BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006482
(643 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6UVJ0|SAS6_HUMAN Spindle assembly abnormal protein 6 homolog OS=Homo sapiens
GN=SASS6 PE=1 SV=1
Length = 657
Score = 39.3 bits (90), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 73/150 (48%), Gaps = 15/150 (10%)
Query: 316 LSESLAAENSSLTDSYNQQRSVVNQLKSEMEKLQEEIKVQLVELESFRNEYANVRLECNA 375
LSE L A N LT+ + S + +LK+++ ++EE++ E+ S R E + + +EC+
Sbjct: 254 LSE-LEAANKDLTERKYKGDSTIRELKAKLSGVEEELQRTKQEVLSLRRENSTLDVECHE 312
Query: 376 ADERAKILASEVIGLEEKA-----LRLRSNE---------LKLERQLENSQSEISSYKKK 421
++ L ++V LE++ L LR+ E + LE E +Q ++ +
Sbjct: 313 KEKHVNQLQTKVAVLEQEIKDKDQLVLRTKEAFDTIQEQKVVLEENGEKNQVQLGKLEAT 372
Query: 422 ISSLEKERQDFQSTIEALQEEKKMMQSKLR 451
I SL E I+ LQ + K + KL+
Sbjct: 373 IKSLSAELLKANEIIKKLQGDLKTLMGKLK 402
>sp|P58660|CAR10_MOUSE Caspase recruitment domain-containing protein 10 OS=Mus musculus
GN=Card10 PE=2 SV=1
Length = 1021
Score = 39.3 bits (90), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 87/175 (49%), Gaps = 10/175 (5%)
Query: 286 NEDFAALEQHIEDLTQEKFALQRSLEASRALSESLAAENSSLTDSYNQQRSVVNQLKSEM 345
N+ A Q +++ Q++ + + + R L + L + DS + ++ ++ E+
Sbjct: 281 NQRLTASLQELQEGLQQEMSRPGAAGSERILLDILEHDWREAQDSRQELCQKLHAVQGEL 340
Query: 346 EKLQEEIKVQLVELESFRNEYANVRLECNAADER-AKILAS--EVIGLEEKALRLRSNEL 402
+ +E L E+E R ++ + +C+ R A +LA E+ ++A++ R
Sbjct: 341 QWAEELRDKYLQEMEDLRLKHRTLLKDCDLYKHRMATVLAQLEEIEKERDQAIQSRDRI- 399
Query: 403 KLERQLENSQSEISS--YKKKISSLEKERQDFQSTIEALQEEKKMMQSKLRKASG 455
QL+ SQS I Y+K++ LE ER + +T+ +L+ K M++++L++ G
Sbjct: 400 ----QLQYSQSLIEKDQYRKQVRGLEAERDELLTTVTSLEGTKAMLEAQLQRTQG 450
>sp|Q5ZMV2|SAS6_CHICK Spindle assembly abnormal protein 6 homolog OS=Gallus gallus
GN=SASS6 PE=2 SV=1
Length = 640
Score = 38.5 bits (88), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 72/159 (45%), Gaps = 14/159 (8%)
Query: 307 QRSLEASRALSESLAAENSSLTDSYNQQRSVVNQLKSEMEKLQEEIKVQLVELESFRNEY 366
QRS++ + L N LT+ + S V +LK+++ +++E + E+ S R E
Sbjct: 249 QRSIQQLQNRLSELEVINKDLTERRYKGDSTVRELKAKLSGVEDECQRAKQEVVSLRREN 308
Query: 367 ANVRLECNAADERAKILASEVIGLEEKA-----LRLRSNE---------LKLERQLENSQ 412
+ EC+ ++ L + V LE++ L +R+ E + LE E Q
Sbjct: 309 TTLDAECHEKEKFINQLQTRVAVLEQEIKDKDQLVIRTKEVLDATQEQKVILEENTEKKQ 368
Query: 413 SEISSYKKKISSLEKERQDFQSTIEALQEEKKMMQSKLR 451
S I + I SL E I+ LQE+ K + SKL+
Sbjct: 369 SHIEKLETTIKSLSAELLKANEIIKKLQEDLKTLMSKLK 407
>sp|Q80UK7|SAS6_MOUSE Spindle assembly abnormal protein 6 homolog OS=Mus musculus
GN=Sass6 PE=2 SV=2
Length = 654
Score = 38.1 bits (87), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 14/159 (8%)
Query: 307 QRSLEASRALSESLAAENSSLTDSYNQQRSVVNQLKSEMEKLQEEIKVQLVELESFRNEY 366
QR++ ++ L A N LT+ + S V +LK+++ ++EE++ E+ S R E
Sbjct: 244 QRNIHQLQSRLSELEAANKELTERKYKGDSTVRELKAKLAGVEEELQRAKQEVLSLRREN 303
Query: 367 ANVRLECNAADERAKILASEVIGLEEKA-----LRLRSNE---------LKLERQLENSQ 412
+ EC+ ++ L ++V LE++ L LR+ E + LE E +Q
Sbjct: 304 CTLDTECHEKEKHINQLQTKVAVLEQEIKDKDQLVLRTKEAFDTIQEQKVALEENGEKNQ 363
Query: 413 SEISSYKKKISSLEKERQDFQSTIEALQEEKKMMQSKLR 451
++ + I SL E I+ LQ + K + KL+
Sbjct: 364 IQLGKLEATIKSLSAELLKANEIIKKLQGDLKTLMGKLK 402
>sp|O14248|TEA3_SCHPO Tip elongation aberrant protein 3 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=tea3 PE=1 SV=1
Length = 1125
Score = 38.1 bits (87), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 79/172 (45%), Gaps = 14/172 (8%)
Query: 301 QEKFALQRSLEASRALSESLAAENSSLTDSYNQQRSVVNQ-------LKSEMEKLQEEIK 353
Q+ LQ+ L+ + + SE L + N L Y++ RSV + L+ E E LQ +I
Sbjct: 674 QKNTELQQLLKQNESASELLKSRNEKLCVDYDKLRSVFEEDSSKILSLQKENENLQSQIL 733
Query: 354 VQLVELESFRN-----EYANVRLECNAADERAKI-LASEVIGLEEKALRLRSNE-LKLER 406
EL +R+ EY N LE + ++ + + VI AL + + L E
Sbjct: 734 QISEELVDYRSRCEALEYGNYELETKLIEMHDRVEMQTNVIEASASALDVSNTAILSFED 793
Query: 407 QLENSQSEISSYKKKISSLEKERQDFQSTIEALQEEKKMMQSKLRKASGSGK 458
L + E S+ ++K +L+ E ++ + +E LQ ++S L ++ K
Sbjct: 794 SLRRERDEKSTLQQKCLNLQYEYENVRIELENLQSRALELESALEQSVSDAK 845
>sp|A2AM05|CNTLN_MOUSE Centlein OS=Mus musculus GN=Cntln PE=1 SV=1
Length = 1397
Score = 37.0 bits (84), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 54/103 (52%)
Query: 333 QQRSVVNQLKSEMEKLQEEIKVQLVELESFRNEYANVRLECNAADERAKILASEVIGLEE 392
Q R V+ L+ E E+L+ L +LE RN+ A+ R E ++ D R K+L +I ++
Sbjct: 235 QNRLVIKNLEEENERLRTRCTDLLNDLEKLRNQEAHWRKEKHSVDTRVKVLEENLIEAKK 294
Query: 393 KALRLRSNELKLERQLENSQSEISSYKKKISSLEKERQDFQST 435
+ ++ + +QL N Q+E+ I+ + KE Q+ Q+
Sbjct: 295 EIESAQTKYNVVSQQLNNKQAELLQKDMDITLIRKELQELQNV 337
>sp|Q9Y5S2|MRCKB_HUMAN Serine/threonine-protein kinase MRCK beta OS=Homo sapiens
GN=CDC42BPB PE=1 SV=2
Length = 1711
Score = 36.2 bits (82), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 82/178 (46%), Gaps = 22/178 (12%)
Query: 259 SDRGDIRRLGSNESSIENQHGFYSTKHNEDFAALEQHIEDLTQEKFALQRSLEASRALSE 318
SDRG ++ + + + +++ +H+ A E+ I L QEK L R L+ S +
Sbjct: 410 SDRGSLKSIMQSNTLTKDEDVQRDLEHSLQMEAYERRIRRLEQEKLELSRKLQESTQTVQ 469
Query: 319 SLAAENSSLTDSYNQQRSVVNQLKSEMEKLQEEIKVQLVELESFRNEYANV-RLECNAAD 377
SL + +L++S + E++KL EEI E +N+ A+ RLE D
Sbjct: 470 SLHGSSRALSNSNRDK---------EIKKLNEEI-------ERLKNKIADSNRLERQLED 513
Query: 378 ERAKILASE-----VIGLEEKALRLRSNELKLERQLENSQSEISSYKKKISSLEKERQ 430
A E + GLE++ +R + +L +QL + + S K++ ++R+
Sbjct: 514 TVALRQEREDSTQRLRGLEKQHRVVRQEKEELHKQLVEASERLKSQAKELKDAHQQRK 571
>sp|Q3KR99|SPDLY_RAT Protein Spindly OS=Rattus norvegicus GN=Spdl1 PE=2 SV=1
Length = 597
Score = 35.4 bits (80), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 9/80 (11%)
Query: 297 EDLTQEKFALQRSLEASRALSESLAAENSSLTDSYNQQRSVVNQLKSEMEKLQEEIKVQL 356
E+ QEK+ALQR +E + ESL+ E +L QQ++ + QL+ ++ + +
Sbjct: 52 ENYNQEKYALQREVELKSRMLESLSCECEALR---QQQKAQLEQLEMQLHRSHRQ----- 103
Query: 357 VELESFRNEYANVRLECNAA 376
E+ RN+ N+++E + A
Sbjct: 104 -EVHGLRNKLENLKVELDEA 122
>sp|P31111|ZIP1_YEAST Synaptonemal complex protein ZIP1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ZIP1 PE=1 SV=2
Length = 875
Score = 34.3 bits (77), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 69/133 (51%), Gaps = 16/133 (12%)
Query: 334 QRSVVNQLKSEMEKLQEEIKVQLVELESFRNEYANVRLEC-NAADERAKILASEVIGL-- 390
Q +V L SE + L++ I+ QLVE++ + +LE +E+ + L EV+ L
Sbjct: 594 QNEIVKALVSENDTLKQRIQ-QLVEIKENEQKDHTTKLEAFQKNNEQLQKLNVEVVQLKA 652
Query: 391 -----EEKALRLRSNELKLERQLENSQSEISSYKKKISSLEKERQD-------FQSTIEA 438
EE+ L++ K E +E S S++ + K+++ L+ E+QD Q +E+
Sbjct: 653 HELELEEQNRHLKNCLEKKETGVEESLSDVKTLKQQVIVLKSEKQDITAEKLELQDNLES 712
Query: 439 LQEEKKMMQSKLR 451
L+E K +Q K++
Sbjct: 713 LEEVTKNLQQKVQ 725
>sp|Q6AW69|CGNL1_MOUSE Cingulin-like protein 1 OS=Mus musculus GN=Cgnl1 PE=1 SV=2
Length = 1298
Score = 33.5 bits (75), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 80/179 (44%), Gaps = 23/179 (12%)
Query: 282 STKHNEDF--AALEQHIEDLTQEKFALQRSLEASRALSESLAAENSSLTDSYNQQRSVVN 339
STK +ED AL IE+L Q K LQ L A + L LT + V+
Sbjct: 713 STKRSEDREKGAL---IEELLQAKQDLQDLLIAKEEQEDLLRKRERELTALKGALKEEVS 769
Query: 340 QLKSEMEKLQEEIKVQLVELESFRN--EYANVRLECNA------------ADERAKILAS 385
EM+KL+E+ EL++FR E A +E A AD R K+L
Sbjct: 770 SHDQEMDKLKEQYDA---ELQAFRESVEEATKNVEVLASRSNSSEQSQAEADLREKVLKE 826
Query: 386 EVIGLEEKALRLRSNELKLERQLENSQSEISSYKKKISSLEKERQDF-QSTIEALQEEK 443
E L+ + L +L+RQ+E+ + + + K+ + E E Q ++ + A +EEK
Sbjct: 827 ENEKLQGRIAELERRAAQLQRQMEDVKGDEAQAKETLRKCESEVQQLEEALVHARKEEK 885
>sp|Q5HZI1|MTUS1_MOUSE Microtubule-associated tumor suppressor 1 homolog OS=Mus musculus
GN=Mtus1 PE=1 SV=2
Length = 1210
Score = 33.5 bits (75), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 81/179 (45%), Gaps = 25/179 (13%)
Query: 291 ALEQHIEDLTQEKFALQRSLEASRALSESLAAENSSLTDSY-------NQQRS-----VV 338
AL+QH + L+QE +L+ L A+ + E L + L +Y NQQ +
Sbjct: 886 ALKQH-KTLSQELVSLRGELVAASSACEKLEKARADLQTAYQEFVQKLNQQHQTDRTELE 944
Query: 339 NQLK----SEMEKLQEEIKVQLVELESFRNEYANVRLECNAADERAKILA----SEVIGL 390
N+LK +E EKLQ + + E E ++ + NAA E K+ SE + L
Sbjct: 945 NRLKDLYTAECEKLQ---SIYIEEAEKYKTQLQEQFDNLNAAHETTKLEIEASHSEKVEL 1001
Query: 391 EEKALRLRSNELKLERQLENSQSEISSYKKKISSLEKERQDFQSTIEALQEEKKMMQSK 449
+K +E+K ++E E +K SLEK+ D +S +AL E K + K
Sbjct: 1002 LKKTYETSLSEIKKSHEMEKKSLE-DLLNEKQESLEKQINDLKSENDALNERLKSEEQK 1059
>sp|Q90988|SMC2_CHICK Structural maintenance of chromosomes protein 2 OS=Gallus gallus
GN=SMC2 PE=2 SV=1
Length = 1189
Score = 32.7 bits (73), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 54/104 (51%), Gaps = 7/104 (6%)
Query: 344 EMEKLQEEIKVQLVELESFRNEYANVRLECNAADERAKILASEVIGLEEKALRLR----- 398
+M++ Q+E++ ++ELE + E A+ + + AA + L +V LE +A++ R
Sbjct: 811 KMKEKQQEVEALVLELEQLKQEQASYKQQSEAAQQAIASLKEQVSALEAEAVKTRESLKN 870
Query: 399 -SNELKLERQL-ENSQSEISSYKKKISSLEKERQDFQSTIEALQ 440
NEL E+ L E +I + KI ++ + Q +I AL+
Sbjct: 871 AENELSSEKGLMEERTKDIKAKSAKIEKYREQNNELQLSINALE 914
>sp|Q6PCJ1|DCTN1_XENLA Dynactin subunit 1 OS=Xenopus laevis GN=dctn1 PE=2 SV=1
Length = 1232
Score = 32.7 bits (73), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 68/129 (52%), Gaps = 9/129 (6%)
Query: 321 AAENSSLTDSYNQQRSVVNQLKSEMEKLQEEIKVQLVELESFRNEYANVRLECNAADERA 380
A E ++L ++R+ L+ E++ L+++++ ++LE ++E + A+ +
Sbjct: 261 AIEMATLDKEMAEERA--ESLQQEVDTLKDKVEEHKIDLEILKHEIEEKGSDGAASSYQV 318
Query: 381 KILASEVIGLEEKALRLR-------SNELKLERQLENSQSEISSYKKKISSLEKERQDFQ 433
K L + L+E +R+R +K+++Q+E +E+ + +++ L++E +
Sbjct: 319 KQLEEQNARLKEALVRMRDLSASEKQEHIKVQKQMEKKNTELDTLRQQKEKLQEEASHME 378
Query: 434 STIEALQEE 442
TI+ L+E+
Sbjct: 379 KTIDELKEQ 387
>sp|Q7ZVT3|SAS6_DANRE Spindle assembly abnormal protein 6 homolog OS=Danio rerio GN=sass6
PE=1 SV=1
Length = 627
Score = 32.7 bits (73), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 93/213 (43%), Gaps = 29/213 (13%)
Query: 265 RRLGSNESSIENQHGFYSTKHNEDFAA-----------LEQHIEDLTQE-KFALQRSLEA 312
R L S +Q S++H +D A L+Q E L QE + + RS +
Sbjct: 194 RELDKLRSEWTSQTTSLSSRHMQDLTAEREKALETQSRLQQQNEQLRQELESSHHRSTQQ 253
Query: 313 SRALSESLAAENSSLTDSYNQQRSVVNQLKSEMEKLQEEIKVQLVELESFRNEYANVRLE 372
+ L N L D + S + LK+++ L+EE + ++ S R E + + E
Sbjct: 254 LQTKVSELETANRELIDKKYKSDSTIRDLKAKLTSLEEECQRSKQQVLSLRRENSALDSE 313
Query: 373 CNAADERAKILASEVIGLEEKA-----LRLRSNELKLERQLENSQSEISSYKKKISSLEK 427
C+ + L + V LE++ L LR+ E+ LE +Q + +S + S +
Sbjct: 314 CHEKERLLNQLQTRVAVLEQEIKDKDQLVLRTKEV-----LEATQQQKNSVEGNAESKQL 368
Query: 428 ERQDFQSTIEALQEEKKMMQSKLRKASGSGKSI 460
+ +ST+++L EE L KA+G K +
Sbjct: 369 QISKLESTVKSLSEE-------LIKANGIIKKL 394
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.306 0.121 0.319
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 217,147,572
Number of Sequences: 539616
Number of extensions: 8872767
Number of successful extensions: 45714
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 530
Number of HSP's successfully gapped in prelim test: 2423
Number of HSP's that attempted gapping in prelim test: 32870
Number of HSP's gapped (non-prelim): 9529
length of query: 643
length of database: 191,569,459
effective HSP length: 124
effective length of query: 519
effective length of database: 124,657,075
effective search space: 64697021925
effective search space used: 64697021925
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (22.0 bits)
S2: 65 (29.6 bits)