BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006477
(643 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255555987|ref|XP_002519028.1| RNA polymerase-associated protein RTF1, putative [Ricinus communis]
gi|223541691|gb|EEF43239.1| RNA polymerase-associated protein RTF1, putative [Ricinus communis]
Length = 660
Score = 867 bits (2241), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 494/661 (74%), Positives = 551/661 (83%), Gaps = 19/661 (2%)
Query: 1 MADLENLLLEAAGRTNSAGRNRHSASSSKRRREGSYSGSDSRDDDSDDNRGYGS--RKPS 58
MADLENLLLEAAGRT ++GRNR++ S+RRREGSYS S D D + G RKPS
Sbjct: 1 MADLENLLLEAAGRTGTSGRNRNALPPSRRRREGSYSDGGSDSRDDDSDDDRGYSSRKPS 60
Query: 59 GSQVPLKKRLDPAERDDDQGSQEEGDYDGGASEHEGDSS-----------NESDDDNHGQ 107
GSQVPLKKRLDP ERDDDQGSQ+EGDYD G S+ EGDSS NE D Q
Sbjct: 61 GSQVPLKKRLDPTERDDDQGSQDEGDYDDGNSDREGDSSDGSDVGEDLYKNEDDRRKLAQ 120
Query: 108 MTELEREMMIFERDDKKVDKNLRDKFRSRRE-ERSTRSTKETPPLPSSRSARLAARSADR 166
M+ELEREM++ ER DKK DKNL ++ RS+RE ER+TRS KETPPLPSSR R +ARSADR
Sbjct: 121 MSELEREMILSERADKKGDKNLTERIRSKRESERTTRSRKETPPLPSSRGVRTSARSADR 180
Query: 167 AAAKDDALNELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSPVKRKAFTPAGLSSSSQSE 226
AAAKDDALNEL+A+RLKQQDPEAHR+LRDASR GSGSR SP+KRK FT + SSS SE
Sbjct: 181 AAAKDDALNELKARRLKQQDPEAHRKLRDASRRGSGSRGFSPIKRKRFT-SASLSSSSSE 239
Query: 227 SESRSHSDDEGSTGDGGMADSDDDGAPGSGRPTYDDIKEITIRRSKLAKWFMEPFFEELI 286
SESRSHS+DEGSTGDGGMADSDDDG PGS PT+DDI+EITIRRSKLAKWFMEP+FEELI
Sbjct: 240 SESRSHSEDEGSTGDGGMADSDDDGEPGSQGPTFDDIREITIRRSKLAKWFMEPWFEELI 299
Query: 287 VGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQ 346
VGCFVRVGIGRSK+GPIYRLC+VRNVDA +PDR YKLEN+TT KYLNV WGNESSAARWQ
Sbjct: 300 VGCFVRVGIGRSKSGPIYRLCLVRNVDAADPDRPYKLENKTTYKYLNVIWGNESSAARWQ 359
Query: 347 MAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQE 406
MAM+SDS P E+E+KQW+REVER+ GRMP+KQD+LEKKE+I+K NTFVYSAATVKQMLQE
Sbjct: 360 MAMISDSAPTEDEYKQWVREVERSGGRMPTKQDILEKKEAIRKSNTFVYSAATVKQMLQE 419
Query: 407 KKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKRLQELEASRDSKVKDAKAIRL 466
KKSASSRPLNVAAEKDRLRRELEVAQS+ D+ ++ERI+ R+QELEASR ++ KDAKAIRL
Sbjct: 420 KKSASSRPLNVAAEKDRLRRELEVAQSKQDDAEVERIRARIQELEASRQTQGKDAKAIRL 479
Query: 467 AEMNRKNRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKP-GEEVTAEAN 525
AEMNRKNR ENF+NASELK VNTSLKAGEAGYDPFSRRWTRSRNYY+SKP G + A N
Sbjct: 480 AEMNRKNRAENFRNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPAGGDAAAATN 539
Query: 526 GDKNGVPGGANGEEGATG---EVGMAATEAALEAAAGAGKLVDTNAPLDLGTESNMLHDF 582
+ +G AN E A G E GMAAT AALEAAA AGKLVDT AP+D GTESN LH+F
Sbjct: 540 NEASGTVAVANKTESAAGVSAEAGMAATAAALEAAADAGKLVDTAAPVDQGTESNTLHNF 599
Query: 583 ELDISLNALKKFGGPQGVLAGFMARKQRIEATVGCQVPENDGRRHALTLTVGDYKRRRGL 642
EL ISL AL+KFGG QG AGFMARKQRIEAT+GC+V END +RH LTLTV DYKRRRGL
Sbjct: 600 ELPISLTALQKFGGAQGAQAGFMARKQRIEATIGCRVSENDEKRHVLTLTVSDYKRRRGL 659
Query: 643 L 643
L
Sbjct: 660 L 660
>gi|356521329|ref|XP_003529309.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Glycine
max]
Length = 656
Score = 857 bits (2213), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/660 (73%), Positives = 546/660 (82%), Gaps = 21/660 (3%)
Query: 1 MADLENLLLEAAGRTNSAGRNRHSASSSKRRREGSYS--GSDSRDDDSDDNRGYGSRKPS 58
MADLENLLLEAAGRT +AGRNRHS SS+RR +G+YS GSDSRD+DSDD Y SRKPS
Sbjct: 1 MADLENLLLEAAGRTGTAGRNRHSLPSSRRRHDGAYSDGGSDSRDEDSDDELNYASRKPS 60
Query: 59 GSQVPLKKRLDPAERDDDQGSQEEGDYDGGASEHEGDSSNES--------DDDNH---GQ 107
GSQVPLKKRLDP ERDDD GSQEE D D G S+ +GDSS+ES D+D+ +
Sbjct: 61 GSQVPLKKRLDPTERDDDLGSQEEAD-DDGRSDCDGDSSDESNIGDDLYKDEDDRRKLSE 119
Query: 108 MTELEREMMIFERDDKKVDKNLRDKFRSRREE-RSTRSTKETPPLPSSRSARLAARSADR 166
MTEL+REM++ +R KK DKNL K S+RE+ + K++PP+ SSR R +ARSADR
Sbjct: 120 MTELQREMILSDRATKKDDKNLLGKIASKREKGKVAVPRKQSPPMSSSR-MRASARSADR 178
Query: 167 AAAKDDALNELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSPVKRKAFTPAGLSSSSQSE 226
+A K+DALNELRAKRLKQQDPEAHRRLR+ASR +GSR SP KRK FT LSSSS SE
Sbjct: 179 SA-KNDALNELRAKRLKQQDPEAHRRLREASRN-AGSRHFSPPKRKPFTSTSLSSSSHSE 236
Query: 227 SESRSHSDDEGSTGDGGMADSDDDGA-PGSGRPTYDDIKEITIRRSKLAKWFMEPFFEEL 285
SESRSHSDDEGSTGDGG+ DSDDD A GS P++ D+KEITIRRSKLAKWFMEPFFEEL
Sbjct: 237 SESRSHSDDEGSTGDGGIVDSDDDRALAGSEGPSFQDVKEITIRRSKLAKWFMEPFFEEL 296
Query: 286 IVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARW 345
IVGCFVRVGIGRSK GPIYRLCMV+NVDA+EPDR YKLEN+TT KYLNV WGNESSAARW
Sbjct: 297 IVGCFVRVGIGRSKTGPIYRLCMVKNVDASEPDRQYKLENKTTYKYLNVVWGNESSAARW 356
Query: 346 QMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQ 405
QMAMVSDS PLEEEFKQW++EV+R+ GRMPSKQDVLEKK++IQK TFVYSAATVKQMLQ
Sbjct: 357 QMAMVSDSAPLEEEFKQWVKEVDRSGGRMPSKQDVLEKKQAIQKAITFVYSAATVKQMLQ 416
Query: 406 EKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKRLQELEASRDSKVKDAKAIR 465
EKKSAS+RPLNVAAEKDRLRRELE+AQS++DE ++ERIK RL ELEASR +K KDAKA++
Sbjct: 417 EKKSASTRPLNVAAEKDRLRRELEIAQSKYDEAEVERIKTRLLELEASRQAKQKDAKALK 476
Query: 466 LAEMNRKNRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEAN 525
LAEMNRKNR ENFKNASE+K VNT LKAGEAGYDPFSRRWTRSRNYY +KPGE+ A N
Sbjct: 477 LAEMNRKNRFENFKNASEMKPVNTGLKAGEAGYDPFSRRWTRSRNYYAAKPGEKAAAGNN 536
Query: 526 GDKNGVPGGANGEEGA--TGEVGMAATEAALEAAAGAGKLVDTNAPLDLGTESNMLHDFE 583
V G + GA T E GM AT AALEAAAGAGKLVDT+AP+D GTESNMLH+FE
Sbjct: 537 SVNGNVAGAGSNGTGAPVTAEAGMVATAAALEAAAGAGKLVDTSAPVDQGTESNMLHNFE 596
Query: 584 LDISLNALKKFGGPQGVLAGFMARKQRIEATVGCQVPENDGRRHALTLTVGDYKRRRGLL 643
L ISL L+KFGG QG AGFMARKQ+IEATVG +V ENDGRRHALTLTV DYKRRRGLL
Sbjct: 597 LPISLALLQKFGGAQGAQAGFMARKQKIEATVGFRVSENDGRRHALTLTVSDYKRRRGLL 656
>gi|224113965|ref|XP_002316628.1| PAF1 complex component [Populus trichocarpa]
gi|222859693|gb|EEE97240.1| PAF1 complex component [Populus trichocarpa]
Length = 664
Score = 854 bits (2206), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 474/664 (71%), Positives = 542/664 (81%), Gaps = 21/664 (3%)
Query: 1 MADLENLLLEAAGRTNSAGRNRHSASSSKRRR-EGSYSGSDSRDDDSDDNRG--YGSRKP 57
MADLENLLLEAAGRT +GRNR+S S+RR+ EGSYS S D + Y SRKP
Sbjct: 1 MADLENLLLEAAGRTGKSGRNRNSLPPSRRRKQEGSYSDGGSDSRDDGSDDDRGYASRKP 60
Query: 58 SGSQVPLKKRLDPAERDDDQGSQEEGDYDGGASEHEGDSSNESD--DDNH---------G 106
SGSQVPLKKRL+ ERDD+ GSQEEGDYD G S+ EG+SS+ SD DD +
Sbjct: 61 SGSQVPLKKRLETNERDDEGGSQEEGDYDDGGSDREGESSDGSDIGDDLYKDEDDRQKLA 120
Query: 107 QMTELEREMMIFERDDKKVDKNLRDKFRSRRE-ERSTRSTKETPPLPSSRSARLAARSAD 165
QM+EL+RE+++ +R DKK DK+L +K RS+R+ ++ TRS KETPPLPSSR R +ARSAD
Sbjct: 121 QMSELDRELILADRADKKGDKHLTEKIRSKRDNDKPTRSRKETPPLPSSRGVRSSARSAD 180
Query: 166 RAAAKDDALNELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSPVKRKAFTPAGLSSSSQS 225
RAAAKDDALNELRAKRLKQQDPEAHR+LRDASRG +GSR + VK+ FT A LSSSS
Sbjct: 181 RAAAKDDALNELRAKRLKQQDPEAHRKLRDASRGSAGSRGFAQVKKNNFTSARLSSSSSE 240
Query: 226 ESESRSHSD-DEGSTGDGGMADSDDDGAPGSGRPTYDDIKEITIRRSKLAKWFMEPFFEE 284
DEGSTGDGGMADSD+DG PGS PTY+DIKEITIRR+KLAKWFMEP+FEE
Sbjct: 241 SESGSRSHSEDEGSTGDGGMADSDEDGDPGSRGPTYEDIKEITIRRTKLAKWFMEPWFEE 300
Query: 285 LIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAAR 344
LI+GCFVRVGIGRSK GP+YRLCMVRNVDA EPD+ YKLEN++T KYLNVTWG +SSAAR
Sbjct: 301 LIIGCFVRVGIGRSKTGPVYRLCMVRNVDAAEPDKPYKLENKSTYKYLNVTWGADSSAAR 360
Query: 345 WQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKESIQKINTFVYSAATVKQML 404
WQMAMVSDS P EEE+KQW+RE ER GR+PSKQD+LEKKE+I+K NTFVYSAATVKQML
Sbjct: 361 WQMAMVSDSAPTEEEYKQWVREAERGGGRLPSKQDILEKKEAIRKSNTFVYSAATVKQML 420
Query: 405 QEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKRLQELEASRDSKVKDAKAI 464
QEKKSASSRPLNVAAEKDRLRRELE+AQSRHDE ++ERI+ R+ ELEASR +KVKDAKA+
Sbjct: 421 QEKKSASSRPLNVAAEKDRLRRELEIAQSRHDEAEVERIEARILELEASRQAKVKDAKAL 480
Query: 465 RLAEMNRKNRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKP--GEEVTA 522
RLAEMNRKNRVENF+NASELK +NT LKAGEAGYDPFSRRWTRSRNYY+S P G++ A
Sbjct: 481 RLAEMNRKNRVENFRNASELKPINTGLKAGEAGYDPFSRRWTRSRNYYVSNPAGGDDAVA 540
Query: 523 EANGDKNGVPGGANGEE---GATGEVGMAATEAALEAAAGAGKLVDTNAPLDLGTESNML 579
+N + N A+ + GA E G+AAT AAL+AAA AGKLVDT+AP+D GTESN +
Sbjct: 541 ASNSEANDTAALADSDHVVAGAISESGVAATAAALDAAADAGKLVDTSAPVDQGTESNTM 600
Query: 580 HDFELDISLNALKKFGGPQGVLAGFMARKQRIEATVGCQVPENDGRRHALTLTVGDYKRR 639
H+FEL+ISL AL+KF GPQG AGFMARKQRIEA VGCQV ENDGRRHALTLTVGDYKRR
Sbjct: 601 HNFELEISLIALQKFRGPQGAHAGFMARKQRIEANVGCQVRENDGRRHALTLTVGDYKRR 660
Query: 640 RGLL 643
RGLL
Sbjct: 661 RGLL 664
>gi|356548759|ref|XP_003542767.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Glycine
max]
Length = 656
Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/660 (72%), Positives = 538/660 (81%), Gaps = 21/660 (3%)
Query: 1 MADLENLLLEAAGRTNSAGRNRHSASSSKRRREGSYSGSDSRDDDSDDNR--GYGSRKPS 58
MADLENLLLEAAGRT +AGRNRHS S+RR +G+YS S D D + Y SRKPS
Sbjct: 1 MADLENLLLEAAGRTGTAGRNRHSLPPSRRRHDGAYSDGGSDSRDDDSDDELNYASRKPS 60
Query: 59 GSQVPLKKRLDPAERDDDQGSQEEGDYDGGASEHEGDSSNES--------DDDNH---GQ 107
GSQVPLKKRLDP ERDDD GSQEE D D G S+H+GDSS+ES D+D+ +
Sbjct: 61 GSQVPLKKRLDPTERDDDLGSQEEAD-DDGRSDHDGDSSDESNIGDDLYKDEDDRRKLSE 119
Query: 108 MTELEREMMIFERDDKKVDKNLRDKFRSRREE-RSTRSTKETPPLPSSRSARLAARSADR 166
MTEL+REM++ +R KK DKNL K S+RE+ ++ K++PP+ SSR R +ARSADR
Sbjct: 120 MTELQREMILSDRATKKDDKNLLGKIASKREKGKAAAPRKQSPPMSSSR-MRASARSADR 178
Query: 167 AAAKDDALNELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSPVKRKAFTPAGLSSSSQSE 226
+A K+DALNELRAKRLKQQDPEAHRRLR+ASR +G R SP KRK FT LSSSS SE
Sbjct: 179 SA-KNDALNELRAKRLKQQDPEAHRRLREASRN-AGPRHFSPPKRKTFTSTSLSSSSHSE 236
Query: 227 SESRSHSDDEGSTGDGGMADSDDDGA-PGSGRPTYDDIKEITIRRSKLAKWFMEPFFEEL 285
SESRSHSDDEGSTGDGG+ADSDDD A GS P++ DIKEITIRRSKLAKWFMEPFFEEL
Sbjct: 237 SESRSHSDDEGSTGDGGIADSDDDRALAGSEGPSFQDIKEITIRRSKLAKWFMEPFFEEL 296
Query: 286 IVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARW 345
IVGCFVRVGIGRSK GPIYRLCMV+NVDA+EPDR YKLEN+TT KYLNV WGNESSAARW
Sbjct: 297 IVGCFVRVGIGRSKTGPIYRLCMVKNVDASEPDRQYKLENKTTYKYLNVVWGNESSAARW 356
Query: 346 QMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQ 405
QMAMVSDS P+EEEFKQW++EV+ + GRMPSKQDVLEKK++IQK TFVYSAATVKQMLQ
Sbjct: 357 QMAMVSDSAPMEEEFKQWVKEVDCSGGRMPSKQDVLEKKQAIQKAITFVYSAATVKQMLQ 416
Query: 406 EKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKRLQELEASRDSKVKDAKAIR 465
EKKSAS+RPLNVAAEKDRLRRELE+AQS+HDE ++ERIK RLQELEASR +K KDAKA++
Sbjct: 417 EKKSASTRPLNVAAEKDRLRRELEIAQSKHDEAEVERIKTRLQELEASRQAKQKDAKALK 476
Query: 466 LAEMNRKNRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEAN 525
LAEMNRKNR ENFKNASELK VN LKAGEAGYDPFSRRWTRSRNYY +KPGE+ A N
Sbjct: 477 LAEMNRKNRFENFKNASELKPVNIGLKAGEAGYDPFSRRWTRSRNYYAAKPGEKAAAGNN 536
Query: 526 GDKNGVPGGANGEEGA--TGEVGMAATEAALEAAAGAGKLVDTNAPLDLGTESNMLHDFE 583
V G + GA T E GM AT AALEAAAGAGKLVDT+AP+D GTESNMLH+FE
Sbjct: 537 IVNGNVAGAGSNATGAPVTAEAGMVATAAALEAAAGAGKLVDTSAPVDQGTESNMLHNFE 596
Query: 584 LDISLNALKKFGGPQGVLAGFMARKQRIEATVGCQVPENDGRRHALTLTVGDYKRRRGLL 643
L ISL L+K+GG G AGFMARKQRIE+TVG +V ENDGRRHALTLTV DYKRRRGLL
Sbjct: 597 LPISLALLQKYGGAPGAQAGFMARKQRIESTVGFRVSENDGRRHALTLTVSDYKRRRGLL 656
>gi|224078932|ref|XP_002305685.1| PAF1 complex component [Populus trichocarpa]
gi|222848649|gb|EEE86196.1| PAF1 complex component [Populus trichocarpa]
Length = 662
Score = 847 bits (2189), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/664 (72%), Positives = 548/664 (82%), Gaps = 23/664 (3%)
Query: 1 MADLENLLLEAAGRTNSAGRNRHSASSSKRR-REGSYSGSDSRDDDSDDNRG--YGSRKP 57
MADLENLLLEAAGRT +GRNR+S S+RR REGSYS S D D + Y +RKP
Sbjct: 1 MADLENLLLEAAGRTGKSGRNRNSILPSRRRKREGSYSDGGSDSRDDDSDDDRGYANRKP 60
Query: 58 SGSQVPLKKRLDPAERDDDQGSQEEGDYDGGASEHEGDSSNESD--DDNH---------G 106
SGSQVPLKKRL+ ERD ++GSQ+EGDYDGG S+ EG SS+ESD DD +
Sbjct: 61 SGSQVPLKKRLETNERDGEEGSQDEGDYDGGGSDREGGSSDESDIGDDLYKDEDDRKKLA 120
Query: 107 QMTELEREMMIFERDDKKVDKNLRDKFRSRRE-ERSTRSTKETPPLPSSRSARLAARSAD 165
QM+EL+RE+++ +R DKK DK+L +K R +R+ ++ TRS KETPPLPSSR R +ARSAD
Sbjct: 121 QMSELDRELILADRADKKGDKHLTEKIRLKRDNDKPTRSRKETPPLPSSRGVRSSARSAD 180
Query: 166 RAAAKDDALNELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSPVKRKAFTPAGLSSSSQS 225
RAAAKDDALNELRAKRLKQQDPEAHR+LRD SRG +GSR S VK+ FT + SSS S
Sbjct: 181 RAAAKDDALNELRAKRLKQQDPEAHRKLRDVSRGSAGSRGFSQVKKNNFT-SASLSSSSS 239
Query: 226 ESESRSHSDDEGSTGDGGMADSDDDGAPGSGRPTYDDIKEITIRRSKLAKWFMEPFFEEL 285
ES SRSHS+DEGSTGDGGMADSD+D PGS PTY+DIKEITIRR+KLAKWFMEP+FEEL
Sbjct: 240 ESGSRSHSEDEGSTGDGGMADSDEDVEPGSKGPTYEDIKEITIRRTKLAKWFMEPWFEEL 299
Query: 286 IVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARW 345
I+GCFVRVGIGRSK+GP+YRLCMVRNVDA EPD+ YKLEN++T KYLNVTWG ++SAARW
Sbjct: 300 IIGCFVRVGIGRSKSGPVYRLCMVRNVDAAEPDKPYKLENKSTYKYLNVTWGADTSAARW 359
Query: 346 QMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQ 405
QMAMVSDS P EEE+KQW+REVE GR+PSKQD+LEKKE+I+K NTFVYSAATVKQMLQ
Sbjct: 360 QMAMVSDSGPTEEEYKQWVREVECGGGRLPSKQDILEKKEAIRKSNTFVYSAATVKQMLQ 419
Query: 406 EKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKRLQELEASRDSKVKDAKAIR 465
EKKSASSRPLNVAAEKDRLRRELE+AQS+HDE ++ERI R++ELEASR +KVKDAKAIR
Sbjct: 420 EKKSASSRPLNVAAEKDRLRRELEIAQSKHDEAEVERINARIEELEASRHAKVKDAKAIR 479
Query: 466 LAEMNRKNRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKPGE------E 519
LAEMNRKNRVENF+NASE+K VNT LKAGEAGYDPFSRRWTRSRNYY+SKP E
Sbjct: 480 LAEMNRKNRVENFRNASEMKPVNTGLKAGEAGYDPFSRRWTRSRNYYVSKPAEADDPVAT 539
Query: 520 VTAEANGDKNGVPGGANGEEGATGEVGMAATEAALEAAAGAGKLVDTNAPLDLGTESNML 579
+EAN + V G E G+AATEAALEAAA AGKLVDT+AP+D GTESN +
Sbjct: 540 KISEAN-ETVAVAASNQVVAGVMSEAGVAATEAALEAAADAGKLVDTSAPVDQGTESNTM 598
Query: 580 HDFELDISLNALKKFGGPQGVLAGFMARKQRIEATVGCQVPENDGRRHALTLTVGDYKRR 639
H FEL+ISL AL++FGGPQG AGFMARKQRIEATVGC+VPENDGRRHALTLTVGDYKRR
Sbjct: 599 HSFELEISLIALQEFGGPQGAQAGFMARKQRIEATVGCRVPENDGRRHALTLTVGDYKRR 658
Query: 640 RGLL 643
RGLL
Sbjct: 659 RGLL 662
>gi|449462844|ref|XP_004149150.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Cucumis
sativus]
gi|449517636|ref|XP_004165851.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Cucumis
sativus]
Length = 660
Score = 807 bits (2085), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/662 (71%), Positives = 535/662 (80%), Gaps = 21/662 (3%)
Query: 1 MADLENLLLEAAGRTNSAGRNRHSASSSKRRREGSYSGSDSRDDDSDDNRG--YGSRKPS 58
MADLENLLLEAAGRTN+AGRNRHS S+R+REGSYS + S D D + Y SRKPS
Sbjct: 1 MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60
Query: 59 GSQVPLKKRLDPAERDDDQGSQEEGDYDGGASEHEGDSSNESDDDNHGQ----------- 107
GSQVPLKKRLDP ERDDD GSQEEG+ + SE EGDSS+ESD +
Sbjct: 61 GSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAG 120
Query: 108 MTELEREMMIFERDDKKVDKNLRDKFRSRREE-RSTRSTKETPPLPSSRSARLAARSADR 166
M+EL+REM++ +R KK DK+L + R++ ++ +S S KETPPLPSSR +ARSADR
Sbjct: 121 MSELQREMILSDRASKKNDKHLYESLRAKMDKGKSAPSRKETPPLPSSRIRS-SARSADR 179
Query: 167 AAAKDDALNELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSPVKRKAFTPAGLSSSSQSE 226
AAAKDDALNELRAKRLKQQDPEAHR+LRDASRG + SR SP KRK FT LSSSSQSE
Sbjct: 180 AAAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSE 239
Query: 227 SESRSHSDDEGSTGDGGMADSDDD-GAPGSGRPTYDDIKEITIRRSKLAKWFMEPFFEEL 285
SESR SDDEGSTGDGGM DSDD+ PGS PT++DIKE+TIRRSKLAKW MEPFFEEL
Sbjct: 240 SESRFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFFEEL 299
Query: 286 IVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARW 345
IVGCFVRVGIGRS++GPIYRLC+VRNVDATEPDR YKLEN+ T KYLNV WGNE+SAARW
Sbjct: 300 IVGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARW 359
Query: 346 QMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQ 405
QMAMVSDS PLE+E+KQW++EVER GRM SKQD+LEKKE+IQK+N FVYSAATVKQMLQ
Sbjct: 360 QMAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKVNNFVYSAATVKQMLQ 419
Query: 406 EKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKRLQELEASRDSKVKDAKAIR 465
+KKSAS+RPLN+AAEKDRLRRE++VA S++DE ++ERIK RLQ+LEASR ++KDAKAIR
Sbjct: 420 DKKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQLEASRRLQMKDAKAIR 479
Query: 466 LAEMNRKNRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEAN 525
LAEMNRKNRVENFKNASEL+ + LKAGEAGYDPFSRRWTRSRNYY+S GE A
Sbjct: 480 LAEMNRKNRVENFKNASELRPLK-DLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEA 538
Query: 526 GDK--NGVPGGAN--GEEGATGEVGMAATEAALEAAAGAGKLVDTNAPLDLGTESNMLHD 581
N P N E G T + GMAAT AALEAAAGAGKLVDTNAP+D GTESN LH+
Sbjct: 539 AGNSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHN 598
Query: 582 FELDISLNALKKFGGPQGVLAGFMARKQRIEATVGCQVPENDGRRHALTLTVGDYKRRRG 641
FEL ISL L+KFGG G AGF+ARKQRIEATVG QVPENDGRRHALTLTV DYKRRRG
Sbjct: 599 FELPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRG 658
Query: 642 LL 643
LL
Sbjct: 659 LL 660
>gi|297840459|ref|XP_002888111.1| At1g61040/T7P1_17 [Arabidopsis lyrata subsp. lyrata]
gi|297333952|gb|EFH64370.1| At1g61040/T7P1_17 [Arabidopsis lyrata subsp. lyrata]
Length = 643
Score = 747 bits (1929), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/669 (65%), Positives = 508/669 (75%), Gaps = 52/669 (7%)
Query: 1 MADLENLLLEAAGRTNSAGRNRHSASSSKRRREGSYSGSDSRDDDSDDN-RGYGSRKPSG 59
M DLENLLLEAAGRTNSAGR+RH SS RRREGSYS S D D RGY SRKPSG
Sbjct: 1 MGDLENLLLEAAGRTNSAGRSRHPPSS--RRREGSYSDGSSDSRDDSDEDRGYASRKPSG 58
Query: 60 SQVPLKKRLDPAERDDDQGSQEEGDYDGGASEHEGDSSNESD--DDNHGQ---------M 108
SQVPLKKRL+ AER+D + ++ EG Y G S+ EGDSS ESD DD + M
Sbjct: 59 SQVPLKKRLE-AERED-RAARVEGGYGDGPSDREGDSSEESDFGDDLYKNEEDRQKLAGM 116
Query: 109 TELEREMMIFERDDKKVDKNLRDKFRSRRE-ERSTRSTKETPPLPSSRSARLAARSADRA 167
TE +REM++ ER DKK DKN +K RS+RE E++ S KET PLP+SR R +ARSADRA
Sbjct: 117 TEFQREMILAERADKKGDKNFTEKLRSKRENEKTPVSKKETQPLPASRGVRSSARSADRA 176
Query: 168 AAKDDALNELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSPVKRKAFTPAGLSSSSQSES 227
AAKDDALNELRAKR+KQQDP A R+LRDAS+GGSGSR S +KRK + LSSSSQS+S
Sbjct: 177 AAKDDALNELRAKRMKQQDPAALRKLRDASKGGSGSRDFSSMKRKPLASSNLSSSSQSDS 236
Query: 228 ESRSHSDDEGSTGDGGMADSDDDGAPGSGRPTYDDIKEITIRRSKLAKWFMEPFFEELIV 287
+SRS SDDEGS + GM DSDDD S PT++D+KEITIRRSKLAKW MEPFFEELIV
Sbjct: 237 DSRSQSDDEGS--NAGMLDSDDDR---SDVPTFEDVKEITIRRSKLAKWLMEPFFEELIV 291
Query: 288 GCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQM 347
GCFVRVGIGRSK+GPIYRLC V+NVDAT+PD++YKLEN+TT KYLNV WGNE+SAARWQM
Sbjct: 292 GCFVRVGIGRSKSGPIYRLCWVKNVDATDPDKTYKLENKTTHKYLNVVWGNETSAARWQM 351
Query: 348 AMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEK 407
AM+SD PLEEE++QW+REVER +GRMP+KQD+ EKKE+IQ+IN+FVYSA TVKQMLQEK
Sbjct: 352 AMISDGHPLEEEYRQWIREVERTNGRMPTKQDISEKKEAIQRINSFVYSAETVKQMLQEK 411
Query: 408 KSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKRLQELEASRDSKVKDAKAIRLA 467
KSAS RP+NVAAEKDRLR+ELE+AQS++DE +ERIK ++++L+ASR+ K D KA++LA
Sbjct: 412 KSASVRPMNVAAEKDRLRKELEIAQSKNDEAGVERIKTKIKQLDASRNKKGVDKKALKLA 471
Query: 468 EMNRKNRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGD 527
EMN+KNR ENFKNASE+K ++ SLKAGEAGYDPFSRRWTRS NYY
Sbjct: 472 EMNKKNRAENFKNASEVKSISASLKAGEAGYDPFSRRWTRSSNYY--------------- 516
Query: 528 KNGVPGGANGEEGATGEVGMAATEAALEAAAGA-------------GKLVDTNAPLDLGT 574
NG G +GEE T T A + AG GKL+DT AP+ G
Sbjct: 517 -NGKNKGKDGEENETAVAAAVETNGA-DVGAGVEATEAALEAAAEAGKLIDTRAPIGQGA 574
Query: 575 ESNMLHDFELDISLNALKKFGGPQGVLAGFMARKQRIEATVGCQVPENDGRRHALTLTVG 634
E N LH+FEL +SL AL+K+GGPQGV FMARKQ EATVGC+V ENDG+RH LTLTV
Sbjct: 575 EHNQLHNFELSLSLTALQKYGGPQGVQKAFMARKQVTEATVGCRVAENDGKRHGLTLTVS 634
Query: 635 DYKRRRGLL 643
DYKRRRGLL
Sbjct: 635 DYKRRRGLL 643
>gi|15219855|ref|NP_176299.1| plus-3 domain-containing protein [Arabidopsis thaliana]
gi|12323334|gb|AAG51642.1|AC018908_8 unknown protein; 78902-80833 [Arabidopsis thaliana]
gi|332195649|gb|AEE33770.1| plus-3 domain-containing protein [Arabidopsis thaliana]
Length = 643
Score = 743 bits (1917), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/664 (66%), Positives = 513/664 (77%), Gaps = 42/664 (6%)
Query: 1 MADLENLLLEAAGRTNSAGRNRHSASSSKRRREGSYSGSDSRDDDSDDN-RGYGSRKPSG 59
M DLENLLLEAAGRTNSAGR+RH SS RRREGSYS S D D RGY SRKPSG
Sbjct: 1 MGDLENLLLEAAGRTNSAGRSRHPPSS--RRREGSYSDGSSDSRDDSDEDRGYASRKPSG 58
Query: 60 SQVPLKKRLDPAERDDDQGSQEEGDYDGGASEHEGDSSNESD--DDNHGQ---------M 108
SQVPLKKRL+ AER+D + ++ EG Y G S+ EGDSS ESD DD + M
Sbjct: 59 SQVPLKKRLE-AERED-RAARVEGGYGDGPSDREGDSSEESDFGDDLYKNEEDRQKLAGM 116
Query: 109 TELEREMMIFERDDKKVDKNLRDKFRSRRE-ERSTRSTKETPPLPSSRSARLAARSADRA 167
TE +REM++ ER DKK DKN +K RS+RE E++ S KET PLP+SR R +ARSADRA
Sbjct: 117 TEFQREMILSERADKKGDKNFTEKLRSKRESEKTPVSKKETQPLPASRGVRSSARSADRA 176
Query: 168 AAKDDALNELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSPVKRKAFTPAGLSSSSQSES 227
AAKDDALNELRAKR+KQQDP A R+LRDAS+GGSGSR S KRK + LSSSSQS+S
Sbjct: 177 AAKDDALNELRAKRMKQQDPAALRKLRDASKGGSGSRDFSSTKRKPLASSNLSSSSQSDS 236
Query: 228 ESRSHSDDEGSTGDGGMADSDDDGAPGSGRPTYDDIKEITIRRSKLAKWFMEPFFEELIV 287
+SRS SDDEGS +GGM DSDDD S PT++D+KE+TIRRSKLAKW MEPFFEELIV
Sbjct: 237 DSRSQSDDEGS--NGGMLDSDDDR---SDVPTFEDVKEVTIRRSKLAKWLMEPFFEELIV 291
Query: 288 GCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQM 347
GCFVRVGIGRSK+GPIYRLC V+NVDAT+PD++YKLEN+TT KYLNV WGNE+SAARWQM
Sbjct: 292 GCFVRVGIGRSKSGPIYRLCWVKNVDATDPDKTYKLENKTTHKYLNVVWGNETSAARWQM 351
Query: 348 AMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEK 407
AM+SD PLEEE++QW+REVER +GRMP+KQD+ EKKE+IQ+ N+FVYSA TVKQMLQEK
Sbjct: 352 AMISDGHPLEEEYRQWIREVERTNGRMPTKQDISEKKEAIQRTNSFVYSAETVKQMLQEK 411
Query: 408 KSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKRLQELEASRDSKVKDAKAIRLA 467
KSAS RP+NVAAEKDRLR+ELE+AQS++DE +ERIK ++++L+ASR+ K D KA++LA
Sbjct: 412 KSASVRPMNVAAEKDRLRKELEIAQSKNDEAGVERIKSKIKQLDASRNKKGVDKKALKLA 471
Query: 468 EMNRKNRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGD 527
EMN+KNR ENFKNASE+K + SLKAGEAGYDPFSRRWTRS NYY NG
Sbjct: 472 EMNKKNRAENFKNASEVKSITASLKAGEAGYDPFSRRWTRSSNYY------------NGK 519
Query: 528 KNGVPGGANGEE--------GATGEVGMAATEAALEAAAGAGKLVDTNAPLDLGTESNML 579
G G N GA G+ ATEAALEAAA AGKL+DT AP+ G E N L
Sbjct: 520 NKGKDGEENEAAVAAAVETNGADAGAGVEATEAALEAAAEAGKLIDTRAPIGQGAEHNQL 579
Query: 580 HDFELDISLNALKKFGGPQGVLAGFMARKQRIEATVGCQVPENDGRRHALTLTVGDYKRR 639
H+FEL +SL AL+K+GGPQGV FMARKQ EATVGC+V ENDG+RH LTLTV DYKRR
Sbjct: 580 HNFELSLSLTALQKYGGPQGVQKAFMARKQLTEATVGCRVAENDGKRHGLTLTVSDYKRR 639
Query: 640 RGLL 643
RGLL
Sbjct: 640 RGLL 643
>gi|20147193|gb|AAM10312.1| At1g61040/T7P1_17 [Arabidopsis thaliana]
Length = 643
Score = 740 bits (1910), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/664 (66%), Positives = 512/664 (77%), Gaps = 42/664 (6%)
Query: 1 MADLENLLLEAAGRTNSAGRNRHSASSSKRRREGSYSGSDSRDDDSDDN-RGYGSRKPSG 59
M DLENLLLEAAGRTNSAGR+ H SS RRREGSYS S D D RGY SRKPSG
Sbjct: 1 MGDLENLLLEAAGRTNSAGRSSHPPSS--RRREGSYSDGSSDSRDDSDEDRGYASRKPSG 58
Query: 60 SQVPLKKRLDPAERDDDQGSQEEGDYDGGASEHEGDSSNESD--DDNHGQ---------M 108
SQVPLKKRL+ AER+D + ++ EG Y G S+ EGDSS ESD DD + M
Sbjct: 59 SQVPLKKRLE-AERED-RAARVEGGYGDGPSDREGDSSEESDFGDDLYKNEEDRQKLAGM 116
Query: 109 TELEREMMIFERDDKKVDKNLRDKFRSRRE-ERSTRSTKETPPLPSSRSARLAARSADRA 167
TE +REM++ ER DKK DKN +K RS+RE E++ S KET PLP+SR R +ARSADRA
Sbjct: 117 TEFQREMILSERADKKGDKNFTEKLRSKRESEKTPVSKKETQPLPASRGVRSSARSADRA 176
Query: 168 AAKDDALNELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSPVKRKAFTPAGLSSSSQSES 227
AAKDDALNELRAKR+KQQDP A R+LRDAS+GGSGSR S KRK + LSSSSQS+S
Sbjct: 177 AAKDDALNELRAKRMKQQDPAALRKLRDASKGGSGSRDFSSTKRKPLASSNLSSSSQSDS 236
Query: 228 ESRSHSDDEGSTGDGGMADSDDDGAPGSGRPTYDDIKEITIRRSKLAKWFMEPFFEELIV 287
+SRS SDDEGS +GGM DSDDD S PT++D+KE+TIRRSKLAKW MEPFFEELIV
Sbjct: 237 DSRSQSDDEGS--NGGMLDSDDDR---SDVPTFEDVKEVTIRRSKLAKWLMEPFFEELIV 291
Query: 288 GCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQM 347
GCFVRVGIGRSK+GPIYRLC V+NVDAT+PD++YKLEN+TT KYLNV WGNE+SAARWQM
Sbjct: 292 GCFVRVGIGRSKSGPIYRLCWVKNVDATDPDKTYKLENKTTHKYLNVVWGNETSAARWQM 351
Query: 348 AMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEK 407
AM+SD PLEEE++QW+REVER +GRMP+KQD+ EKKE+IQ+ N+FVYSA TVKQMLQEK
Sbjct: 352 AMISDGHPLEEEYRQWIREVERTNGRMPTKQDISEKKEAIQRTNSFVYSAETVKQMLQEK 411
Query: 408 KSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKRLQELEASRDSKVKDAKAIRLA 467
KSAS RP+NVAAEKDRLR+ELE+AQS++DE +ERIK ++++L+ASR+ K D KA++LA
Sbjct: 412 KSASVRPMNVAAEKDRLRKELEIAQSKNDEAGVERIKSKIKQLDASRNKKGVDKKALKLA 471
Query: 468 EMNRKNRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGD 527
EMN+KNR ENFKNASE+K + SLKAGEAGYDPFSRRWTRS NYY NG
Sbjct: 472 EMNKKNRAENFKNASEVKSITASLKAGEAGYDPFSRRWTRSSNYY------------NGK 519
Query: 528 KNGVPGGANGEE--------GATGEVGMAATEAALEAAAGAGKLVDTNAPLDLGTESNML 579
G G N GA G+ ATEAALEAAA AGKL+DT AP+ G E N L
Sbjct: 520 NKGKDGEENEAAVAAAVETNGADAGAGVEATEAALEAAAEAGKLIDTRAPIGQGAEHNQL 579
Query: 580 HDFELDISLNALKKFGGPQGVLAGFMARKQRIEATVGCQVPENDGRRHALTLTVGDYKRR 639
H+FEL +SL AL+K+GGPQGV FMARKQ EATVGC+V ENDG+RH LTLTV DYKRR
Sbjct: 580 HNFELSLSLTALQKYGGPQGVQKAFMARKQLTEATVGCRVAENDGKRHGLTLTVSDYKRR 639
Query: 640 RGLL 643
RGLL
Sbjct: 640 RGLL 643
>gi|356572305|ref|XP_003554309.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Glycine
max]
Length = 646
Score = 713 bits (1840), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/659 (64%), Positives = 495/659 (75%), Gaps = 29/659 (4%)
Query: 1 MADLENLLLEAAGRTNSAGRNRHSASSSKRRREGSYSGSDSRDDDSDDNRGYGSRKPSGS 60
MADLENLLLEAAGRT RHS +S RR GSDSRDDDS++ Y RK SG
Sbjct: 1 MADLENLLLEAAGRT------RHSRQTS--RRGHGDGGSDSRDDDSENEHDYPGRKASGL 52
Query: 61 QVPLKKRLDPAERDDDQGSQEEGDYD-GGASEHEGDSSNESD---------DDNH--GQM 108
QVP KK DP ERDD + S++EGD D GG S HEGDSS+ESD DD H +M
Sbjct: 53 QVPQKKWFDPMERDDGERSKDEGDDDVGGRSYHEGDSSDESDFGDDLYKNEDDRHKLSEM 112
Query: 109 TELEREMMIFERDDKKVDKNLRDKFRSRREE-RSTRSTKETPPLPSSRSARLAARSADRA 167
TEL+REM++ ER KK DK+L K S+RE+ ++T + K T PL S R +ARSA+R+
Sbjct: 113 TELQREMILSERATKKHDKDLLGKIASKREKGKTTVAGKLTSPLTPSH-VRSSARSANRS 171
Query: 168 AAKDDALNELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSPVKRKAFTPAGLSSSSQSES 227
AKD ALNELRAKRLKQQD EA+RR ASR SG ++SP K + F L SSS SE+
Sbjct: 172 TAKDGALNELRAKRLKQQDSEANRRPSKASRS-SGPGLVSP-KHRPF--PSLGSSSDSET 227
Query: 228 ESRSHSDDEGSTGDGGMADSDDDGAP-GSGRPTYDDIKEITIRRSKLAKWFMEPFFEELI 286
ES+S SD+EGS+ D + DS+DD GS ++ IKEITIRRSKLAKWFMEPFFEELI
Sbjct: 228 ESKSLSDNEGSSDDDRIIDSNDDRIMLGSEGLLFEHIKEITIRRSKLAKWFMEPFFEELI 287
Query: 287 VGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQ 346
GCFVRVGIGRS +GPIY LCMV+NVDAT+ D+ YKLE++TT KYLNV WGNE+SA RWQ
Sbjct: 288 AGCFVRVGIGRSMSGPIYGLCMVKNVDATDCDQQYKLEDKTTHKYLNVVWGNETSATRWQ 347
Query: 347 MAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQE 406
MAMVSDSPP EEEF QW+++VER GRMP+KQ+V EKKE+IQK N FVYSAATVKQMLQE
Sbjct: 348 MAMVSDSPPEEEEFIQWVKDVERRGGRMPTKQEVAEKKEAIQKTNLFVYSAATVKQMLQE 407
Query: 407 KKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKRLQELEASRDSKVKDAKAIRL 466
KKSA +RPLN+AAEKDRLR ELE+A S++++ +++RI RL ELE SR +K DA+A++L
Sbjct: 408 KKSAKTRPLNIAAEKDRLRTELEIAHSKNNKAEVKRIMTRLLELEESRQAKTMDARALKL 467
Query: 467 AEMNRKNRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANG 526
AEMNRKNR ENFKNASELK VN LKAGEAGYDPFSRRWTRS NYY KP EE E N
Sbjct: 468 AEMNRKNRFENFKNASELKPVNKELKAGEAGYDPFSRRWTRSMNYYAGKPAEEAAGEINS 527
Query: 527 DKNGVPGGANGEEGAT--GEVGMAATEAALEAAAGAGKLVDTNAPLDLGTESNMLHDFEL 584
V + GA+ GMAAT AAL+AAAGAGKLVDT+AP+D GTESN LH+F+L
Sbjct: 528 ASGAVADTGSYHTGASETVTAGMAATTAALKAAAGAGKLVDTSAPVDQGTESNSLHNFQL 587
Query: 585 DISLNALKKFGGPQGVLAGFMARKQRIEATVGCQVPENDGRRHALTLTVGDYKRRRGLL 643
ISL L+KFGG +GV AGFMA+KQRIEATVG QV +ND ++HALTLTV DYKRRRGLL
Sbjct: 588 PISLAILQKFGGAKGVQAGFMAKKQRIEATVGFQVLKNDRQKHALTLTVSDYKRRRGLL 646
>gi|356505080|ref|XP_003521320.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Glycine
max]
Length = 644
Score = 691 bits (1782), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/660 (64%), Positives = 492/660 (74%), Gaps = 33/660 (5%)
Query: 1 MADLENLLLEAAGRTNSAGRNRHSASSSKRRREGSYSGSDSRDDDSDDNRGYGSRKPSGS 60
MADLENLLLEAAGRT RHS S+R G GSDSR+DDS+D Y RKPS
Sbjct: 1 MADLENLLLEAAGRT------RHSCQPSRRGHGGG-GGSDSREDDSEDEHDYSGRKPSSL 53
Query: 61 QVPLKKRLDPAERDDDQGSQEEGDYD-GGASEHEGDSSNESD---------DD--NHGQM 108
QVPLKKR DP ERDD + S++EGD D GG HEGDSS+ESD DD N +M
Sbjct: 54 QVPLKKRFDPIERDDGERSKDEGDDDVGGRCCHEGDSSDESDFGDDLYKNEDDRLNLSEM 113
Query: 109 TELEREMMIFERDDKKVDKNLRDKFRSRREE-RSTRSTKETPPLPSSRSARLAARSADRA 167
TEL+REM++ ER KK DK K S+RE+ + T + K+T PLP SR R +ARSADR+
Sbjct: 114 TELQREMILSERATKKHDKYFLGKIASKREKGKKTVAGKQTSPLPPSR-VRSSARSADRS 172
Query: 168 AAKDDALNELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSPVKRKAFTPAGLSSSSQSES 227
AKD ALNELRAKRLKQQD EA+RR +ASR SG SP K K F LSSSS SE+
Sbjct: 173 TAKDGALNELRAKRLKQQDSEANRRPSEASRS-SGPGHFSP-KHKPF--PNLSSSSDSET 228
Query: 228 ESRSHSDDEG-STGDGGMADSDDDGAPGSGRPTYDDIKEITIRRSKLAKWFMEPFFEELI 286
ES+S SD+EG S D + DD GS +++DIKEITIRRSKLAKWFMEPFFEELI
Sbjct: 229 ESKSLSDNEGLSDDDRIIDSDDDRIMLGSEGLSFEDIKEITIRRSKLAKWFMEPFFEELI 288
Query: 287 VGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQ 346
CFVRVGIGR K+GPIYRLCMV+NVDAT+ R YKLEN+TT KYLN+ WGNE+SAARWQ
Sbjct: 289 ADCFVRVGIGRPKSGPIYRLCMVKNVDATDRARQYKLENKTTHKYLNLVWGNETSAARWQ 348
Query: 347 MAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQE 406
MAM+S+SPP EEEF QW++EVER GRMP+KQ+V EKKE+I K N FVYSAATVKQMLQE
Sbjct: 349 MAMISNSPPKEEEFIQWVKEVERRGGRMPTKQEVAEKKEAILKTNLFVYSAATVKQMLQE 408
Query: 407 KKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKRLQELEASRDSKVKDAKAIRL 466
KKSA +RPLN+AAEKDRLR ELE+A S++ + +++RI RL+ELE SR +K DA+A++L
Sbjct: 409 KKSAKTRPLNIAAEKDRLRTELEIAHSKNSKAEVKRIMTRLEELEESRKAKRMDARALKL 468
Query: 467 AEMNRKNRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEAN- 525
AEMNRKNR ENFKNASELK VN LKAGEAGYDPFSRRWTRSRNYY KP EE AE N
Sbjct: 469 AEMNRKNRFENFKNASELKPVNKELKAGEAGYDPFSRRWTRSRNYYSGKPAEEGAAENNS 528
Query: 526 --GDKNGVPGGANGEEGATGEVGMAATEAALEAAAGAGKLVDTNAPLDLGTESNMLHDFE 583
GD GA T G AAT AAL+AAAGAGKLVDT+AP+D TESN+LH+FE
Sbjct: 529 AGGDTGSYHTGA----AETVMAGTAATTAALKAAAGAGKLVDTSAPVDQATESNVLHNFE 584
Query: 584 LDISLNALKKFGGPQGVLAGFMARKQRIEATVGCQVPENDGRRHALTLTVGDYKRRRGLL 643
L ISL L+ FGG +GV AG+MA+KQRIEAT G +V END ++HALTLTV DYKRRRGL+
Sbjct: 585 LPISLATLQNFGGAKGVQAGYMAKKQRIEATAGFKVLENDRQKHALTLTVSDYKRRRGLI 644
>gi|357510279|ref|XP_003625428.1| RNA polymerase-associated protein RTF1-like protein [Medicago
truncatula]
gi|355500443|gb|AES81646.1| RNA polymerase-associated protein RTF1-like protein [Medicago
truncatula]
Length = 624
Score = 661 bits (1706), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/548 (67%), Positives = 437/548 (79%), Gaps = 13/548 (2%)
Query: 98 NESDDDNHGQMTELEREMMIFERDDKKVDKNLRDKFRSRREERSTRSTKETPPLPSSRSA 157
+E D +MTEL+REM++ +R KK DK++ K S+RE + S +ETPPLPSSR
Sbjct: 88 DEDDRKKLSEMTELQREMILSDRAAKKDDKDILSKIASKRE-KGNVSRRETPPLPSSRMM 146
Query: 158 RLAARSADRAAAKDDALNELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSPVKRKAFTPA 217
+ RS DR+AAKD ALNELRAKRLKQ+DPE R L++ S+ +GS VLS + + F+
Sbjct: 147 S-STRSYDRSAAKDGALNELRAKRLKQRDPETQRELKEGSKS-AGSGVLSKIGKPNFS-- 202
Query: 218 GLSSSSQSESESRSHSDDEGSTGDGGMADSDDDGA-PGSGRPTYDDIKEITIRRSKLAKW 276
SS S+SES SRS D EG + G+ DS+DD PG +P+++DI++ITI RSKL KW
Sbjct: 203 -SSSHSESESRSRSDEDVEGLSEGEGIIDSNDDKIMPGFEKPSFEDIQDITIPRSKLTKW 261
Query: 277 FMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTW 336
FMEPFFEELIVGCFVRVGIGRSK GPIYRLCMV+NVDA++PDR YKL+N+TT KYLNV W
Sbjct: 262 FMEPFFEELIVGCFVRVGIGRSKTGPIYRLCMVKNVDASDPDRLYKLDNKTTYKYLNVVW 321
Query: 337 GNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKESIQKINTFVYS 396
GNE+SAARWQMAMVSDSPPLEEEFKQW++EVER+ GRM + DV+EKK+++ KIN FVYS
Sbjct: 322 GNETSAARWQMAMVSDSPPLEEEFKQWVKEVERSGGRMLKRLDVVEKKQAMLKINNFVYS 381
Query: 397 AATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKRLQELEASRDS 456
AATVKQML+EKKS S RPLNVAAEKDRL+RELE+A+S++D +E+I+ +LQELE SR S
Sbjct: 382 AATVKQMLEEKKSISRRPLNVAAEKDRLKRELEIAESKNDAAGVEKIQTKLQELEESRKS 441
Query: 457 KVKDAKAIRLAEMNRKNRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKP 516
+ KDAKA+RL+EMNRKNRVENFKNAS+LK VN +LKAGEAGYDPFSRRWTRSRNYY SKP
Sbjct: 442 REKDAKALRLSEMNRKNRVENFKNASDLKPVNKALKAGEAGYDPFSRRWTRSRNYYNSKP 501
Query: 517 GEEVTAEANGDKNGVPGGANGEEGATGE-VGMAATEAALEAAAGAGKLVDTNAPLDLGTE 575
EE TA N GGA G+ G+ G GMAAT ALEAAAGAGKLVDT AP+D GTE
Sbjct: 502 AEEATA-----GNNTSGGAVGDGGSNGIGAGMAATTEALEAAAGAGKLVDTRAPVDEGTE 556
Query: 576 SNMLHDFELDISLNALKKFGGPQGVLAGFMARKQRIEATVGCQVPENDGRRHALTLTVGD 635
SN+LHDFEL ISL L+KFGG +GV AGFMA+KQRIE VG +VPENDGRRH LTLTV D
Sbjct: 557 SNVLHDFELPISLAMLQKFGGAKGVQAGFMAKKQRIEEVVGFRVPENDGRRHQLTLTVSD 616
Query: 636 YKRRRGLL 643
YKRRRGLL
Sbjct: 617 YKRRRGLL 624
>gi|356505765|ref|XP_003521660.1| PREDICTED: RNA polymerase-associated protein C651.09c-like [Glycine
max]
Length = 664
Score = 603 bits (1555), Expect = e-170, Method: Compositional matrix adjust.
Identities = 370/677 (54%), Positives = 462/677 (68%), Gaps = 47/677 (6%)
Query: 1 MADLENLLLEAAGRTNSAGRNRHSASSSKRRREG------SYSGSDSRDDDSDDNRGYGS 54
MADLEN+LLEAAGRT+S R +SK +REG S GSDSRD++SD+ G
Sbjct: 1 MADLENMLLEAAGRTSSPVSKRPKPKNSKAKREGGAGAAFSDGGSDSRDENSDEGAGKKP 60
Query: 55 RKPSGSQVPLKKRLDPAER---DDDQGSQE------EGDYDGGASEHEGDSSN----ESD 101
++ S S VPLKKRLD +R ++D+G E + D DGG+SE S+ E D
Sbjct: 61 QRYS-SHVPLKKRLDMNKRGNNNNDRGGAELEDGVPDPDRDGGSSEESDVGSDLYKDEDD 119
Query: 102 DDNHGQMTELEREMMIFERDDKKVDKNLRDKFRSRREERSTRSTKE--------TPPLPS 153
MTELEREM++ +R KK +K + K R +RE + + + PS
Sbjct: 120 KQKLANMTELEREMILSDRATKKCEKEFKKKMRVKRENKKANAKTTTTNTTTANSSHHPS 179
Query: 154 SRSARLAARSADRAAAKDDALNELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSPVKRKA 213
S R +AR A+R A+K D L+ELRAKR KQQ E +LR+A GS S K+K
Sbjct: 180 SVKVRSSARHAERTASKGDVLSELRAKRKKQQVLEPRDKLRNALGTGSSS------KQKP 233
Query: 214 FTPAGLSSSSQSESESRSHSDDEGSTGDGGMADSDDDGAPGSGRPTYDDIKEITIRRSKL 273
A SSSSQSES RS S+ + S G DD S PT+++I++ITIRRSKL
Sbjct: 234 GITASPSSSSQSESAFRSDSERDSSDDGGLGDSDDDKSMHESKMPTFENIRDITIRRSKL 293
Query: 274 AKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRSYKLENRTTCKYLN 333
KW EPFF+ELIVGCFVR+GIG+ +N P+YRLC+V+ VD +P++ YK+ENR T KYL
Sbjct: 294 VKWLNEPFFDELIVGCFVRIGIGKLENVPVYRLCIVQRVDGGDPNKHYKVENRVTHKYLV 353
Query: 334 VTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKESIQKINTF 393
WG+++SA ++QMA+VSDS PLE+EF+QW+RE ER +MPSK VLEKKE+I++ + +
Sbjct: 354 CVWGSDNSAKKFQMAVVSDSAPLEKEFRQWVREHERTCSQMPSKMSVLEKKEAIRRTSKY 413
Query: 394 VYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKRLQELEAS 453
VYSAATVKQML+EKKS SRPLNVA EKDRL+ LEVA+S++DE +M+RI K+L ELEAS
Sbjct: 414 VYSAATVKQMLEEKKSVPSRPLNVAVEKDRLKNLLEVAKSKNDEAEMDRILKKLVELEAS 473
Query: 454 RDSKVKDAKAIRLAEMNRKNRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYI 513
R + DAKA+RLAEMNRKNRVENFK SE K+ NT+LKAGE G DPFSRRWTRSRNYY
Sbjct: 474 RRTWENDAKAVRLAEMNRKNRVENFKMLSEQKQFNTNLKAGEEGVDPFSRRWTRSRNYY- 532
Query: 514 SKPGEEVTAEANGDKNGVPGGAN--GEE-----GATGEVGMAATEAALEAAAGAGKLVDT 566
G+E AE N DK G + GE+ G T +VG+ TE AL+AAA AGKL+DT
Sbjct: 533 ---GKE--AEKNEDKREKDGEVSKVGEKEQEKGGVTTKVGVEVTELALQAAANAGKLIDT 587
Query: 567 NAPLDLGTESNMLHDFELDISLNALKKFGGPQGVLAGFMARKQRIEATVGCQVPENDGRR 626
NAP+D GTE +MLHDF+L ISL LK FGGPQG+ GF+ARKQ+IEATVG QV E DG R
Sbjct: 588 NAPVDGGTELHMLHDFDLPISLAELKSFGGPQGLKNGFLARKQKIEATVGLQVSEKDGSR 647
Query: 627 HALTLTVGDYKRRRGLL 643
HALTL++ DYKRRRGLL
Sbjct: 648 HALTLSISDYKRRRGLL 664
>gi|357151448|ref|XP_003575794.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog
[Brachypodium distachyon]
Length = 658
Score = 602 bits (1552), Expect = e-169, Method: Compositional matrix adjust.
Identities = 350/669 (52%), Positives = 451/669 (67%), Gaps = 43/669 (6%)
Query: 3 DLENLLLEAAGRTNSAGRNRHSASSSKR-----RREGSYSGSDSRDDDSDDNRGYG---- 53
+L++LLL+AAGRT G+ S S++R RR G S DD D +
Sbjct: 5 NLDDLLLQAAGRT--VGKGSQSRPSNQRWQQRGRRAGGPYSGGSGSDDGDSDSDAAPSYP 62
Query: 54 -SRKPSGSQVPLKKRLDPAERDDDQGSQEEG------------DYDGGASEHEGDSSNES 100
R+PSGSQVPLKKR + G ++G D D S +E
Sbjct: 63 RKRQPSGSQVPLKKRHQTEKGGGGGGYDDDGDLDDEARRCGGEDSDSAPSVGSDLYKDED 122
Query: 101 DDDNHGQMTELEREMMIFERDDKKVDKNLRDKFRSRREERSTRSTKETPPLPSSRSARLA 160
D + MTEL+REM++ ER + + L+ K T + K++PP P SRS R +
Sbjct: 123 DKEQLENMTELQREMILAERSTRIDEYKLKKKLARTATTSKTEARKDSPPPPLSRS-RSS 181
Query: 161 ARSADRAAAKDDALNELRAKRLKQQDPEAHR-RLRDASRGGSGSRVLSPVKRKAFTPAGL 219
R+ DR+A K AL+ELRAKR++QQDPE +R R +D ++ SP +R+A +P
Sbjct: 182 TRT-DRSATKS-ALDELRAKRMRQQDPEGYRNRFKDLV-----TKTGSPTRRRAGSPP-- 232
Query: 220 SSSSQSESESRSHSDDEGSTGDGGMADSDDDGAPGSGRPT-YDDIKEITIRRSKLAKWFM 278
S ++ ++R +D G D D D+ +P P +DD+K IT+RR+KL KWFM
Sbjct: 233 -SDGSNDGDNRGRMNDHGGIADDAREDEFDE-SPSRLVPLKFDDVKSITLRRTKLVKWFM 290
Query: 279 EPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGN 338
EPFFE+L+ GCFVR+GIG++K+GP YRLC+VRNVDA++PDR YKL++ TTCKYLNV W N
Sbjct: 291 EPFFEDLVSGCFVRIGIGKTKSGPKYRLCIVRNVDASDPDRQYKLDSYTTCKYLNVVWDN 350
Query: 339 ESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKESIQKINTFVYSAA 398
E++AARWQM VSDSP LEEEFK+WL+E E+N R+P++Q+VLEKKE+IQK TFVYSAA
Sbjct: 351 EANAARWQMTQVSDSPVLEEEFKEWLQEAEKNGVRIPTRQEVLEKKEAIQKAYTFVYSAA 410
Query: 399 TVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKRLQELEASRDSKV 458
TVKQML+EKKSA RP+NVAAEKDRLR +LE+A R DEV+ ERI+ RL +L+
Sbjct: 411 TVKQMLREKKSAVRRPMNVAAEKDRLRDQLEMALVRRDEVEAERIRARLNQLQKIAQPMS 470
Query: 459 KDAKAIRLAEMNRKNRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKPGE 518
+ KA +L EMNRKNR ENFK ASE+K VNTSLKAGEAGYDPFSRRWTRSRNYY +KP
Sbjct: 471 NNEKAAKLEEMNRKNRAENFKTASEMKAVNTSLKAGEAGYDPFSRRWTRSRNYYAAKPEG 530
Query: 519 EVTAE----ANGDKNGVPGGANGEEGATGEVGMAATEAALEAAAGAGKLVDTNAPLDLGT 574
E + ANG+ + +GA +VG T +AL AAA AGKLVDTNAPLDLGT
Sbjct: 531 EAEGDNAEAANGNGDSAIASTKDVKGAV-QVGSTVTASALVAAAEAGKLVDTNAPLDLGT 589
Query: 575 ESNMLHDFELDISLNALKKFGGPQGVLAGFMARKQRIEATVGCQVPENDGRRHALTLTVG 634
E+N LH+FEL ISL+ L+++GGP+G+ G+MARKQ+IEAT+G ++P+NDGRRHALTL+V
Sbjct: 590 ETNSLHNFELPISLSVLEEYGGPKGLFEGYMARKQKIEATMGYKIPDNDGRRHALTLSVS 649
Query: 635 DYKRRRGLL 643
DYKRRRGLL
Sbjct: 650 DYKRRRGLL 658
>gi|226509662|ref|NP_001145747.1| uncharacterized protein LOC100279254 [Zea mays]
gi|219884293|gb|ACL52521.1| unknown [Zea mays]
gi|414878213|tpg|DAA55344.1| TPA: hypothetical protein ZEAMMB73_654453 [Zea mays]
Length = 647
Score = 558 bits (1439), Expect = e-156, Method: Compositional matrix adjust.
Identities = 338/661 (51%), Positives = 445/661 (67%), Gaps = 36/661 (5%)
Query: 2 ADLENLLLEAAGRTNSAGRNRHSASSSKRRREGSYSGSDSRDDDSDDNRGYGSRKPSGSQ 61
++L++LLL+AAGRT G+N HS S+ R G DDDSD Y +KPS SQ
Sbjct: 4 SNLDDLLLQAAGRT---GKN-HSRPSNPRWNSGGSGSDGFDDDDSDAAPTYSRKKPS-SQ 58
Query: 62 VPLKKRLDPAERDDDQGS---------QEEGDYDGGASEHEGDS------SNESDDDNHG 106
VPLKKR P E+ +GS E+G GG S +E D +
Sbjct: 59 VPLKKRHQP-EQGGRRGSGGWKDEDDEDEDGRRSGGEDSDSAPSVGSDLYKDEDDKERLE 117
Query: 107 QMTELEREMMIFERDDKKVDKNLRDKFRSRREERSTRSTKETPPLPSSRSARLAARSADR 166
M+EL+REM++ +R + D L+ + R+ + ++ P S ++ AD+
Sbjct: 118 NMSELQREMILADRGTRLDDYKLKQRARASSSKTDKVGARKDSSPPPPPSRMRSSTRADK 177
Query: 167 A-AAKDDALNELRAK-RLKQQDPEAHRRLRDASRGGSGSRVLSPVKRKAFTPAGLSSSSQ 224
+ +A AL+ELRAK R++QQ PEA R R GS P +R+A +P S
Sbjct: 178 SGSAAKSALDELRAKQRMRQQAPEARRFTDLLPRSGS------PTRRRAGSPP---SDGS 228
Query: 225 SESESRSHSDDEGSTGDGGMADSDDDGAPGSGRPT-YDDIKEITIRRSKLAKWFMEPFFE 283
++ + R +D G D D D+ +P P +DD+K IT+RRSKL KWFMEPFF+
Sbjct: 229 NDGDGRGRPNDHGRIADDSRDDEFDE-SPSRLDPLKFDDVKSITLRRSKLVKWFMEPFFD 287
Query: 284 ELIVGCFVRVGIGRSKNG-PIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSA 342
+LI GCFVR+GIG++KNG P YRLC+VRNVDA++PDR+YKLE+ +TCKYLNV W +E++A
Sbjct: 288 DLISGCFVRLGIGQTKNGTPRYRLCIVRNVDASDPDRNYKLESYSTCKYLNVVWDSEANA 347
Query: 343 ARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKESIQKINTFVYSAATVKQ 402
ARWQM VSDSPP EEEFK+WL+E E++ R+P++Q+VL+KKE+IQ+ FVYSAATV+Q
Sbjct: 348 ARWQMTQVSDSPPNEEEFKEWLQEAEKHGARIPTRQEVLDKKEAIQEAYNFVYSAATVQQ 407
Query: 403 MLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKRLQELEASRDSKVKDAK 462
ML+EK SA RP+N+AAEKDRLR ELE+A SR +E + ERI+ +L+ L++ KD K
Sbjct: 408 MLREK-SAVRRPINIAAEKDRLRSELEMALSRRNEAEAERIRVKLKNLQSRPQPVSKDNK 466
Query: 463 AIRLAEMNRKNRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTA 522
A +L MNRKNR +NFKNASELK VNTSLKAGEAGYDPFSRRWTRSRNYY SKPG +
Sbjct: 467 AAKLEAMNRKNRADNFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYASKPGGDNAE 526
Query: 523 EANGDKNGVPGGANGEEGATGEVGMAATEAALEAAAGAGKLVDTNAPLDLGTESNMLHDF 582
E + + +NG+ + + G +AT AA AAA AGKL DTNAP+DLGTESN++H F
Sbjct: 527 ETANKSSSIVEPSNGDIKSKAQTGTSATTAAQVAAADAGKLTDTNAPVDLGTESNVMHTF 586
Query: 583 ELDISLNALKKFGGPQGVLAGFMARKQRIEATVGCQVPENDGRRHALTLTVGDYKRRRGL 642
EL ISL+AL++FGG +G+ G+MAR+Q+IEAT+G +VP+NDGRRHALTL+V DYKRRRGL
Sbjct: 587 ELPISLSALQEFGGAKGLFDGYMARRQKIEATMGYKVPDNDGRRHALTLSVSDYKRRRGL 646
Query: 643 L 643
L
Sbjct: 647 L 647
>gi|125579594|gb|EAZ20740.1| hypothetical protein OsJ_36364 [Oryza sativa Japonica Group]
Length = 653
Score = 555 bits (1431), Expect = e-155, Method: Compositional matrix adjust.
Identities = 324/593 (54%), Positives = 407/593 (68%), Gaps = 27/593 (4%)
Query: 55 RKPSGSQVPLKKRLDPAERDDDQGSQEEGDYDGGASEHEGDSSNESDDDNHGQMTELERE 114
R PSGSQVPLKKR P ++G G D S +E D + +M+EL+RE
Sbjct: 84 RPPSGSQVPLKKRHQP-----EKGGGRGGGGDSAPSVGSDLYKDEDDKEQLEKMSELDRE 138
Query: 115 MMIFERDDKKVDKNLRDKFRSRREERSTRSTKETPPLPSSRSARLAARSADRAAAKDDAL 174
M++ ER + D L+ R+ ++ P S ++ DR+AAK AL
Sbjct: 139 MILAERGARIDDYKLKQLARASSSSSKADKSRRDSSPPPPPSRARSSARTDRSAAKS-AL 197
Query: 175 NELRAKRLKQQDPEAHR-RLRDASRGGSGSRVLSPVKRKAFTPAGLSSSSQSESESRSHS 233
+ELRAKR++QQDPE +R R +D SGS P +R+A +P S ++ ++R
Sbjct: 198 DELRAKRMRQQDPEGYRNRFKDLI-PQSGS----PPRRRAGSPP---SDGSNDGDNRGRI 249
Query: 234 DDEGSTGDGGMADSDDDGAPGSGRPT-YDDIKEITIRRSKLAKWFMEPFFEELIVGCFVR 292
DE D + D +P P +DD+K IT+RRSKL KWFMEPFFE+L+ GCFVR
Sbjct: 250 TDE-------TRDDEFDESPSRLDPLKFDDVKSITLRRSKLVKWFMEPFFEDLVSGCFVR 302
Query: 293 VGIGRSKNG-PIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVS 351
+GIG+SK+G P YRLC+VRNVDA +PDR YKLE TTCKYLNV W NE++AARWQM VS
Sbjct: 303 LGIGKSKSGTPDYRLCIVRNVDANDPDRKYKLEGYTTCKYLNVVWDNEANAARWQMTQVS 362
Query: 352 DSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSAS 411
DS P EEEFK+WL+ E+N R+P++QDVLEKKE+IQ+ FVYSA TV++ML+EKKSA
Sbjct: 363 DSFPSEEEFKKWLQVAEKNGVRVPTRQDVLEKKEAIQQAYNFVYSAHTVQKMLKEKKSAI 422
Query: 412 SRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKRLQELEASRDSKVKDAKAIRLAEMNR 471
RP+NVAAEKDRLR EL++A +R DE + ERI+ +L +L+ + KA +L MN+
Sbjct: 423 RRPINVAAEKDRLRNELDMAIARRDEAEAERIRSKLNQLQKMSKPISNNEKAAKLEAMNK 482
Query: 472 KNRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANG-DKNG 530
KNR ENFKNASE+K VNTSLK GEAGYDPFSRRWTRSRNYY +KP E NG D +
Sbjct: 483 KNRAENFKNASEMKPVNTSLKVGEAGYDPFSRRWTRSRNYYAAKPEGESAEVPNGNDGSA 542
Query: 531 VPGGANGEEGATGEVGMAATEAALEAAAGAGKLVDTNAPLDLGTESNMLHDFELDISLNA 590
V G + + G G G AAT AAL AAA AGKLVDTNAP+DLGTESN+LH+FEL ISL
Sbjct: 543 VAGDEDTKNGPRG--GSAATAAALVAAADAGKLVDTNAPVDLGTESNLLHNFELGISLAG 600
Query: 591 LKKFGGPQGVLAGFMARKQRIEATVGCQVPENDGRRHALTLTVGDYKRRRGLL 643
L++FGGP+G+ G+MARKQ+IEAT+G +VP+NDGRRHALTLTV DYKRRRGLL
Sbjct: 601 LEEFGGPKGLFDGYMARKQKIEATMGYKVPDNDGRRHALTLTVSDYKRRRGLL 653
>gi|326516874|dbj|BAJ96429.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 661
Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust.
Identities = 331/686 (48%), Positives = 427/686 (62%), Gaps = 74/686 (10%)
Query: 3 DLENLLLEAAGRTNSAGRNRHSASSSKRRREGSYSGSDSRDDDSDDNRGYGS-------- 54
+L++LLL+AAGRT G+ S S++R ++ S S +
Sbjct: 5 NLDDLLLQAAGRT--VGKGGQSRQSNQRWQQHGRRAGGSYSGGSASDGSDDGDSDSDVAP 62
Query: 55 -----RKPSGSQVPLKKRLDPAERDDDQGSQEEG-------------DYDGGASEHEGDS 96
R P GSQVPLKKR + G + D D S
Sbjct: 63 SHPRKRLPPGSQVPLKKRHQTEKGGGRGGGGYDDEDPDDDGRRSGGEDSDSAPSVGSDLY 122
Query: 97 SNESDDDNHGQMTELEREMMIFERDDKKVDKNLRDKFRSRREERSTRSTKETPPLPSSRS 156
+E D + MTEL+REM++ ER + D L+ R+ S+++ K P
Sbjct: 123 KDEDDKEQLENMTELQREMILAERSTRIDDYKLKKLARAS----SSKTDKARKDSPPPPP 178
Query: 157 ARL-AARSADRAAAKDDALNELRAKRLKQQDPEAHR-RLRD--ASRGGSGSRVLSPVKRK 212
+RL A+ DR+A K AL+ELRAKR++QQDP+ +R R +D A GGS P +R+
Sbjct: 179 SRLRASARTDRSATKS-ALDELRAKRMRQQDPDGYRNRFKDLIAKSGGS------PNRRR 231
Query: 213 AFTPAGLSSSSQSESESRSHSDDEGSTGDGGMADSDDDGAPGSGRPT-YDDIKEITIRRS 271
A +P S ++ +R +D + D D+ +P P +DD+K IT+RRS
Sbjct: 232 AGSPP---SDGSNDGGNRGRMNDHAGIAEDNRDDEFDE-SPSRLDPLKFDDVKSITLRRS 287
Query: 272 KLAKWFMEPFFEELIVGCFVRVGIGRSKNG-PIYRLCMVRNVDATEPDRSYKLENRTTCK 330
KL KWFMEPFFE+L+ GCFVR+GIG++K+G P YRLC+VRNVDA++PDR YKLE+ TCK
Sbjct: 288 KLVKWFMEPFFEDLVSGCFVRLGIGKTKSGTPKYRLCIVRNVDASDPDRQYKLESYETCK 347
Query: 331 YLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKESIQKI 390
YLNV W NE++AARWQM VSDSP LEEEFK+WL+E E+N R+P++Q+VLEKKE+I +
Sbjct: 348 YLNVVWDNEANAARWQMTQVSDSPVLEEEFKEWLQEAEKNGVRIPTRQEVLEKKEAIIEA 407
Query: 391 NTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKRLQEL 450
+VYSA TV++MLQ KKSA RP+NVAAEKDRLR +LE+A R D+ + ERI+ RL L
Sbjct: 408 YNYVYSADTVQKMLQAKKSAVRRPMNVAAEKDRLRDQLEMALVRRDDAEAERIRARLSHL 467
Query: 451 EASRDSKVKDAKAIRLAEMNRKNRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRN 510
+ + KA +L EMNRKNR ENFKNASE+K VNTSLKAGEAGYDPFSRRWTRSRN
Sbjct: 468 QKIAQPMSTNEKAAKLEEMNRKNRAENFKNASEMKAVNTSLKAGEAGYDPFSRRWTRSRN 527
Query: 511 YYISKP-------------GEEVTAEANGDKNGVPGGANGEEGATGEVGMAATEAALEAA 557
YY +KP + V A K GV VG A T +AL AA
Sbjct: 528 YYAAKPEGEAENAEAANGNSDNVIAVTEAVKGGV------------RVGTAVTTSALVAA 575
Query: 558 AGAGKLVDTNAPLDLGTESNMLHDFELDISLNALKKFGGPQGVLAGFMARKQRIEATVGC 617
A AGKLVDTNAPLDLGTE+N LH+FEL ISL+ L+++GG +G +MARKQ+IEAT+G
Sbjct: 576 AEAGKLVDTNAPLDLGTETNPLHNFELPISLDVLEQYGGSKGQFEAYMARKQKIEATMGY 635
Query: 618 QVPENDGRRHALTLTVGDYKRRRGLL 643
++P+NDGRRHALTL+V DYKRRRGLL
Sbjct: 636 KIPDNDGRRHALTLSVSDYKRRRGLL 661
>gi|293332492|ref|NP_001168711.1| uncharacterized protein LOC100382503 [Zea mays]
gi|223950353|gb|ACN29260.1| unknown [Zea mays]
gi|413916604|gb|AFW56536.1| plus-3 domain-containing protein [Zea mays]
Length = 650
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 345/664 (51%), Positives = 444/664 (66%), Gaps = 39/664 (5%)
Query: 2 ADLENLLLEAAGRTNSAGRNRHSASSSKRRREGSYSGSDSRDDDSDDNRG--YGSRKPSG 59
+DL++LLL+AAGRT G+N+ S+ + GS S DDD D + Y +KPS
Sbjct: 4 SDLDDLLLQAAGRT---GKNQSRPSNPRWNSGGSGSDGFDDDDDDDSDAAPTYSRKKPS- 59
Query: 60 SQVPLKKRLDPAER--------DDDQGSQEEGDYDGGASEHEGDS------SNESDDDNH 105
SQVPLKKR P + +D+ E+G GG S +E D +
Sbjct: 60 SQVPLKKRHKPEKGGRRGGGGWNDEDDEDEDGRRSGGEDSDSAPSVGSDLYKDEDDKERL 119
Query: 106 GQMTELEREMMIFERDDKKVDKNLRDKFR-SRREERSTRSTKETPPLPSSRSARLAARSA 164
M+EL+RE+++ ER + D L+ + R S + + K++ P P R + R+
Sbjct: 120 ENMSELQRELILAERGTRLDDYKLKQRARASSSKTDKVGAPKDSSPPPPPSRMRSSTRTD 179
Query: 165 DRAAAKDDALNELRAK-RLKQQDPEAHRRLRDASRGGSGSRVLSPVKRKAFTPAGLSSSS 223
+A AL+ELRAK R++QQ PEA R GS ++R+A +P S
Sbjct: 180 KSGSAAKSALDELRAKQRMRQQAPEARRITDLLPHSGSS------IRRRAGSPP---SDG 230
Query: 224 QSESESRSHSDDEGST-GDGGMADSDDDGAPGSGRPT-YDDIKEITIRRSKLAKWFMEPF 281
++ +R +D G GDG D + D +P P +DD+K IT+RRSKL KWFMEPF
Sbjct: 231 SNDGNNRGRMNDHGRIAGDG--RDDEFDESPSRLDPLKFDDVKSITLRRSKLVKWFMEPF 288
Query: 282 FEELIVGCFVRVGIGRSKNG-PIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNES 340
F++LI GCFVR+GIG++KNG P YRLC+VRNVDA++PDR+YKLEN +TCKYLNV W +E+
Sbjct: 289 FDDLISGCFVRLGIGKTKNGTPSYRLCIVRNVDASDPDRNYKLENYSTCKYLNVVWDSEA 348
Query: 341 SAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKESIQKINTFVYSAATV 400
+AARWQM VSDSPP EEEFK WL+ E+N R+P++Q+VL+KKE+IQ FVYSAATV
Sbjct: 349 NAARWQMTQVSDSPPNEEEFKDWLQAAEKNGARIPTRQEVLDKKEAIQNAYNFVYSAATV 408
Query: 401 KQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKRLQELEASRDSKVKD 460
+QMLQEK SA RP+N+AAEKDRLR ELE+A SR +E + ERI+ +L+ L+ KD
Sbjct: 409 QQMLQEK-SAVRRPINIAAEKDRLRSELEMALSRRNEHEAERIRTKLKNLQNRAQPVSKD 467
Query: 461 AKAIRLAEMNRKNRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKP-GEE 519
KA +L MNRKNR +NFKNASELK VNTSLKAGEAGYDPFSRRWTRSRNYY SKP G
Sbjct: 468 NKAAKLEAMNRKNRADNFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYASKPGGNN 527
Query: 520 VTAEANGDKNGVPGGANGEEGATGEVGMAATEAALEAAAGAGKLVDTNAPLDLGTESNML 579
V ANG + V +N + + + G AAT AA AAA AGKL+DTNAP+DLGTESNML
Sbjct: 528 VEETANGSSSNV-APSNEDTKSKAQTGTAATTAAQVAAADAGKLIDTNAPVDLGTESNML 586
Query: 580 HDFELDISLNALKKFGGPQGVLAGFMARKQRIEATVGCQVPENDGRRHALTLTVGDYKRR 639
H FEL ISL+AL++FGG +G+ G+MAR+Q+IEAT+G +VP+NDGRRHALTL+V DYKRR
Sbjct: 587 HTFELPISLSALQEFGGAKGLFDGYMARRQKIEATMGYKVPDNDGRRHALTLSVSDYKRR 646
Query: 640 RGLL 643
RGLL
Sbjct: 647 RGLL 650
>gi|115488898|ref|NP_001066936.1| Os12g0535900 [Oryza sativa Japonica Group]
gi|113649443|dbj|BAF29955.1| Os12g0535900, partial [Oryza sativa Japonica Group]
Length = 599
Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust.
Identities = 324/616 (52%), Positives = 406/616 (65%), Gaps = 45/616 (7%)
Query: 55 RKPSGSQVPLKKRLDPAERDDDQGSQEEG-----------------------DYDGGASE 91
R PSGSQVPLKKR P + G D D S
Sbjct: 2 RPPSGSQVPLKKRHQPEKGGGRGGGGGGWKEGDDDDDDDDDDELDEGRRSGDDSDSAPSV 61
Query: 92 HEGDSSNESDDDNHGQMTELEREMMIFERDDKKVDKNLRDKFRSRREERSTRSTKETPPL 151
+E D + +M+EL+REM++ ER + D L+ R+ ++
Sbjct: 62 GSDLYKDEDDKEQLEKMSELDREMILAERGARIDDYKLKQLARASSSSSKADKSRRDSSP 121
Query: 152 PSSRSARLAARSADRAAAKDDALNELRAKRLKQQDPEAHR-RLRDASRGGSGSRVLSPVK 210
P S ++ DR+AAK AL+ELRAKR++QQDPE +R R +D SGS P +
Sbjct: 122 PPPPSRARSSARTDRSAAKS-ALDELRAKRMRQQDPEGYRNRFKDLI-PQSGS----PPR 175
Query: 211 RKAFTPAGLSSSSQSESESRSHSDDEGSTGDGGMADSDDDGAPGSGRPT-YDDIKEITIR 269
R+A +P S ++ ++R DE D + D +P P +DD+K IT+R
Sbjct: 176 RRAGSPP---SDGSNDGDNRGRITDE-------TRDDEFDESPSRLDPLKFDDVKSITLR 225
Query: 270 RSKLAKWFMEPFFEELIVGCFVRVGIGRSKNG-PIYRLCMVRNVDATEPDRSYKLENRTT 328
RSKL KWFMEPFFE+L+ GCFVR+GIG+SK+G P YRLC+VRNVDA +PDR YKLE TT
Sbjct: 226 RSKLVKWFMEPFFEDLVSGCFVRLGIGKSKSGTPDYRLCIVRNVDANDPDRKYKLEGYTT 285
Query: 329 CKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKESIQ 388
CKYLNV W NE++AARWQM VSDS P EEEFK+WL+ E+N R+P++QDVLEKKE+IQ
Sbjct: 286 CKYLNVVWDNEANAARWQMTQVSDSFPSEEEFKKWLQVAEKNGVRVPTRQDVLEKKEAIQ 345
Query: 389 KINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKRLQ 448
+ FVYSA TV++ML+EKKSA RP+NVAAEKDRLR EL++A +R DE + ERI+ +L
Sbjct: 346 QAYNFVYSAHTVQKMLKEKKSAIRRPINVAAEKDRLRNELDMAIARRDEAEAERIRSKLN 405
Query: 449 ELEASRDSKVKDAKAIRLAEMNRKNRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRS 508
+L+ + KA +L MN+KNR ENFKNASE+K VNTSLK GEAGYDPFSRRWTRS
Sbjct: 406 QLQKMSKPISNNEKAAKLEAMNKKNRAENFKNASEMKPVNTSLKVGEAGYDPFSRRWTRS 465
Query: 509 RNYYISKPGEEVTAEANG-DKNGVPGGANGEEGATGEVGMAATEAALEAAAGAGKLVDTN 567
RNYY +KP E NG D + V G + + G G G AAT AAL AAA AGKLVDTN
Sbjct: 466 RNYYAAKPEGESAEVPNGNDGSAVAGDEDTKNGPRG--GSAATAAALVAAADAGKLVDTN 523
Query: 568 APLDLGTESNMLHDFELDISLNALKKFGGPQGVLAGFMARKQRIEATVGCQVPENDGRRH 627
AP+DLGTESN+LH+FEL ISL L++FGGP+G+ G+MARKQ+IEAT+G +VP+NDGRRH
Sbjct: 524 APVDLGTESNLLHNFELGISLAGLEEFGGPKGLFDGYMARKQKIEATMGYKVPDNDGRRH 583
Query: 628 ALTLTVGDYKRRRGLL 643
ALTLTV DYKRRRGLL
Sbjct: 584 ALTLTVSDYKRRRGLL 599
>gi|218187002|gb|EEC69429.1| hypothetical protein OsI_38596 [Oryza sativa Indica Group]
Length = 780
Score = 543 bits (1398), Expect = e-151, Method: Compositional matrix adjust.
Identities = 322/616 (52%), Positives = 404/616 (65%), Gaps = 45/616 (7%)
Query: 55 RKPSGSQVPLKKRLDPAERDDDQGSQEEG-----------------------DYDGGASE 91
R PSGSQVPLKKR P + G D D S
Sbjct: 183 RPPSGSQVPLKKRHQPEKGGGRGGGGGGWKEGDDDDDDDDDDELDEGRRSGDDSDSAPSV 242
Query: 92 HEGDSSNESDDDNHGQMTELEREMMIFERDDKKVDKNLRDKFRSRREERSTRSTKETPPL 151
+E D + +M+EL+REM++ ER + D L+ R+ ++
Sbjct: 243 GSDLYKDEDDKEQLEKMSELDREMILAERGARIDDYKLKQLARASSSSSKADKSRRDSSP 302
Query: 152 PSSRSARLAARSADRAAAKDDALNELRAKRLKQQDPEAHR-RLRDASRGGSGSRVLSPVK 210
P S ++ DR+AAK AL+ELRAKR++QQDPE +R R +D SGS P +
Sbjct: 303 PPPPSRARSSARTDRSAAKS-ALDELRAKRMRQQDPEGYRNRFKDLI-PQSGS----PPR 356
Query: 211 RKAFTPAGLSSSSQSESESRSHSDDEGSTGDGGMADSDDDGAPGSGRPT-YDDIKEITIR 269
R+A +P S ++ ++R DE D + D +P P +DD+K IT+R
Sbjct: 357 RRAGSPP---SDGSNDGDNRGRITDE-------TRDDEFDESPSRLDPLKFDDVKSITLR 406
Query: 270 RSKLAKWFMEPFFEELIVGCFVRVGIGRSKNG-PIYRLCMVRNVDATEPDRSYKLENRTT 328
RSKL KWFMEPFFE+L+ GCFVR+GIG+SK+G P YRLC+VRNVDA +PDR YKLE TT
Sbjct: 407 RSKLVKWFMEPFFEDLVSGCFVRLGIGKSKSGTPDYRLCIVRNVDANDPDRKYKLEGYTT 466
Query: 329 CKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKESIQ 388
CKYLNV W NE++AARWQM VSDS P EEEFK+WL+ E+N R+P++Q+VLEKKE+IQ
Sbjct: 467 CKYLNVVWDNEANAARWQMTQVSDSFPSEEEFKKWLQVAEKNGVRVPTRQEVLEKKEAIQ 526
Query: 389 KINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKRLQ 448
+ FVYSA TV++ML+EKKSA RP+NVAAEKDRLR EL++A +R DE + ERI+ +L
Sbjct: 527 QAYNFVYSARTVQKMLKEKKSAIRRPINVAAEKDRLRNELDMAIARRDEAEAERIRSKLN 586
Query: 449 ELEASRDSKVKDAKAIRLAEMNRKNRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRS 508
+L+ + KA +L MN+KNR ENFKNASE+K VNTSLK GEAGYDPFSRRWTRS
Sbjct: 587 QLQKMSKPISNNEKAAKLEAMNKKNRAENFKNASEMKPVNTSLKVGEAGYDPFSRRWTRS 646
Query: 509 RNYYISKPGEEVTAEANG-DKNGVPGGANGEEGATGEVGMAATEAALEAAAGAGKLVDTN 567
RNYY +KP E NG D + V G + + G G G AAT AAL AAA AGKLVDTN
Sbjct: 647 RNYYAAKPEGESAEVPNGNDGSAVAGDEDTKNGPRG--GSAATAAALVAAADAGKLVDTN 704
Query: 568 APLDLGTESNMLHDFELDISLNALKKFGGPQGVLAGFMARKQRIEATVGCQVPENDGRRH 627
AP+DLGTESN+LH+FEL ISL L++FGGP + G+MARKQ+IEAT+G +VP+NDGRRH
Sbjct: 705 APVDLGTESNLLHNFELGISLAGLEEFGGPMVLFDGYMARKQKIEATMGYKVPDNDGRRH 764
Query: 628 ALTLTVGDYKRRRGLL 643
ALTLTV DYKRRRGLL
Sbjct: 765 ALTLTVSDYKRRRGLL 780
>gi|242083648|ref|XP_002442249.1| hypothetical protein SORBIDRAFT_08g017010 [Sorghum bicolor]
gi|241942942|gb|EES16087.1| hypothetical protein SORBIDRAFT_08g017010 [Sorghum bicolor]
Length = 656
Score = 540 bits (1391), Expect = e-150, Method: Compositional matrix adjust.
Identities = 342/667 (51%), Positives = 440/667 (65%), Gaps = 41/667 (6%)
Query: 2 ADLENLLLEAAGRTNSAGRNRHSASSSKRRREGSYSGSDSRDDDSDDNRGYGSRKPSGSQ 61
++L++LLL+AAGRT G+N+ S+ + GS S D DSD Y +KPS SQ
Sbjct: 6 SNLDDLLLQAAGRT---GKNQSRPSNPRWNSGGSGSDGFDDDSDSDAAPTYSRKKPS-SQ 61
Query: 62 VPLKKRLDPAERDDDQ-----------------GSQEEG-DYDGGASEHEGDSSNESDDD 103
VPLKKR P + G + G D D S +E D +
Sbjct: 62 VPLKKRHQPEKGVRRGGAGGGGGWKDEDDEDEDGRRSGGEDSDSAPSVGSDLYKDEDDKE 121
Query: 104 NHGQMTELEREMMIFERDDKKVDKNLRDKFR---SRREERSTRSTKETPPLPSSRSARLA 160
M+EL+REM++ +R + D L+ + R S+ ++ R K++ P P R +
Sbjct: 122 RLENMSELQREMILADRGTRAADYKLKQRARASLSKTDKLGAR--KDSSPPPPPSRMRSS 179
Query: 161 ARSADRAAAKDDALNELRAKR-LKQQDPEAHRRLRDASRGGSGSRVLSPVKRKAFTPAGL 219
R+ +A AL+ELRAKR ++QQ PEA SGS P +R+A +P
Sbjct: 180 TRTDKSGSAAKSALDELRAKRTMRQQAPEARTSRFTDLLPHSGS----PTRRRAGSPP-- 233
Query: 220 SSSSQSESESRSHSDDEGSTGDGGMADSDDDGAPGSGRPT-YDDIKEITIRRSKLAKWFM 278
S ++ ++R +D G D D D+ +P P +DD+K IT+RRSKL KWFM
Sbjct: 234 -SDGSNDGDNRGRLNDHGRIADDSRDDEFDE-SPSRLDPLKFDDVKSITLRRSKLVKWFM 291
Query: 279 EPFFEELIVGCFVRVGIGRSKNG-PIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWG 337
EPFF++LI GCFVR+GIG++K+G P YRLC+VRNVDA++PDR YKLE+ +T KYLNV WG
Sbjct: 292 EPFFDDLISGCFVRLGIGKTKSGNPRYRLCIVRNVDASDPDRKYKLESYSTYKYLNVVWG 351
Query: 338 NESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKESIQKINTFVYSA 397
+E+ AARWQM VSDSPP EEEFK+WL+E E+N R+P++Q+VLEKKESIQK FVYSA
Sbjct: 352 SEADAARWQMTQVSDSPPNEEEFKEWLQEAEKNGARIPTRQEVLEKKESIQKAYNFVYSA 411
Query: 398 ATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKRLQELEASRDSK 457
TV+QML+EK SA RP+NVAAEKDRLR ELE+A SR +E + ERI+ +L+ L+
Sbjct: 412 VTVQQMLKEK-SAVRRPINVAAEKDRLRSELEMALSRRNEAEAERIRAKLKNLQNRPQQV 470
Query: 458 VKDAKAIRLAEMNRKNRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKPG 517
KD KA +L MNRKNR +NFKNASE+K VNTSLKAGEAGYDPFSRRWTRSRNYY SKPG
Sbjct: 471 SKDDKAAKLEAMNRKNRADNFKNASEMKPVNTSLKAGEAGYDPFSRRWTRSRNYYASKPG 530
Query: 518 EEVTAE-ANGDKNGVPGGANGEEGATGEVGMAATEAALEAAAGAGKLVDTNAPLDLGTES 576
+ E ANG + V N + + + G AAT AA AAA AGKL DTNAP+DLGTES
Sbjct: 531 GDNAEETANGSSSDV-VPINEDIKSKAQTGTAATTAAQVAAADAGKLTDTNAPVDLGTES 589
Query: 577 NMLHDFELDISLNALKKFGGPQGVLAGFMARKQRIEATVGCQVPENDGRRHALTLTVGDY 636
N+LH FEL ISL+AL++FGG +G+ G+MAR+Q+IEAT+G +VP+NDGRRHALTL+V DY
Sbjct: 590 NVLHTFELPISLSALQEFGGAKGLFDGYMARRQKIEATMGYKVPDNDGRRHALTLSVSDY 649
Query: 637 KRRRGLL 643
KRRRGLL
Sbjct: 650 KRRRGLL 656
>gi|77556034|gb|ABA98830.1| Plus-3 domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|77556035|gb|ABA98831.1| Plus-3 domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|215697432|dbj|BAG91426.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 522
Score = 538 bits (1386), Expect = e-150, Method: Compositional matrix adjust.
Identities = 305/540 (56%), Positives = 383/540 (70%), Gaps = 22/540 (4%)
Query: 108 MTELEREMMIFERDDKKVDKNLRDKFRSRREERSTRSTKETPPLPSSRSARLAARSADRA 167
M+EL+REM++ ER + D L+ R+ ++ P S ++ DR+
Sbjct: 1 MSELDREMILAERGARIDDYKLKQLARASSSSSKADKSRRDSSPPPPPSRARSSARTDRS 60
Query: 168 AAKDDALNELRAKRLKQQDPEAHR-RLRDASRGGSGSRVLSPVKRKAFTPAGLSSSSQSE 226
AAK AL+ELRAKR++QQDPE +R R +D SGS P +R+A +P S ++
Sbjct: 61 AAKS-ALDELRAKRMRQQDPEGYRNRFKDLI-PQSGS----PPRRRAGSPP---SDGSND 111
Query: 227 SESRSHSDDEGSTGDGGMADSDDDGAPGSGRPT-YDDIKEITIRRSKLAKWFMEPFFEEL 285
++R DE D + D +P P +DD+K IT+RRSKL KWFMEPFFE+L
Sbjct: 112 GDNRGRITDE-------TRDDEFDESPSRLDPLKFDDVKSITLRRSKLVKWFMEPFFEDL 164
Query: 286 IVGCFVRVGIGRSKNG-PIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAAR 344
+ GCFVR+GIG+SK+G P YRLC+VRNVDA +PDR YKLE TTCKYLNV W NE++AAR
Sbjct: 165 VSGCFVRLGIGKSKSGTPDYRLCIVRNVDANDPDRKYKLEGYTTCKYLNVVWDNEANAAR 224
Query: 345 WQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKESIQKINTFVYSAATVKQML 404
WQM VSDS P EEEFK+WL+ E+N R+P++QDVLEKKE+IQ+ FVYSA TV++ML
Sbjct: 225 WQMTQVSDSFPSEEEFKKWLQVAEKNGVRVPTRQDVLEKKEAIQQAYNFVYSAHTVQKML 284
Query: 405 QEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKRLQELEASRDSKVKDAKAI 464
+EKKSA RP+NVAAEKDRLR EL++A +R DE + ERI+ +L +L+ + KA
Sbjct: 285 KEKKSAIRRPINVAAEKDRLRNELDMAIARRDEAEAERIRSKLNQLQKMSKPISNNEKAA 344
Query: 465 RLAEMNRKNRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEA 524
+L MN+KNR ENFKNASE+K VNTSLK GEAGYDPFSRRWTRSRNYY +KP E
Sbjct: 345 KLEAMNKKNRAENFKNASEMKPVNTSLKVGEAGYDPFSRRWTRSRNYYAAKPEGESAEVP 404
Query: 525 NG-DKNGVPGGANGEEGATGEVGMAATEAALEAAAGAGKLVDTNAPLDLGTESNMLHDFE 583
NG D + V G + + G G G AAT AAL AAA AGKLVDTNAP+DLGTESN+LH+FE
Sbjct: 405 NGNDGSAVAGDEDTKNGPRG--GSAATAAALVAAADAGKLVDTNAPVDLGTESNLLHNFE 462
Query: 584 LDISLNALKKFGGPQGVLAGFMARKQRIEATVGCQVPENDGRRHALTLTVGDYKRRRGLL 643
L ISL L++FGGP+G+ G+MARKQ+IEAT+G +VP+NDGRRHALTLTV DYKRRRGLL
Sbjct: 463 LGISLAGLEEFGGPKGLFDGYMARKQKIEATMGYKVPDNDGRRHALTLTVSDYKRRRGLL 522
>gi|168017180|ref|XP_001761126.1| Paf1 complex protein [Physcomitrella patens subsp. patens]
gi|162687812|gb|EDQ74193.1| Paf1 complex protein [Physcomitrella patens subsp. patens]
Length = 568
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 286/599 (47%), Positives = 373/599 (62%), Gaps = 48/599 (8%)
Query: 62 VPLKKRLDPAERDDDQGSQEEGDYDGGASEHEGDSSNESDDDNHGQMTELEREMMIFERD 121
+PLKKR + D + ++ G+ + +E D N QMTELEREM + +R
Sbjct: 1 MPLKKRFEKDGDDGARDDGYNSEFSYGSDLYR----DEEDRHNLAQMTELEREMELADRS 56
Query: 122 DKKVDKNLRDKFRSRREERSTRSTKETPP---------LPSSRSARLAARSADRAAAKDD 172
+K RD + + R+ R R + + P PSSR R + R R+ K++
Sbjct: 57 EK------RDTWLALRKSRGNRQAEFSTPNHRRERDLGPPSSR-MRSSVREGTRSK-KEN 108
Query: 173 ALNELRAKRLKQQDPEAHRRLRDASRGGSGSR-VLSPVKRKAFTPAGLSSSSQSESESRS 231
ALNEL A+R K QDP + R+ R G + SR SP ++K S S +
Sbjct: 109 ALNELVARRQKAQDPSSLRK-RGRDSGMTPSREAHSPGRKKPSQSMSFSESDPPSEDDGD 167
Query: 232 HSDDEGSTGDGGMADS-DDDGAPGSGRPTYDDIKEITIRRSKLAKWFMEPFFEELIVGCF 290
D+ + GG D +D G P + T D+IK+I IRRSKLAKWFMEPFFEE+IVGCF
Sbjct: 168 SERDDDRSDVGGSGDELEDKGEPEA---TEDEIKDIVIRRSKLAKWFMEPFFEEIIVGCF 224
Query: 291 VRVGIGRSKNG-PIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAM 349
VR+GIG S +G IYR+C V+NVDA +PD+ YK EN T KYLN WG+ES+AARWQM
Sbjct: 225 VRIGIGVSSSGQSIYRVCQVKNVDAKDPDKQYKFENFMTYKYLNCFWGDESTAARWQMVR 284
Query: 350 VSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKS 409
SD P ++E +LR V+ GR P K DVLEKK +I K+N FVYSA+TVKQMLQEKK
Sbjct: 285 ASDQPASQKEISDYLRAVDNAKGRRPLKVDVLEKKAAISKVNQFVYSASTVKQMLQEKKM 344
Query: 410 ASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKRLQELEA-SRDSKVKDAKAIRLAE 468
A+SRP NVA EKDRL +EL +A+S+ + ++E+++ RL+ELE + K KDAKA+ LAE
Sbjct: 345 AASRPANVALEKDRLIKELGIAESKGEHAEVEKLQSRLKELELFANQVKSKDAKAMALAE 404
Query: 469 MNRKNRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDK 528
MNR+N++ENFKNAS LK VNT K G+AGYDPFSRRWTRS+NYY S+P E +K
Sbjct: 405 MNRRNKMENFKNASMLKPVNTFAKEGDAGYDPFSRRWTRSQNYYQSQPKTE-------EK 457
Query: 529 NGVPGGANGEEGATGEVGMAATEAALEAAAGAGKLVDTNAPLDLGTESNMLHDFELDISL 588
V G+N E+GA + G+ A+E + A K V++ A D + LH+F L ISL
Sbjct: 458 ETVE-GSNAEDGAE-KAGIKASEQSEIA-----KHVESQAAAD-RRKLYALHNFVLPISL 509
Query: 589 NALKKFGGPQGV----LAGFMARKQRIEATVGCQVPENDGRRHALTLTVGDYKRRRGLL 643
+ L GP GV + +MARK +EA+ G QV +NDGRRH+LTLTV DYKRRRGLL
Sbjct: 510 SKLGNTKGPGGVHQAFVQAYMARKAHLEASCGVQVEQNDGRRHSLTLTVNDYKRRRGLL 568
>gi|302816571|ref|XP_002989964.1| hypothetical protein SELMODRAFT_130799 [Selaginella moellendorffii]
gi|300142275|gb|EFJ08977.1| hypothetical protein SELMODRAFT_130799 [Selaginella moellendorffii]
Length = 523
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 255/556 (45%), Positives = 344/556 (61%), Gaps = 53/556 (9%)
Query: 108 MTELEREMMIFERDDKKVDKNLRDKFRSRREERSTRSTKETPPLPSSRSARLAARSADRA 167
MTELEREM++ ER +K+ + +L+ +R E + ++ PP SSR R + R +
Sbjct: 1 MTELEREMILHERSEKRDNYSLKKSTEARIAEEERK--RDGPP--SSR-MRSSGRETTKT 55
Query: 168 AAKDDALNELRAKRLKQQDP--------------EAHRRLRDASRGGSGSRVLSPVKRKA 213
+ K +AL+EL AKR + QD R+ R+ GG+ + P R++
Sbjct: 56 S-KTNALSELVAKRQRSQDASQLQQQHQHQHQHQHQQRKRREHVAGGAAA----PPPRRS 110
Query: 214 FTPAGLSSSSQSESESRSHSDDEGSTGDGGMADSDDDGAPGSGRPTYDDIKEITIRRSKL 273
+P+ S + + + S E + D D DD+ P +DI++ITIRRSKL
Sbjct: 111 ASPSSNSDADSEDDDDEESSRGESNRSDVPSEDDDDERGGRVSLPDNEDIRKITIRRSKL 170
Query: 274 AKWFMEPFFEELIVGCFVRVGIGRSKNGP-IYRLCMVRNVDATEPDRSYKLENRTTCKYL 332
+KWFMEPFFEE+IVGCFVR+GIG S +G +YRLC+V+NVDATEPD+ YK ENRTT KYL
Sbjct: 171 SKWFMEPFFEEVIVGCFVRIGIGMSNSGTSMYRLCLVKNVDATEPDKPYKFENRTTHKYL 230
Query: 333 NVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKESIQKINT 392
N TWG++SSAARWQM SD P ++E W EV ++ SK V +K E+++KI +
Sbjct: 231 NCTWGDDSSAARWQMVRASDQAPTDDEIDAWKAEVAKSDSPGISKSAVRDKAEALEKIAS 290
Query: 393 FVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKRLQELEA 452
FVYSAA VKQMLQEKK AS+RP N+A EK+R+ +EL VA+ + D+ +ER+ ++L+ELE+
Sbjct: 291 FVYSAAAVKQMLQEKKMASARPSNLALEKERVMKELSVAEGKGDQEQIERLHEKLKELES 350
Query: 453 -SRDSKVKDAKAIRLAEMNRKNRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNY 511
+ + K+ KA R+ MNR+NR ENFKNASELK + K GEAGYDPFSRRWTRS+NY
Sbjct: 351 LASKQQTKNEKAERIEMMNRRNRFENFKNASELK---PAAKMGEAGYDPFSRRWTRSQNY 407
Query: 512 YIS----KPGEEVTAEANGDKNGVPGGANGEEGATGEVGMAATEAALEAAAGAGKLVDTN 567
Y S EE + GDK G G G E+ AG G+L+
Sbjct: 408 YKSDAPKTAAEEHSEAIGGDKAGKDGA-----GFLQEL----------TKAGNGRLMGRQ 452
Query: 568 APLDLGTESNMLHDFELDISLNALKKFGGPQGVLAGFMARKQRIEATVGCQVPENDGRRH 627
++ LHDF+L ISL AL++F G QG FM RK+++EA G +V ++DGRRH
Sbjct: 453 F-----SKMFSLHDFDLPISLAALERFKGGQGAAMAFMERKRKMEAHYGVRVDDDDGRRH 507
Query: 628 ALTLTVGDYKRRRGLL 643
+LTLTV DYKRRRGLL
Sbjct: 508 SLTLTVNDYKRRRGLL 523
>gi|302770997|ref|XP_002968917.1| hypothetical protein SELMODRAFT_90698 [Selaginella moellendorffii]
gi|300163422|gb|EFJ30033.1| hypothetical protein SELMODRAFT_90698 [Selaginella moellendorffii]
Length = 523
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 253/556 (45%), Positives = 342/556 (61%), Gaps = 53/556 (9%)
Query: 108 MTELEREMMIFERDDKKVDKNLRDKFRSRREERSTRSTKETPPLPSSRSARLAARSADRA 167
MTELEREM++ ER +K+ + +L+ +R E + ++ PP SSR R + R +
Sbjct: 1 MTELEREMILHERSEKRDNYSLKKSTEARIAEEERK--RDGPP--SSR-MRSSGRETTKT 55
Query: 168 AAKDDALNELRAKRLKQQDP--------------EAHRRLRDASRGGSGSRVLSPVKRKA 213
+ K +AL+EL AKR + QD R+ R+ GG+ + P R++
Sbjct: 56 S-KTNALSELVAKRQRSQDASQLQQQQQHQHQHQHQQRKRRENVAGGAAA----PPPRRS 110
Query: 214 FTPAGLSSSSQSESESRSHSDDEGSTGDGGMADSDDDGAPGSGRPTYDDIKEITIRRSKL 273
+P+ S + + + S E + D D DD+ P +DI++ITIRRSKL
Sbjct: 111 ASPSSNSDADSEDDDDEESSRGESNRSDVPSDDDDDERGGRVSLPDNEDIRKITIRRSKL 170
Query: 274 AKWFMEPFFEELIVGCFVRVGIGRSKNGP-IYRLCMVRNVDATEPDRSYKLENRTTCKYL 332
+KWFMEPFFEE+IVGCFVR+GIG S +G +YRLC+V+NVDATEPD+ YK ENRTT KYL
Sbjct: 171 SKWFMEPFFEEVIVGCFVRIGIGMSNSGTSMYRLCLVKNVDATEPDKPYKFENRTTHKYL 230
Query: 333 NVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKESIQKINT 392
N TWG++SSAARWQM SD P ++E W EV ++ SK V +K E+++KI +
Sbjct: 231 NCTWGDDSSAARWQMVRASDQAPTDDEIDAWKAEVAKSDSPGISKSAVRDKAEALEKIAS 290
Query: 393 FVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKRLQELEA 452
FVYSAA VKQMLQEKK AS+RP N+A EK+R+ ++L VA+ + D+ +ER+ ++L+ELE+
Sbjct: 291 FVYSAAAVKQMLQEKKMASARPSNLALEKERVMKDLSVAEGKGDQEQIERLHEKLKELES 350
Query: 453 -SRDSKVKDAKAIRLAEMNRKNRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNY 511
+ + K+ KA R+ MNR+NR ENFKNASELK + K GEAGYDPFSRRWTRS+NY
Sbjct: 351 LASKQQTKNEKAERIEMMNRRNRFENFKNASELK---PAAKMGEAGYDPFSRRWTRSQNY 407
Query: 512 YIS----KPGEEVTAEANGDKNGVPGGANGEEGATGEVGMAATEAALEAAAGAGKLVDTN 567
Y S EE + GDK G G +E AG G+L+
Sbjct: 408 YKSDAPKTAAEEHSEAIGGDKAGKDGAGFLQELTK---------------AGNGRLMGRQ 452
Query: 568 APLDLGTESNMLHDFELDISLNALKKFGGPQGVLAGFMARKQRIEATVGCQVPENDGRRH 627
++ LHDF+L ISL AL++F G QG FM RK+++EA G +V +DGRRH
Sbjct: 453 F-----SKMFSLHDFDLPISLAALERFKGGQGAAMAFMERKRKMEAHYGVRVDADDGRRH 507
Query: 628 ALTLTVGDYKRRRGLL 643
+LTLTV DYKRRRGLL
Sbjct: 508 SLTLTVNDYKRRRGLL 523
>gi|359496599|ref|XP_003635274.1| PREDICTED: uncharacterized protein LOC100854406 [Vitis vinifera]
Length = 493
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/255 (79%), Positives = 219/255 (85%), Gaps = 4/255 (1%)
Query: 393 FVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKRLQELEA 452
FVYSAAT KQMLQEKKS SSRPLN+ AEKDRLRRE+EVA S+HD+ ++ERI RLQ+LEA
Sbjct: 239 FVYSAATGKQMLQEKKSVSSRPLNIVAEKDRLRREMEVALSKHDQAEVERINTRLQQLEA 298
Query: 453 SRDSKVKDAKAIRLAEMNRKNRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYY 512
SR SK KDAKAIRLAEMNRKNR ENFKNASE KRVNTSLKAGEAGYDPFSRRWTRSRNYY
Sbjct: 299 SRRSKEKDAKAIRLAEMNRKNRAENFKNASESKRVNTSLKAGEAGYDPFSRRWTRSRNYY 358
Query: 513 ISKP--GEEVTAEANGDKNG--VPGGANGEEGATGEVGMAATEAALEAAAGAGKLVDTNA 568
+SKP G+E A ANG+ V G+NG G EVG+AAT AALEAAA AGKLVDT+A
Sbjct: 359 VSKPGGGDEAAAVANGEAPAAFVGAGSNGTGGKGAEVGVAATAAALEAAADAGKLVDTSA 418
Query: 569 PLDLGTESNMLHDFELDISLNALKKFGGPQGVLAGFMARKQRIEATVGCQVPENDGRRHA 628
P+D GTESN LHDFEL ISL L+KFGGPQG LAGFMARKQRIEATVGC+VPENDGRRHA
Sbjct: 419 PVDQGTESNTLHDFELPISLAGLQKFGGPQGALAGFMARKQRIEATVGCRVPENDGRRHA 478
Query: 629 LTLTVGDYKRRRGLL 643
LTLTVGDYKRRRGLL
Sbjct: 479 LTLTVGDYKRRRGLL 493
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 148/228 (64%), Positives = 165/228 (72%), Gaps = 11/228 (4%)
Query: 1 MADLENLLLEAAGRTNSAGRNRHSASSSKRRREGSYSGSDSRDDDSDDN--RGYGSRKPS 58
MADLENLLLEAAGRT +AGRNRHS S+RRREGSYS S D D + RGY SRKPS
Sbjct: 1 MADLENLLLEAAGRTGTAGRNRHSLPPSRRRREGSYSDDGSDSKDDDSDEDRGYSSRKPS 60
Query: 59 GSQVPLKKRLDPAERDDDQGSQEEGDYDGGASEHEGDSS---------NESDDDNHGQMT 109
GSQVPLKKRLDP ERDDD GS EEGD DG E + NE D Q+T
Sbjct: 61 GSQVPLKKRLDPTERDDDHGSPEEGDDDGSDHEGDSSDDSDVGSDLYKNEDDRQQLAQLT 120
Query: 110 ELEREMMIFERDDKKVDKNLRDKFRSRREERSTRSTKETPPLPSSRSARLAARSADRAAA 169
ELEREM++ +R KK DK L +K RS+R + T+S KE+PPL SR R +ARSADRAAA
Sbjct: 121 ELEREMILTDRATKKTDKKLHEKLRSKRGKEKTQSRKESPPLQLSRGVRSSARSADRAAA 180
Query: 170 KDDALNELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSPVKRKAFTPA 217
KDDALNELRAKRLK QDPEAHR+LRDASRGGS +R SPVKR+AFT A
Sbjct: 181 KDDALNELRAKRLKHQDPEAHRKLRDASRGGSSNRGFSPVKRRAFTAA 228
>gi|297742903|emb|CBI35694.3| unnamed protein product [Vitis vinifera]
Length = 205
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 174/231 (75%), Positives = 187/231 (80%), Gaps = 26/231 (11%)
Query: 403 MLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKRLQELEASRDSKVKDAK 462
MLQEKKS SSRPLN+ AEKDRLRRE+EVA S+HD+ ++ERI RLQ+LEASR SK KDAK
Sbjct: 1 MLQEKKSVSSRPLNIVAEKDRLRREMEVALSKHDQAEVERINTRLQQLEASRRSKEKDAK 60
Query: 463 AIRLAEMNRKNRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTA 522
AIRLAEMNRKNR ENFKNASE KRVNTSLKAGEAGYDPFSRRWTRSRNYY+SKP
Sbjct: 61 AIRLAEMNRKNRAENFKNASESKRVNTSLKAGEAGYDPFSRRWTRSRNYYVSKP------ 114
Query: 523 EANGDKNGVPGGANGEEGATGEVGMAATEAALEAAAGAGKLVDTNAPLDLGTESNMLHDF 582
GEVG+AAT AALEAAA AGKLVDT+AP+D GTESN LHDF
Sbjct: 115 --------------------GEVGVAATAAALEAAADAGKLVDTSAPVDQGTESNTLHDF 154
Query: 583 ELDISLNALKKFGGPQGVLAGFMARKQRIEATVGCQVPENDGRRHALTLTV 633
EL ISL L+KFGGPQG LAGFMARKQRIEATVGC+VPENDGRRHALTLTV
Sbjct: 155 ELPISLAGLQKFGGPQGALAGFMARKQRIEATVGCRVPENDGRRHALTLTV 205
>gi|414587931|tpg|DAA38502.1| TPA: hypothetical protein ZEAMMB73_696161 [Zea mays]
Length = 383
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 131/277 (47%), Positives = 170/277 (61%), Gaps = 46/277 (16%)
Query: 244 MADSDDDGAPGSGR--PT-YDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKN 300
+A DD+ S R P +DD K IT+RRSKL KWFMEPFF++LI CF+ +GIG+++
Sbjct: 149 LAWKDDEFDESSSRLDPLKFDDRKSITLRRSKLVKWFMEPFFDDLIFECFMWLGIGKTEY 208
Query: 301 GPI-YRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEE 359
G + YR+C+ VSDSPP EEE
Sbjct: 209 GTLSYRMCI-----------------------------------------VSDSPPKEEE 227
Query: 360 FKQWLREVERNSGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAA 419
F +WL++ +RN +P++Q+VL KKE+IQ+ F YSAATV+QML++K S P+N+ A
Sbjct: 228 FMEWLQKEDRNGACIPTQQEVLGKKEAIQEAYNFEYSAATVQQMLRDK-SVVRHPINIVA 286
Query: 420 EKDRLRRELEVAQSRHDEVDMERIKKRLQELEASRDSKVKDAKAIRLAEMNRKNRVENFK 479
EKDRLR EL +A SR +E ER++ + + L+ + KD K L MN KNR +NFK
Sbjct: 287 EKDRLRSELSMALSRRNEAKAERMRVKQKNLQRRPQPESKDNKVANLESMNWKNRADNFK 346
Query: 480 NASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKP 516
NA ELK VN SLKAGE+GYDPF RRWTRSRNYY SKP
Sbjct: 347 NALELKLVNISLKAGESGYDPFLRRWTRSRNYYASKP 383
>gi|258598732|gb|ACV83438.1| plus-3 domain-containing protein [Zea mays]
Length = 187
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 127/186 (68%), Positives = 148/186 (79%), Gaps = 2/186 (1%)
Query: 459 KDAKAIRLAEMNRKNRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKP-G 517
KD KA +L MNRKNR +NFKNASELK VNTSLKAGEAGYDPFSRRWTRSRNYY SKP G
Sbjct: 3 KDNKAAKLEAMNRKNRADNFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYASKPGG 62
Query: 518 EEVTAEANGDKNGVPGGANGEEGATGEVGMAATEAALEAAAGAGKLVDTNAPLDLGTESN 577
V ANG + V +N + + + G AAT AA AAA AGKL+DTNAP+DLGTESN
Sbjct: 63 NNVEETANGSSSNV-APSNEDTKSKAQTGTAATTAAQVAAADAGKLIDTNAPVDLGTESN 121
Query: 578 MLHDFELDISLNALKKFGGPQGVLAGFMARKQRIEATVGCQVPENDGRRHALTLTVGDYK 637
MLH FEL ISL+AL++FGG +G+ G+MAR+Q+IEAT+G +VP+NDGRRHALTL+V DYK
Sbjct: 122 MLHTFELPISLSALQEFGGAKGLFDGYMARRQKIEATMGYKVPDNDGRRHALTLSVSDYK 181
Query: 638 RRRGLL 643
RRGLL
Sbjct: 182 GRRGLL 187
>gi|71534934|gb|AAZ32871.1| unknown [Medicago sativa]
Length = 171
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 121/176 (68%), Positives = 139/176 (78%), Gaps = 6/176 (3%)
Query: 404 LQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKRLQELEASRDSKVKDAKA 463
L+EKKS S RPLNVAAEKDRL+RELE+A+S++D +E+I+ +LQELE SR S+ KDAKA
Sbjct: 1 LEEKKSISRRPLNVAAEKDRLKRELEIAESKNDAAGVEKIQTKLQELEESRKSREKDAKA 60
Query: 464 IRLAEMNRKNRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAE 523
+RL+EMNRKNR ENFKNAS+LK VN +LKAGEAGYDPFSRRWTRSRNYY SKP EE A
Sbjct: 61 LRLSEMNRKNRFENFKNASDLKPVNKALKAGEAGYDPFSRRWTRSRNYYNSKPAEEAAA- 119
Query: 524 ANGDKNGVPGGANGEEGATG-EVGMAATEAALEAAAGAGKLVDTNAPLDLGTESNM 578
N GGA G+ G G GM AT ALEAAAGAGKLVDT AP+D GTESN+
Sbjct: 120 ----GNNTSGGAVGDGGCNGIGAGMTATAEALEAAAGAGKLVDTRAPVDEGTESNV 171
>gi|414886942|tpg|DAA62956.1| TPA: hypothetical protein ZEAMMB73_469884 [Zea mays]
Length = 969
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 118/248 (47%), Positives = 145/248 (58%), Gaps = 48/248 (19%)
Query: 393 FVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKRLQELEA 452
FVYSAATV+QML+E+ S RP+N+AAEKDRLR EL +A SR +E RI+ +L+ L++
Sbjct: 741 FVYSAATVQQMLRER-SVVRRPINIAAEKDRLRSELSMALSRRNEAAAARIRAKLKNLQS 799
Query: 453 SRDSKVKDAKAIRLAEMNRKNRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYY 512
K KA L MN K R++NFKNAS+LK VN SLKAGE+GYDPFSR WTRSRNYY
Sbjct: 800 RPQLMSKVNKAANLETMNWKKRLDNFKNASKLKPVNISLKAGESGYDPFSRMWTRSRNYY 859
Query: 513 ISKPGEEVTAEANGDKNGVPGGANGEEGATGEVGMAATEAALEAAAGAGKLVDTNAPLDL 572
SK PGG N EE TN +
Sbjct: 860 ASK----------------PGGDNVEE-------------------------TTNKSSSI 878
Query: 573 GTESNMLHDFELDISLNALKKFGGPQGVLAGFMARKQRIEATVGCQVPENDGRRHALTLT 632
SN DI A +FGG +G+ G+MAR+Q+IEAT G + +NDG+RHALTL+
Sbjct: 879 VEPSNE------DIKSKAQTEFGGAEGLFNGYMARRQKIEATTGYKGSDNDGKRHALTLS 932
Query: 633 VGDYKRRR 640
V DYKRRR
Sbjct: 933 VSDYKRRR 940
>gi|196014663|ref|XP_002117190.1| hypothetical protein TRIADDRAFT_61226 [Trichoplax adhaerens]
gi|190580155|gb|EDV20240.1| hypothetical protein TRIADDRAFT_61226 [Trichoplax adhaerens]
Length = 517
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 151/560 (26%), Positives = 250/560 (44%), Gaps = 66/560 (11%)
Query: 106 GQMTELEREMMIFERDDKKVDKNLRDKFRSRREERSTRSTKETPPLPSSRSARLAARSAD 165
++TE ERE +F R +K RE TR T E + + R ++
Sbjct: 2 AKLTEKEREQELFNRVEK-------------REALKTRYTIEMKLRKARKDERKKKKNIL 48
Query: 166 RAAAKD--DALNELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSPVKRKAFTPAGLSSSS 223
A+A D D ++ KR K+ + RR + S+ + +R T +
Sbjct: 49 AASALDRQDRRRAMKRKRDKELEKIRSRREKRISKKPAEPTTFMQSRRHLTTSDVFTDDD 108
Query: 224 QSESESRSHSD-DEGSTGDGGMADSDDDGAPGSGRPTY----DDIKEITIRRSKLAKWFM 278
+ S SD D G + D +P S TY + I + RSKL +W
Sbjct: 109 DDDIRGTSKSDTDNFKDGYSPIRHYD---SPQSEIVTYITTRAQLSTIRLSRSKLERWVH 165
Query: 279 EPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGN 338
PFF E +VGCFVRVGIG + IYR+ + +D E R Y L +T K L++ G
Sbjct: 166 MPFFAETVVGCFVRVGIGSHEGKQIYRVAEI--IDVIESGRVYNLNKTSTNKVLHLRHGL 223
Query: 339 ESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKESIQKINTFVYSAA 398
+ R M VS+S + EF +W +++ +PS+ DV +KKE I + + + A
Sbjct: 224 DEQNFR--MEYVSNSNFTDNEFLKWKTKMKELDLNLPSQDDVDKKKEDIIRAANYNFDDA 281
Query: 399 TVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKRLQELE--ASRDS 456
+ +++ EK P N A ++ +L + +E AQ R DE ++ RIK ++ L+ A + S
Sbjct: 282 DIDEIIAEKDKFRKNPSNFAVKQSKLEQAMEAAQYRGDEDEVNRIKSEIENLDKKAEQIS 341
Query: 457 KVKDAKAIRLAEMNRKNRVENFKNASEL-KRVNTSLKAGEAGYDPFSRRWTR-------- 507
K + + + +N++NR KN +E+ K + + + DPF+RR +
Sbjct: 342 KWRSQRLDPIMSINQRNRQ---KNLAEIEKALAREVASDGVCADPFTRRKCQPILVSMVK 398
Query: 508 -SRNYYISKPGEEVTAEANG-DKNGVPGGANGEEGATGEVGMAA--TEAALEAAAGAGKL 563
+N Y S P T +N K+ + +N E + G+ +AA + + + KL
Sbjct: 399 DVQNVYTSSP----TKSSNKLPKSNLMENSNMSESSIGQTPIAAELNNISSQDLGASPKL 454
Query: 564 VDTNAPLDLGTESNMLHDFELDISLNALKKFGGPQGVLAGFMARKQRIEATVGCQVPEND 623
++L + HDF++ I ++ G P ++ + RKQ T +
Sbjct: 455 EGQKEVVNLFSA----HDFDVKIDIDV----GPPAPGIS--IPRKQ----TDNKAANQGT 500
Query: 624 GRRHALTLTVGDYKRRRGLL 643
RR L + DYK+R+GL+
Sbjct: 501 SRR---CLNLSDYKKRKGLI 517
>gi|384252408|gb|EIE25884.1| hypothetical protein COCSUDRAFT_64884 [Coccomyxa subellipsoidea
C-169]
Length = 633
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 115/392 (29%), Positives = 188/392 (47%), Gaps = 48/392 (12%)
Query: 266 ITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATE------PDR 319
+ +RRS L KW EPF E+ +VGC VRV + + Y L V V E P
Sbjct: 276 MQVRRSLLEKWLNEPFLEKTVVGCLVRVSMRGA-----YILAEVIGVVEREAGTYKDPQF 330
Query: 320 SYKL-----ENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRM 374
++K E + T K+L + G +S +A+VS+ E+E+++W + E+++
Sbjct: 331 AFKSPYKTPEGKLTNKWLLMQHG--TSQRYMPIALVSNKKFTEDEWRKWHTQCEKDNRPQ 388
Query: 375 PSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSR 434
S DV ++ T+ Y+A V++M++EK++ + N A EK RL R + A +
Sbjct: 389 LSTGDVQSAVARFKQALTYTYTAEDVQRMIEEKRARGTFGRNSAVEKARLERLRDAAMDQ 448
Query: 435 HDEVDMERIKKRLQELEASRDSKVKDAKAIRLAEMNRKNRVENFKNASELKRVNT---SL 491
D + +R+ ++ ELEA+ + + + + +A +NR+N NF+NA K V
Sbjct: 449 EDLEEAQRLSDQIAELEAAAAERAAERRNVGMASVNRRNTNRNFENA--FKNVGARPEGA 506
Query: 492 KAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANGEEGATGEVGMAATE 551
+ + G DPFSRR TR NY+ +K + T NG+ +G+ A GA GE G T
Sbjct: 507 RLADDGTDPFSRRKTRPMNYWSTKRKQATT---NGEVDGL-SVATSSHGADGEDGEPETP 562
Query: 552 AALEAAAGAGKLVDTNAPLDLGTESNMLHDFELDISLNALKKFGGPQGVLAGFMARKQRI 611
AA TE N D +++I L+ LK + + + + +I
Sbjct: 563 AA------------------RATE-NEQGDLDVNIDLSVLKLASHRKSMASQLLGPNWQI 603
Query: 612 EATVGCQVPENDGRRHALTLTVGDYKRRRGLL 643
+ + P + R LTL DYKRR+G++
Sbjct: 604 SSCAHSKQPPDLAARKMLTL--ADYKRRQGII 633
>gi|321470499|gb|EFX81475.1| hypothetical protein DAPPUDRAFT_303485 [Daphnia pulex]
Length = 722
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 114/396 (28%), Positives = 177/396 (44%), Gaps = 45/396 (11%)
Query: 258 PTYDDIKE----ITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVD 313
P + + KE I + R +L KW PF + IVGCFVRVGIG + +YR+ + +D
Sbjct: 362 PVFVESKEQLGRIRLSRHRLEKWVHAPFLKRAIVGCFVRVGIGMNNGRSVYRIAEI--ID 419
Query: 314 ATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGR 373
E + Y+L + T K + + G + R + VS+ + EFK+WL +
Sbjct: 420 VCETGKIYQLGSTKTNKGIRLKHGAQERVFR--IEFVSNQDFSDSEFKKWLDDCNVQGTS 477
Query: 374 MPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQS 433
P+ +D+ +K + I++ F ++ + QML+EK P N A K++L +E +VA
Sbjct: 478 PPTLEDIEKKLKDIKEAANFEFNEEDINQMLEEKGRFRKTPYNYAMRKNQLMKERDVALL 537
Query: 434 RHDEVDMERIKKRLQELEASRDSKVKDAKAIRLAE---MNRKNRVENFKNASELKRVNTS 490
+ +E + ERI K L ELE D K + + L+ +N +NR N + A E
Sbjct: 538 KGEEEETERITKELAELEERADELSKRSLSTTLSSISFINERNRKRNVERAEEAILEEIR 597
Query: 491 LKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANGEEGATGEVGMAAT 550
G+ DPF+RR TR PG+ N D G+P G + +AT
Sbjct: 598 ASGGQKTEDPFTRRSTR--------PGKSGGYRPNAD--GIPPGPDPLAPVIKTESQSAT 647
Query: 551 ---EAALEAAAGAGKLVDTNAPLDLGTESNMLHDFELDISLNALKKFGGPQGVLAGFMAR 607
E ++ A KLV DL + HDF++ I L +
Sbjct: 648 ANNEGRTDSKDKA-KLVAKPKTSDLFS----AHDFDIKIDLEV--------------PLQ 688
Query: 608 KQRIEATVGCQVPENDGRRHALTLTVGDYKRRRGLL 643
Q + T + R +L L DYK++RGL+
Sbjct: 689 SQPVAVTPKPVANLKEAPRRSLNLE--DYKKKRGLI 722
>gi|189235165|ref|XP_968097.2| PREDICTED: similar to Rtf1 CG10955-PA [Tribolium castaneum]
Length = 650
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/390 (25%), Positives = 175/390 (44%), Gaps = 51/390 (13%)
Query: 258 PTYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEP 317
PT D+ I + R KL ++ PFF+ ++ GC+V++GIG+ N P+YR+ V NV E
Sbjct: 308 PTKLDMNNIRLSRHKLERFVHMPFFDRIVKGCYVKIGIGQHNNMPVYRVAEVTNV--YET 365
Query: 318 DRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSK 377
+ Y L N T K L V GN+ +++ VS+ E E+ +W+ S +P+K
Sbjct: 366 AKIYNLGNTRTNKGLRVRHGNQERV--FRLEFVSNQEFTETEYHKWIEASTAASNPLPTK 423
Query: 378 QDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDE 437
+ + +K+ I++ + ++ ++++++EK+ P N A K +L +E + A +R E
Sbjct: 424 EHIEQKQADIKEALNYEFNEQDIERIIREKERFKPNPHNYAMRKTQLMKERDSALARGAE 483
Query: 438 VDMERIKKRLQELE--ASRDSKVKDAKAIRLAEMNRKNRVENFKNASELKRVNTSLKAGE 495
+ +R+ +LE AS K++ + ++ +N +NR N + A + G+
Sbjct: 484 DLARELTQRISDLEERASELDKMRTSTISSISYINDRNRKRNVEEAEKAIMAEVKANKGK 543
Query: 496 AGYDPFSRRWTRSRNYYISKPGE--EVTAEANGDKNGVPGGANGEEGATGEVGMAATEAA 553
DPF+RR T+ R + + P E EV E +K V E T+
Sbjct: 544 KIDDPFTRRSTKPRMNFKAAPEEKAEVVVEKKPEKVAV----EVENPKVAAQPAQVTQDD 599
Query: 554 LEAAAGAGKLVDTNAPLDLGTESNMLHDFELDISLNALKKFGGPQGVLAGFMARKQRIEA 613
L +A +D + PL + S+N P+ V R+
Sbjct: 600 LFSAHDFDIKIDLDVPLPVA-------------SVNV-----TPKTVTKDLAPRR----- 636
Query: 614 TVGCQVPENDGRRHALTLTVGDYKRRRGLL 643
+L + DYK++RGL+
Sbjct: 637 ----------------SLNLQDYKKKRGLI 650
>gi|270003139|gb|EEZ99586.1| hypothetical protein TcasGA2_TC001573 [Tribolium castaneum]
Length = 649
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 143/278 (51%), Gaps = 8/278 (2%)
Query: 258 PTYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEP 317
PT D+ I + R KL ++ PFF+ ++ GC+V++GIG+ N P+YR+ V NV E
Sbjct: 308 PTKLDMNNIRLSRHKLERFVHMPFFDRIVKGCYVKIGIGQHNNMPVYRVAEVTNV--YET 365
Query: 318 DRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSK 377
+ Y L N T K L V GN+ +++ VS+ E E+ +W+ S +P+K
Sbjct: 366 AKIYNLGNTRTNKGLRVRHGNQERV--FRLEFVSNQEFTETEYHKWIEASTAASNPLPTK 423
Query: 378 QDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDE 437
+ + +K+ I++ + ++ ++++++EK+ P N A K +L +E + A +R E
Sbjct: 424 EHIEQKQADIKEALNYEFNEQDIERIIREKERFKPNPHNYAMRKTQLMKERDSALARGAE 483
Query: 438 VDMERIKKRLQELE--ASRDSKVKDAKAIRLAEMNRKNRVENFKNASELKRVNTSLKAGE 495
+ +R+ +LE AS K++ + ++ +N +NR N + A + G+
Sbjct: 484 DLARELTQRISDLEERASELDKMRTSTISSISYINDRNRKRNVEEAEKAIMAEVKANKGK 543
Query: 496 AGYDPFSRRWTRSRNYYISKPGE--EVTAEANGDKNGV 531
DPF+RR T+ R + + P E EV E +K V
Sbjct: 544 KIDDPFTRRSTKPRMNFKAAPEEKAEVVVEKKPEKVAV 581
>gi|307205224|gb|EFN83614.1| RNA polymerase-associated protein Rtf1 [Harpegnathos saltator]
Length = 694
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 109/394 (27%), Positives = 177/394 (44%), Gaps = 53/394 (13%)
Query: 259 TYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPD 318
T +D+ +I + R K+ ++ PFF+ ++ GCFVR+GIG + P+YR+ + V E
Sbjct: 345 TKEDLNKIRLSRHKMERFVHLPFFDRVVQGCFVRIGIGNNNGKPVYRVAEISGV--CETG 402
Query: 319 RSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQ 378
+ Y+L T K L + G + R + VS+ + EF +W MP+
Sbjct: 403 KIYQLGGTRTNKGLKLRHGAQERVFR--LEFVSNQEFTDSEFFKWKETCALQGISMPTFD 460
Query: 379 DVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEV 438
+V +K + I++ + + ++++++EK+ P N A +K +L RE + A R D+
Sbjct: 461 EVEQKLKDIKEALVYEFKEEDIEKIVREKERFKQTPYNYAMKKAQLMRERDAANCRGDDE 520
Query: 439 DMERIKKRLQELE--ASRDSKVKDAKAIRLAEMNRKNRVENFKNASELKRVNTSLKA--G 494
R+ + L ELE AS K++ A ++ +N +NR N + A K + LKA G
Sbjct: 521 TASRLNQELSELEERASELDKMRTASISSISYINDRNRKRNVEEAE--KAIMEELKASKG 578
Query: 495 EAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGG-----ANGEEGATGEVGMAA 549
+ DPF+RR T+ R Y + E VTA N + P G N +E +
Sbjct: 579 KKVDDPFTRRSTKPRMVYKPEDEETVTAPLNDKSSPHPAGDSVSTVNDKENEQDSKKKQS 638
Query: 550 TEAALEAAAGAGKLVDTNAPLDLGTESNMLHDFELDISLNALKKFGGPQGVLAGFMARKQ 609
TE A HDF++ I L + P VL +
Sbjct: 639 TEDLFNA-----------------------HDFDITIDLE-VPIPSNPVSVLPKPI---N 671
Query: 610 RIEATVGCQVPENDGRRHALTLTVGDYKRRRGLL 643
I+ T G R +L L DYK++RGL+
Sbjct: 672 NIKDT---------GPRRSLNLE--DYKKKRGLI 694
>gi|156392668|ref|XP_001636170.1| predicted protein [Nematostella vectensis]
gi|156223270|gb|EDO44107.1| predicted protein [Nematostella vectensis]
Length = 532
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 116/429 (27%), Positives = 200/429 (46%), Gaps = 49/429 (11%)
Query: 98 NESDDDNHGQMTELEREMMIFERDDKKVDKNLRDKFRSRREERSTRSTKET-------PP 150
+E+D + G+MTE ERE I+ R +K+ + L+ +F R+ R + ++ P
Sbjct: 25 DEADREMLGRMTEKEREQEIYNRVEKR--EALKTRFEIERKLRQAKKKEKKKRKQKEQPH 82
Query: 151 L---PSSRSARLAARSADRAAAKDD----ALNELRAKRLKQQDPEAHRRLRDASRGGSGS 203
+ +S +A R +R ++ AL+ L+AKR ++++ A + + S
Sbjct: 83 IDKGETSDCGGIALRKQERKKVVEEKKARALDNLKAKRSEKKEKRAGEAIVEQKEPLKAS 142
Query: 204 RVLSPVKRKAFTPAGLSSSSQSESESRSHSDDEGSTGDGGMADSDDDGAPGSGRPTY--D 261
V FT +S+S SD+E SD++ A + P D
Sbjct: 143 EV--------FTDDEDDDDQESKS-----SDEESYEA------SDEEYAEYAPVPVSRPD 183
Query: 262 DIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRSY 321
D++ I + R K+ +W PFF + + GCFVR+GIG P+YR+ ++ D E + Y
Sbjct: 184 DLERIRLSRHKMERWVHMPFFAKTLAGCFVRIGIGNHDGRPVYRVAEIK--DVVETAKVY 241
Query: 322 KLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVL 381
L T K L + G + R + VS+ E EF++W E E + +P+ DV
Sbjct: 242 SLGATKTNKGLKLRHGPQERVFR--LEFVSNQRISETEFQRWKEECEAHGIPLPTLDDVE 299
Query: 382 EKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDME 441
+K + I++ Y+ +++++ EK+ P N A +K+ L R E+A++ + + E
Sbjct: 300 KKVKDIEEAKNHAYNEEDIEKIVSEKQKFRKTPFNYAIKKNELIRRKEIAETSGNHEEAE 359
Query: 442 RIKKRLQELEASRDSKVKDAKAIR----LAEMNRKNRVENFKNASELKRVNTSLKAGEAG 497
+I+ L LE ++V D + R ++ +N +NR N K LK E
Sbjct: 360 KIRSELDNLEER--AQVLDKQRSRGLSAISYINERNRKRNI--IEAEKAAAEELKTEEKK 415
Query: 498 YDPFSRRWT 506
DPF+RR T
Sbjct: 416 DDPFTRRKT 424
>gi|440801531|gb|ELR22549.1| Plus3 domain containing protein [Acanthamoeba castellanii str.
Neff]
Length = 627
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 109/400 (27%), Positives = 187/400 (46%), Gaps = 41/400 (10%)
Query: 258 PTYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGP-IYRLCMVRNVDATE 316
PT +++ + + RS L KW +PFFE+ + FVRVGIG ++ YR+ V V A +
Sbjct: 255 PTLEEVNSVKLGRSLLEKWLDQPFFEKTVPRFFVRVGIGMNREQQNAYRMAQV--VVAEK 312
Query: 317 PDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPS 376
R+Y + + T L ++ G S + + VS+SP E+++WLREV++ +P+
Sbjct: 313 GPRTYTVGKKKTQYMLKLSHGGNSK--NFSIEYVSNSPITMPEYERWLREVDKAHMDIPT 370
Query: 377 KQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHD 436
D+ ++ ++ +VY+ + +M++EK +RP+N+AA K L + E A+ R
Sbjct: 371 PADIEARRRDLESTRHYVYTHEDISRMIEEKSQLRARPVNLAATKAHLIQLREAAKDRGT 430
Query: 437 EVDMERIKKRLQEL-EASRDSKVKDAKAIRLAEMNRKNRVENFKNASELKRVNTSLKAGE 495
++ ++ LQ E + K K +++ ++N++N+ +N ++ V ++A
Sbjct: 431 AEEVAKVDAELQRFAELDKRETEKRQKKLKVGDINKRNKAKNIVDSH----VTAVIEAKA 486
Query: 496 AGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANGEEGATGEVGMAATEAALE 555
DPFSRR T + ++I K P G++ ++ ATEA +
Sbjct: 487 ETDDPFSRRPT-APTFHIF-----------ASKPAAPAGSSSSSSSSEPAPPVATEA--K 532
Query: 556 AAAGAGKLVDTNAPLDLGTESN-----------MLHD-FELDISLNALKKFGGPQGVLAG 603
A K D+ + G E LHD +LDI +N L P
Sbjct: 533 TPVPAEKAADSTPVPNKGKEKEEDRAAEPTALLQLHDTLDLDIEVN-LDDLTSPTTKRPV 591
Query: 604 FMARKQRIEATVGCQVPENDGRRHALTLTVGDYKRRRGLL 643
+ +T G E + A++L DYKRRRGLL
Sbjct: 592 SLPHGANRRSTGGGA--EQAAKAKAISL--DDYKRRRGLL 627
>gi|291236308|ref|XP_002738082.1| PREDICTED: Rtf1, Paf1/RNA polymerase II complex component, homolog
(S. cerevisiae)-like, partial [Saccoglossus kowalevskii]
Length = 633
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 125/434 (28%), Positives = 203/434 (46%), Gaps = 38/434 (8%)
Query: 86 DGGASEHEGDSSNESDDDNHGQMTELEREMMIFERDDKKVDKNLRDKFRSRREERSTRST 145
DG A + GD E D MTE ERE +F R +K+ + LR +F R+ R +
Sbjct: 131 DGYADDMMGD---EEDRARLELMTEKEREQELFNRIEKR--EVLRTRFEIERKLRQAKKK 185
Query: 146 KETPPLPSSRSARLAAR---SADRAAAKDDALNELRAKRLKQQDPEAHRRLRDASRGGSG 202
AR R + +R+ + ++E R K+ EA + LR A R
Sbjct: 186 DMKRQKKHEGEARHVHRVKTTHERSQERRRTIDERRDKK-----AEAIKTLR-AEREKKR 239
Query: 203 SRVLSPVKRKAFTPAGLSSS-SQSESESRSHSDDEGSTGDGGMADSDDDGAPGSGRP--- 258
+ +K P +S S+SES+ S + S +D DD+ R
Sbjct: 240 KTAEAQANKKQ--PVKVSDVYSESESDENDDSSGDQSDDSYRASDRDDEDVYEERRSHTV 297
Query: 259 -TYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEP 317
+ DD+ + + R KL +W PFF ++ GCFVR+GIG + P+YR+ + D E
Sbjct: 298 NSKDDLLRVKLSRHKLERWVHMPFFTTVVKGCFVRIGIGTNDGRPVYRVAEI--TDVVET 355
Query: 318 DRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSK 377
+ Y+L + T K L + G + R + VS+ E EF +W E+ N ++P+K
Sbjct: 356 AKIYQLGSTKTNKGLRLRHGTQERVFR--LEFVSNQEFSEHEFFKWKEELMLNGLQLPTK 413
Query: 378 QDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEK-DRLRRELE------V 430
+++ +K IQ + ++ V +M+QEKK P N A +K D ++R E V
Sbjct: 414 EEIEDKYREIQSALKYNFNEDDVDKMVQEKKKFRKNPRNYAMKKTDLMKRRDEADQQGDV 473
Query: 431 AQSRHDEVDMERIKKRLQELEASRDSKVKDAKAIRLAEMNRKNRVENFKNASELKRVNTS 490
Q + ++E +++R +EL+ R K+ AI + +N++NR +N K+A E+
Sbjct: 474 EQVKMYAKELEDLEERAEELDKQR---TKNISAI--SYINQRNRQKNIKDA-EIAMAEEI 527
Query: 491 LKAGEAGYDPFSRR 504
+ A DPF+RR
Sbjct: 528 KELVNAKDDPFTRR 541
>gi|328766449|gb|EGF76503.1| hypothetical protein BATDEDRAFT_92554 [Batrachochytrium
dendrobatidis JAM81]
Length = 590
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 137/282 (48%), Gaps = 18/282 (6%)
Query: 231 SHSDDEGSTGDGGMADSDDDGAPGSGRPTYDDIKEITIRRSKLAKWFMEPFFEELIVGCF 290
SHS+DEG TG +A S P + +DI+ I + R +L +W FF I+GCF
Sbjct: 242 SHSEDEG-TG-SNLASS----LPAAA--NIEDIRSIVVTRDELERWVHADFFSSTIIGCF 293
Query: 291 VRVGIGRSKNG--PIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMA 348
VR+G+G N +YRL V V+ R Y+L T L + G + + M
Sbjct: 294 VRIGVGNDPNTREQVYRLARV--VETPAYHRVYRLAGTLTKIALKIAHGKATKT--FLMD 349
Query: 349 MVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKK 408
+VS+ P E+ ++ + ++ M + V KK +Q +++ + M++ KK
Sbjct: 350 IVSNRPFTVSEWNRYEQTMQIEKQSMITADQVRRKKRDLQSAREHIFTNDEINTMIKRKK 409
Query: 409 SASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKRLQEL-EASRDSKVKDAKAIR-L 466
+ P N+ EK R+++ L+VA+ + D+ ++ + R+ EL + + KD +
Sbjct: 410 TLIKVPANITLEKLRIKQALQVAEEKGDQAQVDIYRDRIFELNQLGEEKSKKDTSHLEAF 469
Query: 467 AEMNRKNRVENFKNASELKRVNTSLK--AGEAGYDPFSRRWT 506
++N +NR NF E ++ LK G YDPF+RR T
Sbjct: 470 TKLNERNRKSNFTEGREAEKNLLELKKSKGTVAYDPFARRKT 511
>gi|324504702|gb|ADY42028.1| RNA polymerase-associated protein RTF1 [Ascaris suum]
Length = 721
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 114/394 (28%), Positives = 196/394 (49%), Gaps = 44/394 (11%)
Query: 262 DIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNG-PIYRLCMVRNVDATEPDRS 320
DI+ I + R KLAK+ PFF + +VGCFVR+GIG++K G +YR V +D E +
Sbjct: 360 DIQRIRLSRYKLAKFVHAPFFTKTVVGCFVRIGIGKNKEGRSVYRAAQV--LDVVETAKV 417
Query: 321 YKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDV 380
Y+LE T K L + G + +++ VS+SP E EF +W R+ + S D
Sbjct: 418 YQLETTRTNKGLKLKHGKDERV--YRLEFVSNSPFTEHEFMKW-RDAMKTSKLPLITIDQ 474
Query: 381 LEKKES-IQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQS--RHDE 437
+EKKE+ I+K + Y+ + +++EK P N A EK +L + + A+ RH+E
Sbjct: 475 VEKKEADIKKAVNYNYTDEDIDHIIKEKARFKKGPFNYAIEKGQLMKLKQEAEQYGRHEE 534
Query: 438 VDMERIKKRLQELEASRDSKV--KDAKAIR-LAEMNRKNRVENFKNASELKRVNTSLKAG 494
E +++++ ELE SR +++ + +++IR ++ +N++NR + K+A +V+ + +
Sbjct: 535 A--ETLQRQIDELE-SRAAELDRRRSQSIRGISWINQRNR-QIMKDAILSGQVHVDISSQ 590
Query: 495 EAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANGEEGATGEVGMAATEAAL 554
+ DPF+R+ R + G+E +A+ + P +NG G + E
Sbjct: 591 D---DPFTRKNARMKPVC----GKEKPVQASTE----PTSSNG-AGYVPQTQPIVGEKTA 638
Query: 555 EAAAGAGKLVDTNAPL-DLGTESNMLHDFELDISL--NALKKFGGP--QGVLAGFMARKQ 609
+ + P+ DL + N D ++DI+L A P V G
Sbjct: 639 DKIISKTTMTGIRHPVQDLFSAHNF--DVDVDIALPPTAPTSSNTPSLNSVELGSRQTST 696
Query: 610 RIEATVGCQVPENDGRRHALTLTVGDYKRRRGLL 643
+++G G R L++ DYKRR+GL+
Sbjct: 697 LAHSSIGG------GSR---PLSLEDYKRRKGLI 721
>gi|332016344|gb|EGI57257.1| RNA polymerase-associated protein Rtf1 [Acromyrmex echinatior]
Length = 678
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 111/404 (27%), Positives = 182/404 (45%), Gaps = 65/404 (16%)
Query: 257 RPTY----DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNV 312
+P Y +D+ +I + R K+ ++ PFF+ ++ GCFVR+GIG + P+YR+ + V
Sbjct: 323 KPVYISTKEDLNKIRLSRHKMERFVHLPFFDRVVQGCFVRIGIGNNNGKPVYRVAEISGV 382
Query: 313 DATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSG 372
E + Y+L T K L + G + R + VS+ + EF +W
Sbjct: 383 --CETGKIYQLGGTRTNKGLKLRHGAQERVFR--LEFVSNQEFTDSEFFKWKETCALQGI 438
Query: 373 RMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQ 432
P+ +V +K + I++ + + ++++++EK+ P N A +K +L RE + A
Sbjct: 439 STPTFDEVEQKLKDIKEALVYEFKEEDIEKIVREKERFKQTPYNYAMKKAQLMRERDAAN 498
Query: 433 SRHDEVDMERIKKRLQELE--ASRDSKVKDAKAIRLAEMNRKNRVENFKNASELKRVNTS 490
R D+ R+ + L ELE AS K++ A ++ +N +NR +N + A K +
Sbjct: 499 CRGDDETASRLNQELSELEERASELDKMRTATISSISYINDRNRKKNVEEAE--KAIMEE 556
Query: 491 LKA--GEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDK-NGVPGG--------ANGEE 539
LKA G+ DPF+RR T+ R Y + EV A DK N P G NG+E
Sbjct: 557 LKANKGKKVDDPFTRRSTKPRMVYKPEDESEVVAVPVNDKSNPHPTGDSVSAVDKENGQE 616
Query: 540 GATGEVGMAATEAALEAAAGAGKLVDTNAPLDLGTESNMLHDFELDISLNALKKFGGPQG 599
+ +TE +A HDF++ I L + P
Sbjct: 617 SKKKQ----STEDLFDA-----------------------HDFDITIDLE-VPIPNNPVS 648
Query: 600 VLAGFMARKQRIEATVGCQVPENDGRRHALTLTVGDYKRRRGLL 643
VL + I+ T G R +L L DYK++RGL+
Sbjct: 649 VLPKPI---NNIKDT---------GPRRSLNLE--DYKKKRGLI 678
>gi|307108722|gb|EFN56961.1| hypothetical protein CHLNCDRAFT_143537 [Chlorella variabilis]
Length = 641
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 124/443 (27%), Positives = 194/443 (43%), Gaps = 52/443 (11%)
Query: 108 MTELEREMMIFERDDKKVDKNLRDKFRSRREERSTRSTKETPPLPSSRSARL-AARSADR 166
MTEL+RE + R +K+ + LR K ++ + ++ R+ + + R R+ + R
Sbjct: 113 MTELQREYELANRAEKRNQEMLRQKLLAKNDAKAERAGAKA----AKRVGRVKSGREERE 168
Query: 167 AAAKDDALNELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSPVKRKAFTPAGLSSSSQSE 226
AAK A+ EL+A R +++ A R R + + SE
Sbjct: 169 EAAKKSAMEELKAAR-ERKARGAEERARKREESDELDEDDEDDGDRRRGRRRDADREGSE 227
Query: 227 SESRSHSDDEGSTGDGGMADSDDDGAPG----------SGRPTYDDIKEITIRRSKLAKW 276
+ DD +GD D D G G +D+K+I +RR KL +W
Sbjct: 228 EGALDSEDD--LSGD----DRRDGGLYGRRGMEEGADEEDEAPEEDVKKIQVRRVKLEQW 281
Query: 277 FMEPFFEELIVGCFVRVGI---GRSKNGPIYRLCMVRNVDATEPD---------RS---Y 321
EPFFE+ + GC VRV G + Y LC V V+ P RS +
Sbjct: 282 VNEPFFEDTLPGCMVRVVAAEQGSDMSQKRYVLCQVVAVEERAPGYYKDSGQAWRSPYPF 341
Query: 322 KLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVL 381
T K+L V GN +A VS+ + EF+ W R ++ S++ V
Sbjct: 342 GPNQEKTHKWLLVERGNSQRGM--PLAQVSNQGFTQAEFESWQRTLKEQHRPQVSRRTVT 399
Query: 382 EKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDME 441
E + K NT+ Y+A V ++LQEKK+ P N+A E+ RL +L A+ +E +
Sbjct: 400 ETHGRLVKANTYTYTAEDVSRLLQEKKAKGQAPRNMALERARLEAQLAGARENGEEEKVA 459
Query: 442 RIKKRLQELEASRDSKVKDAKAIRLAEMNRKNRVENFKNASELKRVNTSLKAGEAG---- 497
++ ++ +LEA + +A++N++N NFKNA + N S + G A
Sbjct: 460 ELEAQMAQLEAGLAGGKGQRRGHNMADLNKRNADMNFKNALD----NVSNRVGAAAGVQD 515
Query: 498 -----YDPFSRRWTRSRNYYISK 515
DPFSRR TR Y+ +K
Sbjct: 516 ATTSQLDPFSRRATRPMIYWSTK 538
>gi|350427275|ref|XP_003494708.1| PREDICTED: RNA polymerase-associated protein Rtf1-like [Bombus
impatiens]
Length = 695
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 105/402 (26%), Positives = 184/402 (45%), Gaps = 61/402 (15%)
Query: 257 RPTY----DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNV 312
+P Y +D+ +I + R K+ ++ PFF+ ++ GCFVR+GIG + P+YR+ + V
Sbjct: 340 KPIYVSTKEDLNKIRLSRHKMERFVHLPFFDRVVQGCFVRIGIGNNNGKPVYRVAEISGV 399
Query: 313 DATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSG 372
E + Y+L T K L + G + R + VS+ E EF +W
Sbjct: 400 --CETGKIYQLGGTRTNKGLKLRHGAQERVFR--LEFVSNQEFTESEFFKWKETCALQGI 455
Query: 373 RMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQ 432
MP+ ++V +K + I++ + + ++++++EK+ P N A +K +L RE + A
Sbjct: 456 SMPTFEEVEQKLKDIKEALVYEFKEEDIEKIVREKERFKQTPYNYAMKKAQLMRERDAAN 515
Query: 433 SRHDEVDMERIKKRLQELE--ASRDSKVKDAKAIRLAEMNRKNRVENFKNASELKRVNTS 490
R D+ R+ + L ELE AS K++ A ++ +N +NR +N + A K +
Sbjct: 516 CRGDDETASRLNQELSELEERASELDKMRTATISSISYINDRNRKKNVEEAE--KAIMEE 573
Query: 491 LKA--GEAGYDPFSRRWTRSRNYYISKPGEE-------VTAEANGDKNGVPGGANGEEGA 541
+KA G+ DPF+RR T+ R + KP +E V +A+ + V +N +E +
Sbjct: 574 IKANKGKKVDDPFTRRSTKPRMVF--KPEDEEISSTALVNDKASPQQTEVVAVSNEKENS 631
Query: 542 TGEVGMAATEAALEAAAGAGKLVDTNAPLDLGTESNMLHDFELDISLNALKKFGGPQGVL 601
+TE A HDF++ I L + P VL
Sbjct: 632 QETKKKQSTEDLFNA-----------------------HDFDITIDLE-VPIPNNPVSVL 667
Query: 602 AGFMARKQRIEATVGCQVPENDGRRHALTLTVGDYKRRRGLL 643
++ + + RR +L + DYK++RGL+
Sbjct: 668 PKPIS-----------NIKDTGPRR---SLNLEDYKKKRGLI 695
>gi|358254073|dbj|GAA54107.1| RNA polymerase-associated protein RTF1 homolog [Clonorchis
sinensis]
Length = 897
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 159/359 (44%), Gaps = 32/359 (8%)
Query: 259 TYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPD 318
+ + + I + R KL KW PFF+ L+ GCFVR+ IG ++ +YR + VD E
Sbjct: 353 SVEQLSRIRLSRFKLEKWVHMPFFDSLVKGCFVRINIGLNQGVAVYRCAEI--VDIIETP 410
Query: 319 RSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQ 378
+ Y L T K + V G + R +A VS+S L EF+ WLR + + + P+
Sbjct: 411 KIYDLGETRTNKGMVVRVGKDQGTFR--LAFVSNSDFLPAEFESWLRRISDANMKPPTLA 468
Query: 379 DVLEKKESIQ-KINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDE 437
V EK IQ IN + V+Q++Q KK P N A K L ++ E A+ D
Sbjct: 469 FVSEKAAQIQDAINKPIKDEHLVEQIIQSKKRFQRAPTNFALRKAELLKQREQAEVEGDT 528
Query: 438 VDMERIKKRLQELE--ASRDSKVKDAKAIRLAEMNRKNRVENFKNASELKRVNTSLKAGE 495
+ ++RI L+++E A R + + + +N++NR+ + + A E R +
Sbjct: 529 LAIQRIDAELEDIETQAERIDRRRTMGFKSITSINQRNRILSVQQAEEAIRRESREAQKS 588
Query: 496 AGYDPFSRRWTR----SRNYYISKPGEEVTAEANGDKN-------------GVPGGANGE 538
DPF+R ++ ++ Y + + +A GD G P A+
Sbjct: 589 KEEDPFTRVHSQPVIVTKKYLEQLRHKRINKDAQGDSQVSLDSTANDGSNPGFPNSASTN 648
Query: 539 EGATGEVGMAATEAALEA-----AAGAGKLVDTNAPLDLGTESNML---HDFELDISLN 589
T + +T + A K + P++L T + L H+FE+ I L+
Sbjct: 649 MLLTPTARIPSTPGQIGGTPFPNTAERVKWTIEDEPINLSTPQDSLHAIHNFEIHIDLD 707
>gi|136255554|ref|NP_001077046.1| RNA polymerase-associated protein RTF1 homolog [Danio rerio]
gi|126635343|dbj|BAF48399.1| RNA polymerase-associated protein Rtf1 homolog [Danio rerio]
Length = 681
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 105/402 (26%), Positives = 181/402 (45%), Gaps = 42/402 (10%)
Query: 252 APGSGRPTY--DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMV 309
AP +P D++ I + R KL +W PFF + + GCFVR+GIG S N P+YR+ +
Sbjct: 312 APPKSQPVSLPDELNRIRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNSSNKPVYRVAEI 371
Query: 310 RNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVER 369
+D E + Y+L + T K L + GN++ R + VS+ E EF +W +
Sbjct: 372 --IDVVETAKIYQLGSTRTNKGLQLRHGNDTRVFR--LEFVSNQEFTESEFMKWKEAMMI 427
Query: 370 NSGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELE 429
++P+ ++ +K++SI++ + ++ ++ +++EK P N A +K +L +E
Sbjct: 428 AGMQLPTLDEINKKEQSIKEAVNYKFNDKDIEDIVKEKDRFRKAPPNYAMKKTQLLKEKA 487
Query: 430 VAQSRHDEVDMERIKKRLQELEASRDS----KVKDAKAIRLAEMNRKNRVENFKNASELK 485
+A+ D + ++ +L ELE ++ + K+ AI + +N++NR N SE
Sbjct: 488 MAEESGDGDKAKTLQDQLNELEERAEALDRQRTKNISAI--SYINQRNRSWNIVE-SEKA 544
Query: 486 RVNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANGEEGATGEV 545
V + DPF+RR KP A + N + G+
Sbjct: 545 LVAEGQNSKNQQMDPFTRRQC--------KPTMVSNARDPSVHAAILAHLNQKYGSGSGA 596
Query: 546 GM-AATEAALEAAAGAGKLVDTNAPL-DLGTESNMLHDFELDISLNALKKFGGPQGVLAG 603
G + +A + + K D P DL + +HDF++ I L P
Sbjct: 597 GQDNSQQANKQLGQASQKDKDVTKPTSDLSEDLFKVHDFDVKIDLQV------PNAEAKS 650
Query: 604 FMARKQRIEATVGCQVPENDG--RRHALTLTVGDYKRRRGLL 643
+ +P DG RR +L + DYK+RRGL+
Sbjct: 651 L--------SVSSNALPVKDGAPRR---SLNLEDYKKRRGLI 681
>gi|322799130|gb|EFZ20577.1| hypothetical protein SINV_08701 [Solenopsis invicta]
Length = 696
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 108/405 (26%), Positives = 180/405 (44%), Gaps = 66/405 (16%)
Query: 257 RPTY----DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNV 312
+P Y +D+ +I + R K+ ++ PFF+ ++ GCFVR+GIG + P+YR+ + V
Sbjct: 340 KPVYISTKEDLNKIRLSRHKMERFVHLPFFDRVVQGCFVRIGIGNNNGKPVYRVAEISGV 399
Query: 313 DATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSG 372
E + Y+L T K L + G + R + VS+ + EF +W
Sbjct: 400 --CETGKIYQLGGTRTNKGLKLRHGAQERVFR--LEFVSNQEFTDSEFFKWKETCALQGI 455
Query: 373 RMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQ 432
P+ +V +K + I++ + + ++++++EK+ P N A +K +L R+ + A
Sbjct: 456 STPTFDEVEQKLKDIKEAMVYEFKEEDIEKIVREKERFKQTPYNYAMKKAQLMRDRDAAN 515
Query: 433 SRHDEVDMERIKKRLQELE--ASRDSKVKDAKAIRLAEMNRKNRVENFKNASELKRVNTS 490
R D+ R+ + L ELE AS K++ A ++ +N +NR +N + A K +
Sbjct: 516 CRGDDETASRLNQELSELEERASELDKMRTATISSISYINDRNRKKNVEEAE--KAIMEE 573
Query: 491 LKA--GEAGYDPFSRRWTRSRNYYISKPGEEV--TAEANGDKNGVPGG--------ANGE 538
LKA G+ DPF+RR T+ R Y + E+ T N N P G NG+
Sbjct: 574 LKANKGKKIDDPFTRRSTKPRMVYKPEDDSEMVATVPVNDKLNPHPAGDSMSAADKENGQ 633
Query: 539 EGATGEVGMAATEAALEAAAGAGKLVDTNAPLDLGTESNMLHDFELDISLNALKKFGGPQ 598
E + +TE A HDF++ I L + P
Sbjct: 634 ESKKKQ----STEDLFNA-----------------------HDFDITIDLE-VPIPSNPV 665
Query: 599 GVLAGFMARKQRIEATVGCQVPENDGRRHALTLTVGDYKRRRGLL 643
VL + I+ T G R +L L DYK++RGL+
Sbjct: 666 SVLPKPI---NNIKDT---------GPRRSLNLE--DYKKKRGLI 696
>gi|384501107|gb|EIE91598.1| hypothetical protein RO3G_16309 [Rhizopus delemar RA 99-880]
Length = 524
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 146/291 (50%), Gaps = 18/291 (6%)
Query: 197 SRGGSGSRVLSPVKR------KAFTPAGLSSSSQSESESR----SHSDDEGSTGDGGMAD 246
++G S S+ LS + R K + G SS + S + R SD E S + +++
Sbjct: 132 AKGSSTSQALSELARRREEKNKVRSKRGRSSEAPSSPDKRRRKRYESDYENSAEESPLSE 191
Query: 247 SDDDGAPGSGRPTYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGR--SKNGPIY 304
+ + P ++I+ I RS + KW PFFE LI+ FVR+ IG K +Y
Sbjct: 192 DESEKKSKKRTPQLEEIQSACISRSMIEKWLFAPFFENLIIDGFVRIFIGHDAQKKTSVY 251
Query: 305 RLCMVRNVDATEPDRSYKLENRTTC-KYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQW 363
RLC V ++ ++YK+ T C K + + G A + M +VS+ P ++E+ ++
Sbjct: 252 RLCQV--LEVVPWHKTYKIGENTWCNKAIKLKHGKAEKA--FPMDIVSNQPVSQQEYSRF 307
Query: 364 LREVERNSGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDR 423
L +E + R+PS + + +K E I+ +V + V +M+++K+S N A EK +
Sbjct: 308 LSTLEYDRIRVPSIKQINQKVEDIKNAREYVLNDKEVNEMIEKKRSVKGSSTNAALEKAQ 367
Query: 424 LRRELEVAQSRHDEVDMERIKKRLQELEASRDSKVKDAKAIRLAEMNRKNR 474
L LE A+S ++ + ++ K L+ELE R +D K A +N +NR
Sbjct: 368 LIARLEHAKSNNEIDQVLKLTKELKELE-ERTFNAEDQKQNVWAGINSRNR 417
>gi|256084298|ref|XP_002578367.1| hypothetical protein [Schistosoma mansoni]
gi|353231347|emb|CCD77765.1| hypothetical protein Smp_161170 [Schistosoma mansoni]
Length = 717
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 164/356 (46%), Gaps = 32/356 (8%)
Query: 259 TYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPD 318
+ + + I + R K+ KW PFF++LI GCFVR+ IG + PIYR + VD E
Sbjct: 297 SVEHLSRIRLSRFKMEKWVHMPFFDDLIKGCFVRINIGLHQGVPIYRCAEI--VDVVETP 354
Query: 319 RSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQ 378
+ Y L + T K + V G + S R +A +S+S ++EF W+R + + + P+
Sbjct: 355 KIYDLGDTRTNKGIVVRVGKDQSTFR--LAFISNSDFQQDEFDSWMRRIHLANMKPPTLN 412
Query: 379 DVLEKKESI-QKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDE 437
V +K I + IN + V+Q++Q K+ P N A K L ++ E A++ D
Sbjct: 413 FVRDKAAEITEAINRPIRDERVVEQIIQSKRRFQKAPTNFALRKAELIKQREQAETDGDT 472
Query: 438 VDMERIKKRLQELE--ASRDSKVKDAKAIRLAEMNRKNRVENFKNASELKRVNTSLKAGE 495
++ + ++E+E A R + + + +N++NR + + A E R +
Sbjct: 473 ELLKHLDSEIEEIESQAERIERRRTLGFKSITSINQRNRALSVQQAEEAIRKESEEALNS 532
Query: 496 AGYDPFSRRWTRSRNYYISKPGEE--------VTAEANGDKNGVPGGANGEEGATGEVGM 547
DPF+R S+ ++K E V A++N + E+ M
Sbjct: 533 KEEDPFTR--VHSQPVIVTKKYLENLRHKRLGVVAQSNTSTCDLNQSLPPPPTPDSELSM 590
Query: 548 AATEAALEAAAGAGKLVDTNAP----LDLGTE-SNM---------LHDFELDISLN 589
++ + L G+ ++ T AP LG + SN+ +H+FE++I L+
Sbjct: 591 SSKHSLLNTPMGSNSIL-TEAPDSVCWSLGDDNSNLSTPHDSLHAIHNFEINIDLD 645
>gi|301754857|ref|XP_002913302.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog
[Ailuropoda melanoleuca]
Length = 814
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 104/391 (26%), Positives = 180/391 (46%), Gaps = 45/391 (11%)
Query: 261 DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRS 320
+++ + + R KL +W PFF + + GCFVR+GIG + P+YR+ + V E +
Sbjct: 461 EELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAEITGV--VETAKV 518
Query: 321 YKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDV 380
Y+L T K L + GN+ R + VS+ E EF +W + ++P+ ++
Sbjct: 519 YQLGGTRTNKGLQLRHGNDQRVFR--LEFVSNQEFTESEFMKWKEAMFSAGMQLPTLDEI 576
Query: 381 LEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDM 440
+K+ SI++ + ++ ++++++EK+ P N A +K +L +E +A+ D+
Sbjct: 577 NKKELSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKAMAEDLGDQDKA 636
Query: 441 ERIKKRLQELEASRDS----KVKDAKAIRLAEMNRKNRVENFKNASELKRVNTSLKAGEA 496
++I+ +L ELE ++ + K+ AI + +N++NR N SE V S
Sbjct: 637 KQIQDQLNELEERAEALDRQRTKNISAI--SYINQRNREWNIVE-SEKALVAESHNMKNQ 693
Query: 497 GYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANGEEGATGEVGMAATEAALEA 556
DPF+RR KP T +N V + A G+ +A E
Sbjct: 694 QMDPFTRRQC--------KP----TIVSNSRDPAVQAAILAQLNAKYGSGVLP-DAPKEM 740
Query: 557 AAGAGKLVDTN--APLDLGTESNMLHDFELDISLNALKKFGGPQGVLAGFMARKQRIEAT 614
+ G GK D N + DL + +HDF++ I L + + + A
Sbjct: 741 SKGQGKDKDLNSKSASDLSEDLFKVHDFDVKIDLQV--------------PSSESKALAI 786
Query: 615 VGCQVPENDG--RRHALTLTVGDYKRRRGLL 643
P DG RR +L + DYK+RRGL+
Sbjct: 787 TSKAPPAKDGAPRR---SLNLEDYKKRRGLI 814
>gi|383851969|ref|XP_003701503.1| PREDICTED: RNA polymerase-associated protein Rtf1-like [Megachile
rotundata]
Length = 695
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 105/400 (26%), Positives = 178/400 (44%), Gaps = 57/400 (14%)
Query: 257 RPTY----DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNV 312
+P Y +D+ +I + R K+ ++ PFF+ ++ GCFVR+GIG + P+YR+ + V
Sbjct: 340 KPVYVSTKEDLNKIRLSRHKMERFVHLPFFDRVVQGCFVRIGIGNNNGKPVYRVAEISGV 399
Query: 313 DATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSG 372
E + Y+L T K L + G + R + VS+ E EF +W
Sbjct: 400 --CETGKIYQLGGTRTNKGLKLRHGAQERVFR--LEFVSNQEFTESEFFKWKETCALQGI 455
Query: 373 RMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQ 432
MP+ ++V +K + I++ + + ++++++EK+ P N A +K +L RE + A
Sbjct: 456 SMPTFEEVEQKLKDIKEALVYEFKEEDIEKIVREKERFKQTPYNYAMKKAQLMRERDAAN 515
Query: 433 SRHDEVDMERIKKRLQELE--ASRDSKVKDAKAIRLAEMNRKNRVENFKNASELKRVNTS 490
R D+ R+ + L ELE AS K++ A ++ +N +NR +N + A +
Sbjct: 516 CRGDDETASRLNQELSELEERASELDKMRTATISSISYINDRNRKKNVEEAEKAIMEEVK 575
Query: 491 LKAGEAGYDPFSRRWTRSRNYYISKP-GEEVTAEANGDKNGVP------GGANGEEGATG 543
G+ DPF+RR T+ R + KP EEV++ + P N +E
Sbjct: 576 ANKGKKVDDPFTRRSTKPRMVF--KPEDEEVSSTVPVNDKSSPQQTETITANNEKENGQE 633
Query: 544 EVGMAATEAALEAAAGAGKLVDTNAPLDLGTESNMLHDFELDISLNALKKFGGPQGVLAG 603
+TE A HDF++ I L + P VL
Sbjct: 634 TKKKQSTEDLFNA-----------------------HDFDITIDLE-VPIPNNPVSVLPK 669
Query: 604 FMARKQRIEATVGCQVPENDGRRHALTLTVGDYKRRRGLL 643
++ I+ T G R +L L DYK++RGL+
Sbjct: 670 PIS---NIKDT---------GPRRSLNLE--DYKKKRGLI 695
>gi|340373171|ref|XP_003385115.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog
[Amphimedon queenslandica]
Length = 647
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 107/398 (26%), Positives = 184/398 (46%), Gaps = 32/398 (8%)
Query: 256 GRP--TYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVD 313
RP T +++ +I + R +L KW PFF ++I GC+VR+GIG+ + IYR+C + V
Sbjct: 272 NRPINTIEELSKIKMSRFRLEKWVHMPFFADVIRGCYVRIGIGQHEGRMIYRVCEI--VS 329
Query: 314 ATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGR 373
E + Y L T K L + +G + R M +S+S ++EF +W E E +S +
Sbjct: 330 VHETSKVYTLGGTKTNKGLKLRFGQQERIFR--MEYISNSAFTDQEFSKWKAENEAHSIK 387
Query: 374 MPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQ- 432
+P+ +V +K + I+K + + +++QEK+ P N A K+RL RE E+A+
Sbjct: 388 LPTLFEVEKKVKEIEKYKSASLKEEDIDRIIQEKQKFQKNPHNYALTKNRLMREKEIAEQ 447
Query: 433 --SRHDEVDMERIKKRLQELEASRD-SKVKDAKAIRLAEMNRKNRVENFKNASE-LKRVN 488
S D+ R + L+E D + + AI + +N +NR N A E LK
Sbjct: 448 TGSTEKATDLARKLEELEERAEELDKQRTRGLSAI--SYINERNRQRNVARAEEALKEEM 505
Query: 489 TSLKAGEAGYDPFSRRWTRSRNY-YISK--PGEEVTAEANGDKNGVPGGANGEEGATGEV 545
++K E DPF+RR R ++S+ G+E +G + + + +
Sbjct: 506 ANIKDKEE--DPFTRRKCMPRLVTFVSRGSLGKEAGISGVDATDGSASASVSKSNGSNQT 563
Query: 546 GMAATEAALEAAAGAGKLVDTNAPLDLGTESNMLHDFELDISLNALKKFGGPQGVLAGFM 605
A + + + T+ H+F+++I L P +
Sbjct: 564 PDVVVSAVDVDSLPPPPPLPLSLAAPAPTDLFSAHNFDINIDL--------PNNTTGPVV 615
Query: 606 ARKQRIEATVGCQVPENDGRRHALTLTVGDYKRRRGLL 643
+ +T V + DG + +L L+ DYK+RRGL+
Sbjct: 616 KASSKTIST----VIKTDGPKRSLNLS--DYKKRRGLI 647
>gi|307187750|gb|EFN72722.1| RNA polymerase-associated protein Rtf1 [Camponotus floridanus]
Length = 702
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 106/402 (26%), Positives = 177/402 (44%), Gaps = 59/402 (14%)
Query: 257 RPTY----DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNV 312
+P Y +D+ +I + R K+ ++ PFF+ ++ GCFVR+GIG + P+YR+ + V
Sbjct: 345 KPVYISTKEDLNKIRLSRHKMERFVHLPFFDRVVQGCFVRIGIGNNNGKPVYRVAEISGV 404
Query: 313 DATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSG 372
E + Y+L T K L + G + R + VS+ + EF +W
Sbjct: 405 --CETGKIYQLGGTRTNKGLKLRHGAQERVFR--LEFVSNQEFTDSEFFKWKETCAVQGI 460
Query: 373 RMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQ 432
+P+ +V +K + I + + Y ++++++EK+ P N A +K +L RE + A
Sbjct: 461 SVPTFDEVEQKLKDINEALLYEYKEEDIEKIVREKERFKQTPYNYAMKKAQLMRERDAAN 520
Query: 433 SRHDEVDMERIKKRLQELE--ASRDSKVKDAKAIRLAEMNRKNRVENFKNASELKRVNTS 490
R D+ R+ + L ELE AS K++ A ++ +N +NR +N + A K +
Sbjct: 521 CRGDDETASRLNQELSELEERASELDKMRTATISSISYINDRNRKKNVEEAE--KAIMEE 578
Query: 491 LKA--GEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVP-------GGANGEEGA 541
LKA G+ DPF+RR T+ R + + EV + + P AN +E
Sbjct: 579 LKANKGKKIDDPFTRRSTKPRMVFKPEDESEVVSTVPINDKSSPHPTVDSVSTANDKENG 638
Query: 542 TGEVGMAATEAALEAAAGAGKLVDTNAPLDLGTESNMLHDFELDISLNALKKFGGPQGVL 601
+TE A HDF++ I L + P VL
Sbjct: 639 QESKKKQSTEDLFNA-----------------------HDFDITIDL-EVPIPSNPVSVL 674
Query: 602 AGFMARKQRIEATVGCQVPENDGRRHALTLTVGDYKRRRGLL 643
+ I+ T G R +L L DYK++RGL+
Sbjct: 675 PKPI---NNIKDT---------GPRRSLNLE--DYKKKRGLI 702
>gi|126278415|ref|XP_001381216.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog
[Monodelphis domestica]
Length = 709
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 108/402 (26%), Positives = 183/402 (45%), Gaps = 47/402 (11%)
Query: 252 APGSGRPTY--DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMV 309
P +P +++ + + R KL +W PFF + + GCFVR+GIG + P+YR+ +
Sbjct: 345 VPPKSQPVSLPEELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAEI 404
Query: 310 RNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVER 369
V E + Y+L T K L + GN+ R + VS+ E EF +W +
Sbjct: 405 TGV--VETAKVYQLGGTRTNKGLQLRHGNDQRVFR--LEFVSNQEFTESEFMKWKEAMFS 460
Query: 370 NSGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELE 429
++P+ ++ +K+ SI++ + ++ ++++++EK+ P N A +K +L +E
Sbjct: 461 AGMQLPTLDEINKKEVSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKA 520
Query: 430 VAQSRHDEVDMERIKKRLQELEASRDS----KVKDAKAIRLAEMNRKNRVENFKNASELK 485
+A+ D+ ++I+ +L ELE ++ + K+ AI + +N++NR N SE
Sbjct: 521 MAEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAI--SYINQRNREWNIVE-SEKA 577
Query: 486 RVNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANGEEGATGEV 545
V S DPF+RR KP T +N V + A
Sbjct: 578 LVAESHNMKNQQMDPFTRRQC--------KP----TIVSNSRDPAVQAAILAQLNAKYGS 625
Query: 546 GMAATEAALEAAAGAGKLVDTN--APLDLGTESNMLHDFELDISLNALKKFGGPQGVLAG 603
G A +A E G GK D N + DL + +HDF++ I L P
Sbjct: 626 G-ALPDAPKEMNKGQGKDKDVNSKSASDLSEDLFKVHDFDVKIDLQV------P------ 672
Query: 604 FMARKQRIEATVGCQVPENDG--RRHALTLTVGDYKRRRGLL 643
+ + + A P DG RR +L + DYK+RRGL+
Sbjct: 673 --SSESKTLAITSKAPPAKDGAPRR---SLNLEDYKKRRGLI 709
>gi|380026154|ref|XP_003696824.1| PREDICTED: RNA polymerase-associated protein Rtf1-like [Apis
florea]
Length = 695
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 143/277 (51%), Gaps = 17/277 (6%)
Query: 257 RPTY----DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNV 312
+P Y +D+ +I + R K+ ++ PFF+ ++ GCFVR+GIG + P+YR+ + V
Sbjct: 340 KPIYVSTKEDLNKIRLSRHKMERFVHLPFFDRVVQGCFVRIGIGNNNGKPVYRVAEISGV 399
Query: 313 DATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSG 372
E + Y+L T K L + G + R + VS+ E EF +W
Sbjct: 400 --CETGKIYQLGGTRTNKGLKLRHGAQERVFR--LEFVSNQEFTESEFFKWKETCALQGI 455
Query: 373 RMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQ 432
MP+ ++V +K + I++ + + ++++++EK+ P N A +K +L RE + A
Sbjct: 456 SMPTFEEVEQKLKDIKEALVYEFKEEDIEKIVREKERFKQTPYNYAMKKAQLMRERDAAN 515
Query: 433 SRHDEVDMERIKKRLQELE--ASRDSKVKDAKAIRLAEMNRKNRVENFKNASELKRVNTS 490
R D+ R+ + L ELE AS K++ A ++ +N +NR +N + A K +
Sbjct: 516 CRGDDETASRLNQELSELEERASELDKMRTATISSISYINDRNRKKNVEEAE--KAIMEE 573
Query: 491 LKA--GEAGYDPFSRRWTRSRNYYISKP-GEEVTAEA 524
KA G+ DPF+RR T+ R + KP EEV++ A
Sbjct: 574 FKANKGKKVDDPFTRRSTKPRMVF--KPEDEEVSSTA 608
>gi|355692628|gb|EHH27231.1| hypothetical protein EGK_17386 [Macaca mulatta]
gi|355777961|gb|EHH62997.1| hypothetical protein EGM_15879 [Macaca fascicularis]
Length = 588
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 106/401 (26%), Positives = 187/401 (46%), Gaps = 44/401 (10%)
Query: 253 PGSGRPTY--DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVR 310
P +P +++ + + R KL +W PFF + + GCFVR+GIG + P+YR+ +
Sbjct: 222 PPKSQPVSLPEELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAEIT 281
Query: 311 NVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERN 370
V E + Y+L T K L + GN+ R + VS+ E EF +W +
Sbjct: 282 GV--VETAKVYQLGGTRTNKGLQLRHGNDQRVFR--LEFVSNQEFTESEFMKWKEAMFSA 337
Query: 371 SGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEV 430
++P+ ++ +K+ SI++ + ++ ++++++EK+ P N A +K +L +E +
Sbjct: 338 GMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKAM 397
Query: 431 AQSRHDEVDMERIKKRLQELEASRDS----KVKDAKAIRLAEMNRKNRVENFKNASELKR 486
A+ D+ ++I+ +L ELE ++ + K+ AI + +N++NR N SE
Sbjct: 398 AEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAI--SYINQRNREWNIVE-SEKAL 454
Query: 487 VNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANGEEGATGEVG 546
V S DPF+RR KP + + + N + G +G +
Sbjct: 455 VAESHNMKNQQMDPFTRRQC--------KPTIVSNSRDPAVQAAILAQLNAKYG-SGVLP 505
Query: 547 MAATEAALEAAAGAGKLVDTN--APLDLGTESNMLHDFELDISLNALKKFGGPQGVLAGF 604
A E + +A+AG GK D N + DL + +HDF++ I L
Sbjct: 506 DAPKEMS-KASAGQGKDKDLNSKSASDLSEDLFKVHDFDVKIDLQV-------------- 550
Query: 605 MARKQRIEATVGCQVPENDG--RRHALTLTVGDYKRRRGLL 643
+ + + A P DG RR +L + DYK+RRGL+
Sbjct: 551 PSSESKALAITSKAPPAKDGAPRR---SLNLEDYKKRRGLI 588
>gi|328789618|ref|XP_001121513.2| PREDICTED: RNA polymerase-associated protein Rtf1 [Apis mellifera]
Length = 695
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 143/277 (51%), Gaps = 17/277 (6%)
Query: 257 RPTY----DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNV 312
+P Y +D+ +I + R K+ ++ PFF+ ++ GCFVR+GIG + P+YR+ + V
Sbjct: 340 KPIYVSTKEDLNKIRLSRHKMERFVHLPFFDRVVQGCFVRIGIGNNNGKPVYRVAEISGV 399
Query: 313 DATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSG 372
E + Y+L T K L + G + R + VS+ E EF +W
Sbjct: 400 --CETGKIYQLGGTRTNKGLKLRHGAQERVFR--LEFVSNQEFTESEFFKWKETCALQGI 455
Query: 373 RMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQ 432
MP+ ++V +K + I++ + + ++++++EK+ P N A +K +L RE + A
Sbjct: 456 SMPTFEEVEQKLKDIKEALVYEFKEEDIEKIVREKERFKQTPYNYAMKKAQLMRERDAAN 515
Query: 433 SRHDEVDMERIKKRLQELE--ASRDSKVKDAKAIRLAEMNRKNRVENFKNASELKRVNTS 490
R D+ R+ + L ELE AS K++ A ++ +N +NR +N + A K +
Sbjct: 516 CRGDDETASRLNQELSELEERASELDKMRTATISSISYINDRNRKKNVEEAE--KAIMEE 573
Query: 491 LKA--GEAGYDPFSRRWTRSRNYYISKP-GEEVTAEA 524
KA G+ DPF+RR T+ R + KP EEV++ A
Sbjct: 574 FKANKGKKVDDPFTRRSTKPRMVF--KPEDEEVSSTA 608
>gi|395503439|ref|XP_003756073.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog
[Sarcophilus harrisii]
Length = 907
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 178/391 (45%), Gaps = 45/391 (11%)
Query: 261 DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRS 320
+++ + + R KL +W PFF + + GCFVR+GIG + P+YR+ + V E +
Sbjct: 554 EELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAEITGV--VETAKV 611
Query: 321 YKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDV 380
Y+L T K L + GN+ R + VS+ E EF +W + ++P+ ++
Sbjct: 612 YQLGGTRTNKGLQLRHGNDQRVFR--LEFVSNQEFTESEFMKWKEAMFSAGMQLPTLDEI 669
Query: 381 LEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDM 440
+K+ SI++ + ++ ++++++EK+ P N A +K +L +E +A+ D+
Sbjct: 670 NKKEVSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKAMAEDLGDQDKA 729
Query: 441 ERIKKRLQELEASRDS----KVKDAKAIRLAEMNRKNRVENFKNASELKRVNTSLKAGEA 496
++I+ +L ELE ++ + K+ AI + +N++NR N SE V S
Sbjct: 730 KQIQDQLNELEERAEALDRQRTKNISAI--SYINQRNREWNIVE-SEKALVAESHNMKNQ 786
Query: 497 GYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANGEEGATGEVGMAATEAALEA 556
DPF+RR + T +N V + A G A +A E
Sbjct: 787 QMDPFTRRQCKP------------TIVSNSRDPAVQAAILAQLNAKYGSG-ALPDAPKEM 833
Query: 557 AAGAGKLVDTN--APLDLGTESNMLHDFELDISLNALKKFGGPQGVLAGFMARKQRIEAT 614
G GK D N + DL + +HDF++ I L + + + A
Sbjct: 834 NKGQGKDKDINSKSASDLSEDLFKVHDFDVKIDLQV--------------PSSESKTLAI 879
Query: 615 VGCQVPENDG--RRHALTLTVGDYKRRRGLL 643
P DG RR +L + DYK+RRGL+
Sbjct: 880 TSKAPPAKDGAPRR---SLNLEDYKKRRGLI 907
>gi|308811050|ref|XP_003082833.1| Paf1/RNA polymerase II complex, RTF1 component (involved in
regulation of TATA box-binding protein) (ISS)
[Ostreococcus tauri]
gi|116054711|emb|CAL56788.1| Paf1/RNA polymerase II complex, RTF1 component (involved in
regulation of TATA box-binding protein) (ISS)
[Ostreococcus tauri]
Length = 430
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 141/276 (51%), Gaps = 31/276 (11%)
Query: 259 TYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGP-IYRLCMVRNVDATEP 317
T +I+ ITIRR +L W EPFFE +VGC RVGIG +K+G +YRL + V A
Sbjct: 32 TKAEIESITIRRHQLESWISEPFFESAVVGCLTRVGIGLNKHGENVYRLVEISGV-AEGK 90
Query: 318 DRSYKLENRTTCK-------YLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERN 370
+ Y L+ K +L + WG R ++ +S+S + E+ QW+ R+
Sbjct: 91 YKQYSLKPYAYVKDKPPTNVWLVLKWGQSEKTFR--ISEISNSATQDNEWSQWVAHC-RD 147
Query: 371 SGRMP-SKQDVLEKKESIQKINTFVYSAATVKQML-QEKKSASSRPLNVAAEKDRLRREL 428
+G P + +DV + E++++ + Y+ V ++L Q+++ N+ EK+++R +
Sbjct: 148 AGCKPITSEDVQKALENLREAQNYRYTTDDVTKILAQKRERLGGVRHNLLFEKEQIRTAI 207
Query: 429 EVAQSRHDEVDMERIKKRLQELE-------ASRDSKVKDAKAIRLAEMNRKNRVEN---- 477
A++ D E ++ RL+E++ R +DA LA +NRKN ++N
Sbjct: 208 AHAEAEDDFAKAEELRGRLEEIDREVKARLEQRSGSTQDA----LANINRKNEIQNSEKL 263
Query: 478 FKNASE-LKRVNTSLKAGEAGYDPFSRRWTRSRNYY 512
K ASE + R+ L G DPFSRR TR Y+
Sbjct: 264 SKRASEQVARLKKGLANTGEG-DPFSRRPTRLTTYW 298
>gi|395837918|ref|XP_003791875.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase-associated protein
RTF1 homolog [Otolemur garnettii]
Length = 684
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 105/391 (26%), Positives = 180/391 (46%), Gaps = 45/391 (11%)
Query: 261 DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRS 320
+++ + + R KL +W PFF + + GCFVR+GIG + P+YR+ + V E +
Sbjct: 331 EELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAEITGV--VETAKV 388
Query: 321 YKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDV 380
Y+L T K L + GN+ R + VS+ E EF +W + ++P+ ++
Sbjct: 389 YQLGGTRTNKGLQLRHGNDQRVFR--LEFVSNQEFTESEFMKWKEAMFSAGMQLPTLDEI 446
Query: 381 LEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDM 440
+K+ SI++ + ++ ++++++EK+ P N A +K +L +E +A+ D+
Sbjct: 447 NKKELSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKAMAEDLGDQDKA 506
Query: 441 ERIKKRLQELEASRDS----KVKDAKAIRLAEMNRKNRVENFKNASELKRVNTSLKAGEA 496
++I+ +L ELE ++ + K+ AI + +N++NR N SE V S
Sbjct: 507 KQIQDQLNELEERAEALDRQRTKNISAI--SYINQRNREWNIVE-SEKALVAESHNMKNQ 563
Query: 497 GYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANGEEGATGEVGMAATEAALEA 556
DPF+RR KP T +N V + A G A +A E
Sbjct: 564 QMDPFTRRQC--------KP----TIVSNSRDPAVQAAILAQLNAKYGSG-ALPDAPKEM 610
Query: 557 AAGAGKLVDTN--APLDLGTESNMLHDFELDISLNALKKFGGPQGVLAGFMARKQRIEAT 614
+ G GK D N + DL + +HDF++ I L + + + A
Sbjct: 611 SKGQGKDKDLNSKSASDLSEDLFKVHDFDVKIDLQV--------------PSSESKALAI 656
Query: 615 VGCQVPENDG--RRHALTLTVGDYKRRRGLL 643
P DG RR +L + DYK+RRGL+
Sbjct: 657 TSKAPPAKDGAPRR---SLNLEDYKKRRGLI 684
>gi|344294018|ref|XP_003418716.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog
[Loxodonta africana]
Length = 710
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 104/391 (26%), Positives = 180/391 (46%), Gaps = 45/391 (11%)
Query: 261 DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRS 320
+++ + + R KL +W PFF + + GCFVR+GIG + P+YR+ + V E +
Sbjct: 357 EELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAEITGV--VETAKV 414
Query: 321 YKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDV 380
Y+L T K L + GN+ R + VS+ E EF +W + ++P+ ++
Sbjct: 415 YQLGGTRTNKGLQLRHGNDQRVFR--LEFVSNQEFTESEFMKWKEAMFSAGMQLPTLDEI 472
Query: 381 LEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDM 440
+K+ SI++ + ++ ++++++EK+ P N A +K +L +E +A+ D+
Sbjct: 473 NKKEFSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKAMAEDLGDQDKA 532
Query: 441 ERIKKRLQELEASRDS----KVKDAKAIRLAEMNRKNRVENFKNASELKRVNTSLKAGEA 496
++I+ +L ELE ++ + K+ AI + +N++NR N SE V S
Sbjct: 533 KQIQDQLNELEERAEALDRQRTKNISAI--SYINQRNREWNIVE-SEKALVAESHNMKNQ 589
Query: 497 GYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANGEEGATGEVGMAATEAALEA 556
DPF+RR KP T +N V + A G+ +A E
Sbjct: 590 QMDPFTRRQC--------KP----TIVSNSRDPAVQAAILAQLNAKYGSGVLP-DAPKEM 636
Query: 557 AAGAGKLVDTN--APLDLGTESNMLHDFELDISLNALKKFGGPQGVLAGFMARKQRIEAT 614
+ G GK D N + DL + +HDF++ I L + + + A
Sbjct: 637 SKGQGKEKDLNSKSASDLSEDLFKVHDFDVKIDLQV--------------PSSESKALAI 682
Query: 615 VGCQVPENDG--RRHALTLTVGDYKRRRGLL 643
P DG RR +L + DYK+RRGL+
Sbjct: 683 TSKAPPAKDGAPRR---SLNLEDYKKRRGLI 710
>gi|195976788|ref|NP_084388.2| RNA polymerase-associated protein RTF1 homolog precursor [Mus
musculus]
gi|313471454|sp|A2AQ19.1|RTF1_MOUSE RecName: Full=RNA polymerase-associated protein RTF1 homolog
Length = 715
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 104/391 (26%), Positives = 180/391 (46%), Gaps = 45/391 (11%)
Query: 261 DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRS 320
+++ + + R KL +W PFF + + GCFVR+GIG + P+YR+ + V E +
Sbjct: 362 EELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAEITGV--VETAKV 419
Query: 321 YKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDV 380
Y+L T K L + GN+ R + VS+ E EF +W + ++P+ ++
Sbjct: 420 YQLGGTRTNKGLQLRHGNDQRVFR--LEFVSNQEFTESEFMKWKEAMFSAGMQLPTLDEI 477
Query: 381 LEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDM 440
+K+ SI++ + ++ ++++++EK+ P N A +K +L +E +A+ D+
Sbjct: 478 NKKELSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKAMAEDLGDQDKA 537
Query: 441 ERIKKRLQELEASRDS----KVKDAKAIRLAEMNRKNRVENFKNASELKRVNTSLKAGEA 496
++I+ +L ELE ++ + K+ AI + +N++NR N SE V S
Sbjct: 538 KQIQDQLNELEERAEALDRQRTKNISAI--SYINQRNREWNIVE-SEKALVAESHNMRNQ 594
Query: 497 GYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANGEEGATGEVGMAATEAALEA 556
DPF+RR KP T +N V + A G+ +A E
Sbjct: 595 QMDPFTRRQC--------KP----TIVSNSRDPAVQAAILAQLNAKYGSGVLP-DAPKEM 641
Query: 557 AAGAGKLVDTNAPL--DLGTESNMLHDFELDISLNALKKFGGPQGVLAGFMARKQRIEAT 614
+ G GK D N+ DL + +HDF++ I L + + + A
Sbjct: 642 SKGQGKDKDLNSKTASDLSEDLFKVHDFDVKIDLQV--------------PSSESKALAI 687
Query: 615 VGCQVPENDG--RRHALTLTVGDYKRRRGLL 643
P DG RR +L + DYK+RRGL+
Sbjct: 688 TSKAPPAKDGAPRR---SLNLEDYKKRRGLI 715
>gi|167536419|ref|XP_001749881.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771596|gb|EDQ85260.1| predicted protein [Monosiga brevicollis MX1]
Length = 572
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 125/239 (52%), Gaps = 15/239 (6%)
Query: 249 DDGAP------GSGRPTYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIG--RSKN 300
DDGAP T+++++ I + R KL W EPFFE+ ++G VRV IG + N
Sbjct: 205 DDGAPVVEDEEDYIEATFEELESIRVSRHKLFTWAHEPFFEKTVLGLVVRVSIGVNHTTN 264
Query: 301 GPIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEF 360
YR+ ++ +V E R Y LE T ++ V G S R++MA VS+ P E+
Sbjct: 265 VETYRMGIIESV---ERGRVYSLEKTKTDLHIRVRHG--SDIKRFRMAYVSNKPIAHSEY 319
Query: 361 KQWLREVERNSGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAE 420
+W +R+ G + + V +K E + +++ + V ++ KK +N AE
Sbjct: 320 VRWADATKRSDGSLVMRSHVKKKLEDLAHAKDYIHKGSDVAFIVASKKRVGVAAINKVAE 379
Query: 421 KDRLRRELEVAQSRHDEVDMERIKKRLQELEASRDS--KVKDAKAIRLAEMNRKNRVEN 477
K+RL+REL A+ D+ +++R+++ L + + K+K+ ++A +N +NR++N
Sbjct: 380 KERLQRELARAELTGDKAEVDRLQEELDRVMVKQVQAYKMKEHHQAQVARVNERNRLDN 438
>gi|291403190|ref|XP_002718013.1| PREDICTED: Paf1/RNA polymerase II complex component [Oryctolagus
cuniculus]
Length = 710
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 104/391 (26%), Positives = 179/391 (45%), Gaps = 45/391 (11%)
Query: 261 DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRS 320
+++ + + R KL +W PFF + + GCFVR+GIG + P+YR+ + V E +
Sbjct: 357 EELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAEITGV--VETAKV 414
Query: 321 YKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDV 380
Y+L T K L + GN+ R + VS+ E EF +W + ++P+ ++
Sbjct: 415 YQLGGTRTNKGLQLRHGNDQRVFR--LEFVSNQEFTESEFMKWKEAMFSAGMQLPTLDEI 472
Query: 381 LEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDM 440
+K+ SI++ + ++ ++++++EK+ P N A +K +L +E +A+ D+
Sbjct: 473 NKKELSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKAMAEDLGDQDKA 532
Query: 441 ERIKKRLQELEASRDS----KVKDAKAIRLAEMNRKNRVENFKNASELKRVNTSLKAGEA 496
++I+ +L ELE ++ + K+ AI + +N++NR N SE V S
Sbjct: 533 KQIQDQLNELEERAEALDRQRTKNISAI--SYINQRNREWNIVE-SEKALVAESHNMKNQ 589
Query: 497 GYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANGEEGATGEVGMAATEAALEA 556
DPF+RR KP T +N V + A G+ +A E
Sbjct: 590 QMDPFTRRQC--------KP----TIVSNSRDPAVQAAILAQLNAKYGSGVLP-DAPKEM 636
Query: 557 AAGAGKLVDTN--APLDLGTESNMLHDFELDISLNALKKFGGPQGVLAGFMARKQRIEAT 614
G GK D N + DL + +HDF++ I L + + + A
Sbjct: 637 TKGQGKDKDLNSKSASDLSEDLFKVHDFDVKIDLQV--------------PSSESKALAI 682
Query: 615 VGCQVPENDG--RRHALTLTVGDYKRRRGLL 643
P DG RR +L + DYK+RRGL+
Sbjct: 683 TSKAPPAKDGAPRR---SLNLEDYKKRRGLI 710
>gi|195976782|ref|NP_055953.3| RNA polymerase-associated protein RTF1 homolog [Homo sapiens]
gi|114656497|ref|XP_001142072.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Pan
troglodytes]
gi|332235216|ref|XP_003266801.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Nomascus
leucogenys]
gi|426378728|ref|XP_004056064.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Gorilla
gorilla gorilla]
gi|313104316|sp|Q92541.4|RTF1_HUMAN RecName: Full=RNA polymerase-associated protein RTF1 homolog
gi|410215686|gb|JAA05062.1| Rtf1, Paf1/RNA polymerase II complex component, homolog [Pan
troglodytes]
gi|410308526|gb|JAA32863.1| Rtf1, Paf1/RNA polymerase II complex component, homolog [Pan
troglodytes]
Length = 710
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 106/401 (26%), Positives = 183/401 (45%), Gaps = 47/401 (11%)
Query: 253 PGSGRPTY--DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVR 310
P +P +++ + + R KL +W PFF + + GCFVR+GIG + P+YR+ +
Sbjct: 347 PPKSQPVSLPEELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAEIT 406
Query: 311 NVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERN 370
V E + Y+L T K L + GN+ R + VS+ E EF +W +
Sbjct: 407 GV--VETAKVYQLGGTRTNKGLQLRHGNDQRVFR--LEFVSNQEFTESEFMKWKEAMFSA 462
Query: 371 SGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEV 430
++P+ ++ +K+ SI++ + ++ ++++++EK+ P N A +K +L +E +
Sbjct: 463 GMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKAM 522
Query: 431 AQSRHDEVDMERIKKRLQELEASRDS----KVKDAKAIRLAEMNRKNRVENFKNASELKR 486
A+ D+ ++I+ +L ELE ++ + K+ AI + +N++NR N SE
Sbjct: 523 AEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAI--SYINQRNREWNIVE-SEKAL 579
Query: 487 VNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANGEEGATGEVG 546
V S DPF+RR KP T +N V + A G
Sbjct: 580 VAESHNMKNQQMDPFTRRQC--------KP----TIVSNSRDPAVQAAILAQLNAKYGSG 627
Query: 547 MAATEAALEAAAGAGKLVDTN--APLDLGTESNMLHDFELDISLNALKKFGGPQGVLAGF 604
+ +A E + G GK D N + DL + +HDF++ I L
Sbjct: 628 VLP-DAPKEMSKGQGKDKDLNSKSASDLSEDLFKVHDFDVKIDLQV-------------- 672
Query: 605 MARKQRIEATVGCQVPENDG--RRHALTLTVGDYKRRRGLL 643
+ + + A P DG RR +L + DYK+RRGL+
Sbjct: 673 PSSESKALAITSKAPPAKDGAPRR---SLNLEDYKKRRGLI 710
>gi|109080731|ref|XP_001100507.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Macaca
mulatta]
Length = 711
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 106/401 (26%), Positives = 183/401 (45%), Gaps = 47/401 (11%)
Query: 253 PGSGRPTY--DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVR 310
P +P +++ + + R KL +W PFF + + GCFVR+GIG + P+YR+ +
Sbjct: 348 PPKSQPVSLPEELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAEIT 407
Query: 311 NVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERN 370
V E + Y+L T K L + GN+ R + VS+ E EF +W +
Sbjct: 408 GV--VETAKVYQLGGTRTNKGLQLRHGNDQRVFR--LEFVSNQEFTESEFMKWKEAMFSA 463
Query: 371 SGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEV 430
++P+ ++ +K+ SI++ + ++ ++++++EK+ P N A +K +L +E +
Sbjct: 464 GMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKAM 523
Query: 431 AQSRHDEVDMERIKKRLQELEASRDS----KVKDAKAIRLAEMNRKNRVENFKNASELKR 486
A+ D+ ++I+ +L ELE ++ + K+ AI + +N++NR N SE
Sbjct: 524 AEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAI--SYINQRNREWNIVE-SEKAL 580
Query: 487 VNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANGEEGATGEVG 546
V S DPF+RR KP T +N V + A G
Sbjct: 581 VAESHNMKNQQMDPFTRRQC--------KP----TIVSNSRDPAVQAAILAQLNAKYGSG 628
Query: 547 MAATEAALEAAAGAGKLVDTN--APLDLGTESNMLHDFELDISLNALKKFGGPQGVLAGF 604
+ +A E + G GK D N + DL + +HDF++ I L
Sbjct: 629 VLP-DAPKEMSKGQGKDKDLNSKSASDLSEDLFKVHDFDVKIDLQV-------------- 673
Query: 605 MARKQRIEATVGCQVPENDG--RRHALTLTVGDYKRRRGLL 643
+ + + A P DG RR +L + DYK+RRGL+
Sbjct: 674 PSSESKALAITSKAPPAKDGAPRR---SLNLEDYKKRRGLI 711
>gi|390468716|ref|XP_002753567.2| PREDICTED: RNA polymerase-associated protein RTF1 homolog
[Callithrix jacchus]
gi|403289177|ref|XP_003935742.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Saimiri
boliviensis boliviensis]
gi|119612898|gb|EAW92492.1| Rtf1, Paf1/RNA polymerase II complex component, homolog (S.
cerevisiae), isoform CRA_c [Homo sapiens]
gi|168267242|dbj|BAG09677.1| RNA polymerase-associated protein RTF1 homolog [synthetic
construct]
Length = 670
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 106/401 (26%), Positives = 183/401 (45%), Gaps = 47/401 (11%)
Query: 253 PGSGRPTY--DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVR 310
P +P +++ + + R KL +W PFF + + GCFVR+GIG + P+YR+ +
Sbjct: 307 PPKSQPVSLPEELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAEIT 366
Query: 311 NVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERN 370
V E + Y+L T K L + GN+ R + VS+ E EF +W +
Sbjct: 367 GV--VETAKVYQLGGTRTNKGLQLRHGNDQRVFR--LEFVSNQEFTESEFMKWKEAMFSA 422
Query: 371 SGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEV 430
++P+ ++ +K+ SI++ + ++ ++++++EK+ P N A +K +L +E +
Sbjct: 423 GMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKAM 482
Query: 431 AQSRHDEVDMERIKKRLQELEASRDS----KVKDAKAIRLAEMNRKNRVENFKNASELKR 486
A+ D+ ++I+ +L ELE ++ + K+ AI + +N++NR N SE
Sbjct: 483 AEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAI--SYINQRNREWNIVE-SEKAL 539
Query: 487 VNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANGEEGATGEVG 546
V S DPF+RR KP T +N V + A G
Sbjct: 540 VAESHNMKNQQMDPFTRRQC--------KP----TIVSNSRDPAVQAAILAQLNAKYGSG 587
Query: 547 MAATEAALEAAAGAGKLVDTN--APLDLGTESNMLHDFELDISLNALKKFGGPQGVLAGF 604
+ +A E + G GK D N + DL + +HDF++ I L
Sbjct: 588 VLP-DAPKEMSKGQGKDKDLNSKSASDLSEDLFKVHDFDVKIDLQV-------------- 632
Query: 605 MARKQRIEATVGCQVPENDG--RRHALTLTVGDYKRRRGLL 643
+ + + A P DG RR +L + DYK+RRGL+
Sbjct: 633 PSSESKALAITSKAPPAKDGAPRR---SLNLEDYKKRRGLI 670
>gi|20521862|dbj|BAA13382.2| KIAA0252 [Homo sapiens]
Length = 702
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 106/401 (26%), Positives = 183/401 (45%), Gaps = 47/401 (11%)
Query: 253 PGSGRPTY--DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVR 310
P +P +++ + + R KL +W PFF + + GCFVR+GIG + P+YR+ +
Sbjct: 339 PPKSQPVSLPEELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAEIT 398
Query: 311 NVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERN 370
V E + Y+L T K L + GN+ R + VS+ E EF +W +
Sbjct: 399 GV--VETAKVYQLGGTRTNKGLQLRHGNDQRVFR--LEFVSNQEFTESEFMKWKEAMFSA 454
Query: 371 SGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEV 430
++P+ ++ +K+ SI++ + ++ ++++++EK+ P N A +K +L +E +
Sbjct: 455 GMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKAM 514
Query: 431 AQSRHDEVDMERIKKRLQELEASRDS----KVKDAKAIRLAEMNRKNRVENFKNASELKR 486
A+ D+ ++I+ +L ELE ++ + K+ AI + +N++NR N SE
Sbjct: 515 AEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAI--SYINQRNREWNIVE-SEKAL 571
Query: 487 VNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANGEEGATGEVG 546
V S DPF+RR KP T +N V + A G
Sbjct: 572 VAESHNMKNQQMDPFTRRQC--------KP----TIVSNSRDPAVQAAILAQLNAKYGSG 619
Query: 547 MAATEAALEAAAGAGKLVDTN--APLDLGTESNMLHDFELDISLNALKKFGGPQGVLAGF 604
+ +A E + G GK D N + DL + +HDF++ I L
Sbjct: 620 VLP-DAPKEMSKGQGKDKDLNSKSASDLSEDLFKVHDFDVKIDLQV-------------- 664
Query: 605 MARKQRIEATVGCQVPENDG--RRHALTLTVGDYKRRRGLL 643
+ + + A P DG RR +L + DYK+RRGL+
Sbjct: 665 PSSESKALAITSKAPPAKDGAPRR---SLNLEDYKKRRGLI 702
>gi|397512664|ref|XP_003826660.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase-associated protein
RTF1 homolog [Pan paniscus]
Length = 710
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 106/401 (26%), Positives = 183/401 (45%), Gaps = 47/401 (11%)
Query: 253 PGSGRPTY--DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVR 310
P +P +++ + + R KL +W PFF + + GCFVR+GIG + P+YR+ +
Sbjct: 347 PPKSQPVSLPEELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAEIT 406
Query: 311 NVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERN 370
V E + Y+L T K L + GN+ R + VS+ E EF +W +
Sbjct: 407 GV--VETAKVYQLGGTRTNKGLQLRHGNDQRVFR--LEFVSNQEFTESEFMKWKEAMFSA 462
Query: 371 SGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEV 430
++P+ ++ +K+ SI++ + ++ ++++++EK+ P N A +K +L +E +
Sbjct: 463 GMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKAM 522
Query: 431 AQSRHDEVDMERIKKRLQELEASRDS----KVKDAKAIRLAEMNRKNRVENFKNASELKR 486
A+ D+ ++I+ +L ELE ++ + K+ AI + +N++NR N SE
Sbjct: 523 AEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAI--SYINQRNREWNIVE-SEKAL 579
Query: 487 VNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANGEEGATGEVG 546
V S DPF+RR KP T +N V + A G
Sbjct: 580 VAESHNMKNQQMDPFTRRQC--------KP----TIVSNSRDPAVQAAILAQLNAKYGSG 627
Query: 547 MAATEAALEAAAGAGKLVDTN--APLDLGTESNMLHDFELDISLNALKKFGGPQGVLAGF 604
+ +A E + G GK D N + DL + +HDF++ I L
Sbjct: 628 VLP-DAPKEMSKGQGKDKDLNSKSASDLSEDLFKVHDFDVKIDLQV-------------- 672
Query: 605 MARKQRIEATVGCQVPENDG--RRHALTLTVGDYKRRRGLL 643
+ + + A P DG RR +L + DYK+RRGL+
Sbjct: 673 PSSESKALAITSKAPPAKDGAPRR---SLNLEDYKKRRGLI 710
>gi|115529001|gb|AAI17849.1| Rtf1 protein [Mus musculus]
gi|115529003|gb|AAI17850.1| Rtf1 protein [Mus musculus]
Length = 585
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 106/401 (26%), Positives = 183/401 (45%), Gaps = 47/401 (11%)
Query: 253 PGSGRPTY--DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVR 310
P +P +++ + + R KL +W PFF + + GCFVR+GIG + P+YR+ +
Sbjct: 222 PPKSQPVSLPEELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAEIT 281
Query: 311 NVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERN 370
V E + Y+L T K L + GN+ R + VS+ E EF +W +
Sbjct: 282 GV--VETAKVYQLGGTRTNKGLQLRHGNDQRVFR--LEFVSNQEFTESEFMKWKEAMFSA 337
Query: 371 SGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEV 430
++P+ ++ +K+ SI++ + ++ ++++++EK+ P N A +K +L +E +
Sbjct: 338 GMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKAM 397
Query: 431 AQSRHDEVDMERIKKRLQELEASRDS----KVKDAKAIRLAEMNRKNRVENFKNASELKR 486
A+ D+ ++I+ +L ELE ++ + K+ AI + +N++NR N SE
Sbjct: 398 AEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAI--SYINQRNREWNIVE-SEKAL 454
Query: 487 VNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANGEEGATGEVG 546
V S DPF+RR KP T +N V + A G
Sbjct: 455 VAESHNMRNQQMDPFTRRQC--------KP----TIVSNSRDPAVQAAILAQLNAKYGSG 502
Query: 547 MAATEAALEAAAGAGKLVDTNAPL--DLGTESNMLHDFELDISLNALKKFGGPQGVLAGF 604
+ +A E + G GK D N+ DL + +HDF++ I L
Sbjct: 503 VLP-DAPKEMSKGQGKDKDLNSKTASDLSEDLFKVHDFDVKIDLQV-------------- 547
Query: 605 MARKQRIEATVGCQVPENDG--RRHALTLTVGDYKRRRGLL 643
+ + + A P DG RR +L + DYK+RRGL+
Sbjct: 548 PSSESKALAITSKAPPAKDGAPRR---SLNLEDYKKRRGLI 585
>gi|149692456|ref|XP_001500906.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Equus
caballus]
Length = 696
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 179/391 (45%), Gaps = 45/391 (11%)
Query: 261 DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRS 320
+++ + + R KL +W PFF + + GCFVR+GIG + P+YR+ + V E +
Sbjct: 343 EELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAEITGV--VETAKV 400
Query: 321 YKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDV 380
Y+L T K L + GN+ R + VS+ E EF +W + ++P+ ++
Sbjct: 401 YQLGGTRTNKGLQLRHGNDQRVFR--LEFVSNQEFTESEFMKWKEAMFSAGMQLPTLDEI 458
Query: 381 LEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDM 440
+K+ SI++ + ++ ++++++EK+ P N A +K +L +E +A+ D+
Sbjct: 459 NKKELSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKAMAEDLGDQDKA 518
Query: 441 ERIKKRLQELEASRDS----KVKDAKAIRLAEMNRKNRVENFKNASELKRVNTSLKAGEA 496
++I+ +L ELE ++ + K+ AI + +N++NR N SE V S
Sbjct: 519 KQIQDQLNELEERAEALDRQRTKNISAI--SYINQRNREWNIVE-SEKALVAESHNMKNQ 575
Query: 497 GYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANGEEGATGEVGMAATEAALEA 556
DPF+RR + T +N V + A G+ +A E
Sbjct: 576 QMDPFTRRQCKP------------TIVSNSRDPAVQAAILAQLNAKYGSGVLP-DAPKEM 622
Query: 557 AAGAGKLVDTN--APLDLGTESNMLHDFELDISLNALKKFGGPQGVLAGFMARKQRIEAT 614
+ G GK D N + DL + +HDF++ I L + + + A
Sbjct: 623 SKGQGKDKDLNSKSASDLSEDLFKVHDFDVKIDLQV--------------PSSESKALAI 668
Query: 615 VGCQVPENDG--RRHALTLTVGDYKRRRGLL 643
P DG RR +L + DYK+RRGL+
Sbjct: 669 TSKAPPAKDGAPRR---SLNLEDYKKRRGLI 696
>gi|308449865|ref|XP_003088103.1| hypothetical protein CRE_23269 [Caenorhabditis remanei]
gi|308249550|gb|EFO93502.1| hypothetical protein CRE_23269 [Caenorhabditis remanei]
Length = 604
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 110/362 (30%), Positives = 175/362 (48%), Gaps = 42/362 (11%)
Query: 259 TYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGR-SKNGPIYRLCMVRNVDATEP 317
T ++++ + R KLA PFF+ +VGC+VR+G G S + YR+ + V+ T
Sbjct: 254 TLAELRKARLSRHKLALMIHAPFFDSTVVGCYVRLGQGMISGSQSKYRIWKIIGVEQT-- 311
Query: 318 DRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSK 377
++ Y LE + T K + +G S ++M VS+S + EF +W R + G +P+
Sbjct: 312 NKVYDLEGKKTNKSIKCQFGR--SERPFRMQFVSNSEFEQVEFDEW-RNATKAQGSVPT- 367
Query: 378 QDVLEKKES-IQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHD 436
D++EKK S I+K YS V M++EK N A K L ++ E+AQ R D
Sbjct: 368 VDIMEKKHSDIEKAINHKYSDKEVDLMIKEKSKFQKVTRNFAMTKAGLSKQKELAQQRGD 427
Query: 437 EVDMERIKKRLQELEASRDSKVKD-AKAIR-LAEMNRKNRVENFKNASELKRVNTSLKAG 494
+ ER++K + E+E D K+ +K+IR +A +N +NR + K+ + ++ LK
Sbjct: 428 IREAERVQKEIDEIERHADELDKERSKSIRAIAFINHRNRTQ-IKD----QVLSGKLKIE 482
Query: 495 EAGY-DPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANGEEGATGEVGMAATEAA 553
E+ DPF+R+ K G V + + +G A+ +EA
Sbjct: 483 ESSQDDPFTRK----------KGGMRVVSGSKSKLDGKLSAASSNNN--------LSEAG 524
Query: 554 LEAAAGAGK--LVDTNAPLDLGTESNM--LHDFELDISLNALKKFGGPQ----GVLAGFM 605
+A + A K L P+ + M LHDF+LDI L+ LK G Q V+ G
Sbjct: 525 KDAPSSAPKSTLPPPAKPIGMKKPPVMSSLHDFDLDIDLDKLKNVGEEQAARRAVIGGAA 584
Query: 606 AR 607
AR
Sbjct: 585 AR 586
>gi|15929205|gb|AAH15052.1| Rtf1, Paf1/RNA polymerase II complex component, homolog (S.
cerevisiae) [Homo sapiens]
gi|158258036|dbj|BAF84991.1| unnamed protein product [Homo sapiens]
Length = 585
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 106/401 (26%), Positives = 183/401 (45%), Gaps = 47/401 (11%)
Query: 253 PGSGRPTY--DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVR 310
P +P +++ + + R KL +W PFF + + GCFVR+GIG + P+YR+ +
Sbjct: 222 PPKSQPVSLPEELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAEIT 281
Query: 311 NVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERN 370
V E + Y+L T K L + GN+ R + VS+ E EF +W +
Sbjct: 282 GV--VETAKVYQLGGTRTNKGLQLRHGNDQRVFR--LEFVSNQEFTESEFMKWKEAMFSA 337
Query: 371 SGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEV 430
++P+ ++ +K+ SI++ + ++ ++++++EK+ P N A +K +L +E +
Sbjct: 338 GMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKAM 397
Query: 431 AQSRHDEVDMERIKKRLQELEASRDS----KVKDAKAIRLAEMNRKNRVENFKNASELKR 486
A+ D+ ++I+ +L ELE ++ + K+ AI + +N++NR N SE
Sbjct: 398 AEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAI--SYINQRNREWNIVE-SEKAL 454
Query: 487 VNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANGEEGATGEVG 546
V S DPF+RR KP T +N V + A G
Sbjct: 455 VAESHNMKNQQMDPFTRRQC--------KP----TIVSNSRDPAVQAAILAQLNAKYGSG 502
Query: 547 MAATEAALEAAAGAGKLVDTN--APLDLGTESNMLHDFELDISLNALKKFGGPQGVLAGF 604
+ +A E + G GK D N + DL + +HDF++ I L
Sbjct: 503 VLP-DAPKEMSKGQGKDKDLNSKSASDLSEDLFKVHDFDVKIDLQV-------------- 547
Query: 605 MARKQRIEATVGCQVPENDG--RRHALTLTVGDYKRRRGLL 643
+ + + A P DG RR +L + DYK+RRGL+
Sbjct: 548 PSSESKALAITSKAPPAKDGAPRR---SLNLEDYKKRRGLI 585
>gi|410961475|ref|XP_003987308.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Felis
catus]
Length = 585
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 106/401 (26%), Positives = 183/401 (45%), Gaps = 47/401 (11%)
Query: 253 PGSGRPTY--DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVR 310
P +P +++ + + R KL +W PFF + + GCFVR+GIG + P+YR+ +
Sbjct: 222 PPKSQPVSLPEELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAEIT 281
Query: 311 NVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERN 370
V E + Y+L T K L + GN+ R + VS+ E EF +W +
Sbjct: 282 GV--VETAKVYQLGGTRTNKGLQLRHGNDQRVFR--LEFVSNQEFTESEFMKWKEAMFSA 337
Query: 371 SGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEV 430
++P+ ++ +K+ SI++ + ++ ++++++EK+ P N A +K +L +E +
Sbjct: 338 GMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKAM 397
Query: 431 AQSRHDEVDMERIKKRLQELEASRDS----KVKDAKAIRLAEMNRKNRVENFKNASELKR 486
A+ D+ ++I+ +L ELE ++ + K+ AI + +N++NR N SE
Sbjct: 398 AEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAI--SYINQRNREWNIVE-SEKAL 454
Query: 487 VNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANGEEGATGEVG 546
V S DPF+RR KP T +N V + A G
Sbjct: 455 VAESHNMKNQQMDPFTRRQC--------KP----TIVSNSRDPAVQAAILAQLNAKYGSG 502
Query: 547 MAATEAALEAAAGAGKLVDTN--APLDLGTESNMLHDFELDISLNALKKFGGPQGVLAGF 604
+ +A E + G GK D N + DL + +HDF++ I L
Sbjct: 503 VLP-DAPKEMSKGQGKDKDLNSKSASDLSEDLFKVHDFDVKIDLQV-------------- 547
Query: 605 MARKQRIEATVGCQVPENDG--RRHALTLTVGDYKRRRGLL 643
+ + + A P DG RR +L + DYK+RRGL+
Sbjct: 548 PSSESKALAITSKAPPAKDGAPRR---SLNLEDYKKRRGLI 585
>gi|392560249|gb|EIW53432.1| plus-3-domain-containing protein [Trametes versicolor FP-101664
SS1]
Length = 526
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 129/508 (25%), Positives = 238/508 (46%), Gaps = 63/508 (12%)
Query: 93 EGDSSNESDDDNHGQMTELEREMMIFERDDKKVDKNLRDKFRSRREERSTRSTKETPPLP 152
EG NE+D +M+E++RE + +R ++ + + + + ++ R E
Sbjct: 65 EGKYINEADRARLMEMSEIDREATLAQRQEEMQRYTDKRQLENMLKMQNGRGDTE----- 119
Query: 153 SSRSARLAARSADRAAAKDDA--LNELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSPVK 210
S S + A R A K+ + L+EL+AKR K +D E R +R SP +
Sbjct: 120 ESVSKAAKRQHAVRGATKEKSRKLDELKAKR-KAKD-EKKR-----------TRTSSPKR 166
Query: 211 RKAFTPAGLSSSSQSESESRSHSDDEGSTGDGGMADSDDDGAPGSGRPTYDDIKEITIRR 270
++ +P + S E + D+E S+ D P + +D+ + + R
Sbjct: 167 DRSSSPMDMDMSEDEEDGQITKYDEEEERDRKLYGKSNPDDEPIN----LEDLNKCRVTR 222
Query: 271 SKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRSYKLENRTTCK 330
+++AK M P+FE+ I G +VR IG+ N P+YR+C V ++ A + YK+ ++T +
Sbjct: 223 NQIAKLCMAPWFEDYIKGGWVRYLIGQENNQPVYRICEVADI-APNLVKPYKINDQTVNQ 281
Query: 331 YLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKESIQKI 390
L + G S R+ M VS++P ++EF++ ++ E ++P+K+ + K ++K+
Sbjct: 282 ELELKHGE--STRRFAMDKVSNAPFEQKEFERLVKVCEAEKVKLPTKRQIERKAAQLEKL 339
Query: 391 NTFVYSAATVKQMLQEKKSASSRP---LNVAAEKDRLRRELEVAQSRHDEVDMERIKKRL 447
+ + + ML K++ + + +A E+ RL + +A R D ++ I +L
Sbjct: 340 ANQQMTESDIAAMLARKQTMQTSKQSGIAMAMERSRLMQARTLAVRRQDYTEVAEIDAQL 399
Query: 448 QELEASRDSKVKDAKAIRLAEMNRKNRVEN---FKNA--SEL--KRVNTSLKAGEAGYDP 500
EL +R+S+ +++ + LA +N +NR N + A +EL KR +L+AG A
Sbjct: 400 GELAPARESQREESSSDVLARLNERNRKANQDAVRKAERAELDRKRRERTLRAGTA---- 455
Query: 501 FSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGG--ANGEEGATGEVGMAATEAALEAAA 558
+S + A+ G + G PG ANGE V +++AA A
Sbjct: 456 ---------TPTLSDAAGRLRAKMLGSRPGTPGAPLANGEADTPRSVS-PSSDAAPTKIA 505
Query: 559 GAGKLVDTNAPLDLGTESNMLHDFELDI 586
+G L E+++L E+D+
Sbjct: 506 KSG----------LSFEASLLQSVEIDL 523
>gi|157822517|ref|NP_001102428.1| RNA polymerase-associated protein RTF1 homolog [Rattus norvegicus]
gi|149023028|gb|EDL79922.1| Rtf1, Paf1/RNA polymerase II complex component, homolog (S.
cerevisiae) (predicted) [Rattus norvegicus]
Length = 429
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 105/391 (26%), Positives = 180/391 (46%), Gaps = 45/391 (11%)
Query: 261 DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRS 320
+++ + + R KL +W PFF + + GCFVR+GIG + P+YR+ + V E +
Sbjct: 76 EELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAEITGV--VETAKV 133
Query: 321 YKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDV 380
Y+L T K L + GN+ R + VS+ E EF +W + ++P+ ++
Sbjct: 134 YQLGGTRTNKGLQLRHGNDQRVFR--LEFVSNQEFTESEFMKWKEAMFSAGMQLPTLDEI 191
Query: 381 LEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDM 440
+K+ SI++ + ++ ++++++EK+ P N A +K +L +E +A+ D+
Sbjct: 192 NKKEFSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKAMAEDLGDQDKA 251
Query: 441 ERIKKRLQELEASRDS----KVKDAKAIRLAEMNRKNRVENFKNASELKRVNTSLKAGEA 496
++I+ +L ELE ++ + K+ AI + +N++NR N SE V S
Sbjct: 252 KQIQDQLNELEERAEALDRQRTKNISAI--SYINQRNREWNIVE-SEKALVAESHNMRNQ 308
Query: 497 GYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANGEEGATGEVGMAATEAALEA 556
DPF+RR KP T +N V + A G A +A E
Sbjct: 309 QMDPFTRRQC--------KP----TIVSNSRDPAVQAAILAQLNAKYGSG-ALPDAPKEV 355
Query: 557 AAGAGKLVDTN--APLDLGTESNMLHDFELDISLNALKKFGGPQGVLAGFMARKQRIEAT 614
+ G GK D N + DL + +HDF++ I L + + + A
Sbjct: 356 SKGQGKDKDLNSKSASDLSEDLFKVHDFDVKIDLQV--------------PSSESKALAI 401
Query: 615 VGCQVPENDG--RRHALTLTVGDYKRRRGLL 643
P DG RR +L + DYK+RRGL+
Sbjct: 402 TSKAPPAKDGAPRR---SLNLEDYKKRRGLI 429
>gi|281338210|gb|EFB13794.1| hypothetical protein PANDA_001051 [Ailuropoda melanoleuca]
Length = 695
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/399 (25%), Positives = 184/399 (46%), Gaps = 35/399 (8%)
Query: 253 PGSGRPTY--DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVR 310
P +P +++ + + R KL +W PFF + + GCFVR+GIG + P+YR+ +
Sbjct: 324 PPKSQPVSLPEELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAEIT 383
Query: 311 NVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERN 370
V E + Y+L T K L + GN+ R + VS+ E EF +W +
Sbjct: 384 GV--VETAKVYQLGGTRTNKGLQLRHGNDQRVFR--LEFVSNQEFTESEFMKWKEAMFSA 439
Query: 371 SGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEV 430
++P+ ++ +K+ SI++ + ++ ++++++EK+ P N A +K +L +E +
Sbjct: 440 GMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKAM 499
Query: 431 AQSRHDEVDMERIKKRLQELEASRDS----KVKDAKAIRLAEMNRKNRVENFKNASELKR 486
A+ D+ ++I+ +L ELE ++ + K+ AI + +N++NR N SE
Sbjct: 500 AEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAI--SYINQRNREWNIVE-SEKAL 556
Query: 487 VNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANGEEGATGEVG 546
V S DPF+RR + + +S + A + G+ A E+
Sbjct: 557 VAESHNMKNQQMDPFTRR--QCKPTIVSNSRDPAVQAAILAQLNAKYGSGVLPDAPKEMS 614
Query: 547 MAATEAALEAAAGAGKLVDTNAPLDLGTESNMLHDFELDISLNALKKFGGPQGVLAGFMA 606
A L+ G K +++ + DL + +HDF++ I L +
Sbjct: 615 KAIFLFTLQ-GQGKDKDLNSKSASDLSEDLFKVHDFDVKIDLQV--------------PS 659
Query: 607 RKQRIEATVGCQVPENDG--RRHALTLTVGDYKRRRGLL 643
+ + A P DG RR +L + DYK+RRGL+
Sbjct: 660 SESKALAITSKAPPAKDGAPRR---SLNLEDYKKRRGLI 695
>gi|213410467|ref|XP_002176003.1| RNA polymerase-associated protein Rtf1 [Schizosaccharomyces
japonicus yFS275]
gi|212004050|gb|EEB09710.1| RNA polymerase-associated protein Rtf1 [Schizosaccharomyces
japonicus yFS275]
Length = 541
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 125/500 (25%), Positives = 220/500 (44%), Gaps = 92/500 (18%)
Query: 1 MADLENLLLEAAGRTNSAGRNRHSASSSKRRR-----------EGSYSGSDSRDDDSDDN 49
MAD ++ LL AG +S SS R+R ++ D ++ DN
Sbjct: 1 MADFQDELLALAGVDDSLN------SSKSRKRALDNSDDSFSDSDEEHNNELNDFEASDN 54
Query: 50 RGYGSRKPSGSQVPLKKRLDPAERDDDQGSQEEGDYDGGASEH----EGDSSNESDDDNH 105
GY E DD++ + EE + A E+ EG +E D
Sbjct: 55 EGY-------------------EEDDEKNTYEE---ELLAFENPYRLEGKFRDEEDRARL 92
Query: 106 GQMTELEREMMIFERDDKKVDKN----LRDKFRSRREERSTRSTKETPPLPSSRSARLAA 161
MTE+ERE +++ER+++ N L + R ++E+ S S + RS R
Sbjct: 93 MAMTEVERESILYEREEEIAKLNERRELAVRLRKQKEQYSQTSAR--------RSTR--E 142
Query: 162 RSADRAAAKDDALNELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSPVKRKAFTPAGLSS 221
+ A K D L EL+ +R ++ S ++ RK T S+
Sbjct: 143 KLTSETAGKRDKLTELKKRRQER------------------SNKVNTSARKEVTEKAYST 184
Query: 222 SSQSESESRSHSDDEGSTGDGGMADSDDDGAPGSGRPTYDDIKEITIRRSKLAKWFMEPF 281
S S S SD + ++ T DD+ I + R + K+ P
Sbjct: 185 SEDEASYSEQESDAYSEGYSPRIVET-------QSAVTLDDVNTIRLGRKHIVKYMFHPL 237
Query: 282 FEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESS 341
FE VGCFVRV IG +YRLC ++ + ++ ++Y++E T L T G
Sbjct: 238 FESCTVGCFVRVKIGERHGESVYRLCQIKGI--SKGKKAYRVEGSLTNVMLECTHGRYRR 295
Query: 342 AARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKESIQKINTFVYSAATVK 401
A + ++++S+ P + +F +W ++E + R P K + E +Q++ +++ + V
Sbjct: 296 A--FDISVLSNEPFSQHDFDRWQHQLEEDHLRPPRKDFFKKHLEGLQRMASYILNDTEVS 353
Query: 402 QMLQEKKSASSRPLNVAAEKD--RLRRELEVAQSRHDEVDMERIKKRLQEL-EASRDSKV 458
++++ K+ S P N++AEK R++R+ +A ++ D V + + +RL L E S S+
Sbjct: 354 EVVRIKRELSRIPSNISAEKTNLRMKRQAALAANQMDLV--QELDERLNTLEELSMGSRP 411
Query: 459 KDAKAI-RLAEMNRKNRVEN 477
+ +L+++N +NR +N
Sbjct: 412 NGTSTLDQLSKVNERNRRKN 431
>gi|380799507|gb|AFE71629.1| RNA polymerase-associated protein RTF1 homolog, partial [Macaca
mulatta]
gi|380799509|gb|AFE71630.1| RNA polymerase-associated protein RTF1 homolog, partial [Macaca
mulatta]
gi|380799511|gb|AFE71631.1| RNA polymerase-associated protein RTF1 homolog, partial [Macaca
mulatta]
gi|380799513|gb|AFE71632.1| RNA polymerase-associated protein RTF1 homolog, partial [Macaca
mulatta]
Length = 479
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 106/401 (26%), Positives = 183/401 (45%), Gaps = 47/401 (11%)
Query: 253 PGSGRPTY--DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVR 310
P +P +++ + + R KL +W PFF + + GCFVR+GIG + P+YR+ +
Sbjct: 116 PPKSQPVSLPEELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAEIT 175
Query: 311 NVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERN 370
V E + Y+L T K L + GN+ R + VS+ E EF +W +
Sbjct: 176 GV--VETAKVYQLGGTRTNKGLQLRHGNDQRVFR--LEFVSNQEFTESEFMKWKEAMFSA 231
Query: 371 SGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEV 430
++P+ ++ +K+ SI++ + ++ ++++++EK+ P N A +K +L +E +
Sbjct: 232 GMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKAM 291
Query: 431 AQSRHDEVDMERIKKRLQELEASRDS----KVKDAKAIRLAEMNRKNRVENFKNASELKR 486
A+ D+ ++I+ +L ELE ++ + K+ AI + +N++NR N SE
Sbjct: 292 AEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAI--SYINQRNREWNIVE-SEKAL 348
Query: 487 VNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANGEEGATGEVG 546
V S DPF+RR KP T +N V + A G
Sbjct: 349 VAESHNMKNQQMDPFTRRQC--------KP----TIVSNSRDPAVQAAILAQLNAKYGSG 396
Query: 547 MAATEAALEAAAGAGKLVDTN--APLDLGTESNMLHDFELDISLNALKKFGGPQGVLAGF 604
+ +A E + G GK D N + DL + +HDF++ I L
Sbjct: 397 VLP-DAPKEMSKGQGKDKDLNSKSASDLSEDLFKVHDFDVKIDLQV-------------- 441
Query: 605 MARKQRIEATVGCQVPENDG--RRHALTLTVGDYKRRRGLL 643
+ + + A P DG RR +L + DYK+RRGL+
Sbjct: 442 PSSESKALAITSKAPPAKDGAPRR---SLNLEDYKKRRGLI 479
>gi|393912272|gb|EJD76662.1| hypothetical protein LOAG_16424 [Loa loa]
Length = 721
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 107/402 (26%), Positives = 185/402 (46%), Gaps = 48/402 (11%)
Query: 262 DIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNG-PIYRLCMVRNVDATEPDRS 320
D+ I + R K++K PFF + ++GCFVR+GIGR+K G +YR + +D E +
Sbjct: 348 DLSRIRLSRFKISKIVHAPFFNKTVIGCFVRIGIGRNKEGRSVYRAAQI--LDVVETAKV 405
Query: 321 YKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDV 380
Y+LEN T K L + G E +++ VS+S EF +W ++ N+ + + V
Sbjct: 406 YQLENTRTNKGLKLKHGEEERV--YRLEFVSNSEFTSHEFNKWYDAMKSNNLAILTIDQV 463
Query: 381 LEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKD---RLRRELE----VAQS 433
+K+ IQK + Y+ ++ M+QEK PLN A EK +L++E E V +
Sbjct: 464 EKKEADIQKAVNYNYTDKDIELMVQEKMRFQKAPLNYALEKGNLIKLKQEAEQYGNVEEV 523
Query: 434 RHDEVDMERIKKRLQELEASRDSKVKDAKAIR-LAEMNRKNRVENFKNASELKRVNTSLK 492
+ ++ ++ ++ R ELE R +++IR ++ +N++NR + K+A +V+
Sbjct: 524 QILQLQIDDLEARAAELERRR------SQSIRGISWINQRNR-QAIKDAILSGQVHIETS 576
Query: 493 AGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANGEEGA------TGEVG 546
+ + DPF+R+ R + PG + + +K N E A E+
Sbjct: 577 SQD---DPFTRKNARMKPV----PGRDKMTQQLNEKRDANASNNDEYCAPSSQSIVTELN 629
Query: 547 MAATEAALEAAAGAGKLVDTNAPLDLGTESNMLHDFELDISLNALKKF--GGPQGVLAGF 604
+ EA + G + DL N D ++DI++ A P
Sbjct: 630 DQKLSSQKEAVSAVGARSSSGPVSDLFNAHNF--DVDIDIAIPAAMTLSSSAPSFTSVDV 687
Query: 605 MARKQRI---EATVGCQVPENDGRRHALTLTVGDYKRRRGLL 643
+R + +T+ N G L+L DYKRR+ +L
Sbjct: 688 NSRHSGLGSNRSTI------NRGSSRPLSLE--DYKRRKNML 721
>gi|344241159|gb|EGV97262.1| RNA polymerase-associated protein RTF1-like [Cricetulus griseus]
Length = 585
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 106/401 (26%), Positives = 182/401 (45%), Gaps = 47/401 (11%)
Query: 253 PGSGRPTY--DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVR 310
P +P +++ + + R KL +W PFF + + GCFVR+GIG + P+YR+ +
Sbjct: 222 PPKSQPVSLPEELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAEIT 281
Query: 311 NVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERN 370
V E + Y+L T K L + GN+ R + VS+ E EF +W +
Sbjct: 282 GV--VETAKVYQLGGTRTNKGLQLRHGNDQRVFR--LEFVSNQEFTESEFMKWKEAMFSA 337
Query: 371 SGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEV 430
++P+ ++ +K+ SI+ + ++ ++++++EK+ P N A +K +L +E +
Sbjct: 338 GMQLPTLDEINKKELSIKDALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKAM 397
Query: 431 AQSRHDEVDMERIKKRLQELEASRDS----KVKDAKAIRLAEMNRKNRVENFKNASELKR 486
A+ D+ ++I+ +L ELE ++ + K+ AI + +N++NR N SE
Sbjct: 398 AEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAI--SYINQRNREWNIVE-SEKAL 454
Query: 487 VNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANGEEGATGEVG 546
V S DPF+RR KP T +N V + A G
Sbjct: 455 VAESHNMKNQQMDPFTRRQC--------KP----TIVSNSRDPAVQAAILAQLNAKYGSG 502
Query: 547 MAATEAALEAAAGAGKLVDTN--APLDLGTESNMLHDFELDISLNALKKFGGPQGVLAGF 604
+ +A E + G GK D N + DL + +HDF++ I L
Sbjct: 503 VLP-DAPKEMSKGQGKDKDLNSKSASDLSEDLFKVHDFDVKIDLQV-------------- 547
Query: 605 MARKQRIEATVGCQVPENDG--RRHALTLTVGDYKRRRGLL 643
+ + + A P DG RR +L + DYK+RRGL+
Sbjct: 548 PSSESKALAITSKAPPAKDGAPRR---SLNLEDYKKRRGLI 585
>gi|395527813|ref|XP_003766032.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog
[Sarcophilus harrisii]
Length = 713
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 192/404 (47%), Gaps = 51/404 (12%)
Query: 252 APGSGRPTY--DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMV 309
P +P +D+ + + R KL +W PFF + ++GCFVR+GIG + P+Y++ +
Sbjct: 349 VPPKSQPVSLPEDLNRVRLSRHKLERWCHMPFFAKTVIGCFVRIGIGNYNSKPVYQVAEI 408
Query: 310 RNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVER 369
+V E + Y+L T K L + +GN+ R + VS+ + EF +W +EV
Sbjct: 409 TSV--VETAKVYQLGGTRTNKGLQLRYGNDQLVFR--LEFVSNQEFTKSEFMKW-KEVMF 463
Query: 370 NSG-RMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRREL 428
++G ++P+ ++ +K+ SI++ + ++ ++++++EK+ P N A +K +L +E
Sbjct: 464 SAGMQLPTLDEINKKEVSIKEALNYKFNDQDIEKIVKEKERFRKAPPNYAMKKMQLLKEK 523
Query: 429 EVAQSRHDEVDMERIKKRLQELEASRDS----KVKDAKAIRLAEMNRKNRVENFKNASE- 483
+A+ D+ ++I+ +L ELE ++ + K+ AI +N++NR N + +
Sbjct: 524 AMAEDVGDQDKAKQIQHQLNELEERAEALDRQRTKNISAINY--INQRNREWNIVESQKA 581
Query: 484 LKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANGEEGATG 543
L N ++K + DPF RR KP T +N V + A
Sbjct: 582 LVAENHNMKNQKM--DPFIRRHC--------KP----TIVSNSRNPAVQAARLAQLNAKY 627
Query: 544 EVGMAATEAALEAAAGAGKLVDTN--APLDLGTESNMLHDFELDISLNALKKFGGPQGVL 601
G A +A E G G+ D N + DL + +HDF++ I F P
Sbjct: 628 GSG-ALPDAPKEMNKGQGRDKDANSKSASDLSEDLFKVHDFDVKID------FQVP---- 676
Query: 602 AGFMARKQRIEATVGCQVPENDG--RRHALTLTVGDYKRRRGLL 643
+ + + A P DG RR +L + DYK+RRG +
Sbjct: 677 ----SSESKTLAITSKAPPAKDGAPRR---SLNLEDYKKRRGFI 713
>gi|345493971|ref|XP_001601558.2| PREDICTED: RNA polymerase-associated protein Rtf1-like [Nasonia
vitripennis]
Length = 657
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 131/257 (50%), Gaps = 10/257 (3%)
Query: 259 TYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPD 318
T +D+ +I + R K+ ++ PFFE + GCFVR+GIG + P+YR+ + V E
Sbjct: 347 TKEDLNKIRLSRHKIERFVHLPFFERVAQGCFVRIGIGNNNGRPVYRVAEISGV--CETA 404
Query: 319 RSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQ 378
+ Y+L N T K L + G + R + VS+ E EF +W MP+ +
Sbjct: 405 KIYQLGNTKTNKGLKLRHGAQERVFR--LEFVSNQEFTESEFFKWKETCALQGISMPTSE 462
Query: 379 DVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEV 438
++ +K + I++ + + +++++QEK P N A +K +L RE + A R D+
Sbjct: 463 EMDQKLKDIKEAMVYEFKEEDIEKIVQEKGRFKGTPYNYAMKKAQLMRERDAANCRGDDE 522
Query: 439 DMERIKKRLQELE--ASRDSKVKDAKAIRLAEMNRKNRVENFKNASELKRVNTSLKA--G 494
R+ + ELE AS K + A ++ +N +NR +N + A K + +KA G
Sbjct: 523 TASRLNIEISELEERASDLDKKRSATISSISYINDRNRKKNVEEAE--KAILEEIKANRG 580
Query: 495 EAGYDPFSRRWTRSRNY 511
+ DPF+RR TR + +
Sbjct: 581 KVVDDPFTRRSTRPKMF 597
>gi|308458419|ref|XP_003091551.1| hypothetical protein CRE_02690 [Caenorhabditis remanei]
gi|308256447|gb|EFP00400.1| hypothetical protein CRE_02690 [Caenorhabditis remanei]
Length = 604
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 110/362 (30%), Positives = 174/362 (48%), Gaps = 42/362 (11%)
Query: 259 TYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGR-SKNGPIYRLCMVRNVDATEP 317
T ++++ + R KLA PFF+ +VGC+VR+G G S + YR+ + V+ T
Sbjct: 254 TLAELRKARLSRHKLALMIHAPFFDSTVVGCYVRLGQGMISGSQSKYRIWKIIGVEQT-- 311
Query: 318 DRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSK 377
++ Y LE + T K + +G S ++M VS+S + EF +W R + G +P+
Sbjct: 312 NKVYDLEGKKTNKSIKCQFGR--SERPFRMQFVSNSEFEQVEFDEW-RNATKAQGSVPT- 367
Query: 378 QDVLEKKES-IQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHD 436
D++EKK S I+K YS V M++EK N A K L ++ E+AQ R D
Sbjct: 368 VDIMEKKHSDIEKAINHKYSDKEVDLMIKEKSKFQKVTRNFAMTKAGLSKQKELAQQRGD 427
Query: 437 EVDMERIKKRLQELEASRDSKVKD-AKAIR-LAEMNRKNRVENFKNASELKRVNTSLKAG 494
+ ER++K + E+E D K+ +K+IR +A +N +NR + K+ + ++ LK
Sbjct: 428 IREAERVQKEIDEIERHADELDKERSKSIRAIAFINHRNRTQ-IKD----QVLSGKLKIE 482
Query: 495 EAGY-DPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANGEEGATGEVGMAATEAA 553
E DPF+R+ K G V + + +G A+ +EA
Sbjct: 483 ENSQDDPFTRK----------KGGMRVVSGSKSKLDGKLSAASSNNN--------LSEAG 524
Query: 554 LEAAAGAGK--LVDTNAPLDLGTESNM--LHDFELDISLNALKKFGGPQ----GVLAGFM 605
+A + A K L P+ + M LHDF+LDI L+ LK G Q V+ G
Sbjct: 525 KDAPSSAPKSTLPPPAKPMGMKKPPVMSSLHDFDLDIDLDKLKNVGEEQAARRAVIGGAA 584
Query: 606 AR 607
AR
Sbjct: 585 AR 586
>gi|354471823|ref|XP_003498140.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog
[Cricetulus griseus]
Length = 709
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 104/391 (26%), Positives = 179/391 (45%), Gaps = 45/391 (11%)
Query: 261 DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRS 320
+++ + + R KL +W PFF + + GCFVR+GIG + P+YR+ + V E +
Sbjct: 356 EELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAEITGV--VETAKV 413
Query: 321 YKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDV 380
Y+L T K L + GN+ R + VS+ E EF +W + ++P+ ++
Sbjct: 414 YQLGGTRTNKGLQLRHGNDQRVFR--LEFVSNQEFTESEFMKWKEAMFSAGMQLPTLDEI 471
Query: 381 LEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDM 440
+K+ SI+ + ++ ++++++EK+ P N A +K +L +E +A+ D+
Sbjct: 472 NKKELSIKDALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKAMAEDLGDQDKA 531
Query: 441 ERIKKRLQELEASRDS----KVKDAKAIRLAEMNRKNRVENFKNASELKRVNTSLKAGEA 496
++I+ +L ELE ++ + K+ AI + +N++NR N SE V S
Sbjct: 532 KQIQDQLNELEERAEALDRQRTKNISAI--SYINQRNREWNIVE-SEKALVAESHNMKNQ 588
Query: 497 GYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANGEEGATGEVGMAATEAALEA 556
DPF+RR KP T +N V + A G+ +A E
Sbjct: 589 QMDPFTRRQC--------KP----TIVSNSRDPAVQAAILAQLNAKYGSGVLP-DAPKEM 635
Query: 557 AAGAGKLVDTN--APLDLGTESNMLHDFELDISLNALKKFGGPQGVLAGFMARKQRIEAT 614
+ G GK D N + DL + +HDF++ I L + + + A
Sbjct: 636 SKGQGKDKDLNSKSASDLSEDLFKVHDFDVKIDLQV--------------PSSESKALAI 681
Query: 615 VGCQVPENDG--RRHALTLTVGDYKRRRGLL 643
P DG RR +L + DYK+RRGL+
Sbjct: 682 TSKAPPAKDGAPRR---SLNLEDYKKRRGLI 709
>gi|119612896|gb|EAW92490.1| Rtf1, Paf1/RNA polymerase II complex component, homolog (S.
cerevisiae), isoform CRA_a [Homo sapiens]
Length = 429
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 106/401 (26%), Positives = 183/401 (45%), Gaps = 47/401 (11%)
Query: 253 PGSGRPTY--DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVR 310
P +P +++ + + R KL +W PFF + + GCFVR+GIG + P+YR+ +
Sbjct: 66 PPKSQPVSLPEELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAEIT 125
Query: 311 NVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERN 370
V E + Y+L T K L + GN+ R + VS+ E EF +W +
Sbjct: 126 GV--VETAKVYQLGGTRTNKGLQLRHGNDQRVFR--LEFVSNQEFTESEFMKWKEAMFSA 181
Query: 371 SGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEV 430
++P+ ++ +K+ SI++ + ++ ++++++EK+ P N A +K +L +E +
Sbjct: 182 GMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKAM 241
Query: 431 AQSRHDEVDMERIKKRLQELEASRDS----KVKDAKAIRLAEMNRKNRVENFKNASELKR 486
A+ D+ ++I+ +L ELE ++ + K+ AI + +N++NR N SE
Sbjct: 242 AEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAI--SYINQRNREWNIVE-SEKAL 298
Query: 487 VNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANGEEGATGEVG 546
V S DPF+RR KP T +N V + A G
Sbjct: 299 VAESHNMKNQQMDPFTRRQC--------KP----TIVSNSRDPAVQAAILAQLNAKYGSG 346
Query: 547 MAATEAALEAAAGAGKLVDTN--APLDLGTESNMLHDFELDISLNALKKFGGPQGVLAGF 604
+ +A E + G GK D N + DL + +HDF++ I L
Sbjct: 347 VLP-DAPKEMSKGQGKDKDLNSKSASDLSEDLFKVHDFDVKIDLQV-------------- 391
Query: 605 MARKQRIEATVGCQVPENDG--RRHALTLTVGDYKRRRGLL 643
+ + + A P DG RR +L + DYK+RRGL+
Sbjct: 392 PSSESKALAITSKAPPAKDGAPRR---SLNLEDYKKRRGLI 429
>gi|402874039|ref|XP_003900854.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Papio
anubis]
Length = 710
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 105/401 (26%), Positives = 183/401 (45%), Gaps = 47/401 (11%)
Query: 253 PGSGRPTY--DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVR 310
P +P +++ + + R KL +W PFF + + GCFVR+GIG + P+YR+ +
Sbjct: 347 PPKSQPVSLPEELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAEIT 406
Query: 311 NVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERN 370
V E + Y+L T K L + G++ R + VS+ E EF +W +
Sbjct: 407 GV--VETAKVYQLGGTRTNKGLQLRHGSDQRVFR--LEFVSNQEFTESEFMKWKEAMFSA 462
Query: 371 SGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEV 430
++P+ ++ +K+ SI++ + ++ ++++++EK+ P N A +K +L +E +
Sbjct: 463 GMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKAM 522
Query: 431 AQSRHDEVDMERIKKRLQELEASRDS----KVKDAKAIRLAEMNRKNRVENFKNASELKR 486
A+ D+ ++I+ +L ELE ++ + K+ AI + +N++NR N SE
Sbjct: 523 AEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAI--SYINQRNREWNIVE-SEKAL 579
Query: 487 VNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANGEEGATGEVG 546
V S DPF+RR KP T +N V + A G
Sbjct: 580 VAESHNMKNQQMDPFTRRQC--------KP----TIVSNSRDPAVQAAILAQLNAKYGSG 627
Query: 547 MAATEAALEAAAGAGKLVDTN--APLDLGTESNMLHDFELDISLNALKKFGGPQGVLAGF 604
+ +A E + G GK D N + DL + +HDF++ I L
Sbjct: 628 VLP-DAPKEMSKGQGKDKDLNSKSASDLSEDLFKVHDFDVKIDLQV-------------- 672
Query: 605 MARKQRIEATVGCQVPENDG--RRHALTLTVGDYKRRRGLL 643
+ + + A P DG RR +L + DYK+RRGL+
Sbjct: 673 PSSESKALAITSKAPPAKDGAPRR---SLNLEDYKKRRGLI 710
>gi|326920482|ref|XP_003206501.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog
[Meleagris gallopavo]
Length = 699
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 106/411 (25%), Positives = 186/411 (45%), Gaps = 47/411 (11%)
Query: 243 GMADSDDDGAPGSGRPTY--DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKN 300
GM + P +P +++ + + R KL +W PFF + + GCFVR+GIG +
Sbjct: 326 GMKTLLKEEIPPKSQPVSLPEELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNS 385
Query: 301 GPIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEF 360
P+YR+ + V E + Y+L T K L + G++ R + VS+ E EF
Sbjct: 386 KPVYRVAEITGV--VETAKVYQLGGTRTNKGLQLRHGSDQRVFR--LEFVSNQEFTESEF 441
Query: 361 KQWLREVERNSGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAE 420
+W + ++P+ ++ +K+ SI++ + ++ ++++++EK+ P N A +
Sbjct: 442 MKWKEAMFSAGMQLPTLDEINKKEVSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMK 501
Query: 421 KDRLRRELEVAQSRHDEVDMERIKKRLQELEASRDS----KVKDAKAIRLAEMNRKNRVE 476
K +L +E +A+ D+ ++I+ +L ELE ++ + K+ AI + +N++NR
Sbjct: 502 KTQLLKEKAMAEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAI--SYINQRNREW 559
Query: 477 NFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGAN 536
N SE V S DPF+RR KP T +N V
Sbjct: 560 NIVE-SEKALVAESHSMKNQQMDPFTRRQC--------KP----TIVSNSRDPAVQAAIL 606
Query: 537 GEEGATGEVGMAATEAALEAAAGAGKLVDTN--APLDLGTESNMLHDFELDISLNALKKF 594
+ A G+ +A + + G GK D N + DL + +HDF++ I L
Sbjct: 607 AQLNAKYGSGVLP-DAPKDMSKGQGKDKDVNSKSASDLSEDLFKVHDFDVKIDLQV---- 661
Query: 595 GGPQGVLAGFMARKQRIEATVGCQVPENDG--RRHALTLTVGDYKRRRGLL 643
+ + + A P DG RR +L + DYK+RRGL+
Sbjct: 662 ----------PSSESKALAITSKAPPAKDGAPRR---SLNLEDYKKRRGLI 699
>gi|355717490|gb|AES05953.1| Rtf1, Paf1/RNA polymerase II complex component,-like protein
[Mustela putorius furo]
Length = 420
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 178/390 (45%), Gaps = 45/390 (11%)
Query: 261 DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRS 320
+++ + + R KL +W PFF + + GCFVR+GIG + P+YR+ + V E +
Sbjct: 68 EELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAEITGV--VETAKV 125
Query: 321 YKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDV 380
Y+L T K L + GN+ R + VS+ E EF +W + ++P+ ++
Sbjct: 126 YQLGGTRTNKGLQLRHGNDQRVFR--LEFVSNQEFTESEFMKWKEAMFSAGMQLPTLDEI 183
Query: 381 LEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDM 440
+K+ SI++ + ++ ++++++EK+ P N A +K +L +E +A+ D+
Sbjct: 184 NKKELSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKAMAEDLGDQDKA 243
Query: 441 ERIKKRLQELEASRDS----KVKDAKAIRLAEMNRKNRVENFKNASELKRVNTSLKAGEA 496
++I+ +L ELE ++ + K+ AI + +N++NR N SE V S
Sbjct: 244 KQIQDQLNELEERAEALDRQRTKNISAI--SYINQRNREWNIVE-SEKALVAESHNMKNQ 300
Query: 497 GYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANGEEGATGEVGMAATEAALEA 556
DPF+RR + T +N V + A G+ +A E
Sbjct: 301 QMDPFTRRQCKP------------TIVSNSRDPAVQAAILAQLNAKYGSGVLP-DAPKEM 347
Query: 557 AAGAGKLVDTN--APLDLGTESNMLHDFELDISLNALKKFGGPQGVLAGFMARKQRIEAT 614
+ G GK D N + DL + +HDF++ I L + + + A
Sbjct: 348 SKGQGKDKDLNSKSASDLSEDLFKVHDFDVKIDLQV--------------PSSESKALAI 393
Query: 615 VGCQVPENDG--RRHALTLTVGDYKRRRGL 642
P DG RR +L + DYK+RRGL
Sbjct: 394 TSKAPPAKDGAPRR---SLNLEDYKKRRGL 420
>gi|348579425|ref|XP_003475480.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Cavia
porcellus]
Length = 831
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 180/391 (46%), Gaps = 45/391 (11%)
Query: 261 DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRS 320
+++ + + R KL +W PFF + + GCFVR+GIG + P+YR+ + V E +
Sbjct: 478 EELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAEITGV--VETAKV 535
Query: 321 YKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDV 380
Y+L T K L + G++ R + VS+ E EF +W + ++P+ ++
Sbjct: 536 YQLGGTRTNKGLQLRHGSDQRVFR--LEFVSNQEFTESEFMKWKEAMFSAGMQLPTLDEI 593
Query: 381 LEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDM 440
+K+ SI++ + ++ ++++++EK+ P N A +K +L +E +A+ D+
Sbjct: 594 NKKELSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKAMAEDLGDQDKA 653
Query: 441 ERIKKRLQELEASRDS----KVKDAKAIRLAEMNRKNRVENFKNASELKRVNTSLKAGEA 496
++I+ +L ELE ++ + K+ AI + +N++NR N SE V S
Sbjct: 654 KQIQDQLNELEERAEALDRQRTKNISAI--SYINQRNREWNIVE-SEKALVAESHNMRNQ 710
Query: 497 GYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANGEEGATGEVGMAATEAALEA 556
DPF+RR KP T +N V + A G+ +A E
Sbjct: 711 QMDPFTRRQC--------KP----TIVSNSRDPAVQAAILAQLNAKYGSGVLP-DAPKEM 757
Query: 557 AAGAGKLVDTN--APLDLGTESNMLHDFELDISLNALKKFGGPQGVLAGFMARKQRIEAT 614
+ G GK D N + DL + +HDF++ I L + + + A
Sbjct: 758 SKGQGKDKDLNSKSASDLSEDLFKVHDFDVKIDLQV--------------PSSESKALAI 803
Query: 615 VGCQVPENDG--RRHALTLTVGDYKRRRGLL 643
P DG RR +L + DYK+RRGL+
Sbjct: 804 TSKAPPAKDGAPRR---SLNLEDYKKRRGLI 831
>gi|417412100|gb|JAA52463.1| Putative paf1/rna polymer, partial [Desmodus rotundus]
Length = 644
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 105/401 (26%), Positives = 183/401 (45%), Gaps = 47/401 (11%)
Query: 253 PGSGRPTY--DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVR 310
P +P +++ + + R KL +W PFF + + GCFVR+GIG + P+YR+ +
Sbjct: 281 PPKSQPVSLPEELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAEIT 340
Query: 311 NVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERN 370
V E + Y+L T K L + G++ R + VS+ E EF +W +
Sbjct: 341 GV--VETAKVYQLGGTRTNKGLQLRHGSDQRVFR--LEFVSNQEFTESEFMKWKEAMFSA 396
Query: 371 SGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEV 430
++P+ ++ +K+ SI++ + ++ ++++++EK+ P N A +K +L +E +
Sbjct: 397 GMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKAM 456
Query: 431 AQSRHDEVDMERIKKRLQELEASRDS----KVKDAKAIRLAEMNRKNRVENFKNASELKR 486
A+ D+ ++I+ +L ELE ++ + K+ AI + +N++NR N SE
Sbjct: 457 AEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAI--SYINQRNREWNIVE-SEKAL 513
Query: 487 VNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANGEEGATGEVG 546
V S DPF+RR KP T +N V + A G
Sbjct: 514 VAESHNMKNQQMDPFTRRQC--------KP----TIVSNSRDPAVQAAILAQLNAKYGSG 561
Query: 547 MAATEAALEAAAGAGKLVDTN--APLDLGTESNMLHDFELDISLNALKKFGGPQGVLAGF 604
+ +A E + G GK D N + DL + +HDF++ I L
Sbjct: 562 VLP-DAPKEMSKGQGKDKDLNSKSASDLSEDLFKVHDFDVKIDLQV-------------- 606
Query: 605 MARKQRIEATVGCQVPENDG--RRHALTLTVGDYKRRRGLL 643
+ + + A P DG RR +L + DYK+RRGL+
Sbjct: 607 PSSESKALAITSKAPPAKDGAPRR---SLNLEDYKKRRGLI 644
>gi|327259531|ref|XP_003214590.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Anolis
carolinensis]
Length = 668
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 104/400 (26%), Positives = 181/400 (45%), Gaps = 45/400 (11%)
Query: 253 PGSGRPTY--DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVR 310
P +P +++ + + R KL +W PFF + + GCFVR+GIG + P+YR+ +
Sbjct: 305 PPKSQPVSLPEELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAEIT 364
Query: 311 NVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERN 370
V E + Y+L T K L + GN+ R + VS+ E EF +W +
Sbjct: 365 GV--VETAKVYQLGGARTNKGLQLRHGNDHRVFR--LEFVSNQEFTESEFMKWKEAMFSA 420
Query: 371 SGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEV 430
++P+ ++ +K+ SI++ + ++ ++++++EK+ P N A +K +L +E +
Sbjct: 421 GMQLPTLDEINKKEVSIKEAINYKFNDQDIEEIVKEKERFRKAPSNYAMKKTQLLKEKAM 480
Query: 431 AQSRHDEVDMERIKKRLQEL----EASRDSKVKDAKAIRLAEMNRKNRVENFKNASELKR 486
A+ D+ ++I+ +L EL EA + K+ AI + +N++NR N SE
Sbjct: 481 AEDMGDQDRAKQIQDQLNELDERAEALDRQRTKNISAI--SYINQRNREWNIVE-SEKAL 537
Query: 487 VNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANGEEGAT-GEV 545
V S DPF+RR KP T +N V + A G
Sbjct: 538 VAESRSMKNQQMDPFTRRQC--------KP----TIVSNSRDPAVQAAILAQLNAKYGSG 585
Query: 546 GMAATEAALEAAAGAGKLVDTNAPLDLGTESNMLHDFELDISLNALKKFGGPQGVLAGFM 605
+ + + G K V++ + DL + +HDF++ I L P
Sbjct: 586 VLPDAPKDMTKSQGKDKDVNSKSASDLSEDLFKVHDFDVKIDLQV------P-------- 631
Query: 606 ARKQRIEATVGCQVPENDG--RRHALTLTVGDYKRRRGLL 643
+ + + A P DG RR +L + DYK+RRGL+
Sbjct: 632 SSESKTLAITSKAPPAKDGAPRR---SLNLEDYKKRRGLI 668
>gi|148696021|gb|EDL27968.1| mCG9728 [Mus musculus]
Length = 633
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 103/401 (25%), Positives = 183/401 (45%), Gaps = 41/401 (10%)
Query: 253 PGSGRPTY--DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVR 310
P +P +++ + + R KL +W PFF + + GCFVR+GIG + P+YR+ +
Sbjct: 264 PPKSQPVSLPEELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAEIT 323
Query: 311 NVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERN 370
V E + Y+L T K L + GN+ R + VS+ E EF +W +
Sbjct: 324 GV--VETAKVYQLGGTRTNKGLQLRHGNDQRVFR--LEFVSNQEFTESEFMKWKEAMFSA 379
Query: 371 SGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEV 430
++P+ ++ +K+ SI++ + ++ ++++++EK+ P N A +K +L +E +
Sbjct: 380 GMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKAM 439
Query: 431 AQSRHDEVDMERIKKRLQELEASRDS----KVKDAKAIRLAEMNRKNRVENFKNASELKR 486
A+ D+ ++I+ +L ELE ++ + K+ AI + +N++NR N SE
Sbjct: 440 AEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAI--SYINQRNREWNIVE-SEKAL 496
Query: 487 VNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANGEEGATGEVG 546
V S DPF+RR + + +S + A + G+ A E+
Sbjct: 497 VAESHNMRNQQMDPFTRR--QCKPTIVSNSRDPAVQAAILAQLNAKYGSGVLPDAPKEMS 554
Query: 547 MAATEAALEAAAGAGKLVDTNAPL--DLGTESNMLHDFELDISLNALKKFGGPQGVLAGF 604
A+ G GK D N+ DL + +HDF++ I L
Sbjct: 555 KASI-----GPEGQGKDKDLNSKTASDLSEDLFKVHDFDVKIDLQV-------------- 595
Query: 605 MARKQRIEATVGCQVPENDG--RRHALTLTVGDYKRRRGLL 643
+ + + A P DG RR +L + DYK+RRGL+
Sbjct: 596 PSSESKALAITSKAPPAKDGAPRR---SLNLEDYKKRRGLI 633
>gi|426233018|ref|XP_004010514.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Ovis
aries]
Length = 585
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 105/401 (26%), Positives = 183/401 (45%), Gaps = 47/401 (11%)
Query: 253 PGSGRPTY--DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVR 310
P +P +++ + + R KL +W PFF + + GCFVR+GIG + P+YR+ +
Sbjct: 222 PPKSQPVSLPEELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAEIT 281
Query: 311 NVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERN 370
V E + Y+L T K L + G++ R + VS+ E EF +W +
Sbjct: 282 GV--VETAKVYQLGGTRTNKGLQLRHGSDQRVFR--LEFVSNQEFTESEFMKWKEAMFSA 337
Query: 371 SGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEV 430
++P+ ++ +K+ SI++ + ++ ++++++EK+ P N A +K +L +E +
Sbjct: 338 GMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKAM 397
Query: 431 AQSRHDEVDMERIKKRLQELEASRDS----KVKDAKAIRLAEMNRKNRVENFKNASELKR 486
A+ D+ ++I+ +L ELE ++ + K+ AI + +N++NR N SE
Sbjct: 398 AEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAI--SYINQRNREWNIVE-SEKAL 454
Query: 487 VNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANGEEGATGEVG 546
V S DPF+RR KP T +N V + A G
Sbjct: 455 VAESHNMKNQQMDPFTRRQC--------KP----TIVSNSRDPAVQAAILAQLNAKYGSG 502
Query: 547 MAATEAALEAAAGAGKLVDTN--APLDLGTESNMLHDFELDISLNALKKFGGPQGVLAGF 604
+ +A E + G GK D N + DL + +HDF++ I L
Sbjct: 503 VLP-DAPKEMSKGQGKDKDLNSKSASDLSEDLFKVHDFDVKIDLQV-------------- 547
Query: 605 MARKQRIEATVGCQVPENDG--RRHALTLTVGDYKRRRGLL 643
+ + + A P DG RR +L + DYK+RRGL+
Sbjct: 548 PSSESKALAITSKAPPAKDGAPRR---SLNLEDYKKRRGLI 585
>gi|449502335|ref|XP_002199007.2| PREDICTED: RNA polymerase-associated protein RTF1 homolog
[Taeniopygia guttata]
Length = 585
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 105/401 (26%), Positives = 183/401 (45%), Gaps = 47/401 (11%)
Query: 253 PGSGRPTY--DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVR 310
P +P +++ + + R KL +W PFF + + GCFVR+GIG + P+YR+ +
Sbjct: 222 PPKSQPVSLPEELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAEIT 281
Query: 311 NVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERN 370
V E + Y+L T K L + G++S R + VS+ E EF +W +
Sbjct: 282 GV--VETAKVYQLGGTRTNKGLQLRHGSDSRVFR--LEFVSNQEFTESEFMKWKEAMFSA 337
Query: 371 SGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEV 430
++P+ ++ +K+ SI++ + ++ ++++++EK+ P N A +K +L +E +
Sbjct: 338 GMQLPTLDEINKKEVSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKAM 397
Query: 431 AQSRHDEVDMERIKKRLQELEASRDS----KVKDAKAIRLAEMNRKNRVENFKNASELKR 486
A+ D+ ++I+ +L ELE ++ + K+ AI + +N++NR N SE
Sbjct: 398 AEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAI--SYINQRNREWNIVE-SEKAL 454
Query: 487 VNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANGEEGATGEVG 546
V S DPF+RR KP T +N V + A G
Sbjct: 455 VAESHSMKNQQMDPFTRRQC--------KP----TIVSNSRDPAVQAAILAQLNAKYGSG 502
Query: 547 MAATEAALEAAAGAGKLVDTN--APLDLGTESNMLHDFELDISLNALKKFGGPQGVLAGF 604
+ +A + G GK D N + DL + +HDF++ I L
Sbjct: 503 VLP-DAPKDINKGQGKDKDVNSKSASDLSEDLFKVHDFDVKIDLQV-------------- 547
Query: 605 MARKQRIEATVGCQVPENDG--RRHALTLTVGDYKRRRGLL 643
+ + + A P DG RR +L + DYK+RRGL+
Sbjct: 548 PSSESKALAITSKAPPAKDGAPRR---SLNLEDYKKRRGLI 585
>gi|449274649|gb|EMC83727.1| RNA polymerase-associated protein RTF1 like protein [Columba livia]
Length = 650
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 102/399 (25%), Positives = 181/399 (45%), Gaps = 44/399 (11%)
Query: 253 PGSGRPTY--DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVR 310
P +P +++ + + R KL +W PFF + + GCFVR+GIG + P+YR+ +
Sbjct: 288 PPKSQPVSLPEELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAEIT 347
Query: 311 NVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERN 370
V E + Y+L T K L + G++S R + VS+ E EF +W +
Sbjct: 348 GV--VETAKVYQLGGTRTNKGLQLRHGSDSRVFR--LEFVSNQEFTESEFMKWKEAMFSA 403
Query: 371 SGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEV 430
++P+ ++ +K+ SI++ + ++ ++++++EK+ P N A +K +L +E +
Sbjct: 404 GMQLPTLDEINKKEVSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKAM 463
Query: 431 AQSRHDEVDMERIKKRLQELEASRDS----KVKDAKAIRLAEMNRKNRVENFKNASELKR 486
A+ D+ ++I+ +L ELE ++ + K+ AI + +N++NR N SE
Sbjct: 464 AEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAI--SYINQRNREWNIVE-SEKAL 520
Query: 487 VNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANGEEGATGEVG 546
V S DPF+RR KP T +N V + A G
Sbjct: 521 VAESHSMKNQQMDPFTRRQC--------KP----TIVSNSRDPAVQAAILAQLNAKYGSG 568
Query: 547 MAATEAALEAAAGAGKLVDTNAPLDLGTESNMLHDFELDISLNALKKFGGPQGVLAGFMA 606
+ + A K V++ + DL + +HDF++ I L +
Sbjct: 569 VLPDAPKDMSKARKDKDVNSKSASDLSEDLFKVHDFDVKIDLQV--------------PS 614
Query: 607 RKQRIEATVGCQVPENDG--RRHALTLTVGDYKRRRGLL 643
+ + A P DG RR +L + DYK+RRGL+
Sbjct: 615 SESKALAITSKAPPAKDGAPRR---SLNLEDYKKRRGLI 650
>gi|387018404|gb|AFJ51320.1| RNA polymerase-associated protein RTF1-like protein [Crotalus
adamanteus]
Length = 671
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 102/400 (25%), Positives = 182/400 (45%), Gaps = 45/400 (11%)
Query: 253 PGSGRPTY--DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVR 310
P +P +++ + + R KL +W PFF + + GCFVR+GIG + P+YR+ +
Sbjct: 308 PPKSQPVSLPEELNRVRLSRHKLERWCHMPFFAKTVAGCFVRIGIGNHNSKPVYRVAEIT 367
Query: 311 NVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERN 370
V E + Y+L T K L + GN+ R + VS+ E EF +W +
Sbjct: 368 GV--VETAKVYQLGATRTNKGLQLRHGNDQRVFR--LEFVSNQEFTESEFMKWKEAMFSA 423
Query: 371 SGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEV 430
++P+ ++ +K+ SI++ + ++ ++++++EK+ P N A +K +L +E +
Sbjct: 424 GMQLPTLDEINKKEVSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKAM 483
Query: 431 AQSRHDEVDMERIKKRLQELEASRDS----KVKDAKAIRLAEMNRKNRVENFKNASELKR 486
A+ D+ ++I+ +L ELE ++ + K+ AI + +N++NR N SE
Sbjct: 484 AEDLGDQDRAKQIQDQLNELEERAEALDRQRTKNISAI--SYINQRNREWNIVE-SEKAL 540
Query: 487 VNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANGEEGAT-GEV 545
V S DPF+RR KP T +N V + A G
Sbjct: 541 VAESHSMKNQQMDPFTRRQC--------KP----TIVSNSRDPAVQAAILAQLNAKYGSG 588
Query: 546 GMAATEAALEAAAGAGKLVDTNAPLDLGTESNMLHDFELDISLNALKKFGGPQGVLAGFM 605
+ + + G K +++ + DL + +HDF++ I L P
Sbjct: 589 VLPDAPKDMTKSQGKDKDMNSKSASDLSEDLFKVHDFDVKIDLQV------P-------- 634
Query: 606 ARKQRIEATVGCQVPENDG--RRHALTLTVGDYKRRRGLL 643
+ + + A P DG RR +L + DYK+RRGL+
Sbjct: 635 SSESKTLAITSKAPPAKDGAPRR---SLNLEDYKKRRGLI 671
>gi|348515979|ref|XP_003445517.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog
[Oreochromis niloticus]
Length = 677
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 178/403 (44%), Gaps = 46/403 (11%)
Query: 252 APGSGRPTY--DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMV 309
P +P D++ I + R KL +W PFF + + GCFVR+GIG S + P+YR+ +
Sbjct: 310 TPPKSQPVSLPDELNRIRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNSSSKPVYRVAEI 369
Query: 310 RNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVER 369
VD E + Y+L + T K L + G ++ R + VS+ E EF +W +
Sbjct: 370 --VDVVETAKVYQLGSTRTNKGLQLRHGGDTRVFR--LEFVSNQEFTESEFMKWKEAMIA 425
Query: 370 NSGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELE 429
++P+ ++ +K++SI++ + ++ ++ +++EK P N A +K +L ++
Sbjct: 426 AGMQVPTLDEITKKEQSIKEALNYKFNDKDIEDIVKEKDRFRKAPPNYAMKKTQLLKDKA 485
Query: 430 VAQSRHDEVDMERIKKRLQELEASRDS----KVKDAKAIRLAEMNRKNRVENFKNASELK 485
+A+ D ++ I+ L ELE ++ + K+ AI + +N++NR N SE
Sbjct: 486 MAEESGDGERVKVIQDELNELEERAEALDRQRTKNISAI--SYINQRNRSWNIVE-SEKA 542
Query: 486 RVNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANGEEGATGEV 545
V A DPF+RR KP A + N + G+
Sbjct: 543 LVAEGQNAKNQQMDPFTRRQC--------KPTMVSNARDPSVHAAILAHLNQKYGSGSTP 594
Query: 546 GMAATEAALEAAAGAGKLVDTNAP---LDLGTESNMLHDFELDISLNALKKFGGPQGVLA 602
++ E + G D + P DL + +HDF++ I L P
Sbjct: 595 DNSSPE---KNKLGQTNQKDKDVPKPTTDLSEDLFKVHDFDVKIDLQV------PNAEAK 645
Query: 603 GFMARKQRIEATVGCQVPENDG--RRHALTLTVGDYKRRRGLL 643
+ +P DG RR +L + DYK+RRGL+
Sbjct: 646 SL--------SVSSNALPVKDGAPRR---SLNLEDYKKRRGLI 677
>gi|330819095|ref|XP_003291600.1| hypothetical protein DICPUDRAFT_156220 [Dictyostelium purpureum]
gi|325078202|gb|EGC31866.1| hypothetical protein DICPUDRAFT_156220 [Dictyostelium purpureum]
Length = 621
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 133/246 (54%), Gaps = 15/246 (6%)
Query: 268 IRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRSYKLENRT 327
+ R+ L KW +P+FE L G FVRV IG N PIYR+ + V+ + YK+EN+
Sbjct: 268 LSRNMLVKWVDQPYFETLAPGFFVRVVIGSHLNSPIYRIAEI--VEVRRGHKLYKVENKE 325
Query: 328 TCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKESI 387
T K L +++ S + + VS++ + E ++W+ ++ R+ ++P+ + + +K I
Sbjct: 326 TDKLLLLSYA--GSCKEFGIENVSNNVITQAEHEKWISDMIRSEKKLPTPESIEKKIGDI 383
Query: 388 QKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDR---LRRELEVAQSRHDEVDMERIK 444
+K ++Y+ +++ QE+ P N+A EK + LR L+V + + + +ERI+
Sbjct: 384 KKAQEYIYTNEDIEKRAQERMKYQKTPHNIAFEKAKLIALRETLDVDSTEY-KTTVERIE 442
Query: 445 KRLQEL--EASRDSKVKDAKAIRLAEMNRKNRVENFKNASELKRVNTSLKAGEAGYDPFS 502
+ L +L E +S + K + L +N+KN+ NF+ + + + E +DPF+
Sbjct: 443 E-LNKLATEQKEESMTETEKLVSL--INKKNKSLNFQYSQSAGTSTQEIVSNE--FDPFA 497
Query: 503 RRWTRS 508
RR TRS
Sbjct: 498 RRKTRS 503
>gi|432936476|ref|XP_004082134.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Oryzias
latipes]
Length = 673
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 179/403 (44%), Gaps = 46/403 (11%)
Query: 252 APGSGRPTY--DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMV 309
P +P +++ I + R KL +W PFF + + GCFVR+GIG S + P+YR+ +
Sbjct: 306 TPPKSQPVSLPEELNRIRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNSSSKPVYRVAEI 365
Query: 310 RNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVER 369
VD E + Y+L + T K L + G ++ R + VS+ E EF +W +
Sbjct: 366 --VDVVETAKVYQLGSTRTNKGLQLRHGADTRVFR--LEFVSNQEFTESEFMKWKEAMII 421
Query: 370 NSGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELE 429
++P+ ++ +K++SI++ + ++ ++ +++EK P N A +K +L ++
Sbjct: 422 AGMQVPTLDEITKKEQSIKEAVNYKFNDKDIEDIVKEKDRFRRAPPNYAMKKTQLLKDKA 481
Query: 430 VAQSRHDEVDMERIKKRLQELEASRDS----KVKDAKAIRLAEMNRKNRVENFKNASELK 485
+A+ D ++ I+ L ELE ++ + K+ AI + +N++NR N SE
Sbjct: 482 MAEENGDGEKVKVIQDELNELEERAEALDRQRTKNISAI--SYINQRNRSWNIVE-SEKA 538
Query: 486 RVNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANGEEGATGEV 545
V A DPF+RR KP A + N + G+
Sbjct: 539 LVAEGQNAKNQQMDPFTRRQC--------KPTMVSNARDPSVHAAILAHLNQKYGSGSGP 590
Query: 546 GMAATEAALEAAAGAGKLVDTNAP---LDLGTESNMLHDFELDISLNALKKFGGPQGVLA 602
++TE + A D + P DL + +HDF++ I L V +
Sbjct: 591 DPSSTEKNTQDQASPK---DKDVPKPTTDLSEDLFKVHDFDVKIDLQVPNAEAKSLSVSS 647
Query: 603 GFMARKQRIEATVGCQVPENDG--RRHALTLTVGDYKRRRGLL 643
+ P DG RR +L + DYK+RRGL+
Sbjct: 648 NAL--------------PVKDGAPRR---SLNLEDYKKRRGLI 673
>gi|145356861|ref|XP_001422642.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582885|gb|ABP00959.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 576
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 140/274 (51%), Gaps = 28/274 (10%)
Query: 259 TYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGP-IYRLCMVRNV-DATE 316
T D+I +T++R +L +W EP+FE + C RVGIG +K G +YRL + V D
Sbjct: 177 TRDEIASVTVKRHQLEQWVNEPYFEAAVTNCLTRVGIGLNKEGQNVYRLVEIAGVADGKY 236
Query: 317 PDRSYK----LENR-TTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNS 371
S K L N+ T K+L + WG S ++++ VS+S + E+K W+ +
Sbjct: 237 KQYSLKKYEYLANKPPTQKWLILRWGK--SEKTFRLSEVSNSDVQDAEWKAWVAHCAQAG 294
Query: 372 GRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVA 431
+ +DV + + +++ + Y++ V ++L EK+ N+ EK++++ + A
Sbjct: 295 CTPITARDVKKCLQGLEEAKNYRYTSDDVTKILAEKREKQGTRHNLLFEKEQIKAAIAHA 354
Query: 432 QSRHDEVDMERIKKRLQELEASRDSKVKDAKAIR-------LAEMNRKNRVENFKNASEL 484
++ +D +E +++R E+ D ++KD R LA +NR+N ++N + S
Sbjct: 355 EAENDLDKVEELRQRFDEV----DREIKDKLQQRSGSTQDALANINRRNEIQNSEKLS-- 408
Query: 485 KRVNTSLKAGEAGY------DPFSRRWTRSRNYY 512
KR + + +AG DPFSRR TR Y+
Sbjct: 409 KRASEQVAKLKAGVLNTGSGDPFSRRPTRLTTYW 442
>gi|427788275|gb|JAA59589.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 699
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 128/255 (50%), Gaps = 21/255 (8%)
Query: 259 TYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPD 318
T +++ +I + R KL +W PFF + ++GCFVR+GIG + +YR+ + D E
Sbjct: 352 TKEEVGKIRLSRHKLERWVHAPFFAKTVIGCFVRIGIGSNNGRAVYRVAQI--TDVVETA 409
Query: 319 RSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQ 378
+ Y L T K L + G + R + VS+ E EF +W + P+ +
Sbjct: 410 KVYALGRCRTNKGLRLKHGKQERVFR--LEFVSNQDFTESEFLKWKEVMALEGASFPTTE 467
Query: 379 DVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSR--HD 436
+V K + IQ + Y + V+ ++ EK+ P N A K +L ++ E+A+ + H+
Sbjct: 468 EVTRKVKDIQDALNYQYKESDVETIVSEKQRFKRNPHNYAMRKTQLMKQKEMAEQKGDHE 527
Query: 437 EV-----DMERIKKRLQELEASRDSKVKDAKAIRLAEMNRKNRVENFKNASELKR--VNT 489
E ++E++++R +EL+ R S + ++ +N +NR+ KN E++R +
Sbjct: 528 EALRLSGELEQLEERARELDKQRTSTISA-----ISYINERNRL---KNIVEIERAILEE 579
Query: 490 SLKAGEAGYDPFSRR 504
+ E DPF+RR
Sbjct: 580 AKLNKEKADDPFTRR 594
>gi|17560116|ref|NP_505473.1| Protein F25B3.6 [Caenorhabditis elegans]
gi|3876239|emb|CAA94759.1| Protein F25B3.6 [Caenorhabditis elegans]
Length = 613
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 161/337 (47%), Gaps = 34/337 (10%)
Query: 268 IRRSKLAKWFMEPFFEELIVGCFVRVGIGR-SKNGPIYRLCMVRNVDATEPDRSYKLENR 326
+ R KL+ PFF+ +VGC+VR+G G+ S +G YR+ + V+ E ++ Y+LE +
Sbjct: 263 LSRHKLSLMIHAPFFDSTVVGCYVRLGQGQMSGSGSKYRIWKIVGVE--ESNKVYELEGK 320
Query: 327 TTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKES 386
T K + N S ++M VS++ + EF +WL +R+ G +P+ + +KK+
Sbjct: 321 KTNKIIKCQ--NGGSERPFRMQFVSNADFEQIEFDEWLLACKRH-GNLPTVDIMDKKKQD 377
Query: 387 IQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKR 446
I+K YS V M++EK + P N A K ++ E+AQ R D + E+I+ +
Sbjct: 378 IEKAINHKYSDKEVDLMIKEKSKYQTVPRNFAMTKANWSKQKELAQQRGDIREAEQIQTK 437
Query: 447 LQELEASRDSKVKD-AKAIR-LAEMNRKNRVENFKNASELK--RVNTSLKAGEAGYD-PF 501
+ E+E D K+ +K+I +A +N +NR S++K ++ LK E D PF
Sbjct: 438 IDEIERQADELEKERSKSISAIAFINHRNR-------SKIKDQVLSGQLKIEENSQDDPF 490
Query: 502 SRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANGEEGATGEVGMAATEAALEAAAGAG 561
+R+ R SK + T A+ + G + + + ++
Sbjct: 491 TRKKGGMRVVSGSKSRLDGTLSASSSTTNLSDGGKDKSSSLAKPTQPPPSTQIKKK---- 546
Query: 562 KLVDTNAPLDLGTESNMLHDFELDISLNALKKFGGPQ 598
T+ + LHDF+LDI L LK F P+
Sbjct: 547 ------------TDISSLHDFDLDIDLGKLKDFSTPE 571
>gi|427779851|gb|JAA55377.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 684
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 128/255 (50%), Gaps = 21/255 (8%)
Query: 259 TYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPD 318
T +++ +I + R KL +W PFF + ++GCFVR+GIG + +YR+ + D E
Sbjct: 337 TKEEVGKIRLSRHKLERWVHAPFFAKTVIGCFVRIGIGSNNGRAVYRVAQI--TDVVETA 394
Query: 319 RSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQ 378
+ Y L T K L + G + R + VS+ E EF +W + P+ +
Sbjct: 395 KVYALGRCRTNKGLRLKHGKQERVFR--LEFVSNQDFTESEFLKWKEVMALEGASFPTTE 452
Query: 379 DVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSR--HD 436
+V K + IQ + Y + V+ ++ EK+ P N A K +L ++ E+A+ + H+
Sbjct: 453 EVTRKVKDIQDALNYQYKESDVETIVSEKQRFKRNPHNYAMRKTQLMKQKEMAEQKGDHE 512
Query: 437 EV-----DMERIKKRLQELEASRDSKVKDAKAIRLAEMNRKNRVENFKNASELKR--VNT 489
E ++E++++R +EL+ R S + ++ +N +NR+ KN E++R +
Sbjct: 513 EALRLSGELEQLEERARELDKQRTSTISA-----ISYINERNRL---KNIVEIERAILEE 564
Query: 490 SLKAGEAGYDPFSRR 504
+ E DPF+RR
Sbjct: 565 AKLNKEKADDPFTRR 579
>gi|198432578|ref|XP_002121462.1| PREDICTED: similar to mCG9728 [Ciona intestinalis]
Length = 648
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 126/268 (47%), Gaps = 12/268 (4%)
Query: 243 GMADSDDDGAPGSGR----PTYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRS 298
G +D +DD + S R +D+ I + R K+ KW PFF E +GCFVR+GIG
Sbjct: 279 GGSDEEDDRSSNSKRFQPISAKEDLSIIRLSRFKMEKWVHLPFFRETCIGCFVRIGIGNH 338
Query: 299 KNGPIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEE 358
P+YR+ + +D E + Y+L T K L + G + R + VS+S +
Sbjct: 339 NGRPVYRIAEI--LDVVETAKVYQLGKTRTNKGLRLRHGQQERVFR--LEFVSNSEFTDS 394
Query: 359 EFKQWLREVERNSGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVA 418
EF +W V +P+ ++ +K+ ++QK + + +++EK P N A
Sbjct: 395 EFFKWKEAVMLAGLELPTLDEIHKKQSAMQKAIQYNIKDKDIDHIIKEKTKFRKNPFNYA 454
Query: 419 AEKDRLRRELEVAQSRHDEVDMERIKKRLQELE--ASRDSKVKDAKAIRLAEMNRKNRVE 476
+K L ++ E+A+ + D + +RI +L ELE A+ K + + +N + +
Sbjct: 455 MKKTTLLKQKEMAEVQGDGDETKRINSQLDELEERATHLDKQRQENIAGITYINERIKSH 514
Query: 477 NFKNASELKRVNTSLKAGEAGYDPFSRR 504
N K L+ A DPF+RR
Sbjct: 515 NLLKEEACKEEWKVLRKTVA--DPFTRR 540
>gi|448079391|ref|XP_004194377.1| Piso0_004866 [Millerozyma farinosa CBS 7064]
gi|359375799|emb|CCE86381.1| Piso0_004866 [Millerozyma farinosa CBS 7064]
Length = 576
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 110/441 (24%), Positives = 202/441 (45%), Gaps = 50/441 (11%)
Query: 93 EGDSSNESDDDNHGQMTELEREMMIFERDDKKVDKNLRDKFRSRREERSTRSTKETPPLP 152
EG +E D + M E++RE +FER +++++ K+ +R ++ + ++
Sbjct: 106 EGKYKDEEDREKLLSMDEIQREQTLFERT-QEMERYNEKKYLQQRMQQEKQKKHDSSEKK 164
Query: 153 SSRSARLAARSADRAAAKDDALNELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSPVKRK 212
++R++ ++ R + K D L EL+ +R E R++ R
Sbjct: 165 ATRASTRNKEASGRKS-KLDKLTELKKQR------ERKSRMQQDDYEEESEEEDEDEHR- 216
Query: 213 AFTPAGLSSSSQSESESRSHSDDEGSTGDGGMADSDDDGAPGSG-----------RPTYD 261
S DDE G G D D+D A G G R +
Sbjct: 217 -----------------FSGDDDEDGYG-YGYDDEDEDVAWGRGGSSKFKRKSFERAKLE 258
Query: 262 DIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIG--RSKNGPIYRLCMVRNVDATEPDR 319
DI++I + RS L K+ F + ++GCF RV IG R P+YRL + +V + P++
Sbjct: 259 DIQKILVGRSILHKYCYYSDFSDAVIGCFGRVNIGIDRRTKRPMYRLVTITDVKSI-PEK 317
Query: 320 SYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQD 379
+Y L YL V E S + + + SDSP EE ++++ E+ + +P D
Sbjct: 318 AYDLPKFKCDIYLTVNQNREQSKT-FPINIFSDSPLTSEELERYVHELNKTGEELPYLDD 376
Query: 380 VLEKKESIQKINTFVYSAATVKQMLQEKKSASS--RPLNVAAEKDRLRRELEVAQSRHDE 437
V EK E +Q + S + +++++K+ SS + + +K RL +L++A+ +DE
Sbjct: 377 VNEKYEILQHMLNRGISDKDINEIMEKKQKLSSNIQSYDAVYKKARLLDQLKIAEQTNDE 436
Query: 438 VDMERIKKRLQELE---ASRDSKVKDAKAI-RLAEMNRKNRVENFKNA--SELKRVNTSL 491
+ K++ ELE S++ +++++ ++++N +NR N ++ +E+K
Sbjct: 437 QKATEVAKKISELEKVLISKNMSGNNSESLSTMSKVNERNRKLNHESIRKAEVKSSQARK 496
Query: 492 KAGEAGYDPFSRRWTRSRNYY 512
G DPFSR T ++ Y
Sbjct: 497 VLESGGGDPFSRLKTSAKTMY 517
>gi|190344599|gb|EDK36304.2| hypothetical protein PGUG_00402 [Meyerozyma guilliermondii ATCC
6260]
Length = 539
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 114/445 (25%), Positives = 203/445 (45%), Gaps = 62/445 (13%)
Query: 93 EGDSSNESDDDNHGQMTELEREMMIFERDDKKVDKNLRDKFRSRREERSTRSTKETPPLP 152
EG +E D +N M E++RE ++FER + N + + R ++++ +++P
Sbjct: 71 EGKYRDEEDRENLLNMDEMKREEILFERSQEMESYNEKIYLQQRLKQQAA---QDSPR-- 125
Query: 153 SSRSARLAARSADRAAAKDDALNELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSPVKRK 212
++RS++ SA + +K D L+ELR +R ++Q RR+
Sbjct: 126 ATRSSKRNKTSA-KTTSKSDKLSELRKQREQKQ-----RRMDGDFDDDEEEEDEDDNLDD 179
Query: 213 AFTPAGLSSSSQSESESRSHSDDEGSTGDGGMADSDDDGAPGSGRPTY----------DD 262
G G D +++ GSGR + DD
Sbjct: 180 EIADLG---------------------GYEDDYDDEEEVKWGSGRSKFAPRSYVRASLDD 218
Query: 263 IKEITIRRSKLAKWFMEPFFEELIVGCF--VRVGIGRSKNGPIYRLCMVRNVDATEPDRS 320
I +I + RS L K+ F E I+ CF V VG+ R+ P+YR+ + +V + P +
Sbjct: 219 INKIVVGRSMLTKYCYYNGFNETILDCFTKVNVGVDRATRQPLYRMVRIDDVKSI-PQKP 277
Query: 321 YKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDV 380
Y + YL VT N++ + + + SDSP +E ++ E+E+ +P DV
Sbjct: 278 YSVAGSKIDLYLTVTQ-NKNQTKEFPLTVFSDSPISTQELDRYKIELEKTGEELPYVDDV 336
Query: 381 LEKKESIQKINTFVYSAATVKQMLQEKKSASSRP--LNVAAEKDRLRRELEVAQSRHDEV 438
EK ES+Q + T S V +M++ K+ + N EK +L L++A+ +
Sbjct: 337 NEKHESLQHLTTRGLSDKDVNEMIERKQKLQANVGGYNAVFEKSKLLDLLKIAKQEGNTS 396
Query: 439 DMERIKKRLQELE---ASRDSKVKDAKAIR-LAEMNRKNRVENFKN-------ASELKRV 487
E ++ +L LE AS+ + ++++ ++++N +NR N KN +S+L++V
Sbjct: 397 KAESLQAKLTALENTLASQTNTSNTSESLNTMSKVNERNRRLNQKNIRKAEIKSSQLRKV 456
Query: 488 NTSLKAGEAGYDPFSRRWTRSRNYY 512
++ G DPFSR T +R +Y
Sbjct: 457 ---VENNPDGGDPFSRFKTATRVFY 478
>gi|52346042|ref|NP_001005068.1| Rtf1, Paf1/RNA polymerase II complex component, homolog [Xenopus
(Silurana) tropicalis]
gi|49899962|gb|AAH76973.1| MGC89486 protein [Xenopus (Silurana) tropicalis]
Length = 590
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 100/390 (25%), Positives = 177/390 (45%), Gaps = 43/390 (11%)
Query: 261 DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRS 320
+++ ++ + R KL +W PFF + + GCFVR+GIG + P+YR+ + V E +
Sbjct: 237 EELNKVRLSRHKLERWCHMPFFAKTVSGCFVRIGIGNHNSKPVYRVAEITGV--VETGKV 294
Query: 321 YKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDV 380
Y+L T K L + GN+ R + VS+ E EF +W + ++P+ ++
Sbjct: 295 YQLGGTRTNKGLQLRHGNDQRVFR--LEFVSNQEFTESEFMKWKEAMFSAGMQLPTLDEI 352
Query: 381 LEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDM 440
+K+ SI++ + ++ ++++++EK+ P N A +K +L ++ +A+ D+
Sbjct: 353 NKKELSIKEAMNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLMKDKAMAEEAGDQDRA 412
Query: 441 ERIKKRLQELEASRDS----KVKDAKAIRLAEMNRKNRVENFKNASELKRVNTSLKAGEA 496
++I+ L ELE ++ + K+ AI + +N++NR N SE V S +
Sbjct: 413 KQIQDELNELEERAEALDRQRTKNISAI--SYINQRNREWNIVE-SEKALVAESQSMKQQ 469
Query: 497 GYDPFSRRWTRSRNYYISK-PGEEVTAEANGDKNGVPGGANGEEGATGEVGMAATEAALE 555
DPF+RR + S+ P + A + G +N TG
Sbjct: 470 QMDPFTRRQCKPTMVSNSRDPAVQAAIIAQLNAKYGSGASNDASKDTG------------ 517
Query: 556 AAAGAGKLVDTNAPLDLGTESNMLHDFELDISLNALKKFGGPQGVLAGFMARKQRIEATV 615
+A K +T + DL + +HDF++ I L P A
Sbjct: 518 SAQSKDKDGNTKSASDLSEDLFKVHDFDVKIDLQV------PSSESKSL--------AIS 563
Query: 616 GCQVPENDG--RRHALTLTVGDYKRRRGLL 643
P DG RR +L + DYK+RRGL+
Sbjct: 564 SKAPPAKDGAPRR---SLNLEDYKKRRGLI 590
>gi|341879909|gb|EGT35844.1| hypothetical protein CAEBREN_08873 [Caenorhabditis brenneri]
Length = 610
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 98/345 (28%), Positives = 166/345 (48%), Gaps = 34/345 (9%)
Query: 259 TYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGR-SKNGPIYRLCMVRNVDATEP 317
T +++ + R KL+ PFF+ +VGC+VR+G G+ S + YR+ + V+ T
Sbjct: 255 TLAELRRARLSRHKLSLMIHAPFFDSTVVGCYVRLGQGQMSGSESKYRIWKIVGVEQT-- 312
Query: 318 DRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSK 377
++ Y LE + T K + +G S ++M VS+S + EF +WL + + G +P+
Sbjct: 313 NKVYDLEGKKTNKSIKCQFGR--SERPFRMQFVSNSEFEQVEFDEWLNATKAH-GNVPTV 369
Query: 378 QDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDE 437
+ +KK I+K YS V M+ EK N A K L ++ E+AQ R D
Sbjct: 370 DIMDKKKMDIEKAVNHKYSDKEVDAMIVEKSKFQKVTRNFAMTKAGLAKQKELAQQRGDI 429
Query: 438 VDMERIKKRLQELEASRDSKVKD-AKAIR-LAEMNRKNRVENFKNASELKRVNTSLKAGE 495
+ ER++K + E+E D K+ +K+IR +A +N +NR + K+ + ++ LK E
Sbjct: 430 REAERVQKEIDEIERHADELDKERSKSIRGIAFINHRNRTQ-IKD----QVLSGKLKIEE 484
Query: 496 AGY-DPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANGEEGATGEVGMAATEAAL 554
DPF+R+ K G + + G K+ + G + + EA
Sbjct: 485 NSQDDPFTRK----------KGGMRIVS---GSKSKLDGTLSASSSMSN-----LAEADK 526
Query: 555 EAAAGAGKLVDTNAPLDLGTESNM--LHDFELDISLNALKKFGGP 597
+ L ++ ++ ++NM LHDF+LDI + LK F P
Sbjct: 527 TPSMAKATLPPPSSLKEIKKKTNMSSLHDFDLDIDFDKLKDFTTP 571
>gi|313104179|sp|Q5RAD5.2|RTF1_PONAB RecName: Full=RNA polymerase-associated protein RTF1 homolog
Length = 665
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 162/344 (47%), Gaps = 28/344 (8%)
Query: 253 PGSGRPTY--DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVR 310
P +P +++ + + R KL +W PFF + + GCFVR+GIG + P+YR+ +
Sbjct: 342 PPKSQPVSLPEELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAEIT 401
Query: 311 NVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERN 370
V E + Y+L T K L + GN+ R + VS+ E EF +W +
Sbjct: 402 GV--VETAKVYQLGGTRTNKGLQLRHGNDQRVFR--LEFVSNQEFTESEFMKWKEAMFSA 457
Query: 371 SGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEV 430
++P+ ++ +K+ SI++ + ++ ++++++EK+ P N A +K +L +E +
Sbjct: 458 GMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKAM 517
Query: 431 AQSRHDEVDMERIKKRLQELEASRDS----KVKDAKAIRLAEMNRKNRVENFKNASELKR 486
A+ D+ ++I+ +L ELE ++ + K+ AI + +N++NR N SE
Sbjct: 518 AEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAI--SYINQRNREWNIVE-SEKAL 574
Query: 487 VNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANGEEGATGEVG 546
V S DPF+RR KP T +N V + A G
Sbjct: 575 VAESHNMKNQQMDPFTRRQC--------KP----TIVSNSRDPAVQAAILAQLNAKYGSG 622
Query: 547 MAATEAALEAAAGAGKLVDTN--APLDLGTESNMLHDFELDISL 588
+ +A E + G GK D N + DL + +HDF++ I L
Sbjct: 623 VLP-DAPKEMSKGQGKDKDLNSKSASDLSEDLFKVHDFDVKIDL 665
>gi|55729077|emb|CAH91275.1| hypothetical protein [Pongo abelii]
Length = 630
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 162/344 (47%), Gaps = 28/344 (8%)
Query: 253 PGSGRPTY--DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVR 310
P +P +++ + + R KL +W PFF + + GCFVR+GIG + P+YR+ +
Sbjct: 307 PPKSQPVSLPEELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAEIT 366
Query: 311 NVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERN 370
V E + Y+L T K L + GN+ R + VS+ E EF +W +
Sbjct: 367 GV--VETAKVYQLGGTRTNKGLQLRHGNDQRVFR--LEFVSNQEFTESEFMKWKEAMFSA 422
Query: 371 SGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEV 430
++P+ ++ +K+ SI++ + ++ ++++++EK+ P N A +K +L +E +
Sbjct: 423 GMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKAM 482
Query: 431 AQSRHDEVDMERIKKRLQELEASRDS----KVKDAKAIRLAEMNRKNRVENFKNASELKR 486
A+ D+ ++I+ +L ELE ++ + K+ AI + +N++NR N SE
Sbjct: 483 AEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAI--SYINQRNREWNIVE-SEKAL 539
Query: 487 VNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANGEEGATGEVG 546
V S DPF+RR KP T +N V + A G
Sbjct: 540 VAESHNMKNQQMDPFTRRQC--------KP----TIVSNSRDPAVQAAILAQLNAKYGSG 587
Query: 547 MAATEAALEAAAGAGKLVDTN--APLDLGTESNMLHDFELDISL 588
+ +A E + G GK D N + DL + +HDF++ I L
Sbjct: 588 VLP-DAPKEMSKGQGKDKDLNSKSASDLSEDLFKVHDFDVKIDL 630
>gi|427796453|gb|JAA63678.1| hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 669
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 128/255 (50%), Gaps = 21/255 (8%)
Query: 259 TYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPD 318
T +++ +I + R KL +W PFF + ++GCFVR+GIG + +YR+ + D E
Sbjct: 322 TKEEVGKIRLSRHKLERWVHAPFFAKTVIGCFVRIGIGSNNGRAVYRVAQI--TDVVETA 379
Query: 319 RSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQ 378
+ Y L T K L + G + R + VS+ E EF +W + P+ +
Sbjct: 380 KVYALGRCRTNKGLRLKHGKQERVFR--LEFVSNQDFTESEFLKWKEVMALEGASFPTTE 437
Query: 379 DVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSR--HD 436
+V K + IQ + Y + V+ ++ EK+ P N A K +L ++ E+A+ + H+
Sbjct: 438 EVTRKVKDIQDALNYQYKESDVETIVSEKQRFKRNPHNYAMRKTQLMKQKEMAEQKGDHE 497
Query: 437 EV-----DMERIKKRLQELEASRDSKVKDAKAIRLAEMNRKNRVENFKNASELKR--VNT 489
E ++E++++R +EL+ R S + ++ +N +NR+ KN E++R +
Sbjct: 498 EALRLSGELEQLEERARELDKQRTSTISA-----ISYINERNRL---KNIVEIERAILEE 549
Query: 490 SLKAGEAGYDPFSRR 504
+ E DPF+RR
Sbjct: 550 AKLNKEKADDPFTRR 564
>gi|410897823|ref|XP_003962398.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Takifugu
rubripes]
Length = 675
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 101/391 (25%), Positives = 178/391 (45%), Gaps = 44/391 (11%)
Query: 261 DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRS 320
+++ I + R KL +W PFF + + GCFVR+GIG S + P+YR+ + VD E +
Sbjct: 321 EELNRIRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNSSSKPVYRVAEI--VDVVETAKV 378
Query: 321 YKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDV 380
Y+L + T K L + G ++ R + VS+ E EF +W + S ++P+ ++
Sbjct: 379 YQLGSTRTNKGLQLRHGGDTRVFR--LEFVSNQEFAESEFIKWKEAMMVASMQVPTLDEI 436
Query: 381 LEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDM 440
+K+++I++ + ++ ++ +++EK P N A +K +L ++ +A+ D +
Sbjct: 437 TKKEQTIKEALNYKFNDKDIEDIVKEKDRFRKAPPNYAMKKTQLLKDKAMAEESGDGDRV 496
Query: 441 ERIKKRLQELEASRDS----KVKDAKAIRLAEMNRKNRVENFKNASELKRVNTSLKAGEA 496
+ I+ L ELE ++ + K+ AI + +N++NR N SE V A
Sbjct: 497 KVIQDELNELEERAEALDRQRTKNISAI--SYINQRNRSWNIVE-SEKALVAEGQNAKNQ 553
Query: 497 GYDPFSRRWTRSRNYYISKPGE-EVTAEANGDKNGVPGGANGEEGATGEVGMAATEAALE 555
DPF+RR + + +S + V A N G +G + ++ E
Sbjct: 554 QMDPFTRR--QCKPTMVSNARDPSVHAAILAHLNQKYGSGSGADPSSPENNKVTN----- 606
Query: 556 AAAGAGKLVDTNAP-LDLGTESNMLHDFELDISLNALKKFGGPQGVLAGFMARKQRIEAT 614
K D P DL + +HDF++ I L V + +
Sbjct: 607 -----AKEKDVPKPTTDLSEDLFKVHDFDVKIDLQVPSAEAKSLSVSSNAL--------- 652
Query: 615 VGCQVPENDG--RRHALTLTVGDYKRRRGLL 643
P DG RR +L + DYK+RRGL+
Sbjct: 653 -----PVKDGAPRR---SLNLEDYKKRRGLI 675
>gi|427796683|gb|JAA63793.1| hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 670
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 128/255 (50%), Gaps = 21/255 (8%)
Query: 259 TYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPD 318
T +++ +I + R KL +W PFF + ++GCFVR+GIG + +YR+ + D E
Sbjct: 323 TKEEVGKIRLSRHKLERWVHAPFFAKTVIGCFVRIGIGSNNGRAVYRVAQI--TDVVETA 380
Query: 319 RSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQ 378
+ Y L T K L + G + R + VS+ E EF +W + P+ +
Sbjct: 381 KVYALGRCRTNKGLRLKHGKQERVFR--LEFVSNQDFTESEFLKWKEVMALEGASFPTTE 438
Query: 379 DVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSR--HD 436
+V K + IQ + Y + V+ ++ EK+ P N A K +L ++ E+A+ + H+
Sbjct: 439 EVTRKVKDIQDALNYQYKESDVETIVSEKQRFKRNPHNYAMRKTQLMKQKEMAEQKGDHE 498
Query: 437 EV-----DMERIKKRLQELEASRDSKVKDAKAIRLAEMNRKNRVENFKNASELKR--VNT 489
E ++E++++R +EL+ R S + ++ +N +NR+ KN E++R +
Sbjct: 499 EALRLSGELEQLEERARELDKQRTSTISA-----ISYINERNRL---KNIVEIERAILEE 550
Query: 490 SLKAGEAGYDPFSRR 504
+ E DPF+RR
Sbjct: 551 AKLNKEKADDPFTRR 565
>gi|303288674|ref|XP_003063625.1| PAF1 complex protein Rtf1 [Micromonas pusilla CCMP1545]
gi|226454693|gb|EEH51998.1| PAF1 complex protein Rtf1 [Micromonas pusilla CCMP1545]
Length = 636
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 138/270 (51%), Gaps = 20/270 (7%)
Query: 263 IKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEP----- 317
I++I ++R L KW EP+FE+ C VR+GI R++ + + VD E
Sbjct: 229 IRKIILKRETLEKWVTEPYFEQCAPKCMVRIGIERNRETGENKYVVAEIVDVAEGKHGNY 288
Query: 318 ---DRSY------KLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVE 368
+ SY K + T K+L + +G+ S+ + + VS++ E+ +W +++E
Sbjct: 289 VLGEYSYGHHPQNKEPPKKTGKWLILRYGDASTDRAFSIDKVSNAEVTAGEYVKWCKKME 348
Query: 369 RNSGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSA-SSRPLNVAAEKDRLRRE 427
+ RMP +DV +E+I+ +++ Y++ V++M+Q+K+ N+A EK+ +RR
Sbjct: 349 ESGRRMPQLRDVAAAEENIKFASSYRYTSEDVQKMIQKKREGRDGLAPNLAMEKETIRRL 408
Query: 428 LEVAQSRHDEVDMERIKKRLQELEASRDSKV-KDAKAIRLAEMNRKNRVENFKNASELKR 486
+ A++ D+ +E + RL+ + + ++ K + +A +N++N N N S +
Sbjct: 409 IARAKAEGDDEAVETLTARLEVVMETLTKQLDKGGRQATMANINKRNNQLNDANLSRIAS 468
Query: 487 VNTSLKAGEA----GYDPFSRRWTRSRNYY 512
+ A A DPFSRR T++ YY
Sbjct: 469 EQIARAASGAPDKSADDPFSRRKTKAATYY 498
>gi|341879382|gb|EGT35317.1| hypothetical protein CAEBREN_03042 [Caenorhabditis brenneri]
Length = 610
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 98/345 (28%), Positives = 166/345 (48%), Gaps = 34/345 (9%)
Query: 259 TYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGR-SKNGPIYRLCMVRNVDATEP 317
T +++ + R KL+ PFF+ +VGC+VR+G G+ S + YR+ + V+ T
Sbjct: 255 TLAELRRARLSRHKLSLMIHAPFFDSTVVGCYVRLGQGQMSGSESKYRIWKIVGVEQT-- 312
Query: 318 DRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSK 377
++ Y LE + T K + +G S ++M VS+S + EF +WL + + G +P+
Sbjct: 313 NKVYDLEGKKTNKSIKCQFGR--SERPFRMQFVSNSEFEQVEFDEWLNATKAH-GNVPTV 369
Query: 378 QDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDE 437
+ +KK I+K YS V M+ EK N A K L ++ E+AQ R D
Sbjct: 370 DIMDKKKMDIEKAVNHKYSDKEVDAMIVEKSKFQKVTRNFAMTKAGLAKQKELAQQRGDI 429
Query: 438 VDMERIKKRLQELEASRDSKVKD-AKAIR-LAEMNRKNRVENFKNASELKRVNTSLKAGE 495
+ ER++K + E+E D K+ +K+IR +A +N +NR + K+ + ++ LK E
Sbjct: 430 REAERVQKEIDEIERHADELDKERSKSIRGIAFINHRNRTQ-IKD----QVLSGKLKIEE 484
Query: 496 AGY-DPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANGEEGATGEVGMAATEAAL 554
DPF+R+ K G + + G K+ + G + + T +
Sbjct: 485 NSQDDPFTRK----------KGGMRIVS---GSKSKLDGTLSASSSMSNLADADKTPSMA 531
Query: 555 EAAAGAGKLVDTNAPLDLGTESNM--LHDFELDISLNALKKFGGP 597
+A L + ++ ++NM LHDF+LDI + LK F P
Sbjct: 532 KAT-----LPPPPSSKEIKKKTNMSSLHDFDLDIDFDKLKDFTTP 571
>gi|74187158|dbj|BAE22595.1| unnamed protein product [Mus musculus]
Length = 391
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 159/336 (47%), Gaps = 26/336 (7%)
Query: 261 DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRS 320
+++ + + R KL +W PFF + + GCFVR+GIG + P+YR+ + V E +
Sbjct: 51 EELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAEITGV--VETAKV 108
Query: 321 YKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDV 380
Y+L T K L + GN+ R + VS+ E EF +W + ++P+ ++
Sbjct: 109 YQLGGTRTNKGLQLRHGNDQRVFR--LEFVSNQEFTESEFMKWKEAMFSAGMQLPTLDEI 166
Query: 381 LEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDM 440
+K+ SI++ + ++ ++++++EK+ P N A +K +L +E +A+ D+
Sbjct: 167 NKKELSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKAMAEDLGDQDKA 226
Query: 441 ERIKKRLQELEASRDS----KVKDAKAIRLAEMNRKNRVENFKNASELKRVNTSLKAGEA 496
++I+ +L ELE ++ + K+ AI + +N++NR N SE V S +
Sbjct: 227 KQIQDQLNELEERAEALDRQRTKNISAI--SYINQRNREWNIVE-SEKALVAESHNMRKQ 283
Query: 497 GYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANGEEGATGEVGMAATEAALEA 556
DPF+RR + T +N V + A G+ +A E
Sbjct: 284 QMDPFTRRQCKP------------TIVSNSRDPAVQAAILAQLNAKYGSGVLP-DAPKEM 330
Query: 557 AAGAGKLVDTNAPL--DLGTESNMLHDFELDISLNA 590
+ G GK D N+ DL + +HDF++ I L
Sbjct: 331 SKGQGKDKDLNSKTASDLSEDLFKVHDFDVKIDLQV 366
>gi|45198784|ref|NP_985813.1| AFR266Wp [Ashbya gossypii ATCC 10895]
gi|44984813|gb|AAS53637.1| AFR266Wp [Ashbya gossypii ATCC 10895]
gi|374109044|gb|AEY97950.1| FAFR266Wp [Ashbya gossypii FDAG1]
Length = 562
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 139/577 (24%), Positives = 242/577 (41%), Gaps = 117/577 (20%)
Query: 1 MADLENLLLEAAGR-----------TNSAGRNRHSASSSKRRREGSYSGSDSRDDDSDDN 49
M+DL+ LL A S R++H +S SK+RR D D+D+D++
Sbjct: 1 MSDLDEDLLALAAGEDGDDGDEDFGVTSQKRSKHDSSGSKKRRVMDEESGD--DEDNDND 58
Query: 50 RGYGSRKPSGSQVPLKKRLDPAERDDDQGSQEEGDYDGGASEHE--GDSSNESDDDNHGQ 107
G + P E D+G + D + + G +++D ++
Sbjct: 59 AGDEEDEDEDDYNP------GTEYGFDEGHEASEDEVEEENPYPLLGKYRDDADREHIEN 112
Query: 108 MTELEREMMIFER-------DDKKVDKNLRDKFRSRREERSTRSTKETPPLPSSRSARLA 160
M E+ERE ++FER ++KV LR++ ++ R ++ R K+ L RS+ +
Sbjct: 113 MPEMERETLLFERSQEMQKYQERKV---LRERAKNIRAQQQRRQQKDGSAL---RSSGRS 166
Query: 161 ARSADRAAAKDDALNELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSPVKRKAFTPAGLS 220
R+ + +D L+ELR +R K+ +G
Sbjct: 167 TRTTGHSDLRDSKLSELRKQRAKK--------------------------------SGNY 194
Query: 221 SSSQSESESRSHSDDEGSTGDGGMADSDDDGAPGSGRPTY-------------------- 260
S E +S HSDD + D++DD P GR Y
Sbjct: 195 DYSAGEDDS-DHSDDYVDS------DNEDDYDPHDGRQLYREEADEVKWAEDDLDRDAEL 247
Query: 261 DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNG--PIYRLCMVRNVDATEPD 318
DD +I + RS +AK+ P F + + GC+ RV IG K+ +YR+ + V +P
Sbjct: 248 DDFNKIKVGRSFVAKFCFYPEFNQRVQGCYGRVNIGVDKHTGQAMYRMVKIEKVFLQKP- 306
Query: 319 RSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQ 378
Y + T +Y VT G + +QM SD P L+ E++++L ++ ++ PS
Sbjct: 307 --YNMGKFFTNQYFGVTQGKDRKV--FQMNFFSDGPILQPEYERYLNQIAKHDINKPSLY 362
Query: 379 DVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRP--LNVAAEKDRLRRELEVAQSRHD 436
+ K + + + + Q+++ + + + N EK LR +L+ A+ ++
Sbjct: 363 TLNNKAKDLTNFVSQPMTPKLTDQIVRNRMQFNKKLTGTNAVLEKTVLRDKLQYARDTNN 422
Query: 437 EVDMERIKKRLQELEASRDSKVK----DAKAIR----LAEMNRKNRVENFKNASELKRVN 488
E D+ + +L+ LE S K D IR L NRK ++ ++ +K+ +
Sbjct: 423 EKDIAKYSSQLKNLEKRMSSYEKHHENDQTGIRKLDALTSKNRKVNLDKIRHVENVKKED 482
Query: 489 TSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEAN 525
++ DPFSR TR++ YY +E+ E N
Sbjct: 483 SA--TLNVKTDPFSRLKTRTKIYY-----QEIQQEEN 512
>gi|320168140|gb|EFW45039.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 784
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 138/289 (47%), Gaps = 13/289 (4%)
Query: 232 HSDDEG--STGDGGMADSDDDGAPGSGRPTYDDIKEITIRRSKLAKWFMEPFFEELIVGC 289
HSD E DG A S DD P T DD+ + RSKL K+ PFF + I C
Sbjct: 413 HSDQETDRQRDDGATAMSIDDDQPPEAPLTLDDLNRARLTRSKLEKYVHAPFFAKSIRNC 472
Query: 290 FVRVGIGRSKNGPIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAM 349
+VRV IG S YRL V V+ E ++Y+L T K + + + S +++
Sbjct: 473 YVRVNIGVSNGQTTYRLAKVAGVE--EGKKAYQLGATRTNKLIELDYCG--SHRSYRLEY 528
Query: 350 VSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKS 409
VS++ E EF +W ++ N +PS ++ + + IQ ++ V ++ + MLQE+
Sbjct: 529 VSNTDFTESEFYKWKDDMAFNRIPLPSLDELRHRSKQIQSMSQHVRTSQVIDAMLQERNR 588
Query: 410 ASSRPLNVAAEKDRLRRELEVAQSRHD-EVDMERIKKRLQELEASRDSKVKDA--KAIRL 466
P +A K L E+ V + + D + + ++++L E EA+ + K A +
Sbjct: 589 FQKAPEGLAYAKTSLAHEISVLEQQGDPQGLLPGLREKLAETEAAAEENNKKATENLSLV 648
Query: 467 AEMNRKNRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISK 515
+++N KNR KN S+L R + K + DPF RR R + K
Sbjct: 649 SQINAKNR---HKNLSDLGRKASGEKV-VSKLDPFERRACRPVMFAFPK 693
>gi|6321193|ref|NP_011270.1| Rtf1p [Saccharomyces cerevisiae S288c]
gi|2506764|sp|P53064.2|RTF1_YEAST RecName: Full=RNA polymerase-associated protein RTF1
gi|1841839|gb|AAB47535.1| Rtf1p [Saccharomyces cerevisiae]
gi|1945310|emb|CAA96963.1| RTF1 [Saccharomyces cerevisiae]
gi|190407177|gb|EDV10444.1| protein RTF1 [Saccharomyces cerevisiae RM11-1a]
gi|259146273|emb|CAY79530.1| Rtf1p [Saccharomyces cerevisiae EC1118]
gi|285811975|tpg|DAA07875.1| TPA: Rtf1p [Saccharomyces cerevisiae S288c]
gi|323355157|gb|EGA86985.1| Rtf1p [Saccharomyces cerevisiae VL3]
Length = 558
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 127/490 (25%), Positives = 206/490 (42%), Gaps = 89/490 (18%)
Query: 76 DQGSQEEGDYDGGASEHEGDSSNESDDDNHGQMTELEREMMIFERDDKKVDKNLRDKFRS 135
D GS+EE + EG +ESD ++ + E+ERE ++FER R FR+
Sbjct: 68 DYGSEEEEE--ANPFPLEGKYKDESDREHLESLPEMERETLLFERSQIMQKYQERKLFRA 125
Query: 136 R---REERSTRSTKETPPLPSSRSARLAARSADRAAAKDDALNELRAKRLKQQDPEAHRR 192
R +E+ R+ + SR R + RS D ++A +L Q + R+
Sbjct: 126 RGRDMKEQQQRAKND----EDSRKTRASTRSTHATGHSD-----IKASKLSQLKKQRARK 176
Query: 193 LRDASRGGSGSRVLSPVKRKAFTPAGLSSSSQSESESRSHSDDEGS-TGDGGMADSDDDG 251
R S + + + DDEGS GD D++
Sbjct: 177 NRHYS-------------------DNEDEDDEEDYREEDYKDDEGSEYGD------DEEY 211
Query: 252 APGSGRPTYD---------------------DIKEITIRRSKLAKWFMEPFFEELIVGCF 290
P R TYD D ++ I RS +AK+ P FE+ + GC+
Sbjct: 212 NPFDRRDTYDKREEVEWAEEEDEQDREPEISDFNKLRIGRSFVAKFCFYPGFEDAVKGCY 271
Query: 291 VRVGIGRSKNG--PIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMA 348
RV +G K YR+ + V +P Y + T +Y VT G + +QM
Sbjct: 272 GRVNVGTDKRTGKTSYRMVRIERVFLQKP---YNMGKFYTNQYFGVTQGKDRKV--FQMN 326
Query: 349 MVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEK-KESIQKINTFVYSAAT---VKQML 404
SD E+E++++LR ++ + PS + K KE + +NT + T V+ +
Sbjct: 327 YFSDGLFAEDEYQRYLRALDNSQMIKPSLHSLSNKTKEVMDFVNTPLTDKTTDEVVRHRM 386
Query: 405 QEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMER-------IKKRLQELEASRDSK 457
Q K S N EK LR +L+ A+ ++E D+ + +KR+ E ++
Sbjct: 387 QFNKKLSG--TNAVLEKTVLREKLQYAKETNNEKDIAKYSAQLRNFEKRMSVYEKHHEND 444
Query: 458 VKDAKAI-RLAEMNRKNRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKP 516
D K + L NRK + N +NA +K+ +++ ++ DPFSR TR++ YY
Sbjct: 445 QSDIKKLGELTSKNRKLNMSNIRNAEHVKKEDSN--NFDSKSDPFSRLKTRTKVYY---- 498
Query: 517 GEEVTAEANG 526
+E+ E N
Sbjct: 499 -QEIQKEENA 507
>gi|392299200|gb|EIW10294.1| Rtf1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 558
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 127/490 (25%), Positives = 206/490 (42%), Gaps = 89/490 (18%)
Query: 76 DQGSQEEGDYDGGASEHEGDSSNESDDDNHGQMTELEREMMIFERDDKKVDKNLRDKFRS 135
D GS+EE + EG +ESD ++ + E+ERE ++FER R FR+
Sbjct: 68 DYGSEEEEE--ANPFPLEGKYKDESDREHLESLPEMERETLLFERSQIMQKYQERKLFRA 125
Query: 136 R---REERSTRSTKETPPLPSSRSARLAARSADRAAAKDDALNELRAKRLKQQDPEAHRR 192
R +E+ R+ + SR R + RS D ++A +L Q + R+
Sbjct: 126 RGRDMKEQQQRAKND----EDSRKTRASTRSTHATGHSD-----IKASKLSQLKKQRARK 176
Query: 193 LRDASRGGSGSRVLSPVKRKAFTPAGLSSSSQSESESRSHSDDEGS-TGDGGMADSDDDG 251
R S + + + DDEGS GD D++
Sbjct: 177 NRHYS-------------------DNEDEDDEEDYREEDYKDDEGSEYGD------DEEY 211
Query: 252 APGSGRPTYD---------------------DIKEITIRRSKLAKWFMEPFFEELIVGCF 290
P R TYD D ++ I RS +AK+ P FE+ + GC+
Sbjct: 212 NPFDRRDTYDKREEVEWAEEEDEQDREPQISDFNKLRIGRSFVAKFCFYPGFEDAVKGCY 271
Query: 291 VRVGIGRSKNG--PIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMA 348
RV +G K YR+ + V +P Y + T +Y VT G + +QM
Sbjct: 272 GRVNVGTDKRTGKTSYRMVRIERVFLQKP---YNMGKFYTNQYFGVTQGKDRKV--FQMN 326
Query: 349 MVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEK-KESIQKINTFVYSAAT---VKQML 404
SD E+E++++LR ++ + PS + K KE + +NT + T V+ +
Sbjct: 327 YFSDGLFAEDEYQRYLRALDNSQMIKPSLHSLSNKTKEVMDFVNTPLTDKTTDEVVRHRM 386
Query: 405 QEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMER-------IKKRLQELEASRDSK 457
Q K S N EK LR +L+ A+ ++E D+ + +KR+ E ++
Sbjct: 387 QFNKKLSG--TNAVLEKTVLREKLQYAKETNNEKDIAKYSAQLRNFEKRMSVYEKHHEND 444
Query: 458 VKDAKAI-RLAEMNRKNRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKP 516
D K + L NRK + N +NA +K+ +++ ++ DPFSR TR++ YY
Sbjct: 445 QSDIKKLGELTSKNRKLNMSNIRNAEHVKKEDSN--NFDSKSDPFSRLKTRTKVYY---- 498
Query: 517 GEEVTAEANG 526
+E+ E N
Sbjct: 499 -QEIQKEENA 507
>gi|207345570|gb|EDZ72345.1| YGL244Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 558
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 127/490 (25%), Positives = 206/490 (42%), Gaps = 89/490 (18%)
Query: 76 DQGSQEEGDYDGGASEHEGDSSNESDDDNHGQMTELEREMMIFERDDKKVDKNLRDKFRS 135
D GS+EE + EG +ESD ++ + E+ERE ++FER R FR+
Sbjct: 68 DYGSEEEEE--ANPFPLEGKYKDESDREHLESLPEMERETLLFERSQIMQKYQERKLFRA 125
Query: 136 R---REERSTRSTKETPPLPSSRSARLAARSADRAAAKDDALNELRAKRLKQQDPEAHRR 192
R +E+ R+ + SR R + RS D ++A +L Q + R+
Sbjct: 126 RGRDMKEQQQRAKND----EDSRKTRASTRSTHATGHSD-----IKASKLSQLKKQRARK 176
Query: 193 LRDASRGGSGSRVLSPVKRKAFTPAGLSSSSQSESESRSHSDDEGS-TGDGGMADSDDDG 251
R S + + + DDEGS GD D++
Sbjct: 177 NRHYS-------------------DNEDEDDEEDYREEDYKDDEGSEYGD------DEEY 211
Query: 252 APGSGRPTYD---------------------DIKEITIRRSKLAKWFMEPFFEELIVGCF 290
P R TYD D ++ I RS +AK+ P FE+ + GC+
Sbjct: 212 NPFDRRDTYDKREEVEWAEEEDEQDREPEISDFNKLRIGRSFVAKFCFYPGFEDAVKGCY 271
Query: 291 VRVGIGRSKNG--PIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMA 348
RV +G K YR+ + V +P Y + T +Y VT G + +QM
Sbjct: 272 GRVNVGTDKRTGKTSYRMVRIERVFLQKP---YNMGKFYTNQYFGVTQGKDRKV--FQMN 326
Query: 349 MVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEK-KESIQKINTFVYSAAT---VKQML 404
SD E+E++++LR ++ + PS + K KE + +NT + T V+ +
Sbjct: 327 YFSDGLFAEDEYQRYLRALDNSQMIKPSLHSLSNKTKEVMDFVNTPLTDKTTDEVVRHRM 386
Query: 405 QEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMER-------IKKRLQELEASRDSK 457
Q K S N EK LR +L+ A+ ++E D+ + +KR+ E ++
Sbjct: 387 QFNKKLSG--TNAVLEKTVLREKLQYAKETNNEKDIAKYSAQLRNFEKRMSVYEKHHEND 444
Query: 458 VKDAKAI-RLAEMNRKNRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKP 516
D K + L NRK + N +NA +K+ +++ ++ DPFSR TR++ YY
Sbjct: 445 QSDIKKLGELTSKNRKLNMSNIRNAEHVKKEDSN--NFDSKSDPFSRLKTRTKVYY---- 498
Query: 517 GEEVTAEANG 526
+E+ E N
Sbjct: 499 -QEIQKEENA 507
>gi|349577993|dbj|GAA23159.1| K7_Rtf1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 558
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 127/490 (25%), Positives = 206/490 (42%), Gaps = 89/490 (18%)
Query: 76 DQGSQEEGDYDGGASEHEGDSSNESDDDNHGQMTELEREMMIFERDDKKVDKNLRDKFRS 135
D GS+EE + EG +ESD ++ + E+ERE ++FER R FR+
Sbjct: 68 DYGSEEEEE--ANPFPLEGKYKDESDREHLESLPEMERETLLFERSQIMQKYQERKLFRA 125
Query: 136 R---REERSTRSTKETPPLPSSRSARLAARSADRAAAKDDALNELRAKRLKQQDPEAHRR 192
R +E+ R+ + SR R + RS D ++A +L Q + R+
Sbjct: 126 RGRDMKEQQQRAKND----EDSRKTRASTRSTHATGHSD-----IKASKLSQLKKQRARK 176
Query: 193 LRDASRGGSGSRVLSPVKRKAFTPAGLSSSSQSESESRSHSDDEGS-TGDGGMADSDDDG 251
R S + + + DDEGS GD D++
Sbjct: 177 NRHYS-------------------DNEDEDDEEDYREEDYKDDEGSEYGD------DEEY 211
Query: 252 APGSGRPTYD---------------------DIKEITIRRSKLAKWFMEPFFEELIVGCF 290
P R TYD D ++ I RS +AK+ P FE+ + GC+
Sbjct: 212 NPFDRRDTYDKREEVEWAEEEDEQDREPEISDFNKLRIGRSFVAKFCFYPGFEDAVKGCY 271
Query: 291 VRVGIGRSKNG--PIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMA 348
RV +G K YR+ + V +P Y + T +Y VT G + +QM
Sbjct: 272 GRVNVGTDKRTGKTSYRMVRIERVFLQKP---YNMGKFYTNQYFGVTQGKDRKV--FQMN 326
Query: 349 MVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEK-KESIQKINTFVYSAAT---VKQML 404
SD E+E++++LR ++ + PS + K KE + +NT + T V+ +
Sbjct: 327 YFSDGLFAEDEYQRYLRALDNSQMIKPSLHSLSNKTKEVMDFVNTPLTDKTTDEVVRHRM 386
Query: 405 QEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMER-------IKKRLQELEASRDSK 457
Q K S N EK LR +L+ A+ ++E D+ + +KR+ E ++
Sbjct: 387 QFNKKLSG--TNAVLEKTVLREKLQYAKETNNEKDIAKYSAQLRNFEKRMSVYEKHHEND 444
Query: 458 VKDAKAI-RLAEMNRKNRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKP 516
D K + L NRK + N +NA +K+ +++ ++ DPFSR TR++ YY
Sbjct: 445 QSDIKKLGELTSKNRKLNMSNIRNAEHVKKEDSN--NFDSKSDPFSRLKTRTKVYY---- 498
Query: 517 GEEVTAEANG 526
+E+ E N
Sbjct: 499 -QEIQKEENA 507
>gi|47221320|emb|CAG13256.1| unnamed protein product [Tetraodon nigroviridis]
Length = 675
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 100/391 (25%), Positives = 177/391 (45%), Gaps = 44/391 (11%)
Query: 261 DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRS 320
+++ I + R KL +W PFF + + GCFVR+GIG S + P+YR+ + VD E +
Sbjct: 321 EELNRIRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNSSSKPVYRVAEI--VDVVETAKV 378
Query: 321 YKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDV 380
Y+L + T K L + G ++ R + VS+ E EF +W + ++P+ ++
Sbjct: 379 YQLGSTRTNKGLQLRHGADTRVFR--LEFVSNQEFAESEFIKWKEAMMVAGMQVPTLDEI 436
Query: 381 LEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDM 440
+K+++I++ + ++ ++ +++EK P N A +K +L ++ +A+ D +
Sbjct: 437 TKKEQTIKEALNYKFNDKDIEDIVKEKDRFRKAPPNYAMKKTQLLKDKAMAEESGDGDRV 496
Query: 441 ERIKKRLQELEASRDS----KVKDAKAIRLAEMNRKNRVENFKNASELKRVNTSLKAGEA 496
+ I+ L ELE ++ + K+ AI + +N++NR N SE V A
Sbjct: 497 KVIQDELNELEERAEALDRQRTKNISAI--SYINQRNRSWNIVE-SEKALVAEGQNAKNQ 553
Query: 497 GYDPFSRRWTRSRNYYISKPGE-EVTAEANGDKNGVPGGANGEEGATGEVGMAATEAALE 555
DPF+RR + + +S + V A N G +G + ++ E
Sbjct: 554 QMDPFTRR--QCKPTMVSNARDPSVHAAILAHLNQKYGSGSGADPSSPEKNKVTN----- 606
Query: 556 AAAGAGKLVDTNAP-LDLGTESNMLHDFELDISLNALKKFGGPQGVLAGFMARKQRIEAT 614
K D P DL + +HDF++ I L V + +
Sbjct: 607 -----AKEKDVPKPTTDLSEDLFKVHDFDVKIDLQVPSAEAKSLSVSSNAL--------- 652
Query: 615 VGCQVPENDG--RRHALTLTVGDYKRRRGLL 643
P DG RR +L + DYK+RRGL+
Sbjct: 653 -----PVKDGAPRR---SLNLEDYKKRRGLI 675
>gi|365765720|gb|EHN07226.1| Rtf1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 558
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 127/490 (25%), Positives = 206/490 (42%), Gaps = 89/490 (18%)
Query: 76 DQGSQEEGDYDGGASEHEGDSSNESDDDNHGQMTELEREMMIFERDDKKVDKNLRDKFRS 135
D GS+EE + EG +ESD ++ + E+ERE ++FER R FR+
Sbjct: 68 DYGSEEEEE--TNPFPLEGKYKDESDREHLESLPEMERETLLFERSQIMQKYQERKLFRA 125
Query: 136 R---REERSTRSTKETPPLPSSRSARLAARSADRAAAKDDALNELRAKRLKQQDPEAHRR 192
R +E+ R+ + SR R + RS D ++A +L Q + R+
Sbjct: 126 RGRDMKEQQQRAKND----EDSRKTRASTRSTHATGHSD-----IKASKLSQLKKQRARK 176
Query: 193 LRDASRGGSGSRVLSPVKRKAFTPAGLSSSSQSESESRSHSDDEGS-TGDGGMADSDDDG 251
R S + + + DDEGS GD D++
Sbjct: 177 NRHYS-------------------DNEDEDDEEDYREEDYKDDEGSEYGD------DEEY 211
Query: 252 APGSGRPTYD---------------------DIKEITIRRSKLAKWFMEPFFEELIVGCF 290
P R TYD D ++ I RS +AK+ P FE+ + GC+
Sbjct: 212 NPFDRRDTYDKREEVEWAEEEDEQDREPEISDFNKLRIGRSFVAKFCFYPGFEDAVKGCY 271
Query: 291 VRVGIGRSKNG--PIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMA 348
RV +G K YR+ + V +P Y + T +Y VT G + +QM
Sbjct: 272 GRVNVGTDKRTGKTSYRMVRIERVFLQKP---YNMGKFYTNQYFGVTQGKDRKV--FQMN 326
Query: 349 MVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEK-KESIQKINTFVYSAAT---VKQML 404
SD E+E++++LR ++ + PS + K KE + +NT + T V+ +
Sbjct: 327 YFSDGLFAEDEYQRYLRALDNSQMIKPSLHSLSXKTKEVMDFVNTPLTDKTTDEVVRHRM 386
Query: 405 QEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMER-------IKKRLQELEASRDSK 457
Q K S N EK LR +L+ A+ ++E D+ + +KR+ E ++
Sbjct: 387 QFNKKLSG--TNAVLEKTVLREKLQYAKETNNEKDIAKYSAQLRNFEKRMSVYEKHHEND 444
Query: 458 VKDAKAI-RLAEMNRKNRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKP 516
D K + L NRK + N +NA +K+ +++ ++ DPFSR TR++ YY
Sbjct: 445 QSDIKKLGELTSKNRKLNMSNIRNAEHVKKEDSN--NFDSKSDPFSRLKTRTKVYY---- 498
Query: 517 GEEVTAEANG 526
+E+ E N
Sbjct: 499 -QEIQKEENA 507
>gi|194754930|ref|XP_001959745.1| GF11885 [Drosophila ananassae]
gi|190621043|gb|EDV36567.1| GF11885 [Drosophila ananassae]
Length = 781
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 98/396 (24%), Positives = 170/396 (42%), Gaps = 60/396 (15%)
Query: 259 TYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPD 318
T DD+ ++ + R K+ ++ P FE ++ CFVR+ IG + P+YR+ + V E
Sbjct: 435 TRDDLNKLRLSRYKMERFVNLPIFEATVLNCFVRISIGNNGQKPVYRVAEI--VGVVETG 492
Query: 319 RSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQ 378
+ Y L T + L + +G+ R + +S+ E EF +W+ + + +MPS
Sbjct: 493 KIYNLGTTRTNRGLRLKYGSHERVFR--LEFISNQEFTENEFNKWVEMCKESQVQMPSMD 550
Query: 379 DVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEV 438
+ K I+K + + V ++++EK +RP N A +K L +E + A R D
Sbjct: 551 LIEIKANDIKKALNYEFKDEDVDKIVEEKNRFRNRPTNYAMKKTCLMKERDAAMLRGDYD 610
Query: 439 DMERIKKRLQELE--ASRDSKVKDAKAIRLAEMNRKNRVENFKNAS----ELKRVNTSLK 492
+ + +++ ELE AS K + ++ +N +NR +N ++A E R N LK
Sbjct: 611 IAQDLGQQIDELESRASELDKRRSHTLNLISYINDRNRKKNVQDAEKAIMEEARANKGLK 670
Query: 493 AGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANGEEGATGEVGMAATEA 552
DPF+RR T+ R G GG EE + +
Sbjct: 671 IS----DPFTRRITQPRM-------------------GFKGGKKDEEEML-QAPLPPPPP 706
Query: 553 ALEAAAGAGKLVDTNAPLDLGTESNM-LHDFELDI----SLNALKKFGGPQGVLAGFMAR 607
+ A AG + P D S LHDF++D+ +N+ P A +++
Sbjct: 707 GKKKANEAGPSNSSAKPTDSKDYSLYSLHDFDIDLDVPLPVNSTNSVPKPASKPAETVSK 766
Query: 608 KQRIEATVGCQVPENDGRRHALTLTVGDYKRRRGLL 643
+ +L + DYK++RGL+
Sbjct: 767 R---------------------SLNLEDYKKKRGLI 781
>gi|146422167|ref|XP_001487025.1| hypothetical protein PGUG_00402 [Meyerozyma guilliermondii ATCC
6260]
Length = 539
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 112/445 (25%), Positives = 200/445 (44%), Gaps = 62/445 (13%)
Query: 93 EGDSSNESDDDNHGQMTELEREMMIFERDDKKVDKNLRDKFRSRREERSTRSTKETPPLP 152
EG +E D +N M E++RE ++FER + N + + R ++++ + +
Sbjct: 71 EGKYRDEEDRENLLNMDEMKREEILFERSQEMESYNEKIYLQQRLKQQAAQDSPR----- 125
Query: 153 SSRSARLAARSADRAAAKDDALNELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSPVKRK 212
++RS++ SA + +K D L+ELR +R ++Q RR+
Sbjct: 126 ATRSSKRNKTSA-KTTSKLDKLSELRKQREQKQ-----RRMDGDFDDDEEEEDEDDNLDD 179
Query: 213 AFTPAGLSSSSQSESESRSHSDDEGSTGDGGMADSDDDGAPGSGRPTY----------DD 262
G G D +++ GSGR + DD
Sbjct: 180 EIADLG---------------------GYEDDYDDEEEVKWGSGRSKFAPRSYVRASLDD 218
Query: 263 IKEITIRRSKLAKWFMEPFFEELIVGCF--VRVGIGRSKNGPIYRLCMVRNVDATEPDRS 320
I +I + RS L K+ F E I+ CF V VG+ R+ P+YR+ + +V + P +
Sbjct: 219 INKIVVGRSMLTKYCYYNGFNETILDCFTKVNVGVDRATRQPLYRMVRIDDVKSI-PQKP 277
Query: 321 YKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDV 380
Y + YL VT N++ + + + SDSP +E ++ E+E+ +P DV
Sbjct: 278 YSVAGSKIDLYLTVTQ-NKNQTKEFPLTVFSDSPISTQELDRYKIELEKTGEELPYVDDV 336
Query: 381 LEKKESIQKINTFVYSAATVKQMLQEKKSASSRP--LNVAAEKDRLRRELEVAQSRHDEV 438
EK E +Q + T S V +M++ K+ + N EK +L L++A+ +
Sbjct: 337 NEKHELLQHLTTRGLSDKDVNEMIERKQKLQANVGGYNAVFEKSKLLDLLKIAKQEGNTS 396
Query: 439 DMERIKKRLQELE---ASRDSKVKDAKAIR-LAEMNRKNRVENFKN-------ASELKRV 487
E ++ +L LE AS+ + ++++ ++++N +NR N KN +S+L++V
Sbjct: 397 KAESLQAKLTALENTLASQTNTSNTSESLNTMSKVNERNRRLNQKNIRKAEIKSSQLRKV 456
Query: 488 NTSLKAGEAGYDPFSRRWTRSRNYY 512
++ G DPFSR T +R +Y
Sbjct: 457 ---VENNPDGGDPFSRFKTATRVFY 478
>gi|256272508|gb|EEU07488.1| Rtf1p [Saccharomyces cerevisiae JAY291]
Length = 558
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 127/490 (25%), Positives = 205/490 (41%), Gaps = 89/490 (18%)
Query: 76 DQGSQEEGDYDGGASEHEGDSSNESDDDNHGQMTELEREMMIFERDDKKVDKNLRDKFRS 135
D GS+EE + EG +ESD ++ + E+ERE ++FER R FR
Sbjct: 68 DYGSEEEEE--ANPFPLEGKYKDESDREHLESLPEMERETLLFERSQIMQKYQERKLFRE 125
Query: 136 R---REERSTRSTKETPPLPSSRSARLAARSADRAAAKDDALNELRAKRLKQQDPEAHRR 192
R +E+ R+ + SR R + RS D ++A +L Q + R+
Sbjct: 126 RGRDMKEQQQRAKND----EDSRKTRASTRSTHATGHSD-----IKASKLSQLKKQRARK 176
Query: 193 LRDASRGGSGSRVLSPVKRKAFTPAGLSSSSQSESESRSHSDDEGS-TGDGGMADSDDDG 251
R S + + + DDEGS GD D++
Sbjct: 177 NRHYS-------------------DNEDEDDEEDYREEDYKDDEGSEYGD------DEEY 211
Query: 252 APGSGRPTYD---------------------DIKEITIRRSKLAKWFMEPFFEELIVGCF 290
P R TYD D ++ I RS +AK+ P FE+ + GC+
Sbjct: 212 NPFDRRDTYDKREEVEWAEEEDEQDREPEISDFNKLRIGRSFVAKFCFYPGFEDAVKGCY 271
Query: 291 VRVGIGRSKNG--PIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMA 348
RV +G K YR+ + V +P Y + T +Y VT G + +QM
Sbjct: 272 GRVNVGTDKRTGKTSYRMVRIERVFLQKP---YNMGKFYTNQYFGVTQGKDRKV--FQMN 326
Query: 349 MVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEK-KESIQKINTFVYSAAT---VKQML 404
SD E+E++++LR ++ + PS + K KE + +NT + T V+ +
Sbjct: 327 YFSDGLFAEDEYQRYLRALDNSQMIKPSLHSLSNKTKEVMDFVNTPLTDKTTDEVVRHRM 386
Query: 405 QEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMER-------IKKRLQELEASRDSK 457
Q K S N EK LR +L+ A+ ++E D+ + +KR+ E ++
Sbjct: 387 QFNKKLSG--TNAVLEKTVLREKLQYAKETNNEKDIAKYSAQLRNFEKRMSVYEKHHEND 444
Query: 458 VKDAKAI-RLAEMNRKNRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKP 516
D K + L NRK + N +NA +K+ +++ ++ DPFSR TR++ YY
Sbjct: 445 QSDIKKLGELTSKNRKLNMSNIRNAEHVKKEDSN--NFDSKSDPFSRLKTRTKVYY---- 498
Query: 517 GEEVTAEANG 526
+E+ E N
Sbjct: 499 -QEIQKEENA 507
>gi|151943575|gb|EDN61885.1| restores tbp function [Saccharomyces cerevisiae YJM789]
Length = 558
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 127/490 (25%), Positives = 206/490 (42%), Gaps = 89/490 (18%)
Query: 76 DQGSQEEGDYDGGASEHEGDSSNESDDDNHGQMTELEREMMIFERDDKKVDKNLRDKFRS 135
D GS+EE + EG +ESD ++ + E+ERE ++FER R FR+
Sbjct: 68 DYGSEEEEE--ANPFPLEGKYKDESDREHLESLPEMERETLLFERSQIMQKYQERKLFRA 125
Query: 136 R---REERSTRSTKETPPLPSSRSARLAARSADRAAAKDDALNELRAKRLKQQDPEAHRR 192
R +E+ R+ + SR R + RS D ++A +L Q + R+
Sbjct: 126 RGRDMKEQQQRAKND----EDSRKTRASTRSTHATGHSD-----IKASKLSQLKKQRARK 176
Query: 193 LRDASRGGSGSRVLSPVKRKAFTPAGLSSSSQSESESRSHSDDEGS-TGDGGMADSDDDG 251
R S + + + DDEGS GD D++
Sbjct: 177 NRHYS-------------------DNEDEDDEEDYREEDYKDDEGSEYGD------DEEY 211
Query: 252 APGSGRPTYD---------------------DIKEITIRRSKLAKWFMEPFFEELIVGCF 290
P R TYD D ++ I RS +AK+ P FE+ + GC+
Sbjct: 212 NPFDRRDTYDKREEVEWAEEEDEQDREPEISDFNKLRIGRSFVAKFCFYPGFEDAVKGCY 271
Query: 291 VRVGIGRSKNG--PIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMA 348
RV +G K YR+ + V +P Y + T +Y VT G + +QM
Sbjct: 272 GRVNVGTDKRTGKTSYRMVRIERVFLQKP---YNMGKFYTNQYFGVTQGKDRKV--FQMN 326
Query: 349 MVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEK-KESIQKINTFVYSAAT---VKQML 404
SD E+E++++LR ++ + PS + K KE + +NT + T V+ +
Sbjct: 327 YFSDGLFAEDEYQRYLRALDNSQMIKPSLYSLSNKTKEVMDFVNTPLTDKTTDEVVRHRM 386
Query: 405 QEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMER-------IKKRLQELEASRDSK 457
Q K S N EK LR +L+ A+ ++E D+ + +KR+ E ++
Sbjct: 387 QFNKKLSG--TNAVLEKTVLREKLQYAKETNNEKDIAKYSAQLRNFEKRMSVYEKHHEND 444
Query: 458 VKDAKAI-RLAEMNRKNRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKP 516
D K + L NRK + N +NA +K+ +++ ++ DPFSR TR++ YY
Sbjct: 445 QSDIKKLGELTSKNRKLNMSNIRNAEHVKKEDSN--NFDSKSDPFSRLKTRTKVYY---- 498
Query: 517 GEEVTAEANG 526
+E+ E N
Sbjct: 499 -QEIQKEENA 507
>gi|72010089|ref|XP_786848.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog
[Strongylocentrotus purpuratus]
Length = 690
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 126/251 (50%), Gaps = 7/251 (2%)
Query: 259 TYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPD 318
T +++ I + R+K+ KW PFF +GCFVR+GIG++ P+YR+ + +D E
Sbjct: 326 TKEELNRIRLSRNKIEKWVHMPFFPRTTIGCFVRIGIGQNNGRPVYRVAEI--IDVVETA 383
Query: 319 RSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQ 378
+ Y L T K L + + ++ R + VS+ E EFK+W ++ +P+
Sbjct: 384 KIYPLGATRTNKGLKLKYASQERVFR--LEFVSNQDFSETEFKRWHEDMINGDYDLPTIN 441
Query: 379 DVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEV 438
DV K+ I++ + Y +++++ EK+ P N A K +LR+ ++A +E
Sbjct: 442 DVEHKEAIIKRALDYKYKEEDIEKIVHEKERFRKNPRNYAMTKTKLRKSRDLALMEGNEE 501
Query: 439 DMERIKKRLQELE--ASRDSKVKDAKAIRLAEMNRKNRVENFKNASELKRVNTSLKAGEA 496
+ + ++L +LE A ++++ + + +N++NR N SE+ + A
Sbjct: 502 TAKGLSQKLTDLEERAQELDRIRNREVNAITYINQRNRNRNIAE-SEVAMKEEIKEIENA 560
Query: 497 GYDPFSRRWTR 507
DPF+RR R
Sbjct: 561 PPDPFTRRHCR 571
>gi|170587230|ref|XP_001898381.1| Plus-3 domain containing protein [Brugia malayi]
gi|158594207|gb|EDP32793.1| Plus-3 domain containing protein [Brugia malayi]
Length = 506
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 88/164 (53%), Gaps = 5/164 (3%)
Query: 262 DIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNG-PIYRLCMVRNVDATEPDRS 320
D+ I + R K+++ PFF + ++GCFVR+GIGR+K G +YR + +D E +
Sbjct: 336 DLARIRLSRFKISRIVHAPFFNKTVIGCFVRIGIGRNKEGRSVYRAAQI--LDVVETAKV 393
Query: 321 YKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDV 380
Y+LEN T K L + G E +++ VS+S EF +W ++ N+ + + V
Sbjct: 394 YQLENTRTNKGLKLKHGEEERV--YRLEFVSNSEFTNHEFNKWYDAMKSNNLSILTIDQV 451
Query: 381 LEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRL 424
+K+ IQK + Y+ ++ M+QEK PLN A EK L
Sbjct: 452 EKKEADIQKAVNYNYTDKDIELMVQEKMRFQKAPLNYALEKGNL 495
>gi|312074618|ref|XP_003140051.1| hypothetical protein LOAG_04465 [Loa loa]
Length = 437
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 88/164 (53%), Gaps = 5/164 (3%)
Query: 262 DIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNG-PIYRLCMVRNVDATEPDRS 320
D+ I + R K++K PFF + ++GCFVR+GIGR+K G +YR + +D E +
Sbjct: 269 DLSRIRLSRFKISKIVHAPFFNKTVIGCFVRIGIGRNKEGRSVYRAAQI--LDVVETAKV 326
Query: 321 YKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDV 380
Y+LEN T K L + G E +++ VS+S EF +W ++ N+ + + V
Sbjct: 327 YQLENTRTNKGLKLKHGEEERV--YRLEFVSNSEFTSHEFNKWYDAMKSNNLAILTIDQV 384
Query: 381 LEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRL 424
+K+ IQK + Y+ ++ M+QEK PLN A EK L
Sbjct: 385 EKKEADIQKAVNYNYTDKDIELMVQEKMRFQKAPLNYALEKGNL 428
>gi|391339869|ref|XP_003744269.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform 1
[Metaseiulus occidentalis]
Length = 596
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 126/253 (49%), Gaps = 17/253 (6%)
Query: 259 TYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPD 318
T D + +I + R +L KW PFF + +VGCFV++G+G+ YR+ + ++ E
Sbjct: 231 TRDQLSQIRLSRFRLEKWLFMPFFAKTVVGCFVKIGVGQMGGAQNYRIAEI--LEVVETP 288
Query: 319 RSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQ 378
+ Y+ T + L + G E R + VS+ E EF++W+ + ++ +P+
Sbjct: 289 KVYQCGKNRTNRGLKLKHGKEERIYR--IEYVSNQEFTENEFQKWMAAMGVDNIGLPTVS 346
Query: 379 DVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDE- 437
+ +KK+ ++ N SA ++QM+ EKK P N A K + ++ E+A+ + D+
Sbjct: 347 FIEKKKKDLEAANNHSCSANDIQQMVDEKKKFKKNPHNYAMAKTEVMKKKEMAEQQGDQE 406
Query: 438 ------VDMERIKKRLQELEASRDSKVKDAKAIRLAEMNRKNRVENFKNASELKRVNTSL 491
+++R++ R +EL+ R S + I E NR+ + + + A + L
Sbjct: 407 EARKWSEELDRLEDRAKELDKQRTSTISAIAYIN--ERNRQKNIVDIERAILEEAKKNKL 464
Query: 492 KAGEAGYDPFSRR 504
KA DPF+RR
Sbjct: 465 KAD----DPFTRR 473
>gi|391339871|ref|XP_003744270.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform 2
[Metaseiulus occidentalis]
Length = 653
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 126/253 (49%), Gaps = 17/253 (6%)
Query: 259 TYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPD 318
T D + +I + R +L KW PFF + +VGCFV++G+G+ YR+ + ++ E
Sbjct: 288 TRDQLSQIRLSRFRLEKWLFMPFFAKTVVGCFVKIGVGQMGGAQNYRIAEI--LEVVETP 345
Query: 319 RSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQ 378
+ Y+ T + L + G E R + VS+ E EF++W+ + ++ +P+
Sbjct: 346 KVYQCGKNRTNRGLKLKHGKEERIYR--IEYVSNQEFTENEFQKWMAAMGVDNIGLPTVS 403
Query: 379 DVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDE- 437
+ +KK+ ++ N SA ++QM+ EKK P N A K + ++ E+A+ + D+
Sbjct: 404 FIEKKKKDLEAANNHSCSANDIQQMVDEKKKFKKNPHNYAMAKTEVMKKKEMAEQQGDQE 463
Query: 438 ------VDMERIKKRLQELEASRDSKVKDAKAIRLAEMNRKNRVENFKNASELKRVNTSL 491
+++R++ R +EL+ R S + I E NR+ + + + A + L
Sbjct: 464 EARKWSEELDRLEDRAKELDKQRTSTISAIAYIN--ERNRQKNIVDIERAILEEAKKNKL 521
Query: 492 KAGEAGYDPFSRR 504
KA DPF+RR
Sbjct: 522 KAD----DPFTRR 530
>gi|193657299|ref|XP_001943293.1| PREDICTED: hypothetical protein LOC100162144 [Acyrthosiphon pisum]
Length = 636
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 159/336 (47%), Gaps = 37/336 (11%)
Query: 261 DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRS 320
D++ +I + R K+ K+ P FE+ ++GCFVR+GIG P+YR+ + NV E +
Sbjct: 326 DELNKIRLSRFKMEKFVHLPTFEKTVIGCFVRIGIGNYNGVPVYRVAEICNV--CETAKV 383
Query: 321 YKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDV 380
Y+L + T K L + G R + +S+ E EF +W N +P+ ++
Sbjct: 384 YQLGSTRTNKGLRLKHGTNEKVFRLE--FISNQEFTESEFVKWKELCHMNRIPLPTLAEL 441
Query: 381 LEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDM 440
K I+ + + V+Q+++EK+ + P N A +K L ++ + AQ+ ++
Sbjct: 442 EIKVRDIKAALAYQFKEEDVEQIVREKERFKTNPHNYAMKKTSLMKDRDDAQALGKVEEV 501
Query: 441 ERIKKRLQELE--ASRDSKVKDAKAIRLAEMNRKNRVENFKNASELKRVNTSLKA--GEA 496
+I+++L +LE A+ K++ + ++ +N +NR N + A K + LKA G+
Sbjct: 502 LKIEQQLSDLEERANHLDKMRTSTISSISYINDRNRKRNVEEAE--KAILEELKANKGKK 559
Query: 497 GYDPFSRRWTRSRNYYISKPGE----EVTAEANGDKNGVPGGANGEEGATGEVGMAATEA 552
DPF+RR T+ + +KP + +E KN + +G++ + + +
Sbjct: 560 IDDPFTRRSTKPCMKFRAKPNSAIDGSIASEVEESKNIIETNDIKNDGSSSKSNLMKAD- 618
Query: 553 ALEAAAGAGKLVDTNAPLDLGTESNMLHDFELDISL 588
DL +HDF++D+++
Sbjct: 619 ------------------DLYA----VHDFDIDLNI 632
>gi|339257198|ref|XP_003369969.1| plus-3 domain protein [Trichinella spiralis]
gi|316965488|gb|EFV50194.1| plus-3 domain protein [Trichinella spiralis]
Length = 660
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 133/263 (50%), Gaps = 26/263 (9%)
Query: 268 IRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRSYKLENRT 327
+ + +L++ PFF+ +VGC+VR+ IG + P+YR+ + +D E + Y+ EN
Sbjct: 278 LSKIRLSRLVHTPFFKNTVVGCYVRISIGANNGVPVYRVAEI--IDVVETAKVYEFENTR 335
Query: 328 TCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKESI 387
T K L + G +++ +S+S + EF +W+ + + P+ + V K +
Sbjct: 336 TNKGLRLRHGKAERV--YRLEFLSNSDFTDTEFAKWVDTMTSQNMEFPTLEHVKNKVADV 393
Query: 388 QKINTFVYSAATVKQ---------MLQEKKSASSRPLNVAAEKDRLRREL--------EV 430
Y+ V Q M++EKK P N A +K +L + L EV
Sbjct: 394 IAAFNHQYTEEDVDQVSPLRKMCYMVKEKKRFRIAPTNYAMQKAQLVKSLFKYFSLKQEV 453
Query: 431 AQSRHDEVDMERIKKRLQELE-ASRDSKVKDAKAIR-LAEMNRKNRVENFKNASELKRVN 488
A+ D ++ERIK+ +++L+ A+ + + +A++ +A++N++NR+ N + R +
Sbjct: 454 AEQNDDTFEVERIKQLIEQLDNAAAAREQRRLQAVKGIADINKRNRLWNMNETEKAIRES 513
Query: 489 TSLKAGEAGYDPFSRRWTRSRNY 511
+S + DPF+RR TRS+ Y
Sbjct: 514 SSEVQAD---DPFTRRNTRSKIY 533
>gi|242008323|ref|XP_002424956.1| RNA polymerase-associated protein RTF1, putative [Pediculus humanus
corporis]
gi|212508570|gb|EEB12218.1| RNA polymerase-associated protein RTF1, putative [Pediculus humanus
corporis]
Length = 674
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 135/259 (52%), Gaps = 14/259 (5%)
Query: 261 DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNG---PIYRLCMVRNVDATEP 317
+D+ +I + R K+ K+ PFF ++ GCFVR+GIG + NG P+YR+ V V E
Sbjct: 322 EDLNKIRLSRHKMEKFVHLPFFSRVVTGCFVRIGIGNN-NGSGKPVYRVAEVSGV--CET 378
Query: 318 DRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSK 377
+ Y+L + T L + G + R + VS+ E EF +W +P+
Sbjct: 379 GKVYQLGSTRTNVGLRLRHGAQERVFRLEF--VSNQEFTESEFMKWKETCALQGISLPTF 436
Query: 378 QDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDE 437
D+ +K + I++ + + +++M++EK+ S P N A +K L +E ++A + DE
Sbjct: 437 DDLEKKLKDIKEALIYEFKEEDIEKMVKEKERFKSSPYNYAMKKTFLLKEKDMAAANGDE 496
Query: 438 VDMERIKKRLQELEASRDS--KVKDAKAIRLAEMNRKNRVENFKNASELKRVNTSLKA-- 493
+ IK+++ ELE + K++ + ++ +N +NR +N + A K + LKA
Sbjct: 497 EKVAEIKQKIAELEERAEELDKMRTSTISSISYINDRNRKKNVEQAE--KAIMEELKANK 554
Query: 494 GEAGYDPFSRRWTRSRNYY 512
G+ DPF+RR T+ R +
Sbjct: 555 GKKVDDPFTRRSTKPRMVF 573
>gi|19112299|ref|NP_595507.1| RNA polymerase II associated Paf1 complex (predicted)
[Schizosaccharomyces pombe 972h-]
gi|74582963|sp|O94667.1|RTF1_SCHPO RecName: Full=RNA polymerase-associated protein C651.09c; AltName:
Full=Protein RTF1 homolog
gi|4467281|emb|CAB37605.1| RNA polymerase II associated Paf1 complex (predicted)
[Schizosaccharomyces pombe]
Length = 560
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 129/497 (25%), Positives = 209/497 (42%), Gaps = 85/497 (17%)
Query: 1 MADLENLLLEAAGRTNSAGRNRHSASSSKRRREGSYSGSDSRDDDSDDNRGYGSRKPSGS 60
MAD ++ LL AG +S +S+++R S D D+N G
Sbjct: 1 MADFQDELLALAGIDDS------DVASNRKRAHDDLDDVLSSSSDEDNNENVGQ------ 48
Query: 61 QVPLKKRLDPAERDDDQGSQE-EGDYD---GGASEHEGDSSNESDDDNHGQMTELEREMM 116
D AE +G+++ E +++ EG +E+D MTE+ERE +
Sbjct: 49 --------DYAEESGGEGNEKSEDEFEEKFKNPYRLEGKFKDEADRAKIMAMTEIERESI 100
Query: 117 IFERDDKKVDKNLRDKFRSRRE-------------ERSTRSTKETPPLPSSRSARLAARS 163
+FER+++ K RRE +STR + PL S+
Sbjct: 101 LFEREEEI------SKLMERRELAIRLHQQNAQYMAQSTRRSTRDKPLTSA--------- 145
Query: 164 ADRAAAKDDALNELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSPVK-RKAFTPAGLSSS 222
AA K D L EL+ +R + R A +R SPV + + S
Sbjct: 146 ---AAGKRDKLTELKKRRQE----------RSARSVSERTRKRSPVSDYEEQNESEKSEE 192
Query: 223 SQSESESRSHSDDEGSTGDGGMADSDDDGAPGSGRPTYDDIKEITIRRSKLAKWFMEPFF 282
+ S S + E + D A+ YD + I + R +A++ P F
Sbjct: 193 EEGYSPSYAEEKVEQVSKDNASAN------------LYD-LNAIRLGRKHVAEYMYHPIF 239
Query: 283 EELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSA 342
E + GCFVRV IG +YRLC V+ + E + Y+++ T L G S
Sbjct: 240 ESTVTGCFVRVKIGERDGQGVYRLCQVKGI--LESRKPYRVDGVLTKVSLECFHGR--SK 295
Query: 343 ARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKESIQKINTFVYSAATVKQ 402
+ + ++S+ P + +F++W ++ + MPSK V K ++ ++ +V S V
Sbjct: 296 RVFDVNVLSNEPFSDHDFQRWHHQMMEDKLSMPSKNFVQRKLNDLRDMSKYVLSEKEVSD 355
Query: 403 MLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKRLQEL-EASRDSKVKDA 461
++ KK S P N+AAEK RLR+ + A + ++ I +L L E S S
Sbjct: 356 IINRKKELSRVPSNIAAEKTRLRQRRQAAYVAGNAELVKEIDDQLNTLEELSMGSNQNSN 415
Query: 462 KAI-RLAEMNRKNRVEN 477
A+ +LA++N +NR N
Sbjct: 416 SAMDQLAKVNERNRRRN 432
>gi|50549663|ref|XP_502302.1| YALI0D01892p [Yarrowia lipolytica]
gi|49648170|emb|CAG80488.1| YALI0D01892p [Yarrowia lipolytica CLIB122]
Length = 514
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 138/262 (52%), Gaps = 12/262 (4%)
Query: 266 ITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRSYKLEN 325
+ RS+LAK+ P FE+++VG ++R+ I S+ R+C+V+ V + ++Y LE
Sbjct: 216 VRFSRSQLAKFCFYPEFEQVVVGSYIRIPIAVSRTEQRNRVCLVKEVVPLK-HKTYSLEG 274
Query: 326 RTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKE 385
T L V +G + A ++M SDSP EE+F +W + E +PS Q + K +
Sbjct: 275 TTVNFSLKVAFG--ADEANFEMRYCSDSPFTEEDFVKWKKACEEGGVSLPSVQRLERKHK 332
Query: 386 SIQKINTFVYSAATVKQMLQEK-KSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIK 444
++++ T ++ + M++ + K ++ R N E+ L ++A+ + +E +M +I
Sbjct: 333 ELKELATRPLTSQEIDDMVRRRSKLSAGRGANAVIERAVLENRRQIAEDQGNEDEMAKID 392
Query: 445 KRLQELEASRDSKVKDAKAIRLAEMNRKNRVENFKNA--SELKRVNTSLKAGEA----GY 498
++L ELEA SK ++ + AE+N +NR N ++ +EL + KA +
Sbjct: 393 EQLAELEALNTSKPISSQKDKFAEVNARNRKANQESIRKAELMDLEARRKAAMSNSGVNA 452
Query: 499 DPFSRRWTRSRNYYISKPGEEV 520
DPFSR T + ++ S EE+
Sbjct: 453 DPFSRLKTTVKIFHQS--AEEI 472
>gi|219125179|ref|XP_002182864.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405658|gb|EEC45600.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 1031
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 116/225 (51%), Gaps = 15/225 (6%)
Query: 206 LSPVKRKAFTPAGLSSSSQSESESRSHSDDEGSTGDGGMADSDDDGAPGSG-RPTYDDIK 264
P ++KA TP S + E + S+D+ D + + D + GS T +D K
Sbjct: 579 FMPWQKKAKTPKSTVSRLDKDDE-KMDSEDDRDGADVSRSKTTSDRSGGSAVEATLEDFK 637
Query: 265 EITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNG-PIYRLCMVRNVDATEPDRSYKL 323
++T+ R +LA+W EPFFE I+ CFVRV IG +NG +YRLC + +V + +
Sbjct: 638 KVTVPRRRLARWCNEPFFEAAILNCFVRVLIGEDENGDKVYRLCEITDVKTGMKVYKFPI 697
Query: 324 ENR-----TTCKYLNVTWG-NESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSK 377
+ T K L + +G NE + M++VSD+PP E + K+++ V RN+ + P
Sbjct: 698 AKKGDKPIMTTKTLTLKFGKNEKE---FPMSLVSDAPPDEVDMKKYV-TVMRNNRQEPLT 753
Query: 378 QDVLEKKESIQK--INTFVYSAATVKQMLQEKKSASSRPLNVAAE 420
+ K +Q ++ +VY+ +++ LQ++K + N AE
Sbjct: 754 KRQGNKLHRLQHDLVHNYVYTTEDIERNLQQRKKQGKKLGNFGAE 798
>gi|125810847|ref|XP_001361651.1| GA10665 [Drosophila pseudoobscura pseudoobscura]
gi|54636827|gb|EAL26230.1| GA10665 [Drosophila pseudoobscura pseudoobscura]
Length = 764
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 98/406 (24%), Positives = 172/406 (42%), Gaps = 58/406 (14%)
Query: 248 DDDGAPGSGRPTY----DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPI 303
DDD S P + +D+ ++ + R K+ ++ P FE ++ CFVR+ IG + P+
Sbjct: 407 DDDKTTKS--PVFISNREDLNKLRLSRHKMERFVNLPIFESTVLNCFVRISIGNNGQKPV 464
Query: 304 YRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQW 363
YR+ + V E + Y L T + L + G + R + +S+ E EFK+W
Sbjct: 465 YRVAEITGV--VETGKIYSLGTTRTNRGLRLKHGTQERVFR--LEFISNQEFTENEFKKW 520
Query: 364 LREVERNSGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDR 423
+ +MPS + + K I+K + + V ++++EK +RP N A +K
Sbjct: 521 HEVCQHAHVQMPSIELIEIKANDIKKALNYEFKDEDVDKIVEEKNRFRNRPTNYAMKKTC 580
Query: 424 LRRELEVAQSRHDEVDMERIKKRLQELE--ASRDSKVKDAKAIRLAEMNRKNRVENFKNA 481
L +E + A R D + + +++ ELE AS K + ++ +N +NR +N ++A
Sbjct: 581 LMKERDAAMLRGDYDIAQDLSQQIDELENRASELDKRRSHTLNLISYINDRNRKKNVQDA 640
Query: 482 SELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANGEEGA 541
+ G+ DPF+RR T+ R + EE + PG E
Sbjct: 641 EKAIMEEARANKGQKISDPFTRRITQPRMGFKGAKKEEEDPQLAPLPPPPPGKKRPNE-- 698
Query: 542 TGEVGMAATEAALEAAAGAGKLVDTNAPLDLGTESNMLHDFELDI----SLNALKKFGGP 597
AG+ T+A D S LHDF++D+ +N+ P
Sbjct: 699 ----------------AGSSNAKPTDAK-DFSLYS--LHDFDIDLDVPLPVNSTNSVPKP 739
Query: 598 QGVLAGFMARKQRIEATVGCQVPENDGRRHALTLTVGDYKRRRGLL 643
A ++++ +L + DYK++RGL+
Sbjct: 740 ANKPAETVSKR---------------------SLNLEDYKKKRGLI 764
>gi|357604856|gb|EHJ64361.1| hypothetical protein KGM_10227 [Danaus plexippus]
Length = 612
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 101/436 (23%), Positives = 178/436 (40%), Gaps = 85/436 (19%)
Query: 259 TYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPD 318
T + I ++ + R KL + PFF ++ GCFVR+GIG + P+YR+ + +D E
Sbjct: 211 TREQINKLRLSRFKLERLVHLPFFSRVVSGCFVRIGIGNNNGNPVYRVAEI--IDVYETA 268
Query: 319 RSYKLENRTTCKYLNVTWGN----------------ESSAARWQMAM--VSDSPPL---- 356
+ Y L N T K + G E+ +W A+ + PP
Sbjct: 269 KVYNLGNTRTNKGFKLRHGTQDRVFRLEFVSNQEFTENEFQKWHRAIKEANKKPPTMDFV 328
Query: 357 -------------------EEEFKQWLREVERNSGRMPSKQDVLEKKESIQKINTFVYSA 397
E EF++W R ++ + + P+ V K ++ + +
Sbjct: 329 RNKILEVKDALMYEFKEFTENEFQKWHRAIKEANKKPPTMDFVRNKILEVKDALMYEFKE 388
Query: 398 ATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKRLQELE--ASRD 455
+++++ EK+ S P N A +K +L +E +VAQ R DE + + +LQELE AS
Sbjct: 389 EDIEKIVAEKERFRSHPTNYAMKKTQLMKERDVAQLRGDEELVLELNSKLQELEERASAL 448
Query: 456 SKVKDAKAIRLAEMNRKNRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISK 515
K + + ++ +N +NR N + A + G+ DPF+RR T+ + S
Sbjct: 449 DKTRTSSIQSISYINNRNRKLNVETAEKAIMEEVKAMKGKKMDDPFTRRHTKPVMNFKSH 508
Query: 516 PGEEVTAEANGDKNGVPGGANGEEGATGEVGMAATEAALE------AAAGAGKLVDTNAP 569
GG+ +E E A + + L AP
Sbjct: 509 -----------------GGSRSQELLKNEQQAAEQQKQKDEEERIEKEKEEEILNRPVAP 551
Query: 570 LDLGTESNM--LHDFELDISLNALKKFGGPQGVLAGFMARKQRIEATVGCQVPENDGRRH 627
L + ++ LHDF+++I ++ P+ V + + +V + +R
Sbjct: 552 RPLPPDGSLYSLHDFDINIEID----LPAPKPVTSH--------SKQITIKVKDAGPKR- 598
Query: 628 ALTLTVGDYKRRRGLL 643
+L + DYK+R GL+
Sbjct: 599 --SLNLDDYKKRHGLI 612
>gi|443695735|gb|ELT96585.1| hypothetical protein CAPTEDRAFT_18025 [Capitella teleta]
Length = 694
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 99/391 (25%), Positives = 178/391 (45%), Gaps = 45/391 (11%)
Query: 261 DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRS 320
+ + ++ I R K+ +W PFF+ L+VGC+VR+GIG +YR+ + + E +
Sbjct: 341 EQLAKLRISRHKMERWCHMPFFDRLVVGCYVRIGIGNHNGRSVYRVAEI--IGVVETAKI 398
Query: 321 YKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDV 380
Y+L T K L + S +++ VS+ E EF +W + + + ++
Sbjct: 399 YQLGTTRTNKGLRLRHAG--SERVYRLEFVSNHDFTETEFLKWRETMMIGGFTLVTVAEI 456
Query: 381 LEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDM 440
K + ++ T+ Y + ++++ K P N A +K L ++ E+A+ D +
Sbjct: 457 EAKVKEVKDAMTYKYKEEDIDRIVESKNRFKKNPHNYAMKKTDLLKQKEMAEISGDTEKL 516
Query: 441 ERIKKRLQELE--ASRDSKVKDAKAIRLAEMNRKNRVENFKNASELKRVNTSLKAGEAGY 498
+ + + L+ELE A+ K + + ++ +N++NR N A E R + + A
Sbjct: 517 QEVTQILEELEERATELDKRRTSNISSVSYINQRNRQRNTVEAEEAMRQEMAEQRS-AKA 575
Query: 499 DPFSRRWTRSRNYYISKPGE-EVTAEAN---GDKNGVPGGANGEEGATGEVGMAATEAA- 553
DPF+R ++ R ++K + E+ A+ DK + GA E A + A
Sbjct: 576 DPFTR--SQCRPTIVTKSLDPEIDAQIRQRYQDKYKMEAGA-------MEFNKEARQKAA 626
Query: 554 -LEAAAGAGKLVDTNAPLDLGTESNMLHDFELDISLNALKKFGGPQGVLAGFMARKQRIE 612
LE A AGK N D +HDFE+ I L P A ++ + ++
Sbjct: 627 DLEVAKTAGKPALDNDLFD-------VHDFEVKIDLEV------PS---ASNVSAAKPLD 670
Query: 613 ATVGCQVPENDGRRHALTLTVGDYKRRRGLL 643
+G P RR +L + DYK+R+GL+
Sbjct: 671 RLLGSSGP----RR---SLNLADYKKRKGLI 694
>gi|156840653|ref|XP_001643706.1| hypothetical protein Kpol_507p10 [Vanderwaltozyma polyspora DSM
70294]
gi|156114328|gb|EDO15848.1| hypothetical protein Kpol_507p10 [Vanderwaltozyma polyspora DSM
70294]
Length = 461
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 132/280 (47%), Gaps = 31/280 (11%)
Query: 261 DDIKEITIRRSKLAKWFMEPFFEELIVGCF--VRVGIGRSKNGPIYRLCMVRNVDATEPD 318
DD +I I RS +A++ P F E++ GC+ V VG+ R N YR+ + V +P
Sbjct: 148 DDFNKIKIGRSFVARYCFHPDFNEIVKGCYGRVNVGVDRRTNQTAYRMVKIEKVFLQKP- 206
Query: 319 RSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQ 378
Y + T +Y VT G + +QM SD P EEF ++ R ++ ++ PS
Sbjct: 207 --YNMGKFFTNQYFGVTQGKDRKV--FQMNFFSDGPITIEEFDRYQRSLDASNASKPSVY 262
Query: 379 DVLEKKESIQKINTFVYSAATVK--------QMLQEKKSASSRPLNVAAEKDRLRRELEV 430
+ +K +++IN FV T K +M+ KK + + N EK LR +L+
Sbjct: 263 SLTQK---LKEINEFVSEPMTDKLTDEIVRNRMVFNKKLSGT---NAVLEKTVLRGKLQY 316
Query: 431 AQSRHDEVDMERIKKRLQELEASRDSKVK-----DAKAIRLAEMNRKNRVENFKNASELK 485
A+ ++E D+ + +L+ LE + K A A +L + KNR N A ++
Sbjct: 317 AKENNNERDIAKYSTQLRNLEKRLSTYEKHHENDQAGARKLGALTSKNRKVNMDKAKNVE 376
Query: 486 RVNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEAN 525
V ++ DPFSR TR++ YY +EV E N
Sbjct: 377 HVKEEDINFDSKADPFSRLKTRTKIYY-----QEVQKEEN 411
>gi|194882181|ref|XP_001975191.1| GG22183 [Drosophila erecta]
gi|190658378|gb|EDV55591.1| GG22183 [Drosophila erecta]
Length = 776
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 147/325 (45%), Gaps = 15/325 (4%)
Query: 259 TYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPD 318
T +D+ ++ + R K+ ++ P FE ++ CFVR+ IG + P+YR+ + V E
Sbjct: 431 TREDLNKLRLSRYKMERFVNLPIFESTVLNCFVRISIGNNGQKPVYRVAEI--VGVVETG 488
Query: 319 RSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQ 378
+ Y L T + L + G + R + +S+ E EF +W +++ +MPS
Sbjct: 489 KIYSLGTTRTNRGLRLKHGTQERVFR--LEFISNQEFTENEFNKWNEVCQQSHVQMPSID 546
Query: 379 DVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEV 438
+ K+ I+K + + V ++++EK +RP N A +K L +E + A R D
Sbjct: 547 LIAIKQNDIKKALNYEFKDEDVDKIVEEKNRFRNRPTNYAMKKTCLMKERDAAMLRGDYD 606
Query: 439 DMERIKKRLQELE--ASRDSKVKDAKAIRLAEMNRKNRVENFKNAS----ELKRVNTSLK 492
+ + +++ ELE AS K + ++ +N +NR +N ++A E R N LK
Sbjct: 607 IAQDLGQQIDELENRASELDKRRSHTLNLISYINDRNRKKNVEDAEKAILEEARANKGLK 666
Query: 493 AGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANGEEGATGEVGMAATEA 552
DPF+RR T+ R + +E + PG E T + T++
Sbjct: 667 IS----DPFTRRITQPRMGFKGAKKDEDDVQLAPLPPPPPGKKRPNEAGTSSASVKPTDS 722
Query: 553 ALEAAAGAGKL-VDTNAPLDLGTES 576
+ +D + PL + T S
Sbjct: 723 KDYSLYSLHDFDIDLDVPLPVNTNS 747
>gi|366998743|ref|XP_003684108.1| hypothetical protein TPHA_0A06000 [Tetrapisispora phaffii CBS 4417]
gi|357522403|emb|CCE61674.1| hypothetical protein TPHA_0A06000 [Tetrapisispora phaffii CBS 4417]
Length = 549
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 109/457 (23%), Positives = 204/457 (44%), Gaps = 60/457 (13%)
Query: 93 EGDSSNESDDDNHGQMTELEREMMIFERDDKKVDKNLRDKFRSRREERSTRSTKETPPLP 152
EG +E D D + E+ERE ++FER ++ + +D+ R +R+ + +E+
Sbjct: 79 EGKYRDERDRDYLESLPEMERETLLFERS--QLMQKYKDRMLFRERQRTLKRQRESSENR 136
Query: 153 SSRSARLAARSADRAAAKDDALNELRAKRLKQQDPEAHRRLRDASRGGSGSRVL------ 206
RS+ +++ + K L++L+ +R ++ + + +
Sbjct: 137 KVRSSTRSSKVTGHSDVKSSKLSQLKKQRERKNNHHYSDEDDEDEYEEEENIYEDKYEEG 196
Query: 207 SPVKRKAFTPAGLSSSSQSESESRSHSDDEGSTGDGGMADSDDDGAPGSGRPTYDDIKEI 266
S + +++ P S+ ESE D AD D + +D +I
Sbjct: 197 SEYEDESYDPYKRKSTYAEESEEE----------DVKWADDTDRES------NVNDFNKI 240
Query: 267 TIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNG--PIYRLCMVRNVDATEPDRSYKLE 324
I RS +AK+ P F +++ C+ RV +G +KN +YR+ + V +P Y +
Sbjct: 241 KIGRSFVAKYCFYPGFNDIVKDCYGRVNVGVNKNTNQVMYRMVKIEKVFLQKP---YSMG 297
Query: 325 NRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKK 384
N T +Y VT G + +QM SD ++E+++++R +E ++ +PS + K
Sbjct: 298 NFFTNQYFGVTQGKDRKV--FQMKFFSDGAITQDEYERYVRALESSNLTIPSTYALSNK- 354
Query: 385 ESIQKINTFVYSAATVK--------QMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHD 436
++++ FV TVK +M+ KK + + N EK LR +L A+ +
Sbjct: 355 --FKEVDEFVNEPMTVKLTDEVVRNRMIFNKKLSGT---NAVLEKTVLREKLNFAKQNNS 409
Query: 437 EVDMER-------IKKRLQELEASRDSKVKDAKAI-RLAEMNRKNRVENFKNASELKRVN 488
E D+ + ++KRL E ++ + AK + +L NRK ++ K +K
Sbjct: 410 ERDIAKYSSQLRNLEKRLMTYEKHHENDQQGAKKLGKLTSKNRKLNMDKIKYGENVKEDR 469
Query: 489 TSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEAN 525
++ + DPFSR TR++ YY +E+ E N
Sbjct: 470 D--ESFDIKTDPFSRLKTRTKVYY-----QEIQEEEN 499
>gi|405973004|gb|EKC37744.1| RNA polymerase-associated protein RTF1-like protein [Crassostrea
gigas]
Length = 673
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 125/259 (48%), Gaps = 13/259 (5%)
Query: 276 WFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVT 335
W PFF++ + GC+VR+GIG + +YR+ + +D E + Y+L T K L +
Sbjct: 308 WCHMPFFKKTVCGCYVRIGIGNHEGRAVYRIAEI--IDTVETAKIYQLGTTRTNKGLKLK 365
Query: 336 WGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKESIQKINTFVY 395
G+ S +++ VS+ + EF +W + +P+ QD+ +K SIQ + +
Sbjct: 366 HGH--SERVYRLEFVSNQDFTDSEFFKWREAMTLGDLSLPTVQDIDKKARSIQDALNYKF 423
Query: 396 SAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKRLQELE--AS 453
+++++ EK+ P N A +K L ++ EVA D +I + L+ELE A+
Sbjct: 424 KENDIEEIVAEKQKFKKNPHNYAIKKTFLLKQKEVADLEGDTAAQYKISQELEELEERAN 483
Query: 454 RDSKVKDAKAIRLAEMNRKNRVENFKNASELKRVNTSLKAGEAGYDPFSRR------WTR 507
+ + ++ +N++NR+ N A E + L+ A DPF+RR T+
Sbjct: 484 ELDRRRTNNISSISYINQRNRLRNQILAEEASK-KEFLEMKNAVADPFTRRSCRPTLVTK 542
Query: 508 SRNYYISKPGEEVTAEANG 526
+RN IS + EA
Sbjct: 543 ARNPVISHSARDPEMEAKA 561
>gi|195488667|ref|XP_002092411.1| GE14177 [Drosophila yakuba]
gi|194178512|gb|EDW92123.1| GE14177 [Drosophila yakuba]
Length = 776
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 128/263 (48%), Gaps = 18/263 (6%)
Query: 257 RPTY----DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNV 312
RP + +D+ ++ + R K+ ++ P FE ++ CFVR+ IG + P+YR+ + V
Sbjct: 425 RPVFITTREDLNKLRLSRYKMERFVNLPIFESTVLNCFVRISIGNNGQKPVYRVAEI--V 482
Query: 313 DATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSG 372
E + Y L T + L + G + R + +S+ E EF +W +++
Sbjct: 483 GVVETGKIYSLGTTRTNRGLRLKHGTQERVFR--LEFISNQEFTENEFNKWNEVCQQSHV 540
Query: 373 RMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQ 432
+MPS + K+ I+K + + V ++++EK +RP N A +K L +E + A
Sbjct: 541 QMPSIDLIAIKQNDIKKALNYEFKDEDVDKIVEEKNRFRNRPTNYAMKKTCLMKERDAAM 600
Query: 433 SRHDEVDMERIKKRLQELE--ASRDSKVKDAKAIRLAEMNRKNRVENFKNAS----ELKR 486
R D + + +++ ELE AS K + ++ +N +NR +N ++A E R
Sbjct: 601 LRGDYDIAQDLGQQIDELENRASELDKRRSHTLNLISYINDRNRKKNVEDAEKAILEEAR 660
Query: 487 VNTSLKAGEAGYDPFSRRWTRSR 509
N LK DPF+RR T+ R
Sbjct: 661 ANKGLKIS----DPFTRRITQPR 679
>gi|20130239|ref|NP_611665.1| Rtf1 [Drosophila melanogaster]
gi|74872306|sp|Q9W261.1|RTF1_DROME RecName: Full=RNA polymerase-associated protein Rtf1; Short=dRtf1
gi|7291410|gb|AAF46837.1| Rtf1 [Drosophila melanogaster]
gi|363238656|gb|AEW12901.1| FI16824p1 [Drosophila melanogaster]
Length = 775
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 94/391 (24%), Positives = 170/391 (43%), Gaps = 51/391 (13%)
Query: 259 TYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPD 318
T +D+ ++ + R K+ ++ P FE ++ CFVR+ IG + P+YR+ + V E
Sbjct: 430 TREDLNKLRLSRYKMERFVNLPIFESTVLNCFVRISIGNNGQKPVYRVAEI--VGVVETG 487
Query: 319 RSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQ 378
+ Y L T + L + G + R + +S+ E EF +W +++ +MP+
Sbjct: 488 KIYSLGTTRTNRGLRLKHGTQERVFR--LEFISNQEFTENEFNKWNEVCQQSHVQMPTID 545
Query: 379 DVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEV 438
+ K+ I+K + + V ++++EK +RP N A +K L +E + A R D
Sbjct: 546 LIAIKQNDIKKALNYEFKDEDVDKIVEEKNRFRNRPTNYAMKKTCLMKERDAAMLRGDYD 605
Query: 439 DMERIKKRLQELE--ASRDSKVKDAKAIRLAEMNRKNRVENFKNAS----ELKRVNTSLK 492
+ + +++ ELE AS K + ++ +N +NR +N ++A E R N LK
Sbjct: 606 IAQDLGQQIDELENRASELDKRRSHTLNLISYINDRNRKKNVEDAEKAILEEARANKGLK 665
Query: 493 AGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANGEEGATGEVGMAATEA 552
DPF+RR T+ R + +E + PG E T + +T++
Sbjct: 666 IS----DPFTRRITQPRMGFKGAKKDEDDMQLAPLPPPPPGKKRPNEAGTSSASVRSTDS 721
Query: 553 ALEAAAGAGKLVDTNAPLDLGTESNMLHDFELDISLNALKKFGGPQGVLAGFMARKQRIE 612
D S LHDF++D+ + P V + +
Sbjct: 722 K-----------------DYSLYS--LHDFDIDLDV--------PLPVNTNSVPKP---- 750
Query: 613 ATVGCQVPENDGRRHALTLTVGDYKRRRGLL 643
+ E +R +L + DYK++RGL+
Sbjct: 751 ---ASKPAETVSKR---SLNLEDYKKKRGLI 775
>gi|159470283|ref|XP_001693289.1| Paf1 complex component [Chlamydomonas reinhardtii]
gi|158277547|gb|EDP03315.1| Paf1 complex component [Chlamydomonas reinhardtii]
Length = 656
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 184/385 (47%), Gaps = 28/385 (7%)
Query: 268 IRRSKLAKWFMEPFFE-ELIVGCFVRVGIG---RSKNGPIYRLCMVRNV-DATEPDRSYK 322
+ R +L +W+M+PFFE + + GC VR+ G R G + +V + D E R+YK
Sbjct: 287 VTRQQLEEWYMQPFFERDALNGCVVRMAYGPGVRDHAGNTHPGYLVMEIMDIKESGRAYK 346
Query: 323 L--ENRTTCKYLNVTWG---NESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSK 377
++ T K+L + G N + A MA VS P E+E++++ R + + ++
Sbjct: 347 FGPKSEMTNKHLVLRDGMGINRTMA----MANVSSKPFDEQEYERYKRHCSKTNRAPITR 402
Query: 378 QDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDE 437
++ E + Q + +++A +K L+ K++ + P+N AAEK L+R LE+AQ + +
Sbjct: 403 EEAAEATKRKQAAMNYRWTSADLKVELERKRAQRAAPVNPAAEKAMLKRRLELAQGQGNA 462
Query: 438 VDMERIKKRLQELEASRDSKVKDAKAIRLAEMNRKNRVENFKNASELKRVN-TSLKAGEA 496
++ ++++L LEA ++ + +A + ++N++N+ N A + + AGE
Sbjct: 463 DEVAALEEQLASLEAHLINQTNNQRAFGMMDINKRNKQHNLAVAYKTTAADEHGGGAGEG 522
Query: 497 GYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANGEEGATGEVGMAATEAALEA 556
G D FSRR T+ Y+ + G ++N A G G V T+AAL
Sbjct: 523 GTDVFSRRETKLNIYWKTNRGGGAD-DSNSAGAAAAARAQVCHG-PGRVCGLCTDAAL-- 578
Query: 557 AAGAGKLVDTNAPLDLGTESNMLHDFELDISLNALKKFGGPQGVLAGFMARKQRIEATVG 616
KL +D ++++ LD+ ++ ++ G G L + + A +
Sbjct: 579 ---PDKLTRAQQRMD---PADLIRQLGLDVDVSLVRAAGPAAGNLQQRILPHKWRGAALA 632
Query: 617 CQVPENDGRRHALTLTVGDYKRRRG 641
+ G+ LT+ D+KRR G
Sbjct: 633 AHATDLSGKS---VLTIADWKRRAG 654
>gi|162944900|gb|ABY20519.1| LP07508p [Drosophila melanogaster]
Length = 785
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 148/325 (45%), Gaps = 15/325 (4%)
Query: 259 TYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPD 318
T +D+ ++ + R K+ ++ P FE ++ CFVR+ IG + P+YR+ + V E
Sbjct: 430 TREDLNKLRLSRYKMERFVNLPIFESTVLNCFVRISIGNNGQKPVYRVAEI--VGVVETG 487
Query: 319 RSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQ 378
+ Y L T + L + G + R + +S+ E EF +W +++ +MP+
Sbjct: 488 KIYSLGTTRTNRGLRLKHGTQERVFR--LEFISNQEFTENEFNKWNEVCQQSHVQMPTID 545
Query: 379 DVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEV 438
+ K+ I+K + + V ++++EK +RP N A +K L +E + A R D
Sbjct: 546 LIAIKQNDIKKALNYEFKDEDVDKIVEEKNRFRNRPTNYAMKKTCLMKERDAAMLRGDYD 605
Query: 439 DMERIKKRLQELE--ASRDSKVKDAKAIRLAEMNRKNRVENFKNAS----ELKRVNTSLK 492
+ + +++ ELE AS K + ++ +N +NR +N ++A E R N LK
Sbjct: 606 IAQDLGQQIDELENRASELDKRRSHTLNLISYINDRNRKKNVEDAEKAILEEARANKGLK 665
Query: 493 AGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANGEEGATGEVGMAATEA 552
DPF+RR T+ R + +E + PG E T + +T++
Sbjct: 666 IS----DPFTRRITQPRMGFKGAKKDEDDMQLAPLPPPPPGKKRPNEAGTSSASVRSTDS 721
Query: 553 ALEAAAGAGKL-VDTNAPLDLGTES 576
+ +D + PL + T S
Sbjct: 722 KDYSLYSLHDFDIDLDVPLPVNTNS 746
>gi|403415141|emb|CCM01841.1| predicted protein [Fibroporia radiculosa]
Length = 544
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 135/503 (26%), Positives = 222/503 (44%), Gaps = 89/503 (17%)
Query: 3 DLENLLLEAAGRTNSAGRNRH--SASSSKRRREGSYSGSDSRDDDSDDNRGYGSRKPSGS 60
D+ + LLE AG T + R S S SKRR+ +D DDSDDN
Sbjct: 7 DISDELLELAGATEKKRKKRQAESKSGSKRRK------ADINVDDSDDN----------- 49
Query: 61 QVPLKKRLDPAERDDDQGSQEEGDYDGGASEHEGDSSNESDDDNHGQMTELEREMMIFER 120
+P S+EEG+ + +G NE+D + QM+E+ERE ++ +R
Sbjct: 50 -MP--------------ESEEEGN-ETNPYPLDGKFVNEADRNRLMQMSEIEREDILAQR 93
Query: 121 --------DDKKVDKNLRDKFRSRREERSTRSTKETPPLPSSRSARLAARSADRAAAKDD 172
D + +D+ L+ + R +E +++ K + A R A K+
Sbjct: 94 QEEMQRIQDKRNLDQMLQAQ-SGRGDENVSKAAKR--------------QHAVRGATKEK 138
Query: 173 A--LNELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSPVKRKAFTPAGLSSSSQSESESR 230
+ L+EL+AKR K +D E R +R SP + + +P + S E + +
Sbjct: 139 SRKLDELKAKR-KAKD-EKKR-----------TRTNSPRQDPSSSPVDMEMSDDEEEDGQ 185
Query: 231 SHSDDEGSTGDGGMADSDDDGAPGSGRPTYDDIKEITIRRSKLAKWFMEPFFEELIVGCF 290
+E D + D D T +D+++ + R LA++ M P+FEE + G +
Sbjct: 186 ISKYEEQEEKDRRLYDKFDKSKSDDEPATLEDLEKCQLSRDMLARFSMAPWFEEAVKGGW 245
Query: 291 VRVGIGRSKNGPIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMV 350
VR IG +YR+C V N+ TE + YK+ ++T + L + G S + M V
Sbjct: 246 VRFLIGMENGEGVYRICEVSNL-GTEVVKPYKVNDQTVDQQLELKHG--VSTKCFHMDKV 302
Query: 351 SDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKESIQKI------NTFVYSAATVKQML 404
S+S ++EF + R E ++PSK+ + +K I K + + + K+ L
Sbjct: 303 SNSRFEQKEFDRLSRTFEHEKLKLPSKRQLEKKAAQIIKFMNQRLTESDISAIVARKKQL 362
Query: 405 QEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKRLQELEAS------RDSKV 458
Q ++ P +A E+ RL + +A R D ++ I L+ L A+ RD
Sbjct: 363 QSGQTVQQSPAALALERARLAQARTLAGRRQDWDEVAAIDLELEALNATAPVVPPRDVSR 422
Query: 459 KDAKAIRLAEMNRKNRVENFKNA 481
D A R+ E NRK +E + A
Sbjct: 423 ADILA-RVNERNRKANMEAVRRA 444
>gi|195346702|ref|XP_002039896.1| GM15903 [Drosophila sechellia]
gi|194135245|gb|EDW56761.1| GM15903 [Drosophila sechellia]
Length = 775
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 94/391 (24%), Positives = 169/391 (43%), Gaps = 51/391 (13%)
Query: 259 TYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPD 318
T +D+ ++ + R K+ ++ P FE ++ CFVR+ IG + P+YR+ + V E
Sbjct: 430 TREDLNKLRLSRYKMERFVNLPIFESTVLNCFVRISIGNNGQKPVYRVAEI--VGVVETG 487
Query: 319 RSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQ 378
+ Y L T + L + G + R + +S+ E EF +W +++ +MP+
Sbjct: 488 KIYSLGTTRTNRGLRLKHGTQERVFR--LEFISNQEFTENEFNKWNEVCQQSHVQMPTID 545
Query: 379 DVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEV 438
+ K+ I+K + + V ++++EK +RP N A +K L +E + A R D
Sbjct: 546 LIAIKQNDIKKALNYEFKDEDVDKIVEEKNRFRNRPTNYAMKKTCLMKERDAAMLRGDYD 605
Query: 439 DMERIKKRLQELE--ASRDSKVKDAKAIRLAEMNRKNRVENFKNAS----ELKRVNTSLK 492
+ + +++ ELE AS K + ++ +N +NR +N ++A E R N LK
Sbjct: 606 IAQDLGQQIDELENRASELDKRRSHTLNLISYINDRNRKKNVEDAEKAILEEARANKGLK 665
Query: 493 AGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANGEEGATGEVGMAATEA 552
DPF+RR T+ R + +E + PG E T + T++
Sbjct: 666 IS----DPFTRRITQPRMGFKGAKKDEDDMQLAPLPPPPPGKKRPNEAGTSSASVRPTDS 721
Query: 553 ALEAAAGAGKLVDTNAPLDLGTESNMLHDFELDISLNALKKFGGPQGVLAGFMARKQRIE 612
D S LHDF++D+ + P V + +
Sbjct: 722 K-----------------DYSLYS--LHDFDIDLDV--------PLPVNTNSVPKP---- 750
Query: 613 ATVGCQVPENDGRRHALTLTVGDYKRRRGLL 643
+ E +R +L + DYK++RGL+
Sbjct: 751 ---ASKPAETVSKR---SLNLEDYKKKRGLI 775
>gi|25272005|gb|AAN74745.1| M2D3.3 protein [Marchantia polymorpha]
Length = 163
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 96/190 (50%), Gaps = 31/190 (16%)
Query: 457 KVKDAKAIRLAEMNRKNRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNY-YISK 515
K +A+ L EMNRKN++EN +NAS+L+ +N K G+ GYD R RS+NY +
Sbjct: 2 KTIYTEALALEEMNRKNKIENLRNASQLRPLNRHAKPGKGGYDSLYWRSMRSKNYMWKDG 61
Query: 516 PGEEVTAEANGDKNGVPGGANGEEGATGEVGMAATEAALEAAAGAGKLVDTNAPLDLGTE 575
P +E A+ G E A+GE AT + G V + P +
Sbjct: 62 PKDESIAD-------------GAEDASGEFRPDATSPKGRGLSKTG--VAESTPHE---- 102
Query: 576 SNMLHDFELDISLNALKKFGGPQGVLAGFMARKQRIEATVGCQVPEN--DGRRHALTLTV 633
LH+F+L ISL L+ Q +MARKQ++EA + EN DG +H T+TV
Sbjct: 103 ---LHNFDLKISLAPLQ-----QPAPRAYMARKQKLEALYSVPI-ENSDDGEQHPWTMTV 153
Query: 634 GDYKRRRGLL 643
DY RRRG L
Sbjct: 154 NDYFRRRGCL 163
>gi|195027107|ref|XP_001986425.1| GH21360 [Drosophila grimshawi]
gi|193902425|gb|EDW01292.1| GH21360 [Drosophila grimshawi]
Length = 796
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 121/253 (47%), Gaps = 6/253 (2%)
Query: 259 TYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPD 318
T +D+ ++ + R K+ ++ P FE +V CFVR+ IG + P+YR+ + V E
Sbjct: 450 TREDLNKLRLSRFKMERFVNLPIFESTVVNCFVRISIGNNGQKPVYRVAEI--VGVVETG 507
Query: 319 RSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQ 378
+ Y L T + L + G + R + +S+ E EF +W+ +++ MP+
Sbjct: 508 KIYSLGTTRTNRGLRLKHGTQERVFR--LEFISNQEFTETEFNKWVDICQQSHVPMPTID 565
Query: 379 DVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEV 438
+ K I+K + Y V ++++EK +RP N A +K L +E + A R D
Sbjct: 566 LIEIKANDIKKALNYEYKDEDVDKIVEEKNRFRNRPTNYAMKKTCLMKERDAAMLRGDYD 625
Query: 439 DMERIKKRLQELE--ASRDSKVKDAKAIRLAEMNRKNRVENFKNASELKRVNTSLKAGEA 496
+ +++ +LE AS K + ++ +N +NR N ++A + G+
Sbjct: 626 IANDLGQQIDQLESRASELDKRRSHSLNLISYINDRNRKRNVQDAEKAIMEEARANKGQK 685
Query: 497 GYDPFSRRWTRSR 509
DPF+RR T+ R
Sbjct: 686 ISDPFTRRITQPR 698
>gi|157272120|ref|XP_001648109.1| hypothetical protein AaeL_AAEL003976 [Aedes aegypti]
gi|108880464|gb|EAT44689.1| AAEL003976-PA [Aedes aegypti]
Length = 787
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 177/386 (45%), Gaps = 49/386 (12%)
Query: 261 DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRS 320
+++ ++ I R K+ ++ P F+++++ CFVR+ IG + P+YR+ + V E +
Sbjct: 448 EELNKLRISRHKIERFIALPMFDQIVLNCFVRINIGNNNGRPVYRVAEI--VGVVETAKI 505
Query: 321 YKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDV 380
Y+ T K + G++ R + +S+ + E+++WL E +P DV
Sbjct: 506 YQFGKCRTNKGFRLKHGSQERVFR--LEFISNQDFTDSEYQKWLSVCEATGTALPY-VDV 562
Query: 381 LEKKE-SIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVD 439
+EKK+ I++ + + A + ++++EK + P N A +K L +E + AQ R ++
Sbjct: 563 IEKKQREIKEAIQYEFKDADIDKLIEEKNRFRAHPTNYAMKKTLLMKERDAAQLRGEDEL 622
Query: 440 MERIKKRLQELE--ASRDSKVKDAKAIRLAEMNRKNRVENFKNASELKRVNTSLKAGEAG 497
+ ++ ELE AS K + + ++ +N +NR N ++A + + G
Sbjct: 623 ARDLNTQIMELEERASTLDKKRSSSISLISYINDRNRKRNVEDAEKAIKEEIRATRGMKI 682
Query: 498 YDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANGEEGATGEVGMAATEAALEAA 557
DPF+RR T+ R ++ +A+ N VP + M A +
Sbjct: 683 EDPFTRRQTQPR----------MSFKASEKNNEVPT-----------IQMPAPPPPGQKK 721
Query: 558 AGAGKLVDTNAPLDLGTESNMLHDFELDISLNALKKFGGPQGVLAGFMARKQRIEATVGC 617
K ++A +L + LHDFE+D+ + P G + + V
Sbjct: 722 KPDEKKAASSADNNLYS----LHDFEIDLDVPL------PVGSV-------NVLPKPVEK 764
Query: 618 QVPENDGRRHALTLTVGDYKRRRGLL 643
V E+ +R +L + DYK++RGL+
Sbjct: 765 PVKESGPKR---SLNLEDYKKKRGLI 787
>gi|195585680|ref|XP_002082608.1| GD11662 [Drosophila simulans]
gi|194194617|gb|EDX08193.1| GD11662 [Drosophila simulans]
Length = 775
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 94/391 (24%), Positives = 169/391 (43%), Gaps = 51/391 (13%)
Query: 259 TYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPD 318
T +D+ ++ + R K+ ++ P FE ++ CFVR+ IG + P+YR+ + V E
Sbjct: 430 TREDLNKLRLSRYKMERFVNLPIFESTVLNCFVRISIGNNGQKPVYRVAEI--VGVVETG 487
Query: 319 RSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQ 378
+ Y L T + L + G + R + +S+ E EF +W +++ +MP+
Sbjct: 488 KIYSLGTTRTNRGLRLKHGTQERVFR--LEFISNQEFTENEFNKWNEVCQQSHVQMPTID 545
Query: 379 DVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEV 438
+ K+ I+K + + V ++++EK +RP N A +K L +E + A R D
Sbjct: 546 LIAIKQNDIKKALNYEFKDEDVDKIVEEKNRFRNRPTNYAMKKTCLMKERDAAMLRGDYD 605
Query: 439 DMERIKKRLQELE--ASRDSKVKDAKAIRLAEMNRKNRVENFKNAS----ELKRVNTSLK 492
+ + +++ ELE AS K + ++ +N +NR +N ++A E R N LK
Sbjct: 606 LAQDLGQQIDELENRASELDKRRSHTLNLISYINDRNRKKNVEDAEKAILEEARANKGLK 665
Query: 493 AGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANGEEGATGEVGMAATEA 552
DPF+RR T+ R + +E + PG E T + T++
Sbjct: 666 IS----DPFTRRITQPRMGFKGAKKDEDDMQLAPLPPPPPGKKRPNEAGTSSASVRPTDS 721
Query: 553 ALEAAAGAGKLVDTNAPLDLGTESNMLHDFELDISLNALKKFGGPQGVLAGFMARKQRIE 612
D S LHDF++D+ + P V + +
Sbjct: 722 K-----------------DYSLYS--LHDFDIDLDV--------PLPVNTNSVPKP---- 750
Query: 613 ATVGCQVPENDGRRHALTLTVGDYKRRRGLL 643
+ E +R +L + DYK++RGL+
Sbjct: 751 ---ASKPAETVSKR---SLNLEDYKKKRGLI 775
>gi|402591880|gb|EJW85809.1| plus-3 domain-containing protein [Wuchereria bancrofti]
Length = 463
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 79/146 (54%), Gaps = 5/146 (3%)
Query: 280 PFFEELIVGCFVRVGIGRSKNG-PIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGN 338
PFF + ++GCFVR+GIGR+K G +YR + +D E + Y+LEN T K L + G
Sbjct: 316 PFFNKTVIGCFVRIGIGRNKEGRSVYRAAQI--LDVVETAKVYQLENTRTNKGLKLKHGE 373
Query: 339 ESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKESIQKINTFVYSAA 398
E +++ VS+S EF +W ++ N+ + + V +K+ IQK + Y+
Sbjct: 374 EERV--YRLEFVSNSEFTSHEFNKWYDAMKSNNLSILTIDQVEKKEADIQKAVNYNYTDK 431
Query: 399 TVKQMLQEKKSASSRPLNVAAEKDRL 424
++ M+QEK PLN A EK L
Sbjct: 432 DIELMVQEKMRFQKAPLNYALEKGNL 457
>gi|53131208|emb|CAG31800.1| hypothetical protein RCJMB04_11g9 [Gallus gallus]
Length = 585
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 131/258 (50%), Gaps = 13/258 (5%)
Query: 253 PGSGRPTY--DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVR 310
P +P +++ + + R KL +W PFF + + GCFVR+GIG + P+YR+ +
Sbjct: 307 PPKSQPVSLPEELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAEIT 366
Query: 311 NVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERN 370
V E + Y+L T K L + G++ R + VS+ E EF +W +
Sbjct: 367 GV--VETAKVYQLGGTRTNKGLQLRHGSDQRVFR--LEFVSNQEFTESEFMKWKEAMFSA 422
Query: 371 SGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEV 430
++P+ ++ +K+ SI++ + ++ ++++++EK+ P N A +K +L +E +
Sbjct: 423 GMQLPTLDEINKKEVSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKAM 482
Query: 431 AQSRHDEVDMERIKKRLQELEASRDS----KVKDAKAIRLAEMNRKNRVENFKNASELKR 486
A+ D+ ++I+ +L ELE ++ + K+ AI + +N++NR N SE
Sbjct: 483 AEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAI--SYINQRNREWNIVE-SEKAL 539
Query: 487 VNTSLKAGEAGYDPFSRR 504
V S DPF+RR
Sbjct: 540 VAESHSMKNQQMDPFTRR 557
>gi|294658999|ref|XP_461329.2| DEHA2F22682p [Debaryomyces hansenii CBS767]
gi|202953538|emb|CAG89734.2| DEHA2F22682p [Debaryomyces hansenii CBS767]
Length = 549
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 121/523 (23%), Positives = 225/523 (43%), Gaps = 82/523 (15%)
Query: 93 EGDSSNESDDDNHGQMTELEREMMIFERDDKKVDKNLRDKFRSRREERSTRSTKETPPLP 152
EG +E D +N M E++RE +F+R + N + + R +++S +
Sbjct: 82 EGKYKDEEDRENLLSMDEIKREQTLFDRTQEMESYNEKKYLQQRMKQQSQGA-------- 133
Query: 153 SSRSARLAARSADRA-----AAKDDALNELRAKRLKQQDPEAHRRLRDASRGGSGSRVLS 207
S A RS++R ++K D L+ELR +R ++ R +RG
Sbjct: 134 ---SGAKATRSSNRTKVPGKSSKLDKLSELRKQR--------EQKSRKENRGDYDD---- 178
Query: 208 PVKRKAFTPAGLSSSSQSESESRSHSDDEGSTGDGGMADSDDDGAPGSG----------- 256
++ G +++ E DDE G G +D+ GSG
Sbjct: 179 ------YSDEG-EENNEDGDERGFIEDDEDEYGYG-----EDEVVWGSGTSSKFKKRSNE 226
Query: 257 RPTYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSK--NGPIYRLCMVRNVDA 314
R +D+ + RS L K F + ++ CF R+ IG K P+YR+ + +V
Sbjct: 227 RAKLEDVNRTRVGRSILLKHCFYSDFADTVIDCFARINIGVDKRTKQPMYRMVQISDVKN 286
Query: 315 TEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRM 374
P+++Y N YL V N+ + M++ SDSP L EEF ++L E+ + +
Sbjct: 287 I-PEKAYSTPNFKCDIYLTVNQ-NKEQRKDFPMSIFSDSPILPEEFDRYLHELNKTGEDI 344
Query: 375 PSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASS--RPLNVAAEKDRLRRELEVAQ 432
DV EK ES+Q + S V +M+ +K+ S + + +K R+ +L++A+
Sbjct: 345 SYLDDVNEKYESLQYLLNRGVSDKDVNEMIAKKQKLQSNIQGYDAVFQKTRVMDQLKIAK 404
Query: 433 SRHDEVDMERIKKRLQELEASRDSKVKDAKAI----RLAEMNRKNRVENFKNASELKRVN 488
++ ++ + +L +L+ S+ + ++++N +NR N N ++ +
Sbjct: 405 QENNLSKVKELSDKLHKLDQVLISQTQSQNGSDSFNSMSKVNERNRKLNLLNIDRVESKS 464
Query: 489 TSLK--AGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANGEEGATGEVG 546
+ + A G DPFSR TR++ +Y +++ + N E A +
Sbjct: 465 SQQRKLAEFDGGDPFSRLKTRTKVFY-----QDLINQEN-------------EKAIDDAK 506
Query: 547 MAATEAALEAAAGAGKLVDTNAPLDLGTESNMLHDFELDISLN 589
M E + K+ ++ LG N++ + +LD+ +N
Sbjct: 507 MNYETLVAEKSEKEAKIARSSYRC-LGVMDNLIKEIDLDLEIN 548
>gi|409047625|gb|EKM57104.1| hypothetical protein PHACADRAFT_254665 [Phanerochaete carnosa
HHB-10118-sp]
Length = 522
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 147/610 (24%), Positives = 258/610 (42%), Gaps = 123/610 (20%)
Query: 3 DLENLLLEAAGRTNSAGRNRHSASSSKRRREGSYSGSDSRDDDSDDNRGYGSRKPSGSQV 62
D + LLE AG T R R + S KRRR +D+ DS+ + +
Sbjct: 7 DFSDELLELAGATEKKRRKRQADKSMKRRR------ADAVHSDSESDHAH---------- 50
Query: 63 PLKKRLDPAERDDDQGSQEEGDYDGGASEHEGDSSNESDDDNHGQMTELEREMMIFER-- 120
PA DD + EG +++D +MTE+ERE ++ +R
Sbjct: 51 -------PASDKDD---------NSNPYPLEGKYIDDTDRSRLMEMTEIEREDILAQRQE 94
Query: 121 ------DDKKVDKNLRDKFRSRREERSTRSTKETPPLPSSRSARLAARSADRAAAKDDAL 174
D + +D LRD+ + + S + ++ A R A R ++ L
Sbjct: 95 EIQRIQDKRNLDAMLRDRTGTGEDSVSKAAKRQH-----------AQRGATREKSR--KL 141
Query: 175 NELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSPVKRKAFTPAGLSSSSQSESESRSHSD 234
+EL+AKR K +D + +R SP + ++ +P + +S D
Sbjct: 142 DELKAKR-KAKDEKKR------------TRTDSPRRDRSSSPMDMETS-----------D 177
Query: 235 DEGSTGDGGMAD-SDDDGAPGSGRPTYDD-------IKEITIRRSKLAKWFMEPFFEELI 286
DE G D DD S R DD + I + R ++AK + P+FE+L+
Sbjct: 178 DEEEDGQIDKYDIYDDKERRSSNRAKADDAPAILAELMSIFLTRDQIAKNYYAPWFEDLV 237
Query: 287 VGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQ 346
G +VR IG IYR C + V A + YK+ + + L + G S +
Sbjct: 238 KGAWVRYCIGYEDGHSIYRACEIVEV-APKLVTPYKINEQPANQELILRHG--VSEKSFP 294
Query: 347 MAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQE 406
M M+S+S ++E+ + +R E + ++P++ +V +K I+K+ + + A + M+
Sbjct: 295 MNMISNSNVTDKEWNRVVRVCEAENVKLPTQHEVNKKFLQIKKLTSQALTEADISVMITR 354
Query: 407 KKSASSR--PLNVAAEKDRLRRELEVAQSRHDEVDMERIKKRLQELEASRDSKVKDAKAI 464
K + + + EK RL + +A R+D V++ I +L L ++ + ++A
Sbjct: 355 KTQMNKKQNAAQITLEKSRLNQARTLALRRNDLVEVADIDAKLIALTGETTARPRSSQAD 414
Query: 465 RLAEMNRKNRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEA 524
LA +N +NR N + A + + + K RR + + + + + V
Sbjct: 415 ELARLNERNRKANIEAARKADMLESERK----------RRERKLAHAHGAATPDRVRMLK 464
Query: 525 NGD-KNGVPGGANGEEGATGEVGMAATEAAL-----EAAAGAGKLVDTNAPLDLGT--ES 576
NGD + G PG V ++ TEA+ E+ AG+ + P D G E+
Sbjct: 465 NGDSRPGTPG-----------VPISKTEASTPAPRSESPAGSS----STKPGDTGVSFET 509
Query: 577 NMLHDFELDI 586
++L D ++D+
Sbjct: 510 SVLDDVDIDL 519
>gi|170040269|ref|XP_001847927.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167863854|gb|EDS27237.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 811
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 95/391 (24%), Positives = 182/391 (46%), Gaps = 55/391 (14%)
Query: 259 TYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPD 318
T D++ ++ + R K+ ++ P F+ +++ CFVR+ IG + P+YR+ + V E
Sbjct: 470 TRDELNKLRLSRHKIERFIALPMFDTIVLNCFVRINIGNNNGRPVYRVAEI--VGVVETA 527
Query: 319 RSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQ 378
+ Y+ T K + G++ +++ +S+ + E+++WL E MP
Sbjct: 528 KIYQFGRGRTNKGFKLKHGSQERV--FRLEFISNQDFTDSEYQKWLSVCEATGTPMPC-V 584
Query: 379 DVLEKKES-IQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDE 437
D++++K S I++ + + A + ++++EK + P N A +K L +E + AQ R ++
Sbjct: 585 DIIDRKASEIKEAIQYEFKDADIDKIIEEKNRFRAHPTNYAMKKTLLMKERDAAQLRGED 644
Query: 438 VDMER-IKKRLQELE--ASRDSKVKDAKAIRLAEMNRKNRVENFKNASELKRVNTSLKA- 493
D+ R + ++QELE AS K + + ++ +N +NR N ++A K + ++A
Sbjct: 645 -DLARDLNTQIQELEERASHLDKRRSSSISLISYINDRNRKRNVEDAE--KAIMEEIRAT 701
Query: 494 -GEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANGEEGATGEVGMAATEA 552
G DPF+RR T+ R + AN + + M A
Sbjct: 702 RGIKIEDPFTRRQTQPRMSF---------------------KANEKRDEPEAMQMPAPPP 740
Query: 553 ALEAAAGAGKLVDTNAPLDLGTESNMLHDFELDISLNALKKFGGPQGVLAGFMARKQRIE 612
+ K ++A +L + LHDFE+D+ + P + A + K
Sbjct: 741 PGQKKKPDEKRASSSADNNLYS----LHDFEIDLDV--------PLPISAVNVLPK---- 784
Query: 613 ATVGCQVPENDGRRHALTLTVGDYKRRRGLL 643
V V E+ +R +L + DYK++RGL+
Sbjct: 785 -PVEKPVKESGPKR---SLNLEDYKKKRGLI 811
>gi|389746244|gb|EIM87424.1| plus-3-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 541
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 137/535 (25%), Positives = 245/535 (45%), Gaps = 80/535 (14%)
Query: 55 RKPSGSQVPLKKRLDPAERDDDQG---SQEEGDYDGGASEHEGDSSNESDDDNHGQMTEL 111
R+ +G++ +++ + AE+ + +G EE + D E ++E D + QM E+
Sbjct: 25 RRQNGAKGSKRRKAEAAEQTESEGDGPESEEEENDLNPYPLENKYTDEYDREQLLQMPEM 84
Query: 112 EREMMIFERDDK----KVDKNLRDKFRSRREERSTRSTKETPPLPSSRSARLAARSADRA 167
ERE ++ +R ++ + +NL F++ +E + S++A+ A A R
Sbjct: 85 EREEVLAQRQEELQRIQDKRNLDQMFKAMKEGGVDDDS-------VSKAAKRA--HAVRG 135
Query: 168 AAKDDA--LNELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSPVKRKAFTPAGLSSSSQS 225
A K+ + L+EL+A+R K +D ++ SR SP KR SSS
Sbjct: 136 ATKEKSRKLDELKARR-KAKD------VKKKSRS-------SPEKRD-------RSSSPM 174
Query: 226 ESESRSHSDDEGSTGDGGMADSDDDGAPGSGRP-----TYDDIKEITIRRSKLAKWFMEP 280
+ E+ D++G + + G P T D+++I + R LAK + P
Sbjct: 175 DMETSDEDDEDGQITREEQEEERERRILGKHNPEEEKITVLDLEKIRLTRDALAKHCLSP 234
Query: 281 FFEELIVGCFVRVGIGRSKNGPIYRLCMVRN--VDATEPDRSYKLENRTTCKYLNVTWGN 338
+FE+ + G +VR IG+ N P+YR+C + N VD +P YK+ ++ + L + G
Sbjct: 235 WFEDYVKGAWVRYLIGQEGNQPVYRICEISNLAVDLAKP---YKINDQLIDQNLELKHGT 291
Query: 339 ESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKESIQKINTFVYSAA 398
A + M VS++ EF++ L+ E + ++P K+ V +K IQK+ + + +
Sbjct: 292 AVKA--FPMDKVSNAVFTAREFERLLKTCEGENVKLPLKRQVEKKAMQIQKLTSQPLTES 349
Query: 399 TV------KQMLQEKKSASSRPLNVA--AEKDRLRRELEVAQSRHDEVDMERIKKRLQEL 450
V K +QE+ + SS+ N A EK R+ + +A R+D ++ + K+L+E+
Sbjct: 350 DVSAVLLRKSQIQERANPSSK-TNAARLLEKTRIIQMRNLAMKRNDRAEVAVLDKQLEEI 408
Query: 451 EAS---------RDSKVKDAKAIRLAEMNRKNRVENFKNASEL-------KRVNTSLKAG 494
A+ R+ +V D A ++ E NRK E + A++ +R AG
Sbjct: 409 LATIAADPNFKEREPEVADIMA-KVNERNRKANQEAMRLAAQADAERRRKERQAALTGAG 467
Query: 495 EAGYDPFSRRWTRSRNYYISK--PGEEVTAEAN-GDKNGVPGGANGEEGATGEVG 546
DP +R T R + + PG G + +PG A+ +T V
Sbjct: 468 NVPIDPSARLKTVPRMFASRQGTPGNATPLPTTPGSASPLPGAASPASPSTKPVA 522
>gi|195122196|ref|XP_002005598.1| GI20555 [Drosophila mojavensis]
gi|193910666|gb|EDW09533.1| GI20555 [Drosophila mojavensis]
Length = 777
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 122/257 (47%), Gaps = 14/257 (5%)
Query: 259 TYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPD 318
T +D+ ++ + R K+ ++ P FE +V CFVR+ IG + P+YR+ + V E
Sbjct: 433 TREDLNKLRLSRFKMERFVNLPIFECTVVNCFVRISIGNNGQKPVYRVAEI--VGVVETG 490
Query: 319 RSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQ 378
+ Y L T + L + G + R + +S+ E EF +W ++ MP+
Sbjct: 491 KIYTLGTTRTNRGLRLKHGTQERVFR--LEFISNQEFTETEFNKWYEVCQQQHVPMPTMD 548
Query: 379 DVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEV 438
+ K+ I+K + + V ++++EK +RP N A +K L +E + A R D
Sbjct: 549 LIEIKQNDIKKALNYEFKDEDVDKIVEEKNRFRNRPTNYAMKKTCLMKERDAAMLRGDYD 608
Query: 439 DMERIKKRLQELE--ASRDSKVKDAKAIRLAEMNRKNRVENFKNAS----ELKRVNTSLK 492
+ +++ +LE AS K + ++ +N +NR N ++A E R N +K
Sbjct: 609 IANELGQQIDQLESRASELDKRRSHSLNLISYINDRNRKRNVQDAEKAIMEEARANKGMK 668
Query: 493 AGEAGYDPFSRRWTRSR 509
DPF+RR T+ R
Sbjct: 669 IS----DPFTRRITQPR 681
>gi|255087190|ref|XP_002505518.1| PAF1 complex protein [Micromonas sp. RCC299]
gi|226520788|gb|ACO66776.1| PAF1 complex protein [Micromonas sp. RCC299]
Length = 604
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 135/268 (50%), Gaps = 22/268 (8%)
Query: 263 IKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATE-PDRSY 321
I I + R L++W EPF E GCFVR+ +G +++ + + V E ++Y
Sbjct: 213 IMSIVLTRDTLSRWITEPFVETCAPGCFVRISVGVNRHTGENKYALGEIVGVAEGKHKAY 272
Query: 322 KLE---------NRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSG 372
L+ + T K+L + +G + A + +A VS+SP + E+ W ++E++
Sbjct: 273 NLKEYEYPHKGSGKWTNKWLLLRYGRDERA--FMIAEVSNSPVTDAEYGAWRAQLEKDGV 330
Query: 373 RMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSR---PLNVAAEKDRLRRELE 429
+ P +D+ + +I+ + Y++ +++ML K A R N+A++K+ +RR +E
Sbjct: 331 KFPQLRDINAAQSNIKAAQDYRYTSEDIQKMLS--KRAEKRLGLQQNLASQKENIRRLIE 388
Query: 430 VAQSRHDEVDMERIKKRL-QELEASRDSKVKDAKAIRLAEMNRKNRVENFKN----ASEL 484
A+ D+ + +++++ Q +E + K A +A +N+KN N N ASE
Sbjct: 389 RAKMDGDDEAVANLEEQMAQVMEKLKVRLDKGGTAEMMAAINKKNNAVNDANLSRIASEQ 448
Query: 485 KRVNTSLKAGEAGYDPFSRRWTRSRNYY 512
S A ++ DPFSRR T++ YY
Sbjct: 449 VARAKSGAADQSANDPFSRRPTKAATYY 476
>gi|426194136|gb|EKV44068.1| hypothetical protein AGABI2DRAFT_194936 [Agaricus bisporus var.
bisporus H97]
Length = 520
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 136/583 (23%), Positives = 241/583 (41%), Gaps = 103/583 (17%)
Query: 1 MADLENLLLEAAGRTNSAGRNRHSASSSKRRREGSYSGSDSRDDDSDDNRGYGSRKPSGS 60
M+DL++ +LE AG + H + +KRR+E + SDS
Sbjct: 1 MSDLDDEILELAGAVEKKRKRSHGSKPNKRRKEDPLATSDS------------------E 42
Query: 61 QVPLKKRLDPAERDDDQGSQEEGDYDGGASEHEGDSSNESDDDNHGQMTELEREMMIFER 120
+P EEGD D +G +E D QM+E+ERE ++ +R
Sbjct: 43 HLP---------------ESEEGDSD--PYPLDGKYKDEYDRQLLLQMSEVEREDVLSQR 85
Query: 121 DDKKVDKNLRDKFRSRREERSTRSTKETPPLPSSRSARLAARS-ADRAAAKDDA--LNEL 177
++K + L DK + + R P A+ A R R A K+ + L EL
Sbjct: 86 MEEK--QQLLDKRLLSQMVQQQRGGA-----PDDTVAKAAKRQHTARGATKEKSSKLAEL 138
Query: 178 RAKRLKQQDPEAHRRLRDASRGGSGSRVLSPVKRKAFTPAGLSSSSQSESESRSHSDDEG 237
+A+R + +D + S SP + ++ +P + S +G
Sbjct: 139 KARR----------KAKDERKRNS-----SPKRDRSSSPMDMEIS-------------DG 170
Query: 238 STGDGGMADSDD---------DGAPGSGRP-TYDDIKEITIRRSKLAKWFMEPFFEELIV 287
+ DG + + D P T DI+ + R LAK + P++E+ +
Sbjct: 171 ESEDGQITKLEQEEEKVGRIFDKPSSENEPITCSDIERCRLTRDLLAKHALAPWYEDYVK 230
Query: 288 GCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQM 347
G FVR +G+ +GP+YR+C ++N+ A + + YK++ + + L + G S + M
Sbjct: 231 GAFVRYLVGQDSHGPVYRICQIQNL-AADFVKPYKIDEKMVNQALELKHGK--SVRVFPM 287
Query: 348 AMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEK 407
VS+ L +EF++W E ++P+K+D+ K ++K+ + + + + ML K
Sbjct: 288 DKVSNGGFLGKEFERWKNTCESEEVKLPTKRDLDHKYAQLRKLPSQPITESDINAMLARK 347
Query: 408 KSASSRPL--NVAAEKDRLRRELEVAQSRHDEVDMERIKKRLQELEASRDSKVKDAKAIR 465
+ N E+ RL +A R+D ++ +I +L L R S+ +
Sbjct: 348 SQLQTHKSSGNNTLERSRLNAARALAIRRNDTEELAQIDDQLASLGPIR-SRHSEESVDP 406
Query: 466 LAEMNRKNRVENFKNASELKRVNTSLKAGE----------AGYDPFSRRWTRSRNYYISK 515
LA++N +NR N + + + V ++ K E DP +R T R + +
Sbjct: 407 LAKVNERNRKANMEAVRQAELVASARKRNERKLAAAGTPTPASDPSARLRTLPRMFNSAT 466
Query: 516 PGEEVTAEANGDKNGV----PGGANGEEGATGEVGMAATEAAL 554
P +G + P A+ G+T G EA++
Sbjct: 467 PTTSRPGTPSGTSQPIVAPTPLPASALSGSTNSGGAKTFEASV 509
>gi|409078135|gb|EKM78499.1| hypothetical protein AGABI1DRAFT_60711 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 520
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 136/575 (23%), Positives = 242/575 (42%), Gaps = 87/575 (15%)
Query: 1 MADLENLLLEAAGRTNSAGRNRHSASSSKRRREGSYSGSDSRDDDSDDNRGYGSRKPSGS 60
M+DL++ +LE AG + H + +KRR+E + SDS
Sbjct: 1 MSDLDDEILELAGAVEKKRKRSHGSKPNKRRKEDLLATSDS------------------E 42
Query: 61 QVPLKKRLDPAERDDDQGSQEEGDYDGGASEHEGDSSNESDDDNHGQMTELEREMMIFER 120
+P EEGD D +G +E D QM+E+ERE ++ +R
Sbjct: 43 HLP---------------ESEEGDLD--PYPLDGKYKDEYDRQLLLQMSEVEREDVLSQR 85
Query: 121 DDKKVDKNLRDKFRSRREERSTRSTKETPPLPSSRSARLAARS-ADRAAAKDDA--LNEL 177
++K + L DK + + R P A+ A R R A K+ + L EL
Sbjct: 86 MEEK--QQLLDKRLLSQMVQQQRGGA-----PDDTVAKAAKRQHTARGATKEKSSKLAEL 138
Query: 178 RAKRLKQQDPEAHRRLRDASRGGSGSRVLSPVKRKAFTPAGLSSSSQSESESRSHSDDEG 237
+A+R + +D + S SP + ++ +P + S + + ++
Sbjct: 139 KARR----------KAKDERKRNS-----SPKRDRSSSPMDMEISDGESEDGQITKLEQE 183
Query: 238 STGDGGMADSDDDGAPGS-GRP-TYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGI 295
G + D P S P T DI+ + R LAK + P++E+ + G FVR +
Sbjct: 184 EEKVGRIFDK-----PSSENEPITCSDIERCRLTRDLLAKHALAPWYEDYVKGAFVRYLV 238
Query: 296 GRSKNGPIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPP 355
G+ +GP+YR+C ++N+ A + + YK++ + + L + G S + M VS+
Sbjct: 239 GQDSHGPVYRICQIQNL-AADFVKPYKIDEKMVNQALELKHGK--SVRVFPMDKVSNGGF 295
Query: 356 LEEEFKQWLREVERNSGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPL 415
L +EF++W E ++P+K+D+ K ++K+ + + + + ML K +
Sbjct: 296 LGKEFERWKNTCESEEVKLPTKRDLDHKYAQLRKLPSQPITESDINAMLARKSQLQTHKS 355
Query: 416 --NVAAEKDRLRRELEVAQSRHDEVDMERIKKRLQELEASRDSKVKDAKAIRLAEMNRKN 473
N E+ RL +A R+D ++ +I +L L R S+ + LA++N +N
Sbjct: 356 SGNNTLERSRLNAARALAIRRNDTEEVAQIDDQLASLGPIR-SRHSEESVDPLAKVNERN 414
Query: 474 RVENFKNASELKRVNTSLKAGE----------AGYDPFSRRWTRSRNYYISKPGEEVTAE 523
R N + + + V ++ K E DP +R T R + + P
Sbjct: 415 RKANMEAVRQAELVASARKRNERKLAAAGTPTPASDPSARLRTLPRMFNSATPTTSRPGT 474
Query: 524 ANGDKNGV----PGGANGEEGATGEVGMAATEAAL 554
+G + P A+ G+T G EA++
Sbjct: 475 PSGTSQPIVAPTPLPASALSGSTNSGGAKTFEASV 509
>gi|195384395|ref|XP_002050903.1| GJ22408 [Drosophila virilis]
gi|194145700|gb|EDW62096.1| GJ22408 [Drosophila virilis]
Length = 778
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 122/257 (47%), Gaps = 14/257 (5%)
Query: 259 TYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPD 318
T +D+ ++ + R K+ ++ P FE +V CFVR+ IG + P+YR+ + V E
Sbjct: 434 TREDLNKLRLSRFKMERFVNLPIFESTVVNCFVRISIGNNGQKPVYRVAEI--VGVVETG 491
Query: 319 RSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQ 378
+ Y L T + L + G + R + +S+ E EF +W+ ++ MP+
Sbjct: 492 KIYTLGTTRTNRGLRLKHGTQERVFR--LEFISNQEFTETEFNKWVEICQQQHVPMPTID 549
Query: 379 DVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEV 438
+ K I+K + + V ++++EK +RP N A +K L +E + A R D
Sbjct: 550 LIEIKANDIKKALNYEFKDEDVDKIVEEKNRFRNRPTNYAMKKTCLMKERDAAMLRGDYD 609
Query: 439 DMERIKKRLQELE--ASRDSKVKDAKAIRLAEMNRKNRVENFKNAS----ELKRVNTSLK 492
+ +++ +LE AS K + ++ +N +NR N ++A E R N +K
Sbjct: 610 IANDLGQQIDQLESRASELDKRRSHSLNLISYINDRNRKRNVQDAEKAIMEEARANKGMK 669
Query: 493 AGEAGYDPFSRRWTRSR 509
DPF+RR T+ R
Sbjct: 670 IS----DPFTRRITQPR 682
>gi|793868|emb|CAA89011.1| HRA458 [Saccharomyces cerevisiae]
gi|1589348|prf||2210407C HRA458 gene
Length = 458
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 149/331 (45%), Gaps = 56/331 (16%)
Query: 232 HSDDEGS-TGDGGMADSDDDGAPGSGRPTYD---------------------DIKEITIR 269
+ DDEGS GD D++ P R TYD D ++ I
Sbjct: 97 YKDDEGSEYGD------DEEYNPFDRRDTYDKREEVEWAEEEDEQDREPEISDFNKLRIG 150
Query: 270 RSKLAKWFMEPFFEELIVGCFVRVGIGRSKNG--PIYRLCMVRNVDATEPDRSYKLENRT 327
RS +AK+ P FE+ + GC+ RV +G K YR+ + V +P Y +
Sbjct: 151 RSFVAKFCFYPGFEDAVKGCYGRVNVGTDKRTGKTSYRMVRIERVFLQKP---YNMGKFY 207
Query: 328 TCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEK-KES 386
T +Y VT G + +QM SD E+E++++LR ++ + PS + K KE
Sbjct: 208 TNQYFGVTQGKDRKV--FQMNYFSDGLFAEDEYQRYLRALDNSQMIKPSLHSLSNKTKEV 265
Query: 387 IQKINTFVYSAAT---VKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMER- 442
+ +NT + T V+ +Q K S N EK LR +L+ A+ ++E D+ +
Sbjct: 266 MDFVNTPLTDKTTDEVVRHRMQFNKKLSG--TNAVLEKTVLREKLQYAKETNNEKDIAKY 323
Query: 443 ------IKKRLQELEASRDSKVKDAKAI-RLAEMNRKNRVENFKNASELKRVNTSLKAGE 495
+KR+ E ++ D K + L NRK + N +NA +K+ +++ +
Sbjct: 324 SAQLRNFEKRMSVYEKHHENDQSDIKKLGELTSKNRKLNMSNIRNAEHVKKEDSN--NFD 381
Query: 496 AGYDPFSRRWTRSRNYYISKPGEEVTAEANG 526
+ DPFSR TR++ YY +E+ E N
Sbjct: 382 SKSDPFSRLKTRTKVYY-----QEIQKEENA 407
>gi|50289403|ref|XP_447133.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526442|emb|CAG60066.1| unnamed protein product [Candida glabrata]
Length = 566
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 129/272 (47%), Gaps = 37/272 (13%)
Query: 262 DIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSK--NGPIYRLCMVRNVDATEPDR 319
D +I I RS +AK+ P F ELI GC+ RV +G K YR+ + V +P
Sbjct: 251 DFNKIRIGRSFVAKYCFYPGFNELIQGCYGRVNVGVDKRTGNAAYRMVKIEKVFLQKP-- 308
Query: 320 SYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQD 379
Y + T +Y VT G + +QM SD P +E+EF+++L+ ++ ++ PS +
Sbjct: 309 -YNMGKFFTNQYFGVTQGKDRKV--FQMNFFSDGPFVEQEFERYLKALDSSNIPKPSPYN 365
Query: 380 VLEKKESIQKINTFVYSAATVK--------QMLQEKKSASSRPLNVAAEKDRLRRELEVA 431
+ K ++I+ F+ T K +M+ KK + + N EK L+ +L A
Sbjct: 366 I---KTKFKEISEFISQPLTEKLTDEIVRNRMVLNKKLSGT---NAVLEKTILKDKLRYA 419
Query: 432 QSRHDEVDMERIKKRLQEL-------EASRDSKVKDAKAIR-LAEMNRKNRVENFKNASE 483
+ +E D+ + K+L+ E ++ D K + L NRK + +NA
Sbjct: 420 KENGNEHDIAKYSKQLRNFEKRMAMYEKHHENDQADIKKLEGLTSKNRKLNMNRIRNAES 479
Query: 484 LKR---VNTSLKAGEAGYDPFSRRWTRSRNYY 512
+K+ VN K+ DPFSR TR++ YY
Sbjct: 480 IKKEEDVNFDSKS-----DPFSRLKTRTKVYY 506
>gi|268559176|ref|XP_002637579.1| Hypothetical protein CBG19313 [Caenorhabditis briggsae]
Length = 601
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 162/338 (47%), Gaps = 40/338 (11%)
Query: 262 DIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGR-SKNGPIYRLCMVRNVDATEPDRS 320
++K+ + R KL+ PFF+ +VGC+V++G G S + YR+ + V+ T ++
Sbjct: 252 ELKKSRLSRHKLSLMVHAPFFDSTVVGCYVKLGQGTISGSDSKYRIWKIVGVEET--NKV 309
Query: 321 YKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDV 380
Y LE + T K + +G R M VS++ + EF +WL + G +P+ D+
Sbjct: 310 YDLEGKKTNKSIKCQFGKTERPFR--MQFVSNADFEQVEFTEWL-AATKAYGVVPT-VDI 365
Query: 381 LEKKE-SIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVD 439
++KK I+K YS V QM+QEK N A K L R+ E+AQ R D +
Sbjct: 366 MDKKRLDIEKAINHKYSDKEVDQMVQEKSKFQKVTRNFAMTKAGLSRQKELAQQRGDIRE 425
Query: 440 MERIKKRLQELEASRDSKVKD-AKAIR-LAEMNRKNRVENFKNASELKRVNTSLKAGEAG 497
ER++K + E+E + D K +K+I +A +N +NR+ + K+A + +K E
Sbjct: 426 AERVQKEIDEIERTADELDKQRSKSISAIAFINHRNRM-SIKDA----MLTGQVKIEENN 480
Query: 498 Y-DPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANGEEGATGEVGMAATEAALEA 556
DPF+R+ K G V + G K+ + G + T +E E+
Sbjct: 481 QDDPFTRK----------KGGMRVVS---GSKSKLDGTLSNSSSTT-----NLSETGKES 522
Query: 557 AAGAGKLVDTNAPLDLGTESNM--LHDFELDISLNALK 592
A L N P ++NM LHDF+L+I LK
Sbjct: 523 TAKPT-LPPPNLP---KKKTNMSSLHDFDLEIDFGKLK 556
>gi|118091596|ref|XP_421139.2| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Gallus
gallus]
Length = 670
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 172/381 (45%), Gaps = 45/381 (11%)
Query: 253 PGSGRPTY--DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVR 310
P +P +++ + + R KL +W PFF + + GCFVR+GIG + P+YR+ +
Sbjct: 307 PPKSQPVSLPEELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAEIT 366
Query: 311 NVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERN 370
V E + Y+L T K L + G++ R + VS+ E EF +W +
Sbjct: 367 GV--VETAKVYQLGGTRTNKGLQLRHGSDQRVFR--LEFVSNQEFTESEFMKWKEAMFSA 422
Query: 371 SGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEV 430
++P+ ++ +K+ SI++ + ++ ++++++EK+ P N A +K +L +E +
Sbjct: 423 GMQLPTLDEINKKEVSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKAM 482
Query: 431 AQSRHDEVDMERIKKRLQELEASRDS----KVKDAKAIRLAEMNRKNRVENFKNASELKR 486
A+ D+ ++I+ +L ELE ++ + K+ AI + +N++NR N SE
Sbjct: 483 AEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAI--SYINQRNREWNIVE-SEKAL 539
Query: 487 VNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANGEEGATGEVG 546
V S DPF+RR KP T +N V + A G
Sbjct: 540 VAESHSMKNQQMDPFTRRQC--------KP----TIVSNSRDPAVQAAILAQLNAKYGSG 587
Query: 547 MAATEAALEAAAGAGKLVDTNA--PLDLGTESNMLHDFELDISLN-------ALK----- 592
+ +A + + G GK D N+ DL + +HDF++ I L AL
Sbjct: 588 VLP-DAPKDMSKGQGKDKDVNSKSASDLSEDLFKVHDFDVKIDLQVPSSESKALAITSKA 646
Query: 593 ---KFGGPQGVL--AGFMARK 608
K G P+ L + R+
Sbjct: 647 PPAKDGAPRRSLNLEDYKKRR 667
>gi|158300586|ref|XP_320467.4| AGAP012057-PA [Anopheles gambiae str. PEST]
gi|157013231|gb|EAA00301.5| AGAP012057-PA [Anopheles gambiae str. PEST]
Length = 808
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 92/397 (23%), Positives = 175/397 (44%), Gaps = 70/397 (17%)
Query: 262 DIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRSY 321
++ ++ I R KL ++ P FE ++ CFVR+ IG ++ P+YR+ + V E + Y
Sbjct: 467 ELNKLRISRHKLERFINLPIFEPTVMNCFVRINIGNNQGKPVYRVAEI--VGVVETAKIY 524
Query: 322 KLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVL 381
+ T K + G++ +++ VS+ + E+++WL E +P+ +
Sbjct: 525 QFGRSRTNKGFKLKHGSQERV--FRLEFVSNQDFSDTEYQKWLTVCEATGTPLPTVDMIE 582
Query: 382 EKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDME 441
K+ I++ + + + A + ++++EK + P N A +K L +E + AQ R ++
Sbjct: 583 RKQRDIKEASQYEFKDADIDRLVEEKNRFRAHPTNYAMKKTILMKERDAAQLRGEDDLAR 642
Query: 442 RIKKRLQELE--ASRDSKVKDAKAIRLAEMNRKNRVENFKNAS----ELKRVNTSLKAGE 495
+ ++QE+E AS K + + ++ +N +NR N ++A E KR LK
Sbjct: 643 ELNSQIQEIEERASTLDKKRSSSISLISYINDRNRKRNVEDAEKAIMEEKRATRGLKIE- 701
Query: 496 AGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANGEEGATGEVGMAATEAALE 555
DPF+RR T+ R ++ + + ++ P M +A
Sbjct: 702 ---DPFTRRQTQPR----------MSFKKDDKRDDTP--------------MLPMQAPPP 734
Query: 556 AAAGAGKLVDTNAPLDLGTESNM--LHDFELDI-------SLNALKKFGGPQGVLAGFMA 606
K + P ++N+ LHDF++D+ S+N L K
Sbjct: 735 PGQAGKKKSEEKKPNQGTADNNLYSLHDFDIDLEVPLPISSVNVLPK------------- 781
Query: 607 RKQRIEATVGCQVPENDGRRHALTLTVGDYKRRRGLL 643
V V E+ +R +L + DYK++RGL+
Sbjct: 782 -------PVEKPVRESGPKR---SLNLEDYKKKRGLI 808
>gi|312382127|gb|EFR27686.1| hypothetical protein AND_05286 [Anopheles darlingi]
Length = 457
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 125/253 (49%), Gaps = 6/253 (2%)
Query: 262 DIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRSY 321
++ ++ I R KL ++ P FE ++ CFVR+ IG ++ P+YR+ + V E + Y
Sbjct: 134 ELNKLRISRHKLERFINLPIFEPTVMNCFVRINIGNNQGKPVYRVAEI--VGVVETAKIY 191
Query: 322 KLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVL 381
+ T K + G++ R + VS+ + E+++WL E +P+ +
Sbjct: 192 QFGRSRTNKGFKLKHGSQERVFR--LEFVSNQDFSDTEYQKWLTVCEATGTPLPTVDMIE 249
Query: 382 EKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDME 441
K+ +++ + + + A + ++++EK + P N A +K L +E + AQ R D+
Sbjct: 250 RKQRDVKEASQYEFKDADIDRLIEEKNRFRAHPTNYAMKKTILMKERDAAQLRGDDDIAR 309
Query: 442 RIKKRLQELE--ASRDSKVKDAKAIRLAEMNRKNRVENFKNASELKRVNTSLKAGEAGYD 499
+ ++QE+E AS K + + ++ +N +NR N ++A + G+ D
Sbjct: 310 DLSSQIQEIEERASTLDKKRSSSISLISYINDRNRKRNVEDAEKAIMEEKRASRGQKIED 369
Query: 500 PFSRRWTRSRNYY 512
PF+RR T+ R +
Sbjct: 370 PFTRRQTQPRMSF 382
>gi|351707409|gb|EHB10328.1| RNA polymerase-associated protein RTF1-like protein [Heterocephalus
glaber]
Length = 704
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 102/431 (23%), Positives = 185/431 (42%), Gaps = 73/431 (16%)
Query: 253 PGSGRPTY--DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVR 310
P +P +++ + + R KL +W PFF + + GCFVR+GIG + P+YR+ +
Sbjct: 307 PPKSQPVSLPEELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAEIT 366
Query: 311 NVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERN 370
V E + Y+L T K L + G++ R + VS+ E EF +W +
Sbjct: 367 GV--VETAKVYQLGGTRTNKGLQLRHGSDQRVFR--LEFVSNQEFTESEFMKWKEAMFSA 422
Query: 371 SGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRE--- 427
++P+ ++ +K+ SI++ + ++ ++++++EK+ P N A +K +L +E
Sbjct: 423 GMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKFR 482
Query: 428 ------LEVAQSR-----------------------HDEVDMERIKKRLQELEASRDS-- 456
L A+ R D+ ++I+ +L ELE ++
Sbjct: 483 ACHMRYLACARLRGLGCRTSCGRSSRISVQAMAEDLGDQDKAKQIQDQLNELEERAEALD 542
Query: 457 --KVKDAKAIRLAEMNRKNRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYIS 514
+ K+ AI + +N++NR N SE V S DPF+RR
Sbjct: 543 RQRTKNISAI--SYINQRNREWNIVE-SEKALVAESHNMRNQQMDPFTRRQC-------- 591
Query: 515 KPGEEVTAEANGDKNGVPGGANGEEGATGEVGMAATEAALEAAAGAGKLVDTNAPLDLGT 574
KP + + + N + G +G + A E + + G K +++ + DL
Sbjct: 592 KPTIVSNSRDPAVQAAILAQLNAKYG-SGVLPDAPKEISKASGQGKDKDLNSKSASDLSE 650
Query: 575 ESNMLHDFELDISLNALKKFGGPQGVLAGFMARKQRIEATVGCQVPENDG--RRHALTLT 632
+ +HDF++ I L + + + A P DG RR +L
Sbjct: 651 DLFKVHDFDVKIDLQV--------------PSSESKALAITSKAPPAKDGAPRR---SLN 693
Query: 633 VGDYKRRRGLL 643
+ DYK+RRGL+
Sbjct: 694 LEDYKKRRGLI 704
>gi|363749821|ref|XP_003645128.1| hypothetical protein Ecym_2597 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888761|gb|AET38311.1| Hypothetical protein Ecym_2597 [Eremothecium cymbalariae
DBVPG#7215]
Length = 562
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 120/477 (25%), Positives = 202/477 (42%), Gaps = 75/477 (15%)
Query: 82 EGDYDGGASEHE--------GDSSNESDDDNHGQMTELEREMMIFERDDKKVDKNLRDKF 133
EG+ DG E E G +E D + M E+ERE ++FER + R
Sbjct: 76 EGNDDGSGDEQEERNPYPLEGKYKDEEDRNRIQDMPEMERETLLFERSQEMQKYQERKVL 135
Query: 134 RSR-REERSTRSTKETPPLPSSRSARLAARSADRAAAKDDALNELRAKRLKQQDPEAHRR 192
R R + R+ + ++ + RS+ + R+ + + L+ELR +R K+
Sbjct: 136 RQRAKSIRAQQQQRQLQKDSTKRSSGRSTRTTGHSELRTSKLSELRKQRAKK-------- 187
Query: 193 LRDASRGGSGSRVLSPVKRKAFTPAGLSSSSQSESESRSHSDDEGSTGDGGMADSDDDGA 252
SG+ ++ + S QS++ + S +DD SD D
Sbjct: 188 --------SGNY--------DYSESEEDESDQSDNYAESDNDDYDPHHGHKDGFSDHDNE 231
Query: 253 PGSGRPTYD------DIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNG--PIY 304
D D ++ I RS +AK+ P F E + C+ RV IG K+ P+Y
Sbjct: 232 VKWAEEDLDRDAELEDFNKVKIGRSFVAKFCFYPDFAERVQACYGRVNIGLDKHTGLPMY 291
Query: 305 RLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWL 364
R+ + V +P Y + T +Y VT G + +QM SD P + EF+++L
Sbjct: 292 RMVKIERVFLQKP---YSMGKFFTNQYFGVTQGKDRKV--FQMNYFSDGPITQPEFERYL 346
Query: 365 REVERNSGRMPSKQDVLEKKESIQKINTFVYSAATVK--------QMLQEKKSASSRPLN 416
++ + PS + K +++ FV T+K +M+ KK + N
Sbjct: 347 NQMAKYDMNKPSLYTLNNK---AKELFNFVSQPMTMKLTDQIVRNRMVFNKKLTGT---N 400
Query: 417 VAAEKDRLRRELEVAQSRHDEVDMERIKKRLQELEASRDSKVK----DAKAIR----LAE 468
EK L+ +L+ A+ ++E + + +L+ LE S K D IR L
Sbjct: 401 AVLEKSVLKDKLQYAKDTNNESAVAKYAAQLKNLEKRMSSYEKHHENDQTGIRKLGALTS 460
Query: 469 MNRKNRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEAN 525
NRK ++ + A +++ ++S +A DPFSR TR++ YY +E+ E N
Sbjct: 461 KNRKVNMDKIRLAENVRKEDSS--NVDAKSDPFSRLKTRTKIYY-----QEIQQEEN 510
>gi|254583221|ref|XP_002499342.1| ZYRO0E09526p [Zygosaccharomyces rouxii]
gi|238942916|emb|CAR31087.1| ZYRO0E09526p [Zygosaccharomyces rouxii]
Length = 560
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 120/473 (25%), Positives = 202/473 (42%), Gaps = 64/473 (13%)
Query: 83 GDYDGGASEH------EGDSSNESDDDNHGQMTELEREMMIFERDDKKVDKNLRDKFRSR 136
GDYD E EG +E+D D G + E+ERE M+FER R FR R
Sbjct: 70 GDYDDEEEEEENPFPLEGKYKDEADRDYLGGLPEMERETMLFERSQIMQKYQDRKMFRQR 129
Query: 137 -----REERSTRSTKETPPLPSSRSARLAARSADRAAAKDDALNELRAKRLKQQDPEAHR 191
+++ ++ +E SS + +A +D A+K L++LR +R K+ +R
Sbjct: 130 GKNLKEQQQRSKQQEEGKKTRSSTRSTVATGHSDIKASK---LSQLRKQREKKSQ---NR 183
Query: 192 RLRDASRGGSGSRVLSPVKRKAFTPAGLSSSSQSES-ESRSHSDDEGSTGDGGMADSDDD 250
D G + K ++ S SR D++ D + +
Sbjct: 184 PYSDEEEEGEDEGDDYGYEDKKYSDEEDEEEYDPYSRRSRFEEDEDEVQWAEEALDREAN 243
Query: 251 GAPGSGRPTYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNG--PIYRLCM 308
A D + I RS +A + P F +++ G + RV +G K +YR+
Sbjct: 244 VA---------DFNKAKIGRSFVANFCFYPGFNDIVRGNYGRVNVGTDKRSGETLYRMVK 294
Query: 309 VRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVE 368
+ V +P Y + T +Y VT G + +QM SD ++EF++++ +E
Sbjct: 295 IEKVFLQKP---YNMGKFITNQYFGVTQGKDRKV--FQMRYFSDGAITQQEFERYMHALE 349
Query: 369 RNSGRMPSKQDVLEKKESIQKINTFVYSAATVK--------QMLQEKKSASSRPLNVAAE 420
R+ PS V + ++IN+FV T + +M+ KK + +N E
Sbjct: 350 RDHITGPS---VYSLENKAKEINSFVSQPLTEQLTNDIVRNRMVFNKKLSG---VNAVLE 403
Query: 421 KDRLRRELEVAQSRHDEVDMERIKKRLQELE--------ASRDSKVKDAKAIRLAEMNRK 472
K L+ +L+ A +E D+ + +L+ E + KV K L NR+
Sbjct: 404 KTVLKEKLQYAMETKNERDIAKYSSQLRSFEKRMSTYEKQHENDKVGINKLNALTTKNRR 463
Query: 473 NRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEAN 525
++ KNA ++K+ +TS ++ DPFSR TR++ YY +E+ E N
Sbjct: 464 VNIDRLKNAEQVKKEDTSF---DSKSDPFSRLKTRTKFYY-----QEIQKEEN 508
>gi|66807937|ref|XP_637691.1| hypothetical protein DDB_G0286523 [Dictyostelium discoideum AX4]
gi|60466123|gb|EAL64188.1| hypothetical protein DDB_G0286523 [Dictyostelium discoideum AX4]
Length = 627
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 123/244 (50%), Gaps = 12/244 (4%)
Query: 268 IRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRSYKLENRT 327
+ R+ L KW +P+FE FVRV IG N PIYR+ + V+ + YK+EN+
Sbjct: 272 LSRNMLVKWVDQPYFERYAPNFFVRVVIGSHLNNPIYRIAEI--VEIRTGHKQYKVENKE 329
Query: 328 TCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKESI 387
T K L +++ S + + VS++ E ++W+ ++ R +P+ +++ K I
Sbjct: 330 TDKLLVLSYA--GSTKEFGIENVSNNAITPAEHEKWISDMVRAKQVLPTPEEIDMKIGDI 387
Query: 388 QKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDR---LRRELEVAQSRHDEVDMERIK 444
+K + Y+ +++ ++ P+N+A EK + LR L+ QS+ E+I+
Sbjct: 388 KKAQDYTYTNEDIEKRASDRSKYLKTPVNIAIEKAKSIALRETLD-PQSQEYRTICEKIE 446
Query: 445 KRLQELEASRDSKVKDAKAIRLAEMNRKNRVENFKNASELKRVNTSLKAGEAGYDPFSRR 504
+ + + ++ V + + +N+KN+ NFK S + TS + +DPF+RR
Sbjct: 447 ELTKLAISIKEENVSKVDQL-IQTINKKNKSLNFKYQSTTQ---TSTEQVSNEFDPFARR 502
Query: 505 WTRS 508
TR+
Sbjct: 503 KTRN 506
>gi|238883242|gb|EEQ46880.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 569
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 106/453 (23%), Positives = 211/453 (46%), Gaps = 34/453 (7%)
Query: 93 EGDSSNESDDDNHGQMTELEREMMIFER----DDKKVDKNLRDKFRSRREERSTRSTKET 148
EG +E+D + M E+ERE ++FER D + K L+++ + +++++
Sbjct: 90 EGKYKDEADREALDNMDEMEREQILFERMQEMDKYRERKYLQERMKQQQQQQQKNVVGRI 149
Query: 149 PPLPSSRSARLAARSADRAAAKDDALNELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSP 208
P SS ++ + AK D L+ELR KQ+ + R+ R + GS
Sbjct: 150 EPTRSSGRSKTGLK-----PAKKDKLSELR----KQRAQHSKRKSRREADYAEGSEDEED 200
Query: 209 VKRKAFTPAGLSSSSQSESESRSHSDDEGSTGDGGMADSDDDGAPGSGRPTYDDIKEITI 268
+ + E + D +G+ GG + + + +DI I +
Sbjct: 201 EDDEEPEEEEEEDDDEEGFEEDYYDDYDGTVAWGGPSKVKKKRSTELAK--LEDINRIKV 258
Query: 269 RRSKLAKWFMEPFFEELIVGCF--VRVGIGRSKNGPIYRLCMVRNVDATEPDRSYKLENR 326
R+ L ++ FE+ IV F + +G+ RS PIYR+ + +V + P+R+YKL +
Sbjct: 259 GRTILTQYCFHSGFEDTIVDTFGKINLGMDRSTRQPIYRMVKIIDV-KSRPERAYKLGHS 317
Query: 327 TTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKES 386
+L V+ N+ + M++ SDSP ++EF ++L+E+ + + DV K +
Sbjct: 318 NFDIFLTVSQ-NKDQKKDFPMSIFSDSPINQDEFDRYLKELNKTDEVIEFLDDVNSKFDE 376
Query: 387 IQKINTFVYSAATVKQMLQEKKSASSRPLNVAA-----EKDRLRRELEVAQSRHDEVDME 441
+ K + + + M+ K+ + N++ K L L++A+ + + ++
Sbjct: 377 LTKFYSKGLTDKDINDMIARKQKIQEKKGNISMYDAVNRKTNLLDRLKIAKQQGNLEKVQ 436
Query: 442 RIKKRLQELEASRDSKVKD---AKAIR-LAEMNRKNRVENFKNA--SELKRVNTSLKAGE 495
I ++L++++ +S+ + +K++ + +N +NR N N +E+K +T+ +
Sbjct: 437 EIIEKLKDIDEILESQTSNQPTSKSLNTMTLVNERNRKLNSTNIRKAEIKFKSTAAQQQS 496
Query: 496 AGYDPFSRRWTRSRNYY---ISKPGEEVTAEAN 525
G DPFSR T +R +Y I++ E+ + N
Sbjct: 497 DG-DPFSRLKTATRMFYQDLINQENEKALKDVN 528
>gi|195426288|ref|XP_002061271.1| GK20812 [Drosophila willistoni]
gi|194157356|gb|EDW72257.1| GK20812 [Drosophila willistoni]
Length = 831
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 122/253 (48%), Gaps = 6/253 (2%)
Query: 259 TYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPD 318
T +D+ ++ + R K+ ++ P FE ++ CFVR+ IG + +YR+ + V E
Sbjct: 472 TREDLNKLRLSRHKMERFVNLPIFEATVMNCFVRISIGNNDQKAVYRVAEI--VGVVETG 529
Query: 319 RSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQ 378
+ Y L T + L + G +S +++ +S+ E EF +W +++ +MP+
Sbjct: 530 KIYTLGTTRTNRGLRLKHG--TSERVFRLEFISNQEFTESEFNKWSEVCQQSHVQMPTID 587
Query: 379 DVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEV 438
+ K+ I+K + Y V ++++EK +RP N A K L +E + A R +
Sbjct: 588 LIEIKQGDIRKALNYEYKDEDVDKIVEEKNRFRNRPTNYAMRKTCLMKERDAAMLRGEYN 647
Query: 439 DMERIKKRLQELE--ASRDSKVKDAKAIRLAEMNRKNRVENFKNASELKRVNTSLKAGEA 496
+ + ++ +LE AS K + ++ +N +NR N ++A + G+
Sbjct: 648 LAQDLGTQIDQLESRASELDKRRSHTLNLISYINDRNRKRNVEDAEKAIMEEARANKGQK 707
Query: 497 GYDPFSRRWTRSR 509
DPF+RR T+ R
Sbjct: 708 ISDPFTRRITQPR 720
>gi|260942495|ref|XP_002615546.1| hypothetical protein CLUG_04428 [Clavispora lusitaniae ATCC 42720]
gi|238850836|gb|EEQ40300.1| hypothetical protein CLUG_04428 [Clavispora lusitaniae ATCC 42720]
Length = 550
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 111/446 (24%), Positives = 200/446 (44%), Gaps = 56/446 (12%)
Query: 93 EGDSSNESDDDNHGQMTELEREMMIFERDDKKVDKNLRDKFRSRREERSTRSTKETPPLP 152
EG +E+D ++ +M E+ERE +FER +++D+ K+ +R ++ + E
Sbjct: 90 EGKYRDEADREHLLEMDEIEREQTLFERS-QEMDRYNEKKYLQQRMKQQKSAGVEKKTRS 148
Query: 153 SSRSARLAARSADRAAAKDDALNELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSPVKRK 212
SSR A A S + + K D L+ELR +R + K +
Sbjct: 149 SSRKA---ATSGSKGS-KSDKLSELRKQREQ--------------------------KSR 178
Query: 213 AFTPAGLSSSSQSESESRSHSDDEGSTGDGGMADSDDDGAPGSG----------RPTYDD 262
D EG DG +D+ GSG R +
Sbjct: 179 KAADDYEEDEEDDNEAFAEDEDLEGEYDDG----YEDEVIWGSGSSKFKPRSFERAGVEH 234
Query: 263 IKEITIRRSKLAKWFMEPFFEELIVGCF--VRVGIGRSKNGPIYRLCMVRNVDATEPDRS 320
I I RS L+K+ F ++I F + VG+ R P+YR+ + + + P +
Sbjct: 235 FNRIRIGRSFLSKYLYYRQFGDVISKTFGKINVGMDRRTRRPLYRVVQIEEL-VSHPHKQ 293
Query: 321 YKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDV 380
Y+L + T YL V+ N+S + +++ SD+ EEF+++++E+ + + +P D+
Sbjct: 294 YRLGDTKTDFYLVVSQ-NKSQTKEFPLSVFSDADITPEEFERYVQELNKTNEDVPYVDDI 352
Query: 381 LEKKESIQKINTFVYSAATVKQMLQEKKSASS--RPLNVAAEKDRLRRELEVAQSRHDEV 438
EK E + ++ S + M+ +K+ + +K R+R EL+VA+ D
Sbjct: 353 NEKAEQLHQLMNSGLSNKDIDDMVTKKQKMQGGISSFDAVYQKSRVRDELKVAKQEGDVA 412
Query: 439 DMERIKKRLQELE--ASRDSKVKDAKAIR-LAEMNRKNRVENFKNASELKRVNTSL-KAG 494
++ + RL++LE +D++ A ++ ++++N +NR N N + + ++ L K G
Sbjct: 413 RVKELSDRLRKLEDILYKDTERTSAGSMNDMSKVNERNRKLNQTNIRKAELKSSHLRKTG 472
Query: 495 EAGY-DPFSRRWTRSRNYYISKPGEE 519
E DPFSR T +R +Y EE
Sbjct: 473 ELDEGDPFSRLKTTTRIFYQELVNEE 498
>gi|401625865|gb|EJS43852.1| rtf1p [Saccharomyces arboricola H-6]
Length = 565
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 112/473 (23%), Positives = 197/473 (41%), Gaps = 86/473 (18%)
Query: 93 EGDSSNESDDDNHGQMTELEREMMIFERDDKKVDKNLRDKFRSRREERSTRSTKETPPLP 152
EG +ESD D+ + E+ERE ++FER R FR+R + + K
Sbjct: 87 EGKYKDESDRDHLESLPEMERETLLFERSQIMQKYQERKLFRARGRDMKEQQQKAKDN-E 145
Query: 153 SSRSARLAARSADRAAAKDDALNELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSPVKRK 212
SR R + RS D ++A +L Q + R K +
Sbjct: 146 DSRKTRTSTRSTHATGHSD-----IKASKLSQLKKQRAR------------------KNR 182
Query: 213 AFTPAGLSSSSQSESESRSHSDDEGSTGDGGMADSDDDGAPGSGRPTYD----------- 261
++ + E ++ ++EGS + D++ P + YD
Sbjct: 183 QYSDNEEEKDDEDEYIDDNYKNEEGSE-----YEDDEEYNPFDRKGLYDKREEEVEWAEE 237
Query: 262 ------------DIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNG--PIYRLC 307
D ++ I RS +AK+ P FE+++ GC+ RV IG K YR+
Sbjct: 238 EEDELDRDPEISDFNKLRIGRSFVAKFCFYPGFEDVVKGCYGRVNIGTDKRTGKTSYRMV 297
Query: 308 MVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREV 367
+ + +P Y + T +Y VT G + +QM SD ++E++++L+ +
Sbjct: 298 RIERIFLQKP---YNMGKFYTNQYFGVTQGKDRKV--FQMNYFSDGLFTDDEYQRYLKAL 352
Query: 368 ERNSGRMPSKQDVLEKKESIQKINTFVYSAAT-------VKQMLQEKKSASSRPLNVAAE 420
+ + PS + + +I+++ FV + T V+ +Q K S N E
Sbjct: 353 DSSHMVKPSLRSL---SNTIKEVMDFVNTPLTDKTTDEVVRHRMQFNKKLSG--TNAVLE 407
Query: 421 KDRLRRELEVAQSRHDEVDMER-------IKKRLQELEASRDSKVKDAKAI-RLAEMNRK 472
K LR +L+ A+ ++E D+ + +KR+ E ++ D K + L NRK
Sbjct: 408 KTVLRGKLQYAKETNNEKDIAKYSAQLRNFEKRMSVYEKHHENDQSDIKKLGDLTSKNRK 467
Query: 473 NRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEAN 525
+ N ++A +K+ + S ++ DPFSR TR++ YY +E+ E N
Sbjct: 468 LNMNNIRSAEHVKKEDNS--NFDSKSDPFSRLKTRTKVYY-----QEIQKEEN 513
>gi|395324260|gb|EJF56704.1| plus-3-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 548
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 107/438 (24%), Positives = 208/438 (47%), Gaps = 65/438 (14%)
Query: 63 PLKKRLDPAERDDDQGSQEEGDYDGGASEH--EGDSSNESDDDNHGQMTELEREMMIFER 120
P +++ D + + + Q E + + ++ + EG +E D + M E+ERE ++ +R
Sbjct: 32 PKRRKADTNDETESEAGQPESEEETESNPYPLEGKFIDEEDRNRLMDMPEIEREEVLAQR 91
Query: 121 --------DDKKVDKNLRDKFRSRR---EERSTRSTKETPPLPSSRSARLAARSADRAAA 169
D +++D+ L K RS E+ +++ K + A R A
Sbjct: 92 QEELQRFADKRQLDQML--KLRSGAGGGEDAVSKAAKR--------------QHAIRGAT 135
Query: 170 KDDA--LNELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSPVKRKAFTPAGLSSSSQSES 227
K+ L+EL+AKR K +D E R +R SP + ++ +P + S + E
Sbjct: 136 KEKTRKLDELKAKR-KAKD-EKKR-----------TRTNSPKRDRSSSPMDMDMSDEEEE 182
Query: 228 ESRSHSDDEGSTGD----GGMADSDDDGAPGSGRPTYDDIKEITIRRSKLAKWFMEPFFE 283
+ + DE D G +A ++ T +D+++ + R+++AK+ M P+F
Sbjct: 183 DGQITKYDEEEERDRKLFGKVAPEEELSI------TLEDLEKCRVTRNQIAKYCMAPWFG 236
Query: 284 ELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPD-RSYKLENRTTCKYLNVTWGNESSA 342
E I G +VR IG P+YR+C V VD E + YK+ ++ + L + G S
Sbjct: 237 EYIKGAWVRYLIGEENKQPVYRICEV--VDLPEATVKPYKVNDQLVNQELELKHGG--ST 292
Query: 343 ARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKESIQKINTFVYSAATVKQ 402
R+ M +S+ P E+EF++ + E ++P ++ + +K +QK+ + + +
Sbjct: 293 RRFAMDKISNGPFEEKEFERLQKTCETEKVKLPMRRQLEKKTAQLQKLANQPMTESDIAA 352
Query: 403 MLQEKK----SASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKRLQELEASRDSKV 458
+LQ K+ S + ++ E+ RL++ +A R D ++ +I +L EL+A+ +
Sbjct: 353 ILQRKRDINVSVNKSSTSLTMERSRLQQARTLAIRRQDFAEVAQIDAKLAELQANAPVRG 412
Query: 459 KDAKAIR--LAEMNRKNR 474
++ + LA++N +NR
Sbjct: 413 REEEGSSDILAKLNERNR 430
>gi|429858800|gb|ELA33607.1| RNA polymerase ii transcription elongation factor [Colletotrichum
gloeosporioides Nara gc5]
Length = 613
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 172/358 (48%), Gaps = 37/358 (10%)
Query: 258 PTYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGR-SKNGPI-YRLCMVRNVDAT 315
P D + I + +S+ A++ P FE ++GC+VR+ +G K G YR+ ++ +
Sbjct: 263 PDMRDFERIRVGKSRFAEYCFNPGFESAMIGCYVRISLGPDPKTGADEYRMARIQAITVG 322
Query: 316 EPDRSYKLE----NRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNS 371
+P Y + + T +Y+ G + +SD P E E+ ++ + ++ +
Sbjct: 323 KP---YAMTGPGGSFVTDQYVLAAHGKAERP--FPFIFLSDRPFTEREYNRYEKVIQADG 377
Query: 372 GRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVA 431
MP KQ +L+K + I + + + + + +Q +KSA + + ++RL +++++A
Sbjct: 378 LNMPKKQTLLDKIDDINHLVNYHLTTTEIDERIQ-RKSALRKKFDPKI-RERLAQDIDIA 435
Query: 432 QSRHDEVDMERIKKRLQELEAS--------RDSKVK---DAKAIRLAEMNRKNRVENFKN 480
+++ + E ++++L +L+ + DS+ K ++ RLA +NR+ R++N +N
Sbjct: 436 RAQGNTRKAEDLQEQLDDLKTNVLAFKTSLSDSQSKPSATSQQDRLANINRQRRLQNAEN 495
Query: 481 A--------SELKRVNTSLKAGEAGYDPFSRRW-TRSRNYYISKPGEEVTAEANGDKNGV 531
+E +++ +L+ GE + SRR T+++ + K G + + NG
Sbjct: 496 VRKAQLKEKAEARKLEAALERGEDIKNDLSRRLRTKAKFIHDVKDGVKKPSSTNGSNAST 555
Query: 532 PGGANGEEGATGEVGMAATEAALEAAAGAGKLVDT-NAPLDLGTESNMLHDFELDISL 588
P + GA + A L+AA K + T + PL + +++ +LDI +
Sbjct: 556 PANGTPQLGAQKSGSLLPHLAKLQAANQEKKGIPTIHKPL---MDDDIIGALDLDIDV 610
>gi|323337728|gb|EGA78972.1| Rtf1p [Saccharomyces cerevisiae Vin13]
Length = 490
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 110/438 (25%), Positives = 179/438 (40%), Gaps = 80/438 (18%)
Query: 93 EGDSSNESDDDNHGQMTELEREMMIFERDDKKVDKNLRDKFRSR---REERSTRSTKETP 149
EG +ESD ++ + E+ERE ++FER R FR+R +E+ R+ +
Sbjct: 83 EGKYKDESDREHLESLPEMERETLLFERSQIMQKYQERKLFRARGRDMKEQQQRAKND-- 140
Query: 150 PLPSSRSARLAARSADRAAAKDDALNELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSPV 209
SR R + RS D ++A +L Q + R+ R S
Sbjct: 141 --EDSRKTRASTRSTHATGHSD-----IKASKLSQLKKQRARKNRHYS------------ 181
Query: 210 KRKAFTPAGLSSSSQSESESRSHSDDEGS-TGDGGMADSDDDGAPGSGRPTYD------- 261
+ + + DDEGS GD D++ P R TYD
Sbjct: 182 -------DNEDEDDEEDYREEDYKDDEGSEYGD------DEEYNPFDRRDTYDKREEVEW 228
Query: 262 --------------DIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNG--PIYR 305
D ++ I RS +AK+ P FE+ + GC+ RV +G K YR
Sbjct: 229 AEEEDEQDREPEISDFNKLRIGRSFVAKFCFYPGFEDAVKGCYGRVNVGTDKRTGKTSYR 288
Query: 306 LCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLR 365
+ + V +P Y + T +Y VT G + +QM SD E+E++++LR
Sbjct: 289 MVRIERVFLQKP---YNMGKFYTNQYFGVTQGKDRKV--FQMNYFSDGLFAEDEYQRYLR 343
Query: 366 EVERNSGRMPSKQDVLEK-KESIQKINTFVYSAAT---VKQMLQEKKSASSRPLNVAAEK 421
++ + PS + K KE + +NT + T V+ +Q K S N EK
Sbjct: 344 ALDNSQMIKPSLHSLSXKTKEVMDFVNTPLTDKTTDEVVRHRMQFNKKLSG--TNAVLEK 401
Query: 422 DRLRRELEVAQSRHDEVDMER-------IKKRLQELEASRDSKVKDAKAI-RLAEMNRKN 473
LR +L+ A+ ++E D+ + +KR+ E ++ D K + L NRK
Sbjct: 402 TVLREKLQYAKETNNEKDIAKYSAQLRNFEKRMSVYEKHHENDQSDIKKLGELTSKNRKL 461
Query: 474 RVENFKNASELKRVNTSL 491
+ N +NA + + T +
Sbjct: 462 NMSNIRNAEHVXKKKTVI 479
>gi|296425369|ref|XP_002842214.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638475|emb|CAZ86405.1| unnamed protein product [Tuber melanosporum]
Length = 567
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 132/259 (50%), Gaps = 16/259 (6%)
Query: 262 DIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPI-YRLCMVRNVDATEPDRS 320
D+ + I R+ LAK P FEE++ CFVRV + + G YRL V+ + +
Sbjct: 253 DVNKARIGRTGLAKLCDYPGFEEVVTDCFVRVSLFDRETGTTSYRLGWVKGFVSG---KY 309
Query: 321 YKLEN--RTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQ 378
Y + + R T ++L V+ G + + M +SDSP E E ++ +++E + MP
Sbjct: 310 YNMLDGKRRTDQHLRVSQGLAERS--FGMEFMSDSPITEAELNRFKKQMEFDHCAMPPLS 367
Query: 379 DVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEV 438
+ +K +++++ V + V +M++++ S +N+ ++ RLR E AQ + DE
Sbjct: 368 LLEKKSRELRELDNRVLTQDEVNEMIRKRNSDKVDTVNIVLKRGRLRDARESAQLKGDEA 427
Query: 439 DMERIKKRLQEL--EASRDSKVKDAKAIRLAEMNRKNRVENFKNASELKRVNTSLKAG-- 494
++ RI K LQ+L + + V ++ RLA++N NR KN +E+++ K
Sbjct: 428 EVARIDKELQDLGDQHGKSLVVPKSQMERLAKLNAVNRK---KNVAEIRKAEIEEKRAAR 484
Query: 495 -EAGYDPFSRRWTRSRNYY 512
A ++PF R T ++ +
Sbjct: 485 TAAVHNPFMRVKTVAKTRH 503
>gi|323305049|gb|EGA58802.1| Rtf1p [Saccharomyces cerevisiae FostersB]
Length = 493
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 148/331 (44%), Gaps = 56/331 (16%)
Query: 232 HSDDEGS-TGDGGMADSDDDGAPGSGRPTYD---------------------DIKEITIR 269
+ DDEGS GD D++ P R TYD D ++ I
Sbjct: 132 YKDDEGSEYGD------DEEYNPFDRRDTYDKREEVEWAEEEDEQDREPEISDFNKLRIG 185
Query: 270 RSKLAKWFMEPFFEELIVGCFVRVGIGRSKNG--PIYRLCMVRNVDATEPDRSYKLENRT 327
RS +AK+ P FE+ + GC+ RV +G K YR+ + V +P Y +
Sbjct: 186 RSFVAKFCFYPGFEDAVKGCYGRVNVGTDKRTGKTSYRMVRIERVFLQKP---YNMGKFY 242
Query: 328 TCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEK-KES 386
T +Y VT G + +QM SD +E++++LR ++ + PS + K KE
Sbjct: 243 TNQYFGVTQGKDRKV--FQMNYFSDGLFAXDEYQRYLRALDNSQMIKPSLHSLSNKTKEV 300
Query: 387 IQKINTFVYSAAT---VKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMER- 442
+ +NT + T V+ +Q K S N EK LR +L+ A+ ++E D+ +
Sbjct: 301 MDFVNTPLTDKTTDEVVRHRMQFNKKLSG--TNAVLEKTVLREKLQYAKETNNEKDIAKY 358
Query: 443 ------IKKRLQELEASRDSKVKDAKAI-RLAEMNRKNRVENFKNASELKRVNTSLKAGE 495
+KR+ E ++ D K + L NRK + N +NA +K+ +++ +
Sbjct: 359 SAQLRNFEKRMSVYEKHHENDQSDIKKLGELTSKNRKLNMSNIRNAEHVKKEDSN--NFD 416
Query: 496 AGYDPFSRRWTRSRNYYISKPGEEVTAEANG 526
+ DPFSR TR++ YY +E+ E N
Sbjct: 417 SKSDPFSRLKTRTKVYY-----QEIQKEENA 442
>gi|224005068|ref|XP_002296185.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|209586217|gb|ACI64902.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 955
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 158/326 (48%), Gaps = 60/326 (18%)
Query: 261 DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGR--SKNGPIYRLCMVRNVDATEPD 318
+D +++I R +L +W EPFFE+ I C+VR+GIGR YRLC + ++ T+ +
Sbjct: 547 EDYIKVSIPRRRLIRWCNEPFFEDAIKNCYVRLGIGRDNKTQKACYRLCKIVGIE-TKSE 605
Query: 319 RSYKLENR----TTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVE---RNS 371
S+ +++ TT K++ V++G ++A ++M VSD P ++ +++ +++ ++S
Sbjct: 606 YSFPADDKQKPVTTDKWIKVSFGKFTNA--FKMLTVSDHRPSADDVSKYVGQLKTERQHS 663
Query: 372 GRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRL------- 424
G + K ++ + +N + Y+ ++ +++EKK + + +N+ EK R+
Sbjct: 664 GLLTKKAANKRRRRQDELVNNYTYTKEDIEMLIKEKKKRNKKSMNIGMEKTRIAIIVQAA 723
Query: 425 RRELEVAQSRHDEVDMERIK-----------------KRLQELEASRDSKVKDAKAIRLA 467
R +E A+ R ++ +E+++ + L++ + + V++ + I +
Sbjct: 724 RDAVEEAEKRLEDAKVEQMEADDSMVSIAESNVTTATELLEDAKQHLQAMVEEQQRINVD 783
Query: 468 EMNRKNRVENFKNASELKRVNTSLK----------------------AGEAGYDPFSRRW 505
E RK+R++ +VN K E +DPF+RR
Sbjct: 784 EDERKSRLKGSSKVQNWVKVNQRAKLANQNADFAAYKEQIAKEKAEATAEPKFDPFARRK 843
Query: 506 TRSRNYYISKPGEEVTAEANGDKNGV 531
+ +N + + G + +++ D NGV
Sbjct: 844 VKPKNLW--EVGSKQSSDKGFDANGV 867
>gi|67536800|ref|XP_662174.1| hypothetical protein AN4570.2 [Aspergillus nidulans FGSC A4]
gi|40741723|gb|EAA60913.1| hypothetical protein AN4570.2 [Aspergillus nidulans FGSC A4]
gi|259482599|tpe|CBF77234.1| TPA: RNA polymerase II transcription elongation factor Rtf1p,
putative (AFU_orthologue; AFUA_2G01900) [Aspergillus
nidulans FGSC A4]
Length = 600
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 153/343 (44%), Gaps = 29/343 (8%)
Query: 262 DIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPI-YRLCMVRNVDATEPDRS 320
DI+ + R+ A+ P FE+ +VGC+VR+ +G + NG YRL M+ + + +
Sbjct: 271 DIQRARVGRTNFAQVCFYPGFEDTMVGCYVRLNVGPNPNGVNEYRLAMITEI---KEGKK 327
Query: 321 YKLE-----NRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMP 375
Y LE TT +Y + G + A + SDSP E EF +W + + +MP
Sbjct: 328 YALEGANGRTFTTDQYAVLAHGKTTRA--FPFVACSDSPFTEAEFNRWRQVMAVEDCKMP 385
Query: 376 SKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRH 435
+K + +K I ++ ++ + + L+++ ++ ++ + ++L++AQ
Sbjct: 386 TKSQLAKKVMDINRLINHQFTPEELNEKLRKQGLLDTK--TTFFKRVDIEKKLKIAQELG 443
Query: 436 DEVDMERIKKRLQELEASRDSKV--KDAKAIRLAEMNRKNRVENFKNA--------SELK 485
D+ ++ R++ L L +S + K + RLA++N +N+ N++N +
Sbjct: 444 DDDEVGRLQVELANLGSSAKPRTEKKLTEHERLAQLNLRNQKLNYENVRRAQIEERKASR 503
Query: 486 RVNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANGEEGATGEV 545
+ + GE +PF R TR++ +Y + E NG + P +
Sbjct: 504 KAAAAAARGEGSLNPFLRVKTRAKTHYDA--NESTPKSENGSPSVTPASSTPNPSTPARS 561
Query: 546 GMAATEAALEAAAGAGKLVDTNAPLDLGTESNMLHDFELDISL 588
+ ++ G GK+ N + E+ D ++DI +
Sbjct: 562 STPSNSQNKQSKGGGGKIRHRN----MDDENIAALDLDIDIEI 600
>gi|412991195|emb|CCO16040.1| predicted protein [Bathycoccus prasinos]
Length = 664
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 152/336 (45%), Gaps = 55/336 (16%)
Query: 259 TYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPI-YRLCMVRNV----- 312
T D++ IT+ RSKL KW EPF+E + G FVRV IG KN YRLC + +
Sbjct: 226 TAKDVRAITLPRSKLEKWISEPFYESAVEGAFVRVNIGLDKNKESRYRLCQIAGIADGSY 285
Query: 313 ---DATEPDRSYKLEN-----RTTCKYLNVTWG-----------------------NESS 341
T ++Y+ + ++T K+L + WG +ES+
Sbjct: 286 QGTTQTYSLKAYEYNDGTNAKKSTKKWLILRWGSHEKTFRISETSNRVDDAFARANDESN 345
Query: 342 AARWQMAMVSDSPP---LEEEFKQWLREVERNSGR-MPSKQ--DVLEKKESIQKINTFVY 395
A +++ D EF +W V++ + + +PS D++ KK + + + Y
Sbjct: 346 ATVGVGSLILDHDDERFKNSEFGKWYEHVKKTAKKYLPSVDDCDIISKK--LTGADEYRY 403
Query: 396 SAATVKQMLQ-EKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKRLQELEASR 454
+A V++ML+ K+ N EK++++ +L A+ D E++++ ++EL
Sbjct: 404 TAEDVQKMLELNKQKRGGVSTNFIFEKEQMKMQLAKAREEGDVEQQEKLEEAIKELNEKI 463
Query: 455 DSKV--KDAKAIRLAEMNRKNRVENFKNASE-----LKRVNTSLKAGEAGYDPFSRRWTR 507
++K+ + +A++N+KN N S+ +K+V E DPFSRR TR
Sbjct: 464 ENKINKRGGNQKVMADINKKNEFSNAIKLSQAAVKHIKKVKEGKDISED--DPFSRRPTR 521
Query: 508 SRNYYISKPGEEVTAEANGDKNGVPGGANGEEGATG 543
Y+ K E A++ +K N E A G
Sbjct: 522 VTTYWSMKTDGENNAKSAAEKAAKMAEMNAETAAAG 557
>gi|367013860|ref|XP_003681430.1| hypothetical protein TDEL_0D06350 [Torulaspora delbrueckii]
gi|359749090|emb|CCE92219.1| hypothetical protein TDEL_0D06350 [Torulaspora delbrueckii]
Length = 565
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 118/455 (25%), Positives = 194/455 (42%), Gaps = 56/455 (12%)
Query: 93 EGDSSNESDDDNHGQMTELEREMMIFERD---DKKVDKNL-RDKFRSRREERSTRSTKET 148
EG +++D + + E+ERE ++FER K D+ L R++ R+ +E++ R +E
Sbjct: 93 EGKYKDDNDRAHLEGLPEMERETLLFERSQIMQKYHDRRLFRERGRNMKEQQKNRQLREG 152
Query: 149 PPLPSSRSARLAARSADRAAAKDDALNELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSP 208
SS A +D A+K L++LR KQ++ + HR RD R
Sbjct: 153 NKTRSSARTTHATGHSDLKASK---LSQLR----KQREQKGHRANRD--RDFEEEEEEEE 203
Query: 209 VKRKAFTPAGLSSSSQSESESRSHSDDEGSTGDGGMADSDDDGAPGSGRPTYDDIKEITI 268
+ + +SH D G D D A + D +I I
Sbjct: 204 DRYEGSEYEDEDEEDYDPYNRKSHRDARKGRRSGMGRDQLDREADIT------DFNKIKI 257
Query: 269 RRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNG--PIYRLCMVRNVDATEPDRSYKLENR 326
RS +AK+ P F +++ G + RV +G K YR+ + V +P Y + N
Sbjct: 258 GRSFVAKFCFYPGFNDVVKGHYGRVNVGVDKRSGQTQYRMVKIEKVFFQKP---YNMGNF 314
Query: 327 TTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKES 386
T +Y VT G + +QM SD + E+ ++LR ++ G +K +
Sbjct: 315 FTNQYFGVTQGKDRKV--FQMNFFSDGNFTQSEYDRYLRALD---GVHITKPSMYSLDNK 369
Query: 387 IQKINTFVYSAATVK--------QMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEV 438
+++N FV T K +ML KK + S N EK L+ +L AQ ++
Sbjct: 370 AKEMNAFVSQPLTDKLTDDIVRNRMLFNKKLSGS---NAVLEKTVLKEKLRYAQETGNDR 426
Query: 439 DMERIKKRLQEL----EASRDSKVKDAKAIR----LAEMNRKNRVENFKNASELKRVNTS 490
D+ + +L+ L A D I+ L NRK ++ +NA +K+ + +
Sbjct: 427 DIAKYSSQLRNLVKRMSAYEKHHETDQSGIKKLGALTSKNRKVNMDRIRNAEHIKKEDVN 486
Query: 491 LKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEAN 525
+A DPFSR TR++ YY +E+ E N
Sbjct: 487 F---DAKSDPFSRLKTRTKVYY-----QEIQKEEN 513
>gi|444319893|ref|XP_004180603.1| hypothetical protein TBLA_0E00220 [Tetrapisispora blattae CBS 6284]
gi|387513646|emb|CCH61084.1| hypothetical protein TBLA_0E00220 [Tetrapisispora blattae CBS 6284]
Length = 570
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 108/486 (22%), Positives = 196/486 (40%), Gaps = 25/486 (5%)
Query: 93 EGDSSNESDDDNHGQMTELEREMMIFERDDKKVDKNLRDKFRSRREERSTRSTKETPPLP 152
EG +E D + M E+ERE ++FER R FR R ++ + +
Sbjct: 85 EGKYKDEDDREKIESMPEMERETLLFERSQIMQKYQERKMFRERSRKQMSLNNNSNLTGQ 144
Query: 153 SSRSARLAARSADRAAAKDDALNELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSPVKRK 212
+R++ + + AK L++L+ +R ++ +++ D + K
Sbjct: 145 KTRTSTRVTHTTGLSDAKSSKLSQLKRQRERRNKGQSNYSDEDEYEDEYEDDLEQEYKSS 204
Query: 213 AFTPAGLSSSSQSESESRSHSDDEGSTGDGGMADSDDD--GAPGSGRPT-YDDIKEITIR 269
++ + E + + G D DDD A R + D +I I
Sbjct: 205 GSDYDENEAAEEEEDDYDLYGSKTKYNHRGSEEDDDDDVKWAEDIDRESNVQDFNKIKIG 264
Query: 270 RSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRSYKLENRTTC 329
RS K+ P F +++ C+ +V + ++ P+YR+ + V + R + + T
Sbjct: 265 RSFAFKFCFYPDFNDIVKNCYAKVNVSDDRHKPVYRMVKIEKVFLDK--RPHDMGKFFTN 322
Query: 330 KYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKESIQK 389
+ VT GN + M SDSP EF +++R +E + PS + K + I
Sbjct: 323 QCFGVTQGNNRKV--YSMKYFSDSPITHAEFDRYIRTLEHDHITRPSVYAINNKFKEITA 380
Query: 390 INTFVYSAATVKQMLQEKKSASSRP--LNVAAEKDRLRRELEVAQSRHDEVDMER----- 442
T + Q+++ + + + N EK LR +L+ A+ +E D+ +
Sbjct: 381 FTTEPLTDKLTDQIVRNRMRFNKKLSGTNAVLEKTVLRGKLQFAKETGNERDVTKYSAQL 440
Query: 443 --IKKRLQELEASRDSKVKDAKAIRLAEMNRKNRVENFKNASELKRVNTSLKAGEAGYDP 500
++KRL E ++ AK +L ++ +NR N A ++ L +A DP
Sbjct: 441 RNLEKRLSLYEKHHENDQTGAK--KLGQLTSRNRKLNMDKARNVEHKKVELAGFDAKADP 498
Query: 501 FSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANGEEGATGEVGMAATE--AALEAAA 558
FSR TR++ YY +E+ E N + EE A + + A +
Sbjct: 499 FSRLKTRTKIYY-----QEIQKEENEKAQELAHKKQLEEDAEAKAQSEKEQLLAEFKCLG 553
Query: 559 GAGKLV 564
G K+V
Sbjct: 554 GLEKMV 559
>gi|255717581|ref|XP_002555071.1| KLTH0G00726p [Lachancea thermotolerans]
gi|238936455|emb|CAR24634.1| KLTH0G00726p [Lachancea thermotolerans CBS 6340]
Length = 561
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 132/298 (44%), Gaps = 42/298 (14%)
Query: 246 DSDDDGAPGSGRPTYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNG--PI 303
D D D P G D I I RS +AK+ P F ++I GC+ RV +G K +
Sbjct: 236 DEDLDREPELG-----DFNRIKIGRSFVAKFCFYPEFNDMIKGCYGRVNVGVDKRSGQTL 290
Query: 304 YRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQW 363
YR+ + V +P Y + T +Y VT G +QM SD + EF+++
Sbjct: 291 YRMVKIEKVFLQKP---YNMGKFFTNQYFGVTQGKNRKV--FQMNFFSDGAITQPEFERY 345
Query: 364 LREVERNSGRMPSKQDVLEKKESIQKINTFVYSAATVK--------QMLQEKKSASSRPL 415
LR +E + PS + K +IN+FV T K +M+ KK + +
Sbjct: 346 LRSLETSEINKPSLYIINNKS---NEINSFVSQPVTSKLTDELVRNRMIFNKKLSGT--- 399
Query: 416 NVAAEKDRLRRELEVAQSRHDEVDMERIKKRLQELEASRDSKVK-----DAKAIRLAEMN 470
N EK L+ +L+ A+ E D+ + +L+ LE S K A + +L +
Sbjct: 400 NAVLEKTILKDKLQYAKESGSERDVAKYSSQLRNLEKRLSSYEKHHENDQAGSKKLGALT 459
Query: 471 RKNRVENF---KNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEAN 525
KNR N KN K+ +T +A DPFSR TR++ YY +E+ E N
Sbjct: 460 SKNRRVNLDKGKNVEVTKKEDTPF---DAKTDPFSRLKTRTKIYY-----QEIQREEN 509
>gi|77022518|ref|XP_888703.1| hypothetical protein CaO19_7047 [Candida albicans SC5314]
gi|76573516|dbj|BAE44600.1| hypothetical protein [Candida albicans]
Length = 568
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 106/437 (24%), Positives = 201/437 (45%), Gaps = 32/437 (7%)
Query: 93 EGDSSNESDDDNHGQMTELEREMMIFERDDKKVDKNLRDKFRSRREERSTRSTKET---- 148
EG +E+D + M E+ERE ++FER +++DK K+ R ++ + K
Sbjct: 90 EGKYKDEADREALDNMDEMEREQILFERM-QEMDKYRERKYLQERMKQQQQQQKNVVGRI 148
Query: 149 PPLPSSRSARLAARSADRAAAKDDALNELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSP 208
P SS ++ + AK D L ELR KQ+ + R+ R + GS
Sbjct: 149 EPTRSSGRSKTGLK-----PAKKDKLTELR----KQRAQHSKRKSRREADYAEGSEDEED 199
Query: 209 VKRKAFTPAGLSSSSQSESESRSHSDDEGSTGDGGMADSDDDGAPGSGRPTYDDIKEITI 268
K + E + D +G+ GG + + + +DI I +
Sbjct: 200 EDDKEPEEEEEEDDDEEGFEEDYYDDYDGTVAWGGPSKVKKKRSTELAK--LEDINRIKV 257
Query: 269 RRSKLAKWFMEPFFEELIVGCF--VRVGIGRSKNGPIYRLCMVRNVDATEPDRSYKLENR 326
R+ L ++ FE+ IV F + +G+ RS PIYR+ + +V + P+R+YKL +
Sbjct: 258 GRTILTQYCFHSGFEDTIVDTFGKINLGMDRSTRQPIYRMVKIIDV-KSRPERAYKLGHS 316
Query: 327 TTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKES 386
+L V+ N+ M++ SDSP ++EF ++L+E+ + + DV K +
Sbjct: 317 NFDIFLTVSQ-NKDQKRDSPMSIFSDSPINQDEFDRYLKELNKTDEMIEFLDDVNSKFDE 375
Query: 387 IQKINTFVYSAATVKQMLQEKKSASSRPLNVAA-----EKDRLRRELEVAQSRHDEVDME 441
+ K + + + M+ K+ + N++ K L L++A+ + + ++
Sbjct: 376 LTKFYSKGLTDKDINDMIARKQKIQEKKGNISMYDAVNRKTNLLDRLKIAKQQGNLEKVQ 435
Query: 442 RIKKRLQELEASRDSKVKD---AKAIR-LAEMNRKNRVENFKNA--SELKRVNTSLKAGE 495
I ++L++++ +S+ + +K++ + +N +NR N N +E+K +T+ +
Sbjct: 436 EIIEKLKDIDEILESQTSNQPTSKSLNTMTLVNERNRKLNSTNIRKAEIKFKSTAAQQQS 495
Query: 496 AGYDPFSRRWTRSRNYY 512
G DPFSR T +R +Y
Sbjct: 496 DG-DPFSRLKTATRMFY 511
>gi|366993385|ref|XP_003676457.1| hypothetical protein NCAS_0E00260 [Naumovozyma castellii CBS 4309]
gi|342302324|emb|CCC70096.1| hypothetical protein NCAS_0E00260 [Naumovozyma castellii CBS 4309]
Length = 558
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 128/283 (45%), Gaps = 37/283 (13%)
Query: 261 DDIKEITIRRSKLAKWFMEPFFEELIVGCF--VRVGIGRSKNGPIYRLCMVRNVDATEPD 318
DD ++ I RS +AK+ P F ELI GC+ V VG R YR+ + + +P
Sbjct: 243 DDFNKVKIGRSFVAKYCFYPGFNELIKGCYGKVNVGTDRRTGTTSYRMVKIEKIFLQKP- 301
Query: 319 RSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQ 378
Y++ T +Y VT G S+ +QM SD +EF++++R ++ + PS
Sbjct: 302 --YRMGEFFTNQYFGVTQG--SNRKVFQMNFFSDGLFTPDEFERYVRSLDTSHITKPS-- 355
Query: 379 DVLEKKESIQKINTFVYSAATVK--------QMLQEKKSASSRPLNVAAEKDRLRRELEV 430
+ K ++I +F+ T + +ML KK + + N EK LR +L
Sbjct: 356 -IYTLKNKAKEIQSFISEPLTEQLMDTIVRNRMLFNKKLSGT---NAVLEKTVLRDKLRY 411
Query: 431 AQSRHDEVDMERIKKRLQELEA--------SRDSKVKDAKAIRLAEMNRKNRVENFKNAS 482
AQ ++E D+ + +L+ LE + +V K L NRK ++ KN
Sbjct: 412 AQENNNERDVAKYSSQLRNLEKRLSVYEKHHENDQVGSNKLGALTSKNRKVNMDKIKNTG 471
Query: 483 ELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEAN 525
K+ ++ DPFSR TR++ YY +EV E N
Sbjct: 472 HEKKEEIGF---DSKSDPFSRLKTRTKIYY-----QEVQQEEN 506
>gi|212536742|ref|XP_002148527.1| RNA polymerase II transcription elongation factor Rtf1p, putative
[Talaromyces marneffei ATCC 18224]
gi|210070926|gb|EEA25016.1| RNA polymerase II transcription elongation factor Rtf1p, putative
[Talaromyces marneffei ATCC 18224]
Length = 648
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 149/343 (43%), Gaps = 52/343 (15%)
Query: 218 GLSSSSQSESESRSHSDDEGSTGDGGMADSDDDGAPGSGRPTYDDIKEITIRRSKLAKWF 277
G S +E ES + +D+ D D P T DI+ + + RS A
Sbjct: 263 GAYSDVDAEGESEAEYEDKARRTPPKQPDIPKDDPPA----TLKDIQRVRVGRSNFASVC 318
Query: 278 MEPFFEELIVGCFVRVGIGRSKNGPI--YRLCMVRNVDATEPDRSYKLE---NRTTCKYL 332
P F + CF RV IG +++ + YR+C+++N P Y +E RT
Sbjct: 319 FHPTFSTSLTNCFTRVNIGPNRDTGLNEYRICIIKNFTKGRP---YAIEGANGRTYVTDQ 375
Query: 333 NVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKESIQKINT 392
+ + + SDSP E EF +W + + ++P+K + K I +
Sbjct: 376 YAVLAHGKAEREFPFIQCSDSPFTETEFNRWRQTMVVEDCKVPTKSMLAAKVVDINNLIN 435
Query: 393 FVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELE------VAQSRHDEVDMERIKKR 446
+ ++ +++ L+++ + + A EK R ELE +AQ DEV ++ +
Sbjct: 436 YKFTPEELEEKLRKQGA------DNANEKLLKRFELERKLNEAIAQGNDDEV--ANLQAQ 487
Query: 447 LQE-----------LEASRDSKVKDAKAIRLAEMNRKNRVENFKNAS----ELKRVN--- 488
L + L R K + + RLAE+NR+N+ N +N E +R+N
Sbjct: 488 LAKETTSKLAFNGSLHKPRPEKQQTPEQ-RLAELNRRNQKLNSENVRRAQLEERRMNRKN 546
Query: 489 -TSLKAGEAGYDPFSRRWTRSRNYY------ISKPGEEVTAEA 524
++ GEA DPF+R TR++ Y+ S P +E TA+A
Sbjct: 547 AAAVARGEATADPFARVKTRAKTYHDVNSGVNSTPNKENTADA 589
>gi|149235530|ref|XP_001523643.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146452622|gb|EDK46878.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 612
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 107/452 (23%), Positives = 199/452 (44%), Gaps = 52/452 (11%)
Query: 93 EGDSSNESDDDNHGQMTELEREMMIFERDDKKVDKNLRDKFRSRREERSTRSTKETPPL- 151
+G +E+D D M E++RE ++FER +++DK +F +R ++ + ++
Sbjct: 123 DGKYKDEADRDELEAMDEMKREEILFER-SQEMDKYNERRFLQQRIKKQQQQQQQQQQQQ 181
Query: 152 --------------PSSRSARLAARSADRAAAKDDALNELRAKRLKQQDPEAHRRLRDAS 197
SSR+ + ARS K++ L+EL+ +R E H R R +
Sbjct: 182 QQQQQLNRSDEKLRTSSRNKTVGARS-----HKENKLSELKKQR------EKHSRKRTRA 230
Query: 198 RGGSGSRVLSPVKRKAFTPAGLSSSSQSESESRSHSDDEGSTGDGGMADSDDDGAPGSGR 257
+ + ++ + ++G GG++ + G+
Sbjct: 231 QDDYDDDDAEEDSDDSGLGEEELLGEEAYEDDEFDEFNKGGVSWGGVSKTKRKKLTEPGK 290
Query: 258 PTYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIG--RSKNGPIYRLCMVRNVDAT 315
Y+DI I++ RS LA++ P F+ +++G + +V + R YR+ + ++ A
Sbjct: 291 --YEDILRISMTRSVLAQYCYHPNFQNVMIGTYAKVAVSFDRHTGRQFYRMVKIEDIRA- 347
Query: 316 EPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMP 375
P++ +++ N Y V+ E + M+ SDS EE+ ++L E+ + +
Sbjct: 348 RPEKPFRIGNSKYDMYFLVSQNREQKMP-FPMSTFSDSIITREEYDKYLGELAKTGESID 406
Query: 376 SKQDVLEKKESIQKINTFVYSAAT---------VKQMLQEKKSASSRPLNVAAEKDRLRR 426
D+ KE + +++ F + T KQ +Q+KK A + V A K RL
Sbjct: 407 LLDDI---KEKVLELSKFYKTGITDKDINERIARKQQMQQKKGAYTAFEAVQA-KSRLME 462
Query: 427 ELEVAQSRHDEVDMERIKKRLQELEASRDSKV----KDAKAIRLAEMNRKNRVENFKNA- 481
EL++ + R D +RI L+ ++ D K ++ +A++N +NR N N
Sbjct: 463 ELKIFKQRGDLEGTQRIINELKHIDEILDQKTLSSTSQSQIQSIAKVNERNRKLNSTNIR 522
Query: 482 -SELKRVNTSLKAGEAGYDPFSRRWTRSRNYY 512
+ELK + A G DPFSR T +R +Y
Sbjct: 523 KAELKFKTDASTASFDGGDPFSRLKTNTRMFY 554
>gi|365990611|ref|XP_003672135.1| hypothetical protein NDAI_0I03240 [Naumovozyma dairenensis CBS 421]
gi|343770909|emb|CCD26892.1| hypothetical protein NDAI_0I03240 [Naumovozyma dairenensis CBS 421]
Length = 563
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 114/456 (25%), Positives = 187/456 (41%), Gaps = 50/456 (10%)
Query: 93 EGDSSNESDDDNHGQMTELEREMMIFERDDKKVDKNLRDKFRSRREERSTRSTKETPPLP 152
E +E D ++ + E+ERE ++FER R FR R +R+ + +E L
Sbjct: 81 ENKYKDEDDREHLESLPEMERETLLFERSQVMRKYQERKLFRER--QRNIKEQQERNELE 138
Query: 153 SSRSARLAARSADRAAAKDDALNELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSPVKRK 212
++ A A D L+A +L Q + R+ RD
Sbjct: 139 EEGKKTRSSTRATHATGHSD----LKASKLSQLKKQRERKTRDQDYNDVEDEDDLDDYAP 194
Query: 213 AFTPAGLSSSSQSESESRSHSDDEGSTGDGGMADSDDDGAPGSGRPT-----YDDIKEIT 267
S + E E + +T D D D + T DD ++
Sbjct: 195 DDNYKHEDSEYEEEGEEDEEDYNPYATRKS--YDMDKDEVEWAEEQTDREAELDDFNKVK 252
Query: 268 IRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPI--YRLCMVRNVDATEPDRSYKLEN 325
+ RS +AK+ P F +L+ GC+ RV +G + I YR+ + V P Y++ +
Sbjct: 253 VGRSFIAKYCFYPGFSDLLKGCYGRVNVGTDRRTGISSYRMVKIEKVFLKGP---YRMGD 309
Query: 326 RTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKE 385
T +YL VT G++ QM + SD EF ++ R +E + PS + K +
Sbjct: 310 FFTNQYLGVTQGHDRKV--LQMNIFSDGLFTSAEFDRYTRALENSHLTKPSIHVLRGKSK 367
Query: 386 SIQKINTFVYSAATVK--------QMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDE 437
IQ FV T K +M+ KK + + N EK L+ +L A+ ++E
Sbjct: 368 EIQ---AFVSEPLTAKMTDAIVRNRMMFNKKLSGT---NAVLEKTVLKDKLRYARENNNE 421
Query: 438 VDMERIKKRLQELEA--------SRDSKVKDAKAIRLAEMNRKNRVENFKNASELKRVNT 489
D+ + +L+ LE + ++ K L NRK ++ +NA +K+ +
Sbjct: 422 RDVAKYSSQLRNLEKRMSVYEKHHENDQLGMNKLGALTSKNRKVNMDKIRNAEHIKKEDH 481
Query: 490 SLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEAN 525
L ++ DPFSR TR++ YY +EV E N
Sbjct: 482 GL---DSKSDPFSRLKTRTKIYY-----QEVQKEEN 509
>gi|353238297|emb|CCA70248.1| hypothetical protein PIIN_04187 [Piriformospora indica DSM 11827]
Length = 523
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 100/192 (52%), Gaps = 6/192 (3%)
Query: 259 TYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPD 318
T D+ + + R++LAK +M+P+FEE + G +VR IG ++ +YR+C ++++ +
Sbjct: 207 TVQDLGRLQLTRTQLAKEYMKPWFEEYVTGAWVRYLIGSNEGKAVYRICEIKSI-GSRTV 265
Query: 319 RSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQ 378
Y +EN T + L + + S + M VS+S E EF + + ++ +P
Sbjct: 266 LPYTVENVTMNQQLELAFA--KSTRLFNMDKVSNSAFTEREFDRLVATCKQERCPLPKPS 323
Query: 379 DVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVA---AEKDRLRRELEVAQSRH 435
+ EK++ ++ + A V M+ +++ + ++ + AE R+R+EL A +R
Sbjct: 324 QIQEKRQGMKACEARNLTEADVAAMIARRRTINPNEVSFSQRIAEGSRIRQELNAALARS 383
Query: 436 DEVDMERIKKRL 447
D ++ R++ L
Sbjct: 384 DNAEVTRLRAEL 395
>gi|449545910|gb|EMD36880.1| hypothetical protein CERSUDRAFT_114800 [Ceriporiopsis subvermispora
B]
Length = 539
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 110/434 (25%), Positives = 194/434 (44%), Gaps = 61/434 (14%)
Query: 65 KKRLDPAERDDDQGSQEEGDYDGGASEHEGDSSNESDDDNHGQMTELEREMMIFER---- 120
+++ D ++ D +Q EE D EG +E D + QM E+ERE +I +R
Sbjct: 38 RRKADVSDSDSEQPESEEDDV-ANPYPLEGKYVDEEDRNRLMQMPEIEREGIIEQRLEEM 96
Query: 121 ----DDKKVDKNLRDKFRSRREERSTRSTKETPPLPSSRSARLAARSAD-RAAAKDDA-- 173
D + +D+ L+ + R E S A+ A R R A K+
Sbjct: 97 QRIQDQRNLDQMLKAQSGGRGAEESV--------------AKAAKRQHTVRGATKEKTRK 142
Query: 174 LNELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSPVKRKAFTPAGLSSSSQSESESRSHS 233
L+EL+A+R K +D +R RD +SP + + +P + S E + +
Sbjct: 143 LDELKARR-KAKD--EKKRTRD----------MSPKREASSSPVDMDMSDDEEEDGQITK 189
Query: 234 DDEGSTGDGGMADSDD--DGAPGSGRPTYDDIKEITIRRSKLAKWFMEPFFEELIVGCFV 291
DE + + D + D +P +D + + + R L K P+F E G +V
Sbjct: 190 YDEQEEKERRILDKVNSRDDSPS----MLEDFENVRLSRELLVKHSAAPWFSEYCKGAWV 245
Query: 292 RVGIGRSK-NGPIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMV 350
R IG + N P+YR+C + V T +SY++ R + + + +G + R+ M
Sbjct: 246 RYLIGNDRENRPLYRMCEIVEVSQTGA-KSYEINGRVFNQEIELKYGG--AVKRFPMDKA 302
Query: 351 SDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKESIQKINTFVYSAATVKQML------ 404
S+ P E++ L+ + + +P+K+ + K+ I + + + V ML
Sbjct: 303 SNGPFTTTEYEHLLKTLTNDRAAVPTKRQLETKRAQIVDLPNRPMTESDVSAMLARKRNM 362
Query: 405 QEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKRLQELEASRDSKVKDAKAI 464
Q K+SA+S + E+ RL + +A R D ++++I +L EL +R ++ KA
Sbjct: 363 QGKQSAAS----MTMERSRLSQARTLALRRQDYDEVKQIDAQLAELTPARSD--REDKAD 416
Query: 465 RLAEMNRKNRVENF 478
LA++N +NR N
Sbjct: 417 ILAKVNERNRKANM 430
>gi|303315507|ref|XP_003067761.1| Plus-3 domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|240107431|gb|EER25616.1| Plus-3 domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|320035390|gb|EFW17331.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
Length = 622
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 156/361 (43%), Gaps = 43/361 (11%)
Query: 260 YDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNG--PIYRLCMVRNVDATEP 317
+ D + + RS A++ P FE+LI GC+ R+ +G + +YRLC++ D TE
Sbjct: 273 FRDFERARVSRSNFAQYCFYPNFEKLITGCYTRINVGPHPDTGELVYRLCLI--TDFTE- 329
Query: 318 DRSYKLENRTTCKYLNVTWG---NESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRM 374
R Y +E K++ + + S + SDSP E EF ++ + + +M
Sbjct: 330 GRPYAIEGPNGRKFVTKQYAVLEHGKSKKEFPYIFCSDSPFTESEFNRYRQTMVVEGFKM 389
Query: 375 PSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRL----RRELEV 430
P+K VL KK I I+ F+ + K+ L+EK N A RL RR+ V
Sbjct: 390 PTK-SVLNKK--IDDIH-FLINYRLSKEELEEKLKRQGTHDNKMAVFQRLQLQKRRQEAV 445
Query: 431 AQSRHDEVDMERIKKRLQELEASRDS---------KVKDAKAIRLAEMNRKNR---VENF 478
A DE + + L + + + + RLAE+NR+N+ EN
Sbjct: 446 ATG--DEAAIAECDAEIARLSGPKLAFGTSLVEPRSTEKTQQERLAELNRRNQKLNAENV 503
Query: 479 KNASELKRVNTSLKA-----GEAGYDPFSRRWTRSRNYYISK-----PGEEVTAEANGDK 528
+ A +R L+ GEA D F+R TR+R +Y + P ++ + E +G
Sbjct: 504 RKAQLEERRAARLQQAAVARGEALPDRFARVKTRARTHYDASGNRLLPKKQESGEVSGSV 563
Query: 529 NGVPGGANGEEGATGEVGMAATEAALEAAAGAGKLVDTNAP-LDLGTESNMLHDFELDIS 587
+ GAN AT G+ E G AP D +++ DFE+DI
Sbjct: 564 TPLTTGANTPNKATPPPGVNHANVTKETKPQTGIPKLRYAPNADEILAASL--DFEIDIE 621
Query: 588 L 588
+
Sbjct: 622 I 622
>gi|380482761|emb|CCF41037.1| plus-3 domain-containing protein [Colletotrichum higginsianum]
Length = 607
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 165/358 (46%), Gaps = 39/358 (10%)
Query: 258 PTYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGR-SKNGPI-YRLCMVRNVDAT 315
P D + + + +S+ A++ P FE ++GC+VR+ IG K G YR+ ++++
Sbjct: 259 PDIRDFERVRVGKSRFAEYCFNPGFETAMIGCYVRISIGPDPKTGQDEYRMARIQSITVG 318
Query: 316 EPDRSYKLE----NRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNS 371
+P Y + + T +Y+ G + +SD P E E+ ++ + ++
Sbjct: 319 KP---YAMTGPGGSFVTDQYVLAAHGKAERP--FPFIFLSDRPFSEREYNRYEKVIQSEG 373
Query: 372 GRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVA 431
+P KQ +L+K E I + + + + +Q +K+A + + ++RL +E+EVA
Sbjct: 374 LSLPKKQVLLDKIEDINALIAHHLTTTEIDERIQ-RKNALRKKFDPKL-RERLAQEIEVA 431
Query: 432 QSRHDEVDMERIKKRLQELEAS-----------RDSKVKDAKAIRLAEMNRKNRVENFKN 480
+ R + E ++++L +L+ + ++ RLA +NR+ R+EN +N
Sbjct: 432 RLRGNAAKAEELQEQLDDLKTNVLAFKTSLSDSSSKPSTTSQQDRLANINRQRRLENAEN 491
Query: 481 A--------SELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNG-V 531
+E ++++ +L+ GE + SRR R+R +I + D N
Sbjct: 492 VRRAQLKEKAEARKLDAALERGEDIKNDLSRRL-RTRAKFIHDANDSGKKPTGKDSNAST 550
Query: 532 PGGANGEEGATGEVGMAATEAALEAAAGAGKLVDT-NAPLDLGTESNMLHDFELDISL 588
P + GA E + A L+AA K + T + PL + +++ +LDI +
Sbjct: 551 PANGTPKSGAQ-EKNLLPNLAKLQAAKQEKKGIPTIHKPL---MDDDIIGALDLDIDI 604
>gi|242000814|ref|XP_002435050.1| caldesmon, putative [Ixodes scapularis]
gi|215498380|gb|EEC07874.1| caldesmon, putative [Ixodes scapularis]
Length = 623
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 98/400 (24%), Positives = 166/400 (41%), Gaps = 92/400 (23%)
Query: 261 DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRS 320
+++ I + R KL +W PFF + +VGCFVR+GIG +YR+ + D E +
Sbjct: 299 EELSRIRLSRHKLERWVHAPFFAKTVVGCFVRIGIGSHNGRAVYRVAQI--TDVVETAKV 356
Query: 321 YKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDV 380
Y L T K + +S AR +VS+ R S K V
Sbjct: 357 YALGRSRTNK---ACASSTASRARLPARVVSN----------------RTSPTRVCK--V 395
Query: 381 LEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQS--RHDEV 438
K + +Q+ + Y + V+ ++ EK+ P N A K +L ++ E+A+ H+E
Sbjct: 396 ARKAKDVQEALNYQYKESDVETIVTEKQRFRRNPHNYAVRKTQLMKQKEMAEQTGNHEEA 455
Query: 439 -----DMERIKKRLQELEASRDSKVKDAKAIRLAEMNRKNRVENFKNASELKR--VNTSL 491
++E++++R +EL+ R S + ++ +N +NR KN E++R + +
Sbjct: 456 LKLSGELEQLEERARELDKQRTSTISA-----ISYINERNR---LKNIVEIERAILEEAK 507
Query: 492 KAGEAGYDPFSRR------WTRSRNYYISKPGEEVTAEANGDKNGVPGGANGEEGATGEV 545
E DPF+RR T++R + KP +P EG V
Sbjct: 508 LNKEKADDPFTRRKCAPSLVTKTRTAEV-KPA------------AIPAAEEKAEGVV--V 552
Query: 546 GMAATEAALEAAAGAGKLVDTNAPLDLGTESNML--HDFELDISLNALKKFGGPQGVLAG 603
G A A L+ ++ +M HDF++ I L+ + P V+
Sbjct: 553 GTPAATAKLQEP-------------QHRSDQDMFSAHDFDIKIDLD-ISSSTTPSAVV-- 596
Query: 604 FMARKQRIEATVGCQVPENDGRRHALTLTVGDYKRRRGLL 643
R A VP+ +L + +YK+ RGL+
Sbjct: 597 ------RPSAGARPAVPKR-------SLNLEEYKKLRGLI 623
>gi|241957135|ref|XP_002421287.1| subunit of the RNA polymerase II-associated Paf1 complex, putative
[Candida dubliniensis CD36]
gi|223644631|emb|CAX40619.1| subunit of the RNA polymerase II-associated Paf1 complex, putative
[Candida dubliniensis CD36]
Length = 552
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 115/456 (25%), Positives = 206/456 (45%), Gaps = 45/456 (9%)
Query: 93 EGDSSNESDDDNHGQMTELEREMMIFERDDKKVDKNLRDKFRSRR--EERSTRSTKETPP 150
EG +E+D + M E+ERE ++F+R + DK+R R+ +ER +
Sbjct: 82 EGKYKDEADREALDNMDEMEREQILFDRMQE------MDKYRERKYLQERMKQQKNAGRI 135
Query: 151 LPSSRSARLAARSADRAAAKDDALNELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSPVK 210
P+ S R ++ + A KD L+ELR +R A +R + R V
Sbjct: 136 EPTRSSGR--TKTGIKPAKKD-KLSELRKQR-------AQHSIRKSRR--ETDYVEGSED 183
Query: 211 RKAFTPAGLSSSSQSESESRSHSDDEGSTGDGGMADSDDDGAPGSGRPTYDDIKEITIRR 270
+ + E + D +G+ GG + + S + +DI I + R
Sbjct: 184 EEPEEEDDDEEEEEEGFEDDYYDDYDGAVTWGGASKVKKKRSTESAK--LEDINRIKVGR 241
Query: 271 SKLAKWFMEPFFEELIVGCFVRVGIG--RSKNGPIYRLCMVRNVDATEPDRSYKLENRTT 328
+ L ++ FE+ I+ + R+ +G +S PIYR+ + +V + P+R+YKL +
Sbjct: 242 TILTQYCFHSGFEDTILDTYGRINLGMDKSTRQPIYRMVKIIDV-KSRPERAYKLGRSSF 300
Query: 329 CKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKESIQ 388
YL V+ N+ + M++ SDSP ++EF ++L+E+ + + DV K + +
Sbjct: 301 DIYLIVSQ-NKRQTKDFPMSIFSDSPITQDEFDRYLKELNKTDEVIDFLDDVNLKFDELT 359
Query: 389 KINTF------VYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMER 442
K + + + KQ +QEKK S + K L L++A+ + + ++
Sbjct: 360 KFYSKGLTDKDINAMIAKKQKIQEKKGNIS-MYDAVNRKTNLLDRLKIAKQQGNLEKVQE 418
Query: 443 IKKRLQELEASRDSKV------KDAKAIRLA-EMNRKNRVENFKNASELKRVNTSLKAGE 495
I K+L+E++ +S+ + + L E NRK N + A E+K T+ +
Sbjct: 419 IIKKLKEIDEILESQTSHQPTSESLNTMTLVNERNRKLNSTNIRKA-EIKFKTTAAQQQS 477
Query: 496 AGYDPFSRRWTRSRNYY---ISKPGEEVTAEANGDK 528
G DPFSR T +R +Y I++ E+ + N K
Sbjct: 478 DG-DPFSRLKTATRMFYQDLINQENEKALKDVNMQK 512
>gi|328863255|gb|EGG12355.1| hypothetical protein MELLADRAFT_76503 [Melampsora larici-populina
98AG31]
Length = 554
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 141/279 (50%), Gaps = 32/279 (11%)
Query: 259 TYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGP----IYRLCMVR-NVD 313
+ DDI+ +T+ R++ A+ FF + + G +VRV +G +K+ P YR+ V+ ++D
Sbjct: 230 SLDDIRSLTLTRTRAAELCCTDFFSDYVKGMWVRVSVGFAKDDPKREVKYRVAEVKCDID 289
Query: 314 ATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGR 373
+ Y++EN+ T K L V N S + VS+SP E E+ + E ++
Sbjct: 290 N---QKYYEVENQATTKTLQVVIANSSKVI--SLDRVSNSPIQENEWLFLVGECQKYKVP 344
Query: 374 MPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSR---PLNVA-AEKDRLRRELE 429
+P+K++V K SI K +V AT+ ++ KK+ ++ P + +E+ RL E +
Sbjct: 345 IPTKKEVSRKLNSITKYQDWVKDEATITLQVRAKKAMRAQGQGPTTLTISERLRLESERD 404
Query: 430 VAQSRHDEVDMERIKKRLQELEASRDSKVKDAKAIRLAEMNRKNRVENFKN-------AS 482
A +++D +ER+ LQ+ A V + + ++E+N +NR N + AS
Sbjct: 405 QAAAKNDTELVERLNSLLQQASAP----VVKSDTL-MSELNERNRRANREEIRRAEIAAS 459
Query: 483 ELKRVNTSLKAGEAGY----DPFSRRWTRSRNYYISKPG 517
EL+R + +KA + DP +R T R Y +K G
Sbjct: 460 ELRRQH--MKAHGTSHAVRPDPSARVKTNPRMTYETKSG 496
>gi|255731694|ref|XP_002550771.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240131780|gb|EER31339.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 549
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 135/281 (48%), Gaps = 21/281 (7%)
Query: 262 DIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSK--NGPIYRLCMVRNVDATEPDR 319
DI +IT ++ P FE+ IV F R+ IG K YR+ + V + DR
Sbjct: 232 DINKITFGWRTFQQYCFNPGFEDAIVDTFGRINIGPDKVTRKDSYRMVKIIGV-KLKKDR 290
Query: 320 SYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQD 379
+YKL YL V+ N + + ++ S+SP EEEF++++RE+ + + D
Sbjct: 291 TYKLGRTRLDIYLTVS-QNRTQTKDFPISFFSNSPITEEEFERYIRELTKTDEVIDLLDD 349
Query: 380 VLEKKESIQKINTFVYSAATVKQMLQEKKSASS-----RPLNVAAEKDRLRRELEVA--Q 432
V K E + S + M++ KK ++ R ++ +K RL EL++A Q
Sbjct: 350 VNSKFEEVDAFFKKGLSDQDINAMIERKKQLNADKSNIRAVDAVTQKTRLMDELQIAKQQ 409
Query: 433 SRHDEV-----DMERIKKRLQELEASRDSKVKDAKAIRLAEMNRKNRVENFKNASELKRV 487
++V D+++I+ L E EA+ + + K++ ++ E NRK N + A E+K
Sbjct: 410 GNFNKVSKILGDLKKIESIL-EHEAATNVQSKESIISKVNERNRKLNSTNIRKA-EIKNK 467
Query: 488 NTSLKAGEAGYDPFSRRWTRSRNYY---ISKPGEEVTAEAN 525
S + G DPFSR T ++ +Y I++ E+ E N
Sbjct: 468 TLSSQQQNDGGDPFSRLKTTTKMFYQDLINQENEKALQEVN 508
>gi|119191093|ref|XP_001246153.1| hypothetical protein CIMG_05594 [Coccidioides immitis RS]
gi|392868999|gb|EAS30358.2| hypothetical protein CIMG_05594 [Coccidioides immitis RS]
Length = 622
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 160/380 (42%), Gaps = 50/380 (13%)
Query: 248 DDDGAPGSGRPTYDD-------IKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKN 300
D+ A S PT DD + + RS A++ P FE+LI GC+ R+ +G +
Sbjct: 254 DEGAARRSTSPTKDDPPAEFRDFERARVSRSNFAQYCFYPNFEKLITGCYTRINVGPHPD 313
Query: 301 G--PIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWG---NESSAARWQMAMVSDSPP 355
+YRLC++ + P Y +E K++ + + S + SDSP
Sbjct: 314 TGELVYRLCLITDFAEGRP---YAIEGPNGRKFVTKQYAVLEHGKSKKEFPYIFCSDSPF 370
Query: 356 LEEEFKQWLREVERNSGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPL 415
E EF ++ + + +MP+K VL KK I I+ F+ + K+ L+EK
Sbjct: 371 TESEFNRYRQTMVVEGFKMPTK-SVLNKK--IDDIH-FLINYRLSKEELEEKLKRQGTHD 426
Query: 416 NVAAEKDRL----RRELEVAQSRHDEVDMERIKKRLQELEASRDS---------KVKDAK 462
N A RL RR+ VA DE + + L + + + +
Sbjct: 427 NKMAVFQRLQLQKRRQEAVATG--DEAAIAECDAEIARLSGPKLAFGTSLVEPRSTEKTQ 484
Query: 463 AIRLAEMNRKNR---VENFKNASELKRVNTSLKA-----GEAGYDPFSRRWTRSRNYYIS 514
RLAE+NR+N+ EN + A +R L+ GEA D F+R TR+R +Y +
Sbjct: 485 QERLAELNRRNQKLNAENVRKAQLEERRAARLQQAAVARGEALPDRFARVKTRARTHYDA 544
Query: 515 K-----PGEEVTAEANGDKNGVPGGANGEEGATGEVGMAATEAALEAAAGAGKLVDTNAP 569
P ++ + E +G + GAN AT G+ E G AP
Sbjct: 545 SGNRLLPKKQESGEVSGSVTPLTTGANTPNKATPPPGVNHANVTKETKPQTGIPKLRYAP 604
Query: 570 -LDLGTESNMLHDFELDISL 588
D +++ DFE+DI +
Sbjct: 605 NADEILAASL--DFEIDIEI 622
>gi|260788338|ref|XP_002589207.1| hypothetical protein BRAFLDRAFT_120771 [Branchiostoma floridae]
gi|229274382|gb|EEN45218.1| hypothetical protein BRAFLDRAFT_120771 [Branchiostoma floridae]
Length = 605
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/373 (22%), Positives = 152/373 (40%), Gaps = 61/373 (16%)
Query: 276 WFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVT 335
W PFF++ + GC+VR+GIG P+YR+ + +D E + Y+L + T K L +
Sbjct: 289 WCHMPFFKKAVAGCYVRIGIGNHNGKPVYRIAEI--IDVVETAKVYQLGSTRTNKGLRLR 346
Query: 336 WGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKESIQKINTFVY 395
+ R + VS+ E EF +W E+ ++P +V K IQ+ + +
Sbjct: 347 HATDERVFR--LEFVSNQDFTESEFLRWREEMMTKGFQLPFMDEVDSKYNDIQRALKYDF 404
Query: 396 SAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKRLQELEASRD 455
++ +++EK+ P N A +K L +E E+A++ D D ++
Sbjct: 405 KEDDIEAIVKEKERFQKSPYNFAMKKTALMKEKEMAEATGD-TDKAKV------------ 451
Query: 456 SKVKDAKAIRLAEMNRKNRVENFKNASELKRV---NTSLKAGEAGYDPFSRRWTRSRNYY 512
+ D NR+ KN S ++ + +++ G DP
Sbjct: 452 --LTDKLEELEERAEELNRLRQ-KNISAIRLLCSGTSNITFSLQGRDP------------ 496
Query: 513 ISKPGEEVTAEANGDKNGVPGGANGEEGATGEVGMAATEAALEAAAGAGKLVDTNAPLDL 572
++A+ N + GG G +G ++ A E AG N P +
Sbjct: 497 ------AMSAKIVQRLNEIYGGDQGLQGPNEQLQEMPQLAKSEVDGPAG---TENKPGEG 547
Query: 573 GTESNML--HDFELDISLNALKKFGGPQGVLAGFMARKQRIEATVGCQVPENDGRRHALT 630
++ HDF++ I L+ +K P I T G P++ + +L
Sbjct: 548 DHSEDLFSAHDFDIKIDLDLPEKATRP-------------INVTKGVGPPKDGAPKRSLN 594
Query: 631 LTVGDYKRRRGLL 643
L +YK++RGL+
Sbjct: 595 LE--EYKKKRGLI 605
>gi|403217320|emb|CCK71814.1| hypothetical protein KNAG_0I00230 [Kazachstania naganishii CBS
8797]
Length = 571
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 132/282 (46%), Gaps = 34/282 (12%)
Query: 262 DIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNG--PIYRLCMVRNVDATEPDR 319
D ++ I RS +AK+ P F +L+ GC+ RV +G K +YR+ + V +P
Sbjct: 254 DFNKLRIGRSFVAKFCFYPGFNDLVNGCYGRVNVGVDKRSGQTLYRMVKIEKVFLQKP-- 311
Query: 320 SYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQD 379
Y + T +Y VT G + +QM SD + E++++LR +E + PS
Sbjct: 312 -YNMGKFYTNQYFGVTQGKDRKV--FQMNFFSDGHFTQNEYERYLRSLETANISRPSAH- 367
Query: 380 VLEKKESIQKINTFVYSAATVK--------QMLQEKKSASSRPLNVAAEKDRLRRELEVA 431
+L K ++I +F+ T K +ML KK + + N EK LR +L+ A
Sbjct: 368 ILSNKS--KEIVSFITEPLTEKLTDEIVRNRMLFNKKLSGT---NAVLEKTVLRSKLQYA 422
Query: 432 QSRHDEVDMERIKKRLQELEASRDSKVKDAK-----AIRLAEMNRKNRVENF---KNASE 483
+ ++E D+ + +L+ E ++ K + +L + KNR N KN
Sbjct: 423 RESNNERDVAKYSAQLRNFEKRMNNYEKHHENDHTGTKKLGALTSKNRKVNMGKTKNYDH 482
Query: 484 LKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEAN 525
K+ +++ ++ DPFSR TR++ YY +EV E N
Sbjct: 483 GKKEDSAGPTVDSKSDPFSRLKTRTKIYY-----QEVQKEEN 519
>gi|242796736|ref|XP_002482863.1| RNA polymerase II transcription elongation factor Rtf1p, putative
[Talaromyces stipitatus ATCC 10500]
gi|218719451|gb|EED18871.1| RNA polymerase II transcription elongation factor Rtf1p, putative
[Talaromyces stipitatus ATCC 10500]
Length = 647
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 135/311 (43%), Gaps = 51/311 (16%)
Query: 259 TYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIG--RSKNGPIYRLCMVRNVDATE 316
T+ DI+ + + RS A P F + CF RV IG R YR+C+++
Sbjct: 299 TFKDIQRVRVGRSNFASVCFHPTFVPSLTNCFARVNIGPNRDTGQNEYRVCIIKKFTKGR 358
Query: 317 PDRSYKLE---NRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGR 373
P Y LE RT + + + SDSP E EF +W + + +
Sbjct: 359 P---YALEGANGRTYVTDQYAVLAHGKAEREFPFIQCSDSPFTEAEFNRWRQTMVVEDCK 415
Query: 374 MPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELE---- 429
+P+K + K I + + ++ +++ L+++ + + A EK R ELE
Sbjct: 416 IPTKSMLAAKVVDINNLINYKFTPEELEEKLRKQGA------DNANEKLLRRFELERKLN 469
Query: 430 --VAQSRHDEVDMERIKKRLQE-----------LEASRDSKVKDAKAIRLAEMNRKNRVE 476
+AQ DEV I+ +L + +R K + + RLAE+NR+N+
Sbjct: 470 EAIAQGNDDEV--ASIQAQLAKETTSKLAFNGAFNKTRPEKQQTPEQ-RLAELNRRNQKL 526
Query: 477 NFKNAS----ELKRVNTSLKA----GEAGYDPFSRRWTRSRNYY------ISKPGEEVTA 522
N +N E +R+N + A GEA DPF+R TR++ Y+ S P +E T
Sbjct: 527 NSENVRRAQLEERRMNRKIAAAVARGEATADPFARVKTRAKTYHDVNASAHSVPAKE-TP 585
Query: 523 EANGDKNGVPG 533
NG NG P
Sbjct: 586 TDNG--NGTPA 594
>gi|302851302|ref|XP_002957175.1| hypothetical protein VOLCADRAFT_98246 [Volvox carteri f.
nagariensis]
gi|300257425|gb|EFJ41673.1| hypothetical protein VOLCADRAFT_98246 [Volvox carteri f.
nagariensis]
Length = 635
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 135/275 (49%), Gaps = 12/275 (4%)
Query: 247 SDDDGAPGSGRPTYDDIKEITIRRSKLAKWFMEPFFE-ELIVGCFVRVGIG---RSKNGP 302
SDD+ AP T +++ + R +L +WF +PFFE + + GC VR+ G R +G
Sbjct: 261 SDDEEAPEEA--TLEELLTCQVTRIQLEEWFTQPFFERDALSGCVVRMAYGPGMRDASGN 318
Query: 303 IYRLCMVRNV-DATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFK 361
+ M+ + D E R Y +R + ++ + R MAM + E E++
Sbjct: 319 THPGYMIMEITDIRESGRGYSFGSRGEITHKHLALRDGLGITR-VMAMANFD---EAEYE 374
Query: 362 QWLREVERNSGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEK 421
++ R R S ++++ ++ + +++A +K L+ K+++ + P+N AAEK
Sbjct: 375 RYKRHCGRASRAPITREEAAAAARKVEAATNYRWTSADLKLELERKRASRAAPVNPAAEK 434
Query: 422 DRLRRELEVAQSRHDEVDMERIKKRLQELEASRDSKVKDAKAIRLAEMNRKNRVENFKNA 481
L+R +E+A + + ++ ++++L LE+ ++ + +A + ++N++N+ N A
Sbjct: 435 AMLKRRMELAAAAGNMDEVAVLEEQLSSLESHLLNQNNNKRAFGMMDLNKRNKQHNLTVA 494
Query: 482 SELKRV-NTSLKAGEAGYDPFSRRWTRSRNYYISK 515
+ G G D FSRR T Y+ +K
Sbjct: 495 YKTSAAEEHGGNDGSGGADVFSRRATTLNIYWNTK 529
>gi|299116457|emb|CBN76175.1| conserved unknown protein (Partial) [Ectocarpus siliculosus]
Length = 517
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 122/268 (45%), Gaps = 34/268 (12%)
Query: 262 DIKEITIRRSKLAKWFMEPFFEELIVGCFVRV--GIGRSKNGPIYRLCMVRNVDATEPDR 319
DI + R L +W EP+FE+ + GCFVRV G+GRS +Y M V R
Sbjct: 242 DINRCRVPRDYLERWANEPYFEKAVQGCFVRVARGVGRSGE-RVY--VMAEIVGVGPYKR 298
Query: 320 SYKLENRTTCKYLNVTWGNESSAARWQ-MAMVSDSPPLEEEFKQWLREVERNSGRMPSKQ 378
YK+ N T K L ++ SS R Q M +VS+S E E+ +W GR +K
Sbjct: 299 KYKIGNSYTQKCLKIS--ASSSQVRDQCMDIVSNSRISEGEYTRW------KDGRKGAKV 350
Query: 379 DVLEKKESIQ---KINTFV----YSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELE-- 429
L E ++N V YSA V M+++++S NVA + +L LE
Sbjct: 351 PTLTVSECNARRVRMNKIVQGHRYSAEEVSAMVKQRQSEGVAFTNVALSRMKLDNSLEAA 410
Query: 430 VAQSRHDEVDMERIK-KRLQELEASRDSKVKDAKAIRLAEMNRKNRVENF---------K 479
VA+ R DE D R + +L E EA + + D+ A + +N +N+ N K
Sbjct: 411 VAEGREDEADFCREQLAKLDEREAQKKKSL-DSGAAGMRALNERNKTFNVHTDTHVGRKK 469
Query: 480 NASELKRVNTSLKAGEAGYDPFSRRWTR 507
+E K S E +DPF RR R
Sbjct: 470 RLAEAKAREASAAGDEGDFDPFKRRSCR 497
>gi|393244359|gb|EJD51871.1| plus-3-domain-containing protein [Auricularia delicata TFB-10046
SS5]
Length = 525
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 133/285 (46%), Gaps = 26/285 (9%)
Query: 216 PAGLSSSSQSESESRSHSDDEGSTGDGGMADSDD-------DGAPGSGRPTYDDIKEITI 268
P SSS ++ ++S S SDDE ++D D P G D+++I +
Sbjct: 155 PGSPSSSRKAHAQSDSSSDDEEGQYSRVEEENDRFDKQFGRDKEPPVG---IADLRKIQV 211
Query: 269 RRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRSYKLENRTT 328
RS + K+ P+FE+LI G +VR+ +G K +YR+C + E + Y +E
Sbjct: 212 TRSMIGKYIERPWFEKLIAGAWVRIMVGSEKGENVYRICEALKI--GEIIKPYSVEGNQV 269
Query: 329 CKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKESIQ 388
+ + + G + + M VS+ P ++EF + R ++PS++D+ K+ I+
Sbjct: 270 IESVELKHGQ--AIREFTMERVSNVPFTDKEFDRLTRTCALEKVKLPSRRDIERKQAEIK 327
Query: 389 KINTFVYSAATVKQMLQEK----KSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIK 444
++ + + A + L+ K + SRP + A E L + ++A R D + + ++
Sbjct: 328 RLTSQPRTNADIDYQLKRKAQIDRLLPSRPWDPAKEYAHLLKRHDLAFQRKDREETKNLQ 387
Query: 445 KRLQELEASRDSKVKDAKAIR--------LAEMNRKNRVENFKNA 481
L+E E + + K R +A +N++N++ N +N
Sbjct: 388 AALREFEEKHPNLKERYKRERESDDNEDLMARINKRNKLANEENV 432
>gi|392590321|gb|EIW79650.1| plus-3-domain-containing protein [Coniophora puteana RWD-64-598
SS2]
Length = 556
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 124/492 (25%), Positives = 217/492 (44%), Gaps = 80/492 (16%)
Query: 3 DLENLLLEAAGRTNSAGRNRHSASSSKRRREGSYS-GSDS--RDDDSDDNRGYGSRKPSG 59
D + LLE AG T R R S++ S ++ + + S GSD RD DS+D+
Sbjct: 7 DFSDELLELAGATEKKRRKRQSSNHSNKKAKSNVSMGSDESDRDVDSEDDL--------- 57
Query: 60 SQVPLKKRLDPAERDDDQGSQEEGDYDGGASEHEGDSSNESDDDNHGQMTELEREMMIFE 119
+ PL EG +E+D + +MTE+ERE ++
Sbjct: 58 NPFPL----------------------------EGKYVDEADRERLLEMTEIEREEILAS 89
Query: 120 RDD----KKVDKNLRDKFRSRREERSTRSTKETPPLPSSRSARLAARSADRAAAKDDALN 175
R + K+ KNL ++++ + + + + AAR A + K L+
Sbjct: 90 RMEQLQRKQDSKNLDALLKAQKA-----GADGSDSIVKAAKRQHAARGATKE--KSSKLD 142
Query: 176 ELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSPVKRKAFTPAGLSSSSQSESE---SRSH 232
EL+AKR + E +R +R SP + +P + +SS E + S+
Sbjct: 143 ELKAKRRAK---EQKKR----------TRTNSPKGDRDSSPMDMETSSGEEEDGQISKFE 189
Query: 233 SDDEGSTGDGGMADSDDDGAPGSGRPTYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVR 292
DD+ + D++ P T D+ I + R LA+ + P+FE+ + G +VR
Sbjct: 190 EDDDMLRKFSRKSKDDNNDEPI----TRYDLMAIRVSRDMLARHCLAPWFEDYVKGAWVR 245
Query: 293 VGIGRSKNG-PIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVS 351
IG K+G P+YR+C + + A + YK+ + + + + G A + M VS
Sbjct: 246 YLIGNEKDGQPVYRICEISGL-AMNLTKPYKINDTLIDRAIELKHGKSVRA--FNMDKVS 302
Query: 352 DSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSAS 411
+S E+E+ + + MP+++ + +KKE + ++ + + + + ML K S
Sbjct: 303 NSDFPEKEWDRLKYACLTDHVAMPTRRAIEKKKEQMARLVSQRMTDSDITAMLARKNQLS 362
Query: 412 SRPLNVAA---EKDRLRRELEVAQSRHDEVDMERIKKRLQELEASRDSKV--KDAKAIRL 466
S + AA E+ RL + +A R D V++ I +L L ++V +D A RL
Sbjct: 363 SGVQSAAAITMERSRLNQARTLALRRQDAVEVAEIDVKLAALPEVAATRVAEEDDLAARL 422
Query: 467 AEMNRKNRVENF 478
++N +NR N
Sbjct: 423 LKVNERNRKANM 434
>gi|310800177|gb|EFQ35070.1| plus-3 domain-containing protein [Glomerella graminicola M1.001]
Length = 612
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 157/340 (46%), Gaps = 36/340 (10%)
Query: 258 PTYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGR-SKNGPI-YRLCMVRNVDAT 315
P D + + + +S+ A++ P FE IVGC+VR+ IG K G YR+ ++ +
Sbjct: 264 PDIRDFERVRVGKSRFAEYCFNPGFEAAIVGCYVRISIGPDPKTGQDEYRMARIQAITVG 323
Query: 316 EPDRSYKLENR----TTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNS 371
+P Y + T +Y+ G + +SD P E E+ ++ + ++
Sbjct: 324 KP---YAMTGPGGAFVTDQYVLAAHGKAERP--FPFIFLSDRPFTEREYNRYEKVIQSEG 378
Query: 372 GRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVA 431
+P KQ +L K + I + + + + +Q +K+A + + ++RL +E+EVA
Sbjct: 379 LTLPKKQTLLNKIDDINALINHHLTTTEIDERIQ-RKNALRKKFDPKV-RERLAQEIEVA 436
Query: 432 QSRHDEVDMERIKKRLQELEAS--------RDSKVK---DAKAIRLAEMNRKNRVENFKN 480
+ + + E ++++L +L+ + D+ K ++ RLA +NR+ R+EN +N
Sbjct: 437 RLKGNTSKAEELQEQLDDLKTNVLAFKTSLSDTSSKPSTTSQQDRLANINRQRRLENAEN 496
Query: 481 A--------SELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNG-V 531
+E +++ +L+ GE + SRR R++ +I + + + D N
Sbjct: 497 VRRAQLKEKAEARKLEAALERGEDIKNDLSRRL-RTKAKFIHDANDAIKKPSGKDSNAST 555
Query: 532 PGGANGEEGATGEVGMAATEAALEAAAGAGKLVDT-NAPL 570
PG + GA E A L+AA K + T + PL
Sbjct: 556 PGNGTPKLGAQ-EKNWLPNLAKLQAANQEKKGIPTIHKPL 594
>gi|313246052|emb|CBY35015.1| unnamed protein product [Oikopleura dioica]
Length = 504
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 134/262 (51%), Gaps = 29/262 (11%)
Query: 261 DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGR-SKNGPIYRLCMVRNVDATEPDR 319
+++K + R +L +W P+F IVG +VRV IG ++G YR+ ++ D E +
Sbjct: 250 EELKPAKMSRFRLCQWMHMPWFRNTIVGTYVRVSIGLGDESGARYRIAEIK--DTGESSK 307
Query: 320 SYKLE-------NRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSG 372
+YKL+ T K L + GN A R M +S+S + EF W + ++
Sbjct: 308 TYKLDPGDPKATKIHTNKTLLLRIGNSDRAFR--MCFISNSDWSDTEFDFWKKHGLKSG- 364
Query: 373 RMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQ 432
+P+ D+ +K++ ++++ V + V+ M++EK + P+N A +K L + + A+
Sbjct: 365 -LPTVGDIEKKQKELERMKKHVITDREVETMVKEKAKHRTNPINFALQKTTLLKMRDAAE 423
Query: 433 SRHDEVDMERIKKRLQELE--ASRDSKVKDAKAIRLAEMNRKNRVENFKNASELKRVNTS 490
+ + ++ I+ +L+E+E A++ S+ + A + E+N ++R +++ + +
Sbjct: 424 TAGNIEEVASIQSKLEEIEKRANKLSRDRQAGIAGITEINERSR-------RKIRGMESV 476
Query: 491 LKAGEAGY------DPFSRRWT 506
+A A + DPF+RR T
Sbjct: 477 CEAEWAKFRNNDKVDPFTRRTT 498
>gi|397572396|gb|EJK48237.1| hypothetical protein THAOC_32985 [Thalassiosira oceanica]
Length = 1115
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 154/354 (43%), Gaps = 83/354 (23%)
Query: 260 YDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGR--SKNGPIYRLCMVRNVDATEP 317
+D ++ I R +L K EP+FE I +VR+G+GR P YRLC + V T
Sbjct: 702 LEDYHKVYIPRRRLMKLCNEPYFENAITNFYVRLGVGRDSKTQKPCYRLCKIVEV-VTRD 760
Query: 318 DRSY-KLENRT---TCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERN--S 371
+ S+ ++EN+ T K+L + +G + ++M VS+ P E+ K + +++ N +
Sbjct: 761 EYSFPQVENQPRVKTDKHLLLAFGQHTR--EYKMVQVSEKRPTAEDVKNLVGQLKTNRMN 818
Query: 372 GRMPSKQDVLE-KKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEV 430
M +K+ + +K+ +N +VY+ + + + E K +N+AAEK R+ E++V
Sbjct: 819 DEMLTKKGAAKLRKQHHNLVNNYVYTTEDIDRAVAEGKKLGKVSVNIAAEKTRV--EIQV 876
Query: 431 ---------AQSRHDEVDMERI------------------------KKRLQE-------- 449
A+ R + ++ER+ +KRLQE
Sbjct: 877 KGAEAAVADAKGRLQDAEVERMEADDAVVAMAEQKVEKAKEAVKEAEKRLQESIEEQNRL 936
Query: 450 --LEASRDSKVKDAKA--------IRLAEMNRKNRVENFKNASELKRVNTSLKAGEAGYD 499
++ R K+K +K R NR E FK ++ N + E +D
Sbjct: 937 AKMDEQRMRKIKGSKKNQDWVKVNQRAKLANRNADFEAFKKEQLARQANQA----EPKFD 992
Query: 500 PFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANGEEGATGEVGMAATEAA 553
P++RR + +N + E G K GGA+ GA G + EAA
Sbjct: 993 PYARRRVKPKNLW----------EVGGAKKSGVGGADEATGA----GSGSKEAA 1032
>gi|388580488|gb|EIM20802.1| plus-3-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 464
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 99/193 (51%), Gaps = 6/193 (3%)
Query: 262 DIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRSY 321
DI +++I R+ LA + PFFE+ + G FVR +G P YRLC V + R Y
Sbjct: 202 DIHKVSISRTMLADFCYAPFFEDFVKGTFVRYLLGERDGKPDYRLCEVVGL-GDSLTRPY 260
Query: 322 KLE-NRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDV 380
++ N T + L + G S M VS+S + EF +++ + R+P+++ +
Sbjct: 261 AIDGNTMTNQQLVLKQGRASKPC--NMDKVSNSRCTDREFDRFVAHAKYEKARLPTRKTI 318
Query: 381 LEKKESIQKINTFVYSAATVKQMLQEKKSASSRPL--NVAAEKDRLRRELEVAQSRHDEV 438
+ I++ +S A + LQ+K + L NVA EK L++ L++A++R D
Sbjct: 319 EMVRTQIEETRKRPWSEADINFKLQKKAAVMGGTLKKNVALEKAELQQRLQLARARRDVQ 378
Query: 439 DMERIKKRLQELE 451
+ E + ++L+ +E
Sbjct: 379 EAEYLFQKLEAME 391
>gi|313234839|emb|CBY24783.1| unnamed protein product [Oikopleura dioica]
Length = 504
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 134/262 (51%), Gaps = 29/262 (11%)
Query: 261 DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGR-SKNGPIYRLCMVRNVDATEPDR 319
+++K + R +L +W P+F IVG +VRV IG ++G YR+ ++ D E +
Sbjct: 250 EELKPAKMSRFRLCQWMHMPWFRNTIVGTYVRVSIGLGDESGARYRIAEIK--DTGESSK 307
Query: 320 SYKLE-------NRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSG 372
+YKL+ T K L + GN A R M +S+S + EF W + ++
Sbjct: 308 TYKLDPGDPKATKIHTNKTLLLRIGNSDRAFR--MCFISNSDWSDTEFDFWKKHGLKSG- 364
Query: 373 RMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQ 432
+P+ D+ +K++ ++++ V + V+ M++EK + P+N A +K L + + A+
Sbjct: 365 -LPTVGDIEKKQKELERMKKHVITDREVETMVKEKAKHRTNPINFALQKTTLLKMRDAAE 423
Query: 433 SRHDEVDMERIKKRLQELE--ASRDSKVKDAKAIRLAEMNRKNRVENFKNASELKRVNTS 490
+ + ++ I+ +L+E+E A++ S+ + A + E+N ++R +++ + +
Sbjct: 424 TAGNIEEVASIQSKLEEIEKRANKLSRDRQAGIAGITEINERSR-------RKIRGMESV 476
Query: 491 LKAGEAGY------DPFSRRWT 506
+A A + DPF+RR T
Sbjct: 477 CEAEWAKFRNNDKVDPFTRRTT 498
>gi|346976356|gb|EGY19808.1| RNA polymerase-associated protein RTF1 [Verticillium dahliae
VdLs.17]
Length = 610
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 136/308 (44%), Gaps = 42/308 (13%)
Query: 259 TYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGR-SKNGP-IYRLCMVRNVDATE 316
T D + I + RS+ A++ P FE+ I GC+VRV +G K G YRL ++ + +
Sbjct: 259 TIRDFERIRVGRSRFAQYCFNPGFEDAITGCYVRVSLGPDPKTGQDDYRLAKIKGIAVGK 318
Query: 317 PDRSYKLE----NRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSG 372
P Y L + T +Y+ G + + SD P E EF +++ ++ +
Sbjct: 319 P---YALNGPSGSFVTDQYVIAAHGK--AEKEFAFIFCSDKPVTEREFNRYVTTLQVDGM 373
Query: 373 RMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAE---KDRLRRELE 429
P Q +L K I IN FV + T ++ ++K A L + +DRLR E+E
Sbjct: 374 AFPKTQVLLNK---IDDINKFVERSLTSAEI--DEKVARKNELRKKFDPERRDRLRWEIE 428
Query: 430 VA------------QSRHDEVDMERIKKRLQELEASRDSKVKDAKAIRLAEMNRKNRVEN 477
A Q D++ R+ R L+A + + A+ RLA++NR+ R +N
Sbjct: 429 EATAAGHTRRIAELQEELDDLLSNRLAFRTT-LDAPKTTSTNAAQQDRLADINRERRRQN 487
Query: 478 --------FKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKN 529
K E ++ +++ GEA SRR R++ ++ + + + N
Sbjct: 488 AANVGKAQLKEKHEARKKEAAIERGEATDIDLSRR-IRTKTKFVHQ-NHQKAEDGAASGN 545
Query: 530 GVPGGANG 537
G P +G
Sbjct: 546 GTPASGSG 553
>gi|410083819|ref|XP_003959487.1| hypothetical protein KAFR_0J02880 [Kazachstania africana CBS 2517]
gi|372466078|emb|CCF60352.1| hypothetical protein KAFR_0J02880 [Kazachstania africana CBS 2517]
Length = 555
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 147/335 (43%), Gaps = 41/335 (12%)
Query: 261 DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNG--PIYRLCMVRNVDATEPD 318
+D ++ I RS +AK+ P F E++ GC+ RV +G K YR+ + + +P
Sbjct: 241 NDFNKLRIGRSFVAKFCFYPDFGEIVKGCYGRVNVGVDKRTGQTSYRMVKIERIFLQKP- 299
Query: 319 RSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQ 378
Y + T +Y VT G + +QM+ SD +E+++++R +E S +P K
Sbjct: 300 --YSMGKFFTNQYFGVTQGKDRKV--FQMSFFSDGLITPQEYERYIRSLE--SSHIP-KP 352
Query: 379 DVLEKKESIQKINTFVYSAATVK--------QMLQEKKSASSRPLNVAAEKDRLRRELEV 430
V K +++ +FV T K +M+ KK + + N EK L+ +L+
Sbjct: 353 TVYTLKSKSKELVSFVSEPLTEKLTNEIVRNRMVFNKKLSGT---NAVLEKTVLKEKLQY 409
Query: 431 AQSRHDEVDMER-------IKKRLQELEASRDSKVKDAKAI-RLAEMNRKNRVENFKNAS 482
A+ ++E D+ + +KR+ E ++ +K + L N+K ++ +NA
Sbjct: 410 ARETNNERDVAKYSAQLRNFEKRMNMYEKHHENDQTGSKKLGALTSKNKKVNMDKLRNAE 469
Query: 483 ELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANGEEG-- 540
+K+ + + DPFSR TR++ YY +E+ E N + EE
Sbjct: 470 HVKKEDLPIDKS----DPFSRLKTRTKIYY-----QEIQKEENERAKALAQQKKMEENEE 520
Query: 541 ATGEVGMAATEAALEAAAGAGKLVD-TNAPLDLGT 574
AT A G K++ N DLG
Sbjct: 521 ATKRKEKELLLAQFRRLGGLEKMISGLNIEFDLGI 555
>gi|301102985|ref|XP_002900579.1| RNA polymerase-associated protein RTF1 [Phytophthora infestans
T30-4]
gi|262101842|gb|EEY59894.1| RNA polymerase-associated protein RTF1 [Phytophthora infestans
T30-4]
Length = 760
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 108/424 (25%), Positives = 178/424 (41%), Gaps = 67/424 (15%)
Query: 108 MTELEREMMIFERDDKKVDKNLRDKFRSRREERSTRS--------TKETPPLPSSRSARL 159
+TE+E+E + E+ + K +N + + R ++ +E LPS R R
Sbjct: 171 LTEVEKEKRLLEKYEAKEQRNKERELKKRLAASQGKAEDGFLDEEGEEEGELPSRRGGR- 229
Query: 160 AARSADRAAAKDDALNELRAKRLKQQD--------------------------PEAHRRL 193
+R +DR + +AL+ L+A + + E RR
Sbjct: 230 -SRESDR---RKEALHNLKANKSSDKSRSILSNRFGDDDSSEEEGGSRSGRDLAEKRRRR 285
Query: 194 RDASRGGSGSRVLSPVKRKAFTPAGLSSSSQSESESRSHSDDEGSTGDGGMADSDDDGA- 252
R+ RGGSG R R S +S + + ST +AD ++ A
Sbjct: 286 RELQRGGSGRR------RSQDDDDYSDEDSDGRKPKKSKASNSTST---KLADEEELAAA 336
Query: 253 --PGSGRP-TYDDIKEITI-RRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCM 308
P P T+D + RR+ K F EPFF +L+ G +VR+ I +YR C
Sbjct: 337 IRPEENVPVTWDQANHYLLKRRTFFEKHFFEPFFAQLVRGVYVRIPIEMVDGEMVYRFCE 396
Query: 309 VRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVE 368
V NV + RSY TT + +G S W++ VS E EF W +
Sbjct: 397 VVNV--CKMARSYTFCGETTHTGIICAFG--KSKREWKLNGVSGHSLREREFLLWRAVMN 452
Query: 369 RNSGRMPSKQDV---LEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLR 425
+ P+ +V KKE + + Y+ A V M++ K++ +++ ++ RL
Sbjct: 453 KERLHFPTHGEVKRLFSKKERM--VTQHNYTDAEVDDMVRRKQAVGLSTVSLGVQRVRLE 510
Query: 426 RELEVAQSRHDEVDMERIKKRLQELEASRDSKVKDAK--AIRLAEMNRKNRVENFK---N 480
R+L AQ + +++RLQ+L A + + K +R+ E+NR+NR N + N
Sbjct: 511 RDLRAAQDMKNFEKAVVLEERLQKLLAKNEERKKHNSDDVLRINEINRRNREANIQQDLN 570
Query: 481 ASEL 484
A +L
Sbjct: 571 AQQL 574
>gi|198477196|ref|XP_002136714.1| GA23238 [Drosophila pseudoobscura pseudoobscura]
gi|198145017|gb|EDY71729.1| GA23238 [Drosophila pseudoobscura pseudoobscura]
Length = 640
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 108/215 (50%), Gaps = 12/215 (5%)
Query: 245 ADSDDDGAPGSGRPTY----DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKN 300
AD ++ P + PT D + + ++RS+L + +P F + ++ CF+ + +
Sbjct: 250 ADDNEKRQPMNASPTLLSSLDQLNSVMLKRSQLISFVDKPIFGQTVIDCFILMP-NTNLR 308
Query: 301 GPIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEF 360
IY++ + + D T Y+L ++TT LNV G R + VS+SP F
Sbjct: 309 STIYQITGLVHTDVT-----YQLGHKTTDYQLNVRHGRLERLTR--LDAVSNSPVPNVAF 361
Query: 361 KQWLREVERNSGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAE 420
+ W+ E+++ +P + +K++ I+K ++++ V ++++K+ + VA
Sbjct: 362 RNWIDNCEKDNWVLPELSLITKKEQDIKKATNYIFTEDDVADIVKKKRESGLSQEKVAVR 421
Query: 421 KDRLRRELEVAQSRHDEVDMERIKKRLQELEASRD 455
K RL E ++A + +D + R+ K ++E++ +D
Sbjct: 422 KIRLIEERDLALTNNDHEKVVRLDKEIKEIDQDQD 456
>gi|350635679|gb|EHA24040.1| hypothetical protein ASPNIDRAFT_181543 [Aspergillus niger ATCC
1015]
Length = 606
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 160/357 (44%), Gaps = 49/357 (13%)
Query: 262 DIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIG--RSKNGPIYRLCMVRNVDATEPDR 319
DI+ + RS A+ P F++ I GC+ RV IG R YRLC+++ +P
Sbjct: 269 DIQRTRVGRSNFAQVCFYPGFDDAISGCYARVNIGPNRETGQNEYRLCLIKKFSEGKP-- 326
Query: 320 SYKLENR-----TTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRM 374
Y +E + T +Y + G + + SDSP E EF ++ + + +M
Sbjct: 327 -YAMEGQNGRSFVTNQYAVLAHGK--AEREFPFVACSDSPFTEAEFNRYRQTMAVEDCKM 383
Query: 375 PSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSR 434
+K V K I ++ ++ + + L+++ S S+ + ++ + ++L++A+
Sbjct: 384 ATKSMVASKVTDINRLLNHKFTNEELNEKLRKQGSLDSK--SKFFKRVEVEKQLKLAREA 441
Query: 435 HDEVDMERIKKRLQ-----ELEASRDSKV---KDAKAIRLAEMNRKNRVENFKNA----- 481
D+ +MER++ L +L S SK K ++ RLAE+N +N+ N++N
Sbjct: 442 GDDAEMERLEAELASMATPKLAVSSHSKPRVDKPSEHERLAELNIRNQKLNYENVRRAQI 501
Query: 482 ---SELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANG- 537
++ ++ GEA ++PF R T++R +Y + NG NG P N
Sbjct: 502 EERKASRKAAAAVARGEAAHNPFMRVRTQARTHY----------DVNG--NGTPTAENNA 549
Query: 538 -EEGATGEVGMAATEAALEAAAGAGKL-----VDTNAPLDLGTESNMLHDFELDISL 588
+E E A+ A AG+ K V + ++ E+ D ELDI +
Sbjct: 550 SQENTASETPSKASTPASGTPAGSQKKTSKGGVASIRHRNMDDENIAALDLELDIEI 606
>gi|145237988|ref|XP_001391641.1| RNA polymerase II transcription elongation factor Rtf1p
[Aspergillus niger CBS 513.88]
gi|134076119|emb|CAK39477.1| unnamed protein product [Aspergillus niger]
Length = 606
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 160/357 (44%), Gaps = 49/357 (13%)
Query: 262 DIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIG--RSKNGPIYRLCMVRNVDATEPDR 319
DI+ + RS A+ P F++ I GC+ RV IG R YRLC+++ +P
Sbjct: 269 DIQRTRVGRSNFAQVCFYPGFDDAISGCYARVNIGPNRETGQNEYRLCLIKKFSEGKP-- 326
Query: 320 SYKLENR-----TTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRM 374
Y +E + T +Y + G + + SDSP E EF ++ + + +M
Sbjct: 327 -YAMEGQNGRSFVTNQYAVLAHGK--AEREFPFVACSDSPFTEAEFNRYRQTMAVEDCKM 383
Query: 375 PSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSR 434
+K V K I ++ ++ + + L+++ S S+ + ++ + ++L++A+
Sbjct: 384 ATKSMVASKVTDINRLLNHKFTNEELNEKLRKQGSLDSK--SKFFKRVEVEKQLKLAREA 441
Query: 435 HDEVDMERIKKRLQ-----ELEASRDSKV---KDAKAIRLAEMNRKNRVENFKNA----- 481
D+ +MER++ L +L S SK K ++ RLAE+N +N+ N++N
Sbjct: 442 GDDAEMERLEAELASMATPKLAVSSHSKPRVDKPSEHERLAELNIRNQKLNYENVRRAQI 501
Query: 482 ---SELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANG- 537
++ ++ GEA ++PF R T++R +Y + NG NG P N
Sbjct: 502 EERKASRKAAAAVARGEAAHNPFMRVRTQARTHY----------DVNG--NGTPTAENNA 549
Query: 538 -EEGATGEVGMAATEAALEAAAGAGKL-----VDTNAPLDLGTESNMLHDFELDISL 588
+E E A+ A AG+ K V + ++ E+ D ELDI +
Sbjct: 550 SQENTASETPSKASTPASGTPAGSQKKTSKGGVASIRHRNMDDENIAALDLELDIEI 606
>gi|428181055|gb|EKX49920.1| hypothetical protein GUITHDRAFT_161975 [Guillardia theta CCMP2712]
Length = 684
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 90/183 (49%), Gaps = 11/183 (6%)
Query: 257 RPTYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATE 316
R YD ++ + R +L ++ EPFF E + G FVRV +G + G R + + + E
Sbjct: 286 RVAYDKVEAARVSRDRLLEYVNEPFFGEFVQGLFVRVNLGENNLGET-RYILGQIIGLKE 344
Query: 317 PDRSY-----KLENRTTC-KYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERN 370
D+ Y K + + K L VT + ++QM +VS+ P L E +W ++V
Sbjct: 345 VDKKYEGVCSKTKRKIPLQKVLCVTHAGQQK--KFQMTLVSNKPFLNSEVDKWCKDVSIE 402
Query: 371 SGRMPSKQDVLEKKESIQK--INTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRREL 428
++P+ ++ E K ++K F Y V+Q+LQEK+ S NVA K L E+
Sbjct: 403 REKLPTDDELDELKAKLEKRWKEEFRYDQGVVEQILQEKRKKGSTSGNVALNKLCLHDEM 462
Query: 429 EVA 431
E A
Sbjct: 463 EEA 465
>gi|299746137|ref|XP_001837760.2| hypothetical protein CC1G_06966 [Coprinopsis cinerea okayama7#130]
gi|298406919|gb|EAU84104.2| hypothetical protein CC1G_06966 [Coprinopsis cinerea okayama7#130]
Length = 571
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 170/375 (45%), Gaps = 36/375 (9%)
Query: 92 HEGDSSNESDDDNHGQMTELEREMMIFERDDKKVDKNLRDKFRSRREERSTRSTKETPPL 151
+EG +E D M E++RE ++ ER ++K + L++K + R R
Sbjct: 65 YEGQYVDEEDKQRLLAMPEIKREEILAERIEEK--QRLQEKQVLAQMVRQQRGGGGVVID 122
Query: 152 PSSRSARLAARSADRAAAKDDA--LNELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSP- 208
S S + R A K+ L+EL+AKR R +D SR + LSP
Sbjct: 123 DDSVSRAAKRQHMQRGATKEKTRKLDELKAKR----------RAKDESRKRAK---LSPN 169
Query: 209 VKRKAFTPAGLS-SSSQSESESRSHSDDE--------GSTGDGGMADSDDDGAPGSGRPT 259
R++ +P + S +SE + SD E G + + ++D P S
Sbjct: 170 ANRRSTSPQDMDISDEESEDGQFTRSDHEEERERRLLGISTSRSKEEEEEDTTPAS---- 225
Query: 260 YDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDR 319
D + + R +AKW + P+F+E + +VR IG + P+YR+C ++ + A +P +
Sbjct: 226 LQDFNDCRLSRDMVAKWCLCPWFDEYVKNSWVRYLIGNEGSEPVYRMCEIQGI-APKPVK 284
Query: 320 SYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQD 379
YK+ +R + + + G S + M +S+S + EF + +R + +P++++
Sbjct: 285 PYKVNDRLINQAVELKHGQ--SVREFSMDRISNSDFTQREFDRLVRVCKAEGVTLPTRKE 342
Query: 380 VLEKKESIQKINTFVYSAATVKQMLQEKK--SASSRPLNVAAEKDRLRRELEVAQSRHDE 437
+ +K ++K+ + + ML+ KK +S + E+ RL + +A R D
Sbjct: 343 LQDKTAQMKKLQDTPLTDQDITFMLKRKKELQSSKSSSELMLERSRLSQARSLALKRLDH 402
Query: 438 VDMERIKKRLQELEA 452
+ ++ ++ LEA
Sbjct: 403 KEAAELEDKIAALEA 417
>gi|195156193|ref|XP_002018985.1| GL25666 [Drosophila persimilis]
gi|194115138|gb|EDW37181.1| GL25666 [Drosophila persimilis]
Length = 656
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 108/215 (50%), Gaps = 12/215 (5%)
Query: 245 ADSDDDGAPGSGRPTY----DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKN 300
AD ++ P + PT D + + ++RS+L + +P F + ++ CF+ + +
Sbjct: 262 ADDNEKRQPMNASPTLLSSLDQLNSVMLKRSQLISFVDKPIFGQTVIDCFILMP-NTNLR 320
Query: 301 GPIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEF 360
IY++ + + D T Y+L ++TT LNV G R + VS+SP F
Sbjct: 321 STIYQITGLVHTDVT-----YQLGHKTTDYQLNVRHGRLERLTR--LDAVSNSPVPAVAF 373
Query: 361 KQWLREVERNSGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAE 420
+ W+ E+++ +P + +K++ I+K ++++ V ++++K+ + VA
Sbjct: 374 RNWIDSCEKDNWVLPELSLITKKEQDIKKATNYIFTEDDVADIVKKKRESGLSQEKVAVR 433
Query: 421 KDRLRRELEVAQSRHDEVDMERIKKRLQELEASRD 455
K RL E ++A + +D + R+ K ++E++ +D
Sbjct: 434 KIRLIEERDLALTNNDHEKVVRLDKEIKEIDQDQD 468
>gi|119497997|ref|XP_001265756.1| RNA polymerase II transcription elongation factor Rtf1p, putative
[Neosartorya fischeri NRRL 181]
gi|119413920|gb|EAW23859.1| RNA polymerase II transcription elongation factor Rtf1p, putative
[Neosartorya fischeri NRRL 181]
Length = 607
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 157/350 (44%), Gaps = 35/350 (10%)
Query: 262 DIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPI--YRLCMVRNVDATEPDR 319
DI+ + R+ A+ P F+E I GC+ RV IG +++ I YRLC++R P
Sbjct: 270 DIQRARVGRTNFAQVCFYPGFDEAISGCYARVNIGPNRDTGINEYRLCLIRRFTEGRP-- 327
Query: 320 SYKLE-----NRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRM 374
Y +E + T +Y + G + + SDSP E EF ++ + + +M
Sbjct: 328 -YAMESPNGRSFVTNQYAVLAHGK--AEREFPFIACSDSPFTEAEFNRYRQTLAVEDCKM 384
Query: 375 PSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSR 434
+K + +K I ++ ++ + + L+++ S ++ ++ ++L++A++
Sbjct: 385 ATKSMLAKKVADINRLINHQFTKEELNEKLRKQGSLDNKMRTF--KRLETEKQLKLARAA 442
Query: 435 HDEVDMERIKKRLQELE------ASRDSKVKDAKA--IRLAEMNRKNRVEN--------F 478
D+ ++ R++K L EL +++ SK + K+ RLAE+N +N+ N
Sbjct: 443 GDDEEVSRLEKELAELTGPKLAFSTQPSKPRTEKSDYERLAELNLRNQKLNTESVRRAQL 502
Query: 479 KNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANGE 538
+ ++ ++ GEA +PF R T ++ +Y + G + ++ + G PG +
Sbjct: 503 EERKASRKAAAAVARGEAQANPFMRVRTLAKTHYDAN-GNSLIPDSISSRGGTPGTGSDT 561
Query: 539 EGATGEVGMAATEAALEAAAGAGKLVDTNAPLDLGTESNMLHDFELDISL 588
A T ++ G + N + E+ D ELDI +
Sbjct: 562 PSKASTPKPAVTTQKKQSKGGIASIRHRN----MDDENIAALDLELDIEI 607
>gi|258564851|ref|XP_002583170.1| predicted protein [Uncinocarpus reesii 1704]
gi|237906871|gb|EEP81272.1| predicted protein [Uncinocarpus reesii 1704]
Length = 622
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 124/518 (23%), Positives = 206/518 (39%), Gaps = 74/518 (14%)
Query: 103 DNHGQMTELEREMMIFERDDKKVDKNLRDKFRSRREERSTRSTKETPPLPSSRSARLAAR 162
D H Q L R + + ER++ KV + + K +R + K T L R
Sbjct: 147 DRHNQDLALRRLLAMREREEAKVTEKRKRKASDTEGQRKSSRQKTT----------LGGR 196
Query: 163 SADRAAAKDDALNELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSPVKRKAFTPAGLSSS 222
A+ +A R ++ K+++ +R RDAS G R SP S
Sbjct: 197 KVGEASGAIEAYKRQREQKGKREE----QRRRDASSRKKGERSASPD----------GSD 242
Query: 223 SQSESESRSHSDDEGSTGDGGMADSDDDGAPGSGRPTYDDIKEITIRRSKLAKWFMEPFF 282
+ ES DD+ A D P R D + + R A++ P F
Sbjct: 243 VDAHGESEVEWDDDARRRSTSPAK---DALPAEFR----DFERARVSRRNFAQYCFYPNF 295
Query: 283 EELIVGCFVRVGIGRSKNG--PIYRLCMVRNVDATEPDRSYKLENR--TTCKYLNVTWGN 338
E+LI GC+ R+ +G + +YRLC++++ P L R T +Y + GN
Sbjct: 296 EKLIAGCYTRLNVGPHPDTGETVYRLCLIKSFVEGRPYAIEGLNGRKFVTKQYAVLEHGN 355
Query: 339 ESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKESIQKINTFVYSAA 398
S + SD P E EF ++ + + +MP+K + +K I + + S
Sbjct: 356 --SKKEFPFIFCSDGPFTESEFNRYRQTMVVEGFKMPTKSVLAKKINDIHSLINYQLSKE 413
Query: 399 TVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKRLQELEASRDS-- 456
+++ L+ + + ++ ++ +L++ + A + DE + L L + +
Sbjct: 414 ELEEKLKRQGTHDNK--MAVFQRIQLQKRRQEALASGDEAAIAECDTELARLSGPKLAFG 471
Query: 457 -------KVKDAKAIRLAEMNRKNR---VENFKNASELKRVNTSLKA-----GEAGYDPF 501
+ + RLAE+NR+N+ EN + A +R L+ GEA D F
Sbjct: 472 TSLVEPRSSEKTQQERLAELNRRNQKLNAENVRKAEIAERRAARLQQAAVARGEALPDRF 531
Query: 502 SRRWTRSRNYYISK-----PGEEVTAEANGDKN-----GVPGGANGEEGATGEVGMAATE 551
+R TR+R +Y + P +E +E +G G P G T V + +
Sbjct: 532 ARVKTRARTHYDASGNRLVPKKEQRSEISGSVTPLTAAGTPNKVTPPRGVT-PVNIIKKD 590
Query: 552 AALEAAAGAGKL-VDTNAPLDLGTESNMLHDFELDISL 588
A A G KL NA L DFE+DI +
Sbjct: 591 AP--AQTGIPKLRYAPNADEILAAS----LDFEIDIEI 622
>gi|452824738|gb|EME31739.1| RNA polymerase-associated protein RTF1-like protein [Galdieria
sulphuraria]
Length = 605
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 144/325 (44%), Gaps = 26/325 (8%)
Query: 266 ITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRS---KNGPIYRLCMVRNVDATEPDRSYK 322
+ RR L + +PFF+++IVG F R+ +G + N P+YRL + + EP YK
Sbjct: 285 MFFRRQMLEMFLSKPFFDKMIVGMFARLSVGTAPDNPNIPVYRLVRIAGIHEREP--RYK 342
Query: 323 LENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDV-- 380
+ + T K + +G S + + S+ P E EF +W +++ + +P+K DV
Sbjct: 343 VGGQYTNKRIICLFG--SVKGEFSIERFSNKHPTEAEFDRWFKQMMNDRETIPTKDDVNY 400
Query: 381 -LEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQ----SRH 435
+ +K N V K + + +K R +N A+K+ + ++ + S
Sbjct: 401 LISLSLDYRKGNIQVSDEELQKHIEKFEKLNPER-VNYVAKKNEILTQITFLRDNGASAA 459
Query: 436 DEVDMERIKKRLQELEASRD-SKVKDAKAIRLAEMNRKNRVENFKNASELKRVNTSLKAG 494
+ D ER ++ LEA +++D R+ + RK++ EN + SE S
Sbjct: 460 EIADYERKLVEIERLEAKYHRRRLEDMVDDRMKSLARKSKEENARMDSERIEKQISKDRL 519
Query: 495 EAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANGEEGATGEVGMAATEAAL 554
+ +PFSRR +R Y T + G + + +E E AA EAAL
Sbjct: 520 PSELNPFSRRTSRGNTSYF-------TIDRKGSELDLSQSLQNKEEDFKE--NAAIEAAL 570
Query: 555 EAAAGAGK-LVDTNAPLDLGTESNM 578
+ + VD+ P+++ N+
Sbjct: 571 KMVDHPKEDAVDSVNPVEIAETVNV 595
>gi|198476153|ref|XP_001357277.2| GA16406 [Drosophila pseudoobscura pseudoobscura]
gi|198137569|gb|EAL34346.2| GA16406 [Drosophila pseudoobscura pseudoobscura]
Length = 646
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 108/215 (50%), Gaps = 12/215 (5%)
Query: 245 ADSDDDGAPGSGRPTY----DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKN 300
AD ++ P + PT D + + ++RS+L + +P F + ++ CF+ + +
Sbjct: 256 ADDNEKRQPMNASPTLLSTLDQLNSVMLKRSQLISFVDKPIFGQTVIDCFILMP-NTNLR 314
Query: 301 GPIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEF 360
IY++ + + D T Y+L ++TT LNV G R + VS+SP F
Sbjct: 315 STIYQITGLVHTDVT-----YQLGHKTTDYQLNVRHGRLERLTR--LDAVSNSPVPNVAF 367
Query: 361 KQWLREVERNSGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAE 420
+ W+ E+++ +P + +K++ I+K ++++ V ++++K+ + VA
Sbjct: 368 RNWIDNCEKDNWVLPELSLITKKEQDIKKATNYIFTEDDVADIVKKKRESGLSQEKVAVR 427
Query: 421 KDRLRRELEVAQSRHDEVDMERIKKRLQELEASRD 455
K RL E ++A + +D + R+ K ++E++ +D
Sbjct: 428 KIRLIEERDLALTNNDHEKVVRLDKEIKEIDQDQD 462
>gi|449668988|ref|XP_002159856.2| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Hydra
magnipapillata]
Length = 791
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 103/432 (23%), Positives = 177/432 (40%), Gaps = 59/432 (13%)
Query: 98 NESDDDNHGQMTELEREMMIFERDDKKVDKNLRDKFRSRREERSTRSTKETPPLPSSRSA 157
NE D QMTE ERE +F R +K R+ ++R E T+ +
Sbjct: 137 NEEDRLMLEQMTEKEREQELFNRMEK------REAMKTRLEIEHKLHTERKRKNKKEKGK 190
Query: 158 RLAARSADRAAAKDDAL-------NELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSPVK 210
+++ D+A A N + K+LK D +R+ + + S+ P+
Sbjct: 191 EISSSLNDKANYYSIASRKGNRKRNLIEDKKLKAMDELKQKRIEKKEKLENQSK-REPLN 249
Query: 211 RKAFTPAGLSSSSQSESESRSHSDDEGSTGDGGMADSDDDGAPGSGRPTYDDIKEITIRR 270
K + ++E + SD D + ++ P S R + ++ I + R
Sbjct: 250 TKDVYSDEDDEAEETEKVEAAASDKSSVELDSDDEEEKEEDKPISSR---EQLEIIRLSR 306
Query: 271 SKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRSYKLENRTTCK 330
KL KW PFF ++ GCFVR+GIG P+YR+ + + TE + Y L + T K
Sbjct: 307 FKLEKWVHLPFFPRVVTGCFVRMGIGNHDGKPVYRVGEI--IGVTETPKVYNLGSTRTNK 364
Query: 331 YLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKESIQKI 390
L + G + R M VS+S E EF +W E+ +P+ + K E I +
Sbjct: 365 GLKIRHGMQEKVFR--MEYVSNSQFTESEFLKWKEEMSLVELPLPTVSHIKRKSEEIAES 422
Query: 391 NTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLR--------------RELEVAQSRHD 436
+ + V+ +++EK +R R RE E+A+ +
Sbjct: 423 KGYSFKEDDVEAIVKEK--------------NRFRKNPFNYASTKNTLIREKELAEQAGN 468
Query: 437 EVDMERI-------KKRLQELEASRDSKVKDAKAIRLAEMNRKNRVENFKNASELKRVNT 489
V++ ++ ++R Q L+ R + + I E NRK V + + A + + +
Sbjct: 469 TVELAKVKEKLEELEERAQMLDRKRSGALNNVSFIN--ERNRKKNVYDAEKACVVTKTHI 526
Query: 490 -SLKAGEAGYDP 500
+ KA G+ P
Sbjct: 527 PTPKASCVGFLP 538
>gi|354548479|emb|CCE45215.1| hypothetical protein CPAR2_702280 [Candida parapsilosis]
Length = 568
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 144/305 (47%), Gaps = 47/305 (15%)
Query: 261 DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIG--RSKNGPIYRLCMVRNVDA-TEP 317
DDI I + RS L+++ P F++ ++ + +V +G R+ P+YR MV+ +D T P
Sbjct: 234 DDINRIKVGRSLLSQYCYHPGFDDAVLDTYTKVNVGADRATKAPMYR--MVKIIDLKTRP 291
Query: 318 DRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSK 377
+++YK+ + Y V+ N++ + M + SDSP ++EF ++L+E+++ M
Sbjct: 292 EKAYKMGSSKYDLYFLVSQ-NKNQKKPFAMNLFSDSPITQDEFDRYLKELDKTGESMDLL 350
Query: 378 QDVLEKKESIQKINTFVYSAATVKQML-----QEKKSASSRPLNVAAEKDRLRRELEVAQ 432
DV +K + +Q + T + V +M+ +++S + + K +L E ++ +
Sbjct: 351 DDVNDKFKQLQTLFTTGLTDKDVNEMIARKQRMQRQSGNYTTYDAVKTKAKLLDEYKICK 410
Query: 433 SRHDEVDMERIKKRLQELEASR--DSKVKD--------------------------AKAI 464
+ + ++K ++ LE + D+ ++D +
Sbjct: 411 QQGN------LQKSMEILEEVKNIDAVLQDQTGAASTAASTTGSGSLSSSAVAALQSSMA 464
Query: 465 RLAEMNRKNRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEA 524
++ E NRK EN + A + + ++ + G DPFSR T +R +Y EE A+A
Sbjct: 465 KVNERNRKLNQENIRKAEIKHKTSIQNQSSQDG-DPFSRLKTNTRMFYQELINEE-NAKA 522
Query: 525 NGDKN 529
D N
Sbjct: 523 FKDVN 527
>gi|402223878|gb|EJU03942.1| plus-3-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 523
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 106/217 (48%), Gaps = 7/217 (3%)
Query: 266 ITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGP-IYRLCMVRNVDATEPDRSYKLE 324
+ + R + KW P FE+L+ C++R +G G +YR+C + + A P +YK++
Sbjct: 218 VRLGRDLIEKWCCMPKFEDLVKDCWIRFLVGPGDKGQNVYRVCQIVGLTAESP-VTYKIQ 276
Query: 325 NRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKK 384
+ + + G S + M +S+SP + EF + + + + ++ +PS+ D+ K
Sbjct: 277 DTVFNQQALLKHGK--STKPFNMDRISNSPFTDREFDRLVAQCKTDNVELPSRADIEAKA 334
Query: 385 ESIQKINTFVYSAATVKQMLQEKKSASSR--PLNVAAEKDRLRRELEVAQSRHDEVDMER 442
+++ V + + QM++ K S + AEK RL +E +A +RH+ +++R
Sbjct: 335 IKLEEYRHKVPTDQEITQMIKRKAGMSGKKDAHQAKAEKSRLHQERALALARHNLAEVQR 394
Query: 443 IKK-RLQELEASRDSKVKDAKAIRLAEMNRKNRVENF 478
+ L + AS V + ++ E NRK +E
Sbjct: 395 LDTLTLAQERASPAPTVMEDTFAKVNERNRKANIERI 431
>gi|336260093|ref|XP_003344843.1| hypothetical protein SMAC_06127 [Sordaria macrospora k-hell]
gi|380089040|emb|CCC12984.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 601
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 140/302 (46%), Gaps = 31/302 (10%)
Query: 262 DIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNG--PIYRLCMVRNVDATEPDR 319
D + + + RS+ A+ P F+E + GCFVR+ IG + +YR+ +++ +
Sbjct: 256 DFERVRVGRSRFAEVAFYPGFDEALTGCFVRLNIGPDPDTRQDVYRMALIKGFTTG---K 312
Query: 320 SYKLENRTTCKY---LNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSG-RMP 375
+Y LE+ + + V + + W + SD + EF ++ ++V N G P
Sbjct: 313 AYALEDHQGHQMVVDMYVKAAHGKAVREWPLITCSDRKFTDAEFNRY-KQVCLNEGVPFP 371
Query: 376 SKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRH 435
KQ +++K + I ++ ++ + L+ + + ++ A++D ++++L++A+ +
Sbjct: 372 DKQTLIDKIDDINRLVQRTWTEQELSDKLKRQNALQAK--FSGAQRDYIKKQLDIARQAN 429
Query: 436 DEVDMERIKKRLQELEASR----------DSKVKDAKAIRLAEMNRKNRVEN-------- 477
DE + R ++RL++LE R D K + +LA N +NR +N
Sbjct: 430 DEAAIARYQERLEKLEVPRLAFRTSLTKKDGKKDLTQQEKLALKNMENRRKNAEEVRKAQ 489
Query: 478 FKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANG 537
+ + +++ ++ GEA + SRR +R ++ E+ T + PG +
Sbjct: 490 LRERARARQIEKKIERGEAVQEDMSRRLI-TRPKFVHDSSEKPTPSPSKAGTPAPGTPSK 548
Query: 538 EE 539
E
Sbjct: 549 AE 550
>gi|121710816|ref|XP_001273024.1| RNA polymerase II transcription elongation factor Rtf1p, putative
[Aspergillus clavatus NRRL 1]
gi|119401174|gb|EAW11598.1| RNA polymerase II transcription elongation factor Rtf1p, putative
[Aspergillus clavatus NRRL 1]
Length = 605
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 114/505 (22%), Positives = 206/505 (40%), Gaps = 79/505 (15%)
Query: 75 DDQGSQEEGDYDGGASEHEGDSSNESDDDNHGQMTELEREMMIFER----DDKKVDKNLR 130
D +GS E GD D +E + D + M E++RE ++ ER D + D LR
Sbjct: 89 DSEGSSEGGDEDRPIFPYEKLYYSAKDKEEIMAMPEIQREQILSERAQEVDRRNQDLALR 148
Query: 131 DKFRSRREERSTRSTKETPPLPSSRSARLAARSADRAAAKDDALNELRAKRLKQQDPEAH 190
SR + + R K S R A +A L E + K +Q+
Sbjct: 149 RLLASRERDEARRVKK------SKRKASVAD------------LEEGQRKSSRQKTTLGG 190
Query: 191 RRLRDASRGGSGSRVLSPVKRKAFTPAGLSSSSQSESESRSHSDDEGSTGDGGMADSDDD 250
R++ G S + KR+ + E+ + D+ + D G +D D D
Sbjct: 191 RKV------GEASEAIEAYKRQREKKGKRDELRRRET----ATGDQATPKDEGPSDKDAD 240
Query: 251 G--------------APGSGRPT-YDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGI 295
G P P DI+ + R+ A+ P F+E I GC+ RV I
Sbjct: 241 GESEVEWDNRERSPSLPKDDPPAELRDIQRARVGRTNFAQVCFYPRFDECISGCYARVNI 300
Query: 296 G--RSKNGPIYRLCMVRNVDATEPDRSYKLE-----NRTTCKYLNVTWGNESSAARWQMA 348
G R YRLC+++ P Y +E + T +Y + G + +
Sbjct: 301 GPNRDSGNNEYRLCLIKRFTVGRP---YAMEGPNGRSFVTNQYAVLAHGK--AEREFPFV 355
Query: 349 MVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKK 408
SDSP E EF ++ + + ++ +K + EK I ++ ++ + + L+++
Sbjct: 356 ACSDSPFTEAEFSRYRQTMAVEDCKIATKSTLAEKVADINRLLNHQFTKEELNEKLRKQG 415
Query: 409 SASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKRLQELEA---------SRDSKVK 459
S ++ ++ ++L++A++ D+ ++ +++K L EL +R K
Sbjct: 416 SLDNKMRTF--KRLETEKQLKLARAAGDDEEVSKLEKELAELAGPKLAVSSHNARPRSKK 473
Query: 460 DAKAIRLAEMNRKNRVEN--------FKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNY 511
+ RLAE+N +N+ N + ++ ++ GEA +PF R T +R +
Sbjct: 474 PSDYERLAELNFRNQKLNTESVRRAQLEERRANRKAAAAVARGEAQANPFMRVRTLARTH 533
Query: 512 YISKPGEEVTAEANGDKNGVPGGAN 536
Y + G +T ++ +N P A+
Sbjct: 534 YDAN-GNSLTPDSTASRNETPATAS 557
>gi|302912762|ref|XP_003050771.1| hypothetical protein NECHADRAFT_41415 [Nectria haematococca mpVI
77-13-4]
gi|256731709|gb|EEU45058.1| hypothetical protein NECHADRAFT_41415 [Nectria haematococca mpVI
77-13-4]
Length = 607
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 85/373 (22%), Positives = 157/373 (42%), Gaps = 44/373 (11%)
Query: 245 ADSDDDGAPGSGRPTYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPI- 303
AD D P R D + + R++ A+ P FE I GC++R+ +G + I
Sbjct: 248 ADEPRDQPPAELR----DYDRVRLGRNEFAQVCFTPGFEHAITGCYIRIALGPHPDTGIE 303
Query: 304 -YRLCMVRNVDATEPDRSYKLE----NRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEE 358
YR+ +++ + P Y L T +Y+ G + + S +
Sbjct: 304 QYRMALIKGFTTSRP---YALNGPNGTFVTDQYVKAAHGK--AIKEFPFIAASSGKFSDA 358
Query: 359 EFKQWLREVERNSGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVA 418
E ++ +P+K +L+K + I K+ +++ +K L++ K R
Sbjct: 359 ELNRYKVTCHNEGVTLPTKAYLLDKIDEINKLINHSWTSEEIKGRLKKIKDLKKR--FDP 416
Query: 419 AEKDRLRRELEVAQSRHDEVDMERIKKRLQELEASR--------DSKVKDA-----KAIR 465
AE++R+ R LE A+ R D+ +E +++ L +L R SK+ +A + R
Sbjct: 417 AERERVSRILEEARERGDDAKVEELQEELDKLGTQRLAFRTSLGPSKLSEAPKGQSEQDR 476
Query: 466 LAEMNRKNRVEN--------FKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKPG 517
LAE NR+NR N K ++ + + ++K GEA SRR R++ ++
Sbjct: 477 LAERNRENRRLNAEAVRKAQLKEKAKSREIEMAIKRGEAYQGDMSRRL-RTKAKFVYDVN 535
Query: 518 EEVTAE--ANGDKNGVPGGANGEEGATGEVGMAATEAALEAAAGAGKLVDTNAPLDLGTE 575
E V + ANG PG + + A ++ + E + + PL +
Sbjct: 536 ESVDKKPAANGSGTSTPGTSTPKPAAKSQLSSHLAKLQEEKYQEKKGIPTIHKPL---MD 592
Query: 576 SNMLHDFELDISL 588
+++ +LDI +
Sbjct: 593 DDVIGSLDLDIDV 605
>gi|70988949|ref|XP_749325.1| RNA polymerase II transcription elongation factor Rtf1p, putative
[Aspergillus fumigatus Af293]
gi|66846956|gb|EAL87287.1| RNA polymerase II transcription elongation factor Rtf1p, putative
[Aspergillus fumigatus Af293]
gi|159128739|gb|EDP53853.1| RNA polymerase II transcription elongation factor Rtf1p, putative
[Aspergillus fumigatus A1163]
Length = 607
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 157/350 (44%), Gaps = 35/350 (10%)
Query: 262 DIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPI--YRLCMVRNVDATEPDR 319
DI+ + R+ A+ P F+E I GC+ RV IG +++ I YRLC+++ P
Sbjct: 270 DIQRARVGRTNFAQVCFYPGFDEAISGCYARVNIGPNRDTGINEYRLCLIKRFTEGRP-- 327
Query: 320 SYKLE-----NRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRM 374
Y +E + T +Y + G + + SDSP E EF ++ + + +M
Sbjct: 328 -YAMESPNGRSFVTNQYAVLAHGK--AEREFPFIACSDSPFTEAEFNRYRQTMAVEDCKM 384
Query: 375 PSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSR 434
+K + +K I ++ ++ + + L+++ S ++ ++ ++L++A++
Sbjct: 385 ATKSMLAKKVADINRLINHQFTKEELNEKLRKQGSLDNKMRTF--KRLETEKQLKLARAA 442
Query: 435 HDEVDMERIKKRLQELE------ASRDSKVKDAKA--IRLAEMNRKNRVEN--------F 478
D+ ++ R++K L EL +++ SK + K+ RLAE+N +N+ N
Sbjct: 443 GDDEEVSRLEKELAELMGPKLAFSTQPSKPRKEKSDYERLAELNLRNQKLNTESVRRAQL 502
Query: 479 KNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANGE 538
+ ++ ++ GEA +PF R T ++ +Y + G + ++ + G P +
Sbjct: 503 EERKASRKAAAAVARGEAQANPFMRVRTLAKTHYDAN-GNSLIPDSLSSRGGTPATGSET 561
Query: 539 EGATGEVGMAATEAALEAAAGAGKLVDTNAPLDLGTESNMLHDFELDISL 588
A T ++ G G + N + E+ D ELDI +
Sbjct: 562 PSKPSTPKPAVTTQKKQSKGGIGSIRHRN----MDDENIAALDLELDIEI 607
>gi|342319917|gb|EGU11862.1| Pol II transcription elongation factor [Rhodotorula glutinis ATCC
204091]
Length = 587
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 124/267 (46%), Gaps = 26/267 (9%)
Query: 262 DIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGR-SKNGPI-YRLCMVRNVDATEPDR 319
D+ +I + R+KLA+ P+FEE I G FVR +G + G + Y +C V V EPDR
Sbjct: 278 DLLQIQVTRTKLAEMCRAPWFEEWIKGAFVRYSLGPDQRTGMVRYSVCQVVGV---EPDR 334
Query: 320 SYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQD 379
Y+ E T +L + G + + M VS+SP E+ +W ++ + +P+
Sbjct: 335 PYRFEGVQTDLWLRLKHGK--AERLFGMEAVSNSPIDSHEWVRWTKQC--TADEVPATTP 390
Query: 380 VLEK--KESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDE 437
V K KE + K ++ + + L +K +R AA + RL+ + + A D
Sbjct: 391 VQAKKIKEQLGKHTSYTLTEEDLAAELAKK----NRQPGGAAARVRLKMQRDHAMQNGDV 446
Query: 438 VDMERIKKRLQELEASRDSKVKDA-KAIRLAEMNRKNRVENFKNA-----SELKRVNTSL 491
+ +L ELE V DA + R+ + NR E K A E ++++ +L
Sbjct: 447 EKAAELSAQLAELEG---PAVDDADRTKRINDRNRAANREEVKRAEARSQEERRKISEAL 503
Query: 492 KAGEAG--YDPFSRRWTRSRNYYISKP 516
+ G+ DP +R T R Y S+P
Sbjct: 504 QRGDTSVKVDPSARVKTMPRLNYDSRP 530
>gi|448536022|ref|XP_003871052.1| Rtf1 RNA polymerase II-associated Paf1 complex subunit [Candida
orthopsilosis Co 90-125]
gi|380355408|emb|CCG24927.1| Rtf1 RNA polymerase II-associated Paf1 complex subunit [Candida
orthopsilosis]
Length = 547
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 108/459 (23%), Positives = 203/459 (44%), Gaps = 46/459 (10%)
Query: 93 EGDSSNESDDDNHGQMTELEREMMIFERDDKKVDKNLRDKFRSRREERSTRSTKETPPLP 152
EG +E D + M E++RE ++FER + DKF+ R+ + + P
Sbjct: 72 EGKYKDEQDREELEAMDEIKREEILFERSQE------MDKFKERQYLQQRMKAQREPKQG 125
Query: 153 SSRSARLAARSADRAAA--KDDALNELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSPVK 210
+ + R + RS A K+ L+EL+ +R E H R + +R S
Sbjct: 126 RTENLRSSTRSKTGGAKSKKESKLSELKKER------EKHTRKK--TRKSDDYEEESDED 177
Query: 211 RKAFTPAGLSSSSQSESESRSHSDDEGSTGDGGMADSDDDGAPGSGRPTYDDIKEITIRR 270
+ + E + + E GG++ + + + +DI I + R
Sbjct: 178 EEDEEGEDEDEGLLEDDEDAYNDESETEVMWGGVSKTKRKRSTELAK--LEDINRIKVGR 235
Query: 271 SKLAKWFMEPFFEELIVGCFVRVGIGRSK--NGPIYRLCMVRNVDA-TEPDRSYKLENRT 327
S L+++ P F++ ++ + +V +G K P+YR MV+ +D T P++SY++ +
Sbjct: 236 SLLSQYCYHPGFDDTVLDTYTKVNLGVDKVTRTPMYR--MVKIIDMKTRPEKSYRIGSSK 293
Query: 328 TCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKESI 387
Y V+ N++ + M + SDSP +EEF ++L E+++ + DV +K +
Sbjct: 294 YDLYFLVSQ-NKNQKKPFAMNLFSDSPITQEEFDRYLNELDKTGETIDLLDDVNDKYNQL 352
Query: 388 QKINTFVYSAATVKQMLQEKKSASSRPLNVAA-----EKDRLRRELEVAQSRHDEVDMER 442
Q + + + +M+ K+ S + N + K RL EL++ + + ++++
Sbjct: 353 QTLFNKGLTDEDINEMITRKQRMSRQSGNYTSYDAVKTKARLMDELKIYKQQG---NLQK 409
Query: 443 IKKRLQELE------------ASRDSKVKDAKAIRLAEMNRKNRVENFKNASELKRVNTS 490
K+ ++EL+ S S + ++ E NRK EN + A + +
Sbjct: 410 TKEIIEELKDINNVLQDQNFNTSSTSSSSQSNIAKVNERNRKLNQENIRKAEIKFKSDIQ 469
Query: 491 LKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKN 529
++ + G DPFSR T +R +Y EE A+A D N
Sbjct: 470 NQSNQDG-DPFSRLKTVTRMFYQDLINEE-NAKALKDVN 506
>gi|171677973|ref|XP_001903937.1| hypothetical protein [Podospora anserina S mat+]
gi|170937055|emb|CAP61714.1| unnamed protein product [Podospora anserina S mat+]
Length = 534
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 98/389 (25%), Positives = 167/389 (42%), Gaps = 59/389 (15%)
Query: 229 SRSHSDDEGSTGDGGMADSDDDGAPGSGRPTYD--DIKEITIRRSKLAKWFMEPFFEELI 286
SRSH D + GD + P D D++ + + RS+ A+ P FE I
Sbjct: 173 SRSHDDRDSDAGDWRRSSRQKSRTPEKEILPADLRDVERVRVGRSRFAEVCFYPGFERAI 232
Query: 287 VGCFVRVGIG--RSKNGPIYRLCMVRNVDATEPDRSYKLENRTTCK-----YLNVTWGNE 339
GCFVR+ IG ++ +YR+ +++ + P Y + + + + Y+ V G+
Sbjct: 233 TGCFVRINIGPDQTTRQDVYRMAIIKGFNTGRP---YAMPDSSGHQMVVDLYVKVAHGD- 288
Query: 340 SSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKESIQKINTFVYSAAT 399
+ W SD E E+ ++ + + +P+K ++ K I IN V T
Sbjct: 289 -AVREWPFISCSDRNFTESEWNRYKQVCLQAGISVPTKTQLVNK---ISDINGLVRHKWT 344
Query: 400 VKQMLQEKKSASSRPLNVAA-EKDRLRRELEVAQSRHDEVDMERIKKRLQELE------- 451
+++ ++ K +S ++ E+D L R+LE A++R DE ++ ++K+L++L
Sbjct: 345 EQEIAEKLKRQNSLMQKFSSTERDNLTRQLEAARARGDEDAVDSLQKKLEDLSTPKLAFR 404
Query: 452 ---ASRDSKVKDAKAI----RLAEMNRKNR---VENFKNASELKRVNTSL-KAGEAGYDP 500
S D K + K + +LA +N +NR E + A +R T + K A D
Sbjct: 405 TSLTSADKKRPEGKGLTQQEKLALLNAENRRRNAEEVRKAQIKERSRTIIPKKNVAAADK 464
Query: 501 FSRRWTRSRNYYISKPGEEVTAEANGDKNG--VPGGANGEEG--ATGEVGMAATEAALEA 556
S+ + + P ANG+ NG +P A +E AT + G+ A L
Sbjct: 465 ASQEGDSQKESGSNTPA------ANGNSNGGLLPHIAKLQEQQRATAKNGLPLVHAPLMD 518
Query: 557 AAGAGKLVDTNAPLDLGTESNMLHDFELD 585
D LDLG D E+D
Sbjct: 519 D-------DIIGALDLGI------DIEID 534
>gi|408397545|gb|EKJ76686.1| hypothetical protein FPSE_03097 [Fusarium pseudograminearum CS3096]
Length = 597
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 148/347 (42%), Gaps = 50/347 (14%)
Query: 240 GDGGMADSDDDGAPGSGRPTYD-------------DIKEITIRRSKLAKWFMEPFFEELI 286
GD G DSDDD G PT D D + + R++ A+ P FE+ I
Sbjct: 219 GDSGAEDSDDDYNRGRS-PTPDVDEARDQPPAELRDYDRVRLGRNEFAQVCFHPGFEQGI 277
Query: 287 VGCFVRVGIGRSKNGPI--YRLCMVRNVDATEPDRSYKLEN----RTTCKYLNVTWGNES 340
+GC++R+ +G I YR+ +++ + P Y ++ T +Y+ G
Sbjct: 278 IGCYIRIALGPHPETGIEQYRMAVIKGFSTSRP---YAIQGPQGVLVTDQYVKAAHGK-- 332
Query: 341 SAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKESIQKINTFVYSAATV 400
+ + S + E ++ +P+K + +K + I ++ +++ +
Sbjct: 333 AIKEFPFIAASSGKFTDSELNRYRVTCHNEGVTLPTKAYLTDKVDDINRLINHSWTSEEI 392
Query: 401 KQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKRLQELEASR------ 454
K L + S R + AE++R+ + L+ A+ R D+ E +++ L L + R
Sbjct: 393 KTRLA-RISDLKRRFD-PAERERIAKLLDEARQRGDDDRAEELQEELDNLGSQRLAFRTS 450
Query: 455 ------DSKVKDAKAIRLAEMNRKNRVEN--------FKNASELKRVNTSLKAGEAGYDP 500
+ ++ RLAE NR+NR N K ++ K + +LK GE
Sbjct: 451 LGSKHSEEPKAQSEQDRLAERNRENRRLNAEAVRKAQLKEKAKSKEIEAALKRGETYQGD 510
Query: 501 FSRRWTRSRNYYISKPGEEV--TAEANGDKNGVPGGANGEEGATGEV 545
SRR R++ ++ E+V + ANG+ G PG + + A ++
Sbjct: 511 MSRRL-RTKAKFVHDANEKVEQKSAANGNGAGTPGNSTSKSAAKSQL 556
>gi|46136807|ref|XP_390095.1| hypothetical protein FG09919.1 [Gibberella zeae PH-1]
Length = 596
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 148/347 (42%), Gaps = 50/347 (14%)
Query: 240 GDGGMADSDDDGAPGSGRPTYD-------------DIKEITIRRSKLAKWFMEPFFEELI 286
GD G DSDDD G PT D D + + R++ A+ P FE+ I
Sbjct: 218 GDSGAEDSDDDYNRGRS-PTPDVDEARDQPPAELRDYDRVRLGRNEFAQVCFHPGFEQGI 276
Query: 287 VGCFVRVGIGRSKNGPI--YRLCMVRNVDATEPDRSYKLEN----RTTCKYLNVTWGNES 340
+GC++R+ +G I YR+ +++ + P Y ++ T +Y+ G
Sbjct: 277 IGCYIRIALGPHPETGIEQYRMAVIKGFSTSRP---YAIQGPQGVLVTDQYVKAAHGK-- 331
Query: 341 SAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKESIQKINTFVYSAATV 400
+ + S + E ++ +P+K + +K + I ++ +++ +
Sbjct: 332 AIKEFPFIAASSGKFTDSELNRYKVTCHNEGVTLPTKAYLTDKVDDINRLINHSWTSEEI 391
Query: 401 KQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKRLQELEASR------ 454
K L + S R + AE++R+ + L+ A+ R D+ E +++ L L + R
Sbjct: 392 KTRLA-RISDLKRRFD-PAERERIAKLLDEARQRGDDDRAEELQEELDNLGSQRLAFRTS 449
Query: 455 ------DSKVKDAKAIRLAEMNRKNRVEN--------FKNASELKRVNTSLKAGEAGYDP 500
+ ++ RLAE NR+NR N K ++ K + +LK GE
Sbjct: 450 LGSKHSEEPKAQSEQDRLAERNRENRRLNAEAVRKAQLKEKAKSKEIEAALKRGETYQGD 509
Query: 501 FSRRWTRSRNYYISKPGEEV--TAEANGDKNGVPGGANGEEGATGEV 545
SRR R++ ++ E+V + ANG+ G PG + + A ++
Sbjct: 510 MSRRL-RTKAKFVHDANEKVEQKSAANGNGAGTPGNSTSKSAAKSQL 555
>gi|85085889|ref|XP_957595.1| hypothetical protein NCU03956 [Neurospora crassa OR74A]
gi|28918688|gb|EAA28359.1| predicted protein [Neurospora crassa OR74A]
gi|40882327|emb|CAF06149.1| related to Pol II transcription elongation factor [Neurospora
crassa]
Length = 601
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 136/295 (46%), Gaps = 31/295 (10%)
Query: 262 DIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNG--PIYRLCMVRNVDATEPDR 319
D + + + RS+ A+ P F+E + GCFVR+ IG + +YR+ +++ +
Sbjct: 256 DFERVRVGRSRFAEVAFYPGFDEALTGCFVRLNIGPDPDTRQDVYRMALIKGFTTG---K 312
Query: 320 SYKLENRTTCKY---LNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPS 376
+Y LE+ + + V + + W + SD E E+ ++ + P
Sbjct: 313 AYALEDHQGHQMVVDMYVKAAHGKAVREWPLITCSDRKFTEAEYNRYKQVCLAEGVPFPD 372
Query: 377 KQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHD 436
KQ +++K + I ++ ++ + L+ + + ++ A+++ L+++L++A+ +D
Sbjct: 373 KQTLVDKIDDINRLVQRTWTEQELSDKLKRQNALQAK--FSGAQREYLKKQLDIARQAND 430
Query: 437 EVDMERIKKRLQELEASR----------DSKVKDAKAIRLAEMNRKNRVEN--------F 478
E + R ++RL++LE R D K + + +LA N +NR N
Sbjct: 431 EAAIARYQERLEKLEVPRLAFRTSLTKKDGKKELTQQEKLALKNMENRRRNAEEVRKAQL 490
Query: 479 KNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPG 533
+ ++ +++ ++ GEA + SRR +R ++ E+ T + K G P
Sbjct: 491 RERAKARQIERKIERGEAVQEDMSRRLI-TRPKFVHDSSEKATPSPS--KAGTPA 542
>gi|390605144|gb|EIN14535.1| plus-3-domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 577
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 170/378 (44%), Gaps = 65/378 (17%)
Query: 55 RKPSGSQVPLKKRLDPAERDDDQGSQEEGDYDGGASEHEGDSSNESDDDNHGQMTELERE 114
R+ +G +V +++ D ++ +D EE D EG +E+D D+ ++TE+ERE
Sbjct: 26 RQNAGLKVGKRRKADVSDDSEDAPESEEDDIKLNPYPLEGKYKDEADRDHLLELTEMERE 85
Query: 115 MMIFERDDKKVDKNLRDKFRSRREERSTRSTKETPPLPSSRSARLAARSADRAAAKDDAL 174
++ R ++ + ++DK RS + + SS + + A R A + ++ L
Sbjct: 86 EILASRLEEL--QRIQDK-RSLEALVKAQKSGAAEDAKSSGTGQHAVRGATKEKSR--KL 140
Query: 175 NELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSPVKRKAFTPAGLSSSSQSESESRSHSD 234
+EL+AKR R D R GS P + ++ +P + SS SD
Sbjct: 141 DELKAKR---------RAKDDKKRTKPGS----PKRDRSASPTDMEMSS---------SD 178
Query: 235 DEGSTGDGGMADSDD----------DGAPGSGRP--------TYDDIKEITIRRSKLAKW 276
DE DG + D+ D P + T D+ + R +AK
Sbjct: 179 DE----DGQITKLDEAEERRRRFYRDYGPSKKKKEDDDDDELTRLDLAICRVTRDMIAKH 234
Query: 277 FMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNV--DATEPDRSYKLENRTTCKYLNV 334
M P+FE+ I G +VR IG+ PIYR+C V+N+ D +P Y++ + + + +
Sbjct: 235 CMAPWFEDWITGSWVRYLIGQENGLPIYRICEVQNLGADLVKP---YRVNDVPVNQSIEL 291
Query: 335 TWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKESIQKINTFV 394
G S W M VS++ + EF + + + ++P K+D+ +K ++K+
Sbjct: 292 KHGK--STKTWTMDKVSNADWNDREFDRLVAVCKAEGVKLPRKRDLEKKHAQMKKL---- 345
Query: 395 YSAATVKQMLQEKKSASS 412
V+Q + E +SA+S
Sbjct: 346 -----VEQPVTEARSAAS 358
>gi|340939471|gb|EGS20093.1| RNA polymerase-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 689
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 101/200 (50%), Gaps = 14/200 (7%)
Query: 262 DIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIG--RSKNGPIYRLCMVRNVDATEPDR 319
DI+ + + RS+ A + P FE+ ++GCFVR+ IG + +YR+ +++ P
Sbjct: 305 DIERVRVGRSRFADYCFHPLFEQAMIGCFVRINIGPDPATRQEVYRMAVIKGFSKGRP-- 362
Query: 320 SYKLENRTTCKYLNVTW--GNESSAAR-WQMAMVSDSPPLEEEFKQWLREVERNSGRMPS 376
Y + + + + T+ A R W S++ E EF ++ + P+
Sbjct: 363 -YAIPDHSGHPMVVDTYVKAAHGKAQRDWPFISCSNNKFTEAEFNRYKQVCLAEGVPFPT 421
Query: 377 KQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSR--PLNVAAEKDRLRRELEVAQSR 434
K +++ K + I ++ +V++ + + L+ + ++ P +++ ++++LE+A++R
Sbjct: 422 KDELISKIDDINRMVNYVWTDEELNEKLRRVREMHAKYGPF----QREAVQKQLELARAR 477
Query: 435 HDEVDMERIKKRLQELEASR 454
DE + R+++RL LE R
Sbjct: 478 GDEEAVARLQERLDSLEVPR 497
>gi|406860668|gb|EKD13725.1| RNA polymerase 2 transcription elongation factor [Marssonina
brunnea f. sp. 'multigermtubi' MB_m1]
Length = 612
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 120/252 (47%), Gaps = 35/252 (13%)
Query: 262 DIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGR-SKNG-PIYRLCMVRNVDATEPDR 319
DI+ + + RS A+ P F+E I G +VR+ +G+ K G IYR+ +V+ DR
Sbjct: 268 DIQRVRVGRSSFAQVCFYPGFDEAITGTYVRISVGQDDKTGNNIYRMGLVKGF---VEDR 324
Query: 320 SYKLENRT-----TCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRM 374
Y +EN T +Y+ G + W SD P E E+ ++ + +
Sbjct: 325 PYAIENSNGKLFKTTQYVRAAHGK--AERNWPFISCSDQPFTEAEWNRYKQTCLVEGVPL 382
Query: 375 PSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLN--VAAEKDRLRRELEVAQ 432
P+K +++K +Q IN ++ + T + LQEK + S + + E++RL ++ A+
Sbjct: 383 PTKPKLIQK---VQDINALIHRSWTEAE-LQEKLTKSGALIQKFLPIERNRLNGLIKEAK 438
Query: 433 SRHDEVDMERIKKRLQELEAS--------RDSKVKDAKAI------RLAEMNRKNRVENF 478
+ ++ +E+ ++ L LE R S K + A RLA +NR+NR
Sbjct: 439 ANGNDAKVEQYQQELDALEVPKLAYGTSLRPSPKKSSVAPGMSQQDRLALLNRQNRA--- 495
Query: 479 KNASELKRVNTS 490
KNA E+++ +
Sbjct: 496 KNAEEVRQAQIN 507
>gi|195354115|ref|XP_002043546.1| GM16155 [Drosophila sechellia]
gi|194127693|gb|EDW49736.1| GM16155 [Drosophila sechellia]
Length = 437
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 97/185 (52%), Gaps = 10/185 (5%)
Query: 267 TIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRSYKLENR 326
++RS L +P F E ++G FVR+ +G+ IY C+ + + + Y+++ +
Sbjct: 109 VLKRSDLKNLLDKPIFAEAVIGSFVRLNVGK-----IY--CIYETIALHQDRKDYRVDGK 161
Query: 327 TTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKES 386
T L + +G+E +R + +VS+ P ++EF WL RN +P+ D+ +K+
Sbjct: 162 RTNLILVLRFGSEKRYSR--IDVVSNQPITQKEFLLWLETNLRNRCTLPTLNDIAKKQVQ 219
Query: 387 IQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKR 446
++ + Y+ V++++Q K+ A + N A K L E ++A +D ++ ++K+
Sbjct: 220 VKNAYKYSYTETDVEKLIQAKREAGIKQ-NAAYRKISLIIERDMAAGMNDVEKVQVLEKK 278
Query: 447 LQELE 451
+ E++
Sbjct: 279 ILEID 283
>gi|345562061|gb|EGX45133.1| hypothetical protein AOL_s00173g234 [Arthrobotrys oligospora ATCC
24927]
Length = 680
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 128/282 (45%), Gaps = 22/282 (7%)
Query: 254 GSGRPTYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGP-----IYRLCM 308
GS T+D++K + + R+ + K++ P FE GCFVRV IG N P IYRLC
Sbjct: 336 GSEEATFDEVKLLMVTRNTITKYWTYPNFETATAGCFVRVSIG---NHPDTGKLIYRLCQ 392
Query: 309 VRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVE 368
+++ ++ +RT N ++ ++ ++SDS P E+E++ ++ +E
Sbjct: 393 IKDWQDSKSIYEVSSGDRTIKFRRNAIIATGAAEKPTRVDVISDSHPTEDEWRWYIGAME 452
Query: 369 RNSGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKS-ASSRPLNVAAEKDRLRRE 427
+ P + K++ ++ + T + M + + S P+ + L+R
Sbjct: 453 VAKLKRPDVAFIERKRKDVKNLITHQLTNEDFDAMRRMRTSYYPDDPVIPNLDLPSLKRR 512
Query: 428 LEVAQSRHDEVDMERIKKRLQELEASRDSKVKDAKAIR---LAEMNRKNRVENFKN---- 480
+ DE ++ RI + L+ R ++ + L ++N++NR N ++
Sbjct: 513 RQQLVDEGDEPEILRIDRELEWRAPPRALTAALSRPTQLDVLGQINKRNRETNRQDIRKA 572
Query: 481 -ASELKRVNTSLK-AGEAG----YDPFSRRWTRSRNYYISKP 516
E KR + + A E G DPF+R T ++ Y+ KP
Sbjct: 573 QIEEKKRNEIAARMAAENGDSSFMDPFARVKTHAKIYHNEKP 614
>gi|336466374|gb|EGO54539.1| hypothetical protein NEUTE1DRAFT_124773 [Neurospora tetrasperma
FGSC 2508]
gi|350286761|gb|EGZ68008.1| plus-3-domain-containing protein [Neurospora tetrasperma FGSC 2509]
Length = 601
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 136/295 (46%), Gaps = 33/295 (11%)
Query: 262 DIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNG--PIYRLCMVRNVDATEPDR 319
D + + + RS+ A+ P F+E + GCFVR+ IG + +YR+ +++ +
Sbjct: 256 DFERVRVGRSRFAEVAFYPGFDEALTGCFVRLNIGPDPDTRQDVYRMALIKGFTTG---K 312
Query: 320 SYKLENRTTCKY---LNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPS 376
+Y LE+ + + V + + W + SD E E+ ++ + P
Sbjct: 313 AYALEDHQGHQMVVDMYVKAAHGKAVREWPLITCSDRKFTEAEYNRYKQVCLAEGVPFPD 372
Query: 377 KQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVA-AEKDRLRRELEVAQSRH 435
KQ +++K I IN V T +++ + K ++ + A+++ L+++L++A+ +
Sbjct: 373 KQTLVDK---INDINRLVQRTWTEQELSDKLKRQNALQAKFSGAQREYLKKQLDIARQAN 429
Query: 436 DEVDMERIKKRLQELEASR----------DSKVKDAKAIRLAEMNRKNRVEN-------- 477
DE + R ++RL++LE R D K + + +LA N +NR N
Sbjct: 430 DEAAIARYQERLEKLEVPRLAFRTSLTKKDGKKELTQQEKLALKNMENRRRNAEEVRKAQ 489
Query: 478 FKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVP 532
+ ++ +++ ++ GEA + SRR +R ++ E+ T + K G P
Sbjct: 490 LRERAKARQIERKIERGEAVQEDMSRRLI-TRPKFVHDSSEKATPSPS--KAGTP 541
>gi|291001841|ref|XP_002683487.1| predicted protein [Naegleria gruberi]
gi|284097116|gb|EFC50743.1| predicted protein [Naegleria gruberi]
Length = 928
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 78/152 (51%), Gaps = 10/152 (6%)
Query: 231 SHSDDEGSTGDGGMADSDDDGAPGSGRPTYDDIKEITIRRSKLAKWFMEPFFEELIVGCF 290
S +D+ GDG SD++ + T DI+ I IRRS L K F EP+F + F
Sbjct: 760 SDEEDQNIFGDG----SDNEEESSKCKITKKDIERILIRRSALEKEFKEPYFASSVEKAF 815
Query: 291 VRVGIGRSKNG--PIYRLCMVRNVDATEPDRSYKLEN-RTTCKYLNVTWGNESSAARWQM 347
VRV +G ++ YRLC + V D + N T K L + +G + WQM
Sbjct: 816 VRVLVGFNERAKKKTYRLCQIIQVQDMTKDYLFGTNNSEKTKKGLLLKFGVQKRT--WQM 873
Query: 348 AMVSDSPPLEE-EFKQWLREVERNSGRMPSKQ 378
+ +SD+ +EE E+K W E+E+ + + P+++
Sbjct: 874 SAISDNKEIEENEYKAWKAEMEKVNEKFPTRK 905
>gi|195580739|ref|XP_002080192.1| GD24344 [Drosophila simulans]
gi|194192201|gb|EDX05777.1| GD24344 [Drosophila simulans]
Length = 437
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 97/185 (52%), Gaps = 10/185 (5%)
Query: 267 TIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRSYKLENR 326
++RS + +P F E ++G FVR+ +G+ IY C+ + + + Y+++ +
Sbjct: 109 VLKRSDIKNLLDKPIFAEAVIGSFVRLNVGK-----IY--CIYETIALHQDRKDYRVDGK 161
Query: 327 TTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKES 386
T L + +G+E +R + +VS+ P ++EF WL RN +P+ D+ +K+
Sbjct: 162 RTNLILVLRFGSEKRYSR--IDVVSNQPITQKEFLVWLESNLRNRCTLPTLNDIAKKQVQ 219
Query: 387 IQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKR 446
++ + Y+ V++++Q K+ A + N A K L E ++A +D ++ ++K+
Sbjct: 220 VKNACKYSYTETDVEKLIQAKREAGKKQ-NAAYRKISLIIERDMAAGMNDVEKVQVLEKK 278
Query: 447 LQELE 451
+ E++
Sbjct: 279 ILEID 283
>gi|323449838|gb|EGB05723.1| hypothetical protein AURANDRAFT_72169 [Aureococcus anophagefferens]
Length = 675
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 77/153 (50%), Gaps = 17/153 (11%)
Query: 247 SDDDGAPGSGRPTYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGR--------- 297
SDDD AP + ++ + RS L KW EPFFE+ +VGCFVR+G+G+
Sbjct: 190 SDDDDAPHVA---CSALGKLRLPRSLLEKWVEEPFFEKAVVGCFVRLGVGKIPASPSKAP 246
Query: 298 -SKNGPIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPL 356
++ P Y++C + +VD E +Y T K L + G W+M+++S+
Sbjct: 247 GARGEPQYKVCEIISVD--EYKHAYPFGEFETRKALMLRIGRNQRL--WRMSVISNHRFT 302
Query: 357 EEEFKQWLREVERNSGRMPSKQDVLEKKESIQK 389
+ E ++W + ++PS ++ +K ++K
Sbjct: 303 DAELQEWQSIMRTERQKIPSVIEINRRKAQMRK 335
>gi|170095077|ref|XP_001878759.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646063|gb|EDR10309.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 540
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 94/409 (22%), Positives = 179/409 (43%), Gaps = 55/409 (13%)
Query: 93 EGDSSNESDDDNHGQMTELEREMMIFERDDKKVDKNLRDKFRSRREERSTRSTKETPPLP 152
EG +E+D +M E RE ++ ER +KK N + K +RS +
Sbjct: 67 EGQYKDEADRQRLLEMPETAREEILAERSEKKQRLNEQQKLADLLNQRSA--------VG 118
Query: 153 SSRSARLAARSAD-RAAAKDDA--LNELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSPV 209
+ A+ A R R A K+ L+EL+A+R K +D R SP
Sbjct: 119 ADSVAKAAKRQHTVRGATKEKTRKLDELKARR-KAKD--------------EKKRNTSPK 163
Query: 210 KRKAFTPAGLSSSSQSESESRSHSDDEGSTGDGGMA--DSDDDGAPGSGRPTYDDIKEIT 267
+ ++ +P + S + + + D+ + + ++ D P T +
Sbjct: 164 RDRSSSPMDMEISDEESEDGQITKQDQEEEKERRLLGKTAEPDNTPS----TLQHFESCR 219
Query: 268 IRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRSYKLENRT 327
+ R LAK+ M P+F+E + G +VR IG+ P+YR+C + ++ A E + YK+ ++
Sbjct: 220 LSRDTLAKYCMAPWFQEYVRGAWVRYLIGQEAGQPVYRMCEIADLSA-EAVKPYKVNDKL 278
Query: 328 TCKYLNVTWGNESSAARWQMAMVSDSPPLE-----------------EEFKQWLREVERN 370
+ ++ G S + M VS+ P +E +EF + ++
Sbjct: 279 VNQVFDLKHGK--SIRSFNMDKVSNGPFIEASFFLFMARGICDLLLQKEFDRLVKVYAAE 336
Query: 371 SGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSA-SSRPLNVAA-EKDRLRREL 428
++P+K + +K +QK+ + + + + MLQ + +++P ++ E+ RL +
Sbjct: 337 DVKLPTKLHLEQKVAQLQKLISQPVTESDISAMLQRRNQVQNNKPTGMSTLERSRLTQAR 396
Query: 429 EVAQSRHDEVDMERIKKRLQELEASRDSKVKDAKAIRLAEMNRKNRVEN 477
+A RHD +++ I +L E +A + LA++N +NR N
Sbjct: 397 TLAMRRHDYDEVKDIDIQLAAAEIVTAPARVEAVDV-LAKVNERNRKAN 444
>gi|452844378|gb|EME46312.1| hypothetical protein DOTSEDRAFT_70340 [Dothistroma septosporum
NZE10]
Length = 618
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 107/234 (45%), Gaps = 27/234 (11%)
Query: 262 DIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSK-NGP-IYRLCMVRNVDATEPDR 319
D + + RS A P FEE I GCF R+ IG ++ NG +YR+ +R +P
Sbjct: 269 DFERCRVGRSNFASVCFYPSFEESIKGCFARISIGPNRENGQNMYRMTQIRGFTDGKP-- 326
Query: 320 SYKLENR-----TTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRM 374
Y+LEN TT +Y V G A W + SD E EF ++ +++++ M
Sbjct: 327 -YQLENAHGKQFTTDQYAIVAHGAAEKA--WPFSACSDGKFNEAEFTRFRETLQKDNINM 383
Query: 375 PSKQDVLEKKESIQKI--NTFVYSAATVKQMLQEKKSASSRPLNVAAE--KDRLRRELEV 430
PS++ + K ++I + F + +K Q P+++ + KD +R E
Sbjct: 384 PSRRFLTGKLDAIHSLLNQKFTEDSLQIKFAKQRAMELKFDPVHIVKQKRKDIAKRRAEA 443
Query: 431 AQSRHDEVDMERIKKRLQELEASRDS-----KVKDAKAI-----RLAEMNRKNR 474
Q DE ++ R L+ L+ S S KVK A A RLA++N NR
Sbjct: 444 KQI-GDEEEIARCDSELEALDNSAASTNGAAKVKPAIAKAAPHDRLAQLNHTNR 496
>gi|358368630|dbj|GAA85246.1| RNA polymerase II transcription elongation factor Rtf1 [Aspergillus
kawachii IFO 4308]
Length = 604
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 159/356 (44%), Gaps = 48/356 (13%)
Query: 262 DIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIG--RSKNGPIYRLCMVRNVDATEPDR 319
DI+ + RS A+ P F++ I GC+ RV IG R YRLC+++ +P
Sbjct: 268 DIQRTRVGRSNFAQVCFYPGFDDAISGCYARVNIGPNRETGQNEYRLCLIKRFSEGKP-- 325
Query: 320 SYKLENR-----TTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRM 374
Y +E + T +Y + G + + SDSP E EF ++ + + +M
Sbjct: 326 -YAMEGQNGRSFVTNQYAVLAHG--KAEREFPFVACSDSPFTEAEFNRYRQTMAVEDCKM 382
Query: 375 PSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSR 434
+K V K I ++ ++ + + L+++ S ++ ++ + ++L++A+
Sbjct: 383 ATKSMVANKVTDINRLLNHKFTNEELNEKLRKQGSLDTKYKFF--KRVDIEKQLKLAREA 440
Query: 435 HDEVDMERIKKRLQELEASR-------DSKV-KDAKAIRLAEMNRKNR---VENFKNAS- 482
D+ +MER++ L + + +V K ++ RLAE+N +N+ +EN + A
Sbjct: 441 GDDAEMERLEAELASMATPKLAVGSHPKPRVDKPSEHERLAELNLRNQKLNIENVRRAQI 500
Query: 483 ----ELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKNGVPGGANG- 537
++ ++ GEA ++PF R T++R +Y + NG NG P N
Sbjct: 501 EERKASRKAAAAVARGEAAHNPFMRVRTQARTHY----------DVNG--NGTPTENNAS 548
Query: 538 EEGATGEVGMAATEAALEAAAGAGKL-----VDTNAPLDLGTESNMLHDFELDISL 588
+E E A+ A AG+ K V + ++ E+ D ELDI +
Sbjct: 549 QENTASETPSKASTPASGTPAGSQKKTSKGGVASIRHRNMDDENIAALDLELDIEI 604
>gi|169783258|ref|XP_001826091.1| RNA polymerase II transcription elongation factor Rtf1p
[Aspergillus oryzae RIB40]
gi|83774835|dbj|BAE64958.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391864992|gb|EIT74284.1| Paf1/RNA polymerase II complex, RTF1 component [Aspergillus oryzae
3.042]
Length = 612
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 138/316 (43%), Gaps = 43/316 (13%)
Query: 262 DIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIG--RSKNGPIYRLCMVRNVDATEPDR 319
DI+ + R+ A+ P F++ I GC+ RV IG R YRLC+++ P
Sbjct: 271 DIQRARVGRTNFAQVCFYPGFDDAISGCYARVNIGPNRETGQNEYRLCLIKKFTEGRP-- 328
Query: 320 SYKLE-----NRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRM 374
Y +E + T +Y + G + + SDS E EF ++ + + +M
Sbjct: 329 -YSMEGPNGRSFVTKQYAVLAHGK--AEREFPFVACSDSAITEAEFNRYRQTMAVEDCKM 385
Query: 375 PSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSR 434
+K V EK I ++ ++ + + L+++ S ++ + ++ ++L++A++
Sbjct: 386 ATKSTVAEKVVDINRLLNHKFTPEELTEKLRKQGSLDTK--STVFKRMETEKKLKLAKAA 443
Query: 435 HDEVDMERIKKRLQELE---------ASRDSKVKDAKAIRLAEMNRKNRVENFKNA--SE 483
D+ ++ER++ L + +S+ K ++ RL E+N +N+ N +N ++
Sbjct: 444 GDDAEVERLESELASMSTPKLAFNATSSKPRADKPSEHERLLELNLRNQRLNTENVRRAQ 503
Query: 484 LKR------VNTSLKAGEAGYDPFSRRWTRSRNYY------------ISKPGEEVTAEAN 525
L+ ++ GEA +PF R T +R +Y ++ G T
Sbjct: 504 LEERKASRKAAAAVARGEAQPNPFMRVRTHARTHYDANGNGTTLSETTTRDGTPATGSDT 563
Query: 526 GDKNGVPGGANGEEGA 541
K P G+N G+
Sbjct: 564 PSKANTPNGSNPPSGS 579
>gi|195443328|ref|XP_002069369.1| GK18719 [Drosophila willistoni]
gi|194165454|gb|EDW80355.1| GK18719 [Drosophila willistoni]
Length = 417
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 101/195 (51%), Gaps = 6/195 (3%)
Query: 259 TYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRS--KNGPIYRLCMVRNVDATE 316
T ++++ + RS+L + +P F E I CFVRV +G +YR+ + ++ ++
Sbjct: 101 TLNELRRAVLTRSQLESFLDKPIFGETITNCFVRVNVGLPGIHMNQVYRISQIVGLEHSK 160
Query: 317 PDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPS 376
R Y+L ++ T L + N QM +VS+ P + EF W+ +R + +P
Sbjct: 161 --REYRLGSQNTSFILKL--RNAGQYVYSQMDVVSNQPVTQHEFDVWIGACQREACPLPQ 216
Query: 377 KQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHD 436
+ EK+++I++ + + ++ +++++Q K + ++ A +K L E ++A +D
Sbjct: 217 LAIIEEKQKAIKEASNYSFTEREIEKIIQSKLKDGKKKVSTACQKVCLIMERDMAVDWND 276
Query: 437 EVDMERIKKRLQELE 451
R++K+++ +E
Sbjct: 277 LKTANRLEKKIRTME 291
>gi|328351120|emb|CCA37520.1| RNA polymerase-associated protein RTF1 homolog [Komagataella
pastoris CBS 7435]
Length = 514
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 129/262 (49%), Gaps = 10/262 (3%)
Query: 259 TYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNG-PIYRLCMVRNVDATEP 317
T DI +I R+ ++K++ P F++++ G ++R+ G NG Y++ V +
Sbjct: 197 TLSDINKIIFGRTAMSKYWYYPEFDDVVKGMYLRLNTGSGGNGFSPYKVVEVLGSQRIKG 256
Query: 318 DRSYKLENR-TTC-KYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMP 375
+Y L ++ C YL V + N+ R + + SDS EF +LRE++ +
Sbjct: 257 S-AYGLNSKENNCDMYLKVAFPNQKEMVR-PLFVFSDSSITHPEFDLFLRELDAEGLSVM 314
Query: 376 SKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRP-LNVAAEKDRLRRELEVAQSR 434
+DV K ++++++ S V +++ K+S SS N +K +L+ ELE A+
Sbjct: 315 DLRDVDYKYHQLKEMSSRSLSNDEVNSIVKMKQSLSSNTGFNTVLKKAQLQEELEEARDA 374
Query: 435 HDEVDMERIKKRLQELEASRDSKVKDAKAIRLAEMNRKNRVEN--FKNASELKRVNTSLK 492
HD + RI+ L+ + A +S V + + +++++N+ N F +E+ V
Sbjct: 375 HDHERVARIEAELKSIGA--ESVVASKASSSMLKIDQRNKKLNNRFIRKAEMAAVEKRKL 432
Query: 493 AGEAGYDPFSRRWTRSRNYYIS 514
G + DPF R T +R +Y S
Sbjct: 433 RGTSESDPFYRLATTARMFYKS 454
>gi|194766101|ref|XP_001965163.1| GF21518 [Drosophila ananassae]
gi|190617773|gb|EDV33297.1| GF21518 [Drosophila ananassae]
Length = 587
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 98/196 (50%), Gaps = 4/196 (2%)
Query: 267 TIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRSYKLENR 326
+ R +L +P FE+ +V CFVRV IG + R+ + V + ++ Y+L +
Sbjct: 254 ILTRVQLESLLDKPVFEKTVVDCFVRVNIGSEGSANASRIYQI--VGLQQDNKDYQLGGK 311
Query: 327 TTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKES 386
T L + +G + + M +VS+ P + EF W +R+ +P + +K+E
Sbjct: 312 RTNIVLRLRYGVQERLSL--MDVVSNQPVTKYEFYMWSGTWQRDLKALPLLSQIAKKQED 369
Query: 387 IQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKR 446
I + Y+ V++++Q K+ A+ + + A +K L E + A +D ++R++K+
Sbjct: 370 IANAMEYSYTEGDVEKIIQSKRQAAPKRVTSAYKKVCLIMERDQAVGLNDMEKVKRLEKQ 429
Query: 447 LQELEASRDSKVKDAK 462
+QEL+ ++ AK
Sbjct: 430 IQELDGPSGGQLDSAK 445
>gi|195117039|ref|XP_002003058.1| GI17712 [Drosophila mojavensis]
gi|193913633|gb|EDW12500.1| GI17712 [Drosophila mojavensis]
Length = 457
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 88/180 (48%), Gaps = 7/180 (3%)
Query: 232 HSDDEGSTGDGGMAD-SDDDGAPGSGRPTYDDIKEITIRRSKLAKWFMEPFFEELIVGCF 290
+SD+ + D G D S + P + + ++ + + R++L +P FE+ ++GCF
Sbjct: 134 YSDESNVSSDEGYMDASHESSEPETFVSSLAELSKALLTRNQLESLLDKPNFEQTLIGCF 193
Query: 291 VRVGIGR-SKNGP-IYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMA 348
VR+ + N P +YRL + V+ T D+ Y L N T L + G + R M
Sbjct: 194 VRINLSSIPTNQPAVYRLSRIVAVEHT--DQEYVLGNHRTKVKLQLKHGRHLHSFR--MD 249
Query: 349 MVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKK 408
+S+ P L+ EF WL +R + +PS + K++ I++ + + + M+Q K+
Sbjct: 250 GISNQPVLDNEFLLWLDACQRVAQPLPSVNSINRKEKDIERALNYCLTEGDAELMVQTKR 309
>gi|115398640|ref|XP_001214909.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114191792|gb|EAU33492.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 607
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 141/299 (47%), Gaps = 35/299 (11%)
Query: 262 DIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIG--RSKNGPIYRLCMVRNVDATEPDR 319
DI+ + RS A+ P F+E I GC+ RV IG R YRLC+++ P
Sbjct: 270 DIQRARVGRSNFAQVCFYPGFDEAISGCYARVNIGPNRDTGQNEYRLCLIKKFTEGRP-- 327
Query: 320 SYKLE-----NRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRM 374
Y +E + T +Y + G + + SDSP E EF ++ + + ++
Sbjct: 328 -YSMEGPNGRSFVTNQYAVLAHGK--AEREFPFIACSDSPFTEAEFNRYRQTMAVEDCKI 384
Query: 375 PSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSR 434
+K + EK I ++ ++ + + L+++ S ++ + ++ L R++++A++
Sbjct: 385 ATKSVLAEKVADINRLLNHKFTKEELNEKLRKQGSFDTKAMFF--KRVELERQIKLAKAA 442
Query: 435 HDEVDMERIKKRLQELE---------ASRDSKVKDAKAIRLAEMNRKNRVENFKNA---- 481
++ ++E++++ L+ L +S+ + ++ RL E+N +N+ N++N
Sbjct: 443 GEDAEVEKLEEELRSLSTPKLAFSSGSSKPRPSQTSEHERLLELNLRNQKLNYENVRRAQ 502
Query: 482 ----SELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEAN---GDKNGVPG 533
++ ++ GEA +PF R T +R +Y + G +T ++ ++G PG
Sbjct: 503 LEERRAGRKAAAAVARGEAAANPFLRVRTHARTHYDAN-GNSLTPKSEDTGASRDGTPG 560
>gi|326436130|gb|EGD81700.1| hypothetical protein PTSG_02413 [Salpingoeca sp. ATCC 50818]
Length = 645
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 147/322 (45%), Gaps = 52/322 (16%)
Query: 259 TYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNG-PIYRLCMVRNVDATEP 317
T + ++ I R+KL +W E F E G VR+ +G S+ G YRL + V E
Sbjct: 192 TLEQLESIRATRTKLLEWCHEAHFPETAAGMMVRINLGESQPGVSTYRLGQIVRV---EE 248
Query: 318 DRSYKL----ENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGR 373
R Y+L E T Y+ V G S ++M+ VS+ P L++EF +W +E+++
Sbjct: 249 KRLYELRDGRERTKTRFYVLVQHGR--SRRPFRMSFVSNGPILQKEFMKWQAAIEKDNMA 306
Query: 374 MPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQS 433
P+ DV K+ ++ + T V + + ++ K+ N+A E D LR E+ Q+
Sbjct: 307 FPTADDVSRKRAELEALKTRVRTGEDILYTIESKRKCECATTNLAREIDGLRLEMHRVQA 366
Query: 434 RHDEVDMERIKKR--LQELE-----ASRDSKVKDAKAIR--LAEMNRK--------NRVE 476
+E + + ++R L++ E + + + A A+R + + R+ +R+E
Sbjct: 367 SKEEKEQKLSERRAALRQEENYDDDDVAEDEDEQATALRDEIQALTRRETDIVDTIDRLE 426
Query: 477 NFKNA-SELKRVNT---------SLKAGEAGYDPFSRRWTRSRNY--------YISKPGE 518
K + +E +R NT +++A + S R TR+R+ SK G
Sbjct: 427 RKKQSEAERRRANTFDTNKLNERNIRAEKLQRKLLSER-TRTRDADDVFQRRRAFSKKGR 485
Query: 519 EVTAEANG------DKNGVPGG 534
+ A +N DK+ + GG
Sbjct: 486 NLNATSNAKGKDSQDKDKIEGG 507
>gi|126030146|pdb|2BZE|A Chain A, Nmr Structure Of Human Rtf1 Plus3 Domain
Length = 153
Score = 69.3 bits (168), Expect = 6e-09, Method: Composition-based stats.
Identities = 38/129 (29%), Positives = 68/129 (52%), Gaps = 4/129 (3%)
Query: 261 DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRS 320
+++ + + R KL +W PFF + + GCFVR+GIG + P+YR+ + V E +
Sbjct: 26 EELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAEITGV--VETAKV 83
Query: 321 YKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDV 380
Y+L T K L + GN+ R + VS+ E EF +W + ++P+ ++
Sbjct: 84 YQLGGTRTNKGLQLRHGNDQRVFR--LEFVSNQEFTESEFMKWKEAMFSAGMQLPTLDEI 141
Query: 381 LEKKESIQK 389
+K+ SI++
Sbjct: 142 NKKELSIKE 150
>gi|407921407|gb|EKG14556.1| Plus-3 [Macrophomina phaseolina MS6]
Length = 434
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 59/135 (43%), Gaps = 2/135 (1%)
Query: 258 PTYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIG--RSKNGPIYRLCMVRNVDAT 315
P D + + + RS AK P FE ++GCF RV IG +S +YR+C ++
Sbjct: 159 PELKDFERVRVGRSNFAKVCFYPGFEHYLIGCFARVSIGLDKSTGQGVYRMCQIKGFTEG 218
Query: 316 EPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMP 375
P N+ + V + + W M SDS E EF +W E ++P
Sbjct: 219 APYTMQGSNNKPVKTDIYVLVAHGKAEKEWPFVMCSDSKFTESEFNRWKSVCESEGVKIP 278
Query: 376 SKQDVLEKKESIQKI 390
++ + + ESI +
Sbjct: 279 TRSKLNSRLESIHAL 293
>gi|336372852|gb|EGO01191.1| hypothetical protein SERLA73DRAFT_167323 [Serpula lacrymans var.
lacrymans S7.3]
Length = 555
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 113/240 (47%), Gaps = 22/240 (9%)
Query: 259 TYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVR-------- 310
T + + + R LAK+ M P+FE+ + G +VR IG+ + P+YRLC ++
Sbjct: 212 TVETLNTCRLSRDMLAKYCMAPWFEDYVKGAWVRYLIGQEGSQPVYRLCEIQSTWYGHMY 271
Query: 311 --NVDATEPDRS------YKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQ 362
+V + D S YK+ ++T + ++ G S + M VS++P +EF++
Sbjct: 272 TVHVISIVKDLSANLVKPYKINDKTVNQSFDLKHGK--SVKSFTMEKVSNAPFDMKEFER 329
Query: 363 WLREVERNSGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLN---VAA 419
+ ++PS++ + +K + ++ T + + + ML K + + +
Sbjct: 330 LTKTCAAEETKLPSRRHLEKKSAQLARLITQPVTESDINAMLARKSQLQANKHSAGWITM 389
Query: 420 EKDRLRRELEVAQSRHDEVDMERIKKRLQELEASRDSKVKDAKAI-RLAEMNRKNRVENF 478
E+ RL + +A R D ++ I +L EL + + ++ RLA++N +NR N
Sbjct: 390 ERSRLTQARTLALRRQDYSEVADIDAKLAELPLPVNVREEEGTLNDRLAKVNERNRKANL 449
>gi|452983431|gb|EME83189.1| hypothetical protein MYCFIDRAFT_89173 [Pseudocercospora fijiensis
CIRAD86]
Length = 604
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 84/169 (49%), Gaps = 14/169 (8%)
Query: 262 DIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIG--RSKNGPIYRLCMVRNVDATEPDR 319
D I RS AK P FE+L+ GCF RV IG R +YR+ ++ +P
Sbjct: 263 DFDRCRIGRSAFAKVCFYPEFEKLVTGCFARVSIGLNRETGQNMYRMAQIKGFTVGKP-- 320
Query: 320 SYKLENR-----TTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRM 374
Y+LEN TT +Y V G +S W + SDS E EF ++ + + + R+
Sbjct: 321 -YQLENSAGKPFTTDQYAVVAQG--ASEKPWPFSACSDSKLTEVEFVRFKDTLNKENMRI 377
Query: 375 PSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSR--PLNVAAEK 421
PSK+ + +K + I ++ ++ ++++ ++++ + P++ A EK
Sbjct: 378 PSKRFLGKKLDDITQLLQTQFTEKSLQEKFAKQRAIQLKYDPVHQAREK 426
>gi|367040993|ref|XP_003650877.1| hypothetical protein THITE_2110787 [Thielavia terrestris NRRL 8126]
gi|346998138|gb|AEO64541.1| hypothetical protein THITE_2110787 [Thielavia terrestris NRRL 8126]
Length = 634
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 123/269 (45%), Gaps = 31/269 (11%)
Query: 262 DIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIG--RSKNGPIYRLCMVRNVDATEPDR 319
D++ + + RS+ A+ P FE+ I GCFVR+ IG + +YR+ +++ P
Sbjct: 271 DVERVRLGRSRFAEVCFYPGFEKAITGCFVRINIGPDPTTRQEVYRMAIIKGFTQGRP-- 328
Query: 320 SYKLENRTTCKY---LNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPS 376
Y + + + L V + + W SD E E+ ++ + +PS
Sbjct: 329 -YAIPDHSGHHMVVDLYVKAAHGKAQREWPFISCSDHRFTEAEWNRYKQVCLSEGVPVPS 387
Query: 377 KQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHD 436
K ++++K + I + ++ V + L+ + + ++ A++D L R+LE+A +R D
Sbjct: 388 KPELVDKIDDINGLLQRTWTEQEVTEKLRRQNALLAK--FSGADRDHLTRQLEMALARGD 445
Query: 437 EVDMERIKKRLQELE----ASRDSKVKDAKAI---------RLAEMNRKNR---VENFKN 480
+ +R+++RL LE A R S + K + +LA +N +NR E +
Sbjct: 446 QEAAKRLQERLDNLETPRLAFRTSLHPEKKKLESRGPTQQEKLAMLNAENRRRNAEAVRK 505
Query: 481 ASELKRVNT-----SLKAGEAGYDPFSRR 504
A ++R T L GE D SRR
Sbjct: 506 AQLMERARTREIEMRLNRGEQVEDDHSRR 534
>gi|320591924|gb|EFX04363.1| RNA polymerase 2 transcription elongation factor [Grosmannia
clavigera kw1407]
Length = 661
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/370 (21%), Positives = 156/370 (42%), Gaps = 57/370 (15%)
Query: 262 DIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNG--PIYRLCMVRNVDATEPDR 319
DI+ + + R++ ++ P F I G FVR+ IG P+YR+ +V+ +P
Sbjct: 299 DIERVRLSRTRFSQVCFYPGFNTAISGTFVRISIGPDPETREPVYRMALVKGFTKGKPYA 358
Query: 320 SYKLENR--TTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSK 377
++ + T +Y+ G + W SD P E E+ ++ + ++ +P K
Sbjct: 359 ITGVQGQLLVTDQYVQAAHGK--AQREWPFLACSDGPFTESEWTRYQKICHVDNVSIPKK 416
Query: 378 QDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDE 437
+L K + I K+ ++ + + +Q +++ +R V E+ +L ++ A++ +
Sbjct: 417 GILLNKADDINKLINRSWTEDELTEKVQRQQALKNRFNGV--ERMKLEYGIKDAKAHGNF 474
Query: 438 VDMERIKKRLQELEASRDSKVKDAKAI------------------RLAEMNRKNRVEN-- 477
V E++++ LQ LE R + + RLA++N +NR N
Sbjct: 475 VRAEQLQEELQHLETPRLAFKTSLTQVGQASNSSDQGSGGLSQQERLAQLNAENRRRNAE 534
Query: 478 ------FKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYI-------------SKPGE 518
K ++++ +N ++ GE + SRR R+R ++ S+P
Sbjct: 535 AVRKAQLKERAKVRAINRKIERGEEVEEDHSRR-VRTRAKFVHDVNDQGPEKKPASQPAS 593
Query: 519 EVTAEANGDKNGVPG-GANGEEGATGEVGMAATEAALEAAAGAGKLV------DTNAPLD 571
+ + A NG P GA G G + +A + +G + D A LD
Sbjct: 594 QAGSGATTPANGTPQLGAQNNGG--GLLHLAKLQQRPTTKSGLPTIHRPIVDDDIIASLD 651
Query: 572 LGTESNMLHD 581
L + N++ D
Sbjct: 652 LDIDENIMDD 661
>gi|342879007|gb|EGU80284.1| hypothetical protein FOXB_09211 [Fusarium oxysporum Fo5176]
Length = 596
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 110/471 (23%), Positives = 191/471 (40%), Gaps = 65/471 (13%)
Query: 108 MTELEREMMIFERDDKKVDKNLRDKFRSRREERSTRSTKETPPLPSSRSARLA-ARSADR 166
+ ELERE +I ER D + + R R+ S +E + RSA A DR
Sbjct: 117 LPELEREQLIAER---MTDIERQRQNRLLRQMVSNMENEERKQVKKKRSAGTAELEDGDR 173
Query: 167 AAAK--DDALNELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSPVKRKAFTPAGLSSSSQ 224
A++ ++ E L+Q E RR D R ++ ++P +S ++
Sbjct: 174 KASRPRTESKRETAMDSLRQAKAEKARRREDLER-----------RKDNYSPRRRNSGAE 222
Query: 225 SESESRSHSDDEGSTGDGGMADSDD--DGAPGSGRPTYDDIKEITIRRSKLAKWFMEPFF 282
SDD+ + G D+D+ D P R D + + + R++ A+ P F
Sbjct: 223 D-------SDDDYNRGRSPTPDADENRDQPPAELR----DYERVRLGRNEFAQVCFTPGF 271
Query: 283 EELIVGCFVRVGIGRSKNGPI--YRLCMVRNVDATEPDRSYKLENR----TTCKYLNVTW 336
E+ I GC++R+ +G I YR+ ++ + P Y L+ T +Y+
Sbjct: 272 EQAITGCYIRIALGPHPESGIEQYRMAAIKGFTTSRP---YALQGPNGAFVTDQYVKAAH 328
Query: 337 GNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKESIQKINTFVYS 396
G + + S E E ++ +PSK +++K + I + ++
Sbjct: 329 GK--AIKEFPFIAASSGKFTENELNRYKVTCHNEGVTLPSKAYLMDKIDEINGLINHSWT 386
Query: 397 AATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKRL--------- 447
+K L K R +E++R+ LE A+ R + E +++ L
Sbjct: 387 TEEIKARLARIKELKRR--FDPSERERIAHLLEEARQRGEHDKAEELQEELDNLGSQRLA 444
Query: 448 --QELEASRDSKVKDAKAI--RLAEMNRKNRVEN--------FKNASELKRVNTSLKAGE 495
L +S+ ++V A+ RLAE NR+NR N K ++ K + +LK GE
Sbjct: 445 FRTSLGSSKHNEVPKAQTEQDRLAERNRENRRLNAEAVRKAQLKEKAKSKEIEAALKRGE 504
Query: 496 AGYDPFSRRW-TRSRNYYISKPGEEVTAEANGDKNGVPGGANGEEGATGEV 545
SRR T+++ Y + E ANG PG + + A ++
Sbjct: 505 TYQGDMSRRLRTKAKFVYDANEKVEQKPAANGSGTNTPGTSTPKAAAKSQL 555
>gi|159164068|pdb|2DB9|A Chain A, Solution Structure Of The Plus-3 Domain Of Human Kiaa0252
Protein
Length = 149
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 67/128 (52%), Gaps = 4/128 (3%)
Query: 261 DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRS 320
+++ + + R KL +W PFF + + GCFVR+GIG + P+YR+ + V E +
Sbjct: 18 EELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAEITGV--VETAKV 75
Query: 321 YKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDV 380
Y+L T K L + GN+ R + VS+ E EF +W + ++P+ ++
Sbjct: 76 YQLGGTRTNKGLQLRHGNDQRVFR--LEFVSNQEFTESEFMKWKEAMFSAGMQLPTLDEI 133
Query: 381 LEKKESIQ 388
+K+ SI+
Sbjct: 134 NKKELSIK 141
>gi|383280264|pdb|3U1U|A Chain A, Crystal Structure Of Rna Polymerase-Associated Protein
Rtf1 Homolog Plus-3 Domain
gi|383280265|pdb|3U1U|B Chain B, Crystal Structure Of Rna Polymerase-Associated Protein
Rtf1 Homolog Plus-3 Domain
Length = 137
Score = 68.2 bits (165), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 4/129 (3%)
Query: 261 DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRS 320
+++ + + R KL +W PFF + + GCFVR+GIG + P+YR+ + V E +
Sbjct: 12 EELNRVRLSRHKLERWCHXPFFAKTVTGCFVRIGIGNHNSKPVYRVAEITGV--VETAKV 69
Query: 321 YKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDV 380
Y+L T K L + GN+ R + VS+ E EF +W ++P+ ++
Sbjct: 70 YQLGGTRTNKGLQLRHGNDQRVFR--LEFVSNQEFTESEFXKWKEAXFSAGXQLPTLDEI 127
Query: 381 LEKKESIQK 389
+K+ SI++
Sbjct: 128 NKKELSIKE 136
>gi|440637946|gb|ELR07865.1| hypothetical protein GMDG_02747 [Geomyces destructans 20631-21]
Length = 607
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 133/308 (43%), Gaps = 39/308 (12%)
Query: 233 SDDEGSTGDGGMADSD---DDGAPGSGR----PTYD------DIKEITIRRSKLAKWFME 279
S+ + S D G ADS+ DDG P R PT+ D+ +++I R+K AK
Sbjct: 221 SNHDQSDDDAG-ADSELEWDDGKPKHARSASPPTHSPPCELPDVHKVSIGRTKFAKLCFY 279
Query: 280 PFFEELIVGCFVRVGIGRSKNG--PIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWG 337
P FE+ G FVRV +G K +YR+ + + +P K +T VT
Sbjct: 280 PGFEDAYHGGFVRVSVGADKETGDNVYRMAQIMGFEEGKPYALEKENGQTFVTTQYVTAA 339
Query: 338 NESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKESIQKINTFVYSA 397
+ + W S+SP E E+K++++ +P+++ + + I + ++
Sbjct: 340 HGKAVRPWPFFTCSNSPITEAEYKRYMQTCLVEKVNVPTRRQLATQVGRIDALVNRSWTE 399
Query: 398 ATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKRLQELEA----- 452
A + + L+ + +++ +V ++++L + L A+ D E IK L LE
Sbjct: 400 AELTEKLRRSGALAAKYKSV--DRNKLNKRLNQAKLLGDVDRQEEIKAELAALEGPKLAF 457
Query: 453 ----SRDSKVKDAKAI----RLAEMNRKNRVEN--------FKNASELKRVNTSLKAGEA 496
+ KA+ RLA +N +NR +N + E +R+ ++ GE
Sbjct: 458 GTSLHKTPAQTGPKALSQQDRLAIINHENRRKNNEEIKAAQLREMREQRRIEAAIARGED 517
Query: 497 GYDPFSRR 504
SRR
Sbjct: 518 AVVDHSRR 525
>gi|406604121|emb|CCH44344.1| RNA polymerase-associated protein rtf1 [Wickerhamomyces ciferrii]
Length = 537
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 123/265 (46%), Gaps = 22/265 (8%)
Query: 262 DIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRSY 321
DI +I S K+ P F +IVG F ++ + + + +R+ + V +P Y
Sbjct: 222 DINKIKTGHSVAEKFCFYPGFSSVIVGTFGKIRVNKHE----HRMVRIEKVIHHKP---Y 274
Query: 322 KLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEF---KQWLREVERNSGR--MPS 376
L ++ T + V+ + + M+ SD P E EF Q++ + R +P+
Sbjct: 275 TLGSQKTDQQFVVSQPGKDKK-NFNMSFFSDEPITESEFSKYNQYINDANEAGKRAALPT 333
Query: 377 KQDVLEKKESIQKINTFVYSAATVKQMLQEKK--SASSRPLNVAAEKDRLRRELEVAQSR 434
+++ EK + ++ T + + ++ + + +S N +K L ++L+VA+ R
Sbjct: 334 LREIEEKYQELKTFATKKLEGSQFDEFIRRRSMFNDTSVGANYVLKKSELTQKLQVAKDR 393
Query: 435 HDEVDMERIKKRLQELEASRDSKVKDAKAI-----RLAEMNRKNRVENFKNASELKRVNT 489
HD + +RL++LE K+ +I + A++N +NR N K+ E + +NT
Sbjct: 394 HDTNAIRDYSERLRKLENHFQKSNKNKVSIGSNSDQFAKVNERNRKMNMKSVKEAELINT 453
Query: 490 SLKAGEA--GYDPFSRRWTRSRNYY 512
+ A DPF R TRSR YY
Sbjct: 454 EKRRTGALDKTDPFRRLNTRSRVYY 478
>gi|453086085|gb|EMF14127.1| plus-3-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 605
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 164/379 (43%), Gaps = 50/379 (13%)
Query: 130 RDKFRSRREERSTRSTKET---PPLPSSRSARLAARSADRAAAKDDALNELRAKRLKQQD 186
R++ ++R E TR T++ L SS +A R A A +D+ R K KQ
Sbjct: 137 REELLAQRAELVTRRTQDQLLKKALASSSAANKQKRKAAAADLEDNNRRTTRPKTEKQTA 196
Query: 187 PEAHRRLRDASRGGSGSRVLSPVKRKAFTPAGLSSSSQSESESRSHSDDEGSTGDGGMAD 246
+ +R+ R+ +G R+ S R+ +S S S D +G + A+
Sbjct: 197 LDTYRKARE-EKGAQRDRIASARDRR---------DERSPSSHGSERDADGESEVEWAAE 246
Query: 247 SDDDGAPGSGRPTYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIG--RSKNGPIY 304
+ P + D + RS AK P FEE I+G F RV IG R +Y
Sbjct: 247 PERKDEPPA---EITDFNYARMGRSGFAKVCFYPGFEEAIMGSFARVAIGPNRETGQSMY 303
Query: 305 RLCMVRNVDATEPDRSYKLENR-----TTCKYLNVTWGNESSAARWQMAMVSDSPPLEEE 359
R+C ++ +P Y++ N TT +Y V G S+ W + SD + E
Sbjct: 304 RMCQIKGFTEGKP---YQMANSVGKPFTTDQYAIVAQG--SAEKPWPFSACSDGRFTDAE 358
Query: 360 FKQWLREVERNSGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSR--PLNV 417
+ +++ + + S ++PS++ + +K I+ + ++ + Q ++++ + P++
Sbjct: 359 YVRFMDTLRKESIKVPSRRFLHKKVAEIKGLLDMQFTEEMLNQKFSKQRAIQLKYDPVHQ 418
Query: 418 A--AEKDRLRRELEVAQSRHDEVDMERIKKRLQELE---------ASRDSKVKD----AK 462
A KD RR E Q+ DE +M R L+ LE + K KD AK
Sbjct: 419 AKLKRKDIQRRRAEAEQN-MDEEEMARCDAELEALENGAANGGPKTAPKVKAKDHASPAK 477
Query: 463 AI----RLAEMNRKNRVEN 477
+ LA +NR+NR +N
Sbjct: 478 PVAQHESLAILNRQNRAKN 496
>gi|367030425|ref|XP_003664496.1| hypothetical protein MYCTH_2134860 [Myceliophthora thermophila ATCC
42464]
gi|347011766|gb|AEO59251.1| hypothetical protein MYCTH_2134860 [Myceliophthora thermophila ATCC
42464]
Length = 596
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 99/199 (49%), Gaps = 12/199 (6%)
Query: 262 DIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIG--RSKNGPIYRLCMVRNVDATEPDR 319
D++ + + R++ A+ P FEE I GC+VR+ IG + +YR+ +++ P
Sbjct: 272 DVERVRLGRTRFAEVCFYPGFEEAITGCYVRINIGPDPTTRQDVYRMAVIKGFTQGRP-- 329
Query: 320 SYKLENRTTCKY---LNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPS 376
Y + +R+ + + V + + W SD E E+ ++ + +P+
Sbjct: 330 -YAITDRSGHQIVVDMYVKAAHGKAQREWPFITCSDKAFTEAEWNRYKQVCLSEGIPVPT 388
Query: 377 KQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAA-EKDRLRRELEVAQSRH 435
K +++ K I IN + T +++ ++ K ++ + + E+D + ++LE+A++R
Sbjct: 389 KPELVAK---IADINGLIERTWTDQEVSEKLKRQNALHIKYSGIERDNVAKQLELARARG 445
Query: 436 DEVDMERIKKRLQELEASR 454
DE + R++++L LE R
Sbjct: 446 DEAAVARLQEKLDNLEVPR 464
>gi|336385692|gb|EGO26839.1| hypothetical protein SERLADRAFT_464355 [Serpula lacrymans var.
lacrymans S7.9]
Length = 478
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 113/240 (47%), Gaps = 22/240 (9%)
Query: 259 TYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVR-------- 310
T + + + R LAK+ M P+FE+ + G +VR IG+ + P+YRLC ++
Sbjct: 135 TVETLNTCRLSRDMLAKYCMAPWFEDYVKGAWVRYLIGQEGSQPVYRLCEIQSTWYGHMY 194
Query: 311 --NVDATEPDRS------YKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQ 362
+V + D S YK+ ++T + ++ G S + M VS++P +EF++
Sbjct: 195 TVHVISIVKDLSANLVKPYKINDKTVNQSFDLKHGK--SVKSFTMEKVSNAPFDMKEFER 252
Query: 363 WLREVERNSGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLN---VAA 419
+ ++PS++ + +K + ++ T + + + ML K + + +
Sbjct: 253 LTKTCAAEETKLPSRRHLEKKSAQLARLITQPVTESDINAMLARKSQLQANKHSAGWITM 312
Query: 420 EKDRLRRELEVAQSRHDEVDMERIKKRLQELEASRDSKVKDAKAI-RLAEMNRKNRVENF 478
E+ RL + +A R D ++ I +L EL + + ++ RLA++N +NR N
Sbjct: 313 ERSRLTQARTLALRRQDYSEVADIDAKLAELPLPVNVREEEGTLNDRLAKVNERNRKANL 372
>gi|156055230|ref|XP_001593539.1| hypothetical protein SS1G_04966 [Sclerotinia sclerotiorum 1980]
gi|154702751|gb|EDO02490.1| hypothetical protein SS1G_04966 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 627
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 110/234 (47%), Gaps = 24/234 (10%)
Query: 262 DIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSK--NGPIYRLCMVRNVDATEPDR 319
D++ + + RS+ A P F+E I GCFVRV IG K N +YR+ +V+ + D+
Sbjct: 284 DLERVRVGRSRFAMVCFYPGFDEAITGCFVRVNIGVDKETNQNLYRMGLVKGF---KEDK 340
Query: 320 SYKL-----ENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRM 374
Y + + +T +Y+ G S W SDS E E++++ + + +
Sbjct: 341 PYAMMSSNGKQFSTTQYVIAAHG--KSERSWPFIACSDSRFTEAEWQRYKQNCIADGIPV 398
Query: 375 PSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSR 434
P+K +++K I + ++ A +++ L KKS A E+ RL ++ ++
Sbjct: 399 PTKPKLMQKCAEINALVNRPWTEAELQEKL--KKSGVLTEKWNATERVRLNNAIKEQKAL 456
Query: 435 HDEVDMERIKKRLQELEASR----------DSKVKDAKAIRLAEMNRKNRVENF 478
+ E+ + L+ LE S+ K+ ++ RLAE+NR NR +N
Sbjct: 457 GNTEMEEKYRSELEALENSKLAYGTTLKSTPKKMVHSQQDRLAELNRLNRRKNI 510
>gi|289526403|gb|ADD01324.1| FI13029p [Drosophila melanogaster]
Length = 467
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 96/185 (51%), Gaps = 10/185 (5%)
Query: 267 TIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRSYKLENR 326
++R+ + +P F E ++G FVR+ +G+ +Y + + + + Y+++ +
Sbjct: 135 VLKRNDIKNLLGKPIFAEAVIGSFVRINVGK-----VYSI--YETIALHQDSKDYRVDGK 187
Query: 327 TTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKES 386
T L + G+E +R + +VS+ P ++EF WL RN +P+ D+ +K+
Sbjct: 188 RTNLTLVLRCGSEKRYSR--IDVVSNQPITQKEFLLWLETNLRNRCTLPTLNDIAKKQVQ 245
Query: 387 IQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKR 446
++ + Y+ V++++Q+KK A + N A K L E ++A +D ++ ++K+
Sbjct: 246 VKNACKYSYTETDVEKLIQDKKEAGIKQ-NAAYRKISLIIERDMAAGMNDVEKVQVLEKK 304
Query: 447 LQELE 451
+ E++
Sbjct: 305 ILEID 309
>gi|189181857|gb|ACD81705.1| IP12502p [Drosophila melanogaster]
Length = 467
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 96/185 (51%), Gaps = 10/185 (5%)
Query: 267 TIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRSYKLENR 326
++R+ + +P F E ++G FVR+ +G+ +Y + + + + Y+++ +
Sbjct: 135 VLKRNDIKNLLGKPIFAEAVIGSFVRINVGK-----VYSI--YETIALHQDSKDYRVDGK 187
Query: 327 TTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKES 386
T L + G+E +R + +VS+ P ++EF WL RN +P+ D+ +K+
Sbjct: 188 RTNLTLVLRCGSEKRYSR--IDVVSNQPITQKEFLLWLETNLRNRCTLPTLNDIAKKQVQ 245
Query: 387 IQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKR 446
++ + Y+ V++++Q+KK A + N A K L E ++A +D ++ ++K+
Sbjct: 246 VKNACKYSYTETDVEKLIQDKKEAGIKQ-NAAYRKISLIIERDMAAGMNDVEKVQVLEKK 304
Query: 447 LQELE 451
+ E++
Sbjct: 305 ILEID 309
>gi|24585751|ref|NP_724373.1| CG31702 [Drosophila melanogaster]
gi|22947059|gb|AAN11142.1| CG31702 [Drosophila melanogaster]
gi|274513953|gb|ACZ98477.1| FI11009p [Drosophila melanogaster]
Length = 441
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 96/185 (51%), Gaps = 10/185 (5%)
Query: 267 TIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRSYKLENR 326
++R+ + +P F E ++G FVR+ +G+ +Y + + + + Y+++ +
Sbjct: 109 VLKRNDIKNLLGKPIFAEAVIGSFVRINVGK-----VYSI--YETIALHQDSKDYRVDGK 161
Query: 327 TTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKES 386
T L + G+E +R + +VS+ P ++EF WL RN +P+ D+ +K+
Sbjct: 162 RTNLTLVLRCGSEKRYSR--IDVVSNQPITQKEFLLWLETNLRNRCTLPTLNDIAKKQVQ 219
Query: 387 IQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKR 446
++ + Y+ V++++Q+KK A + N A K L E ++A +D ++ ++K+
Sbjct: 220 VKNACKYSYTETDVEKLIQDKKEAGIKQ-NAAYRKISLIIERDMAAGMNDVEKVQVLEKK 278
Query: 447 LQELE 451
+ E++
Sbjct: 279 ILEID 283
>gi|302419415|ref|XP_003007538.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
gi|261353189|gb|EEY15617.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
Length = 588
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 126/288 (43%), Gaps = 44/288 (15%)
Query: 271 SKLAKWFMEPFFEELIVGCFVRVGIGRS-KNGP-IYRLCMVRNVDATEPDRSYKLE---- 324
++ A++ P FE I GC+VRV +G K G YRL ++ + +P Y L
Sbjct: 251 ARFAQYCFNPGFENAITGCYVRVSLGPDPKTGQDDYRLAKIKGIAVGKP---YALNGPSG 307
Query: 325 NRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKK 384
+ T +Y+ G + + SD P E EF +++ ++ + P Q +L K
Sbjct: 308 SFVTDQYVIAAHGK--AEKEFAFIFCSDKPVTEREFNRYVTTLQVDGMAFPKTQVLLNK- 364
Query: 385 ESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAE---KDRLRRELEVA---------- 431
I IN FV + T ++ ++K A L + +DRLR E+E A
Sbjct: 365 --IDDINKFVERSLTSAEI--DEKVARKNELRKKFDPERRDRLRWEIEEATAAGHTRRIA 420
Query: 432 --QSRHDEVDMERIKKRLQELEASRDSKVKDAKAIRLAEMNRKNRVEN--------FKNA 481
Q D++ R+ R L+A + + A+ RLA++NR+ R +N K
Sbjct: 421 ELQEELDDLLSNRLAFRTT-LDAPKTTSTNAAQQDRLADINRERRRQNAANVGKAQLKEK 479
Query: 482 SELKRVNTSLKAGEAGYDPFSRRWTRSRNYYI---SKPGEEVTAEANG 526
E ++ +++ GE SRR R++ ++ + E+ A NG
Sbjct: 480 HEARKKEAAIERGEVTDIDLSRR-IRTKTKFVHQNHQKAEDSAASGNG 526
>gi|116201563|ref|XP_001226593.1| hypothetical protein CHGG_08666 [Chaetomium globosum CBS 148.51]
gi|88177184|gb|EAQ84652.1| hypothetical protein CHGG_08666 [Chaetomium globosum CBS 148.51]
Length = 590
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 100/199 (50%), Gaps = 12/199 (6%)
Query: 262 DIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGR--SKNGPIYRLCMVRNVDATEPDR 319
D++ I + RS+ A+ P E+ + GCFVR+ IG + +YR+ ++++ P
Sbjct: 269 DVERIRVGRSRFAEVCFYPGVEKALSGCFVRINIGPDPTTRQDVYRMAVIKSFTQGRP-- 326
Query: 320 SYKLENRTTCKY---LNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPS 376
Y + +RT + L + + + W SD E E+ ++ + +P+
Sbjct: 327 -YAITDRTGHQIVVDLYIKAAHGKAQREWPFITCSDRDFTEGEWNRYKQVCLSEGVPIPT 385
Query: 377 KQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVA-AEKDRLRRELEVAQSRH 435
K +++ K I IN + + T ++ ++ K ++ + + E+D+L R+L++A++R
Sbjct: 386 KPELVAK---IGDINNLIGRSWTDLEVSEKLKRQNALHIKYSGVERDQLARQLDIARARG 442
Query: 436 DEVDMERIKKRLQELEASR 454
DE + R++++L LE R
Sbjct: 443 DEAAVSRLQEKLDNLEVPR 461
>gi|24585757|ref|NP_724376.1| CG31703 [Drosophila melanogaster]
gi|22947061|gb|AAN11144.1| CG31703 [Drosophila melanogaster]
Length = 439
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 96/185 (51%), Gaps = 10/185 (5%)
Query: 267 TIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRSYKLENR 326
++R+ + +P F E ++G FVR+ +G+ +Y + + + + Y+++ +
Sbjct: 109 VLKRNDIKNLLGKPIFAEAVIGSFVRLNVGK-----VYSI--YETIALHQDSKDYRVDGK 161
Query: 327 TTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKES 386
T L + G+E +R + +VS+ P ++EF WL RN +P+ D+ +K+
Sbjct: 162 RTNLILVLRCGSEKRYSR--IDVVSNQPITQKEFLLWLETNLRNRCTLPTLNDIAKKQVQ 219
Query: 387 IQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKR 446
++ + Y+ V++++Q+KK A + N A K L E ++A +D ++ ++K+
Sbjct: 220 VKNACKYSYTETDVEKLIQDKKEAGIKQ-NAAYRKISLIIERDMAAGMNDVEKVQVLEKK 278
Query: 447 LQELE 451
+ E++
Sbjct: 279 ILEID 283
>gi|315047446|ref|XP_003173098.1| hypothetical protein MGYG_05685 [Arthroderma gypseum CBS 118893]
gi|311343484|gb|EFR02687.1| hypothetical protein MGYG_05685 [Arthroderma gypseum CBS 118893]
Length = 638
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 90/377 (23%), Positives = 156/377 (41%), Gaps = 61/377 (16%)
Query: 258 PTYD------DIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGR--SKNGPIYRLCMV 309
P YD D++ I RS A+ P F++ I C+ RV +G + P YR+ ++
Sbjct: 275 PPYDPPAELRDLQRARIARSGFAQVCFYPGFDQAISNCYTRVTLGPNPTTGAPEYRIGLI 334
Query: 310 RNVDATEPDRSYKLE-----NRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWL 364
+ TE R+Y +E N T +Y + G A + M S+SP E EF ++
Sbjct: 335 KKF--TE-GRAYAIEGPNGRNFVTTQYCVLAHGKAERA--FPFIMCSESPFTEAEFNRYR 389
Query: 365 REVERNSGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRL 424
+ + +MP+K V K I ++ ++ +++ L+ + + ++ + +L
Sbjct: 390 KTMAVEGFKMPTKSAVDRKVADINRLLAHDFTKEELEEKLRRQGTNDNK--QAVYNRIQL 447
Query: 425 RRELEVAQSRHDEVDMERIKKRLQELEASR----DSKVK-----DAKAIRLAEMNRKNRV 475
R A + DE + L L + + VK ++ RLA++N +N+
Sbjct: 448 ERRRNEAIASKDEAAIAECDAELARLTGPKLAFGTTLVKPRPSEKSQQERLADLNMRNQK 507
Query: 476 ENFKNASELK--------RVNTSLKAGEAGYDPFSRRWTRSRNYYISKPGE--------- 518
N +N + + ++ GEA D F+R TR+R YY S G
Sbjct: 508 LNTENVRKAQLAERKAAKIAAAAVARGEAVADRFARVKTRARTYYESTDGHLVPLKPEAA 567
Query: 519 ------EVTAEANGDKNGVPGGANGEEGATGEVGMAATEAALEAAAGAGKLVDTNAPLDL 572
+T +N + + ANG ++G AT + G V + P D
Sbjct: 568 IADRSRAITPASNNNTDATNTPANGTSPSSGTPAKPATPKVYK-----GVPVIRHRPTD- 621
Query: 573 GTESNMLH-DFELDISL 588
E N+ DF+LDI +
Sbjct: 622 --EDNIAALDFDLDIDI 636
>gi|347840505|emb|CCD55077.1| similar to RNA polymerase II transcription elongation factor Rtf1p
[Botryotinia fuckeliana]
Length = 610
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 110/235 (46%), Gaps = 25/235 (10%)
Query: 262 DIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSK--NGPIYRLCMVRNVDATEPDR 319
D++ + + RS+ A P F++ I GCFVRV IG K N +YR+ +V+ + DR
Sbjct: 266 DLERVRVGRSRFAMVCFYPGFDDSITGCFVRVNIGVDKETNQNLYRMGLVKGF---KEDR 322
Query: 320 SYKL-----ENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRM 374
Y + + +T +Y+ G S W SDS E E++++ + + +
Sbjct: 323 PYAMMSANGKQFSTTQYVIAAHGK--SERSWPFIACSDSRFTEAEWQRYKQNCIADGIPV 380
Query: 375 PSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSR 434
P+K +++K I + ++ ++ L+ K S + N +E+ RL ++ +S
Sbjct: 381 PTKPKLMQKCAEINALVNRPWTEEELQTKLK-KSSVLTEKWNT-SERARLNNAIKEQKSL 438
Query: 435 HDEVDMERIKKRLQELEASR-----------DSKVKDAKAIRLAEMNRKNRVENF 478
+ E+ + L+ LE+++ K ++ RLAE+NR NR +N
Sbjct: 439 GNTELEEKYRSELEALESAKLAYGTTLKPTQKKKTVHSQQDRLAELNRTNRRKNI 493
>gi|358395799|gb|EHK45186.1| hypothetical protein TRIATDRAFT_163887, partial [Trichoderma
atroviride IMI 206040]
Length = 603
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 131/311 (42%), Gaps = 43/311 (13%)
Query: 258 PTYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPI--YRLCMVRNVDAT 315
P D + + + R++ A+ P FE I GC++R+ +G + YRL +++ +
Sbjct: 254 PELRDFERVRLGRNEFAQVCSTPGFEAAITGCYIRIALGAHPETGVEQYRLALIKGFTTS 313
Query: 316 EPDRSYKLE----NRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNS 371
P Y L + T +Y+ G + + S E E ++ +
Sbjct: 314 RP---YALNGPQGSFVTDQYVKAAHGK--AIKEFPFIAASGGSITESELNRYKVTCHNDG 368
Query: 372 GRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVA 431
+P+K +++K + I + ++ +K + ++ R +E+ R+ LE A
Sbjct: 369 VTLPTKAFLMDKIDDINGLINHKWTNEEIKARVAKRNEFRKR--FDPSERQRVANLLEEA 426
Query: 432 QSRHDEVDMERIKKRLQEL-----------------EASRDSKVKDAKAIRLAEMNRKNR 474
D+ +E +++ L +L EA++ S +D RLAE NR+NR
Sbjct: 427 IQEGDDQKVEELQEELDKLGRERLAFKTSLGASKNPEATKASSEQD----RLAERNRENR 482
Query: 475 VEN--------FKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANG 526
N K ++ + + +LK GE + +SRR R++ ++ E+V +
Sbjct: 483 RLNQEAVRKAQLKEKAKAREIEMALKRGEVIQEDYSRRL-RTKAKFVHDINEKVGEKPEA 541
Query: 527 DKNGVPGGANG 537
K+G G NG
Sbjct: 542 PKDGAGAGING 552
>gi|365760866|gb|EHN02553.1| Rtf1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 363
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 94/200 (47%), Gaps = 13/200 (6%)
Query: 258 PTYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNG--PIYRLCMVRNVDAT 315
P D ++ I RS +AK+ P FE+++ GC+ RV + K YR+ + V
Sbjct: 142 PEISDYNKLRIGRSFVAKFCFYPGFEDVVKGCYGRVNVATDKRTGKTSYRMVRIERVFLQ 201
Query: 316 EPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMP 375
+P Y + T +Y VT G + +QM SD ++E++++ + ++ + P
Sbjct: 202 KP---YSMGKFYTNQYFGVTQGKDRKV--FQMNYFSDGSFADDEYRRYFKALDNSHMVKP 256
Query: 376 SKQDVLEK-KESIQKINTFVYSAAT---VKQMLQEKKSASSRPLNVAAEKDRLRRELEVA 431
S + K KE + +NT + T V+ +Q K S N EK LR +L+ A
Sbjct: 257 SLHSLSNKTKEVMDFVNTPLTDKTTDEVVRHRMQFNKKLSG--TNAVLEKTVLREKLQYA 314
Query: 432 QSRHDEVDMERIKKRLQELE 451
+ ++E D+ + +L+ E
Sbjct: 315 KETNNEKDIAKYSAQLRNFE 334
>gi|331216958|ref|XP_003321158.1| hypothetical protein PGTG_02200 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309300148|gb|EFP76739.1| hypothetical protein PGTG_02200 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 548
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 127/260 (48%), Gaps = 22/260 (8%)
Query: 259 TYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGP----IYRLCMVRNVDA 314
T +DI+ + + RS+ A+ FFEE G +VRV +G SK+ P YR+ + N+
Sbjct: 228 TLNDIRSVMLTRSRAAELCSTKFFEEYAKGMWVRVSVGFSKDDPKREVKYRVGEITNI-- 285
Query: 315 TEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRM 374
+ + Y++E + T L V + + +VS+S E E+ + E ++++ R+
Sbjct: 286 VQHRKYYEVEGQATKVALVVVLAKDEKTVL--LDVVSNSSIQENEWLFVVGECQKHAVRL 343
Query: 375 PSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPL--NVAAEKDRLRRELEVAQ 432
PSK+++ K + I+K +V + + ++ KK ++ L +RLR E E Q
Sbjct: 344 PSKKEISRKIKMIEKYQDWVKDESDITAQVKAKKEMRAQGLGPTTLTISERLRLESERDQ 403
Query: 433 SRHDEVDMERIKKRLQELEASRDSKVK-DAKAIRLAEMNRKNRVENFKN----ASELKRV 487
+ ++E + ++LE + + K D+ L E NRK E + ASEL+R
Sbjct: 404 AAALG-NLELAAQLTRQLEQASGAVFKTDSLMSELNERNRKANREEIRRAEVAASELRR- 461
Query: 488 NTSLKAGEAG----YDPFSR 503
+KA EAG DP +R
Sbjct: 462 -QQMKALEAGAAVKLDPSAR 480
>gi|296804698|ref|XP_002843199.1| vegetative cell wall protein gp1 [Arthroderma otae CBS 113480]
gi|238845801|gb|EEQ35463.1| vegetative cell wall protein gp1 [Arthroderma otae CBS 113480]
Length = 635
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 138/338 (40%), Gaps = 48/338 (14%)
Query: 224 QSESESRSHSDDEGSTGDGGMADSDDDGAPGSGR-----------PTYD------DIKEI 266
Q ++ S ++ +TG ++DD A G P YD D +
Sbjct: 229 QRRRDASSRKNNNNNTGSSPARETDDRDASGESEVEWDEGTRRSPPQYDPPAELADFQRA 288
Query: 267 TIRRSKLAKWFMEPFFEELIVGCFVRVGIGR--SKNGPIYRLCMVRNVDATEPDRSYKLE 324
+ RS A+ P F+ I C+ RV +G S P YR+ +++ P Y +E
Sbjct: 289 RVGRSNFAQVCFYPGFDRAINNCYARVSLGPNPSTGKPEYRIGLIKRFTEGRP---YAIE 345
Query: 325 -----NRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQD 379
N T +Y + G + + SDSP E EF ++ + + +MP+K
Sbjct: 346 GPNGRNFITTQYCRLAHGK--AEKDFPFIACSDSPFTEGEFNRYRQTMIVEDCKMPTKSM 403
Query: 380 VLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVD 439
V K I ++ ++ +++ L+ + + ++ L + + +L R A + DE
Sbjct: 404 VSNKVADINRLLNHQFTKEELEEKLRRQGTNDNKQLIFS--RIQLERRRNEAIANKDEAA 461
Query: 440 MERIKKRLQELEA---------SRDSKVKDAKAIRLAEMNRKNR---VENFKNASELKRV 487
+ L L ++ + ++ RLAE+N +N+ EN + A +R
Sbjct: 462 IAECDAELARLTGPKLAFGTSLTKPRSSEKSQQERLAELNLRNQKLNTENVRKAQLAERK 521
Query: 488 NTSLKA-----GEAGYDPFSRRWTRSRNYYISKPGEEV 520
+ A GEA D F+R TR+R YY S G V
Sbjct: 522 AAKMAAVAVARGEAVADRFARVKTRARTYYESTDGHLV 559
>gi|194877822|ref|XP_001973951.1| GG21358 [Drosophila erecta]
gi|190657138|gb|EDV54351.1| GG21358 [Drosophila erecta]
Length = 427
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 98/185 (52%), Gaps = 11/185 (5%)
Query: 267 TIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRSYKLENR 326
++R+ + + F E ++G FVR+ +G+ IY C+ +D + Y++ ++
Sbjct: 100 VLKRNDMENLLGKHIFAETVIGAFVRLNVGK-----IY--CIYEIIDLHQDREDYRVGSK 152
Query: 327 TTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKES 386
T L + +G+E +R + +VS+ P ++EF WL + R+ +P+ DV +K+
Sbjct: 153 RTNLVLILRYGSEKRDSR--IDVVSNQPITQKEFLLWLSKNLRDRQILPTLLDVGKKQVQ 210
Query: 387 IQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKR 446
+++ Y+ A V+++ ++K+ + N A K RL E ++A HD ++ ++K+
Sbjct: 211 MKEACENSYTEADVEKLQNKRKAGLMQ--NAAYRKIRLIIERDMAAGIHDAEKVQVLEKK 268
Query: 447 LQELE 451
+Q ++
Sbjct: 269 IQAID 273
>gi|238612397|ref|XP_002398210.1| hypothetical protein MPER_01235 [Moniliophthora perniciosa FA553]
gi|215474259|gb|EEB99140.1| hypothetical protein MPER_01235 [Moniliophthora perniciosa FA553]
Length = 178
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 73/134 (54%), Gaps = 4/134 (2%)
Query: 259 TYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNG-PIYRLCMVRNVDATEP 317
T D + + + R KL+K M P+F+ + G ++R IG ++G P+YR+C + ++ EP
Sbjct: 42 TMADFESVRLDRLKLSKHCMSPWFDRYVEGAYIRYLIGNDEDGTPVYRICRIERLNE-EP 100
Query: 318 DRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSK 377
+ YK+E + + + +GN A + + VS+ P +EF++ + E + +MP+K
Sbjct: 101 VKPYKIEGVLFDRTVELAYGNSKKA--FPLDKVSNGPFHPKEFERMSKTYEHDKIKMPTK 158
Query: 378 QDVLEKKESIQKIN 391
+ K+ ++ +
Sbjct: 159 SALETKRARMEHLT 172
>gi|195475844|ref|XP_002090193.1| GE12937 [Drosophila yakuba]
gi|194176294|gb|EDW89905.1| GE12937 [Drosophila yakuba]
Length = 435
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 93/185 (50%), Gaps = 10/185 (5%)
Query: 267 TIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRSYKLENR 326
I+R+ + + F E + G FVR+ +G+ IY C+ +D + + Y++ ++
Sbjct: 107 VIKRNDMENLLNKSIFSETVTGSFVRLCVGK-----IY--CIYEIIDLNQDRKDYQVGSK 159
Query: 327 TTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKES 386
T L + G+E +R + +VS+ P ++EF WL R+ +P D+ +K+
Sbjct: 160 HTNLLLTLRCGSEKRFSR--IDVVSNQPITQKEFLLWLATNLRDRHILPKLSDIAKKQMQ 217
Query: 387 IQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKR 446
I++ + + A V++ +Q K+ A + N K L E E+A + D ++ ++K
Sbjct: 218 IKEACKYNFPEADVEKHIQTKRKAGLKQ-NAVYRKICLILEREMAAGKDDVGKVQALEKE 276
Query: 447 LQELE 451
+QE++
Sbjct: 277 IQEID 281
>gi|302683478|ref|XP_003031420.1| hypothetical protein SCHCODRAFT_16179 [Schizophyllum commune H4-8]
gi|300105112|gb|EFI96517.1| hypothetical protein SCHCODRAFT_16179 [Schizophyllum commune H4-8]
Length = 540
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 94/201 (46%), Gaps = 14/201 (6%)
Query: 259 TYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPD 318
T D+ +I + R + K P+F++ G ++R IG P+YR+C V VD E
Sbjct: 220 TLADMWKIWLTRDMIVKHCYAPWFQDYAKGAWMRYLIGNENGMPVYRVCEV--VDFEETK 277
Query: 319 RSYKLENRTTCKYL--NVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPS 376
+ Y ++ KY+ +V + +A W M VS+S P + EF + ++ P+
Sbjct: 278 KPYAIDG---SKYIDFDVVLRHGDAARTWAMDKVSNSKPSDREFARAKIVWQKARLPFPT 334
Query: 377 KQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRP-------LNVAAEKDRLRRELE 429
+ K E +++ + + + M + + R + + +E+ RL + L
Sbjct: 335 HDTIARKSEEMRRFVSKPVTEEEITYMTKRGRELKQRVFGNQLTGIELVSERARLEQALS 394
Query: 430 VAQSRHDEVDMERIKKRLQEL 450
+A++R D +++ ++K+L L
Sbjct: 395 LAEARRDFDEVDALQKQLAAL 415
>gi|323448143|gb|EGB04046.1| hypothetical protein AURANDRAFT_72613 [Aureococcus anophagefferens]
Length = 260
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 62/124 (50%), Gaps = 14/124 (11%)
Query: 244 MADSDDDGAPGSGRPTYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPI 303
+ SD+D SG I ++ + RS L KW EPFFE+ ++GC+VR+GIG++ GP
Sbjct: 131 VVSSDEDPPLSSG-----AIGKLRLPRSLLEKWVEEPFFEKAVIGCYVRLGIGKAP-GPH 184
Query: 304 ----YRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEE 359
Y++C + V+ E SY T K L + G W+M ++S+ E
Sbjct: 185 GEAQYKVCEIIGVE--EYKHSYPFGEFETKKALMLRIGRNQRL--WRMNVISNHRFAAAE 240
Query: 360 FKQW 363
+W
Sbjct: 241 IDEW 244
>gi|430813217|emb|CCJ29416.1| unnamed protein product [Pneumocystis jirovecii]
Length = 333
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 93/399 (23%), Positives = 167/399 (41%), Gaps = 83/399 (20%)
Query: 1 MADLENLLLEAAGRT---NSAGRN----RHSASSSKRRREGSYSGS-----DSRDDDSDD 48
M DL + LL AG N++ +N + S KR + G Y+ + S DD S++
Sbjct: 1 MDDLSDELLALAGHKDIENTSQKNELPRKKKIMSHKRLQSGKYTENYRESLGSNDDSSEE 60
Query: 49 NRGYGSRKPSGSQVPLKKRLDPAERDDDQGSQEEGDYDGGASEHEGDSSNESDDDNHGQM 108
Y S + S+ + RD+D E+ EG +E D M
Sbjct: 61 --LYSSECSTESE-------NIVSRDEDDNDIEKYSIPYVL---EGKFKDEEDRKRIMSM 108
Query: 109 TELEREMMIFERDDKKVDKNLRDKFRSRREERSTRSTKETPPLPSSRSARLAARSADRAA 168
E+ERE +++ER+++ + + R +++ K+ L + RS + S A
Sbjct: 109 NEVERESILYEREEETQKLQEKKELAERLKQKKLDIKKQ---LKTRRSTQGTKNSE--AI 163
Query: 169 AKDDALNELRAKR---LKQQDPEAHRRLRDASRGGSGSRVLSPVKRKAFTPAGLSSSSQS 225
+K D L EL+ KR + DPE S++ ++ F + ++
Sbjct: 164 SKKDKLTELKRKREEKYNRTDPE------------QDSKIFRKRNKQKF-------NKKN 204
Query: 226 ESESRSHSDDEGSTGDGGMADSDDDGAPGSGRPTYDDIKEITIRRSKLAKWFMEPFFEEL 285
E +S + D + +T + D +D GR + AK+ P FEE
Sbjct: 205 EHDSENKEDKDETT----ILDLNDVNNTRLGRKHF-------------AKFLFHPLFEET 247
Query: 286 IVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARW 345
I+GCF R+ IG + G T P + Y E + + + G ++ +
Sbjct: 248 IIGCFARIKIGENSQGL-----------QTSP-KVYSFEGILSNQKIECIHG--ANIKAF 293
Query: 346 QMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKK 384
++ VS+S ++EF +W ++++++ P K+ ++EKK
Sbjct: 294 EITFVSNSAITQKEFDRWTQQLKQDKIAAP-KKSLIEKK 331
>gi|238493023|ref|XP_002377748.1| RNA polymerase II transcription elongation factor Rtf1p, putative
[Aspergillus flavus NRRL3357]
gi|220696242|gb|EED52584.1| RNA polymerase II transcription elongation factor Rtf1p, putative
[Aspergillus flavus NRRL3357]
Length = 628
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 81/369 (21%), Positives = 153/369 (41%), Gaps = 64/369 (17%)
Query: 225 SESESRSHSDDEGSTGDGGMADSDDDGAPGSGRPTYDDIKEITIRRSKLAKWFMEPFFEE 284
S+ ++ SD E GD + DD P R DI+ + R+ A+ P F++
Sbjct: 239 SDEDAEGESDAEWDDGDRSPSLPKDD-PPAELR----DIQRARVGRTNFAQVCFYPGFDD 293
Query: 285 LIVGCFVRVGIG--RSKNGPIYRLCMVRNVDATEPDRSYKLE-----NRTTCKYLNVTWG 337
I GC+ RV IG R YRLC+++ P Y +E + T +Y + G
Sbjct: 294 AISGCYARVNIGPNRETGQNEYRLCLIKKFTEGRP---YSMEGPNGRSFVTKQYAVLAHG 350
Query: 338 NESSAARWQMAMVSDSP------------PLEE----EFKQWLREVERNSGRMPSKQDVL 381
+ + SDS PL EF ++ + + +M +K V
Sbjct: 351 K--AEREFPFVACSDSAITEVCFIFLPANPLSNTVAAEFNRYRQTMAVEDCKMATKSTVA 408
Query: 382 EKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDME 441
EK I ++ ++ + + L+++ S ++ + ++ ++L++A++ D+ ++E
Sbjct: 409 EKVVDINRLLNHKFTPEELTEKLRKQGSLDTK--STVFKRMETEKKLKLAKAAGDDAEVE 466
Query: 442 RIKKRLQELE---------ASRDSKVKDAKAIRLAEMNRKNRVENFKNA--SELKR---- 486
R++ L + +S+ K ++ RL E+N +N+ N +N ++L+
Sbjct: 467 RLESELASMSTPKLAFNATSSKPRADKPSEHERLLELNLRNQRLNTENVRRAQLEERKAS 526
Query: 487 --VNTSLKAGEAGYDPFSRRWTRSRNYY------------ISKPGEEVTAEANGDKNGVP 532
++ GEA +PF R T +R +Y ++ G T K P
Sbjct: 527 RKAAAAVARGEAQPNPFMRVRTHARTHYDANGNGTTLSETTTRDGTPATGSDTPSKANTP 586
Query: 533 GGANGEEGA 541
G+N G+
Sbjct: 587 NGSNTPSGS 595
>gi|403331412|gb|EJY64651.1| hypothetical protein OXYTRI_15313 [Oxytricha trifallax]
Length = 626
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 59/106 (55%), Gaps = 10/106 (9%)
Query: 261 DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGI-GRSKNGPIYRLCMVRNVDATEPDR 319
D +K+I ++R+KL +W +F+E++VGCFVR GR YRL + V P
Sbjct: 232 DQLKKIILKRAKLEQWVEYTYFKEIVVGCFVRFSFSGR------YRLAEIVEVKEN-PGN 284
Query: 320 SYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLR 365
Y+L T L + + N + +++ +VS++ P E+EF++ L+
Sbjct: 285 EYELGKFKTSLQLGLRFSN--TVRFFKLILVSNADPNEDEFREMLK 328
>gi|255944551|ref|XP_002563043.1| Pc20g05030 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211587778|emb|CAP85832.1| Pc20g05030 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 609
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 126/277 (45%), Gaps = 34/277 (12%)
Query: 262 DIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIG-RSKNGPI-YRLCMVRNVDATEPDR 319
+I+ I R+ AK P FE ++GC+ R+ IG + G YRL ++ + +P
Sbjct: 269 EIRRAQIGRNNFAKVCFYPGFENAMIGCYARLSIGPHPETGQNEYRLGLITGISQGKP-- 326
Query: 320 SYKLENR-----TTCKYLNVTWGNESSAAR-WQMAMVSDSPPLEEEFKQWLREVERNSGR 373
Y LE T +Y+ + G A R + S+SP E E++++++ + +
Sbjct: 327 -YALEGENGRSFVTDQYVKLAHGK---AVRDFPFVTFSNSPLTEAEYRRYVQTLAVEDCK 382
Query: 374 MPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQS 433
M +K V K I ++ ++ + + L+ ++ A NV + L R LE A+
Sbjct: 383 MATKSKVESKVADINRLLNHTFTREELNEKLR-RQGAFDEKKNV-LNRLELERNLEFAKV 440
Query: 434 RHDEVDMERIKKRLQELEASR----DSKVKD------AKAIRLAEMNRKNR---VENFKN 480
+ + E+I+ LQ+L S VK ++A R+ ++N +N+ +EN +
Sbjct: 441 NGNVEEAEKIEAELQKLATPALSWGTSLVKKEADKGLSEAERVHQINLRNQKLNIENGRR 500
Query: 481 ASELKRVNTSLKA-----GEAGYDPFSRRWTRSRNYY 512
A +R A GEA +PF R T ++ ++
Sbjct: 501 AQLEERKAAKKAAQAVARGEAAPNPFMRVRTVAKTHH 537
>gi|302498409|ref|XP_003011202.1| hypothetical protein ARB_02482 [Arthroderma benhamiae CBS 112371]
gi|291174751|gb|EFE30562.1| hypothetical protein ARB_02482 [Arthroderma benhamiae CBS 112371]
Length = 637
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 89/393 (22%), Positives = 159/393 (40%), Gaps = 44/393 (11%)
Query: 233 SDDEGSTGDGGMADSDDDGAPGSGRPTYDDIKEIT------IRRSKLAKWFMEPFFEELI 286
+DD ++G+ + D P YD E+ I RS A+ P F++ I
Sbjct: 250 ADDRDASGESEVEWDDKPQRRSVSPPRYDPPAELRELQRARIARSNFAQVCFYPGFDQAI 309
Query: 287 VGCFVRVGIGR--SKNGPIYRLCMVRNVDATEPDRSYKLE-----NRTTCKYLNVTWGNE 339
C+ RV +G S P YR+ +++ P Y +E N T +Y + G
Sbjct: 310 SNCYTRVSLGPNPSTGKPEYRIGLIKKFTEGRP---YAIEGPNGRNFVTTQYCLLAHGK- 365
Query: 340 SSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKESIQKINTFVYSAAT 399
+ + S+SP E EF ++ + + + +MP+K V +K I ++ ++
Sbjct: 366 -AEKEFPFIACSESPFTEAEFNRYRKTMAVDGLKMPTKSAVDKKVADINRLLAHDFTKEE 424
Query: 400 VKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKRLQELEASR----D 455
+++ L+ + + ++ L + +L R A + DE + L L +
Sbjct: 425 LEEKLRRQGTNDNKQL--IYNRIQLERRRNEAIANKDEAAIAECDAELARLTGPKLAFGT 482
Query: 456 SKVK-----DAKAIRLAEMNRKNRVENFKNASELK--------RVNTSLKAGEAGYDPFS 502
+ VK + RLAE+N +N+ N +N + + ++ GEA D F+
Sbjct: 483 TLVKPRPNEKTQQERLAELNMRNQKLNTENVRKAQLAERKAAKLAAAAVARGEAVADRFA 542
Query: 503 RRWTRSRNYYISKPGEEV-----TAEANGDKNGVPGGANGEEGATGEVGMAATEAALEAA 557
R TR+R YY S G V A A+ + P A+ AT T ++ +
Sbjct: 543 RVKTRARTYYESTDGHLVPVKPEAAIADRSRAITPTTASNNTDATNTPANGTTPRSVTPS 602
Query: 558 AGAGKLVDTNAPL--DLGTESNMLHDFELDISL 588
A V P+ T+ + + +LDI +
Sbjct: 603 KPATPKVYKGVPVIRHRPTDEDNIAALDLDIDI 635
>gi|402085773|gb|EJT80671.1| hypothetical protein GGTG_00665 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 596
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 105/237 (44%), Gaps = 24/237 (10%)
Query: 260 YDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIG--RSKNGPIYRLCMVRNVDATEP 317
D I+ + + R++ + P FE+ +VGCFVR+ IG R +YR+ +++ + A
Sbjct: 266 LDHIQRVRLSRNRFGQVCFHPGFEKAMVGCFVRISIGPDRETGENVYRMAVIKGI-AKGK 324
Query: 318 DRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSK 377
+ + + T VT + + W S+SP + E++++ +P++
Sbjct: 325 EYATDGAHGTIITDQYVTAAHGKAVRDWPFIACSNSPFTDSEWRRYKSTCASEGEPLPTE 384
Query: 378 QDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRH-- 435
+ K + I + ++ V Q ++ + +R DR+ E E+A+SR
Sbjct: 385 SKIDAKVKDINGLLAHAWTNEEVSQKIERIRKLKARFQGY----DRMELEQEIAESRAVG 440
Query: 436 DEVDMERIKKRLQELE----ASRDSKVKDAKAI-----------RLAEMNRKNRVEN 477
+E + ++++L LE A R S + K RLA++N +NR N
Sbjct: 441 NEDRAKELQEQLDNLETPRLAFRTSLTQHKKPASSSNSSMSQQERLAQLNIENRKRN 497
>gi|425765536|gb|EKV04213.1| hypothetical protein PDIG_90770 [Penicillium digitatum PHI26]
gi|425783492|gb|EKV21340.1| hypothetical protein PDIP_07690 [Penicillium digitatum Pd1]
Length = 611
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 125/277 (45%), Gaps = 34/277 (12%)
Query: 262 DIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPI--YRLCMVRNVDATEPDR 319
+I+ + R+ AK P FE ++GC+ R+ IG + YRL ++ + +P
Sbjct: 269 EIRRAQVGRNNFAKVCFYPGFENAMIGCYARLSIGPHPDSGQNEYRLGLITGISQGKP-- 326
Query: 320 SYKLENR-----TTCKYLNVTWGNESSAAR-WQMAMVSDSPPLEEEFKQWLREVERNSGR 373
Y LE T +Y+ + G A R + S+SP E E++++++ + +
Sbjct: 327 -YALEGENGRSFVTDQYVKLAHG---KAVRDFPFVTFSNSPLTEAEYRRYVQTLTVEDCK 382
Query: 374 MPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQS 433
+ +K V K I ++ ++ + + L+ ++ A + NV + L R LE A+
Sbjct: 383 LATKGKVESKVADINRLLNHTFTREELNEKLR-RQGAFDQKKNV-LNRLELERNLEYAKV 440
Query: 434 RHDEVDMERIKKRLQELEASR----DSKVKD------AKAIRLAEMNRKNRVENFKNA-- 481
+ + E+I+ LQ++ S VK ++A R+ ++N +N+ N +N
Sbjct: 441 NGNMEEAEKIEAELQKIVNPTLSWGTSLVKKEIDRGPSEAERVHQINIRNQKLNIENVRR 500
Query: 482 ------SELKRVNTSLKAGEAGYDPFSRRWTRSRNYY 512
K+ ++ GEA +PF R T ++ ++
Sbjct: 501 AQLEERKAAKKAAEAVARGEAAPNPFMRVRTVAKTHH 537
>gi|326470400|gb|EGD94409.1| hypothetical protein TESG_01927 [Trichophyton tonsurans CBS 112818]
Length = 638
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 126/299 (42%), Gaps = 37/299 (12%)
Query: 258 PTYDDIKEIT------IRRSKLAKWFMEPFFEELIVGCFVRVGIGR--SKNGPIYRLCMV 309
P YD E+ I RS A+ P F++ I C+ RV +G S P YR+ ++
Sbjct: 275 PRYDPPAELRELQRARIARSNFAQVCFYPGFDQAISNCYTRVSLGPNPSTGKPEYRIGLI 334
Query: 310 RNVDATEPDRSYKLE-----NRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWL 364
+ P Y +E N T +Y + G + + S+SP E EF ++
Sbjct: 335 KKFTEGRP---YAIEGPNGRNFVTTQYCLLAHGK--AEKEFPFIACSESPFTEAEFNRYR 389
Query: 365 REVERNSGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRL 424
+ + + +MP+K V +K I ++ ++ +++ L+ + + ++ L + +L
Sbjct: 390 KTMAVDGLKMPTKSAVDKKVADINRLLAHDFTKEELEEKLRRQGTNDNKQL--IYNRIQL 447
Query: 425 RRELEVAQSRHDEVDMERIKKRLQELEASR----DSKVK-----DAKAIRLAEMNRKNRV 475
R A + DE + L L + + VK + RLAE+N +N+
Sbjct: 448 ERRRNEAIANKDEAAIAECDAELARLTGPKLAFGTTLVKPRPNEKTQQERLAELNMRNQK 507
Query: 476 ENFKNASELK--------RVNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANG 526
N +N + + ++ GEA D F+R TR+R YY S G V + +
Sbjct: 508 LNTENVRKAQLAERKAAKLAAAAVARGEAVADRFARVKTRARTYYESTDGHLVPVKPDA 566
>gi|327306317|ref|XP_003237850.1| hypothetical protein TERG_02559 [Trichophyton rubrum CBS 118892]
gi|326460848|gb|EGD86301.1| hypothetical protein TERG_02559 [Trichophyton rubrum CBS 118892]
Length = 637
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 83/368 (22%), Positives = 149/368 (40%), Gaps = 44/368 (11%)
Query: 258 PTYDDIKEIT------IRRSKLAKWFMEPFFEELIVGCFVRVGIGR--SKNGPIYRLCMV 309
P YD E+ I RS A+ P F++ I C+ RV +G S P YR+ ++
Sbjct: 275 PRYDPPAELRELQRARIARSNFAQVCFYPGFDQAISNCYTRVSLGPNPSTGKPEYRIGLI 334
Query: 310 RNVDATEPDRSYKLE-----NRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWL 364
+ P Y +E N T +Y + G + + S+SP E EF ++
Sbjct: 335 KRFTEGRP---YAIEGPNGRNFVTTQYCLLAHGK--AEKEFPFIACSESPFTEAEFNRYR 389
Query: 365 REVERNSGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRL 424
+ + + +MP+K V +K I ++ ++ +++ L+ + + ++ L + +L
Sbjct: 390 KTMAVDGLKMPTKSAVDKKVADINRLLAHDFTKEELEEKLRRQGTNDNKQL--VYNRIQL 447
Query: 425 RRELEVAQSRHDEVDMERIKKRLQELEASR----DSKVK-----DAKAIRLAEMNRKNRV 475
R A + DE + L L + + VK + RLAE+N +N+
Sbjct: 448 ERRRNEAIANKDEAVIAECDAELARLTGPKLAFGTTLVKPRPNEKTQQERLAELNMRNQK 507
Query: 476 ENFKNASELK--------RVNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAE---- 523
N +N + + ++ GEA D F+R TR+R YY S G V +
Sbjct: 508 LNTENVRKAQLAERKAAKLAAAAVARGEAVADRFARVKTRARTYYESTDGHLVPVKPEAV 567
Query: 524 -ANGDKNGVPGGANGEEGATGEVGMAATEAALEAAAGAGKLVDTNAPL--DLGTESNMLH 580
A+ + P + AT T ++ + A V P+ T+ + +
Sbjct: 568 IADRSRAITPTTTSNNTDATNTPANGTTPRSVTPSKPATPKVYKGVPVIRHRPTDEDNIA 627
Query: 581 DFELDISL 588
+LDI +
Sbjct: 628 ALDLDIDI 635
>gi|344299732|gb|EGW30085.1| hypothetical protein SPAPADRAFT_63710 [Spathaspora passalidarum
NRRL Y-27907]
Length = 270
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 111/223 (49%), Gaps = 18/223 (8%)
Query: 317 PDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPS 376
P++SY+L N +L V+ N + +++ SDSP ++EF ++L E+++ + +
Sbjct: 11 PEKSYRLNNSNCDLFLTVS-QNRQQTKDFPISVFSDSPISQDEFNRYLDELKKTNESIDY 69
Query: 377 KQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRP----LNVAAEKDRLRRELEVAQ 432
DV +K E +Q+ S + +ML KK + + A K +L EL++A+
Sbjct: 70 LDDVNDKFEQLQQFFNKGMSDKDINEMLARKKKLQDQKGISGYDAVATKAKLMDELKIAK 129
Query: 433 SRHDEVDMERIKKRLQELEASRDSKVK-----DAKAIRLAEMNRKNRVENFKNA--SELK 485
+ + + RL+ +++ + + D+ + ++++N +NR N N +E+K
Sbjct: 130 QQGHTTKVRDLINRLKNIDSILNEQTNSNAGSDSYS-SMSKINERNRKLNQTNIRKAEIK 188
Query: 486 RVNTSLKAGEAGYDPFSRRWTRSRNYY---ISKPGEEVTAEAN 525
N + + G DPFSR T +R +Y I++ E+ EAN
Sbjct: 189 SRNIG-QVTDDG-DPFSRLKTVTRMFYQEIINEENEKALKEAN 229
>gi|358388737|gb|EHK26330.1| hypothetical protein TRIVIDRAFT_114997, partial [Trichoderma virens
Gv29-8]
Length = 602
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 128/316 (40%), Gaps = 43/316 (13%)
Query: 258 PTYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPI--YRLCMVRNVDAT 315
P D + + R++ A+ P FE I GC++R+ +G I YR+ +++
Sbjct: 253 PELRDFDRVRLGRNEFAQVCSTPGFESAITGCYIRIALGAHPETGIEQYRMALIKGFTTG 312
Query: 316 EPDRSYKLE----NRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNS 371
P Y L + T +Y+ T G + + S E E ++ +
Sbjct: 313 RP---YALNGPQGSFVTDQYVKATHGK--AIKEFPFIAASGGQFTENELNRYKVTCHNDG 367
Query: 372 GRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVA 431
+P+K ++EK + I + ++ +K L ++ R E+ RL E A
Sbjct: 368 VTLPTKDYLVEKIDDINGLINHKWTNEEIKARLTKRNELRKR--FDPQERQRLANLAEEA 425
Query: 432 QSRHDE------------VDMERIKKRL-----QELEASRDSKVKDAKAIRLAEMNRKNR 474
R D+ + ER+ + + EA++ S +D RLAE NR+NR
Sbjct: 426 AQRGDDQRAEELQEELEKLGRERLAFKTSLGPSKNPEATKASSEQD----RLAERNRENR 481
Query: 475 VEN--------FKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANG 526
N K ++ + + +LK GE + +SRR R++ ++ E+V +
Sbjct: 482 RLNQEAVRKAQLKEKAKSREIEMALKRGEVISEDYSRRL-RTKAKFVHDINEKVGEKPEA 540
Query: 527 DKNGVPGGANGEEGAT 542
K+ NG +G +
Sbjct: 541 PKDSTSTATNGTKGPS 556
>gi|154270654|ref|XP_001536181.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150409755|gb|EDN05195.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 637
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 103/236 (43%), Gaps = 23/236 (9%)
Query: 262 DIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPI--YRLCMVRNVDATEPDR 319
DI+ + RS A+ P F+ I C+VRV IG +K YRLC ++ +P
Sbjct: 278 DIQRARVGRSNFAQVCFYPGFDSAISNCYVRVVIGVNKESQQNEYRLCSIKKFTEGKP-- 335
Query: 320 SYKLE-----NRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRM 374
Y +E + T +Y + G + + SDSP E EF ++ + + +M
Sbjct: 336 -YAMEAPNGRSFITTQYAVLAHGK--AEKEFPFIACSDSPITEAEFNRYRQTMAVEDCKM 392
Query: 375 PSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSR 434
+K V K I ++ ++ +++ L+ + + ++ + + E+ +L + + A +
Sbjct: 393 ATKSMVANKVADINRLINHQFTKEELEEKLRRQGTNDNK-MKI-FERIQLEKRRQEAIAT 450
Query: 435 HDEVDMERIKKRLQELEASRDS---------KVKDAKAIRLAEMNRKNRVENFKNA 481
DE + + LQ + + + + RL E+NR+N+ N +N
Sbjct: 451 GDEAAIAQCDAELQRFTGPKLAFGTTLVKPRSTEKTQQERLQELNRRNQKLNAENV 506
>gi|378728979|gb|EHY55438.1| hypothetical protein HMPREF1120_03574 [Exophiala dermatitidis
NIH/UT8656]
Length = 608
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 102/231 (44%), Gaps = 12/231 (5%)
Query: 262 DIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPI-YRLCMVRNVDATEPDRS 320
DI+ + R A+ P F+E I C+ RV IG NG YRLC+++ P
Sbjct: 269 DIQRARVGRDNFAQVCYTPGFQEAITDCYARVCIGPGSNGVNDYRLCLIKGFTKGRPYAM 328
Query: 321 YKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDV 380
R + V + S W S S ++E++++ + ++P+K+ +
Sbjct: 329 IGTNGRPFPVDMYVIAAHGKSERPWSFLECSMSKFTDDEWRRYRTVMANEDLKLPTKRFI 388
Query: 381 LEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDM 440
+K E I ++ ++ A + + ++ + + + + EK+ L+ +++ A +E
Sbjct: 389 NQKLEQINRLLAHRFTEAEISEKIKIQNDLLEK-ITRSQEKEDLKSKIKQALEDGNEELA 447
Query: 441 ERIKKRLQELEASR----------DSKVKDAKAIRLAEMNRKNRVENFKNA 481
+ ++ +L + + D+ + RLAE+NR+N+ N +N
Sbjct: 448 QELEHQLANIVPMKLAFGTSLSRSDTGHVNPDQERLAELNRRNQRLNAENV 498
>gi|443897976|dbj|GAC75314.1| paf1/rna polymerase II complex, RTF1 component [Pseudozyma
antarctica T-34]
Length = 534
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 80/167 (47%), Gaps = 8/167 (4%)
Query: 258 PTYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNG-----PIYRLCMVRNV 312
P+ ++ I R ++ + P +++++ G F+R R++ +YR+ V +V
Sbjct: 280 PSLAELNAARISRERIEQRLYAPRWKDVLTGAFIRFAWRRAREDGQGTEEVYRIHQVTDV 339
Query: 313 DATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAM--VSDSPPLEEEFKQWLREVERN 370
+P + Y L + + ++ NV E + ++ + +S SP +E E ++WL +
Sbjct: 340 H-EKPGKFYDLSDDRSGRWCNVYLAFEHAGEEREIRLSNLSRSPFIESERERWLLTLPAY 398
Query: 371 SGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNV 417
++P V K + ++K + A +K++L+ KK ++ +V
Sbjct: 399 KQKIPRASSVAAKADELEKFFDTPLTEADIKKVLEHKKKIRTQAASV 445
>gi|225554910|gb|EEH03204.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 637
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 103/236 (43%), Gaps = 23/236 (9%)
Query: 262 DIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPI--YRLCMVRNVDATEPDR 319
DI+ + RS A+ P F+ I C+VRV IG +K YRLC ++ +P
Sbjct: 278 DIQRARVGRSNFAQVCFYPGFDSAISNCYVRVVIGVNKESQQNEYRLCSIKKFTEGKP-- 335
Query: 320 SYKLE-----NRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRM 374
Y +E + T +Y + G + + SDSP E EF ++ + + +M
Sbjct: 336 -YAMEAPNGRSFITTQYAVLAHGK--AEKEFPFIACSDSPITEAEFNRYRQTMAVEDCKM 392
Query: 375 PSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSR 434
+K V K I ++ ++ +++ L+ + + ++ + + E+ +L + + A +
Sbjct: 393 ATKSMVANKVADINRLINHQFTKEELEEKLRRQGTNDNK-MKI-FERIQLEKRRQEAIAT 450
Query: 435 HDEVDMERIKKRLQELEASRDS---------KVKDAKAIRLAEMNRKNRVENFKNA 481
DE + + LQ + + + + RL E+NR+N+ N +N
Sbjct: 451 GDEAAIAQCDAELQRFTGPKLAFGTTLVKPRSTEKTQQERLQELNRRNQKLNAENV 506
>gi|240274288|gb|EER37805.1| conserved hypothetical protein [Ajellomyces capsulatus H143]
gi|325091636|gb|EGC44946.1| conserved hypothetical protein [Ajellomyces capsulatus H88]
Length = 638
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 104/236 (44%), Gaps = 23/236 (9%)
Query: 262 DIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPI--YRLCMVRNVDATEPDR 319
DI+ + RS A+ P F+ I C+VRV IG +K YRLC ++ +P
Sbjct: 279 DIQRARVGRSNFAQVCFYPGFDSAISNCYVRVVIGVNKESQQNEYRLCSIKKFTEGKP-- 336
Query: 320 SYKLE-----NRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRM 374
Y +E + T +Y + G + + SDSP E EF ++ + + +M
Sbjct: 337 -YAMEAPNGRSFITTQYAVLAHGK--AEKEFPFIACSDSPITEAEFNRYRQTMAVEDCKM 393
Query: 375 PSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSR 434
+K V K I ++ ++ +++ L+ + + ++ + + E+ +L + + A +
Sbjct: 394 ATKSMVANKVADINRLINHQFTKEELEEKLRRQGTNDNK-MKI-FERIQLEKRRQEAIAT 451
Query: 435 HDEVDMERIKKRLQELEASR----DSKVKDAKA-----IRLAEMNRKNRVENFKNA 481
DE + + LQ + + VK A RL E+NR+N+ N +N
Sbjct: 452 GDEAAIAQCDAELQRFTGPKLAFGTTLVKPRSAEKTQQERLQELNRRNQKLNAENV 507
>gi|449296475|gb|EMC92495.1| hypothetical protein BAUCODRAFT_293733 [Baudoinia compniacensis
UAMH 10762]
Length = 619
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 77/169 (45%), Gaps = 14/169 (8%)
Query: 262 DIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIG--RSKNGPIYRLCMVRNVDATEPDR 319
D I R+ AK P FE+ + GC+ RV IG R YR+ ++ +P
Sbjct: 266 DFDRCRIGRTAFAKVCFYPGFEDAVKGCYARVSIGLDRHTGQNTYRMTQIKGFTEGKP-- 323
Query: 320 SYKLE-----NRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRM 374
Y++E + T Y V G ++ W + SDS ++E+ +++ +++++ R
Sbjct: 324 -YQMEAPNGKHFNTDVYAVVAHG--AAEKPWPFSACSDSHFTDQEYDRYIDTLKKDNIRT 380
Query: 375 PSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSR--PLNVAAEK 421
P K+ + + ++I + ++ + Q L +++ + P N A K
Sbjct: 381 PLKKHLSARLDAIHGLLNMDWTDERITQKLANQRAMEKKLDPANAAVIK 429
>gi|327351460|gb|EGE80317.1| vegetative cell wall protein gp1 [Ajellomyces dermatitidis ATCC
18188]
Length = 636
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 104/236 (44%), Gaps = 23/236 (9%)
Query: 262 DIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPI--YRLCMVRNVDATEPDR 319
DI+ + RS A+ P F+ I C+VRV IG +K YRLC ++ +P
Sbjct: 277 DIQRARVGRSNFAQVCFYPGFDSAIANCYVRVVIGVNKETQQNEYRLCSIKRFAEGKP-- 334
Query: 320 SYKLE-----NRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRM 374
Y +E + T +Y + G + + SDSP E EF ++ + + +M
Sbjct: 335 -YAMEGPNGRSFITTQYAVLAHGK--AEREFPFIACSDSPITEAEFNRYRQTMAVEDCKM 391
Query: 375 PSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSR 434
+K V K I ++ ++ +++ L+ + + ++ + V E+ +L + + A +
Sbjct: 392 ATKSMVAGKVADINRLINHQFTKEELEEKLRRQGTNDNK-MKV-FERLQLEKRRQEAIAA 449
Query: 435 HDEVDMERIKKRLQELEASR----DSKVK-----DAKAIRLAEMNRKNRVENFKNA 481
DE + + LQ + S VK + RL E+NR+N+ N +N
Sbjct: 450 GDEAAVAQCDAELQRFTGPKLAFGTSLVKPRSTEKTQQERLQELNRRNQKLNAENV 505
>gi|398412497|ref|XP_003857571.1| Paf1p complex subunit [Zymoseptoria tritici IPO323]
gi|339477456|gb|EGP92547.1| Paf1p complex subunit [Zymoseptoria tritici IPO323]
Length = 601
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 77/169 (45%), Gaps = 14/169 (8%)
Query: 262 DIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIG--RSKNGPIYRLCMVRNVDATEPDR 319
D + + RS AK P FEE I GC+ R+ IG R +YR+ ++ +P
Sbjct: 268 DFERCRVGRSAFAKVCFYPGFEEAIRGCYARISIGLNRETGQNMYRMTQIKGFTEGKP-- 325
Query: 320 SYKLENR-----TTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRM 374
Y+L+N TT +Y V G S+ W SD + E+ +++ + + + R
Sbjct: 326 -YQLDNAIGKKFTTDQYAIVAQG--SAEKPWPFHACSDGRFTQAEYDRFIDTLRKENIRP 382
Query: 375 PSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSR--PLNVAAEK 421
S + + K+ +I + ++ AT++ +K+ + P VA +K
Sbjct: 383 SSLKLLTMKRNAIDDLINTQFTEATLQLKFARQKAMEQKHDPAYVAQQK 431
>gi|261195923|ref|XP_002624365.1| conserved hypothetical protein [Ajellomyces dermatitidis SLH14081]
gi|239587498|gb|EEQ70141.1| conserved hypothetical protein [Ajellomyces dermatitidis SLH14081]
gi|239614451|gb|EEQ91438.1| conserved hypothetical protein [Ajellomyces dermatitidis ER-3]
Length = 636
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 104/236 (44%), Gaps = 23/236 (9%)
Query: 262 DIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPI--YRLCMVRNVDATEPDR 319
DI+ + RS A+ P F+ I C+VRV IG +K YRLC ++ +P
Sbjct: 277 DIQRARVGRSNFAQVCFYPGFDSAIANCYVRVVIGVNKETQQNEYRLCSIKRFAEGKP-- 334
Query: 320 SYKLE-----NRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRM 374
Y +E + T +Y + G + + SDSP + EF ++ + + +M
Sbjct: 335 -YAMEGPNGRSFITTQYAVLAHGK--AEREFPFIACSDSPITDAEFNRYRQTMAVEDCKM 391
Query: 375 PSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSR 434
+K V K I ++ ++ +++ L+ + + ++ + V E+ +L + + A +
Sbjct: 392 ATKSMVAGKVADINRLINHQFTKEELEEKLRRQGTNDNK-MKV-FERLQLEKRRQEAIAA 449
Query: 435 HDEVDMERIKKRLQELEASR----DSKVK-----DAKAIRLAEMNRKNRVENFKNA 481
DE + + LQ + S VK + RL E+NR+N+ N +N
Sbjct: 450 GDEAAVAQCDAELQRFTGPKLAFGTSLVKPRSTEKTQQERLQELNRRNQKLNAENV 505
>gi|322706863|gb|EFY98442.1| RNA polymerase II transcription elongation factor Rtf1p, putative
[Metarhizium anisopliae ARSEF 23]
Length = 590
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 127/307 (41%), Gaps = 55/307 (17%)
Query: 262 DIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPI--YRLCMVRNVDATEPDR 319
D + + + R++ A+ P FE I GC++R+ +G + YR+ +++ + P
Sbjct: 244 DFERVRLGRNEFAQVCFTPGFESAIAGCYIRIALGPHPETGVEQYRMAVIKGFTTSRP-- 301
Query: 320 SYKLENR----TTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMP 375
Y L T +Y+ G + + S E E ++ + ++P
Sbjct: 302 -YALTGPQGPFVTDQYVKAAHGK--AVKEFPFIAASSGKFTENELNRYQVTCTNENVKLP 358
Query: 376 SKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSR--PLNVAAEKDRLRRELEVAQS 433
+K + +K + I + +++ +K L ++ R P AE++R+ + L+ A +
Sbjct: 359 TKAYLADKIDEINNLINHKWTSEEIKARLAKRNELKRRFDP----AERERVGKLLDEAVA 414
Query: 434 RHDEVD------------MERIKKRL-----QELEASRDSKVKDAKAIRLAEMNRKNRVE 476
R +E +R+ R + L+ R + +D RLAE NR+NR
Sbjct: 415 RGNETKAQELQEELEQLGTQRLAFRTTLGSSKNLDGPRAATEQD----RLAERNRENRRM 470
Query: 477 N--------FKNASELKRVNTSLKAGEAGYDPFSRRW-TRSRNYY--------ISKPGEE 519
N K + + + +LK GE D SRR T+++ + +S G E
Sbjct: 471 NAELVRKAQLKEKARAREIEMALKRGEQVADDPSRRLRTKAKFVHDVNDTPQKLSANGSE 530
Query: 520 VTAEANG 526
+ ANG
Sbjct: 531 ASTPANG 537
>gi|340517417|gb|EGR47661.1| predicted protein [Trichoderma reesei QM6a]
Length = 524
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 111/269 (41%), Gaps = 42/269 (15%)
Query: 258 PTYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPI--YRLCMVRNVDAT 315
P D + + + R++ A+ P FE I GC++R+ +G I YR+ +++ +
Sbjct: 201 PELRDFERVRLGRNEFAQVCSTPGFEAAITGCYIRIALGPHPETGIEQYRMALIKGFTTS 260
Query: 316 EPDRSYKLE----NRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNS 371
P Y L + T +Y+ G + + S E E ++ +
Sbjct: 261 RP---YALNGPQGSFVTDQYVKAAHGK--AVKEFPFIAASGGSFTEAELNRYKVTCNNDG 315
Query: 372 GRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVA 431
+P+K+ ++ K + I + ++ +K L ++ R E+ RL +E A
Sbjct: 316 VPLPTKEFLVNKIDDINALINHKWTNEEIKARLAKRNELRKR--FDPQERQRLANLVEEA 373
Query: 432 QSRHDEVDMERIKKRLQEL-----------------EASRDSKVKDAKAIRLAEMNRKNR 474
R D+ +E ++ L++L EA++ S +D RLAE NR+NR
Sbjct: 374 ARRGDDQRVEELQAELEKLGRERLAFKTSLGPSKNPEATKASSEQD----RLAERNRENR 429
Query: 475 VEN--------FKNASELKRVNTSLKAGE 495
N K ++ + + +LK GE
Sbjct: 430 RLNQEAVRKAQLKEKAKAREIEMALKRGE 458
>gi|322701164|gb|EFY92915.1| RNA polymerase II transcription elongation factor Rtf1p, putative
[Metarhizium acridum CQMa 102]
Length = 590
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 125/302 (41%), Gaps = 45/302 (14%)
Query: 262 DIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPI--YRLCMVRNVDATEPDR 319
D + + + R++ A+ P FE I GC++R+ +G + YR+ +++ + P
Sbjct: 244 DFERVRLGRNEFAQVCFTPGFESAITGCYIRIALGPHPETGVEQYRMAVIKGFTTSRP-- 301
Query: 320 SYKLENR----TTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMP 375
Y L T +Y+ G + + S + E ++ + ++P
Sbjct: 302 -YALTGPQGPFVTDQYVKAAHGK--AVKEFPFIAASSGKFTDNELNRYQVTCANENVKLP 358
Query: 376 SKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRH 435
+K + +K + I + +++ +K L ++ R E++R+ + L+ A +R
Sbjct: 359 TKSYLADKIDEINNLINHKWTSEEIKARLAKRNELKRR--FDPTERERVGKLLDEAVARG 416
Query: 436 DEVD------------MERIKKRLQELEASRDSKVKDA--KAIRLAEMNRKNRVEN---- 477
DE +R+ R L +SRD A + RLAE NR+NR N
Sbjct: 417 DETKAQELQEELEQLGTQRLAFRTT-LGSSRDMDGPRAATEQDRLAERNRENRRMNAELV 475
Query: 478 ----FKNASELKRVNTSLKAGEAGYDPFSRRW-TRSRNYY--------ISKPGEEVTAEA 524
K + + + +LK GE D SRR T+++ + +S G E + A
Sbjct: 476 RKAQLKEKARAREIEMALKRGEQVADDPSRRLRTKAKFVHDVNDTPQKLSANGSEASTPA 535
Query: 525 NG 526
NG
Sbjct: 536 NG 537
>gi|71022655|ref|XP_761557.1| hypothetical protein UM05410.1 [Ustilago maydis 521]
gi|46101426|gb|EAK86659.1| hypothetical protein UM05410.1 [Ustilago maydis 521]
Length = 598
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 79/177 (44%), Gaps = 21/177 (11%)
Query: 258 PTYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGR--SKNGP-----IYRLCMVR 310
P+ D+ + R ++ P + +++ G F+R G S + P +YR+ V
Sbjct: 294 PSLSDLNAARVTRDQIESRLYAPRWRDVLTGSFIRFSWGTRPSDSQPGRTETVYRIHQVS 353
Query: 311 NVDATEPDRSYKLENRTTCKYLNVTW-----GNESSAARWQMAMVSDSPPLEEEFKQWLR 365
+V +P + Y L + K+ NV GNE A ++ M+S E E ++W+
Sbjct: 354 DV-IEKPGKFYDLSADRSGKWCNVYLVFEHAGNEHEA---RIDMLSRGEFTESERERWIA 409
Query: 366 EVERN-----SGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNV 417
V+ + G++P K V K + ++K T + + +ML+ KK ++V
Sbjct: 410 FVKSSKGSAGGGKLPKKGAVSRKADELEKFFTSPLTEQDIGKMLETKKKLRVEAISV 466
>gi|254567249|ref|XP_002490735.1| Subunit of the RNA polymerase II-associated Paf1 complex
[Komagataella pastoris GS115]
gi|238030531|emb|CAY68455.1| Subunit of the RNA polymerase II-associated Paf1 complex
[Komagataella pastoris GS115]
Length = 476
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 111/261 (42%), Gaps = 46/261 (17%)
Query: 259 TYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNG-PIYRLCMVRNVDATEP 317
T DI +I R+ ++K++ P F++++ G ++R+ G NG Y++ V +
Sbjct: 197 TLSDINKIIFGRTAMSKYWYYPEFDDVVKGMYLRLNTGSGGNGFSPYKVVEVLGSQRIKG 256
Query: 318 DRSYKLENR-TTC-KYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMP 375
+Y L ++ C YL V + N+ R + + SDS EF +LRE++ +
Sbjct: 257 S-AYGLNSKENNCDMYLKVAFPNQKEMVR-PLFVFSDSSITHPEFDLFLRELDAEGLSVM 314
Query: 376 SKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRH 435
+DV KK +Q+ ELE A+ H
Sbjct: 315 DLRDVDYKKAQLQE-------------------------------------ELEEARDAH 337
Query: 436 DEVDMERIKKRLQELEASRDSKVKDAKAIRLAEMNRKNRVEN--FKNASELKRVNTSLKA 493
D + RI+ L+ + A +S V + + +++++N+ N F +E+ V
Sbjct: 338 DHERVARIEAELKSIGA--ESVVASKASSSMLKIDQRNKKLNNRFIRKAEMAAVEKRKLR 395
Query: 494 GEAGYDPFSRRWTRSRNYYIS 514
G + DPF R T +R +Y S
Sbjct: 396 GTSESDPFYRLATTARMFYKS 416
>gi|343426663|emb|CBQ70192.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 593
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 73/172 (42%), Gaps = 16/172 (9%)
Query: 258 PTYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNG-------PIYRLCMVR 310
P+ D+ I R ++ P + E ++G F R G+ + +YR+ V
Sbjct: 295 PSLADLNAARITRDQIESRLYAPRWREYLMGSFFRFSWGQRPHASNPARMETVYRIHQVS 354
Query: 311 NVDATEPDRSYKLENRTTCKYLNVTW-----GNESSAARWQMAMVSDSPPLEEEFKQWLR 365
V +P + Y L + + K+ NV G E A ++ M+S +E E ++WL
Sbjct: 355 EV-VEKPGKFYDLSDDRSGKWCNVYLVFEHAGQEHDA---KINMLSRGEFVESERERWLA 410
Query: 366 EVERNSGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNV 417
+ + R+P K V K + + K T + + ++L KK ++V
Sbjct: 411 MLHASKQRVPRKPVVARKADELDKFFTSPLTEQDIGKILDTKKRLRQEAISV 462
>gi|389640719|ref|XP_003717992.1| hypothetical protein MGG_00958 [Magnaporthe oryzae 70-15]
gi|351640545|gb|EHA48408.1| hypothetical protein MGG_00958 [Magnaporthe oryzae 70-15]
Length = 591
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 91/206 (44%), Gaps = 23/206 (11%)
Query: 260 YDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIG--RSKNGPIYRLCMVRNVDATEP 317
+DI+ I + R++ + P FE+ + GCFVR+ +G R +YR+ +V+ +
Sbjct: 260 LEDIQRIRMSRTRFGQVCFNPGFEKKMEGCFVRISVGQDRETQENVYRMAIVKGISKG-- 317
Query: 318 DRSYKLE----NRTTCKYLNVTWGNESSAAR-WQMAMVSDSPPLEEEFKQWLREVERNSG 372
+ Y + T +Y+ G A R W S+ P E E++++ S
Sbjct: 318 -KEYATDGAHGQIITDQYVTAAHGK---AVRDWPFIACSNQPFTENEWRRYKTTCNAESV 373
Query: 373 RMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQ 432
+P + V K + + + ++ + ++ + ++ DRL+ E ++A+
Sbjct: 374 DLPMQSAVSRKLDELHSLLKHSWTEDELSAKIERVRKLKAKFQG----HDRLQLEQDIAE 429
Query: 433 SR----HDEVDMERIKKRLQELEASR 454
R HD+ + ++ +L+ +E R
Sbjct: 430 YRALGMHDKA--KELEDKLETMETPR 453
>gi|440471012|gb|ELQ40049.1| hypothetical protein OOU_Y34scaffold00462g3 [Magnaporthe oryzae
Y34]
Length = 635
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 91/205 (44%), Gaps = 23/205 (11%)
Query: 261 DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIG--RSKNGPIYRLCMVRNVDATEPD 318
+DI+ I + R++ + P FE+ + GCFVR+ +G R +YR+ +V+ +
Sbjct: 305 EDIQRIRMSRTRFGQVCFNPGFEKKMEGCFVRISVGQDRETQENVYRMAIVKGISKG--- 361
Query: 319 RSYKLE----NRTTCKYLNVTWGNESSAAR-WQMAMVSDSPPLEEEFKQWLREVERNSGR 373
+ Y + T +Y+ G A R W S+ P E E++++ S
Sbjct: 362 KEYATDGAHGQIITDQYVTAAHGK---AVRDWPFIACSNQPFTENEWRRYKTTCNAESVD 418
Query: 374 MPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQS 433
+P + V K + + + ++ + ++ + ++ DRL+ E ++A+
Sbjct: 419 LPMQSAVSRKLDELHSLLKHSWTEDELSAKIERVRKLKAK----FQGHDRLQLEQDIAEY 474
Query: 434 R----HDEVDMERIKKRLQELEASR 454
R HD+ + ++ +L+ +E R
Sbjct: 475 RALGMHDKA--KELEDKLETMETPR 497
>gi|145544170|ref|XP_001457770.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124425588|emb|CAK90373.1| unnamed protein product [Paramecium tetraurelia]
Length = 447
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 65/126 (51%), Gaps = 7/126 (5%)
Query: 263 IKEITIRRSKLAKWFMEPFFEELIVGCFVRVG---IGRSKNGPIYRLCMVRNVDATEPDR 319
I+ ++R ++ M+ + + +I G FV++ + R K+ Y + V + E ++
Sbjct: 119 IQNAQLKRDQIYYLLMKHYCDNVIEGSFVKINEPNLIRRKDQS-YAIAQV--LAVVEGEK 175
Query: 320 SYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQD 379
SY+LE T K L + +G A + ++S+ ++EF W + E N ++PSK +
Sbjct: 176 SYQLEQTQTYKLLKLQFGEVKDAKLRHITLISNQQIQKQEFAVWQKRCEENGIQIPSK-E 234
Query: 380 VLEKKE 385
L++KE
Sbjct: 235 YLQRKE 240
>gi|400597175|gb|EJP64910.1| plus-3 domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 609
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 80/199 (40%), Gaps = 13/199 (6%)
Query: 262 DIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPI--YRLCMVRNVDATEPDR 319
D + + + R++ A+ P FE I GCF+R+ +G + + YR+ +++ P
Sbjct: 245 DFERVRLGRNEFAQVCFTPGFEAAITGCFIRIALGPHPDTGVEQYRMAIIKGFTTGRP-- 302
Query: 320 SYKLE----NRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMP 375
Y L T +Y+ V G + + S E ++ + + P
Sbjct: 303 -YALSGPNGTFVTDQYVKVAHGK--AIKEFPFIAASSGRFTVNELNRYQVTCHNENVKTP 359
Query: 376 SKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRH 435
K + K + I + T ++ +K L + R AE+ R+ R LE A
Sbjct: 360 LKSVLNSKIDDINNLLTHNWTNEEIKARLARRNELRKR--FDPAERARVARLLEEATVAG 417
Query: 436 DEVDMERIKKRLQELEASR 454
D M+ ++ L +L A R
Sbjct: 418 DTERMQELQDELDKLGAQR 436
>gi|195477473|ref|XP_002100213.1| GE16284 [Drosophila yakuba]
gi|194187737|gb|EDX01321.1| GE16284 [Drosophila yakuba]
Length = 269
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 78/181 (43%), Gaps = 10/181 (5%)
Query: 234 DDEGSTGDGGMADSDDDGAPGSGRPTYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRV 293
DDE G P + R D ++++ + R ++ + P FE+ + GCFVRV
Sbjct: 31 DDENEAWAEGYEKPPPPDLPVTSR---DQLEQLRLSRHRIGLLLIRPAFEQAVTGCFVRV 87
Query: 294 GIGRSKNGPIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDS 353
+ + P +R+ V + E D YK+E T L + + E + ++ VS+
Sbjct: 88 NVNGQEELPDHRIAEVLGI--CELDFGYKVEQIPTNVALRLRY--EDLVMQHEINDVSNL 143
Query: 354 PPLEEEFKQWLREVERNSGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSR 413
++EF+ W + P+ V KK ++ N + S A ++Q S + R
Sbjct: 144 AFTQDEFELWRDNCVNQALSPPTTHMVTRKK--VELYNA-LQSEAKPLSLIQRTFSFALR 200
Query: 414 P 414
P
Sbjct: 201 P 201
>gi|451854717|gb|EMD68009.1| hypothetical protein COCSADRAFT_32969 [Cochliobolus sativus ND90Pr]
Length = 499
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 111/256 (43%), Gaps = 33/256 (12%)
Query: 249 DDGAPGSGR----PTYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGR-SKNGPI 303
DD P R T D + + + R ++ P FEE + G F RVG+G+ ++ +
Sbjct: 195 DDRVPDKVREDVPATLRDFESVRVGRGFFSEVCFYPGFEEALTGAFGRVGVGQDAQRRTL 254
Query: 304 YRLCMVRNVDATEPDRSYKLENR-----TTCKYLNVTWGNESSAARWQMAMVSDSPPLEE 358
Y++ ++ +P Y E + T +Y+ G S +Q +S+ E
Sbjct: 255 YKMAQIKGFSVGKP---YVFEGKDGKRIATDQYVIAQHG--SVKKDYQFQFMSNQRFTES 309
Query: 359 EFKQWLREVERNSGRMPSKQDVLEKKESIQKINTFVYSAATVK---------QMLQEKKS 409
+ + + + + ++PS+ + K + ++ + ++ A + L ++ S
Sbjct: 310 DLDIYRQSLAETNSKVPSQSFLKRKYDDLKALQNHYWTDADISARIAKSKKYAYLLQRSS 369
Query: 410 ASSRPLNV---------AAEKDRLRRELEVAQSRHDEVDMERIKKRLQELEASRDSKVKD 460
+ ++P AE +R R LE + R +++ +R KK Q+ EA+R ++
Sbjct: 370 SDAQPKIATQSETAAARVAELNRKNRILEAERVRKAQLEQQRQKKIEQKKEAARRKAEEE 429
Query: 461 AKAIRLAEMNRKNRVE 476
A+ + E +KN ++
Sbjct: 430 ARKAQEEEAQKKNALD 445
>gi|194887568|ref|XP_001976756.1| GG18631 [Drosophila erecta]
gi|190648405|gb|EDV45683.1| GG18631 [Drosophila erecta]
Length = 243
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 7/130 (5%)
Query: 234 DDEGSTGDGGMADSDDDGAPGSGRPTYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRV 293
DDE G P + R D ++++ + R ++ + P FE+ + GCFVRV
Sbjct: 31 DDENEAWMDGYEKPPPPDLPVTSR---DQLEQLQLSRHRIGLLLVRPSFEQAVTGCFVRV 87
Query: 294 GIGRSKNGPIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDS 353
I + P +R+ V + E D YK+E T L + + E + ++ VS+
Sbjct: 88 NINGQEELPDHRIAEV--LGTCELDFGYKVEQIPTNVALRLRY--EDLEVQHEINDVSNL 143
Query: 354 PPLEEEFKQW 363
+EEF+ W
Sbjct: 144 AFTQEEFELW 153
>gi|440490288|gb|ELQ69863.1| hypothetical protein OOW_P131scaffold00114g26 [Magnaporthe oryzae
P131]
Length = 643
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 91/205 (44%), Gaps = 23/205 (11%)
Query: 261 DDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIG--RSKNGPIYRLCMVRNVDATEPD 318
+DI+ I + R++ + P FE+ + GCFVR+ +G R +YR+ +V+ +
Sbjct: 304 EDIQRIRMSRTRFGQVCFNPGFEKKMEGCFVRISVGQDRETQENVYRMAIVKGISK---G 360
Query: 319 RSYKLE----NRTTCKYLNVTWGNESSAAR-WQMAMVSDSPPLEEEFKQWLREVERNSGR 373
+ Y + T +Y+ G A R W S+ P E E++++ S
Sbjct: 361 KEYATDGAHGQIITDQYVTAAHGK---AVRDWPFIACSNQPFTENEWRRYKTTCNAESVD 417
Query: 374 MPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQS 433
+P + V K + + + ++ + ++ + ++ DRL+ E ++A+
Sbjct: 418 LPMQSAVSRKLDELHSLLKHSWTEDELSAKIERVRKLKAK----FQGHDRLQLEQDIAEY 473
Query: 434 R----HDEVDMERIKKRLQELEASR 454
R HD+ + ++ +L+ +E R
Sbjct: 474 RALGMHDKA--KELEDKLETMETPR 496
>gi|195348050|ref|XP_002040564.1| GM19250 [Drosophila sechellia]
gi|194121992|gb|EDW44035.1| GM19250 [Drosophila sechellia]
Length = 261
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 78/181 (43%), Gaps = 10/181 (5%)
Query: 234 DDEGSTGDGGMADSDDDGAPGSGRPTYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRV 293
DDE T G P + R D ++ + + R ++ + P FE+ + GCFVRV
Sbjct: 31 DDENETWVNGYEKPATPDLPVTSR---DQLELLRLSRHRIGMLLVRPAFEQAVTGCFVRV 87
Query: 294 GIGRSKNGPIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDS 353
+ P +R+ V + E D YK+E T L + + E + ++ VS+
Sbjct: 88 NVSGQGELPDHRIAEVLGI--CELDFGYKVEQIPTNVALRLRY--EDLEMQHEINDVSNL 143
Query: 354 PPLEEEFKQWLREVERNSGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSR 413
+EEF+ W R+ N P L +K+ ++ N A + ++Q S + +
Sbjct: 144 AFTQEEFELW-RDNCVNQAISPPTTHTLTRKK-VELYNALQLEAKPLS-LIQRTFSFALK 200
Query: 414 P 414
P
Sbjct: 201 P 201
>gi|330914400|ref|XP_003296624.1| hypothetical protein PTT_06767 [Pyrenophora teres f. teres 0-1]
gi|311331185|gb|EFQ95316.1| hypothetical protein PTT_06767 [Pyrenophora teres f. teres 0-1]
Length = 501
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 33/162 (20%), Positives = 73/162 (45%), Gaps = 15/162 (9%)
Query: 249 DDGAPGSGR----PTYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKN-GPI 303
DD AP R T D + + + R ++ P FEE + G F RVG+G+ + +
Sbjct: 194 DDRAPEKAREELPATLRDFESVRVGRGFFSEVCFHPGFEEALTGAFGRVGVGQDQQRRTL 253
Query: 304 YRLCMVRNVDATEPDRSYKLENR-----TTCKYLNVTWGNESSAARWQMAMVSDSPPLEE 358
Y++ ++ + +P Y E + T +Y+ V G S +Q +S+ E
Sbjct: 254 YKMAQIKGFSSGKP---YIFEGKDGKRVATDQYVVVQHG--SVKKDYQFQFMSNQRFTES 308
Query: 359 EFKQWLREVERNSGRMPSKQDVLEKKESIQKINTFVYSAATV 400
+ + + + N+ ++P++ + K + ++ + ++ + +
Sbjct: 309 DLDTYRQSLTENNAKVPTQSFLKRKYDDLKALQNHYWTDSDI 350
>gi|195564835|ref|XP_002106017.1| GD16620 [Drosophila simulans]
gi|194203384|gb|EDX16960.1| GD16620 [Drosophila simulans]
Length = 241
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 77/181 (42%), Gaps = 10/181 (5%)
Query: 234 DDEGSTGDGGMADSDDDGAPGSGRPTYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRV 293
DDE T G P + R D ++ + + R ++ + P FE+ + GCFVRV
Sbjct: 31 DDENETWVNGYEKPATPDLPVTSR---DQLELLRLSRHRIGMLLVRPAFEQAVTGCFVRV 87
Query: 294 GIGRSKNGPIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDS 353
+ P +R+ V + E D YK+E T L + + E + ++ VS+
Sbjct: 88 NVSGQGELPDHRIAEVLGI--CELDFGYKVEQIPTNVALRLRY--EDLEMQHEINDVSNL 143
Query: 354 PPLEEEFKQWLREVERNSGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSR 413
+EEF+ W R+ N P L +K+ ++ N A + ++Q S R
Sbjct: 144 AFTQEEFELW-RDNCVNQAISPPTTHTLTRKK-VELYNALQLEANPLS-LIQRSFSFPLR 200
Query: 414 P 414
P
Sbjct: 201 P 201
>gi|295668507|ref|XP_002794802.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226285495|gb|EEH41061.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 704
Score = 46.6 bits (109), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 262 DIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPI-YRLCMVRNVD 313
DI+ + + RS A+ P F++ I CFVRV +G K+G YR+C ++ ++
Sbjct: 402 DIQRVKVGRSNFAQVCFYPGFDQAIADCFVRVVVGVKKDGENEYRVCSIKKLE 454
>gi|302653674|ref|XP_003018660.1| hypothetical protein TRV_07350 [Trichophyton verrucosum HKI 0517]
gi|291182319|gb|EFE38015.1| hypothetical protein TRV_07350 [Trichophyton verrucosum HKI 0517]
Length = 607
Score = 45.4 bits (106), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 82/389 (21%), Positives = 149/389 (38%), Gaps = 64/389 (16%)
Query: 232 HSDDEGSTGDGGMADSDDDGAPGSGRPTYDDIKEIT------IRRSKLAKWFMEPFFEEL 285
+DD ++G+ + D P YD E+ I RS A+ P F++
Sbjct: 249 EADDRDASGESEVEWDDKPQRRSVSPPRYDPPAELRELQRARIARSNFAQVCFYPGFDQA 308
Query: 286 IVGCFVRVGIGR--SKNGPIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAA 343
I C+ RV +G S P YR+ +++ +
Sbjct: 309 ISNCYTRVSLGPNLSTGKPEYRIGLIK------------------------------TEK 338
Query: 344 RWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKESIQKINTFVYSAATVKQM 403
+ S+SP E EF ++ + + + +MP+K V +K I ++ ++ +++
Sbjct: 339 EFPFIACSESPFTEAEFNRYRKTMAVDGLKMPTKSAVDKKVADINRLLAHDFTKEELEEK 398
Query: 404 LQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKRLQELEASR----DSKVK 459
L+ + + ++ L + +L R A + DE + L L + + VK
Sbjct: 399 LRRQGTNDNKQL--IYNRIQLERRRNEAIANKDEAAIAECDAELARLTGPKLAFGTTLVK 456
Query: 460 -----DAKAIRLAEMNRKNRVENFKNASELK--------RVNTSLKAGEAGYDPFSRRWT 506
+ RLAE+N +N+ N +N + + ++ GEA D F+R T
Sbjct: 457 PRPNEKTQQERLAELNMRNQKLNTENVRKAQLAERKAAKLAAAAVARGEAVADRFARVKT 516
Query: 507 RSRNYYISKPGEEV-----TAEANGDKNGVPGGANGEEGATGEVGMAATEAALEAAAGAG 561
R+R YY S G V A A+ + P A+ AT T ++ + A
Sbjct: 517 RARTYYESTDGHLVPVKPEAAIADRSRAITPTTASNNTDATNTPANGTTPRSVTPSKPAT 576
Query: 562 KLVDTNAPL--DLGTESNMLHDFELDISL 588
V P+ T+ + + +LDI +
Sbjct: 577 PKVYKGVPVIRHRPTDEDNIAALDLDIDI 605
>gi|226294976|gb|EEH50396.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 633
Score = 45.4 bits (106), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 262 DIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPI-YRLCMVR 310
DI+ + + RS A+ P F++ I CFVRV +G K+G YR+C ++
Sbjct: 339 DIQRVKVGRSNFAQVCFYPGFDQAIADCFVRVVVGVKKDGENEYRVCSIK 388
>gi|225678669|gb|EEH16953.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 631
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 262 DIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPI-YRLCMVR 310
DI+ + + RS A+ P F++ I CFVRV +G K+G YR+C ++
Sbjct: 337 DIQRVKVGRSNFAQVCFYPGFDQAIADCFVRVVVGVKKDGENEYRVCSIK 386
>gi|150864916|ref|XP_001383925.2| hypothetical protein PICST_57112 [Scheffersomyces stipitis CBS
6054]
gi|149386172|gb|ABN65896.2| predicted protein, partial [Scheffersomyces stipitis CBS 6054]
Length = 232
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 85/175 (48%), Gaps = 11/175 (6%)
Query: 347 MAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQE 406
+++ SDS EEF ++L E+E+ + DV +K + +Q S V +M+
Sbjct: 1 LSIFSDSSISHEEFDRYLHELEKTGETIDYVDDVNDKYDQLQAFFNRGLSDKDVNEMISR 60
Query: 407 KKSASSRP----LNVAAEKDRLRRELEVAQSRHDEVDMERIKKRLQELEA---SRDSKVK 459
K+ R + K RL EL++A+ + + I +L++L++ ++ +
Sbjct: 61 KQKLQGRDELSGYDAVTRKARLMDELKIAKQQANPQKAREIIDKLKKLDSMLLNQTTHNP 120
Query: 460 DAKAIRLAEMNRKNRVENFKNA--SELKRVNTSLKAGEAGYDPFSRRWTRSRNYY 512
+ A ++++N +NR N N +E+K NT+ G DPFSR T +R +Y
Sbjct: 121 SSSANVMSKVNERNRKLNSTNIRKAEIKSRNTATVTD--GGDPFSRLKTTTRIFY 173
>gi|396498493|ref|XP_003845250.1| hypothetical protein LEMA_P005580.1 [Leptosphaeria maculans JN3]
gi|312221831|emb|CBY01771.1| hypothetical protein LEMA_P005580.1 [Leptosphaeria maculans JN3]
Length = 496
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 105/235 (44%), Gaps = 26/235 (11%)
Query: 243 GMADSD-DDGAPGSGR----PTYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGR 297
G +D D DD AP R + D + + + R ++ P FEE + G F R+G+G+
Sbjct: 185 GESDVDWDDRAPEKAREEQPASIRDFESVRVGRGFFSEVCFYPGFEEAMTGTFGRIGVGQ 244
Query: 298 -SKNGPIYRLCMVRNVDATEPDRSYKLENR-----TTCKYLNVTWGNESSAARWQMAMVS 351
S +Y++ ++ +P Y E + T +Y+ G + +Q +S
Sbjct: 245 DSSRRTLYKMAQIKGFTTGKP---YVFEGKGGKKVATDQYVIAQHG--AVKKDYQFQFLS 299
Query: 352 DSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKESIQKINTFVYSAATVK-QMLQEKKSA 410
+ E + + + + + + ++P++ + K E ++ + ++ A + ++ + KK A
Sbjct: 300 NQRFTETDLETYRQSLVETNAKIPTQSFLQRKYEDLKSLQNHHWTDADISARIAKSKKYA 359
Query: 411 SSRPLNVAAEKDRLRRELEVAQSRHDEV-------DMERIKKRLQELEASRDSKV 458
+ A + R+ + E A +R E+ D ER++K +LE R K+
Sbjct: 360 HLLNRSNADAQPRIATQSETAAARVAELNRKNRLADAERVRK--VQLEQQRHMKM 412
>gi|189192847|ref|XP_001932762.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187978326|gb|EDU44952.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 501
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 32/162 (19%), Positives = 72/162 (44%), Gaps = 15/162 (9%)
Query: 249 DDGAPGSGR----PTYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKN-GPI 303
DD AP R T D + + + R ++ P FE+ + G F RVG+G+ + +
Sbjct: 194 DDRAPEKAREEQPATLRDFESVRVGRGFFSEVCFHPGFEDALTGAFGRVGVGQDQQRRTL 253
Query: 304 YRLCMVRNVDATEPDRSYKLENR-----TTCKYLNVTWGNESSAARWQMAMVSDSPPLEE 358
Y++ ++ + +P Y E + T +Y+ V G S +Q +S+ E
Sbjct: 254 YKMAQIKGFSSGKP---YVFEGKDGKRVATDQYVVVQHG--SVKKDYQFQFMSNQRFTES 308
Query: 359 EFKQWLREVERNSGRMPSKQDVLEKKESIQKINTFVYSAATV 400
+ + + + + ++P++ + K + ++ + ++ A +
Sbjct: 309 DLDTYRQSLTETNAKVPTQSFLKRKYDDLKALQNHYWTDADI 350
>gi|358055605|dbj|GAA98436.1| hypothetical protein E5Q_05122 [Mixia osmundae IAM 14324]
Length = 557
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 112/478 (23%), Positives = 199/478 (41%), Gaps = 67/478 (14%)
Query: 10 EAAGRTNSAGRNRHSASSSKRRR-EGSYSGSDSRDDDSDDNRGYGSRKPSGSQVPLKKRL 68
E A + + N SA+ KRRR E + GSD DDS D + P ++ +K+
Sbjct: 5 EIAAKASKRSMNGESAAGKKRRRTEPTSDGSDMDLDDSADEQEAAEVTPEPTKAKVKRAA 64
Query: 69 ---------------------------DPAERDDDQGSQEEGDYDGGASEHEGDSSNESD 101
+P + D D+ + E + + EG + +D
Sbjct: 65 PRAKTGKGSKKVLSKETVSDSEEEGPAEPEQDDADEDLESEDEVEAALYPLEGKYKDAAD 124
Query: 102 DDNHGQMTELEREMMIFERDDKKVDKNLRDKFRSRREERSTRSTKETPPLPSSRSARLAA 161
+T+++RE ++ ER+++K ++ D R ++ T P S+R +A
Sbjct: 125 RAYLMTLTQIQREEILAEREEEKQEQI--DAREIRALAQNAGKTNRAPARASTRKQTVAP 182
Query: 162 RSADRAAAKDDALNELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSPVKRKAFTPAGLSS 221
D+A DAL + R R++++ +R + + RK
Sbjct: 183 SKTDKAI---DALKKSRTDRIEKK----------TTRSSAAPK----RDRKPANEESDEE 225
Query: 222 SSQSESESRSHSDDEGSTGDGGMADSDDDGAPGSGRPTYDDIKEITIRRSKLAKWFMEPF 281
+Q+ ES S++E + G D T+ +I I + R +L +++ P+
Sbjct: 226 VAQAAQESEG-SEEETYSRRRGRVKVDKPTRAQEQEATHAEINSILVTRDQLTRYWPCPW 284
Query: 282 FEELIVGCFVR--VGIGRSKNGPIYRLCMVRNVDATEPDRSYKLE-NRTTCKYLNVTWGN 338
F E +VR VG+ +K +YRL + +V+ E Y+LE N T K L + G
Sbjct: 285 FAEWAKDAYVRVLVGVDDTKQN-VYRLSRILSVE--EAPTLYRLEDNCKTDKALKLAHG- 340
Query: 339 ESSAAR-WQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKESI-QKINTFVYS 396
SA R ++++ VS+SP + E ++ L+ V + R P +E+K I Q+ +
Sbjct: 341 --SAERIFEISKVSNSPAADSEVRR-LKSVLLSEKRKPITARQVEQKLPILQRYAQHAPT 397
Query: 397 AATVKQMLQEKK---SASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKRLQELE 451
A + + K + RP K RL E A+++ D + + +I L +LE
Sbjct: 398 EADITTRINVNKLDDAEYERPRR----KARLLEERAAAEAKKDTIALAKINVELTKLE 451
>gi|452000871|gb|EMD93331.1| hypothetical protein COCHEDRAFT_1131511 [Cochliobolus
heterostrophus C5]
Length = 498
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 99/237 (41%), Gaps = 45/237 (18%)
Query: 249 DDGAPGSGR----PTYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGR-SKNGPI 303
DD P R T D + + + R ++ P FEE + G F RVG+G+ ++ +
Sbjct: 195 DDRVPDKVREDVPATLRDFESVRVGRGFFSEVCFHPGFEEALTGAFGRVGVGQDAQRRTL 254
Query: 304 YRLCMVRNVDATEPDRSYKLENR-----TTCKYLNVTWGNESSAARWQMAMVSDSPPLEE 358
Y++ ++ +P Y E + T +Y+ G S +Q +S+ E
Sbjct: 255 YKMAQIKGFSVGKP---YVFEGKDGKRIATDQYVIAQHG--SVKKDYQFQFMSNQRFTES 309
Query: 359 EFKQWLREVERNSGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVA 418
+ + + + + ++PS+ + K + ++ + ++ A + S+R
Sbjct: 310 DLDIYRQSLAETNSKVPSQSFLKRKYDDLKALQNHYWTDADI----------SAR----- 354
Query: 419 AEKDRLRRELEVAQSRHDEVDMERIKKRLQELEASRDSKVKDAKAIRLAEMNRKNRV 475
+A+S+ ++R Q A++ +A A R+AE+NRKNR+
Sbjct: 355 -----------IAKSKKYAHLLQRSSSDAQPKIATQ----SEAAAARVAELNRKNRI 396
>gi|346326272|gb|EGX95868.1| RNA polymerase II transcription elongation factor Rtf1p, putative
[Cordyceps militaris CM01]
Length = 607
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 119/297 (40%), Gaps = 47/297 (15%)
Query: 280 PFFEELIVGCFVRVGIGRSKNGPI--YRLCMVRNVDATEPDRSYKLE----NRTTCKYLN 333
P FE I GCF+R+ +G + I YR+ +++ R+Y L T +Y+
Sbjct: 265 PGFEPAITGCFIRIALGPHPDTGIEQYRMAIIKGFTTG---RAYALSGPNGTFVTDQYVK 321
Query: 334 VTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKESIQKINTF 393
G + + S E E ++ + + P K + K + I + T
Sbjct: 322 AAHGK--AVKEFPFIAASSGKFTENEMNRYQVTCHNENVKTPIKTVLNSKIDQINNLLTH 379
Query: 394 VYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKRLQELEAS 453
++ +K + + R AE+ R+ R LE A D+ M+ +++ L +L +
Sbjct: 380 NWTNEEIKARVARRNELRKR--FDPAERARVARLLEEATVGGDDDRMQELQEELDKLGSQ 437
Query: 454 R---DSKVKDAK---------AI--------RLAEMNRKNRVEN--------FKNASELK 485
R + + AK AI RLA N++NR N + + ++
Sbjct: 438 RLAFKTSLGPAKSSAYDSNGGAITKMSTEQDRLAARNKENRRMNQEGVRKAQLREKARMR 497
Query: 486 RVNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVT-AEANGDK--NGV--PGGANG 537
SL GE + SRR R++ ++ E V A+ G K +GV P ANG
Sbjct: 498 ENELSLSRGEMVKEDPSRRL-RTKAKFVHDVNETVAGADGGGSKAASGVSTPATANG 553
>gi|321259824|ref|XP_003194632.1| rtf1 protein [Cryptococcus gattii WM276]
gi|317461104|gb|ADV22845.1| rtf1 protein, putative [Cryptococcus gattii WM276]
Length = 532
Score = 42.7 bits (99), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 80/161 (49%), Gaps = 8/161 (4%)
Query: 258 PTYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVR-VGIGRSKNG-PIYRLCMVRNVDAT 315
P +++ + R +L + FE++I G +VR + R ++G P YRL + +VD +
Sbjct: 223 PNRAELESARVSRYELVDMMHKDGFEDIITGAYVRIISPDRDEHGRPKYRLYKIADVDDS 282
Query: 316 EPDRSYKLENR----TTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNS 371
SY +E + + L V +G S++ ++MA VS+ E EF+++ + +
Sbjct: 283 GQFGSYSIEYQGRQIRETRALLVKYG--SASRLFRMADVSNGVIEESEFQRFSMTNQADG 340
Query: 372 GRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASS 412
+ P + + +K + I+ + ++A + + + +KS S
Sbjct: 341 VKTPKRSFLKKKHDEIKALRERPMTSAEIDRRVDSRKSQES 381
>gi|405121164|gb|AFR95933.1| rtf1 protein [Cryptococcus neoformans var. grubii H99]
Length = 532
Score = 42.4 bits (98), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 95/193 (49%), Gaps = 9/193 (4%)
Query: 258 PTYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVR-VGIGRSKNG-PIYRLCMVRNVDAT 315
P +++ + R +L + FE++I G +VR + R ++G P YRL + +VD +
Sbjct: 223 PNRAELESARVSRYELVDMMHKDGFEDVITGAYVRIISPERDEHGRPKYRLYKIADVDES 282
Query: 316 EPDRSYKLENR----TTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNS 371
SY +E + + L V +G S++ ++MA VS+ E EF+++ + +
Sbjct: 283 GQFGSYSIEYQGRQIRESRALLVKYG--SASRLFRMADVSNGVIEESEFQRFSMTNQADG 340
Query: 372 GRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEK-DRLRRELEV 430
+ P + + +K + I+ + ++A + + + +KS S + K +L ++
Sbjct: 341 VKAPKRSFLKKKHDEIKALRERPMTSAEIDRRVDSRKSQESSFTRASLLKIHQLMNTRDL 400
Query: 431 AQSRHDEVDMERI 443
A R+D V +E++
Sbjct: 401 ALRRNDHVMVEKL 413
>gi|169606160|ref|XP_001796500.1| hypothetical protein SNOG_06116 [Phaeosphaeria nodorum SN15]
gi|111064827|gb|EAT85947.1| hypothetical protein SNOG_06116 [Phaeosphaeria nodorum SN15]
Length = 498
Score = 42.4 bits (98), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 40/202 (19%), Positives = 89/202 (44%), Gaps = 19/202 (9%)
Query: 262 DIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGR-SKNGPIYRLCMVRNVDATEPDRS 320
DI+ + + R ++ P FE+ + G F R+G+G+ S+ +Y++ ++ +P
Sbjct: 211 DIESVRVGRGFFSEVCFHPGFEDAMTGTFARLGVGQDSQRRTLYKMAQIKGFSTGKP--- 267
Query: 321 YKLENR-----TTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGRMP 375
Y E + T +Y G S + +S+ E++ + + N+ ++P
Sbjct: 268 YVFEGKNGKRIATDQYAIAQHG--SVKKDYSFQFMSNQRFTEQDLDIYKASLTENNSKLP 325
Query: 376 SKQDVLEKKESIQKINTFVYSAATVK-QMLQEKKSASSRPLNVAAEKDRLRRELEVAQSR 434
++ + K + + ++ A + ++ + KK A + + R+ + E A +R
Sbjct: 326 TQSYLQRKYNDLMGLQNHHWTDADISARIAKTKKFAHLLQRQNSDSQPRIATQSEAAAAR 385
Query: 435 HDEV-------DMERIKKRLQE 449
E+ + ER+KK LQ+
Sbjct: 386 VAELNRKTRINEAERVKKTLQD 407
>gi|119612897|gb|EAW92491.1| Rtf1, Paf1/RNA polymerase II complex component, homolog (S.
cerevisiae), isoform CRA_b [Homo sapiens]
Length = 412
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 85/165 (51%), Gaps = 8/165 (4%)
Query: 314 ATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWLREVERNSGR 373
E + Y+L T K L + GN+ R + VS+ E EF +W + +
Sbjct: 232 VVETAKVYQLGGTRTNKGLQLRHGNDQRVFR--LEFVSNQEFTESEFMKWKEAMFSAGMQ 289
Query: 374 MPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQS 433
+P+ ++ +K+ SI++ + ++ ++++++EK+ P N A +K +L +E +A+
Sbjct: 290 LPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKAMAED 349
Query: 434 RHDEVDMERIKKRLQELEASRDS----KVKDAKAIRLAEMNRKNR 474
D+ ++I+ +L ELE ++ + K+ AI + +N++NR
Sbjct: 350 LGDQDKAKQIQDQLNELEERAEALDRQRTKNISAI--SYINQRNR 392
>gi|81051845|gb|ABB55288.1| sucrose transporter [Asparagus officinalis]
Length = 793
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 42/87 (48%), Gaps = 17/87 (19%)
Query: 108 MTELEREMMIFERDDKKVDKNLRDKFRSRREERSTRSTKETPPL----PSSRSARLAARS 163
M+EL+REM++ ER K D L+ K R + ++ KE+PP PS RS +
Sbjct: 418 MSELDREMILAERSTKIDDYMLKKKARETSSKVEMKTRKESPPPLRGRPSLRSDK----- 472
Query: 164 ADRAAAKDDALNELRAKRLKQQDPEAH 190
ALNELRAKR E +
Sbjct: 473 --------PALNELRAKRYPNAKSELY 491
>gi|403366048|gb|EJY82815.1| hypothetical protein OXYTRI_19568 [Oxytricha trifallax]
Length = 642
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 94/241 (39%), Gaps = 64/241 (26%)
Query: 259 TYDDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKNGPIYRLCMVRNVDATEPD 318
T D I + R +L E +F+E+IVGC +V S YR+C ++ A
Sbjct: 253 TLVDAIPIILTRKQLISMLDEDYFDEIIVGCLCKVTYQNS-----YRVCKIKK--AQNAL 305
Query: 319 RSYKLENRT--------------TCKYLNVTWGNESSAARWQMAMVSDSPPLEEEFKQWL 364
Y +EN T K L + WG S + ++++VS+ +E +
Sbjct: 306 SEYVVENPVRQVGQNKIALPAIYTKKELILKWG--SLEKKMKISLVSNQAVSIDELLAF- 362
Query: 365 REVERNSGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKSASSRP---------- 414
+++ SG QK+ T + A +QM K + S+
Sbjct: 363 QQMRVKSG---------------QKLITKAFCEAKTRQMNILKNTQKSQESVMKRIRERV 407
Query: 415 -----------LNVAAEKDRLRRELEVAQSRHDEVDMERIKKRLQELEASRDSKVKDAKA 463
+N+ EK +LR E+++ +S E + +K + +E ++KD K
Sbjct: 408 RYKIMKGDISGMNLLVEKQKLRTEIQILESEIAEQKKKSVKAKAYTMEL----QLKDTKE 463
Query: 464 I 464
I
Sbjct: 464 I 464
>gi|68471125|ref|XP_720339.1| hypothetical protein CaO19.7047 [Candida albicans SC5314]
gi|46442203|gb|EAL01494.1| hypothetical protein CaO19.7047 [Candida albicans SC5314]
Length = 233
Score = 39.7 bits (91), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 92/182 (50%), Gaps = 22/182 (12%)
Query: 347 MAMVSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKESIQKINTFVYSAATV------ 400
M++ SDSP ++EF ++L+E+ + + DV K + + K YS
Sbjct: 1 MSIFSDSPINQDEFDRYLKELNKTDEMIEFLDDVNSKFDELTKF----YSKGLTDKDIND 56
Query: 401 ----KQMLQEKKSASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKRLQELEASRDS 456
KQ +QEKK S V + + L R L++A+ + + ++ I ++L++++ +S
Sbjct: 57 MIARKQKIQEKKGNISMYDAVNRKTNLLDR-LKIAKQQGNLEKVQEIIEKLKDIDEILES 115
Query: 457 KVKD---AKAIR-LAEMNRKNRVENFKNA--SELKRVNTSLKAGEAGYDPFSRRWTRSRN 510
+ + +K++ + +N +NR N N +E+K +T+ + G DPFSR T +R
Sbjct: 116 QTSNQPTSKSLNTMTLVNERNRKLNSTNIRKAEIKFKSTAAQQQSDG-DPFSRLKTATRM 174
Query: 511 YY 512
+Y
Sbjct: 175 FY 176
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.310 0.127 0.355
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,327,310,337
Number of Sequences: 23463169
Number of extensions: 474655802
Number of successful extensions: 2529067
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 659
Number of HSP's successfully gapped in prelim test: 14813
Number of HSP's that attempted gapping in prelim test: 2337908
Number of HSP's gapped (non-prelim): 115225
length of query: 643
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 494
effective length of database: 8,863,183,186
effective search space: 4378412493884
effective search space used: 4378412493884
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 80 (35.4 bits)