Sbjct: 342 VKRLRVLKSSVV 353
>gi|115474429|ref|NP_001060811.1| Os08g0109400 [Oryza sativa Japonica Group]
gi|88911333|sp|P0C128.1|IAA25_ORYSJ RecName: Full=Auxin-responsive protein IAA25; AltName:
Full=Indoleacetic acid-induced protein 25
gi|113622780|dbj|BAF22725.1| Os08g0109400 [Oryza sativa Japonica Group]
gi|125597174|gb|EAZ36954.1| hypothetical protein OsJ_21291 [Oryza sativa Japonica Group]
gi|215687000|dbj|BAG90814.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 246
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 47/90 (52%), Gaps = 14/90 (15%)
Query: 534 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD--IKGQLHTR------------TKWE 579
KV ++G AVGR +DL YD L L+ MF + + TR ++
Sbjct: 146 VKVNLEGYAVGRKIDLKAHRSYDSLSQALQSMFHGFLSDGIATRDNELQQMEEGSKKRYV 205
Query: 580 IVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 609
+VY D+EGD MLVGD PW F VKR++I
Sbjct: 206 LVYEDNEGDRMLVGDVPWELFIASVKRLYI 235
>gi|125559895|gb|EAZ05343.1| hypothetical protein OsI_27548 [Oryza sativa Indica Group]
Length = 246
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 47/90 (52%), Gaps = 14/90 (15%)
Query: 534 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD--IKGQLHTR------------TKWE 579
KV ++G AVGR +DL YD L L+ MF + + TR ++
Sbjct: 146 VKVNLEGYAVGRKIDLKAHRSYDSLSQALQSMFHGFLSDGIATRDNELQQMEEGSKKRYV 205
Query: 580 IVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 609
+VY D+EGD MLVGD PW F VKR++I
Sbjct: 206 LVYEDNEGDRMLVGDVPWELFIASVKRLYI 235
>gi|294462071|gb|ADE76589.1| unknown [Picea sitchensis]
Length = 86
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 4/55 (7%)
Query: 574 TRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFS 628
+ T +++YTD+E DMMLVGDDPW EFCN+ +I I + +V+KM+P MFS
Sbjct: 2 SNTGPQVLYTDNEDDMMLVGDDPWQEFCNIACKILIYTHDEVQKMTPS----MFS 52
>gi|23343944|gb|AAN16891.1| auxin-responsive factor protein [Mirabilis jalapa]
Length = 137
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Query: 531 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 588
R+ KV G + GR+LD++ Y L EL +F ++ +L R+ ++V+ D E D
Sbjct: 52 RTFVKVHKMG-SFGRSLDISQFSSYQELRSELARLFGLENELKDSPRSGSQLVFVDREND 110
Query: 589 MMLVGDDPWHEFCNMVKRIFICSSQDV 615
++L+GDDPW EF V I I S Q+V
Sbjct: 111 VLLLGDDPWQEFVKTVGHIRILSPQEV 137
>gi|302763986|ref|XP_002965414.1| hypothetical protein SELMODRAFT_167506 [Selaginella moellendorffii]
gi|300166228|gb|EFJ32834.1| hypothetical protein SELMODRAFT_167506 [Selaginella moellendorffii]
Length = 409
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 59/125 (47%), Gaps = 17/125 (13%)
Query: 508 KKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD 567
K+ ++ + S Q+ +SN KV M G+ +GR +DL + Y L L++MF
Sbjct: 272 KQAAELATPDQGSNGGQAAASSNSLFVKVYMDGLPIGRKVDLDSNNSYVKLSSALKDMFS 331
Query: 568 --IKGQLHTR---------------TKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFIC 610
+ GQ ++ T++ + Y D +GD+MLVGD PW F VKR+ I
Sbjct: 332 GFVSGQPMSKQKSSGDVRSLFDGYETEYVLTYEDKDGDLMLVGDVPWRMFAATVKRLRIM 391
Query: 611 SSQDV 615
D
Sbjct: 392 KGSDA 396
>gi|242087139|ref|XP_002439402.1| hypothetical protein SORBIDRAFT_09g005830 [Sorghum bicolor]
gi|241944687|gb|EES17832.1| hypothetical protein SORBIDRAFT_09g005830 [Sorghum bicolor]
Length = 242
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 49/106 (46%), Gaps = 20/106 (18%)
Query: 534 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD----------------IKGQLHTRT- 576
KV M GV +GR LDL GYD L ++ +F I G L+
Sbjct: 126 VKVNMDGVPIGRKLDLGAHAGYDTLSAAVDHLFRGLLAAQASGSGGEQQPIAGILNGGGG 185
Query: 577 ---KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++ +VY DDEGD MLVGD PW F +R+ + S D+ S
Sbjct: 186 GGREYTLVYEDDEGDQMLVGDVPWPMFIASARRLRVLRSSDLNPSS 231
>gi|356522896|ref|XP_003530078.1| PREDICTED: auxin-responsive protein IAA26-like [Glycine max]
Length = 219
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 57/127 (44%), Gaps = 37/127 (29%)
Query: 534 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF-----DIK------------------- 569
K+ M GVA+GR +D+ Y+ L ++E+F ++K
Sbjct: 91 VKINMDGVAIGRKVDINAYDSYEKLSSAVDELFRGLLAEMKLSHIASSQCCSGQRDSCAG 150
Query: 570 -------------GQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVK 616
G L ++ +VY D+EGD MLVGD PWH F + VKR+ + S D+
Sbjct: 151 GIQNKEQEEKSNTGLLVGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSDLP 210
Query: 617 KMSPGSK 623
+ GSK
Sbjct: 211 AFTLGSK 217
>gi|224142858|ref|XP_002324753.1| predicted protein [Populus trichocarpa]
gi|222866187|gb|EEF03318.1| predicted protein [Populus trichocarpa]
Length = 237
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 20/119 (16%)
Query: 517 PKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF---------- 566
PKE S + N K+ M+GV +GR ++L Y+ L ++E+F
Sbjct: 108 PKEGSSLKPDSFRNDLFVKINMEGVPIGRKINLNAYDSYEKLSVAIDELFRGLLAETADP 167
Query: 567 --DIK--------GQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDV 615
D K G + ++ +VY D+EGD +LVGD PWH F + KR+ + S ++
Sbjct: 168 RNDKKVKEANANAGSVSGSGEYTLVYEDNEGDRILVGDVPWHMFVSTAKRLRVLKSTEI 226
>gi|195635917|gb|ACG37427.1| IAA7 - auxin-responsive Aux/IAA family member [Zea mays]
Length = 289
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 23/104 (22%)
Query: 535 KVQMQGVAVGRALDLTTLVGYDHL---IDEL--------------------EEMFDIKGQ 571
K+ M G+ +GR +DL+ L YD L +D+L +E I G
Sbjct: 164 KINMDGIPIGRKIDLSALGSYDELSLSVDKLFRGLLAAQQDPLAAGAKECSQEEVAISGL 223
Query: 572 LHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDV 615
L ++ +VY D EGD +LVGD PW F + VKR+ + + D+
Sbjct: 224 LDGTGEYTLVYEDYEGDRVLVGDVPWGMFVSSVKRLRVLKTSDL 267
>gi|226504822|ref|NP_001149993.1| LOC100283620 [Zea mays]
gi|195635913|gb|ACG37425.1| IAA6 - auxin-responsive Aux/IAA family member [Zea mays]
gi|414880576|tpg|DAA57707.1| TPA: IAA6-auxin-responsive Aux/IAA family member isoform 1 [Zea
mays]
gi|414880577|tpg|DAA57708.1| TPA: IAA6-auxin-responsive Aux/IAA family member isoform 2 [Zea
mays]
Length = 357
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 16/127 (12%)
Query: 519 ESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD--IKGQ----- 571
E+ K+ K+ M G+ +GR +DL Y+ L ++E+F ++ Q
Sbjct: 222 EASRKEKPACKKNPLVKINMDGIPIGRKVDLAAYDSYERLSLGVKELFHGFLQAQKDMSP 281
Query: 572 ---------LHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 622
L ++ +VY D+EGD MLVGD PW+ F + KR+ + S ++ K G+
Sbjct: 282 TAGKIFSQLLDGSGEYTLVYEDNEGDRMLVGDVPWNVFVSTAKRLRVLRSSELAKGLVGT 341
Query: 623 KLPMFSI 629
+ P ++
Sbjct: 342 RPPQIAV 348
>gi|302822822|ref|XP_002993067.1| hypothetical protein SELMODRAFT_187180 [Selaginella moellendorffii]
gi|300139159|gb|EFJ05906.1| hypothetical protein SELMODRAFT_187180 [Selaginella moellendorffii]
Length = 344
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 52/109 (47%), Gaps = 22/109 (20%)
Query: 534 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD--IKGQ-----------LHTRTK--- 577
KV M GV +GR ++L T Y+ L LEEMF I GQ L + TK
Sbjct: 224 VKVYMDGVPIGRKVNLRTHSSYERLSGALEEMFRRFISGQSGAGKAVAKDKLVSDTKKFN 283
Query: 578 ------WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 620
+ + Y D +GD+MLVGD PW F VKR+ I + ++P
Sbjct: 284 FIYGSDYVLTYEDKDGDLMLVGDVPWEMFVGAVKRLRIMKGSEAIGLAP 332
>gi|297814185|ref|XP_002874976.1| hypothetical protein ARALYDRAFT_912083 [Arabidopsis lyrata subsp.
lyrata]
gi|297320813|gb|EFH51235.1| hypothetical protein ARALYDRAFT_912083 [Arabidopsis lyrata subsp.
lyrata]
Length = 332
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 74 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 133
H F KVLT SD + ++HA P L+ NQ+ + +D +G WRF++ +
Sbjct: 32 HMFDKVLTPSDVGKLNRLVIPKQHAENYFP-LEGNQNGTVLDF--QDRNGKMWRFRYSYW 88
Query: 134 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 165
+ +++T GWS FV K+L AGDT F RG
Sbjct: 89 NSSQSYVMTKGWSRFVKEKKLFAGDTVSFHRG 120
>gi|357139461|ref|XP_003571300.1| PREDICTED: auxin-responsive protein IAA25-like [Brachypodium
distachyon]
Length = 245
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 48/93 (51%), Gaps = 16/93 (17%)
Query: 534 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF-----DIKGQLHTRTKWE--------- 579
KV ++G AVGR ++L GY L L+ MF D G++ TR E
Sbjct: 146 VKVNLEGYAVGRKINLAAHSGYASLSAALQSMFHGFLSDGYGRIATRDDEEDQLGMMIKN 205
Query: 580 --IVYTDDEGDMMLVGDDPWHEFCNMVKRIFIC 610
++Y D+EGD MLVGD PW F VKR++I
Sbjct: 206 YILLYEDNEGDRMLVGDVPWEMFIASVKRLYIA 238
>gi|297821108|ref|XP_002878437.1| indoleacetic acid-induced protein 30 [Arabidopsis lyrata subsp.
lyrata]
gi|297324275|gb|EFH54696.1| indoleacetic acid-induced protein 30 [Arabidopsis lyrata subsp.
lyrata]
Length = 172
Score = 63.5 bits (153), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 6/93 (6%)
Query: 523 KQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI------KGQLHTRT 576
+ C + KV M+GV +GR +DL +L GY LI L+ MF+ + ++ +
Sbjct: 74 QNECNSVGSFYVKVNMEGVPIGRKIDLLSLNGYHDLITTLDYMFNASILWAEEEEMCSEK 133
Query: 577 KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 609
+ Y D EGD M+VGD PW F + V+R+ I
Sbjct: 134 SHVLTYADKEGDWMMVGDVPWEMFLSSVRRLKI 166
>gi|242075446|ref|XP_002447659.1| hypothetical protein SORBIDRAFT_06g011767 [Sorghum bicolor]
gi|241938842|gb|EES11987.1| hypothetical protein SORBIDRAFT_06g011767 [Sorghum bicolor]
Length = 74
Score = 63.5 bits (153), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/42 (59%), Positives = 33/42 (78%)
Query: 241 GMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKV 282
G+R++MRFEGE++ ERRF+GT+V E+ P W DS WR LKV
Sbjct: 15 GVRFRMRFEGEEALERRFTGTIVRCENLDPLWPDSSWRYLKV 56
>gi|365818553|gb|AEX00365.1| IAA26 [Solanum lycopersicum]
Length = 287
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 24/113 (21%)
Query: 535 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD------------------------IKG 570
K+ M G+ +GR +DL Y L ++++F I G
Sbjct: 172 KINMDGIPIGRKVDLKAYDSYHKLSSAVDQLFRGLVAAQNDSSAGGNNEKKEDEEKAISG 231
Query: 571 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSK 623
L ++ +VY D+EGD MLVGD PWH F + VKR+ + S ++ ++ +K
Sbjct: 232 LLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSELSTLTRATK 284
>gi|242076896|ref|XP_002448384.1| hypothetical protein SORBIDRAFT_06g026370 [Sorghum bicolor]
gi|241939567|gb|EES12712.1| hypothetical protein SORBIDRAFT_06g026370 [Sorghum bicolor]
Length = 420
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 72 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 131
K H F KV+T SD + ++HA + P LD + L +D G WRF++
Sbjct: 96 KEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGLLLSFEDRAGKLWRFRYS 154
Query: 132 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 165
+ + +++T GWS FV KRL AGDT F RG
Sbjct: 155 YWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRG 188
>gi|357139129|ref|XP_003571137.1| PREDICTED: auxin-responsive protein IAA7-like [Brachypodium
distachyon]
Length = 274
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 52/103 (50%), Gaps = 22/103 (21%)
Query: 535 KVQMQGVAVGRALDLTTLVGYDHL---IDEL-------------------EEMFDIKGQL 572
K+ M G+ +GR +DLT L Y+ L +D+L +E+ I G L
Sbjct: 156 KINMDGIPIGRKIDLTALDSYEKLCVAVDKLFRHLLAAQNDPPAAGTECTQEVVAISGLL 215
Query: 573 HTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDV 615
++ +VY D EGD +LVGD PW F + VKR+ + + D+
Sbjct: 216 DGTGEYTLVYEDYEGDRVLVGDIPWGMFVSSVKRLRVLKTSDL 258
>gi|413949070|gb|AFW81719.1| hypothetical protein ZEAMMB73_752087 [Zea mays]
Length = 259
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 53/109 (48%), Gaps = 5/109 (4%)
Query: 72 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 131
K H F KV+T SD + ++HA + P LD + L +D G WRF++
Sbjct: 36 KEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGLLLSFEDRTGKPWRFRYS 94
Query: 132 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG----ENGELHVGVRC 176
+ + +++T GWS FV KRL AGDT F RG L + RC
Sbjct: 95 YWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRGISEAARDRLFIDWRC 143
>gi|323388567|gb|ADX60088.1| AUX/IAA transcription factor [Zea mays]
Length = 289
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 23/104 (22%)
Query: 535 KVQMQGVAVGRALDLTTLVGYDHL---IDEL--------------------EEMFDIKGQ 571
K+ M G+ +GR +DL+ L YD L +D+L +E I G
Sbjct: 164 KINMDGIPIGRKIDLSALGSYDELSLSVDKLFRGLLAAQQDPLAAGAKECSQEEVAISGL 223
Query: 572 LHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDV 615
L ++ +VY D EGD +LVGD PW F + VKR+ + + D+
Sbjct: 224 LDGTGEYTLVYEDYEGDRVLVGDVPWGMFVSSVKRLRVLKTSDL 267
>gi|302788514|ref|XP_002976026.1| hypothetical protein SELMODRAFT_450582 [Selaginella moellendorffii]
gi|300156302|gb|EFJ22931.1| hypothetical protein SELMODRAFT_450582 [Selaginella moellendorffii]
Length = 410
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 17/125 (13%)
Query: 508 KKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD 567
K+ ++ + S Q+ ++N KV M G+ +GR +DL + Y L L++MF
Sbjct: 273 KQAAELATPDQGSNGGQAAASNNSLFVKVYMDGLPIGRKVDLDSNNSYVKLSSALKDMFS 332
Query: 568 --IKGQLHTR---------------TKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFIC 610
+ GQ ++ T++ + Y D +GD+MLVGD PW F VKR+ I
Sbjct: 333 GFVSGQPMSKQKSSGDVRSLFDGYETEYVLTYEDKDGDLMLVGDVPWRMFAATVKRLRIM 392
Query: 611 SSQDV 615
D
Sbjct: 393 KGSDA 397
>gi|296083735|emb|CBI23724.3| unnamed protein product [Vitis vinifera]
Length = 283
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 72/159 (45%), Gaps = 26/159 (16%)
Query: 485 IISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSR---TKVQMQGV 541
+++ A A D K+D + K ++ ++ P +K + + KV M G+
Sbjct: 114 LVNQAKALAAEDDKADSEND---KFKDTLKKKPYTGSNKNNSTVKEKGHLGFVKVNMDGL 170
Query: 542 AVGRALDLTTLVGYDHLIDELEEMF------------DI-KGQ-------LHTRTKWEIV 581
+GR +DL Y L LE+MF D+ KGQ L +++ +
Sbjct: 171 PIGRKVDLDAHACYGTLAQTLEDMFFRHNTTMPPIRSDVEKGQSTNPSKLLDGSSEFVLT 230
Query: 582 YTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 620
Y D EGD MLVGD PW F + VKR+ I + + ++P
Sbjct: 231 YEDKEGDWMLVGDVPWGMFLSTVKRLRIMRTSEANGLAP 269
>gi|226508838|ref|NP_001145863.1| IAA16-auxin-responsive Aux/IAA family member [Zea mays]
gi|219884739|gb|ACL52744.1| unknown [Zea mays]
gi|413949356|gb|AFW82005.1| IAA16-auxin-responsive Aux/IAA family member [Zea mays]
Length = 228
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 46/100 (46%), Gaps = 18/100 (18%)
Query: 534 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF----------------DIKGQLHTRTK 577
KV M GV +GR LDL GYD L ++ +F + G L
Sbjct: 115 VKVNMDGVPIGRKLDLAAHAGYDTLSAAVDSLFRGLFAAQAAGPGGEQQAVAGILSGGGG 174
Query: 578 WE--IVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDV 615
E +VY DDEGD MLVGD PW F +R+ + S D+
Sbjct: 175 GEHTLVYEDDEGDQMLVGDVPWPMFVATARRLRVLKSSDL 214
>gi|223943565|gb|ACN25866.1| unknown [Zea mays]
gi|413936690|gb|AFW71241.1| IAA7-auxin-responsive Aux/IAA family member [Zea mays]
Length = 289
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 23/104 (22%)
Query: 535 KVQMQGVAVGRALDLTTLVGYDHL---IDEL--------------------EEMFDIKGQ 571
K+ M G+ +GR +DL+ L YD L +D+L +E I G
Sbjct: 164 KINMDGIPIGRKIDLSALGSYDELSLSVDKLFRGLLAAQQDPLAAGAKECSQEEVAISGL 223
Query: 572 LHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDV 615
L ++ +VY D EGD +LVGD PW F + VKR+ + + D+
Sbjct: 224 LDGTGEYTLVYEDYEGDRVLVGDVPWGMFVSSVKRLRVLKTSDL 267
>gi|195637724|gb|ACG38330.1| IAA16 - auxin-responsive Aux/IAA family member [Zea mays]
Length = 228
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 46/100 (46%), Gaps = 18/100 (18%)
Query: 534 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF----------------DIKGQLHTRTK 577
KV M GV +GR LDL GYD L ++ +F + G L
Sbjct: 115 VKVNMDGVPIGRKLDLAAHAGYDTLSAAVDSLFRGLFAAQAAGPGGEQQAVAGILSGGGG 174
Query: 578 WE--IVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDV 615
E +VY DDEGD MLVGD PW F +R+ + S D+
Sbjct: 175 GEHTLVYEDDEGDQMLVGDVPWPMFVATARRLRVLKSSDL 214
>gi|242064546|ref|XP_002453562.1| hypothetical protein SORBIDRAFT_04g008120 [Sorghum bicolor]
gi|241933393|gb|EES06538.1| hypothetical protein SORBIDRAFT_04g008120 [Sorghum bicolor]
Length = 292
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 23/104 (22%)
Query: 535 KVQMQGVAVGRALDLTTLVGYDHL---IDEL--------------------EEMFDIKGQ 571
K+ M G+ +GR +DL L YD L +D+L +E I G
Sbjct: 173 KINMDGIPIGRKIDLNALGSYDELSLSVDKLFRGLLAAQQDPLDASTKECSQEEVAISGL 232
Query: 572 LHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDV 615
L ++ +VY D EGD +LVGD PW F + VKR+ + + D+
Sbjct: 233 LDGTGEYTLVYEDYEGDRVLVGDVPWGMFVSSVKRLRVLKTSDL 276
>gi|15228681|ref|NP_191769.1| auxin-responsive protein IAA30 [Arabidopsis thaliana]
gi|46396010|sp|Q9M1R4.1|IAA30_ARATH RecName: Full=Auxin-responsive protein IAA30; AltName:
Full=Indoleacetic acid-induced protein 30
gi|6899920|emb|CAB71870.1| auxin-induced protein homolog [Arabidopsis thaliana]
gi|49616377|gb|AAT67085.1| IAA30 [Arabidopsis thaliana]
gi|225898739|dbj|BAH30500.1| hypothetical protein [Arabidopsis thaliana]
gi|284794605|gb|ADB93675.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|284794607|gb|ADB93676.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|284794609|gb|ADB93677.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|284794611|gb|ADB93678.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|284794613|gb|ADB93679.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|304322669|gb|ADL70787.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|304322671|gb|ADL70788.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|304322673|gb|ADL70789.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|304322675|gb|ADL70790.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|304322677|gb|ADL70791.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|304322679|gb|ADL70792.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|304322681|gb|ADL70793.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|304322683|gb|ADL70794.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|304322685|gb|ADL70795.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|304322687|gb|ADL70796.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|304322689|gb|ADL70797.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|304322691|gb|ADL70798.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|304322693|gb|ADL70799.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|332646789|gb|AEE80310.1| auxin-responsive protein IAA30 [Arabidopsis thaliana]
Length = 172
Score = 62.8 bits (151), Expect = 6e-07, Method: Composition-based stats.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 6/93 (6%)
Query: 523 KQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI------KGQLHTRT 576
+ C + KV M+GV +GR +DL +L GY LI L+ MF+ + + +
Sbjct: 74 QNECNSVGSFYVKVNMEGVPIGRKIDLLSLNGYHDLITTLDYMFNASILWAEEEDMCSEK 133
Query: 577 KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 609
+ Y D EGD M+VGD PW F + V+R+ I
Sbjct: 134 SHVLTYADKEGDWMMVGDVPWEMFLSSVRRLKI 166
>gi|302801263|ref|XP_002982388.1| hypothetical protein SELMODRAFT_179441 [Selaginella moellendorffii]
gi|300149980|gb|EFJ16633.1| hypothetical protein SELMODRAFT_179441 [Selaginella moellendorffii]
Length = 431
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 50/109 (45%), Gaps = 20/109 (18%)
Query: 535 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMF--DIKGQLHT------------------ 574
KV M GV +GR +DL YD L LE+MF I GQ T
Sbjct: 320 KVYMDGVPIGRKVDLKANNSYDKLSTVLEDMFLRFITGQNGTPEVSSIRDPGEKKLNFLQ 379
Query: 575 RTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSK 623
+ + + Y D +GD+MLVGD PW F VKR+ I + ++P K
Sbjct: 380 SSDFVLTYEDKDGDLMLVGDVPWGMFTGTVKRLRIMKGSEAIGLAPRDK 428
>gi|297826783|ref|XP_002881274.1| indoleacetic acid-induced protein 13 [Arabidopsis lyrata subsp.
lyrata]
gi|297327113|gb|EFH57533.1| indoleacetic acid-induced protein 13 [Arabidopsis lyrata subsp.
lyrata]
Length = 241
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 15/106 (14%)
Query: 535 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMF--------DIKGQ-------LHTRTKWE 579
KV M GVA+GR +DL+ Y++L LE+MF + Q L +++
Sbjct: 127 KVNMDGVAIGRKVDLSAHSSYENLSQTLEDMFFRTNPGTIGLTSQFTKPLRLLDGSSEFV 186
Query: 580 IVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLP 625
+ Y D EGD MLVGD PW F VKR+ + + + ++ ++ P
Sbjct: 187 LTYEDKEGDWMLVGDVPWRMFITSVKRLRVMKTSEANGLAARNQEP 232
>gi|297843018|ref|XP_002889390.1| hypothetical protein ARALYDRAFT_470180 [Arabidopsis lyrata subsp.
lyrata]
gi|297335232|gb|EFH65649.1| hypothetical protein ARALYDRAFT_470180 [Arabidopsis lyrata subsp.
lyrata]
Length = 354
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Query: 69 PRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRF 128
P K H F KV+T SD + ++HA P LD + + L +D +G WRF
Sbjct: 46 PPEKEHMFDKVVTPSDVGKLNRLVIPKQHAERYFP-LDSSNNQNGTLLNFQDRNGKMWRF 104
Query: 129 KHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 165
++ + + +++T GWS FV K+L AGD F RG
Sbjct: 105 RYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRG 141
>gi|302766253|ref|XP_002966547.1| hypothetical protein SELMODRAFT_168183 [Selaginella moellendorffii]
gi|300165967|gb|EFJ32574.1| hypothetical protein SELMODRAFT_168183 [Selaginella moellendorffii]
Length = 431
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 50/109 (45%), Gaps = 20/109 (18%)
Query: 535 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMF--DIKGQLHT------------------ 574
KV M GV +GR +DL YD L LE+MF I GQ T
Sbjct: 320 KVYMDGVPIGRKVDLKANNSYDKLSTVLEDMFLRFITGQNGTPEVSSIRDPGEKKLNFLQ 379
Query: 575 RTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSK 623
+ + + Y D +GD+MLVGD PW F VKR+ I + ++P K
Sbjct: 380 SSDFVLTYEDKDGDLMLVGDVPWGMFTGTVKRLRIMKGSEAIGLAPRDK 428
>gi|302780269|ref|XP_002971909.1| hypothetical protein SELMODRAFT_172524 [Selaginella moellendorffii]
gi|300160208|gb|EFJ26826.1| hypothetical protein SELMODRAFT_172524 [Selaginella moellendorffii]
Length = 345
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 51/109 (46%), Gaps = 22/109 (20%)
Query: 534 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD--IKGQ-----------LHTRTK--- 577
KV M GV +GR + L T Y+ L LEEMF I GQ L + TK
Sbjct: 225 VKVYMDGVPIGRKVSLRTHSSYERLSGALEEMFRRFISGQSGAGKAVAKDKLVSDTKKFN 284
Query: 578 ------WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 620
+ + Y D +GD+MLVGD PW F VKR+ I + ++P
Sbjct: 285 FIYGSDYVLTYEDKDGDLMLVGDVPWEMFVGAVKRLRIMKGSEAIGLAP 333
>gi|359477690|ref|XP_002285483.2| PREDICTED: auxin-responsive protein IAA13-like isoform 2 [Vitis
vinifera]
Length = 321
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 72/159 (45%), Gaps = 26/159 (16%)
Query: 485 IISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSR---TKVQMQGV 541
+++ A A D K+D + K ++ ++ P +K + + KV M G+
Sbjct: 152 LVNQAKALAAEDDKADSEND---KFKDTLKKKPYTGSNKNNSTVKEKGHLGFVKVNMDGL 208
Query: 542 AVGRALDLTTLVGYDHLIDELEEMF------------DI-KGQ-------LHTRTKWEIV 581
+GR +DL Y L LE+MF D+ KGQ L +++ +
Sbjct: 209 PIGRKVDLDAHACYGTLAQTLEDMFFRHNTTMPPIRSDVEKGQSTNPSKLLDGSSEFVLT 268
Query: 582 YTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 620
Y D EGD MLVGD PW F + VKR+ I + + ++P
Sbjct: 269 YEDKEGDWMLVGDVPWGMFLSTVKRLRIMRTSEANGLAP 307
>gi|351723637|ref|NP_001236774.1| uncharacterized protein LOC100305794 [Glycine max]
gi|255626619|gb|ACU13654.1| unknown [Glycine max]
Length = 217
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 54/127 (42%), Gaps = 37/127 (29%)
Query: 534 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF--------------------------- 566
K+ M GV +GR +D+ Y+ L ++E+F
Sbjct: 89 VKINMDGVPIGRKVDINAYDSYEKLSSAVDELFRGLLAEMKLSHIGSSQCCSGQRDSCAG 148
Query: 567 ----------DIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVK 616
KG L ++ +VY D+EGD MLVGD PWH F + VKR+ + S D+
Sbjct: 149 GIQNKEQEEKSNKGLLVGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSDLP 208
Query: 617 KMSPGSK 623
+ GSK
Sbjct: 209 AFTLGSK 215
>gi|115470909|ref|NP_001059053.1| Os07g0183200 [Oryza sativa Japonica Group]
gi|75152496|sp|Q8H507.1|Y7832_ORYSJ RecName: Full=B3 domain-containing protein Os07g0183200
gi|25553610|dbj|BAC24870.1| putative auxin response factor 6a [Oryza sativa Japonica Group]
gi|50509189|dbj|BAD30343.1| putative auxin response factor 6a [Oryza sativa Japonica Group]
gi|113610589|dbj|BAF20967.1| Os07g0183200 [Oryza sativa Japonica Group]
Length = 407
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 68/163 (41%), Gaps = 13/163 (7%)
Query: 22 PSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRP----KVHSFS 77
P LC V + L A+ T+E YA+ITL P + P ++ F
Sbjct: 66 PRVFLCTVAAVRLRADALTNEAYAEITLDPVADHDVPRLAPAPAPAPAAAAGGQQLRYFV 125
Query: 78 KVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPR 137
K L SD FS A PPL + Q L+ KDLHG F + +G +
Sbjct: 126 KTLMISDFDFRIRFSAPMADAKGVFPPL--VDAKAVQPLLVKDLHGSPMTFDYGRKG--K 181
Query: 138 RHLLTTGWSTFVTSKRLVAGDTFVFL-----RGENGELHVGVR 175
R L W F V GD+ +F+ ++GEL+VGVR
Sbjct: 182 RVTLAKVWKKFRDDMDFVDGDSVIFMRRRDDDDDDGELYVGVR 224
>gi|125557468|gb|EAZ03004.1| hypothetical protein OsI_25145 [Oryza sativa Indica Group]
Length = 407
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 68/163 (41%), Gaps = 13/163 (7%)
Query: 22 PSKILCRVVNIHLMAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRP----KVHSFS 77
P LC V + L A+ T+E YA+ITL P + P ++ F
Sbjct: 66 PRVFLCTVAAVRLRADALTNEAYAEITLDPVADHDVPRLAPAPAPAPAAAAGGQQLRYFV 125
Query: 78 KVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPR 137
K L SD FS A PPL + Q L+ KDLHG F + +G +
Sbjct: 126 KTLMISDFDFRIRFSAPMADAKGVFPPL--VDAKAVQPLLVKDLHGSPMTFDYGRKG--K 181
Query: 138 RHLLTTGWSTFVTSKRLVAGDTFVFL-----RGENGELHVGVR 175
R L W F V GD+ +F+ ++GEL+VGVR
Sbjct: 182 RVTLAKVWKKFRDDMDFVDGDSVIFMRRRDDDDDDGELYVGVR 224
>gi|326491285|dbj|BAK05742.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 397
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 72 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 131
K H F KV+T SD + ++HA + P LD + L +D G WRF++
Sbjct: 86 KEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGLLLSFEDRGGKLWRFRYS 144
Query: 132 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 165
+ + +++T GWS FV KRL AGDT F RG
Sbjct: 145 YWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRG 178
>gi|326507026|dbj|BAJ95590.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 168
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 63/142 (44%), Gaps = 1/142 (0%)
Query: 468 SAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCL 527
SAP+ V+ T ++ + + A+++ + + V +S
Sbjct: 26 SAPAVAFGVTKATLPLFLLRDDDGDDSGEDGTAGARDWGTSNKRKRLVGWPPVKSAHRPR 85
Query: 528 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEG 587
+ + KV+M+GV +GR +DL+ Y L L MF +H + + Y D +G
Sbjct: 86 SHHNGHVKVKMEGVPIGRMVDLSRHASYHELHHTLRLMFP-SSTVHHADPYAVTYEDGDG 144
Query: 588 DMMLVGDDPWHEFCNMVKRIFI 609
D MLVGD PW EF KR+ I
Sbjct: 145 DWMLVGDVPWEEFSKSAKRLKI 166
>gi|225453662|ref|XP_002268399.1| PREDICTED: B3 domain-containing transcription factor NGA1-like
[Vitis vinifera]
Length = 461
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 78/164 (47%), Gaps = 6/164 (3%)
Query: 74 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 133
H F KV+T SD + ++HA + P LD + S L +D G WRF++ +
Sbjct: 137 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSASDKGLLLNFEDRDGKPWRFRYSYW 195
Query: 134 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLR--GENGELHVGVRCLARQQSSMPSSVISS 191
+ +++T GWS FV K+L AGD F R GE+G+ + + R + P+S+
Sbjct: 196 NSSQSYVMTKGWSRFVKEKKLDAGDIVSFERGVGESGKDRLYIDWRRRPDAPDPTSL--- 252
Query: 192 QSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVN 235
+HL S +V ++ + P S + + +++ +N
Sbjct: 253 SHLHLPTQLPFSQSVRWGRLYSLPQSPSMSMNMPQGHDHMQQLN 296
>gi|255574879|ref|XP_002528346.1| Auxin-responsive protein IAA13, putative [Ricinus communis]
gi|223532214|gb|EEF34018.1| Auxin-responsive protein IAA13, putative [Ricinus communis]
Length = 318
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 48/104 (46%), Gaps = 18/104 (17%)
Query: 535 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMF--------DIKGQLHTRTK--------- 577
KV M G+ +GR +DL Y+ L LE+MF G+ TK
Sbjct: 201 KVNMDGIPIGRKVDLNAHASYETLAQTLEDMFFRSTPSINSTGGEKQQSTKPSKLLDGSS 260
Query: 578 -WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 620
+ + Y D EGD MLVGD PW F VKR+ I + + ++P
Sbjct: 261 EFVLTYEDKEGDWMLVGDVPWGMFLTSVKRLRIMRTSEANGLAP 304
>gi|326531600|dbj|BAJ97804.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 322
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 74 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 133
H F KV+T SD + ++HA + P LD + + L +D G WRF++ +
Sbjct: 38 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDASSTDKGLLLSFEDRAGKPWRFRYSYW 96
Query: 134 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 165
+ +++T GWS FV KRL AGDT F RG
Sbjct: 97 NSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRG 128
>gi|115435010|ref|NP_001042263.1| Os01g0190300 [Oryza sativa Japonica Group]
gi|75263885|sp|Q9LG86.1|IAA2_ORYSJ RecName: Full=Auxin-responsive protein IAA2; AltName:
Full=Indoleacetic acid-induced protein 2
gi|9049459|dbj|BAA99424.1| putative auxin-induced protein IAA18 [Oryza sativa Japonica Group]
gi|113531794|dbj|BAF04177.1| Os01g0190300 [Oryza sativa Japonica Group]
gi|125569344|gb|EAZ10859.1| hypothetical protein OsJ_00698 [Oryza sativa Japonica Group]
gi|215713409|dbj|BAG94546.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 238
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 21/101 (20%)
Query: 534 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRT----------------- 576
K+ M GV +GR +DL GY L ++++F +G L ++
Sbjct: 121 VKINMDGVPIGRKVDLAAYGGYAQLSAAVDKLF--RGLLAAQSAAADGEADAAAAGEMVG 178
Query: 577 --KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDV 615
++ +VY DDEGD MLVGD PW F KR+ + S D+
Sbjct: 179 GGEYTLVYEDDEGDRMLVGDVPWQMFIATAKRLRVLKSSDL 219
>gi|116311012|emb|CAH67945.1| H0303A11-B0406H05.5 [Oryza sativa Indica Group]
Length = 287
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 72 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 131
K H F KV+T SD + ++HA + P LD + L +D G WRF++
Sbjct: 83 KEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSAANEKGLLLSFEDRTGKLWRFRYS 141
Query: 132 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 165
+ + +++T GWS FV KRL AGDT F RG
Sbjct: 142 YWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRG 175
>gi|449465437|ref|XP_004150434.1| PREDICTED: auxin-induced protein 22B-like [Cucumis sativus]
gi|449519671|ref|XP_004166858.1| PREDICTED: auxin-induced protein 22B-like [Cucumis sativus]
Length = 186
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 58/119 (48%), Gaps = 8/119 (6%)
Query: 509 KQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI 568
++ +QV K++++ + + KV M G R +DL+ GY L+ LE+MF
Sbjct: 69 RKNTLQV--KKTEATTTAVDGGGIYVKVSMDGAPYLRKIDLSVYKGYPELLKALEDMFKF 126
Query: 569 K-GQLHTRTKWEI-----VYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPG 621
GQ R ++ Y D +GD MLVGD PW F + KR+ I +V +S G
Sbjct: 127 TIGQYSEREGYKGSDFAPTYEDKDGDWMLVGDVPWQMFISSCKRMRIMKGSEVGGLSCG 185
>gi|15223284|ref|NP_171611.1| B3 domain-containing transcription factor NGA3 [Arabidopsis
thaliana]
gi|75192354|sp|Q9MAN1.1|NGA3_ARATH RecName: Full=B3 domain-containing transcription factor NGA3;
AltName: Full=Protein NGATHA3
gi|6715649|gb|AAF26476.1|AC007323_17 T25K16.3 [Arabidopsis thaliana]
gi|227060706|gb|ACP18973.1| NGATHA3 [Arabidopsis thaliana]
gi|332189098|gb|AEE27219.1| B3 domain-containing transcription factor NGA3 [Arabidopsis
thaliana]
Length = 358
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Query: 69 PRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRF 128
P K H F KV+T SD + ++HA P LD + + L +D +G WRF
Sbjct: 49 PPEKEHMFDKVVTPSDVGKLNRLVIPKQHAERYFP-LDSSNNQNGTLLNFQDRNGKMWRF 107
Query: 129 KHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 165
++ + + +++T GWS FV K+L AGD F RG
Sbjct: 108 RYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRG 144
>gi|297824785|ref|XP_002880275.1| indoleacetic acid-induced protein 20 [Arabidopsis lyrata subsp.
lyrata]
gi|297326114|gb|EFH56534.1| indoleacetic acid-induced protein 20 [Arabidopsis lyrata subsp.
lyrata]
Length = 167
Score = 62.0 bits (149), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 526 CLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI------KGQLHTRTKWE 579
C + KV M+GV +GR +DL +L GY LI L+ MF+ + +
Sbjct: 71 CHSVGSFYVKVNMEGVPIGRKIDLMSLNGYHDLIRTLDFMFNASILWAEEEDMCNEKSHV 130
Query: 580 IVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 609
+ Y D EGD M+VGD PW F + V+R+ I
Sbjct: 131 LTYADKEGDWMMVGDVPWEMFLSTVRRLKI 160
>gi|32492293|emb|CAE04153.1| OSJNBa0088A01.1 [Oryza sativa Japonica Group]
Length = 293
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 72 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 131
K H F KV+T SD + ++HA + P LD + L +D G WRF++
Sbjct: 83 KEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSAANEKGLLLSFEDRTGKLWRFRYS 141
Query: 132 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 165
+ + +++T GWS FV KRL AGDT F RG
Sbjct: 142 YWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRG 175
>gi|356503640|ref|XP_003520614.1| PREDICTED: auxin-responsive protein IAA13-like [Glycine max]
Length = 244
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 51/110 (46%), Gaps = 24/110 (21%)
Query: 535 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI-------KGQ---------------- 571
KV+M G+ +GR +DL Y+ L LE+MFD KG
Sbjct: 121 KVKMDGIPIGRKVDLGAHGSYETLAQTLEDMFDESATVLTHKGSNGEDHGTEVGADGHSK 180
Query: 572 -LHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 620
LH + + Y D EGD MLVGD PW F N V+R+ I + + ++P
Sbjct: 181 LLHGSSDLVLTYEDKEGDWMLVGDVPWWMFLNSVRRLRIMRTPEANGLAP 230
>gi|255548896|ref|XP_002515504.1| ATP binding protein, putative [Ricinus communis]
gi|223545448|gb|EEF46953.1| ATP binding protein, putative [Ricinus communis]
Length = 895
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Query: 529 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI--KGQLHTRTKWEIVYTDDE 586
SN KV+M+GVA+ R +DL Y L + L MF KG + T + + Y D +
Sbjct: 144 SNYKYVKVKMEGVAIARKIDLRLFHSYQTLTNFLISMFGKCEKGDDDSTTNYTLTYQDKD 203
Query: 587 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIE 630
GD +L GD PW F V+R+ + + + + S K P F +E
Sbjct: 204 GDWLLAGDVPWQTFMESVQRLELVRNGGLPRPSL-CKFPCFLME 246
>gi|302398583|gb|ADL36586.1| ARF domain class transcription factor [Malus x domestica]
Length = 295
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 16/102 (15%)
Query: 535 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMF----------DIKGQ------LHTRTKW 578
KV M G+ +GR ++L+ Y+ L +LE+MF +++G L ++
Sbjct: 180 KVNMDGIPIGRKVNLSAHSSYEALAQKLEDMFGPSTHGSGGQEMEGATRPSKLLDGSFEF 239
Query: 579 EIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 620
+ Y D +GD MLVGD PW F VKR+ I + + ++P
Sbjct: 240 ALTYEDKDGDWMLVGDVPWEMFLGTVKRLRIMRTSEANGLAP 281
>gi|413924061|gb|AFW63993.1| hypothetical protein ZEAMMB73_893762 [Zea mays]
Length = 294
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 51/109 (46%), Gaps = 17/109 (15%)
Query: 529 SNRSRT----KVQMQGVAVGRALDLTTLVGYDHLIDELEEMF-------------DIKGQ 571
S + RT KV M+G +GR +DL Y L LE MF
Sbjct: 169 SKKGRTVGWVKVNMEGDIIGRKVDLNAHRSYKTLASALELMFMKPSIGLCTSSSSKTLKL 228
Query: 572 LHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 620
L + +++++ Y D +GD MLVGD PW F VKR+ I + D K + P
Sbjct: 229 LDSSSEYQLTYEDRDGDWMLVGDVPWEMFVGSVKRLKIMRTSDAKGLGP 277
>gi|297723391|ref|NP_001174059.1| Os04g0581400 [Oryza sativa Japonica Group]
gi|239983845|sp|Q7F9W2.2|Y4814_ORYSJ RecName: Full=B3 domain-containing protein Os04g0581400
gi|255675715|dbj|BAH92787.1| Os04g0581400 [Oryza sativa Japonica Group]
Length = 316
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 72 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 131
K H F KV+T SD + ++HA + P LD + L +D G WRF++
Sbjct: 106 KEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSAANEKGLLLSFEDRTGKLWRFRYS 164
Query: 132 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 165
+ + +++T GWS FV KRL AGDT F RG
Sbjct: 165 YWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRG 198
>gi|429326544|gb|AFZ78612.1| hypothetical protein [Populus tomentosa]
Length = 204
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 46/92 (50%), Gaps = 6/92 (6%)
Query: 534 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK-GQLHTRTKW---EIV--YTDDEG 587
KV M G R +DL GY L++ +EEMF K G+ R + E V Y D +G
Sbjct: 110 VKVSMDGAPYLRKIDLKVYKGYPELLEVVEEMFKFKVGEYSEREGYNGSEYVPTYEDKDG 169
Query: 588 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
D MLVGD PW F N KR+ I + + +
Sbjct: 170 DWMLVGDVPWEMFINSCKRLRIMKESEARGLG 201
>gi|299882830|gb|ADJ57333.1| RAV-like 1 protein [Oryza sativa Japonica Group]
Length = 400
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 72 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 131
K H F KV+T SD + ++HA + P LD + L +D G WRF++
Sbjct: 83 KEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSAANEKGLLLSFEDRTGKLWRFRYS 141
Query: 132 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 165
+ + +++T GWS FV KRL AGDT F RG
Sbjct: 142 YWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRG 175
>gi|125549456|gb|EAY95278.1| hypothetical protein OsI_17101 [Oryza sativa Indica Group]
Length = 400
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 72 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 131
K H F KV+T SD + ++HA + P LD + L +D G WRF++
Sbjct: 83 KEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSAANEKGLLLSFEDRTGKLWRFRYS 141
Query: 132 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 165
+ + +++T GWS FV KRL AGDT F RG
Sbjct: 142 YWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRG 175
>gi|226509392|ref|NP_001141156.1| hypothetical protein [Zea mays]
gi|194702982|gb|ACF85575.1| unknown [Zea mays]
gi|413924062|gb|AFW63994.1| hypothetical protein ZEAMMB73_893762 [Zea mays]
Length = 293
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 51/109 (46%), Gaps = 17/109 (15%)
Query: 529 SNRSRT----KVQMQGVAVGRALDLTTLVGYDHLIDELEEMF-------------DIKGQ 571
S + RT KV M+G +GR +DL Y L LE MF
Sbjct: 168 SKKGRTVGWVKVNMEGDIIGRKVDLNAHRSYKTLASALELMFMKPSIGLCTSSSSKTLKL 227
Query: 572 LHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 620
L + +++++ Y D +GD MLVGD PW F VKR+ I + D K + P
Sbjct: 228 LDSSSEYQLTYEDRDGDWMLVGDVPWEMFVGSVKRLKIMRTSDAKGLGP 276
>gi|326517390|dbj|BAK00062.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 228
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 47/105 (44%), Gaps = 19/105 (18%)
Query: 534 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD-------------------IKGQLHT 574
K+ M G+ +GR +DL Y L ++ +F+ I G L
Sbjct: 110 VKINMDGIPIGRKVDLKAHDSYGKLAAAVDHLFEGLLAAQRDESSCAGEKPAAITGLLDG 169
Query: 575 RTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
++ +VY DDEGD MLVGD PW F KR+ + S D+ S
Sbjct: 170 SGEYTLVYEDDEGDQMLVGDVPWDMFIATAKRLRVLRSSDLNASS 214
>gi|304322486|gb|ADL70730.1| indole-3-acetic acid inducible 20 [Arabidopsis thaliana]
Length = 171
Score = 61.6 bits (148), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 535 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI------KGQLHTRTKWEIVYTDDEGD 588
KV M+GV +GR +DL +L GY LI L+ MF+ + + + Y D EGD
Sbjct: 88 KVNMEGVPIGRKIDLMSLNGYRDLIRTLDFMFNASILWAEEEDMCNEKSHVLTYADKEGD 147
Query: 589 MMLVGDDPWHEFCNMVKRIFI 609
M+VGD PW F + V+R+ I
Sbjct: 148 WMMVGDVPWEMFLSTVRRLKI 168
>gi|15226476|ref|NP_182222.1| auxin-responsive protein IAA20 [Arabidopsis thaliana]
gi|11131099|sp|O24410.2|IAA20_ARATH RecName: Full=Auxin-responsive protein IAA20; AltName:
Full=Indoleacetic acid-induced protein 20
gi|13194770|gb|AAK15547.1|AF348576_1 auxin-induced protein IAA20 [Arabidopsis thaliana]
gi|3522954|gb|AAC34236.1| auxin-induced protein (IAA20) [Arabidopsis thaliana]
gi|26449566|dbj|BAC41909.1| putative auxin-induced protein [Arabidopsis thaliana]
gi|330255689|gb|AEC10783.1| auxin-responsive protein IAA20 [Arabidopsis thaliana]
Length = 175
Score = 61.6 bits (148), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 535 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI------KGQLHTRTKWEIVYTDDEGD 588
KV M+GV +GR +DL +L GY LI L+ MF+ + + + Y D EGD
Sbjct: 88 KVNMEGVPIGRKIDLMSLNGYRDLIRTLDFMFNASILWAEEEDMCNEKSHVLTYADKEGD 147
Query: 589 MMLVGDDPWHEFCNMVKRIFI 609
M+VGD PW F + V+R+ I
Sbjct: 148 WMMVGDVPWEMFLSTVRRLKI 168
>gi|297707657|gb|ADB93651.2| indole-3-acetic acid inducible 20 [Arabidopsis thaliana]
Length = 173
Score = 61.6 bits (148), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 535 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI------KGQLHTRTKWEIVYTDDEGD 588
KV M+GV +GR +DL +L GY LI L+ MF+ + + + Y D EGD
Sbjct: 88 KVNMEGVPIGRKIDLMSLNGYRDLIRTLDFMFNASILWAEEEDMCNEKSHVLTYADKEGD 147
Query: 589 MMLVGDDPWHEFCNMVKRIFI 609
M+VGD PW F + V+R+ I
Sbjct: 148 WMMVGDVPWEMFLSTVRRLKI 168
>gi|115450383|ref|NP_001048792.1| Os03g0120900 [Oryza sativa Japonica Group]
gi|75246354|sp|Q8LMR9.1|Y3209_ORYSJ RecName: Full=B3 domain-containing protein Os03g0120900
gi|21426118|gb|AAM52315.1|AC105363_4 Putative RAV-like B3 domain DNA binding protein [Oryza sativa
Japonica Group]
gi|108705902|gb|ABF93697.1| B3 DNA binding domain containing protein, expressed [Oryza sativa
Japonica Group]
gi|113547263|dbj|BAF10706.1| Os03g0120900 [Oryza sativa Japonica Group]
Length = 311
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 72 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 131
K H F KV+T SD + ++HA + P LD + L +D G WRF++
Sbjct: 33 KEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAASNEKGLLLSFEDRTGKPWRFRYS 91
Query: 132 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 165
+ + +++T GWS FV KRL AGDT F RG
Sbjct: 92 YWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRG 125
>gi|225433277|ref|XP_002285481.1| PREDICTED: auxin-responsive protein IAA13-like isoform 1 [Vitis
vinifera]
Length = 314
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 48/98 (48%), Gaps = 12/98 (12%)
Query: 535 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMF------------DIKGQLHTRTKWEIVY 582
KV M G+ +GR +DL Y L LE+MF + L +++ + Y
Sbjct: 203 KVNMDGLPIGRKVDLDAHACYGTLAQTLEDMFFRHNTTMPRQSTNPSKLLDGSSEFVLTY 262
Query: 583 TDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 620
D EGD MLVGD PW F + VKR+ I + + ++P
Sbjct: 263 EDKEGDWMLVGDVPWGMFLSTVKRLRIMRTSEANGLAP 300
>gi|125542174|gb|EAY88313.1| hypothetical protein OsI_09772 [Oryza sativa Indica Group]
Length = 308
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 72 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 131
K H F KV+T SD + ++HA + P LD + L +D G WRF++
Sbjct: 33 KEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAASNEKGLLLSFEDRTGKPWRFRYS 91
Query: 132 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 165
+ + +++T GWS FV KRL AGDT F RG
Sbjct: 92 YWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRG 125
>gi|225426506|ref|XP_002271695.1| PREDICTED: B3 domain-containing protein Os03g0120900-like [Vitis
vinifera]
Length = 411
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 60/117 (51%), Gaps = 3/117 (2%)
Query: 74 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 133
H F KV+T SD + ++HA + P LD + + L +D G WRF++ +
Sbjct: 110 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSANEKGLLLNFEDRSGKPWRFRYSYW 168
Query: 134 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLR--GENGELHVGVRCLARQQSSMPSSV 188
+ +++T GWS FV K+L AGD F R GE+G+ + + R + PSS+
Sbjct: 169 NSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGVGESGKDRLYIDWRRRPDAPEPSSL 225
>gi|449458912|ref|XP_004147190.1| PREDICTED: LOW QUALITY PROTEIN: auxin-responsive protein IAA13-like
[Cucumis sativus]
Length = 301
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 16/129 (12%)
Query: 507 EKKQEQVQVSPKESQSKQSCLTSNRSR---TKVQMQGVAVGRALDLTTLVGYDHLIDELE 563
E+K++Q K++ ++C + KV + GV +GR +DL Y+ L LE
Sbjct: 166 EEKKDQ----SKDTLKNKTCDVDGKGHLGFVKVNVDGVVIGRKVDLNAHSCYETLALMLE 221
Query: 564 EMF------DIKGQ---LHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 614
+MF K Q L +++ + Y D EGD MLVGD PW F N V+R+ I + +
Sbjct: 222 DMFFSGDKEQAKKQSKLLDGSSEFVLTYEDREGDWMLVGDVPWGMFVNSVRRLRIMRTSE 281
Query: 615 VKKMSPGSK 623
++P S+
Sbjct: 282 ANGLAPRSQ 290
>gi|2618729|gb|AAB84357.1| IAA20, partial [Arabidopsis thaliana]
Length = 166
Score = 61.6 bits (148), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 535 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI------KGQLHTRTKWEIVYTDDEGD 588
KV M+GV +GR +DL +L GY LI L+ MF+ + + + Y D EGD
Sbjct: 79 KVNMEGVPIGRKIDLMSLNGYRDLIRTLDFMFNASILWAEEEDMCNEKSHVLTYADKEGD 138
Query: 589 MMLVGDDPWHEFCNMVKRIFI 609
M+VGD PW F + V+R+ I
Sbjct: 139 WMMVGDVPWEMFLSTVRRLKI 159
>gi|359480055|ref|XP_002269922.2| PREDICTED: auxin-responsive protein IAA11-like [Vitis vinifera]
Length = 296
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 48/99 (48%), Gaps = 13/99 (13%)
Query: 535 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD-----IKGQLHTR--------TKWEIV 581
KV M G+ +GR +DL+ Y+ L LEEMF + TR + + +
Sbjct: 184 KVNMDGIPIGRKVDLSAHSCYETLAKTLEEMFQGPTTTVNAIESTRPSKLLDGSSDFVLT 243
Query: 582 YTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 620
Y D EGD MLVGD PW F +R+ I + D ++P
Sbjct: 244 YEDKEGDWMLVGDVPWGMFLGSARRLRIMRTSDANGLAP 282
>gi|304322484|gb|ADL70729.1| indole-3-acetic acid inducible 20 [Arabidopsis thaliana]
Length = 174
Score = 61.6 bits (148), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 535 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI------KGQLHTRTKWEIVYTDDEGD 588
KV M+GV +GR +DL +L GY LI L+ MF+ + + + Y D EGD
Sbjct: 88 KVNMEGVPIGRKIDLMSLNGYRDLIRTLDFMFNASILWAEEEDMCNEKSHVLTYADKEGD 147
Query: 589 MMLVGDDPWHEFCNMVKRIFI 609
M+VGD PW F + V+R+ I
Sbjct: 148 WMMVGDVPWEMFLSTVRRLKI 168
>gi|304322480|gb|ADL70727.1| indole-3-acetic acid inducible 20 [Arabidopsis thaliana]
Length = 172
Score = 61.6 bits (148), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 535 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI------KGQLHTRTKWEIVYTDDEGD 588
KV M+GV +GR +DL +L GY LI L+ MF+ + + + Y D EGD
Sbjct: 88 KVNMEGVPIGRKIDLMSLNGYRDLIRTLDFMFNASILWAEEEDMCNEKSHVLTYADKEGD 147
Query: 589 MMLVGDDPWHEFCNMVKRIFI 609
M+VGD PW F + V+R+ I
Sbjct: 148 WMMVGDVPWEMFLSTVRRLKI 168
>gi|304322470|gb|ADL70722.1| indole-3-acetic acid inducible 20 [Arabidopsis thaliana]
gi|304322476|gb|ADL70725.1| indole-3-acetic acid inducible 20 [Arabidopsis thaliana]
gi|304322488|gb|ADL70731.1| indole-3-acetic acid inducible 20 [Arabidopsis thaliana]
gi|304322494|gb|ADL70734.1| indole-3-acetic acid inducible 20 [Arabidopsis thaliana]
Length = 171
Score = 61.6 bits (148), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 535 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI------KGQLHTRTKWEIVYTDDEGD 588
KV M+GV +GR +DL +L GY LI L+ MF+ + + + Y D EGD
Sbjct: 88 KVNMEGVPIGRKIDLMSLNGYRDLIRTLDFMFNASILWAEEEDMCNEKSHVLTYADKEGD 147
Query: 589 MMLVGDDPWHEFCNMVKRIFI 609
M+VGD PW F + V+R+ I
Sbjct: 148 WMMVGDVPWEMFLSTVRRLKI 168
>gi|357165429|ref|XP_003580380.1| PREDICTED: B3 domain-containing protein Os02g0683500-like
[Brachypodium distachyon]
Length = 413
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 72 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 131
K H F KV+T SD + ++HA + P LD + L +D G WRF++
Sbjct: 96 KEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSAANEKGLLLSFEDRTGKLWRFRYS 154
Query: 132 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 165
+ + +++T GWS FV KRL AGDT F RG
Sbjct: 155 YWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRG 188
>gi|414864444|tpg|DAA43001.1| TPA: hypothetical protein ZEAMMB73_938349 [Zea mays]
Length = 327
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 72 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 131
K H F KV+T SD + ++HA P LD + L +D G WRF++
Sbjct: 34 KEHMFDKVVTPSDVGKLNRLVIPKQHAERYFP-LDAAANDKGLLLSFEDRAGKPWRFRYS 92
Query: 132 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 165
+ + +++T GWS FV KRL AGDT F RG
Sbjct: 93 YWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRG 126
>gi|363806854|ref|NP_001242293.1| uncharacterized protein LOC100811879 [Glycine max]
gi|255642213|gb|ACU21371.1| unknown [Glycine max]
Length = 187
Score = 61.2 bits (147), Expect = 2e-06, Method: Composition-based stats.
Identities = 49/171 (28%), Positives = 70/171 (40%), Gaps = 7/171 (4%)
Query: 458 GIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSP 517
G+E+ P ++P + + + S I+ D + S+ ++ + K Q V P
Sbjct: 7 GLEITTELRLGLPGGELPDKNEKMKKRVFSEINQG-DENSSSEEDRKIQTKNQ-VVGWPP 64
Query: 518 KESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK 577
S K++ + + KV M G R +DL GY L LE+ F G
Sbjct: 65 VCSYRKKNTINETKMYVKVSMDGAPFLRKIDLAMRKGYSELALALEKFFGCYGIGSALKD 124
Query: 578 WEIV-----YTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSK 623
E V Y D +GD MLVGD PW F KR+ I D K P K
Sbjct: 125 EENVVQVPIYEDKDGDWMLVGDVPWEMFIESCKRLRIMKRSDAKGFDPQPK 175
>gi|414867524|tpg|DAA46081.1| TPA: hypothetical protein ZEAMMB73_334184 [Zea mays]
Length = 273
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 55/121 (45%), Gaps = 19/121 (15%)
Query: 67 DSPRP--------KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQE--- 115
DS RP K H F KV+T SD + ++HA P LD + + +
Sbjct: 13 DSERPRGGVAWLEKEHMFEKVVTPSDVGKLNRLVIPKQHAERYFPALDASAAAASASASA 72
Query: 116 --------LVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGEN 167
L +D G WRF++ + + +++T GWS FV KRL AGDT +F RG
Sbjct: 73 GGGKAGLVLSFEDRAGKAWRFRYSYWNSSQSYVMTKGWSRFVKEKRLGAGDTVLFARGAG 132
Query: 168 G 168
Sbjct: 133 A 133
>gi|147768788|emb|CAN73636.1| hypothetical protein VITISV_009603 [Vitis vinifera]
Length = 505
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 60/117 (51%), Gaps = 3/117 (2%)
Query: 74 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 133
H F KV+T SD + ++HA + P LD + + L +D G WRF++ +
Sbjct: 110 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSANEKGLLLNFEDRSGKPWRFRYSYW 168
Query: 134 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLR--GENGELHVGVRCLARQQSSMPSSV 188
+ +++T GWS FV K+L AGD F R GE+G+ + + R + PSS+
Sbjct: 169 NSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGVGESGKDRLYIDWRRRPDAPEPSSL 225
>gi|304322492|gb|ADL70733.1| indole-3-acetic acid inducible 20 [Arabidopsis thaliana]
Length = 168
Score = 61.2 bits (147), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 535 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI------KGQLHTRTKWEIVYTDDEGD 588
KV M+GV +GR +DL +L GY LI L+ MF+ + + + Y D EGD
Sbjct: 85 KVNMEGVPIGRKIDLMSLNGYRDLIRTLDFMFNASILWAEEEDMCNEKSHVLTYADKEGD 144
Query: 589 MMLVGDDPWHEFCNMVKRIFI 609
M+VGD PW F + V+R+ I
Sbjct: 145 WMMVGDVPWEMFLSTVRRLKI 165
>gi|320098853|gb|ADW10155.1| putative auxin-responsive protein IAA1 [Schiedea membranacea]
gi|320098855|gb|ADW10156.1| putative auxin-responsive protein IAA1 [Schiedea membranacea]
Length = 102
Score = 61.2 bits (147), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 523 KQSCLTSNRS-RTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTR----TK 577
++SC S + KV M G R +DL Y+ L++ LE+MF+ K T T+
Sbjct: 5 RKSCFQSKPTILVKVSMDGAPYLRKIDLNLYKCYNELLNALEDMFNFKIGKETGNKDGTE 64
Query: 578 WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDV 615
+E Y D +GD MLVGD PW F KR+ I ++
Sbjct: 65 YETTYEDKDGDWMLVGDVPWEMFTTSCKRLRIIKGSEL 102
>gi|20269063|emb|CAC84712.1| aux/IAA protein [Populus tremula x Populus tremuloides]
Length = 204
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 50/110 (45%), Gaps = 13/110 (11%)
Query: 523 KQSCLTSNRSRT-------KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK-GQLHT 574
+++CL + + KV M G R +DL GY L+ LEEMF K G+
Sbjct: 92 RKNCLQAKKQEAEAAGLYVKVSMDGAPYLRKIDLKVYKGYPELLKALEEMFKSKVGEYSE 151
Query: 575 RTKWEI-----VYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 619
R + Y D +GD MLVGD PW F N KR+ I + + +
Sbjct: 152 REGYNGSEHVPTYEDKDGDWMLVGDVPWDMFINSCKRLRIMKESEARGLG 201
>gi|449466107|ref|XP_004150768.1| PREDICTED: auxin-responsive protein IAA26-like [Cucumis sativus]
gi|449490048|ref|XP_004158493.1| PREDICTED: auxin-responsive protein IAA26-like [Cucumis sativus]
Length = 326
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 52/111 (46%), Gaps = 23/111 (20%)
Query: 534 TKVQMQGVAVGRALDLTTLVGYDHL---IDEL--------------------EEMFDIKG 570
K+ M GV +GR +DL Y+ L +DEL EE I G
Sbjct: 202 VKINMDGVPIGRKIDLNAYDSYEKLSFGVDELFRGLLAAQRDSSGGGVLNKQEEEKPITG 261
Query: 571 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPG 621
L ++ +VY D+EGD +LVGD PW F + KR+ + S ++ +S G
Sbjct: 262 LLDGSGEYTLVYEDNEGDRVLVGDVPWQMFVSTAKRLRVLKSSELPSLSLG 312
>gi|297742476|emb|CBI34625.3| unnamed protein product [Vitis vinifera]
Length = 380
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 60/117 (51%), Gaps = 3/117 (2%)
Query: 74 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 133
H F KV+T SD + ++HA + P LD + + L +D G WRF++ +
Sbjct: 155 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSANEKGLLLNFEDRSGKPWRFRYSYW 213
Query: 134 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLR--GENGELHVGVRCLARQQSSMPSSV 188
+ +++T GWS FV K+L AGD F R GE+G+ + + R + PSS+
Sbjct: 214 NSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGVGESGKDRLYIDWRRRPDAPEPSSL 270
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.129 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,174,436,371
Number of Sequences: 23463169
Number of extensions: 436100638
Number of successful extensions: 1377517
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1430
Number of HSP's successfully gapped in prelim test: 938
Number of HSP's that attempted gapping in prelim test: 1371021
Number of HSP's gapped (non-prelim): 3443
length of query: 643
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 494
effective length of database: 8,863,183,186
effective search space: 4378412493884
effective search space used: 4378412493884
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 80 (35.4 bits)