Query         006472
Match_columns 643
No_of_seqs    442 out of 2285
Neff          7.0 
Searched_HMMs 13730
Date          Tue Mar 26 01:59:17 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006472.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/006472hhsearch_scop -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1i9sa_ c.45.1.1 (A:) mRNA cap 100.0 9.4E-42 6.8E-46  333.4  20.5  191   85-278     1-191 (194)
  2 d1p16a2 d.142.2.3 (A:1-245) mR 100.0 1.8E-39 1.3E-43  327.8  15.4  204  305-515    34-245 (245)
  3 d1ckma2 d.142.2.3 (A:11-238) R 100.0 1.3E-35 9.8E-40  296.7  17.3  182  306-515    41-228 (228)
  4 d1ohea2 c.45.1.1 (A:199-380) P  99.9 5.7E-23 4.2E-27  197.5  17.6  144  100-258    22-165 (182)
  5 d1x9na3 d.142.2.1 (A:534-753)   99.9 6.6E-23 4.8E-27  202.7  15.2  177  316-515    14-215 (220)
  6 d1rxda_ c.45.1.1 (A:) Protein   99.9   1E-21 7.5E-26  182.8  14.9  137  102-259     9-145 (152)
  7 d1mkpa_ c.45.1.1 (A:) Mapk pho  99.8   3E-20 2.2E-24  171.2   8.8  116  139-261    28-143 (144)
  8 d1d5ra2 c.45.1.1 (A:14-187) Ph  99.8   8E-19 5.8E-23  166.9  17.8  148  100-259    15-166 (174)
  9 d1vhra_ c.45.1.1 (A:) VH1-rela  99.8 9.6E-20   7E-24  174.0  11.2  121  139-264    47-172 (178)
 10 d1ckma1 b.40.4.6 (A:239-327) R  99.8 1.4E-19   1E-23  150.9   9.8   86  517-612     2-87  (89)
 11 d1p16a1 b.40.4.6 (A:246-390) m  99.8 1.7E-19 1.3E-23  165.8  11.0  100  516-617     1-132 (145)
 12 d1fpza_ c.45.1.1 (A:) Kinase a  99.8 3.7E-19 2.7E-23  169.7  11.9  126  131-263    40-173 (176)
 13 d1m3ga_ c.45.1.1 (A:) Mapk pho  99.8 3.6E-20 2.6E-24  171.2   2.7  116  139-263    28-143 (145)
 14 d1a0ia2 d.142.2.1 (A:2-240) AT  99.7 7.3E-18 5.4E-22  167.5   9.2  179  316-513    10-239 (239)
 15 d1fvia2 d.142.2.1 (A:2-189) AT  99.5 1.1E-14   8E-19  139.3   9.3  153  330-513    19-187 (188)
 16 d1xria_ c.45.1.1 (A:) Putative  99.4 3.9E-13 2.8E-17  124.0   7.4  111  126-243    22-133 (151)
 17 d2pt0a1 c.45.1.4 (A:34-346) My  98.9   3E-09 2.2E-13  108.5  11.0   80  158-243   175-255 (313)
 18 d1g4us2 c.45.1.2 (S:297-539) S  98.6 7.2E-08 5.3E-12   94.9  11.7   89  171-259   143-238 (243)
 19 d1lara2 c.45.1.2 (A:1628-1876)  98.5 6.2E-07 4.5E-11   88.3  15.0  142  102-258    54-241 (249)
 20 d1fpra_ c.45.1.2 (A:) Tyrosine  98.5 2.9E-07 2.1E-11   92.5  12.5   85  172-257   176-268 (284)
 21 d1lara1 c.45.1.2 (A:1307-1623)  98.5 7.6E-07 5.5E-11   90.9  15.5   84  172-258   183-271 (317)
 22 d1p15a_ c.45.1.2 (A:) Protein-  98.5 1.8E-07 1.3E-11   92.0  10.3   87  171-259   148-239 (245)
 23 d1jlna_ c.45.1.2 (A:) Tyrosine  98.5 6.7E-07 4.9E-11   90.5  14.1   87  171-258   193-284 (297)
 24 d1rpma_ c.45.1.2 (A:) Tyrosine  98.5 6.4E-07 4.7E-11   89.7  13.8   84  172-258   184-272 (278)
 25 d1s68a_ d.142.2.4 (A:) RNA lig  98.4 4.5E-07 3.3E-11   88.3  11.4  183  326-514    24-228 (233)
 26 d1wcha_ c.45.1.2 (A:) Tyrosine  98.4 5.1E-07 3.7E-11   91.9  11.5   83  171-258   207-294 (308)
 27 d2shpa1 c.45.1.2 (A:219-525) T  98.4 7.4E-07 5.4E-11   90.6  11.9   87  171-258   205-299 (307)
 28 d1l8ka_ c.45.1.2 (A:) Tyrosine  98.3 1.4E-06   1E-10   86.8  10.9   86  172-258   177-267 (273)
 29 d2f71a1 c.45.1.2 (A:2-298) Tyr  98.2 1.5E-06 1.1E-10   87.8  10.7   85  172-257   179-271 (297)
 30 d1lyva_ c.45.1.2 (A:) Protein-  98.2 2.2E-06 1.6E-10   85.9  11.9   63  200-262   210-276 (283)
 31 d1yfoa_ c.45.1.2 (A:) Tyrosine  98.2 2.8E-06   2E-10   85.3  10.2   83  172-257   193-280 (288)
 32 d1ywfa1 c.45.1.5 (A:4-275) Pho  97.9 6.4E-06 4.6E-10   82.0   8.0   41  200-241   149-189 (272)
 33 d1ohea1 c.45.1.1 (A:42-198) Pr  97.3 0.00041   3E-08   62.4   9.3   71  172-244    46-120 (157)
 34 d1b04a_ d.142.2.2 (A:) Adenyla  92.6     0.7 5.1E-05   45.2  14.0  161  328-515   104-310 (312)
 35 d1ta8a_ d.142.2.2 (A:) Adenyla  91.8    0.91 6.6E-05   44.3  13.7  158  329-515   108-313 (313)
 36 d1dgsa3 d.142.2.2 (A:1-314) Ad  89.6       2 0.00014   41.9  13.8  158  330-515   109-314 (314)
 37 d1xdna_ d.142.2.4 (A:) RNA edi  82.7     6.7 0.00049   36.8  12.5  109  324-433    23-185 (265)
 38 d1qxna_ c.46.1.3 (A:) Polysulf  79.8     1.2 8.8E-05   37.9   5.8   83  125-229    25-107 (137)
 39 d1rhsa2 c.46.1.2 (A:150-293) R  67.5     3.7 0.00027   35.0   5.8   93  125-230    13-117 (144)
 40 d1zsqa2 c.45.1.3 (A:199-585) M  65.6     3.9 0.00028   40.9   6.3   25  200-224   211-235 (387)
 41 d1yt8a4 c.46.1.2 (A:243-372) T  61.5      11 0.00077   31.1   7.5   81  125-229    25-105 (130)
 42 d1gmxa_ c.46.1.3 (A:) Sulfurtr  55.5      15  0.0011   28.9   7.3   77  126-230     8-84  (108)
 43 d1yt8a1 c.46.1.2 (A:107-242) T  40.9      37  0.0027   27.8   7.7   80  125-229    26-105 (136)
 44 d1skza1 g.3.15.1 (A:7-58) Fact  37.3       2 0.00015   28.8  -1.1   19  198-216    21-39  (52)
 45 d1tq1a_ c.46.1.3 (A:) Thiosulf  36.8      10 0.00074   30.6   3.1   29  199-230    70-98  (119)
 46 d2gwfa1 c.46.1.4 (A:181-315) U  36.1      33  0.0024   27.6   6.5   84  126-215     4-87  (135)
 47 d1yt8a2 c.46.1.2 (A:6-106) Thi  33.9      79  0.0058   23.7   8.3   29  199-230    56-84  (101)
 48 d3e46a1 a.5.2.1 (A:157-198) Ub  27.5      28   0.002   22.3   3.3   28  208-238    14-41  (42)
 49 d1iiba_ c.44.2.1 (A:) Enzyme I  23.2     9.9 0.00072   30.4   0.5   16  202-218     2-17  (103)
 50 d2jfga1 c.5.1.1 (A:1-93) UDP-N  22.5      31  0.0023   26.1   3.6   27  200-230     4-30  (93)
 51 d1e0ca2 c.46.1.2 (A:136-271) S  20.9      43  0.0031   27.4   4.3   30  198-230    85-114 (136)

No 1  
>d1i9sa_ c.45.1.1 (A:) mRNA capping enzyme, triphosphatase domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00  E-value=9.4e-42  Score=333.42  Aligned_cols=191  Identities=38%  Similarity=0.763  Sum_probs=178.2

Q ss_pred             CCCCCCccCCCCCCcccCceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCeeEEEEcCCCCCCCCcchhccCCc
Q 006472           85 KLPPGWLDCPPFGQEIGGCIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEGI  164 (643)
Q Consensus        85 ~~p~~W~~~~~~g~~I~~~flp~k~Pl~~~~~~~i~~~~~~~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~~gI  164 (643)
                      +||.+|++||++|++|+++|||||+|+++.++..++.+.+|++.+++++++..+.++++|||||++.++|++++|+..||
T Consensus         1 klP~~W~~~~~~~~~I~~~fIa~k~Pl~~~~~~~i~~~~~~~~~~v~~~~~~~~~~~~~vinlt~~~~~Y~~~~~~~~gi   80 (194)
T d1i9sa_           1 KIPPRWLNCPRRGQPVAGRFLPLKTMLGPRYDSQVAEENRFHPSMLSNYLKSLKVKMSLLVDLTNTSRFYDRNDIEKEGI   80 (194)
T ss_dssp             CCCTTCTTSCSBCCCBTTTEEEECCCCCGGGTTTSCGGGCCCHHHHHHHHHHTTCCEEEEEECSSCSSSSCTHHHHTTTC
T ss_pred             CCCchhhcCCCCCCEeCCCEEEecCCCCcCcccccCccccCCHHHHHHHHHhhCCCceEEEEccCCCCCcCHHHHHhcCc
Confidence            58999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHHHhcCCCHHHHHHHHHhcCCC
Q 006472          165 KHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRSQSMSVAQAIKKFAEVRPP  244 (643)
Q Consensus       165 ~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~li~aYLm~~~g~s~~eAi~~~~~~Rp~  244 (643)
                      .|+++|+.|.+.+|+.+.+..|++.+..|++  ..+++.|+|||++|+||||+|||||||++.||++++|++.|+++||+
T Consensus        81 ~~~~~~~~~~~~~P~~~~~~~f~~~v~~~~~--~~~~~~V~VHC~~G~~Rsg~~i~ayL~~~~~~s~~~Ai~~~~~~Rp~  158 (194)
T d1i9sa_          81 KYIKLQCKGHGECPTTENTETFIRLCERFNE--RSPPELIGVHCTHGFNRTGFLICAFLVEKMDWSIEAAVATFAQARPP  158 (194)
T ss_dssp             EEEECCCCCTTCCCCHHHHHHHHHHHTTC-------CCEEEEECSSSSHHHHHHHHHHHHHHHCCCHHHHHHHHHHHSTT
T ss_pred             eEEEecCCCCCCCCChHHHHHHHHHHHHHHH--hCCCCeEEEECCCCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHCCC
Confidence            9999999887678999999999999988887  45688999999999999999999999999999999999999999999


Q ss_pred             ccCCHHHHHHHHHHHhccCCCCCCCCCCCccccc
Q 006472          245 GIYKNEYIEALYTFYHEKRLDSTPCPSTPEWKRE  278 (643)
Q Consensus       245 ~i~~~~~l~~L~~~y~~~~~~~~~~p~~P~W~~~  278 (643)
                      ++++++|+++|.++|.+... .+++|++|+|+++
T Consensus       159 ~i~~~~~~~~L~~~y~~~~~-~~~~~~~p~w~~~  191 (194)
T d1i9sa_         159 GIYKGDYLKELFRRYGDIEE-APPPPVLPDWCFE  191 (194)
T ss_dssp             CCCCHHHHHHHHHHHSCGGG-CCCCCCCCGGGGT
T ss_pred             CCCCHHHHHHHHHHHHhhcc-CCCCCCCCCccCC
Confidence            99999999999999999886 6789999999974


No 2  
>d1p16a2 d.142.2.3 (A:1-245) mRNA capping enzyme alpha subunit {Yeast (Candida albicans) [TaxId: 5476]}
Probab=100.00  E-value=1.8e-39  Score=327.84  Aligned_cols=204  Identities=33%  Similarity=0.564  Sum_probs=166.4

Q ss_pred             CCCCCCCCCCcccccchhhhh-hhcccceeeeecCceeEEEEEEEC-----CEEEEEeCCCccccc-cCCCCCcCCcccc
Q 006472          305 GRGNMQFPGSHPVSLNSDNLQ-LLRQRYYYATWKADGTRYMMLITI-----DGCYLIDRCFNFRRV-QMRFPCRNSNEGL  377 (643)
Q Consensus       305 ~~~~~~FPGsqPVslsr~~l~-~l~~~~Y~V~eK~DG~R~ll~i~~-----~~vyLidR~~~~~~v-~~~FP~~~~~~~~  377 (643)
                      +|...+|||||||||+|+|+. .|.+++|+||||+||+||||+++.     +++|++||+++++.+ ...||........
T Consensus        34 ~~~~~~FpG~qPvs~~~~~~~~~L~~~~Y~v~eK~DG~R~lL~i~~~~~~~~~~~li~R~~~~~~~~~~~~~~~~~~~~~  113 (245)
T d1p16a2          34 GRRNTGFPGSQPVSFERRHLEETLMQKDYFVCEKTDGLRCLLFLINDPDKGEGVFLVTRENDYYFIPNIHFPLSVNETRE  113 (245)
T ss_dssp             TCSCCSCCCEEEEECCHHHHHTHHHHSCEEEEEEECSEEEEEEEEEETTTEEEEEEEETTCCEEECCSCCCCSCTTCCSS
T ss_pred             CCCCCCCCCCCcccccHHHHHhhhCcCCEEEEECcCCeEEEEEEEEcCCCceEEEEEeCCCCeEEccccccccccccccc
Confidence            888899999999999999996 488889999999999999999963     368999999985544 5777765443333


Q ss_pred             cccCCCCeEeeEEEEEecCCCCCCcceEEEEeEeeecCCeeccCCCHHHHHHHHHHHhcCccccccccccccCCCC-ccC
Q 006472          378 GEKTHHFTLLDGEMIIDKLPDSRRQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNPY-YRY  456 (643)
Q Consensus       378 ~~~~~~~tlLDGElV~d~~~~~~~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~v~~p~~~~~~~~~~~~~p~-~~~  456 (643)
                      ....+.+|+||||+|.++.... ...++|+|||+++++|+++++.||.+|+.+|++.+..+.....+.     .+. ...
T Consensus       114 ~~~~~~~tilDGElv~~~~~~~-~~~~~~~ifDil~~~g~~l~~~~l~~R~~~l~~~i~~~~~~~~~~-----~~~~~~~  187 (245)
T d1p16a2         114 KPTYHHGTLLDGELVLENRNVS-EPVLRYVIFDALAIHGKCIIDRPLPKRLGYITENVMKPFDNFKKH-----NPDIVNS  187 (245)
T ss_dssp             SCCCCSSEEEEEEEEEECCSSS-CCEEEEEEEEEEEETTEECTTSCHHHHHHHHHHHTHHHHHHHHHH-----CHHHHSC
T ss_pred             cccccCCeeEEEEEEeecccCC-cceEEEEEeeehhhCCceeeeccHHHHHHHHHHHHHHhhhhhhhc-----ccccccc
Confidence            3345689999999999875433 246899999999999999999999999999999887664322210     000 112


Q ss_pred             CCCCcEEEecceeechhHHHHHHHhcccccCCCceEEEEeCCCCCccCCCCCeEEEecC
Q 006472          457 DLEPFRVRRKDFWLLSTVNKLLKEFIPKLSHDADGLVFQGWDDPYVPRTHEGLLKWKYA  515 (643)
Q Consensus       457 ~~~pf~I~~K~~~~~~~~~~ll~~~~~~l~h~~DGLIf~p~~spY~~G~~~~llKWKP~  515 (643)
                      ...+|.+..|+++.++....+++ .++.+.|++|||||||.++||++||+..||||||.
T Consensus       188 ~~~~~~~~~k~~~~~~~~~~l~~-~~~~~~~~~DGLIf~p~~~pY~~Gr~~~~lKWKP~  245 (245)
T d1p16a2         188 PEFPFKVGFKTMLTSYHADDVLS-KMDKLFHASDGLIYTCAETPYVFGTDQTLLKWKPA  245 (245)
T ss_dssp             TTSCCEEEECCCEEGGGTHHHHT-TGGGCSSCEEEEEEEESSSCCCSEEEEEEEEECCG
T ss_pred             hhhhhhhhhhhhhhHHHHHHHHH-HhhhcCCCCCeEEEEcCCCCEeCCCCCCeEEeCCC
Confidence            34678999999999999999887 46889999999999999999999999999999984


No 3  
>d1ckma2 d.142.2.3 (A:11-238) RNA guanylyltransferase (mRNA capping enzyme), N-terminal domain {Chlorella virus PBCV-1 [TaxId: 10506]}
Probab=100.00  E-value=1.3e-35  Score=296.69  Aligned_cols=182  Identities=23%  Similarity=0.411  Sum_probs=152.0

Q ss_pred             CCCCCCCCCcccccchhhhhhhcccceeeeecCceeEEEEEEEC----CEEEEEeCCCcccccc-CCCCCcCCccccccc
Q 006472          306 RGNMQFPGSHPVSLNSDNLQLLRQRYYYATWKADGTRYMMLITI----DGCYLIDRCFNFRRVQ-MRFPCRNSNEGLGEK  380 (643)
Q Consensus       306 ~~~~~FPGsqPVslsr~~l~~l~~~~Y~V~eK~DG~R~ll~i~~----~~vyLidR~~~~~~v~-~~FP~~~~~~~~~~~  380 (643)
                      +...+|||+|||||+++|+..|..++|+||||+||+|++|+++.    +.+|++||++.++..+ ..+|         +.
T Consensus        41 ~~~~~f~g~~pvsl~~~~~~~l~~~~Y~vseK~DG~R~ll~~~~~~~~~~~~li~r~~~~~~~~~~~~~---------~~  111 (228)
T d1ckma2          41 HKFPRLPGPNPVSIERKDFEKLKQNKYVVSEKTDGIRFMMFFTRVFGFKVCTIIDRAMTVYLLPFKNIP---------RV  111 (228)
T ss_dssp             CSSCCCSSEEEEECCGGGHHHHHHSCEEEEEEECSEEEEEEEEEETTEEEEEEECTTCCEEECCCSCCC---------TT
T ss_pred             CCCCcCCCCCCcccchHHHhhhccCCeEEEEeecCEEEEEEEEecCCceEEEEEeCCCceEEcccccCc---------hh
Confidence            44578999999999999999999999999999999999999974    3689999999865433 1221         12


Q ss_pred             CCCCeEeeEEEEEecCCCCCCcceEEEEeEeeecCCeeccCCCHHHHHHHHHHHhcCccccccccccccCCCCccCCCCC
Q 006472          381 THHFTLLDGEMIIDKLPDSRRQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLEP  460 (643)
Q Consensus       381 ~~~~tlLDGElV~d~~~~~~~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~v~~p~~~~~~~~~~~~~p~~~~~~~p  460 (643)
                      ...+||||||+|.++..    ..+.|+||||++++|.++++.||.+|+.+|++.+.....               ....+
T Consensus       112 ~~~~ti~DGEli~~~~~----~~~~f~ifD~l~~~g~~~~~~pf~~Rl~~L~~~l~~~~~---------------~~~~~  172 (228)
T d1ckma2         112 LFQGSIFDGELCVDIVE----KKFAFVLFDAVVVSGVTVSQMDLASRFFAMKRSLKEFKN---------------VPEDP  172 (228)
T ss_dssp             GGGCEEEEEEEEEETTT----TEEEEEEEEEEEETTEECTTSCHHHHHHHHHHHHTTCCC---------------CTTSS
T ss_pred             hcCCceEeEEEEeeccc----ccceEEEeeEEEEcCcchhcCChHHHHHHHHHHHhhhhc---------------cccCc
Confidence            35789999999987643    367899999999999999999999999999997754321               12356


Q ss_pred             cEEEecceeechhHHHHHHHh-cccccCCCceEEEEeCCCCCccCCCCCeEEEecC
Q 006472          461 FRVRRKDFWLLSTVNKLLKEF-IPKLSHDADGLVFQGWDDPYVPRTHEGLLKWKYA  515 (643)
Q Consensus       461 f~I~~K~~~~~~~~~~ll~~~-~~~l~h~~DGLIf~p~~spY~~G~~~~llKWKP~  515 (643)
                      +.++.++|++......+++.+ .....|++|||||+|.++||++||+..||||||.
T Consensus       173 ~~i~~k~~~~~~~~~~l~~~~~~~~~~y~~DGLIf~p~~~pY~~Gr~~~~~KWKP~  228 (228)
T d1ckma2         173 AILRYKEWIPLEHPTIIKDHLKKANAIYHTDGLIIMSVDEPVIYGRNFNLFKLKPG  228 (228)
T ss_dssp             SEEEECCCEETTCHHHHHHHHHHHHHHSCEEEEEEEESSSCCCCEEEEEEEEECST
T ss_pred             eeEEeeeeeehhhHHHHHHHHhhhccCCCCceEEEEeCCCCEeCCCCCCeEEeCCC
Confidence            789999999999988887754 3467899999999999999999999999999995


No 4  
>d1ohea2 c.45.1.1 (A:199-380) Proline directed phosphatase CDC14b2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.89  E-value=5.7e-23  Score=197.45  Aligned_cols=144  Identities=22%  Similarity=0.276  Sum_probs=117.7

Q ss_pred             ccCceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCeeEEEEcCCCCCCCCcchhccCCcEEEEeeccCCCCCCC
Q 006472          100 IGGCIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPD  179 (643)
Q Consensus       100 I~~~flp~k~Pl~~~~~~~i~~~~~~~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~  179 (643)
                      ++++||+|+.|.........  ....++.++++.++.  .+|++||||+  .+.|+++.+...||+|+++|++|+ .+|+
T Consensus        22 ~P~~~ia~s~P~~~~~~~~~--~~~~~~~~~l~~l~~--~gi~~Ii~l~--~~~~~~~~~~~~gi~~~~~p~~D~-~~P~   94 (182)
T d1ohea2          22 IPDRFIAFCGPHSRARLESG--YHQHSPETYIQYFKN--HNVTTIIRLN--KRMYDAKRFTDAGFDHHDLFFADG-STPT   94 (182)
T ss_dssp             ETTTEEEECCCCSSCBCSTT--CCBCCTHHHHHHHHH--TTEEEEEECS--CCSSCTHHHHTTTCEEEECCCCTT-CCCC
T ss_pred             ccCCeEEEcCCCcccccccc--ccccCHHHHHHHHHh--cCCCEEEEec--CCCcCccccccCCcEEEecCCCCC-CCcC
Confidence            46889999999776554332  234668888888876  4699999999  457889999999999999999997 6899


Q ss_pred             HHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHHHhcCCCHHHHHHHHHhcCCCccCCHHHHHHHHHH
Q 006472          180 NASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTF  258 (643)
Q Consensus       180 ~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~li~aYLm~~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~  258 (643)
                      .+.+.+|++.+       ...+++|+|||++|+||||+++|||||...||++++|++.++++||.++..+.+ ..|..+
T Consensus        95 ~~~i~~~i~~~-------~~~~~~V~VHC~~G~gRsgt~~a~yL~~~~~~~~~~Al~~vr~~Rp~~i~~~qq-~fl~~~  165 (182)
T d1ohea2          95 DAIVKEFLDIC-------ENAEGAIAVHSKAGLGRTGTLIACYIMKHYRMTAAETIAWVRICRPGSVIGPQQ-QFLVMK  165 (182)
T ss_dssp             HHHHHHHHHHH-------HSCSSEEEEECSSSSHHHHHHHHHHHHHHHCCCHHHHHHHHHHHSTTCSCTHHH-HHHHHH
T ss_pred             HHHHHHHHHHH-------HcCCCcEEEEeCCCCcchHHHHHHHHHHHcCCCHHHHHHHHHHHCCCCccCHHH-HHHHHH
Confidence            88877776543       346889999999999999999999999999999999999999999998876543 444433


No 5  
>d1x9na3 d.142.2.1 (A:534-753) DNA ligase I (LIG1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.88  E-value=6.6e-23  Score=202.72  Aligned_cols=177  Identities=15%  Similarity=0.188  Sum_probs=121.9

Q ss_pred             ccccchhhhhhhcccceeeeecCceeEEEEEEE-CCEEEEEeCCCccccccCCCCCcCCc-ccccccCCCCeEeeEEEEE
Q 006472          316 PVSLNSDNLQLLRQRYYYATWKADGTRYMMLIT-IDGCYLIDRCFNFRRVQMRFPCRNSN-EGLGEKTHHFTLLDGEMII  393 (643)
Q Consensus       316 PVslsr~~l~~l~~~~Y~V~eK~DG~R~ll~i~-~~~vyLidR~~~~~~v~~~FP~~~~~-~~~~~~~~~~tlLDGElV~  393 (643)
                      |++.-.+.+..+...+|+|++|+||+||++++. ++++.+++|++.  .++..||+.... ..+......+.+||||||.
T Consensus        14 ~~~~~~~~~~~~~~~~~~~e~K~DG~R~~i~~~~~~~v~l~SR~g~--~~t~~~p~l~~~~~~~~~~~~~~~iLDGEl~~   91 (220)
T d1x9na3          14 PTRGISEVLKRFEEAAFTCEYKYDGQRAQIHALEGGEVKIFSRNQE--DNTGKYPDIISRIPKIKLPSVTSFILDTEAVA   91 (220)
T ss_dssp             EESSHHHHHHHTTTSCEEEEEEESSEEEEEEECTTSCEEEECTTSC--BCTTTCHHHHHTSGGGBCTTCCCEEEEEEEEE
T ss_pred             CCCChHHHHhhcCCCcEEEEEeECcEEEEEEEECCCEEEEEeCCCc--cccccchhHHHHHHHhhcCCCcceeeeeeeEE
Confidence            333334445666778999999999999998875 567999999997  335577754221 1111112357899999987


Q ss_pred             ecCCCC--------------------CCcceEEEEeEeeecCCeeccCCCHHHHHHHHHHHhcCccccccccccccCCCC
Q 006472          394 DKLPDS--------------------RRQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNPY  453 (643)
Q Consensus       394 d~~~~~--------------------~~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~v~~p~~~~~~~~~~~~~p~  453 (643)
                      ....+.                    ....+.|+|||||+++|++++++||.+|+++|++.+.....             
T Consensus        92 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vFDil~~~g~~~~~~p~~eR~~~L~~~~~~~~~-------------  158 (220)
T d1x9na3          92 WDREKKQIQPFQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRENFVETEG-------------  158 (220)
T ss_dssp             ECTTTCSBCCHHHHTTSCSSCCCGGGCCSEEEEEEEEEEEETTEECTTSCHHHHHHHHHHHBCCBTT-------------
T ss_pred             ecCCCCccchHHHHhhhhhcccchhhhccccceEEEEEEEECCcchhhhhHHHHHHHHHHHhccCCC-------------
Confidence            432110                    01347899999999999999999999999999986532110             


Q ss_pred             ccCCCCCcEEEecceeechhHHHHHHHhcccccCCCceEEEEe--CCCCCccCC-CCCeEEEecC
Q 006472          454 YRYDLEPFRVRRKDFWLLSTVNKLLKEFIPKLSHDADGLVFQG--WDDPYVPRT-HEGLLKWKYA  515 (643)
Q Consensus       454 ~~~~~~pf~I~~K~~~~~~~~~~ll~~~~~~l~h~~DGLIf~p--~~spY~~G~-~~~llKWKP~  515 (643)
                            +  +.....+..++.+++.+-+...+.++.||||+|.  .+++|.+|+ +..|+||||.
T Consensus       159 ------~--~~~~~~~~~~~~~~~~~~~~~~~~~g~EGim~K~~~~~s~Y~~GkRs~~w~K~K~e  215 (220)
T d1x9na3         159 ------E--FVFATSLDTKDIEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKD  215 (220)
T ss_dssp             ------T--EEECCEECCCCHHHHHHHHHHHHHTSEEEEEEEESSSSCSSCTTTCSEEEEEEEHH
T ss_pred             ------e--EEEEEeeccCCHHHHHHHHHHHHHCCCceEEEeccCCCCCeecCCcCCCeEEEccc
Confidence                  1  3333444444444433333345678999999994  589999994 7789999984


No 6  
>d1rxda_ c.45.1.1 (A:) Protein tyrosine phosphatase type IVa {Human (Homo sapiens), pr-1 [TaxId: 9606]}
Probab=99.86  E-value=1e-21  Score=182.84  Aligned_cols=137  Identities=19%  Similarity=0.279  Sum_probs=114.7

Q ss_pred             CceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCeeEEEEcCCCCCCCCcchhccCCcEEEEeeccCCCCCCCHH
Q 006472          102 GCIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNA  181 (643)
Q Consensus       102 ~~flp~k~Pl~~~~~~~i~~~~~~~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~~  181 (643)
                      .+||.+..|+..+..            +.++.+..  .+|.+||+|+  ++.|+++.++..||+|+++|+.|+ .+|+.+
T Consensus         9 ~rfI~tq~P~~~t~~------------~f~~~l~~--~~i~~Iv~l~--e~~y~~~~~~~~~i~~~~~~~~d~-~~p~~~   71 (152)
T d1rxda_           9 MRFLITHNPTNATLN------------KFIEELKK--YGVTTIVRVC--EATYDTTLVEKEGIHVLDWPFDDG-APPSNQ   71 (152)
T ss_dssp             EEEEECCCCCGGGHH------------HHHHHHHH--TTEEEEEECS--CCCSCCHHHHHTTCEEEECCC--C-CCCCHH
T ss_pred             ceEEEECCCCchhHH------------HHHHHHHH--hCCeEEeecc--cccCCchheeecceEEEEeeCCCC-CCCCHH
Confidence            479999999876544            44444444  5799999998  457899999999999999999996 789999


Q ss_pred             HHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHHHhcCCCHHHHHHHHHhcCCCccCCHHHHHHHHHHH
Q 006472          182 SVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFY  259 (643)
Q Consensus       182 ~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~li~aYLm~~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y  259 (643)
                      .+..|+..+..++.  ..++++|+|||++|+||||+++|||||. .||++++|++.++++||+++. ..|+..|..|.
T Consensus        72 ~~~~~~~~~~~~~~--~~~~~~v~VHC~~G~gRsg~~~a~~l~~-~~~~~~~av~~vr~~R~~~i~-~~Q~~fl~~y~  145 (152)
T d1rxda_          72 IVDDWLSLVKIKFR--EEPGCCIAVHCVAGLGRAPVLVALALIE-GGMKYEDAVQFIRQKRRGAFN-SKQLLYLEKYR  145 (152)
T ss_dssp             HHHHHHHHHHHHHH--HSTTCEEEEECSSSSTTHHHHHHHHHHH-TTCCHHHHHHHHHTTCTTCCC-HHHHHHHHHCC
T ss_pred             HHHHHHHHHHHHHH--hCCCCCEEEEEcCCcccHHHHHHHHHHH-hCcCHHHHHHHHHHhCCCCCc-hHHHHHHHHHH
Confidence            99999999988887  4568999999999999999999999998 699999999999999998875 45777776643


No 7  
>d1mkpa_ c.45.1.1 (A:) Mapk phosphatase {Human (Homo sapiens), pyst1 (mkp3) [TaxId: 9606]}
Probab=99.80  E-value=3e-20  Score=171.24  Aligned_cols=116  Identities=16%  Similarity=0.188  Sum_probs=97.9

Q ss_pred             CCeeEEEEcCCCCCCCCcchhccCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHH
Q 006472          139 RKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYM  218 (643)
Q Consensus       139 ~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~l  218 (643)
                      .+|++|||++.+.+.+   .....++.|+++|+.|.+. +   .+.+++..+.+||+++...+++|+|||.+|+||||++
T Consensus        28 ~gI~~Iin~~~~~~~~---~~~~~~~~y~~~~~~D~~~-~---~i~~~~~~~~~~i~~~~~~~~~VlVHC~~G~~RS~~v  100 (144)
T d1mkpa_          28 FGIKYILNVTPNLPNL---FENAGEFKYKQIPISDHWS-Q---NLSQFFPEAISFIDEARGKNCGVLVHSLAGISRSVTV  100 (144)
T ss_dssp             TTEEEEEECCSSCCCE---EEEETTEEEEECCCCCSTT-C---CSGGGHHHHHHHHHHHHHTTCEEEEECSSCSHHHHHH
T ss_pred             CCCcEEEEccccCCcc---ccCCCceEEEEEEEecCCC-C---CHHHHHHHHHHHHHHhhhccceEEEEecccccchHHH
Confidence            5899999998664332   2345689999999998532 2   2344567778888888788999999999999999999


Q ss_pred             HHHHHHHhcCCCHHHHHHHHHhcCCCccCCHHHHHHHHHHHhc
Q 006472          219 IVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHE  261 (643)
Q Consensus       219 i~aYLm~~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~  261 (643)
                      ++||||...||++++|++.++++||.+.++.+|++||..|.+.
T Consensus       101 v~aYLm~~~~~~~~~A~~~v~~~Rp~i~pn~~f~~qL~~~e~~  143 (144)
T d1mkpa_         101 TVAYLMQKLNLSMNDAYDIVKMKKSNISPNFNFMGQLLDFERT  143 (144)
T ss_dssp             HHHHHHHHHTCCHHHHHHHHHHHCTTCCCCSTTHHHHHHHHHT
T ss_pred             HHHHHHHHhCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHhh
Confidence            9999999999999999999999999999999999999888654


No 8  
>d1d5ra2 c.45.1.1 (A:14-187) Phoshphoinositide phosphatase Pten (Pten tumor suppressor), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79  E-value=8e-19  Score=166.94  Aligned_cols=148  Identities=21%  Similarity=0.345  Sum_probs=120.5

Q ss_pred             ccCceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCeeEEEEcCCCCCCCCcchhccCCcEEEEeeccCCCCCCC
Q 006472          100 IGGCIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPD  179 (643)
Q Consensus       100 I~~~flp~k~Pl~~~~~~~i~~~~~~~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~  179 (643)
                      |+.+|++|..|.+.     .....+....+++..++.+..+...|+|++. .+.|+...+   +++++.+|++|+ .+|+
T Consensus        15 It~riiv~~~P~~~-----~e~~~~~~i~~v~~~l~~~~~~~~~v~nl~~-~~~y~~~~~---~~~~~~~~~~d~-~~Ps   84 (174)
T d1d5ra2          15 IYPNIIAMGFPAER-----LEGVYRNNIDDVVRFLDSKHKNHYKIYNLCA-ERHYDTAKF---NCRVAQYPFEDH-NPPQ   84 (174)
T ss_dssp             EETTEEEECCCBSS-----CCTTCCCBHHHHHHHHHHHSSSCEEEEEEES-SCCCCTTSC---SSCEEEEEECTT-SCCC
T ss_pred             EeCCEEEEeCCCCC-----cHHhhcCCHHHHHHHHHhccCCcEEEEeccc-CCCCChHHc---CCeEEEeCCCCC-CCcC
Confidence            67899999998443     1222345678888888888788899999985 345665544   778999999997 6899


Q ss_pred             HHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHHHhcCC-CHHHHHHHHHhcC---CCccCCHHHHHHH
Q 006472          180 NASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRSQSM-SVAQAIKKFAEVR---PPGIYKNEYIEAL  255 (643)
Q Consensus       180 ~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~li~aYLm~~~g~-s~~eAi~~~~~~R---p~~i~~~~~l~~L  255 (643)
                      .+.+..|+..+..++.  .+++++|+|||++|+||||+++|||||...++ ++++|++.|+.+|   ++++..+.|.+.|
T Consensus        85 ~~~i~~~~~~~~~~~~--~~~~~~v~VHC~~G~gRSg~~~~ayL~~~~~~~~~~~al~~~~~~R~~~~~~v~~psQ~ryl  162 (174)
T d1d5ra2          85 LELIKPFCEDLDQWLS--EDDNHVAAIHCKAGKGRTGVMICAYLLHRGKFLKAQEALDFYGEVRTRDKKGVTIPSQRRYV  162 (174)
T ss_dssp             HHHHHHHHHHHHHHHT--TTSCSEEEEECSSSSHHHHHHHHHHHHHHTSCSSHHHHHHHHHHHHCSSSCSSCSHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhc--cCCCCEEEEEeCCCcchhHHHHHHHHHHHcCCCCHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence            9999999999988887  55678999999999999999999999998775 9999999997776   5677889998888


Q ss_pred             HHHH
Q 006472          256 YTFY  259 (643)
Q Consensus       256 ~~~y  259 (643)
                      .-+.
T Consensus       163 ~yf~  166 (174)
T d1d5ra2         163 YYYS  166 (174)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            6443


No 9  
>d1vhra_ c.45.1.1 (A:) VH1-related dual-specificity phosphatase, VHR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79  E-value=9.6e-20  Score=174.03  Aligned_cols=121  Identities=17%  Similarity=0.302  Sum_probs=98.5

Q ss_pred             CCeeEEEEcCCCCCCC----CcchhccCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcc-cCCCeEEEEcCCCCC
Q 006472          139 RKLGLVIDLTNTTRYY----PTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQK-HSKKYILVHCTHGHN  213 (643)
Q Consensus       139 ~~I~~VIdLt~~~~~y----~~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~-~~~~~VlVHC~~G~~  213 (643)
                      .+|++|||++.+....    ....++..||+|+++|+.|... +   .+...+..+.+||.++. +.+++|||||.+|+|
T Consensus        47 ~gI~~Iin~~~~~~~~~~~~~~~~~~~~~i~y~~ipi~D~~~-~---~i~~~~~~~~~fi~~~~~~~~~~VLVHC~~G~s  122 (178)
T d1vhra_          47 LGITHVLNAAEGRSFMHVNTNANFYKDSGITYLGIKANDTQE-F---NLSAYFERAADFIDQALAQKNGRVLVHCREGYS  122 (178)
T ss_dssp             HTCCEEEETTBSSSTTSBCCCHHHHTTTTCEEEECCCCCSTT-C---CGGGGHHHHHHHHHHHHTSTTCCEEEECSSSSS
T ss_pred             cCCEEEEEcCcccccccccccccccccCCcEEEEEecCCCcc-h---hHHHHHHHHHHHhhhhhhcCCceEEEEcCCCCc
Confidence            4799999999655432    2345677899999999998522 2   24445667778887654 345699999999999


Q ss_pred             hhHHHHHHHHHHhcCCCHHHHHHHHHhcCCCccCCHHHHHHHHHHHhccCC
Q 006472          214 RTGYMIVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEKRL  264 (643)
Q Consensus       214 RSG~li~aYLm~~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~~~  264 (643)
                      |||++++||||.+.||++++|+++++++|| +.++.+|+.||..+++.+.+
T Consensus       123 RS~~vv~aYLm~~~~~s~~~A~~~vr~~R~-i~pn~~f~~qL~~~e~~L~~  172 (178)
T d1vhra_         123 RSPTLVIAYLMMRQKMDVKSALSIVRQNRE-IGPNDGFLAQLCQLNDRLAK  172 (178)
T ss_dssp             HHHHHHHHHHHHHSCCCHHHHHHHHHHHSC-CCCCHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHhcCCCHHHHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999998 67999999999999877654


No 10 
>d1ckma1 b.40.4.6 (A:239-327) RNA guanylyltransferase (mRNA capping enzyme) {Chlorella virus PBCV-1 [TaxId: 10506]}
Probab=99.79  E-value=1.4e-19  Score=150.94  Aligned_cols=86  Identities=28%  Similarity=0.463  Sum_probs=71.5

Q ss_pred             CceEEEEEEEecCCceeEEEEeCCeeeeecCceeEecCCCCCCCCceEEEEEEeCCCCeeEEEEEecCCCCCChHHHHHH
Q 006472          517 MNSVDFLFEVTDDDRQLLYVFERGKKKLMEGSSVEFTDREPSFYSGKIIECTWDPDVQLWKCMRIRTDKSTPNDINTYRK  596 (643)
Q Consensus       517 ~nTvDF~l~~~~~~~~~L~~~~~g~~~~~~~~~~~f~~~~~~~~dg~IvEc~~d~~~~~W~~~R~R~DK~~pN~~~tv~~  596 (643)
                      .|||||+++- .+++..||+.+.|+..++..       ......+|+||||.|+  .++|+++|+|+||..||+++|+.+
T Consensus         2 hnTiDF~~~~-~~~t~~ly~~~~~~~v~~~~-------~~~~~~~g~IvEc~y~--~~~W~~~R~R~DK~~pN~~~T~~~   71 (89)
T d1ckma1           2 HHTIDFIIMS-EDGTIGIFDPNLRKNVPVGK-------LDGYYNKGSIVECGFA--DGTWKYIQGRSDKNQANDRLTYEK   71 (89)
T ss_dssp             CCCEEEEECS-TTCCEEEEETTTTEEEECCC-------CSSCCCTTCEEEEEEE--TTEEEEEEECTTCSSCCBHHHHHH
T ss_pred             CccEEEEEEc-CCCcEEEEchhccccCCcch-------hcceEcCCCEEEEEEc--CCcceEEEEcCCCCCCccHhHHHH
Confidence            6899998854 45577899887776654332       2223479999999998  478999999999999999999999


Q ss_pred             HHHhcccCCCHHHHHH
Q 006472          597 VMRSIRDNITEEVLLN  612 (643)
Q Consensus       597 v~~SI~~~It~e~Ll~  612 (643)
                      ||+||.++||.|+|++
T Consensus        72 vl~sI~e~It~eel~~   87 (89)
T d1ckma1          72 TLLNIEENITIDELLD   87 (89)
T ss_dssp             HHHHHHHCCCHHHHTT
T ss_pred             HHHHHHcCCCHHHHHh
Confidence            9999999999999975


No 11 
>d1p16a1 b.40.4.6 (A:246-390) mRNA capping enzyme alpha subunit {Yeast (Candida albicans) [TaxId: 5476]}
Probab=99.78  E-value=1.7e-19  Score=165.79  Aligned_cols=100  Identities=26%  Similarity=0.425  Sum_probs=76.3

Q ss_pred             CCceEEEEEEEecC-----------C------------ceeEEEEeCCeee-eecCceeEecC-------CCCCCCCceE
Q 006472          516 RMNSVDFLFEVTDD-----------D------------RQLLYVFERGKKK-LMEGSSVEFTD-------REPSFYSGKI  564 (643)
Q Consensus       516 ~~nTvDF~l~~~~~-----------~------------~~~L~~~~~g~~~-~~~~~~~~f~~-------~~~~~~dg~I  564 (643)
                      +.|||||+|++..+           +            ...||++.+|... .++  .+.+.+       .....+||+|
T Consensus         1 EeNTIDF~lk~~~~~~~~~~~~~~~~~~~~~~y~~~p~~~~L~V~~~~~~~~~~~--~~~~~~e~~~~lk~~~~~~d~~I   78 (145)
T d1p16a1           1 EENTVDFQLEFVFNEVQDPDLDERDPTSTYLDYDAKPNLIKLRVWQGSNVHTDFA--KLDLSDDDWERLKALEQPLQGRI   78 (145)
T ss_dssp             GGCCEEEEEEEECEEEECTTSCTTSTTCEEEECSSCCSEEEEEEECSTTCEEEEE--EECCCHHHHHHHHHSSSCCTTCE
T ss_pred             CCCceeEEEEEecccccCCccccCCCccccCCCCCCCceEEEEEEeCCCcccccc--eeeeccchhHHHhhcCCcCCCcE
Confidence            47999999987510           0            1357887766432 222  122221       2345689999


Q ss_pred             EEEEEeCC-CCeeEEEEEecCCCCCChHHHHHHHHHhcccCCCHHHHHHHHHHH
Q 006472          565 IECTWDPD-VQLWKCMRIRTDKSTPNDINTYRKVMRSIRDNITEEVLLNEIQEI  617 (643)
Q Consensus       565 vEc~~d~~-~~~W~~~R~R~DK~~pN~~~tv~~v~~SI~~~It~e~Ll~~i~~i  617 (643)
                      |||.||.. .++|+++|+|+||++||+++||.+||+||.+|||+++|+..++.|
T Consensus        79 vEc~~d~~~~~~W~~~r~R~DK~~pN~~~t~~~v~~sI~~~it~~~l~~~~~~i  132 (145)
T d1p16a1          79 AECRQSTTKKGYWEMLRFRNDKSNGNHISVVEKILVSIKDGVKEKEVIEWCPKI  132 (145)
T ss_dssp             EEEEECSSSTTEEEEEEECTTCSSCCBHHHHHHHHHHHHHSCCHHHHHHHHHHH
T ss_pred             EEEEecCCCCceEEEEEEcCCCCCccHHHHHHHHHHHHhCCCCHHHHHHHhHHH
Confidence            99999864 579999999999999999999999999999999999999888764


No 12 
>d1fpza_ c.45.1.1 (A:) Kinase associated phosphatase (kap) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77  E-value=3.7e-19  Score=169.67  Aligned_cols=126  Identities=18%  Similarity=0.186  Sum_probs=102.7

Q ss_pred             HHHHHHcCCCeeEEEEcCCCCC------CCCcchhccCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeE
Q 006472          131 IHQLRVLGRKLGLVIDLTNTTR------YYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYI  204 (643)
Q Consensus       131 ~~~~~~~~~~I~~VIdLt~~~~------~y~~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~V  204 (643)
                      ++.+++  .+|+.|++|+...+      .+..+.++..||+|+++|+.|+ .+|+.+.+.++++.+.+.+.    .+++|
T Consensus        40 l~~L~~--~gi~~Vv~L~~~~E~~~~~~~~~~~~~~~~gi~~~~~p~~D~-~~p~~~~~~~~~~~i~~~l~----~~~~V  112 (176)
T d1fpza_          40 TEELKS--CGIQDIFVFCTRGELSKYRVPNLLDLYQQCGIITHHHPIADG-GTPDIASCCEIMEELTTCLK----NYRKT  112 (176)
T ss_dssp             HHHHHH--HTCCEEEECCCHHHHHHTTCTTHHHHHHHTTCEEEECCCCTT-CCCCHHHHHHHHHHHHHHHH----TTCCE
T ss_pred             HHHHHh--CCCCEEEEeCChhhhhhcCCCcHHHHHHHcCCEEEeCCccCC-CchhhHHHHHHHHHHHHHHH----cCCeE
Confidence            444554  46999999986431      2234567789999999999997 68998888887766666654    67889


Q ss_pred             EEEcCCCCChhHHHHHHHHHHh-cCCCHHHHHHHHHhcC-CCccCCHHHHHHHHHHHhccC
Q 006472          205 LVHCTHGHNRTGYMIVHFLMRS-QSMSVAQAIKKFAEVR-PPGIYKNEYIEALYTFYHEKR  263 (643)
Q Consensus       205 lVHC~~G~~RSG~li~aYLm~~-~g~s~~eAi~~~~~~R-p~~i~~~~~l~~L~~~y~~~~  263 (643)
                      +|||++|+||||+++|||||+. .++++++|++.+++.| |.++.++.|.+.|++|...+.
T Consensus       113 ~VHC~~G~gRtg~v~~~~Li~~~~~~~~~~Ai~~vr~~R~~~~i~t~~Q~~~l~~f~~~l~  173 (176)
T d1fpza_         113 LIHSYGGLGRSCLVAACLLLYLSDTISPEQAIDSLRDLRGSGAIQTIKQYNYLHEFRDKLA  173 (176)
T ss_dssp             EEECSSSSSHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHCTTSSCSHHHHHHHTTHHHHHH
T ss_pred             EEEecCCCCchHHHHHHHHHHHhcCCCHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHH
Confidence            9999999999999999999985 5899999999999998 567889999999988877643


No 13 
>d1m3ga_ c.45.1.1 (A:) Mapk phosphatase {Human (Homo sapiens), pac-1 [TaxId: 9606]}
Probab=99.76  E-value=3.6e-20  Score=171.16  Aligned_cols=116  Identities=16%  Similarity=0.226  Sum_probs=97.3

Q ss_pred             CCeeEEEEcCCCCCCCCcchhccCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHH
Q 006472          139 RKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYM  218 (643)
Q Consensus       139 ~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~l  218 (643)
                      .+|++|||++.+.+.+     ...+++|+++|+.|....    .+.+++..+.+||+++..++++|+|||++|+|||+++
T Consensus        28 ~gI~~Iin~~~~~~~~-----~~~~~~y~~i~i~D~~~~----~i~~~~~~~~~~i~~~~~~~~~VlVHC~~G~sRS~~v   98 (145)
T d1m3ga_          28 CGITAVLNVSASCPNH-----FEGLFRYKSIPVEDNQMV----EISAWFQEAIGFIDWVKNSGGRVLVHSQAGISRSATI   98 (145)
T ss_dssp             HTCSEEEECSSSSSEE-----ECSSSEEEECCCCCSTTC----CCTTSHHHHHHHHHHHHHTTCCEEECCSSSSSHHHHH
T ss_pred             cCCcEEEEecCCCCcC-----CCCceEEEEEeccCCchh----hHHHHHHHHHHHHHHhhccCceEEEEcccccccHHHH
Confidence            4699999998654322     235789999999985322    2344566777888877778999999999999999999


Q ss_pred             HHHHHHHhcCCCHHHHHHHHHhcCCCccCCHHHHHHHHHHHhccC
Q 006472          219 IVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEKR  263 (643)
Q Consensus       219 i~aYLm~~~g~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~y~~~~  263 (643)
                      ++||||...||++++|+++++++||.+.++.+|+.||.+|...+.
T Consensus        99 ~~aYLm~~~~~~~~~A~~~v~~~Rp~v~pn~~f~~qL~~~e~~l~  143 (145)
T d1m3ga_          99 CLAYLMQSRRVRLDEAFDFVKQRRGVISPNFSFMGQLLQFETQVL  143 (145)
T ss_dssp             HHHHHHHTTCCHHHHHHHHHSCSCCCCSSCSSCCCCSHHHHHHHT
T ss_pred             HHHHHHHHhCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHhc
Confidence            999999999999999999999999999999999999998877653


No 14 
>d1a0ia2 d.142.2.1 (A:2-240) ATP-dependent DNA ligase, N-terminal domain {Bacteriophage T7 [TaxId: 10760]}
Probab=99.70  E-value=7.3e-18  Score=167.46  Aligned_cols=179  Identities=16%  Similarity=0.126  Sum_probs=116.3

Q ss_pred             ccccchhhhhh-hcc-cceeeeecCceeEEEEEEECCEE-EEEeCCCccc-c---ccCCCCCcCC-cccccccCCCCeEe
Q 006472          316 PVSLNSDNLQL-LRQ-RYYYATWKADGTRYMMLITIDGC-YLIDRCFNFR-R---VQMRFPCRNS-NEGLGEKTHHFTLL  387 (643)
Q Consensus       316 PVslsr~~l~~-l~~-~~Y~V~eK~DG~R~ll~i~~~~v-yLidR~~~~~-~---v~~~FP~~~~-~~~~~~~~~~~tlL  387 (643)
                      ||+++...++. +.. ..+++++|+||+|+++++.++++ .+++|++.-+ .   ++..+|.... .........+++||
T Consensus        10 ~~~~~e~~~~~~~~~~~~~~~E~K~DG~R~~~~~~~~~~~~~~SR~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~vL   89 (239)
T d1a0ia2          10 AVSFVESAIKKALDNAGYLIAEIKYDGVRGNICVDNTANSYWLSRVSKTIPALEHLNGFDVRWKRLLNDDRCFYKDGFML   89 (239)
T ss_dssp             EEECCHHHHHHHHHHHSSEEEEECCCSEEEEEEEETTSEEEEECTTSCBCGGGGGGCEECHHHHHHHHSTTCCCTTEEEE
T ss_pred             CcCccHhHHHHhhccCCCEEEEEeeceEEEEEEEECCeEEEEEecCCCcccchhhhhhhhhhHHHHHHHHhhcCCcceEE
Confidence            88888887754 333 34677889999999999998765 4568987622 1   1111111000 00010112367999


Q ss_pred             eEEEEEecCCCC-------------------------------------CCcceEEEEeEeeecCC------eeccCCCH
Q 006472          388 DGEMIIDKLPDS-------------------------------------RRQERRYLIYDMMAINQ------ASVIERPF  424 (643)
Q Consensus       388 DGElV~d~~~~~-------------------------------------~~~~~~yliFDiL~~~G------~~l~~~pf  424 (643)
                      |||||....+..                                     ....+.|++||++.+++      ..+...++
T Consensus        90 DGEl~~~~~~f~~~~~~v~~~~~~~~~~~~~f~~l~~r~~~~~~~~~~~~~~~l~~~vfD~l~l~~~~~~~~~~~~~~~~  169 (239)
T d1a0ia2          90 DGELMVKGVDFNTGSGLLRTKWTDTKNQEFHEELFVEPIRKKDKVPFKLHTGHLHIKLYAILPLHIVESGEDCDVMTLLM  169 (239)
T ss_dssp             EEEEEESSSCTTTHHHHHHCCSCCSSBSSCC--------CCCSCCCCCBCTTTEEEEEEEEEEHHHHHHCCCEEEEHHHH
T ss_pred             eeeEeeccCCcccchhhhhhcccccccccCCHHHHHhhhccCccchhhhhcccceEEEEEEeeccccccccchhhccccH
Confidence            999998421100                                     01357899999999864      45677889


Q ss_pred             HHHHHHHHHHhcCccccccccccccCCCCccCCCCCcEEEecceeechhHHHHHHHhcccccCCCceEEEEeCCCCCccC
Q 006472          425 YERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLEPFRVRRKDFWLLSTVNKLLKEFIPKLSHDADGLVFQGWDDPYVPR  504 (643)
Q Consensus       425 ~eR~~~L~~~v~~p~~~~~~~~~~~~~p~~~~~~~pf~I~~K~~~~~~~~~~ll~~~~~~l~h~~DGLIf~p~~spY~~G  504 (643)
                      .+|+..|...+....                   ....+...+.+.+++.+++.+-+...+..+.||||++..+++|.+|
T Consensus       170 ~~r~~~l~~~~~~~~-------------------~~~~~~~~~~~~~~~~~el~~~~~~~~~~g~EGlmiK~~~s~Y~~G  230 (239)
T d1a0ia2         170 QEHVKNMLPLLQEYF-------------------PEIEWQAAESYEVYDMVELQQLYEQKRAEGHEGLIVKDPMCIYKRG  230 (239)
T ss_dssp             HHHHHHHHHHHHHHC-------------------TTSEEEECCEEEESSHHHHHHHHHHHHTTTCCCEEEECTTCEECSE
T ss_pred             HHHHHHHHHHHhhcC-------------------CCccEEEeeeEecCCHHHHHHHHHHHHHCCCcEEEEeCCCCccCCC
Confidence            999988877553210                   0112455555555554544443445678899999999999999999


Q ss_pred             CCCCeEEEe
Q 006472          505 THEGLLKWK  513 (643)
Q Consensus       505 ~~~~llKWK  513 (643)
                      +...|+|||
T Consensus       231 R~~~w~K~K  239 (239)
T d1a0ia2         231 KKSGWWKMK  239 (239)
T ss_dssp             EEEEEEEES
T ss_pred             CCCCcEEeC
Confidence            988899998


No 15 
>d1fvia2 d.142.2.1 (A:2-189) ATP-dependent DNA ligase, N-terminal domain {Chlorella virus PBCV-1 [TaxId: 10506]}
Probab=99.51  E-value=1.1e-14  Score=139.31  Aligned_cols=153  Identities=17%  Similarity=0.113  Sum_probs=97.1

Q ss_pred             cceeeeecCceeEEEEEEECCEEEEEeCCCccccccCCCCCcCCcccccccCCCCeEeeEEEEEecCC------------
Q 006472          330 RYYYATWKADGTRYMMLITIDGCYLIDRCFNFRRVQMRFPCRNSNEGLGEKTHHFTLLDGEMIIDKLP------------  397 (643)
Q Consensus       330 ~~Y~V~eK~DG~R~ll~i~~~~vyLidR~~~~~~v~~~FP~~~~~~~~~~~~~~~tlLDGElV~d~~~------------  397 (643)
                      .++++++|+||+|++..     +-+++|+++.+  +-.||.....      .....+|||||+....+            
T Consensus        19 ~p~~~e~K~DG~R~~~~-----~~l~SR~g~~~--~~~~~~~~~~------~~~~~~lDGEl~~~~~~~~~~~~~~~~~~   85 (188)
T d1fvia2          19 FPCLATPKIAGIRSVKQ-----TQMLSRTFKPI--RNSVMNRLLT------ELLPEGSDGEISIEGATFQDTTSAVMTGH   85 (188)
T ss_dssp             SSEEEEECCCSEEEEES-----SSEECTTSCBC--SCHHHHHHHH------HHSCTTEEEEEECTTSCHHHHHHHHHSCC
T ss_pred             CcEEEEeccccEeEEeE-----EEEEecCCCcc--CCcChHHHHh------hCccccccceeeccCCchhhhHHHHhhcc
Confidence            36899999999999742     23889998732  3334422111      12456799999985432            


Q ss_pred             CCCCcceEEEEeEeeecCCeeccCCCHHHHHHHHHHHhcCccccccccccccCCCCccCCCCCcEEEecceeechhHHHH
Q 006472          398 DSRRQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLEPFRVRRKDFWLLSTVNKL  477 (643)
Q Consensus       398 ~~~~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~v~~p~~~~~~~~~~~~~p~~~~~~~pf~I~~K~~~~~~~~~~l  477 (643)
                      ......+.|.+||++..++    ..||.+|+..|++.+..-.. ..             ......+.....+...+.+++
T Consensus        86 ~~~~~~~~~~vfD~~~~~~----~~~~~~r~~~l~~~l~~~~~-~~-------------~~~~~~~~~~~~~~~~~~~~~  147 (188)
T d1fvia2          86 KMYNAKFSYYWFDYVTDDP----LKKYIDRVEDMKNYITVHPH-IL-------------EHAQVKIIPLIPVEINNITEL  147 (188)
T ss_dssp             ----CCEEEEEEEECSSCT----TSCHHHHHHHHHHHHHHCGG-GG-------------GCSSEEEEECCCEEECSHHHH
T ss_pred             cccccccEEEEEEEecCcc----cccHHHHHHHHHHHHHhccc-cc-------------ccCceEEEeeeeEecCCHHHH
Confidence            0111357899999998664    78999999999986532111 00             011112222233344444444


Q ss_pred             HHHhcccccCCCceEEEEeCCCCCccCCCC----CeEEEe
Q 006472          478 LKEFIPKLSHDADGLVFQGWDDPYVPRTHE----GLLKWK  513 (643)
Q Consensus       478 l~~~~~~l~h~~DGLIf~p~~spY~~G~~~----~llKWK  513 (643)
                      .+.+...+..+.||||++..+++|.+|++.    .|+|+|
T Consensus       148 ~~~~~~~~~~G~EGlmiK~~ds~Y~~gr~s~r~~~~lK~K  187 (188)
T d1fvia2         148 LQYERDVLSKGFEGVMIRKPDGKYKFGRSTLKEGILLKMK  187 (188)
T ss_dssp             HHHHHHHHHTTCCSEEEECTTCCCCSSBCCTTTTSSEEEC
T ss_pred             HHHHHHHHHCCCcEEEEECCCCccCCCCcCCCCCceEEEe
Confidence            433334677899999999999999999753    599998


No 16 
>d1xria_ c.45.1.1 (A:) Putative phosphatase At1g05000 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=99.35  E-value=3.9e-13  Score=124.00  Aligned_cols=111  Identities=17%  Similarity=0.225  Sum_probs=78.7

Q ss_pred             CHHHHHHHHHHcCCCeeEEEEcCCCCCCC-CcchhccCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeE
Q 006472          126 SFKQVIHQLRVLGRKLGLVIDLTNTTRYY-PTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYI  204 (643)
Q Consensus       126 ~~~~l~~~~~~~~~~I~~VIdLt~~~~~y-~~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~V  204 (643)
                      ++.++ +.++.  .+|++||||+.+...- .+..+...||+|+++|+.+. ..|......+.+..+.+.+.  ...+++|
T Consensus        22 t~~~~-~~L~~--lgIktIidLr~~~e~~~~~~~~~~~gi~~~~ip~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~pv   95 (151)
T d1xria_          22 DSANF-SFLQT--LGLRSIIYLCPEPYPESNLQFLKSNGIRLFQFGIEGN-KEPFVNIPDHKIRMALKVLL--DEKNHPV   95 (151)
T ss_dssp             CHHHH-HHHHH--HTCSEEEECCSSCCCHHHHHHHHHHTCEEEECCCCCC-CGGGCCCCHHHHHHHHHHHH--CGGGCSE
T ss_pred             CHHHH-HHHHH--CCCCEEEECCCcchhhcccchhhhcCceEeecCcccc-ccccccccHHHHHHHHHHHh--cCCCCCE
Confidence            45554 34444  4699999998554321 33456678999999999875 33332222333334444444  3457899


Q ss_pred             EEEcCCCCChhHHHHHHHHHHhcCCCHHHHHHHHHhcCC
Q 006472          205 LVHCTHGHNRTGYMIVHFLMRSQSMSVAQAIKKFAEVRP  243 (643)
Q Consensus       205 lVHC~~G~~RSG~li~aYLm~~~g~s~~eAi~~~~~~Rp  243 (643)
                      +|||++|++|||+++|+||+. .||+.++|++.+.....
T Consensus        96 lvHC~~GkdRTG~v~a~~l~~-~g~~~~~i~~dy~~~~~  133 (151)
T d1xria_          96 LIHCKRGKHRTGCLVGCLRKL-QKWCLTSIFDEYQRFAA  133 (151)
T ss_dssp             EEECSSSSSHHHHHHHHHHHH-TTBCHHHHHHHHHHHHG
T ss_pred             EEEcCCCchHHHHHHHHHHHH-cCCCHHHHHHHHHHhcc
Confidence            999999999999999999975 89999999998887653


No 17 
>d2pt0a1 c.45.1.4 (A:34-346) Myo-inositol hexaphosphate phosphohydrolase (phytase) PhyA {Selenomonas ruminantium [TaxId: 971]}
Probab=98.87  E-value=3e-09  Score=108.49  Aligned_cols=80  Identities=19%  Similarity=0.332  Sum_probs=65.1

Q ss_pred             hhccCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHHHh-cCCCHHHHHH
Q 006472          158 DLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRS-QSMSVAQAIK  236 (643)
Q Consensus       158 ~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~li~aYLm~~-~g~s~~eAi~  236 (643)
                      .++..|+.|+++|+.|+ .+|+.+++..|++    ++.+ ...++.|+|||++|+||||+++++|+|.. .+++++||+.
T Consensus       175 ~~e~~g~~Y~ripi~D~-~~P~~~~id~~i~----~i~~-~~~~~~ivvhc~~g~~rt~~~~~~~~~~~~~~~~~~d~i~  248 (313)
T d2pt0a1         175 VAEAAGMRYFRIAATDH-VWPTPENIDRFLA----FYRT-LPQDAWLHFHCEAGVGRTTAFMVMTDMLKNPSVSLKDILY  248 (313)
T ss_dssp             HHHHTTCEEEEEEECTT-SCCCHHHHHHHHH----HHHT-CCTTCEEEEECSSSSHHHHHHHHHHHHHHCTTSCHHHHHH
T ss_pred             HHHhhCceEEEecCCCC-CCCCHHHHHHHHH----HHHh-CCCCCCEEEECCCCCcHHHHHHHHHHHHHccCCCHHHHHH
Confidence            34678999999999998 6899998888875    4443 34678999999999999999999998865 4679999998


Q ss_pred             HHHhcCC
Q 006472          237 KFAEVRP  243 (643)
Q Consensus       237 ~~~~~Rp  243 (643)
                      .-...++
T Consensus       249 rq~~l~~  255 (313)
T d2pt0a1         249 RQHEIGG  255 (313)
T ss_dssp             HHHHTTS
T ss_pred             HHHHhcc
Confidence            6555544


No 18 
>d1g4us2 c.45.1.2 (S:297-539) SptP tyrosine phosphatase, catalytic domain {Salmonella typhimurium [TaxId: 90371]}
Probab=98.62  E-value=7.2e-08  Score=94.93  Aligned_cols=89  Identities=16%  Similarity=0.271  Sum_probs=66.1

Q ss_pred             ccCCCCCCCHHHHHHHHHHHHHHHHhc-----ccCCCeEEEEcCCCCChhHHHHHHHHHHhcC-CCHHHHHHHHHhcCCC
Q 006472          171 CKGRDAVPDNASVNNFVYEVTQFLSRQ-----KHSKKYILVHCTHGHNRTGYMIVHFLMRSQS-MSVAQAIKKFAEVRPP  244 (643)
Q Consensus       171 ~~d~~~~P~~~~i~~f~~~v~~fi~~~-----~~~~~~VlVHC~~G~~RSG~li~aYLm~~~g-~s~~eAi~~~~~~Rp~  244 (643)
                      .+|++.+++.+.+..++..+...-...     ....++|+|||.+|+||||+++|+..+...+ .++.+++..+|+.|++
T Consensus       143 Wpd~~vP~~~~~l~~li~~v~~~~~~~~~~~~~~~~~PivVHCsaGvGRTGtf~a~~~l~~~~~vdv~~iv~~lR~qR~~  222 (243)
T d1g4us2         143 WPDHQPLPSTDQLEYLADRVKNSNQNGAPGRSSSDKHLPMIHCLGGVGRTGTMAAALVLKDNPHSNLEQVRADFRDSRNN  222 (243)
T ss_dssp             CCTTSCCSCHHHHHHHHHHHHC-------------CCCEEEECSSSSSHHHHHHHHHHHHHCTTCCHHHHHHHHHTTSCT
T ss_pred             cCCCCCCCCHHHHHHHHHHHHHHHHhhhhcccCCCCCCEEEEECCCCCcchHHHHHHHHHhcCCCCHHHHHHHHHhcCCC
Confidence            456655556777777777665442211     1235689999999999999999998887655 6999999999999987


Q ss_pred             -ccCCHHHHHHHHHHH
Q 006472          245 -GIYKNEYIEALYTFY  259 (643)
Q Consensus       245 -~i~~~~~l~~L~~~y  259 (643)
                       .+.+..|...|+..-
T Consensus       223 ~mVqt~~QY~flY~~v  238 (243)
T d1g4us2         223 RMLEDASQFVQLKAMQ  238 (243)
T ss_dssp             TTTCCHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHH
Confidence             588999988887654


No 19 
>d1lara2 c.45.1.2 (A:1628-1876) RPTP Lar {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.51  E-value=6.2e-07  Score=88.27  Aligned_cols=142  Identities=18%  Similarity=0.321  Sum_probs=94.6

Q ss_pred             CceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCeeEEEEcCCCC--------CCCCcc---hhcc---------
Q 006472          102 GCIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTT--------RYYPTS---DLKK---------  161 (643)
Q Consensus       102 ~~flp~k~Pl~~~~~~~i~~~~~~~~~~l~~~~~~~~~~I~~VIdLt~~~--------~~y~~~---~~~~---------  161 (643)
                      ..||....|+..+....        +.++.+      .++.+||-|+...        .|+..+   .+..         
T Consensus        54 ~~fI~tQ~P~~~T~~dF--------W~mV~~------~~v~~IVmL~~~~e~~~~~~~~y~p~~~~~~~~~~~v~~~~~~  119 (249)
T d1lara2          54 KAYIATQGPLAESTEDF--------WRMLWE------HNSTIIVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEY  119 (249)
T ss_dssp             TCEEEECCCCGGGHHHH--------HHHHHH------TTCCEEEECSCSEETTEESSCCCSCSSSCEEETTEEEEEEEEE
T ss_pred             CeEEEECCCCccchhhh--------eeeEEe------ccCCeeEeccccccCCeecccccCccCCCceeeeEEEEEEEEE
Confidence            46899999988766554        344543      6789999987431        122111   1110         


Q ss_pred             --------------------CCcEEEEee-ccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHH
Q 006472          162 --------------------EGIKHVKIQ-CKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIV  220 (643)
Q Consensus       162 --------------------~gI~y~~ip-~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~li~  220 (643)
                                          .-|.++++. .++++.+++...+.+|+..+.+.... ....++|+|||.+|.||||++++
T Consensus       120 ~~~~~~~~~l~~~~~~~~~~~~v~h~~y~~Wpd~~~P~~~~~~~~li~~v~~~~~~-~~~~~pivVhc~~G~gRsg~f~~  198 (249)
T d1lara2         120 NMPQYILREFKVTDARDGQSRTIRQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQ-FGQDGPITVHCSAGVGRTGVFIT  198 (249)
T ss_dssp             ECSSEEEEEEEEEETTTTEEEEEEEEEECCSCSSSCCSSCHHHHHHHHHHHHHHHH-TTCCSCEEEESSSSSSHHHHHHH
T ss_pred             ecCCeEEEEEEEEEcCCCceEEEEEEeecCCCcCCCCCCHHHHHHHHHHHHHhhhh-cCCCCcEEEECCCCCeeehHHHH
Confidence                                112233332 34444444567788888877665432 34568999999999999999997


Q ss_pred             HHHHH----hcC-CCHHHHHHHHHhcCCCccCCHHHHHHHHHH
Q 006472          221 HFLMR----SQS-MSVAQAIKKFAEVRPPGIYKNEYIEALYTF  258 (643)
Q Consensus       221 aYLm~----~~g-~s~~eAi~~~~~~Rp~~i~~~~~l~~L~~~  258 (643)
                      +..+-    ..+ .++.+++..+|+.|+..+.+..|...++..
T Consensus       199 ~~~~~~~l~~~~~vdv~~~v~~lR~qR~~~v~~~~Qy~f~y~~  241 (249)
T d1lara2         199 LSIVLERMRYEGVVDMFQTVKTLRTQRPAMVQTEDQYQLCYRA  241 (249)
T ss_dssp             HHHHHHHHHHHSEECHHHHHHHHTTTSTTSSCSHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCCCHHHHHHHHHhhcccccCCHHHHHHHHHH
Confidence            66332    223 489999999999999999999988877654


No 20 
>d1fpra_ c.45.1.2 (A:) Tyrosine phosphatase {Human (Homo sapiens), shp-1 [TaxId: 9606]}
Probab=98.50  E-value=2.9e-07  Score=92.51  Aligned_cols=85  Identities=18%  Similarity=0.275  Sum_probs=63.1

Q ss_pred             cCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHH----HhcC----CCHHHHHHHHHhcCC
Q 006472          172 KGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLM----RSQS----MSVAQAIKKFAEVRP  243 (643)
Q Consensus       172 ~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~li~aYLm----~~~g----~s~~eAi~~~~~~Rp  243 (643)
                      ++++.+.+...+..|+..+...-. .....++|+|||.+|.||||++||+..+    ...+    .++-+++..+|+.|+
T Consensus       176 pd~~~P~~~~~~l~l~~~v~~~~~-~~~~~~PivVHCs~G~gRtG~fial~~~~~~l~~~~~~~~vdv~~~v~~lR~qR~  254 (284)
T d1fpra_         176 PDHGVPSEPGGVLSFLDQINQRQE-SLPHAGPIIVHSSAGIGRTGTIIVIDMLMENISTKGLDCDIDIQKTIQMVRAQRS  254 (284)
T ss_dssp             CTTSCCSCSHHHHHHHHHHHHHHT-TSTTCCCEEEESSBSSHHHHHHHHHHHHHHHHHHHCTTSCCCHHHHHHHHHTTST
T ss_pred             CccCCCCCHHHHHHHHHHHHHHHh-hcCCCCCEEEEeCCCCccchHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHhhCc
Confidence            444434455777778777765443 2234579999999999999999986543    2333    689999999999999


Q ss_pred             CccCCHHHHHHHHH
Q 006472          244 PGIYKNEYIEALYT  257 (643)
Q Consensus       244 ~~i~~~~~l~~L~~  257 (643)
                      ..+.+..|...+++
T Consensus       255 ~~V~t~~QY~f~y~  268 (284)
T d1fpra_         255 GMVQTEAQYKFIYV  268 (284)
T ss_dssp             TSSCSSHHHHHHHH
T ss_pred             cccCCHHHHHHHHH
Confidence            99999888777764


No 21 
>d1lara1 c.45.1.2 (A:1307-1623) RPTP Lar {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.49  E-value=7.6e-07  Score=90.90  Aligned_cols=84  Identities=15%  Similarity=0.180  Sum_probs=62.6

Q ss_pred             cCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHHH-----hcCCCHHHHHHHHHhcCCCcc
Q 006472          172 KGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMR-----SQSMSVAQAIKKFAEVRPPGI  246 (643)
Q Consensus       172 ~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~li~aYLm~-----~~g~s~~eAi~~~~~~Rp~~i  246 (643)
                      +|++.+++...+.+|+..+...   .....++|+|||.+|.||||+++|...+-     ....++.+++..+|+.|+..+
T Consensus       183 pd~~~P~~~~~~l~~i~~v~~~---~~~~~~PivVHCs~GvGRtG~f~al~~~~~~l~~~~~vdv~~~v~~lR~qR~~~V  259 (317)
T d1lara1         183 PDHGVPEYPTPILAFLRRVKAC---NPLDAGPMVVHCSAGVGRTGCFIVIDAMLERMKHEKTVDIYGHVTCMRSQRNYMV  259 (317)
T ss_dssp             CSSSCCSCSHHHHHHHHHHHHH---SCTTCCCEEEESSSSSSHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHTTSTTSS
T ss_pred             ccCCCCCCHHHHHHHHHHHHHh---hcCCCCcEEEEecccccceeeeehhHhHHHHHhcCCCCCHHHHHHHHHhhccccc
Confidence            4454444566777777665432   23456799999999999999999764432     234699999999999999999


Q ss_pred             CCHHHHHHHHHH
Q 006472          247 YKNEYIEALYTF  258 (643)
Q Consensus       247 ~~~~~l~~L~~~  258 (643)
                      .+..|...++..
T Consensus       260 ~t~~QY~fiy~~  271 (317)
T d1lara1         260 QTEDQYVFIHEA  271 (317)
T ss_dssp             CSHHHHHHHHHH
T ss_pred             CCHHHHHHHHHH
Confidence            999988776654


No 22 
>d1p15a_ c.45.1.2 (A:) Protein-tyrosine phosphatase alpha {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.48  E-value=1.8e-07  Score=92.01  Aligned_cols=87  Identities=23%  Similarity=0.253  Sum_probs=63.1

Q ss_pred             ccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHHHh-----cCCCHHHHHHHHHhcCCCc
Q 006472          171 CKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRS-----QSMSVAQAIKKFAEVRPPG  245 (643)
Q Consensus       171 ~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~li~aYLm~~-----~g~s~~eAi~~~~~~Rp~~  245 (643)
                      .+|++.+++...+..|+..+..--  .....++|+|||.+|.||||+++|+..+..     ...++.+++..+|+.|++.
T Consensus       148 Wpd~~~P~~~~~~l~~~~~v~~~~--~~~~~~PivVHCs~G~gRsg~f~a~~~~~~~l~~~~~vdv~~~v~~lR~qR~~~  225 (245)
T d1p15a_         148 WPEVGIPSDGKGMINIIAAVQKQQ--QQSGNHPITVHCSAGAGRTGTFCALSTVLERVKAEGILDVFQTVKSLRLQRPHM  225 (245)
T ss_dssp             SCSSSCCSSSCSHHHHHHHHHHHT--TTTTSCCEEEESSSSSHHHHHHHHHHHHHHHHHHHSCCCTTHHHHHHHTTSTTS
T ss_pred             CCccCCCCCHHHHHHHHHHHHhhh--ccCCCCCEEEEcCCCCccccHHHHHHHHHHHHHcCCCcCHHHHHHHHHHhcccc
Confidence            345544344556667776654432  233457999999999999999998755532     2468999999999999999


Q ss_pred             cCCHHHHHHHHHHH
Q 006472          246 IYKNEYIEALYTFY  259 (643)
Q Consensus       246 i~~~~~l~~L~~~y  259 (643)
                      +.+..|...++..-
T Consensus       226 vqt~~QY~f~y~~l  239 (245)
T d1p15a_         226 VQTLEQYEFCYKVV  239 (245)
T ss_dssp             SCSTTTTHHHHHHH
T ss_pred             cCCHHHHHHHHHHH
Confidence            99988877776543


No 23 
>d1jlna_ c.45.1.2 (A:) Tyrosine phosphatase {Mouse (Mus musculus), ptp-sl/br7 [TaxId: 10090]}
Probab=98.46  E-value=6.7e-07  Score=90.51  Aligned_cols=87  Identities=14%  Similarity=0.157  Sum_probs=65.6

Q ss_pred             ccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHHHh-----cCCCHHHHHHHHHhcCCCc
Q 006472          171 CKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRS-----QSMSVAQAIKKFAEVRPPG  245 (643)
Q Consensus       171 ~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~li~aYLm~~-----~g~s~~eAi~~~~~~Rp~~  245 (643)
                      .+|++.+++...+..|+..+.+.-. .....++|+|||.+|.||||++||+..+..     ...++-+++..+|+.|+..
T Consensus       193 Wpd~~vP~~~~~~l~~i~~v~~~~~-~~~~~~PivVHCsaGvGRtG~fial~~~l~~l~~~~~vdv~~~v~~lR~qR~~~  271 (297)
T d1jlna_         193 WPDHKTPDSAQPLLQLMLDVEEDRL-ASEGRGPVVVHCSAGIGRTGCFIATSIGCQQLKEEGVVDALSIVCQLRVDRGGM  271 (297)
T ss_dssp             SCTTSSCSCSHHHHHHHHHHHHHHH-TCTTSCCEEEESSSSSHHHHHHHHHHHHHHHHHHHSEECHHHHHHHHHHHSTTS
T ss_pred             cCCCCCCCChHHHHHHHHHHHHHHh-cccCCCceEEEecccccchhHHHHHHHHHHHHhhcCCCCHHHHHHHHHhhcccc
Confidence            4566545567778888877765432 123457999999999999999998766532     2358899999999999999


Q ss_pred             cCCHHHHHHHHHH
Q 006472          246 IYKNEYIEALYTF  258 (643)
Q Consensus       246 i~~~~~l~~L~~~  258 (643)
                      +.+..|...+++.
T Consensus       272 Vqt~~QY~Fiy~~  284 (297)
T d1jlna_         272 VQTSEQYEFVHHA  284 (297)
T ss_dssp             SCSHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHH
Confidence            9999888766543


No 24 
>d1rpma_ c.45.1.2 (A:) Tyrosine phosphatase {Human (Homo sapiens), mu [TaxId: 9606]}
Probab=98.46  E-value=6.4e-07  Score=89.69  Aligned_cols=84  Identities=19%  Similarity=0.283  Sum_probs=63.1

Q ss_pred             cCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHHHh----cC-CCHHHHHHHHHhcCCCcc
Q 006472          172 KGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRS----QS-MSVAQAIKKFAEVRPPGI  246 (643)
Q Consensus       172 ~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~li~aYLm~~----~g-~s~~eAi~~~~~~Rp~~i  246 (643)
                      +|++.+++...+..|+..+..   ......++|+|||.+|.||||+++|+..+..    .+ .++.+++..+|+.|+..+
T Consensus       184 pd~~~P~~~~~~l~~i~~v~~---~~~~~~~PivVHCs~G~gRsG~f~al~~~~~~l~~~~~vdv~~~v~~lR~qR~~~V  260 (278)
T d1rpma_         184 PDHGVPYHATGLLGFVRQVKS---KSPPSAGPLVVHCSAGAGRTGCFIVIDIMLDMAEREGVVDIYNCVRELRSRRVNMV  260 (278)
T ss_dssp             CSSSCCSCSHHHHHHHHHHHH---HSCTTSCCEEEESSSSSHHHHHHHHHHHHHHHHHHHSEECHHHHHHHHHHHSTTSS
T ss_pred             ccCCCCCCHHHHHHHHHHHHH---HhCCCCCCEEEEeCCCchhhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHhhccccc
Confidence            455434456667777766543   2234467999999999999999997655432    23 589999999999999999


Q ss_pred             CCHHHHHHHHHH
Q 006472          247 YKNEYIEALYTF  258 (643)
Q Consensus       247 ~~~~~l~~L~~~  258 (643)
                      .+..|...++..
T Consensus       261 ~t~~QY~f~y~~  272 (278)
T d1rpma_         261 QTEEQYVFIHDA  272 (278)
T ss_dssp             CSHHHHHHHHHH
T ss_pred             CCHHHHHHHHHH
Confidence            999998888754


No 25 
>d1s68a_ d.142.2.4 (A:) RNA ligase 2, N-terminal domain {Bacteriophage T4 [TaxId: 10665]}
Probab=98.43  E-value=4.5e-07  Score=88.30  Aligned_cols=183  Identities=11%  Similarity=0.074  Sum_probs=99.5

Q ss_pred             hhcccceeeeecCceeEEEEEEECCEEEEEeCCCccccccCCCCCcCCcccc-------cccCCCCeEeeEEEEEecCC-
Q 006472          326 LLRQRYYYATWKADGTRYMMLITIDGCYLIDRCFNFRRVQMRFPCRNSNEGL-------GEKTHHFTLLDGEMIIDKLP-  397 (643)
Q Consensus       326 ~l~~~~Y~V~eK~DG~R~ll~i~~~~vyLidR~~~~~~v~~~FP~~~~~~~~-------~~~~~~~tlLDGElV~d~~~-  397 (643)
                      .+....|+|+||.||+|+.++.+++++.+.+|++.+..-+..|........+       .+......++||||+....+ 
T Consensus        24 ~~~~~~~vveEKlDG~n~~l~~~~~~~~~~SR~~~l~~~~~~~g~~~~~~~l~~~i~~~~~~~~~~~~~~~~i~GE~~g~  103 (233)
T d1s68a_          24 GLTGGEWVAREKIHGTNFSLIIERDKVTCAKRTGPILPAEDFFGYEIILKNYADSIKAVQDIMETSAVVSYQVFGEFAGP  103 (233)
T ss_dssp             TCSCSCEEEEECCCSEEEEEEEESSCEEEEETTEECCTTCCCTTTHHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEEST
T ss_pred             ccCCCeEEEEEeECCccEEEEEECCEEEEEecCCcccCCCccchhhhhhhHHHHHHHHHHhhhhhccCcceEEEeecccC
Confidence            3566799999999999999999999999999997532111111100000000       00112345788988864221 


Q ss_pred             C----CCCcceEEEEeEeeec-CCeeccCCCHHHHHHHHHHHhcCcccc-cccccccc-CCCCccCCCCCcEEEecceee
Q 006472          398 D----SRRQERRYLIYDMMAI-NQASVIERPFYERWKMLEKEVIEPRNY-ERHNIYQS-RNPYYRYDLEPFRVRRKDFWL  470 (643)
Q Consensus       398 ~----~~~~~~~yliFDiL~~-~G~~l~~~pf~eR~~~L~~~v~~p~~~-~~~~~~~~-~~p~~~~~~~pf~I~~K~~~~  470 (643)
                      .    .......|++||+... ++....-+++..+..+++..-+..-.. .+..+.+. .-|.      .+.-....+..
T Consensus       104 ~iq~~~~~~~~~f~~Fdv~~~~~~~~~~fl~~d~~~~~~~~~gl~~vP~l~rg~~~~~~~~~~------~~~~~~~~~~~  177 (233)
T d1s68a_         104 GIQKNVDYCDKDFYVFDIIVTTESGDVTYVDDYMMESFCNTFKFKMAPLLGRGKFEELIKLPN------DLDSVVQDYNF  177 (233)
T ss_dssp             TTSSSCCCCSCEEEEEEEEEEETTCCEEECCHHHHHHHHHHHTCEESCEEEEECHHHHTTSCT------TCBCCHHHHHH
T ss_pred             CccccccccccceEEEEEEEeccCCccceecHHHHHHHHhcCCCCcCCeEEEecHHHhhcccc------ccchhhhhhcc
Confidence            1    1113578999999875 455566788999988887743221100 00000000 0000      00000000000


Q ss_pred             chhHHHH--HHHh-----cccccCCCceEEEEeCCCCCccCCCCCeEEEec
Q 006472          471 LSTVNKL--LKEF-----IPKLSHDADGLVFQGWDDPYVPRTHEGLLKWKY  514 (643)
Q Consensus       471 ~~~~~~l--l~~~-----~~~l~h~~DGLIf~p~~spY~~G~~~~llKWKP  514 (643)
                      ......+  +.+.     .....+..||||++|.+++|.+.+...|+|-|-
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~EGiVlK~~~~~~~~~~~r~~~K~k~  228 (233)
T d1s68a_         178 TVDHAGLVDANKCVWNAEAKGEVFTAEGYVLKPCYPSWLRNGNRVAIKCKN  228 (233)
T ss_dssp             HHHHHCHHHHHHCCCCCCCCCSSCBCCEEEEEESSCCBCTTSCBSCEEEEC
T ss_pred             cccccchhhhhcccchhhcccccCccCEEEEEeCCCCEecCCCceEEEEec
Confidence            0000101  1111     112345679999999999999988889999984


No 26 
>d1wcha_ c.45.1.2 (A:) Tyrosine-protein phosphatase, non-receptor type 13 (PTPL1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.40  E-value=5.1e-07  Score=91.86  Aligned_cols=83  Identities=14%  Similarity=0.242  Sum_probs=63.4

Q ss_pred             ccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHHHh-----cCCCHHHHHHHHHhcCCCc
Q 006472          171 CKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRS-----QSMSVAQAIKKFAEVRPPG  245 (643)
Q Consensus       171 ~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~li~aYLm~~-----~g~s~~eAi~~~~~~Rp~~  245 (643)
                      .+|++.+++...+..|+..+..     ....++|+|||.+|.||||++||+..+-.     ...++.+++..+|+.|+..
T Consensus       207 Wpd~~vP~~~~~~l~~l~~v~~-----~~~~~PivVHCsaGvGRtG~fia~d~~l~~l~~~~~vdv~~~v~~lR~qR~~~  281 (308)
T d1wcha_         207 WPDHDTPSQPDDLLTFISYMRH-----IHRSGPIITHCSAGIGRSGTLICIDVVLGLISQDLDFDISDLVRCMRLQRHGM  281 (308)
T ss_dssp             CCTTSCCSCHHHHHHHHHHHHH-----HCCSSCEEEECSSSSHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTTSTTC
T ss_pred             ccccccCCCchhHHHHHHHHHH-----hccCCcEEEEeccccchhHHHHHHHHHHHHHHccCCCCHHHHHHHHHhhCccc
Confidence            3555544456777777766543     23567999999999999999998766532     2368999999999999999


Q ss_pred             cCCHHHHHHHHHH
Q 006472          246 IYKNEYIEALYTF  258 (643)
Q Consensus       246 i~~~~~l~~L~~~  258 (643)
                      +.+..|...+++.
T Consensus       282 Vqt~~QY~f~y~~  294 (308)
T d1wcha_         282 VQTEDQYIFCYQV  294 (308)
T ss_dssp             SCSHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHH
Confidence            9999888776643


No 27 
>d2shpa1 c.45.1.2 (A:219-525) Tyrosine phosphatase {Human (Homo sapiens), shp-2 [TaxId: 9606]}
Probab=98.37  E-value=7.4e-07  Score=90.61  Aligned_cols=87  Identities=22%  Similarity=0.326  Sum_probs=67.4

Q ss_pred             ccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHH----HHhcC----CCHHHHHHHHHhcC
Q 006472          171 CKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFL----MRSQS----MSVAQAIKKFAEVR  242 (643)
Q Consensus       171 ~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~li~aYL----m~~~g----~s~~eAi~~~~~~R  242 (643)
                      .+|++.+++...+..|+..+...... ....++|+|||.+|.||||++||...    +...+    .++.+++..+|+.|
T Consensus       205 Wpd~~vP~~~~~ll~li~~v~~~~~~-~~~~~PivVHCs~GvgRtGtfia~~~~l~~l~~~~~~~~vdv~~~V~~lR~qR  283 (307)
T d2shpa1         205 WPDHGVPSDPGGVLDFLEEVHHKQES-IMDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKGVDCDIDVPKTIQMVRSQR  283 (307)
T ss_dssp             CCSSSCCSCHHHHHHHHHHHHHHHHH-STTCCCEEEECSSSSHHHHHHHHHHHHHHHHHHHCTTSEECHHHHHHHHHTTS
T ss_pred             CCCCCCCCChHHHHHHHHHHHHHhhc-ccCCCCEEEEeCCCCcHHHHHHHHHHHHHHHHHcCCCCccCHHHHHHHHHhhc
Confidence            45665555778888888888766543 23457999999999999999988643    33334    58999999999999


Q ss_pred             CCccCCHHHHHHHHHH
Q 006472          243 PPGIYKNEYIEALYTF  258 (643)
Q Consensus       243 p~~i~~~~~l~~L~~~  258 (643)
                      +..+.+..|...+++.
T Consensus       284 ~~~Vqt~~QY~fiy~~  299 (307)
T d2shpa1         284 SGMVQTEAQYRSIYMA  299 (307)
T ss_dssp             TTSSCCHHHHHHHHHH
T ss_pred             ccccCCHHHHHHHHHH
Confidence            9999999988777653


No 28 
>d1l8ka_ c.45.1.2 (A:) Tyrosine phosphatase {Human (Homo sapiens), T-cell [TaxId: 9606]}
Probab=98.27  E-value=1.4e-06  Score=86.82  Aligned_cols=86  Identities=17%  Similarity=0.205  Sum_probs=62.9

Q ss_pred             cCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHHHh-----cCCCHHHHHHHHHhcCCCcc
Q 006472          172 KGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRS-----QSMSVAQAIKKFAEVRPPGI  246 (643)
Q Consensus       172 ~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~li~aYLm~~-----~g~s~~eAi~~~~~~Rp~~i  246 (643)
                      +|++.+++...+..|+..+..... .....++|+|||.+|.||||+++|+..+..     ...++.+++..+|+.|+..+
T Consensus       177 pd~~~P~~~~~~~~l~~~v~~~~~-~~~~~~PivVHCs~GvgRtGtf~al~~~~~~l~~~~~vdv~~~v~~lR~qR~~~V  255 (273)
T d1l8ka_         177 PDFGVPESPASFLNFLFKVRESGS-LNPDHGPAVIHCSAGIGRSGTFSLVDTCLVLMEKGDDINIKQVLLNMRKYRMGLI  255 (273)
T ss_dssp             CSSSCCSCSHHHHHHHHHHHHTTT-TSTTSCCEEEEESSSSSHHHHHHHHHHHHHHSSSSCCCCHHHHHHHHTTTBTTCS
T ss_pred             ccCCCCCCHHHHHHHHHHHHHhhc-cCCCCceEEEEecccccceehHHHHHHHHHHHHhCCCcCHHHHHHHHHHhccccc
Confidence            455545456666666655543221 122346999999999999999998765542     23589999999999999999


Q ss_pred             CCHHHHHHHHHH
Q 006472          247 YKNEYIEALYTF  258 (643)
Q Consensus       247 ~~~~~l~~L~~~  258 (643)
                      .+..|...++..
T Consensus       256 qt~~QY~f~y~~  267 (273)
T d1l8ka_         256 QTPDQLRFSYMA  267 (273)
T ss_dssp             CSHHHHHHHHHH
T ss_pred             CCHHHHHHHHHH
Confidence            999998877653


No 29 
>d2f71a1 c.45.1.2 (A:2-298) Tyrosine phosphatase {Human (Homo sapiens), 1B [TaxId: 9606]}
Probab=98.25  E-value=1.5e-06  Score=87.79  Aligned_cols=85  Identities=21%  Similarity=0.294  Sum_probs=61.1

Q ss_pred             cCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHH----HHHhc----CCCHHHHHHHHHhcCC
Q 006472          172 KGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHF----LMRSQ----SMSVAQAIKKFAEVRP  243 (643)
Q Consensus       172 ~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~li~aY----Lm~~~----g~s~~eAi~~~~~~Rp  243 (643)
                      +|++.+.+...+..|+..+..... .....++|+|||.+|.||||+++|..    +|...    .+++.+++..+|+.|+
T Consensus       179 pd~~vP~~~~~~l~l~~~v~~~~~-~~~~~~PivVHCs~G~gRtGtf~ald~~~~~l~~~~~~~~vdV~~~v~~lR~qR~  257 (297)
T d2f71a1         179 PDFGVPESPASFLNFLFKVRESGS-LSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPSSVDIKKVLLEMRKFRM  257 (297)
T ss_dssp             CTTCCCSCHHHHHHHHHHHHHTTT-TCTTSCCEEEECSSSSHHHHHHHHHHHHHHHHHHHTCGGGCCHHHHHHHHTTTST
T ss_pred             ccCCCCCCHHHHHHHHHHHHHhhc-cCCCCceEEEeeccccCceehhHHHHHHHHHHHhhcCCCccCHHHHHHHHHhhcc
Confidence            455444456666666665544322 12234699999999999999999864    34432    2589999999999999


Q ss_pred             CccCCHHHHHHHHH
Q 006472          244 PGIYKNEYIEALYT  257 (643)
Q Consensus       244 ~~i~~~~~l~~L~~  257 (643)
                      ..+.+..|...++.
T Consensus       258 ~~Vqt~~QY~f~y~  271 (297)
T d2f71a1         258 GLIQTADQLRFSYL  271 (297)
T ss_dssp             TCSCSHHHHHHHHH
T ss_pred             cccCCHHHHHHHHH
Confidence            99999998876653


No 30 
>d1lyva_ c.45.1.2 (A:) Protein-tyrosine phosphatase YopH, catalytic domain {Yersinia enterocolitica [TaxId: 630]}
Probab=98.25  E-value=2.2e-06  Score=85.86  Aligned_cols=63  Identities=22%  Similarity=0.302  Sum_probs=51.2

Q ss_pred             CCCeEEEEcCCCCChhHHHHHHHHHH---hcCCCHHHHHHHHHhcCCC-ccCCHHHHHHHHHHHhcc
Q 006472          200 SKKYILVHCTHGHNRTGYMIVHFLMR---SQSMSVAQAIKKFAEVRPP-GIYKNEYIEALYTFYHEK  262 (643)
Q Consensus       200 ~~~~VlVHC~~G~~RSG~li~aYLm~---~~g~s~~eAi~~~~~~Rp~-~i~~~~~l~~L~~~y~~~  262 (643)
                      ..++|+|||.+|.||||+++|+.++.   ....++.+++..+|+.|++ .+.+..|...|++.-...
T Consensus       210 ~~~PivVHCs~GvGRtGtfia~~~~~~~~~~~vdv~~~v~~lR~qR~~~mVqt~~QY~fly~~~~~~  276 (283)
T d1lyva_         210 SKLRPVIHSRAGVGRTAQLIGAMCMNDSRNSQLSVEDMVSQMRVQRNGIMVQKDEQLDVLIKLAEGQ  276 (283)
T ss_dssp             TSSCCEEECSSSSSHHHHHHHHHHHTCGGGTTCCHHHHHHHHHHHTCTTSSCSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCcHHHHHHHHHHHHHhccCCCCHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHh
Confidence            45799999999999999998775543   2246899999999999976 688999999998775543


No 31 
>d1yfoa_ c.45.1.2 (A:) Tyrosine phosphatase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.15  E-value=2.8e-06  Score=85.32  Aligned_cols=83  Identities=18%  Similarity=0.206  Sum_probs=62.7

Q ss_pred             cCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHHHh-----cCCCHHHHHHHHHhcCCCcc
Q 006472          172 KGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRS-----QSMSVAQAIKKFAEVRPPGI  246 (643)
Q Consensus       172 ~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~li~aYLm~~-----~g~s~~eAi~~~~~~Rp~~i  246 (643)
                      +|++.+.+...+..|+..+..   ......++|+|||.+|.||||+++|+..+..     ...++.+++..+|+.|+..+
T Consensus       193 pd~~~P~~~~~~l~l~~~v~~---~~~~~~~PivVHCs~G~gRtG~f~al~~~~~~l~~~~~vdv~~~v~~lR~qR~~~V  269 (288)
T d1yfoa_         193 PDFGVPFTPIGMLKFLKKVKA---CNPQYAGAIVVHCSAGVGRTGTFVVIDAMLDMMHSERKVDVYGFVSRIRAQRCQMV  269 (288)
T ss_dssp             CSSSCCSCSHHHHHHHHHHHH---HSCTTSCCEEEECSSSSHHHHHHHHHHHHHHHHHHSSEECHHHHHHHHTTTSTTSS
T ss_pred             CCCCCCCCHHHHHHHHHHHHH---hccccCCcEEEEeCCCCcccHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhhccccC
Confidence            465444456666777665533   2234567999999999999999988766542     23589999999999999999


Q ss_pred             CCHHHHHHHHH
Q 006472          247 YKNEYIEALYT  257 (643)
Q Consensus       247 ~~~~~l~~L~~  257 (643)
                      .+..|...++.
T Consensus       270 ~t~~QY~f~y~  280 (288)
T d1yfoa_         270 QTDMQYVFIYQ  280 (288)
T ss_dssp             CSHHHHHHHHH
T ss_pred             CCHHHHHHHHH
Confidence            99998887765


No 32 
>d1ywfa1 c.45.1.5 (A:4-275) Phosphotyrosine protein phosphatase PtpB {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=97.94  E-value=6.4e-06  Score=82.01  Aligned_cols=41  Identities=17%  Similarity=0.510  Sum_probs=33.5

Q ss_pred             CCCeEEEEcCCCCChhHHHHHHHHHHhcCCCHHHHHHHHHhc
Q 006472          200 SKKYILVHCTHGHNRTGYMIVHFLMRSQSMSVAQAIKKFAEV  241 (643)
Q Consensus       200 ~~~~VlVHC~~G~~RSG~li~aYLm~~~g~s~~eAi~~~~~~  241 (643)
                      .+++|++||++|+.|||.++|. |+...|.+-++.++-+...
T Consensus       149 ~~~pvL~HCtaGKDRTG~~aal-lL~llGV~~e~I~~DYllS  189 (272)
T d1ywfa1         149 AGRPVLTHCFAGKDRTGFVVAL-VLEAVGLDRDVIVADYLRS  189 (272)
T ss_dssp             TTCCEEEECSSSSSHHHHHHHH-HHHHTTCCHHHHHHHHHGG
T ss_pred             cCCCEEEecCCCCcchHHHHHH-HHHHcCCCHHHHHHHHHhh
Confidence            5789999999999999965555 4456899999998877655


No 33 
>d1ohea1 c.45.1.1 (A:42-198) Proline directed phosphatase CDC14b2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.29  E-value=0.00041  Score=62.43  Aligned_cols=71  Identities=11%  Similarity=0.130  Sum_probs=59.2

Q ss_pred             cCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCCh----hHHHHHHHHHHhcCCCHHHHHHHHHhcCCC
Q 006472          172 KGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNR----TGYMIVHFLMRSQSMSVAQAIKKFAEVRPP  244 (643)
Q Consensus       172 ~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~R----SG~li~aYLm~~~g~s~~eAi~~~~~~Rp~  244 (643)
                      .|+ .+.....+-+|+..+.+-+.+.... +..+|||+..-++    +++|||||+|-.++||+++|++.+.+.-|+
T Consensus        46 ~DF-GPLNL~~lyrfc~~l~~~L~~~~~~-~k~Iv~yts~d~~kraNAa~Lig~Y~Vi~l~~sp~~a~~~l~~~~p~  120 (157)
T d1ohea1          46 ADF-GPLNLAMVYRYCCKINKKLKSITML-RKKIVHFTGSDQRKQANAAFLVGCYMVIYLGRTPEEAYRILIFGETS  120 (157)
T ss_dssp             SCC-CCCCHHHHHHHHHHHHHHHHCGGGT-TSEEEEEECSCHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHTTTTCC
T ss_pred             ccc-CCchHHHHHHHHHHHHHHHcChhhc-CCeEEEECCCCHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHhcCCC
Confidence            466 4889999999999999998855444 4566999877665    899999999999999999999999877554


No 34 
>d1b04a_ d.142.2.2 (A:) Adenylation domain of NAD+-dependent DNA ligase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=92.59  E-value=0.7  Score=45.24  Aligned_cols=161  Identities=16%  Similarity=0.141  Sum_probs=87.6

Q ss_pred             cccceeeeecCceeEEEEEEECCE-EEEEeCCCccc--cccCCCCCcCC-cccccccCCCCeEeeEEEEEecC-------
Q 006472          328 RQRYYYATWKADGTRYMMLITIDG-CYLIDRCFNFR--RVQMRFPCRNS-NEGLGEKTHHFTLLDGEMIIDKL-------  396 (643)
Q Consensus       328 ~~~~Y~V~eK~DG~R~ll~i~~~~-vyLidR~~~~~--~v~~~FP~~~~-~~~~~~~~~~~tlLDGElV~d~~-------  396 (643)
                      ....|+|++|.||+-+.+....+. +.+++|.+-..  .|+..+..... +..+  .......+.||+++.+.       
T Consensus       104 ~~~~~~v~~KlDG~si~l~Y~~G~l~~a~TRGdG~~GeDIT~~~~~i~~iP~~~--~~~~~~~irGE~~~~~~~f~~~~~  181 (312)
T d1b04a_         104 GEAAYVCELAIDGLAVSVRYEDGYFVQGATRGDGTTGEDITENLKTIRSLPLRL--KEPVSLEARGEAFMPKASFLRLNE  181 (312)
T ss_dssp             SSCCEEEEEEESSEEEEEEEETTEEEEEEECTTSSCEEBCHHHHHTCTTSCSBC--SSCCCEEEEEEEECCHHHHHHHHH
T ss_pred             cccceeeeeeeecceeeeeecccceEEEeecCCcchhhhHHHHHhhhcCCCCcc--CCCcccccccceeeecchhhhhhh
Confidence            445899999999999988887664 68999963211  11111100000 0001  11245788999997421       


Q ss_pred             ----------CCC---------C-------CcceEEEEeEeeecCCeeccCCCHHHHHHHHHHHhcCccccccccccccC
Q 006472          397 ----------PDS---------R-------RQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSR  450 (643)
Q Consensus       397 ----------~~~---------~-------~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~v~~p~~~~~~~~~~~~  450 (643)
                                .+.         .       ...+.|++|.+....+  .......+.+..|...-...            
T Consensus       182 ~~~~~~~~~f~NpRN~aAG~l~~k~~~~~~~~~l~~~~y~~~~~~~--~~~~~~~e~l~~L~~~gf~~------------  247 (312)
T d1b04a_         182 ERKARGEELFANPRNAAAGSLRQLDPKVAASRQLDLFVYGLADAEA--LGIASHSEALDYLQALGFKV------------  247 (312)
T ss_dssp             HHHHC--CCCSCHHHHHHHHHHSSCHHHHHHTCCEEEEEEETTTTT--TTCCBHHHHHHHHHHTTCCC------------
T ss_pred             hhhhccccccchhhHHhhcccccccchhhhhhhhhheeeecccccc--ccchhHHHHHHHHHhcCccc------------
Confidence                      000         0       1357788888765443  23445677888887643211            


Q ss_pred             CCCccCCCCCcEEEecceeechhHHHHHHHh---cccccCCCceEEEEeCCCCC------ccCCCCCeEEEecC
Q 006472          451 NPYYRYDLEPFRVRRKDFWLLSTVNKLLKEF---IPKLSHDADGLVFQGWDDPY------VPRTHEGLLKWKYA  515 (643)
Q Consensus       451 ~p~~~~~~~pf~I~~K~~~~~~~~~~ll~~~---~~~l~h~~DGLIf~p~~spY------~~G~~~~llKWKP~  515 (643)
                      .+.        ....+   .+..+.++++.+   ...+.+..||||++-.+..+      +.+....-+=||+|
T Consensus       248 ~~~--------~~~~~---~~~~v~~~~~~~~~~R~~l~Y~iDGIVikvn~~~~~~~lG~ts~~PrwAiA~Kfp  310 (312)
T d1b04a_         248 NPE--------RRRCA---NIDEVIAFVSEWHDKRPQLPYEIDGIVIKVDSFAQQRALGATAKSPRWAIAYKFP  310 (312)
T ss_dssp             CTT--------CEEES---SHHHHHHHHHHHHHHSTTCSSCEEEEEEEECBHHHHHHHCCCSSSCTTEEEEECC
T ss_pred             ccc--------eEEEC---CHHHHHHHHHHHHhhhhcCCCCCCeEEEEEcCHHHHHHcCCcCCCCCceEEeCcC
Confidence            111        01111   123333333333   34678999999998755443      22223455666665


No 35 
>d1ta8a_ d.142.2.2 (A:) Adenylation domain of NAD+-dependent DNA ligase {Enterococcus faecalis [TaxId: 1351]}
Probab=91.78  E-value=0.91  Score=44.26  Aligned_cols=158  Identities=14%  Similarity=0.151  Sum_probs=85.0

Q ss_pred             ccceeeeecCceeEEEEEEECCE-EEEEeCCCccc--ccc--C-CCCCcCCcccccccCCCCeEeeEEEEEecC------
Q 006472          329 QRYYYATWKADGTRYMMLITIDG-CYLIDRCFNFR--RVQ--M-RFPCRNSNEGLGEKTHHFTLLDGEMIIDKL------  396 (643)
Q Consensus       329 ~~~Y~V~eK~DG~R~ll~i~~~~-vyLidR~~~~~--~v~--~-~FP~~~~~~~~~~~~~~~tlLDGElV~d~~------  396 (643)
                      ...|+|++|.||.-+.+...++. +.+++|.+-..  .++  + ..+..  +..+  .......+=||++..+.      
T Consensus       108 ~~~~~~~~KiDG~si~l~Y~~G~l~~a~TRGdG~~GeDiT~~~~~i~~i--p~~l--~~~~~~~iRGEl~~~~~~f~~~n  183 (313)
T d1ta8a_         108 PVAYCCELKIDGLAISLRYENGVFVRGATRGDGTVGENITENLRTVRSV--PMRL--TEPISVEVRGECYMPKQSFVALN  183 (313)
T ss_dssp             CCCEEEEEEECSEEEEEEEETTEEEEEEECTTSSEEEBCHHHHTTCTTS--CSBC--SSCCCEEEEEEEECCHHHHHHHH
T ss_pred             ccceeeeeecccceEEEEecCCcEEEeeecccchHHHHHHHhhhhhccc--cccc--cCCcceeeeeEEEEeccchhhhH
Confidence            45799999999999988877665 68999984311  111  1 11110  0111  11346788999997321      


Q ss_pred             ------CCC--------------C-------CcceEEEEeEeeecCCeeccCCCHHHHHHHHHHHhcCcccccccccccc
Q 006472          397 ------PDS--------------R-------RQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQS  449 (643)
Q Consensus       397 ------~~~--------------~-------~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~v~~p~~~~~~~~~~~  449 (643)
                            ...              .       ...+.|++|++....+...  ....+.+..+.+.....           
T Consensus       184 ~~~~~~~~~~f~N~RN~vaG~l~~k~~~~~~~~~l~f~~y~v~~~~~~~~--~~~~~~~~~l~~~g~~~-----------  250 (313)
T d1ta8a_         184 EEREENGQDIFANPRNAAAGSLRQLDTKIVAKRNLNTFLYTVADFGPMKA--KTQFEALEELSAIGFRT-----------  250 (313)
T ss_dssp             HHHHHTTCCCCSSHHHHHHHHHTCSBHHHHHTSCCEEEEEEESCCTTCCC--SBHHHHHHHHHHTTCCC-----------
T ss_pred             HHHHHhcccccccchhhhcccchhcccchhhhccccceeeecceeccccc--chhHHHhhhhhhcCCcC-----------
Confidence                  000              0       1347888888876554332  33455555555533211           


Q ss_pred             CCCCccCCCCCcEEEecceeechhHHHHHHHh---cccccCCCceEEEEeCCCCC------ccCCCCCeEEEecC
Q 006472          450 RNPYYRYDLEPFRVRRKDFWLLSTVNKLLKEF---IPKLSHDADGLVFQGWDDPY------VPRTHEGLLKWKYA  515 (643)
Q Consensus       450 ~~p~~~~~~~pf~I~~K~~~~~~~~~~ll~~~---~~~l~h~~DGLIf~p~~spY------~~G~~~~llKWKP~  515 (643)
                       .+.        ....+   .+..+..+.+.+   -..+.++.||||++-.+-.+      +.+....-+=||+|
T Consensus       251 -~~~--------~~~~~---~~~ei~~~~~~~~~~R~~l~YeIDGIVikvn~~~~q~~lG~ts~~PrwAiA~KfP  313 (313)
T d1ta8a_         251 -NPE--------RQLCQ---SIDEVWAYIEEYHEKRSTLPYEIDGIVIKVNEFALQDELGFTVKAPRWAIAYKFP  313 (313)
T ss_dssp             -CTT--------CEEES---SHHHHHHHHHHHHHTGGGSSSCEEEEEEEESBHHHHHHHCBCSSSBSSEEEEECC
T ss_pred             -CCC--------eEEeC---CHHHHHHHHHHHHHhhhcCCCCCceEEEEEeCHHHHHHcCCcCCCCCceEEecCC
Confidence             111        01111   222333333333   24678999999999744332      22223456667765


No 36 
>d1dgsa3 d.142.2.2 (A:1-314) Adenylation domain of NAD+-dependent DNA ligase {Thermus filiformis [TaxId: 276]}
Probab=89.57  E-value=2  Score=41.89  Aligned_cols=158  Identities=15%  Similarity=0.109  Sum_probs=80.8

Q ss_pred             cceeeeecCceeEEEEEEECCEEEEEeCCCccc--cccCCCCCcCCccccccc---CCCCeEeeEEEEEecC--------
Q 006472          330 RYYYATWKADGTRYMMLITIDGCYLIDRCFNFR--RVQMRFPCRNSNEGLGEK---THHFTLLDGEMIIDKL--------  396 (643)
Q Consensus       330 ~~Y~V~eK~DG~R~ll~i~~~~vyLidR~~~~~--~v~~~FP~~~~~~~~~~~---~~~~tlLDGElV~d~~--------  396 (643)
                      ..|+|++|.||.=+ |+.. +|+.+++|.+-..  .++..+...   .++...   ......+=||++..+.        
T Consensus       109 ~~~~ve~KlDG~Si-L~y~-~Gv~~~TRGdG~~GeDiT~~~~~I---~~iP~~l~~~~~~l~IRGEl~i~~~~F~~~n~~  183 (314)
T d1dgsa3         109 SLYTVEHKVDGLSV-LYYE-EGVWSTGSGDGEVGEEVTQNLLTI---PTIPRRLKGVPDRLEVRGEVYMPIEAFLRLNEE  183 (314)
T ss_dssp             CEEEEEECCSCEEE-EEEE-TTEEEEEECSSSEEEBCTGGGTSS---TTSCSBCSSCCSEEEEEEEEECCHHHHHHHHHH
T ss_pred             chhhhhhccCcceE-EEec-CCEeEEeecCCceehhhHhhHhhh---cCcchhccCCCccceeeeeEEeecchHHHHHHH
Confidence            45999999999988 4444 4488899964321  222111111   111111   1234678999997431        


Q ss_pred             ----CCC--------------C-------CcceEEEEeEeeecCCee-ccCCCHHHHHHHHHHHhcCccccccccccccC
Q 006472          397 ----PDS--------------R-------RQERRYLIYDMMAINQAS-VIERPFYERWKMLEKEVIEPRNYERHNIYQSR  450 (643)
Q Consensus       397 ----~~~--------------~-------~~~~~yliFDiL~~~G~~-l~~~pf~eR~~~L~~~v~~p~~~~~~~~~~~~  450 (643)
                          .+.              .       ...+.|++|.+....+.. -......+.+..+.......            
T Consensus       184 ~~~~~~~~f~NpRN~aaG~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~~g~~~------------  251 (314)
T d1dgsa3         184 LEERGEKVFKNPRNAAAGSLRQKDPRVTAKRGLRATFYALGLGLGLEESGLKSQYELLLWLKEKGFPV------------  251 (314)
T ss_dssp             HHHHTCCCCSSHHHHHHHHHSCSSHHHHHHSCCEEECCCBCTTTTTTSCCCCBHHHHHHHHHHTTCCC------------
T ss_pred             HHHhcCCcccccchhhhhhhhcccchhhhhccccceeeeccccccccCCCcccHHHHHHhhhcccccC------------
Confidence                000              0       124566666665544332 23445677888777643211            


Q ss_pred             CCCccCCCCCcEEEecceeechhHHHHHHHh---cccccCCCceEEEEeCCCCC------ccCCCCCeEEEecC
Q 006472          451 NPYYRYDLEPFRVRRKDFWLLSTVNKLLKEF---IPKLSHDADGLVFQGWDDPY------VPRTHEGLLKWKYA  515 (643)
Q Consensus       451 ~p~~~~~~~pf~I~~K~~~~~~~~~~ll~~~---~~~l~h~~DGLIf~p~~spY------~~G~~~~llKWKP~  515 (643)
                      .        +..   +....+..+.++++.+   -..+.+..||||++-.+..+      +.+....-+=||+|
T Consensus       252 ~--------~~~---~~~~~~e~l~~~~~~~~~~R~~l~y~iDGiVikvnd~~~q~~LG~ts~~PrwAiA~KfP  314 (314)
T d1dgsa3         252 E--------HCY---EKALGAEGVEEVYRRGLAQRHALPFEADGVVLKLDDLTLWGELGYTARAPRFALAYKFP  314 (314)
T ss_dssp             C--------SCE---EEEEHHHHHHHHHHHHHHTTTTSSSCCCEEEEEESBTHHHHHSCBCSSCBSSEEEEECC
T ss_pred             C--------cce---EEECCHHHHHHHHHHHHHhhhcCCCCCCceEEEEeCHHHHHHhCcccCCCCceEEecCC
Confidence            0        000   1111223334444433   23677999999998654332      22223445556654


No 37 
>d1xdna_ d.142.2.4 (A:) RNA editing ligase MP52 {Trypanosoma brucei [TaxId: 5691]}
Probab=82.67  E-value=6.7  Score=36.80  Aligned_cols=109  Identities=16%  Similarity=0.114  Sum_probs=61.1

Q ss_pred             hhhhcccceeeeecCceeEEEEEEE----CCEEEEEeCCCccccccCCCCC----cCCc-cc------ccc-----cCCC
Q 006472          324 LQLLRQRYYYATWKADGTRYMMLIT----IDGCYLIDRCFNFRRVQMRFPC----RNSN-EG------LGE-----KTHH  383 (643)
Q Consensus       324 l~~l~~~~Y~V~eK~DG~R~ll~i~----~~~vyLidR~~~~~~v~~~FP~----~~~~-~~------~~~-----~~~~  383 (643)
                      ..-|....|.|+||.+|.-+-+++.    ++.+-.=.|+.-+ ..+-.|--    .... ..      +..     ....
T Consensus        23 ~~gl~~~ewVa~EKIHGaNFsii~~~~~dg~~V~~aKR~~~l-~~~e~Ffgy~~i~~~l~~~~~~l~~~l~~~~~v~~~~  101 (265)
T d1xdna_          23 KSGLAAQEWVACEKVHGTNFGIYLINQGDHEVVRFAKRSGIM-DPNENFFGYHILIDEFTAQIRILNDLLKQKYGLSRVG  101 (265)
T ss_dssp             HTTGGGSCEEEEEECCSEEEEEEEEEETTEEEEEEEETTEEC-CTTCCCTTGGGGHHHHHHHHHHHHHHHHHHHTCSCCS
T ss_pred             hcCcccceEEEEEeecCccEEEEEeecCCCcEEEEeeccccc-CCcccccchhhHHHHHHHHHHHHHHHHHhhhccCCcc
Confidence            3446678999999999999988773    2335555555332 11111110    0000 00      000     1123


Q ss_pred             CeEeeEEEEEecCC---------------C---------CCC-------cceEEEEeEeeecCC---eeccCCCHHHHHH
Q 006472          384 FTLLDGEMIIDKLP---------------D---------SRR-------QERRYLIYDMMAINQ---ASVIERPFYERWK  429 (643)
Q Consensus       384 ~tlLDGElV~d~~~---------------~---------~~~-------~~~~yliFDiL~~~G---~~l~~~pf~eR~~  429 (643)
                      ..++=|||.--.-+               +         -++       ....|++|||.+..+   +++.-+++.+=.+
T Consensus       102 ~~vvyGELfGg~Y~hp~v~~~~~~~~~~~g~~~~~~~~~iQk~~~v~Y~p~l~FyAFDI~~~~~~~~~~~~fl~~d~~~e  181 (265)
T d1xdna_         102 RLVLNGELFGAKYKHPLVPKSEKWCTLPNGKKFPIAGVQIQREPFPQYSPELHFFAFDIKYSVSGAEEDFVLLGYDEFVE  181 (265)
T ss_dssp             EEEEEEEEEEEECCCTTSCCCCCEEECTTSCEEEGGGCCSCCCSSCCCEEEEEEEEEEEEEESSCCGGGEEECCHHHHHH
T ss_pred             EEEEEEEecccccCCCcccccccccccccCccccccceeeccccccccCCCccEEEEEEEeccCCCcceeeeccHHHHHH
Confidence            47899999762100               0         011       137999999999865   3555678887666


Q ss_pred             HHHH
Q 006472          430 MLEK  433 (643)
Q Consensus       430 ~L~~  433 (643)
                      ...+
T Consensus       182 ~~~~  185 (265)
T d1xdna_         182 FSSK  185 (265)
T ss_dssp             HHHT
T ss_pred             HHhh
Confidence            6655


No 38 
>d1qxna_ c.46.1.3 (A:) Polysulfide-sulfur transferase (sulfide dehydrogenase, Sud) {Wolinella succinogenes [TaxId: 844]}
Probab=79.84  E-value=1.2  Score=37.88  Aligned_cols=83  Identities=18%  Similarity=0.273  Sum_probs=44.3

Q ss_pred             CCHHHHHHHHHHcCCCeeEEEEcCCCCCCCCcchhccCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeE
Q 006472          125 YSFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYI  204 (643)
Q Consensus       125 ~~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~V  204 (643)
                      -+|.++.+.++. +.++ .|||+..      +++++..+|...    .+....|.. .+...+.      .....++..|
T Consensus        25 Isp~e~~~ll~~-~~~~-~lIDvR~------~~E~~~~hip~i----~~a~~ip~~-~l~~~~~------~~~~~~~~~i   85 (137)
T d1qxna_          25 LSPKDAYKLLQE-NPDI-TLIDVRD------PDELKAMGKPDV----KNYKHMSRG-KLEPLLA------KSGLDPEKPV   85 (137)
T ss_dssp             ECHHHHHHHHHH-CTTS-EEEECCC------HHHHHHTCEECC----SSEEECCTT-TSHHHHH------HHCCCTTSCE
T ss_pred             EcHHHHHHHHHc-CcCE-EEEECCc------HHHHHHhccccc----cccccCCcc-ccccccc------ccccCcccce
Confidence            468888887764 3344 6889983      345665554221    110012221 1121111      1113467889


Q ss_pred             EEEcCCCCChhHHHHHHHHHHhcCC
Q 006472          205 LVHCTHGHNRTGYMIVHFLMRSQSM  229 (643)
Q Consensus       205 lVHC~~G~~RSG~li~aYLm~~~g~  229 (643)
                      +|+|..| +||. .++.+|. ..|+
T Consensus        86 vvyC~~G-~rs~-~aa~~L~-~~G~  107 (137)
T d1qxna_          86 VVFCKTA-ARAA-LAGKTLR-EYGF  107 (137)
T ss_dssp             EEECCSS-SCHH-HHHHHHH-HHTC
T ss_pred             eeeeccc-chHH-HHHHHHH-HcCC
Confidence            9999988 6765 4455554 4576


No 39 
>d1rhsa2 c.46.1.2 (A:150-293) Rhodanese {Cow (Bos taurus) [TaxId: 9913]}
Probab=67.48  E-value=3.7  Score=35.00  Aligned_cols=93  Identities=15%  Similarity=0.189  Sum_probs=46.7

Q ss_pred             CCHHHHHHHHHHcCCCeeEEEEcCCCCCC------CCcchhccCC-c-EEEEeecc----CCCCCCCHHHHHHHHHHHHH
Q 006472          125 YSFKQVIHQLRVLGRKLGLVIDLTNTTRY------YPTSDLKKEG-I-KHVKIQCK----GRDAVPDNASVNNFVYEVTQ  192 (643)
Q Consensus       125 ~~~~~l~~~~~~~~~~I~~VIdLt~~~~~------y~~~~~~~~g-I-~y~~ip~~----d~~~~P~~~~i~~f~~~v~~  192 (643)
                      -+.+++.+.+...  + ..|||.....+|      +++.... .| | .-+.+|..    ..+..++.+.+.+.+...  
T Consensus        13 ~~~~ev~~~l~~~--~-~~iiD~R~~~ef~G~~~~~~~~~~~-~GhIpgA~~ip~~~~~~~~~~~~~~~~l~~~~~~~--   86 (144)
T d1rhsa2          13 KTYEQVLENLESK--R-FQLVDSRAQGRYLGTQPEPDAVGLD-SGHIRGSVNMPFMNFLTEDGFEKSPEELRAMFEAK--   86 (144)
T ss_dssp             ECHHHHHHHHHHC--C-SEEEECSCHHHHHTSSCCSSSSSCC-CCEETTCEECCGGGGBCTTSCBCCHHHHHHHHHHT--
T ss_pred             ecHHHHHHHhcCC--C-cEEEECCCCHHHcCCCCCCccccce-eeehhhhhhcchhhhhhhhcccCCHHHHHHHHHHc--
Confidence            4677888777542  2 458898843222      1111111 11 0 11223322    112344556565544221  


Q ss_pred             HHHhcccCCCeEEEEcCCCCChhHHHHHHHHHHhcCCC
Q 006472          193 FLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRSQSMS  230 (643)
Q Consensus       193 fi~~~~~~~~~VlVHC~~G~~RSG~li~aYLm~~~g~s  230 (643)
                          ...++..|.++|..|+ |++. ++ ++++..|+.
T Consensus        87 ----gi~~~~~iI~yC~sG~-~A~~-~~-~~l~~lG~~  117 (144)
T d1rhsa2          87 ----KVDLTKPLIATCRKGV-TACH-IA-LAAYLCGKP  117 (144)
T ss_dssp             ----TCCTTSCEEEECSSSS-THHH-HH-HHHHHTTCC
T ss_pred             ----CCCCCCCEEEEecccc-hHHH-HH-HHHHHcCCC
Confidence                1346788999998886 5543 33 455666763


No 40 
>d1zsqa2 c.45.1.3 (A:199-585) Myotubularin-related protein 2, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=65.60  E-value=3.9  Score=40.95  Aligned_cols=25  Identities=24%  Similarity=0.464  Sum_probs=19.6

Q ss_pred             CCCeEEEEcCCCCChhHHHHHHHHH
Q 006472          200 SKKYILVHCTHGHNRTGYMIVHFLM  224 (643)
Q Consensus       200 ~~~~VlVHC~~G~~RSG~li~aYLm  224 (643)
                      .+..|+|||..|-.||.-+++.-.+
T Consensus       211 ~~~sVlVh~sdGwD~T~qvsSL~ql  235 (387)
T d1zsqa2         211 GKTSVVVHSSDGWDRTAQLTSLAML  235 (387)
T ss_dssp             TCCCEEEECSSSSSHHHHHHHHHHH
T ss_pred             CCCeEEEeCCCCCchhHHHHHHHHH
Confidence            3458999999999999877665444


No 41 
>d1yt8a4 c.46.1.2 (A:243-372) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=61.52  E-value=11  Score=31.13  Aligned_cols=81  Identities=9%  Similarity=0.141  Sum_probs=43.5

Q ss_pred             CCHHHHHHHHHHcCCCeeEEEEcCCCCCCCCcchhccCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeE
Q 006472          125 YSFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYI  204 (643)
Q Consensus       125 ~~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~V  204 (643)
                      -++.++.+.+.. +..-..|||+...      .++....       ++|.-.+|. ..+..+..    .+.  ...++.|
T Consensus        25 I~~~e~~~~l~~-~~~~~~liDvR~~------~e~~~gh-------ipgai~~p~-~~~~~~~~----~~~--~~~~~~i   83 (130)
T d1yt8a4          25 LDLAGLAQWQDE-HDRTTYLLDVRTP------EEYEAGH-------LPGSRSTPG-GQLVQETD----HVA--SVRGARL   83 (130)
T ss_dssp             ECHHHHHHHHHC-TTSCEEEEECSCH------HHHHHCB-------CTTCEECCH-HHHHHSHH----HHC--CSBTCEE
T ss_pred             cCHHHHHHHHHc-cCCCEEEEECCCc------HHHhcCc-------cCCcccccc-cccccccc----ccc--CCccceE
Confidence            356677665542 3233568899843      3444311       223222342 23332221    121  3567899


Q ss_pred             EEEcCCCCChhHHHHHHHHHHhcCC
Q 006472          205 LVHCTHGHNRTGYMIVHFLMRSQSM  229 (643)
Q Consensus       205 lVHC~~G~~RSG~li~aYLm~~~g~  229 (643)
                      +|+|..| .||. .++.+|.. .|+
T Consensus        84 vl~C~~G-~rS~-~aa~~L~~-~G~  105 (130)
T d1yt8a4          84 VLVDDDG-VRAN-MSASWLAQ-MGW  105 (130)
T ss_dssp             EEECSSS-SHHH-HHHHHHHH-TTC
T ss_pred             EeecCCC-ccHH-HHHHHHHH-cCC
Confidence            9999988 5765 56666765 576


No 42 
>d1gmxa_ c.46.1.3 (A:) Sulfurtransferase GlpE {Escherichia coli [TaxId: 562]}
Probab=55.53  E-value=15  Score=28.93  Aligned_cols=77  Identities=13%  Similarity=0.314  Sum_probs=45.0

Q ss_pred             CHHHHHHHHHHcCCCeeEEEEcCCCCCCCCcchhccCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEE
Q 006472          126 SFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYIL  205 (643)
Q Consensus       126 ~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~Vl  205 (643)
                      ++.++.+.++.  .++ .|||+..      +.+|....     |  +|.-..| .+.+..++       .+ ..++.+|+
T Consensus         8 s~~e~~~~l~~--~~~-~liDvR~------~~e~~~gh-----I--~gA~~ip-~~~l~~~~-------~~-~~~~~~iv   62 (108)
T d1gmxa_           8 NVADAHQKLQE--KEA-VLVDIRD------PQSFAMGH-----A--VQAFHLT-NDTLGAFM-------RD-NDFDTPVM   62 (108)
T ss_dssp             CHHHHHHHHHT--TCC-EEEECSC------HHHHHHCE-----E--TTCEECC-HHHHHHHH-------HH-SCTTSCEE
T ss_pred             CHHHHHHHHHC--CCe-EEEECCC------HHHHHhcC-----C--CCccccc-chhHHHHh-------hh-ccccCccc
Confidence            57788877764  233 6899984      34454321     2  2222344 24444433       22 24678899


Q ss_pred             EEcCCCCChhHHHHHHHHHHhcCCC
Q 006472          206 VHCTHGHNRTGYMIVHFLMRSQSMS  230 (643)
Q Consensus       206 VHC~~G~~RSG~li~aYLm~~~g~s  230 (643)
                      |+|..|. ||. .+|.+|.. .|++
T Consensus        63 v~c~~g~-rs~-~~a~~L~~-~G~~   84 (108)
T d1gmxa_          63 VMCYHGN-SSK-GAAQYLLQ-QGYD   84 (108)
T ss_dssp             EECSSSS-HHH-HHHHHHHH-HTCS
T ss_pred             ccCCCCh-HHH-HHHHHHHH-cCCC
Confidence            9999884 765 56666765 5774


No 43 
>d1yt8a1 c.46.1.2 (A:107-242) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=40.88  E-value=37  Score=27.80  Aligned_cols=80  Identities=16%  Similarity=0.286  Sum_probs=42.1

Q ss_pred             CCHHHHHHHHHHcCCCeeEEEEcCCCCCCCCcchhccCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeE
Q 006472          125 YSFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYI  204 (643)
Q Consensus       125 ~~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~V  204 (643)
                      -++.++.+.++. +.+ -.|||+...      .++....|       +|.-.+|.. .+...+   .+ +.  ..++..|
T Consensus        26 Is~~el~~~l~~-~~~-~~liDvR~~------~e~~~ghI-------pGAi~ip~~-~l~~~~---~~-l~--~~~~~~i   83 (136)
T d1yt8a1          26 LAAEEVQALLDA-RAE-AVILDARRF------DEYQTMSI-------PGGISVPGA-ELVLRV---AE-LA--PDPRTRV   83 (136)
T ss_dssp             ECHHHHHHHHHT-TCS-EEEEECSCH------HHHHHSBC-------TTCEECCGG-GHHHHH---HH-HC--CSTTSEE
T ss_pred             cCHHHHHHHHhc-CCC-cEEEEcCCh------hhccceec-------CCchhhhhh-HHHHHh---hc-cc--ccccceE
Confidence            467888776642 334 349999843      34443221       221123432 222222   11 11  2356789


Q ss_pred             EEEcCCCCChhHHHHHHHHHHhcCC
Q 006472          205 LVHCTHGHNRTGYMIVHFLMRSQSM  229 (643)
Q Consensus       205 lVHC~~G~~RSG~li~aYLm~~~g~  229 (643)
                      +|+|..| .||. .++.+|.. .|+
T Consensus        84 V~~C~~g-~rs~-~aa~~L~~-~G~  105 (136)
T d1yt8a1          84 IVNCAGR-TRSI-IGTQSLLN-AGI  105 (136)
T ss_dssp             EEECSSS-HHHH-HHHHHHHH-TTC
T ss_pred             EEEcCCC-CchH-HHHHHHHH-cCC
Confidence            9999888 5765 45556654 565


No 44 
>d1skza1 g.3.15.1 (A:7-58) Factor Xa inhibitor antistasin {Mexican leech (Haementeria officinalis) [TaxId: 6410]}
Probab=37.27  E-value=2  Score=28.77  Aligned_cols=19  Identities=37%  Similarity=0.571  Sum_probs=14.9

Q ss_pred             ccCCCeEEEEcCCCCChhH
Q 006472          198 KHSKKYILVHCTHGHNRTG  216 (643)
Q Consensus       198 ~~~~~~VlVHC~~G~~RSG  216 (643)
                      .-+|-..-|||-||+.||-
T Consensus        21 tcsgvrcrvhcphgfqrsr   39 (52)
T d1skza1          21 TCSGVRCRVHCPHGFQRSR   39 (52)
T ss_dssp             CBCCCSSCCCCTTCEEECT
T ss_pred             eeccceEEEECCCcccccc
Confidence            3456677899999999884


No 45 
>d1tq1a_ c.46.1.3 (A:) Thiosulfate sulfurtransferase/Senescence-associated protein {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=36.82  E-value=10  Score=30.63  Aligned_cols=29  Identities=21%  Similarity=0.331  Sum_probs=19.7

Q ss_pred             cCCCeEEEEcCCCCChhHHHHHHHHHHhcCCC
Q 006472          199 HSKKYILVHCTHGHNRTGYMIVHFLMRSQSMS  230 (643)
Q Consensus       199 ~~~~~VlVHC~~G~~RSG~li~aYLm~~~g~s  230 (643)
                      .++..|+|+|..|. ||. .++.+|.. .|++
T Consensus        70 ~~~~~iv~~C~~G~-rs~-~a~~~L~~-~G~~   98 (119)
T d1tq1a_          70 GQSDNIIVGCQSGG-RSI-KATTDLLH-AGFT   98 (119)
T ss_dssp             CTTSSEEEEESSCS-HHH-HHHHHHHH-HHCC
T ss_pred             CCCcEEEEEcCCcC-cHH-HHHHHHHh-cccC
Confidence            46789999999884 765 45555554 4653


No 46 
>d2gwfa1 c.46.1.4 (A:181-315) Ubiquitin carboxyl-terminal hydrolase 8, USP8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.09  E-value=33  Score=27.57  Aligned_cols=84  Identities=7%  Similarity=0.085  Sum_probs=40.8

Q ss_pred             CHHHHHHHHHHcCCCeeEEEEcCCCCCCCCcchhccCCcEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEE
Q 006472          126 SFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYIL  205 (643)
Q Consensus       126 ~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~~gI~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~Vl  205 (643)
                      ++++|.+.++....++ .|||+.... -|....+.  |-  +.+|..-....-....+...+.......-........|.
T Consensus         4 s~~eL~~~l~~~~~~~-liiDvR~~~-ey~~~hI~--gA--inip~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~iV   77 (135)
T d2gwfa1           4 TAKELYTMMTDKNISL-IIMDARRMQ-DYQDSCIL--HS--LSVPEEAISPGVTASWIEAHLPDDSKDTWKKRGNVEYVV   77 (135)
T ss_dssp             CHHHHHHHHHSTTSCE-EEEECSCHH-HHHHSCBT--TC--EECCGGGCCTTCCHHHHHHTSCHHHHHHHHTTTTSSEEE
T ss_pred             CHHHHHHHHhcCCCCE-EEEEecCCc-cccCCccC--Ce--EEeCHHHcccccchhhhhhhhhHHHHHHHhccCCCCeEE
Confidence            5788888877544444 499998432 12222222  21  345654321111223332221111111111234567899


Q ss_pred             EEcCCCCChh
Q 006472          206 VHCTHGHNRT  215 (643)
Q Consensus       206 VHC~~G~~RS  215 (643)
                      |||..|-.+.
T Consensus        78 ~yd~~s~~~~   87 (135)
T d2gwfa1          78 LLDWFSSAKD   87 (135)
T ss_dssp             EECSSCCGGG
T ss_pred             EEeCCCCccc
Confidence            9999887653


No 47 
>d1yt8a2 c.46.1.2 (A:6-106) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=33.94  E-value=79  Score=23.72  Aligned_cols=29  Identities=10%  Similarity=-0.030  Sum_probs=18.6

Q ss_pred             cCCCeEEEEcCCCCChhHHHHHHHHHHhcCCC
Q 006472          199 HSKKYILVHCTHGHNRTGYMIVHFLMRSQSMS  230 (643)
Q Consensus       199 ~~~~~VlVHC~~G~~RSG~li~aYLm~~~g~s  230 (643)
                      .....|+++|..| .||. .++.+ +...|++
T Consensus        56 ~~~~~vv~~~~~g-~~s~-~~~~~-l~~~G~~   84 (101)
T d1yt8a2          56 RRDTPITVYDDGE-GLAP-VAAQR-LHDLGYS   84 (101)
T ss_dssp             CTTSCEEEECSSS-SHHH-HHHHH-HHHTTCS
T ss_pred             ccCceeeeccchh-hhHH-HHHHH-HHHcCCC
Confidence            4567899999887 4664 33444 4556764


No 48 
>d3e46a1 a.5.2.1 (A:157-198) Ubiquitin-conjugating enzyme E2-25 kDa, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.54  E-value=28  Score=22.26  Aligned_cols=28  Identities=25%  Similarity=0.476  Sum_probs=21.0

Q ss_pred             cCCCCChhHHHHHHHHHHhcCCCHHHHHHHH
Q 006472          208 CTHGHNRTGYMIVHFLMRSQSMSVAQAIKKF  238 (643)
Q Consensus       208 C~~G~~RSG~li~aYLm~~~g~s~~eAi~~~  238 (643)
                      |..|+.|.+.+++.   ....|.++.|-+.+
T Consensus        14 ca~gf~knavi~al---sskswdvetatell   41 (42)
T d3e46a1          14 CAAGFDRNAVIVAL---SSKSWDVETATELL   41 (42)
T ss_dssp             HHTTCCHHHHHHHH---HHTTTCHHHHHHHH
T ss_pred             HHccccccceeeee---ccCccchhhHHHhh
Confidence            99999998765542   34699999987653


No 49 
>d1iiba_ c.44.2.1 (A:) Enzyme IIB-cellobiose {Escherichia coli [TaxId: 562]}
Probab=23.16  E-value=9.9  Score=30.44  Aligned_cols=16  Identities=25%  Similarity=0.405  Sum_probs=12.1

Q ss_pred             CeEEEEcCCCCChhHHH
Q 006472          202 KYILVHCTHGHNRTGYM  218 (643)
Q Consensus       202 ~~VlVHC~~G~~RSG~l  218 (643)
                      +.|++.|.+|.+ |++|
T Consensus         2 k~IlL~C~~G~S-Ts~l   17 (103)
T d1iiba_           2 KHIYLFSSAGMS-TSLL   17 (103)
T ss_dssp             EEEEEEESCHHH-HHHH
T ss_pred             CEEEEECCCCcc-HHHH
Confidence            579999999986 4443


No 50 
>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}
Probab=22.54  E-value=31  Score=26.13  Aligned_cols=27  Identities=22%  Similarity=0.448  Sum_probs=21.4

Q ss_pred             CCCeEEEEcCCCCChhHHHHHHHHHHhcCCC
Q 006472          200 SKKYILVHCTHGHNRTGYMIVHFLMRSQSMS  230 (643)
Q Consensus       200 ~~~~VlVHC~~G~~RSG~li~aYLm~~~g~s  230 (643)
                      +|+.|+|=   |+|+||.-+|.||.. +|+.
T Consensus         4 ~~K~v~Vi---GlG~sG~s~a~~L~~-~g~~   30 (93)
T d2jfga1           4 QGKNVVII---GLGLTGLSCVDFFLA-RGVT   30 (93)
T ss_dssp             TTCCEEEE---CCSHHHHHHHHHHHH-TTCC
T ss_pred             CCCEEEEE---eECHHHHHHHHHHHH-CCCE
Confidence            46678775   999999999999987 4654


No 51 
>d1e0ca2 c.46.1.2 (A:136-271) Sulfurtransferase {Azotobacter vinelandii [TaxId: 354]}
Probab=20.86  E-value=43  Score=27.44  Aligned_cols=30  Identities=23%  Similarity=0.522  Sum_probs=20.2

Q ss_pred             ccCCCeEEEEcCCCCChhHHHHHHHHHHhcCCC
Q 006472          198 KHSKKYILVHCTHGHNRTGYMIVHFLMRSQSMS  230 (643)
Q Consensus       198 ~~~~~~VlVHC~~G~~RSG~li~aYLm~~~g~s  230 (643)
                      ..++..|+++|..|. ||+ . ++++++..|++
T Consensus        85 i~~~~~vV~yC~~G~-~a~-~-~~~~l~~~G~~  114 (136)
T d1e0ca2          85 ITPDKEIVTHCQTHH-RSG-L-TYLIAKALGYP  114 (136)
T ss_dssp             CCTTSEEEEECSSSS-HHH-H-HHHHHHHTTCS
T ss_pred             cCCCCceEEeCCChH-HHH-H-HHHHHHHcCCC
Confidence            356789999998874 554 3 34555666763


Done!