Query 006472
Match_columns 643
No_of_seqs 442 out of 2285
Neff 7.0
Searched_HMMs 29240
Date Tue Mar 26 01:59:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006472.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006472hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rtx_A MRNA-capping enzyme; gu 100.0 7.3E-67 2.5E-71 553.4 18.1 293 305-617 38-341 (343)
2 3kyh_C MRNA-capping enzyme sub 100.0 5.8E-66 2E-70 559.9 24.6 307 305-618 37-407 (461)
3 1p16_A GTP--RNA, mRNA capping 100.0 1E-57 3.4E-62 495.5 26.6 308 305-621 34-381 (395)
4 1ckm_A MRNA capping enzyme; nu 100.0 3.5E-54 1.2E-58 456.5 24.1 273 305-615 50-328 (330)
5 2c46_A MRNA capping enzyme; ph 100.0 6.8E-37 2.3E-41 310.8 20.6 195 81-278 23-217 (241)
6 1yn9_A BVP, polynucleotide 5'- 100.0 9.2E-33 3.1E-37 265.2 18.6 166 84-256 1-168 (169)
7 2cfm_A Thermostable DNA ligase 99.9 6.9E-25 2.4E-29 247.5 15.4 167 331-524 243-432 (561)
8 2hiv_A Thermostable DNA ligase 99.9 2E-23 6.9E-28 237.9 19.6 168 331-524 274-470 (621)
9 1vs0_A Putative DNA ligase-lik 99.9 1.1E-23 3.7E-28 221.5 14.0 163 328-524 23-197 (310)
10 3gde_A DNA ligase; DNA-binding 99.9 2.6E-22 8.8E-27 225.8 16.7 164 330-524 245-432 (558)
11 1fvi_A Chlorella virus DNA lig 99.9 3E-22 1E-26 209.2 13.6 158 329-524 18-196 (297)
12 1x9n_A DNA ligase I; 5'-adenyl 99.9 4E-22 1.4E-26 229.0 15.5 177 325-524 325-530 (688)
13 3l2p_A DNA ligase 3; DNA ligas 99.9 2.6E-20 8.8E-25 210.2 23.8 165 330-524 247-440 (579)
14 1a0i_A DNA ligase; DNA replica 99.8 6.3E-21 2.1E-25 203.7 13.2 187 315-525 9-249 (348)
15 3rgo_A Protein-tyrosine phosph 99.8 6.1E-20 2.1E-24 172.8 16.0 122 139-264 27-152 (157)
16 2oud_A Dual specificity protei 99.8 2.5E-20 8.4E-25 180.2 13.4 132 139-277 32-163 (177)
17 3s4o_A Protein tyrosine phosph 99.8 5.6E-20 1.9E-24 174.5 15.1 139 102-258 23-165 (167)
18 3emu_A Leucine rich repeat and 99.8 4.6E-20 1.6E-24 175.6 13.9 117 139-264 34-150 (161)
19 3s4e_A Dual specificity protei 99.8 2.7E-20 9.2E-25 173.6 11.0 114 139-261 28-141 (144)
20 3ezz_A Dual specificity protei 99.8 2.8E-20 9.5E-25 173.3 11.0 115 139-262 28-142 (144)
21 1ohe_A CDC14B, CDC14B2 phospha 99.8 1.3E-19 4.4E-24 193.1 17.3 147 100-261 182-331 (348)
22 1rxd_A Protein tyrosine phosph 99.8 2.2E-19 7.6E-24 169.0 16.4 153 90-263 2-156 (159)
23 3rz2_A Protein tyrosine phosph 99.8 1.9E-19 6.6E-24 175.7 16.3 144 100-264 35-178 (189)
24 2nt2_A Protein phosphatase sli 99.8 5.8E-20 2E-24 171.4 11.6 116 139-263 28-143 (145)
25 2hxp_A Dual specificity protei 99.8 1E-19 3.6E-24 172.0 13.5 118 139-264 30-148 (155)
26 1zzw_A Dual specificity protei 99.8 1.2E-19 4.2E-24 169.8 13.3 119 139-264 28-146 (149)
27 4erc_A Dual specificity protei 99.8 6.6E-19 2.3E-23 164.4 16.2 116 139-262 34-149 (150)
28 3f81_A Dual specificity protei 99.8 1.5E-19 5.1E-24 175.1 12.2 121 139-264 52-177 (183)
29 2j16_A SDP-1, tyrosine-protein 99.8 1.4E-19 4.6E-24 175.9 11.5 116 139-263 64-179 (182)
30 2e0t_A Dual specificity phosph 99.8 1.6E-19 5.5E-24 169.3 11.6 120 139-263 26-146 (151)
31 2hcm_A Dual specificity protei 99.8 3.4E-19 1.1E-23 169.8 12.5 117 139-264 36-152 (164)
32 2img_A Dual specificity protei 99.8 2.1E-18 7E-23 160.9 17.1 116 139-262 35-150 (151)
33 2g6z_A Dual specificity protei 99.8 3.9E-19 1.3E-23 176.6 12.3 118 139-265 30-147 (211)
34 2esb_A Dual specificity protei 99.8 6.6E-19 2.3E-23 171.9 12.0 117 139-264 44-160 (188)
35 2r0b_A Serine/threonine/tyrosi 99.8 6.5E-19 2.2E-23 165.7 11.2 119 139-262 32-151 (154)
36 1wrm_A Dual specificity phosph 99.8 1E-18 3.5E-23 166.8 11.8 115 139-263 31-145 (165)
37 3v0d_A Voltage-sensor containi 99.8 2.9E-18 9.9E-23 181.5 16.4 151 100-262 30-189 (339)
38 3n0a_A Tyrosine-protein phosph 99.8 3.8E-18 1.3E-22 181.7 16.3 152 100-264 27-179 (361)
39 2y96_A Dual specificity phosph 99.8 1.1E-18 3.9E-23 174.4 10.9 121 139-264 78-201 (219)
40 1yz4_A DUSP15, dual specificit 99.8 1.9E-18 6.4E-23 163.9 11.7 114 139-262 32-145 (160)
41 2wgp_A Dual specificity protei 99.8 3.7E-18 1.3E-22 166.9 13.0 117 139-264 50-166 (190)
42 3cm3_A Late protein H1, dual s 99.8 1.6E-18 5.3E-23 167.3 10.0 114 139-261 53-173 (176)
43 2pq5_A Dual specificity protei 99.8 2.5E-18 8.4E-23 170.2 11.6 121 139-264 70-193 (205)
44 1d5r_A Phosphoinositide phosph 99.7 2.5E-17 8.5E-22 174.1 17.3 153 100-264 22-178 (324)
45 1fpz_A Cyclin-dependent kinase 99.7 2.5E-17 8.7E-22 163.5 13.6 129 129-264 62-198 (212)
46 2q05_A Late protein H1, dual s 99.7 8.8E-17 3E-21 157.8 14.8 117 138-263 69-192 (195)
47 2i6j_A Ssoptp, sulfolobus solf 99.7 4.5E-17 1.5E-21 153.8 9.7 117 139-263 27-151 (161)
48 3vnn_A DNA ligase 4; non-homol 99.7 2E-16 6.8E-21 146.9 13.4 102 332-436 1-127 (139)
49 3nme_A Ptpkis1 protein, SEX4 g 99.6 1.1E-15 3.6E-20 159.4 13.5 118 139-261 38-166 (294)
50 1xri_A AT1G05000; structural g 99.6 2.1E-15 7E-20 141.2 5.2 100 139-245 32-135 (151)
51 2f46_A Hypothetical protein; s 99.2 6.1E-11 2.1E-15 111.8 10.9 93 139-242 41-141 (156)
52 3mmj_A MYO-inositol hexaphosph 99.1 1.7E-10 5.9E-15 119.7 11.7 82 157-244 175-257 (314)
53 1fpr_A Protein-tyrosine phosph 99.1 3.4E-10 1.2E-14 117.2 12.7 141 102-257 77-268 (284)
54 1p15_A Protein-tyrosine phosph 99.1 3.1E-10 1.1E-14 115.6 10.5 144 102-261 52-241 (253)
55 2hc1_A Receptor-type tyrosine- 99.1 1.1E-09 3.6E-14 113.9 14.1 94 164-258 181-280 (291)
56 3b7o_A Tyrosine-protein phosph 99.0 1.3E-09 4.3E-14 114.6 13.7 89 169-258 208-304 (316)
57 1jln_A STEP-like ptpase, prote 99.0 2E-09 6.8E-14 112.2 14.4 141 103-258 102-284 (297)
58 2b49_A Protein tyrosine phosph 99.0 2.6E-09 8.7E-14 110.8 14.3 85 170-258 182-271 (287)
59 2cjz_A Human protein tyrosine 99.0 2.3E-09 7.8E-14 112.1 13.3 141 103-257 110-292 (305)
60 4grz_A Tyrosine-protein phosph 99.0 5.5E-09 1.9E-13 108.3 15.7 141 102-257 79-270 (288)
61 2ooq_A Receptor-type tyrosine- 99.0 2.7E-09 9.2E-14 110.6 13.1 140 102-258 90-274 (286)
62 2cm2_A Tyrosine-protein phosph 99.0 4.2E-09 1.4E-13 110.1 14.5 87 171-258 185-279 (304)
63 2gjt_A Receptor-type tyrosine- 99.0 4.3E-09 1.5E-13 109.5 14.3 137 103-257 93-277 (295)
64 3f41_A Phytase; tandem repeat, 99.0 1.8E-09 6.2E-14 120.9 12.0 80 157-242 492-572 (629)
65 3gxh_A Putative phosphatase (D 99.0 3.2E-09 1.1E-13 100.1 11.9 115 131-259 33-151 (157)
66 1zc0_A Tyrosine-protein phosph 99.0 3.6E-09 1.2E-13 110.8 12.7 140 103-257 113-294 (309)
67 2i75_A Tyrosine-protein phosph 98.9 8.7E-09 3E-13 108.4 15.3 140 103-259 114-300 (320)
68 2bzl_A Tyrosine-protein phosph 98.9 1.1E-08 3.9E-13 107.7 16.0 88 171-258 215-314 (325)
69 2p6x_A Tyrosine-protein phosph 98.9 7E-09 2.4E-13 108.6 14.2 139 103-258 98-285 (309)
70 1wch_A Protein tyrosine phosph 98.9 7.4E-09 2.5E-13 108.7 14.0 84 170-258 213-301 (315)
71 3f41_A Phytase; tandem repeat, 98.9 4.3E-09 1.5E-13 117.9 11.8 81 157-243 194-276 (629)
72 3qwu_A DNA ligase; structural 98.9 7.5E-09 2.6E-13 109.3 12.9 162 309-498 52-222 (370)
73 1yfo_A D1, receptor protein ty 98.9 1.2E-08 4E-13 106.6 13.8 139 103-258 99-287 (302)
74 3i36_A Vascular protein tyrosi 98.9 1.7E-08 5.7E-13 107.2 14.8 143 102-259 112-300 (342)
75 1g4w_R Protein tyrosine phosph 98.9 4.7E-09 1.6E-13 113.1 9.8 100 163-262 270-377 (383)
76 2i1y_A Receptor-type tyrosine- 98.8 1.7E-08 5.7E-13 105.3 12.8 85 171-258 197-287 (301)
77 2h4v_A Receptor-type tyrosine- 98.8 2.7E-08 9.1E-13 104.7 14.3 86 170-258 218-308 (320)
78 2jjd_A Receptor-type tyrosine- 98.8 3.5E-08 1.2E-12 112.3 13.6 89 170-260 489-582 (599)
79 3s3e_A Tyrosine-protein phosph 98.8 5.9E-08 2E-12 101.5 14.2 142 102-260 113-299 (307)
80 2oc3_A Tyrosine-protein phosph 98.8 2.8E-08 9.5E-13 103.8 11.4 85 171-258 199-291 (303)
81 2b3o_A Tyrosine-protein phosph 98.7 6E-08 2.1E-12 108.9 14.6 86 171-257 417-510 (532)
82 1lar_A Protein (LAR); tyrosine 98.7 7.2E-08 2.4E-12 109.3 14.7 141 103-258 376-562 (575)
83 4az1_A Tyrosine specific prote 98.7 2.9E-08 9.9E-13 103.6 10.2 83 171-258 194-283 (302)
84 1xk5_A Snurportin-1; protein-R 98.7 4.3E-07 1.5E-11 88.4 17.4 161 330-514 21-183 (204)
85 1l8k_A T-cell protein-tyrosine 98.7 5.6E-08 1.9E-12 102.0 11.5 88 171-259 180-272 (314)
86 2shp_A SHP-2, SYP, SHPTP-2; ty 98.7 1.1E-07 3.8E-12 106.5 14.1 87 171-258 423-517 (525)
87 3m4u_A Tyrosine specific prote 98.7 6.5E-08 2.2E-12 101.1 10.7 86 171-261 197-289 (306)
88 2vug_A PAB1020; RNA, ligase, A 98.7 3.6E-07 1.2E-11 98.2 16.3 161 309-498 73-242 (389)
89 3ps5_A Tyrosine-protein phosph 98.7 1.6E-07 5.6E-12 106.8 14.5 87 171-258 417-511 (595)
90 1ygr_A CD45 protein tyrosine p 98.6 1.1E-07 3.7E-12 108.6 12.9 145 103-261 408-604 (610)
91 1lar_A Protein (LAR); tyrosine 98.6 3E-07 1E-11 104.2 15.7 139 103-258 87-271 (575)
92 2jjd_A Receptor-type tyrosine- 98.6 2.8E-07 9.7E-12 104.9 14.5 85 171-258 196-285 (599)
93 1ywf_A Phosphotyrosine protein 98.6 7.1E-08 2.4E-12 100.4 8.2 112 125-242 56-213 (296)
94 3gjx_B Snurportin-1; transport 98.6 1.3E-06 4.4E-11 90.8 16.8 161 330-514 122-284 (365)
95 1ygr_A CD45 protein tyrosine p 98.6 2.2E-07 7.6E-12 106.0 12.0 140 102-258 97-285 (610)
96 4i8n_A Tyrosine-protein phosph 98.5 3.9E-07 1.3E-11 97.1 11.2 87 171-258 213-307 (354)
97 1lyv_A Protein-tyrosine phosph 98.4 8E-07 2.8E-11 92.8 11.3 62 201-262 234-299 (306)
98 4ge6_A Tyrosine-protein phosph 98.4 9.9E-07 3.4E-11 92.4 11.6 141 103-257 96-294 (314)
99 2nlk_A Protein tyrosine phosph 98.4 1.4E-06 4.7E-11 99.8 13.3 86 170-258 200-290 (627)
100 2nlk_A Protein tyrosine phosph 98.1 6.9E-06 2.3E-10 93.9 9.4 87 171-262 494-585 (627)
101 1ohe_A CDC14B, CDC14B2 phospha 96.7 0.0036 1.2E-07 66.2 9.0 69 172-242 49-121 (348)
102 1s68_A RNA ligase 2; ribonucle 96.5 0.013 4.5E-07 59.0 11.0 109 326-434 24-145 (249)
103 2hvq_A ORF1, hypothetical 37.6 96.4 0.02 6.8E-07 60.2 11.9 110 326-435 25-147 (335)
104 1ta8_A DNA ligase, NAD-depende 95.1 0.22 7.4E-06 52.0 13.2 158 331-515 114-317 (332)
105 1b04_A Protein (DNA ligase); D 94.3 0.25 8.5E-06 51.3 11.4 159 331-516 108-312 (318)
106 4glw_A DNA ligase; inhibitor, 93.2 1.5 5.1E-05 45.2 14.8 157 328-515 100-304 (305)
107 4glx_A DNA ligase; inhibitor, 92.5 2.9 0.0001 46.9 17.0 161 330-518 108-319 (586)
108 3jsl_A DNA ligase; NAD+-depend 91.9 2.2 7.4E-05 44.2 13.9 157 330-515 105-309 (318)
109 3uq8_A DNA ligase; adenylated 89.8 3.8 0.00013 42.5 13.5 158 331-516 108-316 (322)
110 1xdn_A RNA editing ligase MP52 87.7 2.9 0.0001 42.1 10.5 107 326-433 29-189 (277)
111 1zau_A DNA ligase; AMP; HET: D 84.1 0.51 1.7E-05 49.2 3.0 146 330-501 116-306 (328)
112 1vee_A Proline-rich protein fa 83.3 2 6.8E-05 38.2 6.3 85 125-229 7-99 (134)
113 2owo_A DNA ligase; protein-DNA 82.0 19 0.00065 41.0 15.1 159 331-518 109-319 (671)
114 1dgs_A DNA ligase; AMP complex 74.9 48 0.0016 37.7 15.5 160 331-518 110-317 (667)
115 3sgi_A DNA ligase; HET: DNA AM 70.9 7.6 0.00026 43.7 7.6 161 331-517 117-328 (615)
116 2c5u_A RNA ligase, T4 RNA liga 62.6 14 0.00046 39.1 7.3 101 329-432 92-201 (375)
117 2yf0_A Myotubularin-related pr 55.8 13 0.00044 40.9 5.8 26 199-224 327-352 (512)
118 1zsq_A Myotubularin-related pr 52.5 18 0.00061 40.0 6.3 25 200-224 340-364 (528)
119 3iwh_A Rhodanese-like domain p 51.1 14 0.00047 31.3 4.1 29 199-230 54-82 (103)
120 1lw3_A Myotubularin-related pr 46.9 24 0.00083 39.9 6.3 25 200-224 412-436 (657)
121 3hzu_A Thiosulfate sulfurtrans 45.2 44 0.0015 34.0 7.6 90 126-230 43-138 (318)
122 2hhg_A Hypothetical protein RP 44.2 15 0.00052 32.2 3.4 28 199-229 84-111 (139)
123 3foj_A Uncharacterized protein 43.4 17 0.00059 30.0 3.5 28 199-229 54-81 (100)
124 2fsx_A RV0390, COG0607: rhodan 40.8 21 0.00072 31.9 3.8 28 199-229 78-105 (148)
125 3gk5_A Uncharacterized rhodane 39.6 20 0.00068 30.2 3.3 28 199-229 53-80 (108)
126 1qxn_A SUD, sulfide dehydrogen 38.9 22 0.00075 31.4 3.6 28 199-229 80-107 (137)
127 3eme_A Rhodanese-like domain p 38.6 28 0.00097 28.8 4.1 28 199-229 54-81 (103)
128 4f67_A UPF0176 protein LPG2838 37.3 37 0.0013 34.0 5.3 85 123-229 122-206 (265)
129 3flh_A Uncharacterized protein 37.2 27 0.00091 30.2 3.8 81 125-229 17-98 (124)
130 3f4a_A Uncharacterized protein 36.5 1.6E+02 0.0055 26.8 9.3 23 201-224 104-126 (169)
131 2jtq_A Phage shock protein E; 33.6 82 0.0028 24.7 6.0 29 199-230 39-67 (85)
132 3ilm_A ALR3790 protein; rhodan 30.5 45 0.0015 29.6 4.2 80 126-230 3-82 (141)
133 1e0c_A Rhodanese, sulfurtransf 30.0 42 0.0014 32.9 4.3 30 198-230 220-249 (271)
134 1gmx_A GLPE protein; transfera 29.1 87 0.003 25.9 5.7 76 126-229 8-83 (108)
135 1uas_A Alpha-galactosidase; TI 27.5 67 0.0023 33.3 5.6 82 126-214 75-168 (362)
136 3hix_A ALR3790 protein; rhodan 27.4 55 0.0019 27.2 4.0 29 199-230 50-78 (106)
137 1e0c_A Rhodanese, sulfurtransf 26.9 88 0.003 30.5 6.1 46 177-230 63-108 (271)
138 2k0z_A Uncharacterized protein 26.3 65 0.0022 26.9 4.3 28 199-229 54-81 (110)
139 3g5j_A Putative ATP/GTP bindin 22.9 1E+02 0.0036 26.0 5.1 27 200-229 87-115 (134)
140 2gwf_A Ubiquitin carboxyl-term 22.0 1.7E+02 0.0057 26.2 6.5 81 125-213 22-104 (157)
141 3i2v_A Adenylyltransferase and 21.9 61 0.0021 27.4 3.4 23 202-226 73-95 (127)
142 3olh_A MST, 3-mercaptopyruvate 21.5 1E+02 0.0034 31.0 5.4 40 188-230 240-280 (302)
143 3d1p_A Putative thiosulfate su 21.4 88 0.003 27.1 4.4 89 125-230 25-117 (139)
144 1uar_A Rhodanese; sulfurtransf 21.1 76 0.0026 31.2 4.3 28 199-229 231-259 (285)
145 1urh_A 3-mercaptopyruvate sulf 20.4 1.3E+02 0.0045 29.4 5.9 45 177-229 68-112 (280)
146 3aay_A Putative thiosulfate su 20.1 1E+02 0.0036 30.0 5.1 29 199-229 75-103 (277)
No 1
>3rtx_A MRNA-capping enzyme; guanylyltransferase, RNA polymerase II CTD, lysyl-N-GMP, NUC mRNA capping, transferase; HET: SEP GUN; 2.81A {Mus musculus} PDB: 3s24_A
Probab=100.00 E-value=7.3e-67 Score=553.43 Aligned_cols=293 Identities=40% Similarity=0.665 Sum_probs=195.7
Q ss_pred CCCCCCCCCCcccccchhhhhhhcccceeeeecCceeEEEEEEE-CCEEEEEeCCCccccc-cCCCCCcCCcccccccCC
Q 006472 305 GRGNMQFPGSHPVSLNSDNLQLLRQRYYYATWKADGTRYMMLIT-IDGCYLIDRCFNFRRV-QMRFPCRNSNEGLGEKTH 382 (643)
Q Consensus 305 ~~~~~~FPGsqPVslsr~~l~~l~~~~Y~V~eK~DG~R~ll~i~-~~~vyLidR~~~~~~v-~~~FP~~~~~~~~~~~~~ 382 (643)
+|+..+|||||||||+|+||+.|.+++|+||||+||+|+||++. ++++||+||++.++.+ +.+||...... ..+
T Consensus 38 ~~~~~~FPGsqPVS~~r~nl~~L~~~~y~v~~K~DG~R~ll~i~~~~~v~L~sR~~~~~~~~~~~FP~~~~~~----~~~ 113 (343)
T 3rtx_A 38 GWEGSGFPGAQPVSMDKQNIRLLEQKPYKVSWKADGTRYMMLIDGTNEVFMIDRDNSVFHVSNLEFPFRKDLR----MHL 113 (343)
T ss_dssp TCCSSSCCSEEEEECCTTGGGHHHHSCEEEEEECCCEEEEEEECSTTCEEEECTTCCEEEETTCCCEETTEEE----EEC
T ss_pred CCCCCCCCCceeeccchhhHHhhccCCEEEEECCCceEEEEEEEcCCEEEEEeCCCCeEEeccccCCcchhhh----ccC
Confidence 88999999999999999999999999999999999999999999 7899999999987655 58999775421 236
Q ss_pred CCeEeeEEEEEecCCCCCCcceEEEEeEeeecCCeeccCCCHHHHHHHHHHHhcCccccccccccccCCCCccCCCCCcE
Q 006472 383 HFTLLDGEMIIDKLPDSRRQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLEPFR 462 (643)
Q Consensus 383 ~~tlLDGElV~d~~~~~~~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~v~~p~~~~~~~~~~~~~p~~~~~~~pf~ 462 (643)
.+||||||||+++..+. ..++|++||+|+++|++++++||.+|+++|++.++.|+...++ ++.+....+||.
T Consensus 114 ~~tvLDGElV~~~~~g~--~~~~~~~FDlL~~~G~dl~~~pl~eR~~~L~~~i~~p~~~~~~------~~~~~~~~~pf~ 185 (343)
T 3rtx_A 114 SNTLLDGEMIIDKVNGQ--AVPRYLIYDIIKFNAQPVGDCDFNIRLQCIEREIISPRHEKMK------TGLIDKTQEPFS 185 (343)
T ss_dssp CSEEEEEEEEEEESSSS--EEEEEEEEEEEEBTTBCGGGSCHHHHHHHHHHHTHHHHHHHHH------HSSCCTTTSSSE
T ss_pred CCeEEEEEEEEecCCCc--EeeEEEEEEEEeECCcCcccCCHHHHHHHHHHHhhhHHHHHhh------cccccccCCCcE
Confidence 88999999999865332 4689999999999999999999999999999999988764431 122345678999
Q ss_pred EEecceeechhHHHHH-HHhcccccCCCceEEEEeCCCCCccCCCCCeEEEecCCCceEEEEEEEecCC-c-------ee
Q 006472 463 VRRKDFWLLSTVNKLL-KEFIPKLSHDADGLVFQGWDDPYVPRTHEGLLKWKYARMNSVDFLFEVTDDD-R-------QL 533 (643)
Q Consensus 463 I~~K~~~~~~~~~~ll-~~~~~~l~h~~DGLIf~p~~spY~~G~~~~llKWKP~~~nTvDF~l~~~~~~-~-------~~ 533 (643)
|+.|+|++++++.++| .+|++++.|++|||||||.+ ||.+|++..||||||+++|||||+|++.... . +.
T Consensus 186 vr~K~~~~~~~~~~ll~~~~~~~l~~~~dGlIf~~~~-~Y~~G~~~~~lKwKp~~~~tvDF~l~~~~~~~~g~~~~~~~~ 264 (343)
T 3rtx_A 186 VRPKQFFDINISRKLLEGNFAKEVSHEMDGLIFQPIG-KYKPGRCDDILKWKPPSLNSVDFRLKITRMGGEGLLPQNVGL 264 (343)
T ss_dssp EEECCCEEGGGHHHHSCC----------CEEEEEESS-CCCCEEEEEEEEECCSTTCC----------------------
T ss_pred EEEEEeEehhhHHHHHhhhhHhhcCCCCCeEEEEECc-cCcCCCCcceEEEecCcceEEEEEEEecccCCCCccccccce
Confidence 9999999999999998 46889999999999999999 9999999999999999999999999886431 1 13
Q ss_pred EEEEeCCeeeeecCceeEecCCCCCCCCceEEEEEEeCCCCeeEEEEEecCCCCCChHHHHHHHHHhcccCCCHHHHHHH
Q 006472 534 LYVFERGKKKLMEGSSVEFTDREPSFYSGKIIECTWDPDVQLWKCMRIRTDKSTPNDINTYRKVMRSIRDNITEEVLLNE 613 (643)
Q Consensus 534 L~~~~~g~~~~~~~~~~~f~~~~~~~~dg~IvEc~~d~~~~~W~~~R~R~DK~~pN~~~tv~~v~~SI~~~It~e~Ll~~ 613 (643)
||+ +|...+++. +..+ +++.++||+||||+|| +|+|+|||+|+||++||+++||.+||+||.++||+|+|+++
T Consensus 265 l~~--~g~~~~f~~--~~~t-~~l~~ld~~IvEC~~~--~~~W~~~R~R~DK~~pN~~~tv~~v~~SI~d~Vt~e~L~~~ 337 (343)
T 3rtx_A 265 LYV--GGYERPFAQ--IKVT-KELKQYDNKIIECKFE--NNSWVFMRQRIDKSFPNAYNTAMAVCNSISNPVTKEMLFEF 337 (343)
T ss_dssp --------------------------------------------------------CHHHHHHHHHHHHSCCCHHHHHHH
T ss_pred EEE--CCeeeecce--eecc-ccchhcCCEEEEEEEE--CCEEEEEEEcCCCCCCchHHHHHHHHHHHHccCCHHHHHHH
Confidence 333 344333332 2121 4567899999999998 68999999999999999999999999999999999999999
Q ss_pred HHHH
Q 006472 614 IQEI 617 (643)
Q Consensus 614 i~~i 617 (643)
|++.
T Consensus 338 i~~~ 341 (343)
T 3rtx_A 338 IDRC 341 (343)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 9864
No 2
>3kyh_C MRNA-capping enzyme subunit alpha; 5' modification, triphosphatase, guanylyltransferase, complex, hydrolase, mRNA processing, nucleus; 3.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.8e-66 Score=559.87 Aligned_cols=307 Identities=34% Similarity=0.532 Sum_probs=253.7
Q ss_pred CCCCC--CCCCCcccccchhhh-hhhcccceeeeecCceeEEEEEEEC------CEEEEEeCCCcccccc-CCCCCcCCc
Q 006472 305 GRGNM--QFPGSHPVSLNSDNL-QLLRQRYYYATWKADGTRYMMLITI------DGCYLIDRCFNFRRVQ-MRFPCRNSN 374 (643)
Q Consensus 305 ~~~~~--~FPGsqPVslsr~~l-~~l~~~~Y~V~eK~DG~R~ll~i~~------~~vyLidR~~~~~~v~-~~FP~~~~~ 374 (643)
+|.+. +|||||||||+|+|| ..|..++|+||||+||+||||++.. ++|||+||+++++.++ ++||.....
T Consensus 37 ~~~~~~~~FPGsqPVS~~r~nl~~~L~~~dY~V~eK~DGiR~Ll~i~~~~~~g~g~v~LidR~~~~~~v~~~~FP~~~~~ 116 (461)
T 3kyh_C 37 NSPKPTKTFPGSQPVSFQHSDVEEKLLAHDYYVCEKTDGLRVLMFIVINPVTGEQGCFMIDRENNYYLVNGFRFPRLPQK 116 (461)
T ss_dssp TSCGGGSSCSSCEEEECCHHHHHHTTSSSCEEEEEEECSEEEEEEEEECTTTCCEEEEEECSSSCEEEECCCCCCCCSSC
T ss_pred CCCCCCCcCCCCcceeecHhhHHHHhccCCEEEEEcccceEEEEEEeccccCCCceEEEEeCCCCeEEcccccCCccccc
Confidence 67655 999999999999999 6799999999999999999999982 5799999999988765 899987542
Q ss_pred --ccccccCCCCeEeeEEEEEecCCCCCCcceEEEEeEeeecCCeeccCCCHHHHHHHHHHHhcCccccccccccccCCC
Q 006472 375 --EGLGEKTHHFTLLDGEMIIDKLPDSRRQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNP 452 (643)
Q Consensus 375 --~~~~~~~~~~tlLDGElV~d~~~~~~~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~v~~p~~~~~~~~~~~~~p 452 (643)
+++....+.+||||||||+++.+.++..+++|+|||||+++|++++++||.+|+++|++.|+.|+...++ .+|
T Consensus 117 ~~~~~l~~~~~~TlLDGElV~d~~~~~~~~~~~y~~FDlL~~~G~dl~~~pl~eR~~~Le~~I~~P~~~~~~-----~~p 191 (461)
T 3kyh_C 117 KKEELLETLQDGTLLDGELVIQTNPMTKLQELRYLMFDCLAINGRCLTQSPTSSRLAHLGKEFFKPYFDLRA-----AYP 191 (461)
T ss_dssp CSSGGGTCCCCSEEEEEEEEEEECTTTCCEEEEEEEEEEEEETTEECSSSBHHHHHHHHHHTTHHHHHHHHH-----HCS
T ss_pred chhhhhhccCCCeEEEEEEEeccCCCCCccceEEEEEEEEeECCcCcccCCHHHHHHHHHHHhcccchhhhh-----ccc
Confidence 1222345789999999999875533336899999999999999999999999999999998877644331 123
Q ss_pred CccCCCCCcEEEecceeechhHHHHHHHhcccccCCCceEEEEeCCCCCcc-CCCCCeEEEecCCCceEEEEEEEecC--
Q 006472 453 YYRYDLEPFRVRRKDFWLLSTVNKLLKEFIPKLSHDADGLVFQGWDDPYVP-RTHEGLLKWKYARMNSVDFLFEVTDD-- 529 (643)
Q Consensus 453 ~~~~~~~pf~I~~K~~~~~~~~~~ll~~~~~~l~h~~DGLIf~p~~spY~~-G~~~~llKWKP~~~nTvDF~l~~~~~-- 529 (643)
+....+||.|+.|+|+.++.+.++|+ +++++.|++||||||+.++||.+ ||+..||||||+++|||||+|++...
T Consensus 192 -~~~~~~pF~V~~K~~~~~~~~~~l~~-~~~~l~~~~EGLv~k~~~spY~~Ggr~~~~lKwKp~~~nTVDF~L~i~~~~~ 269 (461)
T 3kyh_C 192 -NRCTTFPFKISMKHMDFSYQLVKVAK-SLDKLPHLSDGLIFTPVKAPYTAGGKDSLLLKWKPEQENTVDFKLILDIPMV 269 (461)
T ss_dssp -TTCSCCCSEEEECCCEEGGGHHHHHH-HHTTCSSCEEEEEEEESSSBCCSSSEEEEEEECCCTTTCCCEEEEECCCC--
T ss_pred -cccccCCcEEEeccchhhhhHHHHHH-hhhhccCCCCeEEEEeCCCCCcCCCcCCCeEEEEcCCCeeEEEEEEeccccc
Confidence 23457899999999999999999998 67899999999999999999999 68999999999999999999987520
Q ss_pred --------------------CceeEEEEeCCee---------ee--------ecCceeEec-----CC-------CCCCC
Q 006472 530 --------------------DRQLLYVFERGKK---------KL--------MEGSSVEFT-----DR-------EPSFY 560 (643)
Q Consensus 530 --------------------~~~~L~~~~~g~~---------~~--------~~~~~~~f~-----~~-------~~~~~ 560 (643)
..+.|||+.+|.. .+ ++.....|. +. ...++
T Consensus 270 ~~~~~~~~~~~~~y~dy~~~p~~~L~v~~gg~~~~~~~~~~~~~f~~~~~~~l~~~~~~f~~l~~t~~ew~~lk~~~~~l 349 (461)
T 3kyh_C 270 EDPSLPKDDRNRWYYNYDVKPVFSLYVWQGGADVNSRLKHFDQPFDRKEFEILERTYRKFAELSVSDEEWQNLKNLEQPL 349 (461)
T ss_dssp ----------------CCSCCCCEEEEECTTCHHHHHHHHTTCSCTTTTHHHHTTTEEEEEECCCCTTTHHHHHHSCCCC
T ss_pred CCCcccccccccccccccccceeEEEEEeCCcccccccccccccccchhhhcccccceecceeeecHHHHHHHhhccCCC
Confidence 0357888877721 11 111122232 21 23569
Q ss_pred CceEEEEEEeCCCCeeEEEEEecCCCCCChHHHHHHHHHhcccCCCHHHHHHHHHHHh
Q 006472 561 SGKIIECTWDPDVQLWKCMRIRTDKSTPNDINTYRKVMRSIRDNITEEVLLNEIQEII 618 (643)
Q Consensus 561 dg~IvEc~~d~~~~~W~~~R~R~DK~~pN~~~tv~~v~~SI~~~It~e~Ll~~i~~i~ 618 (643)
||+||||+||+++|+|+|||+|+||++||+++||.+||+||.++||+|+|+..|++|.
T Consensus 350 d~~IvEC~~d~~~~~W~~~R~R~DK~~pN~~~tv~~vleSI~d~Vt~e~L~~~~~~i~ 407 (461)
T 3kyh_C 350 NGRIVECAKNQETGAWEMLRFRDDKLNGNHTSVVQKVLESINDSVSLEDLEEIVGDIK 407 (461)
T ss_dssp TTEEEEECCCTTTSSCCEEEECTTSSSCCCHHHHHHHHHHHHHCCCSHHHHTTTHHHH
T ss_pred CCEEEEEEEeCCCCeEEEEEECCCCCCCCchHHHHHHHHHHhccCCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999998776654
No 3
>1p16_A GTP--RNA, mRNA capping enzyme alpha subunit; guanylyltransferase, transcription, capping, CTD, mRNA; HET: SEP G GTP; 2.70A {Candida albicans} SCOP: b.40.4.6 d.142.2.3
Probab=100.00 E-value=1e-57 Score=495.47 Aligned_cols=308 Identities=31% Similarity=0.517 Sum_probs=248.4
Q ss_pred CCCCCCCCCCcccccchhhh-hhhcccceeeeecCceeEEEEEE-----ECCEEEEEeCCCcccccc-CCCCCcCCcccc
Q 006472 305 GRGNMQFPGSHPVSLNSDNL-QLLRQRYYYATWKADGTRYMMLI-----TIDGCYLIDRCFNFRRVQ-MRFPCRNSNEGL 377 (643)
Q Consensus 305 ~~~~~~FPGsqPVslsr~~l-~~l~~~~Y~V~eK~DG~R~ll~i-----~~~~vyLidR~~~~~~v~-~~FP~~~~~~~~ 377 (643)
++...+|||+|||||+++++ ..+...+|+||||+||+|+|+++ .++++||+||+++++.++ .+||.......-
T Consensus 34 ~~~~~~FPg~~Pvsl~~~~l~~~l~~~~~~ve~K~DG~R~ll~~~~~~~~g~~v~L~sR~~~~~~i~~~~FP~~~~~~~~ 113 (395)
T 1p16_A 34 GRRNTGFPGSQPVSFERRHLEETLMQKDYFVCEKTDGLRCLLFLINDPDKGEGVFLVTRENDYYFIPNIHFPLSVNETRE 113 (395)
T ss_dssp TCSCCSCCCEEEEECCHHHHHTHHHHSCEEEEEEECSEEEEEEEEEETTTEEEEEEEETTCCEEECCSCCCCSCTTCCSS
T ss_pred CCCCCCCCCCceecccHHHHHHhhCcCCEEEEECccceEEEEEEeecccCCCEEEEEeCCCceEEeccccCCcccccccc
Confidence 78889999999999999999 78888899999999999999999 346899999999976665 789986542100
Q ss_pred cccCCCCeEeeEEEEEecCCCCCCcceEEEEeEeeecCCeeccCCCHHHHHHHHHHHhcCccccccccccccCCC-CccC
Q 006472 378 GEKTHHFTLLDGEMIIDKLPDSRRQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNP-YYRY 456 (643)
Q Consensus 378 ~~~~~~~tlLDGElV~d~~~~~~~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~v~~p~~~~~~~~~~~~~p-~~~~ 456 (643)
....+.+|+||||||++..++. +.+++|+|||||+++|++++++||.+|+++|++.++.|+...++ .+| ....
T Consensus 114 ~~~~~~~~vLDGElV~~~~~~~-~~~~~f~~FDlL~~~G~dl~~~pl~eR~~~L~~~i~~~~~~~~~-----~~~~~~~~ 187 (395)
T 1p16_A 114 KPTYHHGTLLDGELVLENRNVS-EPVLRYVIFDALAIHGKCIIDRPLPKRLGYITENVMKPFDNFKK-----HNPDIVNS 187 (395)
T ss_dssp SCCCCSSEEEEEEEEEECCSSS-CCEEEEEEEEEEEETTEECTTSCHHHHHHHHHHHTHHHHHHHHH-----HCHHHHSC
T ss_pred hhccCCcceeeeEEEEeccCCC-cceeEEEEEEEEEECCeEcccCCHHHHHHHHHHHhhcccHhhhh-----cCcccccc
Confidence 0123678999999999875432 25789999999999999999999999999999988766432210 011 0123
Q ss_pred CCCCcEEEecceeechhHHHHHHHhcccccCCCceEEEEeCCCCCccCCCCCeEEEecCCCceEEEEEEEec--------
Q 006472 457 DLEPFRVRRKDFWLLSTVNKLLKEFIPKLSHDADGLVFQGWDDPYVPRTHEGLLKWKYARMNSVDFLFEVTD-------- 528 (643)
Q Consensus 457 ~~~pf~I~~K~~~~~~~~~~ll~~~~~~l~h~~DGLIf~p~~spY~~G~~~~llKWKP~~~nTvDF~l~~~~-------- 528 (643)
..+||.|+.+++++++++.++|+. ++.+.|++||||||+.++||.+|++..||||||++.|||||+|....
T Consensus 188 ~~~pf~v~~~~~~~~~~~~~~~~~-~~~~~~g~EGlI~K~~ds~Y~~Gr~~~wlKwK~~~~~TvDfvl~~~~~~~~~~~~ 266 (395)
T 1p16_A 188 PEFPFKVGFKTMLTSYHADDVLSK-MDKLFHASDGLIYTCAETPYVFGTDQTLLKWKPAEENTVDFQLEFVFNEVQDPDL 266 (395)
T ss_dssp TTSCCEEEECCCEEGGGTHHHHTT-GGGCSSCEEEEEEEESSSCCCSEEEEEEEEECCGGGCCEEEEEEEECEEEECTTS
T ss_pred ccCceEEEEecchhHHHHHHHHHH-HHhcCCCCCeEEEEeCCCCcCCCCccceEEEecCCCeEEEEEEEEEecccccccc
Confidence 467899999999999998888875 46789999999999999999999999999999999999999997531
Q ss_pred --CCc-------------eeEEEEeCCee-eeecCceeEecC-------CCCCCCCceEEEEEEe-CCCCeeEEEEEecC
Q 006472 529 --DDR-------------QLLYVFERGKK-KLMEGSSVEFTD-------REPSFYSGKIIECTWD-PDVQLWKCMRIRTD 584 (643)
Q Consensus 529 --~~~-------------~~L~~~~~g~~-~~~~~~~~~f~~-------~~~~~~dg~IvEc~~d-~~~~~W~~~R~R~D 584 (643)
.++ ..|+++.+|+. .+|. .+.|++ .....++|+||||.|+ +++|.|+|+|+|+|
T Consensus 267 ~g~G~~~~~~dy~~~p~~~~l~v~~~~~~~~~f~--~~~ltd~e~~~l~~~~~~~~~~IvEc~~~~~~~g~wr~~R~R~D 344 (395)
T 1p16_A 267 DERDPTSTYLDYDAKPNLIKLRVWQGSNVHTDFA--KLDLSDDDWERLKALEQPLQGRIAECRQSTTKKGYWEMLRFRND 344 (395)
T ss_dssp CTTSTTCEEEECSSCCSEEEEEEECSTTCEEEEE--EECCCHHHHHHHHHSSSCCTTCEEEEEECSSSTTEEEEEEECTT
T ss_pred cccCccccccccccccceeEEEEEeCCcccceee--EEEeCHHHHHHhHhhcccCCCEEEEEEeecCCCCccEEEEEeCC
Confidence 111 34667766533 2232 223332 1246789999999998 67899999999999
Q ss_pred CCCCChHHHHHHHHHhcccCCCHHHHHHHHHHHhcCc
Q 006472 585 KSTPNDINTYRKVMRSIRDNITEEVLLNEIQEIIRLP 621 (643)
Q Consensus 585 K~~pN~~~tv~~v~~SI~~~It~e~Ll~~i~~i~~~~ 621 (643)
|+.||+++||.+||+||.++||+|+|++++++|..-.
T Consensus 345 K~~pN~~~t~~~vl~si~~~vt~eeL~~~~~~~~~~w 381 (395)
T 1p16_A 345 KSNGNHISVVEKILVSIKDGVKEKEVIEWCPKISRAW 381 (395)
T ss_dssp CSSCCBHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHH
T ss_pred CCCcChHHHHHHHHHHHHccCCHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999864433
No 4
>1ckm_A MRNA capping enzyme; nucleotidyltransferase; HET: GTP; 2.50A {Paramecium bursaria chlorella virus 1} SCOP: b.40.4.6 d.142.2.3 PDB: 1ckn_A* 1cko_A* 1ckn_B*
Probab=100.00 E-value=3.5e-54 Score=456.50 Aligned_cols=273 Identities=24% Similarity=0.433 Sum_probs=228.5
Q ss_pred CCCCCCCCCCcccccchhhhhhhcccceeeeecCceeEEEEEEE---C-CEEEEEeCCCccccccCCCCCcCCccccccc
Q 006472 305 GRGNMQFPGSHPVSLNSDNLQLLRQRYYYATWKADGTRYMMLIT---I-DGCYLIDRCFNFRRVQMRFPCRNSNEGLGEK 380 (643)
Q Consensus 305 ~~~~~~FPGsqPVslsr~~l~~l~~~~Y~V~eK~DG~R~ll~i~---~-~~vyLidR~~~~~~v~~~FP~~~~~~~~~~~ 380 (643)
+|+..+|||+|||||++++++.|...+|+||||+||+|++|+++ + +++||+||+++.+ +..||.... .
T Consensus 50 ~~~~~~Fpg~~Pv~~~~~~~~~L~~~~y~ve~K~DG~R~ll~~~~~~g~g~v~L~sR~~~~~--t~~fp~~~~------~ 121 (330)
T 1ckm_A 50 DHKFPRLPGPNPVSIERKDFEKLKQNKYVVSEKTDGIRFMMFFTRVFGFKVCTIIDRAMTVY--LLPFKNIPR------V 121 (330)
T ss_dssp CCSSCCCSSEEEEECCGGGHHHHHHSCEEEEEEECSEEEEEEEEEETTEEEEEEECTTCCEE--ECCCSCCCT------T
T ss_pred CCCCCCCCCCceeCcchHHHhhCCcCCEEEEECcceEEEEEEEEecCCCCEEEEEeCCCCEE--eccChhhhh------c
Confidence 78999999999999999999999888999999999999999998 4 6799999999854 446775421 2
Q ss_pred CCCCeEeeEEEEEecCCCCCCcceEEEEeEeeecCCeeccCCCHHHHHHHHHHHhcCccccccccccccCCCCccCCCCC
Q 006472 381 THHFTLLDGEMIIDKLPDSRRQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLEP 460 (643)
Q Consensus 381 ~~~~tlLDGElV~d~~~~~~~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~v~~p~~~~~~~~~~~~~p~~~~~~~p 460 (643)
.+.+|+||||||++..+ ..++|++||||+++|++++++||.+|+++|++.+..+. .....|
T Consensus 122 ~~~~~vLDGElv~~~~~----~~~~f~vFDlL~~~G~dl~~~pl~eRr~~L~~~l~~~~---------------~~~~~~ 182 (330)
T 1ckm_A 122 LFQGSIFDGELCVDIVE----KKFAFVLFDAVVVSGVTVSQMDLASRFFAMKRSLKEFK---------------NVPEDP 182 (330)
T ss_dssp GGGCEEEEEEEEEETTT----TEEEEEEEEEEEETTEECTTSCHHHHHHHHHHHHTTCC---------------CCTTSS
T ss_pred cCCCeeEEEEEEEEcCC----CeEEEEEEeeeeeCCcccccCCHHHHHHHHHHHHhhhc---------------ccCCCC
Confidence 35799999999998642 24899999999999999999999999999999773211 012457
Q ss_pred cEEEecceeechhHHHHHHHhcccccC--CCceEEEEeCCCCCccCCCCCeEEEecCCCceEEEEEEEecCCceeEEEEe
Q 006472 461 FRVRRKDFWLLSTVNKLLKEFIPKLSH--DADGLVFQGWDDPYVPRTHEGLLKWKYARMNSVDFLFEVTDDDRQLLYVFE 538 (643)
Q Consensus 461 f~I~~K~~~~~~~~~~ll~~~~~~l~h--~~DGLIf~p~~spY~~G~~~~llKWKP~~~nTvDF~l~~~~~~~~~L~~~~ 538 (643)
|.|..++++++ .++++|+++.+.+.| ++||||||+.++||.+|++..||||||++.+|+||+|. .++++..|+++.
T Consensus 183 ~~i~~~~~~~~-~~~~~~~~~~~~~~~~yg~EGlI~K~~dspY~~Gr~~~~lKwK~~~~~tvDfvi~-~g~g~~gl~~~~ 260 (330)
T 1ckm_A 183 AILRYKEWIPL-EHPTIIKDHLKKANAIYHTDGLIIMSVDEPVIYGRNFNLFKLKPGTHHTIDFIIM-SEDGTIGIFDPN 260 (330)
T ss_dssp SEEEECCCEET-TCHHHHHHHHHHHHHHSCEEEEEEEESSSCCCCEEEEEEEEECSTTCCCEEEEEC-STTCCEEEEETT
T ss_pred eEEEEEEEEeh-hHHHHHHHHHHHHhccCCCceEEEeeCCCcccCCCccCeEEEEeCCCceEEEEEE-ccCCeEEEEeCC
Confidence 88999999999 888999877888999 99999999999999999999999999999999999996 333445555543
Q ss_pred CCeeeeecCceeEecCCCCCCCCceEEEEEEeCCCCeeEEEEEecCCCCCChHHHHHHHHHhcccCCCHHHHHHHHH
Q 006472 539 RGKKKLMEGSSVEFTDREPSFYSGKIIECTWDPDVQLWKCMRIRTDKSTPNDINTYRKVMRSIRDNITEEVLLNEIQ 615 (643)
Q Consensus 539 ~g~~~~~~~~~~~f~~~~~~~~dg~IvEc~~d~~~~~W~~~R~R~DK~~pN~~~tv~~v~~SI~~~It~e~Ll~~i~ 615 (643)
.|... +|.....+.++|+||||.|+ +|.|+|+|+|+||+.||+++|+.+|++||.++||+|+|+.+|+
T Consensus 261 ~~~~v-------p~~~~~k~~~~g~IvE~~~~--~G~wr~~R~R~DK~~~n~~~t~~~v~~si~~~vt~eeL~~~~~ 328 (330)
T 1ckm_A 261 LRKNV-------PVGKLDGYYNKGSIVECGFA--DGTWKYIQGRSDKNQANDRLTYEKTLLNIEENITIDELLDLFK 328 (330)
T ss_dssp TTEEE-------ECCCCSSCCCTTCEEEEEEE--TTEEEEEEECTTCSSCCBHHHHHHHHHHHHHCCCHHHHTTCC-
T ss_pred CCcee-------eeeeeehhhcCCeEEEEEEE--CCceEEEEEeCCCCCCCHHHHHHHHHHhhhcCCCHHHHHHhhc
Confidence 33333 33221112289999999998 6899999999999999999999999999999999999987654
No 5
>2c46_A MRNA capping enzyme; phosphatase, transferase, hydrolase, mRNA processing, multifunctional enzyme, nucleotidyltransferase; 1.6A {Homo sapiens} PDB: 1i9s_A 1i9t_A
Probab=100.00 E-value=6.8e-37 Score=310.84 Aligned_cols=195 Identities=38% Similarity=0.769 Sum_probs=177.0
Q ss_pred cCCCCCCCCCccCCCCCCcccCceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCeeEEEEcCCCCCCCCcchhc
Q 006472 81 YDRNKLPPGWLDCPPFGQEIGGCIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLK 160 (643)
Q Consensus 81 ~~~~~~p~~W~~~~~~g~~I~~~flp~k~Pl~~~~~~~i~~~~~~~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~ 160 (643)
...+.+|.+|++||++|+.|+++|||||+|+++.++..+..+++|+++++++.++..+.+|++||||+++.++|+++.++
T Consensus 23 ~~~~~~p~~Wl~~p~~g~~I~~rfia~~~P~~~~~~~~v~~~~r~~~~~v~~~l~~~~~~i~~VInL~~e~~~y~~~~~~ 102 (241)
T 2c46_A 23 MAHNKIPPRWLNCPRRGQPVAGRFLPLKTMLGPRYDSQVAEENRFHPSMLSNYLKSLKVKMGLLVDLTNTSRFYDRNDIE 102 (241)
T ss_dssp CTTCCCCTTCTTSCSBCCCBTTTEEEECCCCCGGGGGGSCGGGCCCHHHHHHHHHHHTCEEEEEEECSSCSCSSCTHHHH
T ss_pred ccCCCCChhhhcCCCCCCEeCCcEEEecCCcccchhhhccHhhcCCHHHHHHHHHHhCCCcceeeeccCCCCCCCHHHHH
Confidence 35789999999999999999999999999999999988988899999999999998888999999999988899999999
Q ss_pred cCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHHHhcCCCHHHHHHHHHh
Q 006472 161 KEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRSQSMSVAQAIKKFAE 240 (643)
Q Consensus 161 ~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~li~aYLm~~~g~s~~eAi~~~~~ 240 (643)
+.||+|+++|+.|++.+|+.+.+.+|++.+.+++++ .++++|+|||++|+||||++||||||+..||++++|++.|++
T Consensus 103 ~~gi~y~~~p~~D~~~~P~~~~l~~~~~~i~~~~~~--~~~~~VlVHC~aG~gRTGt~ia~yLm~~~~~s~~eAi~~vr~ 180 (241)
T 2c46_A 103 KEGIKYIKLQCKGHGECPTTENTETFIRLCERFNER--NPPELIGVHCTHGFNRTGFLICAFLVEKMDWSIEAAVATFAQ 180 (241)
T ss_dssp TTTCEEEECCCCCTTCCCCHHHHHHHHHHHTTC-------CEEEEEECSSSSHHHHHHHHHHHHHTTCCCHHHHHHHHHH
T ss_pred HCCCEEEEEecCCCCCCCChHHHHHHHHHHHHHHHh--CCCCeEEEECCCCCCHHHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 999999999999876799999999999988888763 357899999999999999999999999999999999999999
Q ss_pred cCCCccCCHHHHHHHHHHHhccCCCCCCCCCCCccccc
Q 006472 241 VRPPGIYKNEYIEALYTFYHEKRLDSTPCPSTPEWKRE 278 (643)
Q Consensus 241 ~Rp~~i~~~~~l~~L~~~y~~~~~~~~~~p~~P~W~~~ 278 (643)
+||.++++.+|+++|+++|.+... ...+|+.|+|+.+
T Consensus 181 ~R~~~i~~~~~l~~L~~~~~~~~~-~~~~~~~p~W~~~ 217 (241)
T 2c46_A 181 ARPPGIYKGDYLKELFRRYGDIEE-APPPPLLPDWCFE 217 (241)
T ss_dssp HSTTCCCCHHHHHHHHHHHSCGGG-CCCCCCCCTTCCC
T ss_pred HCCCCCCCHHHHHHHHHHHhhccc-CCCCCCccchhcc
Confidence 999999999999999999988643 4678999999863
No 6
>1yn9_A BVP, polynucleotide 5'-phosphatase; RNA triphosphatase, cysteine phosphatase, P-loop, hydrolase; HET: PO4; 1.50A {Autographa californicanucleopolyhedrovirus}
Probab=100.00 E-value=9.2e-33 Score=265.24 Aligned_cols=166 Identities=31% Similarity=0.572 Sum_probs=151.9
Q ss_pred CCCCCCCccCCCCCCcccC-ceeecCCCCccccccCCCC-CCCCCHHHHHHHHHHcCCCeeEEEEcCCCCCCCCcchhcc
Q 006472 84 NKLPPGWLDCPPFGQEIGG-CIIPSKVPLSEFFNDCIPP-GKRYSFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKK 161 (643)
Q Consensus 84 ~~~p~~W~~~~~~g~~I~~-~flp~k~Pl~~~~~~~i~~-~~~~~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~ 161 (643)
+++|++|++|+++|++|++ +||+|++|+++.+...+.. .++|++.++++. +.+|++||||+.+.+.|+++.+..
T Consensus 1 ~~~p~~w~~~~~~g~~i~~~~~i~~~~P~~~~~~~~~~~~~~~~~~~~ll~~----~~gi~~Vi~l~~~~~~~~~~~~~~ 76 (169)
T 1yn9_A 1 HMFPARWHNYLQCGQVIKDSNLICFKTPLRPELFAYVTSEEDVWTAEQIVKQ----NPSIGAIIDLTNTSKYYDGVHFLR 76 (169)
T ss_dssp -CCCTTGGGSCSBCCCCTTSSEEEECCCCCGGGGTTBCCGGGCCCHHHHHHH----CTTEEEEEECCSCSCSCCTHHHHH
T ss_pred CCCChhhhhCCCCCCCcCCCeeEEecCcchHhHhhcCCCcccCCCHHHHHhh----CCCcCEEEEcCCCCCCCCHHHHHh
Confidence 3799999999999999987 7999999999988777766 788999999874 478999999998888899999999
Q ss_pred CCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHHHhcCCCHHHHHHHHHhc
Q 006472 162 EGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRSQSMSVAQAIKKFAEV 241 (643)
Q Consensus 162 ~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~li~aYLm~~~g~s~~eAi~~~~~~ 241 (643)
.||+|+++|+.|+ .+|+.+.+..|++.+.+|+.+ .++++|+|||++|+||||+++|+|||...||++++|++.|+++
T Consensus 77 ~gi~~~~~~~~d~-~~p~~~~~~~~~~~~~~~~~~--~~~~~vlVHC~aG~~RTg~~va~~L~~~~~~~~~~a~~~~r~~ 153 (169)
T 1yn9_A 77 AGLLYKKIQVPGQ-TLPPESIVQEFIDTVKEFTEK--CPGMLVGVHCTHGINRTGYMVCRYLMHTLGIAPQEAIDRFEKA 153 (169)
T ss_dssp TTCEEEECCCCSS-SCCCHHHHHHHHHHHHHHHHH--STTSEEEEECSSSSHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_pred cCCEEEEEeCCCC-CCCCHHHHHHHHHHHHHHHHh--CCCCcEEEECCCCCChHHHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 9999999999996 688889999999999999874 4688999999999999999999999998899999999999999
Q ss_pred CCCccCCHHHHHHHH
Q 006472 242 RPPGIYKNEYIEALY 256 (643)
Q Consensus 242 Rp~~i~~~~~l~~L~ 256 (643)
||.++++++|+++|+
T Consensus 154 R~~~~~~~~f~~qL~ 168 (169)
T 1yn9_A 154 RGHKIERQNYVQDLL 168 (169)
T ss_dssp HTSCCCCHHHHHHHH
T ss_pred CCCCCCCHHHHHHHh
Confidence 999999999999996
No 7
>2cfm_A Thermostable DNA ligase; protein-nucleotide complex, cell cycle, cell division, DNA damage, DNA recombination, DNA repair, DNA replication; HET: AMP; 1.8A {Pyrococcus furiosus} PDB: 3rr5_A*
Probab=99.92 E-value=6.9e-25 Score=247.51 Aligned_cols=167 Identities=17% Similarity=0.230 Sum_probs=127.4
Q ss_pred ceeeeecCceeEEEEEEECCEEEEEeCCCccccccCCCCCcCCcccccccCC-CCeEeeEEEEEecCCCC----------
Q 006472 331 YYYATWKADGTRYMMLITIDGCYLIDRCFNFRRVQMRFPCRNSNEGLGEKTH-HFTLLDGEMIIDKLPDS---------- 399 (643)
Q Consensus 331 ~Y~V~eK~DG~R~ll~i~~~~vyLidR~~~~~~v~~~FP~~~~~~~~~~~~~-~~tlLDGElV~d~~~~~---------- 399 (643)
+|++++|+||+|+++++.++++++++|+++. ++..||..... +.+..+ .+++||||||.....+.
T Consensus 243 ~~~~E~K~DG~R~~i~~~~g~v~l~SR~g~~--~t~~fPel~~~--~~~~l~~~~~iLDGElv~~d~~g~~~~F~~L~~r 318 (561)
T 2cfm_A 243 EAEFEIKYDGARVQVHKDGSKIIVYSRRLEN--VTRAIPEIVEA--LKEAIIPEKAIVEGELVAIGENGRPLPFQYVLRR 318 (561)
T ss_dssp CEEEEEECCSEEEEEEEETTEEEEECTTCCB--CGGGCHHHHHH--HHHHBCSSEEEEEEEEEEBCTTSSBCCTHHHHHH
T ss_pred cEEEEEeEceEEEEEEEECCEEEEEeCCCCC--chhhhhhHHHH--HHHhCCCcceEeeeEEEEEcCCCcccCHHHHHHH
Confidence 8999999999999999999999999999983 36678875321 111122 68999999999642111
Q ss_pred ---C--------CcceEEEEeEeeecCCeeccCCCHHHHHHHHHHHhcCccccccccccccCCCCccCCCCCcEEEecce
Q 006472 400 ---R--------RQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLEPFRVRRKDF 468 (643)
Q Consensus 400 ---~--------~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~v~~p~~~~~~~~~~~~~p~~~~~~~pf~I~~K~~ 468 (643)
. ..+++|++||||++||++++++||.+|+++|++.+... + .+...++
T Consensus 319 ~~~~~~~~~~~~~~~~~~~vFDlL~l~g~~l~~~pl~eRr~~L~~~~~~~-------------~---------~i~~~~~ 376 (561)
T 2cfm_A 319 FRRKHNIEEMMEKIPLELNLFDVLYVDGQSLIDTKFIDRRRTLEEIIKQN-------------E---------KIKVAEN 376 (561)
T ss_dssp HHCCSCHHHHHHHSCEEEEEEEEEEETTEECTTSCHHHHHHHHHHHBCCC-------------S---------SEEECCE
T ss_pred hhcccchhhhcccCceEEEEEEEEeECCcCcccCCHHHHHHHHHHHhCcC-------------C---------cEEEeee
Confidence 0 12478999999999999999999999999999866321 1 1445555
Q ss_pred eechhHHHHHHHhcccccCCCceEEEEeCCCCCccC-CCCCeEEEecCCCceEEEEE
Q 006472 469 WLLSTVNKLLKEFIPKLSHDADGLVFQGWDDPYVPR-THEGLLKWKYARMNSVDFLF 524 (643)
Q Consensus 469 ~~~~~~~~ll~~~~~~l~h~~DGLIf~p~~spY~~G-~~~~llKWKP~~~nTvDF~l 524 (643)
+...+.+.+-+.+...+.++.||||+|+.++||.+| ++..|+||||.. +|+||+|
T Consensus 377 ~~~~~~~~~~~~~~~~~~~g~EGlv~K~~ds~Y~~G~Rs~~WlK~K~~~-dt~D~vV 432 (561)
T 2cfm_A 377 LITKKVEEAEAFYKRALEMGHEGLMAKRLDAVYEPGNRGKKWLKIKPTM-ENLDLVI 432 (561)
T ss_dssp EEESCHHHHHHHHHHHHHTTCCEEEEECTTCCCCTTCEEEEEEEECSSC-CCEEEEE
T ss_pred EEcCCHHHHHHHHHHHHHcCCceeEEeCCCCCCCCCCcCCCeEEEcccC-cceeEEE
Confidence 555543333333334678999999999999999999 578999999975 8999998
No 8
>2hiv_A Thermostable DNA ligase; ATP-dependent, open conformation; 2.05A {Sulfolobus solfataricus} PDB: 2hix_A*
Probab=99.90 E-value=2e-23 Score=237.87 Aligned_cols=168 Identities=17% Similarity=0.239 Sum_probs=128.3
Q ss_pred ceeeeecCceeEEEEEEECCEEEEEeCCCccccccCCCCCcCCcccccccC-CCCeEeeEEEEEecC-CCCC--------
Q 006472 331 YYYATWKADGTRYMMLITIDGCYLIDRCFNFRRVQMRFPCRNSNEGLGEKT-HHFTLLDGEMIIDKL-PDSR-------- 400 (643)
Q Consensus 331 ~Y~V~eK~DG~R~ll~i~~~~vyLidR~~~~~~v~~~FP~~~~~~~~~~~~-~~~tlLDGElV~d~~-~~~~-------- 400 (643)
+|++++|+||+|+++++.+++++|++|+++. ++..||..... +.+.. ..++|||||||.... .+..
T Consensus 274 ~~~~E~K~DG~R~qi~~~g~~v~l~SR~g~~--~t~~fP~l~~~--~~~~l~~~~~iLDGElv~~d~~~g~~l~F~~L~~ 349 (621)
T 2hiv_A 274 NAIVDYKYDGERAQIHKKEDKIFIFSRRLEN--ITSQYPDVVDY--VSKYIEGKEFIIEGEIVAIDPESGEMRPFQELMH 349 (621)
T ss_dssp CEEEEEECSSEEEEEEEETTEEEEECTTCCB--CGGGCHHHHHH--HHHHBCCSSEEEEEEEEEBCTTTCCBCCTHHHHH
T ss_pred cEEEEEEEcceeEEEEEcCCEEEEEcCCCcC--cHhhhhhHHHH--HHHhCCCcCeEEeEEEEEeecCCCCcCCHHHHhh
Confidence 8999999999999999999999999999983 36678865321 11112 368999999999641 1110
Q ss_pred ------------CcceEEEEeEeeecCCeeccCCCHHHHHHHHHHHhcCccccccccccccCCCCccCCCCCcEEEecce
Q 006472 401 ------------RQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLEPFRVRRKDF 468 (643)
Q Consensus 401 ------------~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~v~~p~~~~~~~~~~~~~p~~~~~~~pf~I~~K~~ 468 (643)
..+++|++||||++||++++++||.+|+++|++.+... + .+...++
T Consensus 350 r~~~~~~~~~~~~~~v~~~vFDlL~l~G~~l~~~pl~eRr~~L~~~~~~~-------------~---------~i~~~~~ 407 (621)
T 2hiv_A 350 RKRKSDIYEAIKEYPVNVFLFDLMYYEDVDYTTKPLEARRKLLESIVKPN-------------D---------YVKIAHH 407 (621)
T ss_dssp HHHCSCHHHHHHHSCEEEEEEEEEEETTEECTTSCHHHHHHHHHHHBCCC-------------S---------SEEECCE
T ss_pred hccccchhhhcccCceEEEEEeccccCCCccccCCHHHHHHHHHHHhCcC-------------C---------cEEEeee
Confidence 12578999999999999999999999999999976321 0 1444555
Q ss_pred eechhHHHHHHHhcccccCCCceEEEEeC--CCCCccC-CCCCeEEEecCCCc----eEEEEE
Q 006472 469 WLLSTVNKLLKEFIPKLSHDADGLVFQGW--DDPYVPR-THEGLLKWKYARMN----SVDFLF 524 (643)
Q Consensus 469 ~~~~~~~~ll~~~~~~l~h~~DGLIf~p~--~spY~~G-~~~~llKWKP~~~n----TvDF~l 524 (643)
+...+.+.+-+.+...+.++.||||+|+. ++||.+| |+..|+||||..++ |+||+|
T Consensus 408 ~~~~~~~~~~~~~~~~~~~g~EGlv~K~~~~ds~Y~~G~Rs~~WlK~K~~~~~~~~dt~D~vV 470 (621)
T 2hiv_A 408 IQANNVEDLKSFFYRAISEGGEGVMVKAIGKDAIYQAGARGWLWIKLKRDYQSEMADTVDLVV 470 (621)
T ss_dssp EEESSHHHHHHHHHHHHHTTCCEEEEECCSTTCCCCTTCEEEEEEEEETTCTTSSCEEEEEEE
T ss_pred EEeCCHHHHHHHHHHHHhcCCceEEEEecCCCCCccCCCcCCCeEEEechhccCcCceeEEEE
Confidence 55554333333333467899999999999 9999999 57899999998765 999998
No 9
>1vs0_A Putative DNA ligase-like protein RV0938/MT0965; OB fold, nucleotidyl transferase, structural genomic protein structure initiative; HET: APK MSE; 2.40A {Mycobacterium tuberculosis}
Probab=99.90 E-value=1.1e-23 Score=221.45 Aligned_cols=163 Identities=17% Similarity=0.225 Sum_probs=126.0
Q ss_pred cccceeeeecCceeEEEEEEECCEEEEEeCCCccccccCCCCCcCCc-ccccccCCCCeEeeEEEEEecCCCCC------
Q 006472 328 RQRYYYATWKADGTRYMMLITIDGCYLIDRCFNFRRVQMRFPCRNSN-EGLGEKTHHFTLLDGEMIIDKLPDSR------ 400 (643)
Q Consensus 328 ~~~~Y~V~eK~DG~R~ll~i~~~~vyLidR~~~~~~v~~~FP~~~~~-~~~~~~~~~~tlLDGElV~d~~~~~~------ 400 (643)
...+|++++|+||+|+++++.+++++|+||+++. ++..||+.... ..+ ...++|||||||.....+..
T Consensus 23 ~~~~~~~E~K~DG~R~~~~~~~g~v~l~SR~g~~--~t~~fPel~~~~~~l---~~~~~iLDGElv~~d~~g~~~F~~l~ 97 (310)
T 1vs0_A 23 KASQWAFEGXWDGYRLLVEADHGAVRLRSRSGRD--VTAEYPQLRALAEDL---ADHHVVLDGEAVVLDSSGVPSFSQMQ 97 (310)
T ss_dssp CTTTEEEEEECCSEEEEEEEETTEEEEEETTCCB--CGGGCGGGHHHHHHT---TTCEEEEEEEEECBCTTSCBCHHHHH
T ss_pred CCCCEEEEEccCcEEEEEEEECCEEEEEcCCCCC--chhhchhHHHHHHhC---CCccEEEeeEEEEECCCCCcCHHHHH
Confidence 3568999999999999999999999999999984 36788875331 111 12489999999996432210
Q ss_pred ----CcceEEEEeEeeecCCeeccCCCHHHHHHHHHHHhcCccccccccccccCCCCccCCCCCcEEEecceeechhHHH
Q 006472 401 ----RQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLEPFRVRRKDFWLLSTVNK 476 (643)
Q Consensus 401 ----~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~v~~p~~~~~~~~~~~~~p~~~~~~~pf~I~~K~~~~~~~~~~ 476 (643)
...++|++||||++||++++++||.+|+++|++.+...+ +...+++.. .+..
T Consensus 98 ~r~~~~~~~~~vFDll~~~g~~l~~~pl~eRr~~L~~~~~~~~-----------------------i~~~~~~~~-~~~~ 153 (310)
T 1vs0_A 98 NRGRDTRVEFWAFDLLYLDGRALLGTRYQDRRKLLETLANATS-----------------------LTVPELLPG-DGAQ 153 (310)
T ss_dssp TCCTTSCCEEEEEEEEEETTEECTTSCHHHHHHHHHHHHHHSC-----------------------CCCCCCCCS-SHHH
T ss_pred hhccCCcEEEEEEEeEEECCcCcccCCHHHHHHHHHHhccCCc-----------------------EEECccCch-HHHH
Confidence 124799999999999999999999999999999764211 111112221 3566
Q ss_pred HHHHhcccccCCCceEEEEeCCCCCccC-CCCCeEEEecCCCceEEEEE
Q 006472 477 LLKEFIPKLSHDADGLVFQGWDDPYVPR-THEGLLKWKYARMNSVDFLF 524 (643)
Q Consensus 477 ll~~~~~~l~h~~DGLIf~p~~spY~~G-~~~~llKWKP~~~nTvDF~l 524 (643)
+|+. .+.++.||||+|+.+++|.+| ++..|||||+. +|+||+|
T Consensus 154 ~~~~---~~~~g~EGlv~K~~ds~Y~~G~Rs~~WlK~K~~--~~~D~vv 197 (310)
T 1vs0_A 154 AFAC---SRKHGWEGVIAKRRDSRYQPGRRCASWVKDKHW--NTQEVVI 197 (310)
T ss_dssp HHHH---HHHTTCCEEEEEETTCCCCTTCEEEEEEEEESS--EEEEEEE
T ss_pred HHHH---HHHcCCceEEEeCCCCCcCCCCcChHHhccchh--eEEEEEE
Confidence 6764 467999999999999999999 78899999986 7999997
No 10
>3gde_A DNA ligase; DNA-binding domain, adenylation domain, OB-fold domain, ATP-binding, cell cycle, cell division, DNA damage, DNA recombination; HET: DNA; 2.30A {Archaeoglobus fulgidus}
Probab=99.88 E-value=2.6e-22 Score=225.78 Aligned_cols=164 Identities=23% Similarity=0.340 Sum_probs=124.6
Q ss_pred cceeeeecCceeEEEEEEECCEEEEEeCCCccccccCCCCCcCCcccccccCCCCeEeeEEEEEecCCCC----------
Q 006472 330 RYYYATWKADGTRYMMLITIDGCYLIDRCFNFRRVQMRFPCRNSNEGLGEKTHHFTLLDGEMIIDKLPDS---------- 399 (643)
Q Consensus 330 ~~Y~V~eK~DG~R~ll~i~~~~vyLidR~~~~~~v~~~FP~~~~~~~~~~~~~~~tlLDGElV~d~~~~~---------- 399 (643)
.+|++++|+||+|+++++.++.+.+++|+++ .++..||+.... +......++|||||||....+..
T Consensus 245 ~~~~~E~K~DG~R~qi~~~g~~v~l~SR~g~--d~t~~fPel~~~--~~~~l~~~~iLDGElv~~~~g~~~~F~~L~~r~ 320 (558)
T 3gde_A 245 RTAAVEWKFDGSRVQVHWDGSRVTIYSRRLE--NVTNALPDIVEE--IKKSVKPGVILDGEVIAVKEGKPMPFQHVLRRF 320 (558)
T ss_dssp SSEEEEEECSSEEEEEEECSSCCEEEETTCC--BCGGGCHHHHHH--HHHHBCSSEEEEEEEEEEETTEEECHHHHHHHH
T ss_pred cceEEEEeEeeEEEEEEEeCCEEEEEcCCCC--cccccchHHHHH--HHhhCCCCeEEEeEEEEcCCCcCCCHHHHHHHh
Confidence 5899999999999999999999999999998 346688875321 11112345999999998632110
Q ss_pred ----C------CcceEEEEeEeeecCCeeccCCCHHHHHHHHHHHhcCccccccccccccCCCCccCCCCCcEEEeccee
Q 006472 400 ----R------RQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLEPFRVRRKDFW 469 (643)
Q Consensus 400 ----~------~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~v~~p~~~~~~~~~~~~~p~~~~~~~pf~I~~K~~~ 469 (643)
. ..+++|++||+|++|| +++++||.+|+++|++.+..+ + .+...+.+
T Consensus 321 ~~~~~~~~~~~~~pv~~~vFDlL~l~G-~l~~~pl~eRr~~L~~~~~~~-------------~---------~i~~~~~~ 377 (558)
T 3gde_A 321 RRKHDVAKMVEKIPLEAHFFDILYHDG-ECIDLPLRERRKLLESAVNES-------------E---------KIKLAKQI 377 (558)
T ss_dssp HC--CTHHHHHHSCEEEEEEEEEEESS-BCTTSBHHHHHHHHHHHBCCC-------------S---------SEEECCEE
T ss_pred ccccchhhHhhcCCeEEEEEEEEeeCC-CccCCCHHHHHHHHHHhcCCC-------------C---------eEEEeeeE
Confidence 0 1247899999999999 999999999999999976321 0 13344444
Q ss_pred echh---HHHHHHHhcccccCCCceEEEEeCCCCCccC-CCCCeEEEecCCCceEEEEE
Q 006472 470 LLST---VNKLLKEFIPKLSHDADGLVFQGWDDPYVPR-THEGLLKWKYARMNSVDFLF 524 (643)
Q Consensus 470 ~~~~---~~~ll~~~~~~l~h~~DGLIf~p~~spY~~G-~~~~llKWKP~~~nTvDF~l 524 (643)
...+ +..+++ ..+.++.||||+|..+++|.+| |+..|+||||. ..|+||+|
T Consensus 378 ~~~~~~~~~~~~~---~~~~~g~EGlv~K~~ds~Y~~G~Rs~~WlK~K~~-~~t~D~vV 432 (558)
T 3gde_A 378 VTDSVDEVRKMYD---EAISAGHEGVMIKLPSSPYIPGKRGKNWLKVKAI-METLDLVV 432 (558)
T ss_dssp EESCHHHHHHHHH---HHHHTTCCEEEEECTTCBCCTTCEEEEEEEEESS-CCCEEEEE
T ss_pred ecCCHHHHHHHHH---HHHHcCCceeEEecCCCCCCCCCcCCceEEEecc-cceEEEEE
Confidence 4433 344554 4677999999999999999999 57899999986 68999997
No 11
>1fvi_A Chlorella virus DNA ligase-adenylate; adenylated DNA ligase; HET: AMP; 2.00A {Chlorella virus} SCOP: b.40.4.6 d.142.2.1 PDB: 2q2t_A* 2q2u_A* 1p8l_A*
Probab=99.87 E-value=3e-22 Score=209.21 Aligned_cols=158 Identities=18% Similarity=0.132 Sum_probs=110.4
Q ss_pred ccceeeeecCceeEEEEEEECCEEEEEeCCCccccccCCCCCcCCcccccccCCCCeEeeEEEEEecCC----------C
Q 006472 329 QRYYYATWKADGTRYMMLITIDGCYLIDRCFNFRRVQMRFPCRNSNEGLGEKTHHFTLLDGEMIIDKLP----------D 398 (643)
Q Consensus 329 ~~~Y~V~eK~DG~R~ll~i~~~~vyLidR~~~~~~v~~~FP~~~~~~~~~~~~~~~tlLDGElV~d~~~----------~ 398 (643)
..+|++++|+||+|+++ ++ +|++|+++.+ + .|+... .+... . +++||||||+.... .
T Consensus 18 ~~~~~~E~K~DG~R~~~----~g-~l~SR~g~~~--t--~p~l~~--~~~~~-~-~~iLDGElv~~~~~F~~l~~~~~~~ 84 (297)
T 1fvi_A 18 QFPCLATPKIAGIRSVK----QT-QMLSRTFKPI--R--NSVMNR--LLTEL-L-PEGSDGEISIEGATFQDTTSAVMTG 84 (297)
T ss_dssp CSSEEEEECCCSEEEEE----SS-SEECTTSCBC--S--CHHHHH--HHHHH-S-CTTEEEEEECTTSCHHHHHHHHHSC
T ss_pred CCcEEEEeeEeeeeEEe----cC-EEECCCCccc--C--cHHHHH--HHHhc-C-CeeEEEEEEECCCCHHHHHHHhccC
Confidence 46899999999999987 44 9999999833 2 253211 11111 3 89999999983210 0
Q ss_pred C--CCcceEEEEeEeeecCCeeccCCCHHHHHHHHHHHhcCccccccccccccCCCCccCCCCCcEEEecc--eeech--
Q 006472 399 S--RRQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLEPFRVRRKD--FWLLS-- 472 (643)
Q Consensus 399 ~--~~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~v~~p~~~~~~~~~~~~~p~~~~~~~pf~I~~K~--~~~~~-- 472 (643)
. ...+++|++||||+++ +.+||.+|++.|++.+..... +. ... .+...+ ....+
T Consensus 85 ~~~~~~~~~~~vFDll~l~----~~~pl~eRr~~L~~~~~~~~~-----------~~---~~~--~i~~~~~~~~~~~~~ 144 (297)
T 1fvi_A 85 HKMYNAKFSYYWFDYVTDD----PLKKYIDRVEDMKNYITVHPH-----------IL---EHA--QVKIIPLIPVEINNI 144 (297)
T ss_dssp C----CCEEEEEEEECSSC----TTSCHHHHHHHHHHHHHHCGG-----------GG---GCS--SEEEEECCCEEECSH
T ss_pred CCCCccceEEEEEeccCCC----CCCCHHHHHHHHHHHHhhcCC-----------cc---ccc--eEEEcCcceEecCCH
Confidence 0 1246899999999987 899999999999997642110 00 000 133333 33333
Q ss_pred -hHHHHHHHhcccccCCCceEEEEeCCCCCccCCCC----CeEEEecCCCceEEEEE
Q 006472 473 -TVNKLLKEFIPKLSHDADGLVFQGWDDPYVPRTHE----GLLKWKYARMNSVDFLF 524 (643)
Q Consensus 473 -~~~~ll~~~~~~l~h~~DGLIf~p~~spY~~G~~~----~llKWKP~~~nTvDF~l 524 (643)
.+..+++ ..+.++.||||+|+.++||.+||+. .||||||. .|+|++|
T Consensus 145 ~~~~~~~~---~~~~~g~EGlv~K~~ds~Y~~GRs~~~~g~wlK~K~~--~~~d~vV 196 (297)
T 1fvi_A 145 TELLQYER---DVLSKGFEGVMIRKPDGKYKFGRSTLKEGILLKMKQF--KDAEATI 196 (297)
T ss_dssp HHHHHHHH---HHHHTTCCSEEEECTTCCCCSSBCCTTTTSSEEECCC--EEEEEEE
T ss_pred HHHHHHHH---HHHHCCCcEEEEECCCCCcCCCCCCCCCCCeEEECCC--CCEEEEE
Confidence 3444554 4678999999999999999999988 99999996 5999997
No 12
>1x9n_A DNA ligase I; 5'-adenylated nicked DNA, protein-DNA complex, L complex; HET: DNA DOC AMP; 3.00A {Homo sapiens} SCOP: a.235.1.1 b.40.4.6 d.142.2.1
Probab=99.87 E-value=4e-22 Score=229.04 Aligned_cols=177 Identities=14% Similarity=0.200 Sum_probs=128.7
Q ss_pred hhhcccceeeeecCceeEEEEEEECC-EEEEEeCCCccccccCCCCCcCCc-ccccccCCCCeEeeEEEEEecCCCC---
Q 006472 325 QLLRQRYYYATWKADGTRYMMLITID-GCYLIDRCFNFRRVQMRFPCRNSN-EGLGEKTHHFTLLDGEMIIDKLPDS--- 399 (643)
Q Consensus 325 ~~l~~~~Y~V~eK~DG~R~ll~i~~~-~vyLidR~~~~~~v~~~FP~~~~~-~~~~~~~~~~tlLDGElV~d~~~~~--- 399 (643)
..+...+|++++|+||+|++++++++ .++|++|+++. ++..||+.... ..+......++|||||||.....+.
T Consensus 325 ~~~~~~~~~~E~K~DG~R~qih~~~~g~v~l~SR~g~d--~t~~fPel~~~l~~~~~~~~~~~ILDGElV~~d~~~g~~~ 402 (688)
T 1x9n_A 325 KRFEEAAFTCEYKYDGQRAQIHALEGGEVKIFSRNQED--NTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQIQ 402 (688)
T ss_dssp HHTTTSCEEEEEEESSEEEEEEECTTSCEEEECTTSCB--CTTTCHHHHHTSGGGBCTTCCCEEEEEEEEEECTTTCSBC
T ss_pred hhcCCCeEEEEEccccEeEEEEEcCCCeEEEEeCCCCc--ccccchHHHHHHHHhhccCCCCeEEeEEEEEEeCCCCCcC
Confidence 34556689999999999999999754 69999999983 36778875321 1111112468999999999432111
Q ss_pred -----------------CCcceEEEEeEeeecCCeeccCCCHHHHHHHHHHHhcCccccccccccccCCCCccCCCCCcE
Q 006472 400 -----------------RRQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLEPFR 462 (643)
Q Consensus 400 -----------------~~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~v~~p~~~~~~~~~~~~~p~~~~~~~pf~ 462 (643)
...+++|++||||++||++++++||.+|+++|++.+.... + .
T Consensus 403 ~F~~L~~r~r~~~~~~~~~~~v~~~vFDlL~l~G~~l~~~Pl~eRr~~L~~~~~~~~------------~---------~ 461 (688)
T 1x9n_A 403 PFQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRENFVETE------------G---------E 461 (688)
T ss_dssp CHHHHTTSCSSCCCGGGCCSEEEEEEEEEEEETTEECTTSCHHHHHHHHHHHBCCBT------------T---------T
T ss_pred CHHHHHHHhhcccchhhcccceEEEEEechhhcCCccccCCHHHHHHHHHHhhccCC------------C---------c
Confidence 0135899999999999999999999999999999763210 0 1
Q ss_pred EEecceeechhHHHHHHHhcccccCCCceEEEEeC--CCCCccC-CCCCeEEEecCCC----ceEEEEE
Q 006472 463 VRRKDFWLLSTVNKLLKEFIPKLSHDADGLVFQGW--DDPYVPR-THEGLLKWKYARM----NSVDFLF 524 (643)
Q Consensus 463 I~~K~~~~~~~~~~ll~~~~~~l~h~~DGLIf~p~--~spY~~G-~~~~llKWKP~~~----nTvDF~l 524 (643)
+...+++...+.+.+-+.+...+.++.||||+|+. +++|.+| |+..||||||... +|+||+|
T Consensus 462 i~~~~~~~~~~~~~~~~~~~~a~~~g~EGlV~K~~~~ds~Y~~GkRs~~WlK~K~~y~~~~~dt~D~vV 530 (688)
T 1x9n_A 462 FVFATSLDTKDIEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTLDLVV 530 (688)
T ss_dssp EEECCEECCCCHHHHHHHHHHHHHTSEEEEEEEESSSSCSSCTTTCSEEEEEEEHHHHHSSCEEEEEEE
T ss_pred EEEEeeEecCCHHHHHHHHHHHHhcCCceeEEeecccCCCCCCCCcCchHheeehhhhccccccccEEE
Confidence 34444444444333333233467899999999999 9999998 5779999999653 7999987
No 13
>3l2p_A DNA ligase 3; DNA ligase, DNA repair, ATP-binding, cell cycle, cell divisi damage; HET: DNA AMP; 3.00A {Homo sapiens}
Probab=99.85 E-value=2.6e-20 Score=210.24 Aligned_cols=165 Identities=18% Similarity=0.300 Sum_probs=120.7
Q ss_pred cceeeeecCceeEEEEEEECCEEEEEeCCCccccccCCCCCcCC-c-ccccc--cCCCCeEeeEEEEEecCC-CCC----
Q 006472 330 RYYYATWKADGTRYMMLITIDGCYLIDRCFNFRRVQMRFPCRNS-N-EGLGE--KTHHFTLLDGEMIIDKLP-DSR---- 400 (643)
Q Consensus 330 ~~Y~V~eK~DG~R~ll~i~~~~vyLidR~~~~~~v~~~FP~~~~-~-~~~~~--~~~~~tlLDGElV~d~~~-~~~---- 400 (643)
.+|++++|+||+|++++..++++.+++|+++.. ||.... . ..+.. ....++|||||||.-... +..
T Consensus 247 ~~~~~E~K~DG~R~qih~~g~~v~l~SR~g~~~-----~p~~~~~l~~~l~~~~~~~~~~iLDGElv~~d~~~g~~~~F~ 321 (579)
T 3l2p_A 247 NGMFSEIKYDGERVQVHKNGDHFSYFSRSLKPV-----LPHKVAHFKDYIPQAFPGGHSMILDSEVLLIDNKTGKPLPFG 321 (579)
T ss_dssp TCEEEEECCCSEEEEEEEETTEEEEECTTSCBC-----CGGGTTTGGGTHHHHSTTCSEEEEEEEEEEBCTTTCCBCCGG
T ss_pred CCeEEEEccCcEEEEEEEECCEEEEECCCCCcc-----ChhHHHHHHHHHHHhcCcCCceEEEeEEEEEeCCCCcccCHH
Confidence 579999999999999999999999999998732 443211 0 00100 113569999999984321 110
Q ss_pred -----------CcceEEEEeEeeecCCeeccCCCHHHHHHHHHHHhcCccccccccccccCCCCccCCCCCcEEEeccee
Q 006472 401 -----------RQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLEPFRVRRKDFW 469 (643)
Q Consensus 401 -----------~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~v~~p~~~~~~~~~~~~~p~~~~~~~pf~I~~K~~~ 469 (643)
..++.|++||+|++||++++++||.+|+++|++.+.. .. + . +...++.
T Consensus 322 ~L~~~~~~~~~~~~v~~~vFDlL~l~G~~L~~~Pl~eRr~~L~~~~~~-~~-----------~-------~--i~~~~~~ 380 (579)
T 3l2p_A 322 TLGVHKKAAFQDANVCLFVFDCIYFNDVSLMDRPLCERRKFLHDNMVE-IP-----------N-------R--IMFSEMK 380 (579)
T ss_dssp GGSHHHHHHCSSCCEEEEEEEEEEETTEECTTSCHHHHHHHHHHHCCC-BT-----------T-------T--EEECCEE
T ss_pred HHHHHhhhhcccCCeEEEEEEeeccCCCccccCCHHHHHHHHHHHhhc-CC-----------C-------e--EEEeeeE
Confidence 1268999999999999999999999999999996632 10 0 1 3333333
Q ss_pred ec---hhHHHHHHHhcccccCCCceEEEEeCCCCCccCCCCCeEEEecCCC------ceEEEEE
Q 006472 470 LL---STVNKLLKEFIPKLSHDADGLVFQGWDDPYVPRTHEGLLKWKYARM------NSVDFLF 524 (643)
Q Consensus 470 ~~---~~~~~ll~~~~~~l~h~~DGLIf~p~~spY~~G~~~~llKWKP~~~------nTvDF~l 524 (643)
.+ ..+..+++ ..+.++.||||+|..++||.+|+. .|+|||+... .|+|++|
T Consensus 381 ~~~~~~~~~~~~~---~a~~~g~EGlv~K~~ds~Y~~Grr-~WlK~K~~y~~~g~~~~t~D~vV 440 (579)
T 3l2p_A 381 RVTKALDLADMIT---RVIQEGLEGLVLKDVKGTYEPGKR-HWLKVKKDYLNEGAMADTADLVV 440 (579)
T ss_dssp EECSHHHHHHHHH---HHHHTTCCCEEEEESSCCCCTTCE-EEEEECTTTCC---CCEEEEEEE
T ss_pred EcCCHHHHHHHHH---HHHHhCCCceEEecCcCCCCCCCe-eeEEEechhhccccccccccEEE
Confidence 33 33445555 456789999999999999999997 8999999854 7999987
No 14
>1a0i_A DNA ligase; DNA replication; HET: DNA ATP; 2.60A {Enterobacteria phage T7} SCOP: b.40.4.6 d.142.2.1
Probab=99.84 E-value=6.3e-21 Score=203.65 Aligned_cols=187 Identities=16% Similarity=0.137 Sum_probs=127.7
Q ss_pred cccccchhhhhh-hcc-cceeeeecCceeEEEEEEE-CCEEEEEeCCCccc-cc---cCCCCCcCCcccccc---cCCCC
Q 006472 315 HPVSLNSDNLQL-LRQ-RYYYATWKADGTRYMMLIT-IDGCYLIDRCFNFR-RV---QMRFPCRNSNEGLGE---KTHHF 384 (643)
Q Consensus 315 qPVslsr~~l~~-l~~-~~Y~V~eK~DG~R~ll~i~-~~~vyLidR~~~~~-~v---~~~FP~~~~~~~~~~---~~~~~ 384 (643)
+||+.--..+.. +.. ..|++++|+||+|+++++. ++.++|+||+++-+ .+ +-.||.... .+.. ....+
T Consensus 9 ~pv~pmL~~~~~~l~~~~~~~~E~K~DG~R~~~~~~~~g~v~l~SR~g~~~~~l~~~~~~~p~~~~--~l~~~~~~~~~~ 86 (348)
T 1a0i_A 9 KAVSFVESAIKKALDNAGYLIAEIKYDGVRGNICVDNTANSYWLSRVSKTIPALEHLNGFDVRWKR--LLNDDRCFYKDG 86 (348)
T ss_dssp EEEECCHHHHHHHHHHHSSEEEEECCCSEEEEEEEETTSEEEEECTTSCBCGGGGGGCEECHHHHH--HHHSTTCCCTTE
T ss_pred CcCchhhhcHHHHHhhcCcEEEEEeeceeEEEEEEeCCCeEEEEcCCCCCCcchhhhhcccchHHH--HHhhhhccCCCC
Confidence 477444455543 333 3566677999999999998 57899999998721 11 013332211 0110 12348
Q ss_pred eEeeEEEEEecCC-----------------------------C-C-------CCcceEEEEeEeeecC----Ceec---c
Q 006472 385 TLLDGEMIIDKLP-----------------------------D-S-------RRQERRYLIYDMMAIN----QASV---I 420 (643)
Q Consensus 385 tlLDGElV~d~~~-----------------------------~-~-------~~~~~~yliFDiL~~~----G~~l---~ 420 (643)
++||||||+...+ . . ...+++|++||||++| |+++ +
T Consensus 87 ~iLDGElv~~~~~F~~l~~~~~~k~~~~k~v~~~~~~~r~~~~~~~~i~~~~~~~~~~~~vFDll~l~~~~~G~~l~~~~ 166 (348)
T 1a0i_A 87 FMLDGELMVKGVDFNTGSGLLRTKWTDTKNQEFHEELFVEPIRKKDKVPFKLHTGHLHIKLYAILPLHIVESGEDCDVMT 166 (348)
T ss_dssp EEEEEEEEESSSCTTTHHHHHHCCSCCSSBSSCC--------CCCSCCCCCBCTTTEEEEEEEEEEHHHHHHCCCEEEEH
T ss_pred EEEEEEEEEeCCCHHHHHHHhcccccccccccccccccccccccccccccccccCcEEEEEEeeEeeCCCCCCccchhhc
Confidence 9999999984211 0 0 0135789999999999 9999 8
Q ss_pred CCCHHHHHHHHHHHhcCccccccccccccCCCCccCCCCCcEEEecceeechhHHHHHHHhcccccCCCceEEEEeCCCC
Q 006472 421 ERPFYERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLEPFRVRRKDFWLLSTVNKLLKEFIPKLSHDADGLVFQGWDDP 500 (643)
Q Consensus 421 ~~pf~eR~~~L~~~v~~p~~~~~~~~~~~~~p~~~~~~~pf~I~~K~~~~~~~~~~ll~~~~~~l~h~~DGLIf~p~~sp 500 (643)
.+||.+|+++|++.+.. . | .-.+.+.+++.+++.+.+-+-+...+.++.||||+|..+++
T Consensus 167 ~~pl~eRr~~L~~l~~~-~------------~-------~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~EGlv~K~~ds~ 226 (348)
T 1a0i_A 167 LLMQEHVKNMLPLLQEY-F------------P-------EIEWQAAESYEVYDMVELQQLYEQKRAEGHEGLIVKDPMCI 226 (348)
T ss_dssp HHHHHHHHHHHHHHHHH-C------------T-------TSEEEECCEEEESSHHHHHHHHHHHHTTTCCCEEEECTTCE
T ss_pred cCCHHHHHHHHHHHhhh-C------------C-------CCeEEEeccEecCCHHHHHHHHHHHHHcCCceEEEeCCCCC
Confidence 99999999999986531 0 0 01256666666544443333333467899999999999999
Q ss_pred CccCCCCCeEEEecCCCceEEEEEE
Q 006472 501 YVPRTHEGLLKWKYARMNSVDFLFE 525 (643)
Q Consensus 501 Y~~G~~~~llKWKP~~~nTvDF~l~ 525 (643)
|.+|++..|+||||.. |+||+|-
T Consensus 227 Y~~Grr~~wlK~K~~~--~~D~vVi 249 (348)
T 1a0i_A 227 YKRGKKSGWWKMKPEN--EADGIIQ 249 (348)
T ss_dssp ECSEEEEEEEEESCCE--EEEEEEE
T ss_pred CCCCCccCcEEEeecc--cEEEEEE
Confidence 9999876799999976 9999983
No 15
>3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus musculus} PDB: 3rgq_A*
Probab=99.83 E-value=6.1e-20 Score=172.78 Aligned_cols=122 Identities=22% Similarity=0.367 Sum_probs=102.9
Q ss_pred CCeeEEEEcCCCCCCC----CcchhccCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCCh
Q 006472 139 RKLGLVIDLTNTTRYY----PTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNR 214 (643)
Q Consensus 139 ~~I~~VIdLt~~~~~y----~~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~R 214 (643)
.+|++||||+.+.+.. +++.+...||+|+++|+.|....|..+.+.+++ +||+.....+++|+|||.+|+||
T Consensus 27 ~gi~~Vi~l~~~~e~~~~~~~~~~~~~~gi~~~~~p~~d~~~~~~~~~~~~~~----~~i~~~~~~~~~vlVHC~~G~~R 102 (157)
T 3rgo_A 27 ENVRGVITMNEEYETRFLCNTSKEWKKAGVEQLRLSTVDMTGVPTLANLHKGV----QFALKYQALGQCVYVHCKAGRSR 102 (157)
T ss_dssp SCEEEEEEESCCTTTTTSSCCHHHHHHTTCEEEEECCCTTTSSCCHHHHHHHH----HHHHHHHHTTCEEEEESSSSSSH
T ss_pred cCCCEEEECccccccccccCCHHHHHHCCCeEEEecCCCCCCCChHHHHHHHH----HHHHHHHHCCCEEEEECCCCCCh
Confidence 5799999999765432 345677789999999999974577776665554 55555555788999999999999
Q ss_pred hHHHHHHHHHHhcCCCHHHHHHHHHhcCCCccCCHHHHHHHHHHHhccCC
Q 006472 215 TGYMIVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEKRL 264 (643)
Q Consensus 215 SG~li~aYLm~~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~~~ 264 (643)
||+++++|||...||++++|++.++++||.+.++++|+++|..|+..+..
T Consensus 103 sg~~~~a~l~~~~~~~~~~a~~~v~~~R~~~~~~~~~~~~L~~~~~~l~~ 152 (157)
T 3rgo_A 103 SATMVAAYLIQVHNWSPEEAIEAIAKIRSHISIRPSQLEVLKEFHKEITA 152 (157)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHHHHHHHSTTCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999887643
No 16
>2oud_A Dual specificity protein phosphatase 10; A central five-stranded B-sheet, hydrolase; 2.80A {Homo sapiens}
Probab=99.83 E-value=2.5e-20 Score=180.19 Aligned_cols=132 Identities=20% Similarity=0.352 Sum_probs=109.3
Q ss_pred CCeeEEEEcCCCCCCCCcchhccCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHH
Q 006472 139 RKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYM 218 (643)
Q Consensus 139 ~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~l 218 (643)
.+|++||||+.+.+.+. ....|++|+++|+.|. ..++ +...+..+.+||+.....+++|+|||++|+||||++
T Consensus 32 ~gI~~Vi~l~~e~p~~~---~~~~~i~~~~ipi~D~-~~~~---l~~~~~~~~~~i~~~~~~~~~VlVHC~aG~~RSg~~ 104 (177)
T 2oud_A 32 LNIGYVINVTTHLPLYH---YEKGLFNYKRLPATDS-NKQN---LRQYFEEAFEFIEEAHQCGKGLLIHCQAGVSRSATI 104 (177)
T ss_dssp TTEEEEEECCSSSCCTT---TTTTCSEEEECCCCCC-SSCC---CHHHHHHHHHHHHHHHHTTCEEEEECSSSSSHHHHH
T ss_pred CCCcEEEEecCCCCccc---ccCCCceEEEEECCCC-Cccc---HHHHHHHHHHHHHHHHhcCCcEEEEcCCCCCchHHH
Confidence 57999999997644331 3456999999999985 2232 233455677888876667899999999999999999
Q ss_pred HHHHHHHhcCCCHHHHHHHHHhcCCCccCCHHHHHHHHHHHhccCCCCCCCCCCCcccc
Q 006472 219 IVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEKRLDSTPCPSTPEWKR 277 (643)
Q Consensus 219 i~aYLm~~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~~~~~~~~p~~P~W~~ 277 (643)
++||||...||++++|++.++++||.+.+|.+|+.+|..|+..+..+..+....|.|..
T Consensus 105 v~ayLm~~~~~~~~~A~~~v~~~Rp~~~pn~~f~~qL~~~e~~l~~~~~~~~~~p~~~~ 163 (177)
T 2oud_A 105 VIAYLMKHTRMTMTDAYKFVKGKRPIISPNLNFMGQLLEFEEDLNNGVTPRILTPKLMG 163 (177)
T ss_dssp HHHHHHHTSCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHHHHHHHTSSCCCCCTTSCC
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHCCCcCCCHHHHHHHHHHHHHHhcCCCCcccCcchhH
Confidence 99999999999999999999999999999999999999999887765556677888875
No 17
>3s4o_A Protein tyrosine phosphatase-like protein; structural genomics, medical structural genomics of pathogen protozoa, MSGPP, unknown function; HET: MSE EPE; 2.30A {Leishmania major}
Probab=99.83 E-value=5.6e-20 Score=174.53 Aligned_cols=139 Identities=19% Similarity=0.251 Sum_probs=115.8
Q ss_pred CceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCeeEEEEcCCCCCCCCcchhccCCcEEEEeeccCCCCCCCHH
Q 006472 102 GCIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNA 181 (643)
Q Consensus 102 ~~flp~k~Pl~~~~~~~i~~~~~~~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~~ 181 (643)
.+||++..|+..+... .++.+. ..+|++||+|+.+ .|+++.+...||+|+++|+.|. .+|+.+
T Consensus 23 ~~~i~tq~P~~~t~~~------------~~~~l~--~~gi~~Iv~l~~~--~~~~~~~~~~~i~~~~~p~~d~-~~p~~~ 85 (167)
T 3s4o_A 23 FHFLILDAPSPSNLPT------------YIKELQ--HRGVRHLVRVCGP--TYDATLVKSRGIDVHSWPFDDG-APPTRA 85 (167)
T ss_dssp EEEEEECCCCGGGHHH------------HHHHHH--TTTEEEEEECSCC--CSCTHHHHTTTCEEEECCCCTT-CCCCHH
T ss_pred ceEEEeCCCchhhHHH------------HHHHHH--HCCCCEEEECCCC--CCCHHHHHHCCCeEEEeccCCC-CCCCHH
Confidence 4799999998875443 333343 3689999999964 6788888889999999999986 688888
Q ss_pred HHHHHHHHHHHHHHhcc----cCCCeEEEEcCCCCChhHHHHHHHHHHhcCCCHHHHHHHHHhcCCCccCCHHHHHHHHH
Q 006472 182 SVNNFVYEVTQFLSRQK----HSKKYILVHCTHGHNRTGYMIVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYT 257 (643)
Q Consensus 182 ~i~~f~~~v~~fi~~~~----~~~~~VlVHC~~G~~RSG~li~aYLm~~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~ 257 (643)
.+..|++.+.+.+.... .++++|+|||++|+||||+++|+|||...||++++|++.+++.||..+. ..|...|++
T Consensus 86 ~~~~~~~~i~~~~~~~~~~~~~~~~~vlVHC~aG~~RTg~~~a~~L~~~~~~~~~~a~~~vr~~R~~~v~-~~Q~~fl~~ 164 (167)
T 3s4o_A 86 VLDSWLKLLDTELARQQEDPSVPPPTIGVHCVAGLGRAPILVALALVEYGNVSALDAIALIREKRKGAIN-QTQMHWITK 164 (167)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCCCCEEEEECSSSSSHHHHHHHHHHHHTTCCCHHHHHHHHHHHSTTCSC-HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhccccCCCcEEEECCCCCCHHHHHHHHHHHHhCCCCHHHHHHHHHHHCCCCCC-HHHHHHHHh
Confidence 88888887777665322 3478999999999999999999999997799999999999999999986 888888876
Q ss_pred H
Q 006472 258 F 258 (643)
Q Consensus 258 ~ 258 (643)
|
T Consensus 165 ~ 165 (167)
T 3s4o_A 165 Y 165 (167)
T ss_dssp C
T ss_pred h
Confidence 4
No 18
>3emu_A Leucine rich repeat and phosphatase domain containing protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.30A {Entamoeba histolytica}
Probab=99.82 E-value=4.6e-20 Score=175.65 Aligned_cols=117 Identities=15% Similarity=0.221 Sum_probs=98.0
Q ss_pred CCeeEEEEcCCCCCCCCcchhccCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHH
Q 006472 139 RKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYM 218 (643)
Q Consensus 139 ~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~l 218 (643)
.+|++|||++.+.+.+ + ..|++|+++|+.|. |. ..+..++..+.+||+++...+++|+|||.+|+||||++
T Consensus 34 ~gIt~Vlnl~~~~~~~----~-~~~~~~~~ipi~D~---~~-~~l~~~~~~~~~fI~~~~~~~~~VlVHC~~G~sRS~~v 104 (161)
T 3emu_A 34 NNISSILLVGIEVPSL----F-KDQCDILRLDIVSE---EG-HQLYDSIPNAIKFIIRSIQRKEGVLIISGTGVNKAPAI 104 (161)
T ss_dssp TTEEEEEEEC------------CTTSEEEEECCCCS---ST-THHHHHHHHHHHHHHHHHHTTCEEEEEESSSSSHHHHH
T ss_pred CCCCEEEEeCCCCccc----c-CCCCEEEEEeCcCC---CC-CcHHHHHHHHHHHHHHHHhcCCeEEEEcCCCCcHHHHH
Confidence 5899999999654322 2 24899999999884 33 34566778888999987778899999999999999999
Q ss_pred HHHHHHHhcCCCHHHHHHHHHhcCCCccCCHHHHHHHHHHHhccCC
Q 006472 219 IVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEKRL 264 (643)
Q Consensus 219 i~aYLm~~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~~~ 264 (643)
++||||...||++++|++.++++||.+.+|.+|++||..|...+..
T Consensus 105 v~ayLm~~~~~s~~~A~~~v~~~Rp~i~pn~~f~~qL~~~e~~L~~ 150 (161)
T 3emu_A 105 VIAFLMYYQRLSFINAFNKVQGLYPLIDIESGFILQLKLFEKKLEK 150 (161)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHCCCcCCCHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999998876543
No 19
>3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine phosphatase, hydrolase; 1.26A {Homo sapiens}
Probab=99.82 E-value=2.7e-20 Score=173.56 Aligned_cols=114 Identities=18% Similarity=0.284 Sum_probs=96.2
Q ss_pred CCeeEEEEcCCCCCCCCcchhccCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHH
Q 006472 139 RKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYM 218 (643)
Q Consensus 139 ~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~l 218 (643)
.+|++||||+.+.+.+. ..|++|+++|+.|.. .++ +..++..+.+||+++...+++|+|||.+|+||||++
T Consensus 28 ~gI~~Vl~l~~~~~~~~-----~~~~~~~~ipi~D~~-~~~---~~~~~~~~~~fi~~~~~~~~~VlVHC~~G~sRS~~~ 98 (144)
T 3s4e_A 28 NKVTHILNVAYGVENAF-----LSDFTYKSISILDLP-ETN---ILSYFPECFEFIEEAKRKDGVVLVHSNAGVSRAAAI 98 (144)
T ss_dssp TTCCEEEECSSSCCCCC-----TTTSEEEECCCCCCT-TSC---GGGGHHHHHHHHHHHHHTTCCEEEECSSSSSHHHHH
T ss_pred cCCCEEEEccCCCCCCC-----CCCCEEEEEeccCCC-CCc---hHHHHHHHHHHHHHHHHcCCeEEEEcCCCCchHHHH
Confidence 57999999987544322 248999999999852 222 334566677888877778899999999999999999
Q ss_pred HHHHHHHhcCCCHHHHHHHHHhcCCCccCCHHHHHHHHHHHhc
Q 006472 219 IVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHE 261 (643)
Q Consensus 219 i~aYLm~~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~ 261 (643)
++||||...||++++|++.++++||.+.+|.+|+.+|..|+..
T Consensus 99 v~ayLm~~~~~~~~~A~~~v~~~Rp~~~pn~~f~~qL~~~e~~ 141 (144)
T 3s4e_A 99 VIGFLMNSEQTSFTSAFSLVKNARPSICPNSGFMEQLRTYQEG 141 (144)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHSTTCCCCHHHHHHHHHTTHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHCCCcCCCHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999987754
No 20
>3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase, nucleus; 2.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1m3g_A
Probab=99.82 E-value=2.8e-20 Score=173.27 Aligned_cols=115 Identities=13% Similarity=0.222 Sum_probs=95.8
Q ss_pred CCeeEEEEcCCCCCCCCcchhccCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHH
Q 006472 139 RKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYM 218 (643)
Q Consensus 139 ~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~l 218 (643)
.+|++||||+.+.+.+. ..|++|+++|+.|. ..++ +...+..+.+||++....+++|+|||.+|+||||++
T Consensus 28 ~gI~~Vi~l~~~~~~~~-----~~~~~~~~ip~~D~-~~~~---~~~~~~~~~~~i~~~~~~~~~VlVHC~~G~~RS~~~ 98 (144)
T 3ezz_A 28 LGITALLNVSSDCPNHF-----EGHYQYKCIPVEDN-HKAD---ISSWFMEAIEYIDAVKDCRGRVLVHSQAGISRSATI 98 (144)
T ss_dssp TTCCEEEECSSSCCCTT-----TTTSEEEECCCCSS-SSCC---TTTTHHHHHHHHHHHHHTTCCEEEEESSSSSHHHHH
T ss_pred CCCeEEEEccCCCCccC-----CCCceEEEEEcccC-CCCC---hHHHHHHHHHHHHHHHhcCCeEEEECCCCCChhHHH
Confidence 57999999997653322 25899999999986 3333 223445566777766667899999999999999999
Q ss_pred HHHHHHHhcCCCHHHHHHHHHhcCCCccCCHHHHHHHHHHHhcc
Q 006472 219 IVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEK 262 (643)
Q Consensus 219 i~aYLm~~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~ 262 (643)
++||||...||++++|++.++++||.+.+|.+|++||..|...+
T Consensus 99 ~~aylm~~~~~~~~~A~~~v~~~Rp~~~pn~~f~~qL~~~e~~l 142 (144)
T 3ezz_A 99 CLAYLMMKKRVRLEEAFEFVKQRRSIISPNFSFMGQLLQFESQV 142 (144)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHTTCTTCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHCCccCCCHhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999887654
No 21
>1ohe_A CDC14B, CDC14B2 phosphatase; protein phosphatase, cell cycle, hydrolase; HET: SEP; 2.20A {Homo sapiens} SCOP: c.45.1.1 c.45.1.1 PDB: 1ohc_A 1ohd_A
Probab=99.82 E-value=1.3e-19 Score=193.06 Aligned_cols=147 Identities=22% Similarity=0.313 Sum_probs=119.9
Q ss_pred ccCceeecCCCCccccccCCCCCCC-CCHHHHHHHHHHcCCCeeEEEEcCCCCCCCCcchhccCCcEEEEeeccCCCCCC
Q 006472 100 IGGCIIPSKVPLSEFFNDCIPPGKR-YSFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVP 178 (643)
Q Consensus 100 I~~~flp~k~Pl~~~~~~~i~~~~~-~~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P 178 (643)
++++|++++.|.+... ++.+.+ +++.+.++.+++ .+|++||||+ .+.|+++.+...||+|+++|+.|+ ..|
T Consensus 182 ~p~~~i~~~~P~~~~~---~~~~~~~~~~~~~~~~L~~--~GI~~VInL~--~~~y~~~~~~~~gi~~~~ipi~D~-~~P 253 (348)
T 1ohe_A 182 IPDRFIAFCGPHSRAR---LESGYHQHSPETYIQYFKN--HNVTTIIRLN--KRMYDAKRFTDAGFDHHDLFFADG-STP 253 (348)
T ss_dssp ETTTEEEECCCCSSCB---CSTTCCBCCTHHHHHHHHH--TTEEEEEECS--CCSSCTHHHHTTTCEEEECCCCTT-CCC
T ss_pred eCCeEEEECCCccccc---cccccccCCHHHHHHHHHH--cCCCEEEECC--CCcCChhhhhcCCcEEEEecCCCC-CCC
Confidence 4578999999987632 222333 467777777776 4699999999 446888888889999999999996 688
Q ss_pred CHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHHHhcCCCHHHHHHHHHhcCCCccC--CHHHHHHHH
Q 006472 179 DNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRSQSMSVAQAIKKFAEVRPPGIY--KNEYIEALY 256 (643)
Q Consensus 179 ~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~li~aYLm~~~g~s~~eAi~~~~~~Rp~~i~--~~~~l~~L~ 256 (643)
+.+.+..|++.+ ..++++|+|||++|+||||++||||||...||++++|++.++++||+++. +++|+.+|.
T Consensus 254 ~~~~~~~fi~~~-------~~~~~~VLVHC~aG~gRTGtvvaayLm~~~g~s~~eAl~~vr~~Rp~~i~~pnq~Fl~qL~ 326 (348)
T 1ohe_A 254 TDAIVKEFLDIC-------ENAEGAIAVHSKAGLGRTGTLIACYIMKHYRMTAAETIAWVRICRPGSVIGPQQQFLVMKQ 326 (348)
T ss_dssp CHHHHHHHHHHH-------HSCSSEEEEECSSSSHHHHHHHHHHHHHHHCCCHHHHHHHHHHHSTTCSCTHHHHHHHHHH
T ss_pred CHHHHHHHHHHH-------HhCCCcEEEECCCCCChHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCCccCHHHHHHHHHH
Confidence 887776665443 35689999999999999999999999998999999999999999998665 679999998
Q ss_pred HHHhc
Q 006472 257 TFYHE 261 (643)
Q Consensus 257 ~~y~~ 261 (643)
.+.+.
T Consensus 327 ~~~w~ 331 (348)
T 1ohe_A 327 TNLWL 331 (348)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76554
No 22
>1rxd_A Protein tyrosine phosphatase type IVA, member 1; protein tyrosine phosphatase IVA1...; structural genomics, NYSGXRC, unknown function, PSI; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1xm2_A 1zck_A 1r6h_A 1v3a_A
Probab=99.82 E-value=2.2e-19 Score=168.96 Aligned_cols=153 Identities=18% Similarity=0.268 Sum_probs=117.4
Q ss_pred CccCCCCCC-cc-cCceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCeeEEEEcCCCCCCCCcchhccCCcEEE
Q 006472 90 WLDCPPFGQ-EI-GGCIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEGIKHV 167 (643)
Q Consensus 90 W~~~~~~g~-~I-~~~flp~k~Pl~~~~~~~i~~~~~~~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~~gI~y~ 167 (643)
|.+.|.... ++ +.+||.+..|+..+ ..+..+.+.. .+|++||+|+.. .|++..+...|++|+
T Consensus 2 ~~~~p~~~~~~~~~~~~i~s~~p~~~t------------~~df~~~l~~--~gi~~Iv~l~~~--~~~~~~~~~~~~~~~ 65 (159)
T 1rxd_A 2 RMNRPAPVEVTYKNMRFLITHNPTNAT------------LNKFIEELKK--YGVTTIVRVCEA--TYDTTLVEKEGIHVL 65 (159)
T ss_dssp ------CEEEEETTEEEEECCCCCGGG------------HHHHHHHHHH--TTEEEEEECSCC--CSCCHHHHHTTCEEE
T ss_pred CCCCCCcccccCCCceEEEeCCCcccc------------HHHHHHHHHH--cCCCEEEEcCCC--ccCHHHHHHcCCEEE
Confidence 666665332 23 45899999986653 3444444443 579999999954 577777878899999
Q ss_pred EeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHHHhcCCCHHHHHHHHHhcCCCccC
Q 006472 168 KIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRSQSMSVAQAIKKFAEVRPPGIY 247 (643)
Q Consensus 168 ~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~li~aYLm~~~g~s~~eAi~~~~~~Rp~~i~ 247 (643)
++|+.|. .+|+.+.+.+++..+.+++. ..++++|+|||++|+||||+++|+|||. .|+++++|++.+++.||.++
T Consensus 66 ~~p~~d~-~~~~~~~~~~~~~~i~~~~~--~~~~~~vlVHC~aG~~Rtg~~~a~~l~~-~~~~~~~a~~~vr~~R~~~~- 140 (159)
T 1rxd_A 66 DWPFDDG-APPSNQIVDDWLSLVKIKFR--EEPGCCIAVHCVAGLGRAPVLVALALIE-GGMKYEDAVQFIRQKRRGAF- 140 (159)
T ss_dssp ECCC--C-CCCCHHHHHHHHHHHHHHHH--HSTTCEEEEECSSSSTTHHHHHHHHHHH-TTCCHHHHHHHHHTTCTTCC-
T ss_pred eCCCcCC-CCCCHHHHHHHHHHHHHHHH--hCCCCeEEEECCCCCCHHHHHHHHHHHH-hCCCHHHHHHHHHHHCCCCC-
Confidence 9998774 67888888888888887776 3457899999999999999999999997 69999999999999999988
Q ss_pred CHHHHHHHHHHHhccC
Q 006472 248 KNEYIEALYTFYHEKR 263 (643)
Q Consensus 248 ~~~~l~~L~~~y~~~~ 263 (643)
+..|.++|+.|+...+
T Consensus 141 ~~~q~~~l~~~~~~~r 156 (159)
T 1rxd_A 141 NSKQLLYLEKYRPKMR 156 (159)
T ss_dssp CHHHHHHHHHCCCCCC
T ss_pred CHHHHHHHHHHHHHHH
Confidence 8999999988776544
No 23
>3rz2_A Protein tyrosine phosphatase type IVA 1; tyrosine phosphatase, dual specific phosphatase, COMP with peptide, hydrolase; 2.80A {Rattus norvegicus} PDB: 1x24_A 1zcl_A
Probab=99.81 E-value=1.9e-19 Score=175.67 Aligned_cols=144 Identities=19% Similarity=0.281 Sum_probs=120.5
Q ss_pred ccCceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCeeEEEEcCCCCCCCCcchhccCCcEEEEeeccCCCCCCC
Q 006472 100 IGGCIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPD 179 (643)
Q Consensus 100 I~~~flp~k~Pl~~~~~~~i~~~~~~~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~ 179 (643)
.+.+||++..|++.. ..+.++.++ ..+|++||+|+. ..|+++.+...||+|+.+|+.|. .+|+
T Consensus 35 ~~~r~I~tq~P~~~t------------~~~~~~~L~--~~gi~~Iv~l~~--~~~~~~~~~~~~i~~~~~pi~d~-~~~~ 97 (189)
T 3rz2_A 35 KNMRFLITHNPTNAT------------LNKFIEELK--KYGVTTIVRVCE--ATYDTTLVEKEGIHVLDWPFDDG-APPS 97 (189)
T ss_dssp TTEEEEEECCCCTTT------------HHHHHHHHH--TTTEEEEEECSC--CCSCCHHHHHSSCEEEECCCCSS-SCCC
T ss_pred CCCeEEEeCCCCccc------------HHHHHHHHH--HcCCcEEEEeCC--CcCCHHHHHHcCcEEEEecCCCC-CCCC
Confidence 347999999997743 344555554 367999999994 45788888889999999998884 7888
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHHHhcCCCHHHHHHHHHhcCCCccCCHHHHHHHHHHH
Q 006472 180 NASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFY 259 (643)
Q Consensus 180 ~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~li~aYLm~~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y 259 (643)
.+.+.+|++.+.+.+. ..++++|+|||.+|+||||++||+|||. .||++++|++.++++||.++ +..|+.+|+.|+
T Consensus 98 ~~~~~~~~~~i~~~~~--~~~~~~VlVHC~aG~gRSg~~va~~L~~-~g~~~~~a~~~vr~~R~~~v-~~~Q~~~l~~~~ 173 (189)
T 3rz2_A 98 NQIVDDWLSLVKIKFR--EEPGCCIAVHCVAGLGRAPVLVALALIE-GGMKYEDAVQFIRQKRRGAF-NSKQLLYLEKYR 173 (189)
T ss_dssp SHHHHHHHHHHHHHHH--HSTTCEEEEECSSSSTTHHHHHHHHHHT-TTCCHHHHHHHHHTTSSSCC-CHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHH--hCCCCcEEEECCCCCCHHHHHHHHHHHH-cCCCHHHHHHHHHHHCcCCC-CHHHHHHHHHHH
Confidence 8899999888877765 3578899999999999999999999995 79999999999999999988 799999998887
Q ss_pred hccCC
Q 006472 260 HEKRL 264 (643)
Q Consensus 260 ~~~~~ 264 (643)
..+..
T Consensus 174 ~~lrl 178 (189)
T 3rz2_A 174 PKMRL 178 (189)
T ss_dssp CCCCC
T ss_pred HHhcc
Confidence 76554
No 24
>2nt2_A Protein phosphatase slingshot homolog 2; alpha/beta hydrolase; 2.10A {Homo sapiens}
Probab=99.81 E-value=5.8e-20 Score=171.41 Aligned_cols=116 Identities=15% Similarity=0.240 Sum_probs=97.4
Q ss_pred CCeeEEEEcCCCCCCCCcchhccCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHH
Q 006472 139 RKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYM 218 (643)
Q Consensus 139 ~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~l 218 (643)
.+|++||||+.+.+.+ + ..|++|+++|+.|. ..++ +.+++..+.+||++....+++|+|||.+|+||||++
T Consensus 28 ~gi~~Vi~l~~~~~~~----~-~~~~~~~~ipi~D~-~~~~---l~~~~~~~~~fi~~~~~~~~~VlVHC~~G~~RS~~~ 98 (145)
T 2nt2_A 28 RGVRYILNVTREIDNF----F-PGVFEYHNIRVYDE-EATD---LLAYWNDTYKFISKAKKHGSKCLVHSKMGVSRSAST 98 (145)
T ss_dssp TTEEEEEECCSSSCCS----C-BTTBEEEECCCCSS-TTCC---CGGGHHHHHHHHHHHHHTTCEEEEECSSSSSHHHHH
T ss_pred CCCCEEEEeCCCCccC----C-CCCcEEEEEEEeCC-CCCc---HHHHHHHHHHHHHHHHHcCCeEEEECCCCCchHHHH
Confidence 5799999999765332 2 25899999999885 2222 334556677888877777899999999999999999
Q ss_pred HHHHHHHhcCCCHHHHHHHHHhcCCCccCCHHHHHHHHHHHhccC
Q 006472 219 IVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEKR 263 (643)
Q Consensus 219 i~aYLm~~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~~ 263 (643)
++||||...||++++|++.++++||.+.+|.+|+.+|..|+..+.
T Consensus 99 v~ayLm~~~~~~~~~A~~~v~~~R~~~~pn~~f~~qL~~~e~~l~ 143 (145)
T 2nt2_A 99 VIAYAMKEYGWNLDRAYDYVKERRTVTKPNPSFMRQLEEYQGILL 143 (145)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHCCCcCCCHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999887653
No 25
>2hxp_A Dual specificity protein phosphatase 9; human phosphatase, structural genomics, PSI-2, protein structure initiative; 1.83A {Homo sapiens} PDB: 3lj8_A 1mkp_A
Probab=99.81 E-value=1e-19 Score=171.96 Aligned_cols=118 Identities=17% Similarity=0.234 Sum_probs=99.9
Q ss_pred CCeeEEEEcCCCCCCCCcchhccCC-cEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHH
Q 006472 139 RKLGLVIDLTNTTRYYPTSDLKKEG-IKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGY 217 (643)
Q Consensus 139 ~~I~~VIdLt~~~~~y~~~~~~~~g-I~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~ 217 (643)
.+|++||||+.+.+ ..+...| |+|+++|+.|. ..| .+.+++..+.+||++....+++|+|||.+|+||||+
T Consensus 30 ~gI~~Vi~l~~~~~----~~~~~~~~i~~~~ipi~D~-~~~---~l~~~~~~~~~fi~~~~~~~~~VlVHC~~G~~RS~~ 101 (155)
T 2hxp_A 30 LGIRYILNVTPNLP----NFFEKNGDFHYKQIPISDH-WSQ---NLSRFFPEAIEFIDEALSQNCGVLVHSLAGVSRSVT 101 (155)
T ss_dssp TTEEEEEECSSSCC----CTTTTCTTCEEEECCCCGG-GGG---GHHHHHHHHHHHHHHHHHTTCEEEEECSSSSSHHHH
T ss_pred CCCCEEEEeCCCCc----ccccCCCCeEEEEEECccC-CCC---CHHHHHHHHHHHHHHHHHcCCcEEEECCCCCchhHH
Confidence 57999999997642 3345455 99999999885 333 344566777899987777789999999999999999
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHhcCCCccCCHHHHHHHHHHHhccCC
Q 006472 218 MIVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEKRL 264 (643)
Q Consensus 218 li~aYLm~~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~~~ 264 (643)
+++||||...||++++|++.++++||.+.+|.+|+.+|..|+.....
T Consensus 102 vv~ayLm~~~~~~~~~A~~~v~~~R~~~~pn~~f~~qL~~~e~~~~~ 148 (155)
T 2hxp_A 102 VTVAYLMQKLHLSLNDAYDLVKRKKSNISPNFNFMGQLLDFERSLRE 148 (155)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHCSCCCCCHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHCCCcCCCHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999887654
No 26
>1zzw_A Dual specificity protein phosphatase 10; MKP, PTP, hydrolase; 1.60A {Homo sapiens}
Probab=99.81 E-value=1.2e-19 Score=169.85 Aligned_cols=119 Identities=19% Similarity=0.361 Sum_probs=98.7
Q ss_pred CCeeEEEEcCCCCCCCCcchhccCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHH
Q 006472 139 RKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYM 218 (643)
Q Consensus 139 ~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~l 218 (643)
.+|++||||+.+.+.+. ....|++|+++|+.|. ..++ +...+..+.+||+.....+++|+|||++|+||||++
T Consensus 28 ~gi~~Vi~l~~e~p~~~---~~~~~~~~~~ipi~D~-~~~~---~~~~~~~~~~~i~~~~~~~~~VlVHC~~G~~RSg~~ 100 (149)
T 1zzw_A 28 LNIGYVINVTTHLPLYH---YEKGLFNYKRLPATDS-NKQN---LRQYFEEAFEFIEEAHQCGKGLLIHCQAGVSRSATI 100 (149)
T ss_dssp TTEEEEEECCSSSCCTT---GGGTCSEEEECCCCCS-SSCC---CHHHHHHHHHHHHHHHHTTCEEEEECSSSSSHHHHH
T ss_pred CCCcEEEEecCCCCCcc---cCCCCeEEEEEECCCC-Cccc---HHHHHHHHHHHHHHHHHcCCeEEEECCCCCCHHHHH
Confidence 57999999997644332 3457999999999985 3333 223445566788766667899999999999999999
Q ss_pred HHHHHHHhcCCCHHHHHHHHHhcCCCccCCHHHHHHHHHHHhccCC
Q 006472 219 IVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEKRL 264 (643)
Q Consensus 219 i~aYLm~~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~~~ 264 (643)
++||||...||++++|++.++++||.+.++.+|+++|..|+..+..
T Consensus 101 ~~ayl~~~~~~~~~~a~~~v~~~R~~~~pn~~f~~qL~~~e~~l~~ 146 (149)
T 1zzw_A 101 VIAYLMKHTRMTMTDAYKFVKGKRPIISPNLNFMGQLLEFEEDLNN 146 (149)
T ss_dssp HHHHHHHHSCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHCCccCCCHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999887653
No 27
>4erc_A Dual specificity protein phosphatase 23; alpha beta, phosphatase(hydrolase), hydrolase; 1.15A {Homo sapiens} PDB: 2img_A
Probab=99.80 E-value=6.6e-19 Score=164.40 Aligned_cols=116 Identities=22% Similarity=0.390 Sum_probs=98.6
Q ss_pred CCeeEEEEcCCCCCCCCcchhccCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHH
Q 006472 139 RKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYM 218 (643)
Q Consensus 139 ~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~l 218 (643)
.+|++||||+.+.+.+.. ...|++|+++|+.|. ..|+.+.+..+++.+ ++....+++|+|||.+|+||||++
T Consensus 34 ~gi~~Vi~l~~~~~~~~~---~~~~~~~~~~~~~d~-~~~~~~~~~~~~~~i----~~~~~~~~~vlVHC~~G~~Rsg~~ 105 (150)
T 4erc_A 34 LGVRHLVSLTERGPPHSD---SCPGLTLHRLRIPDF-CPPAPDQIDRFVQIV----DEANARGEAVGVHCALGFGRTGTM 105 (150)
T ss_dssp TTEEEEEECSSSCCTTGG---GCTTSEEEECCCCTT-SCCCHHHHHHHHHHH----HHHHHTTCEEEEECSSSSHHHHHH
T ss_pred CCCCEEEEcCCCCCCccc---ccCCceEEEEecCCC-CCCCHHHHHHHHHHH----HHHHHCCCCEEEECCCCCCHHHHH
Confidence 579999999977544322 336999999999997 678877777666544 433346789999999999999999
Q ss_pred HHHHHHHhcCCCHHHHHHHHHhcCCCccCCHHHHHHHHHHHhcc
Q 006472 219 IVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEK 262 (643)
Q Consensus 219 i~aYLm~~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~ 262 (643)
+++|||...||++++|++.+++.||.++++++|..+|++|+..+
T Consensus 106 ~a~~l~~~~~~~~~~a~~~vr~~R~~~~~~~~q~~~l~~~~~~l 149 (150)
T 4erc_A 106 LACYLVKERGLAAGDAIAEIRRLRPGSIETYEQEKAVFQFYQRT 149 (150)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHSTTCCCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHh
Confidence 99999998999999999999999999999999999999998764
No 28
>3f81_A Dual specificity protein phosphatase 3; hydrolase, protein dual-specificity phosphatase, inhibitor; HET: STT; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1vhr_A* 1j4x_A*
Probab=99.80 E-value=1.5e-19 Score=175.11 Aligned_cols=121 Identities=17% Similarity=0.292 Sum_probs=99.5
Q ss_pred CCeeEEEEcCCCCCCC----CcchhccCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccC-CCeEEEEcCCCCC
Q 006472 139 RKLGLVIDLTNTTRYY----PTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHS-KKYILVHCTHGHN 213 (643)
Q Consensus 139 ~~I~~VIdLt~~~~~y----~~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~-~~~VlVHC~~G~~ 213 (643)
.+|++||||+.+.... +++.+...||+|+++|+.|. ..++ +..++..+.+||++.... +++|+|||.+|+|
T Consensus 52 ~gI~~Vi~l~~~~~~~~~~~~~~~~~~~gi~~~~ip~~D~-~~~~---~~~~~~~~~~~i~~~~~~~~~~VlVHC~~G~~ 127 (183)
T 3f81_A 52 LGITHVLNAAEGRSFMHVNTNANFYKDSGITYLGIKANDT-QEFN---LSAYFERAADFIDQALAQKNGRVLVHCREGYS 127 (183)
T ss_dssp HTCCEEEETTBSSSTTSBCCCTGGGTTTTCEEEECCCCCS-TTSC---GGGGHHHHHHHHHHHHHSTTCCEEEECSSSSS
T ss_pred CCCcEEEECCCCccccccccchhhcccCCCEEEEEEcCCC-Cccc---HHHHHHHHHHHHHHHHHcCCCeEEEECCCCcc
Confidence 4799999999765422 34556678999999999986 3333 234455666777766555 8999999999999
Q ss_pred hhHHHHHHHHHHhcCCCHHHHHHHHHhcCCCccCCHHHHHHHHHHHhccCC
Q 006472 214 RTGYMIVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEKRL 264 (643)
Q Consensus 214 RSG~li~aYLm~~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~~~ 264 (643)
|||++++||||...||++++|++.++++|| +.+|.+|+++|..+...+..
T Consensus 128 RSg~~v~ayLm~~~~~~~~~A~~~v~~~R~-i~pn~~f~~qL~~~e~~L~~ 177 (183)
T 3f81_A 128 RSPTLVIAYLMMRQKMDVKSALSIVRQNRE-IGPNDGFLAQLCQLNDRLAK 177 (183)
T ss_dssp HHHHHHHHHHHHHHCCCHHHHHHHHHHHSC-CCCCHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhCCCHHHHHHHHHHcCC-CCCCHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999998 89999999999998776543
No 29
>2j16_A SDP-1, tyrosine-protein phosphatase YIL113W; hydrolase, hypothetical protein; 2.7A {Saccharomyces cerevisiae} PDB: 2j17_A* 2j16_B
Probab=99.80 E-value=1.4e-19 Score=175.93 Aligned_cols=116 Identities=11% Similarity=0.167 Sum_probs=95.5
Q ss_pred CCeeEEEEcCCCCCCCCcchhccCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHH
Q 006472 139 RKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYM 218 (643)
Q Consensus 139 ~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~l 218 (643)
.+|++|||++.+...+.. .+ .|++|+++|+.|. . .+..++..+.+||+++...|+.|+|||.+|+||||++
T Consensus 64 ~gIt~Vlnv~~e~~~~~~-~~--~~i~y~~ip~~d~--~----~i~~~~~~~~~fI~~~~~~g~~VLVHC~~G~sRS~tv 134 (182)
T 2j16_A 64 LPFDVVINVAEEANDLRM-QV--PAVEYHHYRWEHD--S----QIALDLPSLTSIIHAATTKREKILIHAQCGLSRSATL 134 (182)
T ss_dssp TTCSEEEECCSCC-----------CCEEEECCCSSG--G----GGGGGHHHHHHHHHHHHHTTCCEEEEESSCCSHHHHH
T ss_pred hCCCEEEEecCCCCCchh-cc--CCceEEEEecCCC--c----hHHHHHHHHHHHHHHHHhcCCeEEEECCCCCChHHHH
Confidence 479999999977654432 12 3899999999752 2 2445667778899887778999999999999999999
Q ss_pred HHHHHHHhcCCCHHHHHHHHHhcCCCccCCHHHHHHHHHHHhccC
Q 006472 219 IVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEKR 263 (643)
Q Consensus 219 i~aYLm~~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~~ 263 (643)
++||||...||++++|+++++++||.+.+|.+|+.||..|...+.
T Consensus 135 v~ayLm~~~~~s~~~A~~~v~~~Rp~i~pn~~f~~qL~~~e~~L~ 179 (182)
T 2j16_A 135 IIAYIMKYHNLSLRHSYDLLKSRADKINPSIGLIFQLMEWEVALN 179 (182)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999887653
No 30
>2e0t_A Dual specificity phosphatase 26; conserved hypothetical protein, structural genomics, NPPSFA, project on protein structural and functional analyses; 1.67A {Homo sapiens}
Probab=99.80 E-value=1.6e-19 Score=169.34 Aligned_cols=120 Identities=19% Similarity=0.329 Sum_probs=97.9
Q ss_pred CCeeEEEEcCCCCCCCCcchhccCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhccc-CCCeEEEEcCCCCChhHH
Q 006472 139 RKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKH-SKKYILVHCTHGHNRTGY 217 (643)
Q Consensus 139 ~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~-~~~~VlVHC~~G~~RSG~ 217 (643)
.+|++||||+.+.....++.++..|++|+++|+.|. |..+ +...+..+.+||++... .+++|+|||++|+||||+
T Consensus 26 ~gi~~Vi~l~~~~~~~~~~~~~~~~i~~~~ip~~d~---~~~~-l~~~~~~~~~~i~~~~~~~~~~vlVHC~aG~~RSg~ 101 (151)
T 2e0t_A 26 LGITHVLNASHSRWRGTPEAYEGLGIRYLGVEAHDS---PAFD-MSIHFQTAADFIHRALSQPGGKILVHCAVGVSRSAT 101 (151)
T ss_dssp HTCCEEEETTCCTTCCSCTTHHHHTCEEEECCCCSS---TTSC-THHHHHHHHHHHHHHHHSTTCCEEEECSSSSHHHHH
T ss_pred cCCCEEEEccCCcccCCccccCCCCeEEEEEecccC---CCcc-HHHHHHHHHHHHHHHHhcCCCcEEEECCCCCChHHH
Confidence 479999999976543345555567999999999874 2222 22344566788876655 689999999999999999
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHhcCCCccCCHHHHHHHHHHHhccC
Q 006472 218 MIVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEKR 263 (643)
Q Consensus 218 li~aYLm~~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~~ 263 (643)
+++||||...||++++|++.++++|| +.+|.+|+.||..|...+.
T Consensus 102 ~~~ayl~~~~~~~~~~a~~~v~~~R~-i~pn~~f~~qL~~~e~~l~ 146 (151)
T 2e0t_A 102 LVLAYLMLYHHLTLVEAIKKVKDHRG-IIPNRGFLRQLLALDRRLR 146 (151)
T ss_dssp HHHHHHHHHSCCCHHHHHHHHHHTSC-SCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHcCC-CCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999997 7899999999999887654
No 31
>2hcm_A Dual specificity protein phosphatase; structural genomics, PSI, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Mus musculus}
Probab=99.79 E-value=3.4e-19 Score=169.79 Aligned_cols=117 Identities=14% Similarity=0.235 Sum_probs=98.5
Q ss_pred CCeeEEEEcCCCCCCCCcchhccCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHH
Q 006472 139 RKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYM 218 (643)
Q Consensus 139 ~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~l 218 (643)
.+|++||||+.+.+.+ ...|++|+++|+.|.. .++ +..++..+.+||+.....+++|+|||++|+||||++
T Consensus 36 ~gI~~Vi~l~~~~~~~-----~~~~~~~~~ip~~D~~-~~~---~~~~~~~~~~~i~~~~~~~~~VlVHC~aG~~RSg~~ 106 (164)
T 2hcm_A 36 AGITLCVNVSRQQPGP-----RAPGVAELRVPVFDDP-AED---LLTHLEPTCAAMEAAVRDGGSCLVYCKNGRSRSAAV 106 (164)
T ss_dssp TTEEEEEECSSSCCCC-----CCTTCEEEECCCCSCT-TSC---CHHHHHHHHHHHHHHHHTTCEEEEEESSSSHHHHHH
T ss_pred CCCeEEEEcCCCCCCC-----CCCCCEEEEEeCcCCC-Cch---HHHHHHHHHHHHHHHHHcCCEEEEECCCCCchHHHH
Confidence 5799999999765432 1359999999998852 222 233455667888877667899999999999999999
Q ss_pred HHHHHHHhcCCCHHHHHHHHHhcCCCccCCHHHHHHHHHHHhccCC
Q 006472 219 IVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEKRL 264 (643)
Q Consensus 219 i~aYLm~~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~~~ 264 (643)
++||||...||++++|++.++++||.+.++.+|+++|..|+..+..
T Consensus 107 ~~ayLm~~~~~~~~~A~~~v~~~R~~~~pn~~f~~qL~~~e~~l~~ 152 (164)
T 2hcm_A 107 CTAYLMRHRGHSLDRAFQMVKSARPVAEPNLGFWAQLQKYEQTLQA 152 (164)
T ss_dssp HHHHHHHHSCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHCCCcCCCHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999887654
No 32
>2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual specicity protein phosphatase 23, DUS23_human, malate, structural genomics, PSI; 1.93A {Homo sapiens}
Probab=99.79 E-value=2.1e-18 Score=160.93 Aligned_cols=116 Identities=22% Similarity=0.399 Sum_probs=96.4
Q ss_pred CCeeEEEEcCCCCCCCCcchhccCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHH
Q 006472 139 RKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYM 218 (643)
Q Consensus 139 ~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~l 218 (643)
.+|++||||+.+.+. +...++ ++.|+++|+.|+ ..|+.+.+.++++.+.+. ...+++|+|||.+|+||||++
T Consensus 35 ~gi~~Vv~l~~~~e~-~~~~~~--~~~~~~~~~~d~-~~p~~~~~~~~~~~i~~~----~~~~~~vlVHC~aG~~Rsg~~ 106 (151)
T 2img_A 35 LGVRHLVSLTERGPP-HSDSCP--GLTLHRLRIPDF-CPPAPDQIDRFVQIVDEA----NARGEAVGVHCALGFGRTGTM 106 (151)
T ss_dssp TTEEEEEECSSSCCT-TGGGCT--TSEEEECCCCTT-CCCCHHHHHHHHHHHHHH----HHTTCEEEEECSSSSSHHHHH
T ss_pred CCCCEEEECCCCCCC-CHHHHh--hCCeEEEeCCCC-CCCCHHHHHHHHHHHHHH----HhCCCcEEEECCCCCChHHHH
Confidence 579999999976543 333343 677999999996 678776666665544443 346789999999999999999
Q ss_pred HHHHHHHhcCCCHHHHHHHHHhcCCCccCCHHHHHHHHHHHhcc
Q 006472 219 IVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEK 262 (643)
Q Consensus 219 i~aYLm~~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~ 262 (643)
+|+|||...||++++|++.++++||.++++++|.++|+.++..+
T Consensus 107 ~~~~l~~~~~~~~~~a~~~~r~~R~~~~~~~~q~~~l~~~~~~L 150 (151)
T 2img_A 107 LACYLVKERGLAAGDAIAEIRRLRPGSIETYEQEKAVFQFYQRT 150 (151)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHSTTCSCSHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhCcCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHh
Confidence 99999998899999999999999999999999999999998764
No 33
>2g6z_A Dual specificity protein phosphatase 5; alpha/beta, hydrolase; 2.70A {Homo sapiens}
Probab=99.79 E-value=3.9e-19 Score=176.59 Aligned_cols=118 Identities=14% Similarity=0.198 Sum_probs=99.4
Q ss_pred CCeeEEEEcCCCCCCCCcchhccCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHH
Q 006472 139 RKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYM 218 (643)
Q Consensus 139 ~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~l 218 (643)
.+|++||||+.+.+. .+ ..||+|+++|+.|. ..|+. .+++..+.+||++....+++|||||.+|+||||++
T Consensus 30 ~GIt~VInl~~e~~~----~~-~~gi~y~~ipi~D~-~~~~l---~~~~~~~~~fI~~~~~~~~~VLVHC~aG~sRSgtv 100 (211)
T 2g6z_A 30 LHITALLNVSRRTSE----AC-MTHLHYKWIPVEDS-HTADI---SSHFQEAIDFIDCVREKGGKVLVHSEAGISRSPTI 100 (211)
T ss_dssp HTCCEEEECSSCCCC----TT-CTTSEEEECCCCSS-TTSCC---GGGHHHHHHHHHHHHHTTCCEEEEESSSSSHHHHH
T ss_pred CCCCEEEEcCCCCcc----cc-ccCCEEEEeeCCCC-CCCCH---HHHHHHHHHHHHHHHhcCCeEEEECCCCCCcHHHH
Confidence 479999999976432 22 26999999999986 33432 23455666888876667899999999999999999
Q ss_pred HHHHHHHhcCCCHHHHHHHHHhcCCCccCCHHHHHHHHHHHhccCCC
Q 006472 219 IVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEKRLD 265 (643)
Q Consensus 219 i~aYLm~~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~~~~ 265 (643)
++||||...||++++|+++++++||.+.+|.+|+++|..|+..+..+
T Consensus 101 v~AYLm~~~g~s~~eAl~~vr~~Rp~i~pN~~f~~qL~~~e~~l~~~ 147 (211)
T 2g6z_A 101 CMAYLMKTKQFRLKEAFDYIKQRRSMVSPNFGFMGQLLQYESEILPS 147 (211)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHCCCcCCCHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999988764
No 34
>2esb_A Dual specificity protein phosphatase 18; alpha/beta structure, hydrolase; HET: EPE; 2.00A {Homo sapiens}
Probab=99.78 E-value=6.6e-19 Score=171.89 Aligned_cols=117 Identities=16% Similarity=0.246 Sum_probs=97.8
Q ss_pred CCeeEEEEcCCCCCCCCcchhccCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHH
Q 006472 139 RKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYM 218 (643)
Q Consensus 139 ~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~l 218 (643)
.+|++||||+.+.+... ..||+|+++|+.|.. .++ +...+..+.+||+++...+++|+|||.+|+||||++
T Consensus 44 ~gIt~Vi~l~~~~~~~~-----~~~i~~~~ipi~D~~-~~~---~~~~~~~~~~fI~~~~~~~~~VLVHC~aG~sRS~~v 114 (188)
T 2esb_A 44 NQITMVINVSVEVVNTL-----YEDIQYMQVPVADSP-NSR---LCDFFDPIADHIHSVEMKQGRTLLHCAAGVSRSAAL 114 (188)
T ss_dssp TTCCEEEECCSSCCCCC-----CTTCEEEECCCCSCT-TSC---GGGGHHHHHHHHHHHHHTTCCEEEECSSSSSHHHHH
T ss_pred CCCcEEEEecCCCCCcC-----CCCCEEEEEeCcCCC-Ccc---HHHHHHHHHHHHHHHHHcCCEEEEECCCCCchHHHH
Confidence 57999999997543221 259999999998852 222 233456677888877667899999999999999999
Q ss_pred HHHHHHHhcCCCHHHHHHHHHhcCCCccCCHHHHHHHHHHHhccCC
Q 006472 219 IVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEKRL 264 (643)
Q Consensus 219 i~aYLm~~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~~~ 264 (643)
++||||...||++++|+++++++||.+.+|.+|+++|..|+..+..
T Consensus 115 v~ayLm~~~~~s~~~A~~~v~~~Rp~~~pn~~f~~qL~~~e~~l~~ 160 (188)
T 2esb_A 115 CLAYLMKYHAMSLLDAHTWTKSCRPIIRPNSGFWEQLIHYEFQLFG 160 (188)
T ss_dssp HHHHHHHHSCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHCCccCCCHHHHHHHHHHHHHHcc
Confidence 9999999999999999999999999999999999999999887654
No 35
>2r0b_A Serine/threonine/tyrosine-interacting protein; structural genomics, phosphatase, PSI-2, protein structure initiative; 1.60A {Homo sapiens}
Probab=99.78 E-value=6.5e-19 Score=165.75 Aligned_cols=119 Identities=13% Similarity=0.204 Sum_probs=96.0
Q ss_pred CCeeEEEEcCCCCCC-CCcchhccCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHH
Q 006472 139 RKLGLVIDLTNTTRY-YPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGY 217 (643)
Q Consensus 139 ~~I~~VIdLt~~~~~-y~~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~ 217 (643)
.+|++||||+.+.+. +....+ ..|++|+++|+.|. |.. .+..++..+.+||+.....+++|+|||++|+||||+
T Consensus 32 ~gI~~Vi~l~~~~e~~~~~~~~-~~~~~~~~ip~~d~---~~~-~l~~~~~~~~~~i~~~~~~~~~vlvHC~aG~~RS~~ 106 (154)
T 2r0b_A 32 HGITHIICIRQNIEANFIKPNF-QQLFRYLVLDIADN---PVE-NIIRFFPMTKEFIDGSLQMGGKVLVHGNAGISRSAA 106 (154)
T ss_dssp TTCCEEEEEECGGGTTTSSCCC-TTTSEEEEEECCSS---TTS-CCGGGHHHHHHHHHHHHHTTCCEEEECSSSSSHHHH
T ss_pred cCCeEEEEeCCccccccCCCCC-cCceeEEEEECCCC---Ccc-cHHHHHHHHHHHHHHHHhcCCCEEEEcCCCCChHHH
Confidence 579999999865421 211122 25899999999874 222 233345667788887666789999999999999999
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHhcCCCccCCHHHHHHHHHHHhcc
Q 006472 218 MIVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEK 262 (643)
Q Consensus 218 li~aYLm~~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~ 262 (643)
++++|||...||++++|++.++++||.+.+|.+|+++|..|...+
T Consensus 107 ~~~ayl~~~~~~~~~~a~~~v~~~R~~~~pn~~f~~qL~~~e~~l 151 (154)
T 2r0b_A 107 FVIAYIMETFGMKYRDAFAYVQERRFCINPNAGFVHQLQEYEAIY 151 (154)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHSTTCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHCCccCCCHHHHHHHHHHHHHh
Confidence 999999998999999999999999999999999999999887653
No 36
>1wrm_A Dual specificity phosphatase 22; DSP, JNK, hydrolase; HET: MES; 1.50A {Homo sapiens}
Probab=99.77 E-value=1e-18 Score=166.77 Aligned_cols=115 Identities=17% Similarity=0.280 Sum_probs=95.5
Q ss_pred CCeeEEEEcCCCCCCCCcchhccCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHH
Q 006472 139 RKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYM 218 (643)
Q Consensus 139 ~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~l 218 (643)
.+|++||||+.+... ...|++|+++|+.|. ..++ +..++..+.+||++....+++|+|||++|+||||++
T Consensus 31 ~gI~~Vi~l~~~~~~------~~~~i~~~~ip~~D~-~~~~---l~~~~~~~~~fi~~~~~~~~~VlVHC~aG~~RSg~~ 100 (165)
T 1wrm_A 31 NKVTHILSVHDSARP------MLEGVKYLCIPAADS-PSQN---LTRHFKESIKFIHECRLRGESCLVHCLAGVSRSVTL 100 (165)
T ss_dssp TTEEEEEECSTTCCC------CSTTCEEEECCCCSS-TTSC---CGGGHHHHHHHHHHHHHTTCEEEEECSSSSSHHHHH
T ss_pred CCCcEEEEecCCCCC------CCCCCeEEEEECCCC-CCcc---HHHHHHHHHHHHHHHHHCCCeEEEECCCCCChhHHH
Confidence 579999999965422 136999999999885 2222 223345566788776667899999999999999999
Q ss_pred HHHHHHHhcCCCHHHHHHHHHhcCCCccCCHHHHHHHHHHHhccC
Q 006472 219 IVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEKR 263 (643)
Q Consensus 219 i~aYLm~~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~~ 263 (643)
++||||...||++++|++.++++||.+.++.+|+++|..|+..+.
T Consensus 101 ~~ayLm~~~~~~~~~A~~~v~~~R~~~~pn~~f~~qL~~~e~~l~ 145 (165)
T 1wrm_A 101 VIAYIMTVTDFGWEDALHTVRAGRSCANPNVGFQRQLQEFEKHEV 145 (165)
T ss_dssp HHHHHHHTSSCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHHHHTH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHCCCcCCCHhHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999887653
No 37
>3v0d_A Voltage-sensor containing phosphatase; PTP, hydrolase; HET: PO4; 1.10A {Ciona intestinalis} PDB: 3v0f_A* 3v0g_A 3v0h_A* 3awf_A 3v0j_A 3awe_A 3awg_A 3v0e_A 3v0i_A
Probab=99.77 E-value=2.9e-18 Score=181.53 Aligned_cols=151 Identities=17% Similarity=0.265 Sum_probs=128.4
Q ss_pred ccCceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCeeEEEEcCCCCCCCCcchhccCCcEEEEeeccCCCCCCC
Q 006472 100 IGGCIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPD 179 (643)
Q Consensus 100 I~~~flp~k~Pl~~~~~~~i~~~~~~~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~ 179 (643)
|+.+||+|..|.+. ....+|.+.++++..+++++.+...|+||+++ +.|+++.|. .+++++|++|+ .+|+
T Consensus 30 IT~riIam~~P~~~-----~e~~yRn~i~dv~~~L~~~h~~~y~V~NL~sE-~~Yd~~~f~---~~v~~~p~pD~-~~P~ 99 (339)
T 3v0d_A 30 VTDHVIAMSFPSSG-----RQSLFRNPIGEVSRFFKTKHPDKFRIYNLCSE-RGYDETKFD---NHVYRVMIDDH-NVPT 99 (339)
T ss_dssp EETTEEEECCEESS-----SCCTTSEEHHHHHHHHHHHSTTCEEEEEEETT-CCCCGGGGT---TCEEEEEECTT-SCCC
T ss_pred EecCEEEEECCCCC-----chhhccCCHHHHHHHHHHhCCCceEEEECCCC-CCCChHHcC---CeEEEeccCCC-CCCC
Confidence 78899999999654 23456778999999999988889999999865 689988875 35788999997 6889
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHHHhcCC-CHHHHHHHHHhcCC--------CccCCHH
Q 006472 180 NASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRSQSM-SVAQAIKKFAEVRP--------PGIYKNE 250 (643)
Q Consensus 180 ~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~li~aYLm~~~g~-s~~eAi~~~~~~Rp--------~~i~~~~ 250 (643)
.+.+..|+..+..++. ..+++.|+|||++|.||||++||||||...++ ++++|++.|+.+|+ .++..+.
T Consensus 100 ~~~l~~~~~~v~~~l~--~~~~~~v~vHC~~G~gRtg~~ia~~Li~~~~~~~~~~Al~~~~~~R~~~~~~~~~~~v~~ps 177 (339)
T 3v0d_A 100 LVDLLKFIDDAKVWMT--SDPDHVIAIHSKGGKGRTGTLVSSWLLEDGKFDTAKEALEYFGSRRTDFEVGDVFQGVETAS 177 (339)
T ss_dssp HHHHHHHHHHHHHHHH--TCTTCEEEEECSSSSHHHHHHHHHHHHHTTSCSSHHHHHHHHHHHHSSCCTTSCCCCC-CHH
T ss_pred HHHHHHHHHHHHHHHh--cCCCCeEEEEeCCCCcchHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCccccccccccCCHH
Confidence 9999999999999998 44668999999999999999999999998777 89999999999998 4788999
Q ss_pred HHHHHHHHHhcc
Q 006472 251 YIEALYTFYHEK 262 (643)
Q Consensus 251 ~l~~L~~~y~~~ 262 (643)
|.+.+..+..-+
T Consensus 178 Q~Ryv~yf~~~l 189 (339)
T 3v0d_A 178 QIRYVGYFEKIK 189 (339)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999986655543
No 38
>3n0a_A Tyrosine-protein phosphatase auxilin; phosphatase-like domain, C2 domain, hydrolase; 2.20A {Bos taurus}
Probab=99.77 E-value=3.8e-18 Score=181.67 Aligned_cols=152 Identities=15% Similarity=0.154 Sum_probs=122.6
Q ss_pred ccCceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCeeEEEEcCCCCCCCCcchhccCCcEEEEeeccCCCCCCC
Q 006472 100 IGGCIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPD 179 (643)
Q Consensus 100 I~~~flp~k~Pl~~~~~~~i~~~~~~~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~ 179 (643)
|+.+||+|..|.... ...+|.+.+++...+++++.+...|+||+ .+.|+++.|.. +++++|++|+ .+|+
T Consensus 27 IT~riIam~~P~~~~-----e~~yrn~i~~v~~~L~~~H~~~y~V~NLs--e~~Yd~~~f~~---~V~~~~~pD~-~~P~ 95 (361)
T 3n0a_A 27 VTSRIIVMSFPLDSV-----DIGFRNQVDDIRSFLDSRHLDHYTVYNLS--PKSYRTAKFHS---RVSECSWPIR-QAPS 95 (361)
T ss_dssp SSSSEEEEEC-----------------CHHHHHHHHHHHTTCEEEEECS--SSCCGGGSCGG---GEEECCCCSS-SCCC
T ss_pred EcCCEEEEECCCCCc-----hhhhcCCHHHHHHHHHHhCCCeEEEEECC--CCCCChhhcCC---cEEEeecCCC-CCCC
Confidence 788999999997652 23455667899999998877899999997 56898888864 4778999997 6889
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHHHhcCC-CHHHHHHHHHhcCCCccCCHHHHHHHHHH
Q 006472 180 NASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRSQSM-SVAQAIKKFAEVRPPGIYKNEYIEALYTF 258 (643)
Q Consensus 180 ~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~li~aYLm~~~g~-s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~ 258 (643)
.+.+..|+..+.+++. ..+++.|+|||++|.||||++||||||....+ ++++|++.|+++|+.+...+.|++.|.-+
T Consensus 96 l~~l~~~~~~i~~~l~--~~~~~~v~VHC~aG~GRtg~~ia~~Li~~~~~~~~~eAl~~~~~~R~~~~~~psQ~ryv~yf 173 (361)
T 3n0a_A 96 LHNLFAVCRNMYNWLL--QNPKNVCVVHCLDGRAASSILVGAMFIFCNLYSTPGPAVRLLYAKRPGIGLSPSHRRYLGYM 173 (361)
T ss_dssp HHHHHHHHHHHHHHHH--HCTTCEEEEEECSCTHHHHHHHHHHHHHTTSCSSHHHHHHHHHHHSTTCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh--cCCCCeEEEEeCCCCccHHHHHHHHHHHhcCCCCHHHHHHHHHHhCCCCCCCHHHHHHHHHH
Confidence 9999999999999998 35678999999999999999999999997666 99999999999999988999999999666
Q ss_pred HhccCC
Q 006472 259 YHEKRL 264 (643)
Q Consensus 259 y~~~~~ 264 (643)
..-+..
T Consensus 174 ~~ll~~ 179 (361)
T 3n0a_A 174 CDLLAD 179 (361)
T ss_dssp HHHHSS
T ss_pred HHHHhc
Confidence 555443
No 39
>2y96_A Dual specificity phosphatase DUPD1; hydrolase; 2.38A {Homo sapiens}
Probab=99.76 E-value=1.1e-18 Score=174.39 Aligned_cols=121 Identities=18% Similarity=0.321 Sum_probs=97.9
Q ss_pred CCeeEEEEcCCCCCCC--CcchhccCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcc-cCCCeEEEEcCCCCChh
Q 006472 139 RKLGLVIDLTNTTRYY--PTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQK-HSKKYILVHCTHGHNRT 215 (643)
Q Consensus 139 ~~I~~VIdLt~~~~~y--~~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~-~~~~~VlVHC~~G~~RS 215 (643)
.+|++||||+.+.... .+..+...||+|+++|+.|. ..++ +..++..+.+||+++. ..+++|||||.+|+|||
T Consensus 78 ~gIt~VInl~~~~~~~~~~~~~~~~~~i~y~~ipi~D~-~~~~---l~~~~~~~~~fI~~~l~~~~~~VLVHC~aG~sRS 153 (219)
T 2y96_A 78 AGFTHVLNAAHGRWNVDTGPDYYRDMDIQYHGVEADDL-PTFD---LSVFFYPAAAFIDRALSDDHSKILVHCVMGRSRS 153 (219)
T ss_dssp TTCCEEEETTBSTTSBCCHHHHTTTSCCEEEECCCCSS-TTSC---GGGGHHHHHHHHHHHHTSTTCCEEEECSSSSSHH
T ss_pred CCCeEEEECCCCccccccchhhhcccCcEEEEEECCCC-Cchh---HHHHHHHHHHHHHHHHHccCCeEEEECCCCCCHH
Confidence 5799999999653211 23344567999999999884 2222 3344566678888776 57899999999999999
Q ss_pred HHHHHHHHHHhcCCCHHHHHHHHHhcCCCccCCHHHHHHHHHHHhccCC
Q 006472 216 GYMIVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEKRL 264 (643)
Q Consensus 216 G~li~aYLm~~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~~~ 264 (643)
|++|+||||...||++++|+++++++|+ +.+|.+|+.+|..|+..+..
T Consensus 154 ~tvv~aYLm~~~~~s~~eAl~~vr~~R~-i~pn~~f~~qL~~~e~~L~~ 201 (219)
T 2y96_A 154 ATLVLAYLMIHKDMTLVDAIQQVAKNRC-VLPNRGFLKQLRELDKQLVQ 201 (219)
T ss_dssp HHHHHHHHHHHSCCCHHHHHHHHHTTSC-CCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHhCC-CCCCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999996 78999999999998887643
No 40
>1yz4_A DUSP15, dual specificity phosphatase-like 15 isoform A; hydrolase; HET: BOG; 2.40A {Homo sapiens}
Probab=99.76 E-value=1.9e-18 Score=163.93 Aligned_cols=114 Identities=15% Similarity=0.243 Sum_probs=94.3
Q ss_pred CCeeEEEEcCCCCCCCCcchhccCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHH
Q 006472 139 RKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYM 218 (643)
Q Consensus 139 ~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~l 218 (643)
.+|++||||+.+... + ..|++|+++|+.|. ..|+ +...+..+.+||+.....+++|+|||++|+||||++
T Consensus 32 ~gI~~Vi~l~~~~~~-----~-~~~i~~~~ipi~D~-~~~~---~~~~~~~~~~~i~~~~~~~~~VlVHC~aG~~RSg~~ 101 (160)
T 1yz4_A 32 NKITHIISIHESPQP-----L-LQDITYLRIPVADT-PEVP---IKKHFKECINFIHCCRLNGGNCLVHSFAGISRSTTI 101 (160)
T ss_dssp TTCCEEEEECSSCCC-----C-CTTCEEEEECCCSC-TTSC---GGGGHHHHHHHHHHHHHTTCCEEEEETTSSSHHHHH
T ss_pred CCCeEEEEccCCCCC-----c-cCCCeEEEEECCCC-CCcc---HHHHHHHHHHHHHHHHHcCCeEEEECCCCCchHHHH
Confidence 579999999965321 1 35999999999986 3333 223345566787766667899999999999999999
Q ss_pred HHHHHHHhcCCCHHHHHHHHHhcCCCccCCHHHHHHHHHHHhcc
Q 006472 219 IVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEK 262 (643)
Q Consensus 219 i~aYLm~~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~ 262 (643)
++||||...||++++|++.++++||.+.+|.+|+++|..|+...
T Consensus 102 ~~aylm~~~~~~~~~a~~~v~~~R~~~~pn~~f~~qL~~~e~~~ 145 (160)
T 1yz4_A 102 VTAYVMTVTGLGWRDVLEAIKATRPIANPNPGFRQQLEEFGWAS 145 (160)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHTCTTCCCCHHHHHHHHHHHHTH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHCCCcCCCHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999998887754
No 41
>2wgp_A Dual specificity protein phosphatase 14; MKP6, DUSP14, hydrolase, dual specifici phosphatase; 1.88A {Homo sapiens}
Probab=99.75 E-value=3.7e-18 Score=166.87 Aligned_cols=117 Identities=15% Similarity=0.181 Sum_probs=97.4
Q ss_pred CCeeEEEEcCCCCCCCCcchhccCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHH
Q 006472 139 RKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYM 218 (643)
Q Consensus 139 ~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~l 218 (643)
.+|++||||+.+.+... ..|++|+++|+.|. ..|+. ..++..+.+||+.....+++|+|||.+|+||||++
T Consensus 50 ~gI~~Vi~l~~~~~~~~-----~~gi~y~~ipi~D~-~~~~l---~~~~~~~~~fi~~~~~~~~~VlVHC~aG~~RSgtv 120 (190)
T 2wgp_A 50 RGITCIVNATIEIPNFN-----WPQFEYVKVPLADM-PHAPI---GLYFDTVADKIHSVSRKHGATLVHCAAGVSRSATL 120 (190)
T ss_dssp TTCCEEEECCSSSCCCC-----CTTSEEEECCCCSS-TTSCG---GGGHHHHHHHHHHHHHTTCCEEEECSSSSSHHHHH
T ss_pred CCCcEEEEecCCCCCCC-----CCCCEEEEEEcccC-CCCCH---HHHHHHHHHHHHHHHhcCCCEEEECCCCCCHHHHH
Confidence 57999999997543221 24899999999985 34442 23445566888766667899999999999999999
Q ss_pred HHHHHHHhcCCCHHHHHHHHHhcCCCccCCHHHHHHHHHHHhccCC
Q 006472 219 IVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEKRL 264 (643)
Q Consensus 219 i~aYLm~~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~~~ 264 (643)
++||||...||++++|++.++++||.+.++.+|+++|..|+..+..
T Consensus 121 v~ayLm~~~~~s~~~A~~~v~~~R~~~~pn~~f~~qL~~~e~~l~~ 166 (190)
T 2wgp_A 121 CIAYLMKFHNVCLLEAYNWVKARRPVIRPNVGFWRQLIDYERQLFG 166 (190)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHCCCcCCCHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999887654
No 42
>3cm3_A Late protein H1, dual specificity protein phosphatase; dual-specificity phosphatase, VH1, hydrolase; 1.32A {Vaccinia virus} PDB: 2rf6_A 2p4d_A
Probab=99.75 E-value=1.6e-18 Score=167.25 Aligned_cols=114 Identities=23% Similarity=0.371 Sum_probs=94.8
Q ss_pred CCe--eEEEEcCCCCCCCCcchhccCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhH
Q 006472 139 RKL--GLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTG 216 (643)
Q Consensus 139 ~~I--~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG 216 (643)
.+| ++||||+.+...+. ..|++|+++|+.|.. .++ +..++..+.+||+++...+++|+|||.+|+||||
T Consensus 53 ~gI~~~~Ii~l~~~~~~~~-----~~~~~~~~~p~~d~~-~~~---l~~~~~~~~~~i~~~~~~~~~VlVHC~aG~~RSg 123 (176)
T 3cm3_A 53 SEVKFKYVLNLTMDKYTLP-----NSNINIIHIPLVDDT-TTD---ISKYFDDVTAFLSKCDQRNEPVLVHSAAGVNRSG 123 (176)
T ss_dssp SSSCCSEEEECSSSCCCCT-----TSCCEEEECCCCCSS-SCC---CGGGHHHHHHHHHHHHHHTCCEEEECSSSSSHHH
T ss_pred cCCCCCEEEEecCCCCCcC-----CCCCEEEEEECCCCC-ccc---HHHHHHHHHHHHHHHHHCCCcEEEECCcCCCHHH
Confidence 679 99999997654432 369999999998852 232 2233455667777666668999999999999999
Q ss_pred HHHHHHHHHhcCCC-----HHHHHHHHHhcCCCccCCHHHHHHHHHHHhc
Q 006472 217 YMIVHFLMRSQSMS-----VAQAIKKFAEVRPPGIYKNEYIEALYTFYHE 261 (643)
Q Consensus 217 ~li~aYLm~~~g~s-----~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~ 261 (643)
++++||||...+|+ +.+|++.++++||.+.++.+|+++|.+|+..
T Consensus 124 ~~v~aylm~~~~~~~~~v~~~~A~~~vr~~R~~~~pn~~f~~qL~~~~~~ 173 (176)
T 3cm3_A 124 AMILAYLMSKNKESLPMLYFLYVYHSMRDLRGAFVENPSFKRQIIEKYVI 173 (176)
T ss_dssp HHHHHHHHHHCCSSCHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhCCCCccccHHHHHHHHHHHCCCCCCCHHHHHHHHHHHhc
Confidence 99999999999999 9999999999999999999999999988763
No 43
>2pq5_A Dual specificity protein phosphatase 13; hydrolase, dual specificity phosphatase, DUSP13, testis and skeletal muscle specific DSP; 2.30A {Homo sapiens} PDB: 2gwo_A
Probab=99.75 E-value=2.5e-18 Score=170.16 Aligned_cols=121 Identities=15% Similarity=0.230 Sum_probs=98.0
Q ss_pred CCeeEEEEcCCCCCCCC--cchhccCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhccc-CCCeEEEEcCCCCChh
Q 006472 139 RKLGLVIDLTNTTRYYP--TSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKH-SKKYILVHCTHGHNRT 215 (643)
Q Consensus 139 ~~I~~VIdLt~~~~~y~--~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~-~~~~VlVHC~~G~~RS 215 (643)
.+|++||||+.+....+ ...++..||+|+.+|+.|. |..+.+. .+..+.+||+++.. .+++|+|||.+|+|||
T Consensus 70 ~gIt~Vinl~~~~~~~~~~~~~~~~~~i~y~~ipi~D~---p~~dl~~-~f~~~~~fI~~~l~~~~~~VLVHC~aG~sRS 145 (205)
T 2pq5_A 70 LGITHVVNAAAGKFQVDTGAKFYRGMSLEYYGIEADDN---PFFDLSV-YFLPVARYIRAALSVPQGRVLVHCAMGVSRS 145 (205)
T ss_dssp HTCCEEEETBCSTTSCCCHHHHTTTSSCEEEECBCCCC---TTSCGGG-GHHHHHHHHHHHHTSTTCCEEEECSSSSSHH
T ss_pred cCCeEEEEeCCCcccCCcchhhhccCCceEEeeecCCC---CcchHHH-HHHHHHHHHHHHHhcCCCeEEEECCCCCcHH
Confidence 47999999996542222 2334567999999999873 4433333 34556688887654 6889999999999999
Q ss_pred HHHHHHHHHHhcCCCHHHHHHHHHhcCCCccCCHHHHHHHHHHHhccCC
Q 006472 216 GYMIVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEKRL 264 (643)
Q Consensus 216 G~li~aYLm~~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~~~ 264 (643)
|++|+||||...||++++|++.++++|| +.+|.+|++||..++..+..
T Consensus 146 ~tvv~aYLm~~~~~s~~~A~~~vr~~R~-i~pn~gf~~qL~~~e~~l~~ 193 (205)
T 2pq5_A 146 ATLVLAFLMIYENMTLVEAIQTVQAHRN-ICPNSGFLRQLQVLDNRLGR 193 (205)
T ss_dssp HHHHHHHHHHHSCCCHHHHHHHHTTTSC-CCCCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHcCC-CCCCHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999998 68999999999999887665
No 44
>1d5r_A Phosphoinositide phosphotase PTEN; C2 domain, phosphotidylinositol, hydrolase; HET: TLA; 2.10A {Homo sapiens} SCOP: b.7.1.1 c.45.1.1
Probab=99.74 E-value=2.5e-17 Score=174.10 Aligned_cols=153 Identities=20% Similarity=0.312 Sum_probs=127.1
Q ss_pred ccCceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCeeEEEEcCCCCCCCCcchhccCCcEEEEeeccCCCCCCC
Q 006472 100 IGGCIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPD 179 (643)
Q Consensus 100 I~~~flp~k~Pl~~~~~~~i~~~~~~~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~ 179 (643)
|+.+|++|..|.. .++...+.+.++++..++..+.+...|+||+++ +.|+++.+ +++++++|++|+ .+|+
T Consensus 22 It~~li~~~~P~~-----~~e~l~r~~i~~Vv~~l~~~~~~~~~v~nl~~e-~~y~~~~~---~~~~~~~~~~D~-~~P~ 91 (324)
T 1d5r_A 22 IYPNIIAMGFPAE-----RLEGVYRNNIDDVVRFLDSKHKNHYKIYNLCAE-RHYDTAKF---NCRVAQYPFEDH-NPPQ 91 (324)
T ss_dssp EETTEEEECCCBS-----SCCTTCCCBHHHHHHHHHHHSSSCEEEEEEESS-CCCCTTSC---SSCEEEEEECTT-SCCC
T ss_pred EcCcEEEEeCCCC-----cchhhhccCHHHHHHHHHhcCCCcEEEEEcCCC-CCCChHHh---CCeEEEEeecCC-CCCc
Confidence 5678999999953 234456788999999998887889999999864 46776554 567999999997 6788
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHHHhcCC-CHHHHHHHHHhcC---CCccCCHHHHHHH
Q 006472 180 NASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRSQSM-SVAQAIKKFAEVR---PPGIYKNEYIEAL 255 (643)
Q Consensus 180 ~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~li~aYLm~~~g~-s~~eAi~~~~~~R---p~~i~~~~~l~~L 255 (643)
.+.+..|+..+.+++. ..++++|+|||++|+||||++||||||..+++ ++++|++.|+.+| |+++.++.|.+.|
T Consensus 92 ~~~l~~~~~~i~~~l~--~~~~~~VlVHC~aG~gRTGt~ia~yL~~~~~~~~~~eal~~~~~~R~~r~~~v~~~~Q~~yl 169 (324)
T 1d5r_A 92 LELIKPFCEDLDQWLS--EDDNHVAAIHCKAGKGRTGVMICAYLLHRGKFLKAQEALDFYGEVRTRDKKGVTIPSQRRYV 169 (324)
T ss_dssp HHHHHHHHHHHHHHHT--TTSCSEEEEECSSSSHHHHHHHHHHHHHHTSCSSHHHHHHHHHHHHCSSSCSSCSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH--hcCCCeEEEECCCCCChhHHHHHHHHHHhcCCCCHHHHHHHHHHhhccCCCCCCCHHHHHHH
Confidence 8999999999999987 34678999999999999999999999998875 9999999988776 5789999999999
Q ss_pred HHHHhccCC
Q 006472 256 YTFYHEKRL 264 (643)
Q Consensus 256 ~~~y~~~~~ 264 (643)
+.+...+..
T Consensus 170 ~~~~~~l~~ 178 (324)
T 1d5r_A 170 YYYSYLLKN 178 (324)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhc
Confidence 877665443
No 45
>1fpz_A Cyclin-dependent kinase inhibitor 3; alpha-beta sandwich, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.1 PDB: 1fq1_A*
Probab=99.72 E-value=2.5e-17 Score=163.47 Aligned_cols=129 Identities=19% Similarity=0.201 Sum_probs=101.7
Q ss_pred HHHHHHHHcCCCeeEEEEcCCCCC--CCC----cchhccCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCC
Q 006472 129 QVIHQLRVLGRKLGLVIDLTNTTR--YYP----TSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKK 202 (643)
Q Consensus 129 ~l~~~~~~~~~~I~~VIdLt~~~~--~y~----~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~ 202 (643)
+-++.++. .+|++||||+.+.+ .|. ++.+...||+|+++|+.|+ ..|+.+.+..++..+... ...++
T Consensus 62 ~d~~~L~~--~gi~~Vv~l~~~~E~~~~~~~~~~~~~~~~gi~~~~~pi~d~-~~p~~~~~~~~~~~i~~~----~~~~~ 134 (212)
T 1fpz_A 62 KDTEELKS--CGIQDIFVFCTRGELSKYRVPNLLDLYQQCGIITHHHPIADG-GTPDIASCCEIMEELTTC----LKNYR 134 (212)
T ss_dssp HHHHHHHH--HTCCEEEECCCHHHHHHTTCTTHHHHHHHTTCEEEECCCCTT-CCCCHHHHHHHHHHHHHH----HHTTC
T ss_pred HHHHHHHH--CCCCEEEEcCCHHHHHhcCCccHHHHHHHcCCEEEEecCCCC-CCCCHHHHHHHHHHHHHH----HhCCC
Confidence 33455554 46999999996421 222 4456778999999999996 678776666665444433 33678
Q ss_pred eEEEEcCCCCChhHHHHHHHHHH-hcCCCHHHHHHHHHhcC-CCccCCHHHHHHHHHHHhccCC
Q 006472 203 YILVHCTHGHNRTGYMIVHFLMR-SQSMSVAQAIKKFAEVR-PPGIYKNEYIEALYTFYHEKRL 264 (643)
Q Consensus 203 ~VlVHC~~G~~RSG~li~aYLm~-~~g~s~~eAi~~~~~~R-p~~i~~~~~l~~L~~~y~~~~~ 264 (643)
+|+|||++|+||||+++|+|||. ..|+++++|++.++++| +.++.+..|...|++++..+..
T Consensus 135 ~VlVHC~aG~gRTg~~~a~~L~~~~~g~~~~~a~~~vr~~R~~~~~~~~~Q~~~l~~~~~~l~~ 198 (212)
T 1fpz_A 135 KTLIHSYGGLGRSCLVAACLLLYLSDTISPEQAIDSLRDLRGSGAIQTIKQYNYLHEFRDKLAA 198 (212)
T ss_dssp CEEEECSSSSSHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHCTTSSCSHHHHHHHTTHHHHHHC
T ss_pred CEEEECCCCCCHHHHHHHHHHHHhccCCCHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998 57999999999999999 7888899999999888776643
No 46
>2q05_A Late protein H1, dual specificity protein phosphatase; structural genomics, APC7320, P protein structure initiative; HET: MSE; 2.57A {Vaccinia virus WR}
Probab=99.71 E-value=8.8e-17 Score=157.75 Aligned_cols=117 Identities=22% Similarity=0.380 Sum_probs=95.5
Q ss_pred CCCe--eEEEEcCCCCCCCCcchhccCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChh
Q 006472 138 GRKL--GLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRT 215 (643)
Q Consensus 138 ~~~I--~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RS 215 (643)
..+| ++||||+.+.+.+ ...|++|+.+|+.|.. .++ +..++..+.+||+.....+++|+|||++|+|||
T Consensus 69 ~~gI~~~~Vi~l~~~~~~~-----~~~~~~~~~~p~~d~~-~~~---l~~~~~~~~~~i~~~~~~~~~VlVHC~aG~~RS 139 (195)
T 2q05_A 69 SSEVKFKYVLNLTMDKYTL-----PNSNINIIHIPLVDDT-TTD---ISKYFDDVTAFLSKCDQRNEPVLVHCAAGVNRS 139 (195)
T ss_dssp TSSSCCSEEEECSSSCCCC-----TTCCCEEEECCCCCSS-SCC---CGGGHHHHHHHHHHHHHTTCCEEEECSSSSSHH
T ss_pred hCCCCCCEEEEECCCCCCc-----ccCCcEEEEEEcCCCC-ccc---HHHHHHHHHHHHHHHHHcCCcEEEEcCCCCChH
Confidence 4678 9999999765332 2369999999998852 222 222344556677665567899999999999999
Q ss_pred HHHHHHHHHHhcCCC-----HHHHHHHHHhcCCCccCCHHHHHHHHHHHhccC
Q 006472 216 GYMIVHFLMRSQSMS-----VAQAIKKFAEVRPPGIYKNEYIEALYTFYHEKR 263 (643)
Q Consensus 216 G~li~aYLm~~~g~s-----~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~~ 263 (643)
|+++++|||...+|+ +++|++.++++||.++++.+|+++|.+||....
T Consensus 140 g~~v~~yL~~~~~~~~~~v~~~~A~~~vr~~R~~~~~n~~f~~qL~~~~~~~~ 192 (195)
T 2q05_A 140 GAMILAYLMSKNKESLPMLYFLYVYHSMRDLRGAFVENPSFKRQIIEKYVIDK 192 (195)
T ss_dssp HHHHHHHHHHHCCSSCHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHTTC-
T ss_pred HHHHHHHHHHHhCCCccccCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHhcc
Confidence 999999999999999 999999999999999999999999999987654
No 47
>2i6j_A Ssoptp, sulfolobus solfataricus protein tyrosine phosphatase; PTP domain, hydrolase; 1.66A {Sulfolobus solfataricus} PDB: 2i6i_A 2i6m_A 3ro1_A* 2i6o_A* 2dxp_A* 2i6p_A*
Probab=99.69 E-value=4.5e-17 Score=153.76 Aligned_cols=117 Identities=25% Similarity=0.375 Sum_probs=94.5
Q ss_pred CCeeEEEEcCCCCCCC-Cc-------chhccCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCC
Q 006472 139 RKLGLVIDLTNTTRYY-PT-------SDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTH 210 (643)
Q Consensus 139 ~~I~~VIdLt~~~~~y-~~-------~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~ 210 (643)
.+|++||||+.+.+.. .+ +.+...||+|+++|+.|+ ..|+.+.+.+|+ +||++...++ +|||++
T Consensus 27 ~gi~~Vi~l~~~~e~~~~~~~~~~~~~~~~~~gi~~~~~p~~d~-~~p~~~~~~~~~----~~i~~~~~~~---lVHC~a 98 (161)
T 2i6j_A 27 EGVKRVLVLPEDWEIEESWGDKDYYLSILKKNGLQPLHIPIPDG-GVPSDSQFLTIM----KWLLSEKEGN---LVHCVG 98 (161)
T ss_dssp HTCCEEEECSCHHHHHHHHSCHHHHHHHHHHTTCEEEECCCCTT-CCCCHHHHHHHH----HHHHHCCTTE---EEECSS
T ss_pred CCCCEEEEcCchhhhhhhccchhhHHHHHHHcCceEEEecCCCC-CCCChHHHHHHH----HHHHHhCCCC---EEECCC
Confidence 4799999999653221 11 226678999999999886 577776655554 5665443333 999999
Q ss_pred CCChhHHHHHHHHHHhcCCCHHHHHHHHHhcCCCccCCHHHHHHHHHHHhccC
Q 006472 211 GHNRTGYMIVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEKR 263 (643)
Q Consensus 211 G~~RSG~li~aYLm~~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~~ 263 (643)
|+||||+++++|||...|+++++|++.+++.||.++++++|..+|+.++..+.
T Consensus 99 G~~Rtg~~~~~~l~~~~~~~~~~a~~~~r~~R~~~~~~~~q~~~l~~~~~~l~ 151 (161)
T 2i6j_A 99 GIGRTGTILASYLILTEGLEVESAIDEVRLVRPGAVQTYEQEMFLLRVEGMRK 151 (161)
T ss_dssp SSHHHHHHHHHHHHHHHCCCHHHHHHHHHHHSTTCSCSHHHHHHHHHHHHTHH
T ss_pred CCCHHHHHHHHHHHHHcCCCHHHHHHHHHHhCcccCCCHHHHHHHHHHHHHHH
Confidence 99999999999999988999999999999999999999999999999887653
No 48
>3vnn_A DNA ligase 4; non-homologous END joining, DNA repair, XRCC4; HET: DNA; 2.90A {Homo sapiens}
Probab=99.68 E-value=2e-16 Score=146.94 Aligned_cols=102 Identities=19% Similarity=0.294 Sum_probs=80.7
Q ss_pred eeeeecCceeEEEEEEECCEEEEEeCCCccccccCCCCCcCCc--------ccccccCCCCeEeeEEEEEecCCCC----
Q 006472 332 YYATWKADGTRYMMLITIDGCYLIDRCFNFRRVQMRFPCRNSN--------EGLGEKTHHFTLLDGEMIIDKLPDS---- 399 (643)
Q Consensus 332 Y~V~eK~DG~R~ll~i~~~~vyLidR~~~~~~v~~~FP~~~~~--------~~~~~~~~~~tlLDGElV~d~~~~~---- 399 (643)
|++++|+||+|+++++.++++.+++|+++ .++..||+.... ..+ .....++|||||||+-...+.
T Consensus 1 f~~E~K~DG~R~q~~~~g~~v~l~SR~g~--d~t~~fPel~~~~~l~~~i~~~~-~~~~~~~iLDGEiv~~d~~~~~f~~ 77 (139)
T 3vnn_A 1 FYIETKLDGERMQMHKDGDVYKYFSRNGY--NYTDQFGASPTEGSLTPFIHNAF-KADIQICILDGEMMAYNPNTQTFMQ 77 (139)
T ss_dssp CCCCCCCCCEEEEEEEETTEEEEECSSCC--BCTTTSCSSTTC--CCSGGGSCC-CTTCCEEEEEEEEEEEETTTTEECC
T ss_pred CEEEEEECeEEEEEEEECCEEEEEeCCCC--CchhhccchhhhcchhHHHHHHH-hccCCceEeeeEEEEecCCCCCHHH
Confidence 78999999999999999999999999998 447789975421 111 112367999999999432211
Q ss_pred -------------CCcceEEEEeEeeecCCeeccCCCHHHHHHHHHHHhc
Q 006472 400 -------------RRQERRYLIYDMMAINQASVIERPFYERWKMLEKEVI 436 (643)
Q Consensus 400 -------------~~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~v~ 436 (643)
...++.|++||+|++||++++++||.+|+++|++.+.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~vFDlL~l~G~~L~~~pl~eRr~~L~~l~~ 127 (139)
T 3vnn_A 78 KGTKFDIKRMVEDSDLQTCYCVFDVLMVNNKKLGHETLRKRYEILSSIFT 127 (139)
T ss_dssp C-------------CCEEEEEEEEEEEETTEECSSSCHHHHHHHHHHHCC
T ss_pred HHhhhhhhhhhhccCceEEEEEEEEEeECCcCcccCCHHHHHHHHHHHhh
Confidence 0136789999999999999999999999999999663
No 49
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana}
Probab=99.63 E-value=1.1e-15 Score=159.42 Aligned_cols=118 Identities=17% Similarity=0.184 Sum_probs=91.1
Q ss_pred CCeeEEEEcCCCCC--CC--Ccch----hccC-CcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcc-cCCCeEEEEc
Q 006472 139 RKLGLVIDLTNTTR--YY--PTSD----LKKE-GIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQK-HSKKYILVHC 208 (643)
Q Consensus 139 ~~I~~VIdLt~~~~--~y--~~~~----~~~~-gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~-~~~~~VlVHC 208 (643)
.+|++||||+.+.. ++ +... .+.. ||+|+++|+.|. . ...+..++..+.+||+++. ..+++|||||
T Consensus 38 ~GIt~Vlnl~~~~e~~~~g~~~~~~~~~~~~~~gi~~~~ipi~D~-~---~~~l~~~~~~~~~~I~~~l~~~g~~VLVHC 113 (294)
T 3nme_A 38 IGVKTIFCLQQDPDLEYFGVDISSIQAYAKKYSDIQHIRCEIRDF-D---AFDLRMRLPAVVGTLYKAVKRNGGVTYVHS 113 (294)
T ss_dssp TTEEEEEECCCHHHHHHTTCCHHHHHHHHHTCTTCEEEECCCCTT-C---HHHHHHHHHHHHHHHHHHHHHHCSEEEEEC
T ss_pred CCCCEEEECCCCcchhhccCChhhhhhhhhhcCCcEEEEEeCCCC-C---CCCHHHHHHHHHHHHHHHHHhCCCEEEEEC
Confidence 57999999986532 11 2212 2333 799999999986 2 2345455677778888764 4578999999
Q ss_pred CCCCChhHHHHHHHHHHhcCCCHHHHHHHHHhcCCCccCCHHHHHHHH-HHHhc
Q 006472 209 THGHNRTGYMIVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALY-TFYHE 261 (643)
Q Consensus 209 ~~G~~RSG~li~aYLm~~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~-~~y~~ 261 (643)
++|+||||++++||||...||++++|+++++++||. .+|.+++.+.. .+...
T Consensus 114 ~aG~sRS~tvv~ayLm~~~g~s~~~A~~~v~~~Rp~-~Pn~~~l~~~~~~~L~~ 166 (294)
T 3nme_A 114 TAGMGRAPAVALTYMFWVQGYKLMEAHKLLMSKRSC-FPKLDAIRNATIDILTG 166 (294)
T ss_dssp SSSSSHHHHHHHHHHHHTSCCCHHHHHHHHHHHCCC-CCCHHHHHHHHHHHHHC
T ss_pred CCCCchhHHHHHHHHHHHhCCCHHHHHHHHHHhCCC-CCChhhhhHHHHHhhhc
Confidence 999999999999999999999999999999999999 88987776643 44343
No 50
>1xri_A AT1G05000; structural genomics, protein structure initiative, CESG for eukaryotic structural genomics, phosphoprote phosphatase; 3.30A {Arabidopsis thaliana} SCOP: c.45.1.1 PDB: 2q47_A
Probab=99.55 E-value=2.1e-15 Score=141.24 Aligned_cols=100 Identities=17% Similarity=0.263 Sum_probs=75.0
Q ss_pred CCeeEEEEcCCCCCCCC-cchhccCCcEEEEeeccCCCC---CCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCCh
Q 006472 139 RKLGLVIDLTNTTRYYP-TSDLKKEGIKHVKIQCKGRDA---VPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNR 214 (643)
Q Consensus 139 ~~I~~VIdLt~~~~~y~-~~~~~~~gI~y~~ip~~d~~~---~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~R 214 (643)
.+|++||||+.+..... ++.++..||+|+++|+.|... .++.+.+.+++ +++. ...+++|+|||++|+||
T Consensus 32 ~gi~~Vi~l~~~~e~~~~~~~~~~~gi~~~~ipi~d~~~~~~~~~~~~~~~~~----~~i~--~~~~~~vlvHC~aG~~R 105 (151)
T 1xri_A 32 LGLRSIIYLCPEPYPESNLQFLKSNGIRLFQFGIEGNKEPFVNIPDHKIRMAL----KVLL--DEKNHPVLIHCKRGKHR 105 (151)
T ss_dssp HTCSEEEECCSSCCCHHHHHHHHHHTCEEEECCCCCCCGGGCCCCHHHHHHHH----HHHH--CGGGCSEEEECSSSSSH
T ss_pred CCCCEEEECCCCCcChhHHHHHHhcCCeEEecccccccCccccCCHHHHHHHH----HHHH--cCCCCCEEEECCCCCCH
Confidence 46999999996543221 233455799999999988521 22444454444 4444 23578999999999999
Q ss_pred hHHHHHHHHHHhcCCCHHHHHHHHHhcCCCc
Q 006472 215 TGYMIVHFLMRSQSMSVAQAIKKFAEVRPPG 245 (643)
Q Consensus 215 SG~li~aYLm~~~g~s~~eAi~~~~~~Rp~~ 245 (643)
||+++|+||+ ..||+.++|++.++..|++.
T Consensus 106 Tg~~~a~~l~-~~g~~~~~a~~~~~~~~~~~ 135 (151)
T 1xri_A 106 TGCLVGCLRK-LQKWCLTSIFDEYQRFAAAK 135 (151)
T ss_dssp HHHHHHHHHH-HTTBCHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHH-HhCCCHHHHHHHHHHhcCCC
Confidence 9999988887 58999999999999999873
No 51
>2f46_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.41A {Neisseria meningitidis Z2491}
Probab=99.20 E-value=6.1e-11 Score=111.81 Aligned_cols=93 Identities=14% Similarity=0.153 Sum_probs=72.0
Q ss_pred CCeeEEEEcCCCCCCC-Cc------chhccCCcE-EEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCC
Q 006472 139 RKLGLVIDLTNTTRYY-PT------SDLKKEGIK-HVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTH 210 (643)
Q Consensus 139 ~~I~~VIdLt~~~~~y-~~------~~~~~~gI~-y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~ 210 (643)
.+|++||||+.+.+.. .+ +.++..||+ |+++|+.+. .|+.+.+..|... +. ..+++|+|||++
T Consensus 41 ~Gi~~IIdlR~~~E~~~~p~~~~~~~~~~~~gi~~~~~iPv~~~--~~~~~~~~~~~~~----l~---~~~~pVlvHC~s 111 (156)
T 2f46_A 41 LGIKTIICNRPDREEESQPDFAQIKQWLEQAGVTGFHHQPVTAR--DIQKHDVETFRQL----IG---QAEYPVLAYCRT 111 (156)
T ss_dssp HTCCEEEECSCTTSSTTCCCHHHHHHHHGGGTCCEEEECCCCTT--TCCHHHHHHHHHH----HH---TSCSSEEEECSS
T ss_pred CCCCEEEECCCCccccCCCcHHHHHHHHHHCCCHhheECccCCC--CCCHHHHHHHHHH----HH---hCCCCEEEECCC
Confidence 3699999998554322 11 134567999 999999874 6777777766543 33 247899999999
Q ss_pred CCChhHHHHHHHHHHhcCCCHHHHHHHHHhcC
Q 006472 211 GHNRTGYMIVHFLMRSQSMSVAQAIKKFAEVR 242 (643)
Q Consensus 211 G~~RSG~li~aYLm~~~g~s~~eAi~~~~~~R 242 (643)
|. ||++++++||+. .||+.++|++.++++.
T Consensus 112 G~-Rs~~l~al~l~~-~g~~~~~a~~~~~~~g 141 (156)
T 2f46_A 112 GT-RCSLLWGFRRAA-EGMPVDEIIRRAQAAG 141 (156)
T ss_dssp SH-HHHHHHHHHHHH-TTCCHHHHHHHHHHTT
T ss_pred CC-CHHHHHHHHHHH-cCCCHHHHHHHHHHcC
Confidence 99 999999999986 8999999999999874
No 52
>3mmj_A MYO-inositol hexaphosphate phosphohydrolase; phytase, protein tyrosine phosphatase, inositol phosphate, I phosphatase; HET: IHP; 1.60A {Selenomonas ruminantium} SCOP: c.45.1.4 PDB: 1u24_A 1u25_A* 1u26_A* 3o3l_A* 3moz_A* 2pt0_A 2psz_A 3d1h_A 3d1o_A 3d1q_A 2b4u_A 2b4p_A 2b4o_A
Probab=99.13 E-value=1.7e-10 Score=119.74 Aligned_cols=82 Identities=16% Similarity=0.280 Sum_probs=68.5
Q ss_pred chhccCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHH-HHhcCCCHHHHH
Q 006472 157 SDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFL-MRSQSMSVAQAI 235 (643)
Q Consensus 157 ~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~li~aYL-m~~~g~s~~eAi 235 (643)
+.++..|++|++||+.|+ .+|+.+.+..|+. |+.. ...+..|+|||.+|.||||+++|+|+ |...+++.++++
T Consensus 175 e~~~~~Gl~Y~rlPi~D~-~aP~~e~id~fl~----~v~~-l~~~~~i~vHC~aG~GRTgt~ma~y~ll~~~~vs~eeii 248 (314)
T 3mmj_A 175 EVAEAAGMRYFRIAATDH-VWPTPENIDRFLA----FYRT-LPQDAWLHFHSEAGVGRTTAFMVMTDMLKNPSVSLKDIL 248 (314)
T ss_dssp HHHHHTTCEEEEEEECTT-SCCCHHHHHHHHH----HHHT-CCTTCEEEEECSSSSHHHHHHHHHHHHHHCTTSCHHHHH
T ss_pred HHHHhCCCEEEEeCcCCC-CCCCHHHHHHHHH----HHHH-cCCCCCEEEECCCCCchHHHHHHHHHHHHCCCCCHHHHH
Confidence 456789999999999997 6899998888875 4443 23568999999999999999999995 455689999999
Q ss_pred HHHHhcCCC
Q 006472 236 KKFAEVRPP 244 (643)
Q Consensus 236 ~~~~~~Rp~ 244 (643)
+.++..-+.
T Consensus 249 ~r~~~lgg~ 257 (314)
T 3mmj_A 249 YRQHEIGGF 257 (314)
T ss_dssp HHHHHTTSC
T ss_pred HHHHHhCCc
Confidence 999877653
No 53
>1fpr_A Protein-tyrosine phosphatase 1C; protein tyrosine phosphatase, substrate specificity, residue shift, signaling protein; HET: PTR; 2.50A {Homo sapiens} SCOP: c.45.1.2 PDB: 1gwz_A
Probab=99.11 E-value=3.4e-10 Score=117.17 Aligned_cols=141 Identities=18% Similarity=0.265 Sum_probs=96.6
Q ss_pred CceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCeeEEEEcCCCC--------CCCCcch---------------
Q 006472 102 GCIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTT--------RYYPTSD--------------- 158 (643)
Q Consensus 102 ~~flp~k~Pl~~~~~~~i~~~~~~~~~~l~~~~~~~~~~I~~VIdLt~~~--------~~y~~~~--------------- 158 (643)
..||+.-.||..+.... +.++.+ .++..||-||+.. .|+....
T Consensus 77 ~~yIatQgPl~~T~~dF--------W~MVwe------~~~~~IVmlt~~~E~g~~kc~~YwP~~~~~~~~g~~~V~~~~~ 142 (284)
T 1fpr_A 77 KTYIASQGCLEATVNDF--------WQMAWQ------ENSRVIVMTTREVEKGRNKCVPYWPEVGMQRAYGPYSVTNCGE 142 (284)
T ss_dssp CEEECBBCCCGGGHHHH--------HHHHHH------TTCCEEEECSCCBCSSSCSBCCCSCCBTEEEEETTEEEEEEEE
T ss_pred ceEEEeCCCChhhHHHH--------HHHHhc------cCCCEEEECCcceECccccchhhCCCCCCCeEECCEEEEEEEE
Confidence 46888888887765553 344543 5788899998642 2332110
Q ss_pred ----------h--c-------cCCcEEEEe-eccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHH
Q 006472 159 ----------L--K-------KEGIKHVKI-QCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYM 218 (643)
Q Consensus 159 ----------~--~-------~~gI~y~~i-p~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~l 218 (643)
| . ...|.+++. ..+|++.+++...+..|+..+..... ....+++|+|||.+|+||||++
T Consensus 143 ~~~~~~~~r~l~v~~~~~~~~~r~V~h~~~~~WpD~~vP~~~~~~l~~~~~v~~~~~-~~~~~~pivVHCsaGvGRTGtf 221 (284)
T 1fpr_A 143 HDTTEYKLRTLQVSPLDNGDLIREIWHYQYLSWPDHGVPSEPGGVLSFLDQINQRQE-SLPHAGPIIVHSSAGIGRTGTI 221 (284)
T ss_dssp CCCSSBCCEEEEEEESSCSSSCEEEEECCBCCSCTTSCCSCSHHHHHHHHHHHHHHT-TSTTCCCEEEESSBSSHHHHHH
T ss_pred EecCCEEEEEEEEEECCCCCceEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHh-hcCCCCcEEEEcCCCCcHHHHH
Confidence 0 0 112333333 46777544456788888887765432 2235789999999999999999
Q ss_pred HHHHHH----HhcC----CCHHHHHHHHHhcCCCccCCHHHHHHHHH
Q 006472 219 IVHFLM----RSQS----MSVAQAIKKFAEVRPPGIYKNEYIEALYT 257 (643)
Q Consensus 219 i~aYLm----~~~g----~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~ 257 (643)
||++++ ...| +++.+|+..+|+.|+..+.+..|...++.
T Consensus 222 ia~~~~l~~l~~~g~~~~vdv~~~v~~lR~qR~~~Vqt~~Qy~fiy~ 268 (284)
T 1fpr_A 222 IVIDMLMENISTKGLDCDIDIQKTIQMVRAQRSGMVQTEAQYKFIYV 268 (284)
T ss_dssp HHHHHHHHHHHHHCTTSCCCHHHHHHHHHTTSTTSSCSSHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCceecHHHHHHHHHhhCCCCCCCHHHHHHHHH
Confidence 999865 3345 68999999999999999999888777654
No 54
>1p15_A Protein-tyrosine phosphatase alpha; transmembrane, hydrolase, phosphorylation; 2.00A {Mus musculus} SCOP: c.45.1.2
Probab=99.08 E-value=3.1e-10 Score=115.56 Aligned_cols=144 Identities=22% Similarity=0.309 Sum_probs=98.4
Q ss_pred CceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCeeEEEEcCCCC--------CCCCcch---------------
Q 006472 102 GCIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTT--------RYYPTSD--------------- 158 (643)
Q Consensus 102 ~~flp~k~Pl~~~~~~~i~~~~~~~~~~l~~~~~~~~~~I~~VIdLt~~~--------~~y~~~~--------------- 158 (643)
..||+.-.||.++.... +.++.+ .++..||-||... +|+..+.
T Consensus 52 ~~yIatQ~Pl~~T~~dF--------W~MVwe------~~~~~IVmLt~~~E~~~~kc~~YwP~~~~~~~g~~~V~~~~~~ 117 (253)
T 1p15_A 52 DSYIASQGPLLHTIEDF--------WRMIWE------WKSCSIVMLTELEERGQEKCAQYWPSDGLVSYGDITVELKKEE 117 (253)
T ss_dssp TCEEEECCCCSSSHHHH--------HHHHHH------TTCCEEEECSCSCSSSSCCSCCCSCSSSCCEETTEECCSCCCE
T ss_pred ceEEEeCCCChHHHHHH--------hHhhee------CCCCEEEECCccccCCeehhhhhcCCCCceEECCEEEEEEEEE
Confidence 36888888987655543 344443 5788999998653 2221100
Q ss_pred -----------hc------cCCcEEEEe-eccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHH
Q 006472 159 -----------LK------KEGIKHVKI-QCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIV 220 (643)
Q Consensus 159 -----------~~------~~gI~y~~i-p~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~li~ 220 (643)
+. ...|.|++. ..+|++.+++...+.+|+..+.+.- ....+++|+|||.+|+||||++||
T Consensus 118 ~~~~~~~r~l~v~~~~~~~~r~V~h~~y~~Wpd~gvP~~~~~~l~~i~~v~~~~--~~~~~~pivVHCsaGvGRTGtfia 195 (253)
T 1p15_A 118 ECESYTVRDLLVTNTRENKSRQIRQFHFHGWPEVGIPSDGKGMINIIAAVQKQQ--QQSGNHPITVHCSAGAGRTGTFCA 195 (253)
T ss_dssp ECSSEEEEEEEEECSSCCEEEEEEEEEECCSCSSSCCSSSCSHHHHHHHHHHHT--TTTTSCCEEEESSSSSHHHHHHHH
T ss_pred ecCCEEEEEEEEEECCCCCceEEEEeeeCCCCCCCCCCCHHHHHHHHHHHHHhh--hccCCCCEEEEcCCCCchhHHHHH
Confidence 00 122444444 4577755445556777776665431 134568999999999999999999
Q ss_pred HHHHHh-----cCCCHHHHHHHHHhcCCCccCCHHHHHHHHHHHhc
Q 006472 221 HFLMRS-----QSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHE 261 (643)
Q Consensus 221 aYLm~~-----~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~ 261 (643)
++++.. ..+++.+++..+|+.|+..+.+..|...+++.-.+
T Consensus 196 ~~~~~~~l~~~~~vdv~~~v~~lR~qR~~~Vqt~~Qy~f~y~~~~~ 241 (253)
T 1p15_A 196 LSTVLERVKAEGILDVFQTVKSLRLQRPHMVQTLEQYEFCYKVVQE 241 (253)
T ss_dssp HHHHHHHHHHHSCCCTTHHHHHHHTTSTTSSCSTTTTHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHhCccccCCHHHHHHHHHHHHH
Confidence 988764 25788999999999999999998888777765443
No 55
>2hc1_A Receptor-type tyrosine-protein phosphatase beta; protein tyrosine phosphatase, WPD-loop, sulfamic acid, inhibitor, drug design, hydrolase; 1.30A {Homo sapiens} PDB: 2h03_A 2hc2_A 2i4g_A* 2h04_A* 2h02_A 2i3u_A 2i3r_A 2i4e_A* 2i4h_A* 2i5x_A* 2ahs_A
Probab=99.06 E-value=1.1e-09 Score=113.92 Aligned_cols=94 Identities=20% Similarity=0.252 Sum_probs=72.5
Q ss_pred cEEEEee-ccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHHHh-----cCCCHHHHHHH
Q 006472 164 IKHVKIQ-CKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRS-----QSMSVAQAIKK 237 (643)
Q Consensus 164 I~y~~ip-~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~li~aYLm~~-----~g~s~~eAi~~ 237 (643)
|.|+++. .+|+|.+++...+.+|+..+.+++... ..+++|+|||.+|+||||++||++++.. ...++.+++..
T Consensus 181 V~h~~y~~WPD~gvP~~~~~ll~~i~~v~~~~~~~-~~~~PivVHCsaGvGRTGtfiai~~~l~~l~~~~~vdv~~~v~~ 259 (291)
T 2hc1_A 181 IRHFHYTVWPDHGVPETTQSLIQFVRTVRDYINRS-PGAGPTVVHCSAGVGRTGTFIALDRILQQLDSKDSVDIYGAVHD 259 (291)
T ss_dssp EEEEEECCCCSSSCCSCHHHHHHHHHHHHHHHHHS-SCCCCEEEECSSSSHHHHHHHHHHHHHHHHHHCC-CCHHHHHHH
T ss_pred EEEeeecCCCCCCCCCCHHHHHHHHHHHHHHHhcC-CCCCCEEEEeCCCCchhHHHHHHHHHHHHHhhcCCCCHHHHHHH
Confidence 4555554 377765556788899998888776532 3467999999999999999999988753 24689999999
Q ss_pred HHhcCCCccCCHHHHHHHHHH
Q 006472 238 FAEVRPPGIYKNEYIEALYTF 258 (643)
Q Consensus 238 ~~~~Rp~~i~~~~~l~~L~~~ 258 (643)
+|+.|+..+.+..|...++..
T Consensus 260 lR~qR~~~Vqt~~Qy~fiy~~ 280 (291)
T 2hc1_A 260 LRLHRVHMVQTECQYVYLHQC 280 (291)
T ss_dssp HHTTSTTSSCCC-CHHHHHHH
T ss_pred HHHhCcccCCCHHHHHHHHHH
Confidence 999999999998877776643
No 56
>3b7o_A Tyrosine-protein phosphatase non-receptor type 11; SHP2, PTPN11, tyrosine phosphatase, structural genomics, STR genomics consortium, SGC, deafness; 1.60A {Homo sapiens} PDB: 3jrl_A* 3mow_A* 3o5x_A*
Probab=99.04 E-value=1.3e-09 Score=114.61 Aligned_cols=89 Identities=21% Similarity=0.300 Sum_probs=69.4
Q ss_pred eeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHH----HhcC----CCHHHHHHHHHh
Q 006472 169 IQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLM----RSQS----MSVAQAIKKFAE 240 (643)
Q Consensus 169 ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~li~aYLm----~~~g----~s~~eAi~~~~~ 240 (643)
...+|++.+++...+..|+..+..... ....+++|+|||.+|+||||++||++++ ...| +++.+|+..+|+
T Consensus 208 ~~WpD~gvP~~~~~~l~fl~~v~~~~~-~~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~g~~~~vdv~~~v~~lR~ 286 (316)
T 3b7o_A 208 RTWPDHGVPSDPGGVLDFLEEVHHKQE-SIMDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKGVDCDIDVPKTIQMVRS 286 (316)
T ss_dssp CCCCSSSCCSSSHHHHHHHHHHHHHHH-TSTTCCCEEEEESSSSHHHHHHHHHHHHHHHHHHHCTTSCCCHHHHHHHHHT
T ss_pred cCcccCCCCCChHHHHHHHHHHHHHHh-hcCCCCCEEEEcCCCCcHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHH
Confidence 446787555555788888887765433 2245789999999999999999998865 2335 689999999999
Q ss_pred cCCCccCCHHHHHHHHHH
Q 006472 241 VRPPGIYKNEYIEALYTF 258 (643)
Q Consensus 241 ~Rp~~i~~~~~l~~L~~~ 258 (643)
.|+..+.+..|...++..
T Consensus 287 qR~~~Vqt~~Qy~fiy~~ 304 (316)
T 3b7o_A 287 QRSGMVQTEAQYRFIYMA 304 (316)
T ss_dssp TSTTCSCSHHHHHHHHHH
T ss_pred hCCCCCCCHHHHHHHHHH
Confidence 999999999988777643
No 57
>1jln_A STEP-like ptpase, protein tyrosine phosphatase, receptor type, R; PTP-SL, PTPBR7, ERK2-MAP kinase regulation, hydrolase; 1.81A {Mus musculus} SCOP: c.45.1.2 PDB: 2a8b_A
Probab=99.03 E-value=2e-09 Score=112.18 Aligned_cols=141 Identities=16% Similarity=0.238 Sum_probs=97.9
Q ss_pred ceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCeeEEEEcCCCC-------CCCCcch--h--------------
Q 006472 103 CIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTT-------RYYPTSD--L-------------- 159 (643)
Q Consensus 103 ~flp~k~Pl~~~~~~~i~~~~~~~~~~l~~~~~~~~~~I~~VIdLt~~~-------~~y~~~~--~-------------- 159 (643)
.||+.-.||..+.... +.++.+ .++..||-||... .|+..+. +
T Consensus 102 ~yIatQgPl~~T~~dF--------W~MVwe------~~~~~IVmLt~~~e~~~kc~~YwP~~~~~~g~~~V~~~~~~~~~ 167 (297)
T 1jln_A 102 AFIATQGPMINTVNDF--------WQMVWQ------EDSPVIVMITKLKEKNEKCVLYWPEKRGIYGKVEVLVTGVTECD 167 (297)
T ss_dssp SEEEECCCCGGGHHHH--------HHHHHH------TTCCEEEECSCSBSSSBCCCCCSCSSEEEETTEEEEEEEEEECS
T ss_pred eEEEECCCCcchHHHH--------HHHHHh------cCCCEEEECCCcccCccchhhhcCCCCccCCCEEEEEEeeeecC
Confidence 5888888888766554 345543 5789999998643 2332110 0
Q ss_pred -------------ccCCcEEEEee-ccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHHH
Q 006472 160 -------------KKEGIKHVKIQ-CKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMR 225 (643)
Q Consensus 160 -------------~~~gI~y~~ip-~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~li~aYLm~ 225 (643)
+...|.|+++. .+|++.+++...+.+|+..+..... ....+++|+|||.+|+||||++||++++.
T Consensus 168 ~~~~r~l~v~~~~~~r~V~h~~y~~WPD~gvP~~~~~ll~~i~~v~~~~~-~~~~~~PivVHCsaGvGRTGtfia~~~~~ 246 (297)
T 1jln_A 168 NYTIRNLVLKQGSHTQHVKHYWYTSWPDHKTPDSAQPLLQLMLDVEEDRL-ASEGRGPVVVHCSAGIGRTGCFIATSIGC 246 (297)
T ss_dssp SEEEEEEEEEETTEEEEEEEEEECCSCTTSSCSCSHHHHHHHHHHHHHHH-TCTTSCCEEEESSSSSHHHHHHHHHHHHH
T ss_pred CEEEEEEEEEecCCCeEEEEccccCCCCCCCCCCHHHHHHHHHHHHHHHh-hcCCCCCEEEEeCCCchhhHHHHHHHHHH
Confidence 01224455443 5777555456778888877765432 22457899999999999999999988753
Q ss_pred -----hcCCCHHHHHHHHHhcCCCccCCHHHHHHHHHH
Q 006472 226 -----SQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTF 258 (643)
Q Consensus 226 -----~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~ 258 (643)
...+++.+++..+|+.|+..+.+..|...++..
T Consensus 247 ~~l~~~~~vdv~~~v~~lR~qR~~~Vqt~~Qy~fiy~~ 284 (297)
T 1jln_A 247 QQLKEEGVVDALSIVCQLRVDRGGMVQTSEQYEFVHHA 284 (297)
T ss_dssp HHHHHHSEECHHHHHHHHHHHSTTSSCSHHHHHHHHHH
T ss_pred HHHHhcCcccHHHHHHHHHHhCcCcCCcHHHHHHHHHH
Confidence 234689999999999999999999887777543
No 58
>2b49_A Protein tyrosine phosphatase, non-receptor type 3; human, STRU genomics, structural genomics consortium, SGC, hydrolase; 1.54A {Homo sapiens}
Probab=99.01 E-value=2.6e-09 Score=110.80 Aligned_cols=85 Identities=16% Similarity=0.257 Sum_probs=65.6
Q ss_pred eccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHH----HHhc-CCCHHHHHHHHHhcCCC
Q 006472 170 QCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFL----MRSQ-SMSVAQAIKKFAEVRPP 244 (643)
Q Consensus 170 p~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~li~aYL----m~~~-g~s~~eAi~~~~~~Rp~ 244 (643)
..+|++.+++.+.+..|+..+... ...+++|+|||.+|+||||++||+++ ++.. .+++.+++..+|+.|+.
T Consensus 182 ~WpD~gvP~~~~~~l~~i~~v~~~----~~~~~PivVHCsaGvGRTGtfia~d~~~~~l~~~~~v~~~~~v~~lR~qR~~ 257 (287)
T 2b49_A 182 AWPDHGVPDDSSDFLEFVNYVRSL----RVDSEPVLVHCSAGIGRTGVLVTMETAMCLTERNLPIYPLDIVRKMRDQRAM 257 (287)
T ss_dssp CSCSSSCCSSCHHHHHHHHHHHHH----CCTTCCEEEECSSSSHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTTSTT
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHh----ccCCCcEEEEcCCCCcHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHhccc
Confidence 457775444566777777665433 23468999999999999999999864 3333 36899999999999999
Q ss_pred ccCCHHHHHHHHHH
Q 006472 245 GIYKNEYIEALYTF 258 (643)
Q Consensus 245 ~i~~~~~l~~L~~~ 258 (643)
.+.+..|...+++.
T Consensus 258 ~Vqt~~Qy~fiy~~ 271 (287)
T 2b49_A 258 MVQTSSQYKFVCEA 271 (287)
T ss_dssp CSCSHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHH
Confidence 99999988877654
No 59
>2cjz_A Human protein tyrosine phosphatase PTPN5; protein phosphatase, STEP, hydrolase; HET: PTR; 1.70A {Homo sapiens} PDB: 2bij_A 2bv5_A*
Probab=98.99 E-value=2.3e-09 Score=112.11 Aligned_cols=141 Identities=18% Similarity=0.272 Sum_probs=95.0
Q ss_pred ceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCeeEEEEcCCCC-------CCCCcch--h--------------
Q 006472 103 CIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTT-------RYYPTSD--L-------------- 159 (643)
Q Consensus 103 ~flp~k~Pl~~~~~~~i~~~~~~~~~~l~~~~~~~~~~I~~VIdLt~~~-------~~y~~~~--~-------------- 159 (643)
.||+.-.||..+.... +.++.+ .++..||-||... .|+..+. +
T Consensus 110 ~yIatQgPl~~T~~dF--------W~MVwe------~~~~~IVmLt~~~e~~~kc~~YwP~~~~~~g~~~V~~~~~~~~~ 175 (305)
T 2cjz_A 110 VYIATQGPIVSTVADF--------WRMVWQ------EHTPIIVMITNIEEMNEKCTEYWPEEQVAYDGVEITVQKVIHTE 175 (305)
T ss_dssp SEEEEECCCGGGHHHH--------HHHHHH------HTCCEEEEEC---------CCCSCSSEEEETTEEEEEEEEEECS
T ss_pred eEEEeCCCccccHHHH--------HHHHHh------cCCCEEEEccCccccccchhhhcCCCCceECCEEEEEEEEEecC
Confidence 5888888888766554 445554 3688899888643 2322110 0
Q ss_pred -------------ccCCcEEEEe-eccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHHH
Q 006472 160 -------------KKEGIKHVKI-QCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMR 225 (643)
Q Consensus 160 -------------~~~gI~y~~i-p~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~li~aYLm~ 225 (643)
+...|.+++. ..+|+|.+++...+.+|+..+..........+++|+|||.+|+||||++||++++.
T Consensus 176 ~~~~r~l~v~~~~~~r~V~h~~y~~WPD~gvP~~~~~ll~~i~~v~~~~~~~~~~~~PivVHCsaGvGRTGtfiaid~~l 255 (305)
T 2cjz_A 176 DYRLRLISLKSGTEERGLKHYWFTSWPDQKTPDRAPPLLHLVREVEEAAQQEGPHCAPIIVHSSAGIGRTGCFIATSICC 255 (305)
T ss_dssp SEEEEEEEEEC--CEEEEEEEEECCCCSSCCGGGHHHHHHHHHHHHHHHHHTCSSCCCEEEEESSSSHHHHHHHHHHHHH
T ss_pred CEEEEEEEEEEcCcceEEEEEeeCCCCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCEEEEeCCCcchhHHHHHHHHHH
Confidence 0012333333 24676544456677778777765333334467899999999999999999998763
Q ss_pred -----hcCCCHHHHHHHHHhcCCCccCCHHHHHHHHH
Q 006472 226 -----SQSMSVAQAIKKFAEVRPPGIYKNEYIEALYT 257 (643)
Q Consensus 226 -----~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~ 257 (643)
...+++.+++..+|+.|+..+.+..|...++.
T Consensus 256 ~~l~~~~~vdv~~~v~~lR~qR~~~Vqt~~QY~Fiy~ 292 (305)
T 2cjz_A 256 QQLRQEGVVDILKTTCQLRQDRGGMIQTCEQYQFVHH 292 (305)
T ss_dssp HHHHHHSCBCHHHHHHHHHHHSTTSSCSHHHHHHHHH
T ss_pred HHHHhcCCccHHHHHHHHHHhCcccCCCHHHHHHHHH
Confidence 34579999999999999999999988877654
No 60
>4grz_A Tyrosine-protein phosphatase non-receptor type 6; phosphatase domain, hydrolase; 1.37A {Homo sapiens} PDB: 4gry_A 4gs0_A* 1gwz_A 1fpr_A*
Probab=98.99 E-value=5.5e-09 Score=108.27 Aligned_cols=141 Identities=18% Similarity=0.246 Sum_probs=98.4
Q ss_pred CceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCeeEEEEcCCCC--------CCCCcch----h----------
Q 006472 102 GCIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTT--------RYYPTSD----L---------- 159 (643)
Q Consensus 102 ~~flp~k~Pl~~~~~~~i~~~~~~~~~~l~~~~~~~~~~I~~VIdLt~~~--------~~y~~~~----~---------- 159 (643)
..||+.-.||..+.... +.++.+ .++..||-||... .|+.... +
T Consensus 79 ~~yIatQ~Pl~~T~~dF--------W~MVwe------~~~~~IVmLt~~~E~~~~kc~~YwP~~~~~~~~g~~~V~~~~~ 144 (288)
T 4grz_A 79 KTYIASQGCLEATVNDF--------WQMAWQ------ENSRVIVMTTREVEKGRNKCVPYWPEVGMQRAYGPYSVTNCGE 144 (288)
T ss_dssp CCEEEECCCCGGGHHHH--------HHHHHH------TTCCEEEECSCSEETTEECCCCCSCCTTCEEEETTEEEEEEEE
T ss_pred ceeEEcCCCchHHHHHH--------HHHHHH------hCCCEEEECCchhhCCcccccccCCCCCCceEecCEEEEEEEE
Confidence 47899999988776654 445554 5788899998631 2332110 0
Q ss_pred --------------------ccCCcEEEEe-eccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHH
Q 006472 160 --------------------KKEGIKHVKI-QCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYM 218 (643)
Q Consensus 160 --------------------~~~gI~y~~i-p~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~l 218 (643)
+...|.|++. ..+|++.+++...+..|+..+...... ...+++|+|||.+|+||||++
T Consensus 145 ~~~~~~~~r~l~v~~~~~~~~~r~V~h~~y~~Wpd~gvP~~~~~~l~~~~~v~~~~~~-~~~~~PivVHCsaGvGRTGtf 223 (288)
T 4grz_A 145 HDTTEYKLRTLQVSPLDNGDLIREIWHYQYLSWPDHGVPSEPGGVLSFLDQINQRQES-LPHAGPIIVHSSAGIGRTGTI 223 (288)
T ss_dssp EECSSEEEEEEEEEETTCTTCCEEEEEEEECSCCTTSCCSSSHHHHHHHHHHHHHHHH-STTCCCEEEECSSSSHHHHHH
T ss_pred EecCCeEEEEEEEEecCCCCceEEEEEEEeCCcCcCCcccChHHHHHHHHHHHHHHhh-cCCCCcEEEEeCCCCcHHHHH
Confidence 0011333333 256765444677888888887665442 235689999999999999999
Q ss_pred HHHHHHH----hcC----CCHHHHHHHHHhcCCCccCCHHHHHHHHH
Q 006472 219 IVHFLMR----SQS----MSVAQAIKKFAEVRPPGIYKNEYIEALYT 257 (643)
Q Consensus 219 i~aYLm~----~~g----~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~ 257 (643)
||++++. ..| +++.+++..+|+.|+..+.+..|...++.
T Consensus 224 iaid~~l~~l~~~~~~~~vdv~~~v~~lR~qR~~~Vqt~~Qy~fiy~ 270 (288)
T 4grz_A 224 IVIDMLMENISTKGLDCDIDIQKTIQMVRAQRSGMVQTEAQYKFIYV 270 (288)
T ss_dssp HHHHHHHHHHHHHCTTSCCCHHHHHHHHHTTSTTCSCSHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHhcccccCCHHHHHHHHH
Confidence 9998863 234 78999999999999999999988776654
No 61
>2ooq_A Receptor-type tyrosine-protein phosphatase T; protein tyrosine phosphatase, human, structural GE structural genomics consortium, SGC, hydrolase; HET: B3P; 1.80A {Homo sapiens} PDB: 1rpm_A 2c7s_A
Probab=98.98 E-value=2.7e-09 Score=110.59 Aligned_cols=140 Identities=19% Similarity=0.304 Sum_probs=96.0
Q ss_pred CceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCeeEEEEcCCCC--------CCCCcch---------------
Q 006472 102 GCIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTT--------RYYPTSD--------------- 158 (643)
Q Consensus 102 ~~flp~k~Pl~~~~~~~i~~~~~~~~~~l~~~~~~~~~~I~~VIdLt~~~--------~~y~~~~--------------- 158 (643)
.+||+.-.||.++.... +.++.+ .++..||-||... +|+..+.
T Consensus 90 ~~yIatQ~Pl~~T~~dF--------W~MVwe------~~~~~IVmLt~~~E~g~~kc~~YwP~~~~~~g~~~V~~~~~~~ 155 (286)
T 2ooq_A 90 RHYIATQGPMQETVKDF--------WRMIWQ------ENSASIVMVTNLVEVGRVKCVRYWPDDTEVYGDIKVTLIETEP 155 (286)
T ss_dssp TCEEEECCCCTTTHHHH--------HHHHHH------HTCCEEEECSCSEETTEECSCCCSCSSEEEEBTEEEEEEEEEE
T ss_pred ccEEEEcCCCcchHHHH--------HHHHHh------cCCCEEEECCCceeCCccccccccCCCccEECCEEEEEEEEEe
Confidence 36888888887765543 445554 4788999998642 2332110
Q ss_pred ----------hccCC------cEEEEee-ccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHH
Q 006472 159 ----------LKKEG------IKHVKIQ-CKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVH 221 (643)
Q Consensus 159 ----------~~~~g------I~y~~ip-~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~li~a 221 (643)
+...| |.|++.. .+|++.+++...+..|+..+... ....+++|+|||.+|+||||++||+
T Consensus 156 ~~~~~~r~l~v~~~~~~~~r~V~h~~y~~WpD~gvP~~~~~ll~~i~~v~~~---~~~~~~PivVHCsaGvGRTGtfiai 232 (286)
T 2ooq_A 156 LAEYVIRTFTVQKKGYHEIRELRLFHFTSWPDHGVPCYATGLLGFVRQVKFL---NPPEAGPIVVHCSAGAGRTGCFIAI 232 (286)
T ss_dssp CSSEEEEEEEEEETTSCCCEEEEEEEECSCCTTCCCSCSHHHHHHHHHHHHH---SCTTSCCEEEECSSSSHHHHHHHHH
T ss_pred cCCEEEEEEEEeeccCCCCeEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHh---cCCCCCcEEEEeCCCCcHHHHHHHH
Confidence 11111 3444433 56775444556777777665432 1235689999999999999999999
Q ss_pred HHHHh-----cCCCHHHHHHHHHhcCCCccCCHHHHHHHHHH
Q 006472 222 FLMRS-----QSMSVAQAIKKFAEVRPPGIYKNEYIEALYTF 258 (643)
Q Consensus 222 YLm~~-----~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~ 258 (643)
++|.. ...++.+++..+|+.|+..+.+..|...++..
T Consensus 233 ~~~l~~l~~~~~vdv~~~v~~lR~qR~~~Vqt~~Qy~fiy~~ 274 (286)
T 2ooq_A 233 DTMLDMAENEGVVDIFNCVRELRAQRVNLVQTEEQYVFVHDA 274 (286)
T ss_dssp HHHHHHHHHHSEECHHHHHHHHHHHSTTSSCSHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCHHHHHHHHHhhCcccCCCHHHHHHHHHH
Confidence 88753 24689999999999999999999988887754
No 62
>2cm2_A Tyrosine-protein phosphatase non-receptor type 1; polymorphism, phosphorylation, endoplasmic reticulum, oxidation, hydrolase, acetylation; 1.5A {Homo sapiens} SCOP: c.45.1.2 PDB: 2cm3_A 2cmb_A* 2cmc_A* 2cne_A* 3a5j_A 2cma_A 3a5k_A 3eu0_A 3sme_A 2azr_A* 2b07_A* 2h4g_A* 2h4k_A* 2hb1_A* 2qbp_A* 2qbq_A* 2qbr_A* 2qbs_A* 2zmm_A* 2zn7_A* ...
Probab=98.98 E-value=4.2e-09 Score=110.08 Aligned_cols=87 Identities=20% Similarity=0.267 Sum_probs=65.6
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHH----HHHhcC----CCHHHHHHHHHhcC
Q 006472 171 CKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHF----LMRSQS----MSVAQAIKKFAEVR 242 (643)
Q Consensus 171 ~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~li~aY----Lm~~~g----~s~~eAi~~~~~~R 242 (643)
.+|++.+++...+..|+..+.+.-. ....+++|+|||.+|+||||++||++ +|...+ +++.+++..+|+.|
T Consensus 185 WpD~gvP~~~~~~l~~l~~v~~~~~-~~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~~~~vdv~~~v~~lR~qR 263 (304)
T 2cm2_A 185 WPDFGVPESPASFLNFLFKVRESGS-LSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPSSVDIKKVLLEMRKFR 263 (304)
T ss_dssp CCSSSCCSSSHHHHHHHHHHHHHTT-TSTTSBCEEEESSSSSSHHHHHHHHHHHHHHHHHSSCGGGCCHHHHHHHHTTTS
T ss_pred cCcCCCCCCHHHHHHHHHHHHHHhh-ccCCCCcEEEEcCcCCchhhHHHHHHHHHHHHHhcCCCcccCHHHHHHHHHHhc
Confidence 3676544456677777766644211 12346899999999999999999875 556554 79999999999999
Q ss_pred CCccCCHHHHHHHHHH
Q 006472 243 PPGIYKNEYIEALYTF 258 (643)
Q Consensus 243 p~~i~~~~~l~~L~~~ 258 (643)
+..+.+..|...++..
T Consensus 264 ~~~Vqt~~Qy~fiy~a 279 (304)
T 2cm2_A 264 MGLIQTADQLRFSYLA 279 (304)
T ss_dssp TTCSCSHHHHHHHHHH
T ss_pred ccccCCHHHHHHHHHH
Confidence 9999999988776543
No 63
>2gjt_A Receptor-type tyrosine-protein phosphatase PTPro; tyrosine phosphatase, glepp1, PTPU2, structural genom structural genomics consortium, SGC; 2.15A {Homo sapiens} PDB: 2g59_A 2pi7_A
Probab=98.97 E-value=4.3e-09 Score=109.52 Aligned_cols=137 Identities=24% Similarity=0.378 Sum_probs=92.1
Q ss_pred ceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCeeEEEEcCCCC--------CCCCcc--hhc------------
Q 006472 103 CIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTT--------RYYPTS--DLK------------ 160 (643)
Q Consensus 103 ~flp~k~Pl~~~~~~~i~~~~~~~~~~l~~~~~~~~~~I~~VIdLt~~~--------~~y~~~--~~~------------ 160 (643)
.||+.-.||.++.... +.++.+ .++..||-||... .|+..+ ...
T Consensus 93 ~yIatQgPl~~T~~dF--------W~MVwe------~~~~~IVmLt~~~E~g~~kc~~YwP~~~~~~~~g~~~V~~~~~~ 158 (295)
T 2gjt_A 93 EYIATQGPLPETRNDF--------WKMVLQ------QKSQIIVMLTQCNEKRRVKCDHYWPFTEEPIAYGDITVEMISEE 158 (295)
T ss_dssp CEEEECCCCGGGHHHH--------HHHHHH------TTCCEEEECSCSEETTEECCCCCSCSSSSCEEETTEEEEEEEEE
T ss_pred cEEEecCCCccHHHHH--------HHHHHh------cCCCEEEEccccccCCeecccccCCCCCCceEEeeEEEEEEEEE
Confidence 7888888888766553 344543 5799999999642 233211 110
Q ss_pred -----------------cCCcEEEE-eeccCCCCCCCH---HHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHH
Q 006472 161 -----------------KEGIKHVK-IQCKGRDAVPDN---ASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMI 219 (643)
Q Consensus 161 -----------------~~gI~y~~-ip~~d~~~~P~~---~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~li 219 (643)
...|.|++ ...+|+ .+|+. +.+.+|+..+.+.. ...+++|+|||.+|+||||++|
T Consensus 159 ~~~~~~~r~l~l~~~~~~r~V~h~~y~~WPD~-gvP~~~~~~~~l~~i~~v~~~~---~~~~~PivVHCsaGvGRTGtfi 234 (295)
T 2gjt_A 159 EQDDWACRHFRINYADEMQDVMHFNYTAWPDH-GVPTANAAESILQFVHMVRQQA---TKSKGPMIIHCSAGVGRTGTFI 234 (295)
T ss_dssp ECSSEEEEEEEEEETTEEEEEEEEEECCCCCS-SSCCHHHHHHHHHHHHHHHHHH---HHCCSCEEEESSSSSHHHHHHH
T ss_pred eccceEEEEEEEEECCcccEEEEEeecCCCCC-CCCCcccHHHHHHHHHHHHHhh---ccCCCcEEEEECCCCccchHHH
Confidence 01122333 245776 46764 34555555543322 2357899999999999999999
Q ss_pred HH-HHHHh----cCCCHHHHHHHHHhcCCCccCCHHHHHHHHH
Q 006472 220 VH-FLMRS----QSMSVAQAIKKFAEVRPPGIYKNEYIEALYT 257 (643)
Q Consensus 220 ~a-YLm~~----~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~ 257 (643)
|+ +||.. ..+++.+++..+|+.|+..+.+..|...+++
T Consensus 235 aid~ll~~l~~~~~vdv~~~v~~lR~qR~~~Vqt~~Qy~fiy~ 277 (295)
T 2gjt_A 235 ALDRLLQHIRDHEFVDILGLVSEMRSYRMSMVQTEEQYIFIHQ 277 (295)
T ss_dssp HHHHHHHHHHHCSEECHHHHHHHHHTTSTTSSCSHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHhhccccCCCHHHHHHHHH
Confidence 88 55543 2468999999999999999999988776654
No 64
>3f41_A Phytase; tandem repeat, protein tyrosine phosphatase, inositol phosphatase, hydrolase; 2.30A {Mitsuokella multacida}
Probab=98.97 E-value=1.8e-09 Score=120.95 Aligned_cols=80 Identities=16% Similarity=0.324 Sum_probs=67.0
Q ss_pred chhccCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHHHh-cCCCHHHHH
Q 006472 157 SDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRS-QSMSVAQAI 235 (643)
Q Consensus 157 ~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~li~aYLm~~-~g~s~~eAi 235 (643)
+.++..||+|++||+.|+ ..|+.+.+..|+..+.. ...+..|+|||.+|.|||||+++||+|.+ .++++++||
T Consensus 492 e~~~~~Gi~Y~Ripi~D~-~aP~~e~id~fl~~v~~-----lp~~~~v~vHC~aG~GRTtT~mv~y~m~k~~~~s~~dii 565 (629)
T 3f41_A 492 QLVEKNGLHYYRIAATDH-IWPSAANIDEFINFTRT-----MPANAWLHFHCQAGAGRTTAYMAMYDMMKNPDVSLGDIL 565 (629)
T ss_dssp HHHHHTTCEEEEEEECTT-SCCCHHHHHHHHHHHHH-----SCTTCEEEEECSSSSHHHHHHHHHHHHHHCTTSCHHHHH
T ss_pred HHHHhCCCEEEEeCCCCC-CCCCHHHHHHHHHHHHh-----cCCCCCEEEeCCCCCchHHHHHHHHHHHHcCCCCHHHHH
Confidence 467889999999999997 79999999998754433 23467899999999999999999997764 478999999
Q ss_pred HHHHhcC
Q 006472 236 KKFAEVR 242 (643)
Q Consensus 236 ~~~~~~R 242 (643)
+.....-
T Consensus 566 ~rq~~lg 572 (629)
T 3f41_A 566 SRQYLLG 572 (629)
T ss_dssp HHHHHHT
T ss_pred HHHHhhC
Confidence 9877654
No 65
>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*
Probab=98.97 E-value=3.2e-09 Score=100.12 Aligned_cols=115 Identities=20% Similarity=0.241 Sum_probs=85.4
Q ss_pred HHHHHHcCCCeeEEEEcCCCCCCCC----cchhccCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEE
Q 006472 131 IHQLRVLGRKLGLVIDLTNTTRYYP----TSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILV 206 (643)
Q Consensus 131 ~~~~~~~~~~I~~VIdLt~~~~~y~----~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlV 206 (643)
+..+.+ .++..||++..+...-. .+.++..|++++.+|+ |. ..|+.+++.++++.+.+ ..|+.|||
T Consensus 33 a~~La~--~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~-Dv-~~~~~~~v~~~~~~i~~------~~G~dVLV 102 (157)
T 3gxh_A 33 FSLLKQ--AGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPV-DW-QNPKVEDVEAFFAAMDQ------HKGKDVLV 102 (157)
T ss_dssp HHHHHH--TTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCC-CT-TSCCHHHHHHHHHHHHH------TTTSCEEE
T ss_pred HHHHHH--cCCCEEEECCCcccccccccHHHHHHHcCCeEEEecC-CC-CCCCHHHHHHHHHHHHh------cCCCCEEE
Confidence 344554 45777999875433211 2345678999999999 43 46777888888765542 23459999
Q ss_pred EcCCCCChhHHHHHHHHHHhcCCCHHHHHHHHHhcCCCccCCHHHHHHHHHHH
Q 006472 207 HCTHGHNRTGYMIVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFY 259 (643)
Q Consensus 207 HC~~G~~RSG~li~aYLm~~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y 259 (643)
||.+| .|++.++++||+. .|+++++| +.++..|| +.++..|+.+|..+.
T Consensus 103 nnAgg-~r~~~l~~~~~~~-~G~~~~~A-~~v~~~rp-i~~~~~~w~~~~~~~ 151 (157)
T 3gxh_A 103 HCLAN-YRASAFAYLYQLK-QGQNPNMA-QTMTPWND-ELAIYPKWQALLTEV 151 (157)
T ss_dssp ECSBS-HHHHHHHHHHHHH-TTCCCCHH-HHTGGGTT-CGGGCHHHHHHHHHH
T ss_pred ECCCC-CCHHHHHHHHHHH-cCCCHHHH-HHHHhhCc-ccCCcHHHHHHHHHH
Confidence 99977 5999999999975 89999999 99999999 777777777776543
No 66
>1zc0_A Tyrosine-protein phosphatase, non-receptor type 7; heptp, human tyrosine phosphatase catalytic domain, LC-PTP, hydrolase; 1.85A {Homo sapiens} PDB: 2gp0_A 2qdc_A 2hvl_A 2qdp_A 2qdm_A 3o4s_A 3o4t_A* 3o4u_A* 3d44_A* 3d42_A* 2a3k_A
Probab=98.95 E-value=3.6e-09 Score=110.79 Aligned_cols=140 Identities=20% Similarity=0.307 Sum_probs=93.7
Q ss_pred ceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCeeEEEEcCCCCC-------CCCcch--hc-------------
Q 006472 103 CIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTTR-------YYPTSD--LK------------- 160 (643)
Q Consensus 103 ~flp~k~Pl~~~~~~~i~~~~~~~~~~l~~~~~~~~~~I~~VIdLt~~~~-------~y~~~~--~~------------- 160 (643)
.||+...||..+.... +.++.+ .++..||-||.... |+..+. +.
T Consensus 113 ~yIatQgPl~~T~~dF--------W~MVwe------~~~~~IVMLt~~~E~~~kc~~YwP~~~~~~g~~~V~~~~~~~~~ 178 (309)
T 1zc0_A 113 VYIATQGPMPNTVSDF--------WEMVWQ------EEVSLIVMLTQLREGKEKCVHYWPTEEETYGPFQIRIQDMKECP 178 (309)
T ss_dssp SEEEEECCCGGGHHHH--------HHHHHH------TTCCEEEEECCTTC----CCCCSCSSEEEETTEEEEEEEEEECS
T ss_pred eEEEecCcccccHHHH--------HHHHHh------cCCCEEEECCCccccccccccccCCCCceEccEEEEEEEEEecC
Confidence 6888888887766554 344543 57888999986532 332111 00
Q ss_pred --------------cCCcEEEEee-ccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHHH
Q 006472 161 --------------KEGIKHVKIQ-CKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMR 225 (643)
Q Consensus 161 --------------~~gI~y~~ip-~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~li~aYLm~ 225 (643)
...|.++++. .+|++.+++...+.+|+..+.... .....+++|+|||.+|+||||++||++++.
T Consensus 179 ~~~~r~l~v~~~~~~r~V~h~~y~~WpD~gvP~~~~~ll~~i~~v~~~~-~~~~~~~PIvVHCsaGvGRTGtfiai~~~l 257 (309)
T 1zc0_A 179 EYTVRQLTIQYQEERRSVKHILFSAWPDHQTPESAGPLLRLVAEVEESP-ETAAHPGPIVVHCSAGIGRTGCFIATRIGC 257 (309)
T ss_dssp SEEEEEEEEEETTEEEEEEEEEECSCCTTSCCSCHHHHHHHHHHHHTSC-CCCSSCCCEEEEESSSSHHHHHHHHHHHHH
T ss_pred CEEEEEEEEEecCCceEEEEEEEecccCCCCCCCHHHHHHHHHHHHHHH-hhcCCCCCEEEEeCCCcchhHHHHHHHHHH
Confidence 0123333332 467754445666666665553211 112356899999999999999999998763
Q ss_pred -----hcCCCHHHHHHHHHhcCCCccCCHHHHHHHHH
Q 006472 226 -----SQSMSVAQAIKKFAEVRPPGIYKNEYIEALYT 257 (643)
Q Consensus 226 -----~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~ 257 (643)
...+++.+++..+|+.|+..+.+..|...++.
T Consensus 258 ~~l~~~~~vdv~~~v~~lR~qR~~~Vqt~~Qy~fiy~ 294 (309)
T 1zc0_A 258 QQLKARGEVDILGIVCQLRLDRGGMIQTAEQYQFLHH 294 (309)
T ss_dssp HHHHHHSEECHHHHHHHHHHHSTTCSCCHHHHHHHHH
T ss_pred HHHHhcCcccHHHHHHHHHhhCCCCCCCHHHHHHHHH
Confidence 33578999999999999999999988777754
No 67
>2i75_A Tyrosine-protein phosphatase non-receptor type 4; PTPN4, PTP, tyrosine phosphatase, MEG-1, structural genomics structural genomics consortium, SGC; 2.45A {Homo sapiens}
Probab=98.94 E-value=8.7e-09 Score=108.39 Aligned_cols=140 Identities=17% Similarity=0.278 Sum_probs=95.6
Q ss_pred ceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCeeEEEEcCCCC--------CCCCcc--h--h-----------
Q 006472 103 CIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTT--------RYYPTS--D--L----------- 159 (643)
Q Consensus 103 ~flp~k~Pl~~~~~~~i~~~~~~~~~~l~~~~~~~~~~I~~VIdLt~~~--------~~y~~~--~--~----------- 159 (643)
+||+.-.||..+.... +.++.+ .++..||-||... .|+... . +
T Consensus 114 ~yIatQgPl~~T~~dF--------W~MVwe------~~~~~IVMLt~~~E~g~~kC~~YWP~~~~~~~~g~~~V~~~~~~ 179 (320)
T 2i75_A 114 QYIACQGPLPHTCTDF--------WQMTWE------QGSSMVVMLTTQVERGRVKCHQYWPEPTGSSSYGCYQVTCHSEE 179 (320)
T ss_dssp EEEEECCCCGGGHHHH--------HHHHHH------TTCCEEEECSCSEETTEECSCCCSCCTTCEEEETTEEEEECCCB
T ss_pred eEEEEcCCchhhHHHH--------HHHHHh------cCCCEEEEccccccCCcccccccCCCCCCceEECCEEEEEEEee
Confidence 4888888887765553 445543 5788999998642 233211 0 0
Q ss_pred ------------c------cCCcEEEEe-eccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHH
Q 006472 160 ------------K------KEGIKHVKI-QCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIV 220 (643)
Q Consensus 160 ------------~------~~gI~y~~i-p~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~li~ 220 (643)
. ...|.|++. ..+|++.+++...+.+|+..+.+.. ...+++|+|||.+|+||||++||
T Consensus 180 ~~~~~~~r~l~v~~~~~~~~r~V~h~~y~~WPD~gvP~~~~~~l~~i~~v~~~~---~~~~~PivVHCsaGvGRTGtfia 256 (320)
T 2i75_A 180 GNTAYIFRKMTLFNQEKNESRPLTQIQYIAWPDHGVPDDSSDFLDFVCHVRNKR---AGKEEPVVVHCSAGIGRTGVLIT 256 (320)
T ss_dssp CCSSEEEEEEEEEETTTTEEEEEEEEEECCCCSSSSCSCTHHHHHHHHHHHHHH---TTCCSCEEEECSSSSSHHHHHHH
T ss_pred ecCCEEEEEEEEEEcCCCCceEEEEeeecCCCCCCCCCchHHHHHHHHHHHHHh---ccCCCCEEEEcCCCCcHHHHHHH
Confidence 0 112344443 4567755555677778877665432 23468999999999999999998
Q ss_pred HH----HHHhc-CCCHHHHHHHHHhcCCCccCCHHHHHHHHHHH
Q 006472 221 HF----LMRSQ-SMSVAQAIKKFAEVRPPGIYKNEYIEALYTFY 259 (643)
Q Consensus 221 aY----Lm~~~-g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y 259 (643)
+. ++... .+++.+++..+|+.|+..+.+..|...++..-
T Consensus 257 id~~l~~l~~~~~v~~~~~v~~lR~qR~~~Vqt~~Qy~fiy~~~ 300 (320)
T 2i75_A 257 METAMCLIECNQPVYPLDIVRTMRDQRAMMIQTPSQYRFVCEAI 300 (320)
T ss_dssp HHHHHHHHHTTCCCCHHHHHHHHHTTSTTCSCSHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHhCcCCCCCHHHHHHHHHHH
Confidence 74 33333 36899999999999999999999988877553
No 68
>2bzl_A Tyrosine-protein phosphatase, non-receptor type 14; PTPN14, hydrolase; 1.65A {Homo sapiens}
Probab=98.93 E-value=1.1e-08 Score=107.75 Aligned_cols=88 Identities=22% Similarity=0.287 Sum_probs=68.6
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHhc-------ccCCCeEEEEcCCCCChhHHHHHHHHHHh-----cCCCHHHHHHHH
Q 006472 171 CKGRDAVPDNASVNNFVYEVTQFLSRQ-------KHSKKYILVHCTHGHNRTGYMIVHFLMRS-----QSMSVAQAIKKF 238 (643)
Q Consensus 171 ~~d~~~~P~~~~i~~f~~~v~~fi~~~-------~~~~~~VlVHC~~G~~RSG~li~aYLm~~-----~g~s~~eAi~~~ 238 (643)
.+|+|.+++...+..|+..+....... ...+++|+|||.+|+||||++||++++.. ..+++.+++..+
T Consensus 215 WPD~gvP~~~~~~l~fl~~v~~~~~~~~~~~~~~~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~vdv~~~v~~l 294 (325)
T 2bzl_A 215 WPDHGCPEDVQGFLSYLEEIQSVRRHTNSMLEGTKNRHPPIVVHCSAGVGRTGVLILSELMIYCLEHNEKVEVPMMLRLL 294 (325)
T ss_dssp CCSSSCCSCHHHHHHHHHHHHHHHHHHTGGGTTSCCCCCCEEEESSSSSHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHhhcccccccCCCCCEEEEeCCCCcHHHHHHHHHHHHHHHHhCCCCCHHHHHHHH
Confidence 467765556777778877665443211 23468999999999999999999988753 357899999999
Q ss_pred HhcCCCccCCHHHHHHHHHH
Q 006472 239 AEVRPPGIYKNEYIEALYTF 258 (643)
Q Consensus 239 ~~~Rp~~i~~~~~l~~L~~~ 258 (643)
|+.|+..+.+..|...+++.
T Consensus 295 R~qR~~~Vqt~~QY~Fiy~~ 314 (325)
T 2bzl_A 295 REQRMFMIQTIAQYKFVYQV 314 (325)
T ss_dssp HTTSTTCSCSHHHHHHHHHH
T ss_pred HHhcccCCCCHHHHHHHHHH
Confidence 99999999999988877654
No 69
>2p6x_A Tyrosine-protein phosphatase non-receptor type 22; tyrosine phosphatase, lymphoid phosphatase, PEP, LYP, struct genomics; 1.90A {Homo sapiens} PDB: 3h2x_A 3brh_A 2qct_A* 2qcj_A* 3olr_A* 3omh_A*
Probab=98.93 E-value=7e-09 Score=108.60 Aligned_cols=139 Identities=19% Similarity=0.321 Sum_probs=94.1
Q ss_pred ceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCeeEEEEcCCCC--------CCCCcc---hh--c---------
Q 006472 103 CIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTT--------RYYPTS---DL--K--------- 160 (643)
Q Consensus 103 ~flp~k~Pl~~~~~~~i~~~~~~~~~~l~~~~~~~~~~I~~VIdLt~~~--------~~y~~~---~~--~--------- 160 (643)
.||+.-.||..+.... +.++.+ .++..||-||... +|+..+ .+ .
T Consensus 98 ~yIatQgPl~~T~~dF--------W~MVwe------~~~~~IVMLt~~~E~g~~kc~~YwP~~~~~~~~~g~~~V~~~~~ 163 (309)
T 2p6x_A 98 AYIATQGPLSTTLLDF--------WRMIWE------YSVLIIVMACMEYEMGKKKCERYWAEPGEMQLEFGPFSVSCEAE 163 (309)
T ss_dssp EEEEECCCCGGGHHHH--------HHHHHH------TTCCEEEECSCSEETTEECCCCCSCCTTSCCEEETTEEEEEEEE
T ss_pred eEEEeCCCChhHHHHH--------HHHHHc------CCCCEEEECCCcccCccccccccCCCCCCCceEEcCEEEEEEEE
Confidence 6888889988766654 455554 5799999998541 233211 01 0
Q ss_pred ------------------cCCcEEEEe-eccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHH
Q 006472 161 ------------------KEGIKHVKI-QCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVH 221 (643)
Q Consensus 161 ------------------~~gI~y~~i-p~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~li~a 221 (643)
...|.+++. ..+|++.+++...+.+|+..+..+. ...+++|+|||.+|+||||++||+
T Consensus 164 ~~~~~~~~r~l~v~~~~~~r~V~h~~y~~WPD~gvP~~~~~~l~~i~~v~~~~---~~~~~PivVHCsaGvGRTGtfiai 240 (309)
T 2p6x_A 164 KRKSDYIIRTLKVKFNSETRTIYQFHYKNWPDHDVPSSIDPILELIWDVRCYQ---EDDSVPICIHCSAGCGRTGVICAI 240 (309)
T ss_dssp EECSSEEEEEEEEEETTEEEEEEEEEECCCCCTTCGGGGHHHHHHHHHHHHHC---CSCSSCEEEECSSSSSHHHHHHHH
T ss_pred EecCCEEEEEeeecCCCCCeEEEEEeeeccccCCCCCCHHHHHHHHHHHHHHh---ccCCCcEEEEeCCCCcHHHHHHHH
Confidence 011223332 3567754444666777776664431 235689999999999999999998
Q ss_pred HH----HHhcC----CCHHHHHHHHHhcCCCccCCHHHHHHHHHH
Q 006472 222 FL----MRSQS----MSVAQAIKKFAEVRPPGIYKNEYIEALYTF 258 (643)
Q Consensus 222 YL----m~~~g----~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~ 258 (643)
+. ++... +++.+++..+|+.|+..+.+..|...+++.
T Consensus 241 d~~~~~l~~~~~~~~~dv~~~v~~lR~qR~~~Vqt~~Qy~fiy~~ 285 (309)
T 2p6x_A 241 DYTWMLLKDGIIPENFSVFSLIREMRTQRPSLVQTQEQYELVYNA 285 (309)
T ss_dssp HHHHHHHHTTCCCTTCCHHHHHHHHHTTSTTSSCSHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCccCHHHHHHHHHHhCccccCCHHHHHHHHHH
Confidence 64 33322 689999999999999999999887776643
No 70
>1wch_A Protein tyrosine phosphatase, non-receptor type 13; hydrolase, phosphate ION, colorectal cancer alternative splicing, coiled coil, cytoskeleton; 1.85A {Homo sapiens} SCOP: c.45.1.2
Probab=98.92 E-value=7.4e-09 Score=108.69 Aligned_cols=84 Identities=14% Similarity=0.239 Sum_probs=65.8
Q ss_pred eccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHHH-----hcCCCHHHHHHHHHhcCCC
Q 006472 170 QCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMR-----SQSMSVAQAIKKFAEVRPP 244 (643)
Q Consensus 170 p~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~li~aYLm~-----~~g~s~~eAi~~~~~~Rp~ 244 (643)
..+|++.+++.+.+..|+..+.. ...+++|+|||.+|+||||++||++++. ...+++.+++..+|+.|+.
T Consensus 213 ~WPD~gvP~~~~~ll~~i~~v~~-----~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~vdv~~~v~~lR~qR~~ 287 (315)
T 1wch_A 213 AWPDHDTPSQPDDLLTFISYMRH-----IHRSGPIITHCSAGIGRSGTLICIDVVLGLISQDLDFDISDLVRCMRLQRHG 287 (315)
T ss_dssp SCCTTSCCSCHHHHHHHHHHHHH-----HCCSSCEEEECSSSSHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTTSTT
T ss_pred ecCCCCCCCCHHHHHHHHHHHHh-----hCCCCCEEEEcCCCCcHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCcc
Confidence 35677555567778888766543 2356899999999999999999988753 2247999999999999999
Q ss_pred ccCCHHHHHHHHHH
Q 006472 245 GIYKNEYIEALYTF 258 (643)
Q Consensus 245 ~i~~~~~l~~L~~~ 258 (643)
.+.+..|...+++.
T Consensus 288 ~Vqt~~Qy~Fiy~~ 301 (315)
T 1wch_A 288 MVQTEDQYIFCYQV 301 (315)
T ss_dssp CSCSHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHH
Confidence 99999888777643
No 71
>3f41_A Phytase; tandem repeat, protein tyrosine phosphatase, inositol phosphatase, hydrolase; 2.30A {Mitsuokella multacida}
Probab=98.90 E-value=4.3e-09 Score=117.94 Aligned_cols=81 Identities=17% Similarity=0.287 Sum_probs=67.5
Q ss_pred chhccCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHHHhc--CCCHHHH
Q 006472 157 SDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRSQ--SMSVAQA 234 (643)
Q Consensus 157 ~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~li~aYLm~~~--g~s~~eA 234 (643)
+.++..|+.|++||+.|+ ..|+.+.+..|++.+ .. ...+..|+|||.+|.|||||++|||+|.+. ++++++|
T Consensus 194 el~~~~Gl~Y~Ripi~D~-~~P~~e~id~fl~~v----~~-l~~~~~i~vHC~AG~GRTgT~m~~y~m~k~~~~~s~~di 267 (629)
T 3f41_A 194 EMVKQHGANYFRLTLQDH-FRPDDPDVDKFLEFY----KS-LPKDAWLHYHCYAGMGRTTIFMVMHDILKNAKDVSFDDI 267 (629)
T ss_dssp HHHHTTTCEEEEEEECTT-SCCCHHHHHHHHHHH----HT-SCTTCEEEEECSSSSHHHHHHHHHHHHHHHTTTSCHHHH
T ss_pred HHHHhCCCeEEEccCCCC-CCCCHHHHHHHHHHH----Hh-cCCCCCEEEECCCCCCHHHHHHHHHHHHhccCCCCHHHH
Confidence 447889999999999997 699999999887544 43 234689999999999999999999988764 6899999
Q ss_pred HHHHHhcCC
Q 006472 235 IKKFAEVRP 243 (643)
Q Consensus 235 i~~~~~~Rp 243 (643)
|...+..-+
T Consensus 268 I~Rq~~lgg 276 (629)
T 3f41_A 268 IQRQKLIGI 276 (629)
T ss_dssp HHHHHHHSS
T ss_pred HHHHHHhcC
Confidence 988776543
No 72
>3qwu_A DNA ligase; structural genomics, PSI-2, midwest center for structural GE MCSG; HET: DNA ADN; 2.35A {Aquifex aeolicus}
Probab=98.90 E-value=7.5e-09 Score=109.25 Aligned_cols=162 Identities=15% Similarity=0.132 Sum_probs=100.5
Q ss_pred CCCCCCcccccchhhhhhhcccceeeeecCceeEEEEEEECCEEEEEeCCCccccc-cCCCCCcCCcccccccCCCCeEe
Q 006472 309 MQFPGSHPVSLNSDNLQLLRQRYYYATWKADGTRYMMLITIDGCYLIDRCFNFRRV-QMRFPCRNSNEGLGEKTHHFTLL 387 (643)
Q Consensus 309 ~~FPGsqPVslsr~~l~~l~~~~Y~V~eK~DG~R~ll~i~~~~vyLidR~~~~~~v-~~~FP~~~~~~~~~~~~~~~tlL 387 (643)
.+||-=.-+-+-..-+.......|+|+||.||.++-++..+++++.++|++.+..- +-++|...+. .+. ..+++.+|
T Consensus 52 ~GyP~I~R~~~L~~~i~~~f~~~~~veEKLDG~NVRi~~~dG~ilA~TRgG~icP~tT~r~~~~~~~-~f~-~~~P~l~L 129 (370)
T 3qwu_A 52 WGYPHIGRIFLLETGLREQFEAPFWVEEKVDGYNTRIFKYGDNYYALSRGGFICPFTTDRLPDLIDL-RIL-DENPDLVI 129 (370)
T ss_dssp CCCCCCEEESCHHHHHHHHCSSCEEEEEECSSEEEEEEEETTEEEEECTTSCBCHHHHHHHHHHCCC-HHH-HHCTTEEE
T ss_pred CCCCChhhhhchhhhhhhcCCCcEEEEEeeCCeEEEEEEECCEEEEEcCCCcccCcchhhhhhhcCc-hhh-hcCCCeEE
Confidence 46886665544444554444579999999999877776677889999999874200 1122211111 111 12479999
Q ss_pred eEEEEEecCC------CCCCcceEEEEeEeeecCCeeccCCCHHHHHHHHHHHhcCccccccccccccCCCCccCCCCCc
Q 006472 388 DGEMIIDKLP------DSRRQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLEPF 461 (643)
Q Consensus 388 DGElV~d~~~------~~~~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~v~~p~~~~~~~~~~~~~p~~~~~~~pf 461 (643)
||||+....+ ........|+|||+... ....-+|+.+|++++++.-. |.
T Consensus 130 dGEl~g~~npy~~~s~~y~~~~i~F~VFDV~d~--~~~~~L~~~eR~~ll~~~~l-p~---------------------- 184 (370)
T 3qwu_A 130 CAEVAGPENPYIEESPPYVKEDVQLFVFDFMKK--NEQGFLSQEEKMELIEKYNL-PH---------------------- 184 (370)
T ss_dssp EEEEECTTCSSCSCCCTTCCSSCEEEEEEEEET--TCCSCCCHHHHHHHHHHHTC-CB----------------------
T ss_pred EEEEEcCCCCccccCCcccccCceEEEEeCccc--cCCCcCCHHHHHHHHHHCCC-CC----------------------
Confidence 9999986431 11124679999999984 34566899999999887532 11
Q ss_pred EEEecceeech--hHHHHHHHhcccccCCCceEEEEeCC
Q 006472 462 RVRRKDFWLLS--TVNKLLKEFIPKLSHDADGLVFQGWD 498 (643)
Q Consensus 462 ~I~~K~~~~~~--~~~~ll~~~~~~l~h~~DGLIf~p~~ 498 (643)
|..-..+++. +...|.+-+......+.||||++..+
T Consensus 185 -V~ii~~~~~~~~~~~~l~~~l~~l~~~g~EGVVlK~~~ 222 (370)
T 3qwu_A 185 -VEILGRFTASEEGIKKIKEILKRFNEEGREGVVFKEDS 222 (370)
T ss_dssp -CCEEEEECSSHHHHHHHHHHHHHHHHTTCCEEEEEESS
T ss_pred -ccEEEEeCCCCCCHHHHHHHHHHHHhCCCcEEEEecCc
Confidence 1112233344 34444432222334799999999977
No 73
>1yfo_A D1, receptor protein tyrosine phosphatase alpha; hydrolase, signal transduction, glycoprotein, phosphorylation, signal; 2.25A {Mus musculus} SCOP: c.45.1.2
Probab=98.89 E-value=1.2e-08 Score=106.55 Aligned_cols=139 Identities=18% Similarity=0.272 Sum_probs=95.7
Q ss_pred ceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCeeEEEEcCCCC--------CCCCcch----------------
Q 006472 103 CIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTT--------RYYPTSD---------------- 158 (643)
Q Consensus 103 ~flp~k~Pl~~~~~~~i~~~~~~~~~~l~~~~~~~~~~I~~VIdLt~~~--------~~y~~~~---------------- 158 (643)
+||+...||..+.... +.++.+ .++..||-||... .|+..+.
T Consensus 99 ~yIatQgPl~~T~~dF--------W~MVwe------~~~~~IVmLt~~~E~g~~kc~~YwP~~~~~~~g~~~V~~~~~~~ 164 (302)
T 1yfo_A 99 KFIAAQGPKEETVNDF--------WRMIWE------QNTATIVMVTNLKERKECKCAQYWPDQGCWTYGNVRVSVEDVTV 164 (302)
T ss_dssp EEEEECCCCGGGHHHH--------HHHHHH------TTCCEEEECSCSEETTEECSCCCSCSSSEEEETTEEEEEEEEEE
T ss_pred eEEEEhhcchhhHHHH--------HHHHhc------cCCCEEEEccccccCCeeecceeccCCCCeEeccEEEEEEEEEE
Confidence 6888888988766554 445543 5789999998642 2332110
Q ss_pred ----------hcc----------CCcEEEEe-eccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHH
Q 006472 159 ----------LKK----------EGIKHVKI-QCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGY 217 (643)
Q Consensus 159 ----------~~~----------~gI~y~~i-p~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~ 217 (643)
+.. ..|.|++. ..+|++.+++...+.+|+..+... ....+++|+|||.+|+||||+
T Consensus 165 ~~~~~~r~l~v~~~~~~~~~~~~r~V~h~~y~~WpD~gvP~~~~~~l~~i~~v~~~---~~~~~~PivVHCsaGvGRTGt 241 (302)
T 1yfo_A 165 LVDYTVRKFCIQQVGDVTNRKPQRLITQFHFTSWPDFGVPFTPIGMLKFLKKVKAC---NPQYAGAIVVHCSAGVGRTGT 241 (302)
T ss_dssp CSSEEEEEEEEEC---------CEEEEEEEECCCCSSSCCSCSHHHHHHHHHHHHH---SCTTSCCEEEECSSSSHHHHH
T ss_pred cCCcEEEEEEEEEecccCCCCcceEEEEEeecccCCCCcCCCHHHHHHHHHHHHHh---ccCCCCCEEEECCCCCcHHHH
Confidence 011 11333333 356775555566777887766543 123468999999999999999
Q ss_pred HHHHHHHH-----hcCCCHHHHHHHHHhcCCCccCCHHHHHHHHHH
Q 006472 218 MIVHFLMR-----SQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTF 258 (643)
Q Consensus 218 li~aYLm~-----~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~ 258 (643)
+||++++. ...+++.+++..+|+.|+..+.+..|...++..
T Consensus 242 fiaid~~l~~l~~~~~vdv~~~v~~lR~qR~~~Vqt~~Qy~fiy~~ 287 (302)
T 1yfo_A 242 FVVIDAMLDMMHSERKVDVYGFVSRIRAQRCQMVQTDMQYVFIYQA 287 (302)
T ss_dssp HHHHHHHHHHHHHSSEECHHHHHHHHTTTSTTSSCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCHHHHHHHHHHhccccCCCHHHHHHHHHH
Confidence 99987763 224799999999999999999999888777654
No 74
>3i36_A Vascular protein tyrosine phosphatase 1; PTP, hydrolase; 1.84A {Rattus norvegicus} PDB: 2nz6_A 2cfv_A
Probab=98.88 E-value=1.7e-08 Score=107.22 Aligned_cols=143 Identities=19% Similarity=0.317 Sum_probs=99.3
Q ss_pred CceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCeeEEEEcCCCC--------CCCCcch---h-----------
Q 006472 102 GCIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTT--------RYYPTSD---L----------- 159 (643)
Q Consensus 102 ~~flp~k~Pl~~~~~~~i~~~~~~~~~~l~~~~~~~~~~I~~VIdLt~~~--------~~y~~~~---~----------- 159 (643)
..||+.-.||..+.... +.++.+ .++..||-||... .|+..+. +
T Consensus 112 ~~yIatQgPl~~T~~dF--------W~MVwe------~~~~~IVMLt~~~E~g~~kC~~YWP~~~~~~~g~~~V~~~~~~ 177 (342)
T 3i36_A 112 KDFIATQGPLPNTLKDF--------WRMVWE------KNVYAIVMLTKCVEQGRTKCEEYWPSKQAQDYGDITVAMTSEV 177 (342)
T ss_dssp TSEEEECCCCGGGHHHH--------HHHHHH------TTCCEEEECSCSBSSSSBCSCCCSCCSSCEEETTEEEEEEEEE
T ss_pred ceEEEECCCChhhHHHH--------HHHHHH------cCCcEEEecCcccccCccccccccccCCCeeeCCEEEEEEEEE
Confidence 46888888888766553 344543 5789999998641 2332111 0
Q ss_pred ------------------ccCCcEEEEe-eccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHH
Q 006472 160 ------------------KKEGIKHVKI-QCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIV 220 (643)
Q Consensus 160 ------------------~~~gI~y~~i-p~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~li~ 220 (643)
+..-|.++++ ..+|+|.+++...+..|+..+.++... ...+++|+|||.+|+||||++||
T Consensus 178 ~~~~~~~r~l~v~~~~~~~~r~V~h~~y~~WPD~gvP~~~~~ll~f~~~v~~~~~~-~~~~~PiVVHCSAGvGRTGtfia 256 (342)
T 3i36_A 178 VLPEWTIRDFVVKNMQSSESHPLRQFHFTSWPDHGVPDTTDLLINFRYLVRDYMKQ-IPPESPILVHCSAGVGRTGTFIA 256 (342)
T ss_dssp ECSSEEEEEEEEEETTTTEEEEEEEEEECCSCSSSSCSCSHHHHHHHHHHHHHHTT-SCSSCCEEEESSSSSHHHHHHHH
T ss_pred ecCCeEEEEEEEEecCCCceEEEEEEeecCcCcCCCCCCHHHHHHHHHHHHHHHHh-CCCCCCEEEEcCCCChHHHHHHH
Confidence 0011333333 346776555667788888877766542 23568999999999999999999
Q ss_pred HHHHH-----hcCCCHHHHHHHHHhcCCCccCCHHHHHHHHHHH
Q 006472 221 HFLMR-----SQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFY 259 (643)
Q Consensus 221 aYLm~-----~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y 259 (643)
..++- ....++.+++..+|+.|+..+.+..|...+++..
T Consensus 257 id~~l~~l~~~~~vdv~~~V~~lR~qR~~mVqt~~QY~Fiy~~v 300 (342)
T 3i36_A 257 IDRLIYQIENENTVDVYGIVYDLRMHRPLMVQTEDQYVFLNQCV 300 (342)
T ss_dssp HHHHHHHHHHHSEECHHHHHHHHHTTSTTSSCSHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHhCccccCCHHHHHHHHHHH
Confidence 87663 3456899999999999999999999988876543
No 75
>1g4w_R Protein tyrosine phosphatase SPTP; virulence factor, GTPase activating protein, 4-helix bundle, disorder, signaling protein; 2.20A {Salmonella typhimurium} SCOP: a.24.11.1 c.45.1.2 PDB: 1g4u_S
Probab=98.86 E-value=4.7e-09 Score=113.08 Aligned_cols=100 Identities=15% Similarity=0.259 Sum_probs=75.7
Q ss_pred CcEEEEee-ccCCCCCCCHHHHHHHHHHHHHHHHhc-----ccCCCeEEEEcCCCCChhHHHHHHHHHHhc-CCCHHHHH
Q 006472 163 GIKHVKIQ-CKGRDAVPDNASVNNFVYEVTQFLSRQ-----KHSKKYILVHCTHGHNRTGYMIVHFLMRSQ-SMSVAQAI 235 (643)
Q Consensus 163 gI~y~~ip-~~d~~~~P~~~~i~~f~~~v~~fi~~~-----~~~~~~VlVHC~~G~~RSG~li~aYLm~~~-g~s~~eAi 235 (643)
.|.+++++ .+|++.+++...+..|+..+....... ....++|+|||.+|+||||++||+++|+.. .+++.+++
T Consensus 270 ~V~h~~y~~WpD~gvP~~~~~ll~~i~~v~~~~~~~~~~~~~~~~~PivVHCsAGvGRTGtfiaidll~~~~~vdv~~~v 349 (383)
T 1g4w_R 270 TIPVLHVKNWPDHQPLPSTDQLEYLADRVKNSNQNGAPGRSSSDKHLPMIHCLGGVGRTGTMAAALVLKDNPHSNLEQVR 349 (383)
T ss_dssp EEEEEEECSCCTTSCCSSHHHHHHHHHHHHTSCCCCCTTCSCTTSSCCEEESSSSSHHHHHHHHHHHHHHCTTCCHHHHH
T ss_pred EEEEEeeCCcCCcCCCCCHHHHHHHHHHHHHHHhhhccccccCCCCCEEEEeCcCCcHHHHHHHHHHHHhCCCCCHHHHH
Confidence 45666666 788764446667777766554332110 012468899999999999999999999865 37999999
Q ss_pred HHHHhcCCC-ccCCHHHHHHHHHHHhcc
Q 006472 236 KKFAEVRPP-GIYKNEYIEALYTFYHEK 262 (643)
Q Consensus 236 ~~~~~~Rp~-~i~~~~~l~~L~~~y~~~ 262 (643)
..+|+.|++ .+.+..|...+++.....
T Consensus 350 ~~lR~qR~g~~Vqt~~Qy~fl~~~~~~l 377 (383)
T 1g4w_R 350 ADFRDSRNNRMLEDASQFVQLKAMQAQL 377 (383)
T ss_dssp HHHHHHTCTTTTCCHHHHHHHHHHHHHH
T ss_pred HHHHhhCCCCCCCCHHHHHHHHHHHHHH
Confidence 999999995 999999999988776543
No 76
>2i1y_A Receptor-type tyrosine-protein phosphatase; receptor-type protein tyrosine phosphatase precursor, phosph structural genomics, PSI; 2.23A {Homo sapiens} PDB: 2qep_A
Probab=98.84 E-value=1.7e-08 Score=105.34 Aligned_cols=85 Identities=19% Similarity=0.319 Sum_probs=65.2
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHHHh------cCCCHHHHHHHHHhcCCC
Q 006472 171 CKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRS------QSMSVAQAIKKFAEVRPP 244 (643)
Q Consensus 171 ~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~li~aYLm~~------~g~s~~eAi~~~~~~Rp~ 244 (643)
.+|+|.+++...+..|+..+.+.. ...+++|+|||.+|+||||++||++++.. ..+++.+++..+|+.|+.
T Consensus 197 WPD~gvP~~~~~ll~~~~~v~~~~---~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~~vdv~~~v~~lR~qR~~ 273 (301)
T 2i1y_A 197 WPAEGTPASTRPLLDFRRKVNKCY---RGRSCPIIVHCSDGAGRTGTYILIDMVLNRMAKGVKEIDIAATLEHVRDQRPG 273 (301)
T ss_dssp CCSSSBCSCSHHHHHHHHHHHHSC---CCSSCCEEEECSSSSHHHHHHHHHHHHHHHHHTTCSCCCHHHHHHHHHTTSTT
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHh---CCCCCCEEEEECCCCchhHHHHHHHHHHHHHHhcCCCcCHHHHHHHHHHhCcc
Confidence 467655555667777776664321 23468999999999999999999876531 137999999999999999
Q ss_pred ccCCHHHHHHHHHH
Q 006472 245 GIYKNEYIEALYTF 258 (643)
Q Consensus 245 ~i~~~~~l~~L~~~ 258 (643)
.+.+..|...++..
T Consensus 274 ~Vqt~~QY~Fiy~a 287 (301)
T 2i1y_A 274 LVRSKDQFEFALTA 287 (301)
T ss_dssp CSCSHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHH
Confidence 99999888776644
No 77
>2h4v_A Receptor-type tyrosine-protein phosphatase gamma; tyrosine receptor phosphatase, human, structural GENO structural genomics consortium, SGC; HET: FLC; 1.55A {Homo sapiens} PDB: 3qcd_A 3qcc_A 3qcb_A 3qce_A* 3qcf_A* 3qcg_A* 3qch_A* 3qci_A* 3qcj_A* 3qck_A* 2pbn_A 2hy3_A 3qcm_A* 3qcl_A* 3qcn_A
Probab=98.83 E-value=2.7e-08 Score=104.70 Aligned_cols=86 Identities=22% Similarity=0.181 Sum_probs=64.8
Q ss_pred eccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHHHh-----cCCCHHHHHHHHHhcCCC
Q 006472 170 QCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRS-----QSMSVAQAIKKFAEVRPP 244 (643)
Q Consensus 170 p~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~li~aYLm~~-----~g~s~~eAi~~~~~~Rp~ 244 (643)
..+|++.+++...+..|+..+.. .....+++|+|||.+|+||||++||++++.. ..+++.+++..+|+.|+.
T Consensus 218 ~WPD~gvP~~~~~~l~~i~~~~~---~~~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~vdv~~~v~~lR~qR~~ 294 (320)
T 2h4v_A 218 QWPDMGVPEYALPVLTFVRRSSA---ARMPETGPVLVHCSAGVGRTGTYIVIDSMLQQIKDKSTVNVLGFLKHIRTQRNY 294 (320)
T ss_dssp CCCSSSSCSCSHHHHHHHHHHHH---TCCTTCCCEEEESSSSSHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHTTTSTT
T ss_pred CCCcCCCCCCHHHHHHHHHHHHh---hccCCCCCEEEECCCCCcHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhCcc
Confidence 35676544455556666654432 1123568999999999999999999987753 347899999999999999
Q ss_pred ccCCHHHHHHHHHH
Q 006472 245 GIYKNEYIEALYTF 258 (643)
Q Consensus 245 ~i~~~~~l~~L~~~ 258 (643)
.+.+..|...+++.
T Consensus 295 ~Vqt~~QY~Fiy~~ 308 (320)
T 2h4v_A 295 LVQTEEQYIFIHDA 308 (320)
T ss_dssp SSCSHHHHHHHHHH
T ss_pred cCCcHHHHHHHHHH
Confidence 99999988877654
No 78
>2jjd_A Receptor-type tyrosine-protein phosphatase epsilo; transmembrane, phosphoprotein, consorti structural, glycoprotein, SGC, PTPRE, membrane genomics; 3.20A {Homo sapiens}
Probab=98.77 E-value=3.5e-08 Score=112.31 Aligned_cols=89 Identities=21% Similarity=0.259 Sum_probs=70.1
Q ss_pred eccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHHHh----c-CCCHHHHHHHHHhcCCC
Q 006472 170 QCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRS----Q-SMSVAQAIKKFAEVRPP 244 (643)
Q Consensus 170 p~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~li~aYLm~~----~-g~s~~eAi~~~~~~Rp~ 244 (643)
..+|+|.+++...+..|+..+.+... ...+++|+|||.+|+||||++||++++.. . ..++.+++..+|+.|+.
T Consensus 489 ~WPD~gvP~~~~~ll~~i~~v~~~~~--~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~vdv~~~V~~lR~qR~~ 566 (599)
T 2jjd_A 489 GWPEIGIPAEGKGMIDLIAAVQKQQQ--QTGNHPITVHCSAGAGRTGTFIALSNILERVKAEGLLDVFQAVKSLRLQRPH 566 (599)
T ss_dssp CSCSSSCCSCCHHHHHHHHHHHHHHH--HSTTCCEEEECSSSSSHHHHHHHHHHHHHHHHHHSEECHHHHHHHHHTTSTT
T ss_pred CCCCCCCCCChHHHHHHHHHHHHHHh--ccCCCcEEEEeCCCCchHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHhhCcc
Confidence 35677666566778888877766543 23568999999999999999999877642 2 35899999999999999
Q ss_pred ccCCHHHHHHHHHHHh
Q 006472 245 GIYKNEYIEALYTFYH 260 (643)
Q Consensus 245 ~i~~~~~l~~L~~~y~ 260 (643)
.+.+..|...+++.-.
T Consensus 567 mVqt~~QY~F~y~~l~ 582 (599)
T 2jjd_A 567 MVQTLEQYEFCYKVVQ 582 (599)
T ss_dssp SSCSHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHH
Confidence 9999998888775433
No 79
>3s3e_A Tyrosine-protein phosphatase 10D; differentiation, neurogenesis, signal transduction, developm protein, hydrolase; 2.40A {Drosophila melanogaster} PDB: 3s3f_A 3s3h_A* 3s3k_A*
Probab=98.77 E-value=5.9e-08 Score=101.49 Aligned_cols=142 Identities=15% Similarity=0.214 Sum_probs=96.3
Q ss_pred CceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCeeEEEEcCCC--------CCCCCcch--h--c---------
Q 006472 102 GCIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNT--------TRYYPTSD--L--K--------- 160 (643)
Q Consensus 102 ~~flp~k~Pl~~~~~~~i~~~~~~~~~~l~~~~~~~~~~I~~VIdLt~~--------~~~y~~~~--~--~--------- 160 (643)
..||+.-.||..+.... +.++.+ .++..||-||.. ..|+..+. . .
T Consensus 113 ~~yIatQgPl~~T~~dF--------W~MVwe------~~~~~IVMLt~~~E~g~~kc~~YWP~~~~~~~~g~~~V~~~~~ 178 (307)
T 3s3e_A 113 REFIVTQGPLHSTRDDF--------WRMCWE------SNSRAIVMLTRCFEKGREKCDQYWPNDTVPVFYGDIKVQILND 178 (307)
T ss_dssp TSEEEECCCCGGGHHHH--------HHHHHH------TTCCEEEECSCSEETTEECSCCCSCSSSSCEEETTEEEEEEEE
T ss_pred ceeEEecCCChhhHHHH--------HHHHHH------hCCcEEEEcCCcccCCcccccccCCCCCCCEEEeeEEEEEEEE
Confidence 36888888888766554 344543 578999999863 12332110 0 0
Q ss_pred ------------------cCCcEEEEe-eccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHH
Q 006472 161 ------------------KEGIKHVKI-QCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVH 221 (643)
Q Consensus 161 ------------------~~gI~y~~i-p~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~li~a 221 (643)
..-|.++++ ..+|+|.+++...+.+|+..+.+.. ....++|+|||.+|+||||++||.
T Consensus 179 ~~~~~~~~r~l~v~~~~~~r~V~h~~y~~WPD~gvP~~~~~ll~fi~~v~~~~---~~~~~PIvVHCsaGvGRTGtfiai 255 (307)
T 3s3e_A 179 SHYADWVMTEFMLCRGSEQRILRHFHFTTWPDFGVPNPPQTLVRFVRAFRDRI---GAEQRPIVVHCSAGVGRSGTFITL 255 (307)
T ss_dssp EECSSEEEEEEEEEETTEEEEEEEEEECCCCSSSCCSSTHHHHHHHHHHHHHH---CSCCSCEEEECSSSSHHHHHHHHH
T ss_pred EEeccEEEEEEEEecCCcceEEEEEEECCcccCCCCCChHHHHHHHHHHHHHh---cCCCCCEEEEcCCCchHHHHHHHH
Confidence 011223332 2457655556677777877665443 234679999999999999999998
Q ss_pred HHHHhc-----CCCHHHHHHHHHhcCCCccCCHHHHHHHHHHHh
Q 006472 222 FLMRSQ-----SMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYH 260 (643)
Q Consensus 222 YLm~~~-----g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~ 260 (643)
..+..+ ..++.+++..+|+.|+..+.+..|...++....
T Consensus 256 d~~l~~l~~~~~vdv~~~V~~lR~qR~~mVqt~~QY~Fi~~~ll 299 (307)
T 3s3e_A 256 DRILQQINTSDYVDIFGIVYAMRKERVWMVQTEQQYICIHQCLL 299 (307)
T ss_dssp HHHHHHTTTCSEECHHHHHHHHHHHSTTSSCCHHHHHHHHHHHH
T ss_pred HHHHHHHhccCCCCHHHHHHHHHhhCCCCcCCHHHHHHHHHHHH
Confidence 877532 357899999999999999999999887765443
No 80
>2oc3_A Tyrosine-protein phosphatase non-receptor type 18; protein tyrosine phosphatase, human, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=98.76 E-value=2.8e-08 Score=103.77 Aligned_cols=85 Identities=22% Similarity=0.326 Sum_probs=66.7
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHH----HHHhc----CCCHHHHHHHHHhcC
Q 006472 171 CKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHF----LMRSQ----SMSVAQAIKKFAEVR 242 (643)
Q Consensus 171 ~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~li~aY----Lm~~~----g~s~~eAi~~~~~~R 242 (643)
.+|++.+++...+..|+..+.... ...+++|+|||.+|+||||++||++ ++..+ .+++.+++..+|+.|
T Consensus 199 WpD~gvP~~~~~~l~~i~~v~~~~---~~~~~PivVHCsaGvGRTGtfiaid~~~~~ll~~~~~~~vdv~~~v~~lR~qR 275 (303)
T 2oc3_A 199 WPDRGVPSSPDHMLAMVEEARRLQ---GSGPEPLCVHCSAGCGRTGVLCTVDYVRQLLLTQMIPPDFSLFDVVLKMRKQR 275 (303)
T ss_dssp CCSSSCCSCSHHHHHHHHHHHHHH---CSSCCCEEEECSSSSHHHHHHHHHHHHHHHHHTTCCCTTCCHHHHHHHHHTTS
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHh---cCCCCcEEEEECCCCcceeEEEeHHHHHHHHHhcccCCCcCHHHHHHHHHhhc
Confidence 467655545677777777665432 2346899999999999999999998 66532 468999999999999
Q ss_pred CCccCCHHHHHHHHHH
Q 006472 243 PPGIYKNEYIEALYTF 258 (643)
Q Consensus 243 p~~i~~~~~l~~L~~~ 258 (643)
+..+.+..|...++..
T Consensus 276 ~~~Vqt~~Qy~fiy~~ 291 (303)
T 2oc3_A 276 PAAVQTEEQYRFLYHT 291 (303)
T ss_dssp TTSSCSHHHHHHHHHH
T ss_pred cccCCCHHHHHHHHHH
Confidence 9999999988887654
No 81
>2b3o_A Tyrosine-protein phosphatase, non-receptor type 6; protein tyrosine phosphatase, SHP-1, signaling, hydrolase; 2.80A {Homo sapiens} PDB: 1x6c_A 2rmx_A* 2yu7_A*
Probab=98.75 E-value=6e-08 Score=108.91 Aligned_cols=86 Identities=19% Similarity=0.300 Sum_probs=68.1
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHHHh----cC----CCHHHHHHHHHhcC
Q 006472 171 CKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRS----QS----MSVAQAIKKFAEVR 242 (643)
Q Consensus 171 ~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~li~aYLm~~----~g----~s~~eAi~~~~~~R 242 (643)
.+|++.+++...+..|+..+...... ...+++|+|||.+|+||||++||++++.. .| .++.+++..+|+.|
T Consensus 417 Wpd~gvP~~~~~~l~~~~~v~~~~~~-~~~~~PivVHCsaG~GRTGtfia~d~~~~~l~~~~~~~~vdv~~~v~~lR~qR 495 (532)
T 2b3o_A 417 WPDHGVPSEPGGVLSFLDQINQRQES-LPHAGPIIVHCSAGIGRTGTIIVIDMLMENISTKGLDCDIDIQKTIQMVRAQR 495 (532)
T ss_dssp CCSSSCCSSSHHHHHHHHHHHHHHHH-STTCCCEEEECSSSSSHHHHHHHHHHHHHHHHHSCTTSCCCHHHHHHHHTTTS
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHhh-cCCCCCEEEEcCCCCchhHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHhhC
Confidence 56775555567888888887665432 23568999999999999999999876643 34 78999999999999
Q ss_pred CCccCCHHHHHHHHH
Q 006472 243 PPGIYKNEYIEALYT 257 (643)
Q Consensus 243 p~~i~~~~~l~~L~~ 257 (643)
+..+.+..|...++.
T Consensus 496 ~~~Vqt~~Qy~fiy~ 510 (532)
T 2b3o_A 496 SGMVQTEAQYKFIYV 510 (532)
T ss_dssp TTSSCSHHHHHHHHH
T ss_pred cccCCCHHHHHHHHH
Confidence 999999998877654
No 82
>1lar_A Protein (LAR); tyrosine phosphatease, LAR protein, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.2 c.45.1.2 PDB: 2fh7_A 2nv5_A
Probab=98.73 E-value=7.2e-08 Score=109.29 Aligned_cols=141 Identities=18% Similarity=0.331 Sum_probs=99.0
Q ss_pred ceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCeeEEEEcCCCC--------CCCCcch----------------
Q 006472 103 CIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTT--------RYYPTSD---------------- 158 (643)
Q Consensus 103 ~flp~k~Pl~~~~~~~i~~~~~~~~~~l~~~~~~~~~~I~~VIdLt~~~--------~~y~~~~---------------- 158 (643)
.||+...||.++.... +.++.+ .++..||-||... .|+..+.
T Consensus 376 ~yIatQgPl~~T~~dF--------W~MVwe------~~~~~IVmLt~~~E~g~~kc~~YwP~~~~~~~g~~~V~~~~~~~ 441 (575)
T 1lar_A 376 AYIATQGPLAESTEDF--------WRMLWE------HNSTIIVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYN 441 (575)
T ss_dssp CEEEECCCCGGGHHHH--------HHHHHH------TTCCEEEECSCSEETTEESSCCCSCSSSCEEETTEEEEEEEEEE
T ss_pred ceEEecCCCcchHHHH--------HHHHHh------cCCcEEEEccccccCCeecccccCCCCCCcceeeEEEEEEEEEE
Confidence 6888888888766553 445543 5789999998642 2332110
Q ss_pred ----------h------ccCCcEEEEee-ccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHH
Q 006472 159 ----------L------KKEGIKHVKIQ-CKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVH 221 (643)
Q Consensus 159 ----------~------~~~gI~y~~ip-~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~li~a 221 (643)
+ +...|.++++. .+|+|.+++...+..|+..+.+.... ...+++|+|||.+|+||||++||+
T Consensus 442 ~~~~~~r~~~v~~~~~~~~r~V~h~~y~~WPD~gvP~~~~~~l~~i~~v~~~~~~-~~~~~PivVHCsaGvGRTGtfiai 520 (575)
T 1lar_A 442 MPQYILREFKVTDARDGQSRTIRQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQ-FGQDGPITVHCSAGVGRTGVFITL 520 (575)
T ss_dssp CSSEEEEEEEEEETTTTEEEEEEEEEECCSCSSSCCSSCHHHHHHHHHHHHHHHH-TTCCSCEEEESSSSSSHHHHHHHH
T ss_pred cCccEEEEEEEEecCCCCceEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHhh-cCCCCcEEEEECCCCchHHHHHHH
Confidence 0 01123444433 56776555667888888877665432 235689999999999999999999
Q ss_pred HHHHh-----cCCCHHHHHHHHHhcCCCccCCHHHHHHHHHH
Q 006472 222 FLMRS-----QSMSVAQAIKKFAEVRPPGIYKNEYIEALYTF 258 (643)
Q Consensus 222 YLm~~-----~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~ 258 (643)
.++.. ...++.+++..+|+.|+..+.+..|...+++.
T Consensus 521 d~~l~~l~~~~~vdv~~~v~~lR~qR~~~Vqt~~Qy~f~y~~ 562 (575)
T 1lar_A 521 SIVLERMRYEGVVDMFQTVKTLRTQRPAMVQTEDQYQLCYRA 562 (575)
T ss_dssp HHHHHHHHHHSEECHHHHHHHHTTTSTTSSCSHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCHHHHHHHHHhhCchhcCCHHHHHHHHHH
Confidence 88742 34689999999999999999999988877654
No 83
>4az1_A Tyrosine specific protein phosphatase; hydrolase, drug design; 2.18A {Trypanosoma cruzi}
Probab=98.72 E-value=2.9e-08 Score=103.59 Aligned_cols=83 Identities=17% Similarity=0.253 Sum_probs=65.6
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHHHhc-------CCCHHHHHHHHHhcCC
Q 006472 171 CKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRSQ-------SMSVAQAIKKFAEVRP 243 (643)
Q Consensus 171 ~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~li~aYLm~~~-------g~s~~eAi~~~~~~Rp 243 (643)
.+|++.+++...+..|+..+.. ...+++|+|||.+|+||||++||++++..+ .+++.+++..+|+.|+
T Consensus 194 Wpd~gvP~~~~~~l~~~~~v~~-----~~~~~PivVHCsaGvGRTGtfiai~~~~~~l~~~~~~~~~v~~~v~~lR~qR~ 268 (302)
T 4az1_A 194 WPDHGIPQSATSLEALLTNVKN-----SPTTVPVVVHCSAGIGRTGTLIGAYAALTHLERGTLTDTTVYDVVSAMRRQRF 268 (302)
T ss_dssp SCTTSCCSCHHHHHHHHHHHHH-----SCTTSCEEEESSSSSSHHHHHHHHHHHHHHHHTTCCCTTHHHHHHHHHHHHST
T ss_pred CCcCCccCCHHHHHHHHHHHHH-----hCCCCCEEEECCCCCcHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHhcCc
Confidence 4576544467777777665532 125689999999999999999999877643 3789999999999999
Q ss_pred CccCCHHHHHHHHHH
Q 006472 244 PGIYKNEYIEALYTF 258 (643)
Q Consensus 244 ~~i~~~~~l~~L~~~ 258 (643)
..+.+..|...++..
T Consensus 269 ~~Vqt~~QY~Fiy~~ 283 (302)
T 4az1_A 269 GMVQRMEQYFVIYLT 283 (302)
T ss_dssp TCSCSHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHH
Confidence 999999988887754
No 84
>1xk5_A Snurportin-1; protein-RNA-complex, transport protein; HET: TPG; 2.40A {Homo sapiens}
Probab=98.72 E-value=4.3e-07 Score=88.35 Aligned_cols=161 Identities=14% Similarity=0.155 Sum_probs=113.6
Q ss_pred cceeeeecCceeEEEEEEECCEEEEEeCCCccccccCCCCCcCCccccccc--CCCCeEeeEEEEEecCCCCCCcceEEE
Q 006472 330 RYYYATWKADGTRYMMLITIDGCYLIDRCFNFRRVQMRFPCRNSNEGLGEK--THHFTLLDGEMIIDKLPDSRRQERRYL 407 (643)
Q Consensus 330 ~~Y~V~eK~DG~R~ll~i~~~~vyLidR~~~~~~v~~~FP~~~~~~~~~~~--~~~~tlLDGElV~d~~~~~~~~~~~yl 407 (643)
.+|++..-.-|.|||++..++.+-+.+|+|... .+|+..-. .|-... ....||||+...-+ .-+|+
T Consensus 21 ~~Wl~vp~P~GkRcLvva~~G~T~~~~k~G~~~---~~F~S~LP-gG~~~~~~~~~~tILDCI~~e~--------~~tyY 88 (204)
T 1xk5_A 21 QEWIVVVCPVGKRALIVASRGSTSAYTKSGYCV---NRFSSLLP-GGNRRNSTAKDYTILDCIYNEV--------NQTYY 88 (204)
T ss_dssp HHEEEEEEESSEEEEEEEETTEEEEECTTSCEE---EEECCSSS-SSCSSSCCTTCCEEEEEEEEGG--------GTEEE
T ss_pred CCeEEEECCCCcEEEEEecCCeEEEECCCCcEE---EEEcccCC-CCCcccCCCCCCEEEEEEEecC--------CcEEE
Confidence 589999999999999999999988999998621 13432211 110001 23579999988733 24799
Q ss_pred EeEeeecCCeeccCCCHHHHHHHHHHHhcCccccccccccccCCCCccCCCCCcEEEecceeechhHHHHHHHhcccccC
Q 006472 408 IYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLEPFRVRRKDFWLLSTVNKLLKEFIPKLSH 487 (643)
Q Consensus 408 iFDiL~~~G~~l~~~pf~eR~~~L~~~v~~p~~~~~~~~~~~~~p~~~~~~~pf~I~~K~~~~~~~~~~ll~~~~~~l~h 487 (643)
|.|+|+++|.++.+....-|.-.|+.-+.+... ..+. ....++.+..-++++.+. +.|-+-+......
T Consensus 89 VLDvl~W~g~~l~dcetefRffWl~skl~E~~~--l~~~---------s~~n~~~f~~lp~~~c~~-~~l~~~~~~~~~~ 156 (204)
T 1xk5_A 89 VLDVMCWRGHPFYDCQTDFRFYWMHSKLPEEEG--LGEK---------TKLNPFKFVGLKNFPCTP-ESLCDVLSMDFPF 156 (204)
T ss_dssp EEEEEEETTEECTTSCHHHHHHHHHHHTTTSTT--TTSC---------BTTBSSEEEECCEEECSH-HHHHHHHTCCCSS
T ss_pred EEEEEEECCceeecCcHHHHHHHHHHHhccccc--cccc---------cccCCcceEecccccCCH-HHHHHHHccCCCC
Confidence 999999999999999999999999987754210 0000 124567788888888763 2233333345678
Q ss_pred CCceEEEEeCCCCCccCCCCCeEEEec
Q 006472 488 DADGLVFQGWDDPYVPRTHEGLLKWKY 514 (643)
Q Consensus 488 ~~DGLIf~p~~spY~~G~~~~llKWKP 514 (643)
..|||+|-..++-|.+|+++-+.=+||
T Consensus 157 ~~DGlLFyHK~a~Y~~G~TPLv~WLkp 183 (204)
T 1xk5_A 157 EVDGLLFYHKQTHYSPGSTPLVGWLRP 183 (204)
T ss_dssp CEEEEEEEESSCCCCSEEEEEEEEECG
T ss_pred CcceEEEEeccccccCCCCChhhhcch
Confidence 999999999999999998755443354
No 85
>1l8k_A T-cell protein-tyrosine phosphatase; hydrolase; 2.56A {Homo sapiens} SCOP: c.45.1.2
Probab=98.70 E-value=5.6e-08 Score=101.99 Aligned_cols=88 Identities=17% Similarity=0.198 Sum_probs=65.4
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHHH----h-cCCCHHHHHHHHHhcCCCc
Q 006472 171 CKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMR----S-QSMSVAQAIKKFAEVRPPG 245 (643)
Q Consensus 171 ~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~li~aYLm~----~-~g~s~~eAi~~~~~~Rp~~ 245 (643)
.+|++.+++...+..|+..+.+.-. ....+++|+|||.+|+||||++||++++. . ..+++.+++..+|+.|+..
T Consensus 180 WpD~gvP~~~~~~l~~l~~v~~~~~-~~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~vdv~~~v~~lR~qR~~~ 258 (314)
T 1l8k_A 180 WPDFGVPESPASFLNFLFKVRESGS-LNPDHGPAVIHCSAGIGRSGTFSLVDTCLVLMEKGDDINIKQVLLNMRKYRMGL 258 (314)
T ss_dssp CCSSSCCSCSHHHHHHHHHHHHTTT-TSTTSCCEEEEESSSSSHHHHHHHHHHHHHHSSSSCCCCHHHHHHHHTTTBTTC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhh-ccCCCCcEEEEcCCCCcHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcccc
Confidence 3676544456677777766543211 11246899999999999999999986542 2 2479999999999999999
Q ss_pred cCCHHHHHHHHHHH
Q 006472 246 IYKNEYIEALYTFY 259 (643)
Q Consensus 246 i~~~~~l~~L~~~y 259 (643)
+.+..|...++..-
T Consensus 259 Vqt~~Qy~fiy~al 272 (314)
T 1l8k_A 259 IQTPDQLRFSYMAI 272 (314)
T ss_dssp SCSHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH
Confidence 99999988777553
No 86
>2shp_A SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin signaling, SH2 protein; HET: CAT; 2.00A {Homo sapiens} SCOP: c.45.1.2 d.93.1.1 d.93.1.1
Probab=98.68 E-value=1.1e-07 Score=106.53 Aligned_cols=87 Identities=21% Similarity=0.300 Sum_probs=68.6
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHHH----hcC----CCHHHHHHHHHhcC
Q 006472 171 CKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMR----SQS----MSVAQAIKKFAEVR 242 (643)
Q Consensus 171 ~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~li~aYLm~----~~g----~s~~eAi~~~~~~R 242 (643)
.+|++.+++...+..|+..+...... ...+++|+|||.+|+||||++||+.++. ..| .++.+++..+|+.|
T Consensus 423 WPD~gvP~~~~~~l~~~~~v~~~~~~-~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~~~~vdv~~~v~~lR~qR 501 (525)
T 2shp_A 423 WPDHGVPSDPGGVLDFLEEVHHKQES-IMDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKGVDCDIDVPKTIQMVRSQR 501 (525)
T ss_dssp CCSSSCCSCHHHHHHHHHHHHHHHHH-STTCCCEEEECSSSSHHHHHHHHHHHHHHHHHHHCTTSEECHHHHHHHHHTTS
T ss_pred CCCCCcccChHHHHHHHHHHHHHHhc-cCCCCCEEEEcCCCCchhHHHHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHhC
Confidence 46776555678888888877654332 2356899999999999999999986652 334 58899999999999
Q ss_pred CCccCCHHHHHHHHHH
Q 006472 243 PPGIYKNEYIEALYTF 258 (643)
Q Consensus 243 p~~i~~~~~l~~L~~~ 258 (643)
+..+.+..|...++..
T Consensus 502 ~~~Vqt~~QY~fiy~~ 517 (525)
T 2shp_A 502 SGMVQTEAQYRSIYMA 517 (525)
T ss_dssp TTSSCCHHHHHHHHHH
T ss_pred cccCCCHHHHHHHHHH
Confidence 9999999988877654
No 87
>3m4u_A Tyrosine specific protein phosphatase, putative; protein tyrosine phosphatase, hydrolase; 2.39A {Trypanosoma brucei}
Probab=98.66 E-value=6.5e-08 Score=101.12 Aligned_cols=86 Identities=19% Similarity=0.214 Sum_probs=65.4
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHHH----h-cCCC--HHHHHHHHHhcCC
Q 006472 171 CKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMR----S-QSMS--VAQAIKKFAEVRP 243 (643)
Q Consensus 171 ~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~li~aYLm~----~-~g~s--~~eAi~~~~~~Rp 243 (643)
.+|++.+++...+..|+..+.. ...+++|+|||.+|+||||++||++++. . ...+ +.+++..+|+.|+
T Consensus 197 WpD~gvP~~~~~~l~~~~~v~~-----~~~~~PivVHCsaGvGRTGtfiai~~~l~~l~~~~~~d~~v~~~v~~lR~qR~ 271 (306)
T 3m4u_A 197 WPDHGVPESAASFDELLSVIKN-----CVTTSPILVHCSAGIGRTGTLIGAYAALLHIERGILTDSTVYSIVAAMKQKRF 271 (306)
T ss_dssp CCTTSCCSCHHHHHHHHHHHHT-----CCCSSCEEEECSSSSHHHHHHHHHHHHHHHHHTTCCCTTHHHHHHHHHHHHST
T ss_pred CCCCCCCCCHHHHHHHHHHHHh-----hCCCCCEEEEcCCCCcchheeehHHHHHHHHHcCCCcchHHHHHHHHHHhcCc
Confidence 4576544466777777655432 2346899999999999999999988874 2 2346 8899999999999
Q ss_pred CccCCHHHHHHHHHHHhc
Q 006472 244 PGIYKNEYIEALYTFYHE 261 (643)
Q Consensus 244 ~~i~~~~~l~~L~~~y~~ 261 (643)
..+.+..|...++..--+
T Consensus 272 ~~Vqt~~Qy~fiy~~ll~ 289 (306)
T 3m4u_A 272 GMVQRLEQYAVIYMTVLG 289 (306)
T ss_dssp TSSCSHHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHH
Confidence 999999998888765433
No 88
>2vug_A PAB1020; RNA, ligase, AMPPNP, nucleotidyl- transferase; HET: ANP; 2.9A {Pyrococcus abyssi GE5}
Probab=98.65 E-value=3.6e-07 Score=98.23 Aligned_cols=161 Identities=17% Similarity=0.231 Sum_probs=98.5
Q ss_pred CCCCCCccc-ccchhhhhhhcccceeeeecCceeEEEEEEECCEEEEEeCCCcc--ccccCCCCCcCCcccccccCCCCe
Q 006472 309 MQFPGSHPV-SLNSDNLQLLRQRYYYATWKADGTRYMMLITIDGCYLIDRCFNF--RRVQMRFPCRNSNEGLGEKTHHFT 385 (643)
Q Consensus 309 ~~FPGsqPV-slsr~~l~~l~~~~Y~V~eK~DG~R~ll~i~~~~vyLidR~~~~--~~v~~~FP~~~~~~~~~~~~~~~t 385 (643)
.+||--.|. |++...-.......|+|++|+||.|+.++..++.+.+.+|++.. ...+ .||.... ..+.. .....
T Consensus 73 ~~fpkv~~mlsL~~~~~~~~~~~~~vvEeKlDG~~v~l~y~~G~v~a~TRg~g~e~iT~n-~i~~wip-~~L~~-~~~~l 149 (389)
T 2vug_A 73 PGFPHIKRIINLRSGIRRIFKRGEFYVEEKVDGYNVRVVMYKGKMLGITRGGFICPFTTE-RIPDFVP-QEFFK-DNPNL 149 (389)
T ss_dssp CCCCCCEEESSSHHHHHHHSSSCEEEEEEECCSEEEEEEEETTEEEEEETTSCBCHHHHH-HGGGTSC-THHHH-HCTTE
T ss_pred cCCCCcccccCchhhhhhhccCCeEEEEEeecCcEEEEEEECCEEEEEeCCCCCCCCchh-hhhHhHH-HHHhc-CCCcE
Confidence 467764443 55554211222367999999999999998888888899999875 1112 3443111 11110 14569
Q ss_pred EeeEEEEEecCC----C--CCCcceEEEEeEeeecCCeeccCCCHHHHHHHHHHHhcCccccccccccccCCCCccCCCC
Q 006472 386 LLDGEMIIDKLP----D--SRRQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLE 459 (643)
Q Consensus 386 lLDGElV~d~~~----~--~~~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~v~~p~~~~~~~~~~~~~p~~~~~~~ 459 (643)
+||||++.-..+ + ....++.|++||++..++.. -.|+.+|++.|++.-+.. .|.
T Consensus 150 ~L~GEvv~~~~~f~~~n~~np~r~l~F~vFDV~~~~~g~--~~s~~er~~~L~~lG~~~------------vp~------ 209 (389)
T 2vug_A 150 ILVGEMAGPESPYLVEGPPYVKEDIQFFLFDVQEIKTGR--SLPVEERLKIAEEYGINH------------VEV------ 209 (389)
T ss_dssp EEEEEEESSSCSSCSCCCTTCCSSCEEEEEEEEETTTCC--BCCHHHHHHHHHHHTCCB------------CCE------
T ss_pred EEEEEEEecCChHHHhcccCcccCCEEEEEEeeccCCCC--cCCHHHHHHHHHHcCCCC------------CCe------
Confidence 999999875421 1 11257899999998876333 278999999999853211 111
Q ss_pred CcEEEecceeechhHHHHHHHhcccccCCCceEEEEeCC
Q 006472 460 PFRVRRKDFWLLSTVNKLLKEFIPKLSHDADGLVFQGWD 498 (643)
Q Consensus 460 pf~I~~K~~~~~~~~~~ll~~~~~~l~h~~DGLIf~p~~ 498 (643)
+.......+..+.++++.+ ..++.||||++..+
T Consensus 210 ---~~~~~~~~~eel~~~i~~~---~~~~~EGvViK~~d 242 (389)
T 2vug_A 210 ---FGKYTKDDVDELYQLIERL---SKEGREGIIMKSPD 242 (389)
T ss_dssp ---EEEEEGGGHHHHHHHHHHH---HHTTCCEEEEECTT
T ss_pred ---EEEEcCCCHHHHHHHHHHh---cCCCCCeEEEEECC
Confidence 1111110123444555543 36899999999977
No 89
>3ps5_A Tyrosine-protein phosphatase non-receptor type 6; SH2, PTP, hydrolase, signaling protein; 3.10A {Homo sapiens}
Probab=98.65 E-value=1.6e-07 Score=106.76 Aligned_cols=87 Identities=17% Similarity=0.249 Sum_probs=68.3
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHHH----hcC----CCHHHHHHHHHhcC
Q 006472 171 CKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMR----SQS----MSVAQAIKKFAEVR 242 (643)
Q Consensus 171 ~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~li~aYLm~----~~g----~s~~eAi~~~~~~R 242 (643)
.+|++.+++...+..|+..+...... ....++|+|||.+|+||||++||+..+. ..| +++.+++..+|+.|
T Consensus 417 WPD~gvP~~~~~~l~fl~~v~~~~~~-~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~~~~vdv~~~V~~lR~qR 495 (595)
T 3ps5_A 417 WPDHGVPSEPGGVLSFLDQINQRQES-LPHAGPIIVHSSAGIGRTGTIIVIDMLMENISTKGLDCDIDIQKTIQMVRAQR 495 (595)
T ss_dssp CCSSSSCSCSHHHHHHHHHHHHHHHH-CTTCCCEEEECSSSSHHHHHHHHHHHHHHHHHHHCSSCEECHHHHHHHHHTTS
T ss_pred cccCCccCCHHHHHHHHHHHHHHHhh-cCCCCCEEEEcCCCCchHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHhhc
Confidence 56776555677888888887765432 2356899999999999999999987653 234 68999999999999
Q ss_pred CCccCCHHHHHHHHHH
Q 006472 243 PPGIYKNEYIEALYTF 258 (643)
Q Consensus 243 p~~i~~~~~l~~L~~~ 258 (643)
+..+.+..|...++..
T Consensus 496 ~~mVqt~~QY~Fiy~~ 511 (595)
T 3ps5_A 496 SGMVQTEAQYKFIYVA 511 (595)
T ss_dssp TTSSCSHHHHHHHHHH
T ss_pred ccccCCHHHHHHHHHH
Confidence 9999999887776543
No 90
>1ygr_A CD45 protein tyrosine phosphatase; protein tyrosine phosphatase, RPTP, LCA, lymphocyte activation, hydrolase; HET: PTR; 2.90A {Homo sapiens} PDB: 1ygu_A*
Probab=98.65 E-value=1.1e-07 Score=108.58 Aligned_cols=145 Identities=19% Similarity=0.348 Sum_probs=97.7
Q ss_pred ceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCeeEEEEcCCCC--------CCCCcch----------------
Q 006472 103 CIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTT--------RYYPTSD---------------- 158 (643)
Q Consensus 103 ~flp~k~Pl~~~~~~~i~~~~~~~~~~l~~~~~~~~~~I~~VIdLt~~~--------~~y~~~~---------------- 158 (643)
.||+.-.||.++.... +.++.+ .++..||-||... +|+....
T Consensus 408 ~yIatQ~Pl~~T~~dF--------W~MVwe------~~~~~IVMLt~~~E~g~~kc~~Ywp~~~~~~g~~~V~~~~~~~~ 473 (610)
T 1ygr_A 408 VMIAAQGPLKETIGDF--------WQMIFQ------RKVKVIVMLTELKHGDQEICAQYWGEGKQTYGDIEVDLKDTDKS 473 (610)
T ss_dssp EEEEEECCCTTTHHHH--------HHHHHH------TTCCEEEECSCSEETTEESSCCCCCSSCCEETTEECCEEEEEEC
T ss_pred cEEEeCCCChhhHHHH--------HHHHHH------cCcCeEEeccccccCCceeccccCCCCCcEeeeEEEEEEEEEec
Confidence 5788888877655543 345543 5799999998642 2332110
Q ss_pred ---------hcc------CCcEEEEee-ccCCCCCCCHHHHHHHHHHHHHHHHh-------cccCCCeEEEEcCCCCChh
Q 006472 159 ---------LKK------EGIKHVKIQ-CKGRDAVPDNASVNNFVYEVTQFLSR-------QKHSKKYILVHCTHGHNRT 215 (643)
Q Consensus 159 ---------~~~------~gI~y~~ip-~~d~~~~P~~~~i~~f~~~v~~fi~~-------~~~~~~~VlVHC~~G~~RS 215 (643)
+.. ..|.|+++. .+|+|.+++...+..|+..+.+.... ....+++|+|||.+|+|||
T Consensus 474 ~~~~~r~l~l~~~~~~~~r~V~h~~y~~WPd~gvP~~~~~ll~~i~~v~~~~~~~~~~~~~~~~~~~PivVHCsaGvGRT 553 (610)
T 1ygr_A 474 STYTLRVFELRHSKRKDSRTVYQYQYTNWSVEQLPAEPKELISMIQVVKQKLPQKNSSEGNKHHKSTPLLIHCRDGSQQT 553 (610)
T ss_dssp SSEEEEEEEEBCSSCSCCEEEEEEEECSCCSSSCCSCHHHHHHHHHHHHTTSCCCC-------CCCCCEEEEESSSSTTH
T ss_pred CCeEEEEEEEEECCCCCcEEEEEeeeCCCCCCCCCCCHHHHHHHHHHHHHHhhhhccccccccCCCCCEEEEeCCCCcch
Confidence 000 124444443 56776555677777777666443210 0124689999999999999
Q ss_pred HHHHHHHHHHh-----cCCCHHHHHHHHHhcCCCccCCHHHHHHHHHHHhc
Q 006472 216 GYMIVHFLMRS-----QSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHE 261 (643)
Q Consensus 216 G~li~aYLm~~-----~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~ 261 (643)
|++||++++.. ...++.+++..+|+.|+..+.+..|...+++.-.+
T Consensus 554 Gtf~ai~~~l~~~~~~~~vdv~~~V~~lR~qR~~~Vqt~~QY~F~y~~~~~ 604 (610)
T 1ygr_A 554 GIFCALLNLLESAETEEVVDIFQVVKALRKARLGMVSTFEQYQFLYDVIAS 604 (610)
T ss_dssp HHHHHHHHHHHHHHHSSBCCHHHHHHHHHHHSTTTTCSHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhhCCccCHHHHHHHHHHhCccccCCHHHHHHHHHHHHH
Confidence 99999887642 23689999999999999999999998888765443
No 91
>1lar_A Protein (LAR); tyrosine phosphatease, LAR protein, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.2 c.45.1.2 PDB: 2fh7_A 2nv5_A
Probab=98.63 E-value=3e-07 Score=104.23 Aligned_cols=139 Identities=18% Similarity=0.294 Sum_probs=96.5
Q ss_pred ceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCeeEEEEcCCCC--------CCCCcch----------------
Q 006472 103 CIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTT--------RYYPTSD---------------- 158 (643)
Q Consensus 103 ~flp~k~Pl~~~~~~~i~~~~~~~~~~l~~~~~~~~~~I~~VIdLt~~~--------~~y~~~~---------------- 158 (643)
+||+...||..+.... +.++.+ .++..||-||... .|+....
T Consensus 87 ~yIatQgPl~~T~~dF--------W~Mvwe------~~~~~IVmlt~~~E~~~~kc~~YwP~~~~~~~g~~~V~~~~~~~ 152 (575)
T 1lar_A 87 AYIATQGPLPETMGDF--------WRMVWE------QRTATVVMMTRLEEKSRVKCDQYWPARGTETCGLIQVTLLDTVE 152 (575)
T ss_dssp EEEEECCCCTTTHHHH--------HHHHHH------TTCCEEEECSCSEETTEECCCCCSCSSSEEEETTEEEEEEEEEE
T ss_pred eeEecCCCCcchHHHH--------HHHHhh------cCCCEEEEcccceeCCccccccccCCCCCceeeeEEEEEEEEEe
Confidence 5888888887765543 345543 5789999998642 2332110
Q ss_pred ----------hc------cCCcEEEEe-eccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHH
Q 006472 159 ----------LK------KEGIKHVKI-QCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVH 221 (643)
Q Consensus 159 ----------~~------~~gI~y~~i-p~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~li~a 221 (643)
+. ...|.|++. ..+|+|.+++...+..|+..+... ....+++|+|||.+|+||||++|++
T Consensus 153 ~~~~~~r~l~l~~~~~~~~r~V~h~~y~~WpD~gvP~~~~~~l~~~~~v~~~---~~~~~~pivVHCsaGvGRTGtfiai 229 (575)
T 1lar_A 153 LATYTVRTFALHKSGSSEKRELRQFQFMAWPDHGVPEYPTPILAFLRRVKAC---NPLDAGPMVVHCSAGVGRTGCFIVI 229 (575)
T ss_dssp CSSEEEEEEEEEETTSCCEEEEEEEEECCSCSSSCCSCSHHHHHHHHHHHHH---SCTTCCCEEEESSSSSSHHHHHHHH
T ss_pred cCCeEEEEEeeecCCCCccEEEEEEEeCCCCCCCcccCHHHHHHHHHHHHHh---cCCCCCCEEEEecCCCcceeEEEEh
Confidence 00 012444444 357876555667788887766542 1235689999999999999999998
Q ss_pred HHHH-----hcCCCHHHHHHHHHhcCCCccCCHHHHHHHHHH
Q 006472 222 FLMR-----SQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTF 258 (643)
Q Consensus 222 YLm~-----~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~ 258 (643)
.++. ....++.+++..+|+.|+..+.+..|...+++.
T Consensus 230 d~~l~~l~~~~~v~i~~~v~~lR~qR~~~Vqt~~Qy~fi~~~ 271 (575)
T 1lar_A 230 DAMLERMKHEKTVDIYGHVTCMRSQRNYMVQTEDQYVFIHEA 271 (575)
T ss_dssp HHHHHHHHHHSCCCHHHHHHHHHTTSTTSSCSHHHHHHHHHH
T ss_pred HHHHHHHhccCCCCHHHHHHHHHhhhhccCCCHHHHHHhHHH
Confidence 7664 235689999999999999999999887776654
No 92
>2jjd_A Receptor-type tyrosine-protein phosphatase epsilo; transmembrane, phosphoprotein, consorti structural, glycoprotein, SGC, PTPRE, membrane genomics; 3.20A {Homo sapiens}
Probab=98.60 E-value=2.8e-07 Score=104.88 Aligned_cols=85 Identities=21% Similarity=0.272 Sum_probs=65.6
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHH-----HhcCCCHHHHHHHHHhcCCCc
Q 006472 171 CKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLM-----RSQSMSVAQAIKKFAEVRPPG 245 (643)
Q Consensus 171 ~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~li~aYLm-----~~~g~s~~eAi~~~~~~Rp~~ 245 (643)
.+|+|.+++...+..|+..+... ....+++|+|||.+|+||||++||...+ ....+++.+++..+|+.|+..
T Consensus 196 WpD~gvP~~~~~~l~~~~~v~~~---~~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~v~v~~~v~~lR~qR~~~ 272 (599)
T 2jjd_A 196 WPDFGVPFTPIGMLKFLKKVKTL---NPVHAGPIVVHCSAGVGRTGTFIVIDAMMAMMHAEQKVDVFEFVSRIRNQRPQM 272 (599)
T ss_dssp CCSSSCCSCSHHHHHHHHHHHHH---SCTTCCCEEEECSSSSSHHHHHHHHHHHHHHHHHHSEECHHHHHHHHHTTSTTC
T ss_pred CCCCCCCCChHHHHHHHHHHHhh---ccCCCceEEEEeCCCCcccchhhHHHHHHHHHhccCCcCHHHHHHHHHHhhhcc
Confidence 46775555677888888776542 1234689999999999999999985433 345679999999999999999
Q ss_pred cCCHHHHHHHHHH
Q 006472 246 IYKNEYIEALYTF 258 (643)
Q Consensus 246 i~~~~~l~~L~~~ 258 (643)
+.+..|...+++.
T Consensus 273 Vqt~~Qy~f~y~~ 285 (599)
T 2jjd_A 273 VQTDMQYTFIYQA 285 (599)
T ss_dssp SCCHHHHHHHHHH
T ss_pred ccchHHheeeeee
Confidence 9999887766543
No 93
>1ywf_A Phosphotyrosine protein phosphatase PTPB; four stranded parallel beta sheet with flanking helices, structural genomics, PSI; 1.71A {Mycobacterium tuberculosis} SCOP: c.45.1.5 PDB: 2oz5_A*
Probab=98.58 E-value=7.1e-08 Score=100.36 Aligned_cols=112 Identities=14% Similarity=0.238 Sum_probs=70.5
Q ss_pred CCHHHHHHHHHHcCCCeeEEEEcCCCCCC--CCcchhccCCcEEEEeeccCCCC------CCCHH---------------
Q 006472 125 YSFKQVIHQLRVLGRKLGLVIDLTNTTRY--YPTSDLKKEGIKHVKIQCKGRDA------VPDNA--------------- 181 (643)
Q Consensus 125 ~~~~~l~~~~~~~~~~I~~VIdLt~~~~~--y~~~~~~~~gI~y~~ip~~d~~~------~P~~~--------------- 181 (643)
.++.++- .++. .+|++||||....+. +.+. ....|++|+++|+.+... .|...
T Consensus 56 lt~~d~~-~L~~--lGI~tVIDLR~~~E~~~~~pd-~~~~Gi~~~~iPi~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~ 131 (296)
T 1ywf_A 56 LDDAGRA-TLRR--LGITDVADLRSSREVARRGPG-RVPDGIDVHLLPFPDLADDDADDSAPHETAFKRLLTNDGSNGES 131 (296)
T ss_dssp CCHHHHH-HHHH--HTCCEEEECCCHHHHHHHCSC-CCCTTCEEEECCCCCSCC--------------------------
T ss_pred CCHHHHH-HHHh--CCCCEEEECcChhhhhccCCC-CCCCCCEEEEecCccccccccccccchhhHHHHHhhhccccccc
Confidence 3566653 3443 469999999854321 1021 234699999999986421 01000
Q ss_pred ---------HHHHHH--------------HHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHHHhcCCCHHHHHHHH
Q 006472 182 ---------SVNNFV--------------YEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRSQSMSVAQAIKKF 238 (643)
Q Consensus 182 ---------~i~~f~--------------~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~li~aYLm~~~g~s~~eAi~~~ 238 (643)
....++ ..+.++++.... +++|+|||++|++|||++++++|.. .||+.+++++-+
T Consensus 132 ~~~~~~~~~~~~~~m~~~Y~~~~~~~~~~~~~~~~l~~l~~-~~pvl~HC~aGkDRTG~~~alll~~-~g~~~~~I~~DY 209 (296)
T 1ywf_A 132 GESSQSINDAATRYMTDEYRQFPTRNGAQRALHRVVTLLAA-GRPVLTHCFAGKDRTGFVVALVLEA-VGLDRDVIVADY 209 (296)
T ss_dssp -----CCCHHHHHHHHHHHHHGGGSTTHHHHHHHHHHHHHT-TCCEEEECSSSSSHHHHHHHHHHHH-TTCCHHHHHHHH
T ss_pred chhhhcccchHHHHHHHHHHHHHhcchhHHHHHHHHHHhcc-CCCEEEECCCCCccccHHHHHHHHH-cCCCHHHHHHHH
Confidence 000111 122334433222 7899999999999999999999986 899999999988
Q ss_pred HhcC
Q 006472 239 AEVR 242 (643)
Q Consensus 239 ~~~R 242 (643)
....
T Consensus 210 ~~Tn 213 (296)
T 1ywf_A 210 LRSN 213 (296)
T ss_dssp HGGG
T ss_pred HHHH
Confidence 7554
No 94
>3gjx_B Snurportin-1; transport, cytoplasm, nucleus, RNA-binding, acetylation, GTP-binding, HOST-virus interaction, nucleotide-binding, phosphoprotein; HET: GTP; 2.50A {Homo sapiens} PDB: 3nby_B* 3nbz_B* 3nc0_B* 3gb8_B 2qna_B
Probab=98.57 E-value=1.3e-06 Score=90.75 Aligned_cols=161 Identities=14% Similarity=0.170 Sum_probs=113.2
Q ss_pred cceeeeecCceeEEEEEEECCEEEEEeCCCccccccCCCCCcCCcccccc--cCCCCeEeeEEEEEecCCCCCCcceEEE
Q 006472 330 RYYYATWKADGTRYMMLITIDGCYLIDRCFNFRRVQMRFPCRNSNEGLGE--KTHHFTLLDGEMIIDKLPDSRRQERRYL 407 (643)
Q Consensus 330 ~~Y~V~eK~DG~R~ll~i~~~~vyLidR~~~~~~v~~~FP~~~~~~~~~~--~~~~~tlLDGElV~d~~~~~~~~~~~yl 407 (643)
.+|+|..=.-|.|||++...+.+-+++|+|... ..||..-. .|-.. .....||||+...-. .-+|+
T Consensus 122 ~~W~~vpcPvGkRcLVVas~G~T~aysk~G~~l---~~F~S~LP-GG~~~~s~~~~~TILDCIy~e~--------~~tyY 189 (365)
T 3gjx_B 122 QEWIVVVCPVGKRALIVASRGSTSAYTKSGYCV---NRFSSLLP-GGNRRNSTAKDYTILDCIYNEV--------NQTYY 189 (365)
T ss_dssp HHEEEEEEESSEEEEEEEETTEEEEECTTCCEE---EEECCSST-TTCC----CCCCEEEEEEEETT--------TTEEE
T ss_pred cCeeEEeccCCcEEEEEecCceEEEECCCCCEE---eeeCCCCC-CCCccccCCCCCEEEEEEeecC--------CceEE
Confidence 478888888999999999999998999998621 13443211 11100 023579999987632 23799
Q ss_pred EeEeeecCCeeccCCCHHHHHHHHHHHhcCccccccccccccCCCCccCCCCCcEEEecceeechhHHHHHHHhcccccC
Q 006472 408 IYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLEPFRVRRKDFWLLSTVNKLLKEFIPKLSH 487 (643)
Q Consensus 408 iFDiL~~~G~~l~~~pf~eR~~~L~~~v~~p~~~~~~~~~~~~~p~~~~~~~pf~I~~K~~~~~~~~~~ll~~~~~~l~h 487 (643)
|.|+|+|+|.++.+++..-|.-.|+.-+.+... +.+ .....||.+..-+.++.+. +.|-+-+....++
T Consensus 190 VLDVL~W~g~~l~dCeteFRffWl~SKL~E~~~-----l~e------~s~~np~~Fv~lp~~~C~~-esL~~~ls~~~pf 257 (365)
T 3gjx_B 190 VLDVMCWRGHPFYDCQTDFRFYWMHSKLPEEEG-----LGE------KTKLNPFKFVGLKNFPCTP-ESLCDVLSMDFPF 257 (365)
T ss_dssp EEEEEEETTEECTTSCHHHHHHHHHHHGGGSTT-----TTS------CCSSCCSEEEECCEEECCH-HHHHHHTTCCCSS
T ss_pred EEEEeeeCCcccccCchHHHHHHHHHHhhhccc-----ccc------cccCCCCceeccCCCCcCH-HHHHHHhccCCCC
Confidence 999999999999999999999999987744210 100 0123577777778888764 3344444456778
Q ss_pred CCceEEEEeCCCCCccCCCCCeEEEec
Q 006472 488 DADGLVFQGWDDPYVPRTHEGLLKWKY 514 (643)
Q Consensus 488 ~~DGLIf~p~~spY~~G~~~~llKWKP 514 (643)
..|||+|-...+-|.+|.++-+.=+||
T Consensus 258 e~DGLLFYHK~ahY~~G~TPLVgWLkP 284 (365)
T 3gjx_B 258 EVDGLLFYHKQTHYSPGSTPLVGWLRP 284 (365)
T ss_dssp CEEEEEEEETTCCCCSEEEEEEEEECH
T ss_pred ccceEEEEeccccccCCCCccceecch
Confidence 999999999999999998754433344
No 95
>1ygr_A CD45 protein tyrosine phosphatase; protein tyrosine phosphatase, RPTP, LCA, lymphocyte activation, hydrolase; HET: PTR; 2.90A {Homo sapiens} PDB: 1ygu_A*
Probab=98.55 E-value=2.2e-07 Score=105.97 Aligned_cols=140 Identities=18% Similarity=0.221 Sum_probs=93.5
Q ss_pred CceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCeeEEEEcCCCC--------CCCCcch---------------
Q 006472 102 GCIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTT--------RYYPTSD--------------- 158 (643)
Q Consensus 102 ~~flp~k~Pl~~~~~~~i~~~~~~~~~~l~~~~~~~~~~I~~VIdLt~~~--------~~y~~~~--------------- 158 (643)
.+||+.-.||..+.... +.++.+ .++..||-||... .|+....
T Consensus 97 ~~yIatQgPl~~T~~dF--------W~MVwe------~~~~~IVMLt~~~E~~~~kc~~YwP~~~~~~~~~g~~~V~~~~ 162 (610)
T 1ygr_A 97 RKYIAAQGPRDETVDDF--------WRMIWE------QKATVIVMVTRCEEGNRNKCAEYWPSMEEGTRAFGDVVVKINQ 162 (610)
T ss_dssp TCEEEECCCCTTTHHHH--------HHHHHH------TTCCEEEECSCSEETTEESCCCCSCCTTTCEEEETTEEEEEEE
T ss_pred ceEEEeCCCchhHHHHH--------HHHHhc------ccCcEEEeCCccccCCccccceecccCCCCceeeccEEEEEEE
Confidence 36888888887765553 345543 5789999998642 2443110
Q ss_pred -----------h--c-------cCCcEEEEe-eccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHH
Q 006472 159 -----------L--K-------KEGIKHVKI-QCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGY 217 (643)
Q Consensus 159 -----------~--~-------~~gI~y~~i-p~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~ 217 (643)
+ . ...|.|++. ..+|+|.+++...+..|+..+..+ ....+++|+|||.+|+||||+
T Consensus 163 ~~~~~~~~~r~l~l~~~~~~~~~r~V~h~~y~~WPD~gvP~~~~~~l~~~~~v~~~---~~~~~~PivVHCsaGvGRTGt 239 (610)
T 1ygr_A 163 HKRCPDYIIQKLNIVNKKEKATGREVTHIQFTSWPDHGVPEDPHLLLKLRRRVNAF---SNFFSGPIVVHSSAGVGRTGT 239 (610)
T ss_dssp EEECSSEEEEEEEEEESSSCCCCEEEEEEEECSCCTTSCCSCHHHHHHHHHHHTTS---CCTTCCCEEEECSSSSHHHHH
T ss_pred EEecCCcEEEEEEEEeccCCCCCcEEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHh---hccCCCCeEEEcCCCCCchhh
Confidence 0 0 011333333 356775554666666665544221 112468999999999999999
Q ss_pred HHHHHHHH-----hcCCCHHHHHHHHHhcCCCccCCHHHHHHHHHH
Q 006472 218 MIVHFLMR-----SQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTF 258 (643)
Q Consensus 218 li~aYLm~-----~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~ 258 (643)
+||+.++. ...+++.+++..+|+.|+..+.+..|...+++.
T Consensus 240 fiaid~~l~~l~~~~~v~v~~~v~~lR~qR~~~Vqt~~Qy~fi~~~ 285 (610)
T 1ygr_A 240 YIGIDAMLEGLEAENKVDVYGYVVKLRRQRCLMVQVEAQYILIHQA 285 (610)
T ss_dssp HHHHHHHHHTHHHHSEECHHHHHHHHHTTSTTSSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCHHHHHHHHHhhhcCCcCcHHHHHHHHHH
Confidence 99998774 235789999999999999999998877766543
No 96
>4i8n_A Tyrosine-protein phosphatase non-receptor type 1; PTP1B, hydrolase-hydrolase inhibitor CO; HET: 1CG; 2.50A {Homo sapiens}
Probab=98.49 E-value=3.9e-07 Score=97.06 Aligned_cols=87 Identities=18% Similarity=0.230 Sum_probs=64.7
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHH----Hh----cCCCHHHHHHHHHhcC
Q 006472 171 CKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLM----RS----QSMSVAQAIKKFAEVR 242 (643)
Q Consensus 171 ~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~li~aYLm----~~----~g~s~~eAi~~~~~~R 242 (643)
.+|++.+++...+..|+..+.+.-. ....+++|+|||.+|+||||++||+.++ .. ...++.+++..+|+.|
T Consensus 213 WPD~gvP~~~~~~l~~l~~v~~~~~-~~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~~~~vdv~~~V~~lR~qR 291 (354)
T 4i8n_A 213 WPDFGVPESPASFLNFLFKVRESGS-LSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPSSVDIKKVLLEMRKFR 291 (354)
T ss_dssp CCTTCCCSCHHHHHHHHHHHHHTTT-TCTTSCCEEEECSSSSHHHHHHHHHHHHHHHHHHHTCGGGCCHHHHHHHHHTTS
T ss_pred cccCCccCCHHHHHHHHHHHHHHhh-ccCCCCCEEEEeCCCcchHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHhC
Confidence 4576555567777777766644311 1224679999999999999999987643 21 2478999999999999
Q ss_pred CCccCCHHHHHHHHHH
Q 006472 243 PPGIYKNEYIEALYTF 258 (643)
Q Consensus 243 p~~i~~~~~l~~L~~~ 258 (643)
+..+.+..|...++..
T Consensus 292 ~~mVqt~~QY~F~Y~a 307 (354)
T 4i8n_A 292 MGLIQTADQLRFSYLA 307 (354)
T ss_dssp TTCSCSHHHHHHHHHH
T ss_pred cccccCHHHHHHHHHH
Confidence 9999999988776643
No 97
>1lyv_A Protein-tyrosine phosphatase YOPH; toxin, hydrolase; 1.36A {Yersinia enterocolitica} SCOP: c.45.1.2 PDB: 1qz0_A* 1ytn_A 1ytw_A 2i42_A 2y2f_A* 2ydu_A* 1xxp_A* 3blu_A* 1ypt_A* 3blt_A* 1xxv_A* 3f9b_A 3f9a_A 3f99_A 3bm8_A* 1pa9_A* 1yts_A
Probab=98.43 E-value=8e-07 Score=92.80 Aligned_cols=62 Identities=21% Similarity=0.293 Sum_probs=54.0
Q ss_pred CCeEEEEcCCCCChhHHHHHHHHHHhc---CCCHHHHHHHHHhcCCC-ccCCHHHHHHHHHHHhcc
Q 006472 201 KKYILVHCTHGHNRTGYMIVHFLMRSQ---SMSVAQAIKKFAEVRPP-GIYKNEYIEALYTFYHEK 262 (643)
Q Consensus 201 ~~~VlVHC~~G~~RSG~li~aYLm~~~---g~s~~eAi~~~~~~Rp~-~i~~~~~l~~L~~~y~~~ 262 (643)
.++++|||.+|+||||++||+.++..+ .+++.+++..+|+.|+. .+.+..|...+++.-.+.
T Consensus 234 ~~piVVHCSAGvGRTGtfiaid~ll~~~~~~vdv~~~V~~lR~qR~~~mVQt~~QY~fiy~~~~~~ 299 (306)
T 1lyv_A 234 KLRPVIHSRAGVGRTAQLIGAMCMNDSRNSQLSVEDMVSQMRVQRNGIMVQKDEQLDVLIKLAEGQ 299 (306)
T ss_dssp SSCCEEECSSSSSHHHHHHHHHHHTCGGGTTCCHHHHHHHHHHHTCTTSSCSHHHHHHHHHHHHHH
T ss_pred CCCcEEEcCCCCchhHHHHHHHHHHHhhcCCCCHHHHHHHHHhcCCcCcCCCHHHHHHHHHHHHHh
Confidence 457899999999999999999877543 67999999999999999 999999999988776554
No 98
>4ge6_A Tyrosine-protein phosphatase non-receptor type 9; hydrolase-hydrolase inhibitor complex; HET: B26; 1.40A {Homo sapiens} PDB: 4ge2_A* 4ge5_A* 2pa5_A*
Probab=98.41 E-value=9.9e-07 Score=92.43 Aligned_cols=141 Identities=21% Similarity=0.297 Sum_probs=94.8
Q ss_pred ceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCeeEEEEcCCCC--------CCCCcc---h--hc---------
Q 006472 103 CIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTT--------RYYPTS---D--LK--------- 160 (643)
Q Consensus 103 ~flp~k~Pl~~~~~~~i~~~~~~~~~~l~~~~~~~~~~I~~VIdLt~~~--------~~y~~~---~--~~--------- 160 (643)
.||+.-.||..+.... +.++.+ .++..||-||... .|+..+ . +.
T Consensus 96 ~yIaTQgPl~~T~~dF--------W~MVwe------~~~~~IVmLt~~~E~g~~kC~~YwP~~~~~~~~~g~~~V~~~~~ 161 (314)
T 4ge6_A 96 AYIGTQGPLENTYRDF--------WLMVWE------QKVLVIVMTTRFEEGGRRKCGQYWPLEKDSRIRFGFLTVTNLGV 161 (314)
T ss_dssp EEEEECCCCGGGHHHH--------HHHHHH------TTCCEEEECSCSEETTEECCCCCSCCSTTCEEEETTEEEEEEEE
T ss_pred eEEEECCCcHHHHHHH--------HHHHHh------cCCceEEEcccccccceecccccCcCCCCCceecccEEEEEEEE
Confidence 5888888988876654 455554 5799999998542 232210 0 00
Q ss_pred --------------------cCCcEEEE-eeccCCCCCCCHHHHHHHHHHHHHHHHh----------cccCCCeEEEEcC
Q 006472 161 --------------------KEGIKHVK-IQCKGRDAVPDNASVNNFVYEVTQFLSR----------QKHSKKYILVHCT 209 (643)
Q Consensus 161 --------------------~~gI~y~~-ip~~d~~~~P~~~~i~~f~~~v~~fi~~----------~~~~~~~VlVHC~ 209 (643)
..-|.+++ ...+|+|.+++...+.+|+..+.+.-.. .....++|+|||.
T Consensus 162 ~~~~~~~~r~l~~~~~~~~~~r~V~h~~y~~WPd~gvP~~~~~ll~~i~~v~~~~~~~~~~~~~~~~~~~~~~PivVHCS 241 (314)
T 4ge6_A 162 ENMNHYKKTTLEIHNTEERQKRQVTHFQFLSWPDYGVPSSAASLIDFLRVVRNQQSLAVSNMGARSKGQCPEPPIVVHCS 241 (314)
T ss_dssp EECSSEEEEEEEEEETTTTEEEEEEEEEECCSCSSSCCSCSHHHHHHHHHHHHHHHHHHHHSCCC----CCSCCEEEECS
T ss_pred EEcCCceEEEEeeecccCCcceEEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHhhhhccccccccccCCCCCEEEECC
Confidence 01122322 2346776555678888888777544221 1123579999999
Q ss_pred CCCChhHHHHHHHHHH-----hcCCCHHHHHHHHHhcCCCccCCHHHHHHHHH
Q 006472 210 HGHNRTGYMIVHFLMR-----SQSMSVAQAIKKFAEVRPPGIYKNEYIEALYT 257 (643)
Q Consensus 210 ~G~~RSG~li~aYLm~-----~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~ 257 (643)
+|+||||++||...+- ....++.+++..+|+.|+..+.+..|...+++
T Consensus 242 aGvGRTGtfiaid~~l~~l~~~~~vdv~~~V~~lR~qR~~mVqt~~QY~Fiy~ 294 (314)
T 4ge6_A 242 AGIGRTGTFCSLDICLAQLEELGTLNVFQTVSRMRTQRAFSIQTPEQYYFCYK 294 (314)
T ss_dssp SSSHHHHHHHHHHHHHHHHHHHSCBCHHHHHHHHTTTSTTCSCSHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHhhcccccCCHHHHHHHHH
Confidence 9999999999875542 23468999999999999999999998876654
No 99
>2nlk_A Protein tyrosine phosphatase, receptor type, G VA (fragment); PTPRG, R-PTP gamma, protein tyrosine phosphatase gamma, D3S1 HPTPG, RPTPG, PTPG; 2.40A {Homo sapiens}
Probab=98.40 E-value=1.4e-06 Score=99.75 Aligned_cols=86 Identities=22% Similarity=0.181 Sum_probs=63.8
Q ss_pred eccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHHH-----hcCCCHHHHHHHHHhcCCC
Q 006472 170 QCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMR-----SQSMSVAQAIKKFAEVRPP 244 (643)
Q Consensus 170 p~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~li~aYLm~-----~~g~s~~eAi~~~~~~Rp~ 244 (643)
..+|+|.+++...+..|+..+.. .....+++|+|||.+|+||||++||+.++. ...+++.+++..+|+.|+.
T Consensus 200 ~WPD~gvP~~~~~ll~~i~~~~~---~~~~~~~PivVHCsaGvGRTGtfiaid~~l~~l~~~~~v~v~~~v~~lR~qR~~ 276 (627)
T 2nlk_A 200 QWPDMGVPEYALPVLTFVRRSSA---ARMPETGPVLVHCSAGVGRTGTYIVIDSMLQQIKDKSTVNVLGFLKHIRTQRNY 276 (627)
T ss_dssp CCCSSSSCSCSHHHHHHHHHHHH---TCCSSCCCEEEECSSSSHHHHHHHHHHHHHHHHHHHSEECHHHHHHHHTTTSTT
T ss_pred CCCCCCCCcChHHHHHHHHHHHh---hccCCCceEEEEcCCCCCCccEEEEHHHHHHHHHhCCCCCHHHHHHHHHhhCCC
Confidence 35677554455556666554422 122356899999999999999999987663 2346899999999999999
Q ss_pred ccCCHHHHHHHHHH
Q 006472 245 GIYKNEYIEALYTF 258 (643)
Q Consensus 245 ~i~~~~~l~~L~~~ 258 (643)
.+.+..|...+++.
T Consensus 277 ~Vqt~~Qy~fiy~a 290 (627)
T 2nlk_A 277 LVQTEEQYIFIHDA 290 (627)
T ss_dssp SSCCHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHH
Confidence 99999888776643
No 100
>2nlk_A Protein tyrosine phosphatase, receptor type, G VA (fragment); PTPRG, R-PTP gamma, protein tyrosine phosphatase gamma, D3S1 HPTPG, RPTPG, PTPG; 2.40A {Homo sapiens}
Probab=98.07 E-value=6.9e-06 Score=93.95 Aligned_cols=87 Identities=15% Similarity=0.139 Sum_probs=64.7
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHHH-----hcCCCHHHHHHHHHhcCCCc
Q 006472 171 CKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMR-----SQSMSVAQAIKKFAEVRPPG 245 (643)
Q Consensus 171 ~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~li~aYLm~-----~~g~s~~eAi~~~~~~Rp~~ 245 (643)
.+|+| +|... +..|+..+... ....+++|+|||.+|+||||++||+.++. ...+++.+++..+|+.|+..
T Consensus 494 WPD~g-vP~~~-~~~li~~v~~~---~~~~~~PivVHCsaGiGRtGtf~a~~~~l~~l~~~~~vdv~~~v~~lR~qR~~~ 568 (627)
T 2nlk_A 494 WPNPD-APISS-TFELINVIKEE---ALTRDGPTIVHDEYGAVSAGMLCALTTLSQQLENENAVDVFQVAKMINLMRPGV 568 (627)
T ss_dssp SSCTT-SCGGG-HHHHHHHHHHH---HTTCCSCEEEEESSSCHHHHHHHHHHHHHHHHHHHSEECHHHHHHHHHHHSTTS
T ss_pred CCCCC-cCChh-HHHHHHHHHHh---hccCCCeEEEEeCCCCchHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhhh
Confidence 45664 56433 34455444332 23457899999999999999999988753 23478999999999999999
Q ss_pred cCCHHHHHHHHHHHhcc
Q 006472 246 IYKNEYIEALYTFYHEK 262 (643)
Q Consensus 246 i~~~~~l~~L~~~y~~~ 262 (643)
+.+..|...+++.-...
T Consensus 569 Vqt~~Qy~f~y~~v~~~ 585 (627)
T 2nlk_A 569 FTDIEQYQFIYKAMLSL 585 (627)
T ss_dssp SCSHHHHHHHHHHHHTT
T ss_pred cCCHHHHHHHHHHHHHH
Confidence 99999998888765443
No 101
>1ohe_A CDC14B, CDC14B2 phosphatase; protein phosphatase, cell cycle, hydrolase; HET: SEP; 2.20A {Homo sapiens} SCOP: c.45.1.1 c.45.1.1 PDB: 1ohc_A 1ohd_A
Probab=96.71 E-value=0.0036 Score=66.24 Aligned_cols=69 Identities=10% Similarity=0.116 Sum_probs=58.4
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCC--h--hHHHHHHHHHHhcCCCHHHHHHHHHhcC
Q 006472 172 KGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHN--R--TGYMIVHFLMRSQSMSVAQAIKKFAEVR 242 (643)
Q Consensus 172 ~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~--R--SG~li~aYLm~~~g~s~~eAi~~~~~~R 242 (643)
.|+ .+....++-+|+..+.+.+.... ..+.++|||+.|.. | |++|++||+|-..||++++|+..+....
T Consensus 49 ~df-gp~~~~~~~~~~~~~~~~l~~~~-~~~k~~~~~~~~~~~~r~naa~L~~~y~~~~~~~~~~~a~~~~~~~~ 121 (348)
T 1ohe_A 49 ADF-GPLNLAMVYRYCCKINKKLKSIT-MLRKKIVHFTGSDQRKQANAAFLVGCYMVIYLGRTPEEAYRILIFGE 121 (348)
T ss_dssp SCC-CCCCHHHHHHHHHHHHHHHHCGG-GTTSEEEEEECSCHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHTTTT
T ss_pred hhc-CCccHHHHHHHHHHHHHHHhChh-hcCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCHHHHHHHHHhcC
Confidence 566 47889999999999988877443 34689999999985 4 8999999999999999999999988763
No 102
>1s68_A RNA ligase 2; ribonucleic acid ligase, RNA repair; HET: AMP; 1.90A {Enterobacteria phage T4} SCOP: d.142.2.4
Probab=96.49 E-value=0.013 Score=58.98 Aligned_cols=109 Identities=13% Similarity=0.069 Sum_probs=67.7
Q ss_pred hhcccceeeeecCceeEEEEEEECCEEEEEeCCCccccccCCCCCcCCcc-------cccccC----CCCeEeeEEEEEe
Q 006472 326 LLRQRYYYATWKADGTRYMMLITIDGCYLIDRCFNFRRVQMRFPCRNSNE-------GLGEKT----HHFTLLDGEMIID 394 (643)
Q Consensus 326 ~l~~~~Y~V~eK~DG~R~ll~i~~~~vyLidR~~~~~~v~~~FP~~~~~~-------~~~~~~----~~~tlLDGElV~d 394 (643)
.+....+.|+||.||+-+-+++.++++.+.+|++.+..-+-.++-..... .+.+.. ..+.+|=||++--
T Consensus 24 ~~~~~~vvvtEKldG~N~~i~~~~~~i~~~sR~~~l~~~~~f~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~i~GE~~G~ 103 (249)
T 1s68_A 24 GLTGGEWVAREKIHGTNFSLIIERDKVTCAKRTGPILPAEDFFGYEIILKNYADSIKAVQDIMETSAVVSYQVFGEFAGP 103 (249)
T ss_dssp TCSCSCEEEEECCCSEEEEEEEESSCEEEEETTEECCTTCCCTTTHHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEEST
T ss_pred ccCCCCEEEEEEECCcceEEEEECCEEEEEeCCcccCCCCccchHHHHHHHHHHHHHHHHHHhcccCCCcEEEEEEEccc
Confidence 45666899999999999999888888999999986531111111000000 010111 1567789999953
Q ss_pred cCCCC-CCcceEEEEeEee-ecCCeeccCCCHHHHHHHHHHH
Q 006472 395 KLPDS-RRQERRYLIYDMM-AINQASVIERPFYERWKMLEKE 434 (643)
Q Consensus 395 ~~~~~-~~~~~~yliFDiL-~~~G~~l~~~pf~eR~~~L~~~ 434 (643)
...+. .-....|++|||. ..++.+..-+++.+|..+++..
T Consensus 104 ~Iq~~v~Y~~~~FyvFdI~~~~~~g~~~~l~~~~~~~l~~~~ 145 (249)
T 1s68_A 104 GIQKNVDYCDKDFYVFDIIVTTESGDVTYVDDYMMESFCNTF 145 (249)
T ss_dssp TTSSSCCCCSCEEEEEEEEEEETTCCEEECCHHHHHHHHHHH
T ss_pred cccCCcccCCCeEEEEEEEEecCCCccccCCHHHHHHHHHHC
Confidence 21010 0014589999997 4443334567899999999874
No 103
>2hvq_A ORF1, hypothetical 37.6 kDa protein in GP24-HOC intergenic region; RNA, ligase, lysine adenylate; HET: APK; 2.40A {Enterobacteria phage T4} PDB: 2hvr_A* 2hvs_A*
Probab=96.37 E-value=0.02 Score=60.18 Aligned_cols=110 Identities=12% Similarity=0.055 Sum_probs=68.6
Q ss_pred hhcccceeeeecCceeEEEEEEECCEEEEEeCCCccccccCCCCCcCCcc-------cccccC----CCCeEeeEEEEEe
Q 006472 326 LLRQRYYYATWKADGTRYMMLITIDGCYLIDRCFNFRRVQMRFPCRNSNE-------GLGEKT----HHFTLLDGEMIID 394 (643)
Q Consensus 326 ~l~~~~Y~V~eK~DG~R~ll~i~~~~vyLidR~~~~~~v~~~FP~~~~~~-------~~~~~~----~~~tlLDGElV~d 394 (643)
.+....++|+||.||+-+-+++.++++.+.+|++.+..-.-.|+-..... .+.+.. ..+.+|=||++--
T Consensus 25 ~l~~~~vvvtEKlDG~N~~i~~~~~~i~~~sR~~~l~~~~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~~~i~GE~~G~ 104 (335)
T 2hvq_A 25 GLTGGEWVAREXIHGTNFSLIIERDKVTCAKRTGPILPAEDFFGYEIILKNYADSIKAVQDIMETSAVVSYQVFGEFAGP 104 (335)
T ss_dssp TCSCSCEEEEECCSSEEEEEEEETTEEEEEETTEECCTTCCCTTTHHHHHHHHHHHHHHHTTHHHHTEEEEEEEEEEESB
T ss_pred ccCCCcEEEEEEecCcceEEEEECCEEEEecCCcccCCccccchHHHHHHHHHHHHHHHHHHhhccCCCcEEEEEEEccC
Confidence 45666899999999999999999999999999987531111111110000 110111 1467789999943
Q ss_pred cCCCC-CCcceEEEEeEee-ecCCeeccCCCHHHHHHHHHHHh
Q 006472 395 KLPDS-RRQERRYLIYDMM-AINQASVIERPFYERWKMLEKEV 435 (643)
Q Consensus 395 ~~~~~-~~~~~~yliFDiL-~~~G~~l~~~pf~eR~~~L~~~v 435 (643)
...++ .-....|++|||. ..++..-.-+|+.+|..+++..-
T Consensus 105 ~Iq~~i~Y~~~~FyvFDI~~~~~~~~~~~l~~~~~~~l~~~~g 147 (335)
T 2hvq_A 105 GIQKNVDYGDKDFYVFDIIVTTESGDVTYVDDYMMESFCNTFK 147 (335)
T ss_dssp TTBSSCCCCSSEEEEEEEEEEETTCCEEECCHHHHHHHHHHHT
T ss_pred cccCCcccCCCeEEEEEEEEecCCCceeeCCHHHHHHHHHHcC
Confidence 21000 0014589999997 43443345689999999998853
No 104
>1ta8_A DNA ligase, NAD-dependent; nucleotidyl transferase fold; HET: DNA NMN; 1.80A {Enterococcus faecalis} SCOP: d.142.2.2 PDB: 3ba8_A* 1tae_A* 3ba9_A* 3baa_A* 3bab_A*
Probab=95.07 E-value=0.22 Score=52.03 Aligned_cols=158 Identities=14% Similarity=0.125 Sum_probs=90.1
Q ss_pred ceeeeecCceeEEEEEEECCE-EEEEeCCCccc--cccCCCCCcCC-cccccccCCCCeEeeEEEEEecC----------
Q 006472 331 YYYATWKADGTRYMMLITIDG-CYLIDRCFNFR--RVQMRFPCRNS-NEGLGEKTHHFTLLDGEMIIDKL---------- 396 (643)
Q Consensus 331 ~Y~V~eK~DG~R~ll~i~~~~-vyLidR~~~~~--~v~~~FP~~~~-~~~~~~~~~~~tlLDGElV~d~~---------- 396 (643)
.|++++|.||..+-|...++. +..++|.+-.. .|+.......+ +..+. ......+-||++..+.
T Consensus 114 ~~~~EpKiDGlaisL~Ye~G~Lv~a~TRGDG~~GEDVT~nvrtI~~IP~~L~--~p~~leVRGEv~m~~~~F~~lN~~~~ 191 (332)
T 1ta8_A 114 AYCCELKIDGLAISLRYENGVFVRGATRGDGTVGENITENLRTVRSVPMRLT--EPISVEVRGECYMPKQSFVALNEERE 191 (332)
T ss_dssp CEEEEEEECSEEEEEEEETTEEEEEEECTTSSEEEBCHHHHTTCTTSCSBCS--SCCCEEEEEEEECCHHHHHHHHHHHH
T ss_pred eEEEeeeecceEEEEEEECCEEEEEEcCCCCccchhHHHHHHHhcCCccccC--CCCeEEEEEEEEEEHHHHHHHHHHHH
Confidence 499999999999988888776 68999953211 12111110100 11121 1234789999998431
Q ss_pred --CCC---------------------CCcceEEEEeEeeecCCeeccCCCHHHHHHHHHHHhcCccccccccccccCCCC
Q 006472 397 --PDS---------------------RRQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNPY 453 (643)
Q Consensus 397 --~~~---------------------~~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~v~~p~~~~~~~~~~~~~p~ 453 (643)
++. ....+.|++|++...+|... ....+++..|.++-+.. +|.
T Consensus 192 ~~g~~~faNPRNaAAGsLrqld~~ita~R~L~ff~y~i~~~~~~~~--~t~~e~l~~L~~~GF~v------------~~~ 257 (332)
T 1ta8_A 192 ENGQDIFANPRNAAAGSLRQLDTKIVAKRNLNTFLYTVADFGPMKA--KTQFEALEELSAIGFRT------------NPE 257 (332)
T ss_dssp HTTCCCCSSHHHHHHHHHTCSBHHHHHTSCCEEEEEEESCCTTCCC--SBHHHHHHHHHHTTCCC------------CTT
T ss_pred hcCCccccChHHHHHHHHHccChhhHhhCCCEEEEEecccccCCCC--CCHHHHHHHHHHcCCCC------------CCc
Confidence 110 02468999999964444332 57889999998854321 111
Q ss_pred ccCCCCCcEEEecceeechhHHHHHHHh---cccccCCCceEEEEeCCCCCc------cCCCCCeEEEecC
Q 006472 454 YRYDLEPFRVRRKDFWLLSTVNKLLKEF---IPKLSHDADGLVFQGWDDPYV------PRTHEGLLKWKYA 515 (643)
Q Consensus 454 ~~~~~~pf~I~~K~~~~~~~~~~ll~~~---~~~l~h~~DGLIf~p~~spY~------~G~~~~llKWKP~ 515 (643)
. -. +-.+..+...++.+ ...+++..||||++-.+.++. ......-+=||+|
T Consensus 258 ~--------~~---~~~~~ev~~~~~~~~~~R~~l~y~iDGvViKvn~~~~q~~LG~tsk~PRWAiAyKfp 317 (332)
T 1ta8_A 258 R--------QL---CQSIDEVWAYIEEYHEKRSTLPYEIDGIVIKVNEFALQDELGFTVKAPRWAIAYKFP 317 (332)
T ss_dssp C--------EE---ESSHHHHHHHHHHHHHTGGGSSSCEEEEEEEESBHHHHHHHCBCSSSBSSEEEEECC
T ss_pred c--------eE---eCCHHHHHHHHHHHHHHHhcCCCCCCcEEEEecCHHHHHHhCCcCCCCCceeEecCC
Confidence 0 01 11122333333332 457899999999998665543 2223455666665
No 105
>1b04_A Protein (DNA ligase); DNA replication; 2.80A {Geobacillus stearothermophilus} SCOP: d.142.2.2
Probab=94.31 E-value=0.25 Score=51.30 Aligned_cols=159 Identities=14% Similarity=0.121 Sum_probs=88.6
Q ss_pred ceeeeecCceeEEEEEEECCE-EEEEeCCCccc--cccCCCCCcCC-cccccccCCCCeEeeEEEEEecC----------
Q 006472 331 YYYATWKADGTRYMMLITIDG-CYLIDRCFNFR--RVQMRFPCRNS-NEGLGEKTHHFTLLDGEMIIDKL---------- 396 (643)
Q Consensus 331 ~Y~V~eK~DG~R~ll~i~~~~-vyLidR~~~~~--~v~~~FP~~~~-~~~~~~~~~~~tlLDGElV~d~~---------- 396 (643)
.|++++|.||..+-|...++. +..++|.+-.. .|+.......+ +..+. ......+-||++..+.
T Consensus 108 ~~~~EpKiDGlaisL~Ye~G~Lv~a~TRGDG~~GEDVT~nvrtI~~IP~~L~--~p~~levRGEv~m~~~~F~~lN~~~~ 185 (318)
T 1b04_A 108 AYVCELAIDGLAVSVRYEDGYFVQGATRGDGTTGEDITENLKTIRSLPLRLK--EPVSLEARGEAFMPKASFLRLNEERK 185 (318)
T ss_dssp CEEEEEEESSEEEEEEEETTEEEEEEECTTSSCEEBCHHHHHTCTTSCSBCS--SCCCEEEEEEEECCHHHHHHHHHHHH
T ss_pred eEEEEEecccEEEEEEEECCEEEEEEccCCCcccHHHHHhHHHhcCCCcccC--CCCeEEEEEEEEEEHHHHHHHHHHHH
Confidence 599999999999988777664 57899953211 11111100000 01121 1234789999998431
Q ss_pred --CCC---------------------CCcceEEEEeEeeecCCeeccCCCHHHHHHHHHHHhcCccccccccccccCCCC
Q 006472 397 --PDS---------------------RRQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNPY 453 (643)
Q Consensus 397 --~~~---------------------~~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~v~~p~~~~~~~~~~~~~p~ 453 (643)
++. ....+.|++|++...+|... ....+++..|.++-+.. +|.
T Consensus 186 ~~g~~~faNpRNaAAGsLrqld~~ita~R~L~ff~y~~~~~~~~~~--~t~~e~l~~L~~~Gf~v------------~~~ 251 (318)
T 1b04_A 186 ARGEELFANPRNAAAGSLRQLDPKVAASRQLDLFVYGLADAEALGI--ASHSEALDYLQALGFKV------------NPE 251 (318)
T ss_dssp HC--CCCSCHHHHHHHHHHSSCHHHHHHTCCEEEEEEETTTTTTTC--CBHHHHHHHHHHTTCCC------------CTT
T ss_pred HcCCCccchhhHHHHHHHHccChhhHhhCCCEEEEEecccccCCCC--CCHHHHHHHHHHcCCCC------------CCc
Confidence 100 02468999999954434222 57889999998854321 111
Q ss_pred ccCCCCCcEEEecceeechhHHHHHHHh---cccccCCCceEEEEeCCCCCc------cCCCCCeEEEecCC
Q 006472 454 YRYDLEPFRVRRKDFWLLSTVNKLLKEF---IPKLSHDADGLVFQGWDDPYV------PRTHEGLLKWKYAR 516 (643)
Q Consensus 454 ~~~~~~pf~I~~K~~~~~~~~~~ll~~~---~~~l~h~~DGLIf~p~~spY~------~G~~~~llKWKP~~ 516 (643)
. -. +-.+..+...++.+ ...+++..||||++-.+.++. ......-+=||+|.
T Consensus 252 ~--------~~---~~~~~ev~~~~~~~~~~R~~l~y~iDGvViKvn~~~~q~~LG~t~k~PRWAiA~Kfpa 312 (318)
T 1b04_A 252 R--------RR---CANIDEVIAFVSEWHDKRPQLPYEIDGIVIKVDSFAQQRALGATAKSPRWAIAYKFPA 312 (318)
T ss_dssp C--------EE---ESSHHHHHHHHHHHHHHSTTCSSCEEEEEEEECBHHHHHHHCCCSSSCTTEEEEECCC
T ss_pred c--------eE---eCCHHHHHHHHHHHHHHHhhCCCCCCcEEEEecCHHHHHHhCCcCCCCCceeeecCCc
Confidence 0 01 11122333333332 457889999999997665543 22234455566553
No 106
>4glw_A DNA ligase; inhibitor, ligase-ligase inhibitor complex; HET: DNA 0XT NMN; 2.00A {Streptococcus pneumoniae}
Probab=93.17 E-value=1.5 Score=45.22 Aligned_cols=157 Identities=14% Similarity=0.134 Sum_probs=87.8
Q ss_pred cccceeeeecCceeEEEEEEECCE-EEEEeCCCccc--ccc--CC-CCCcCCcccccccCCCCeEeeEEEEEecC-----
Q 006472 328 RQRYYYATWKADGTRYMMLITIDG-CYLIDRCFNFR--RVQ--MR-FPCRNSNEGLGEKTHHFTLLDGEMIIDKL----- 396 (643)
Q Consensus 328 ~~~~Y~V~eK~DG~R~ll~i~~~~-vyLidR~~~~~--~v~--~~-FP~~~~~~~~~~~~~~~tlLDGElV~d~~----- 396 (643)
....|++++|.||.-+.|...++. +..++|.+-.. .++ +. .+.. +..+ .......+=||++..+.
T Consensus 100 ~~~~~~~epKiDGlavsL~Y~~G~L~~a~TRGDG~~GeDiT~n~~tI~~I--P~~l--~~~~~levRGEv~m~~~~F~~~ 175 (305)
T 4glw_A 100 AHPTYICELKIDGLSISLTYEKGILVAGVTRGDGSIGENITENLKRVKDI--PLTL--PEELDITVRGECYMPRASFDQV 175 (305)
T ss_dssp SSCCEEEEEEECSEEEEEEEETTEEEEEEECTTSSEEEECHHHHTTSTTS--CSBC--SSCCCEEEEEEEECCHHHHHHH
T ss_pred CCCcEEEEeeecceEEEEEEeCCeEEEEEecCCCcchhhHHHHHhhccCC--cccC--CCcccccccceEEeehhhHHHH
Confidence 345799999999999887777665 67899974211 111 11 1100 0111 11234678999998421
Q ss_pred -------CCC---------------------CCcceEEEEeEeeecCCeeccCCCHHHHHHHHHHHhcCccccccccccc
Q 006472 397 -------PDS---------------------RRQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQ 448 (643)
Q Consensus 397 -------~~~---------------------~~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~v~~p~~~~~~~~~~ 448 (643)
+.. ....+.|++|++...+|. ....+++..|.++-..
T Consensus 176 n~~~~~~g~~~faNpRNaaAGslrq~d~~~~~~r~L~f~~y~~~~~~~~----~s~~e~l~~L~~~Gf~----------- 240 (305)
T 4glw_A 176 NQARQENGEPEFANPRNAAAGTLRQLDTAVVAKRNLATFLYQEASPSTR----DSQEKGLKYLEQLGFV----------- 240 (305)
T ss_dssp HHHHHHTTCCCCSSHHHHHHHHHSSSBHHHHHHSCCEEEEEEESSSCSS----SBHHHHHHHHHHHTCC-----------
T ss_pred HHHHHhcCCccchhhhHHHhhhhhccCchhhhhhcceEEEeeecccccc----chHHHHHHHHHhCCCc-----------
Confidence 100 013588999998766553 3567888888875431
Q ss_pred cCCCCccCCCCCcEEEecceeechhHHHHHHH---hcccccCCCceEEEEeCCCC------CccCCCCCeEEEecC
Q 006472 449 SRNPYYRYDLEPFRVRRKDFWLLSTVNKLLKE---FIPKLSHDADGLVFQGWDDP------YVPRTHEGLLKWKYA 515 (643)
Q Consensus 449 ~~~p~~~~~~~pf~I~~K~~~~~~~~~~ll~~---~~~~l~h~~DGLIf~p~~sp------Y~~G~~~~llKWKP~ 515 (643)
.+|.. ...+ .+..+...++. .-..+++..||||++-.+-+ |+.+....-+=||+|
T Consensus 241 -~~~~~--------~~~~---~~~ev~~~~~~~~~~R~~l~y~iDGiVikvn~~~~q~~lG~tsk~PrWAiA~Kfp 304 (305)
T 4glw_A 241 -VNPKR--------ILAE---NIDEIWNFIQEVGQERENLPYDIDGVVIKVNDLASQEELGFTVKAPKWAVAYKFP 304 (305)
T ss_dssp -CCCCC--------EEES---SHHHHHHHHHHHHHHGGGSSSCEEEEEEEECBHHHHHHHCBCSSSBSSEEEEECC
T ss_pred -cCCce--------EEeC---CHHHHHHHHHHHHHHhhcCCCCCCeEEEEEeCHHHHHHcCCcCCCCCceEEeCcc
Confidence 11110 1111 12222222222 23578899999999954332 333333455677765
No 107
>4glx_A DNA ligase; inhibitor, ligase-ligase inhibitor-DNA complex; HET: DNA 0XS; 1.90A {Escherichia coli}
Probab=92.47 E-value=2.9 Score=46.86 Aligned_cols=161 Identities=15% Similarity=0.156 Sum_probs=91.6
Q ss_pred cceeeeecCceeEEEEEEECCE-EEEEeCCCccc--ccc---C---CCCCcCCcccccccCCCCeEeeEEEEEecC----
Q 006472 330 RYYYATWKADGTRYMMLITIDG-CYLIDRCFNFR--RVQ---M---RFPCRNSNEGLGEKTHHFTLLDGEMIIDKL---- 396 (643)
Q Consensus 330 ~~Y~V~eK~DG~R~ll~i~~~~-vyLidR~~~~~--~v~---~---~FP~~~~~~~~~~~~~~~tlLDGElV~d~~---- 396 (643)
-.|++++|.||.-+.|...++. +..++|.+-.. .++ . ..|.... + ........+=||++..+.
T Consensus 108 ~~~~~epKiDGlavsL~Ye~G~Lv~a~TRGDG~~GeDiT~nvrtI~~IPl~l~--~--~~~p~~leVRGEv~m~~~~F~~ 183 (586)
T 4glx_A 108 VTWCCELKLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLH--G--ENIPARLEVRGEVFLPQAGFEK 183 (586)
T ss_dssp -CEEEEEEESSEEEEEEEETTEEEEEEECTTSSEEEBCHHHHTTCTTSCSBCC--S--SSCCSEEEEEEEEECCHHHHHH
T ss_pred ceEEEEEeecceEEEEEEeCCEEEEEEccCCCcccccHHHHHHhccCcccccc--c--CCCCceEEEEEEEEEEhhhccc
Confidence 4799999999999887777665 68999964321 111 1 1121110 0 011234677899997431
Q ss_pred --------CCC---------------------CCcceEEEEeEeeecCCeeccCCCHHHHHHHHHHHhcCcccccccccc
Q 006472 397 --------PDS---------------------RRQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIY 447 (643)
Q Consensus 397 --------~~~---------------------~~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~v~~p~~~~~~~~~ 447 (643)
++. ....+.|++|++..++|.++. ....+++..|+++-..
T Consensus 184 ln~~~~~~g~~~faNpRNaaAGslrqld~~~~a~r~L~f~~y~v~~~~~~~~~-~t~~e~l~~L~~~Gf~---------- 252 (586)
T 4glx_A 184 INEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELP-DTHLGRLLQFKKWGLP---------- 252 (586)
T ss_dssp HHHHHHHTTCCCCSCHHHHHHHHHTCSCHHHHHTSCCEEEEEEEEEEESSCCC-SBHHHHHHHHHHTTCC----------
T ss_pred cchhhhhccCccchhhHHHHhccccccchhhhhccccceeEeeeeeeeccccc-ccHHHHHHHHHHcCCC----------
Confidence 010 024689999999988876543 2467888888875321
Q ss_pred ccCCCCccCCCCCcEEEecceeechhHHHHHH---HhcccccCCCceEEEEeCCCC------CccCCCCCeEEEecCCCc
Q 006472 448 QSRNPYYRYDLEPFRVRRKDFWLLSTVNKLLK---EFIPKLSHDADGLVFQGWDDP------YVPRTHEGLLKWKYARMN 518 (643)
Q Consensus 448 ~~~~p~~~~~~~pf~I~~K~~~~~~~~~~ll~---~~~~~l~h~~DGLIf~p~~sp------Y~~G~~~~llKWKP~~~n 518 (643)
.++.+ -..+ .+..+...++ .....+++..||||++-.+-. |+.+....-+=||+|...
T Consensus 253 --v~~~~--------~~~~---~~~~~~~~~~~~~~~R~~l~y~iDGiVikvn~~~~~~~lG~ts~~PrwAiA~Kfp~e~ 319 (586)
T 4glx_A 253 --VSDRV--------TLCE---SAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQE 319 (586)
T ss_dssp --CCTTC--------EEES---SHHHHHHHHHHHHHHGGGSSSCEEEEEEEESBHHHHHHHCBCSSSBSSEEEECCCCCE
T ss_pred --Cccce--------eeec---cHHHHHHHHHHHHHhhhcccccCCceEEEecchhhhhccCCccCCCCeeEEEcccchh
Confidence 11111 1111 1122222222 223578999999999964432 333334556777877554
No 108
>3jsl_A DNA ligase; NAD+-dependent, DNA damage, DNA repair, DNA replication, magnesium, manganese, metal-binding, NAD, zinc; HET: DNA; 1.80A {Staphylococcus aureus} SCOP: d.142.2.2 PDB: 3jsn_A*
Probab=91.89 E-value=2.2 Score=44.21 Aligned_cols=157 Identities=15% Similarity=0.148 Sum_probs=88.8
Q ss_pred cceeeeecCceeEEEEEEECCE-EEEEeCCCccc--ccc--C-CCCCcCCcccccccCCCCeEeeEEEEEecC-------
Q 006472 330 RYYYATWKADGTRYMMLITIDG-CYLIDRCFNFR--RVQ--M-RFPCRNSNEGLGEKTHHFTLLDGEMIIDKL------- 396 (643)
Q Consensus 330 ~~Y~V~eK~DG~R~ll~i~~~~-vyLidR~~~~~--~v~--~-~FP~~~~~~~~~~~~~~~tlLDGElV~d~~------- 396 (643)
-.|++++|.||.-+-|...++. +..++|.+-.. .|+ + ..+.. +..+ .......+=||++..+.
T Consensus 105 ~~~~~EpKiDGlaisL~Ye~G~Lv~a~TRGDG~~GEDVT~nvrtI~~I--P~~L--~~~~~levRGEv~m~~~~F~~lN~ 180 (318)
T 3jsl_A 105 VEYMCELKIDGLAVSLKYVDGYFVQGLTRGDGTTGEDITENLKTIHAI--PLKM--KEPLNVEVRGEAYMPRRSFLRLNE 180 (318)
T ss_dssp CCEEEEEEECSEEEEEEEETTEEEEEEECTTSSEEEBCHHHHTTCTTS--CSBC--SSCCCEEEEEEEECCHHHHHHHHH
T ss_pred ceEEEEEeecceEEEEEEECCEEEEEEeCCCCccchhHHHHHHHhcCC--cccc--CCCCcEEEEEEEEEcHHHHHHHHH
Confidence 3899999999999987777664 57999963211 111 1 11100 0111 01124778999998421
Q ss_pred -----CCC---------------------CCcceEEEEeEeeecCCeeccCCCHHHHHHHHHHHhcCccccccccccccC
Q 006472 397 -----PDS---------------------RRQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSR 450 (643)
Q Consensus 397 -----~~~---------------------~~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~v~~p~~~~~~~~~~~~ 450 (643)
+.. ....+.|++|.+...+|... ....+++..|.++-+.-
T Consensus 181 ~~~~~g~~~faNPRNaAAGsLRqld~~ita~R~L~ff~y~~~~~~~~~~--~t~~e~l~~L~~~GF~v------------ 246 (318)
T 3jsl_A 181 EKEKNDEQLFANPRNAAAGSLRQLDSKLTAKRKLSVFIYSVNDFTDFNA--RSQSEALDELDKLGFTT------------ 246 (318)
T ss_dssp HHBTTBCCCCSSHHHHHHHHHSCSCHHHHHHSCCEEEEEEESCCTTCCC--SBHHHHHHHHHHHTCCC------------
T ss_pred HHHHhCCccccChHHHHHHHHHccChhhhhhCcceEEEEecccccCCCC--CCHHHHHHHHHHCCCCc------------
Confidence 100 02468999999987766433 46788999998864321
Q ss_pred CCCccCCCCCcEEEecceeechhHHHHHHH---hcccccCCCceEEEEeCCCC------CccCCCCCeEEEecC
Q 006472 451 NPYYRYDLEPFRVRRKDFWLLSTVNKLLKE---FIPKLSHDADGLVFQGWDDP------YVPRTHEGLLKWKYA 515 (643)
Q Consensus 451 ~p~~~~~~~pf~I~~K~~~~~~~~~~ll~~---~~~~l~h~~DGLIf~p~~sp------Y~~G~~~~llKWKP~ 515 (643)
+|.. -. +-.+..+...++. ....+++..||||++=.+-. |+......-+=||+|
T Consensus 247 ~~~~--------~~---~~~~~ev~~~~~~~~~~R~~l~y~iDGvViKvn~~~~q~~LG~t~k~PRWAiAyKfp 309 (318)
T 3jsl_A 247 NKNR--------AR---VNNIDGVLEYIEKWTSQRESLPYDIDGIVIKVNDLDQQDEMGFTQKSPRWAIAYKFP 309 (318)
T ss_dssp CTTC--------EE---ESSHHHHHHHHHHHHHHGGGSSSCEEEEEEEESBHHHHHHHCBCSSSBTTEEEEECC
T ss_pred CCcc--------eE---eCCHHHHHHHHHHHHHHHhcCCCCCCcEEEEEeCHHHHHHhCCCCCCCCceEEECCC
Confidence 1110 11 1122233333332 34578999999999975543 332223445556655
No 109
>3uq8_A DNA ligase; adenylated protein, ATP-grAsp, rossman fold, adenylation; HET: DNA NAD AMP; 1.70A {Haemophilus influenzae} PDB: 3pn1_A* 3bac_A*
Probab=89.80 E-value=3.8 Score=42.46 Aligned_cols=158 Identities=15% Similarity=0.132 Sum_probs=88.9
Q ss_pred ceeeeecCceeEEEEEEECCE-EEEEeCCCccc--ccc--C----CCCCcCCcccccccCCCCeEeeEEEEEecC-----
Q 006472 331 YYYATWKADGTRYMMLITIDG-CYLIDRCFNFR--RVQ--M----RFPCRNSNEGLGEKTHHFTLLDGEMIIDKL----- 396 (643)
Q Consensus 331 ~Y~V~eK~DG~R~ll~i~~~~-vyLidR~~~~~--~v~--~----~FP~~~~~~~~~~~~~~~tlLDGElV~d~~----- 396 (643)
.|++++|.||.-+-|...++. +..++|..-.. .|+ + ..|..-. + +.......+=||++..+.
T Consensus 108 ~~~~EpKiDGlaisL~Ye~G~Lv~a~TRGDG~~GEDVT~nvrtI~~IPl~L~--~--~~~p~~leVRGEv~m~~~~F~~l 183 (322)
T 3uq8_A 108 TFCCEPKLDGLAVSILYVNGELTQAATRGDGTTGEDITANIRTIRNVPLQLL--T--DNPPARLEVRGEVFMPHAGFERL 183 (322)
T ss_dssp EEEEEEEESSEEEEEEEETTEEEEEEECTTSSEEEBCHHHHHTCTTSCSBCS--C--SSCCSEEEEEEEEECCHHHHHHH
T ss_pred eEEEEEeeceEEEEEEEeCCEEEEEEecCCCccchhHHHHHHHhcCCCcccc--C--CCCCceEEEEEEEEeeHHHHHHH
Confidence 599999999999987777665 57999963211 111 1 1121110 0 001234678999998431
Q ss_pred -------CCC---------------------CCcceEEEEeEeeecCCeeccCCCHHHHHHHHHHHhcCccccccccccc
Q 006472 397 -------PDS---------------------RRQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQ 448 (643)
Q Consensus 397 -------~~~---------------------~~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~v~~p~~~~~~~~~~ 448 (643)
++. ....+.|++|.+...+|... .....+++..|.++-..-
T Consensus 184 N~~~~~~g~~~faNPRNaAAGsLRqld~~ita~R~L~ff~y~~~~~~~~~~-~~t~~e~l~~L~~~Gf~v---------- 252 (322)
T 3uq8_A 184 NKYALEHNEKTFANPRNAAAGSLRQLDPNITSKRPLVLNAYGIGIAEGVDL-PTTHYARLQWLKSIGIPV---------- 252 (322)
T ss_dssp HHHHHHTTCCCCSSHHHHHHHHHTCSCHHHHTTSCCEEEEEEEEEEESCCC-CSBHHHHHHHHHHTTCCC----------
T ss_pred HHHHHHhCCccccchhHHHHHHHhhcChhhhhcCccEEEEEeccccCCCCC-CCCHHHHHHHHHHcCCCC----------
Confidence 110 12468999999987666432 246788999998754311
Q ss_pred cCCCCccCCCCCcEEEecceeechhHHHHHHH---hcccccCCCceEEEEeCCCCC------ccCCCCCeEEEecCC
Q 006472 449 SRNPYYRYDLEPFRVRRKDFWLLSTVNKLLKE---FIPKLSHDADGLVFQGWDDPY------VPRTHEGLLKWKYAR 516 (643)
Q Consensus 449 ~~~p~~~~~~~pf~I~~K~~~~~~~~~~ll~~---~~~~l~h~~DGLIf~p~~spY------~~G~~~~llKWKP~~ 516 (643)
+|. ... +-.+..+...++. ....+++..||||++=.+-++ +......-+=||+|.
T Consensus 253 --~~~--------~~~---~~~~~ev~~~~~~~~~~R~~l~y~iDGvViKvn~~~~q~~LG~t~k~PRWAiA~Kfpa 316 (322)
T 3uq8_A 253 --NPE--------IRL---CNGADEVLGFYRDIQNKRSSLGYDIDGTVLKINDIALQNELGFISKAPRWAIAYKFPA 316 (322)
T ss_dssp --CTT--------CEE---EESHHHHHHHHHHHHHTTTTTSSCEEEEEEEESBHHHHHHHCEETTEETTEEEEECCC
T ss_pred --CCC--------cEE---eCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEecCHHHHHHcCccCCCCCceEEEcCCc
Confidence 111 011 1122333333333 345789999999999755443 222234555666553
No 110
>1xdn_A RNA editing ligase MP52; HET: MSE ATP; 1.20A {Trypanosoma brucei} SCOP: d.142.2.4
Probab=87.69 E-value=2.9 Score=42.12 Aligned_cols=107 Identities=17% Similarity=0.114 Sum_probs=63.3
Q ss_pred hhcccceeeeecCceeEEEEEE--ECCE--EEEEeCCCccccccCCCC-------CcC----Cc-ccccc----cCCCCe
Q 006472 326 LLRQRYYYATWKADGTRYMMLI--TIDG--CYLIDRCFNFRRVQMRFP-------CRN----SN-EGLGE----KTHHFT 385 (643)
Q Consensus 326 ~l~~~~Y~V~eK~DG~R~ll~i--~~~~--vyLidR~~~~~~v~~~FP-------~~~----~~-~~~~~----~~~~~t 385 (643)
-+....|+|+||.||.-+-+++ +++. +..-.|++-+- .+-.|- ... .. +.+.+ ......
T Consensus 29 ~l~~~ewvatEKIHGaNFsii~~~d~~~~~i~~akRs~~l~-~~e~FfGy~~i~~~l~~~~~~l~~~l~~~~~~~~~~~v 107 (277)
T 1xdn_A 29 GLAAQEWVACEKVHGTNFGIYLINQGDHEVVRFAKRSGIMD-PNENFFGYHILIDEFTAQIRILNDLLKQKYGLSRVGRL 107 (277)
T ss_dssp TGGGSCEEEEEECCSEEEEEEEEEETTEEEEEEEETTEECC-TTCCCTTGGGGHHHHHHHHHHHHHHHHHHHTCSCCSEE
T ss_pred CCCCCcEEEEEeeccccEEEEEecCCCeeEEEEeecccccC-cccccccHHHHHHHHHHHHHHHHHHHHHhhccCCccEE
Confidence 3456689999999999998888 6666 78888886421 111111 000 00 00000 012456
Q ss_pred EeeEEEEEec---------------CCC---------CCC-------cceEEEEeEeeecCC---eeccCCCHHHHHHHH
Q 006472 386 LLDGEMIIDK---------------LPD---------SRR-------QERRYLIYDMMAINQ---ASVIERPFYERWKML 431 (643)
Q Consensus 386 lLDGElV~d~---------------~~~---------~~~-------~~~~yliFDiL~~~G---~~l~~~pf~eR~~~L 431 (643)
++=||+.--. .+. -++ ....|++|||...++ .+..-++|.+=...+
T Consensus 108 ~VyGELfGg~y~hp~v~~~~~~~~~~~~~~~p~~~~~IQ~~i~~~Y~p~~~FYaFDI~~~~~~~~~~~~~L~fd~~~~~~ 187 (277)
T 1xdn_A 108 VLNGELFGAKYKHPLVPKSEKWCTLPNGKKFPIAGVQIQREPFPQYSPELHFFAFDIKYSVSGAEEDFVLLGYDEFVEFS 187 (277)
T ss_dssp EEEEEEEEEECCCTTSCCCCCEEECTTSCEEEGGGCCSCCCSSCCCEEEEEEEEEEEEEESSCCGGGEEECCHHHHHHHH
T ss_pred EEEEEEecCccCCccccccccccccCccccCcccccccccccccccCCCceEEEEEEEEecCCCccccccCCHHHHHHHH
Confidence 7899998532 000 011 146799999998753 234578888777666
Q ss_pred HH
Q 006472 432 EK 433 (643)
Q Consensus 432 ~~ 433 (643)
.+
T Consensus 188 ~~ 189 (277)
T 1xdn_A 188 SK 189 (277)
T ss_dssp HT
T ss_pred HH
Confidence 65
No 111
>1zau_A DNA ligase; AMP; HET: DNA AMP; 3.15A {Mycobacterium tuberculosis}
Probab=84.15 E-value=0.51 Score=49.17 Aligned_cols=146 Identities=14% Similarity=0.087 Sum_probs=80.8
Q ss_pred cceeeeecCceeEEEEEEECCE-EEEEeCCCccc--ccc-----C-CCCCcCCcccccccCCCCeEeeEEEEEecC----
Q 006472 330 RYYYATWKADGTRYMMLITIDG-CYLIDRCFNFR--RVQ-----M-RFPCRNSNEGLGEKTHHFTLLDGEMIIDKL---- 396 (643)
Q Consensus 330 ~~Y~V~eK~DG~R~ll~i~~~~-vyLidR~~~~~--~v~-----~-~FP~~~~~~~~~~~~~~~tlLDGElV~d~~---- 396 (643)
..|++++|.||..+-|...++. +..++|.+-.. .|+ + ..|..-. .+-.........+-||++..+.
T Consensus 116 ~~~~~EpKiDGlaisL~Ye~G~Lv~a~TRGDG~~GEDVT~nvrtI~~IP~~L~-~g~~~~~p~~leVRGEv~m~~~~F~~ 194 (328)
T 1zau_A 116 AHYLCELKIDGVALSLVYREGRLTRASTRGDGRTGEDVTLNARTIADVPERLT-PGDDYPVPEVLEVRGEVFFRLDDFQA 194 (328)
T ss_dssp SCEEEEEEECSEEEEEECGGGBCCBCBBCTTSSEECBCHHHHHHSSSCCSBCC-CBTTBCCCSCCEEEEEEBCCHHHHHH
T ss_pred cceEEeeecceEEEEEEEECCEEEEEEccCCCcccHHHHHHHHHhcCCChhhc-cCCcCCCCCeEEEEEEEEEEHHHHHH
Confidence 3699999999999977766553 57888953211 111 0 1121110 0000001234789999997431
Q ss_pred --------CCC-----------------C----CcceEEEEeEeeecCCeeccCCCHHHHHHHHHHHhcCcccccccccc
Q 006472 397 --------PDS-----------------R----RQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIY 447 (643)
Q Consensus 397 --------~~~-----------------~----~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~v~~p~~~~~~~~~ 447 (643)
++. . +..+.|++|++..+++... ....+++..|.++-+..
T Consensus 195 lN~~~~~~g~~~faNPRNaAAGsLrqld~~ita~R~L~f~~y~i~~~~~~~~--~t~~e~l~~L~~~Gf~v--------- 263 (328)
T 1zau_A 195 LNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGHVEGFRP--ATLHQAYLALRAWGLPV--------- 263 (328)
T ss_dssp HHHSCSSTTSCCCSSHHHHHHHHHTCSSHHHHHHSCCBCCCCBCCCCSSCCC--SBHHHHHHHHHTTTCCC---------
T ss_pred HHHHHHHcCCccccChHHHHHHHHHccChhhhhcCcceEEEEeccccCCCCC--CCHHHHHHHHHHcCCCC---------
Confidence 100 0 1358899999965554322 56888998888754321
Q ss_pred ccCCCCccCCCCCcEEEecceeechhHHHHHHHh---cccccCCCceEEEEeCCCCC
Q 006472 448 QSRNPYYRYDLEPFRVRRKDFWLLSTVNKLLKEF---IPKLSHDADGLVFQGWDDPY 501 (643)
Q Consensus 448 ~~~~p~~~~~~~pf~I~~K~~~~~~~~~~ll~~~---~~~l~h~~DGLIf~p~~spY 501 (643)
+|.. +-+-.+..+...++.+ ...+++..||||++-.+..+
T Consensus 264 ---~~~~-----------~~~~~~~ev~~~~~~~~~~R~~l~y~iDGvViKvn~~~~ 306 (328)
T 1zau_A 264 ---SEHT-----------TLATDLAGVRERIDYWGEHRHEVDHEIDGVVVKVDEVAL 306 (328)
T ss_dssp ---CCCC-----------CCBCHHHHHHHHHHHTTTTCSSCSSCEEEEEEEECBHHH
T ss_pred ---CCce-----------EEeCCHHHHHHHHHHHHHHHhcCCCCCceEEEEecCHHH
Confidence 1110 0011223333444443 35688999999999765544
No 112
>1vee_A Proline-rich protein family; hypothetical protein, structural genomics, rhodanese domain, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} PDB: 2dcq_A
Probab=83.32 E-value=2 Score=38.20 Aligned_cols=85 Identities=12% Similarity=0.182 Sum_probs=45.2
Q ss_pred CCHHHHHHHHHHcCCCeeEEEEcCCCCCCCCcchhccCCcE--------EEEeeccCCCCCCCHHHHHHHHHHHHHHHHh
Q 006472 125 YSFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEGIK--------HVKIQCKGRDAVPDNASVNNFVYEVTQFLSR 196 (643)
Q Consensus 125 ~~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~~gI~--------y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~ 196 (643)
.++.++.+.+... .++ .|||+.. +.++...|+. -+++|... .+ ...|...+...+.
T Consensus 7 is~~e~~~~l~~~-~~~-~liDVR~------~~E~~~~~~~~~~g~~~ga~~ip~~~---~~----~~~~~~~l~~~~~- 70 (134)
T 1vee_A 7 GSAKNAYTKLGTD-DNA-QLLDIRA------TADFRQVGSPNIKGLGKKAVSTVYNG---ED----KPGFLKKLSLKFK- 70 (134)
T ss_dssp CCHHHHHHHHHHC-TTE-EEEECSC------HHHHHHTCEECCTTTSCCCEECCCCG---GG----HHHHHHHHHTTCS-
T ss_pred cCHHHHHHHHHhC-CCe-EEEEcCC------HHHHhhcCCCcccccCCceEEeeccc---cc----ChhHHHHHHHHhC-
Confidence 4677777766532 233 6999984 3456544442 34555422 11 1223322211100
Q ss_pred cccCCCeEEEEcCCCCChhHHHHHHHHHHhcCC
Q 006472 197 QKHSKKYILVHCTHGHNRTGYMIVHFLMRSQSM 229 (643)
Q Consensus 197 ~~~~~~~VlVHC~~G~~RSG~li~aYLm~~~g~ 229 (643)
..++..|+|+|..|. ||. .++.+|. ..|+
T Consensus 71 -~~~~~~ivv~C~sG~-RS~-~aa~~L~-~~G~ 99 (134)
T 1vee_A 71 -DPENTTLYILDKFDG-NSE-LVAELVA-LNGF 99 (134)
T ss_dssp -CGGGCEEEEECSSST-THH-HHHHHHH-HHTC
T ss_pred -CCCCCEEEEEeCCCC-cHH-HHHHHHH-HcCC
Confidence 135689999999994 874 4455554 4565
No 113
>2owo_A DNA ligase; protein-DNA complex, ligase-DNA complex; HET: DNA OMC AMP; 2.30A {Escherichia coli}
Probab=82.04 E-value=19 Score=40.97 Aligned_cols=159 Identities=14% Similarity=0.148 Sum_probs=89.8
Q ss_pred ceeeeecCceeEEEEEEECCE-EEEEeCCCccc--ccc--C----CCCCcCCcccccccCCCCeEeeEEEEEecC-----
Q 006472 331 YYYATWKADGTRYMMLITIDG-CYLIDRCFNFR--RVQ--M----RFPCRNSNEGLGEKTHHFTLLDGEMIIDKL----- 396 (643)
Q Consensus 331 ~Y~V~eK~DG~R~ll~i~~~~-vyLidR~~~~~--~v~--~----~FP~~~~~~~~~~~~~~~tlLDGElV~d~~----- 396 (643)
.|++++|.||.-+-|...++. +..++|.+-.. .++ + ..|..-. + +.......+=||++..+.
T Consensus 109 ~~~~e~KiDGlaisL~Ye~G~Lv~a~TRGDG~~GEdvT~n~rtI~~IP~~l~--~--~~~p~~levRGEv~m~~~~F~~l 184 (671)
T 2owo_A 109 TWCCELKLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLH--G--ENIPARLEVRGEVFLPQAGFEKI 184 (671)
T ss_dssp CEEEEEEESSEEEEEEEETTEEEEEECCTTSSEEEBCHHHHHTCTTSCSBCC--S--SSCCSEEEEEEEEECCHHHHHHH
T ss_pred eEEEEEecceEEEEEEEeCCEEEEEEecCCCcchhhHHHHHhhhcCCCcccc--C--CCCCCeEEEEEEEEEEHHHHHHH
Confidence 699999999999987777665 57899964211 111 1 1121110 0 001223678999998431
Q ss_pred -------CCC---------------------CCcceEEEEeEeeecCC-eeccCCCHHHHHHHHHHHhcCcccccccccc
Q 006472 397 -------PDS---------------------RRQERRYLIYDMMAINQ-ASVIERPFYERWKMLEKEVIEPRNYERHNIY 447 (643)
Q Consensus 397 -------~~~---------------------~~~~~~yliFDiL~~~G-~~l~~~pf~eR~~~L~~~v~~p~~~~~~~~~ 447 (643)
++. ....+.|++|++...+| ... ....+++..|.++-+..
T Consensus 185 N~~~~~~g~~~faNpRNaaAGsLrqld~~~~a~R~L~~~~y~~~~~~~~~~~--~t~~e~l~~L~~~Gf~v--------- 253 (671)
T 2owo_A 185 NEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELP--DTHLGRLLQFKKWGLPV--------- 253 (671)
T ss_dssp HHHHHHSSCCCCSCHHHHHHHHHTCSCHHHHHTSCCEEEEEEEEEEESSCCC--SBHHHHHHHHHHHTCCC---------
T ss_pred HHHHHhcCCCcccChHHHHHHHHHhcChhhHhcCCCEEEEEECcccCCCCCC--CCHHHHHHHHHHCCCCC---------
Confidence 110 02568999999965554 322 46788999998865321
Q ss_pred ccCCCCccCCCCCcEEEecceeechhHHHHHHH---hcccccCCCceEEEEeCCCC------CccCCCCCeEEEecCCCc
Q 006472 448 QSRNPYYRYDLEPFRVRRKDFWLLSTVNKLLKE---FIPKLSHDADGLVFQGWDDP------YVPRTHEGLLKWKYARMN 518 (643)
Q Consensus 448 ~~~~p~~~~~~~pf~I~~K~~~~~~~~~~ll~~---~~~~l~h~~DGLIf~p~~sp------Y~~G~~~~llKWKP~~~n 518 (643)
+|.. -. +-.+..+...++. ....+++..||+|++=.+-+ |+......-+=||+|...
T Consensus 254 ---~~~~--------~~---~~~~~~v~~~~~~~~~~R~~l~y~iDGvViKv~~~~~q~~LG~t~k~PrWAiA~Kfpae~ 319 (671)
T 2owo_A 254 ---SDRV--------TL---CESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAFKFPAQE 319 (671)
T ss_dssp ---CTTC--------EE---ESSHHHHHHHHHHHHHHGGGSSSCEEEEEEEESBHHHHHHHCBCSSSBSSEEEEECCCCE
T ss_pred ---CCcc--------ee---eCCHHHHHHHHHHHHHHHhcCCCCCccEEEEecCHHHHHHhCcccCCCCceEEEcCCCce
Confidence 1110 01 1112233333332 34678999999999975543 333333455666666544
No 114
>1dgs_A DNA ligase; AMP complex, NAD+-dependent; HET: DNA AMP; 2.90A {Thermus filiformis} SCOP: a.60.2.2 b.40.4.6 d.142.2.2 PDB: 1v9p_A*
Probab=74.92 E-value=48 Score=37.68 Aligned_cols=160 Identities=14% Similarity=0.120 Sum_probs=85.1
Q ss_pred ceeeeecCceeEEEEEEECCEEEEEeCCCccc--cccCCCCCcCC-cccccccCCCCeEeeEEEEEecC-----------
Q 006472 331 YYYATWKADGTRYMMLITIDGCYLIDRCFNFR--RVQMRFPCRNS-NEGLGEKTHHFTLLDGEMIIDKL----------- 396 (643)
Q Consensus 331 ~Y~V~eK~DG~R~ll~i~~~~vyLidR~~~~~--~v~~~FP~~~~-~~~~~~~~~~~tlLDGElV~d~~----------- 396 (643)
.|++++|.||.-+ |...++. ..++|.+-.. .++.......+ +..+.. ......+=||++..+.
T Consensus 110 ~~~~e~KiDGlai-L~Ye~G~-~a~TRGDG~~GedvT~n~rtI~~iP~~l~~-~p~~levRGEv~m~~~~F~~lN~~~~~ 186 (667)
T 1dgs_A 110 LYTVEHKVDGLSV-LYYEEGV-WSTGSGDGEVGEEVTQNLLTIPTIPRRLKG-VPDRLEVRGEVYMPIEAFLRLNEELEE 186 (667)
T ss_dssp EEEEEECCSCEEE-EEEETTE-EEEEECSSSEEEBCTGGGTSSTTSCSBCSS-CCSEEEEEEEEECCHHHHHHHHHHHHH
T ss_pred eEEEEEccceeEE-EEEcCCC-EEEeeCCCcchhhHHHHHhhhcCCCcccCC-CCCeEEEEEEEEEEHHHHHHHHHHHHh
Confidence 4999999999999 7767666 8999964211 11111100000 011100 0122678999998431
Q ss_pred -CCC---------------------CCcce--EEEEeEeee-cCCeeccCCCHHHHHHHHHHHhcCccccccccccccCC
Q 006472 397 -PDS---------------------RRQER--RYLIYDMMA-INQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRN 451 (643)
Q Consensus 397 -~~~---------------------~~~~~--~yliFDiL~-~~G~~l~~~pf~eR~~~L~~~v~~p~~~~~~~~~~~~~ 451 (643)
++. ....+ .|++|+++. .++.. -....+++..|.++-+.. +
T Consensus 187 ~g~~~faNpRNaaAGsLrqld~~~~a~r~L~~~~~~y~~~~~~~~~~--~~t~~e~l~~L~~~Gf~v------------~ 252 (667)
T 1dgs_A 187 RGEKVFKNPRNAAAGSLRQKDPRVTAKRGLRATFYALGLGLGLEESG--LKSQYELLLWLKEKGFPV------------E 252 (667)
T ss_dssp HTCCCCSSHHHHHHHHHSCSSHHHHHHSCCEEECCCBCTTTTTTSCC--CCBHHHHHHHHHHTTCCC------------C
T ss_pred cCCCcccChHHHHHHHHHhcChhhhhhCCCCCEEEEEEeeccCCCCC--CCCHHHHHHHHHHCCCCC------------C
Confidence 110 02457 899998841 23322 246788888888754321 1
Q ss_pred CCccCCCCCcEEEecceeechhHHHHHHHh---cccccCCCceEEEEeCCCC------CccCCCCCeEEEecCCCc
Q 006472 452 PYYRYDLEPFRVRRKDFWLLSTVNKLLKEF---IPKLSHDADGLVFQGWDDP------YVPRTHEGLLKWKYARMN 518 (643)
Q Consensus 452 p~~~~~~~pf~I~~K~~~~~~~~~~ll~~~---~~~l~h~~DGLIf~p~~sp------Y~~G~~~~llKWKP~~~n 518 (643)
|. .+. +-.+..+...++.+ ...+++..||+|++=.+-. |+......-+=||+|...
T Consensus 253 ~~---------~~~--~~~~~~v~~~~~~~~~~R~~l~y~iDGvViKv~~~~~q~~LG~t~k~PrWAiA~Kfpae~ 317 (667)
T 1dgs_A 253 HC---------YEK--ALGAEGVEEVYRRGLAQRHALPFEADGVVLKLDDLTLWGELGYTARAPRFALAYKFPAEE 317 (667)
T ss_dssp SC---------EEE--EEHHHHHHHHHHHHHHTTTTSSSCCCEEEEEESBTHHHHHSCBCSSCBSSEEEEECCCCC
T ss_pred cc---------ceE--eCCHHHHHHHHHHHHHHHhcCCCCCCcEEEEecCHHHHHHhCcccCCCCceEEecCCCce
Confidence 11 110 11122333333333 3578999999999975544 333333444566665443
No 115
>3sgi_A DNA ligase; HET: DNA AMP; 3.50A {Mycobacterium tuberculosis}
Probab=70.85 E-value=7.6 Score=43.69 Aligned_cols=161 Identities=14% Similarity=0.087 Sum_probs=88.2
Q ss_pred ceeeeecCceeEEEEEEECCE-EEEEeCCCccc--ccc--C----CCCCcCCcccccccCCCCeEeeEEEEEecC-----
Q 006472 331 YYYATWKADGTRYMMLITIDG-CYLIDRCFNFR--RVQ--M----RFPCRNSNEGLGEKTHHFTLLDGEMIIDKL----- 396 (643)
Q Consensus 331 ~Y~V~eK~DG~R~ll~i~~~~-vyLidR~~~~~--~v~--~----~FP~~~~~~~~~~~~~~~tlLDGElV~d~~----- 396 (643)
.|++++|.||.=+-|...++. +..++|.+-.. .++ + ..|..-...+. ........+=||++..+.
T Consensus 117 ~~~~EpKiDGlavsL~Ye~G~Lv~a~TRGDG~~GEDVT~nvrtI~~IP~~L~~~~~-~~~p~~levRGEv~m~~~~F~~l 195 (615)
T 3sgi_A 117 HYLCELKIDGVALSLVYREGRLTRASTRGDGRTGEDVTLNARTIADVPERLTPGDD-YPVPEVLEVRGEVFFRLDDFQAL 195 (615)
T ss_dssp CEEEEEEECSEEEEEEEETTEEEEEECCTTSSSCBCCHHHHHSCSSSCSSCCCCSS-CCCCSEEEEEEEEECCHHHHHHH
T ss_pred eEEEEEEecceEEEEEEECCEEEEEEecCCCcchhhHHHHHHhhcCcchhhcCCcc-cCCCCeEEEEEEEEEeHHHHHHH
Confidence 799999999999988777665 58899963211 111 1 11211100000 001234678999998431
Q ss_pred -------CC------------------CC---CcceEEEEeEeeecCCeeccCCCHHHHHHHHHHHhcCccccccccccc
Q 006472 397 -------PD------------------SR---RQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQ 448 (643)
Q Consensus 397 -------~~------------------~~---~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~v~~p~~~~~~~~~~ 448 (643)
+. .. +..+.|++|.+...+|... ....+++..|.++-+.-
T Consensus 196 N~~~~~~g~~~faNpRNaAAGsLRqld~~ita~R~L~~f~y~~~~~~~~~~--~t~~e~l~~L~~~Gf~v---------- 263 (615)
T 3sgi_A 196 NASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGHVEGFRP--ATLHQAYLALRAWGLPV---------- 263 (615)
T ss_dssp HTTCSSSSSCCCSSHHHHHHHHHTCSSTTHHHHSCCEEEEEEEEEEESCCC--SBTTTHHHHHHHTTCCC----------
T ss_pred HHHHHHcCCCcCCChHHHHHHHHHcCChhhHhhCcceEEEEeccccCCCCC--cCHHHHHHHHHHCCCCC----------
Confidence 00 00 1468999999987765432 24567888888753211
Q ss_pred cCCCCccCCCCCcEEEecceeechhHHHHHHHh---cccccCCCceEEEEeCCCCC------ccCCCCCeEEEecCCC
Q 006472 449 SRNPYYRYDLEPFRVRRKDFWLLSTVNKLLKEF---IPKLSHDADGLVFQGWDDPY------VPRTHEGLLKWKYARM 517 (643)
Q Consensus 449 ~~~p~~~~~~~pf~I~~K~~~~~~~~~~ll~~~---~~~l~h~~DGLIf~p~~spY------~~G~~~~llKWKP~~~ 517 (643)
+|+. +-+-.+..+...++.| ...+++..||+|++=.+-++ +......-+=||+|..
T Consensus 264 --~~~~-----------~~~~~~~ev~~~~~~~~~~R~~l~y~iDGvViKvn~~~~q~~lG~t~k~PRWAiA~Kfpae 328 (615)
T 3sgi_A 264 --SEHT-----------TLATDLAGVRERIDYWGEHRHEVDHEIDGVVVKVDEVALQRRLGSTSRAPRWAIAYKYPPE 328 (615)
T ss_dssp --CCCC-----------CCBSSHHHHHHHHTTTTTSGGGSSSCEEEEEEEESBHHHHHHHCBCSSSBSSEEEEECCCS
T ss_pred --CCCe-----------EeeCCHHHHHHHHHHHHHHhhcCCCCCCeEEEEecCHHHHHHhCCCCCCCCceEEEcCCCc
Confidence 1110 0011222333333332 34789999999999755433 3232345566776654
No 116
>2c5u_A RNA ligase, T4 RNA ligase 1; nucleotidyl transferase, ATP-binding; HET: APC; 2.21A {Bacteriophage T4}
Probab=62.62 E-value=14 Score=39.14 Aligned_cols=101 Identities=10% Similarity=-0.044 Sum_probs=60.4
Q ss_pred ccceeeeecCceeEEEEEEECCEEEEEeCCCccccccCCCCCc-CC--ccc---cc-ccCCCCeEeeEEEEEecCCCCCC
Q 006472 329 QRYYYATWKADGTRYMMLITIDGCYLIDRCFNFRRVQMRFPCR-NS--NEG---LG-EKTHHFTLLDGEMIIDKLPDSRR 401 (643)
Q Consensus 329 ~~~Y~V~eK~DG~R~ll~i~~~~vyLidR~~~~~~v~~~FP~~-~~--~~~---~~-~~~~~~tlLDGElV~d~~~~~~~ 401 (643)
..+|.|++|.||.=+..+..++.+++.+|.+-...-..++... .. ... +. +....+..+=||++....+..-.
T Consensus 92 ~~pv~V~eK~DGslv~~~~~~G~l~~~SKgs~~~~~a~~~~~~l~~~~~~~l~~~~~~l~~~~~t~~fE~~~pen~hVl~ 171 (375)
T 2c5u_A 92 NDVDYILTKEDGSLVSTYLDGDEILFKSKGSIKSEQALMANGILMNINHHRLRDRLKELAEDGFTANFEFVAPTNRIVLA 171 (375)
T ss_dssp GGEEEEEEECCSEEEEEEEETTEEEEEETTBSSSHHHHHHHHHHHSGGGHHHHHHHHHHHHTTEEEEEEEECTTSCSSSC
T ss_pred CCCEEEEEecCCeEEEEEEECCEEEEEeCCCCCChHHHHHHHHHhhhcchHHHHHHHHhcCCCCEEEEEEcCCCCceecc
Confidence 4689999999999877777888999999986421000000000 00 000 00 01135667779999754321100
Q ss_pred -cceEEEEeEeeecC-CeeccCCCHHHHHHHHH
Q 006472 402 -QERRYLIYDMMAIN-QASVIERPFYERWKMLE 432 (643)
Q Consensus 402 -~~~~yliFDiL~~~-G~~l~~~pf~eR~~~L~ 432 (643)
....+++||+.... |+- +|+.++.+..+
T Consensus 172 Y~~~~L~L~~i~~n~tg~~---l~~~e~~~~a~ 201 (375)
T 2c5u_A 172 YQEMKIILLNVRENETGEY---ISYDDIYKDAT 201 (375)
T ss_dssp CSSCEEEEEEEEETTTCCB---CCHHHHHHCTT
T ss_pred CCCCCEEEEEEEEcCCCcE---ecHHHHHHHHh
Confidence 23679999999865 444 78888865543
No 117
>2yf0_A Myotubularin-related protein 6; hydrolase; 2.65A {Homo sapiens}
Probab=55.85 E-value=13 Score=40.92 Aligned_cols=26 Identities=27% Similarity=0.432 Sum_probs=21.4
Q ss_pred cCCCeEEEEcCCCCChhHHHHHHHHH
Q 006472 199 HSKKYILVHCTHGHNRTGYMIVHFLM 224 (643)
Q Consensus 199 ~~~~~VlVHC~~G~~RSG~li~aYLm 224 (643)
..|..|+|||..|-.||+-+++.-.+
T Consensus 327 ~~g~sVLVhcsDGwDrT~ql~SLaql 352 (512)
T 2yf0_A 327 VENASVLVHCSDGWDRTSQVCSLGSL 352 (512)
T ss_dssp TTCCCEEECTTTSSSHHHHHHHHHHH
T ss_pred hCCCeEEEECCCCccccHHHHHHHHH
Confidence 47889999999999999877665544
No 118
>1zsq_A Myotubularin-related protein 2; protein-phospholipid complex, hydrolase; HET: PIB; 1.82A {Homo sapiens} SCOP: b.55.1.8 c.45.1.3 PDB: 1zvr_A*
Probab=52.51 E-value=18 Score=39.95 Aligned_cols=25 Identities=24% Similarity=0.464 Sum_probs=20.1
Q ss_pred CCCeEEEEcCCCCChhHHHHHHHHH
Q 006472 200 SKKYILVHCTHGHNRTGYMIVHFLM 224 (643)
Q Consensus 200 ~~~~VlVHC~~G~~RSG~li~aYLm 224 (643)
.+..|+|||..|-.||.-+++.-.+
T Consensus 340 ~~~sVLvhcsdGwDrT~ql~SLaql 364 (528)
T 1zsq_A 340 GKTSVVVHSSDGWDRTAQLTSLAML 364 (528)
T ss_dssp TCCCEEEECSSSSSHHHHHHHHHHH
T ss_pred CCceEEEECCCCccchHHHHHHHHH
Confidence 3469999999999999987665543
No 119
>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A
Probab=51.13 E-value=14 Score=31.25 Aligned_cols=29 Identities=17% Similarity=0.518 Sum_probs=20.0
Q ss_pred cCCCeEEEEcCCCCChhHHHHHHHHHHhcCCC
Q 006472 199 HSKKYILVHCTHGHNRTGYMIVHFLMRSQSMS 230 (643)
Q Consensus 199 ~~~~~VlVHC~~G~~RSG~li~aYLm~~~g~s 230 (643)
.++..|+|+|..| +||. .+|.+| ...|++
T Consensus 54 ~~~~~ivv~C~~G-~rS~-~aa~~L-~~~G~~ 82 (103)
T 3iwh_A 54 NKNEIYYIVCAGG-VRSA-KVVEYL-EANGID 82 (103)
T ss_dssp CTTSEEEEECSSS-SHHH-HHHHHH-HTTTCE
T ss_pred cCCCeEEEECCCC-HHHH-HHHHHH-HHcCCC
Confidence 4678999999998 5775 344455 446763
No 120
>1lw3_A Myotubularin-related protein 2; protein-phosphate complex, hydrolase; 2.30A {Homo sapiens} SCOP: b.55.1.8 c.45.1.3 PDB: 1m7r_A
Probab=46.95 E-value=24 Score=39.86 Aligned_cols=25 Identities=24% Similarity=0.464 Sum_probs=20.1
Q ss_pred CCCeEEEEcCCCCChhHHHHHHHHH
Q 006472 200 SKKYILVHCTHGHNRTGYMIVHFLM 224 (643)
Q Consensus 200 ~~~~VlVHC~~G~~RSG~li~aYLm 224 (643)
.+..|+|||..|-.||.-+++.-.+
T Consensus 412 ~~~sVLVhcsDGwDrT~qlsSLaQL 436 (657)
T 1lw3_A 412 GKTSVVVHSSDGWDRTAQLTSLAML 436 (657)
T ss_dssp TCCCEEEECSSSSSHHHHHHHHHHH
T ss_pred CCceEEEECCCCccchHHHHHHHHH
Confidence 3469999999999999987765533
No 121
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=45.16 E-value=44 Score=33.99 Aligned_cols=90 Identities=7% Similarity=0.097 Sum_probs=47.7
Q ss_pred CHHHHHHHHHHcCCCeeEEEEcCCCCCCCCcchhccCCcEEEEeecc------CCCCCCCHHHHHHHHHHHHHHHHhccc
Q 006472 126 SFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCK------GRDAVPDNASVNNFVYEVTQFLSRQKH 199 (643)
Q Consensus 126 ~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~------d~~~~P~~~~i~~f~~~v~~fi~~~~~ 199 (643)
++++|.+.+. ..+ ..|||++.....|....+. | -+.+|+. ..+..|+.+.+...+..+ ...
T Consensus 43 s~~~l~~~l~--~~~-~~iiDvR~~~e~y~~gHIp--G--Ai~ip~~~~~~~~~~~~~~~~~~~~~~l~~l------gi~ 109 (318)
T 3hzu_A 43 TADWLSAHMG--APG-LAIVESDEDVLLYDVGHIP--G--AVKIDWHTDLNDPRVRDYINGEQFAELMDRK------GIA 109 (318)
T ss_dssp CHHHHHHHTT--CTT-EEEEECCSSTTSGGGCBCT--T--EEECCHHHHHBCSSSSSBCCHHHHHHHHHHT------TCC
T ss_pred cHHHHHHhcc--CCC-EEEEECCCChhHHhcCcCC--C--CeEeCchhhhccCcccCCCCHHHHHHHHHHc------CCC
Confidence 5667766543 123 4699998544324322222 2 2334431 112355555555443221 134
Q ss_pred CCCeEEEEcCCCCChhHHHHHHHHHHhcCCC
Q 006472 200 SKKYILVHCTHGHNRTGYMIVHFLMRSQSMS 230 (643)
Q Consensus 200 ~~~~VlVHC~~G~~RSG~li~aYLm~~~g~s 230 (643)
++..|+|+|..|..|++. ++++++..|++
T Consensus 110 ~~~~vVvyc~~g~~~a~~--a~~~L~~~G~~ 138 (318)
T 3hzu_A 110 RDDTVVIYGDKSNWWAAY--ALWVFTLFGHA 138 (318)
T ss_dssp TTCEEEEECSGGGHHHHH--HHHHHHHTTCS
T ss_pred CCCeEEEECCCCCccHHH--HHHHHHHcCCC
Confidence 678999999998656543 44666667774
No 122
>2hhg_A Hypothetical protein RPA3614; MCSG, structural genomics, rohopseudom palustris, PSI-2, protein structure initiative; 1.20A {Rhodopseudomonas palustris}
Probab=44.20 E-value=15 Score=32.19 Aligned_cols=28 Identities=14% Similarity=0.274 Sum_probs=19.1
Q ss_pred cCCCeEEEEcCCCCChhHHHHHHHHHHhcCC
Q 006472 199 HSKKYILVHCTHGHNRTGYMIVHFLMRSQSM 229 (643)
Q Consensus 199 ~~~~~VlVHC~~G~~RSG~li~aYLm~~~g~ 229 (643)
.++..|+|+|..| .||.. ++ +++...|+
T Consensus 84 ~~~~~ivvyC~~G-~rs~~-a~-~~L~~~G~ 111 (139)
T 2hhg_A 84 QEDKKFVFYCAGG-LRSAL-AA-KTAQDMGL 111 (139)
T ss_dssp GSSSEEEEECSSS-HHHHH-HH-HHHHHHTC
T ss_pred CCCCeEEEECCCC-hHHHH-HH-HHHHHcCC
Confidence 4678999999998 47753 34 44445566
No 123
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=43.44 E-value=17 Score=29.98 Aligned_cols=28 Identities=18% Similarity=0.543 Sum_probs=18.5
Q ss_pred cCCCeEEEEcCCCCChhHHHHHHHHHHhcCC
Q 006472 199 HSKKYILVHCTHGHNRTGYMIVHFLMRSQSM 229 (643)
Q Consensus 199 ~~~~~VlVHC~~G~~RSG~li~aYLm~~~g~ 229 (643)
.++..|+|+|..| .||. .++.+| ...|+
T Consensus 54 ~~~~~ivvyC~~g-~rs~-~a~~~L-~~~G~ 81 (100)
T 3foj_A 54 NDNETYYIICKAG-GRSA-QVVQYL-EQNGV 81 (100)
T ss_dssp CTTSEEEEECSSS-HHHH-HHHHHH-HTTTC
T ss_pred CCCCcEEEEcCCC-chHH-HHHHHH-HHCCC
Confidence 4568999999888 5654 444444 45565
No 124
>2fsx_A RV0390, COG0607: rhodanese-related sulfurtransferase; RV0390 BR SAD DATA with FBAR, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis}
Probab=40.77 E-value=21 Score=31.86 Aligned_cols=28 Identities=14% Similarity=0.322 Sum_probs=17.2
Q ss_pred cCCCeEEEEcCCCCChhHHHHHHHHHHhcCC
Q 006472 199 HSKKYILVHCTHGHNRTGYMIVHFLMRSQSM 229 (643)
Q Consensus 199 ~~~~~VlVHC~~G~~RSG~li~aYLm~~~g~ 229 (643)
.++..|+|+|..| +||. .++.+| ...|+
T Consensus 78 ~~~~~ivvyC~~G-~rS~-~aa~~L-~~~G~ 105 (148)
T 2fsx_A 78 QHERPVIFLCRSG-NRSI-GAAEVA-TEAGI 105 (148)
T ss_dssp ---CCEEEECSSS-STHH-HHHHHH-HHTTC
T ss_pred CCCCEEEEEcCCC-hhHH-HHHHHH-HHcCC
Confidence 3567899999998 4775 444444 44565
No 125
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}
Probab=39.56 E-value=20 Score=30.19 Aligned_cols=28 Identities=29% Similarity=0.485 Sum_probs=18.4
Q ss_pred cCCCeEEEEcCCCCChhHHHHHHHHHHhcCC
Q 006472 199 HSKKYILVHCTHGHNRTGYMIVHFLMRSQSM 229 (643)
Q Consensus 199 ~~~~~VlVHC~~G~~RSG~li~aYLm~~~g~ 229 (643)
.++..|+|+|..| .||. .++ .++...|+
T Consensus 53 ~~~~~ivvyC~~G-~rs~-~aa-~~L~~~G~ 80 (108)
T 3gk5_A 53 ERDKKYAVICAHG-NRSA-AAV-EFLSQLGL 80 (108)
T ss_dssp CTTSCEEEECSSS-HHHH-HHH-HHHHTTTC
T ss_pred CCCCeEEEEcCCC-cHHH-HHH-HHHHHcCC
Confidence 4568999999888 5654 344 44445565
No 126
>1qxn_A SUD, sulfide dehydrogenase; polysulfide-sulfur transferase, homodimer; NMR {Wolinella succinogenes} SCOP: c.46.1.3
Probab=38.90 E-value=22 Score=31.42 Aligned_cols=28 Identities=21% Similarity=0.366 Sum_probs=19.5
Q ss_pred cCCCeEEEEcCCCCChhHHHHHHHHHHhcCC
Q 006472 199 HSKKYILVHCTHGHNRTGYMIVHFLMRSQSM 229 (643)
Q Consensus 199 ~~~~~VlVHC~~G~~RSG~li~aYLm~~~g~ 229 (643)
.++..|+|+|..|. ||.. ++.+| ...|+
T Consensus 80 ~~~~~ivvyC~~G~-rS~~-aa~~L-~~~G~ 107 (137)
T 1qxn_A 80 DPEKPVVVFCKTAA-RAAL-AGKTL-REYGF 107 (137)
T ss_dssp CTTSCEEEECCSSS-CHHH-HHHHH-HHHTC
T ss_pred CCCCeEEEEcCCCc-HHHH-HHHHH-HHcCC
Confidence 46789999999995 7753 44445 44565
No 127
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=38.60 E-value=28 Score=28.75 Aligned_cols=28 Identities=14% Similarity=0.405 Sum_probs=18.6
Q ss_pred cCCCeEEEEcCCCCChhHHHHHHHHHHhcCC
Q 006472 199 HSKKYILVHCTHGHNRTGYMIVHFLMRSQSM 229 (643)
Q Consensus 199 ~~~~~VlVHC~~G~~RSG~li~aYLm~~~g~ 229 (643)
.++..|+|+|..| .||. .++ .++...|+
T Consensus 54 ~~~~~iv~yC~~g-~rs~-~a~-~~L~~~G~ 81 (103)
T 3eme_A 54 NKNEIYYIVCAGG-VRSA-KVV-EYLEANGI 81 (103)
T ss_dssp CTTSEEEEECSSS-SHHH-HHH-HHHHTTTC
T ss_pred CCCCeEEEECCCC-hHHH-HHH-HHHHHCCC
Confidence 4678999999998 5764 333 44445565
No 128
>4f67_A UPF0176 protein LPG2838; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium; 1.79A {Legionella pneumophila subsp}
Probab=37.25 E-value=37 Score=33.96 Aligned_cols=85 Identities=14% Similarity=0.125 Sum_probs=44.9
Q ss_pred CCCCHHHHHHHHHHcCCCeeEEEEcCCCCCCCCcchhccCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCC
Q 006472 123 KRYSFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKK 202 (643)
Q Consensus 123 ~~~~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~ 202 (643)
..-++.++.+.+. .+=..|||+.+. .++.. -+|| |--.+|. ..+..+...+...+. ..++.
T Consensus 122 ~~Is~~el~~ll~---~~~~vlIDVR~~------~Ey~~-----GHIp--GAiniP~-~~~~~~~~~l~~~l~--~~kdk 182 (265)
T 4f67_A 122 TYLSPEEWHQFIQ---DPNVILLDTRND------YEYEL-----GTFK--NAINPDI-ENFREFPDYVQRNLI--DKKDK 182 (265)
T ss_dssp CEECHHHHHHHTT---CTTSEEEECSCH------HHHHH-----EEET--TCBCCCC-SSGGGHHHHHHHHTG--GGTTS
T ss_pred ceECHHHHHHHhc---CCCeEEEEeCCc------hHhhc-----CcCC--CCEeCCH-HHHHhhHHHHHHhhh--hCCCC
Confidence 3456788776653 223468999843 33432 1222 2212332 223333333333333 24678
Q ss_pred eEEEEcCCCCChhHHHHHHHHHHhcCC
Q 006472 203 YILVHCTHGHNRTGYMIVHFLMRSQSM 229 (643)
Q Consensus 203 ~VlVHC~~G~~RSG~li~aYLm~~~g~ 229 (643)
.|+|+|+.|. ||. .++.+|.. .|+
T Consensus 183 ~IVvyC~~G~-RS~-~Aa~~L~~-~Gf 206 (265)
T 4f67_A 183 KIAMFCTGGI-RCE-KTTAYMKE-LGF 206 (265)
T ss_dssp CEEEECSSSH-HHH-HHHHHHHH-HTC
T ss_pred eEEEEeCCCh-HHH-HHHHHHHH-cCC
Confidence 9999999874 654 55556654 465
No 129
>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A
Probab=37.18 E-value=27 Score=30.16 Aligned_cols=81 Identities=23% Similarity=0.259 Sum_probs=42.3
Q ss_pred CCHHHHHHHHHHcCCCeeEEEEcCCCCCCCCcchhccCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeE
Q 006472 125 YSFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYI 204 (643)
Q Consensus 125 ~~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~V 204 (643)
-++.++.+.+.....+ ..|||+.....+| .. | +| +|--.+|- ..+.. .+.. ..++..|
T Consensus 17 is~~el~~~l~~~~~~-~~liDvR~~~e~~-----~~-g----hI--pgA~nip~-~~l~~-------~~~~-l~~~~~i 74 (124)
T 3flh_A 17 IDHHTVLADMQNATGK-YVVLDVRNAPAQV-----KK-D----QI--KGAIAMPA-KDLAT-------RIGE-LDPAKTY 74 (124)
T ss_dssp ECHHHHHHHHHHTCCC-EEEEECCCSCHHH-----HC-C----EE--TTCEECCH-HHHHH-------HGGG-SCTTSEE
T ss_pred ecHHHHHHHHHcCCCC-EEEEECCCHHHHH-----hc-C----cC--CCCEECCH-HHHHH-------HHhc-CCCCCeE
Confidence 3577787766543222 4699998543221 21 1 12 22212443 22222 2221 3457899
Q ss_pred EEEcCCCCChh-HHHHHHHHHHhcCC
Q 006472 205 LVHCTHGHNRT-GYMIVHFLMRSQSM 229 (643)
Q Consensus 205 lVHC~~G~~RS-G~li~aYLm~~~g~ 229 (643)
+|+|..|. |+ +..++..| ...|+
T Consensus 75 vvyC~~g~-r~~s~~a~~~L-~~~G~ 98 (124)
T 3flh_A 75 VVYDWTGG-TTLGKTALLVL-LSAGF 98 (124)
T ss_dssp EEECSSSS-CSHHHHHHHHH-HHHTC
T ss_pred EEEeCCCC-chHHHHHHHHH-HHcCC
Confidence 99999995 65 44455545 44576
No 130
>3f4a_A Uncharacterized protein YGR203W; protein phosphatase, rhodanese-like family, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.80A {Saccharomyces cerevisiae} PDB: 3fs5_A*
Probab=36.48 E-value=1.6e+02 Score=26.79 Aligned_cols=23 Identities=17% Similarity=0.384 Sum_probs=16.7
Q ss_pred CCeEEEEcCCCCChhHHHHHHHHH
Q 006472 201 KKYILVHCTHGHNRTGYMIVHFLM 224 (643)
Q Consensus 201 ~~~VlVHC~~G~~RSG~li~aYLm 224 (643)
...|+|||..|-.|+... |.+|.
T Consensus 104 ~~~IVvyC~sG~~Rs~~a-a~~l~ 126 (169)
T 3f4a_A 104 ALNVIFHCMLSQQRGPSA-AMLLL 126 (169)
T ss_dssp CEEEEEECSSSSSHHHHH-HHHHH
T ss_pred CCeEEEEeCCCCCcHHHH-HHHHH
Confidence 368999999998888643 33444
No 131
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=33.57 E-value=82 Score=24.73 Aligned_cols=29 Identities=17% Similarity=0.377 Sum_probs=19.2
Q ss_pred cCCCeEEEEcCCCCChhHHHHHHHHHHhcCCC
Q 006472 199 HSKKYILVHCTHGHNRTGYMIVHFLMRSQSMS 230 (643)
Q Consensus 199 ~~~~~VlVHC~~G~~RSG~li~aYLm~~~g~s 230 (643)
.++.+|+|+|..|. ||. .++.+| ...|++
T Consensus 39 ~~~~~ivv~C~~g~-rs~-~aa~~L-~~~G~~ 67 (85)
T 2jtq_A 39 DKNDTVKVYCNAGR-QSG-QAKEIL-SEMGYT 67 (85)
T ss_dssp CTTSEEEEEESSSH-HHH-HHHHHH-HHTTCS
T ss_pred CCCCcEEEEcCCCc-hHH-HHHHHH-HHcCCC
Confidence 46789999999883 654 444444 446763
No 132
>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A
Probab=30.45 E-value=45 Score=29.58 Aligned_cols=80 Identities=21% Similarity=0.262 Sum_probs=41.4
Q ss_pred CHHHHHHHHHHcCCCeeEEEEcCCCCCCCCcchhccCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEE
Q 006472 126 SFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYIL 205 (643)
Q Consensus 126 ~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~Vl 205 (643)
++.+|.+.+.. +..=..|||+.. +.++.. | +|| |.-.+|-.+ +.. .+.....++..|+
T Consensus 3 s~~el~~~l~~-~~~~~~liDvR~------~~e~~~-g----hIp--gAi~ip~~~-l~~-------~~~~~l~~~~~iv 60 (141)
T 3ilm_A 3 DAHVLKSRLEW-GEPAFTILDVRD------RSTYND-G----HIM--GAMAMPIED-LVD-------RASSSLEKSRDIY 60 (141)
T ss_dssp CHHHHHHHHHH-SCSCEEEEECSC------HHHHHH-C----EET--TCEECCGGG-HHH-------HHHTTSCTTSEEE
T ss_pred CHHHHHHHHhc-CCCCEEEEECCC------HHHHhC-C----CCC--CCEEcCHHH-HHH-------HHHhcCCCCCeEE
Confidence 46677766653 222246999984 334443 1 222 211244322 222 1212234668899
Q ss_pred EEcCCCCChhHHHHHHHHHHhcCCC
Q 006472 206 VHCTHGHNRTGYMIVHFLMRSQSMS 230 (643)
Q Consensus 206 VHC~~G~~RSG~li~aYLm~~~g~s 230 (643)
|+|..| .||. .++. ++...|++
T Consensus 61 vyC~~g-~rs~-~aa~-~L~~~G~~ 82 (141)
T 3ilm_A 61 VYGAGD-EQTS-QAVN-LLRSAGFE 82 (141)
T ss_dssp EECSSH-HHHH-HHHH-HHHHTTCC
T ss_pred EEECCC-hHHH-HHHH-HHHHcCCC
Confidence 999988 5665 3444 44456763
No 133
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=30.04 E-value=42 Score=32.93 Aligned_cols=30 Identities=20% Similarity=0.406 Sum_probs=20.1
Q ss_pred ccCCCeEEEEcCCCCChhHHHHHHHHHHhcCCC
Q 006472 198 KHSKKYILVHCTHGHNRTGYMIVHFLMRSQSMS 230 (643)
Q Consensus 198 ~~~~~~VlVHC~~G~~RSG~li~aYLm~~~g~s 230 (643)
..++..|+|||..| .||. .++.+| ...|++
T Consensus 220 ~~~~~~ivvyC~~G-~rs~-~a~~~L-~~~G~~ 249 (271)
T 1e0c_A 220 ITPDKEIVTHCQTH-HRSG-LTYLIA-KALGYP 249 (271)
T ss_dssp CCTTSEEEEECSSS-SHHH-HHHHHH-HHTTCS
T ss_pred CCCCCCEEEECCch-HHHH-HHHHHH-HHcCCC
Confidence 34678999999999 4765 444444 456763
No 134
>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A
Probab=29.06 E-value=87 Score=25.86 Aligned_cols=76 Identities=13% Similarity=0.319 Sum_probs=40.7
Q ss_pred CHHHHHHHHHHcCCCeeEEEEcCCCCCCCCcchhccCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEE
Q 006472 126 SFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYIL 205 (643)
Q Consensus 126 ~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~Vl 205 (643)
++.++.+.++. + + ..|||+.. +.++.. | +|| |.-.+|. ..+..+ +.. ..++.+|+
T Consensus 8 ~~~~l~~~~~~-~-~-~~liDvR~------~~e~~~-g----hIp--gA~~ip~-~~l~~~-------~~~-l~~~~~iv 62 (108)
T 1gmx_A 8 NVADAHQKLQE-K-E-AVLVDIRD------PQSFAM-G----HAV--QAFHLTN-DTLGAF-------MRD-NDFDTPVM 62 (108)
T ss_dssp CHHHHHHHHHT-T-C-CEEEECSC------HHHHHH-C----EET--TCEECCH-HHHHHH-------HHH-SCTTSCEE
T ss_pred CHHHHHHHHhC-C-C-CEEEEcCC------HHHHHh-C----CCc--cCEeCCH-HHHHHH-------HHh-cCCCCCEE
Confidence 56777666542 2 3 46999984 334443 1 222 2212442 233332 222 24678999
Q ss_pred EEcCCCCChhHHHHHHHHHHhcCC
Q 006472 206 VHCTHGHNRTGYMIVHFLMRSQSM 229 (643)
Q Consensus 206 VHC~~G~~RSG~li~aYLm~~~g~ 229 (643)
|+|..|. ||. .++..| ...|+
T Consensus 63 vyc~~g~-rs~-~a~~~L-~~~G~ 83 (108)
T 1gmx_A 63 VMCYHGN-SSK-GAAQYL-LQQGY 83 (108)
T ss_dssp EECSSSS-HHH-HHHHHH-HHHTC
T ss_pred EEcCCCc-hHH-HHHHHH-HHcCC
Confidence 9999985 664 344444 44566
No 135
>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1
Probab=27.50 E-value=67 Score=33.31 Aligned_cols=82 Identities=16% Similarity=0.251 Sum_probs=51.6
Q ss_pred CHHHHHHHHHHcCCCeeEEEEcCCCC-C--------CC--CcchhccCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHH
Q 006472 126 SFKQVIHQLRVLGRKLGLVIDLTNTT-R--------YY--PTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFL 194 (643)
Q Consensus 126 ~~~~l~~~~~~~~~~I~~VIdLt~~~-~--------~y--~~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi 194 (643)
+++.|+++++++|.++++.++-.... . ++ +.+.+.+.||.|+|+-....... .....+ ..+.+.|
T Consensus 75 Gl~~l~~~ih~~Glk~Giw~~~~~~~~~~~~pg~~~~~~~~~~~~~~wGvdyvK~D~~~~~~~---~~~~~y-~~~~~al 150 (362)
T 1uas_A 75 GIKALADYVHAKGLKLGIYSDAGSQTCSNKMPGSLDHEEQDVKTFASWGVDYLKYDNCNDAGR---SVMERY-TRMSNAM 150 (362)
T ss_dssp CHHHHHHHHHHTTCEEEEEEESSSBCTTSSSBCCTTCHHHHHHHHHHHTCCEEEEECCCCTTC---CHHHHH-HHHHHHH
T ss_pred cHHHHHHHHHHCCCEeEEEeeCCCccccCCCCCchhHHHHHHHHHHHcCCCEEEECccCCCCC---CHHHHH-HHHHHHH
Confidence 68999999999999999888764211 1 11 23457789999999987654222 223333 2344445
Q ss_pred HhcccCCCeEEEE-cCCCCCh
Q 006472 195 SRQKHSKKYILVH-CTHGHNR 214 (643)
Q Consensus 195 ~~~~~~~~~VlVH-C~~G~~R 214 (643)
.+ .+..|+++ |..|-..
T Consensus 151 ~~---~~~~i~~~~c~~g~~~ 168 (362)
T 1uas_A 151 KT---YGKNIFFSLCEWGKEN 168 (362)
T ss_dssp HH---HCTTSEEEEESTTTTC
T ss_pred Hh---hCCCcEEEecCCCCCC
Confidence 42 34556666 9877543
No 136
>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A
Probab=27.44 E-value=55 Score=27.21 Aligned_cols=29 Identities=24% Similarity=0.260 Sum_probs=18.7
Q ss_pred cCCCeEEEEcCCCCChhHHHHHHHHHHhcCCC
Q 006472 199 HSKKYILVHCTHGHNRTGYMIVHFLMRSQSMS 230 (643)
Q Consensus 199 ~~~~~VlVHC~~G~~RSG~li~aYLm~~~g~s 230 (643)
.++..|+|+|..| +||. .++ .++...|++
T Consensus 50 ~~~~~ivvyc~~g-~rs~-~a~-~~L~~~G~~ 78 (106)
T 3hix_A 50 EKSRDIYVYGAGD-EQTS-QAV-NLLRSAGFE 78 (106)
T ss_dssp CTTSCEEEECSSH-HHHH-HHH-HHHHHTTCS
T ss_pred CCCCeEEEEECCC-ChHH-HHH-HHHHHcCCc
Confidence 4567899999988 4643 344 444556763
No 137
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=26.86 E-value=88 Score=30.49 Aligned_cols=46 Identities=13% Similarity=0.207 Sum_probs=27.4
Q ss_pred CCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHHHhcCCC
Q 006472 177 VPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRSQSMS 230 (643)
Q Consensus 177 ~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~li~aYLm~~~g~s 230 (643)
.|+.+.+.+.+..+ . ..++..|+|+|..|..||.. +++++...|++
T Consensus 63 ~~~~~~~~~~~~~~----g--i~~~~~vvvyc~~g~~~s~~--a~~~L~~~G~~ 108 (271)
T 1e0c_A 63 QPPREQLESLFGEL----G--HRPEAVYVVYDDEGGGWAGR--FIWLLDVIGQQ 108 (271)
T ss_dssp CCCHHHHHHHHHHH----T--CCTTCEEEEECSSSSHHHHH--HHHHHHHTTCC
T ss_pred CCCHHHHHHHHHHc----C--CCCCCeEEEEcCCCCccHHH--HHHHHHHcCCC
Confidence 45655555543221 1 24578999999998657753 34445556763
No 138
>2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, PR structure initiative; NMR {Helicobacter pylori}
Probab=26.26 E-value=65 Score=26.92 Aligned_cols=28 Identities=25% Similarity=0.444 Sum_probs=18.5
Q ss_pred cCCCeEEEEcCCCCChhHHHHHHHHHHhcCC
Q 006472 199 HSKKYILVHCTHGHNRTGYMIVHFLMRSQSM 229 (643)
Q Consensus 199 ~~~~~VlVHC~~G~~RSG~li~aYLm~~~g~ 229 (643)
.++..|+|+|..| .||. .++.+| ...|+
T Consensus 54 ~~~~~ivvyC~~G-~rs~-~aa~~L-~~~G~ 81 (110)
T 2k0z_A 54 HKDKKVLLHCRAG-RRAL-DAAKSM-HELGY 81 (110)
T ss_dssp CSSSCEEEECSSS-HHHH-HHHHHH-HHTTC
T ss_pred CCCCEEEEEeCCC-chHH-HHHHHH-HHCCC
Confidence 4678999999988 4664 344444 44564
No 139
>3g5j_A Putative ATP/GTP binding protein; N-terminal domain of ATP/GTP binding protein, PSI, MCSG, STR genomics, protein structure initiative; HET: PGE; 1.76A {Clostridium difficile}
Probab=22.87 E-value=1e+02 Score=26.04 Aligned_cols=27 Identities=26% Similarity=0.473 Sum_probs=17.3
Q ss_pred CC-CeEEEEcC-CCCChhHHHHHHHHHHhcCC
Q 006472 200 SK-KYILVHCT-HGHNRTGYMIVHFLMRSQSM 229 (643)
Q Consensus 200 ~~-~~VlVHC~-~G~~RSG~li~aYLm~~~g~ 229 (643)
++ ..|+|+|. .| .||. . +++++...|+
T Consensus 87 ~~~~~ivvyC~~~G-~rs~-~-a~~~L~~~G~ 115 (134)
T 3g5j_A 87 LNYDNIVIYCARGG-MRSG-S-IVNLLSSLGV 115 (134)
T ss_dssp TTCSEEEEECSSSS-HHHH-H-HHHHHHHTTC
T ss_pred cCCCeEEEEECCCC-hHHH-H-HHHHHHHcCC
Confidence 45 89999995 66 5665 3 3444455665
No 140
>2gwf_A Ubiquitin carboxyl-terminal hydrolase 8; protein-protein complex, E3 ligase, protein ubiquitination, hydrolase, protease, UBL conjugation pathway; 2.30A {Homo sapiens} SCOP: c.46.1.4
Probab=22.01 E-value=1.7e+02 Score=26.18 Aligned_cols=81 Identities=6% Similarity=0.080 Sum_probs=38.2
Q ss_pred CCHHHHHHHHHHcCCCeeEEEEcCCCCCCCCcchhccCCc-EEEEeeccCCCCCCCHHHHHHHHHHH-HHHHHhcccCCC
Q 006472 125 YSFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEGI-KHVKIQCKGRDAVPDNASVNNFVYEV-TQFLSRQKHSKK 202 (643)
Q Consensus 125 ~~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~~gI-~y~~ip~~d~~~~P~~~~i~~f~~~v-~~fi~~~~~~~~ 202 (643)
-++.++.+.++..+.+ ..|||+... ++|....| .-+.||.......-+.+.+...+... ...+. ......
T Consensus 22 is~~~l~~~l~~~~~~-~~liDvR~~------~ey~~gHI~gAinip~~~l~~~~~~~~l~~~lp~~~~~l~~-~~~~~~ 93 (157)
T 2gwf_A 22 ITAKELYTMMTDKNIS-LIIMDARRM------QDYQDSCILHSLSVPEEAISPGVTASWIEAHLPDDSKDTWK-KRGNVE 93 (157)
T ss_dssp ECHHHHHHHHHSTTSC-EEEEECSCH------HHHHHSCBTTCEECCGGGCCTTCCHHHHHHTSCHHHHHHHH-TTTTSS
T ss_pred cCHHHHHHHHhcCCCC-eEEEECCCH------HHHHhcCccCCcccCHHHcCCCCcHHHHHHHcCHHHHHHHH-hcCCCC
Confidence 4678888776532223 469999843 34433222 23445653211001223333322111 11122 122345
Q ss_pred eEEEEcCCCCC
Q 006472 203 YILVHCTHGHN 213 (643)
Q Consensus 203 ~VlVHC~~G~~ 213 (643)
.|+|+|..|-.
T Consensus 94 ~VVvy~~~~~~ 104 (157)
T 2gwf_A 94 YVVLLDWFSSA 104 (157)
T ss_dssp EEEEECSSCCG
T ss_pred EEEEEcCCCCc
Confidence 69999988854
No 141
>3i2v_A Adenylyltransferase and sulfurtransferase MOCS3; rhodanese, UBA4, structural genomics, ubiquitin biology, structural genomics consortium, SGC; 1.25A {Homo sapiens}
Probab=21.93 E-value=61 Score=27.40 Aligned_cols=23 Identities=30% Similarity=0.352 Sum_probs=16.1
Q ss_pred CeEEEEcCCCCChhHHHHHHHHHHh
Q 006472 202 KYILVHCTHGHNRTGYMIVHFLMRS 226 (643)
Q Consensus 202 ~~VlVHC~~G~~RSG~li~aYLm~~ 226 (643)
..|+|+|..| .||. .++.+|...
T Consensus 73 ~~ivv~C~~G-~rs~-~a~~~L~~~ 95 (127)
T 3i2v_A 73 VPIYVICKLG-NDSQ-KAVKILQSL 95 (127)
T ss_dssp EEEEEECSSS-SHHH-HHHHHHHHH
T ss_pred CeEEEEcCCC-CcHH-HHHHHHHHh
Confidence 4899999988 4665 455555543
No 142
>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}
Probab=21.49 E-value=1e+02 Score=30.96 Aligned_cols=40 Identities=13% Similarity=0.135 Sum_probs=0.0
Q ss_pred HHHHHHHHh-cccCCCeEEEEcCCCCChhHHHHHHHHHHhcCCC
Q 006472 188 YEVTQFLSR-QKHSKKYILVHCTHGHNRTGYMIVHFLMRSQSMS 230 (643)
Q Consensus 188 ~~v~~fi~~-~~~~~~~VlVHC~~G~~RSG~li~aYLm~~~g~s 230 (643)
+.+.+.+.. ...++..|+|+|..|. ||. +++.+++..|++
T Consensus 240 ~~l~~~~~~~~~~~~~~iv~yC~sG~-rs~--~a~~~L~~~G~~ 280 (302)
T 3olh_A 240 EEIRHLFQEKKVDLSKPLVATCGSGV-TAC--HVALGAYLCGKP 280 (302)
T ss_dssp HHHHHHHHHTTCCTTSCEEEECSSSS-TTH--HHHHHHHTTTCC
T ss_pred HHHHHHHHhcCCCCCCCEEEECCChH-HHH--HHHHHHHHcCCC
No 143
>3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae}
Probab=21.37 E-value=88 Score=27.14 Aligned_cols=89 Identities=17% Similarity=0.281 Sum_probs=44.8
Q ss_pred CCHHHHHHHHHHcCCCeeEEEEcCCCCCCCCcchhccCCc-EEEEeeccCCCC--CCCHHHHHHHHHHHHHHHHh-cccC
Q 006472 125 YSFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEGI-KHVKIQCKGRDA--VPDNASVNNFVYEVTQFLSR-QKHS 200 (643)
Q Consensus 125 ~~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~~gI-~y~~ip~~d~~~--~P~~~~i~~f~~~v~~fi~~-~~~~ 200 (643)
-++.++.+.+.....+ ..|||+... .++....| .-+.+|...... .++.+.+. +.+.. ...+
T Consensus 25 is~~el~~~l~~~~~~-~~liDvR~~------~e~~~ghIpgAinip~~~l~~~~~~~~~~~~-------~~~~~~~~~~ 90 (139)
T 3d1p_A 25 YSFEDMKRIVGKHDPN-VVLVDVREP------SEYSIVHIPASINVPYRSHPDAFALDPLEFE-------KQIGIPKPDS 90 (139)
T ss_dssp CCHHHHHHHHHHTCTT-EEEEECSCH------HHHHHCCCTTCEECCTTTCTTGGGSCHHHHH-------HHHSSCCCCT
T ss_pred ecHHHHHHHHhCCCCC-eEEEECcCH------HHHhCCCCCCcEEcCHHHhhhhccCCHHHHH-------HHHhccCCCC
Confidence 4677887766542223 469999843 33332222 124566643200 11111222 11211 1245
Q ss_pred CCeEEEEcCCCCChhHHHHHHHHHHhcCCC
Q 006472 201 KKYILVHCTHGHNRTGYMIVHFLMRSQSMS 230 (643)
Q Consensus 201 ~~~VlVHC~~G~~RSG~li~aYLm~~~g~s 230 (643)
+..|+|+|..| .||. .++.+|. ..|++
T Consensus 91 ~~~ivvyC~~G-~rs~-~aa~~L~-~~G~~ 117 (139)
T 3d1p_A 91 AKELIFYCASG-KRGG-EAQKVAS-SHGYS 117 (139)
T ss_dssp TSEEEEECSSS-HHHH-HHHHHHH-TTTCC
T ss_pred CCeEEEECCCC-chHH-HHHHHHH-HcCCC
Confidence 78999999998 4654 4444454 46763
No 144
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=21.05 E-value=76 Score=31.21 Aligned_cols=28 Identities=21% Similarity=0.373 Sum_probs=18.9
Q ss_pred cCCCeEEEEcCCCCChhHHHHHHHHHH-hcCC
Q 006472 199 HSKKYILVHCTHGHNRTGYMIVHFLMR-SQSM 229 (643)
Q Consensus 199 ~~~~~VlVHC~~G~~RSG~li~aYLm~-~~g~ 229 (643)
.++..|+|+|..|. ||+ .+ ++++. ..|+
T Consensus 231 ~~~~~ivvyC~~G~-rs~-~a-~~~L~~~~G~ 259 (285)
T 1uar_A 231 TKDKDIVVYCRIAE-RSS-HS-WFVLKYLLGY 259 (285)
T ss_dssp CTTSEEEEECSSHH-HHH-HH-HHHHHTTSCC
T ss_pred CCCCCEEEECCchH-HHH-HH-HHHHHHHcCC
Confidence 46789999999884 654 33 44444 5676
No 145
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=20.42 E-value=1.3e+02 Score=29.42 Aligned_cols=45 Identities=13% Similarity=0.083 Sum_probs=26.1
Q ss_pred CCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHHHhcCC
Q 006472 177 VPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRSQSM 229 (643)
Q Consensus 177 ~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~li~aYLm~~~g~ 229 (643)
.|+.+.+.+.+..+ ...++..|+|+|..| +|++..++..| ...|+
T Consensus 68 ~~~~~~~~~~~~~~------gi~~~~~ivvyc~~g-~~~a~~a~~~L-~~~G~ 112 (280)
T 1urh_A 68 LPRPETFAVAMREL------GVNQDKHLIVYDEGN-LFSAPRAWWML-RTFGV 112 (280)
T ss_dssp CCCHHHHHHHHHHT------TCCTTSEEEEECSSS-CSSHHHHHHHH-HHTTC
T ss_pred CCCHHHHHHHHHHc------CCCCCCeEEEECCCC-CccHHHHHHHH-HHcCC
Confidence 45555555443221 134678999999998 46444444444 45676
No 146
>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A
Probab=20.15 E-value=1e+02 Score=30.03 Aligned_cols=29 Identities=0% Similarity=0.002 Sum_probs=19.2
Q ss_pred cCCCeEEEEcCCCCChhHHHHHHHHHHhcCC
Q 006472 199 HSKKYILVHCTHGHNRTGYMIVHFLMRSQSM 229 (643)
Q Consensus 199 ~~~~~VlVHC~~G~~RSG~li~aYLm~~~g~ 229 (643)
.++..|+|+|..|. +.+. .+++++...|+
T Consensus 75 ~~~~~vvvyc~~g~-~~s~-~a~~~L~~~G~ 103 (277)
T 3aay_A 75 ANEDTVILYGGNNN-WFAA-YAYWYFKLYGH 103 (277)
T ss_dssp CTTSEEEEECSGGG-HHHH-HHHHHHHHTTC
T ss_pred CCCCeEEEECCCCC-chHH-HHHHHHHHcCC
Confidence 45689999999883 3333 34555556676
Done!