Query 006484
Match_columns 643
No_of_seqs 443 out of 2482
Neff 8.3
Searched_HMMs 46136
Date Thu Mar 28 23:56:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006484.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/006484hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02418 delta-1-pyrroline-5-c 100.0 2E-110 5E-115 950.5 70.9 635 4-643 5-646 (718)
2 TIGR01092 P5CS delta l-pyrroli 100.0 2E-109 4E-114 945.1 69.2 629 10-643 3-640 (715)
3 PRK00197 proA gamma-glutamyl p 100.0 3E-73 6.6E-78 614.8 39.2 352 291-643 4-361 (417)
4 cd07079 ALDH_F18-19_ProA-GPR G 100.0 1E-72 2.2E-77 608.7 37.3 348 295-643 2-355 (406)
5 KOG2451 Aldehyde dehydrogenase 100.0 2.9E-71 6.2E-76 549.5 29.0 352 267-643 43-452 (503)
6 KOG2450 Aldehyde dehydrogenase 100.0 1.3E-71 2.9E-76 578.3 26.1 349 270-643 43-449 (501)
7 COG1012 PutA NAD-dependent ald 100.0 3E-69 6.6E-74 587.9 35.6 349 268-643 19-420 (472)
8 TIGR00407 proA gamma-glutamyl 100.0 5.5E-69 1.2E-73 574.6 36.7 343 300-643 1-353 (398)
9 PRK11241 gabD succinate-semial 100.0 6.2E-67 1.3E-71 574.5 37.4 351 268-643 31-435 (482)
10 PLN02419 methylmalonate-semial 100.0 4.5E-67 9.7E-72 580.0 36.0 350 268-643 134-540 (604)
11 PLN02174 aldehyde dehydrogenas 100.0 3.9E-66 8.5E-71 563.7 36.9 338 290-643 9-396 (484)
12 PLN02315 aldehyde dehydrogenas 100.0 1.3E-65 2.7E-70 566.4 35.3 354 268-642 39-446 (508)
13 TIGR03374 ABALDH 1-pyrroline d 100.0 1.7E-65 3.6E-70 562.9 35.9 352 268-643 21-426 (472)
14 cd07130 ALDH_F7_AASADH NAD+-de 100.0 5.7E-65 1.2E-69 560.4 36.7 352 268-640 17-420 (474)
15 PLN02766 coniferyl-aldehyde de 100.0 6.2E-65 1.3E-69 561.8 36.1 351 268-643 41-448 (501)
16 PRK09406 gabD1 succinic semial 100.0 1.3E-64 2.9E-69 554.1 36.8 352 269-643 7-411 (457)
17 PRK13968 putative succinate se 100.0 1.6E-64 3.6E-69 554.1 36.3 349 268-643 12-414 (462)
18 cd07086 ALDH_F7_AASADH-like NA 100.0 1.9E-64 4.1E-69 557.3 36.7 355 268-643 18-429 (478)
19 PLN02278 succinic semialdehyde 100.0 2.5E-64 5.4E-69 557.1 37.0 351 268-643 45-449 (498)
20 cd07113 ALDH_PADH_NahF Escheri 100.0 2.6E-64 5.5E-69 556.2 36.4 354 268-643 20-430 (477)
21 PLN02466 aldehyde dehydrogenas 100.0 1.9E-64 4E-69 560.1 34.6 350 269-643 79-485 (538)
22 TIGR01780 SSADH succinate-semi 100.0 3.4E-64 7.4E-69 551.3 35.5 350 269-643 3-407 (448)
23 PRK13252 betaine aldehyde dehy 100.0 5.8E-64 1.3E-68 554.8 36.6 351 268-643 27-434 (488)
24 cd07148 ALDH_RL0313 Uncharacte 100.0 7E-64 1.5E-68 549.5 36.7 355 269-643 5-409 (455)
25 TIGR03216 OH_muco_semi_DH 2-hy 100.0 8.6E-64 1.9E-68 552.5 36.4 354 268-643 19-434 (481)
26 cd07559 ALDH_ACDHII_AcoD-like 100.0 9E-64 2E-68 551.3 36.5 351 268-643 21-433 (480)
27 cd07117 ALDH_StaphAldA1 Unchar 100.0 1E-63 2.2E-68 549.8 36.7 351 268-643 21-428 (475)
28 cd07107 ALDH_PhdK-like Nocardi 100.0 1.3E-63 2.8E-68 548.3 37.2 349 269-643 3-409 (456)
29 cd07142 ALDH_F2BC Arabidosis a 100.0 8E-64 1.7E-68 552.1 35.3 351 268-643 24-431 (476)
30 cd07121 ALDH_EutE Ethanolamine 100.0 6.1E-64 1.3E-68 542.5 33.3 330 291-643 4-381 (429)
31 cd07140 ALDH_F1L_FTFDH 10-form 100.0 1.1E-63 2.5E-68 549.7 35.7 354 268-643 26-439 (486)
32 cd07081 ALDH_F20_ACDH_EutE-lik 100.0 1.5E-63 3.3E-68 539.2 34.1 332 293-643 1-383 (439)
33 cd07126 ALDH_F12_P5CDH Delta(1 100.0 4.1E-63 8.9E-68 541.4 37.8 352 268-643 17-437 (489)
34 cd07116 ALDH_ACDHII-AcoD Ralst 100.0 3.8E-63 8.2E-68 547.1 37.9 350 268-643 21-432 (479)
35 cd07085 ALDH_F6_MMSDH Methylma 100.0 2.5E-63 5.4E-68 548.8 36.1 351 268-643 21-428 (478)
36 cd07151 ALDH_HBenzADH NADP+-de 100.0 3.3E-63 7.2E-68 546.0 36.9 351 268-643 15-417 (465)
37 cd07106 ALDH_AldA-AAD23400 Str 100.0 3.7E-63 8.1E-68 543.6 36.9 348 269-643 3-401 (446)
38 PRK09457 astD succinylglutamic 100.0 3.6E-63 7.9E-68 547.4 37.0 350 268-643 20-424 (487)
39 PLN02467 betaine aldehyde dehy 100.0 2.7E-63 5.9E-68 548.4 35.2 353 268-643 28-442 (503)
40 PTZ00381 aldehyde dehydrogenas 100.0 3.6E-63 7.8E-68 545.0 35.7 339 290-643 6-390 (493)
41 TIGR02299 HpaE 5-carboxymethyl 100.0 4.1E-63 9E-68 548.4 36.3 349 268-643 21-431 (488)
42 cd07090 ALDH_F9_TMBADH NAD+-de 100.0 4.1E-63 9E-68 544.8 35.8 349 269-643 3-409 (457)
43 cd07152 ALDH_BenzADH NAD-depen 100.0 6.9E-63 1.5E-67 541.0 37.4 344 274-643 2-396 (443)
44 cd07097 ALDH_KGSADH-YcbD Bacil 100.0 5.5E-63 1.2E-67 545.4 36.6 351 268-643 19-426 (473)
45 PRK13473 gamma-aminobutyraldeh 100.0 5.4E-63 1.2E-67 546.1 35.8 352 268-643 22-427 (475)
46 PRK15398 aldehyde dehydrogenas 100.0 6.2E-63 1.3E-67 538.8 35.5 334 290-643 35-411 (465)
47 PLN00412 NADP-dependent glycer 100.0 7.8E-63 1.7E-67 545.0 36.6 355 268-643 36-440 (496)
48 cd07110 ALDH_F10_BADH Arabidop 100.0 1E-62 2.2E-67 541.5 37.2 350 269-643 3-411 (456)
49 TIGR01804 BADH glycine betaine 100.0 6E-63 1.3E-67 544.7 35.2 351 268-643 18-426 (467)
50 cd07145 ALDH_LactADH_F420-Bios 100.0 9.2E-63 2E-67 541.9 36.3 352 269-643 5-410 (456)
51 cd07109 ALDH_AAS00426 Uncharac 100.0 1.2E-62 2.5E-67 540.8 36.3 349 269-643 3-408 (454)
52 cd07101 ALDH_SSADH2_GabD2 Myco 100.0 1.3E-62 2.8E-67 540.1 36.7 350 269-643 2-406 (454)
53 cd07143 ALDH_AldA_AN0554 Asper 100.0 1.1E-62 2.3E-67 542.5 35.9 350 269-643 28-434 (481)
54 PLN02203 aldehyde dehydrogenas 100.0 2.1E-62 4.6E-67 536.4 37.3 339 290-643 5-395 (484)
55 TIGR03240 arg_catab_astD succi 100.0 1.6E-62 3.6E-67 542.3 36.5 350 268-643 18-422 (484)
56 cd07115 ALDH_HMSADH_HapE Pseud 100.0 1.5E-62 3.3E-67 539.7 35.9 350 269-643 3-406 (453)
57 cd07144 ALDH_ALD2-YMR170C Sacc 100.0 1.9E-62 4.2E-67 542.6 36.9 350 269-643 29-437 (484)
58 cd07147 ALDH_F21_RNP123 Aldehy 100.0 2.1E-62 4.6E-67 538.8 36.6 353 268-643 4-406 (452)
59 cd07138 ALDH_CddD_SSP0762 Rhod 100.0 2E-62 4.4E-67 540.3 36.4 348 268-643 19-422 (466)
60 cd07083 ALDH_P5CDH ALDH subfam 100.0 3.1E-62 6.7E-67 541.7 38.0 352 268-643 37-450 (500)
61 cd07150 ALDH_VaniDH_like Pseud 100.0 2.3E-62 4.9E-67 538.7 36.5 350 269-643 5-405 (451)
62 cd07124 ALDH_PutA-P5CDH-RocA D 100.0 3E-62 6.6E-67 543.3 37.8 378 239-643 14-462 (512)
63 cd07141 ALDH_F1AB_F2_RALDH1 NA 100.0 1.9E-62 4.1E-67 541.9 35.5 350 269-643 28-435 (481)
64 PRK03137 1-pyrroline-5-carboxy 100.0 3.3E-62 7.3E-67 542.7 37.4 351 267-643 54-464 (514)
65 TIGR01237 D1pyr5carbox2 delta- 100.0 3.3E-62 7.1E-67 542.4 37.2 351 268-643 51-461 (511)
66 cd07118 ALDH_SNDH Gluconobacte 100.0 2E-62 4.4E-67 537.8 34.5 349 270-643 4-409 (454)
67 cd07089 ALDH_CddD-AldA-like Rh 100.0 3.8E-62 8.2E-67 536.4 36.1 353 269-643 3-414 (459)
68 cd07125 ALDH_PutA-P5CDH Delta( 100.0 5.5E-62 1.2E-66 541.5 37.5 376 243-643 19-458 (518)
69 cd07108 ALDH_MGR_2402 Magnetos 100.0 3.8E-62 8.3E-67 537.2 35.7 350 269-643 3-411 (457)
70 cd07098 ALDH_F15-22 Aldehyde d 100.0 6.1E-62 1.3E-66 536.7 37.1 356 270-643 3-416 (465)
71 cd07094 ALDH_F21_LactADH-like 100.0 8.7E-62 1.9E-66 534.1 37.7 352 269-643 5-407 (453)
72 cd07120 ALDH_PsfA-ACA09737 Pse 100.0 3.6E-62 7.9E-67 534.6 34.2 349 269-643 3-410 (455)
73 cd07123 ALDH_F4-17_P5CDH Delta 100.0 8.8E-62 1.9E-66 539.3 37.4 351 267-642 50-467 (522)
74 cd07088 ALDH_LactADH-AldA Esch 100.0 7.1E-62 1.5E-66 536.9 36.3 351 268-643 18-423 (468)
75 cd07119 ALDH_BADH-GbsA Bacillu 100.0 4.5E-62 9.8E-67 539.7 34.6 350 268-643 18-427 (482)
76 cd07136 ALDH_YwdH-P39616 Bacil 100.0 5.4E-62 1.2E-66 529.7 34.5 332 295-643 2-379 (449)
77 cd07091 ALDH_F1-2_Ald2-like AL 100.0 4.7E-62 1E-66 538.8 34.4 351 268-643 24-431 (476)
78 TIGR03250 PhnAcAld_DH putative 100.0 8.7E-62 1.9E-66 534.5 35.7 349 269-643 23-423 (472)
79 PRK09407 gabD2 succinic semial 100.0 1.1E-61 2.3E-66 539.4 36.4 349 270-643 39-442 (524)
80 cd07131 ALDH_AldH-CAJ73105 Unc 100.0 1.3E-61 2.8E-66 535.9 36.9 350 269-643 20-428 (478)
81 TIGR01236 D1pyr5carbox1 delta- 100.0 8.2E-62 1.8E-66 539.0 35.1 350 268-642 51-468 (533)
82 cd07095 ALDH_SGSD_AstD N-succi 100.0 1E-61 2.2E-66 528.1 34.5 332 292-643 1-386 (431)
83 cd07100 ALDH_SSADH1_GabD1 Myco 100.0 1.4E-61 3.1E-66 527.8 35.0 330 293-643 1-384 (429)
84 cd07099 ALDH_DDALDH Methylomon 100.0 2.3E-61 5E-66 531.0 36.1 350 270-643 3-406 (453)
85 cd07102 ALDH_EDX86601 Uncharac 100.0 2.6E-61 5.6E-66 530.5 36.3 350 270-643 3-407 (452)
86 TIGR02288 PaaN_2 phenylacetic 100.0 2.6E-61 5.7E-66 530.5 35.9 352 268-641 70-493 (551)
87 cd07135 ALDH_F14-YMR110C Sacch 100.0 3.4E-61 7.4E-66 523.7 35.7 339 290-643 4-389 (436)
88 PRK09847 gamma-glutamyl-gamma- 100.0 3.1E-61 6.7E-66 532.0 35.9 351 268-643 40-446 (494)
89 cd07139 ALDH_AldA-Rv0768 Mycob 100.0 2.6E-61 5.6E-66 532.6 35.1 351 268-643 19-427 (471)
90 cd07092 ALDH_ABALDH-YdcW Esche 100.0 3.6E-61 7.8E-66 529.0 36.1 351 269-643 3-405 (450)
91 cd07111 ALDH_F16 Aldehyde dehy 100.0 3.2E-61 7E-66 529.5 35.0 342 268-643 42-435 (480)
92 cd07137 ALDH_F3FHI Plant aldeh 100.0 5.3E-61 1.2E-65 521.6 35.4 330 295-643 3-385 (432)
93 TIGR01722 MMSDH methylmalonic 100.0 6.6E-61 1.4E-65 529.0 36.2 350 268-643 21-427 (477)
94 cd07105 ALDH_SaliADH Salicylal 100.0 7.4E-61 1.6E-65 523.0 35.5 333 292-643 1-386 (432)
95 cd07112 ALDH_GABALDH-PuuC Esch 100.0 6.5E-61 1.4E-65 527.0 35.0 350 269-643 8-417 (462)
96 TIGR01238 D1pyr5carbox3 delta- 100.0 6E-61 1.3E-65 528.9 34.8 364 243-643 24-455 (500)
97 cd07122 ALDH_F20_ACDH Coenzyme 100.0 4.8E-61 1E-65 518.6 33.2 332 293-643 1-381 (436)
98 cd07146 ALDH_PhpJ Streptomyces 100.0 1E-60 2.2E-65 523.6 36.2 349 269-643 5-404 (451)
99 PF00171 Aldedh: Aldehyde dehy 100.0 2.8E-61 6.1E-66 531.0 31.0 349 269-643 13-418 (462)
100 cd07133 ALDH_CALDH_CalB Conife 100.0 1.3E-60 2.9E-65 519.7 35.7 333 295-643 2-387 (434)
101 cd07114 ALDH_DhaS Uncharacteri 100.0 9E-61 1.9E-65 526.3 34.6 350 269-643 3-412 (457)
102 cd07132 ALDH_F3AB Aldehyde deh 100.0 1.5E-60 3.3E-65 520.1 35.6 333 295-643 2-379 (443)
103 TIGR02278 PaaN-DH phenylacetic 100.0 1E-60 2.3E-65 540.9 35.3 347 268-641 20-436 (663)
104 TIGR02518 EutH_ACDH acetaldehy 100.0 2.4E-60 5.2E-65 521.4 37.0 334 290-643 7-390 (488)
105 cd07128 ALDH_MaoC-N N-terminal 100.0 1.7E-60 3.7E-65 524.9 33.8 347 268-642 20-445 (513)
106 cd07149 ALDH_y4uC Uncharacteri 100.0 7E-60 1.5E-64 519.8 36.9 352 269-643 5-407 (453)
107 cd07093 ALDH_F8_HMSADH Human a 100.0 6.9E-60 1.5E-64 519.6 36.4 350 269-643 3-410 (455)
108 PRK11904 bifunctional proline 100.0 7.6E-60 1.6E-64 551.6 38.1 380 240-643 536-977 (1038)
109 cd07103 ALDH_F5_SSADH_GabD Mit 100.0 8E-60 1.7E-64 518.8 35.3 350 269-643 3-406 (451)
110 cd07104 ALDH_BenzADH-like ALDH 100.0 1.3E-59 2.8E-64 514.4 36.0 333 292-643 1-385 (431)
111 KOG2456 Aldehyde dehydrogenase 100.0 7.9E-60 1.7E-64 472.5 30.7 336 292-643 3-384 (477)
112 cd07082 ALDH_F11_NP-GAPDH NADP 100.0 1.8E-59 3.8E-64 518.2 36.5 353 268-643 21-426 (473)
113 PRK11903 aldehyde dehydrogenas 100.0 1E-59 2.2E-64 520.3 34.5 348 268-641 24-447 (521)
114 PRK11563 bifunctional aldehyde 100.0 1.5E-59 3.2E-64 535.3 33.7 348 268-642 24-449 (675)
115 PRK11809 putA trifunctional tr 100.0 3.9E-59 8.5E-64 549.4 33.9 341 267-643 663-1066(1318)
116 cd07129 ALDH_KGSADH Alpha-Keto 100.0 7.8E-59 1.7E-63 508.6 34.0 336 293-641 1-399 (454)
117 cd07077 ALDH-like NAD(P)+-depe 100.0 2.1E-58 4.6E-63 497.9 36.7 337 298-643 1-347 (397)
118 cd07087 ALDH_F3-13-14_CALDH-li 100.0 1.2E-58 2.7E-63 503.9 35.1 334 295-643 2-379 (426)
119 cd07134 ALDH_AlkH-like Pseudom 100.0 1.7E-58 3.7E-63 503.0 35.3 332 295-643 2-386 (433)
120 cd07084 ALDH_KGSADH-like ALDH 100.0 2.1E-58 4.5E-63 503.1 33.7 332 294-643 2-393 (442)
121 cd07127 ALDH_PAD-PaaZ Phenylac 100.0 1.1E-57 2.3E-62 503.2 36.5 343 291-641 84-493 (549)
122 PRK10090 aldehyde dehydrogenas 100.0 3.3E-58 7.1E-63 495.4 30.2 306 319-643 1-361 (409)
123 PRK11905 bifunctional proline 100.0 2.2E-57 4.7E-62 536.5 36.4 340 268-643 572-969 (1208)
124 PRK13805 bifunctional acetalde 100.0 2.8E-56 6E-61 522.1 36.4 336 290-643 11-395 (862)
125 KOG2454 Betaine aldehyde dehyd 100.0 3.4E-56 7.4E-61 441.2 21.3 359 268-643 69-484 (583)
126 cd07078 ALDH NAD(P)+ dependent 100.0 5.9E-52 1.3E-56 454.6 35.0 330 295-643 2-386 (432)
127 cd06534 ALDH-SF NAD(P)+-depend 100.0 1.2E-50 2.7E-55 434.6 32.2 310 299-643 2-321 (367)
128 COG0014 ProA Gamma-glutamyl ph 100.0 6.8E-50 1.5E-54 404.8 31.2 352 291-643 3-361 (417)
129 COG4230 Delta 1-pyrroline-5-ca 100.0 5.6E-50 1.2E-54 413.8 23.7 333 274-643 139-529 (769)
130 COG0263 ProB Glutamate 5-kinas 100.0 1.1E-46 2.3E-51 377.1 23.9 255 11-283 3-260 (369)
131 KOG2452 Formyltetrahydrofolate 100.0 5.7E-47 1.2E-51 383.3 20.0 318 290-643 458-834 (881)
132 KOG2453 Aldehyde dehydrogenase 100.0 9.8E-46 2.1E-50 360.7 12.5 334 290-638 54-439 (507)
133 KOG1154 Gamma-glutamyl kinase 100.0 2.3E-44 4.9E-49 337.1 20.7 273 8-284 3-277 (285)
134 cd04256 AAK_P5CS_ProBA AAK_P5C 100.0 1.4E-43 3E-48 361.5 25.6 271 9-280 3-283 (284)
135 PRK12314 gamma-glutamyl kinase 100.0 1E-42 2.2E-47 353.2 24.9 260 8-283 3-265 (266)
136 PRK13402 gamma-glutamyl kinase 100.0 5E-42 1.1E-46 360.1 24.0 253 12-283 3-258 (368)
137 PTZ00489 glutamate 5-kinase; P 100.0 5.5E-41 1.2E-45 337.6 24.7 253 8-283 2-260 (264)
138 KOG2455 Delta-1-pyrroline-5-ca 100.0 7.9E-41 1.7E-45 337.4 21.7 335 290-642 95-495 (561)
139 PRK05429 gamma-glutamyl kinase 100.0 1.6E-40 3.5E-45 352.2 24.4 258 8-283 2-262 (372)
140 cd04242 AAK_G5K_ProB AAK_G5K_P 100.0 3.7E-40 8E-45 333.3 24.4 248 16-281 1-251 (251)
141 TIGR01027 proB glutamate 5-kin 100.0 3.4E-40 7.3E-45 348.3 24.3 252 15-283 1-254 (363)
142 KOG4165 Gamma-glutamyl phospha 100.0 3.7E-39 7.9E-44 314.8 29.4 351 293-643 2-355 (433)
143 COG0548 ArgB Acetylglutamate k 100.0 1.8E-35 3.9E-40 291.6 22.0 242 13-281 1-264 (265)
144 TIGR00746 arcC carbamate kinas 100.0 1.4E-33 3E-38 288.9 22.5 243 15-281 1-309 (310)
145 PRK12353 putative amino acid k 100.0 2.5E-33 5.5E-38 289.7 22.5 256 13-281 1-313 (314)
146 cd04241 AAK_FomA-like AAK_FomA 100.0 3.6E-33 7.7E-38 283.3 19.7 243 16-280 1-252 (252)
147 CHL00202 argB acetylglutamate 100.0 8.2E-32 1.8E-36 276.3 23.1 245 13-281 22-283 (284)
148 cd04237 AAK_NAGS-ABP AAK_NAGS- 100.0 9.5E-32 2.1E-36 275.0 21.9 242 14-280 18-280 (280)
149 PRK12352 putative carbamate ki 100.0 3.3E-31 7.2E-36 271.7 24.1 257 14-282 2-315 (316)
150 PLN02512 acetylglutamate kinas 100.0 3.4E-31 7.3E-36 274.5 23.8 245 13-281 46-308 (309)
151 PRK12686 carbamate kinase; Rev 100.0 4.8E-31 1E-35 268.4 21.8 256 13-281 1-311 (312)
152 PRK00942 acetylglutamate kinas 100.0 6.5E-31 1.4E-35 270.8 20.4 240 14-282 23-282 (283)
153 COG1608 Predicted archaeal kin 100.0 1.2E-30 2.7E-35 248.4 20.3 244 17-281 3-251 (252)
154 PRK14058 acetylglutamate/acety 100.0 9.8E-31 2.1E-35 266.7 21.2 236 16-282 1-267 (268)
155 PRK12454 carbamate kinase-like 100.0 2.9E-30 6.2E-35 262.0 23.8 251 14-281 2-312 (313)
156 cd04250 AAK_NAGK-C AAK_NAGK-C: 100.0 1.2E-30 2.7E-35 268.0 21.3 241 14-280 14-279 (279)
157 cd07080 ALDH_Acyl-CoA-Red_LuxC 100.0 3.8E-30 8.2E-35 278.9 25.0 313 292-641 25-386 (422)
158 cd02115 AAK Amino Acid Kinases 100.0 8.9E-31 1.9E-35 265.6 15.5 240 18-280 1-248 (248)
159 PRK05279 N-acetylglutamate syn 100.0 5E-30 1.1E-34 280.6 21.9 244 14-283 25-292 (441)
160 cd04235 AAK_CK AAK_CK: Carbama 100.0 1.8E-29 3.8E-34 256.9 21.5 252 16-281 1-308 (308)
161 TIGR01890 N-Ac-Glu-synth amino 100.0 4.1E-29 8.9E-34 272.1 25.0 240 13-283 16-280 (429)
162 cd04246 AAK_AK-DapG-like AAK_A 100.0 1.4E-29 3E-34 254.7 19.7 221 16-264 1-232 (239)
163 cd04239 AAK_UMPK-like AAK_UMPK 100.0 3.6E-29 7.9E-34 249.9 21.6 228 16-281 1-229 (229)
164 PRK00358 pyrH uridylate kinase 100.0 6.1E-29 1.3E-33 248.9 23.1 229 15-281 1-231 (231)
165 cd04236 AAK_NAGS-Urea AAK_NAGS 100.0 1.1E-29 2.4E-34 255.3 17.8 222 14-280 35-271 (271)
166 cd04261 AAK_AKii-LysC-BS AAK_A 100.0 2.1E-29 4.6E-34 253.2 19.4 221 16-264 1-232 (239)
167 cd04234 AAK_AK AAK_AK: Amino A 100.0 2.5E-29 5.4E-34 250.5 19.3 214 16-280 1-226 (227)
168 cd04249 AAK_NAGK-NC AAK_NAGK-N 100.0 3.3E-29 7.2E-34 253.9 19.3 236 17-280 1-252 (252)
169 PRK14558 pyrH uridylate kinase 100.0 1.1E-28 2.5E-33 246.5 21.4 222 15-282 1-230 (231)
170 cd04252 AAK_NAGK-fArgBP AAK_NA 100.0 6.2E-29 1.3E-33 250.4 19.6 228 18-280 2-248 (248)
171 cd04260 AAK_AKi-DapG-BS AAK_AK 100.0 9.3E-29 2E-33 248.9 19.4 221 16-264 1-237 (244)
172 cd04238 AAK_NAGK-like AAK_NAGK 100.0 7.8E-29 1.7E-33 251.8 18.5 236 17-280 1-256 (256)
173 cd04251 AAK_NAGK-UC AAK_NAGK-U 100.0 4.6E-29 1E-33 252.7 16.0 226 17-280 1-257 (257)
174 TIGR00761 argB acetylglutamate 100.0 2.9E-28 6.2E-33 244.0 18.8 215 16-258 1-231 (231)
175 PRK12354 carbamate kinase; Rev 100.0 4.4E-28 9.5E-33 245.5 20.1 248 15-283 1-301 (307)
176 TIGR02075 pyrH_bact uridylate 100.0 1.3E-27 2.8E-32 238.9 22.9 229 14-281 1-233 (233)
177 cd04255 AAK_UMPK-MosAB AAK_UMP 100.0 1E-27 2.2E-32 241.8 22.1 229 15-281 31-262 (262)
178 PF00696 AA_kinase: Amino acid 100.0 2.4E-28 5.3E-33 246.8 16.9 229 15-260 1-242 (242)
179 PRK08841 aspartate kinase; Val 100.0 8.9E-28 1.9E-32 256.2 22.1 230 15-282 2-242 (392)
180 cd04254 AAK_UMPK-PyrH-Ec UMP k 100.0 2.2E-27 4.9E-32 237.0 20.7 229 15-281 1-231 (231)
181 PRK14557 pyrH uridylate kinase 100.0 7.8E-27 1.7E-31 233.3 23.2 234 11-283 1-239 (247)
182 PLN02825 amino-acid N-acetyltr 100.0 9.6E-27 2.1E-31 253.0 24.8 248 13-283 16-365 (515)
183 PRK09411 carbamate kinase; Rev 100.0 5.6E-27 1.2E-31 235.2 20.6 242 15-281 2-296 (297)
184 PRK14556 pyrH uridylate kinase 99.9 2.2E-26 4.8E-31 227.1 23.0 236 8-282 9-248 (249)
185 COG0549 ArcC Carbamate kinase 99.9 3.3E-26 7.2E-31 222.4 23.3 255 15-281 1-311 (312)
186 TIGR00656 asp_kin_monofn aspar 99.9 4.9E-27 1.1E-31 254.4 19.4 230 16-283 2-244 (401)
187 PRK04531 acetylglutamate kinas 99.9 2E-26 4.3E-31 244.8 21.4 211 14-283 36-250 (398)
188 TIGR02076 pyrH_arch uridylate 99.9 2.6E-26 5.6E-31 228.2 20.8 219 17-281 1-221 (221)
189 PRK08210 aspartate kinase I; R 99.9 1.3E-26 2.9E-31 250.8 20.1 232 14-283 1-248 (403)
190 PRK06635 aspartate kinase; Rev 99.9 1.6E-26 3.5E-31 250.6 20.1 232 14-283 1-243 (404)
191 cd04253 AAK_UMPK-PyrH-Pf AAK_U 99.9 4.7E-26 1E-30 226.1 20.9 219 16-281 1-221 (221)
192 COG0527 LysC Aspartokinases [A 99.9 1.1E-25 2.4E-30 241.9 20.3 239 15-283 2-290 (447)
193 COG0528 PyrH Uridylate kinase 99.9 4.8E-25 1E-29 210.8 21.3 230 13-281 4-237 (238)
194 PRK07431 aspartate kinase; Pro 99.9 1.8E-25 4E-30 252.8 20.4 234 15-283 2-245 (587)
195 cd04244 AAK_AK-LysC-like AAK_A 99.9 9.1E-24 2E-28 217.5 19.2 234 16-280 1-297 (298)
196 TIGR00657 asp_kinases aspartat 99.9 5.6E-24 1.2E-28 232.8 18.5 238 16-283 2-284 (441)
197 PRK08373 aspartate kinase; Val 99.9 2.3E-23 5E-28 216.4 19.7 235 13-283 2-280 (341)
198 cd04259 AAK_AK-DapDC AAK_AK-Da 99.9 6.1E-23 1.3E-27 210.4 18.8 235 16-280 1-294 (295)
199 cd04245 AAK_AKiii-YclM-BS AAK_ 99.9 1.4E-22 3.1E-27 206.5 20.0 231 17-280 2-287 (288)
200 cd04257 AAK_AK-HSDH AAK_AK-HSD 99.9 1.7E-22 3.6E-27 207.4 19.2 233 17-280 2-293 (294)
201 TIGR02078 AspKin_pair Pyrococc 99.9 6E-23 1.3E-27 212.2 15.8 232 16-283 1-271 (327)
202 PRK06291 aspartate kinase; Pro 99.9 1.8E-22 3.8E-27 221.6 20.2 238 16-283 2-304 (465)
203 cd04243 AAK_AK-HSDH-like AAK_A 99.9 2.6E-22 5.7E-27 205.8 19.6 232 17-280 2-292 (293)
204 PRK09084 aspartate kinase III; 99.9 3.6E-22 7.8E-27 217.5 18.0 234 16-283 1-290 (448)
205 PRK05925 aspartate kinase; Pro 99.9 2E-21 4.3E-26 209.8 18.8 235 15-283 2-281 (440)
206 cd04258 AAK_AKiii-LysC-EC AAK_ 99.9 3.4E-21 7.4E-26 196.8 18.7 231 16-280 1-291 (292)
207 PRK09034 aspartate kinase; Rev 99.9 8.5E-21 1.8E-25 207.3 19.6 234 17-283 2-290 (454)
208 cd04247 AAK_AK-Hom3 AAK_AK-Hom 99.9 9.5E-21 2.1E-25 194.3 18.2 235 16-282 2-305 (306)
209 PLN02551 aspartokinase 99.9 1.1E-20 2.4E-25 207.6 19.9 238 14-283 51-349 (521)
210 PRK09466 metL bifunctional asp 99.8 4.7E-20 1E-24 212.4 16.9 236 14-282 10-300 (810)
211 PRK08961 bifunctional aspartat 99.8 1.5E-19 3.2E-24 212.3 17.8 239 14-282 7-305 (861)
212 PRK09436 thrA bifunctional asp 99.8 3.2E-19 6.9E-24 207.2 18.5 236 17-283 2-298 (819)
213 cd04240 AAK_UC AAK_UC: Unchara 99.8 2.4E-18 5.1E-23 167.9 16.2 202 18-280 1-203 (203)
214 PRK09181 aspartate kinase; Val 99.7 1.3E-16 2.9E-21 173.8 14.2 162 93-283 140-312 (475)
215 cd04248 AAK_AK-Ectoine AAK_AK- 99.7 1.1E-15 2.5E-20 154.6 17.2 158 94-280 135-303 (304)
216 KOG0456 Aspartate kinase [Amin 99.6 9.9E-15 2.1E-19 147.0 12.8 240 16-283 80-376 (559)
217 KOG2436 Acetylglutamate kinase 99.4 1.7E-12 3.6E-17 136.3 11.2 245 14-283 95-360 (520)
218 COG2054 Uncharacterized archae 99.3 2.6E-11 5.6E-16 110.8 15.1 95 173-282 114-210 (212)
219 PF05893 LuxC: Acyl-CoA reduct 99.3 5.1E-10 1.1E-14 120.3 27.6 239 396-639 81-362 (399)
220 KOG2449 Methylmalonate semiald 98.5 5.1E-08 1.1E-12 85.2 1.3 58 586-643 76-133 (157)
221 PF07368 DUF1487: Protein of u 97.9 6.8E-05 1.5E-09 72.3 10.6 123 514-642 7-160 (215)
222 PRK11905 bifunctional proline 97.9 3.1E-05 6.7E-10 93.9 10.0 103 391-510 1067-1175(1208)
223 PF00815 Histidinol_dh: Histid 92.9 10 0.00022 41.0 18.9 234 362-633 68-321 (412)
224 cd06572 Histidinol_dh Histidin 91.3 24 0.00052 37.9 21.0 235 363-633 56-308 (390)
225 COG0141 HisD Histidinol dehydr 90.2 30 0.00065 37.3 19.0 233 363-633 80-331 (425)
226 PLN02926 histidinol dehydrogen 88.5 41 0.00089 36.6 19.9 233 363-633 83-338 (431)
227 PRK00877 hisD bifunctional his 87.0 50 0.0011 35.9 21.8 235 363-633 84-335 (425)
228 PRK13770 histidinol dehydrogen 86.4 53 0.0011 35.6 21.9 231 363-633 76-325 (416)
229 TIGR00069 hisD histidinol dehy 86.2 45 0.00097 35.8 17.1 233 363-633 52-304 (393)
230 PRK12447 histidinol dehydrogen 83.0 76 0.0016 34.5 20.8 234 363-632 77-329 (426)
231 PRK11809 putA trifunctional tr 82.5 3.1 6.8E-05 51.6 7.5 93 391-499 1176-1268(1318)
232 PRK13769 histidinol dehydrogen 81.1 81 0.0018 33.6 22.4 210 363-619 58-275 (368)
233 COG1778 Low specificity phosph 74.1 4.8 0.0001 37.2 4.3 57 193-268 10-66 (170)
234 TIGR02726 phenyl_P_delta pheny 64.9 36 0.00077 32.2 8.3 59 193-272 9-69 (169)
235 PF03437 BtpA: BtpA family; I 54.4 29 0.00064 35.1 6.0 119 174-301 123-253 (254)
236 TIGR01689 EcbF-BcbF capsule bi 50.3 30 0.00066 30.9 4.9 49 14-63 1-50 (126)
237 PF10686 DUF2493: Protein of u 48.1 53 0.0011 26.2 5.4 44 16-68 4-48 (71)
238 cd01390 HMGB-UBF_HMG-box HMGB- 36.9 79 0.0017 24.0 4.9 35 298-332 30-64 (66)
239 PF13376 OmdA: Bacteriocin-pro 36.1 52 0.0011 25.4 3.6 35 290-324 7-41 (63)
240 PTZ00174 phosphomannomutase; P 34.1 80 0.0017 31.6 5.7 44 13-61 4-47 (247)
241 PRK15126 thiamin pyrimidine py 34.0 76 0.0016 32.1 5.6 43 14-61 2-44 (272)
242 PRK05265 pyridoxine 5'-phospha 33.3 2.9E+02 0.0064 27.6 9.1 88 137-271 115-202 (239)
243 PRK10513 sugar phosphate phosp 32.9 76 0.0017 32.0 5.4 45 13-62 2-46 (270)
244 PF03740 PdxJ: Pyridoxal phosp 32.1 5.3E+02 0.012 25.8 10.7 102 136-282 112-214 (239)
245 PRK01158 phosphoglycolate phos 31.4 89 0.0019 30.5 5.4 44 14-62 3-46 (230)
246 PF00505 HMG_box: HMG (high mo 31.4 99 0.0021 23.7 4.6 35 299-333 31-65 (69)
247 PRK10976 putative hydrolase; P 31.3 88 0.0019 31.5 5.5 45 14-63 2-46 (266)
248 PF09011 HMG_box_2: HMG-box do 31.2 1.2E+02 0.0025 24.0 5.0 32 298-329 34-65 (73)
249 COG1623 Predicted nucleic-acid 31.1 6.1E+02 0.013 26.2 11.0 62 139-205 26-90 (349)
250 PF06945 DUF1289: Protein of u 31.0 58 0.0013 24.1 2.9 22 305-326 28-49 (51)
251 COG0434 SgcQ Predicted TIM-bar 29.7 1.2E+02 0.0026 30.2 5.6 62 241-302 192-259 (263)
252 PRK10530 pyridoxal phosphate ( 29.2 1E+02 0.0022 31.0 5.6 43 14-61 3-45 (272)
253 smart00398 HMG high mobility g 28.6 1.5E+02 0.0032 22.6 5.2 35 299-333 32-66 (70)
254 cd01388 SOX-TCF_HMG-box SOX-TC 26.5 1.5E+02 0.0032 23.3 4.9 34 298-331 31-64 (72)
255 TIGR01684 viral_ppase viral ph 25.9 1.7E+02 0.0038 30.3 6.3 49 13-64 125-174 (301)
256 PHA03398 viral phosphatase sup 25.7 1.8E+02 0.004 30.1 6.5 48 13-63 127-175 (303)
257 PLN02645 phosphoglycolate phos 25.1 1.1E+02 0.0025 31.8 5.1 52 6-63 20-71 (311)
258 COG0686 Ald Alanine dehydrogen 24.7 4.5E+02 0.0097 27.6 8.9 95 138-267 101-204 (371)
259 TIGR01670 YrbI-phosphatas 3-de 23.8 2.1E+02 0.0045 26.2 6.1 59 193-272 3-63 (154)
260 PF11305 DUF3107: Protein of u 23.8 76 0.0016 25.5 2.6 27 174-200 20-47 (74)
261 PLN02887 hydrolase family prot 23.2 1.5E+02 0.0033 33.9 5.9 49 8-61 302-350 (580)
262 PRK09875 putative hydrolase; P 22.9 7.4E+02 0.016 25.6 10.5 71 110-198 171-244 (292)
263 COG0561 Cof Predicted hydrolas 22.7 1.5E+02 0.0032 29.8 5.3 46 13-63 2-47 (264)
264 cd00084 HMG-box High Mobility 22.2 2.3E+02 0.005 21.1 5.2 33 298-330 30-62 (66)
265 COG1979 Uncharacterized oxidor 21.4 2.1E+02 0.0044 30.1 5.8 61 6-67 21-100 (384)
266 PF03295 Pox_TAA1: Poxvirus tr 21.0 1.1E+02 0.0024 23.4 2.8 30 590-619 8-37 (63)
267 PLN02151 trehalose-phosphatase 20.7 2.2E+02 0.0048 30.4 6.1 69 179-272 86-154 (354)
268 TIGR01487 SPP-like sucrose-pho 20.3 2.1E+02 0.0045 27.7 5.6 44 15-63 2-45 (215)
No 1
>PLN02418 delta-1-pyrroline-5-carboxylate synthase
Probab=100.00 E-value=2.1e-110 Score=950.51 Aligned_cols=635 Identities=83% Similarity=1.217 Sum_probs=545.9
Q ss_pred chhhHhhhcccceEEEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcCCCcccc
Q 006484 4 TDSSRAFVKDVKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADL 83 (643)
Q Consensus 4 ~~~~~~~~~~~~~iVIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~~~~~~l 83 (643)
-+.+|+.+.++|++||||||+++++.++.++.+.+..++++|+.+++.|+++|||.||+..+|+.+++..+.+..-+.++
T Consensus 5 ~~~~~~~~~~~~~iViK~G~ssl~~~~~~~~~~~i~~l~~~i~~l~~~g~~vvlVsSga~~~g~~~l~~~~~~~~~~~~~ 84 (718)
T PLN02418 5 EDRSRAFLRDVKRVVIKVGTAVVTRDDGRLALGRLGALCEQIKELNSDGYEVILVSSGAVGVGRQRLRYRRLVNSSFADL 84 (718)
T ss_pred ccchhhHHhhCCEEEEEeCCCeecCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEecchHHHHHHHHhhhhhhhcccccC
Confidence 34456667788999999999999998888999999999999999999999999999999999998776544322111112
Q ss_pred cCcccchhHHHHHHhchHHHHHHHHHHhccCCCCcceeEecccccCcchhhchHHHHHHHHHhCCCeeEecCCCceeccC
Q 006484 84 QKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRK 163 (643)
Q Consensus 84 ~~~~~~l~~~~~~a~G~~~~~~~~~~~l~~~g~~~~~~~~t~~~~~~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~ 163 (643)
......+.+|+++++||..++.+|+..|..+|++++|+++|+++|.++..+.+..+.|+.||+.|+|||+++||.+.+..
T Consensus 85 ~~~~~~~~~qa~aa~Gq~~l~~~~~~~f~~~g~~~~qillT~~~~~~~~~~~~~~~~l~~ll~~g~iPVv~~nd~v~~~~ 164 (718)
T PLN02418 85 QKPQMELDGKACAAVGQSELMALYDTLFSQLDVTASQLLVTDSDFRDPDFRKQLSETVESLLDLRVIPIFNENDAVSTRR 164 (718)
T ss_pred CCCcchHHHHHHHHhhHHHHHHHHHHHHHHcCCeEEEEEecHhHhcchhHhHhHHHHHHHHHHCCCEEEEcCCCCccccc
Confidence 11112345679999999999999999999999999999999999988777778889999999999999999999988643
Q ss_pred CCCCCCCceeecchhHHHHHHhhcCCCEEEEeccCCccccCCCCCCCccceeeeecccchhHHhcCCCCCccCCCchHHH
Q 006484 164 APYEDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKV 243 (643)
Q Consensus 164 ~~~~~~~~~~~~~D~~A~~lA~~L~Ad~li~lTdVdGVy~~~P~~p~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~Kl 243 (643)
.++.+....++|+|++|+.+|.+++||+|+|+|||||||++||++|++++|++++..+....+..++.+.+++|||.+|+
T Consensus 165 ~~~~~~~~~~~d~D~~A~~lA~~l~Ad~li~~TdVdGvy~~~p~~~~a~~i~~i~~~~~~~~i~~~~~s~~~tGGM~~Kl 244 (718)
T PLN02418 165 APYEDSSGIFWDNDSLAALLALELKADLLILLSDVEGLYTGPPSDPSSKLIHTYIKEKHQDEITFGEKSRVGRGGMTAKV 244 (718)
T ss_pred cccccccCeecCcHHHHHHHHHHcCCCEEEEeecCCeeecCCCCCCCceEcceecccchhhhhhcccccccCCCCcHHHH
Confidence 21111122468999999999999999999999999999999998899999999987665544555555678999999999
Q ss_pred HHHHHHHHcCCcEEEEeCCCcchHHHHHcCCceeeEEecCccccccH--HhHHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Q 006484 244 NAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRDAHLWVKQ--VGAREMAVAARESSRRLQALQSQDRRKILLD 321 (643)
Q Consensus 244 ~aa~~a~~~gv~v~I~~g~~~~~l~~~~~g~~~GT~i~~~~~~~~~~--~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~ 321 (643)
+++..+.++|++++|+||+.++.+.++++|+..||+|.++.|.|... +.+++++++|++||+.|+++|..+|.++|++
T Consensus 245 ~Aa~~a~~~Gi~v~I~~g~~~~~l~~~l~g~~~GT~i~~~~~~~~~~~~~~~~~~~~aA~~A~~~W~~~~~~eR~~~L~~ 324 (718)
T PLN02418 245 KAAVNAASAGIPVVITSGYALDNIRKVLRGERVGTLFHQDAHLWAPSKEVGAREMAVAARESSRKLQALSSEERKKILLD 324 (718)
T ss_pred HHHHHHHHCCCcEEEeCCCCcchHHHHhcCCCCceEeccccchhhhccHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 99999999999999999999999999999988999999987776522 4699999999999999999999999999999
Q ss_pred HHHHHHhCHHHHHHHHHHHHHHHHHhchhhHHHHHhhcChhHHHHHHHHHHHHhcccccccccccccccCCCeeEEEEee
Q 006484 322 VADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSC 401 (643)
Q Consensus 322 ~a~~l~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 401 (643)
++++|++|.++|++++++|++.++++|++..+.+.+..+..++..++..++++++..++.|+..+....+.+...+++|+
T Consensus 325 ~a~~l~~~~~ela~~~~~d~~~~~E~G~~k~~~~~~~~~~~ev~~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~~~~r~ 404 (718)
T PLN02418 325 VADALEANEELIKAENELDVAAAQEAGYEKSLVSRLTLKPGKIASLAASIRQLADMEDPIGRVLKRTEVADGLVLEKTSC 404 (718)
T ss_pred HHHHHHHhHHHHHHHHHHhHHHHHHhCCchhHHHHHhccHHHHHHHHHHHHHHhcCccccCccccccccCCCceEEEEEE
Confidence 99999999999999998888777888855544444434456899999999999887666665543111123445678899
Q ss_pred eeeeEEEEcCCCchhHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccccCcCc----eEeecCcchHhHhhh
Q 006484 402 PLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKL----IGLVTSREEIPDLLK 477 (643)
Q Consensus 402 PlGvv~~I~p~~P~~~~~~~~~AlaaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~alP~g~----v~~v~~~~~~~~~l~ 477 (643)
|+|||++|+||||..++++++|||++||+||+||||+||+|+.+++++++++ ||+|+ +|+|+++.+++++|.
T Consensus 405 PlGVV~~I~PwnP~~~~~kiapALaaGNtVVlKPse~tp~s~~~l~~l~~eA----lP~gv~~~v~nvv~g~~~~g~~L~ 480 (718)
T PLN02418 405 PLGVLLIIFESRPDALVQIASLAIRSGNGLLLKGGKEAARSNAILHKVITDA----IPKTVGGKLIGLVTSRDEIPDLLK 480 (718)
T ss_pred eeeEEEEEeCCCcHHHHHHHHHHHHhCCEEEEeCCccchHHHHHHHHHHHHH----ccccCCcceEEEeCCcHHHHHHHh
Confidence 9999999999999766699999999999999999999999999999999874 77775 999997557788898
Q ss_pred CCCCccEEEeecCHHHHHHHHHhcCCCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCCccccceeEEEcCccCCch
Q 006484 478 LDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNG 557 (643)
Q Consensus 478 ~~~~v~~i~fTGs~~~g~~i~~~a~~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g~C~a~~rv~V~~~i~~~~ 557 (643)
.||+||+|+||||+..+++++..+.||+++|||||||+||++|||+|.|++.+++|+|.|+|+|+|++|+|||++|| |+
T Consensus 481 ~~~~v~~V~FTGSt~~i~~~aa~~~k~v~lELGGk~p~iV~~DADld~A~~~i~~~~~~nGQ~C~a~~RllVh~~i~-d~ 559 (718)
T PLN02418 481 LDDVIDLVIPRGSNKLVSQIKASTKIPVLGHADGICHVYVDKSADMDMAKRIVVDAKTDYPAACNAMETLLVHKDLV-QN 559 (718)
T ss_pred hCCCCCEEEEeCCHHHHHHHHHhcCCCEEEeCCCcceEEEeCCCCHHHHHHHHHHHhCCCCCccccCcEEEEecccc-cc
Confidence 99999999999999999998887789999999999999999999999999999999999955999999999999999 68
Q ss_pred -hHHHHHHHHHHcCCEEecCccccccccCCCCccccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEecCHHHHHH
Q 006484 558 -ALNELVVELQHEGVGLFGGPRASKLLQIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAET 636 (643)
Q Consensus 558 -f~~~l~~~~~~~~~~~~g~~~~~~~~pv~~~~~~~eE~FgPvl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~~~~ 636 (643)
.+..+++.+.+.|++++|++...+++.+++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.+
T Consensus 560 G~~~~~i~~a~~~Ga~l~Gg~~~~g~l~~~~~~i~~eE~FgPv~~i~~~~~~dEAI~~aN~s~yGLsa~V~T~d~~~a~~ 639 (718)
T PLN02418 560 GGLNDLLVALRSAGVTLYGGPRASKLLNIPEAQSFHHEYSSLACTVEIVDDVHAAIDHIHRHGSAHTDCIVTEDSEVAEI 639 (718)
T ss_pred ccHHHHHHHHHHCCCEEECCccccCeeCCCCchhhhCCcCCeeEEEEEECCHHHHHHHHhcCCCCCeeEEEcCCHHHHHH
Confidence 7788888889999988877543344434668999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCC
Q 006484 637 FLCQVDR 643 (643)
Q Consensus 637 ~~~~l~~ 643 (643)
|++++++
T Consensus 640 ~a~~l~a 646 (718)
T PLN02418 640 FLRQVDS 646 (718)
T ss_pred HHHhCCe
Confidence 9999985
No 2
>TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase. This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region.
Probab=100.00 E-value=1.9e-109 Score=945.12 Aligned_cols=629 Identities=74% Similarity=1.079 Sum_probs=545.8
Q ss_pred hhcccceEEEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcCCCcccccCcccc
Q 006484 10 FVKDVKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNE 89 (643)
Q Consensus 10 ~~~~~~~iVIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~~~~~~l~~~~~~ 89 (643)
.++..+++|||+|||+|+++++.++.+.+.+++++|+.|++.|+++|||.||+.++|+..++++......+.++......
T Consensus 3 ~~~~~~~iViKiGss~lt~~~~~~~~~~l~~l~~~i~~l~~~g~~vilVsSGA~a~G~~~~~~~~~~~~~~~~~~~~~~~ 82 (715)
T TIGR01092 3 FLKDVKRIVVKVGTAVVTRGDGRLALGRLGSICEQLSELNSDGREVILVTSGAVAFGRQRLRHRILVNSSFADLQKPQPE 82 (715)
T ss_pred hhhcCCEEEEEeCcceeECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEccchHHhchHHhccchhccccccccCCCCch
Confidence 35567899999999999998778999999999999999999999999999999999998776543222222233333345
Q ss_pred hhHHHHHHhchHHHHHHHHHHhccCCCCcceeEecccccCcchhhchHHHHHHHHHhCCCeeEecCCCceeccCCCCCCC
Q 006484 90 LDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDS 169 (643)
Q Consensus 90 l~~~~~~a~G~~~~~~~~~~~l~~~g~~~~~~~~t~~~~~~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~~ 169 (643)
+.+++++++||..++.+|+..|..+++++.|+++|++||.++.++.+..+.|+.||+.|+|||+++||+|++.+.++++.
T Consensus 83 ~~~qa~aa~gq~~L~~~y~~~f~~~~i~~aQ~Llt~~d~~~~~~~~~~~~~l~~lL~~g~iPVin~nD~V~~~~~~~~~~ 162 (715)
T TIGR01092 83 LDGKACAAVGQSGLMALYETMFTQLDITAAQILVTDLDFRDEQFRRQLNETVHELLRMNVVPVVNENDAVSTRAAPYSDS 162 (715)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCeeEEEEechhhcccHHHHHHHHHHHHHHHHCCCEEEEcCCCcccccccccccc
Confidence 67889999999999999999999999999999999999998888888899999999999999999999999865433222
Q ss_pred CceeecchhHHHHHHhhcCCCEEEEeccCCccccCCCCCCCccceeeeecccchhHHhcCCCCCccCCCchHHHHHHHHH
Q 006484 170 SGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCA 249 (643)
Q Consensus 170 ~~~~~~~D~~A~~lA~~L~Ad~li~lTdVdGVy~~~P~~p~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a 249 (643)
.+.++|+|++|+.+|.+|+||+|+|+|||||||++||++|++++|++++..+....+..+..+.+++|||.+|++++..+
T Consensus 163 ~g~~~d~D~lAa~lA~~l~Ad~LiilTDVdGVy~~dP~~~~a~~I~~i~~~~~~~~i~~~~~~~~~tGGM~~Kl~aa~~a 242 (715)
T TIGR01092 163 QGIFWDNDSLAALLALELKADLLILLSDVEGLYDGPPSDDDSKLIDTFYKEKHQGEITFGTKSRLGRGGMTAKVKAAVWA 242 (715)
T ss_pred cceecchHHHHHHHHHHcCCCEEEEEeCCCeeeCCCCCCCCCeEeeeecccchhhhhccCcccccCCCCchHHHHHHHHH
Confidence 23479999999999999999999999999999999998899999999997766545555555668999999999999999
Q ss_pred HHcCCcEEEEeCCCcchHHHHHcCCceeeEEecCccccccH--HhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 006484 250 ACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRDAHLWVKQ--VGAREMAVAARESSRRLQALQSQDRRKILLDVADALE 327 (643)
Q Consensus 250 ~~~gv~v~I~~g~~~~~l~~~~~g~~~GT~i~~~~~~~~~~--~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~ 327 (643)
.++|++++|+||+.++.|.+++.|+..||+|.+..|-|... +.+++.+++|++||+.|+++|.++|.++|++++++|+
T Consensus 243 ~~~gi~v~I~~g~~~~~l~~~l~g~~~GT~~~~~~~~~~~~~~~~~~~~~~~A~~A~~~w~~~~~~~R~~~L~~la~~l~ 322 (715)
T TIGR01092 243 AYGGTPVIIASGTAPKNITKVVEGKKVGTLFHEDAHLWPTVEQTGERDMAVAARESSRMLQALSSEQRKEILHDIADALE 322 (715)
T ss_pred HHCCCeEEEeCCCCcchHHHHhcCCCCceEecccchhhhhhhHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999988999998875443211 3588999999999999999999999999999999999
Q ss_pred hCHHHHHHHHHHHHHHHHHhchhhHHHHHhhcChhHHHHHHHHHHHHhcccccccccccccccCCCeeEEEEeeeeeeEE
Q 006484 328 ANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLL 407 (643)
Q Consensus 328 ~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGvv~ 407 (643)
+|.++|++++.+++..+++.+..+....++..+..+++.+++.++++++..++.|...+......+...+++|+|+|||+
T Consensus 323 ~~~eei~~e~gkdl~~a~~~~~~~~~~~el~~~~~ei~~~~~~l~~~a~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~ 402 (715)
T TIGR01092 323 DNEDEILAENKKDVAAAQGAGYAASLVARLSMSPSKISSLAISLRQLAAMEDPIGRVLKRTRIADNLILEKTSVPIGVLL 402 (715)
T ss_pred HHHHHHHHHHhhhHHHHHhcCcchhHHHHHhCCHHHHHHHHHHHHHHhcCCCcccccccccccCCCceeEEEEeeceEEE
Confidence 99999999999999877665666777888889999999999999999876555565442111122444677899999999
Q ss_pred EEcCCCchhHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccccCcC----ceEeecCcchHhHhhhCCCCcc
Q 006484 408 IVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEK----LIGLVTSREEIPDLLKLDDVID 483 (643)
Q Consensus 408 ~I~p~~P~~~~~~~~~AlaaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~alP~g----~v~~v~~~~~~~~~l~~~~~v~ 483 (643)
+|+||||..++++++|||+|||+||+||||.||.|+.+++++++++ ||+| ++|+|+++++++++|..||+||
T Consensus 403 ~I~PwNP~~~~~~~~~ALaaGN~vvlKpse~tp~t~~~l~~l~~~a----lp~g~~~~~~~~v~~~~~~~~~l~~~~~vd 478 (715)
T TIGR01092 403 IVFESRPDALVQIASLAIRSGNGLLLKGGKEAARSNAILHKVITEA----IPIHVGKKLIGLVTSREEIPDLLKLDDVID 478 (715)
T ss_pred EEeCCChHHHHHHHHHHHHhCCEEEEcCcccchHHHHHHHHHHHHH----cCCCCCCcEEEEeCChHHHHHHHhcCCCcc
Confidence 9999999766789999999999999999999999999999999985 5655 7899986567789999999999
Q ss_pred EEEeecCHHHHHHHHHhcCCCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCCccccceeEEEcCccCCch-hHHHH
Q 006484 484 LVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNG-ALNEL 562 (643)
Q Consensus 484 ~i~fTGs~~~g~~i~~~a~~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g~C~a~~rv~V~~~i~~~~-f~~~l 562 (643)
+|+||||+.+|+.|+++|++|+++|||||||+||++|||++.|++.+++++|.|+|+|+|++|+|||+++| |+ +++++
T Consensus 479 ~I~fTGS~~vG~~i~~~A~~pv~lElgGk~p~iV~~dADl~~A~~~i~~~~~~~GQ~C~a~~rvlV~~~i~-d~~~~~~~ 557 (715)
T TIGR01092 479 LVIPRGSNKLVSQIKKSTKIPVLGHADGICHVYVDKSASVDMAKRIVRDAKCDYPAACNAMETLLVHKDLL-RNGLLDDL 557 (715)
T ss_pred EEEEcCCHHHHHHHHHhCCCCEEEEcCCcceEEECCCCCHHHHHHHHHHHhCCCCCccccCcEEEEehhhc-cchhHHHH
Confidence 99999999999999988889999999999999999999999999888888887755999999999999999 66 77888
Q ss_pred HHHHHHcCCEEecCccccccccC--CCCccccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEecCHHHHHHHHHh
Q 006484 563 VVELQHEGVGLFGGPRASKLLQI--PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQ 640 (643)
Q Consensus 563 ~~~~~~~~~~~~g~~~~~~~~pv--~~~~~~~eE~FgPvl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~~~~~~~~ 640 (643)
++.+.+.|++++|++....++++ ++|++|+||+||||++|++|+|+||||+++|+++|||++||||+|.+++.+|+++
T Consensus 558 v~~~~~~Ga~l~Gg~~~~~~~~~~~~~~~i~~eE~FGPvl~v~~~~~~deAi~~~N~~~~gLa~~ift~d~~~a~~~~~~ 637 (715)
T TIGR01092 558 IDMLRTEGVTIHGGPRFAAYLTFNISETKSFRTEYSSLACTVEIVDDVYDAIDHIHKHGSAHTDCIVTEDENVAEFFLQH 637 (715)
T ss_pred HHHHHHCCCEEECCcchhheeccCCCCchhhhccccCceEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHh
Confidence 88888888888877543334442 4689999999999999999999999999999999999999999999999999999
Q ss_pred cCC
Q 006484 641 VDR 643 (643)
Q Consensus 641 l~~ 643 (643)
+++
T Consensus 638 i~s 640 (715)
T TIGR01092 638 VDS 640 (715)
T ss_pred CCe
Confidence 875
No 3
>PRK00197 proA gamma-glutamyl phosphate reductase; Provisional
Probab=100.00 E-value=3e-73 Score=614.78 Aligned_cols=352 Identities=39% Similarity=0.667 Sum_probs=319.6
Q ss_pred HhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhhHHHHHhhcChhHHHHHHHH
Q 006484 291 VGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKS 370 (643)
Q Consensus 291 ~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~ 370 (643)
+++++++++|++||+.|+++|..+|.++|++++++|++|.++|++++++|+++++++|++++..+++..+..+++.+++.
T Consensus 4 ~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~g~~~~~g~~~~~~~~~~~~~~ev~~~~~~ 83 (417)
T PRK00197 4 EYLEELGRRAKAASRKLAQLSTAQKNRALLAIADALEANAAEILAANAKDLAAARANGLSAAMLDRLLLTEARIEGIAEG 83 (417)
T ss_pred hHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHHHHhcCCHHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999988888887777777777899999999
Q ss_pred HHHHhcccccccccccccccCCCeeEEEEeeeeeeEEEEcCCCchhHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHH
Q 006484 371 IRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVI 450 (643)
Q Consensus 371 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~~P~~~~~~~~~AlaaGN~vi~Kps~~tp~t~~~~~~l~ 450 (643)
+++++.++++.|...+....+.+...+++|+|+|||++|+||||++++++++|||++||+||+||||.||.|+.++++++
T Consensus 84 ~~~~a~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~p~~~~~~~~~~ALaaGN~vVlKPs~~tp~t~~~l~~l~ 163 (417)
T PRK00197 84 LRQVAALPDPVGEVLDGWTLPNGLRIGRVRVPLGVIGVIYESRPNVTVDAAALCLKSGNAVILRGGSEAIHSNRALVAVI 163 (417)
T ss_pred HHHHhhcCCCccccccceecCCCceEEEEecCceEEEEEcCCCchHHHHHHHHHHHhCCeEEEecChhhhHHHHHHHHHH
Confidence 99998776655544332111234456789999999999999988888899999999999999999999999999999999
Q ss_pred HHhcccc-cCcCceEeecC-c-chHhHhhhCCCCccEEEeecCHHHHHHHHHhcCCCEEEecCccceEEEcCCCCHHHHH
Q 006484 451 TSAIPDT-VGEKLIGLVTS-R-EEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAK 527 (643)
Q Consensus 451 ~~a~~~a-lP~g~v~~v~~-~-~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a~~p~~lelGG~~p~iV~~dAdl~~A~ 527 (643)
.+++.++ +|+|++|+|++ + ++++++|..||+||+|+||||+++|++|++.+.+|+++|||||||+||++|||+|+|+
T Consensus 164 ~~~l~~aGlP~gv~~~v~g~~~~~~~~~l~~~~~v~~V~fTGS~~~g~~i~~~a~~~~~lELGGk~p~IV~~dAdl~~Aa 243 (417)
T PRK00197 164 QEALEEAGLPADAVQLVETTDRAAVGELLKLDGYVDVIIPRGGAGLIRRVVENATVPVIEHGDGICHIYVDESADLDKAL 243 (417)
T ss_pred HHHHHHcCcChhhEEEecCCChHHHHHHhccCCCccEEEecCCHHHHHHHHHhcCCCEEeecCCcceEEEeCCCCHHHHH
Confidence 9888889 99999999994 4 4578999889999999999999999999988899999999999999999999999999
Q ss_pred HHHHhhcCCCCCccccceeEEEcCccCCchhHHHHHHHHHHcCCEEecCcccccccc-C--CCCccccccccCceEEEEE
Q 006484 528 NIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLQ-I--PETRLFHHEYNSMVCTVEI 604 (643)
Q Consensus 528 ~~iv~~~~~n~g~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~~~~g~~~~~~~~p-v--~~~~~~~eE~FgPvl~v~~ 604 (643)
+.+++|+|.|+|+|+|++|+|||++|| |+|+++|+++++++++++.|++...+++| | ++|++++||+||||++|++
T Consensus 244 ~~iv~~~~~n~G~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~~~~~~~~~~~~~PTi~~~~~~i~~eE~FGPVl~v~~ 322 (417)
T PRK00197 244 KIVLNAKTQRPSVCNALETLLVHEAIA-EEFLPKLAEALAEAGVELRGDEAALALLPDVVPATEEDWDTEYLDLILAVKV 322 (417)
T ss_pred HHHHHhccCCCcccccceEEEEEHHHh-HHHHHHHHHHHHHCCCeEecCHHHHHhhcccccCCcchhhhhhhCceEEEEE
Confidence 999999999999999999999999999 79999999999999988777654334668 4 5689999999999999999
Q ss_pred eCCHHHHHHHHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 605 VDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 605 ~~~~deAi~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
|+|+||||+++|+++|||++||||+|.+++++|++++++
T Consensus 323 ~~~~deAi~~aN~~~~GL~a~V~t~d~~~~~~~~~~l~~ 361 (417)
T PRK00197 323 VDSLDEAIAHINRYGSGHTEAIVTEDYAAAERFLNEVDS 361 (417)
T ss_pred eCCHHHHHHHHHhcCCCCceEEEeCCHHHHHHHHHhCCe
Confidence 999999999999999999999999999999999999874
No 4
>cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19. Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1).
Probab=100.00 E-value=1e-72 Score=608.70 Aligned_cols=348 Identities=42% Similarity=0.706 Sum_probs=313.9
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhhHHHHHhhcChhHHHHHHHHHHHH
Q 006484 295 EMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRIL 374 (643)
Q Consensus 295 ~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~~ 374 (643)
+.+++|++||+.|+++|.++|.++|++++++|++|+++|+++++.|+++++++|++++..+++..+..+++.+++.++++
T Consensus 2 ~~~~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~gk~~e~G~~~a~~~~l~~~~~ev~~~~~~~~~~ 81 (406)
T cd07079 2 ELAKRAKAASRALATLSTEQKNAALLAIADALEANRDEILEANAKDLAAAREAGLSEALLDRLLLTPERIEAMAEGLRQV 81 (406)
T ss_pred hHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhchHHHHHHhhhhHHHHHHcCCCHHHHhHhcCCHHHHHHHHHHHHHH
Confidence 56789999999999999999999999999999999999999999999999888887777777788888999999999999
Q ss_pred hcccccccccccccccCCCeeEEEEeeeeeeEEEEcCCCchhHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhc
Q 006484 375 ADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAI 454 (643)
Q Consensus 375 ~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~~P~~~~~~~~~AlaaGN~vi~Kps~~tp~t~~~~~~l~~~a~ 454 (643)
+..++..|...+....+.+...+++|+|+|||++|+||||++++++++|||++||+||+||||.||+|+..+++++++++
T Consensus 82 a~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~~p~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~~l 161 (406)
T cd07079 82 AALPDPVGEVLRGWTLPNGLQIEKVRVPLGVIGIIYESRPNVTVDAAALCLKSGNAVILRGGSEALHSNRALVEIIQEAL 161 (406)
T ss_pred HhcCCCCcccccceeccCccceeEEecceEEEEEecCCCcchHHHHHHHHHHhCCEEEEeCCchhhhHHHHHHHHHHHHH
Confidence 86655445433221112234567889999999999999888888999999999999999999999999999999999888
Q ss_pred ccc-cCcCceEeecC-c-chHhHhhhCCCCccEEEeecCHHHHHHHHHhcCCCEEEecCccceEEEcCCCCHHHHHHHHH
Q 006484 455 PDT-VGEKLIGLVTS-R-EEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVI 531 (643)
Q Consensus 455 ~~a-lP~g~v~~v~~-~-~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a~~p~~lelGG~~p~iV~~dAdl~~A~~~iv 531 (643)
.++ +|+|++|+|++ + ++++++|.+||+||+|+||||+++|++|++++.+|+++|||||||+||++|||+|.|++.++
T Consensus 162 ~~aG~P~gvv~~v~g~~~~~~~~~l~~~~~v~~i~fTGS~~~G~~i~~~a~~pv~lELGGk~p~IV~~dADl~~Aa~~i~ 241 (406)
T cd07079 162 EEAGLPEDAVQLIPDTDREAVQELLKLDDYIDLIIPRGGAGLIRFVVENATIPVIKHGDGNCHVYVDESADLEMAVRIVV 241 (406)
T ss_pred HHcCCCcccEEEecCCChHHHHHHHcCCCCccEEEeCCCHHHHHHHHHhcCCCEEeecCCcceEEEeCCCCHHHHHHHHH
Confidence 788 99999999995 4 36788899999999999999999999999888999999999999999999999999999999
Q ss_pred hhcCCCCCccccceeEEEcCccCCchhHHHHHHHHHHcCCEEecCccccccc-c-C-CCCccccccccCceEEEEEeCCH
Q 006484 532 DAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLL-Q-I-PETRLFHHEYNSMVCTVEIVDDV 608 (643)
Q Consensus 532 ~~~~~n~g~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~~~~g~~~~~~~~-p-v-~~~~~~~eE~FgPvl~v~~~~~~ 608 (643)
+|+|.|+|+|+|++|+|||++|| |+|+++|+++++++|+++.|++....++ | + ++|++++||+||||++|++|+|+
T Consensus 242 ~~~f~n~G~C~a~~rv~V~~si~-d~f~~~l~~~~~~~ga~~~~g~~~~~~~~ptv~~d~~i~~eE~FGPVl~v~~~~~~ 320 (406)
T cd07079 242 NAKTQRPSVCNALETLLVHRDIA-EEFLPKLAEALREAGVELRGDEETLAILPGAKPATEEDWGTEYLDLILAVKVVDSL 320 (406)
T ss_pred HcccCCCcccccceeEEEeHHHH-HHHHHHHHHHHHHCCCEEecCHHHHHhcccccCCCcchhhhhhhCceeEEEEeCCH
Confidence 99999999999999999999999 7999999999999999887775433355 4 5 56899999999999999999999
Q ss_pred HHHHHHHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 609 RAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 609 deAi~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
||||+++|+++|||++||||+|.++++++++++++
T Consensus 321 deAi~~aN~~~~GLsa~ift~d~~~a~~~~~~~~~ 355 (406)
T cd07079 321 DEAIAHINRYGSGHTEAIVTENYETAERFLREVDS 355 (406)
T ss_pred HHHHHHHHHhCCccccEeeeCCHHHHHHHHHhCCe
Confidence 99999999999999999999999999999999875
No 5
>KOG2451 consensus Aldehyde dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=2.9e-71 Score=549.48 Aligned_cols=352 Identities=15% Similarity=0.179 Sum_probs=303.3
Q ss_pred HHHHHcCCceeeEEecCccccccHHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Q 006484 267 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 346 (643)
Q Consensus 267 l~~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~ 346 (643)
+.+|.+|+.+|.+.... -++.++|+.+|.+||.+|++++..+|.++|+++.++|.+|.++|++.++.|.++ +
T Consensus 43 V~nPa~geii~~V~~~~------V~e~~kAI~aA~EaF~s~~~~takeRs~lLrkwy~Li~en~ddLa~iiTlE~GK--p 114 (503)
T KOG2451|consen 43 VDNPANGEIIGKVADMT------VEEAEKAIDAAYEAFKSYRNLTAKERSALLRKWYELIMENKDDLATIITLENGK--P 114 (503)
T ss_pred ccCCCccchhhcccCCc------HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhchHHHHHHHhhhcCC--c
Confidence 35677788777766555 678999999999999999999999999999999999999999999998866543 2
Q ss_pred hchhhHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHHHH
Q 006484 347 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 423 (643)
Q Consensus 347 ~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~~ 423 (643)
+.+ ...|+.+.+..++||++.+++ .|..+++. ....+..+.++|+||+++|+|| ||. +..+|.++
T Consensus 115 --L~e--------A~gEv~y~a~f~eWyAeEA~RvyGdii~s~--~~~rr~i~ikQPvGV~alItPWNFP~AMItRK~gA 182 (503)
T KOG2451|consen 115 --LGE--------AKGEVAYSAAFFEWYAEEARRVYGDIIPSL--NPNRRLIVIKQPVGVVALITPWNFPAAMITRKAGA 182 (503)
T ss_pred --hhh--------ccceeehhHHHHHHHHHHhhhhhccccCCC--CCCceEEEEeccceeEEEecCcCChHHHHHhHHHH
Confidence 223 245788888899999876654 57766532 2345677889999999999999 585 56699999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecC----cchHhHhhhCCCCccEEEeecCHHHHHHHH
Q 006484 424 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS----REEIPDLLKLDDVIDLVIPRGSNKLVSQIK 498 (643)
Q Consensus 424 AlaaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~----~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~ 498 (643)
||++|||||+|||++||+|++.++++..+ | +|+|++|+++. ..+.+..|..+|.|++|+|||||.+||..+
T Consensus 183 ALAaGCTvVvkPs~~TPlsaLala~lA~~----AGiP~Gv~NVit~~~~~a~eig~~lctsp~VrkisFTGST~VGKiL~ 258 (503)
T KOG2451|consen 183 ALAAGCTVVVKPSEDTPLSALALAKLAEE----AGIPAGVLNVITADASNAAEIGKELCTSPDVRKISFTGSTNVGKILM 258 (503)
T ss_pred HHhcCceEEEccCCCCchHHHHHHHHHHH----cCCCCcceEEEecCCCChHHHHHHhhcCCceeeEEeeccchHHHHHH
Confidence 99999999999999999999999999987 7 99999999982 346788888899999999999999999999
Q ss_pred HhcC---CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCCE--
Q 006484 499 ESTK---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVG-- 572 (643)
Q Consensus 499 ~~a~---~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~~-- 572 (643)
.++. |++.+|||||.|+||++|||||+|++.....+|.|+| +|.+.+|+|||++|| |+|+.+|.++++++.+.
T Consensus 259 ~qsastvKkvslELGGNAPfIVFddadld~Av~g~mA~KFr~~GQtCVcaNR~yVh~~iy-D~Fv~~l~e~vkkl~vGdG 337 (503)
T KOG2451|consen 259 AQSASTVKKVSLELGGNAPFIVFDDADLDQAVEGAMACKFRNSGQTCVCANRVYVHDSIY-DKFVSKLAEAVKKLKVGDG 337 (503)
T ss_pred HhhhhhhhheehhhcCCCceEEecCcCHHHHHHHHHHhhhccCCceeEecceeEEehhhH-HHHHHHHHHHHHheeccCC
Confidence 8773 9999999999999999999999999999999999998 999999999999999 79999999999987321
Q ss_pred ---------------------------------EecCcccc----ccc-c-----CC-CCccccccccCceEEEEEeCCH
Q 006484 573 ---------------------------------LFGGPRAS----KLL-Q-----IP-ETRLFHHEYNSMVCTVEIVDDV 608 (643)
Q Consensus 573 ---------------------------------~~g~~~~~----~~~-p-----v~-~~~~~~eE~FgPvl~v~~~~~~ 608 (643)
++||.+.. .+| | |+ +|-+..||+|||+.+|++|+|+
T Consensus 338 ~~~~tt~GpLIne~av~Kve~~v~DAvsKga~ii~GGk~~~~lg~~fyePTvl~~V~~~m~~s~eEtFGPla~v~kFdte 417 (503)
T KOG2451|consen 338 LDPGTTQGPLINEKAVEKVEKHVEDAVSKGAKIILGGKERSELGPTFYEPTVLSNVTQNMLVSSEETFGPLASVFKFDTE 417 (503)
T ss_pred CCCCCccCCccCHHHHHHHHHHHHHHHhcCCeEEeCCeEccccCCccccceEeecCCccceeeccccccccceeeeeCCH
Confidence 13443211 133 5 23 5788999999999999999999
Q ss_pred HHHHHHHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 609 RAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 609 deAi~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
||+|+++|+++.||++|+||+|..+..+++++|++
T Consensus 418 eEvi~~ANdt~vGLAgYvfs~~~s~~~rVae~LEv 452 (503)
T KOG2451|consen 418 EEVIEWANDTRVGLAGYVFSNNLSRLFRVAEALEV 452 (503)
T ss_pred HHHHHHhccCccceeeEEeccCHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999874
No 6
>KOG2450 consensus Aldehyde dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=1.3e-71 Score=578.35 Aligned_cols=349 Identities=17% Similarity=0.209 Sum_probs=305.2
Q ss_pred HHcCCceeeEEecCccccccHHhHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Q 006484 270 VLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSR--RLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (643)
Q Consensus 270 ~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~ 347 (643)
+-+|+.++++...+ .++|++++++||+||+ .|++++..+|.++|+++|+++++++++|+...+.|-++ +
T Consensus 43 P~tg~~i~~v~~~~------~~dVd~aV~aAr~Af~~~~W~~~~~~~R~~~L~~~Adlie~~~~~lA~~E~~d~GK--p- 113 (501)
T KOG2450|consen 43 PATGEVIAKVAEAT------EEDVDEAVKAARSAFKLVDWAKRDAAERGRLLRKLADLIEQDADVLAALEVLDNGK--P- 113 (501)
T ss_pred CCCCCeEEEecccc------HHHHHHHHHHHHHhcCcCccccCCHHHHHHHHHHHHHHHHhhhHHHhhhcccccCC--c-
Confidence 44677778877777 8999999999999999 79999999999999999999999999999977655433 2
Q ss_pred chhhHHHHHhhcChhHHHHHHHHHHHHhcccccc-cccccccccCCCeeEEEEeeeeeeEEEEcCCC-ch-hHHHHHHHH
Q 006484 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFESR-PD-ALVQIASLA 424 (643)
Q Consensus 348 g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~~-P~-~~~~~~~~A 424 (643)
+.+++ ..++..+++.+++++.+++.. +..++. +.....|++++|+|||+.|.||| |. +..||++||
T Consensus 114 -~~~a~-------~~Dl~~~~~~~ry~ag~ad~~~~~~~~~---~~~~~~yt~~eP~GV~G~I~pWN~Pllm~awKlaPA 182 (501)
T KOG2450|consen 114 -YPEAL-------VSDLPPAIDCFRYYAGWADKIHGSTIPT---DGEFFAYTRREPIGVCGQIIPWNFPLLMQAWKLAPA 182 (501)
T ss_pred -chhhh-------hcCchhhhhHHHhhccchhhcccccCCC---CCceEEEecCCcceeeeEeccCchHHHHHHHhhhhH
Confidence 33332 146888999999999988654 554432 34567899999999999999996 95 567999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHHhcC
Q 006484 425 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK 502 (643)
Q Consensus 425 laaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a~ 502 (643)
|++||+||+||||+||+|++.+++++.+ + ||+||+|+|+| +.++++.|.+||+|++|+||||+.+|+.|+++++
T Consensus 183 La~GNtvV~Kpae~tplsal~~~~l~~e----aG~P~GVvNii~G~G~~aG~al~sH~dv~kiaFTGSt~~G~~I~~aaa 258 (501)
T KOG2450|consen 183 LAAGNTVVLKPAEQTPLTALYLASLCKE----AGFPPGVVNIVPGSGTTAGAALASHPDVDKVAFTGSTPVGKEIMEAAA 258 (501)
T ss_pred HhhCcEEEecCCCCCCchHHHHHHHhHH----hcCCcceEEEccCCCchHHHHHhhCCCCceEEecCCCcchhHHhhhhh
Confidence 9999999999999999999999999988 7 99999999996 7788999999999999999999999999998773
Q ss_pred ----CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHH-cCC-----
Q 006484 503 ----IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQH-EGV----- 571 (643)
Q Consensus 503 ----~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~-~~~----- 571 (643)
||++||||||+|.||++|||+|.|++.+.++.|+|.| .|++.+|+|||++|| |+|++++++++++ +++
T Consensus 259 ~~n~K~vtLElGGKsp~Ivf~Dadld~av~~~~~~iF~nqGq~C~a~sR~~Vqe~iy-defv~~~v~~a~~~~kvGdP~~ 337 (501)
T KOG2450|consen 259 ESNLKPVTLELGGKSPIIVFDDADLDLAVENAAFGIFFNQGQCCTAGSRVFVQESIY-DEFVEKFVAAAKKKLKVGDPFD 337 (501)
T ss_pred hcCCceeccccCCCCcceEecccchHHHHHHHHHHhhcccccccccCceeEEechHH-HHHHHHHHHHHhcccccCCCCC
Confidence 9999999999999999999999999999999999998 999999999999999 7999999999865 432
Q ss_pred -----------------------------EE-ecCccc--cccc--c-C-----CCCccccccccCceEEEEEeCCHHHH
Q 006484 572 -----------------------------GL-FGGPRA--SKLL--Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAA 611 (643)
Q Consensus 572 -----------------------------~~-~g~~~~--~~~~--p-v-----~~~~~~~eE~FgPvl~v~~~~~~deA 611 (643)
++ +|+.+. .++| | | ++|.+++||+||||++|++|++.||+
T Consensus 338 ~~~~qG~~i~~~q~ekI~~yi~~~k~eGa~l~~gG~~~g~~Gyfi~Ptv~~~v~~~m~i~~EEIFGPVv~v~~F~t~eE~ 417 (501)
T KOG2450|consen 338 EGTEQGPQISKTQYEKILGYIESGKKEGATLLCGGVRLGDKGYFIKPTVFTNVTDDMRIAKEEIFGPVVVVLKFKTEEEV 417 (501)
T ss_pred cccccccccCHHHHHHHHHHHHHHHhcCCEEEecCcccCCCceEECCeeccCCChhhhhhHhhccCceEEEEecCcHHHH
Confidence 12 344332 2343 5 2 35899999999999999999999999
Q ss_pred HHHHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 612 IDHIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 612 i~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
|++||++.|||+++|||+|.+++.++++++++
T Consensus 418 i~~AN~t~yGLAa~V~t~dl~~a~~va~~l~a 449 (501)
T KOG2450|consen 418 IERANNTTYGLAAGVFTKDLDKAHRVANALQA 449 (501)
T ss_pred HHHhcCCcccceeeEeccChHHHHHHHHHhcC
Confidence 99999999999999999999999999999875
No 7
>COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion]
Probab=100.00 E-value=3e-69 Score=587.93 Aligned_cols=349 Identities=22% Similarity=0.239 Sum_probs=297.0
Q ss_pred HHHHcCCceeeEEecCccccccHHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Q 006484 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (643)
Q Consensus 268 ~~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~ 347 (643)
.++.+|+.++++...+ .+++++|+++|+.||+.|+++|+.+|.++|++++++|++|.++|+++++.|.+++
T Consensus 19 ~nP~tg~~i~~~~~a~------~~dv~~Av~aA~~a~~~W~~~~~~eR~~iL~~~a~~l~~~~~ela~~~~~e~Gk~--- 89 (472)
T COG1012 19 INPATGEVIATVPAAT------AEDVDAAVAAARAAFEAWSRLSAEERAAILRRIADLLEARAEELAALITLETGKP--- 89 (472)
T ss_pred eCCCCCCEEeeecCCC------HHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCC---
Confidence 3467788889988877 7799999999999999999999999999999999999999999999988776432
Q ss_pred chhhHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHHHHH
Q 006484 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 424 (643)
Q Consensus 348 g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~~A 424 (643)
+.++. .++..+++.++++++..+. .+...+. +.+...+++|+|+|||++|+|| ||. +.+++++||
T Consensus 90 -i~ea~--------~ei~~~~~~~~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~k~apA 157 (472)
T COG1012 90 -ISEAR--------GEIARAADFIRYYAEEARRLEGETIPT---DKGSKALVRREPLGVVGAITPWNFPLALAAWKLAPA 157 (472)
T ss_pred -HHHHH--------HHHHHHHHHHHHHHHHHHHhcCCccCC---CCCcceEEEeecceEEEEECCCCCHHHHHHhhHHHH
Confidence 22322 2466777777777665532 2332221 1145678899999999999999 586 678999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHHhc-
Q 006484 425 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 501 (643)
Q Consensus 425 laaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a- 501 (643)
|++||+||+|||+.||+|+..+++++.+ + ||+|++|+|++ +.++++.|..||+|++|+||||+++|++|++.+
T Consensus 158 LaaGntVV~KPse~tp~sa~~l~~~~~~----aglP~Gv~nvv~g~~~~~g~~l~~~p~v~~i~FTGSt~~G~~i~~~Aa 233 (472)
T COG1012 158 LAAGNTVVLKPSEQTPLSALALAELAAE----AGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAAAA 233 (472)
T ss_pred HHcCCEEEEECcccCcHHHHHHHHHHHH----hCCCCCeEEEEeCCCchHHHHHhcCCCCCEEEEECChHHHHHHHHHHh
Confidence 9999999999999999999999999987 5 99999999995 555788888999999999999999999999887
Q ss_pred --CCCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHH-cCC------
Q 006484 502 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQH-EGV------ 571 (643)
Q Consensus 502 --~~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~-~~~------ 571 (643)
.||+++|||||||+||++|||+|.|++.+++|+|.|+| +|+|.+|+|||+++| |+|+++|.++ ++ +.+
T Consensus 234 ~~~k~~~lELGGk~p~IV~~dAdl~~Av~~~~~g~f~n~GQ~C~a~~R~~V~~~v~-d~f~~~l~~~-~~~l~~Gd~~d~ 311 (472)
T COG1012 234 ANLKPVTLELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVY-DEFVERLVAR-AASLKVGDPLDP 311 (472)
T ss_pred hcCCcEEEECCCCCCeEECCCCCHHHHHHHHHHHHHhCCCCCccCCeEEEEehhhH-HHHHHHHHHH-HhcCCCCCCCCC
Confidence 39999999999999999999999999999999999998 999999999999999 7999999999 66 211
Q ss_pred ----------------------------EE-ecCccccccc--c-C-----CCCccccccccCceEEEEEeCCHHHHHHH
Q 006484 572 ----------------------------GL-FGGPRASKLL--Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDH 614 (643)
Q Consensus 572 ----------------------------~~-~g~~~~~~~~--p-v-----~~~~~~~eE~FgPvl~v~~~~~~deAi~~ 614 (643)
.+ .|++...++| | | ++|.+++||+||||++|++|+|+||||++
T Consensus 312 ~t~~Gpli~~~~~~~v~~~i~~a~~~G~~~~~Gg~~~~g~~~~PTv~~~v~~~~~i~~eEiFGPVl~v~~~~~~dEAi~l 391 (472)
T COG1012 312 STDLGPLISEEQLDRVEGYIEDAVAEGARLLAGGKRPGGYFVEPTILEGVTPDMRIAREEIFGPVLPVIRFKDEEEAIEL 391 (472)
T ss_pred CCccCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCcCCCCeEECCEEEecCCCCChhhhccccCCceEEEEeCCHHHHHHH
Confidence 11 2222212233 5 2 46899999999999999999999999999
Q ss_pred HHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 615 IHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 615 aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
+|+++|||+++|||+|..++.++++++++
T Consensus 392 AN~t~yGL~a~v~t~d~~~~~~~~~~l~a 420 (472)
T COG1012 392 ANDTEYGLAAAIFTRDLARAFRVARRLEA 420 (472)
T ss_pred HhCCCCCceEEEEcCCHHHHHHHHhcCCe
Confidence 99999999999999999999999999875
No 8
>TIGR00407 proA gamma-glutamyl phosphate reductase. The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif.
Probab=100.00 E-value=5.5e-69 Score=574.58 Aligned_cols=343 Identities=41% Similarity=0.678 Sum_probs=301.1
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhhHHHHHhhcChhHHHHHHHHHHHHhcccc
Q 006484 300 ARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEE 379 (643)
Q Consensus 300 A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 379 (643)
|++||+.|+++|.++|.++|++++++|++|.++|++++++|+...+|+|++..+.+++..+..+++.+++.++++++..+
T Consensus 1 a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~a~~~E~Gk~~~~~~~l~~a~~ev~~~~~~~~~~a~~a~ 80 (398)
T TIGR00407 1 AKQAANILAQLSTAEKNDALSKIADGLEAQAPAILAANAKDIAVAKENGLADALLDRLLLTEGRLKGIADGVKDVIELAD 80 (398)
T ss_pred ChhHHHHHHhCCHHHHHHHHHHHHHHHHhChHHHHHHhHHHHHHHHHcCCCHHHHHHHcCCHHHHHHHHHHHHHHhcCCC
Confidence 57899999999999999999999999999999999998888888888888755555556667789999999999998776
Q ss_pred cccccccccccCCCeeEEEEeeeeeeEEEEcCCCchhHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-c
Q 006484 380 PIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-V 458 (643)
Q Consensus 380 ~~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~~P~~~~~~~~~AlaaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-l 458 (643)
+.|+..+.....++...+++|+|+|||++|+||||++++++++|||++||+||+||||.||.|+..+++++++++.++ |
T Consensus 81 ~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~pw~p~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~al~eaGl 160 (398)
T TIGR00407 81 PVGKVIDGRELDSGLTLERVRVPLGVLGVIYEARPNVTVDIASLCLKTGNAVILRGGKEAVRSNKALVEVIQDALAQTGL 160 (398)
T ss_pred CCcccccceecCCCceEEEEEeCcEEEEEEeCCCchHHHHHHHHHHHhCCeEEECCChhhHHHHHHHHHHHHHHHHHcCC
Confidence 666544321112355678899999999999999998888999999999999999999999999999999999888889 9
Q ss_pred CcCceEeecC-c-chHhHhhhCCCCccEEEeecCHHHHHHHHHhcCCCEEEecCccceEEEcCCCCHHHHHHHHHhhcCC
Q 006484 459 GEKLIGLVTS-R-EEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKID 536 (643)
Q Consensus 459 P~g~v~~v~~-~-~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a~~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~ 536 (643)
|+|++|+|++ + ++++++|..||+||+|+||||+.+|+.+++.+++|+++|||||||+||++|||+|+|++.+++|+|.
T Consensus 161 P~gvv~~v~g~~~~~~~~~l~~~~~v~~v~fTGs~~vg~~~~~~~~~~~~~e~gGk~p~iV~~dADl~~Aa~~iv~~~~~ 240 (398)
T TIGR00407 161 PVGAVQLIETPSRELVSELLDLDEYIDLLIPRGGNGLVRLIKQTSTIPVLGHGDGICHIYLDESADLIKAIKVIVNAKTQ 240 (398)
T ss_pred ChhHEEEecCCCHHHHHHHHhCCCCeeEEEecCCHHHHHHHHHhCCCCEEEecCCcceEEEeCCCCHHHHHHHHHhhhcC
Confidence 9999999995 4 4578999999999999999999999999988789999999999999999999999999999999998
Q ss_pred CCCccccceeEEEcCccCCchhHHHHHHHHHHcCCEEecCccccccc----c-C--CCCccccccccCceEEEEEeCCHH
Q 006484 537 YPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLL----Q-I--PETRLFHHEYNSMVCTVEIVDDVR 609 (643)
Q Consensus 537 n~g~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~~~~g~~~~~~~~----p-v--~~~~~~~eE~FgPvl~v~~~~~~d 609 (643)
|+|+|+|++|+|||++|| |+|+++|++++++.++.+........++ | + .++++++||+||||++|++|+|+|
T Consensus 241 ~GQ~C~a~~rv~V~~~v~-d~f~~~l~~~~~~~~~~~~~~~~i~~~v~~g~~tv~~~~~~i~~eE~FgPvl~v~~~~~~~ 319 (398)
T TIGR00407 241 RPSTCNAIETLLVNKAIA-REFLPVLENQLLEKGVTIHADAYALKLLELGPATEAIVCKTDFDKEFLSLDLSVKIVESLE 319 (398)
T ss_pred CCCcccccceEEEeHHHH-HHHHHHHHHHHHhcCCEEecCHHHHHHHhccCccccccccccccchhhCceeEEEEECCHH
Confidence 755999999999999999 7999999999998876542221111222 2 2 247899999999999999999999
Q ss_pred HHHHHHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 610 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 610 eAi~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
|||+++|+++|||++||||+|.+++++|++++++
T Consensus 320 eAi~~aN~~~~GL~a~I~t~d~~~a~~~a~~i~~ 353 (398)
T TIGR00407 320 AAIQHINQYGTQHSDAILTENKANAEQFQNGVDS 353 (398)
T ss_pred HHHHHHHHhCCCCceEEEeCCHHHHHHHHHhCCe
Confidence 9999999999999999999999999999999874
No 9
>PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional
Probab=100.00 E-value=6.2e-67 Score=574.52 Aligned_cols=351 Identities=16% Similarity=0.156 Sum_probs=297.6
Q ss_pred HHHHcCCceeeEEecCccccccHHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Q 006484 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (643)
Q Consensus 268 ~~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~ 347 (643)
.+|.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|++|+++|+++++.|++++.
T Consensus 31 ~nP~tg~~v~~~~~~~------~~~v~~av~~A~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-- 102 (482)
T PRK11241 31 TNPANGDKLGSVPKMG------ADETRAAIDAANRALPAWRALTAKERANILRRWFNLMMEHQDDLARLMTLEQGKPL-- 102 (482)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCH--
Confidence 3456788899988777 89999999999999999999999999999999999999999999998877665432
Q ss_pred chhhHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHHHHH
Q 006484 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 424 (643)
Q Consensus 348 g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~~A 424 (643)
.++ ..++..+++.+++++...+. .|...+.. ..+...+++|+|+|||++|+|| ||. +.+++++||
T Consensus 103 --~~a--------~~ev~~~~~~~~~~a~~~~~~~g~~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A 170 (482)
T PRK11241 103 --AEA--------KGEISYAASFIEWFAEEGKRIYGDTIPGH--QADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPA 170 (482)
T ss_pred --HHH--------HHHHHHHHHHHHHHHHHHHHhcCcccccC--CCCceEEEEEeeceEEEEECCCcChHHHHHHHHHHH
Confidence 122 23667777777776644332 23222211 1233457789999999999999 585 567999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHHhc-
Q 006484 425 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 501 (643)
Q Consensus 425 laaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a- 501 (643)
|++||+||+||||.||.++.++++++.+ + +|+|++|+|+| +.++++.|..||+||+|+||||+++|++|++.+
T Consensus 171 LaaGN~VVlKPs~~tp~~~~~l~~~~~~----aglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~FTGS~~~G~~i~~~aa 246 (482)
T PRK11241 171 LAAGCTMVLKPASQTPFSALALAELAIR----AGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQCA 246 (482)
T ss_pred HHhCCEEEEECCCCChHHHHHHHHHHHH----cCCCcccEEEEecCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHH
Confidence 9999999999999999999999999987 7 99999999995 556777777899999999999999999998876
Q ss_pred --CCCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC-------
Q 006484 502 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 571 (643)
Q Consensus 502 --~~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~------- 571 (643)
.+|+++|||||||+||++|||+|.|++.+++|+|.|+| +|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 247 ~~l~~~~lElGGknp~IV~~dADld~aa~~i~~~~f~~aGQ~C~a~~ri~V~~~i~-d~f~~~l~~~~~~l~~G~p~~~~ 325 (482)
T PRK11241 247 KDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVY-DRFAEKLQQAVSKLHIGDGLEKG 325 (482)
T ss_pred hcCCcEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEeHHHH-HHHHHHHHHHHhhCCCCCCCCCC
Confidence 38999999999999999999999999999999999998 999999999999999 7999999999887632
Q ss_pred ---------------------------EE-ecCccc--ccc-c-c-C-----CCCccccccccCceEEEEEeCCHHHHHH
Q 006484 572 ---------------------------GL-FGGPRA--SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAID 613 (643)
Q Consensus 572 ---------------------------~~-~g~~~~--~~~-~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~deAi~ 613 (643)
++ .|+... .++ + | | ++|++++||+||||++|++|+|+||||+
T Consensus 326 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~GG~~~~~~g~f~~Ptvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eai~ 405 (482)
T PRK11241 326 VTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHELGGNFFQPTILVDVPANAKVAKEETFGPLAPLFRFKDEADVIA 405 (482)
T ss_pred CCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCCCCCeEEeeEEEECCCCCChhhhCcCcCCEEEEEEeCCHHHHHH
Confidence 12 244321 233 3 6 2 3589999999999999999999999999
Q ss_pred HHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 614 HIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 614 ~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
++|+++|||++||||+|.++++++++++++
T Consensus 406 ~aN~s~~GL~a~Vft~d~~~a~~~~~~l~~ 435 (482)
T PRK11241 406 QANDTEFGLAAYFYARDLSRVFRVGEALEY 435 (482)
T ss_pred HhhCCCCCceEEEEcCCHHHHHHHHHHcCc
Confidence 999999999999999999999999999875
No 10
>PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating]
Probab=100.00 E-value=4.5e-67 Score=579.99 Aligned_cols=350 Identities=17% Similarity=0.217 Sum_probs=294.8
Q ss_pred HHHHcCCceeeEEecCccccccHHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Q 006484 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (643)
Q Consensus 268 ~~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~ 347 (643)
.++.+|+.++++...+ .+++++|+++|++||+.|+++|.++|.++|++++++|++|.++|+.+++.|+|++.
T Consensus 134 ~nP~tg~~i~~v~~a~------~~dv~~Av~aA~~A~~~W~~~~~~eR~~iL~k~a~~L~~~~~ela~~~~~E~GKp~-- 205 (604)
T PLN02419 134 INPATQEVVSKVPLTT------NEEFKAAVSAAKQAFPLWRNTPITTRQRVMLKFQELIRKNMDKLAMNITTEQGKTL-- 205 (604)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCH--
Confidence 3466788889988888 89999999999999999999999999999999999999999999999887765532
Q ss_pred chhhHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHHHHH
Q 006484 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 424 (643)
Q Consensus 348 g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~~A 424 (643)
.++ ..|+..+++.++++++..+. .|+..+. ...+...+++|+|+|||++|+|| ||. +.+++++||
T Consensus 206 --~ea--------~~EV~~~i~~~~~~a~~a~~~~g~~~~~--~~~~~~~~~~reP~GVV~~I~PwNfPl~l~~~~iapA 273 (604)
T PLN02419 206 --KDS--------HGDIFRGLEVVEHACGMATLQMGEYLPN--VSNGVDTYSIREPLGVCAGICPFNFPAMIPLWMFPVA 273 (604)
T ss_pred --HHH--------HHHHHHHHHHHHHHHHHHHHhhCCcccc--cCCCccceEEecCccEEEEECCCccHHHHHHHHHHHH
Confidence 222 13566666666666543321 2322221 11233456789999999999999 485 567999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecCcchHhHhhhCCCCccEEEeecCHHHHHHHHHhc--
Q 006484 425 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 501 (643)
Q Consensus 425 laaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a-- 501 (643)
|++||+||+|||+.||+|+.++++++.+ + ||+|+||+|+|..++++.|..||+||+|+||||+.+|+.|++.|
T Consensus 274 LaAGNtVVlKPSe~tp~ta~~l~~l~~e----AGlP~GvvnvV~G~~~~~~~L~~~~~Vd~V~FTGSt~vG~~I~~~Aa~ 349 (604)
T PLN02419 274 VTCGNTFILKPSEKDPGASVILAELAME----AGLPDGVLNIVHGTNDTVNAICDDEDIRAVSFVGSNTAGMHIYARAAA 349 (604)
T ss_pred HHcCCEEEEeCCCCCcHHHHHHHHHHHH----hCcCcceEEEEeCChHHHHHHHhCCCCCEEEEeCChHHHHHHHHHHhc
Confidence 9999999999999999999999999987 6 99999999996445667677899999999999999999999876
Q ss_pred -CCCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC--------
Q 006484 502 -KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 571 (643)
Q Consensus 502 -~~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~-------- 571 (643)
.+|+++|||||||+||++|||+|.|++.+++|+|.|+| +|+|++|+|||++ | |+|+++|+++++++.+
T Consensus 350 ~lk~v~LELGGknp~IV~~DADld~Aa~~iv~g~f~naGQ~C~A~~Rv~V~~~-~-d~f~e~l~~~~~~l~vG~p~d~~t 427 (604)
T PLN02419 350 KGKRIQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALSTVVFVGD-A-KSWEDKLVERAKALKVTCGSEPDA 427 (604)
T ss_pred cCCcEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhhCCCCcCCCCEEEEeCc-H-HHHHHHHHHHHHHhccCCCCCCCC
Confidence 39999999999999999999999999999999999998 9999999999999 9 7999999999887532
Q ss_pred --------------------------EE-ecCccc------cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHH
Q 006484 572 --------------------------GL-FGGPRA------SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 610 (643)
Q Consensus 572 --------------------------~~-~g~~~~------~~-~~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~de 610 (643)
++ +|+... .+ |+ | | ++|.+++||+||||++|++|+|+||
T Consensus 428 ~~GPlis~~~~~~v~~~i~~A~~~GAkvl~GG~~~~~~~~~~G~f~~PTVL~~v~~d~~i~~eEiFGPVl~V~~~~~~dE 507 (604)
T PLN02419 428 DLGPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEKGNFIGPTILSGVTPDMECYKEEIFGPVLVCMQANSFDE 507 (604)
T ss_pred CccCCCCHHHHHHHHHHHHHHHhcCCEEEeCCccccCCCCCCCeEEeeEEEeCCCCCCHHHcCCCcCCEEEEEecCCHHH
Confidence 22 344321 13 33 5 2 4689999999999999999999999
Q ss_pred HHHHHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 611 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 611 Ai~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
||+++|+++|||++||||+|.+++.++++++++
T Consensus 508 AI~laN~s~yGLaasVfT~d~~~a~~~a~~l~a 540 (604)
T PLN02419 508 AISIINKNKYGNGAAIFTSSGAAARKFQMDIEA 540 (604)
T ss_pred HHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCe
Confidence 999999999999999999999999999999874
No 11
>PLN02174 aldehyde dehydrogenase family 3 member H1
Probab=100.00 E-value=3.9e-66 Score=563.70 Aligned_cols=338 Identities=21% Similarity=0.224 Sum_probs=279.9
Q ss_pred HHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhhHHHHHhhcChhHHHHHHH
Q 006484 290 QVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAK 369 (643)
Q Consensus 290 ~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~ 369 (643)
..++++++++|++||+.|+++|.++|.++|++++++|++|.++|++++++|++++. .++...++..+..+++++++
T Consensus 9 ~~~v~~av~~a~~af~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~l~~e~GKp~----~~a~~~Ev~~~~~~~~~~~~ 84 (484)
T PLN02174 9 AADASILVTELRRSFDDGVTRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPE----LESSVYEVSLLRNSIKLALK 84 (484)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH----HHHHHHHHHHHHHHHHHHHH
Confidence 57999999999999999999999999999999999999999999999998876542 23322233334456666666
Q ss_pred HHHHHhcccccccccccccccCCCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHH
Q 006484 370 SIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILH 447 (643)
Q Consensus 370 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~~AlaaGN~vi~Kps~~tp~t~~~~~ 447 (643)
.++.+.+... ...... ..+...++.|+|+|||++|+|| ||. +++++++|||++||+||+||||.||+|+.+++
T Consensus 85 ~~~~~~~~~~---~~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPse~tp~~~~~l~ 159 (484)
T PLN02174 85 QLKNWMAPEK---AKTSLT--TFPASAEIVSEPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLA 159 (484)
T ss_pred HHHHHhcccc---cccccc--cCCcceEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHH
Confidence 6655432110 111111 1123457889999999999999 585 67899999999999999999999999999999
Q ss_pred HHHHHhcccccCcCceEeecCc-chHhHhhhCCCCccEEEeecCHHHHHHHHHhc---CCCEEEecCccceEEEcCCCCH
Q 006484 448 KVITSAIPDTVGEKLIGLVTSR-EEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---KIPVLGHADGICHVYVDKSANL 523 (643)
Q Consensus 448 ~l~~~a~~~alP~g~v~~v~~~-~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a---~~p~~lelGG~~p~iV~~dAdl 523 (643)
+++.+ +||+|++|+|+|+ +....++ + |+||+|+||||+.+|+.|++.+ .+|+++|||||||+||++|||+
T Consensus 160 ~l~~~----~lp~gvv~vv~G~~~~~~~l~-~-~~vd~V~FTGS~~~G~~I~~~aa~~l~~v~LELGGk~p~iV~~dADl 233 (484)
T PLN02174 160 KLLEQ----YLDSSAVRVVEGAVTETTALL-E-QKWDKIFYTGSSKIGRVIMAAAAKHLTPVVLELGGKSPVVVDSDTDL 233 (484)
T ss_pred HHHHH----hCCCCEEEEEECChHHHHHHh-c-ccCCEEEEECChHHHHHHHHHHHhcCCcEEEecCCCCeEEEcCCCCH
Confidence 99986 4999999999954 4444444 4 7899999999999999999876 4999999999999999999999
Q ss_pred HHHHHHHHhhcC-CCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC------------------------------
Q 006484 524 DVAKNIVIDAKI-DYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------------------------------ 571 (643)
Q Consensus 524 ~~A~~~iv~~~~-~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~------------------------------ 571 (643)
|.|++.+++|+| .|+| +|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 234 ~~Aa~~i~~g~f~~n~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~G~p~~~~~~Gpli~~~~~~~v~~~i~~a~~ 312 (484)
T PLN02174 234 KVTVRRIIAGKWGCNNGQACISPDYILTTKEYA-PKVIDAMKKELETFYGKNPMESKDMSRIVNSTHFDRLSKLLDEKEV 312 (484)
T ss_pred HHHHHHHHHHHhhCCCCCCCCcCcEEEEeHHHH-HHHHHHHHHHHHhhcCCCCcccCCcCCCCCHHHHHHHHHHHHHHHc
Confidence 999999999999 5887 999999999999999 7999999998876521
Q ss_pred --EE-ecCccc-cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEecCHHHHHHHHH
Q 006484 572 --GL-FGGPRA-SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLC 639 (643)
Q Consensus 572 --~~-~g~~~~-~~-~~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~~~~~~~ 639 (643)
++ +|+... .+ ++ | | ++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++
T Consensus 313 ga~~~~GG~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eai~~aN~~~~gLaa~vft~d~~~a~~~~~ 392 (484)
T PLN02174 313 SDKIVYGGEKDRENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHNKKLKERFAA 392 (484)
T ss_pred CCEEEECCCcCCCCCEEEEEEEecCCCCChhhcCCcCCCeEEEecCCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHH
Confidence 12 344322 13 23 5 2 358999999999999999999999999999999999999999999999999999
Q ss_pred hcCC
Q 006484 640 QVDR 643 (643)
Q Consensus 640 ~l~~ 643 (643)
++++
T Consensus 393 ~l~a 396 (484)
T PLN02174 393 TVSA 396 (484)
T ss_pred cCCc
Confidence 9875
No 12
>PLN02315 aldehyde dehydrogenase family 7 member
Probab=100.00 E-value=1.3e-65 Score=566.37 Aligned_cols=354 Identities=17% Similarity=0.231 Sum_probs=296.2
Q ss_pred HHHHcCCceeeEEecCccccccHHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Q 006484 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (643)
Q Consensus 268 ~~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~ 347 (643)
.+|.+++.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|++|.++|+++++.|++++.
T Consensus 39 ~nP~t~~~i~~~~~a~------~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~GK~~-- 110 (508)
T PLN02315 39 VNPANNQPIAEVVEAS------LEDYEEGLRACEEAAKIWMQVPAPKRGEIVRQIGDALRAKLDYLGRLVSLEMGKIL-- 110 (508)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCH--
Confidence 4567888889988777 88999999999999999999999999999999999999999999999887765542
Q ss_pred chhhHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHHHHH
Q 006484 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 424 (643)
Q Consensus 348 g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~~A 424 (643)
.++ ..++..+++.++++++..+. .|...+. . ..+...+..|+|+|||++|+|| ||. +++++++||
T Consensus 111 --~~a--------~~ev~~~i~~~~~~~~~~~~l~~~~~~~-~-~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~A 178 (508)
T PLN02315 111 --AEG--------IGEVQEIIDMCDFAVGLSRQLNGSIIPS-E-RPNHMMMEVWNPLGIVGVITAFNFPCAVLGWNACIA 178 (508)
T ss_pred --HHH--------HHHHHHHHHHHHHHHHHHHHhcCccccC-C-CCCceeEEEEecceEEEEECCCcchHHHHHHHHhHH
Confidence 122 13555566666665543221 1222221 1 1223446789999999999998 595 678999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecCcchHhHhhhCCCCccEEEeecCHHHHHHHHHhc--
Q 006484 425 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 501 (643)
Q Consensus 425 laaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a-- 501 (643)
|++||+||+||||.||.++.++++++.+++.++ +|+|++|+|+++.++++.|..||+||+|+||||+++|+.|++.+
T Consensus 179 LaaGN~VVlKPs~~tp~~~~~~~~l~~~~~~~aGlP~gvv~~v~g~~~~~~~l~~~~~v~~v~fTGS~~~G~~v~~~aa~ 258 (508)
T PLN02315 179 LVCGNCVVWKGAPTTPLITIAMTKLVAEVLEKNNLPGAIFTSFCGGAEIGEAIAKDTRIPLVSFTGSSKVGLMVQQTVNA 258 (508)
T ss_pred HHcCCEEEeeCCCcChHHHHHHHHHHHHHHHHcCCCcccEEEecCChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh
Confidence 999999999999999999999888887777778 99999999997656788888899999999999999999998865
Q ss_pred -CCCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC--------
Q 006484 502 -KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 571 (643)
Q Consensus 502 -~~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~-------- 571 (643)
.+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|++|+|||++|| |+|+++|+++++++.+
T Consensus 259 ~~~~~~lElgGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~vG~p~~~~~ 337 (508)
T PLN02315 259 RFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLLLHESIY-DDVLEQLLTVYKQVKIGDPLEKGT 337 (508)
T ss_pred cCCCEEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeHHHH-HHHHHHHHHHHHhcCCCCCCCCCC
Confidence 38999999999999999999999999999999999988 999999999999999 7999999999987632
Q ss_pred --------------------------EE-ecCccc--cc-cc-c-C----CCCccccccccCceEEEEEeCCHHHHHHHH
Q 006484 572 --------------------------GL-FGGPRA--SK-LL-Q-I----PETRLFHHEYNSMVCTVEIVDDVRAAIDHI 615 (643)
Q Consensus 572 --------------------------~~-~g~~~~--~~-~~-p-v----~~~~~~~eE~FgPvl~v~~~~~~deAi~~a 615 (643)
++ +|+... .+ ++ | | ++|.+++||+||||++|++|+|+||||+++
T Consensus 338 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl~v~~~~~i~~eE~FGPVl~V~~~~~~deai~~a 417 (508)
T PLN02315 338 LLGPLHTPESKKNFEKGIEIIKSQGGKILTGGSAIESEGNFVQPTIVEISPDADVVKEELFGPVLYVMKFKTLEEAIEIN 417 (508)
T ss_pred CCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEecEEEecCCCChHHhCCCcCCEEEEEEeCCHHHHHHHH
Confidence 11 233211 12 33 5 2 468999999999999999999999999999
Q ss_pred HccCCCceeEEEecCHHHHHHHHH--hcC
Q 006484 616 HQHGSAHTDCIVAEDQKVAETFLC--QVD 642 (643)
Q Consensus 616 N~~~~GL~a~v~t~d~~~~~~~~~--~l~ 642 (643)
|+++|||++||||+|.++++++++ +++
T Consensus 418 N~~~~gL~a~Vft~d~~~a~~~~~~~~l~ 446 (508)
T PLN02315 418 NSVPQGLSSSIFTRNPETIFKWIGPLGSD 446 (508)
T ss_pred hCCCCCCeEEEEcCCHHHHHHHhhhcccc
Confidence 999999999999999999999985 454
No 13
>TIGR03374 ABALDH 1-pyrroline dehydrogenase. Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family.
Probab=100.00 E-value=1.7e-65 Score=562.87 Aligned_cols=352 Identities=14% Similarity=0.150 Sum_probs=294.2
Q ss_pred HHHHcCCceeeEEecCccccccHHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Q 006484 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (643)
Q Consensus 268 ~~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~ 347 (643)
.+|.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|++|.++|++++++|++++..
T Consensus 21 ~~P~tg~~i~~~~~~~------~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~- 93 (472)
T TIGR03374 21 YNPATGEVILEIAEAS------AEQVDAAVRAADAAFAEWGQTTPKARAECLLKLADVIEENAQVFAELESRNCGKPLH- 93 (472)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH-
Confidence 3466788899988888 889999999999999999999999999999999999999999999988877654321
Q ss_pred chhhHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHHHHH
Q 006484 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 424 (643)
Q Consensus 348 g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~~A 424 (643)
++. ..++..+++.++++++..+. .+...+.. ..+...++.|+|+|||++|+|| ||. +.+++++||
T Consensus 94 ---~~~-------~~ev~~~~~~~~~~a~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~A 161 (472)
T TIGR03374 94 ---SVF-------NDEIPAIVDVFRFFAGAARCLSGLAAGEY--LEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPA 161 (472)
T ss_pred ---HHH-------HHHHHHHHHHHHHHHHHHHHhcCcccCcc--CCCceEEEEEecceEEEEECCCCchHHHHHHHHHHH
Confidence 111 12455555555555433221 12211111 1233457889999999999999 485 567999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccccCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHHhc--
Q 006484 425 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 501 (643)
Q Consensus 425 laaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~alP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a-- 501 (643)
|++||+||+|||+.+|.++.++++++.+ +||+|++|+|++ +.++++.|..||+||+|+||||+.+|++|++.+
T Consensus 162 LaaGN~VV~KPs~~tp~~~~~l~~l~~~----~lP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~ 237 (472)
T TIGR03374 162 LAAGNCVVLKPSEITPLTALKLAELAKD----IFPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHTAP 237 (472)
T ss_pred HhcCCEEEecCCCCCCHHHHHHHHHHHH----hCCcCeEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhh
Confidence 9999999999999999999999999976 499999999995 566788888899999999999999999998877
Q ss_pred -CCCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC--------
Q 006484 502 -KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 571 (643)
Q Consensus 502 -~~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~-------- 571 (643)
.+|+++|||||||+||++|||+|.|++.+++++|.|+| +|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 238 ~~~~~~lElGGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~l~~G~p~~~~~ 316 (472)
T TIGR03374 238 SIKRTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIY-DTLVEKLGAAVATLKSGAPDDEST 316 (472)
T ss_pred cccceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCccccCCEEEEcHHHH-HHHHHHHHHHHhcCCCCCCCCCCC
Confidence 39999999999999999999999999999999999988 999999999999999 7999999999887531
Q ss_pred ---------------------------EE-ecCccc--ccc-c-c-C-----CCCccccccccCceEEEEEeCCHHHHHH
Q 006484 572 ---------------------------GL-FGGPRA--SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAID 613 (643)
Q Consensus 572 ---------------------------~~-~g~~~~--~~~-~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~deAi~ 613 (643)
++ .|+... .++ + | | ++|++++||+||||++|++|+|+||||+
T Consensus 317 ~~Gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~ 396 (472)
T TIGR03374 317 ELGPLSSLAHLERVMKAVEEAKALGHIKVITGGEKRKGNGYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSFDDEEQVVN 396 (472)
T ss_pred cCCCCCCHHHHHHHHHHHHHHHHcCCeEEEeCCccCCCCCeEEeeEEEeCCCCCChhhhCCccCceEEEEEECCHHHHHH
Confidence 12 233221 133 3 5 2 3589999999999999999999999999
Q ss_pred HHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 614 HIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 614 ~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
++|+++|||++||||+|.+++.++++++++
T Consensus 397 ~an~~~~gL~a~vft~d~~~~~~~~~~l~~ 426 (472)
T TIGR03374 397 WANDSQYGLASSVWTKDVGRAHRLSARLQY 426 (472)
T ss_pred HHhCCCCCceEEEECCCHHHHHHHHHhCCc
Confidence 999999999999999999999999999875
No 14
>cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B. Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer.
Probab=100.00 E-value=5.7e-65 Score=560.44 Aligned_cols=352 Identities=18% Similarity=0.240 Sum_probs=293.5
Q ss_pred HHHHcCCceeeEEecCccccccHHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Q 006484 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (643)
Q Consensus 268 ~~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~ 347 (643)
.+|.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|++|+++|+++++.|++++.
T Consensus 17 ~~P~t~~~i~~~~~~~------~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~-- 88 (474)
T cd07130 17 ISPANGEPIARVRQAT------PEDYESTIKAAQEAFKEWRDVPAPKRGEIVRQIGDALRKKKEALGKLVSLEMGKIL-- 88 (474)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH--
Confidence 4467788889988887 88999999999999999999999999999999999999999999998877765432
Q ss_pred chhhHHHHHhhcChhHHHHHHHHHHHHhcccccc-cccccccccCCCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHHHHH
Q 006484 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 424 (643)
Q Consensus 348 g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~~A 424 (643)
.++. .++..+++.++++++..+.. +...+. . ..+...+..++|+|||++|+|| ||. ++++++++|
T Consensus 89 --~~a~--------~ev~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~A 156 (474)
T cd07130 89 --PEGL--------GEVQEMIDICDFAVGLSRQLYGLTIPS-E-RPGHRMMEQWNPLGVVGVITAFNFPVAVWGWNAAIA 156 (474)
T ss_pred --HHHH--------HHHHHHHHHHHHHHHhHHHhcCccccC-C-CCCceEEEEEecceeEEEEccCCCHHHHHHHHhhHH
Confidence 1221 24455555555544332221 222111 1 1233456789999999999998 595 567899999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecCcchHhHhhhCCCCccEEEeecCHHHHHHHHHhc--
Q 006484 425 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 501 (643)
Q Consensus 425 laaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a-- 501 (643)
|++||+||+|||+.||.|+.++++++.+++.++ ||+|++|+|+++.++++.|..||+||+|+||||+.+|+.|++.+
T Consensus 157 LaaGN~VvlKps~~~p~~~~~l~~l~~~~~~~aglP~gv~~~v~g~~~~~~~L~~~~~vd~V~fTGs~~~g~~i~~~aa~ 236 (474)
T cd07130 157 LVCGNVVVWKPSPTTPLTAIAVTKIVARVLEKNGLPGAIASLVCGGADVGEALVKDPRVPLVSFTGSTAVGRQVGQAVAA 236 (474)
T ss_pred HHcCCeEEeeCCccCHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhHHHHHhcCCCCCEEEEECchHHHHHHHHHHHh
Confidence 999999999999999999999999999888888 99999999996545678888899999999999999999998876
Q ss_pred -CCCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC--------
Q 006484 502 -KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 571 (643)
Q Consensus 502 -~~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~-------- 571 (643)
.+|+++|||||||+||++|||+|.|++.+++|+|.|+| +|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 237 ~~~~~~lElGGk~p~iV~~dadl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~~g~p~~~~~ 315 (474)
T cd07130 237 RFGRSLLELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESIY-DEVLERLKKAYKQVRIGDPLDDGT 315 (474)
T ss_pred cCCCEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEcHhHH-HHHHHHHHHHHhcCCcCCCCCCCC
Confidence 38999999999999999999999999999999999998 999999999999999 7999999999887532
Q ss_pred --------------------------EE-ecCccc--cc-cc-c-C----CCCccccccccCceEEEEEeCCHHHHHHHH
Q 006484 572 --------------------------GL-FGGPRA--SK-LL-Q-I----PETRLFHHEYNSMVCTVEIVDDVRAAIDHI 615 (643)
Q Consensus 572 --------------------------~~-~g~~~~--~~-~~-p-v----~~~~~~~eE~FgPvl~v~~~~~~deAi~~a 615 (643)
++ +|+... .+ ++ | | ++|++++||+||||++|++|+|+||||+++
T Consensus 316 ~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~a 395 (474)
T cd07130 316 LVGPLHTKAAVDNYLAAIEEAKSQGGTVLFGGKVIDGPGNYVEPTIVEGLSDAPIVKEETFAPILYVLKFDTLEEAIAWN 395 (474)
T ss_pred CCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEccEEEecCCCCHHHhCCCcCCeEEEEEeCCHHHHHHHH
Confidence 11 233221 13 33 5 2 348899999999999999999999999999
Q ss_pred HccCCCceeEEEecCHHHHHHHHHh
Q 006484 616 HQHGSAHTDCIVAEDQKVAETFLCQ 640 (643)
Q Consensus 616 N~~~~GL~a~v~t~d~~~~~~~~~~ 640 (643)
|+++|||++||||+|.+++++++++
T Consensus 396 N~~~~gL~a~v~t~d~~~a~~~~~~ 420 (474)
T cd07130 396 NEVPQGLSSSIFTTDLRNAFRWLGP 420 (474)
T ss_pred hCCCCCceEEEEcCCHHHHHHHHhh
Confidence 9999999999999999999999876
No 15
>PLN02766 coniferyl-aldehyde dehydrogenase
Probab=100.00 E-value=6.2e-65 Score=561.82 Aligned_cols=351 Identities=18% Similarity=0.191 Sum_probs=294.7
Q ss_pred HHHHcCCceeeEEecCccccccHHhHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Q 006484 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSR--RLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 345 (643)
Q Consensus 268 ~~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~ 345 (643)
.+|.+|+.++++...+ .+++++++++|++||+ .|+.+|.++|.++|++++++|++|.++|++++++|++++.
T Consensus 41 ~~P~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 114 (501)
T PLN02766 41 RDPRTGEVIARIAEGD------KEDVDLAVKAAREAFDHGPWPRMSGFERGRIMMKFADLIEEHIEELAALDTIDAGKLF 114 (501)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCH
Confidence 4567888899988887 8899999999999998 5999999999999999999999999999999887765432
Q ss_pred HhchhhHHHHHhhcChhHHHHHHHHHHHHhcccc-cccccccccccCCCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHHH
Q 006484 346 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 422 (643)
Q Consensus 346 ~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~ 422 (643)
.++.. .++..+++.++++++..+ ..|+.... ..+...+++|+|+|||++|+|| ||. +.+++++
T Consensus 115 ----~~a~~-------~ev~~~~~~l~~~a~~~~~~~g~~~~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~ 180 (501)
T PLN02766 115 ----ALGKA-------VDIPAAAGLLRYYAGAADKIHGETLKM---SRQLQGYTLKEPIGVVGHIIPWNFPSTMFFMKVA 180 (501)
T ss_pred ----HHHHH-------HHHHHHHHHHHHHHHHHHHhcCceecc---CCCceEEEEeccceEEEEECCCCChHHHHHHHHH
Confidence 12211 245556666666654322 22322211 1233457789999999999999 585 5679999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHHh
Q 006484 423 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 500 (643)
Q Consensus 423 ~AlaaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~ 500 (643)
|||++||+||+||||.||.++.++++++.+ + ||+|++|+|++ +.++++.|..||+||+|+||||+.+|++|++.
T Consensus 181 ~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~----aGlP~gvv~~v~g~~~~~~~~L~~~p~v~~V~FTGS~~~G~~i~~~ 256 (501)
T PLN02766 181 PALAAGCTMVVKPAEQTPLSALFYAHLAKL----AGVPDGVINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVGRKIMQA 256 (501)
T ss_pred HHHHcCCEEEEeCCCCchHHHHHHHHHHHh----cCCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence 999999999999999999999999999987 7 99999999995 55678888889999999999999999999886
Q ss_pred cC----CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC----
Q 006484 501 TK----IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV---- 571 (643)
Q Consensus 501 a~----~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~---- 571 (643)
+. +|+++|||||||+||++|||+|.|++.+++|+|.|+| +|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 257 aa~~~l~~~~lElGGknp~iV~~dADl~~Aa~~i~~g~f~n~GQ~C~a~~ri~V~~si~-d~f~~~l~~~~~~l~~G~p~ 335 (501)
T PLN02766 257 AATSNLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIY-DEFVKKLVEKAKDWVVGDPF 335 (501)
T ss_pred hhhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHH-HHHHHHHHHHHHhccCCCCC
Confidence 63 8999999999999999999999999999999999988 999999999999999 7999999998877521
Q ss_pred ------------------------------EE-ecCccc--cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHH
Q 006484 572 ------------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 610 (643)
Q Consensus 572 ------------------------------~~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~de 610 (643)
++ +|+... .+ ++ | | ++|++++||+||||++|++|+|+||
T Consensus 336 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~de 415 (501)
T PLN02766 336 DPRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPCGDKGYYIEPTIFTDVTEDMKIAQDEIFGPVMSLMKFKTVEE 415 (501)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhCCccCceEEEEEeCCHHH
Confidence 12 243321 23 33 5 2 3579999999999999999999999
Q ss_pred HHHHHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 611 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 611 Ai~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
||+++|+++|||++||||+|.+++.++++++++
T Consensus 416 ai~~aN~~~~GL~a~Vft~d~~~a~~~~~~l~~ 448 (501)
T PLN02766 416 AIKKANNTKYGLAAGIVTKDLDVANTVSRSIRA 448 (501)
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhCCc
Confidence 999999999999999999999999999999875
No 16
>PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed
Probab=100.00 E-value=1.3e-64 Score=554.10 Aligned_cols=352 Identities=19% Similarity=0.200 Sum_probs=289.3
Q ss_pred HHHcCCceeeEEecCccccccHHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhc
Q 006484 269 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 348 (643)
Q Consensus 269 ~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~g 348 (643)
+|.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|++++++|++++++|++++.
T Consensus 7 ~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~--- 77 (457)
T PRK09406 7 NPATGETVKTFTALT------DDEVDAAIARAHARFRDYRTTTFAQRARWANAAADLLEAEADQVAALMTLEMGKTL--- 77 (457)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHhcCCCH---
Confidence 467888899988887 88999999999999999999999999999999999999999999999887765542
Q ss_pred hhhHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHHHHHH
Q 006484 349 YAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAI 425 (643)
Q Consensus 349 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~~Al 425 (643)
.++. .++..+++.++++++..+. .+..........+...+++++|+|||++|+|| ||. +.++++++||
T Consensus 78 -~~a~--------~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~Pl~~~~~~~~~AL 148 (457)
T PRK09406 78 -ASAK--------AEALKCAKGFRYYAEHAEALLADEPADAAAVGASRAYVRYQPLGVVLAVMPWNFPLWQVVRFAAPAL 148 (457)
T ss_pred -HHHH--------HHHHHHHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEecceeEEEECCccchHHHHHHHHHHHH
Confidence 1221 2344444444444432211 11111000001223457789999999999999 585 5678999999
Q ss_pred HhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecCcchHhHhhhCCCCccEEEeecCHHHHHHHHHhcC--
Q 006484 426 RSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK-- 502 (643)
Q Consensus 426 aaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a~-- 502 (643)
++||+||+|||+.+|.++.++++++.+ + ||+|++|+|+++...+..|..||+|++|+||||+.+|+.|++.++
T Consensus 149 aaGN~VV~Kps~~~p~~~~~l~~l~~~----aGlP~gvv~~v~~g~~~~~~l~~~~~i~~V~fTGs~~~G~~i~~~a~~~ 224 (457)
T PRK09406 149 MAGNVGLLKHASNVPQTALYLADLFRR----AGFPDGCFQTLLVGSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAGDE 224 (457)
T ss_pred HcCCEEEEECCCcCcHHHHHHHHHHHH----hCCCcCcEEEEcCCchhHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhc
Confidence 999999999999999999999999987 7 999999999843334444567899999999999999999988763
Q ss_pred -CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC---------
Q 006484 503 -IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV--------- 571 (643)
Q Consensus 503 -~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~--------- 571 (643)
||+++|||||||+||++|||+|.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++++
T Consensus 225 ~~~~~lElGG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~~g~p~~~~~~ 303 (457)
T PRK09406 225 IKKTVLELGGSDPFIVMPSADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVY-DAFAEKFVARMAALRVGDPTDPDTD 303 (457)
T ss_pred CCceeeecCCCCeeEECCCCCHHHHHHHHHHHHhhCCCCcccCCeEEEEcHHHH-HHHHHHHHHHHhhCCCCCCCCCCCC
Confidence 8999999999999999999999999999999999998 999999999999999 7999999999987642
Q ss_pred -------------------------EE-ecCccc--ccc-c-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHH
Q 006484 572 -------------------------GL-FGGPRA--SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHI 615 (643)
Q Consensus 572 -------------------------~~-~g~~~~--~~~-~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~deAi~~a 615 (643)
++ +|+... .++ + | | ++|.+++||+||||++|++|+|+||||+++
T Consensus 304 ~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~ 383 (457)
T PRK09406 304 VGPLATEQGRDEVEKQVDDAVAAGATILCGGKRPDGPGWFYPPTVITDITPDMRLYTEEVFGPVASLYRVADIDEAIEIA 383 (457)
T ss_pred CCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCceEccEEeecCCCCCHHhhCCCCCceEEEEeeCCHHHHHHHH
Confidence 11 233221 233 3 5 2 347899999999999999999999999999
Q ss_pred HccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 616 HQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 616 N~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
|+++|||++||||+|.+++.++++++++
T Consensus 384 n~~~~gL~~~v~t~d~~~~~~~~~~l~~ 411 (457)
T PRK09406 384 NATTFGLGSNAWTRDEAEQERFIDDLEA 411 (457)
T ss_pred hCCCCCceEEEEcCCHHHHHHHHHhCCc
Confidence 9999999999999999999999999874
No 17
>PRK13968 putative succinate semialdehyde dehydrogenase; Provisional
Probab=100.00 E-value=1.6e-64 Score=554.13 Aligned_cols=349 Identities=16% Similarity=0.223 Sum_probs=290.8
Q ss_pred HHHHcCCceeeEEecCccccccHHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Q 006484 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (643)
Q Consensus 268 ~~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~ 347 (643)
.+|.+|+.++++...+ .+++++++++|++||+.|++++.++|.++|++++++|++|.++|+++++.|.+++.
T Consensus 12 ~nP~t~~~i~~~~~~~------~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-- 83 (462)
T PRK13968 12 VNPATGEQLSVLPWAG------ADDIENALQLAAAGFRDWRETNIDYRAQKLRDIGKALRARSEEMAQMITREMGKPI-- 83 (462)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCH--
Confidence 3467888899988888 88999999999999999999999999999999999999999999999887775542
Q ss_pred chhhHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCeeEEEEeeeeeeEEEEcCCC-ch-hHHHHHHHH
Q 006484 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFESR-PD-ALVQIASLA 424 (643)
Q Consensus 348 g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~~-P~-~~~~~~~~A 424 (643)
.++. .++..+++.+++++...+. .+..... ..+...+++|+|+|||++|+||| |. +.+++++||
T Consensus 84 --~~a~--------~ev~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~~~~A 150 (462)
T PRK13968 84 --NQAR--------AEVAKSANLCDWYAEHGPAMLKAEPTL---VENQQAVIEYRPLGTILAIMPWNFPLWQVMRGAVPI 150 (462)
T ss_pred --HHHH--------HHHHHHHHHHHHHHHHHHHhhCCcccc---CCCceEEEEEeccceEEEEcCCchHHHHHHHHHHHH
Confidence 1221 2445555555555432211 1111110 12334578899999999999995 85 567899999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHHhc-
Q 006484 425 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 501 (643)
Q Consensus 425 laaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a- 501 (643)
|++||+||+||||.||.++.++++++.+ + ||+|++|+|++ ++.... +..||+||+|+||||+.+|++|++.+
T Consensus 151 LaaGN~vv~KPs~~tp~~~~~l~~~~~~----aGlP~gv~~~v~g~~~~~~~-l~~~~~v~~V~fTGs~~~G~~i~~~aa 225 (462)
T PRK13968 151 LLAGNGYLLKHAPNVMGCAQLIAQVFKD----AGIPQGVYGWLNADNDGVSQ-MINDSRIAAVTVTGSVRAGAAIGAQAG 225 (462)
T ss_pred HHcCCEEEEECCCcChHHHHHHHHHHHH----cCcCcCcEEEEecCchhhHH-HhcCCCCCEEEEECCHHHHHHHHHHHh
Confidence 9999999999999999999999999987 7 99999999995 444555 45788999999999999999999877
Q ss_pred --CCCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC-------
Q 006484 502 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 571 (643)
Q Consensus 502 --~~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~------- 571 (643)
.+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 226 ~~l~~~~lElGGk~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~~~~g~p~~~~ 304 (462)
T PRK13968 226 AALKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIA-SAFTERFVAAAAALKMGDPRDEE 304 (462)
T ss_pred hcCCcEEEecCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEECHhHH-HHHHHHHHHHHhcCCcCCCCCCC
Confidence 49999999999999999999999999999999999998 999999999999999 7999999999887632
Q ss_pred ---------------------------EE-ecCccc--cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHHHH
Q 006484 572 ---------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAID 613 (643)
Q Consensus 572 ---------------------------~~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~deAi~ 613 (643)
++ +|+... .+ ++ | | ++|.+++||+||||++|++|+|+||||+
T Consensus 305 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~d~~eai~ 384 (462)
T PRK13968 305 NALGPMARFDLRDELHHQVEATLAEGARLLLGGEKIAGAGNYYAPTVLANVTPEMTAFREELFGPVAAITVAKDAEHALE 384 (462)
T ss_pred CCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCceEECCEEEeCCCCCChHHhCCCcCCEEEEEEECCHHHHHH
Confidence 11 243321 12 33 5 2 3578999999999999999999999999
Q ss_pred HHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 614 HIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 614 ~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
++|+++|||++||||+|.+++.+|++++++
T Consensus 385 ~~n~~~~gLs~~v~t~d~~~a~~~~~~l~~ 414 (462)
T PRK13968 385 LANDSEFGLSATIFTTDETQARQMAARLEC 414 (462)
T ss_pred HHhCCCCcceEEEEcCCHHHHHHHHHhCCc
Confidence 999999999999999999999999999874
No 18
>cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins. ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105).
Probab=100.00 E-value=1.9e-64 Score=557.33 Aligned_cols=355 Identities=20% Similarity=0.251 Sum_probs=299.7
Q ss_pred HHHHcCCceeeEEecCccccccHHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Q 006484 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (643)
Q Consensus 268 ~~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~ 347 (643)
.+|.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|++|.++|+++++.|++++.
T Consensus 18 ~~P~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-- 89 (478)
T cd07086 18 RNPANGEPIARVFPAS------PEDVEAAVAAAREAFKEWRKVPAPRRGEIVRQIGEALRKKKEALGRLVSLEMGKIL-- 89 (478)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCH--
Confidence 4467888899988887 88999999999999999999999999999999999999999999998877665431
Q ss_pred chhhHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHHHHH
Q 006484 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 424 (643)
Q Consensus 348 g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~~A 424 (643)
.++ ..++..+++.++++++..+. .+...+. . ..+...+.+|+|+|||++|+|| ||. ++++++++|
T Consensus 90 --~~a--------~~ev~~~~~~~~~~a~~~~~~~g~~~~~-~-~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~A 157 (478)
T cd07086 90 --PEG--------LGEVQEMIDICDYAVGLSRMLYGLTIPS-E-RPGHRLMEQWNPLGVVGVITAFNFPVAVPGWNAAIA 157 (478)
T ss_pred --HHH--------HHHHHHHHHHHHHHHHHHHHhcCccccc-C-CCCceEEEEEecceeEEEECCCCcHHHHHHHHHHHH
Confidence 122 12455566666655543321 1222221 1 1233457889999999999998 595 678999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecCcchHhHhhhCCCCccEEEeecCHHHHHHHHHhc--
Q 006484 425 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 501 (643)
Q Consensus 425 laaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a-- 501 (643)
|++||+||+|||+.+|.|+..++++++++|.++ +|+|++|+|++...++++|.+||+||+|+||||+.+|+.|++.+
T Consensus 158 LaaGN~VIlKps~~~p~~~~~l~~~~~~al~~~glP~gvv~~v~g~~~~~~~L~~~~~vd~v~fTGs~~~g~~i~~~aa~ 237 (478)
T cd07086 158 LVCGNTVVWKPSETTPLTAIAVTKILAEVLEKNGLPPGVVNLVTGGGDGGELLVHDPRVPLVSFTGSTEVGRRVGETVAR 237 (478)
T ss_pred HHcCCeEEEECCCcchHHHHHHHHHHHHhhhccCCCccceEEEecCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc
Confidence 999999999999999999999999999999888 99999999996444888888999999999999999999998876
Q ss_pred -CCCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC--------
Q 006484 502 -KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 571 (643)
Q Consensus 502 -~~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~-------- 571 (643)
.+|+++|||||||+||++|||+|.|++.+++|+|.|+| +|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 238 ~~~~~~lElGG~~p~iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~~~ 316 (478)
T cd07086 238 RFGRVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESVY-DEFLERLVKAYKQVRIGDPLDEGT 316 (478)
T ss_pred cCCcEEeecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCCCcCCeEEEEcHHHH-HHHHHHHHHHHHhCCcCCCCCCCC
Confidence 38999999999999999999999999999999999998 999999999999999 7999999999887532
Q ss_pred --------------------------EE-ecCccc----cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHHH
Q 006484 572 --------------------------GL-FGGPRA----SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAI 612 (643)
Q Consensus 572 --------------------------~~-~g~~~~----~~-~~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~deAi 612 (643)
++ +|+... .+ ++ | | +++++++||+||||++|++|+|+||||
T Consensus 317 ~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPVl~v~~~~~~deai 396 (478)
T cd07086 317 LVGPLINQAAVEKYLNAIEIAKSQGGTVLTGGKRIDGGEPGNYVEPTIVTGVTDDARIVQEETFAPILYVIKFDSLEEAI 396 (478)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEecCCCCCChhhcCCCcCCEEEEEEeCCHHHHH
Confidence 22 244322 13 33 5 2 348999999999999999999999999
Q ss_pred HHHHccCCCceeEEEecCHHHHHHHHHh--cCC
Q 006484 613 DHIHQHGSAHTDCIVAEDQKVAETFLCQ--VDR 643 (643)
Q Consensus 613 ~~aN~~~~GL~a~v~t~d~~~~~~~~~~--l~~ 643 (643)
+++|+++|||++||||+|.+++++|+++ +++
T Consensus 397 ~~~n~~~~gL~a~v~t~d~~~a~~~~~~~~~~~ 429 (478)
T cd07086 397 AINNDVPQGLSSSIFTEDLREAFRWLGPKGSDC 429 (478)
T ss_pred HHHhCCCCcceEEEEcCCHHHHHHHHhcCcccc
Confidence 9999999999999999999999999999 764
No 19
>PLN02278 succinic semialdehyde dehydrogenase
Probab=100.00 E-value=2.5e-64 Score=557.14 Aligned_cols=351 Identities=16% Similarity=0.164 Sum_probs=296.1
Q ss_pred HHHHcCCceeeEEecCccccccHHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Q 006484 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (643)
Q Consensus 268 ~~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~ 347 (643)
.+|.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|++|.++|+++++.|++++.
T Consensus 45 ~~P~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~-- 116 (498)
T PLN02278 45 YNPATGEVIANVPCMG------RAETNDAIASAHDAFPSWSKLTASERSKILRRWYDLIIANKEDLAQLMTLEQGKPL-- 116 (498)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH--
Confidence 5678888889887777 88999999999999999999999999999999999999999999999887765432
Q ss_pred chhhHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHHHHH
Q 006484 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 424 (643)
Q Consensus 348 g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~~A 424 (643)
.++ ..++..+++.++++++..+. .|...+. . ..+...+++|+|+|||++|+|| ||. +.+++++||
T Consensus 117 --~~a--------~~Ev~~~i~~~~~~~~~~~~~~g~~~~~-~-~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~i~~A 184 (498)
T PLN02278 117 --KEA--------IGEVAYGASFLEYFAEEAKRVYGDIIPS-P-FPDRRLLVLKQPVGVVGAITPWNFPLAMITRKVGPA 184 (498)
T ss_pred --HHH--------HHHHHHHHHHHHHHHHHHHHhcCccccc-C-CCCceEEEEeecccEEEEECCCccHHHHHHHHHHHH
Confidence 122 12556666666665543322 2322221 1 1233456789999999999999 585 567899999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHHhcC
Q 006484 425 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK 502 (643)
Q Consensus 425 laaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a~ 502 (643)
|++||+||+|||+.+|.++..+.+++.+ + ||+|++|+|++ +.+.++.|..||+||+|+||||+.+|++|++.++
T Consensus 185 LaaGN~VVlKps~~tp~~~~~l~~~l~e----aglP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa 260 (498)
T PLN02278 185 LAAGCTVVVKPSELTPLTALAAAELALQ----AGIPPGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAVGKKLMAGAA 260 (498)
T ss_pred HHcCCEEEEECCCCChHHHHHHHHHHHH----cCCCcccEEEEecCChhhHHHHhcCCCcCEEEEECcHHHHHHHHHHHh
Confidence 9999999999999999999999999987 6 99999999995 5566777778999999999999999999998773
Q ss_pred ---CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC-------
Q 006484 503 ---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 571 (643)
Q Consensus 503 ---~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~------- 571 (643)
+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 261 ~~~~~~~lElGGk~~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-~~f~~~L~~~~~~l~~G~p~~~~ 339 (498)
T PLN02278 261 ATVKRVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRILVQEGIY-DKFAEAFSKAVQKLVVGDGFEEG 339 (498)
T ss_pred hcCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHhccCCCCCcCCcEEEEeHHHH-HHHHHHHHHHHHhcCCCCCCCCC
Confidence 8999999999999999999999999999999999998 999999999999999 7999999999887632
Q ss_pred ---------------------------EE-ecCccc--cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHHHH
Q 006484 572 ---------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAID 613 (643)
Q Consensus 572 ---------------------------~~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~deAi~ 613 (643)
++ +|+... .+ ++ | | +++++++||+||||++|++|+|+||||+
T Consensus 340 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~~E~FGPVl~v~~~~~~deai~ 419 (498)
T PLN02278 340 VTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGKRHSLGGTFYEPTVLGDVTEDMLIFREEVFGPVAPLTRFKTEEEAIA 419 (498)
T ss_pred CcCCCccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCceEeeEEEecCCCCChhhhCCCcCCEEEEEeeCCHHHHHH
Confidence 11 233221 12 33 5 2 3588999999999999999999999999
Q ss_pred HHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 614 HIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 614 ~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
++|+++|||++||||+|.++++++++++++
T Consensus 420 ~~N~~~~gL~a~vft~d~~~~~~~~~~l~~ 449 (498)
T PLN02278 420 IANDTEAGLAAYIFTRDLQRAWRVSEALEY 449 (498)
T ss_pred HHhCCCCCceEEEEcCCHHHHHHHHHhCCc
Confidence 999999999999999999999999999875
No 20
>cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like. NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate.
Probab=100.00 E-value=2.6e-64 Score=556.15 Aligned_cols=354 Identities=15% Similarity=0.135 Sum_probs=293.1
Q ss_pred HHHHcCCceeeEEecCccccccHHhHHHHHHHHHHHHHH-HhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Q 006484 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRR-LQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 346 (643)
Q Consensus 268 ~~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~-w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~ 346 (643)
.++.+|+.++++...+ .+++++++++|++||+. |+++|.++|.++|++++++|+++.++|+++++.|.+++.
T Consensus 20 ~~P~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~- 92 (477)
T cd07113 20 TNPATEQVIASVASAT------EADVDAAVASAWRAFVSAWAKTTPAERGRILLRLADLIEQHGEELAQLETLCSGKSI- 92 (477)
T ss_pred eCCCCCCEEEEEcCCC------HHHHHHHHHHHHHHhHhhhccCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHhcCCCH-
Confidence 3466788889987777 88999999999999985 999999999999999999999999999998877765432
Q ss_pred hchhhHHHHHhhcChhHHHHHHHHHHHHhccccc-cccccccc-c--cCCCeeEEEEeeeeeeEEEEcCCC-ch-hHHHH
Q 006484 347 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRT-E--LADGLILEKTSCPLGVLLIVFESR-PD-ALVQI 420 (643)
Q Consensus 347 ~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g~~~~~~-~--~~~~~~~~~~~~PlGvv~~I~p~~-P~-~~~~~ 420 (643)
.++.. .++..+++.+++++++.+. .++..... . ...+...+++|+|+|||++|+||| |. +.+++
T Consensus 93 ---~~a~~-------~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 162 (477)
T cd07113 93 ---HLSRA-------FEVGQSANFLRYFAGWATKINGETLAPSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIAVWK 162 (477)
T ss_pred ---HHHHH-------HHHHHHHHHHHHHHHHHHHhcCcccccccccccCCCceEEEEEeecceEEEEcCCChHHHHHHHH
Confidence 12211 1455556666655543321 12221110 0 011234567899999999999994 85 57799
Q ss_pred HHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecCcchHhHhhhCCCCccEEEeecCHHHHHHHHH
Q 006484 421 ASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKE 499 (643)
Q Consensus 421 ~~~AlaaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~ 499 (643)
++|||++||+||+|||+.||.|+.++++++.+ + ||+|++|+|++...+++.|..||+||+|+||||+.+|+.|++
T Consensus 163 i~~ALaaGN~VvlKPs~~tp~~~~~l~~~~~~----aglP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~ 238 (477)
T cd07113 163 IGAALATGCTIVIKPSEFTPLTLLRVAELAKE----AGIPDGVLNVVNGKGAVGAQLISHPDVAKVSFTGSVATGKKIGR 238 (477)
T ss_pred HHHHHHcCCEEEEECCCCCcHHHHHHHHHHHH----cCcCCCcEEEEecCchHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 99999999999999999999999999999987 7 999999999953337777778999999999999999999988
Q ss_pred hc---CCCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC----
Q 006484 500 ST---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV---- 571 (643)
Q Consensus 500 ~a---~~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~---- 571 (643)
.+ .+|+++|||||||+||++|||+|.|++.+++|+|.|+| +|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 239 ~aa~~~~~~~lElGGkn~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~ 317 (477)
T cd07113 239 QAASDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHRSKF-DELVTKLKQALSSFQVGSPM 317 (477)
T ss_pred HHHhhcCceEeecCCCCeeEECCCCCHHHHHHHHHHHHHhhCCCCCcCCcEEEECHHHH-HHHHHHHHHHHHhCCCCCCC
Confidence 76 39999999999999999999999999999999999998 999999999999999 7999999999877532
Q ss_pred ------------------------------EE-ecCccc--cccc--c-C-----CCCccccccccCceEEEEEeCCHHH
Q 006484 572 ------------------------------GL-FGGPRA--SKLL--Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 610 (643)
Q Consensus 572 ------------------------------~~-~g~~~~--~~~~--p-v-----~~~~~~~eE~FgPvl~v~~~~~~de 610 (643)
++ +|+... .++| | | ++|++++||+||||++|++|+|+||
T Consensus 318 ~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~de 397 (477)
T cd07113 318 DESVMFGPLANQPHFDKVCSYLDDARAEGDEIVRGGEALAGEGYFVQPTLVLARSADSRLMREETFGPVVSFVPYEDEEE 397 (477)
T ss_pred CCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeEeCEEEecCCCCChHHhCCCCCCeEEEEEeCCHHH
Confidence 22 244321 2333 5 2 3589999999999999999999999
Q ss_pred HHHHHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 611 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 611 Ai~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
||+++|+++|||++||||+|.++++++++++++
T Consensus 398 ai~~~n~~~~gL~a~v~t~d~~~~~~~~~~l~~ 430 (477)
T cd07113 398 LIQLINDTPFGLTASVWTNNLSKALRYIPRIEA 430 (477)
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhCCc
Confidence 999999999999999999999999999999875
No 21
>PLN02466 aldehyde dehydrogenase family 2 member
Probab=100.00 E-value=1.9e-64 Score=560.12 Aligned_cols=350 Identities=17% Similarity=0.176 Sum_probs=293.3
Q ss_pred HHHcCCceeeEEecCccccccHHhHHHHHHHHHHHHHH--HhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Q 006484 269 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRR--LQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 346 (643)
Q Consensus 269 ~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~--w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~ 346 (643)
++.+|+.++++...+ .+++++++++|++||+. |++++.++|.++|++++++|++|.++|+++++.|.+++.
T Consensus 79 ~P~tg~~i~~v~~~~------~~dv~~Av~aA~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~GK~~- 151 (538)
T PLN02466 79 DPRTGEVIAHVAEGD------AEDVNRAVAAARKAFDEGPWPKMTAYERSRILLRFADLLEKHNDELAALETWDNGKPY- 151 (538)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHcCcCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH-
Confidence 356788889987777 88999999999999984 999999999999999999999999999999887765432
Q ss_pred hchhhHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCeeEEEEeeeeeeEEEEcCCC-ch-hHHHHHHH
Q 006484 347 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFESR-PD-ALVQIASL 423 (643)
Q Consensus 347 ~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~~-P~-~~~~~~~~ 423 (643)
.++. ..++..+++.+++++.+.+. .|...+. ..+...+++++|+|||++|+||| |. +.+++++|
T Consensus 152 ---~~a~-------~~Ev~~~~~~l~~~a~~~~~~~g~~~~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~l~~~~i~p 218 (538)
T PLN02466 152 ---EQSA-------KAELPMFARLFRYYAGWADKIHGLTVPA---DGPHHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGP 218 (538)
T ss_pred ---HHHH-------HHHHHHHHHHHHHHHHHHHHhcCccccc---CCCceEEEEEecceEEEEECCCchHHHHHHHHHhH
Confidence 1221 12556666666766544322 2322221 12234578899999999999995 85 56799999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHHhc
Q 006484 424 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 501 (643)
Q Consensus 424 AlaaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a 501 (643)
||++||+||+|||+.||.+++++++++.+ + ||+|++|+|++ +.++++.|..||+||+|+||||+.+|+.|++.+
T Consensus 219 ALaaGN~VVlKPs~~tp~~~~~l~~ll~e----aGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~FTGS~~~G~~v~~~a 294 (538)
T PLN02466 219 ALACGNTIVLKTAEQTPLSALYAAKLLHE----AGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIVLELA 294 (538)
T ss_pred HHHcCCEEEeECCCCCcHHHHHHHHHHHh----cCCCcccEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHH
Confidence 99999999999999999999999999987 7 99999999995 556788888899999999999999999998766
Q ss_pred C----CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC-----
Q 006484 502 K----IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV----- 571 (643)
Q Consensus 502 ~----~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~----- 571 (643)
+ ||+++|||||||+||++|||+|.|++.+++++|.|+| .|++++|+|||+++| |+|+++|++++.++.+
T Consensus 295 a~~~l~pv~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~vG~p~~ 373 (538)
T PLN02466 295 AKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVY-DEFVEKAKARALKRVVGDPFK 373 (538)
T ss_pred HhcCCCcEEEEcCCCCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCcCcEEEEcHHHH-HHHHHHHHHHHHhccCCCCcc
Confidence 3 7999999999999999999999999999999999998 999999999999999 7999999987665421
Q ss_pred -----------------------------EE-ecCccc--cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHH
Q 006484 572 -----------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAA 611 (643)
Q Consensus 572 -----------------------------~~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~deA 611 (643)
++ +|+... .+ ++ | | ++|++++||+||||++|++|+|+|||
T Consensus 374 ~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~g~~i~Ptvl~~v~~d~~i~~eE~FGPVl~v~~~~d~deA 453 (538)
T PLN02466 374 KGVEQGPQIDSEQFEKILRYIKSGVESGATLECGGDRFGSKGYYIQPTVFSNVQDDMLIAQDEIFGPVQSILKFKDLDEV 453 (538)
T ss_pred CCCCCccCCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCceEEEEEEEecCCCCCchhcCCccCcEEEEEEeCCHHHH
Confidence 11 233221 12 23 5 2 35899999999999999999999999
Q ss_pred HHHHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 612 IDHIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 612 i~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
|+++|+++|||++||||+|.+++.+|++++++
T Consensus 454 i~~aN~~~~GL~a~VfT~d~~~a~~~~~~l~a 485 (538)
T PLN02466 454 IRRANNTRYGLAAGVFTQNLDTANTLSRALRV 485 (538)
T ss_pred HHHHhCCCCCceEEEEcCCHHHHHHHHHhCCe
Confidence 99999999999999999999999999999874
No 22
>TIGR01780 SSADH succinate-semialdehyde dehydrogenase. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070).
Probab=100.00 E-value=3.4e-64 Score=551.32 Aligned_cols=350 Identities=15% Similarity=0.169 Sum_probs=295.4
Q ss_pred HHHcCCceeeEEecCccccccHHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhc
Q 006484 269 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 348 (643)
Q Consensus 269 ~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~g 348 (643)
+|.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|+++.++|+.++..|.+++.
T Consensus 3 ~P~tg~~i~~~~~~~------~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~--- 73 (448)
T TIGR01780 3 NPATGEIIGTVPDQG------VEEAEAAIRAAYEAFKTWKNTTAKERSSLLRKWYNLMMENKDDLARLITLENGKPL--- 73 (448)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH---
Confidence 456788899988887 88999999999999999999999999999999999999999999998877665432
Q ss_pred hhhHHHHHhhcChhHHHHHHHHHHHHhcccc-cccccccccccCCCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHHHHHH
Q 006484 349 YAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAI 425 (643)
Q Consensus 349 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~~Al 425 (643)
.++ ..++..+++.+++++...+ ..+...+. ...+...+.+++|+|||++|+|| ||. +.+++++|||
T Consensus 74 -~~a--------~~ev~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL 142 (448)
T TIGR01780 74 -KEA--------KGEILYAASFLEWFAEEAKRVYGDTIPS--PQSDKRLLVIKQPVGVCAAITPWNFPAAMITRKAGAAL 142 (448)
T ss_pred -HHH--------HHHHHHHHHHHHHHHHHHHHhcCccccC--CCCCceeEEEEeeeeEEEEEcCCChHHHHHHHHHHHHH
Confidence 122 2356666666766654332 22322221 11234556789999999999998 596 4568999999
Q ss_pred HhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecC--cchHhHhhhCCCCccEEEeecCHHHHHHHHHhc-
Q 006484 426 RSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS--REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 501 (643)
Q Consensus 426 aaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~--~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a- 501 (643)
++||+||+|||+.+|+|+.++++++.+ + +|+|++|+|++ +.+.++.|..||+|++|+||||+.+|++|++.+
T Consensus 143 aaGN~VvlKps~~~p~~~~~l~~~~~~----aGlP~gvv~~v~g~~~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~aa 218 (448)
T TIGR01780 143 AAGCTVVVKPAEQTPLSALALARLAEQ----AGIPKGVLNVITGSRAKEVGKVLCTSPLVRKISFTGSTNVGKILMKQSA 218 (448)
T ss_pred HcCCeEeeECCccchHHHHHHHHHHHH----cCCCccceEEEeCCCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh
Confidence 999999999999999999999999987 7 99999999995 356778788899999999999999999999876
Q ss_pred --CCCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC-------
Q 006484 502 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 571 (643)
Q Consensus 502 --~~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~------- 571 (643)
.+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 219 ~~~~~~~lElGGk~~~iV~~dadl~~aa~~iv~~~f~~sGQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~~G~p~~~~ 297 (448)
T TIGR01780 219 STVKKVSMELGGNAPFIVFDDADIDQAVEGAMASKFRNAGQTCVCANRLYVHDGIY-DEFAKKLAEAVKKLKVGNGLDEG 297 (448)
T ss_pred hcCCceEeecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCcccCCceeechHHHH-HHHHHHHHHHHHhcCCCCCCCCC
Confidence 38999999999999999999999999999999999987 999999999999999 7999999999887632
Q ss_pred ---------------------------EE-ecCccc--cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHHHH
Q 006484 572 ---------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAID 613 (643)
Q Consensus 572 ---------------------------~~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~deAi~ 613 (643)
++ +|+... .+ ++ | | ++|++++||+||||++|++|+|+||||+
T Consensus 298 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~il~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~ 377 (448)
T TIGR01780 298 VTQGPLINEKAVEKVEKHIADAVEKGAKVVTGGKRHELGGNFFEPTVLSNVTQDMLVAKEETFGPLAPVFKFDDEEEVIA 377 (448)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeeEcCEEEecCCCCChHhhCCCCCceEEEEEECCHHHHHH
Confidence 11 233221 13 33 5 2 3589999999999999999999999999
Q ss_pred HHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 614 HIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 614 ~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
++|+++|||++||||+|.++++++++++++
T Consensus 378 ~an~~~~gL~~~vfs~d~~~~~~~~~~l~~ 407 (448)
T TIGR01780 378 IANDTEVGLAAYFFSRDLATIWRVAEALEY 407 (448)
T ss_pred HHhCCCcCceEEEECCCHHHHHHHHHhCCc
Confidence 999999999999999999999999999874
No 23
>PRK13252 betaine aldehyde dehydrogenase; Provisional
Probab=100.00 E-value=5.8e-64 Score=554.83 Aligned_cols=351 Identities=17% Similarity=0.201 Sum_probs=295.0
Q ss_pred HHHHcCCceeeEEecCccccccHHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Q 006484 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (643)
Q Consensus 268 ~~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~ 347 (643)
.++.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|++|.++|+++++.|++++.
T Consensus 27 ~nP~tg~~i~~~~~~~------~~dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-- 98 (488)
T PRK13252 27 INPATGEVLATVQAAT------PADVEAAVASAKQGQKIWAAMTAMERSRILRRAVDILRERNDELAALETLDTGKPI-- 98 (488)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCH--
Confidence 3466788899988887 88999999999999999999999999999999999999999999999887765432
Q ss_pred chhhHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCeeEEEEeeeeeeEEEEcCCC-ch-hHHHHHHHH
Q 006484 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFESR-PD-ALVQIASLA 424 (643)
Q Consensus 348 g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~~-P~-~~~~~~~~A 424 (643)
.++.. .++..+++.++++++..+. .|...+. ..+...+++|+|+|||++|+||| |. +.+++++||
T Consensus 99 --~~a~~-------~ev~~~~~~l~~~~~~~~~~~g~~~~~---~~~~~~~~~~~PlGVv~~I~p~N~P~~~~~~~~~~A 166 (488)
T PRK13252 99 --QETSV-------VDIVTGADVLEYYAGLAPALEGEQIPL---RGGSFVYTRREPLGVCAGIGAWNYPIQIACWKSAPA 166 (488)
T ss_pred --HHHHH-------HHHHHHHHHHHHHHHHHHHhcCceecc---CCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHH
Confidence 22211 2445556666666544332 2322211 12345678899999999999995 85 567999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecCcchHhHhhhCCCCccEEEeecCHHHHHHHHHhcC-
Q 006484 425 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK- 502 (643)
Q Consensus 425 laaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a~- 502 (643)
|++||+||+|||+.+|.|+.++++++++ + +|+|++|+|++...+++.|..||+||+|+||||+++|+.|++++.
T Consensus 167 LaaGN~Vv~Kps~~~p~t~~~l~~~~~~----aglP~g~v~~v~g~~~~~~~L~~~~~vd~V~fTGS~~~g~~i~~~aa~ 242 (488)
T PRK13252 167 LAAGNAMIFKPSEVTPLTALKLAEIYTE----AGLPDGVFNVVQGDGRVGAWLTEHPDIAKVSFTGGVPTGKKVMAAAAA 242 (488)
T ss_pred HhcCCeEEEeCCccCcHHHHHHHHHHHH----cCcCcccEEEEecCcHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh
Confidence 9999999999999999999999999987 7 999999999964347788888999999999999999999988773
Q ss_pred --CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC--------
Q 006484 503 --IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 571 (643)
Q Consensus 503 --~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~-------- 571 (643)
+|+++|||||||+||++|||+|.|++.+++++|.|+| +|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 243 ~l~~~~lElgG~~p~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~~~ 321 (488)
T PRK13252 243 SLKEVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKSIK-AAFEARLLERVERIRIGDPMDPAT 321 (488)
T ss_pred cCCcEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHH-HHHHHHHHHHHHhcCCCCCCCCCC
Confidence 8999999999999999999999999999999999988 999999999999999 7999999999886521
Q ss_pred --------------------------EE-ecCccc------cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHH
Q 006484 572 --------------------------GL-FGGPRA------SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 610 (643)
Q Consensus 572 --------------------------~~-~g~~~~------~~-~~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~de 610 (643)
++ +|+... .+ ++ | | +++++++||+||||++|++|+|+||
T Consensus 322 ~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~~e 401 (488)
T PRK13252 322 NFGPLVSFAHRDKVLGYIEKGKAEGARLLCGGERLTEGGFANGAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTFDDEDE 401 (488)
T ss_pred cccccCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCeEEccEEeccCCCCChHhhCCCCCceEEEEeeCCHHH
Confidence 22 233211 13 23 5 2 3578999999999999999999999
Q ss_pred HHHHHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 611 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 611 Ai~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
||+++|+++|||++||||+|.+++.++++++++
T Consensus 402 ai~~~n~~~~gL~a~I~t~d~~~~~~~~~~l~~ 434 (488)
T PRK13252 402 VIARANDTEYGLAAGVFTADLSRAHRVIHQLEA 434 (488)
T ss_pred HHHHHhCCCCCCeEEEEeCCHHHHHHHHHhcCc
Confidence 999999999999999999999999999999875
No 24
>cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1. Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.
Probab=100.00 E-value=7e-64 Score=549.50 Aligned_cols=355 Identities=19% Similarity=0.203 Sum_probs=290.0
Q ss_pred HHHcCCceeeEEecCccccccHHhHHHHHHHHHHHHHH-HhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Q 006484 269 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRR-LQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (643)
Q Consensus 269 ~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~-w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~ 347 (643)
++.+|+.++++...+ .+++++++++|++||+. |+.+|.++|.++|++++++|+++.++|+++++.|++++.
T Consensus 5 ~P~t~~~i~~~~~~~------~~~v~~av~~A~~a~~~~~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-- 76 (455)
T cd07148 5 NPFDLKPIGEVPTVD------WAAIDKALDTAHALFLDRNNWLPAHERIAILERLADLMEERADELALLIAREGGKPL-- 76 (455)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH--
Confidence 467888889988888 89999999999999998 467999999999999999999999999998887765432
Q ss_pred chhhHHHHHhhcChhHHHHHHHHHHHHhcccccccccccccccCCCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHHHHHH
Q 006484 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAI 425 (643)
Q Consensus 348 g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~~Al 425 (643)
.++.. ++......++++++.++.+.+...+.+.. ....+...++.|+|+|||++|+|| ||. +.++++++||
T Consensus 77 --~~a~~-ev~~~i~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL 149 (455)
T cd07148 77 --VDAKV-EVTRAIDGVELAADELGQLGGREIPMGLT----PASAGRIAFTTREPIGVVVAISAFNHPLNLIVHQVAPAI 149 (455)
T ss_pred --HHHHH-HHHHHHHHHHHHHHHHHHhcCcccccccc----cCCCCceEEEEEecceEEEEECCCCcHHHHHHHHHHHHH
Confidence 22211 11112233444444443332111111100 001234567889999999999998 484 6678999999
Q ss_pred HhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecCcchHhHhhhCCCCccEEEeecCHHHHHHHHHhc--C
Q 006484 426 RSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST--K 502 (643)
Q Consensus 426 aaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a--~ 502 (643)
++||+||+|||+.||.++.++++++++ + ||+|++|+|+++.+.++.|..||+||+|+||||+.+|+.|++.+ .
T Consensus 150 aaGN~VvlKps~~~p~~~~~l~~~~~~----aGlP~gvv~~v~g~~~~~~~L~~~~~v~~v~fTGs~~~G~~i~~~aa~~ 225 (455)
T cd07148 150 AAGCPVIVKPALATPLSCLAFVDLLHE----AGLPEGWCQAVPCENAVAEKLVTDPRVAFFSFIGSARVGWMLRSKLAPG 225 (455)
T ss_pred HcCCEEEeeCCCcccHHHHHHHHHHHH----cCCCcCcEEEEeCChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhcC
Confidence 999999999999999999999999987 7 99999999995445677787899999999999999999998876 3
Q ss_pred CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC----------
Q 006484 503 IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV---------- 571 (643)
Q Consensus 503 ~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~---------- 571 (643)
+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|++|+|||+++| |+|+++|+++++++++
T Consensus 226 ~~~~lElGG~~p~iV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~~~~~ 304 (455)
T cd07148 226 TRCALEHGGAAPVIVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIA-DDFAQRLAAAAEKLVVGDPTDPDTEV 304 (455)
T ss_pred CcEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCccCCeEEEEcHhHH-HHHHHHHHHHHhcCCCCCCCCCCCcC
Confidence 8999999999999999999999999999999999988 999999999999999 7999999999887632
Q ss_pred ------------------------EE-ecCccccc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHHcc
Q 006484 572 ------------------------GL-FGGPRASK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQH 618 (643)
Q Consensus 572 ------------------------~~-~g~~~~~~-~~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~deAi~~aN~~ 618 (643)
++ +|+....+ ++ | | +++++++||+||||++|++|+|+||||+++|++
T Consensus 305 gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~ 384 (455)
T cd07148 305 GPLIRPREVDRVEEWVNEAVAAGARLLCGGKRLSDTTYAPTVLLDPPRDAKVSTQEIFGPVVCVYSYDDLDEAIAQANSL 384 (455)
T ss_pred CCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCeEcCEEEeCCCCCCHHHhCCCcCCeEEEEecCCHHHHHHHHhCC
Confidence 11 23322222 22 5 2 357899999999999999999999999999999
Q ss_pred CCCceeEEEecCHHHHHHHHHhcCC
Q 006484 619 GSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 619 ~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
+|||++||||+|.+++.+|++++++
T Consensus 385 ~~gL~a~i~t~d~~~~~~~~~~~~~ 409 (455)
T cd07148 385 PVAFQAAVFTKDLDVALKAVRRLDA 409 (455)
T ss_pred CCCceEEEEcCCHHHHHHHHHHcCc
Confidence 9999999999999999999999874
No 25
>TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase. Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation.
Probab=100.00 E-value=8.6e-64 Score=552.51 Aligned_cols=354 Identities=17% Similarity=0.211 Sum_probs=294.6
Q ss_pred HHHHcCCceeeEEecCccccccHHhHHHHHHHHHHHHHH-HhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Q 006484 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRR-LQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 346 (643)
Q Consensus 268 ~~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~-w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~ 346 (643)
.++.+|+.++++...+ .+++++++++|++||+. |+++|.++|.++|++++++|++|.++|+++++.|++++..
T Consensus 19 ~~P~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 92 (481)
T TIGR03216 19 INPVDGRVIARVHEAG------AAEVDAAVAAARAALKGPWGKMTVAERADLLYAVADEIERRFDDFLAAEVADTGKPRS 92 (481)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHhHhhHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHH
Confidence 4567888899988777 88999999999999997 9999999999999999999999999999998877754421
Q ss_pred hchhhHHHHHhhcChhHHHHHHHHHHHHhccccc-cccccccc-ccCCCeeEEEEeeeeeeEEEEcCCC-ch-hHHHHHH
Q 006484 347 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRT-ELADGLILEKTSCPLGVLLIVFESR-PD-ALVQIAS 422 (643)
Q Consensus 347 ~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g~~~~~~-~~~~~~~~~~~~~PlGvv~~I~p~~-P~-~~~~~~~ 422 (643)
++. ..++..+++.++++++..+. .+...... ....+...+.+|+|+|||++|+||| |. +.+++++
T Consensus 93 ----~~~-------~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~Pl~~~~~~~~ 161 (481)
T TIGR03216 93 ----LAS-------HLDIPRGAANFRVFADVVKNAPTECFEMATPDGKGALNYAVRKPLGVVGVISPWNLPLLLMTWKVG 161 (481)
T ss_pred ----HHh-------HHHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEeccceEEEECCCCcHHHHHHHHHH
Confidence 111 12444555555555443221 12111100 0011334567899999999999994 85 5679999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecC-c-chHhHhhhCCCCccEEEeecCHHHHHHHHH
Q 006484 423 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-R-EEIPDLLKLDDVIDLVIPRGSNKLVSQIKE 499 (643)
Q Consensus 423 ~AlaaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~-~-~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~ 499 (643)
|||++||+||+|||+.||.|+.++++++.+ + ||+|++|+|+| + ++++++|..||+||+|+||||+.+|+.|++
T Consensus 162 ~ALaaGN~vvlKPs~~tp~t~~~l~~l~~~----aglP~g~~~~v~g~~~~~~~~~l~~~~~vd~v~fTGS~~~G~~i~~ 237 (481)
T TIGR03216 162 PALACGNTVVVKPSEETPGTATLLGEVMNA----VGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAIMK 237 (481)
T ss_pred HHHHcCCEEEEECCccchHHHHHHHHHHHH----cCCCcCceEEEecCChhHHHHHHhcCCCCCEEEEECCHHHHHHHHH
Confidence 999999999999999999999999999987 7 99999999995 4 357888889999999999999999999998
Q ss_pred hc---CCCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC----
Q 006484 500 ST---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV---- 571 (643)
Q Consensus 500 ~a---~~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~---- 571 (643)
.+ .+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|++++|+|||+++| |+|+++|+++++++++
T Consensus 238 ~aa~~~~~~~lElgG~n~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~~~~g~p~ 316 (481)
T TIGR03216 238 AAADGVKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYVERPIF-DRFVAALKARAESLKIGVPD 316 (481)
T ss_pred HHhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHH-HHHHHHHHHHHHhcCCCCCC
Confidence 77 38999999999999999999999999999999999988 999999999999999 7999999999987632
Q ss_pred ------------------------------EE-ecCccc-------ccc-c-c-C-----CCCccccccccCceEEEEEe
Q 006484 572 ------------------------------GL-FGGPRA-------SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIV 605 (643)
Q Consensus 572 ------------------------------~~-~g~~~~-------~~~-~-p-v-----~~~~~~~eE~FgPvl~v~~~ 605 (643)
++ +|+... .++ + | | ++|++++||+||||++|++|
T Consensus 317 ~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FgPvl~V~~~ 396 (481)
T TIGR03216 317 DPATNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGVPDFGDALAGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAPF 396 (481)
T ss_pred CCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcccccccCCCCceEccEEEeCCCCCCHHHhCCCCCceEEEEEe
Confidence 11 233211 233 3 5 2 35899999999999999999
Q ss_pred CCHHHHHHHHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 606 DDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 606 ~~~deAi~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
+|+||||+++|+++|||++||||+|.+++++|++++++
T Consensus 397 ~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~ 434 (481)
T TIGR03216 397 DSEEEVIALANDTPYGLAASVWTEDLSRAHRVARQMEV 434 (481)
T ss_pred CCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhcCc
Confidence 99999999999999999999999999999999999875
No 26
>cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like. Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences.
Probab=100.00 E-value=9e-64 Score=551.31 Aligned_cols=351 Identities=19% Similarity=0.179 Sum_probs=295.9
Q ss_pred HHHHcCCceeeEEecCccccccHHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Q 006484 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (643)
Q Consensus 268 ~~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~ 347 (643)
.+|.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|++|.++|+++++.|.+++
T Consensus 21 ~~P~t~~~~~~~~~~~------~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~--- 91 (480)
T cd07559 21 YNPVNGKVLCEIPRST------AEDVDLAVDAAHEAFKTWGKTSVAERANILNKIADRIEENLELLAVAETLDNGKP--- 91 (480)
T ss_pred eCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCC---
Confidence 3466788889888777 8899999999999999999999999999999999999999999999888776443
Q ss_pred chhhHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCeeEEEEeeeeeeEEEEcCCC-ch-hHHHHHHHH
Q 006484 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFESR-PD-ALVQIASLA 424 (643)
Q Consensus 348 g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~~-P~-~~~~~~~~A 424 (643)
..++.. .++..+++.++++++..+. .+.... .+.+...++.++|+|||++|+||| |. +.+++++||
T Consensus 92 -~~~a~~-------~ev~~~~~~~~~~a~~~~~~~~~~~~---~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~i~~A 160 (480)
T cd07559 92 -IRETLA-------ADIPLAIDHFRYFAGVIRAQEGSLSE---IDEDTLSYHFHEPLGVVGQIIPWNFPLLMAAWKLAPA 160 (480)
T ss_pred -HHHHHH-------HHHHHHHHHHHHHHHHHHHhcCcccc---CCCCceeEEEEeccceEEEECCCchHHHHHHHHHHHH
Confidence 122221 2566666666666543322 122211 123445678899999999999995 85 567999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccccCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHHhcC-
Q 006484 425 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK- 502 (643)
Q Consensus 425 laaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~alP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a~- 502 (643)
|++||+||+|||+.||.++..+++++.+ ++|+|++|+|++ +.++++.|..||+||+|+||||+.+|++|++.+.
T Consensus 161 LaaGN~VV~KPs~~tp~~~~~l~~l~~~----~lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~ 236 (480)
T cd07559 161 LAAGNTVVLKPASQTPLSILVLMELIGD----LLPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQYAAE 236 (480)
T ss_pred HHcCCEEEEECchhhhHHHHHHHHHHHH----hCCcCeEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc
Confidence 9999999999999999999999999986 499999999995 5567888888999999999999999999998773
Q ss_pred --CCEEEecCccceEEEcCCC-----CHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC---
Q 006484 503 --IPVLGHADGICHVYVDKSA-----NLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV--- 571 (643)
Q Consensus 503 --~p~~lelGG~~p~iV~~dA-----dl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~--- 571 (643)
+|+++|||||||+||++|| |+|.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++++
T Consensus 237 ~~~p~~lElGGk~p~iV~~dA~~~~~Dl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~~G~p 315 (480)
T cd07559 237 NLIPVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQESIY-DEFIERAVERFEAIKVGNP 315 (480)
T ss_pred cCCcEEeccCCCCeEEEcCCccccccCHHHHHHHHHHHHHhhCCCCCCCCeEEEEcHHHH-HHHHHHHHHHHHhCCCCCC
Confidence 8999999999999999999 999999999999999998 999999999999999 7999999999887632
Q ss_pred -------------------------------EE-ecCccc------ccc-c-c-C-----CCCccccccccCceEEEEEe
Q 006484 572 -------------------------------GL-FGGPRA------SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIV 605 (643)
Q Consensus 572 -------------------------------~~-~g~~~~------~~~-~-p-v-----~~~~~~~eE~FgPvl~v~~~ 605 (643)
++ +|+... .++ + | | ++|.+++||+||||++|++|
T Consensus 316 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~ 395 (480)
T cd07559 316 LDPETMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERLTLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVLAVITF 395 (480)
T ss_pred CCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCcEECeEEEeCCCCCCcHHhcCCcCceEEEEee
Confidence 12 233221 132 3 5 2 35789999999999999999
Q ss_pred CCHHHHHHHHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 606 DDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 606 ~~~deAi~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
+|+||||+++|+++|||++||||+|.+++.++++++++
T Consensus 396 ~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~a~~l~~ 433 (480)
T cd07559 396 KDEEEAIAIANDTEYGLGGGVWTRDINRALRVARGIQT 433 (480)
T ss_pred CCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhcCc
Confidence 99999999999999999999999999999999999875
No 27
>cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like. Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD.
Probab=100.00 E-value=1e-63 Score=549.76 Aligned_cols=351 Identities=17% Similarity=0.175 Sum_probs=295.9
Q ss_pred HHHHcCCceeeEEecCccccccHHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Q 006484 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (643)
Q Consensus 268 ~~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~ 347 (643)
.+|.+|+.+|++...+ .+++++++++|++||+.|+++|.++|.++|++++++|++|+++|++++..|++++.
T Consensus 21 ~nP~t~~~i~~~~~~~------~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~-- 92 (475)
T cd07117 21 YNPANGETLSEITDAT------DADVDRAVKAAQEAFKTWRKTTVAERANILNKIADIIDENKELLAMVETLDNGKPI-- 92 (475)
T ss_pred ECCCCCCEEEEEcCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCH--
Confidence 3466788889888887 88999999999999999999999999999999999999999999998876664431
Q ss_pred chhhHHHHHhhcChhHHHHHHHHHHHHhcccc-cccccccccccCCCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHHHHH
Q 006484 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 424 (643)
Q Consensus 348 g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~~A 424 (643)
.++. ..++..+++.+++++.... ..+...+. ..+...+.+|+|+|||++|+|| ||. +++++++||
T Consensus 93 --~~a~-------~~ev~~~i~~l~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~GVV~~I~PwN~Pl~~~~~~i~~A 160 (475)
T cd07117 93 --RETR-------AVDIPLAADHFRYFAGVIRAEEGSANMI---DEDTLSIVLREPIGVVGQIIPWNFPFLMAAWKLAPA 160 (475)
T ss_pred --HHHH-------HHHHHHHHHHHHHHHHHHHHhcCccccc---CCCceeEEEEeecceEEEECCCccHHHHHHHHHHHH
Confidence 2221 1256777777777765432 12222111 1233457889999999999999 485 567999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccccCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHHhc--
Q 006484 425 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 501 (643)
Q Consensus 425 laaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~alP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a-- 501 (643)
|++||+||+|||+.+|.++..+++++.+ +||+|++|+|++ +.++++.|..||+||+|+||||+.+|+.|++.+
T Consensus 161 L~aGN~VvlKPs~~~p~~~~~l~~~~~~----~lP~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~ 236 (475)
T cd07117 161 LAAGNTVVIKPSSTTSLSLLELAKIIQD----VLPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAAAK 236 (475)
T ss_pred HHcCCEEEEECCccCcHHHHHHHHHHHH----hCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc
Confidence 9999999999999999999999999986 499999999995 556777777899999999999999999998876
Q ss_pred -CCCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC--------
Q 006484 502 -KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 571 (643)
Q Consensus 502 -~~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~-------- 571 (643)
.+|+++|||||||+||++|||++.|++.+++|+|.|+| .|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 237 ~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~~g~p~~~~~ 315 (475)
T cd07117 237 KLIPATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIY-DEFVAKLKEKFENVKVGNPLDPDT 315 (475)
T ss_pred cCCcEEEeCCCCCeEEECCCCChHHHHHHHHHHHhhccCCCCCCCeEEEEeHHHH-HHHHHHHHHHHHhccCCCCCCCCC
Confidence 39999999999999999999999999999999999998 999999999999999 7999999999887632
Q ss_pred --------------------------EE-ecCccc------cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHH
Q 006484 572 --------------------------GL-FGGPRA------SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 610 (643)
Q Consensus 572 --------------------------~~-~g~~~~------~~-~~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~de 610 (643)
++ +|+... .+ ++ | | +++++++||+||||++|++|+|+||
T Consensus 316 ~~gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~e 395 (475)
T cd07117 316 QMGAQVNKDQLDKILSYVDIAKEEGAKILTGGHRLTENGLDKGFFIEPTLIVNVTNDMRVAQEEIFGPVATVIKFKTEDE 395 (475)
T ss_pred cccCcCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCeEEeeEEeecCCCCChhhhCCCcCCeEEEEEECCHHH
Confidence 12 233221 13 23 5 2 3578999999999999999999999
Q ss_pred HHHHHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 611 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 611 Ai~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
||+++|+++|||++||||+|.+++.++++++++
T Consensus 396 ai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~ 428 (475)
T cd07117 396 VIDMANDSEYGLGGGVFTKDINRALRVARAVET 428 (475)
T ss_pred HHHHHhCCCcCceEEEECCCHHHHHHHHHhCCc
Confidence 999999999999999999999999999999875
No 28
>cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like. Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD.
Probab=100.00 E-value=1.3e-63 Score=548.29 Aligned_cols=349 Identities=16% Similarity=0.170 Sum_probs=291.4
Q ss_pred HHHcCCceeeEEecCccccccHHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhc
Q 006484 269 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 348 (643)
Q Consensus 269 ~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~g 348 (643)
++.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|+++.++|++++..|++++.
T Consensus 3 ~p~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~--- 73 (456)
T cd07107 3 NPATGQVLARVPAAS------AADVDRAVAAARAAFPEWRATTPLERARMLRELATRLREHAEELALIDALDCGNPV--- 73 (456)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCH---
Confidence 356788889987777 88999999999999999999999999999999999999999999998887765432
Q ss_pred hhhHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHHHHHH
Q 006484 349 YAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAI 425 (643)
Q Consensus 349 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~~Al 425 (643)
.++ ..++..+++.++++++.... .+...+. ..+...+..|+|+|||++|+|| ||. +.+++++|||
T Consensus 74 -~~a--------~~ev~~~~~~l~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~AL 141 (456)
T cd07107 74 -SAM--------LGDVMVAAALLDYFAGLVTELKGETIPV---GGRNLHYTLREPYGVVARIVAFNHPLMFAAAKIAAPL 141 (456)
T ss_pred -HHH--------HHHHHHHHHHHHHHHHHHHHhCCccccC---CCCceEEEEEecceEEEEECCcccHHHHHHHHHhHHH
Confidence 122 23455555555555433221 1222221 1233467889999999999999 585 5678999999
Q ss_pred HhCCEEEEeCCcchHHHHHHHHHHHHHhcccccCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHHhc---
Q 006484 426 RSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST--- 501 (643)
Q Consensus 426 aaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~alP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a--- 501 (643)
++||+||+|||+.+|.++.++++++++ +||+|++|+|++ +.++++.|..||++++|+||||+.+|++|++.+
T Consensus 142 aaGN~VV~Kps~~~p~~~~~l~~~~~~----~lP~gvv~~v~g~~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~~ 217 (456)
T cd07107 142 AAGNTVVVKPPEQAPLSALRLAELARE----VLPPGVFNILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAEG 217 (456)
T ss_pred HcCCEEEEeCCCCChHHHHHHHHHHHH----hCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhcC
Confidence 999999999999999999999999986 499999999995 555677777899999999999999999999877
Q ss_pred CCCEEEecCccceEEEcCCCCHHHHHHHHHhhc-CCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC--------
Q 006484 502 KIPVLGHADGICHVYVDKSANLDVAKNIVIDAK-IDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 571 (643)
Q Consensus 502 ~~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~-~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~-------- 571 (643)
.+|+++|||||||+||++|||+|.|++.+++|+ |.|+| +|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 218 ~~~~~lElgG~~p~iV~~dadl~~Aa~~i~~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~~g~p~~~~~ 296 (456)
T cd07107 218 IKHVTLELGGKNALIVFPDADPEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIY-DEVLARVVERVAAIKVGDPTDPAT 296 (456)
T ss_pred CCeEEEECCCCCeEEECCCCCHHHHHHHHHHhchhhcCCCCCcCCcEEEEcHHHH-HHHHHHHHHHHHhCCCCCCCCCCC
Confidence 489999999999999999999999999999996 88887 999999999999999 7999999999886531
Q ss_pred --------------------------EE-ecCccc------ccc-c-c-C-----CCCccccccccCceEEEEEeCCHHH
Q 006484 572 --------------------------GL-FGGPRA------SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 610 (643)
Q Consensus 572 --------------------------~~-~g~~~~------~~~-~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~de 610 (643)
++ +|+... .++ + | | ++|++++||+||||++|++|+|+||
T Consensus 297 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~i~~~~~~~e 376 (456)
T cd07107 297 TMGPLVSRQQYDRVMHYIDSAKREGARLVTGGGRPEGPALEGGFYVEPTVFADVTPGMRIAREEIFGPVLSVLRWRDEAE 376 (456)
T ss_pred CcCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEECCCCCChhhhCCCCCceEEEEeeCCHHH
Confidence 12 233221 132 3 5 2 3589999999999999999999999
Q ss_pred HHHHHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 611 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 611 Ai~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
||+++|+++|||++||||+|.++++++++++++
T Consensus 377 ai~~~n~~~~gL~a~vft~d~~~~~~~~~~l~~ 409 (456)
T cd07107 377 MVAQANGVEYGLTAAIWTNDISQAHRTARRVEA 409 (456)
T ss_pred HHHHHhCCCCcceEEEECCCHHHHHHHHHhcCc
Confidence 999999999999999999999999999999874
No 29
>cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like. Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde.
Probab=100.00 E-value=8e-64 Score=552.08 Aligned_cols=351 Identities=18% Similarity=0.185 Sum_probs=294.5
Q ss_pred HHHHcCCceeeEEecCccccccHHhHHHHHHHHHHHHHH--HhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Q 006484 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRR--LQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 345 (643)
Q Consensus 268 ~~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~--w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~ 345 (643)
.+|.+|+.++++...+ .+++++++++|++||+. |+++|.++|.++|++++++|++|.++|++++++|++++.
T Consensus 24 ~~P~t~~~i~~v~~~~------~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~ 97 (476)
T cd07142 24 IDPRNGEVIAHVAEGD------AEDVDRAVKAARKAFDEGPWPRMTGYERSRILLRFADLLEKHADELAALETWDNGKPY 97 (476)
T ss_pred ECCCCCCEEEEEcCCC------HHHHHHHHHHHHHhcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCH
Confidence 3466788899988777 89999999999999975 999999999999999999999999999999887765432
Q ss_pred HhchhhHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHHH
Q 006484 346 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 422 (643)
Q Consensus 346 ~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~ 422 (643)
. ++. ..++..+++.+++++.+.+. .|...+. ..+...+++|+|+|||++|+|| ||. +.+++++
T Consensus 98 ~----~a~-------~~ev~~~~~~l~~~a~~~~~~~g~~~~~---~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~i~ 163 (476)
T cd07142 98 E----QAR-------YAEVPLAARLFRYYAGWADKIHGMTLPA---DGPHHVYTLHEPIGVVGQIIPWNFPLLMFAWKVG 163 (476)
T ss_pred H----HHH-------HHHHHHHHHHHHHHHHHHHHhcCccccc---CCCceEEEEEeceeeEEEECCCccHHHHHHHHHH
Confidence 1 211 12455666666666654432 2332221 1223457889999999999998 586 4679999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHHh
Q 006484 423 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 500 (643)
Q Consensus 423 ~AlaaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~ 500 (643)
|||++||+||+|||+.||.++.++++++.+ + ||+|++|+|++ +.++++.|..||+||+|+||||+.+|+.|++.
T Consensus 164 ~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~----aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~G~~v~~~ 239 (476)
T cd07142 164 PALACGNTIVLKPAEQTPLSALLAAKLAAE----AGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKIIMQL 239 (476)
T ss_pred HHHHcCCEEEEECCCcccHHHHHHHHHHHH----cCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence 999999999999999999999999999987 7 99999999995 55578888889999999999999999999986
Q ss_pred cC----CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC----
Q 006484 501 TK----IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV---- 571 (643)
Q Consensus 501 a~----~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~---- 571 (643)
++ +|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 240 aa~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~G~p~ 318 (476)
T cd07142 240 AAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHESIY-DEFVEKAKARALKRVVGDPF 318 (476)
T ss_pred HHHcCCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEEEeHHHH-HHHHHHHHHHHHhcCCCCCC
Confidence 63 7999999999999999999999999999999999988 999999999999999 7999999988876421
Q ss_pred ------------------------------EE-ecCccc--cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHH
Q 006484 572 ------------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 610 (643)
Q Consensus 572 ------------------------------~~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~de 610 (643)
++ +|+... .+ ++ | | +++++++||+||||++|++|+|+||
T Consensus 319 ~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~e 398 (476)
T cd07142 319 RKGVEQGPQVDKEQFEKILSYIEHGKEEGATLITGGDRIGSKGYYIQPTIFSDVKDDMKIARDEIFGPVQSILKFKTVDE 398 (476)
T ss_pred CCCCcCCcCcCHHHHHHHHHHHHHHHhCCCEEEecCCcCCCCCeeEccEEeecCCCCChhhhCCccCceEEEEeeCCHHH
Confidence 22 233221 12 23 5 2 3578999999999999999999999
Q ss_pred HHHHHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 611 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 611 Ai~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
||+++|+++|||++||||+|.+++.++++++++
T Consensus 399 ai~~~n~~~~gL~a~vft~d~~~a~~~~~~l~~ 431 (476)
T cd07142 399 VIKRANNSKYGLAAGVFSKNIDTANTLSRALKA 431 (476)
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhCCc
Confidence 999999999999999999999999999999875
No 30
>cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like. Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source.
Probab=100.00 E-value=6.1e-64 Score=542.51 Aligned_cols=330 Identities=16% Similarity=0.186 Sum_probs=269.5
Q ss_pred HhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhhHHHHHhhcChhHHHHHHHH
Q 006484 291 VGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKS 370 (643)
Q Consensus 291 ~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~ 370 (643)
+++++++++|++||+.|+++|.++|.++|++++++|++|.++|++++++|++++. .++.. ..
T Consensus 4 ~~v~~av~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~----~~~~~--------------~~ 65 (429)
T cd07121 4 ATVDDAVAAAKAAQKQYRKCTLADREKIIEAIREALLSNAEELAEMAVEETGMGR----VEDKI--------------AK 65 (429)
T ss_pred hhHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH----HHHHH--------------HH
Confidence 5899999999999999999999999999999999999999999999877665432 11211 11
Q ss_pred HHHHhccccccccc-c-cccccCCCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHH
Q 006484 371 IRILADMEEPIGQI-L-KRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAIL 446 (643)
Q Consensus 371 ~~~~~~~~~~~g~~-~-~~~~~~~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~~AlaaGN~vi~Kps~~tp~t~~~~ 446 (643)
++++++.. .+.. . +......+...+++|+|+|||++|+|| ||. +.++++++||++||+||+||||.||.|+.++
T Consensus 66 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKpse~tp~t~~~l 143 (429)
T cd07121 66 NHLAAEKT--PGTEDLTTTAWSGDNGLTLVEYAPFGVIGAITPSTNPTETIINNSISMLAAGNAVVFNPHPGAKKVSAYA 143 (429)
T ss_pred HHHHHHhc--CcccccccccccCCCcceEEEEcccceEEEEccCCCchhHHHHHHHHHHHcCCCEEEECCccchhHHHHH
Confidence 22221100 0110 0 000001112346778999999999999 595 5678999999999999999999999999999
Q ss_pred HHHHHHhcccc-cCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHHhcCCCEEEecCccceEEEcCCCCHH
Q 006484 447 HKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLD 524 (643)
Q Consensus 447 ~~l~~~a~~~a-lP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a~~p~~lelGG~~p~iV~~dAdl~ 524 (643)
++++++++.++ +|+|++|+|++ +.++++.|..||+||+|+||||+.+|+.|++. .+|+++|||||||+||++|||+|
T Consensus 144 ~~l~~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~I~fTGs~~~g~~v~~~-~k~~~lelGGk~p~iV~~dADld 222 (429)
T cd07121 144 VELINKAIAEAGGPDNLVVTVEEPTIETTNELMAHPDINLLVVTGGPAVVKAALSS-GKKAIGAGAGNPPVVVDETADIE 222 (429)
T ss_pred HHHHHHHHHHcCCCcceEEEecCCChHHHHHHHcCCCccEEEeeCCHHHHHHHHhC-CCceEeecCCCceEEEecCCCHH
Confidence 99999888888 99999999995 44567777789999999999999999999876 59999999999999999999999
Q ss_pred HHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHc----------------------CCEE-ecCcc--
Q 006484 525 VAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHE----------------------GVGL-FGGPR-- 578 (643)
Q Consensus 525 ~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~----------------------~~~~-~g~~~-- 578 (643)
+|++.+++|+|.|+| +|+|++|+|||++|| |+|+++|+++ ..+ |.++ .|+..
T Consensus 223 ~Aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~-d~f~~~L~~~-~~~~i~~~~~~~v~~~i~~a~~~~~ga~~~~gg~~~~ 300 (429)
T cd07121 223 KAARDIVQGASFDNNLPCIAEKEVIAVDSVA-DYLIAAMQRN-GAYVLNDEQAEQLLEVVLLTNKGATPNKKWVGKDASK 300 (429)
T ss_pred HHHHHHHhcccccCCCCCCccceEEEeHHHH-HHHHHHHHHC-CCEEcCHHHHHHHHHhhcccCCCccccccccCcCHHH
Confidence 999999999999988 999999999999999 7999999875 111 1111 12211
Q ss_pred --c-cccc-----c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHHccCCCc--eeEEEecCHHHHHHHHHhcC
Q 006484 579 --A-SKLL-----Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAH--TDCIVAEDQKVAETFLCQVD 642 (643)
Q Consensus 579 --~-~~~~-----p-v-----~~~~~~~eE~FgPvl~v~~~~~~deAi~~aN~~~~GL--~a~v~t~d~~~~~~~~~~l~ 642 (643)
. .+++ | | ++|++++||+||||++|++|+|+||||+++|+++||| ++||||+|.+++++|+++++
T Consensus 301 ~~~~~G~~~~~~~ptil~~v~~~~~i~~eE~FgPVl~v~~~~~~~eAi~~an~~~~GLghsa~I~t~d~~~a~~~a~~l~ 380 (429)
T cd07121 301 ILKAAGIEVPADIRLIIVETDKDHPFVVEEQMMPILPVVRVKNFDEAIELAVELEHGNRHTAIIHSKNVENLTKMARAMQ 380 (429)
T ss_pred HHHHcCCCCCCCCeEEEEecCCCCCccccccccceEEEEEeCCHHHHHHHHHhhccCCCceEEEecCCHHHHHHHHhhCC
Confidence 0 1222 3 2 3589999999999999999999999999999999999 99999999999999999987
Q ss_pred C
Q 006484 643 R 643 (643)
Q Consensus 643 ~ 643 (643)
+
T Consensus 381 a 381 (429)
T cd07121 381 T 381 (429)
T ss_pred c
Confidence 5
No 31
>cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids.
Probab=100.00 E-value=1.1e-63 Score=549.73 Aligned_cols=354 Identities=15% Similarity=0.187 Sum_probs=293.8
Q ss_pred HHHHcCCceeeEEecCccccccHHhHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Q 006484 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSR--RLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 345 (643)
Q Consensus 268 ~~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~ 345 (643)
.+|.+|+.++++...+ .+++++++++|++||+ .|+++|.++|.++|++++++|++|.++|+++++.|.+++.
T Consensus 26 ~nP~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 99 (486)
T cd07140 26 INPTDGSVICKVSLAT------VEDVDRAVAAAKEAFENGEWGKMNARDRGRLMYRLADLMEEHQEELATIESLDSGAVY 99 (486)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHhcCCCchhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcH
Confidence 4467788889888887 8899999999999998 5999999999999999999999999999998877665432
Q ss_pred HhchhhHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccc-cCCCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHH
Q 006484 346 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTE-LADGLILEKTSCPLGVLLIVFES-RPD-ALVQIA 421 (643)
Q Consensus 346 ~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g~~~~~~~-~~~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~ 421 (643)
.++.. .++...++.+++++.+.+. .|...+... .+.+...+++|+|+|||++|+|| ||. +.++++
T Consensus 100 ----~~a~~-------~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~r~P~GVv~~I~PwN~P~~~~~~~i 168 (486)
T cd07140 100 ----TLALK-------THVGMSIQTFRYFAGWCDKIQGKTIPINQARPNRNLTLTKREPIGVCGIVIPWNYPLMMLAWKM 168 (486)
T ss_pred ----HHHHH-------HHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEeeccceEEEEcCCchHHHHHHHHH
Confidence 12211 2455555556655543321 122221110 11223356789999999999998 586 578999
Q ss_pred HHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHH
Q 006484 422 SLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKE 499 (643)
Q Consensus 422 ~~AlaaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~ 499 (643)
+|||++||+||+|||+.||.++..+++++.+ + ||+|++|+|++ +.++++.|..||+|++|+||||+.+|+.|++
T Consensus 169 ~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~----aglP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 244 (486)
T cd07140 169 AACLAAGNTVVLKPAQVTPLTALKFAELTVK----AGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGKHIMK 244 (486)
T ss_pred HHHHHhCCEEEEECCccCcHHHHHHHHHHHH----cCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 9999999999999999999999999999987 7 99999999995 5567888888999999999999999999988
Q ss_pred hcC----CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC---
Q 006484 500 STK----IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV--- 571 (643)
Q Consensus 500 ~a~----~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~--- 571 (643)
.+. +|+++|||||||+||++|||+|.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++.+
T Consensus 245 ~aa~~~l~~v~lElGGk~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rl~V~~~i~-~~f~~~l~~~~~~l~~g~p 323 (486)
T cd07140 245 SCAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVEESIH-DEFVRRVVEEVKKMKIGDP 323 (486)
T ss_pred HHHhcCCCeEEEEcCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHH-HHHHHHHHHHHHhCCccCC
Confidence 763 7999999999999999999999999999999999988 999999999999999 7999999999987632
Q ss_pred -------------------------------EE-ecCccc--cc-cc-c-C-----CCCccccccccCceEEEEEeC--C
Q 006484 572 -------------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVD--D 607 (643)
Q Consensus 572 -------------------------------~~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FgPvl~v~~~~--~ 607 (643)
++ +|+... .+ ++ | | ++|.+++||+||||++|++|+ |
T Consensus 324 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~ 403 (486)
T cd07140 324 LDRSTDHGPQNHKAHLDKLVEYCERGVKEGATLVYGGKQVDRPGFFFEPTVFTDVEDHMFIAKEESFGPIMIISKFDDGD 403 (486)
T ss_pred CCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeECCEEEeCCCCCChhhhCCCCCCeEEEEEcCCCC
Confidence 12 233221 23 33 5 2 358999999999999999998 6
Q ss_pred HHHHHHHHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 608 VRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 608 ~deAi~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
++|||+++|+++|||++||||+|.++++++++++++
T Consensus 404 ~~eai~~aN~~~~gL~a~vft~d~~~a~~~~~~l~~ 439 (486)
T cd07140 404 VDGVLQRANDTEYGLASGVFTKDINKALYVSDKLEA 439 (486)
T ss_pred HHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCc
Confidence 999999999999999999999999999999999875
No 32
>cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins. Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway.
Probab=100.00 E-value=1.5e-63 Score=539.16 Aligned_cols=332 Identities=16% Similarity=0.201 Sum_probs=270.1
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhhHHHHHhhcChhHHHHHHH--H
Q 006484 293 AREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAK--S 370 (643)
Q Consensus 293 v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~--~ 370 (643)
+++++++|++||+.|+++|+.+|.++|++++++|++|+++|+++++.|++++. .++.. ++..++. .
T Consensus 1 ~~~Ai~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~----~ea~~--------~~~~~~~~~~ 68 (439)
T cd07081 1 LDDAVAAAKVAQQGLSCKSQEMVDLIFRAAAEAAEDARIDLAKLAVSETGMGR----VEDKV--------IKNHFAAEYI 68 (439)
T ss_pred CHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCh----HHHHH--------HHHHHHHHHH
Confidence 36899999999999999999999999999999999999999999888776542 22221 1121221 1
Q ss_pred HHHHhcccccccccccccccCCCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHH
Q 006484 371 IRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHK 448 (643)
Q Consensus 371 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~~AlaaGN~vi~Kps~~tp~t~~~~~~ 448 (643)
.++++.. ..+...+. ..+...+++|+|+|||++|+|| ||. +.+++++|||++||+||+||||+||.++.++++
T Consensus 69 ~~~~~~~--~~~~~~~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~ 143 (439)
T cd07081 69 YNVYKDE--KTCGVLTG---DENGGTLIIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAAT 143 (439)
T ss_pred HHHHhcc--ccCceecC---CCCCceEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCeEEEECCccchHHHHHHHH
Confidence 2333221 11222111 1123457889999999999999 585 567999999999999999999999999999999
Q ss_pred HHHHhcccc-cCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHHhcCCCEEEecCccceEEEcCCCCHHHH
Q 006484 449 VITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVA 526 (643)
Q Consensus 449 l~~~a~~~a-lP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a~~p~~lelGG~~p~iV~~dAdl~~A 526 (643)
++.+++.++ +|+|++|+|++ +.++++.|..||+|++|+||||+.+.+..++ ..||+++|||||||+||++|||+|.|
T Consensus 144 l~~~~l~~aG~P~gvv~~v~g~~~~~g~~L~~~~~V~~V~FTGs~~v~~~aa~-~~k~~~lElGGk~p~IV~~dADl~~A 222 (439)
T cd07081 144 LLLQAAVAAGAPENLIGWIDNPSIELAQRLMKFPGIGLLLATGGPAVVKAAYS-SGKPAIGVGAGNTPVVIDETADIKRA 222 (439)
T ss_pred HHHHHHHHcCCChhhEEEEcCCCHHHHHHHHcCCCCCEEEEECCHHHHHHHHh-cCCCEEEEcCCCCeEEEcCCCCHHHH
Confidence 999988889 99999999995 5567777778999999999999998776543 36899999999999999999999999
Q ss_pred HHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHH-------------------HcCCEEecCcc-----ccc
Q 006484 527 KNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQ-------------------HEGVGLFGGPR-----ASK 581 (643)
Q Consensus 527 ~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~-------------------~~~~~~~g~~~-----~~~ 581 (643)
++.+++|+|.|+| +|+|.+|+|||++|| |+|+++|++++. +.|..+.|+.. ..+
T Consensus 223 a~~iv~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~gg~~~~~~~~~G 301 (439)
T cd07081 223 VQSIVKSKTFDNGVICASEQSVIVVDSVY-DEVMRLFEGQGAYKLTAEELQQVQPVILKNGDVNRDIVGQDAYKIAAAAG 301 (439)
T ss_pred HHHHHHHHhcCCCCCCCCCCEEEEcHHHH-HHHHHHHHHcCCccCCHHHHHHHHHHHHhcCCcCCcccCCCHHHHHHHcC
Confidence 9999999999998 999999999999999 799999987641 01333444321 012
Q ss_pred c-c-c----C-------CCCccccccccCceEEEEEeCCHHHHHHHHHcc----CCCceeEEEecC---HHHHHHHHHhc
Q 006484 582 L-L-Q----I-------PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQH----GSAHTDCIVAED---QKVAETFLCQV 641 (643)
Q Consensus 582 ~-~-p----v-------~~~~~~~eE~FgPvl~v~~~~~~deAi~~aN~~----~~GL~a~v~t~d---~~~~~~~~~~l 641 (643)
+ + | + ++|++++||+||||++|++|+|+||||+++|++ +|||+++|||+| .++++++++++
T Consensus 302 ~~~~pt~~~i~~~~~~~~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~n~~~~GLsa~V~T~d~~~~~~a~~~a~~l 381 (439)
T cd07081 302 LKVPQETRILIGEVTSLAEHEPFAHEKLSPVLAMYRAANFADADAKALALKLEGGCGHTSAMYSDNIKAIENMNQFANAM 381 (439)
T ss_pred CccCCCceEEEEecCCCCCCchhhhCccCceEEEEEcCCHHHHHHHHHHHhhccCCCceEEEECCCcchHHHHHHHHhhC
Confidence 2 1 2 1 458999999999999999999999999999975 899999999999 99999999998
Q ss_pred CC
Q 006484 642 DR 643 (643)
Q Consensus 642 ~~ 643 (643)
++
T Consensus 382 ~~ 383 (439)
T cd07081 382 KT 383 (439)
T ss_pred Cc
Confidence 75
No 33
>cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences.
Probab=100.00 E-value=4.1e-63 Score=541.36 Aligned_cols=352 Identities=16% Similarity=0.179 Sum_probs=294.1
Q ss_pred HHHHcCCceeeEEecCccccccHHhHHHHHHHHHHHHHHH--hcCCHHHH----HHHHHHHHHHHHhC--HHHHHHHHHH
Q 006484 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRL--QALQSQDR----RKILLDVADALEAN--ESLIKVENEA 339 (643)
Q Consensus 268 ~~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w--~~~~~~~R----~~~L~~~a~~l~~~--~~~i~~~~~~ 339 (643)
.+|.+|+.++++...+ .+++++++++|++||+.| +.++..+| .++|+++++.|+++ .++|++++++
T Consensus 17 ~nP~t~~~i~~~~~a~------~~dv~~Av~aA~~A~~~W~~~~~~~~~R~l~~~~il~~~a~~l~~~~~~~~la~~~~~ 90 (489)
T cd07126 17 LDPLNGDKFISVPDTD------EDEINEFVDSLRQCPKSGLHNPLKNPERYLLYGDVSHRVAHELRKPEVEDFFARLIQR 90 (489)
T ss_pred eCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHhccccCCCHHHHhhhHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 4467888899988888 899999999999999998 66779999 89999999999999 4999998887
Q ss_pred HHHHHHHhchhhHHHHHhhcChhHHHHHHHHHHHHhcccc-cccccccccccCCCeeEEEEeeeeeeEEEEcCCC-ch-h
Q 006484 340 DVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFESR-PD-A 416 (643)
Q Consensus 340 ~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~~-P~-~ 416 (643)
|+|++. .++ ..++..+++.+++|++..+ ..|..........+...+++|+|+|||++|+||| |. +
T Consensus 91 e~GK~~----~~a--------~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~v~r~P~GVV~~I~PwNfP~~l 158 (489)
T cd07126 91 VAPKSD----AQA--------LGEVVVTRKFLENFAGDQVRFLARSFNVPGDHQGQQSSGYRWPYGPVAIITPFNFPLEI 158 (489)
T ss_pred HcCCCH----HHH--------HHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCCceeEEEEecceEEEEECCCchHHHH
Confidence 765432 122 3478888999998886543 2233211000112345678999999999999995 85 6
Q ss_pred HHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHH
Q 006484 417 LVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLV 494 (643)
Q Consensus 417 ~~~~~~~AlaaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g 494 (643)
.+++++|||++||+||+||||.||+|+.++++++.+ + ||+|++|+|+| +++.+.++ .|+++|+|+||||+++|
T Consensus 159 ~~~~ia~ALaaGN~VVlKPSe~tp~~~~~l~~~~~~----aGlP~gv~~vv~G~~~~~~~l~-~~~~v~~V~FTGS~~vG 233 (489)
T cd07126 159 PALQLMGALFMGNKPLLKVDSKVSVVMEQFLRLLHL----CGMPATDVDLIHSDGPTMNKIL-LEANPRMTLFTGSSKVA 233 (489)
T ss_pred HHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHH----hCcCcCcEEEEeCCchhHHHHh-cCCCCCEEEEECCHHHH
Confidence 789999999999999999999999999999999987 6 99999999996 45555554 57899999999999999
Q ss_pred HHHHHhcCCCEEEecCccceEEEcCCC-CHHHHHHHHHhhcCCCCC-ccccceeEEEcCc-cCCchhHHHHHHHHHHcC-
Q 006484 495 SQIKESTKIPVLGHADGICHVYVDKSA-NLDVAKNIVIDAKIDYPA-ACNAMETLLVHKD-LACNGALNELVVELQHEG- 570 (643)
Q Consensus 495 ~~i~~~a~~p~~lelGG~~p~iV~~dA-dl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~-i~~~~f~~~l~~~~~~~~- 570 (643)
++|+..+++++.+|+|||||+||++|| |+|.|++.+++|+|.|+| +|+|++|+|||++ +| |+|+++|++.++++.
T Consensus 234 r~i~~~~g~k~~lElgg~~~~IV~~Da~dld~a~~~~~~g~f~naGQ~C~a~~rv~V~~~i~~-d~f~~~l~~~~~~~~~ 312 (489)
T cd07126 234 ERLALELHGKVKLEDAGFDWKILGPDVSDVDYVAWQCDQDAYACSGQKCSAQSILFAHENWVQ-AGILDKLKALAEQRKL 312 (489)
T ss_pred HHHHHHhCCCEEeecCCCCceEECCCcccHHHHHHHHHHHHHhcCCCcCCCCceEEEeCcchH-HHHHHHHHHHHHhccc
Confidence 999988888999999999999999999 999999999999999998 9999999999999 57 699999998876542
Q ss_pred ----------------------------CEE-ecCccc------c--ccc-c-C---C--------CCccccccccCceE
Q 006484 571 ----------------------------VGL-FGGPRA------S--KLL-Q-I---P--------ETRLFHHEYNSMVC 600 (643)
Q Consensus 571 ----------------------------~~~-~g~~~~------~--~~~-p-v---~--------~~~~~~eE~FgPvl 600 (643)
+++ +|+... . +++ | | + +|.+++||+||||+
T Consensus 313 g~~~~Gpli~~~~~~v~~~i~~a~~~~Ga~~l~GG~~~~~~~~~~~~~~~~PTvl~~~~~~~~~~~~~~i~~eEiFGPVl 392 (489)
T cd07126 313 EDLTIGPVLTWTTERILDHVDKLLAIPGAKVLFGGKPLTNHSIPSIYGAYEPTAVFVPLEEIAIEENFELVTTEVFGPFQ 392 (489)
T ss_pred CCCcCCCCcCHHHHHHHHHHHHHHhCCCCEEEeCCcccccccccCCcceecCeEEEeccccccCCCCCHHHhCCCcCCEE
Confidence 222 244321 1 234 5 2 1 46899999999999
Q ss_pred EEEEeCC--HHHHHHHHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 601 TVEIVDD--VRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 601 ~v~~~~~--~deAi~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
+|++|+| +||||+++|+++|||++||||+|.++++++++++++
T Consensus 393 ~V~~~~~~~~deai~~aN~~~~gL~~~vft~d~~~~~~~~~~~~~ 437 (489)
T cd07126 393 VVTEYKDEQLPLVLEALERMHAHLTAAVVSNDIRFLQEVLANTVN 437 (489)
T ss_pred EEEEECCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCc
Confidence 9999999 999999999999999999999999999999999875
No 34
>cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like. Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression.
Probab=100.00 E-value=3.8e-63 Score=547.13 Aligned_cols=350 Identities=18% Similarity=0.163 Sum_probs=292.5
Q ss_pred HHHHcCCceeeEEecCccccccHHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Q 006484 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (643)
Q Consensus 268 ~~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~ 347 (643)
.+|.+|+.++++...+ .+++++++++|++||+.|+++|..+|.++|++++++|++|.++|+.+++.|.+++.
T Consensus 21 ~nP~tg~~i~~~~~~~------~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~-- 92 (479)
T cd07116 21 ITPVTGKVFCEVPRST------AEDIELALDAAHAAKEAWGKTSVAERANILNKIADRMEANLEMLAVAETWDNGKPV-- 92 (479)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH--
Confidence 4567888889988777 88999999999999999999999999999999999999999999998876654321
Q ss_pred chhhHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCeeEEEEeeeeeeEEEEcCCC-ch-hHHHHHHHH
Q 006484 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFESR-PD-ALVQIASLA 424 (643)
Q Consensus 348 g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~~-P~-~~~~~~~~A 424 (643)
.++. ..++..+++.++++++..+. .+...+ ...+...+++++|+|||++|+||| |. +.+++++||
T Consensus 93 --~~a~-------~~ev~~~~~~~~~~a~~~~~~~~~~~~---~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A 160 (479)
T cd07116 93 --RETL-------AADIPLAIDHFRYFAGCIRAQEGSISE---IDENTVAYHFHEPLGVVGQIIPWNFPLLMATWKLAPA 160 (479)
T ss_pred --HHHH-------HHHHHHHHHHHHHHHHhHHHcCCeeec---CCCCceEEEEEeccceEEEECCCchHHHHHHHHHHHH
Confidence 1221 13567777777777654332 122211 123345678899999999999994 85 556999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccccCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHHhc--
Q 006484 425 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 501 (643)
Q Consensus 425 laaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~alP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a-- 501 (643)
|++||+||+|||+.||.++..+++++++ +||+|++|+|++ +.+++..|..||+||+|+||||+.+|+.|++.+
T Consensus 161 LaaGN~VV~KPs~~tp~~~~~l~~l~~~----alP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~ 236 (479)
T cd07116 161 LAAGNCVVLKPAEQTPASILVLMELIGD----LLPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQYASE 236 (479)
T ss_pred HHcCCEEEEECCCCChHHHHHHHHHHHH----HCCcCcEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHc
Confidence 9999999999999999999999999987 499999999995 556777777899999999999999999998877
Q ss_pred -CCCEEEecCccceEEEcCC------CCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC--
Q 006484 502 -KIPVLGHADGICHVYVDKS------ANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-- 571 (643)
Q Consensus 502 -~~p~~lelGG~~p~iV~~d------Adl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~-- 571 (643)
.+|+++|||||||+||++| ||+|.|++.++++.| |+| +|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 237 ~~~p~~lElGGk~p~iV~~da~~~~~adl~~A~~~i~~~~~-~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~~G~ 314 (479)
T cd07116 237 NIIPVTLELGGKSPNIFFADVMDADDAFFDKALEGFVMFAL-NQGEVCTCPSRALIQESIY-DRFMERALERVKAIKQGN 314 (479)
T ss_pred CCCeEEEECCCCCeEEEecCcccccccCHHHHHHHHHHHHh-cCCCCCCCCeEEEEcHHHH-HHHHHHHHHHHHhcCCCC
Confidence 3899999999999999988 799999999998765 666 999999999999999 7999999998887521
Q ss_pred --------------------------------EE-ecCccc------ccc-c-c-C----CCCccccccccCceEEEEEe
Q 006484 572 --------------------------------GL-FGGPRA------SKL-L-Q-I----PETRLFHHEYNSMVCTVEIV 605 (643)
Q Consensus 572 --------------------------------~~-~g~~~~------~~~-~-p-v----~~~~~~~eE~FgPvl~v~~~ 605 (643)
++ .|+... .++ + | | ++|++++||+||||++|++|
T Consensus 315 p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~eE~FGPVl~v~~~ 394 (479)
T cd07116 315 PLDTETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGERNELGGLLGGGYYVPTTFKGGNKMRIFQEEIFGPVLAVTTF 394 (479)
T ss_pred CCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeeecCeEEccCCCChhhhcCCcCceEEEEEe
Confidence 22 243221 132 3 5 2 45889999999999999999
Q ss_pred CCHHHHHHHHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 606 DDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 606 ~~~deAi~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
+|+||||+++|+++|||++||||+|.+++++|++++++
T Consensus 395 ~~~~eai~~aN~~~~gLsa~v~t~d~~~a~~~~~~l~~ 432 (479)
T cd07116 395 KDEEEALEIANDTLYGLGAGVWTRDGNTAYRMGRGIQA 432 (479)
T ss_pred CCHHHHHHHHhCCcccceEEEEcCCHHHHHHHHHhcCc
Confidence 99999999999999999999999999999999999875
No 35
>cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2. Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD.
Probab=100.00 E-value=2.5e-63 Score=548.83 Aligned_cols=351 Identities=19% Similarity=0.212 Sum_probs=294.4
Q ss_pred HHHHcCCceeeEEecCccccccHHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Q 006484 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (643)
Q Consensus 268 ~~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~ 347 (643)
.+|.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|++|.++|+++++.|.+++.
T Consensus 21 ~~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~-- 92 (478)
T cd07085 21 YNPATGEVIARVPLAT------AEEVDAAVAAAKAAFPAWSATPVLKRQQVMFKFRQLLEENLDELARLITLEHGKTL-- 92 (478)
T ss_pred eCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH--
Confidence 3466788899988887 88999999999999999999999999999999999999999999998887765432
Q ss_pred chhhHHHHHhhcChhHHHHHHHHHHHHhcccc-cccccccccccCCCeeEEEEeeeeeeEEEEcCCC-ch-hHHHHHHHH
Q 006484 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFESR-PD-ALVQIASLA 424 (643)
Q Consensus 348 g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~~-P~-~~~~~~~~A 424 (643)
.++ ..++...++.+++++...+ ..|+..+.. ..+...+.+++|+|||++|+||| |. +.+++++||
T Consensus 93 --~~a--------~~ev~~~~~~~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~A 160 (478)
T cd07085 93 --ADA--------RGDVLRGLEVVEFACSIPHLLKGEYLENV--ARGIDTYSYRQPLGVVAGITPFNFPAMIPLWMFPMA 160 (478)
T ss_pred --HHH--------HHHHHHHHHHHHHHHHHHHHhCCeecccC--CCCceeEEEEecceEEEEECCCChHHHHHHHHHHHH
Confidence 122 1345555566665543322 123222110 12344678899999999999985 85 567999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecCcchHhHhhhCCCCccEEEeecCHHHHHHHHHhcC-
Q 006484 425 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK- 502 (643)
Q Consensus 425 laaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a~- 502 (643)
|++||+||+|||+.+|.++.++++++.+ + +|+|++|+|+++.+.++.|..||+||+|+||||+.+|+.|++.+.
T Consensus 161 LaaGN~VvlKps~~tp~~~~~l~~~l~~----aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~ 236 (478)
T cd07085 161 IACGNTFVLKPSERVPGAAMRLAELLQE----AGLPDGVLNVVHGGKEAVNALLDHPDIKAVSFVGSTPVGEYIYERAAA 236 (478)
T ss_pred HhcCCEEEEECCCcCcHHHHHHHHHHHH----hCCCCCcEEEEecCHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhh
Confidence 9999999999999999999999999987 6 999999999964456666778999999999999999999988763
Q ss_pred --CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC--------
Q 006484 503 --IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 571 (643)
Q Consensus 503 --~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~-------- 571 (643)
+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|++++|+|||+++| |+|+++|+++++++++
T Consensus 237 ~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-~~f~~~L~~~~~~l~~G~p~~~~~ 315 (478)
T cd07085 237 NGKRVQALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGDEA-DEWIPKLVERAKKLKVGAGDDPGA 315 (478)
T ss_pred cCCcEEecCCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEeHHHH-HHHHHHHHHHHHhCCCCCCCCCCC
Confidence 9999999999999999999999999999999999988 999999999999999 7999999999887642
Q ss_pred --------------------------EE-ecCcc------cccc-c-c-C-----CCCccccccccCceEEEEEeCCHHH
Q 006484 572 --------------------------GL-FGGPR------ASKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 610 (643)
Q Consensus 572 --------------------------~~-~g~~~------~~~~-~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~de 610 (643)
++ +|+.. ..++ + | | +++.+++||+||||++|++|+|+||
T Consensus 316 ~~gpli~~~~~~~v~~~i~~a~~~Ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~de 395 (478)
T cd07085 316 DMGPVISPAAKERIEGLIESGVEEGAKLVLDGRGVKVPGYENGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVRVDTLDE 395 (478)
T ss_pred CcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCcCCCCeEEcCEEEecCCCCChhhhCcCcCCeEEEEEeCCHHH
Confidence 22 23321 1233 3 6 2 3588999999999999999999999
Q ss_pred HHHHHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 611 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 611 Ai~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
||+++|+++|||++||||+|.+++++|++++++
T Consensus 396 ai~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~ 428 (478)
T cd07085 396 AIAIINANPYGNGAAIFTRSGAAARKFQREVDA 428 (478)
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhCCc
Confidence 999999999999999999999999999999875
No 36
>cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like. NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD.
Probab=100.00 E-value=3.3e-63 Score=546.02 Aligned_cols=351 Identities=19% Similarity=0.214 Sum_probs=293.5
Q ss_pred HHHHcCCceeeEEecCccccccHHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Q 006484 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (643)
Q Consensus 268 ~~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~ 347 (643)
.++++|+.++++...+ .+++++++++|++||+.|+++|..+|.++|++++++|++|.++|+++++.|++++.
T Consensus 15 ~~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-- 86 (465)
T cd07151 15 LNPYTGETLAEIPAAS------KEDVDEAYRAAAAAQKEWAATLPQERAEILEKAAQILEERRDEIVEWLIRESGSTR-- 86 (465)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH--
Confidence 3456788889888777 88999999999999999999999999999999999999999999999887765432
Q ss_pred chhhHHHHHhhcChhHHHHHHHHHHHHhcccccc-cccccccccCCCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHHHHH
Q 006484 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 424 (643)
Q Consensus 348 g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~~A 424 (643)
.++ ..++..+++.+++++...++. +...+. ...+...+++|+|+|||++|+|| ||. +.+++++||
T Consensus 87 --~~a--------~~Ev~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~A 154 (465)
T cd07151 87 --IKA--------NIEWGAAMAITREAATFPLRMEGRILPS--DVPGKENRVYREPLGVVGVISPWNFPLHLSMRSVAPA 154 (465)
T ss_pred --HHH--------HHHHHHHHHHHHHHHHhHHHhcCccccC--CCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHH
Confidence 122 125666667777666543322 222211 11234457789999999999998 585 567899999
Q ss_pred HHhCCEEEEeCCcchHHHH-HHHHHHHHHhcccc-cCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHHhc
Q 006484 425 IRSGNGLLLKGGKEAMRSN-AILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 501 (643)
Q Consensus 425 laaGN~vi~Kps~~tp~t~-~~~~~l~~~a~~~a-lP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a 501 (643)
|++||+||+|||+.+|.++ .++.+++.+ + +|+|++|+|++ +.+++..|..||.+++|+||||+.+|+.|++.+
T Consensus 155 LaaGN~Vi~Kps~~~p~~~~~~l~~~l~~----aG~P~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a 230 (465)
T cd07151 155 LALGNAVVLKPASDTPITGGLLLAKIFEE----AGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELA 230 (465)
T ss_pred HHcCCEEEEECCCCCcHhHHHHHHHHHHH----cCcCccceEEEecCchhhHHHHhcCCCCCEEEEECCHHHHHHHHHHH
Confidence 9999999999999999996 688888876 7 99999999995 556777777899999999999999999998876
Q ss_pred ---CCCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC------
Q 006484 502 ---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------ 571 (643)
Q Consensus 502 ---~~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~------ 571 (643)
.+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|++++|+|||+++| |+|+++|+++++++.+
T Consensus 231 a~~~~~~~lElGGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~~~~g~p~~~ 309 (465)
T cd07151 231 GRHLKKVALELGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVY-DEFVEKFVERVKALPYGDPSDP 309 (465)
T ss_pred HhcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHHHH-HHHHHHHHHHHHhCCCCCCCCC
Confidence 38999999999999999999999999999999999988 999999999999999 7999999999887632
Q ss_pred ----------------------------EE-ecCccccccc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHH
Q 006484 572 ----------------------------GL-FGGPRASKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHI 615 (643)
Q Consensus 572 ----------------------------~~-~g~~~~~~~~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~deAi~~a 615 (643)
++ +|+.....++ | | +++++++||+||||++|++|+|+||||+++
T Consensus 310 ~~~~gpli~~~~~~~v~~~v~~a~~~ga~vl~gg~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~ 389 (465)
T cd07151 310 DTVVGPLINESQVDGLLDKIEQAVEEGATLLVGGEAEGNVLEPTVLSDVTNDMEIAREEIFGPVAPIIKADDEEEALELA 389 (465)
T ss_pred CCCcCCCcCHHHHHHHHHHHHHHHhCCCEEEecCCcCCEEEccEEEeCCCCCCchhhCcCcCCeEEEEeeCCHHHHHHHH
Confidence 11 1221111123 5 2 357899999999999999999999999999
Q ss_pred HccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 616 HQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 616 N~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
|+++|||++||||+|.++++++++++++
T Consensus 390 n~~~~gL~a~v~t~d~~~a~~~~~~l~~ 417 (465)
T cd07151 390 NDTEYGLSGAVFTSDLERGVQFARRIDA 417 (465)
T ss_pred hCCCccceEEEECCCHHHHHHHHHhCCc
Confidence 9999999999999999999999999874
No 37
>cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like. Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD.
Probab=100.00 E-value=3.7e-63 Score=543.56 Aligned_cols=348 Identities=18% Similarity=0.178 Sum_probs=295.7
Q ss_pred HHHcCCceeeEEecCccccccHHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhc
Q 006484 269 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 348 (643)
Q Consensus 269 ~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~g 348 (643)
+|.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|++|.++|++++.+|++++.
T Consensus 3 ~P~tg~~~~~~~~~~------~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~--- 73 (446)
T cd07106 3 NPATGEVFASAPVAS------EAQLDQAVAAAKAAFPGWSATPLEERRAALLAIADAIEANAEELARLLTLEQGKPL--- 73 (446)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH---
Confidence 356788889987777 88999999999999999999999999999999999999999999998876654332
Q ss_pred hhhHHHHHhhcChhHHHHHHHHHHHHhcccccccccccccccCCCeeEEEEeeeeeeEEEEcCCC-ch-hHHHHHHHHHH
Q 006484 349 YAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESR-PD-ALVQIASLAIR 426 (643)
Q Consensus 349 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~~-P~-~~~~~~~~Ala 426 (643)
.++ ..++..+++.++++++...+ +..... ..+...+.+++|+|||++|+||| |. +.++++++||+
T Consensus 74 -~~a--------~~ev~~~~~~l~~~~~~~~~-~~~~~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALa 140 (446)
T cd07106 74 -AEA--------QFEVGGAVAWLRYTASLDLP-DEVIED---DDTRRVELRRKPLGVVAAIVPWNFPLLLAAWKIAPALL 140 (446)
T ss_pred -HHH--------HHHHHHHHHHHHHHHhhhhc-CccccC---CCCceEEEEEEcceEEEEEcCCChHHHHHHHHHHHHHH
Confidence 111 23677777788877654422 111111 12345678899999999999995 85 56799999999
Q ss_pred hCCEEEEeCCcchHHHHHHHHHHHHHhcccccCcCceEeecCcchHhHhhhCCCCccEEEeecCHHHHHHHHHhcC---C
Q 006484 427 SGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK---I 503 (643)
Q Consensus 427 aGN~vi~Kps~~tp~t~~~~~~l~~~a~~~alP~g~v~~v~~~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a~---~ 503 (643)
+||+||+|||+++|.|+.++++++++ ++|+|++|+|+++.+++..|..||++|+|+||||+.+|+.|++++. +
T Consensus 141 aGN~VilKps~~~p~~~~~l~~~~~~----~lP~g~~~~v~g~~~~~~~l~~~~~vd~V~fTGs~~~g~~v~~~aa~~~~ 216 (446)
T cd07106 141 AGNTVVLKPSPFTPLCTLKLGELAQE----VLPPGVLNVVSGGDELGPALTSHPDIRKISFTGSTATGKKVMASAAKTLK 216 (446)
T ss_pred cCCEEEEECCccchHHHHHHHHHHHH----hCCcCeEEEeeCChhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999987 4999999999965457777888999999999999999999998763 8
Q ss_pred CEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC-----------
Q 006484 504 PVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV----------- 571 (643)
Q Consensus 504 p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~----------- 571 (643)
|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 217 ~~~lElGG~~p~iV~~dADl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~v~-d~f~~~l~~~~~~~~~G~p~~~~~~~g 295 (446)
T cd07106 217 RVTLELGGNDAAIVLPDVDIDAVAPKLFWGAFINSGQVCAAIKRLYVHESIY-DEFCEALVALAKAAVVGDGLDPGTTLG 295 (446)
T ss_pred eeEEecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCCCCCCcEEEEccccH-HHHHHHHHHHHHhcCCCCCCCCCCCCC
Confidence 999999999999999999999999999999999988 999999999999999 7999999999887632
Q ss_pred -----------------------EE-ecCccc--ccc-c-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHHc
Q 006484 572 -----------------------GL-FGGPRA--SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQ 617 (643)
Q Consensus 572 -----------------------~~-~g~~~~--~~~-~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~deAi~~aN~ 617 (643)
++ +|+... .++ + | | +++++++||+||||++|++|+|+||||+++|+
T Consensus 296 pli~~~~~~~i~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~ 375 (446)
T cd07106 296 PVQNKMQYDKVKELVEDAKAKGAKVLAGGEPLDGPGYFIPPTIVDDPPEGSRIVDEEQFGPVLPVLKYSDEDEVIARAND 375 (446)
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeeEcCEEEeCCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhC
Confidence 11 233221 133 3 5 2 35789999999999999999999999999999
Q ss_pred cCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 618 HGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 618 ~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
++|||++||||+|.+++.+|++++++
T Consensus 376 ~~~gL~~~i~t~d~~~~~~~~~~~~~ 401 (446)
T cd07106 376 SEYGLGASVWSSDLERAEAVARRLEA 401 (446)
T ss_pred CCCCceEEEECCCHHHHHHHHHhCCc
Confidence 99999999999999999999999875
No 38
>PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed
Probab=100.00 E-value=3.6e-63 Score=547.42 Aligned_cols=350 Identities=17% Similarity=0.156 Sum_probs=289.4
Q ss_pred HHHHcCCceeeEEecCccccccHHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Q 006484 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (643)
Q Consensus 268 ~~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~ 347 (643)
.+|.+|+.++++...+ .+++++++++|++||+.|+++|..+|.++|++++++|++|.++|+++++.|++++.
T Consensus 20 ~~P~t~~~i~~~~~a~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-- 91 (487)
T PRK09457 20 RNPVSGEVLWQGNDAT------AAQVDAAVRAARAAFPAWARLSFEERQAIVERFAALLEENKEELAEVIARETGKPL-- 91 (487)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCH--
Confidence 4467888889987777 88999999999999999999999999999999999999999999999887765432
Q ss_pred chhhHHHHHhhcChhHHHHHHHHHHHHhccc-ccccccccccccCCCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHHHHH
Q 006484 348 GYAKSLVSRLALKPGKISSLAKSIRILADME-EPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 424 (643)
Q Consensus 348 g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~~A 424 (643)
.++. .++..+++.++++++.. +..+..... ..+...+++|+|+|||++|+|| ||. +..+++++|
T Consensus 92 --~~a~--------~ev~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A 158 (487)
T PRK09457 92 --WEAA--------TEVTAMINKIAISIQAYHERTGEKRSE---MADGAAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPA 158 (487)
T ss_pred --HHHH--------HHHHHHHHHHHHHHHHHHHhcCceecc---CCCceeEEEEeccEEEEEECCCchHHHHHHHHHHHH
Confidence 1221 24444444444333211 112222111 1233457789999999999999 485 567899999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecCcchHhHhhhCCCCccEEEeecCHHHHHHHHHhc--
Q 006484 425 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 501 (643)
Q Consensus 425 laaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a-- 501 (643)
|++||+||+|||+.||.|+.++++++.+ + ||+|++|+|+++.++++.|..||+||+|+||||+.+|+.|++.+
T Consensus 159 LaaGN~VvlKPs~~tp~t~~~l~~l~~~----aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~ 234 (487)
T PRK09457 159 LLAGNTVVFKPSELTPWVAELTVKLWQQ----AGLPAGVLNLVQGGRETGKALAAHPDIDGLLFTGSANTGYLLHRQFAG 234 (487)
T ss_pred HHcCCEEEEECCCCCcHHHHHHHHHHHH----hCcCcCeEEEEeCCHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhh
Confidence 9999999999999999999999999987 6 99999999997556777788899999999999999999999864
Q ss_pred --CCCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccC-CchhHHHHHHHHHHcCCE-----
Q 006484 502 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLA-CNGALNELVVELQHEGVG----- 572 (643)
Q Consensus 502 --~~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~-~~~f~~~l~~~~~~~~~~----- 572 (643)
.+|+++|||||||+||++|||+|.|++.+++++|.|+| .|+|++|+|||+++| | +|+++|+++++++++.
T Consensus 235 ~~~~~~~lElGGk~p~IV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~d-~f~~~l~~~~~~~~vG~p~~~ 313 (487)
T PRK09457 235 QPEKILALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPQGAQGD-AFLARLVAVAKRLTVGRWDAE 313 (487)
T ss_pred cCCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHhhccCCCCCCCceEEEeccccHH-HHHHHHHHHHhcCcCCCCCcC
Confidence 26789999999999999999999999999999999998 999999999999996 6 9999999988775321
Q ss_pred ------------------------------E-ecCccc--c-ccc-c-C----CCCccccccccCceEEEEEeCCHHHHH
Q 006484 573 ------------------------------L-FGGPRA--S-KLL-Q-I----PETRLFHHEYNSMVCTVEIVDDVRAAI 612 (643)
Q Consensus 573 ------------------------------~-~g~~~~--~-~~~-p-v----~~~~~~~eE~FgPvl~v~~~~~~deAi 612 (643)
+ .|+... . .++ | | ++|++++||+||||++|++|+|+||||
T Consensus 314 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl~v~~~~~i~~eE~FGPVl~V~~~~~~deai 393 (487)
T PRK09457 314 PQPFMGAVISEQAAQGLVAAQAQLLALGGKSLLEMTQLQAGTGLLTPGIIDVTGVAELPDEEYFGPLLQVVRYDDFDEAI 393 (487)
T ss_pred CCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccCCCCeeEecEEeccCCCChHHhCCCcCCeEEEEEeCCHHHHH
Confidence 1 122111 1 233 5 2 357899999999999999999999999
Q ss_pred HHHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 613 DHIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 613 ~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
+++|+++|||++||||+|.++++++++++++
T Consensus 394 ~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~ 424 (487)
T PRK09457 394 RLANNTRFGLSAGLLSDDREDYDQFLLEIRA 424 (487)
T ss_pred HHHhCCCCCceEEEEcCCHHHHHHHHHhCCc
Confidence 9999999999999999999999999999874
No 39
>PLN02467 betaine aldehyde dehydrogenase
Probab=100.00 E-value=2.7e-63 Score=548.41 Aligned_cols=353 Identities=17% Similarity=0.171 Sum_probs=293.7
Q ss_pred HHHHcCCceeeEEecCccccccHHhHHHHHHHHHHHH-----HHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Q 006484 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESS-----RRLQALQSQDRRKILLDVADALEANESLIKVENEADVA 342 (643)
Q Consensus 268 ~~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~-----~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~ 342 (643)
.+|.+|+.++++...+ .+++++++++|++|| +.|+++|..+|.++|++++++|++|+++|+.+++.|++
T Consensus 28 ~~P~t~~~i~~~~~~~------~~dv~~av~~A~~a~~~~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~G 101 (503)
T PLN02467 28 VNPATEETIGDIPAAT------AEDVDAAVEAARKAFKRNKGKDWARTTGAVRAKYLRAIAAKITERKSELAKLETLDCG 101 (503)
T ss_pred ECCCCCCEEEEEcCCC------HHHHHHHHHHHHHHhhhcccchhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcC
Confidence 3456788889888777 889999999999999 89999999999999999999999999999998887765
Q ss_pred HHHHhchhhHHHHHhhcChhHHHHHHHHHHHHhcccccc-cccccccc-cCCCeeEEEEeeeeeeEEEEcCCC-ch-hHH
Q 006484 343 AAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTE-LADGLILEKTSCPLGVLLIVFESR-PD-ALV 418 (643)
Q Consensus 343 ~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-g~~~~~~~-~~~~~~~~~~~~PlGvv~~I~p~~-P~-~~~ 418 (643)
++. .++. .++..+++.+++++...+.. +....... ...+...+++|+|+|||++|+||| |. +.+
T Consensus 102 k~~----~~a~--------~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 169 (503)
T PLN02467 102 KPL----DEAA--------WDMDDVAGCFEYYADLAEALDAKQKAPVSLPMETFKGYVLKEPLGVVGLITPWNYPLLMAT 169 (503)
T ss_pred CCH----HHHH--------HHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEecCceEEEECCCChHHHHHH
Confidence 432 1221 24555555566555332211 21110000 011334678899999999999995 85 567
Q ss_pred HHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHH
Q 006484 419 QIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQ 496 (643)
Q Consensus 419 ~~~~~AlaaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~ 496 (643)
++++|||++||+||+|||+.||.|+..+++++++ + +|+|++|+|++ +.++++.|..||+||+|+||||+.+|+.
T Consensus 170 ~~i~~ALaaGN~Vv~Kps~~tp~~~~~l~~~~~e----ag~P~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~g~~ 245 (503)
T PLN02467 170 WKVAPALAAGCTAVLKPSELASVTCLELADICRE----VGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGSTATGRK 245 (503)
T ss_pred HHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHH----cCcCcCeEEEEeCCchhHHHHHhcCCCCCEEEEECCHHHHHH
Confidence 9999999999999999999999999999999987 7 99999999995 5567777788999999999999999999
Q ss_pred HHHhc---CCCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC-
Q 006484 497 IKEST---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV- 571 (643)
Q Consensus 497 i~~~a---~~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~- 571 (643)
|++.+ .||+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 246 v~~~aa~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~~g 324 (503)
T PLN02467 246 IMTAAAQMVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLLVHERIA-SEFLEKLVKWAKNIKIS 324 (503)
T ss_pred HHHHHhccCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhhcCCCCCCCcEEEEcHHHH-HHHHHHHHHHHHhcCCC
Confidence 99876 38999999999999999999999999999999999998 999999999999999 7999999999887521
Q ss_pred ---------------------------------EE-ecCccc----ccc-c-c-C-----CCCccccccccCceEEEEEe
Q 006484 572 ---------------------------------GL-FGGPRA----SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIV 605 (643)
Q Consensus 572 ---------------------------------~~-~g~~~~----~~~-~-p-v-----~~~~~~~eE~FgPvl~v~~~ 605 (643)
++ .|+... .++ + | | +++++++||+||||++|++|
T Consensus 325 ~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~ 404 (503)
T PLN02467 325 DPLEEGCRLGPVVSEGQYEKVLKFISTAKSEGATILCGGKRPEHLKKGFFIEPTIITDVTTSMQIWREEVFGPVLCVKTF 404 (503)
T ss_pred CCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCeEEeeEEEeCCCCCChHhhCCCCCceEEEEee
Confidence 12 233221 132 3 5 2 35789999999999999999
Q ss_pred CCHHHHHHHHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 606 DDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 606 ~~~deAi~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
+|+||||+++|+++|||+++|||+|.+++.+|++++++
T Consensus 405 ~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~ 442 (503)
T PLN02467 405 STEDEAIELANDSHYGLAGAVISNDLERCERVSEAFQA 442 (503)
T ss_pred CCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCc
Confidence 99999999999999999999999999999999999875
No 40
>PTZ00381 aldehyde dehydrogenase family protein; Provisional
Probab=100.00 E-value=3.6e-63 Score=544.98 Aligned_cols=339 Identities=18% Similarity=0.190 Sum_probs=285.6
Q ss_pred HHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhhHHHHHhhcChhHHHHHHH
Q 006484 290 QVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAK 369 (643)
Q Consensus 290 ~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~ 369 (643)
.+++++++++|++||+.|+++|.++|.++|++++++|++|.++|++++++|++++. .++...++..+..+++++++
T Consensus 6 ~~~i~~av~~a~~a~~~~~~~~~~~R~~~L~~l~~~l~~~~~~i~~a~~~d~Gk~~----~ea~~~Ev~~~~~~i~~~~~ 81 (493)
T PTZ00381 6 PEIIPPIVKKLKESFLTGKTRPLEFRKQQLRNLLRMLEENKQEFSEAVHKDLGRHP----FETKMTEVLLTVAEIEHLLK 81 (493)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH----HHHHHHHHHHHHHHHHHHHH
Confidence 67999999999999999999999999999999999999999999999999886653 23333345556678888888
Q ss_pred HHHHHhcccccccccccccccCCCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHH
Q 006484 370 SIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILH 447 (643)
Q Consensus 370 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~~AlaaGN~vi~Kps~~tp~t~~~~~ 447 (643)
.++.|++.... . .+... . ....+++|+|+|||++|+|| ||. ++++++++||+|||+||+||||.||.|+.+++
T Consensus 82 ~~~~~~~~~~~-~--~~~~~-~-~~~~~v~~~PlGVV~iI~PwN~Pl~l~~~~l~~ALaaGN~VIlKPse~tp~t~~~l~ 156 (493)
T PTZ00381 82 HLDEYLKPEKV-D--TVGVF-G-PGKSYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSPHTSKLMA 156 (493)
T ss_pred HHHHHhCCccc-C--Ccccc-C-CCceEEEEecCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHH
Confidence 88887643211 1 01001 1 12457889999999999998 584 67899999999999999999999999999999
Q ss_pred HHHHHhcccccCcCceEeecCcchHhHhhhCCCCccEEEeecCHHHHHHHHHhc---CCCEEEecCccceEEEcCCCCHH
Q 006484 448 KVITSAIPDTVGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---KIPVLGHADGICHVYVDKSANLD 524 (643)
Q Consensus 448 ~l~~~a~~~alP~g~v~~v~~~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a---~~p~~lelGG~~p~iV~~dAdl~ 524 (643)
+++.+ +||+|++++|+|+.+.+..|..|| +|+|+||||+.+|+.|++++ .+|+++|||||||+||++|||++
T Consensus 157 ~ll~~----~lp~~~v~vv~g~~~~~~~l~~~~-~d~i~FTGS~~vG~~V~~~aa~~l~pv~lElGGk~p~iV~~dAdl~ 231 (493)
T PTZ00381 157 KLLTK----YLDPSYVRVIEGGVEVTTELLKEP-FDHIFFTGSPRVGKLVMQAAAENLTPCTLELGGKSPVIVDKSCNLK 231 (493)
T ss_pred HHHHH----hCCcCEEEEecCCHHHHHHHHhCC-CCEEEEECCHHHHHHHHHHHHhcCCcEEEEcCCCCceEEcCCCCHH
Confidence 99986 499999999996544554455576 99999999999999999876 39999999999999999999999
Q ss_pred HHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC------------------------------E-
Q 006484 525 VAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------------------------------G- 572 (643)
Q Consensus 525 ~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~------------------------------~- 572 (643)
.|++.+++|+|.|+| +|+|++|+|||+++| |+|+++|++.++++.. +
T Consensus 232 ~Aa~~i~~g~~~naGQ~C~A~~~vlV~~~i~-d~f~~~l~~~~~~~~g~~~~~~~~~gpli~~~~~~ri~~~i~~~ga~~ 310 (493)
T PTZ00381 232 VAARRIAWGKFLNAGQTCVAPDYVLVHRSIK-DKFIEALKEAIKEFFGEDPKKSEDYSRIVNEFHTKRLAELIKDHGGKV 310 (493)
T ss_pred HHHHHHHHHHHhhcCCcCCCCCEEEEeHHHH-HHHHHHHHHHHHHHhCCCCccCCCcCCCCCHHHHHHHHHHHHhCCCcE
Confidence 999999999999988 999999999999999 7999999998876510 1
Q ss_pred EecCccc-cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 573 LFGGPRA-SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 573 ~~g~~~~-~~-~~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
++|+... .+ ++ | | ++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++
T Consensus 311 ~~gG~~~~~~~~i~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~~n~~~~gLa~~vft~d~~~~~~~~~~~~s 390 (493)
T PTZ00381 311 VYGGEVDIENKYVAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDEVLEFINSRPKPLALYYFGEDKRHKELVLENTSS 390 (493)
T ss_pred EECCCcCCCCCeEeeEEEecCCCCChHHhccccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCc
Confidence 1233221 12 23 5 2 3589999999999999999999999999999999999999999999999999999874
No 41
>TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase. This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring.
Probab=100.00 E-value=4.1e-63 Score=548.45 Aligned_cols=349 Identities=20% Similarity=0.221 Sum_probs=292.7
Q ss_pred HHHHcCCceeeEEecCccccccHHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Q 006484 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (643)
Q Consensus 268 ~~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~ 347 (643)
.++.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|++++++|++++++|++++.
T Consensus 21 ~nP~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gk~~-- 92 (488)
T TIGR02299 21 LSPATNEVLGSVARGG------AADVDRAAKAAKEAFKRWAELKAAERKRYLHKIADLIEQHADEIAVLECLDCGQPL-- 92 (488)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcH--
Confidence 3466788889887777 88999999999999999999999999999999999999999999998887765432
Q ss_pred chhhHHHHHhhcChhHHHHHHHHHHHHhcccc--cccccccccccCCCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHHHH
Q 006484 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEE--PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 423 (643)
Q Consensus 348 g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~~ 423 (643)
.++ ..++..+++.++++++..+ ..++..+. .+...+.+++|+|||++|+|| +|. +.+++++|
T Consensus 93 --~~a--------~~ev~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ 158 (488)
T TIGR02299 93 --RQT--------RQQVIRAAENFRFFADKCEEAMDGRTYPV----DTHLNYTVRVPVGPVGLITPWNAPFMLSTWKIAP 158 (488)
T ss_pred --HHH--------HHHHHHHHHHHHHHHHhHHHhcCCccccC----CCceEEEEEEecceEEEECCCccHHHHHHHHHHH
Confidence 122 1245555555665543322 11222221 123457789999999999999 585 56789999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHHhc
Q 006484 424 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 501 (643)
Q Consensus 424 AlaaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a 501 (643)
||++||+||+|||+.+|.|+.++.+++.+ + ||+|++|+|++ +.++++.|..||+||+|+||||+.+|++|++.+
T Consensus 159 ALaaGN~VIlKps~~~p~~~~~l~~~~~~----aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a 234 (488)
T TIGR02299 159 ALAFGNTVVLKPAEWSPLTAARLAEIAKE----AGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMRNG 234 (488)
T ss_pred HHHcCCEEEEECchhchHHHHHHHHHHHH----cCcChhheeEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHH
Confidence 99999999999999999999999999987 7 99999999995 555667777899999999999999999999876
Q ss_pred ---CCCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC------
Q 006484 502 ---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------ 571 (643)
Q Consensus 502 ---~~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~------ 571 (643)
.+|+++|||||||+||++|||+|.|++.+++|+|.|+| +|+|++|+|||+++| |+|+++|+++++++++
T Consensus 235 a~~l~~~~lElGGknp~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~-d~f~~~l~~~~~~l~~g~p~~~ 313 (488)
T TIGR02299 235 ADTLKRFSMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIA-EDFVEKLVERVRAIRVGHPLDP 313 (488)
T ss_pred HhcCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHH-HHHHHHHHHHHhhCCcCCCCCC
Confidence 39999999999999999999999999999999999988 999999999999999 7999999999887632
Q ss_pred ----------------------------EE-ecCccc---------cc-cc-c-C-----CCCccccccccCceEEEEEe
Q 006484 572 ----------------------------GL-FGGPRA---------SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIV 605 (643)
Q Consensus 572 ----------------------------~~-~g~~~~---------~~-~~-p-v-----~~~~~~~eE~FgPvl~v~~~ 605 (643)
++ +|+... .+ ++ | | +++.+++||+||||++|++|
T Consensus 314 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~ 393 (488)
T TIGR02299 314 ETEVGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGEDLGRGNYVLPTVFTGADNHMRIAQEEIFGPVLTVIPF 393 (488)
T ss_pred CCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCcccccccCCCCeEEccEEEecCCCCCchhhCCCcCCeEEEEee
Confidence 12 233221 12 33 5 2 35789999999999999999
Q ss_pred CCHHHHHHHHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 606 DDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 606 ~~~deAi~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
+|+||||+++|+++|||++||||+|.++++++++++++
T Consensus 394 ~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~ 431 (488)
T TIGR02299 394 KDEEEAIEKANDTRYGLAGYVWTNDVGRAHRVALALEA 431 (488)
T ss_pred CCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCc
Confidence 99999999999999999999999999999999999875
No 42
>cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1. NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis.
Probab=100.00 E-value=4.1e-63 Score=544.83 Aligned_cols=349 Identities=16% Similarity=0.174 Sum_probs=296.5
Q ss_pred HHHcCCceeeEEecCccccccHHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhc
Q 006484 269 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 348 (643)
Q Consensus 269 ~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~g 348 (643)
+|.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|++|.++|+++++.|++++.
T Consensus 3 ~P~t~~~i~~~~~~~------~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~--- 73 (457)
T cd07090 3 EPATGEVLATVHCAG------AEDVDLAVKSAKAAQKEWSATSGMERGRILRKAADLLRERNDEIARLETIDNGKPI--- 73 (457)
T ss_pred CCCCCCEEEEEcCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH---
Confidence 456788889888887 88999999999999999999999999999999999999999999999887765432
Q ss_pred hhhHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHHHHHH
Q 006484 349 YAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAI 425 (643)
Q Consensus 349 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~~Al 425 (643)
.++ ..++..+++.++++++..+. .+...+. +.+...+++++|+|||++|+|| +|. +.+++++|||
T Consensus 74 -~~a--------~~ev~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~AL 141 (457)
T cd07090 74 -EEA--------RVDIDSSADCLEYYAGLAPTLSGEHVPL---PGGSFAYTRREPLGVCAGIGAWNYPIQIASWKSAPAL 141 (457)
T ss_pred -HHH--------HHHHHHHHHHHHHHHHHHHHhCCeeecc---CCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHH
Confidence 222 23566667777776654432 2322211 2245567889999999999998 585 5679999999
Q ss_pred HhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecCcchHhHhhhCCCCccEEEeecCHHHHHHHHHhcC--
Q 006484 426 RSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK-- 502 (643)
Q Consensus 426 aaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a~-- 502 (643)
++||+||+|||+.+|.|+.++++++.+ + ||+|++|+|+++..+++.|..||+|++|+||||+.+|++|++.+.
T Consensus 142 aaGN~Vv~Kps~~~~~~~~~l~~~~~~----aGlP~g~~~~v~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~ 217 (457)
T cd07090 142 ACGNAMVYKPSPFTPLTALLLAEILTE----AGLPDGVFNVVQGGGETGQLLCEHPDVAKVSFTGSVPTGKKVMSAAAKG 217 (457)
T ss_pred hcCCeeeecCCCcCcHHHHHHHHHHHH----cCCCcccEEEEeCChhhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhcc
Confidence 999999999999999999999999987 7 999999999964457777778999999999999999999998773
Q ss_pred -CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC---------
Q 006484 503 -IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV--------- 571 (643)
Q Consensus 503 -~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~--------- 571 (643)
+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|++++|+|||+++| |+|+++|+++++++..
T Consensus 218 ~~~~~lelgG~~p~iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~~~~ 296 (457)
T cd07090 218 IKHVTLELGGKSPLIIFDDADLENAVNGAMMANFLSQGQVCSNGTRVFVQRSIK-DEFTERLVERTKKIRIGDPLDEDTQ 296 (457)
T ss_pred CCceEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHH-HHHHHHHHHHHHhcCCCCCCCCCCC
Confidence 8999999999999999999999999999999999988 999999999999999 7999999999887531
Q ss_pred -------------------------EE-ecCccc-------cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHH
Q 006484 572 -------------------------GL-FGGPRA-------SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 610 (643)
Q Consensus 572 -------------------------~~-~g~~~~-------~~-~~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~de 610 (643)
++ +|+... .+ ++ | | ++|++++||+||||++|++|+|+||
T Consensus 297 ~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~de 376 (457)
T cd07090 297 MGALISEEHLEKVLGYIESAKQEGAKVLCGGERVVPEDGLENGFYVSPCVLTDCTDDMTIVREEIFGPVMSILPFDTEEE 376 (457)
T ss_pred cccccCHHHHHHHHHHHHHHHHCCCEEEECCCcCcccccCCCCeeECCEEEecCCCCChHHhCCCCCCeEEEEEECCHHH
Confidence 11 233221 12 33 5 2 3588999999999999999999999
Q ss_pred HHHHHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 611 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 611 Ai~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
||+++|+++|||++||||+|.+++++|++++++
T Consensus 377 ai~~~n~~~~gLsa~i~t~d~~~~~~~~~~l~~ 409 (457)
T cd07090 377 VIRRANDTTYGLAAGVFTRDLQRAHRVIAQLQA 409 (457)
T ss_pred HHHHHhCCCcCceEEEEcCCHHHHHHHHHhCCc
Confidence 999999999999999999999999999999875
No 43
>cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like. NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids.
Probab=100.00 E-value=6.9e-63 Score=540.97 Aligned_cols=344 Identities=19% Similarity=0.228 Sum_probs=289.6
Q ss_pred CceeeEEecCccccccHHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhhHH
Q 006484 274 KRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSL 353 (643)
Q Consensus 274 ~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~g~~~~~ 353 (643)
+.+|++...+ .+++++++++|++||+.|+++|.++|.++|++++++|++|.++|++++++|++++. .++
T Consensus 2 ~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~----~~a- 70 (443)
T cd07152 2 AVLGEVGVAD------AADVDRAAARAAAAQRAWAATPPRERAAVLRRAADLLEEHADEIADWIVRESGSIR----PKA- 70 (443)
T ss_pred CEEEEEcCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCH----HHH-
Confidence 4567777777 88999999999999999999999999999999999999999999999887765432 111
Q ss_pred HHHhhcChhHHHHHHHHHHHHhcccc-cccccccccccCCCeeEEEEeeeeeeEEEEcCCC-ch-hHHHHHHHHHHhCCE
Q 006484 354 VSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFESR-PD-ALVQIASLAIRSGNG 430 (643)
Q Consensus 354 ~~~~~~~~~~i~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~~-P~-~~~~~~~~AlaaGN~ 430 (643)
..++..+++.++++++..+ +.+...+. ..+...+.+|+|+|||++|+||| |. +.+++++|||++||+
T Consensus 71 -------~~ev~~~i~~l~~~~~~~~~~~~~~~~~---~~g~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~ 140 (443)
T cd07152 71 -------GFEVGAAIGELHEAAGLPTQPQGEILPS---APGRLSLARRVPLGVVGVISPFNFPLILAMRSVAPALALGNA 140 (443)
T ss_pred -------HHHHHHHHHHHHHHHHhHHHhCCccccc---cCCceeEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCE
Confidence 2366777777777665432 33332221 13445677899999999999994 85 567899999999999
Q ss_pred EEEeCCcchHHHH-HHHHHHHHHhcccc-cCcCceEeecCcchHhHhhhCCCCccEEEeecCHHHHHHHHHhcC---CCE
Q 006484 431 LLLKGGKEAMRSN-AILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK---IPV 505 (643)
Q Consensus 431 vi~Kps~~tp~t~-~~~~~l~~~a~~~a-lP~g~v~~v~~~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a~---~p~ 505 (643)
||+|||+++|.++ .++++++.+ + +|+|++|+|+++.+++..|..||++|+|+||||+.+|++|++.++ +|+
T Consensus 141 VvlKps~~~p~~~~~~l~~~~~~----ag~P~gvv~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~ 216 (443)
T cd07152 141 VVLKPDPRTPVSGGVVIARLFEE----AGLPAGVLHVLPGGADAGEALVEDPNVAMISFTGSTAVGRKVGEAAGRHLKKV 216 (443)
T ss_pred EEEECCcccchhHHHHHHHHHHH----hCcCcCcEEEecCChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCcE
Confidence 9999999999996 788888887 6 999999999965456777778999999999999999999988763 899
Q ss_pred EEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCCE------------
Q 006484 506 LGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVG------------ 572 (643)
Q Consensus 506 ~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~~------------ 572 (643)
++|||||||+||++|||+|.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++.+.
T Consensus 217 ~lElGGk~~~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~~~~g~p~~~~~~~gpl 295 (443)
T cd07152 217 SLELGGKNALIVLDDADLDLAASNGAWGAFLHQGQICMAAGRHLVHESVA-DAYTAKLAAKAKHLPVGDPATGQVALGPL 295 (443)
T ss_pred EEECCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCcCCeeEEEcHHHH-HHHHHHHHHHHHhCCCCCCCCCCCCcCCC
Confidence 9999999999999999999999999999999988 999999999999999 79999999999876321
Q ss_pred ----------------------E-ecCccccccc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHHccCCCc
Q 006484 573 ----------------------L-FGGPRASKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAH 622 (643)
Q Consensus 573 ----------------------~-~g~~~~~~~~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~deAi~~aN~~~~GL 622 (643)
+ +|+.....++ | | ++|++++||+||||++|++|+|+||||+++|+++|||
T Consensus 296 i~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL 375 (443)
T cd07152 296 INARQLDRVHAIVDDSVAAGARLEAGGTYDGLFYRPTVLSGVKPGMPAFDEEIFGPVAPVTVFDSDEEAVALANDTEYGL 375 (443)
T ss_pred cCHHHHHHHHHHHHHHHhCCCEEEeccCcCCEEEcCEEEecCCCCChhhhccccCCeEEEEeeCCHHHHHHHHhCCCccc
Confidence 1 1221111123 5 2 3588999999999999999999999999999999999
Q ss_pred eeEEEecCHHHHHHHHHhcCC
Q 006484 623 TDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 623 ~a~v~t~d~~~~~~~~~~l~~ 643 (643)
++||||+|.+++.++++++++
T Consensus 376 ~a~v~t~d~~~a~~~~~~l~~ 396 (443)
T cd07152 376 SAGIISRDVGRAMALADRLRT 396 (443)
T ss_pred eEEEECCCHHHHHHHHHhCCc
Confidence 999999999999999999875
No 44
>cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like. Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group.
Probab=100.00 E-value=5.5e-63 Score=545.41 Aligned_cols=351 Identities=21% Similarity=0.211 Sum_probs=295.8
Q ss_pred HHHHc-CCceeeEEecCccccccHHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Q 006484 268 IKVLE-GKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 346 (643)
Q Consensus 268 ~~~~~-g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~ 346 (643)
.+|.+ |+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|++|.++|+++++.|.+++.
T Consensus 19 ~~P~~~~~~i~~~~~~~------~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~- 91 (473)
T cd07097 19 RNPSDTSDVVGKYARAS------AEDADAAIAAAAAAFPAWRRTSPEARADILDKAGDELEARKEELARLLTREEGKTL- 91 (473)
T ss_pred ECCCCCCeEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH-
Confidence 45663 78888887777 88999999999999999999999999999999999999999999999887765432
Q ss_pred hchhhHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHHHH
Q 006484 347 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 423 (643)
Q Consensus 347 ~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~~ 423 (643)
.++ ..++..+++.++++++..+. .|...+. ...+...+..++|+|||++|+|| +|. +.+++++|
T Consensus 92 ---~~a--------~~ev~~~~~~l~~~a~~~~~~~g~~~~~--~~~~~~~~~~~~P~GVv~~I~P~N~Pl~~~~~~i~~ 158 (473)
T cd07097 92 ---PEA--------RGEVTRAGQIFRYYAGEALRLSGETLPS--TRPGVEVETTREPLGVVGLITPWNFPIAIPAWKIAP 158 (473)
T ss_pred ---HHH--------HHHHHHHHHHHHHHHHHHHHhcCccccc--CCCCceEEEEEEeeeeEEEEcccChHHHHHHHHHHH
Confidence 122 12566666777766643321 2322211 11244567889999999999998 585 56699999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHHhc
Q 006484 424 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 501 (643)
Q Consensus 424 AlaaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a 501 (643)
||++||+||+|||+.+|.++.++++++.+ + +|+|++|+|++ +.++++.|..||+||+|+||||+.+|+.|++.+
T Consensus 159 ALaaGN~VIlKps~~~p~~~~~l~~~~~~----aGlP~gvv~vv~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a 234 (473)
T cd07097 159 ALAYGNTVVFKPAELTPASAWALVEILEE----AGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRIAAAA 234 (473)
T ss_pred HHHcCCEEEEeCCCCCcHHHHHHHHHHHH----cCCCCcceEEeccCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence 99999999999999999999999999987 6 99999999995 455777777899999999999999999998876
Q ss_pred ---CCCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC------
Q 006484 502 ---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------ 571 (643)
Q Consensus 502 ---~~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~------ 571 (643)
.+|+++|||||||+||++|||++.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++.+
T Consensus 235 a~~~~~~~lElGGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~ 313 (473)
T cd07097 235 AARGARVQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIH-DRFVEALVERTKALKVGDALDE 313 (473)
T ss_pred hccCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCeeEEEehhHH-HHHHHHHHHHHHhCCCCCCCCC
Confidence 38999999999999999999999999999999999998 999999999999999 7999999999887632
Q ss_pred ----------------------------EE-ecCccc----ccc-c-c-C-----CCCccccccccCceEEEEEeCCHHH
Q 006484 572 ----------------------------GL-FGGPRA----SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 610 (643)
Q Consensus 572 ----------------------------~~-~g~~~~----~~~-~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~de 610 (643)
++ +|+... .++ + | | +++++++||+||||++|++|+|+||
T Consensus 314 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~e 393 (473)
T cd07097 314 GVDIGPVVSERQLEKDLRYIEIARSEGAKLVYGGERLKRPDEGYYLAPALFAGVTNDMRIAREEIFGPVAAVIRVRDYDE 393 (473)
T ss_pred CCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEeccCCCCChhhhCCCcCceEEEeccCCHHH
Confidence 11 233221 133 3 5 2 3589999999999999999999999
Q ss_pred HHHHHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 611 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 611 Ai~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
||+++|+++|||+++|||+|.+++.++++++++
T Consensus 394 ai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~ 426 (473)
T cd07097 394 ALAIANDTEFGLSAGIVTTSLKHATHFKRRVEA 426 (473)
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhCCc
Confidence 999999999999999999999999999999874
No 45
>PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional
Probab=100.00 E-value=5.4e-63 Score=546.14 Aligned_cols=352 Identities=15% Similarity=0.168 Sum_probs=294.9
Q ss_pred HHHHcCCceeeEEecCccccccHHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Q 006484 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (643)
Q Consensus 268 ~~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~ 347 (643)
.+|.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|++++++|++++..|++++.
T Consensus 22 ~~P~t~~~i~~~~~~~------~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~-- 93 (475)
T PRK13473 22 YNPATGEVLAEIAEAS------AAQVDAAVAAADAAFPEWSQTTPKERAEALLKLADAIEENADEFARLESLNCGKPL-- 93 (475)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH--
Confidence 4566788889988887 88999999999999999999999999999999999999999999998876664432
Q ss_pred chhhHHHHHhhcChhHHHHHHHHHHHHhcccccc-cccccccccCCCeeEEEEeeeeeeEEEEcCCC-ch-hHHHHHHHH
Q 006484 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFESR-PD-ALVQIASLA 424 (643)
Q Consensus 348 g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~~-P~-~~~~~~~~A 424 (643)
.++. ..++..+++.+++++...+.. +...+.. ..+...+++|+|+|||++|+||| |. +.+++++||
T Consensus 94 --~~a~-------~~ev~~~~~~~~~~a~~~~~~~g~~~~~~--~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~i~~A 162 (475)
T PRK13473 94 --HLAL-------NDEIPAIVDVFRFFAGAARCLEGKAAGEY--LEGHTSMIRRDPVGVVASIAPWNYPLMMAAWKLAPA 162 (475)
T ss_pred --HHHH-------HHHHHHHHHHHHHHHHHHHHhcCcccccC--CCCceeEEEEecceeEEEEccCChHHHHHHHHHHHH
Confidence 1111 125666666666665433222 2111110 12334577899999999999995 85 567999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccccCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHHhcC-
Q 006484 425 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK- 502 (643)
Q Consensus 425 laaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~alP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a~- 502 (643)
|++||+||+|||+.+|.++.++++++.+ +||+|++|+|++ +.+++..|..||+||+|+||||+++|+.|++.+.
T Consensus 163 LaaGN~VIlKps~~~p~~~~~l~~~~~~----alP~gv~~~v~g~~~~~~~~l~~~~~vd~V~fTGs~~~g~~i~~~aa~ 238 (475)
T PRK13473 163 LAAGNTVVLKPSEITPLTALKLAELAAD----ILPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHVLSAAAD 238 (475)
T ss_pred HhcCCEEEEECCCCChHHHHHHHHHHHH----hCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh
Confidence 9999999999999999999999999987 499999999996 6567777778999999999999999999988773
Q ss_pred --CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC--------
Q 006484 503 --IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 571 (643)
Q Consensus 503 --~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~-------- 571 (643)
+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 239 ~~~~~~lElgG~~p~iV~~dADld~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~~G~p~~~~~ 317 (475)
T PRK13473 239 SVKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRGIY-DDLVAKLAAAVATLKVGDPDDEDT 317 (475)
T ss_pred cCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHH-HHHHHHHHHHHHhCCCCCCCCCCC
Confidence 8999999999999999999999999999999999998 999999999999999 7999999999887532
Q ss_pred ---------------------------EE-ecCccc--cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHHHH
Q 006484 572 ---------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAID 613 (643)
Q Consensus 572 ---------------------------~~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~deAi~ 613 (643)
++ +|++.. .+ ++ | | +++.+++||+||||++|++|+|+||||+
T Consensus 318 ~~gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~ 397 (475)
T PRK13473 318 ELGPLISAAHRDRVAGFVERAKALGHIRVVTGGEAPDGKGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQAVR 397 (475)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHcCCeEEEECCCcCCCCceeEcCEEEecCCCCChhhhCCccCCeEEEeccCCHHHHHH
Confidence 12 233322 23 33 5 2 3589999999999999999999999999
Q ss_pred HHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 614 HIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 614 ~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
++|+++|||++||||+|.+++.++++++++
T Consensus 398 ~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~ 427 (475)
T PRK13473 398 WANDSDYGLASSVWTRDVGRAHRVSARLQY 427 (475)
T ss_pred HHhCCCCCceEEEECCCHHHHHHHHHhCCc
Confidence 999999999999999999999999999875
No 46
>PRK15398 aldehyde dehydrogenase EutE; Provisional
Probab=100.00 E-value=6.2e-63 Score=538.76 Aligned_cols=334 Identities=18% Similarity=0.196 Sum_probs=271.6
Q ss_pred HHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhhHHHHHhhcChhHHHHHHH
Q 006484 290 QVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAK 369 (643)
Q Consensus 290 ~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~ 369 (643)
.+++++++++|++||+.|+++|.++|.++|++++++|++|.++|++++.+|++++ ..++.. ..+.++++
T Consensus 35 ~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~la~~l~~~~~ela~~~~~E~Gk~----~~ea~~-------~~~~~~~~ 103 (465)
T PRK15398 35 FASVDDAVAAAKVAQQRYQQKSLAMRQRIIDAIREALLPHAEELAELAVEETGMG----RVEDKI-------AKNVAAAE 103 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC----cHHHHH-------HHHHHHHH
Confidence 6799999999999999999999999999999999999999999999988776543 122211 12222222
Q ss_pred HHHHHhcccccccccccccccCCCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHH
Q 006484 370 SIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILH 447 (643)
Q Consensus 370 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~~AlaaGN~vi~Kps~~tp~t~~~~~ 447 (643)
..+ +.....+... . ..+...++.++|+|||++|+|| ||. ++++++++||++||+||+|||+.||.|+.+++
T Consensus 104 ~~~---~~~~~~~~~~---~-~~~~~~~v~~~P~GVV~~I~PwN~P~~~~~~~ia~ALaaGN~VVlKps~~tp~t~~~l~ 176 (465)
T PRK15398 104 KTP---GVEDLTTEAL---T-GDNGLTLIEYAPFGVIGAVTPSTNPTETIINNAISMLAAGNSVVFSPHPGAKKVSLRAI 176 (465)
T ss_pred Hhc---cccccccCcc---c-CCCceeEEEecccEEEEEeeCCCCchHHHHHHHHHHHHhCCcEEEECCccchHHHHHHH
Confidence 111 0000001111 1 1122346788999999999999 595 56789999999999999999999999999999
Q ss_pred HHHHHhcccc-cCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHHhcCCCEEEecCccceEEEcCCCCHHH
Q 006484 448 KVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDV 525 (643)
Q Consensus 448 ~l~~~a~~~a-lP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a~~p~~lelGG~~p~iV~~dAdl~~ 525 (643)
+++++++.++ +|+|++|+|++ +.+.++.|..||+||+|+||||+++|+.|++ +++|+++|||||||+||++|||+|+
T Consensus 177 ~ll~~~l~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGS~~~G~~v~~-~~k~~~~elGGk~p~IV~~dADld~ 255 (465)
T PRK15398 177 ELLNEAIVAAGGPENLVVTVAEPTIETAQRLMKHPGIALLVVTGGPAVVKAAMK-SGKKAIGAGAGNPPVVVDETADIEK 255 (465)
T ss_pred HHHHHHHHHcCCCCCeEEEecCCCHHHHHHHHcCCCccEEEeeCCHHHHHHHHH-cCCceeeecCCCceEEEecCCCHHH
Confidence 9999888888 99999999985 4456777778899999999999999999998 5799999999999999999999999
Q ss_pred HHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHH------------HHHc----C--C-E-EecCcc-----c
Q 006484 526 AKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVE------------LQHE----G--V-G-LFGGPR-----A 579 (643)
Q Consensus 526 A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~------------~~~~----~--~-~-~~g~~~-----~ 579 (643)
|++.+++|+|.|+| +|+|++|+|||++|| |+|+++|+++ +.++ + . + +.|+.. .
T Consensus 256 Aa~~i~~g~~~n~GQ~C~A~~rvlV~~si~-d~f~~~l~~~~~~li~~~~~~~v~~~l~~~~~~~~~~~~g~~~~~i~~~ 334 (465)
T PRK15398 256 AARDIVKGASFDNNLPCIAEKEVIVVDSVA-DELMRLMEKNGAVLLTAEQAEKLQKVVLKNGGTVNKKWVGKDAAKILEA 334 (465)
T ss_pred HHHHHHHhcccCCCCcCCCCceEEEeHHHH-HHHHHHHHHcCCccCCHHHHHHHHHHHhhcccccchhhhCCCHHHHHHh
Confidence 99999999999998 999999999999999 7999999872 2211 1 0 1 122221 0
Q ss_pred cc-cc----c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHHccCCCc--eeEEEecCHHHHHHHHHhcCC
Q 006484 580 SK-LL----Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAH--TDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 580 ~~-~~----p-v-----~~~~~~~eE~FgPvl~v~~~~~~deAi~~aN~~~~GL--~a~v~t~d~~~~~~~~~~l~~ 643 (643)
.+ ++ | | ++|++++||+||||++|++|+|+||||+++|+++||| ++||||+|.+++++|++++++
T Consensus 335 ~G~~~~~~~~tvl~~v~~d~~i~~eE~FGPVl~V~~~~d~deAi~~aN~~~yGL~hs~~IfT~d~~~a~~~a~~l~~ 411 (465)
T PRK15398 335 AGINVPKDTRLLIVETDANHPFVVTELMMPVLPVVRVKDVDEAIALAVKLEHGNRHTAIMHSRNVDNLNKMARAIQT 411 (465)
T ss_pred CCCCCCCCCCEEEecCCCCCchhcccccCceEEEEEeCCHHHHHHHHHhcccCCcceEEEecCCHHHHHHHHHhCCc
Confidence 12 22 3 2 3589999999999999999999999999999999988 999999999999999999875
No 47
>PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=7.8e-63 Score=544.98 Aligned_cols=355 Identities=18% Similarity=0.213 Sum_probs=289.3
Q ss_pred HHHHcCCceeeEEecCccccccHHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Q 006484 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (643)
Q Consensus 268 ~~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~ 347 (643)
.+|.+|+.++++...+ .+++++++++|++||+.|+.++..+|.++|+++++.|++|+++|++++++|++++..
T Consensus 36 ~~P~t~~~i~~~~~a~------~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~el~~~~~~e~Gk~~~- 108 (496)
T PLN00412 36 TNPSTRKTQYKVQACT------QEEVNKAMESAKAAQKAWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAK- 108 (496)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH-
Confidence 4567788888887777 889999999999999999999999999999999999999999999999888766432
Q ss_pred chhhHHHHHhhcChhHHHHHHHHHHHHhcccccccccccccccC---CCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHHH
Q 006484 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELA---DGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 422 (643)
Q Consensus 348 g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~ 422 (643)
++. .++......+++++.....+... +........+ .+...+.+|+|+|||++|+|| +|. +++++++
T Consensus 109 ---~a~-~Ev~~~~~~l~~~a~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~ 180 (496)
T PLN00412 109 ---DAV-TEVVRSGDLISYTAEEGVRILGE----GKFLVSDSFPGNERNKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIA 180 (496)
T ss_pred ---HHH-HHHHHHHHHHHHHHHHHHHHhcC----CcccccccCCCccCCceeEEEEecceEEEEECCCCchHHHHHHHHH
Confidence 221 11111222333333332222110 1111100001 122346789999999999999 484 6789999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHHh
Q 006484 423 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 500 (643)
Q Consensus 423 ~AlaaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~ 500 (643)
|||++||+||+|||+.+|.++..+++++.+ + +|+|++|+|++ +.+.+++|..||+|++|+|||| .+|+.|++.
T Consensus 181 ~ALaaGN~VIlKPs~~t~~~~~~l~~~l~~----aglP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs-~~g~~v~~~ 255 (496)
T PLN00412 181 PALIAGNAVVLKPPTQGAVAALHMVHCFHL----AGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGG-DTGIAISKK 255 (496)
T ss_pred HHHHcCCEEEEECCccCcHHHHHHHHHHHH----hCCCcccEEEEecCchHHHHHHhcCCCcCEEEEeCh-HHHHHHHHH
Confidence 999999999999999999999999999987 6 99999999995 4567888889999999999999 999999987
Q ss_pred c-CCCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCCE------
Q 006484 501 T-KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVG------ 572 (643)
Q Consensus 501 a-~~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~~------ 572 (643)
+ .+|+++|||||||+||++|||+|.|++.+++++|.|+| .|+|++|+|||+++| |+|+++|+++++++.+.
T Consensus 256 a~~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~~ 334 (496)
T PLN00412 256 AGMVPLQMELGGKDACIVLEDADLDLAAANIIKGGFSYSGQRCTAVKVVLVMESVA-DALVEKVNAKVAKLTVGPPEDDC 334 (496)
T ss_pred hCCCcEEEEcCCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEcHHHH-HHHHHHHHHHHHhCccCCCcccC
Confidence 7 49999999999999999999999999999999999998 999999999999999 79999999998876431
Q ss_pred ---------------------------EecCccccc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHHc
Q 006484 573 ---------------------------LFGGPRASK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQ 617 (643)
Q Consensus 573 ---------------------------~~g~~~~~~-~~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~deAi~~aN~ 617 (643)
+..+....+ ++ | | +++++++||+||||++|++|+|+||||+++|+
T Consensus 335 ~~gp~i~~~~~~~v~~~i~~a~~~Ga~~l~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~deai~~an~ 414 (496)
T PLN00412 335 DITPVVSESSANFIEGLVMDAKEKGATFCQEWKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNA 414 (496)
T ss_pred CcCCCcCHHHHHHHHHHHHHHHHCCCEEEecCCCCCeEEecEEEeCCCCCCHHHhCcCCCCeEEEEEeCCHHHHHHHHhC
Confidence 110100112 22 5 2 45899999999999999999999999999999
Q ss_pred cCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 618 HGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 618 ~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
++|||++||||+|.+++.+|++++++
T Consensus 415 ~~~gL~a~v~t~d~~~a~~~~~~l~~ 440 (496)
T PLN00412 415 SNFGLQGCVFTRDINKAILISDAMET 440 (496)
T ss_pred CCCCceEEEEcCCHHHHHHHHHhCCc
Confidence 99999999999999999999999875
No 48
>cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like. Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine.
Probab=100.00 E-value=1e-62 Score=541.52 Aligned_cols=350 Identities=17% Similarity=0.205 Sum_probs=291.7
Q ss_pred HHHcCCceeeEEecCccccccHHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhc
Q 006484 269 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 348 (643)
Q Consensus 269 ~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~g 348 (643)
+|.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|++|.++|++++..|++++.
T Consensus 3 ~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~--- 73 (456)
T cd07110 3 NPATEATIGEIPAAT------AEDVDAAVRAARRAFPRWKKTTGAERAKYLRAIAEGVRERREELAELEARDNGKPL--- 73 (456)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH---
Confidence 356788899988777 88999999999999999999999999999999999999999999999887765432
Q ss_pred hhhHHHHHhhcChhHHHHHHHHHHHHhcccccc----cccccccccCCCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHHH
Q 006484 349 YAKSLVSRLALKPGKISSLAKSIRILADMEEPI----GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 422 (643)
Q Consensus 349 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~ 422 (643)
.++. .++..+++.++++++..+.. +...+. ...+...+++++|+|||++|+|| ||. +.+++++
T Consensus 74 -~~a~--------~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~ 142 (456)
T cd07110 74 -DEAA--------WDVDDVAGCFEYYADLAEQLDAKAERAVPL--PSEDFKARVRREPVGVVGLITPWNFPLLMAAWKVA 142 (456)
T ss_pred -HHHH--------HHHHHHHHHHHHHHHHHHHhhccCCccccC--CCCCceeEEEEecceeEEEECCCChHHHHHHHHHH
Confidence 2221 23444444444443322111 111111 11244567889999999999998 595 5678999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHHh
Q 006484 423 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 500 (643)
Q Consensus 423 ~AlaaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~ 500 (643)
+||++||+||+|||+.||+++..+++++.+ + +|+|++|+|++ +.+.++.|..||++|+|+||||+.+|+.|++.
T Consensus 143 ~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~----aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~ 218 (456)
T cd07110 143 PALAAGCTVVLKPSELTSLTELELAEIAAE----AGLPPGVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQA 218 (456)
T ss_pred HHHHcCCEEEEECcccchHHHHHHHHHHHH----cCCCCCcEEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHH
Confidence 999999999999999999999999999987 7 99999999995 55577878889999999999999999999987
Q ss_pred cC---CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC-----
Q 006484 501 TK---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV----- 571 (643)
Q Consensus 501 a~---~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~----- 571 (643)
+. +|+++|||||||+||++|||+|.|++.+++|+|.|+| .|++++|+|||+++| |+|+++|+++++++.+
T Consensus 219 aa~~~~~~~lElgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~ 297 (456)
T cd07110 219 AAQDIKPVSLELGGKSPIIVFDDADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIA-DAFLERLATAAEAIRVGDPLE 297 (456)
T ss_pred HhhcCCeEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHH-HHHHHHHHHHHHhcCCCCCCC
Confidence 73 8999999999999999999999999999999999988 999999999999999 7999999999876521
Q ss_pred -----------------------------EE-ecCccc----ccc-c-c-C-----CCCccccccccCceEEEEEeCCHH
Q 006484 572 -----------------------------GL-FGGPRA----SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 609 (643)
Q Consensus 572 -----------------------------~~-~g~~~~----~~~-~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~d 609 (643)
++ .|+... .++ + | | ++|++++||+||||++|++|+|+|
T Consensus 298 ~~~~~Gpli~~~~~~~~~~~v~~a~~~Ga~~~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~ 377 (456)
T cd07110 298 EGVRLGPLVSQAQYEKVLSFIARGKEEGARLLCGGRRPAHLEKGYFIAPTVFADVPTDSRIWREEIFGPVLCVRSFATED 377 (456)
T ss_pred CCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcccccCCCCcCCCEEEecCCCCChHhhCCCcCCeEEEEecCCHH
Confidence 22 243321 233 3 5 2 357899999999999999999999
Q ss_pred HHHHHHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 610 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 610 eAi~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
|||+++|+++|||++||||+|.+++.+|++++++
T Consensus 378 eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~ 411 (456)
T cd07110 378 EAIALANDSEYGLAAAVISRDAERCDRVAEALEA 411 (456)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCc
Confidence 9999999999999999999999999999999874
No 49
>TIGR01804 BADH glycine betaine aldehyde dehydrogenase. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171).
Probab=100.00 E-value=6e-63 Score=544.66 Aligned_cols=351 Identities=15% Similarity=0.173 Sum_probs=295.9
Q ss_pred HHHHcCCceeeEEecCccccccHHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Q 006484 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (643)
Q Consensus 268 ~~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~ 347 (643)
.++.+|+.++.+...+ .+++++++++|++||+.|+++|.++|.++|++++++|++++++|++++.+|++++.
T Consensus 18 ~nP~t~~~i~~~~~~~------~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~-- 89 (467)
T TIGR01804 18 INPANQEVIATVAEAT------REDVERAIAAARRAQGEWASMTPEERGRILRRIAELIRERNEELAKLETLDTGKTL-- 89 (467)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH--
Confidence 3466788888887777 88999999999999999999999999999999999999999999998887765432
Q ss_pred chhhHHHHHhhcChhHHHHHHHHHHHHhcccccc-cccccccccCCCeeEEEEeeeeeeEEEEcCCC-ch-hHHHHHHHH
Q 006484 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFESR-PD-ALVQIASLA 424 (643)
Q Consensus 348 g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~~-P~-~~~~~~~~A 424 (643)
.++. ..++..+++.++++++..+.. +...+. ......+.+|+|+|||++|+||| |. +.+++++||
T Consensus 90 --~~a~-------~~ev~~~~~~l~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~A 157 (467)
T TIGR01804 90 --EETS-------VADMDDIADVFEFFAGLADKDGGEIIPL---PIPSFSYTIREPLGVCVGIGAWNYPLQIASWKIAPA 157 (467)
T ss_pred --HHHh-------HHHHHHHHHHHHHHHHHHHHhCCccccC---CCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHH
Confidence 2221 135666777777766544322 222211 11134578899999999999995 85 567999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHHhc-
Q 006484 425 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 501 (643)
Q Consensus 425 laaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a- 501 (643)
|++||+||+|||+.+|.|+..+++++.+ + +|+|++|+|++ +.++++.|..||+||+|+||||+.+|+.|++.+
T Consensus 158 LaaGN~VvlKps~~tp~~~~~l~~~~~~----aglP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~ 233 (467)
T TIGR01804 158 LAAGNAMVFKPSEITPLTALKVAELMEE----AGLPDGVFNVVLGKGAEVGEPLVNHKDVAKVSFTGGVPTGKKIMAAAA 233 (467)
T ss_pred HhcCCEEEeeCCccCcHHHHHHHHHHHH----cCcCcCcEEEEeCCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHH
Confidence 9999999999999999999999999987 7 99999999995 466788888899999999999999999999877
Q ss_pred --CCCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC-------
Q 006484 502 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 571 (643)
Q Consensus 502 --~~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~------- 571 (643)
.||+++|||||||+||++|||+|.|++.+++++|.|+| .|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 234 ~~l~~~~lElGG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~~ 312 (467)
T TIGR01804 234 DHLKHVTMELGGKSPLIVFDDADLELAVDQAMNGNFFSAGQVCSNGTRVFVHNKIK-EKFEARLVERTKRIKLGDGFDEA 312 (467)
T ss_pred hcCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCCCCCCCEEEEcHHHH-HHHHHHHHHHHHhCCCCCCCCCC
Confidence 38999999999999999999999999999999999998 999999999999999 7999999998876521
Q ss_pred ---------------------------EE-ecCccc------cc-cc-c-C-----CCCccccccccCceEEEEEeCCHH
Q 006484 572 ---------------------------GL-FGGPRA------SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 609 (643)
Q Consensus 572 ---------------------------~~-~g~~~~------~~-~~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~d 609 (643)
++ +|+... .+ ++ | | +++++++||+||||++|++|+|+|
T Consensus 313 ~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~d 392 (467)
T TIGR01804 313 TEMGPLISAEHRDKVESYIEKGKEEGATLACGGKRPEREGLQNGFFIEPTVFTDCTDDMTIVREEIFGPVMTVLTFSSED 392 (467)
T ss_pred CccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCeEEeeEEEeCCCCCChHHhCCCCCceEEEEecCCHH
Confidence 12 233221 12 23 5 2 358899999999999999999999
Q ss_pred HHHHHHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 610 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 610 eAi~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
|||+++|+++|||++||||+|.+++.+|++++++
T Consensus 393 eai~~~n~~~~gLsa~i~t~d~~~~~~~~~~l~~ 426 (467)
T TIGR01804 393 EVIARANDTIYGLAAGVFTADLGRAHRVANQLKA 426 (467)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCc
Confidence 9999999999999999999999999999999875
No 50
>cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like. NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD.
Probab=100.00 E-value=9.2e-63 Score=541.92 Aligned_cols=352 Identities=18% Similarity=0.254 Sum_probs=293.5
Q ss_pred HHHcCCceeeEEecCccccccHHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhc
Q 006484 269 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 348 (643)
Q Consensus 269 ~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~g 348 (643)
+|.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|++|.++|++++..|++++.
T Consensus 5 ~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~--- 75 (456)
T cd07145 5 NPANGEVIDTVPSLS------REEVREAIEVAEKAKDVMSNLPAYKRYKILMKVAELIERRKEELAKLLTIEVGKPI--- 75 (456)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCH---
Confidence 456788888887777 88999999999999999999999999999999999999999999998887765432
Q ss_pred hhhHHHHHhhcChhHHHHHHHHHHHHhcccc-cccccccccc--cCCCeeEEEEeeeeeeEEEEcCCC-ch-hHHHHHHH
Q 006484 349 YAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTE--LADGLILEKTSCPLGVLLIVFESR-PD-ALVQIASL 423 (643)
Q Consensus 349 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~g~~~~~~~--~~~~~~~~~~~~PlGvv~~I~p~~-P~-~~~~~~~~ 423 (643)
.++ ..++..+++.++++++..+ ..+...+... ...+...+..++|+|||++|+||| |. +.++++++
T Consensus 76 -~~a--------~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ 146 (456)
T cd07145 76 -KQS--------RVEVERTIRLFKLAAEEAKVLRGETIPVDAYEYNERRIAFTVREPIGVVGAITPFNFPANLFAHKIAP 146 (456)
T ss_pred -HHH--------HHHHHHHHHHHHHHHHHHHHhcCccccCccccccCCceeEEEEecceeEEEECCCChHHHHHHHHHHH
Confidence 122 1245566666666554322 1122211100 011334677899999999999994 85 56789999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHHhc
Q 006484 424 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 501 (643)
Q Consensus 424 AlaaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a 501 (643)
||++||+||+|||+.+|.|+.++++++++ + +|+|++|+|++ +.++++.|..||++++|+||||+.+|+.|++.+
T Consensus 147 ALaaGN~VV~Kps~~~p~~~~~l~~~~~~----ag~p~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~a 222 (456)
T cd07145 147 AIAVGNSVVVKPSSNTPLTAIELAKILEE----AGLPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASKA 222 (456)
T ss_pred HHHcCCEEEEECCccchHHHHHHHHHHHH----cCCCcccEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHH
Confidence 99999999999999999999999999987 6 99999999995 566777777899999999999999999999877
Q ss_pred C---CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC------
Q 006484 502 K---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------ 571 (643)
Q Consensus 502 ~---~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~------ 571 (643)
. +|+++|||||||+||++|||+|.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++.+
T Consensus 223 a~~~~~v~lElgG~n~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~ 301 (456)
T cd07145 223 GGTGKKVALELGGSDPMIVLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVY-DKFLKLLVEKVKKLKVGDPLDE 301 (456)
T ss_pred hhcCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCccCeeEEEcHHHH-HHHHHHHHHHHhcCCcCCCCCC
Confidence 4 9999999999999999999999999999999999988 999999999999999 7999999999887532
Q ss_pred ----------------------------EE-ecCccccc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHH
Q 006484 572 ----------------------------GL-FGGPRASK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDH 614 (643)
Q Consensus 572 ----------------------------~~-~g~~~~~~-~~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~deAi~~ 614 (643)
++ .|+....+ ++ | | +++.+++||+||||++|++|+|+||||++
T Consensus 302 ~~~~gpli~~~~~~~~~~~i~~a~~~ga~vl~gg~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~ 381 (456)
T cd07145 302 STDLGPLISPEAVERMENLVNDAVEKGGKILYGGKRDEGSFFPPTVLENDTPDMIVMKEEVFGPVLPIAKVKDDEEAVEI 381 (456)
T ss_pred CCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCeEECCEeecCCCCCChHhhCCCCCceEEEEEECCHHHHHHH
Confidence 11 23322212 23 5 2 35789999999999999999999999999
Q ss_pred HHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 615 IHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 615 aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
+|+++|||++||||+|.+++.+|++++++
T Consensus 382 ~n~~~~gL~~~v~t~d~~~~~~~~~~~~~ 410 (456)
T cd07145 382 ANSTEYGLQASVFTNDINRALKVARELEA 410 (456)
T ss_pred HhCCCCCceEEEECCCHHHHHHHHHhCCc
Confidence 99999999999999999999999999874
No 51
>cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like. Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD.
Probab=100.00 E-value=1.2e-62 Score=540.82 Aligned_cols=349 Identities=19% Similarity=0.219 Sum_probs=294.6
Q ss_pred HHHcCCceeeEEecCccccccHHhHHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Q 006484 269 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQ-ALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (643)
Q Consensus 269 ~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~-~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~ 347 (643)
+|.+|+.++++...+ .+++++++++|++||+.|. ++|.++|.++|++++++|++|.++|+++++.|++++.
T Consensus 3 ~P~tg~~i~~~~~~~------~~dv~~av~~a~~A~~~~~~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~-- 74 (454)
T cd07109 3 DPSTGEVFARIARGG------AADVDRAVQAARRAFESGWLRLSPAERGRLLLRIARLIREHADELARLESLDTGKPL-- 74 (454)
T ss_pred CCCCCCEEEEEcCCC------HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCH--
Confidence 356788889988887 8899999999999999876 9999999999999999999999999999887765432
Q ss_pred chhhHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHHHHH
Q 006484 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 424 (643)
Q Consensus 348 g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~~A 424 (643)
.++ ..++..+++.++++++..+. .|...+. ..+...+.+++|+|||++|+|| +|. +.++++++|
T Consensus 75 --~~a--------~~ev~~~~~~l~~~~~~~~~~~g~~~~~---~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~A 141 (454)
T cd07109 75 --TQA--------RADVEAAARYFEYYGGAADKLHGETIPL---GPGYFVYTVREPHGVTGHIIPWNYPLQITGRSVAPA 141 (454)
T ss_pred --HHH--------HHHHHHHHHHHHHHHHHHHHhcCccccc---CCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHH
Confidence 122 12556666666666544322 2222221 1344567889999999999999 584 667999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHHhc-
Q 006484 425 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 501 (643)
Q Consensus 425 laaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a- 501 (643)
|++||+||+|||+.+|.|+.++++++.+ + ||+|++|+|++ +.+.++.|..||++|+|+||||+.+|+.|++.+
T Consensus 142 LaaGN~VvlKps~~~p~~~~~l~~~~~~----aGlP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa 217 (454)
T cd07109 142 LAAGNAVVVKPAEDAPLTALRLAELAEE----AGLPAGALNVVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAA 217 (454)
T ss_pred HHcCCEEEEECCCCChHHHHHHHHHHHH----cCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHh
Confidence 9999999999999999999999999987 6 99999999995 555677677899999999999999999999876
Q ss_pred --CCCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC-------
Q 006484 502 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 571 (643)
Q Consensus 502 --~~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~------- 571 (643)
.+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|++++|+|||+++| |+|+++|+++++++.+
T Consensus 218 ~~~~p~~lElgG~~~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~~~~G~p~~~~ 296 (454)
T cd07109 218 ENVVPVTLELGGKSPQIVFADADLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIY-DEVLERLVERFRALRVGPGLEDP 296 (454)
T ss_pred hcCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCccCcEEEEcHHHH-HHHHHHHHHHHHhCCCCCCcccC
Confidence 48999999999999999999999999999999999998 999999999999999 7999999999876542
Q ss_pred --------------------------EEe-cCccc-----cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHH
Q 006484 572 --------------------------GLF-GGPRA-----SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAA 611 (643)
Q Consensus 572 --------------------------~~~-g~~~~-----~~-~~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~deA 611 (643)
+++ |+... .+ ++ | | +++.+++||+||||++|++|+|+|||
T Consensus 297 ~~gpli~~~~~~~~~~~i~~a~~~ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deA 376 (454)
T cd07109 297 DLGPLISAKQLDRVEGFVARARARGARIVAGGRIAEGAPAGGYFVAPTLLDDVPPDSRLAQEEIFGPVLAVMPFDDEAEA 376 (454)
T ss_pred cCCCccCHHHHHHHHHHHHHHHhCCCEEEeCCCcCcccCCCCcEECcEEEecCCCCChhhhCCCCCceEEEEecCCHHHH
Confidence 222 33221 13 23 5 2 35899999999999999999999999
Q ss_pred HHHHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 612 IDHIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 612 i~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
|+++|+++|||++||||+|.+++.+|++++++
T Consensus 377 i~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~ 408 (454)
T cd07109 377 IALANGTDYGLVAGVWTRDGDRALRVARRLRA 408 (454)
T ss_pred HHHhhCCCCCceEEEECCCHHHHHHHHHhcCc
Confidence 99999999999999999999999999999875
No 52
>cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like. Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s).
Probab=100.00 E-value=1.3e-62 Score=540.09 Aligned_cols=350 Identities=17% Similarity=0.183 Sum_probs=287.6
Q ss_pred HHHcCCceeeEEecCccccccHHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhc
Q 006484 269 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 348 (643)
Q Consensus 269 ~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~g 348 (643)
+|.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|++|.++|++++.+|++++..
T Consensus 2 ~P~tg~~i~~~~~~~------~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~-- 73 (454)
T cd07101 2 APFTGEPLGELPQST------PADVEAAFARARAAQRAWAARPFAERAAVFLRFHDLVLERRDELLDLIQLETGKARR-- 73 (454)
T ss_pred cCCCCCEEEEEcCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHH--
Confidence 356888899888887 889999999999999999999999999999999999999999999999888765432
Q ss_pred hhhHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHHHHHH
Q 006484 349 YAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAI 425 (643)
Q Consensus 349 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~~Al 425 (643)
++. .++..++..+++++..... .+........+.....+.+++|+|||++|+|| +|. ++++++++||
T Consensus 74 --~a~--------~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~AL 143 (454)
T cd07101 74 --HAF--------EEVLDVAIVARYYARRAERLLKPRRRRGAIPVLTRTTVNRRPKGVVGVISPWNYPLTLAVSDAIPAL 143 (454)
T ss_pred --HHH--------HHHHHHHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEEeccEEEEECCCccHHHHHHHHHHHHH
Confidence 221 1333344444443322111 11110000011123557889999999999998 584 6789999999
Q ss_pred HhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHHhcC-
Q 006484 426 RSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK- 502 (643)
Q Consensus 426 aaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a~- 502 (643)
++||+||+|||+.+|.++.++.+++.+ + ||+|++|+|++ +.+.++.|..| +++|+||||+.+|+.|++.++
T Consensus 144 aaGN~vvlKps~~~p~~~~~l~~~~~~----aglP~gv~~~v~g~~~~~~~~l~~~--~~~V~fTGs~~~g~~i~~~aa~ 217 (454)
T cd07101 144 LAGNAVVLKPDSQTALTALWAVELLIE----AGLPRDLWQVVTGPGSEVGGAIVDN--ADYVMFTGSTATGRVVAERAGR 217 (454)
T ss_pred HcCCEEEEECCccchHHHHHHHHHHHH----cCcCCCcEEEEeCCcHHHHHHHHhC--CCEEEEECCHHHHHHHHHHHHh
Confidence 999999999999999999999999987 7 99999999995 55567766666 689999999999999998773
Q ss_pred --CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC--------
Q 006484 503 --IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 571 (643)
Q Consensus 503 --~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~-------- 571 (643)
+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 218 ~~~~~~lElgG~~p~iV~~dAdl~~a~~~i~~~~~~~sGQ~C~a~~rv~V~~~i~-d~f~~~L~~~~~~~~~G~~~~~~~ 296 (454)
T cd07101 218 RLIGCSLELGGKNPMIVLEDADLDKAAAGAVRACFSNAGQLCVSIERIYVHESVY-DEFVRRFVARTRALRLGAALDYGP 296 (454)
T ss_pred cCCcEEEECCCCceEEECCCCCHHHHHHHHHHHHHhcCCCCcccCeEEEEcHHHH-HHHHHHHHHHHhhCCCCCCCCCCC
Confidence 9999999999999999999999999999999999987 999999999999999 7999999999887531
Q ss_pred --------------------------EE-ecCcc-c--cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHHHH
Q 006484 572 --------------------------GL-FGGPR-A--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAID 613 (643)
Q Consensus 572 --------------------------~~-~g~~~-~--~~-~~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~deAi~ 613 (643)
++ +|+.. . .+ ++ | | +++.+++||+||||++|++|+|+||||+
T Consensus 297 ~~gpli~~~~~~~v~~~v~~a~~~Ga~vl~gg~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~ 376 (454)
T cd07101 297 DMGSLISQAQLDRVTAHVDDAVAKGATVLAGGRARPDLGPYFYEPTVLTGVTEDMELFAEETFGPVVSIYRVADDDEAIE 376 (454)
T ss_pred CcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEeeCCHHHHHH
Confidence 12 23321 1 12 33 5 2 3578999999999999999999999999
Q ss_pred HHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 614 HIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 614 ~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
++|+++|||++||||+|.+++.+|++++++
T Consensus 377 ~~n~~~~gL~~~i~t~d~~~a~~~~~~l~~ 406 (454)
T cd07101 377 LANDTDYGLNASVWTRDGARGRRIAARLRA 406 (454)
T ss_pred HHhCCCCCceEEEEcCCHHHHHHHHHhcCc
Confidence 999999999999999999999999999874
No 53
>cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like. NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD.
Probab=100.00 E-value=1.1e-62 Score=542.46 Aligned_cols=350 Identities=16% Similarity=0.145 Sum_probs=294.9
Q ss_pred HHHcCCceeeEEecCccccccHHhHHHHHHHHHHHHH-HHh-cCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Q 006484 269 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSR-RLQ-ALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 346 (643)
Q Consensus 269 ~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~-~w~-~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~ 346 (643)
+|.+|+.++++...+ .+++++++++|++||+ .|+ ++|.++|.++|+++++.|++|.++|++++++|++++..
T Consensus 28 ~P~t~~~i~~~~~~~------~~~v~~av~~a~~a~~~~W~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~ 101 (481)
T cd07143 28 NPSTGKLITKIAEAT------EADVDIAVEVAHAAFETDWGLKVSGSKRGRCLSKLADLMERNLDYLASIEALDNGKTFG 101 (481)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHhhhhhhcccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChH
Confidence 456788889988887 8899999999999998 599 99999999999999999999999999998877654321
Q ss_pred hchhhHHHHHhhcChhHHHHHHHHHHHHhcccccc-cccccccccCCCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHHHH
Q 006484 347 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 423 (643)
Q Consensus 347 ~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~~ 423 (643)
+.. ..++..+++.+++++++.++. |..... ..+...+.+|+|+|||++|+|| ||. +.+++++|
T Consensus 102 ----~~~-------~~ev~~~~~~~~~~a~~a~~~~g~~~~~---~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ 167 (481)
T cd07143 102 ----TAK-------RVDVQASADTFRYYGGWADKIHGQVIET---DIKKLTYTRHEPIGVCGQIIPWNFPLLMCAWKIAP 167 (481)
T ss_pred ----HHH-------HHHHHHHHHHHHHHHHHHHHhcCccccC---CCCceEEEEEecceeEEEECCCcChHHHHHHHHHH
Confidence 111 125666777777776554432 332221 1234457789999999999999 586 45799999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHHhc
Q 006484 424 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 501 (643)
Q Consensus 424 AlaaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a 501 (643)
||++||+||+|||+.+|.++.++++++.+ + ||+|++|+|++ +.++++.|..||+||+|+||||+.+|+.|++.+
T Consensus 168 ALaaGN~VvlKps~~~p~~~~~l~~~l~~----aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~G~~i~~~a 243 (481)
T cd07143 168 ALAAGNTIVLKPSELTPLSALYMTKLIPE----AGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVMEAA 243 (481)
T ss_pred HHHcCCEEEEeCCCCCcHHHHHHHHHHHh----cCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECchHHHHHHHHHH
Confidence 99999999999999999999999999987 7 99999999995 456778888899999999999999999998865
Q ss_pred C----CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC-----
Q 006484 502 K----IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV----- 571 (643)
Q Consensus 502 ~----~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~----- 571 (643)
. +|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 244 a~~~~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~naGQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~G~p~~ 322 (481)
T cd07143 244 AKSNLKKVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIY-DKFVKRFKEKAKKLKVGDPFA 322 (481)
T ss_pred HHhcCCEEEeecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEeHhHH-HHHHHHHHHHHHhcCCCCCCC
Confidence 3 6999999999999999999999999999999999998 999999999999999 7999999999887632
Q ss_pred -----------------------------EE-ecCccc--cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHH
Q 006484 572 -----------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAA 611 (643)
Q Consensus 572 -----------------------------~~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~deA 611 (643)
++ .|+... .+ ++ | | +++++++||+||||++|++|+|+|||
T Consensus 323 ~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~ea 402 (481)
T cd07143 323 EDTFQGPQVSQIQYERIMSYIESGKAEGATVETGGKRHGNEGYFIEPTIFTDVTEDMKIVKEEIFGPVVAVIKFKTEEEA 402 (481)
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCceEEeeEEEecCCCCChhhhcCCcCCeEEEEeeCCHHHH
Confidence 11 233221 12 23 5 2 35789999999999999999999999
Q ss_pred HHHHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 612 IDHIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 612 i~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
|+++|+++|||++||||+|.+++.+|++++++
T Consensus 403 i~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~ 434 (481)
T cd07143 403 IKRANDSTYGLAAAVFTNNINNAIRVANALKA 434 (481)
T ss_pred HHHHhCCCCCceEEEECCCHHHHHHHHHhcCc
Confidence 99999999999999999999999999999874
No 54
>PLN02203 aldehyde dehydrogenase
Probab=100.00 E-value=2.1e-62 Score=536.42 Aligned_cols=339 Identities=19% Similarity=0.203 Sum_probs=280.9
Q ss_pred HHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhhHHHHHhhcChhHHHHHHH
Q 006484 290 QVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAK 369 (643)
Q Consensus 290 ~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~ 369 (643)
.+++++++++|++||+.|+.+|..+|.++|++++++|++|+++|+++++.|++++. .++...++......++++++
T Consensus 5 ~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~----~ea~~~Ev~~~~~~~~~~~~ 80 (484)
T PLN02203 5 GETLEGSVAELRETYESGRTRSLEWRKSQLKGLLRLLKDNEEAIFKALHQDLGKHR----VEAYRDEVGVLTKSANLALS 80 (484)
T ss_pred HHHHHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH----HHHHHHHHHHHHHHHHHHHH
Confidence 57999999999999999999999999999999999999999999999988876542 23322233334445555555
Q ss_pred HHHHHhcccccccccccccccCCCeeEEEEeeeeeeEEEEcCCC-ch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHH
Q 006484 370 SIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESR-PD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILH 447 (643)
Q Consensus 370 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~~-P~-~~~~~~~~AlaaGN~vi~Kps~~tp~t~~~~~ 447 (643)
.++.+.+... + ..+.. ..+...++.|+|+|||++|+||| |. +.++++++||++||+||+|||+.||.|+.+++
T Consensus 81 ~~~~~~~~~~--~-~~~~~--~~~~~~~~~reP~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~ 155 (484)
T PLN02203 81 NLKKWMAPKK--A-KLPLV--AFPATAEVVPEPLGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPATSAFLA 155 (484)
T ss_pred HHHHHhcccc--c-cCCcc--cCCceeEEEEecccEEEEEcCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHH
Confidence 5555432110 0 11110 12235678899999999999995 85 56789999999999999999999999999999
Q ss_pred HHHHHhcccccCcCceEeecCcchHhHhhhCCCCccEEEeecCHHHHHHHHHhc---CCCEEEecCccceEEEcC---CC
Q 006484 448 KVITSAIPDTVGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---KIPVLGHADGICHVYVDK---SA 521 (643)
Q Consensus 448 ~l~~~a~~~alP~g~v~~v~~~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a---~~p~~lelGG~~p~iV~~---dA 521 (643)
+++.+ +||+|++|+|+|+.++++.|..|+ +|+|+||||+++|+.|++.+ .+|+++|||||||+||++ ||
T Consensus 156 ~~~~~----~lP~gvv~vv~g~~~~~~~l~~~~-vd~v~fTGS~~~G~~v~~~aa~~l~~v~lElGGknp~iV~~d~~da 230 (484)
T PLN02203 156 ANIPK----YLDSKAVKVIEGGPAVGEQLLQHK-WDKIFFTGSPRVGRIIMTAAAKHLTPVALELGGKCPCIVDSLSSSR 230 (484)
T ss_pred HHHHH----hCCcCEEEEEeCCHHHHHHHHhCC-CCEEEEECCHHHHHHHHHHHHhcCCCEEEEecCCCeEEEccCCCCC
Confidence 99986 499999999997666777777785 99999999999999998877 499999999999999997 69
Q ss_pred CHHHHHHHHHhhcCC-CCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC----------------------------
Q 006484 522 NLDVAKNIVIDAKID-YPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV---------------------------- 571 (643)
Q Consensus 522 dl~~A~~~iv~~~~~-n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~---------------------------- 571 (643)
|+|.|++.+++|+|. |+| +|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 231 Dl~~aa~~i~~~~f~~~aGQ~C~a~~rv~V~~~i~-d~f~~~L~~~~~~~~~G~p~~~~~~Gpli~~~~~~~v~~~i~~a 309 (484)
T PLN02203 231 DTKVAVNRIVGGKWGSCAGQACIAIDYVLVEERFA-PILIELLKSTIKKFFGENPRESKSMARILNKKHFQRLSNLLKDP 309 (484)
T ss_pred CHHHHHHHHHHHhcccCCCCccccCCeEEEcHHHH-HHHHHHHHHHHHHhcCCCCCcCCCcCCCCCHHHHHHHHHHHHHH
Confidence 999999999999995 777 999999999999999 7999999998876531
Q ss_pred ----E-EecCccc-ccc-c-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEecCHHHHHHH
Q 006484 572 ----G-LFGGPRA-SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETF 637 (643)
Q Consensus 572 ----~-~~g~~~~-~~~-~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~~~~~ 637 (643)
. +.|+... .++ + | | ++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++
T Consensus 310 ~~~~~~~~gg~~~~~g~~i~PTvl~~v~~d~~i~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~vft~d~~~a~~~ 389 (484)
T PLN02203 310 RVAASIVHGGSIDEKKLFIEPTILLNPPLDSDIMTEEIFGPLLPIITVKKIEDSIAFINSKPKPLAIYAFTNNEKLKRRI 389 (484)
T ss_pred HhCCeEEeCCCcCCCCCEEeeEEEecCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHH
Confidence 1 1233221 233 3 5 2 3589999999999999999999999999999999999999999999999999
Q ss_pred HHhcCC
Q 006484 638 LCQVDR 643 (643)
Q Consensus 638 ~~~l~~ 643 (643)
++++++
T Consensus 390 ~~~l~~ 395 (484)
T PLN02203 390 LSETSS 395 (484)
T ss_pred HHhCCc
Confidence 999874
No 55
>TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase. Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism.
Probab=100.00 E-value=1.6e-62 Score=542.27 Aligned_cols=350 Identities=17% Similarity=0.142 Sum_probs=289.3
Q ss_pred HHHHcCCceeeEEecCccccccHHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Q 006484 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (643)
Q Consensus 268 ~~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~ 347 (643)
.+|.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|++|+++|++++..|.+++..
T Consensus 18 ~~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~- 90 (484)
T TIGR03240 18 TNPATQEVLWQGAAAS------AAQVEAAVAAARAAFPAWARLSLEERIAVVQRFAALLEERKEALARVIARETGKPLW- 90 (484)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH-
Confidence 3456788889988887 889999999999999999999999999999999999999999999988776654321
Q ss_pred chhhHHHHHhhcChhHHHHHHHHHHHHhccc-ccccccccccccCCCeeEEEEeeeeeeEEEEcCCC-ch-hHHHHHHHH
Q 006484 348 GYAKSLVSRLALKPGKISSLAKSIRILADME-EPIGQILKRTELADGLILEKTSCPLGVLLIVFESR-PD-ALVQIASLA 424 (643)
Q Consensus 348 g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~~-P~-~~~~~~~~A 424 (643)
++ ..++..+++.+++++... ...|..... .+ +...++.++|+|||++|+||| |. +.++++++|
T Consensus 91 ---~a--------~~ev~~~~~~~~~~~~~~~~~~g~~~~~--~~-~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~A 156 (484)
T TIGR03240 91 ---ET--------RTEVASMIGKVAISIKAYHERTGESENP--MP-DGRAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPA 156 (484)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHHHHHhcCccccC--CC-CceeEEEEecccEEEEECCCchHHHHHHHHHHHH
Confidence 21 124555555555433221 112322111 11 223567899999999999994 85 567899999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecCcchHhHhhhCCCCccEEEeecCHHHHHHHHHhc--
Q 006484 425 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 501 (643)
Q Consensus 425 laaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a-- 501 (643)
|++||+||+|||+.||+|+..+++++++ + +|+|++|+|+++.++++.|..||+||+|+||||+++|+.|++.+
T Consensus 157 LaaGN~VVlKPs~~tp~t~~~l~~~~~~----aGlP~gvv~~v~g~~~~~~~L~~~~~vd~V~fTGS~~~G~~i~~~aa~ 232 (484)
T TIGR03240 157 LLAGNTVVFKPSELTPWVAEETVKLWEK----AGLPAGVLNLVQGARETGVALAAHPDIDGLLFTGSSNTGHLLHRQFAG 232 (484)
T ss_pred HHcCCEEEEECCccccHHHHHHHHHHHH----hCcCcccEEEEeCCHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhh
Confidence 9999999999999999999999999987 7 99999999997556778788899999999999999999998864
Q ss_pred --CCCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCcc-CCchhHHHHHHHHHHcCCE-----
Q 006484 502 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDL-ACNGALNELVVELQHEGVG----- 572 (643)
Q Consensus 502 --~~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i-~~~~f~~~l~~~~~~~~~~----- 572 (643)
.+|+++|||||||+||++|||+|.|++.+++++|.|+| .|+|++|+|||+++ | |+|+++|+++++++.+.
T Consensus 233 ~~~~~~~lElGGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~~~-d~f~~~l~~~~~~~~~g~~~~~ 311 (484)
T TIGR03240 233 RPEKILALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQG-DAFLARLVEVAERLTVGAWDAE 311 (484)
T ss_pred cCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeccccH-HHHHHHHHHHHHhcccCCCCcC
Confidence 26799999999999999999999999999999999988 99999999999998 7 69999999988765321
Q ss_pred ------------------------------E-ecCcc--ccc-cc-c-C----CCCccccccccCceEEEEEeCCHHHHH
Q 006484 573 ------------------------------L-FGGPR--ASK-LL-Q-I----PETRLFHHEYNSMVCTVEIVDDVRAAI 612 (643)
Q Consensus 573 ------------------------------~-~g~~~--~~~-~~-p-v----~~~~~~~eE~FgPvl~v~~~~~~deAi 612 (643)
+ +|+.. ..+ ++ | | ++|.+++||+||||++|++|+|+||||
T Consensus 312 ~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~i~PTvl~v~~~~~i~~eE~FGPVl~v~~~~~~~eai 391 (484)
T TIGR03240 312 PQPFMGAVISLQAAQRLLAAQAKLLALGGKSLLAMRQLDPGAALLTPGIIDVTGVAELPDEEHFGPLLQVIRYDDFDEAI 391 (484)
T ss_pred CCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCEEEcCEEEccCCCCHHHhCCCcCCeEEEEEeCCHHHHH
Confidence 1 12211 112 33 5 2 347899999999999999999999999
Q ss_pred HHHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 613 DHIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 613 ~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
+++|+++|||++||||+|.++++++++++++
T Consensus 392 ~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~a 422 (484)
T TIGR03240 392 AIANNTRFGLSAGLLSDDRELYDRFLLEIRA 422 (484)
T ss_pred HHHhCCCCCceEEEEcCCHHHHHHHHHhCCc
Confidence 9999999999999999999999999999875
No 56
>cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like. 4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD.
Probab=100.00 E-value=1.5e-62 Score=539.71 Aligned_cols=350 Identities=18% Similarity=0.178 Sum_probs=294.1
Q ss_pred HHHcCCceeeEEecCccccccHHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhc
Q 006484 269 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 348 (643)
Q Consensus 269 ~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~g 348 (643)
+|.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|++|+++|++++.+|++++.
T Consensus 3 ~P~t~~~i~~~~~~~------~~~v~~av~~a~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~--- 73 (453)
T cd07115 3 NPATGELIARVAQAS------AEDVDAAVAAARAAFEAWSAMDPAERGRILWRLAELILANADELARLESLDTGKPI--- 73 (453)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH---
Confidence 356788889887777 88999999999999999999999999999999999999999999999887765432
Q ss_pred hhhHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHHHHHH
Q 006484 349 YAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAI 425 (643)
Q Consensus 349 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~~Al 425 (643)
.++.. .++..+++.+++++.+.++ .+...+. ..+...+.+++|+|||++|+|| ||. +.++++++||
T Consensus 74 -~~~~~-------~ev~~~i~~l~~~~~~~~~~~g~~~~~---~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL 142 (453)
T cd07115 74 -RAARR-------LDVPRAADTFRYYAGWADKIEGEVIPV---RGPFLNYTVREPVGVVGAIVPWNFPLMFAAWKVAPAL 142 (453)
T ss_pred -HHHHH-------HHHHHHHHHHHHHHHHHHHhcCceecC---CCCceEEEEecceeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 12211 2455556666665544322 2322211 1344567889999999999999 585 5678999999
Q ss_pred HhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHHhc--
Q 006484 426 RSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 501 (643)
Q Consensus 426 aaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a-- 501 (643)
++||+||+|||++||.++..+.+++.+ + ||+|++|+|++ +.++++.|..||++|+|+||||+.+|+.|++.+
T Consensus 143 aaGN~Vi~Kps~~~p~~~~~l~~~~~~----aGlP~~~~~~v~g~~~~~~~~l~~~~~id~v~fTGs~~~g~~v~~~aa~ 218 (453)
T cd07115 143 AAGNTVVLKPAELTPLSALRIAELMAE----AGFPAGVLNVVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAAG 218 (453)
T ss_pred hcCCEEEEECCCCCcHHHHHHHHHHHh----cCcCchheEEEecCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh
Confidence 999999999999999999999999987 7 99999999995 456777788899999999999999999998876
Q ss_pred -CCCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcC---------
Q 006484 502 -KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEG--------- 570 (643)
Q Consensus 502 -~~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~--------- 570 (643)
.+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|++|+|||+++| |+|+++|+++++++.
T Consensus 219 ~~~~~~lElgG~~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~-~~f~~~l~~~~~~~~~g~p~~~~~ 297 (453)
T cd07115 219 NLKRVSLELGGKSANIVFADADLDAAVRAAATGIFYNQGQMCTAGSRLLVHESIY-DEFLERFTSLARSLRPGDPLDPKT 297 (453)
T ss_pred cCCeEEEecCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCeEEEEcHHHH-HHHHHHHHHHHhcCCcCCCCCCCC
Confidence 38999999999999999999999999999999999988 999999999999999 799999999887652
Q ss_pred -------------------------CEE-ecCccc--cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHH
Q 006484 571 -------------------------VGL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDH 614 (643)
Q Consensus 571 -------------------------~~~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~deAi~~ 614 (643)
.++ +|+... .+ ++ | | +++++++||+||||++|++|+|+||||++
T Consensus 298 ~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~ 377 (453)
T cd07115 298 QMGPLVSQAQFDRVLDYVDVGREEGARLLTGGKRPGARGFFVEPTIFAAVPPEMRIAQEEIFGPVVSVMRFRDEEEALRI 377 (453)
T ss_pred CCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceECCEEEecCCCCChHhhCCCcCceEEEEeeCCHHHHHHH
Confidence 222 244322 23 33 5 2 35789999999999999999999999999
Q ss_pred HHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 615 IHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 615 aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
+|+++|||++||||+|.+.+++|++++++
T Consensus 378 ~n~~~~gL~~~ifs~d~~~~~~~~~~l~~ 406 (453)
T cd07115 378 ANGTEYGLAAGVWTRDLGRAHRVAAALKA 406 (453)
T ss_pred HhCCCCCCeEEEECCCHHHHHHHHHhcCc
Confidence 99999999999999999999999999874
No 57
>cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like. NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD.
Probab=100.00 E-value=1.9e-62 Score=542.58 Aligned_cols=350 Identities=15% Similarity=0.218 Sum_probs=294.2
Q ss_pred HHHcCCceeeEEecCccccccHHhHHHHHHHHHHHHHH-HhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Q 006484 269 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRR-LQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (643)
Q Consensus 269 ~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~-w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~ 347 (643)
+|.+|+.++++...+ .+++++++++|++||+. |+++|.++|.++|++++++|+++.++|++++.+|++++..
T Consensus 29 ~P~tg~~i~~~~~~~------~~~v~~ai~~A~~A~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gk~~~- 101 (484)
T cd07144 29 NPSTGEVIASVYAAG------EEDVDKAVKAARKAFESWWSKVTGEERGELLDKLADLVEKNRDLLAAIEALDSGKPYH- 101 (484)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHhhHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChH-
Confidence 456788889888887 88999999999999996 8899999999999999999999999999988777544311
Q ss_pred chhhHHHHHhhcChhHHHHHHHHHHHHhcccccc-cccccccccCCCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHHHHH
Q 006484 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 424 (643)
Q Consensus 348 g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~~A 424 (643)
+.. ..++..+++.+++++++.+.. |...+. ..+...+..|+|+|||++|+|| ||. +++++++||
T Consensus 102 ---~~~-------~~ev~~~~~~l~~~~~~~~~~~g~~~~~---~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~A 168 (484)
T cd07144 102 ---SNA-------LGDLDEIIAVIRYYAGWADKIQGKTIPT---SPNKLAYTLHEPYGVCGQIIPWNYPLAMAAWKLAPA 168 (484)
T ss_pred ---HHH-------HHHHHHHHHHHHHHHHHHHHhcCceecC---CCCceEEEEEecceEEEEECcCCCHHHHHHHHHHHH
Confidence 111 235666666667666543322 322221 1234457889999999999998 586 467999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHHhc-
Q 006484 425 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 501 (643)
Q Consensus 425 laaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a- 501 (643)
|++||+||+|||+.+|.++..+.+++.+ + +|+|++|+|++ +.++++.|..||+||+|+||||+.+|++|++.+
T Consensus 169 LaaGN~VV~Kps~~~p~~~~~l~~~~~~----aglP~gv~~~v~g~~~~~~~~L~~~~~vd~V~fTGS~~~g~~i~~~a~ 244 (484)
T cd07144 169 LAAGNTVVIKPAENTPLSLLYFANLVKE----AGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLVMKAAA 244 (484)
T ss_pred HHcCCEEEEECCccchHHHHHHHHHHHH----hCcCCCcEEEEecCCchHHHHHhcCCCcCEEEEECcHHHHHHHHHHHH
Confidence 9999999999999999999999999987 6 99999999995 556788888899999999999999999998876
Q ss_pred --CCCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHH-cC-------
Q 006484 502 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQH-EG------- 570 (643)
Q Consensus 502 --~~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~-~~------- 570 (643)
.+|+++|||||||+||++|||++.|++.+++|+|.|+| .|+|++|+|||+++| |+|+++|++++++ ++
T Consensus 245 ~~~~~~~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~~G~p~~~ 323 (484)
T cd07144 245 QNLKAVTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQESIY-DKFVEKFVEHVKQNYKVGSPFDD 323 (484)
T ss_pred hcCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHH-HHHHHHHHHHHHhhCCcCCCCCC
Confidence 38999999999999999999999999999999999998 999999999999999 7999999998874 32
Q ss_pred ---------------------------CEE-ecCccc-----ccc-c-c-C-----CCCccccccccCceEEEEEeCCHH
Q 006484 571 ---------------------------VGL-FGGPRA-----SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 609 (643)
Q Consensus 571 ---------------------------~~~-~g~~~~-----~~~-~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~d 609 (643)
.++ +|+... .++ + | | +++.+++||+||||++|++|+|+|
T Consensus 324 ~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~ 403 (484)
T cd07144 324 DTVVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGGEKAPEGLGKGYFIPPTIFTDVPQDMRIVKEEIFGPVVVISKFKTYE 403 (484)
T ss_pred CCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCcccCCCCceECCEEEeCCCCCCchhhCCCCCceEEEeccCCHH
Confidence 122 344321 233 3 5 2 357999999999999999999999
Q ss_pred HHHHHHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 610 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 610 eAi~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
|||+++|+++|||++||||+|.+++.+|++++++
T Consensus 404 eai~~~n~~~~gLsa~i~t~d~~~a~~~~~~l~~ 437 (484)
T cd07144 404 EAIKKANDTTYGLAAAVFTKDIRRAHRVARELEA 437 (484)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCc
Confidence 9999999999999999999999999999999875
No 58
>cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like. Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD.
Probab=100.00 E-value=2.1e-62 Score=538.76 Aligned_cols=353 Identities=22% Similarity=0.248 Sum_probs=290.4
Q ss_pred HHHHcCCceeeEEecCccccccHHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Q 006484 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (643)
Q Consensus 268 ~~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~ 347 (643)
.+|.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|++|.++|++++..|++++.
T Consensus 4 ~~P~t~~~~~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~-- 75 (452)
T cd07147 4 TNPYTGEVVARVALAG------PDDIEEAIAAAVKAFRPMRALPAHRRAAILLHCVARLEERFEELAETIVLEAGKPI-- 75 (452)
T ss_pred cCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH--
Confidence 3466788889987777 88999999999999999999999999999999999999999999998877664432
Q ss_pred chhhHHHHHhhcChhHHHHHHHHHHHHhcccc-cccccccccc--cCCCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHHH
Q 006484 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTE--LADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 422 (643)
Q Consensus 348 g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~g~~~~~~~--~~~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~ 422 (643)
.++. .++...+..++++++... ..++...... ...+...++.++|+|||++|+|| +|. +.+++++
T Consensus 76 --~~a~--------~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~ 145 (452)
T cd07147 76 --KDAR--------GEVARAIDTFRIAAEEATRIYGEVLPLDISARGEGRQGLVRRFPIGPVSAITPFNFPLNLVAHKVA 145 (452)
T ss_pred --HHHH--------HHHHHHHHHHHHHHHHHHHhCCcccccccccCCCCceeEEEEeceeEEEEEcCCCcHHHHHHHHHH
Confidence 1221 244455555555443221 1122111000 01234456789999999999998 485 5678999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecCcchHhHhhhCCCCccEEEeecCHHHHHHHHHhc
Q 006484 423 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 501 (643)
Q Consensus 423 ~AlaaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a 501 (643)
+||++||+||+|||+.+|.++.++++++.+ + +|+|++|+++++.+.+..|..||++|+|+||||+.+|+.|++.+
T Consensus 146 ~ALaaGN~VIlKps~~~p~~~~~l~~~l~~----ag~P~g~v~~v~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~v~~~a 221 (452)
T cd07147 146 PAIAAGCPFVLKPASRTPLSALILGEVLAE----TGLPKGAFSVLPCSRDDADLLVTDERIKLLSFTGSPAVGWDLKARA 221 (452)
T ss_pred HHHHcCCEEEEECCCCCcHHHHHHHHHHHH----cCCCcCcEEEEeCCccchhHHhcCCCCCEEEEECCHHHHHHHHHHh
Confidence 999999999999999999999999999987 6 99999999996445567777889999999999999999999876
Q ss_pred -CCCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC--------
Q 006484 502 -KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 571 (643)
Q Consensus 502 -~~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~-------- 571 (643)
.+|+++|||||||+||++|||+|.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++.+
T Consensus 222 ~~~~v~lelgG~~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~-d~f~~~L~~~~~~~~~g~p~~~~~ 300 (452)
T cd07147 222 GKKKVVLELGGNAAVIVDSDADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVY-DEFKSRLVARVKALKTGDPKDDAT 300 (452)
T ss_pred CcCceEeecCCCCcEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEchhHH-HHHHHHHHHHHHhCCCCCCCCCCC
Confidence 48999999999999999999999999999999999988 999999999999999 7999999999987632
Q ss_pred --------------------------EE-ecCccccccc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHHc
Q 006484 572 --------------------------GL-FGGPRASKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQ 617 (643)
Q Consensus 572 --------------------------~~-~g~~~~~~~~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~deAi~~aN~ 617 (643)
++ .|+.....++ | | +++++++||+||||++|++|+|+||||+++|+
T Consensus 301 ~~gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~ 380 (452)
T cd07147 301 DVGPMISESEAERVEGWVNEAVDAGAKLLTGGKRDGALLEPTILEDVPPDMEVNCEEVFGPVVTVEPYDDFDEALAAVND 380 (452)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCEEEcCEEEeCCCCCChHHhCcCcCCeEEEEEeCCHHHHHHHHhC
Confidence 11 1221111123 5 2 35789999999999999999999999999999
Q ss_pred cCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 618 HGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 618 ~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
++|||++||||+|.+++.+|++++++
T Consensus 381 ~~~gL~~~v~t~d~~~a~~~~~~~~~ 406 (452)
T cd07147 381 SKFGLQAGVFTRDLEKALRAWDELEV 406 (452)
T ss_pred CCCCceEEEECCCHHHHHHHHHHcCc
Confidence 99999999999999999999999874
No 59
>cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like. The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD.
Probab=100.00 E-value=2e-62 Score=540.26 Aligned_cols=348 Identities=19% Similarity=0.172 Sum_probs=289.6
Q ss_pred HHHHcCCceeeEEecCccccccHHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Q 006484 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (643)
Q Consensus 268 ~~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~ 347 (643)
.+|.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|++|.++|++++++|++++.
T Consensus 19 ~~P~~~~~~~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~-- 90 (466)
T cd07138 19 INPATEEVIGTVPLGT------AADVDRAVAAARRAFPAWSATSVEERAALLERIAEAYEARADELAQAITLEMGAPI-- 90 (466)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH--
Confidence 3456788889988777 88999999999999999999999999999999999999999999999877765432
Q ss_pred chhhHHHHHhhcChhHHHHHHHHHHHHhcccccccccccccccCCCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHHHHHH
Q 006484 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAI 425 (643)
Q Consensus 348 g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~~Al 425 (643)
.++.. .++...++.++++++..+...... .. ...+.+++|+|||++|+|| ||. +++++++|||
T Consensus 91 --~~~~~-------~ev~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~AL 155 (466)
T cd07138 91 --TLARA-------AQVGLGIGHLRAAADALKDFEFEE-----RR-GNSLVVREPIGVCGLITPWNWPLNQIVLKVAPAL 155 (466)
T ss_pred --HHHHH-------HHHHHHHHHHHHHHHhhhhccccc-----cC-ceEEEEEeecceEEEECCCccHHHHHHHHHHHHH
Confidence 12211 133444444454443222111110 11 1346689999999999998 594 6789999999
Q ss_pred HhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHHhcC-
Q 006484 426 RSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK- 502 (643)
Q Consensus 426 aaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a~- 502 (643)
++||+||+|||+.+|+|+.++++++.+ + +|+|++|+|++ +.++++.|..||+|++|+||||+.+|+.|++.+.
T Consensus 156 aaGN~Vv~Kps~~~p~~~~~l~~~~~~----aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~ 231 (466)
T cd07138 156 AAGCTVVLKPSEVAPLSAIILAEILDE----AGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEAAAD 231 (466)
T ss_pred hcCCEEEEECCCcCcHHHHHHHHHHHH----cCCCCCcEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc
Confidence 999999999999999999999999987 7 99999999995 5567788888999999999999999999988773
Q ss_pred --CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC--------
Q 006484 503 --IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 571 (643)
Q Consensus 503 --~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~-------- 571 (643)
+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|++++|+|||+++| |+|+++|+++++++.+
T Consensus 232 ~~~~v~lElgG~~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~~~ 310 (466)
T cd07138 232 TVKRVALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRY-AEAEEIAAAAAEAYVVGDPRDPAT 310 (466)
T ss_pred cCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHhHH-HHHHHHHHHHHHhcCCCCCCCCCC
Confidence 8999999999999999999999999999999999988 999999999999999 7999999998876521
Q ss_pred --------------------------EE-ecCc-cc----ccc-c-c-C-----CCCccccccccCceEEEEEeCCHHHH
Q 006484 572 --------------------------GL-FGGP-RA----SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAA 611 (643)
Q Consensus 572 --------------------------~~-~g~~-~~----~~~-~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~deA 611 (643)
++ +|+. .. .++ + | | +++++++||+||||++|++|+|+|||
T Consensus 311 ~~gpli~~~~~~~~~~~v~~a~~~Ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~fgPvl~v~~~~~~~ea 390 (466)
T cd07138 311 TLGPLASAAQFDRVQGYIQKGIEEGARLVAGGPGRPEGLERGYFVKPTVFADVTPDMTIAREEIFGPVLSIIPYDDEDEA 390 (466)
T ss_pred cCCccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCcCCCCceECCEEecCCCCCChHHhCCCCCceEEEeccCCHHHH
Confidence 12 2332 11 133 3 5 2 35789999999999999999999999
Q ss_pred HHHHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 612 IDHIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 612 i~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
|+++|+++|||+++|||+|.+++.+|++++++
T Consensus 391 i~~~n~~~~gL~a~i~t~d~~~a~~~~~~l~~ 422 (466)
T cd07138 391 IAIANDTPYGLAGYVWSADPERARAVARRLRA 422 (466)
T ss_pred HHHHhCCCCCceEEEEcCCHHHHHHHHHhcCc
Confidence 99999999999999999999999999999874
No 60
>cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like. ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH.
Probab=100.00 E-value=3.1e-62 Score=541.71 Aligned_cols=352 Identities=17% Similarity=0.206 Sum_probs=292.2
Q ss_pred HHHH-cCCceeeEEecCccccccHHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Q 006484 268 IKVL-EGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 346 (643)
Q Consensus 268 ~~~~-~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~ 346 (643)
.++. +|+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|+++.++|++++..|++++.
T Consensus 37 ~~P~~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~- 109 (500)
T cd07083 37 VSPFAPSEVVGTTAKAD------KAEAEAALEAAWAAFKTWKDWPQEDRARLLLKAADLLRRRRRELIATLTYEVGKNW- 109 (500)
T ss_pred eCCCCCCcEEEEEcCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCCH-
Confidence 4555 477888887777 88999999999999999999999999999999999999999999999887765432
Q ss_pred hchhhHHHHHhhcChhHHHHHHHHHHHHhcccccc-cccccccccCCCeeEEEEeeeeeeEEEEcCCC-ch-hHHHHHHH
Q 006484 347 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFESR-PD-ALVQIASL 423 (643)
Q Consensus 347 ~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~~-P~-~~~~~~~~ 423 (643)
.++ ..++..+++.++++++..... +..... ....+...+..++|+|||++|+||| |. +.++++++
T Consensus 110 ---~~a--------~~ev~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ 177 (500)
T cd07083 110 ---VEA--------IDDVAEAIDFIRYYARAALRLRYPAVEV-VPYPGEDNESFYVGLGAGVVISPWNFPVAIFTGMIVA 177 (500)
T ss_pred ---HHH--------HHHHHHHHHHHHHHHHHHHHhcCccccc-CCCCCceEEEEEeccceEEEEcCCccHHHHHHHHHHH
Confidence 121 234555555566555432211 211100 0112344567899999999999994 85 56799999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHHhc
Q 006484 424 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 501 (643)
Q Consensus 424 AlaaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a 501 (643)
||++||+||+|||+.||.|+.++++++.+ + +|+|++|+|++ +.++++.|..||+||+|+||||+.+|+.|++.+
T Consensus 178 ALaaGN~VVlKPs~~tp~~~~~l~~~~~e----aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~v~~~a 253 (500)
T cd07083 178 PVAVGNTVIAKPAEDAVVVGYKVFEIFHE----AGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLETGKKIYEAA 253 (500)
T ss_pred HHHcCCeEEEeCCCcchHHHHHHHHHHHH----cCCCCCceEEEeCCCchhHHHHhcCCCcCEEEEECcHHHHHHHHHHH
Confidence 99999999999999999999999999987 7 99999999995 566778888899999999999999999998765
Q ss_pred C---------CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC
Q 006484 502 K---------IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV 571 (643)
Q Consensus 502 ~---------~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~ 571 (643)
. +|+++|||||||+||++|||+|.|++.+++++|.|+| .|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 254 a~~~~~~~~~~~v~lElgG~~~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~ 332 (500)
T cd07083 254 ARLAPGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAASRLILTQGAY-EPVLERLLKRAERLSV 332 (500)
T ss_pred hhccccccccCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHH-HHHHHHHHHHHHcCCC
Confidence 2 8999999999999999999999999999999999988 999999999999999 7999999999877532
Q ss_pred E----------------------------------EecCccc--cc-cc-c-C-----CCCccccccccCceEEEEEeC-
Q 006484 572 G----------------------------------LFGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVD- 606 (643)
Q Consensus 572 ~----------------------------------~~g~~~~--~~-~~-p-v-----~~~~~~~eE~FgPvl~v~~~~- 606 (643)
. ++|+... .+ ++ | | +++.+++||+||||++|++|+
T Consensus 333 G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~g~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~d 412 (500)
T cd07083 333 GPPEENGTDLGPVIDAEQEAKVLSYIEHGKNEGQLVLGGKRLEGEGYFVAPTVVEEVPPKARIAQEEIFGPVLSVIRYKD 412 (500)
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCEEEeCCCcCCCCCeEEccEEEeCCCCCChHhhCCCCCceEEEEEeCC
Confidence 0 1233221 12 23 5 2 358899999999999999999
Q ss_pred -CHHHHHHHHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 607 -DVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 607 -~~deAi~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
|+||||+++|+++|||++||||+|.+++.+|++++++
T Consensus 413 ~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~ 450 (500)
T cd07083 413 DDFAEALEVANSTPYGLTGGVYSRKREHLEEARREFHV 450 (500)
T ss_pred CCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCe
Confidence 9999999999999999999999999999999999874
No 61
>cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like. Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde.
Probab=100.00 E-value=2.3e-62 Score=538.73 Aligned_cols=350 Identities=18% Similarity=0.198 Sum_probs=292.3
Q ss_pred HHHcCCceeeEEecCccccccHHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhc
Q 006484 269 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 348 (643)
Q Consensus 269 ~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~g 348 (643)
++.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|+++.++|+++++.|++++.
T Consensus 5 ~P~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~--- 75 (451)
T cd07150 5 NPADGSVYARVAVGS------RQDAERAIAAAYDAFPAWAATTPSERERILLKAAEIMERRADDLIDLLIDEGGSTY--- 75 (451)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCH---
Confidence 466888899988887 88999999999999999999999999999999999999999999999887765432
Q ss_pred hhhHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHHHHHH
Q 006484 349 YAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAI 425 (643)
Q Consensus 349 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~~Al 425 (643)
.++. .++..+++.+++++...+. .+...+. ...+...+.+++|+|||++|+|| +|. +.++++++||
T Consensus 76 -~~a~--------~ev~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~AL 144 (451)
T cd07150 76 -GKAW--------FETTFTPELLRAAAGECRRVRGETLPS--DSPGTVSMSVRRPLGVVAGITPFNYPLILATKKVAFAL 144 (451)
T ss_pred -HHHH--------HHHHHHHHHHHHHHHHHHHhcCccccC--CCCCceeEEEEecccEEEEECCCccHHHHHHHHHHHHH
Confidence 2221 2344455555554433221 2222211 11244567889999999999998 586 5679999999
Q ss_pred HhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHHhc--
Q 006484 426 RSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 501 (643)
Q Consensus 426 aaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a-- 501 (643)
++||+||+|||+.+|.|+.++++++.+ + ||+|++|+|++ +.++++.|..||+||+|+||||+.+|+.|++.+
T Consensus 145 aaGN~VilKps~~~p~t~~~l~~~~~~----ag~P~g~v~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~ 220 (451)
T cd07150 145 AAGNTVVLKPSEETPVIGLKIAEIMEE----AGLPKGVFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAGR 220 (451)
T ss_pred hcCCeEEEECCccCcHHHHHHHHHHHH----hCCCcCcEEEeeCCCcHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh
Confidence 999999999999999999999999987 6 99999999995 566788888899999999999999999998776
Q ss_pred -CCCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC--------
Q 006484 502 -KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 571 (643)
Q Consensus 502 -~~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~-------- 571 (643)
.+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|++++|+|||+++| |+|+++|+++++++.+
T Consensus 221 ~~~~~~lelGG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~~~~g~p~~~~~ 299 (451)
T cd07150 221 HLKKITLELGGKNPLIVLADADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVY-DEFVKKFVARASKLKVGDPRDPDT 299 (451)
T ss_pred cCCceEeecCCCCeeEECCCCChHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHH-HHHHHHHHHHHHhcCCCCCCCCCC
Confidence 38999999999999999999999999999999999988 999999999999999 7999999999987632
Q ss_pred --------------------------EE-ecCccccccc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHHc
Q 006484 572 --------------------------GL-FGGPRASKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQ 617 (643)
Q Consensus 572 --------------------------~~-~g~~~~~~~~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~deAi~~aN~ 617 (643)
++ .|+.....++ | | +++.+++||+||||++|++|+|+||||+++|+
T Consensus 300 ~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~ 379 (451)
T cd07150 300 VIGPLISPRQVERIKRQVEDAVAKGAKLLTGGKYDGNFYQPTVLTDVTPDMRIFREETFGPVTSVIPAKDAEEALELAND 379 (451)
T ss_pred CCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCcEEcCEEEeCCCCCCHHHhCCCcCceEEEEEeCCHHHHHHHHhC
Confidence 11 1221111122 5 2 34789999999999999999999999999999
Q ss_pred cCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 618 HGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 618 ~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
++|||++||||+|.++++++++++++
T Consensus 380 ~~~gL~a~v~t~d~~~~~~~~~~l~~ 405 (451)
T cd07150 380 TEYGLSAAILTNDLQRAFKLAERLES 405 (451)
T ss_pred CCCCCeEEEEeCCHHHHHHHHHhcCc
Confidence 99999999999999999999999874
No 62
>cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA. Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis.
Probab=100.00 E-value=3e-62 Score=543.30 Aligned_cols=378 Identities=20% Similarity=0.225 Sum_probs=304.9
Q ss_pred chHHHHHHHHHHHcCC----cEEEEeCC-----CcchHHHHHc-CCceeeEEecCccccccHHhHHHHHHHHHHHHHHHh
Q 006484 239 MTAKVNAAYCAACAGI----PVVITSGF-----AMDSIIKVLE-GKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQ 308 (643)
Q Consensus 239 M~~Kl~aa~~a~~~gv----~v~I~~g~-----~~~~l~~~~~-g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~ 308 (643)
|..+++.++...+... +.+| +|. ..-...+|.+ |+.++++...+ .+++++++++|++||+.|+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~i-~g~~~~~~~~~~v~~P~t~~~~i~~~~~a~------~~~v~~av~~A~~A~~~W~ 86 (512)
T cd07124 14 NRAAFRAALARVREELGREYPLVI-GGKEVRTEEKIESRNPADPSEVLGTVQKAT------KEEAEAAVQAARAAFPTWR 86 (512)
T ss_pred HHHHHHHHHHHHHhhcccccceeE-CCEEecCCCeEEeECCCCCCceEEEEeCCC------HHHHHHHHHHHHHHHHHHh
Confidence 4455666655444432 2333 442 1123366776 88888888887 8899999999999999999
Q ss_pred cCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhhHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccc
Q 006484 309 ALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKR 387 (643)
Q Consensus 309 ~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g~~~~~ 387 (643)
++|..+|.++|++++++|+++.++|+++++.|++++. .++. .++..+++.++++++..+. .+...+.
T Consensus 87 ~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~----~ea~--------~ev~~~i~~~~~~~~~~~~~~~~~~~~ 154 (512)
T cd07124 87 RTPPEERARLLLRAAALLRRRRFELAAWMVLEVGKNW----AEAD--------ADVAEAIDFLEYYAREMLRLRGFPVEM 154 (512)
T ss_pred cCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCcCH----HHHH--------HHHHHHHHHHHHHHHHHHHhcCccccC
Confidence 9999999999999999999999999999887765542 2222 2344445555544432221 1222111
Q ss_pred cccCCCeeEEEEeeeeeeEEEEcCCC-ch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceE
Q 006484 388 TELADGLILEKTSCPLGVLLIVFESR-PD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIG 464 (643)
Q Consensus 388 ~~~~~~~~~~~~~~PlGvv~~I~p~~-P~-~~~~~~~~AlaaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~ 464 (643)
..+...+.+++|+|||++|+||| |. +.+++++|||++||+||+|||+.+|.++..+++++.+ + +|+|++|
T Consensus 155 ---~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~----aGlP~gvv~ 227 (512)
T cd07124 155 ---VPGEDNRYVYRPLGVGAVISPWNFPLAILAGMTTAALVTGNTVVLKPAEDTPVIAAKLVEILEE----AGLPPGVVN 227 (512)
T ss_pred ---CCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccccHHHHHHHHHHHH----hCcCCCceE
Confidence 12335678899999999999995 85 5679999999999999999999999999999999987 6 9999999
Q ss_pred eecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHHhc---------CCCEEEecCccceEEEcCCCCHHHHHHHHHhhc
Q 006484 465 LVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---------KIPVLGHADGICHVYVDKSANLDVAKNIVIDAK 534 (643)
Q Consensus 465 ~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a---------~~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~ 534 (643)
+|++ +.++++.|..||++|+|+||||+.+|+.|++.+ .+|+++|||||||+||++|||+|.|++.+++++
T Consensus 228 vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~~l~~~~lElgGk~p~iV~~daDl~~Aa~~i~~~~ 307 (512)
T cd07124 228 FLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYERAAKVQPGQKWLKRVIAEMGGKNAIIVDEDADLDEAAEGIVRSA 307 (512)
T ss_pred EeccCchHHHHHHhcCCCCCEEEEeCchHHHHHHHHHHhcccccccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHH
Confidence 9995 556778888899999999999999999998764 369999999999999999999999999999999
Q ss_pred CCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC---------------------------------EE-ecCccc
Q 006484 535 IDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV---------------------------------GL-FGGPRA 579 (643)
Q Consensus 535 ~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~---------------------------------~~-~g~~~~ 579 (643)
|.|+| .|+|++|+|||+++| |+|+++|+++++++.+ ++ +|+...
T Consensus 308 f~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~~~~g~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~g~~vl~gG~~~ 386 (512)
T cd07124 308 FGFQGQKCSACSRVIVHESVY-DEFLERLVERTKALKVGDPEDPEVYMGPVIDKGARDRIRRYIEIGKSEGRLLLGGEVL 386 (512)
T ss_pred HhhCCCccccceEEEEcHHHH-HHHHHHHHHHHHhCCCCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhCCEEEecCccC
Confidence 99998 999999999999999 7999999999887632 11 233221
Q ss_pred ----ccc-c-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 580 ----SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 580 ----~~~-~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
.++ + | | +++.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++
T Consensus 387 ~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~ 462 (512)
T cd07124 387 ELAAEGYFVQPTIFADVPPDHRLAQEEIFGPVLAVIKAKDFDEALEIANDTEYGLTGGVFSRSPEHLERARREFEV 462 (512)
T ss_pred CCCCCCceEcCEEEecCCCCChHHhCCCcCCeEEEEecCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCc
Confidence 233 3 5 2 3589999999999999999999999999999999999999999999999999999875
No 63
>cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like. NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism.
Probab=100.00 E-value=1.9e-62 Score=541.85 Aligned_cols=350 Identities=17% Similarity=0.198 Sum_probs=293.0
Q ss_pred HHHcCCceeeEEecCccccccHHhHHHHHHHHHHHHH---HHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Q 006484 269 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSR---RLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 345 (643)
Q Consensus 269 ~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~---~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~ 345 (643)
++.+|+.++++...+ .+++++++++|++||+ .|+++|.++|.++|++++++|+++.++|++++..|++++.
T Consensus 28 ~P~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~ 101 (481)
T cd07141 28 NPATGEKICEVQEGD------KADVDKAVKAARAAFKLGSPWRTMDASERGRLLNKLADLIERDRAYLASLETLDNGKPF 101 (481)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHhhccCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCch
Confidence 456788889887777 8899999999999998 6999999999999999999999999999998776654432
Q ss_pred HhchhhHHHHHhhcChhHHHHHHHHHHHHhcccccc-cccccccccCCCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHHH
Q 006484 346 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 422 (643)
Q Consensus 346 ~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~ 422 (643)
.+.. ..++..+++.++++++..+.. |...+. ..+...+.+++|+|||++|+|| ||. +.+++++
T Consensus 102 ----~~~~-------~~ev~~~~~~l~~~a~~~~~~~g~~~~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~ 167 (481)
T cd07141 102 ----SKSY-------LVDLPGAIKVLRYYAGWADKIHGKTIPM---DGDFFTYTRHEPVGVCGQIIPWNFPLLMAAWKLA 167 (481)
T ss_pred ----HHHH-------HHHHHHHHHHHHHHHHHHHHhcCceecC---CCCceEEEEEeceeEEEEEccChhHHHHHHHHHH
Confidence 1111 124566666666665543322 322211 1233457789999999999998 596 4579999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHHh
Q 006484 423 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 500 (643)
Q Consensus 423 ~AlaaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~ 500 (643)
+||++||+||+|||+.+|.|+..+++++.+ + ||+|++|+|++ +.++++.|..||+||+|+||||+.+|++|++.
T Consensus 168 ~ALaaGN~VVlKps~~~p~~~~~l~~~l~~----aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~ 243 (481)
T cd07141 168 PALACGNTVVLKPAEQTPLTALYLASLIKE----AGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKLIQQA 243 (481)
T ss_pred HHHHcCCEEEEeCCCCCcHHHHHHHHHHHH----cCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence 999999999999999999999999999987 7 99999999995 55677888889999999999999999999876
Q ss_pred cC----CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC----
Q 006484 501 TK----IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV---- 571 (643)
Q Consensus 501 a~----~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~---- 571 (643)
++ +|+++|||||||+||++|||++.|++.+++|+|.|+| .|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 244 aa~~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~G~p~ 322 (481)
T cd07141 244 AGKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQESIY-DEFVKRSVERAKKRVVGNPF 322 (481)
T ss_pred hhhhcCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCeEEEEcHHHH-HHHHHHHHHHHHhCCCCCCC
Confidence 53 7999999999999999999999999999999999998 999999999999999 7999999988876532
Q ss_pred ------------------------------EE-ecCccc--cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHH
Q 006484 572 ------------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 610 (643)
Q Consensus 572 ------------------------------~~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~de 610 (643)
++ +|+... .+ ++ | | +++++++||+||||++|++|+|+||
T Consensus 323 ~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~e 402 (481)
T cd07141 323 DPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRHGDKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIFKFKTIDE 402 (481)
T ss_pred CCCCCCcCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhccccCCeEEEEeeCCHHH
Confidence 11 233321 23 23 5 2 3578999999999999999999999
Q ss_pred HHHHHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 611 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 611 Ai~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
||+++|+++|||++||||+|.+++.+|++++++
T Consensus 403 ai~~~n~~~~gLs~~vft~d~~~a~~~~~~l~~ 435 (481)
T cd07141 403 VIERANNTTYGLAAAVFTKDIDKAITFSNALRA 435 (481)
T ss_pred HHHHHhCCCccceEEEECCCHHHHHHHHHhcCc
Confidence 999999999999999999999999999999875
No 64
>PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional
Probab=100.00 E-value=3.3e-62 Score=542.72 Aligned_cols=351 Identities=19% Similarity=0.248 Sum_probs=293.8
Q ss_pred HHHHH-cCCceeeEEecCccccccHHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Q 006484 267 IIKVL-EGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 345 (643)
Q Consensus 267 l~~~~-~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~ 345 (643)
..++. +|+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|+++.++|+++++.|.+++.
T Consensus 54 ~~~P~~t~~~i~~~~~a~------~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 127 (514)
T PRK03137 54 SINPANKSEVVGRVSKAT------KELAEKAMQAALEAFETWKKWSPEDRARILLRAAAIIRRRKHEFSAWLVKEAGKPW 127 (514)
T ss_pred eECCCCCCceEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCH
Confidence 35677 588889988888 89999999999999999999999999999999999999999999999887765432
Q ss_pred HhchhhHHHHHhhcChhHHHHHHHHHHHHhcccccc--cccccccccCCCeeEEEEeeeeeeEEEEcCCC-ch-hHHHHH
Q 006484 346 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI--GQILKRTELADGLILEKTSCPLGVLLIVFESR-PD-ALVQIA 421 (643)
Q Consensus 346 ~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~~-P~-~~~~~~ 421 (643)
.++. .++..+++.++++++..+.. +..... ..+...+++++|+|||++|+||| |. +.++++
T Consensus 128 ----~~a~--------~ev~~~~~~~~~~a~~~~~~~~~~~~~~---~~g~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i 192 (514)
T PRK03137 128 ----AEAD--------ADTAEAIDFLEYYARQMLKLADGKPVES---RPGEHNRYFYIPLGVGVVISPWNFPFAIMAGMT 192 (514)
T ss_pred ----HHHH--------HHHHHHHHHHHHHHHHHHHhcCCccccC---CCCceEEEEEecCcEEEEECCCccHHHHHHHHH
Confidence 2221 24555555555554332111 111111 12345678899999999999995 85 567899
Q ss_pred HHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHH
Q 006484 422 SLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKE 499 (643)
Q Consensus 422 ~~AlaaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~ 499 (643)
++||++||+||+|||+.+|.++..+++++.+ + +|+|++|+|++ +.++++.|..||+|++|+||||+.+|+.|++
T Consensus 193 ~~ALaaGN~VVlKPs~~tp~~a~~l~~~l~~----aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~ 268 (514)
T PRK03137 193 LAAIVAGNTVLLKPASDTPVIAAKFVEVLEE----AGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIYE 268 (514)
T ss_pred HHHHHcCCEEEEECCCCCcHHHHHHHHHHHH----hCCCCCcEEEeecCchHHHHHHhcCCCcCEEEEECCcHHHHHHHH
Confidence 9999999999999999999999999999987 6 99999999995 5567787888999999999999999999988
Q ss_pred hcC---------CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHc
Q 006484 500 STK---------IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHE 569 (643)
Q Consensus 500 ~a~---------~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~ 569 (643)
.++ ||+++|||||||+||++|||+|.|++.+++++|.|+| .|+|++|+|||+++| |+|+++|+++++++
T Consensus 269 ~aa~~~~~~~~l~~v~lElgGk~~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~-d~f~~~l~~~~~~l 347 (514)
T PRK03137 269 RAAKVQPGQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIVHEDVY-DEVLEKVVELTKEL 347 (514)
T ss_pred HHhcccccccccceEEecCCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCccCeEEEEeHHHH-HHHHHHHHHHHHhC
Confidence 763 6999999999999999999999999999999999998 999999999999999 79999999998876
Q ss_pred CCE---------------------------------EecCccc--cc-cc-c-C-----CCCccccccccCceEEEEEeC
Q 006484 570 GVG---------------------------------LFGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVD 606 (643)
Q Consensus 570 ~~~---------------------------------~~g~~~~--~~-~~-p-v-----~~~~~~~eE~FgPvl~v~~~~ 606 (643)
.+. ++|+... .+ ++ | | +++++++||+||||++|++|+
T Consensus 348 ~~g~p~~~~~~Gpli~~~~~~~v~~~v~~a~~~~~vl~Gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~ 427 (514)
T PRK03137 348 TVGNPEDNAYMGPVINQASFDKIMSYIEIGKEEGRLVLGGEGDDSKGYFIQPTIFADVDPKARIMQEEIFGPVVAFIKAK 427 (514)
T ss_pred CCCCCCCccCcCCCCCHHHHHHHHHHHHHHHhCCEEEeCCCcCCCCceEEeeEEEeCCCCCCHHHhCCCCCceEEEEecC
Confidence 321 1233211 12 23 5 2 357899999999999999999
Q ss_pred CHHHHHHHHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 607 DVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 607 ~~deAi~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
|+||||+++|+++|||++||||+|.++++++++++++
T Consensus 428 ~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~ 464 (514)
T PRK03137 428 DFDHALEIANNTEYGLTGAVISNNREHLEKARREFHV 464 (514)
T ss_pred CHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCc
Confidence 9999999999999999999999999999999999874
No 65
>TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative. This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs.
Probab=100.00 E-value=3.3e-62 Score=542.40 Aligned_cols=351 Identities=17% Similarity=0.186 Sum_probs=291.7
Q ss_pred HHHH-cCCceeeEEecCccccccHHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Q 006484 268 IKVL-EGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 346 (643)
Q Consensus 268 ~~~~-~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~ 346 (643)
.++. +++.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|++|+++|+++++.|.+++.
T Consensus 51 ~~P~~~~~~i~~~~~~~------~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~- 123 (511)
T TIGR01237 51 INPCDPSEVVGKVGKAS------VEQAEHALQIAKKAFEAWKKTPVRERAGILRKAAAIMERRRHELNALICLEVGKII- 123 (511)
T ss_pred ECCCCCCcEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCH-
Confidence 4556 377788877777 88999999999999999999999999999999999999999999998887765432
Q ss_pred hchhhHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCeeEEEEeeeeeeEEEEcCCC-ch-hHHHHHHH
Q 006484 347 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFESR-PD-ALVQIASL 423 (643)
Q Consensus 347 ~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~~-P~-~~~~~~~~ 423 (643)
.++. .++..+++.++++++..+. .+..... ...+...+++|+|+|||++|+||| |. +.+++++|
T Consensus 124 ---~~a~--------~ev~~~~~~~~~~a~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~i~~ 190 (511)
T TIGR01237 124 ---PEAD--------AEVAEAIDFCEYYAREMERLAGQGVNL--DIEGETNRYFYQPRGVAVVISPWNFPMAIAVGMTVA 190 (511)
T ss_pred ---HHHH--------HHHHHHHHHHHHHHHHHHHhcCccccC--CCCCceeEEEEecceeEEEECCCCcHHHHHHHHHHH
Confidence 1221 2455555555555433221 1221111 112344577899999999999994 85 56799999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHHhc
Q 006484 424 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 501 (643)
Q Consensus 424 AlaaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a 501 (643)
||++||+||+|||+.+|+++..+++++.+ + +|+|++|+|++ +.++++.|..||++++|+||||+.+|+.|++.+
T Consensus 191 ALaaGN~VVlKPs~~tp~~~~~l~~~~~~----aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~a 266 (511)
T TIGR01237 191 PIVTGNCVVLKPAETSTVIAAKIVEILIE----AGLPPGVFQFVPGKGSEVGSYLVNHPKTHLITFTGSREVGCRIYEDA 266 (511)
T ss_pred HHHcCCEEEEECCCCCcHHHHHHHHHHHH----hCCCCCcEEEccCCCchhHHHHhcCCCCCeEEEECchHHHHHHHHHH
Confidence 99999999999999999999999999987 6 99999999995 556788888899999999999999999998765
Q ss_pred C---------CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC
Q 006484 502 K---------IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV 571 (643)
Q Consensus 502 ~---------~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~ 571 (643)
. +|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 267 a~~~~~~~~~~~~~lElgG~~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~L~~~~~~l~~ 345 (511)
T TIGR01237 267 AKVQPGQKHLKRVIAEMGGKDAIIVDESADIEQAVAGAVYSAFGFTGQKCSACSRVVVLSPVY-DAVVERFVEATRSLNV 345 (511)
T ss_pred hcccccccccceeEeccCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCcccceEEEEehhHH-HHHHHHHHHHHHhCCC
Confidence 3 6999999999999999999999999999999999998 999999999999999 7999999999887632
Q ss_pred E----------------------------------EecCccc--ccc-c-c-C-----CCCccccccccCceEEEEEeCC
Q 006484 572 G----------------------------------LFGGPRA--SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDD 607 (643)
Q Consensus 572 ~----------------------------------~~g~~~~--~~~-~-p-v-----~~~~~~~eE~FgPvl~v~~~~~ 607 (643)
. +.|+... .++ + | | ++|++++||+||||++|++|+|
T Consensus 346 g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~g~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPVl~v~~~~~ 425 (511)
T TIGR01237 346 GPTDDPSTQVGPVIDQKSQAKIQEYIEQGKAEGELAIGGCDAPSEGYFIGPTIFKDVDRHARLAQEEIFGPVVAIIRAAD 425 (511)
T ss_pred CCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCcEEECCccCCCCCeEEcCEEEeCCCCCChHhhCCCcCCeEEEEeeCC
Confidence 1 1233211 122 3 5 2 3578999999999999999999
Q ss_pred HHHHHHHHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 608 VRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 608 ~deAi~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
+||||+++|+++|||++||||+|.+++.++++++++
T Consensus 426 ~deai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~ 461 (511)
T TIGR01237 426 FDEALEIANGTEYGLTGGVYSNTRDHIERAAAEFEV 461 (511)
T ss_pred HHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCc
Confidence 999999999999999999999999999999999875
No 66
>cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like. Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase.
Probab=100.00 E-value=2e-62 Score=537.81 Aligned_cols=349 Identities=21% Similarity=0.246 Sum_probs=293.1
Q ss_pred HHcCCceeeEEecCccccccHHhHHHHHHHHHHHHHH--HhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Q 006484 270 VLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRR--LQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (643)
Q Consensus 270 ~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~--w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~ 347 (643)
|.+|+.++++...+ .+++++++++|++||+. |+++|.++|.++|++++++|++|.++|++++..|++++.
T Consensus 4 P~t~~~i~~~~~~~------~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~-- 75 (454)
T cd07118 4 PAHGVVVARYAEGT------VEDVDAAVAAARKAFDKGPWPRMSGAERAAVLLKVADLIRARRERLALIETLESGKPI-- 75 (454)
T ss_pred CCCCCEEEEEeCCC------HHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH--
Confidence 56788899988888 88999999999999985 999999999999999999999999999998887765432
Q ss_pred chhhHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHHHHH
Q 006484 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 424 (643)
Q Consensus 348 g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~~A 424 (643)
.++ ..+++.+++.+++++...+. .+...+. ...+...++.|+|+|||++|+|| ||. ++++++++|
T Consensus 76 --~~a--------~~ev~~~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~i~~A 143 (454)
T cd07118 76 --SQA--------RGEIEGAADLWRYAASLARTLHGDSYNN--LGDDMLGLVLREPIGVVGIITPWNFPFLILSQKLPFA 143 (454)
T ss_pred --HHH--------HHHHHHHHHHHHHHHHHHHHhcCccccc--CCCCceeeEEeecceEEEEECCCCcHHHHHHHHHHHH
Confidence 122 23566666666665543221 1222211 11233456789999999999998 585 567999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHHhc-
Q 006484 425 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 501 (643)
Q Consensus 425 laaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a- 501 (643)
|++||+||+|||+.+|.++.++++++.+ + +|+|++|+|++ +.++++.|..||+||+|+||||+++|+.|++.+
T Consensus 144 LaaGN~Vi~Kps~~~p~~~~~l~~~~~~----aG~P~g~~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa 219 (454)
T cd07118 144 LAAGCTVVVKPSEFTSGTTLMLAELLIE----AGLPAGVVNIVTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAA 219 (454)
T ss_pred HhcCCEEEEECCCCCcHHHHHHHHHHHh----cCCCccceEEEecCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHH
Confidence 9999999999999999999999999987 7 99999999995 555777788899999999999999999998876
Q ss_pred --CCCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC-------
Q 006484 502 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 571 (643)
Q Consensus 502 --~~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~------- 571 (643)
.+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 220 ~~~~~~~lelgG~n~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~L~~~~~~l~~g~p~~~~ 298 (454)
T cd07118 220 RNLKKVSLELGGKNPQIVFADADLDAAADAVVFGVYFNAGECCNSGSRLLVHESIA-DAFVAAVVARSRKVRVGDPLDPE 298 (454)
T ss_pred hcCCcEEeccCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHH-HHHHHHHHHHHHhcCcCCCCCCC
Confidence 38999999999999999999999999999999999988 999999999999999 7999999999887632
Q ss_pred ---------------------------EE-ecCccc---ccc-c-c-C-----CCCccccccccCceEEEEEeCCHHHHH
Q 006484 572 ---------------------------GL-FGGPRA---SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAI 612 (643)
Q Consensus 572 ---------------------------~~-~g~~~~---~~~-~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~deAi 612 (643)
++ +|+... .++ + | | +++.+++||+||||++|++|+|+||||
T Consensus 299 ~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai 378 (454)
T cd07118 299 TKVGAIINEAQLAKITDYVDAGRAEGATLLLGGERLASAAGLFYQPTIFTDVTPDMAIAREEIFGPVLSVLTFDTVDEAI 378 (454)
T ss_pred CcCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCeEEeCEEEeCCCCCCHHHhCCCCCceEEEEEECCHHHHH
Confidence 11 233221 122 3 5 2 357899999999999999999999999
Q ss_pred HHHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 613 DHIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 613 ~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
+++|+++|||++||||+|.++++++++++++
T Consensus 379 ~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~ 409 (454)
T cd07118 379 ALANDTVYGLSAGVWSKDIDTALTVARRIRA 409 (454)
T ss_pred HHHhCCCccceEEEECCCHHHHHHHHHhcCc
Confidence 9999999999999999999999999999874
No 67
>cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins. The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD.
Probab=100.00 E-value=3.8e-62 Score=536.36 Aligned_cols=353 Identities=19% Similarity=0.198 Sum_probs=291.4
Q ss_pred HHHcCCceeeEEecCccccccHHhHHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Q 006484 269 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQ-ALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (643)
Q Consensus 269 ~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~-~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~ 347 (643)
+|.+|+.++++...+ .+++++++++|++||+.|+ ++|..+|.++|++++++|+++.++|++++..|++++..
T Consensus 3 ~P~tg~~i~~~~~~~------~~~v~~av~~A~~a~~~w~w~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~- 75 (459)
T cd07089 3 NPATEEVIGTAPDAG------AADVDAAIAAARRAFDTGDWSTDAEERARCLRQLHEALEARKEELRALLVAEVGAPVM- 75 (459)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH-
Confidence 356788888887777 8899999999999999999 99999999999999999999999999998877655421
Q ss_pred chhhHHHHHhhcChhHHHHHHHHHHHHhcccccc-ccc-ccccc-cCCCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHHH
Q 006484 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQI-LKRTE-LADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 422 (643)
Q Consensus 348 g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-g~~-~~~~~-~~~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~ 422 (643)
++.. .++..+++.++++++..+.. +.. .+... ...+...+++|+|+|||++|+|| ||. +.+++++
T Consensus 76 ---~~~~-------~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~~~ 145 (459)
T cd07089 76 ---TARA-------MQVDGPIGHLRYFADLADSFPWEFDLPVPALRGGPGRRVVRREPVGVVAAITPWNFPFFLNLAKLA 145 (459)
T ss_pred ---HHHH-------HHHHHHHHHHHHHHHHHHHhcCceecCcccccCCCceeEEEEeeccEEEEEcCCchHHHHHHHHHH
Confidence 1111 23444444444444322111 111 11100 01234567899999999999998 485 5679999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHHh
Q 006484 423 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 500 (643)
Q Consensus 423 ~AlaaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~ 500 (643)
+||++||+||+|||+.+|.++..+.+++.+ + ||+|++|+|++ +.+++..|..||++++|+||||+.+|+.|++.
T Consensus 146 ~AL~aGN~vvlKps~~~p~~~~~l~~~~~~----aglP~g~~~~v~g~~~~~~~~l~~~~~~~~v~ftGs~~~g~~v~~~ 221 (459)
T cd07089 146 PALAAGNTVVLKPAPDTPLSALLLGEIIAE----TDLPAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQ 221 (459)
T ss_pred HHHHcCCEEEEECCCCChHHHHHHHHHHHH----cCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence 999999999999999999999999999987 6 99999999995 55577778889999999999999999999987
Q ss_pred c---CCCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC-----
Q 006484 501 T---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV----- 571 (643)
Q Consensus 501 a---~~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~----- 571 (643)
+ .+|+++|||||||+||++|||+|.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++++
T Consensus 222 aa~~~~~~~lelgG~n~~iV~~dadl~~aa~~i~~~~~~~sGQ~C~a~~~v~V~~~v~-~~f~~~l~~~~~~~~~g~p~~ 300 (459)
T cd07089 222 AAATLKRVLLELGGKSANIVLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRY-DEVVEALAAAFEALPVGDPAD 300 (459)
T ss_pred HHhcCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCcccCCeEEEEcHHHH-HHHHHHHHHHHHhCCCCCCCC
Confidence 7 38999999999999999999999999999999999987 999999999999999 7999999999887632
Q ss_pred -----------------------------EE-ecCccc----cc-cc-c-C-----CCCccccccccCceEEEEEeCCHH
Q 006484 572 -----------------------------GL-FGGPRA----SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 609 (643)
Q Consensus 572 -----------------------------~~-~g~~~~----~~-~~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~d 609 (643)
++ +|+... .+ ++ | | +++++++||+||||++|++|+|+|
T Consensus 301 ~~~~~gp~i~~~~~~~v~~~i~~a~~~Ga~~l~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~d 380 (459)
T cd07089 301 PGTVMGPLISAAQRDRVEGYIARGRDEGARLVTGGGRPAGLDKGFYVEPTLFADVDNDMRIAQEEIFGPVLVVIPYDDDD 380 (459)
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEECCEEEEcCCCCCHHHhCCCcCceEEEeccCCHH
Confidence 11 233221 13 23 5 2 357899999999999999999999
Q ss_pred HHHHHHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 610 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 610 eAi~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
|||+++|+++|||++||||+|.+++.+|++++++
T Consensus 381 eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~~~~ 414 (459)
T cd07089 381 EAVRIANDSDYGLSGGVWSADVDRAYRVARRIRT 414 (459)
T ss_pred HHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhcCc
Confidence 9999999999999999999999999999999874
No 68
>cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA. The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes.
Probab=100.00 E-value=5.5e-62 Score=541.47 Aligned_cols=376 Identities=19% Similarity=0.187 Sum_probs=303.3
Q ss_pred HHHHHHHHHcCCc--EEEEeCCC--c---chHHHHHc-CCceeeEEecCccccccHHhHHHHHHHHHHHHHHHhcCCHHH
Q 006484 243 VNAAYCAACAGIP--VVITSGFA--M---DSIIKVLE-GKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQD 314 (643)
Q Consensus 243 l~aa~~a~~~gv~--v~I~~g~~--~---~~l~~~~~-g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~ 314 (643)
++.++...+.+.+ +.+++|.. . -.+.+|.+ |+.++++...+ .+++++++++|++||+.|+.++.++
T Consensus 19 ~~~~~~~~~~~~~~~~p~i~g~~~~~~~~~~v~~P~t~g~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~ 92 (518)
T cd07125 19 LADALKAFDEKEWEAIPIINGEETETGEGAPVIDPADHERTIGEVSLAD------AEDVDAALAIAAAAFAGWSATPVEE 92 (518)
T ss_pred HHHHHHHhhhcCcccCceECCEEeeCCCeEEEECCCCCCceEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHH
Confidence 3445555555432 55555442 1 12366788 88889988888 8899999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhhHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCC
Q 006484 315 RRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADG 393 (643)
Q Consensus 315 R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~ 393 (643)
|.++|++++++|+++.++|+++++.|++++.. ++. .++..+++.++++++..+. .+.... ..+.+
T Consensus 93 R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~----~a~--------~ev~~~i~~l~~~~~~~~~~~~~~~~--~~~~g 158 (518)
T cd07125 93 RAEILEKAADLLEANRGELIALAAAEAGKTLA----DAD--------AEVREAIDFCRYYAAQARELFSDPEL--PGPTG 158 (518)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH----HHH--------HHHHHHHHHHHHHHHHHHHhcCCccc--cCCCC
Confidence 99999999999999999999998877755432 221 2344444444444432211 111110 11223
Q ss_pred eeEEEEeeeeeeEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecC-c
Q 006484 394 LILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-R 469 (643)
Q Consensus 394 ~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~~AlaaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~-~ 469 (643)
...+.+++|+|||++|+|| +|. +.++++++||++||+||+|||+.||+++.++++++.+ + ||+|++|+|++ +
T Consensus 159 ~~~~~~~~P~GVV~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~ll~e----aGlP~gvv~vv~g~~ 234 (518)
T cd07125 159 ELNGLELHGRGVFVCISPWNFPLAIFTGQIAAALAAGNTVIAKPAEQTPLIAARAVELLHE----AGVPRDVLQLVPGDG 234 (518)
T ss_pred ceeEEEEecccEEEEECCcchHHHHHHHHHHHHHHcCCEEEEeCCCcCcHHHHHHHHHHHH----cCCCCCcEEEEecCc
Confidence 4457789999999999999 585 5678999999999999999999999999999999987 7 99999999995 4
Q ss_pred chHhHhhhCCCCccEEEeecCHHHHHHHHHhc------CCCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccc
Q 006484 470 EEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST------KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACN 542 (643)
Q Consensus 470 ~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a------~~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~ 542 (643)
..+++.|..||+||+|+||||+.+|++|++.+ .+|+++|||||||+||++|||+|+|++.+++|+|.|+| +|+
T Consensus 235 ~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~iv~g~f~nsGQ~C~ 314 (518)
T cd07125 235 EEIGEALVAHPRIDGVIFTGSTETAKLINRALAERDGPILPLIAETGGKNAMIVDSTALPEQAVKDVVQSAFGSAGQRCS 314 (518)
T ss_pred hhhHHHHhcCCCcCEEEEECCHHHHHHHHHHhhhccCCCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCC
Confidence 45777788899999999999999999998864 37999999999999999999999999999999999998 999
Q ss_pred cceeEEEcCccCCchhHHHHHHHHHHcCCE----------------------------------EecCccc--cc-cc-c
Q 006484 543 AMETLLVHKDLACNGALNELVVELQHEGVG----------------------------------LFGGPRA--SK-LL-Q 584 (643)
Q Consensus 543 a~~rv~V~~~i~~~~f~~~l~~~~~~~~~~----------------------------------~~g~~~~--~~-~~-p 584 (643)
|++|+|||+++| |+|+++|+++++++++. ++|+... .+ ++ |
T Consensus 315 a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~~~vl~gg~~~~~~g~~~~P 393 (518)
T cd07125 315 ALRLLYLQEEIA-ERFIEMLKGAMASLKVGDPWDLSTDVGPLIDKPAGKLLRAHTELMRGEAWLIAPAPLDDGNGYFVAP 393 (518)
T ss_pred CCeEEEEcchhH-HHHHHHHHHHHhcCCccCCCCCCCCcCCCcCHHHHHHHHHHHHHHHhCCEEEeCCCcCCCCCeEEcc
Confidence 999999999999 79999999998876321 1122211 12 22 5
Q ss_pred -C---CCCccccccccCceEEEEEeC--CHHHHHHHHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 585 -I---PETRLFHHEYNSMVCTVEIVD--DVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 585 -v---~~~~~~~eE~FgPvl~v~~~~--~~deAi~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
| .+|++++||+||||++|++|+ |+||||+++|+++|||++||||+|.+++++|++++++
T Consensus 394 tvl~~v~~~i~~eE~FgPVl~v~~~~~~~~deAi~~~n~~~~gLta~Vft~d~~~~~~~~~~l~~ 458 (518)
T cd07125 394 GIIEIVGIFDLTTEVFGPILHVIRFKAEDLDEAIEDINATGYGLTLGIHSRDEREIEYWRERVEA 458 (518)
T ss_pred EEEeecCChHhhCcccCCeEEEEEeCCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCc
Confidence 2 268999999999999999999 9999999999999999999999999999999999874
No 69
>cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like. NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD.
Probab=100.00 E-value=3.8e-62 Score=537.18 Aligned_cols=350 Identities=21% Similarity=0.236 Sum_probs=292.4
Q ss_pred HHHcCCceeeEEecCccccccHHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhc
Q 006484 269 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 348 (643)
Q Consensus 269 ~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~g 348 (643)
+|.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|++|.++|++++..|++++..
T Consensus 3 ~P~t~~~~~~~~~~~------~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~-- 74 (457)
T cd07108 3 NPATGQVIGEVPRSR------AADVDRAVAAAKAAFPEWAATPARERGKLLARIADALEARSEELARLLALETGNALR-- 74 (457)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCcH--
Confidence 356788889987777 889999999999999999999999999999999999999999999999877755310
Q ss_pred hhhHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHHHHHH
Q 006484 349 YAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAI 425 (643)
Q Consensus 349 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~~Al 425 (643)
.++ ..++..+++.+++++++... .+...+. ..+...+..++|+|||++|+|| ||. +.++++++||
T Consensus 75 -~~a--------~~ev~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~AL 142 (457)
T cd07108 75 -TQA--------RPEAAVLADLFRYFGGLAGELKGETLPF---GPDVLTYTVREPLGVVGAILPWNAPLMLAALKIAPAL 142 (457)
T ss_pred -HHH--------HHHHHHHHHHHHHHHHHHHHhCCceecc---CCCeeEEEEeecceEEEEECCCchHHHHHHHHHHHHH
Confidence 111 12455566666665543321 1222221 1234567789999999999999 485 5678999999
Q ss_pred HhCCEEEEeCCcchHHHHHHHHHHHHHhcccccCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHHhcC--
Q 006484 426 RSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK-- 502 (643)
Q Consensus 426 aaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~alP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a~-- 502 (643)
++||+||+|||+.+|.++.++++++.+ ++|+|++|+|++ +.++++.|..||++|+|+||||+.+|+.|++.+.
T Consensus 143 aaGN~VVlKps~~~p~~~~~l~~~~~~----~lP~~~~~~v~g~~~~~~~~L~~~~~vd~v~ftGs~~~g~~v~~~aa~~ 218 (457)
T cd07108 143 VAGNTVVLKAAEDAPLAVLLLAEILAQ----VLPAGVLNVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAADR 218 (457)
T ss_pred HcCCEEEEECCCCCcHHHHHHHHHHHH----hCCcCcEEEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHhcc
Confidence 999999999999999999999999986 499999999995 4557777778999999999999999999998773
Q ss_pred -CCEEEecCccceEEEcCCCCHHHHHHHHHhhc-CCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC--------
Q 006484 503 -IPVLGHADGICHVYVDKSANLDVAKNIVIDAK-IDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 571 (643)
Q Consensus 503 -~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~-~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~-------- 571 (643)
+|+++|||||||+||++|||+|.|++.+++|+ |.|+| +|+|++|+|||+++| |+|+++|+++++++++
T Consensus 219 l~~~~lelgG~~~~iV~~dAdl~~Aa~~iv~~~~f~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~~~vg~p~~~~~ 297 (457)
T cd07108 219 LIPVSLELGGKSPMIVFPDADLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIY-DAFLEKLVAKLSKLKIGDPLDEAT 297 (457)
T ss_pred CCeEEEECCCCCeeEECCCCCHHHHHHHHHHhhHhhcCCCCCCCCeEEEEehHHH-HHHHHHHHHHHhhCCCCCCCCCCC
Confidence 89999999999999999999999999999994 99887 999999999999999 7999999998876532
Q ss_pred ---------------------------EE-ecCccc------cccc--c-C-----CCCccccccccCceEEEEEeCCHH
Q 006484 572 ---------------------------GL-FGGPRA------SKLL--Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 609 (643)
Q Consensus 572 ---------------------------~~-~g~~~~------~~~~--p-v-----~~~~~~~eE~FgPvl~v~~~~~~d 609 (643)
++ +|+... .++| | | +++.+++||+||||++|++|+|+|
T Consensus 298 ~~gpli~~~~~~~~~~~i~~a~~~~ga~vl~gG~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~ 377 (457)
T cd07108 298 DIGAIISEKQFAKVCGYIDLGLSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDNEWRLAREEIFGPVLCAIPWKDED 377 (457)
T ss_pred CcCCCCCHHHHHHHHHHHHHHHhCCCCEEEeCCCcCccCCCCCceEECCEEEecCCCCChhhhcCCCCceEEeecCCCHH
Confidence 11 233221 1222 5 2 357899999999999999999999
Q ss_pred HHHHHHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 610 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 610 eAi~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
|||+++|+++|||++||||+|.+++++|++++++
T Consensus 378 eai~~~n~~~~gLs~~vft~d~~~a~~~~~~l~~ 411 (457)
T cd07108 378 EVIAMANDSHYGLAAYVWTRDLGRALRAAHALEA 411 (457)
T ss_pred HHHHHHhCCCcCceeEEEcCCHHHHHHHHHhcCc
Confidence 9999999999999999999999999999999875
No 70
>cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like. Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation.
Probab=100.00 E-value=6.1e-62 Score=536.68 Aligned_cols=356 Identities=20% Similarity=0.220 Sum_probs=292.8
Q ss_pred HHcCCceeeEEecCccccccHHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhch
Q 006484 270 VLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGY 349 (643)
Q Consensus 270 ~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~g~ 349 (643)
|.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|+++.++|+++++.|++++ +
T Consensus 3 P~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----~ 72 (465)
T cd07098 3 PATGQHLGSVPADT------PEDVDEAIAAARAAQREWAKTSFAERRKVLRSLLKYILENQEEICRVACRDTGKT----M 72 (465)
T ss_pred CCCCCeeEEeeCCC------HHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCC----H
Confidence 56788899988887 8899999999999999999999999999999999999999999999888776543 2
Q ss_pred hhHHHHHhhcChhHHHHHHHHHHHHhccccc-c-cccccccccCCCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHHHHHH
Q 006484 350 AKSLVSRLALKPGKISSLAKSIRILADMEEP-I-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAI 425 (643)
Q Consensus 350 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~-g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~~Al 425 (643)
.++... ++..+++.++++++..+. . +...+......+...+++++|+|||++|+|| +|. ..++++++||
T Consensus 73 ~~a~~~-------e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n~P~~~~~~~~~~AL 145 (465)
T cd07098 73 VDASLG-------EILVTCEKIRWTLKHGEKALRPESRPGGLLMFYKRARVEYEPLGVVGAIVSWNYPFHNLLGPIIAAL 145 (465)
T ss_pred HHHHHH-------HHHHHHHHHHHHHHHHHHHhCCcccCCccccCCceeEEEEecceeEEEEcccCcHHHHHHHHHHHHH
Confidence 233222 344444444444322111 0 1111100001123456789999999999998 485 5568999999
Q ss_pred HhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecCcchHhHhhhCCCCccEEEeecCHHHHHHHHHhc---
Q 006484 426 RSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST--- 501 (643)
Q Consensus 426 aaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a--- 501 (643)
++||+||+|||+++|+|+..+++++.+++.++ +|+|++|+|+++.++++.|..||+|++|+||||+.+|++|++.+
T Consensus 146 aaGN~VIlKps~~~p~~~~~~~~~~~~~l~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~v~~~a~~~ 225 (465)
T cd07098 146 FAGNAIVVKVSEQVAWSSGFFLSIIRECLAACGHDPDLVQLVTCLPETAEALTSHPVIDHITFIGSPPVGKKVMAAAAES 225 (465)
T ss_pred HcCCEEEEECCCcCcHHHHHHHHHHHHHHHhcCCCCCeEEEEECCHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhc
Confidence 99999999999999999999999999988889 99999999996446777788899999999999999999998876
Q ss_pred CCCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC---------
Q 006484 502 KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV--------- 571 (643)
Q Consensus 502 ~~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~--------- 571 (643)
.+|+++|+|||||+||++|||+|.|++.+++|+|.|+| .|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 226 ~~~~~lelgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~L~~~~~~l~~G~p~~~~~~ 304 (465)
T cd07098 226 LTPVVLELGGKDPAIVLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIY-DKLLEILTDRVQALRQGPPLDGDVD 304 (465)
T ss_pred CCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEcHHHH-HHHHHHHHHHHHhcCCCCCCCCCCC
Confidence 49999999999999999999999999999999999988 999999999999999 7999999998876521
Q ss_pred -------------------------EE-ecCccc------ccc-c-c-C-----CCCccccccccCceEEEEEeCCHHHH
Q 006484 572 -------------------------GL-FGGPRA------SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAA 611 (643)
Q Consensus 572 -------------------------~~-~g~~~~------~~~-~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~deA 611 (643)
++ .|+... .+. + | | +++.+++||+||||++|++|+|+|||
T Consensus 305 ~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ea 384 (465)
T cd07098 305 VGAMISPARFDRLEELVADAVEKGARLLAGGKRYPHPEYPQGHYFPPTLLVDVTPDMKIAQEEVFGPVMVVMKASDDEEA 384 (465)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCcCcCCCCcEEcCEEEeCCCCCCHHHhCCCcCCeEEEEEeCCHHHH
Confidence 22 233211 122 2 5 2 34789999999999999999999999
Q ss_pred HHHHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 612 IDHIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 612 i~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
|+++|+++|||+++|||+|.+++.++++++++
T Consensus 385 i~~~n~~~~gLsa~i~t~d~~~~~~~~~~l~~ 416 (465)
T cd07098 385 VEIANSTEYGLGASVFGKDIKRARRIASQLET 416 (465)
T ss_pred HHHHhCCCCCceEEEEcCCHHHHHHHHHhCCc
Confidence 99999999999999999999999999999874
No 71
>cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins. ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences.
Probab=100.00 E-value=8.7e-62 Score=534.08 Aligned_cols=352 Identities=21% Similarity=0.271 Sum_probs=292.6
Q ss_pred HHHcCCceeeEEecCccccccHHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhc
Q 006484 269 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 348 (643)
Q Consensus 269 ~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~g 348 (643)
+|.+|+.++++...+ .+++++++++|++||+.|+++|..+|.++|++++++|+++.++|++++..|++++..
T Consensus 5 ~P~t~~~~~~~~~~~------~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~-- 76 (453)
T cd07094 5 NPYDGEVIGKVPADD------RADAEEALATARAGAENRRALPPHERMAILERAADLLKKRAEEFAKIIACEGGKPIK-- 76 (453)
T ss_pred CCCCCCEEEEEcCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH--
Confidence 467888889987777 889999999999999999999999999999999999999999999998877654422
Q ss_pred hhhHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccc--cccCCCeeEEEEeeeeeeEEEEcCCC-ch-hHHHHHHH
Q 006484 349 YAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKR--TELADGLILEKTSCPLGVLLIVFESR-PD-ALVQIASL 423 (643)
Q Consensus 349 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g~~~~~--~~~~~~~~~~~~~~PlGvv~~I~p~~-P~-~~~~~~~~ 423 (643)
++. .++..+++.++++++..+. .+...+. +....+...+++++|+|||++|+||| |. +.++++++
T Consensus 77 --~a~--------~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ 146 (453)
T cd07094 77 --DAR--------VEVDRAIDTLRLAAEEAERIRGEEIPLDATQGSDNRLAWTIREPVGVVLAITPFNFPLNLVAHKLAP 146 (453)
T ss_pred --HHH--------HHHHHHHHHHHHHHHHHHHhcCccccccccccCCCceEEEEEeccceEEEECCCccHHHHHHHHHHH
Confidence 221 2344444555544332211 1221111 00112445678899999999999994 84 56789999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHHhc
Q 006484 424 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 501 (643)
Q Consensus 424 AlaaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a 501 (643)
||++||+||+|||+.+|.++.++++++.+ + +|+|++|+|++ +.++++.|..||++|+|+||||+.+|+.|++.+
T Consensus 147 AL~aGN~VI~Kps~~~p~~~~~l~~~l~~----ag~P~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a 222 (453)
T cd07094 147 AIATGCPVVLKPASKTPLSALELAKILVE----AGVPEGVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEALRANA 222 (453)
T ss_pred HHHcCCEEEEECCCcchHHHHHHHHHHHH----cCCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHc
Confidence 99999999999999999999999999987 6 99999999995 556677788899999999999999999999887
Q ss_pred -CCCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC--------
Q 006484 502 -KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 571 (643)
Q Consensus 502 -~~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~-------- 571 (643)
.+|+++|+|||||+||++|||+|.|++.+++++|.|+| .|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 223 ~~~~~~lelGGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~i~V~~~i~-d~f~~~L~~~~~~~~~g~p~~~~~ 301 (453)
T cd07094 223 GGKRIALELGGNAPVIVDRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELY-DEFIEAFVAAVKKLKVGDPLDEDT 301 (453)
T ss_pred CCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhcCCCCcCCeEEEEeHHHH-HHHHHHHHHHHHhccCCCCCCCCC
Confidence 48999999999999999999999999999999999998 999999999999999 7999999999876532
Q ss_pred --------------------------EE-ecCccccccc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHHc
Q 006484 572 --------------------------GL-FGGPRASKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQ 617 (643)
Q Consensus 572 --------------------------~~-~g~~~~~~~~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~deAi~~aN~ 617 (643)
++ .|+.....++ | | ++|++++||+||||++|++|+|+||||+++|+
T Consensus 302 ~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~g~~~~Ptvl~~~~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~ 381 (453)
T cd07094 302 DVGPLISEEAAERVERWVEEAVEAGARLLCGGERDGALFKPTVLEDVPRDTKLSTEETFGPVVPIIRYDDFEEAIRIANS 381 (453)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCccCCCeEEeCEEEeCCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhC
Confidence 11 1222211223 5 2 35899999999999999999999999999999
Q ss_pred cCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 618 HGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 618 ~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
++|||++||||+|.+++.++++++++
T Consensus 382 ~~~gL~~~i~t~d~~~a~~~~~~l~~ 407 (453)
T cd07094 382 TDYGLQAGIFTRDLNVAFKAAEKLEV 407 (453)
T ss_pred CCCCCeeEEECCCHHHHHHHHHhcCc
Confidence 99999999999999999999999875
No 72
>cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like. Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural.
Probab=100.00 E-value=3.6e-62 Score=534.61 Aligned_cols=349 Identities=20% Similarity=0.221 Sum_probs=293.4
Q ss_pred HHHcCCceeeEEecCccccccHHhHHHHHHHHHHHHHH--HhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Q 006484 269 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRR--LQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 346 (643)
Q Consensus 269 ~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~--w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~ 346 (643)
+|.+|+.++++...+ .++++++++.|++||+. |+. ++.+|.++|++++++|++|+++|+++++.|.+++.
T Consensus 3 nP~t~~~i~~~~~~~------~~~v~~av~~A~~a~~~~~w~~-~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~- 74 (455)
T cd07120 3 DPATGEVIGTYADGG------VAEAEAAIAAARRAFDETDWAH-DPRLRARVLLELADAFEANAERLARLLALENGKIL- 74 (455)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHhcCCCccCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH-
Confidence 356788889988887 89999999999999985 998 89999999999999999999999999887765432
Q ss_pred hchhhHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCeeEEEEeeeeeeEEEEcCCC-ch-hHHHHHHH
Q 006484 347 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFESR-PD-ALVQIASL 423 (643)
Q Consensus 347 ~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~~-P~-~~~~~~~~ 423 (643)
.++ ..|+..+++.++++++..+. .|...+. ..+...+..|+|+|||++|+||| |. +.+++++|
T Consensus 75 ---~~a--------~~Ev~~~i~~l~~~~~~~~~~~g~~~~~---~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~ 140 (455)
T cd07120 75 ---GEA--------RFEISGAISELRYYAGLARTEAGRMIEP---EPGSFSLVLREPMGVAGIIVPWNSPVVLLVRSLAP 140 (455)
T ss_pred ---HHH--------HHHHHHHHHHHHHHHHHHHHhcCccccc---CCCceEEEEEecceeEEEECCCchHHHHHHHHHHH
Confidence 122 13566666777766543322 2322211 12345678899999999999995 84 56789999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHHhc
Q 006484 424 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 501 (643)
Q Consensus 424 AlaaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a 501 (643)
||++||+||+|||+.+|.++..++++++++ + +|+|++|+|++ +.++++.|..||++++|+||||+.+|+.|++.+
T Consensus 141 AL~aGN~vvlKps~~~~~~~~~l~~~~~~a---ag~P~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a 217 (455)
T cd07120 141 ALAAGCTVVVKPAGQTAQINAAIIRILAEI---PSLPAGVVNLFTESGSEGAAHLVASPDVDVISFTGSTATGRAIMAAA 217 (455)
T ss_pred HHHcCCEEEeECCCCChHHHHHHHHHHHHh---cCCCccceEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHH
Confidence 999999999999999999999999999873 4 99999999995 556777777899999999999999999998876
Q ss_pred ---CCCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC------
Q 006484 502 ---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------ 571 (643)
Q Consensus 502 ---~~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~------ 571 (643)
.+|+++|||||||+||++|||+|.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++++
T Consensus 218 a~~~~~~~lElGG~~~~IV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~l~~G~p~~~ 296 (455)
T cd07120 218 APTLKRLGLELGGKTPCIVFDDADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIA-DEVRDRLAARLAAVKVGPGLDP 296 (455)
T ss_pred HhcCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEEcHHHH-HHHHHHHHHHHHhcCcCCCCCC
Confidence 38999999999999999999999999999999999998 999999999999999 7999999999886632
Q ss_pred ----------------------------EE-ecCcc-c----ccc-c-c-C-----CCCccccccccCceEEEEEeCCHH
Q 006484 572 ----------------------------GL-FGGPR-A----SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 609 (643)
Q Consensus 572 ----------------------------~~-~g~~~-~----~~~-~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~d 609 (643)
++ +|+.. . .++ + | | ++|.+++||+||||++|++|+|+|
T Consensus 297 ~~~~gpli~~~~~~~~~~~i~~a~~~ga~~~~~g~~~~~~~~~g~~~~Ptvl~~~~~d~~i~~~E~FgPvl~v~~~~~~d 376 (455)
T cd07120 297 ASDMGPLIDRANVDRVDRMVERAIAAGAEVVLRGGPVTEGLAKGAFLRPTLLEVDDPDADIVQEEIFGPVLTLETFDDEA 376 (455)
T ss_pred CCCcCCccCHHHHHHHHHHHHHHHHCCCEEEeCCccCcccCCCCceECCEEEecCCCCChhhhCcCcCceEEEeecCCHH
Confidence 12 23321 1 122 3 5 2 357899999999999999999999
Q ss_pred HHHHHHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 610 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 610 eAi~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
|||+++|+++|||++||||+|.++++++++++++
T Consensus 377 eai~~~n~~~~gLs~~ift~d~~~a~~~~~~l~~ 410 (455)
T cd07120 377 EAVALANDTDYGLAASVWTRDLARAMRVARAIRA 410 (455)
T ss_pred HHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCc
Confidence 9999999999999999999999999999999874
No 73
>cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17. Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences.
Probab=100.00 E-value=8.8e-62 Score=539.28 Aligned_cols=351 Identities=18% Similarity=0.188 Sum_probs=287.8
Q ss_pred HHHHH-cCCceeeEEecCccccccHHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHH
Q 006484 267 IIKVL-EGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEA-NESLIKVENEADVAAA 344 (643)
Q Consensus 267 l~~~~-~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~-~~~~i~~~~~~~~~~~ 344 (643)
+.+|. +|+.++++...+ .+++++++++|++||+.|+++|..+|.++|++++++|++ |+++|++++..|++++
T Consensus 50 v~~P~~tg~~l~~~~~~~------~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~ela~~~~~e~Gk~ 123 (522)
T cd07123 50 QVMPHDHAHVLATYHYAD------AALVEKAIEAALEARKEWARMPFEDRAAIFLKAADLLSGKYRYELNAATMLGQGKN 123 (522)
T ss_pred EECCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhCHHHHHHHHHHhcCCC
Confidence 35677 488889888887 899999999999999999999999999999999999996 8999999887665443
Q ss_pred HHhchhhHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCeeEEEEeeee-eeEEEEcCCC-ch-hHHHH
Q 006484 345 QEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPL-GVLLIVFESR-PD-ALVQI 420 (643)
Q Consensus 345 ~~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~Pl-Gvv~~I~p~~-P~-~~~~~ 420 (643)
. .++. ..++...++.++++++..+. .+..... ...+...++.++|+ |||++|+||| |. +..++
T Consensus 124 ~----~~a~-------~~~v~~~~~~~~~~a~~~~~~~~~~~~~--~~~~~~~~~~~~P~~GVv~~I~PwNfP~~~~~~~ 190 (522)
T cd07123 124 V----WQAE-------IDAACELIDFLRFNVKYAEELYAQQPLS--SPAGVWNRLEYRPLEGFVYAVSPFNFTAIGGNLA 190 (522)
T ss_pred H----HHHh-------HHHHHHHHHHHHHHHHHHHHhcCccccC--CCCCceeEEEEecCCceEEEECCcccHHHHHHHH
Confidence 2 1221 12344455555555433221 1221111 11234567889999 9999999994 84 56789
Q ss_pred HHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHH
Q 006484 421 ASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIK 498 (643)
Q Consensus 421 ~~~AlaaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~ 498 (643)
++||| +||+||+|||++||+++.++++++.+ + ||+|+||+|+| ++++++.|..||+|++|+||||+++|+.|+
T Consensus 191 ~~pal-aGN~VVlKPs~~tp~~~~~l~~~l~~----aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~V~FTGS~~~G~~i~ 265 (522)
T cd07123 191 GAPAL-MGNVVLWKPSDTAVLSNYLVYKILEE----AGLPPGVINFVPGDGPVVGDTVLASPHLAGLHFTGSTPTFKSLW 265 (522)
T ss_pred HHHHH-hCCEEEEECCCCCCHHHHHHHHHHHH----cCcCCCcEEEEecCchHHHHHHhcCCCcCEEEEECCHHHHHHHH
Confidence 99999 69999999999999999999999987 7 99999999995 556788888899999999999999999998
Q ss_pred HhcC---C------CEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHH
Q 006484 499 ESTK---I------PVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQH 568 (643)
Q Consensus 499 ~~a~---~------p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~ 568 (643)
+.++ + |+++|||||||+||++|||+|.|++.+++|+|.|+| +|+|++|+|||+++| |+|+++|++++++
T Consensus 266 ~~aa~~l~~~~~~~~v~lElGGkn~~IV~~dAdl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~ 344 (522)
T cd07123 266 KQIGENLDRYRTYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAFEYQGQKCSAASRAYVPESLW-PEVKERLLEELKE 344 (522)
T ss_pred HHHHhhcccccccCCEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHH-HHHHHHHHHHHhh
Confidence 8763 4 899999999999999999999999999999999998 999999999999999 7999999999886
Q ss_pred cCC-----------------------------------EE-ecCccc--cccc--c-C-----CCCccccccccCceEEE
Q 006484 569 EGV-----------------------------------GL-FGGPRA--SKLL--Q-I-----PETRLFHHEYNSMVCTV 602 (643)
Q Consensus 569 ~~~-----------------------------------~~-~g~~~~--~~~~--p-v-----~~~~~~~eE~FgPvl~v 602 (643)
+.+ ++ .|+... .++| | | ++|++++||+||||++|
T Consensus 345 l~~G~p~d~~t~~Gpli~~~~~~~v~~~v~~a~~~~Ga~vl~gg~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~V 424 (522)
T cd07123 345 IKMGDPDDFSNFMGAVIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCDDSVGYFVEPTVIETTDPKHKLMTEEIFGPVLTV 424 (522)
T ss_pred CccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEeCCCcCCCCCceEcCEEEeCCCCCChhhhcCCCCCeEEE
Confidence 521 12 233221 2333 6 2 35899999999999999
Q ss_pred EEeCC--HHHHHHHHHccC-CCceeEEEecCHHHHHHHHHhcC
Q 006484 603 EIVDD--VRAAIDHIHQHG-SAHTDCIVAEDQKVAETFLCQVD 642 (643)
Q Consensus 603 ~~~~~--~deAi~~aN~~~-~GL~a~v~t~d~~~~~~~~~~l~ 642 (643)
++|+| +||||+++|+++ |||++||||+|.+++.+++++++
T Consensus 425 ~~~~~~~~~eai~~aN~~~~~gL~a~Vft~d~~~~~~~~~~l~ 467 (522)
T cd07123 425 YVYPDSDFEETLELVDTTSPYALTGAIFAQDRKAIREATDALR 467 (522)
T ss_pred EEeCCCCHHHHHHHHhCCCCcCceEEEEeCCHHHHHHHHHhhh
Confidence 99994 799999999985 99999999999999999999863
No 74
>cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like. Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD.
Probab=100.00 E-value=7.1e-62 Score=536.92 Aligned_cols=351 Identities=19% Similarity=0.224 Sum_probs=292.9
Q ss_pred HHHHcCCceeeEEecCccccccHHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Q 006484 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (643)
Q Consensus 268 ~~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~ 347 (643)
.++.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|+++.++|++++..|.+++.
T Consensus 18 ~~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~-- 89 (468)
T cd07088 18 LNPATGEVVATVPAAT------AEDADRAVDAAEAAQKAWERLPAIERAAYLRKLADLIRENADELAKLIVEEQGKTL-- 89 (468)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCH--
Confidence 4456788889888887 88999999999999999999999999999999999999999999998877665432
Q ss_pred chhhHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHHHHH
Q 006484 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 424 (643)
Q Consensus 348 g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~~A 424 (643)
.++ ..++..+++.+++++.+... .+...+. ...+...+.+++|+|||++|+|| +|. +.++++++|
T Consensus 90 --~~a--------~~ev~~~~~~l~~~~~~a~~~~~~~~~~--~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~A 157 (468)
T cd07088 90 --SLA--------RVEVEFTADYIDYMAEWARRIEGEIIPS--DRPNENIFIFKVPIGVVAGILPWNFPFFLIARKLAPA 157 (468)
T ss_pred --HHH--------HHHHHHHHHHHHHHHHHHHHhCCccccC--ccccceeEEEEecceeEEEEccCchHHHHHHHHHHHH
Confidence 122 12455555555555443222 1222211 01234567789999999999998 586 457899999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHHhc-
Q 006484 425 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 501 (643)
Q Consensus 425 laaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a- 501 (643)
|++||+||+|||+.+|.++..+++++++ + ||+|++|+|++ +.++++.|..||++|+|+||||+.+|++|++.+
T Consensus 158 L~aGN~VVlKps~~~p~~~~~l~~~~~~----aglP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa 233 (468)
T cd07088 158 LVTGNTIVIKPSEETPLNALEFAELVDE----AGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAA 233 (468)
T ss_pred HHcCCEEEEECCCcchHHHHHHHHHHHH----cCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHH
Confidence 9999999999999999999999999987 7 99999999995 455777777899999999999999999998876
Q ss_pred --CCCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC-------
Q 006484 502 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 571 (643)
Q Consensus 502 --~~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~------- 571 (643)
.+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|++++|+|||+++| |+|+++|+++++++++
T Consensus 234 ~~~~~~~lelGG~~~~iV~~dadl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~~ 312 (468)
T cd07088 234 ENITKVSLELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIY-DEFMEKLVEKMKAVKVGDPFDAA 312 (468)
T ss_pred hcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHhcccCcCCcCCeEEEEcHHHH-HHHHHHHHHHHHhcCCCCCCCCC
Confidence 38999999999999999999999999999999999998 999999999999999 7999999999887532
Q ss_pred ---------------------------EE-ecCccc---cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHHH
Q 006484 572 ---------------------------GL-FGGPRA---SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAI 612 (643)
Q Consensus 572 ---------------------------~~-~g~~~~---~~-~~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~deAi 612 (643)
++ +|+... .+ ++ | | +++.+++||+||||++|++|+|+||||
T Consensus 313 ~~~gpli~~~~~~~~~~~i~~a~~~ga~vl~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai 392 (468)
T cd07088 313 TDMGPLVNEAALDKVEEMVERAVEAGATLLTGGKRPEGEKGYFYEPTVLTNVRQDMEIVQEEIFGPVLPVVKFSSLDEAI 392 (468)
T ss_pred CccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceeEcCEEEecCCCCCchhhCCCcCCeEEEEecCCHHHHH
Confidence 11 233221 13 33 5 2 357899999999999999999999999
Q ss_pred HHHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 613 DHIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 613 ~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
+++|+++|||++||||+|.+++++|++++++
T Consensus 393 ~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~ 423 (468)
T cd07088 393 ELANDSEYGLTSYIYTENLNTAMRATNELEF 423 (468)
T ss_pred HHHhCCCCCceEEEECCCHHHHHHHHHhCCc
Confidence 9999999999999999999999999999874
No 75
>cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like. Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde.
Probab=100.00 E-value=4.5e-62 Score=539.73 Aligned_cols=350 Identities=19% Similarity=0.211 Sum_probs=293.8
Q ss_pred HHHHcCCceeeEEecCccccccHHhHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Q 006484 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSR--RLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 345 (643)
Q Consensus 268 ~~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~ 345 (643)
.++.+|+.++++...+ .+++++++++|++||+ .|+++|..+|.++|++++++|+++.++|+++++.|++++.
T Consensus 18 ~~P~tg~~i~~~~~~~------~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~ 91 (482)
T cd07119 18 INPANGEVIATVPEGT------AEDAKRAIAAARRAFDSGEWPHLPAQERAALLFRIADKIREDAEELARLETLNTGKTL 91 (482)
T ss_pred eCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH
Confidence 3456788888887777 8899999999999997 5999999999999999999999999999999887765432
Q ss_pred HhchhhHHHHHhhcChhHHHHHHHHHHHHhcccc-cccccccccccCCCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHHH
Q 006484 346 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 422 (643)
Q Consensus 346 ~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~ 422 (643)
.++. .++..+++.++++++..+ +.+...+. +.+...+++++|+|||++|+|| ||. +.+++++
T Consensus 92 ----~~a~--------~ev~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~ 156 (482)
T cd07119 92 ----RESE--------IDIDDVANCFRYYAGLATKETGEVYDV---PPHVISRTVREPVGVCGLITPWNYPLLQAAWKLA 156 (482)
T ss_pred ----HHHH--------HHHHHHHHHHHHHHHHHHHhcCccccC---CCCceEEEEEeeeeeEEEEcCCchHHHHHHHHHH
Confidence 2222 245556666666554332 22332221 1344567899999999999998 585 5678999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHHh
Q 006484 423 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 500 (643)
Q Consensus 423 ~AlaaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~ 500 (643)
+||++||+||+|||+.+|.|+.++++++.+ + +|+|++|+|++ +.+.++.|..||++|+|+||||+.+|++|++.
T Consensus 157 ~ALaaGN~VilKps~~~p~~~~~l~~~~~~----aGlP~gv~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~ 232 (482)
T cd07119 157 PALAAGNTVVIKPSEVTPLTTIALFELIEE----AGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMRA 232 (482)
T ss_pred HHHhcCCEEEEECCccccHHHHHHHHHHHH----cCCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence 999999999999999999999999999987 7 99999999995 44577778889999999999999999999987
Q ss_pred c---CCCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC-----
Q 006484 501 T---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV----- 571 (643)
Q Consensus 501 a---~~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~----- 571 (643)
+ .+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|++++|+|||+++| |+|+++|+++++++.+
T Consensus 233 aa~~~~~~~lElGGkn~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~-d~f~~~l~~~~~~~~~G~~~~ 311 (482)
T cd07119 233 AAGNVKKVALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESIH-DKFVAALAERAKKIKLGNGLD 311 (482)
T ss_pred HHhcCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHH-HHHHHHHHHHHHhcCCCCCCC
Confidence 6 38999999999999999999999999999999999988 999999999999999 7999999998877532
Q ss_pred -----------------------------EE-ecCccc------ccc-c-c-C-----CCCccccccccCceEEEEEeCC
Q 006484 572 -----------------------------GL-FGGPRA------SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDD 607 (643)
Q Consensus 572 -----------------------------~~-~g~~~~------~~~-~-p-v-----~~~~~~~eE~FgPvl~v~~~~~ 607 (643)
++ +|+... .++ + | | +++.+++||+||||++|++|+|
T Consensus 312 ~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~ 391 (482)
T cd07119 312 ADTEMGPLVSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDELAKGYFVEPTIFDDVDRTMRIVQEEIFGPVLTVERFDT 391 (482)
T ss_pred CCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceECCEEEecCCCCChHhhCCCCCceEEEeccCC
Confidence 12 233321 122 3 5 2 3578999999999999999999
Q ss_pred HHHHHHHHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 608 VRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 608 ~deAi~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
+||||+++|+++|||++||||+|.+++.+|++++++
T Consensus 392 ~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~ 427 (482)
T cd07119 392 EEEAIRLANDTPYGLAGAVWTKDIARANRVARRLRA 427 (482)
T ss_pred HHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCc
Confidence 999999999999999999999999999999999874
No 76
>cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like. Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD.
Probab=100.00 E-value=5.4e-62 Score=529.75 Aligned_cols=332 Identities=20% Similarity=0.204 Sum_probs=270.7
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhhHHHHHhhcChhHHHHHHHHHHHH
Q 006484 295 EMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRIL 374 (643)
Q Consensus 295 ~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~~ 374 (643)
+.+++|++||+.|+++|..+|.++|++++++|++|.++|+++++.|++++. .++.. .++..+++.++++
T Consensus 2 ~~v~~a~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~----~~a~~-------~ev~~~~~~~~~~ 70 (449)
T cd07136 2 SLVEKQRAFFKTGATKDVEFRIEQLKKLKQAIKKYENEILEALKKDLGKSE----FEAYM-------TEIGFVLSEINYA 70 (449)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH----HHHHH-------HHHHHHHHHHHHH
Confidence 578899999999999999999999999999999999999999887765432 23221 2344444444444
Q ss_pred hccccc-ccc-cccccccCCCeeEEEEeeeeeeEEEEcCCC-ch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHH
Q 006484 375 ADMEEP-IGQ-ILKRTELADGLILEKTSCPLGVLLIVFESR-PD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVI 450 (643)
Q Consensus 375 ~~~~~~-~g~-~~~~~~~~~~~~~~~~~~PlGvv~~I~p~~-P~-~~~~~~~~AlaaGN~vi~Kps~~tp~t~~~~~~l~ 450 (643)
++..+. .+. ..+......+...+..++|+|||++|+||| |. +.+++++|||++||+||+|||+.||.++..+++++
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vi~Kps~~tp~~~~~l~~~~ 150 (449)
T cd07136 71 IKHLKKWMKPKRVKTPLLNFPSKSYIYYEPYGVVLIIAPWNYPFQLALAPLIGAIAAGNTAVLKPSELTPNTSKVIAKII 150 (449)
T ss_pred HHHHHHHhCCCccCCccccCCceeEEEEecCeEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECcccchHHHHHHHHHH
Confidence 432211 111 111100012335678899999999999984 85 56799999999999999999999999999999999
Q ss_pred HHhcccccCcCceEeecCcchHhHhhhCCCCccEEEeecCHHHHHHHHHhc---CCCEEEecCccceEEEcCCCCHHHHH
Q 006484 451 TSAIPDTVGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---KIPVLGHADGICHVYVDKSANLDVAK 527 (643)
Q Consensus 451 ~~a~~~alP~g~v~~v~~~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a---~~p~~lelGG~~p~iV~~dAdl~~A~ 527 (643)
.+ ++|+|++|+|+++.+.+..|.+|+ ||+|+||||+++|+.|++.+ .+|+++|||||||+||++|||+|.|+
T Consensus 151 ~~----alP~gv~~~v~g~~~~~~~L~~~~-v~~V~fTGS~~~g~~i~~~aa~~~~~v~lElgGknp~iV~~dADld~aa 225 (449)
T cd07136 151 EE----TFDEEYVAVVEGGVEENQELLDQK-FDYIFFTGSVRVGKIVMEAAAKHLTPVTLELGGKSPCIVDEDANLKLAA 225 (449)
T ss_pred HH----hCCCCEEEEEeCChHHHHHHhcCC-CCEEEEECCHHHHHHHHHHHHhcCCCEEEEecCCCeEEECCCCCHHHHH
Confidence 87 499999999996434455555666 99999999999999999877 38999999999999999999999999
Q ss_pred HHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCCE-----------------------------EecCc
Q 006484 528 NIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVG-----------------------------LFGGP 577 (643)
Q Consensus 528 ~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~~-----------------------------~~g~~ 577 (643)
+.+++++|.|+| .|+|++|+|||+++| |+|+++|++.++++... ++|+.
T Consensus 226 ~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~L~~~~~~~~~g~p~~~~~~gpli~~~~~~~i~~~i~~a~~~~gG~ 304 (449)
T cd07136 226 KRIVWGKFLNAGQTCVAPDYVLVHESVK-EKFIKELKEEIKKFYGEDPLESPDYGRIINEKHFDRLAGLLDNGKIVFGGN 304 (449)
T ss_pred HHHHHHHHcccCCcccCCCEEEEcHHHH-HHHHHHHHHHHHHhcCCCCCCCCCccCcCCHHHHHHHHHHHhcceEEECCC
Confidence 999999999998 999999999999999 79999999999886321 12332
Q ss_pred cc-cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 578 RA-SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 578 ~~-~~-~~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
.. .+ ++ | | ++|.+++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++
T Consensus 305 ~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~ 379 (449)
T cd07136 305 TDRETLYIEPTILDNVTWDDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALYLFSEDKKVEKKVLENLSF 379 (449)
T ss_pred cCCCCCEEeeEEEecCCCcChHHhccccCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCc
Confidence 21 13 33 5 2 3589999999999999999999999999999999999999999999999999999874
No 77
>cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins. ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co
Probab=100.00 E-value=4.7e-62 Score=538.78 Aligned_cols=351 Identities=16% Similarity=0.177 Sum_probs=294.4
Q ss_pred HHHHcCCceeeEEecCccccccHHhHHHHHHHHHHHHHHH--hcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Q 006484 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRL--QALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 345 (643)
Q Consensus 268 ~~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w--~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~ 345 (643)
.+|.+|+.++++...+ .+++++++++|++||+.| +++|.++|.++|++++++|+++.++|++++..|++++.
T Consensus 24 ~~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~ 97 (476)
T cd07091 24 INPATEEVICQVAEAD------EEDVDAAVKAARAAFETGWWRKMDPRERGRLLNKLADLIERDRDELAALESLDNGKPL 97 (476)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH
Confidence 3466788889887777 889999999999999985 49999999999999999999999999999887765432
Q ss_pred HhchhhHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHHH
Q 006484 346 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 422 (643)
Q Consensus 346 ~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~ 422 (643)
.+.. ..++..+++.+++++++.+. .++..+. ..+...+..++|+|||++|+|| ||. +++++++
T Consensus 98 ----~~~~-------~~ev~~~~~~~~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~ 163 (476)
T cd07091 98 ----EESA-------KGDVALSIKCLRYYAGWADKIQGKTIPI---DGNFLAYTRREPIGVCGQIIPWNFPLLMLAWKLA 163 (476)
T ss_pred ----HHHH-------HHHHHHHHHHHHHHHHHHHHhcCccccC---CCCceEEEEEeceeEEEEECCCcCHHHHHHHHHH
Confidence 1111 13566677777776654332 2332221 1344567889999999999998 585 5678999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHHh
Q 006484 423 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 500 (643)
Q Consensus 423 ~AlaaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~ 500 (643)
|||++||+||+|||+.+|.|+..+++++.+ + ||+|++|+|++ +.++++.|..||++|+|+||||+.+|+.|++.
T Consensus 164 ~AL~aGN~VvlKps~~~p~~~~~l~~~~~~----aglP~g~~~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~g~~v~~~ 239 (476)
T cd07091 164 PALAAGNTVVLKPAEQTPLSALYLAELIKE----AGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGRTIMEA 239 (476)
T ss_pred HHHHcCCEEEEeCCCCChHHHHHHHHHHHH----cCcCCCcEEEEeCCChhHHHHHhcCCCcCEEEEECcHHHHHHHHHH
Confidence 999999999999999999999999999987 7 99999999995 55677778889999999999999999999886
Q ss_pred cC----CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC----
Q 006484 501 TK----IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV---- 571 (643)
Q Consensus 501 a~----~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~---- 571 (643)
+. +|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 240 aa~~~~~~~~lElgG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~-~~f~~~L~~~~~~~~~g~p~ 318 (476)
T cd07091 240 AAKSNLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESIY-DEFVEKFKARAEKRVVGDPF 318 (476)
T ss_pred HHhcCCceEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHHHH-HHHHHHHHHHHhhCCCCCCC
Confidence 62 7999999999999999999999999999999999988 999999999999999 7999999999887532
Q ss_pred ------------------------------EE-ecCccc--cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHH
Q 006484 572 ------------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 610 (643)
Q Consensus 572 ------------------------------~~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~de 610 (643)
++ +|+... .+ ++ | | +++++++||+||||++|++|+|+||
T Consensus 319 ~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~vl~gg~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~e 398 (476)
T cd07091 319 DPDTFQGPQVSKAQFDKILSYIESGKKEGATLLTGGERHGSKGYFIQPTVFTDVKDDMKIAKEEIFGPVVTILKFKTEDE 398 (476)
T ss_pred CCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceECcEEecCCCCCChhhhCCCCCCeEEEeecCCHHH
Confidence 11 233221 12 23 5 2 3578999999999999999999999
Q ss_pred HHHHHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 611 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 611 Ai~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
||+++|+++|||++||||+|.++++++++++++
T Consensus 399 ai~~~n~~~~gLsa~v~t~d~~~~~~~~~~l~~ 431 (476)
T cd07091 399 VIERANDTEYGLAAGVFTKDINKALRVSRALKA 431 (476)
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhcCc
Confidence 999999999999999999999999999999874
No 78
>TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme.
Probab=100.00 E-value=8.7e-62 Score=534.47 Aligned_cols=349 Identities=20% Similarity=0.212 Sum_probs=289.0
Q ss_pred HHHcCCceeeEEecCccccccHHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhc
Q 006484 269 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 348 (643)
Q Consensus 269 ~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~g 348 (643)
+|.+++.++++...+ .+++++++++|++|| ++++..+|.++|++++++|+++.++|+++++.|++++.
T Consensus 23 ~P~t~~~i~~~~~~~------~~~v~~av~~A~~a~---~~~~~~~R~~~l~~~a~~l~~~~~ela~~~~~e~Gk~~--- 90 (472)
T TIGR03250 23 YPYNGTVVGTVPKAS------VDDVRRAFAIAAAYR---PTLTRYERSAILDRAAALLAARKEEISDLITLESGLSK--- 90 (472)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHH---hhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCH---
Confidence 456788889988777 889999999998876 47899999999999999999999999999887765432
Q ss_pred hhhHHHHHhhcChhHHHHHHHHHHHHhcccc-ccccccccc--ccCCCeeEEEEeeee-eeEEEEcCCC-ch-hHHHHHH
Q 006484 349 YAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRT--ELADGLILEKTSCPL-GVLLIVFESR-PD-ALVQIAS 422 (643)
Q Consensus 349 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~g~~~~~~--~~~~~~~~~~~~~Pl-Gvv~~I~p~~-P~-~~~~~~~ 422 (643)
.++ ..++..+++.+++++.... ..+...... ....+...+++|+|+ |||++|+||| |. +++++++
T Consensus 91 -~~a--------~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~Gvv~~I~P~N~P~~~~~~~~~ 161 (472)
T TIGR03250 91 -KDS--------LYEVGRVADVLTFAAAEALRDDGQIFSCDLTPHGKARKVFTQREPLLGVISAITPFNHPMNQVAHKIA 161 (472)
T ss_pred -HHH--------HHHHHHHHHHHHHHHHHHHHhcCcccccccCCCCCCceEEEEEcCCCCEEEEEcCCcHHHHHHHHHHH
Confidence 122 2355666666666654332 122221100 011234567889998 9999999994 85 5678999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHHh
Q 006484 423 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 500 (643)
Q Consensus 423 ~AlaaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~ 500 (643)
|||++||+||+|||+.+|.++.++++++.+ + ||+|++|+|++ +.+.+..|..||++++|+||||+.+|+.|++.
T Consensus 162 ~ALaaGN~VvlKps~~~p~~~~~l~~~~~~----aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~ 237 (472)
T TIGR03250 162 PAIATNNRMVVKPSEKTPLSALYLADILYE----AGLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYIAAR 237 (472)
T ss_pred HHHHcCCEEEEECCCcchHHHHHHHHHHHH----cCCCcccEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence 999999999999999999999999999987 7 99999999995 45667777789999999999999999999987
Q ss_pred cC-CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCCE------
Q 006484 501 TK-IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVG------ 572 (643)
Q Consensus 501 a~-~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~~------ 572 (643)
+. +|+++|||||||+||++|||+|.|++.+++++|.|+| .|+|++|+|||+++| |+|+++|+++++++++.
T Consensus 238 a~~~~~~lElGGk~p~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~G~p~~~~ 316 (472)
T TIGR03250 238 AGYRRQVLELGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVA-DRFTELLVEKTRAWRYGDPMDPS 316 (472)
T ss_pred hcCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhhCCCCCCCcEEEEeHhHH-HHHHHHHHHHHHhcCCCCCCCCC
Confidence 74 8999999999999999999999999999999999988 999999999999999 79999999998876321
Q ss_pred ----------------------------E-ecCccccccc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHH
Q 006484 573 ----------------------------L-FGGPRASKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIH 616 (643)
Q Consensus 573 ----------------------------~-~g~~~~~~~~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~deAi~~aN 616 (643)
+ +|+.....++ | | ++|++++||+||||++|++|+|+||||+++|
T Consensus 317 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~aN 396 (472)
T TIGR03250 317 VDMGTVIDEAAAILFEARVNEAIAQGARLLLGNVRDGALYAPTVLDRVDPSMTLVREETFGPVSPVIRFCDIDDAIRISN 396 (472)
T ss_pred CcCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcCCEEEcCEEEeCCCCCChHHhCCCcCCeEEEEEeCCHHHHHHHHh
Confidence 1 1221111123 5 2 3589999999999999999999999999999
Q ss_pred ccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 617 QHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 617 ~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
+++|||++||||+|.+++.++++++++
T Consensus 397 ~~~~gL~a~v~t~d~~~~~~~~~~l~~ 423 (472)
T TIGR03250 397 STAYGLSSGVCTNRLDYITRFIAELQV 423 (472)
T ss_pred CCCccceEEEEcCCHHHHHHHHHHCCc
Confidence 999999999999999999999999874
No 79
>PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed
Probab=100.00 E-value=1.1e-61 Score=539.41 Aligned_cols=349 Identities=17% Similarity=0.184 Sum_probs=287.8
Q ss_pred HHcCCceeeEEecCccccccHHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhch
Q 006484 270 VLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGY 349 (643)
Q Consensus 270 ~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~g~ 349 (643)
|.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|++|.++|+++++.|++++..
T Consensus 39 P~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~e~Gk~~~--- 109 (524)
T PRK09407 39 PFTGEPLATVPVST------AADVEAAFARARAAQRAWAATPVRERAAVLLRFHDLVLENREELLDLVQLETGKARR--- 109 (524)
T ss_pred CCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH---
Confidence 45788889988888 889999999999999999999999999999999999999999999999888765432
Q ss_pred hhHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHHHHHHH
Q 006484 350 AKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIR 426 (643)
Q Consensus 350 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~~Ala 426 (643)
++. .++...+..+++++...+. .+..............+..|+|+|||++|+|| +|. +++++++|||+
T Consensus 110 -~a~--------~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~Pl~~~~~~~~~ALa 180 (524)
T PRK09407 110 -HAF--------EEVLDVALTARYYARRAPKLLAPRRRAGALPVLTKTTELRQPKGVVGVISPWNYPLTLAVSDAIPALL 180 (524)
T ss_pred -HHH--------HHHHHHHHHHHHHHHHHHHhhCCccccccCCCCceEEEEEecceEEEEEeCCCChHHHHHHHHHHHHH
Confidence 221 2344444444444322111 11111000001123467789999999999998 584 57799999999
Q ss_pred hCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHHhcC--
Q 006484 427 SGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK-- 502 (643)
Q Consensus 427 aGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a~-- 502 (643)
+||+||+|||+.+|.++.++++++.+ + +|+|++|+|++ +.+.++.|..| +|+|+||||+.+|++|++.++
T Consensus 181 aGN~VIlKPs~~tp~~~~~l~~ll~e----aGlP~gvv~~v~g~~~~~~~~L~~~--~d~V~fTGs~~~g~~v~~~aa~~ 254 (524)
T PRK09407 181 AGNAVVLKPDSQTPLTALAAVELLYE----AGLPRDLWQVVTGPGPVVGTALVDN--ADYLMFTGSTATGRVLAEQAGRR 254 (524)
T ss_pred cCCEEEEECCCCCHHHHHHHHHHHHH----cCCCcccEEEEecCCchHHHHHHhc--CCEEEEECCHHHHHHHHHHHHhc
Confidence 99999999999999999999999987 7 99999999995 55567766655 899999999999999998774
Q ss_pred -CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC---------
Q 006484 503 -IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV--------- 571 (643)
Q Consensus 503 -~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~--------- 571 (643)
+|+++|||||||+||++|||++.|++.+++|+|.|+| .|+|++|+|||+++| |+|+++|+++++++++
T Consensus 255 ~~~v~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~sGQ~C~a~~rv~V~~~v~-d~f~~~L~~~~~~l~~G~~~~~~~~ 333 (524)
T PRK09407 255 LIGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHESIY-DEFVRAFVAAVRAMRLGAGYDYSAD 333 (524)
T ss_pred CCcEEEECCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHH-HHHHHHHHHHHHhcCCCCCCCcCCc
Confidence 8999999999999999999999999999999999987 999999999999999 7999999999887632
Q ss_pred -------------------------EE-ecCccc---cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHH
Q 006484 572 -------------------------GL-FGGPRA---SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDH 614 (643)
Q Consensus 572 -------------------------~~-~g~~~~---~~-~~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~deAi~~ 614 (643)
++ +|+... .+ ++ | | ++|.+++||+||||++|++|+|+||||++
T Consensus 334 ~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~deai~~ 413 (524)
T PRK09407 334 MGSLISEAQLETVSAHVDDAVAKGATVLAGGKARPDLGPLFYEPTVLTGVTPDMELAREETFGPVVSVYPVADVDEAVER 413 (524)
T ss_pred cCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCceEeCEEEeCCCCCChHHhCCCCCCeEEEEeeCCHHHHHHH
Confidence 12 243221 12 33 5 2 35799999999999999999999999999
Q ss_pred HHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 615 IHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 615 aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
+|+++|||++||||+|.+++.+|++++++
T Consensus 414 ~N~~~~gLsa~V~t~d~~~a~~~~~~l~~ 442 (524)
T PRK09407 414 ANDTPYGLNASVWTGDTARGRAIAARIRA 442 (524)
T ss_pred HhCCCCCceEEEECCCHHHHHHHHHhCCc
Confidence 99999999999999999999999999875
No 80
>cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like. Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD.
Probab=100.00 E-value=1.3e-61 Score=535.94 Aligned_cols=350 Identities=18% Similarity=0.210 Sum_probs=290.1
Q ss_pred HHHc-CCceeeEEecCccccccHHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Q 006484 269 KVLE-GKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (643)
Q Consensus 269 ~~~~-g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~ 347 (643)
+|.+ ++.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|++|.++|++++.+|++++.
T Consensus 20 ~P~t~~~~~~~~~~~~------~~~v~~av~~a~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~ela~~~~~e~Gk~~-- 91 (478)
T cd07131 20 NPADLEEVVGTFPLST------ASDVDAAVEAAREAFPEWRKVPAPRRAEYLFRAAELLKKRKEELARLVTREMGKPL-- 91 (478)
T ss_pred CCCCCCeEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH--
Confidence 4555 45678877776 78999999999999999999999999999999999999999999998876654432
Q ss_pred chhhHHHHHhhcChhHHHHHHHHHHHHhcccc-cccccccccccCCCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHHHHH
Q 006484 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 424 (643)
Q Consensus 348 g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~~A 424 (643)
.++ ..++...++.++++++..+ ..+...+.. ..+...+.+++|+|||++|+|| +|. +..+++++|
T Consensus 92 --~~~--------~~ev~~~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~A 159 (478)
T cd07131 92 --AEG--------RGDVQEAIDMAQYAAGEGRRLFGETVPSE--LPNKDAMTRRQPIGVVALITPWNFPVAIPSWKIFPA 159 (478)
T ss_pred --HHH--------HHHHHHHHHHHHHHHHHHHHhCCcccccC--CCCceEEEEeeceeEEEEECCcCcHHHHHHHHHHHH
Confidence 121 1245555555555543322 122222111 1233467889999999999998 585 566899999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHHhc-
Q 006484 425 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 501 (643)
Q Consensus 425 laaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a- 501 (643)
|++||+||+|||+.+|.++..+++++.+ + ||+|++|+|++ +.++++.|..||+||+|+||||+.+|+.|++.+
T Consensus 160 LaaGN~VvlKps~~~p~~~~~l~~~l~~----aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa 235 (478)
T cd07131 160 LVCGNTVVFKPAEDTPACALKLVELFAE----AGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGETCA 235 (478)
T ss_pred HHcCCEEEEECCCcCcHHHHHHHHHHHh----cCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh
Confidence 9999999999999999999999999987 7 99999999995 455778788899999999999999999998876
Q ss_pred --CCCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC-------
Q 006484 502 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 571 (643)
Q Consensus 502 --~~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~------- 571 (643)
.+|+++|||||||+||++|||+|.|++.+++++|.|+| .|+|++|+|||+++| |+|+++|+++++++++
T Consensus 236 ~~~~~~~lelgG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~~~~g~p~~~~ 314 (478)
T cd07131 236 RPNKRVALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVY-DEFLKRFVERAKRLRVGDGLDEE 314 (478)
T ss_pred hcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhhH-HHHHHHHHHHHHhcCCCCCCCCC
Confidence 48999999999999999999999999999999999998 999999999999999 7999999999887632
Q ss_pred ---------------------------EE-ecCccc------ccc-c-c-C-----CCCccccccccCceEEEEEeCCHH
Q 006484 572 ---------------------------GL-FGGPRA------SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 609 (643)
Q Consensus 572 ---------------------------~~-~g~~~~------~~~-~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~d 609 (643)
++ .|+... .++ + | | +++++++||+||||++|++|+|+|
T Consensus 315 ~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~~ 394 (478)
T cd07131 315 TDMGPLINEAQLEKVLNYNEIGKEEGATLLLGGERLTGGGYEKGYFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVSSLE 394 (478)
T ss_pred CcCCcCCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEeCCCCCChHhhCCCcCCeEEEEEeCCHH
Confidence 11 233211 122 3 5 2 357899999999999999999999
Q ss_pred HHHHHHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 610 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 610 eAi~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
|||+++|+++|||++||||+|.+++++|++++++
T Consensus 395 eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~ 428 (478)
T cd07131 395 EAIEIANDTEYGLSSAIYTEDVNKAFRARRDLEA 428 (478)
T ss_pred HHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcCc
Confidence 9999999999999999999999999999999874
No 81
>TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1. This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate.
Probab=100.00 E-value=8.2e-62 Score=539.03 Aligned_cols=350 Identities=19% Similarity=0.201 Sum_probs=288.8
Q ss_pred HHHHc-CCceeeEEecCccccccHHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHH
Q 006484 268 IKVLE-GKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALE-ANESLIKVENEADVAAAQ 345 (643)
Q Consensus 268 ~~~~~-g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~-~~~~~i~~~~~~~~~~~~ 345 (643)
.++.+ |+.++++...+ .+++++++++|++||+.|+++|..+|.++|++++++|+ +++++|+++++.|++++.
T Consensus 51 ~nP~t~g~~i~~~~~~~------~~~v~~av~~A~~a~~~W~~~~~~~R~~~L~k~a~~l~~~~~~~la~~~~~e~GK~~ 124 (533)
T TIGR01236 51 VQPHNHQAVLAKATNAT------EEDAAKAVEAALDAKKDWSALPFYDRAAIFLKAADLLSGPYREEILAATMLGQSKNV 124 (533)
T ss_pred ECCCCCCeEEEEEeCCC------HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhhcHHHHHHHHHHHcCCcH
Confidence 56675 67788888887 89999999999999999999999999999999999999 599999998887765432
Q ss_pred HhchhhHHHHHhhcChhHHHHHHHHHHHHhcccccc-cccccccccCCCeeEEEEeeee-eeEEEEcCCC-ch-hHHHHH
Q 006484 346 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPL-GVLLIVFESR-PD-ALVQIA 421 (643)
Q Consensus 346 ~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~Pl-Gvv~~I~p~~-P~-~~~~~~ 421 (643)
.++. .+++..+++.+++++.+.+.. +..... ...+...++.++|+ |||++|+||| |. +..+++
T Consensus 125 ----~~a~-------~e~v~~~i~~~~~~a~~a~~~~~~~~~~--~~~~~~~~~~~~P~~GVv~~I~PwN~P~~~~~~~~ 191 (533)
T TIGR01236 125 ----YQAE-------IDAVAELIDFFRFNVKYARELYEQQPSE--SAPGEWNRTDYRPLEGFVYAISPFNFTAIAGNLPG 191 (533)
T ss_pred ----HHHh-------HhHHHHHHHHHHHHHHHHHHhcCccccC--CCCCceeEEEEecCCCEEEEEeCCchHHHHHHHHH
Confidence 1221 113555566666665433222 221100 11234467889999 9999999995 74 456899
Q ss_pred HHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHH
Q 006484 422 SLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKE 499 (643)
Q Consensus 422 ~~AlaaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~ 499 (643)
++|| +||+||+|||++||.++.++++++.+ + ||+|++|+|+| +.++++.|..||+|++|+||||+.+|+.|++
T Consensus 192 a~AL-aGN~VVlKPs~~tp~~~~~l~~~~~~----aGlP~gvv~vv~g~~~~~g~~Lv~~p~v~~V~FTGS~~~G~~i~~ 266 (533)
T TIGR01236 192 APAL-MGNTVIWKPSITATLSNYLTMRILEE----AGLPPGVINFVPGDGFAVSDVVLADPRLAGIHFTGSTATFKHLWK 266 (533)
T ss_pred HHHH-hCCeEEEECCCcCCHHHHHHHHHHHh----cCCCCCcEEEEecCcHHHHHHHhcCCCcCEEEEECCHHHHHHHHH
Confidence 9999 89999999999999999999999987 7 99999999995 4567777778999999999999999999988
Q ss_pred hcC---C------CEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHc
Q 006484 500 STK---I------PVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHE 569 (643)
Q Consensus 500 ~a~---~------p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~ 569 (643)
.++ + ++++|||||||+||++|||+|.|++.+++|+|.|+| +|+|++|+|||+++| |+|+++|+++++++
T Consensus 267 ~aa~~l~~~~~~~~v~lElGGknp~IV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l 345 (533)
T TIGR01236 267 WVASNLDRYHNFPRIVGETGGKDFHVVHPSADIDHAVTATIRGAFEYQGQKCSAASRLYVPHSVW-PRFKDELLAELAEV 345 (533)
T ss_pred HHHhhccccccCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCCCcCCeeEEEchhHH-HHHHHHHHHHHhcC
Confidence 763 3 499999999999999999999999999999999998 999999999999999 79999999998875
Q ss_pred CC------------------------------------EE-ecCccc--cccc--c-C-----CCCccccccccCceEEE
Q 006484 570 GV------------------------------------GL-FGGPRA--SKLL--Q-I-----PETRLFHHEYNSMVCTV 602 (643)
Q Consensus 570 ~~------------------------------------~~-~g~~~~--~~~~--p-v-----~~~~~~~eE~FgPvl~v 602 (643)
.+ ++ +|+... .++| | | ++|.+++||+||||++|
T Consensus 346 ~~G~p~d~~t~~Gpli~~~~~~~v~~~i~~a~~~Ga~a~vl~GG~~~~~~G~~~~PTvl~~~~~d~~i~~eE~FGPVl~v 425 (533)
T TIGR01236 346 KVGDPDDFSNFMGAVIDERSFVKNVKYIERAKGDPAELTILYGGKYDDSEGYFVEPTVILSKDPTDPLMVEEIFGPVLTV 425 (533)
T ss_pred CcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhcCCceEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcccCCCCeEEE
Confidence 32 11 233221 1333 5 2 35899999999999999
Q ss_pred EEeCC--HHHHHHHH-HccCCCceeEEEecCHHHHHHHHHhcC
Q 006484 603 EIVDD--VRAAIDHI-HQHGSAHTDCIVAEDQKVAETFLCQVD 642 (643)
Q Consensus 603 ~~~~~--~deAi~~a-N~~~~GL~a~v~t~d~~~~~~~~~~l~ 642 (643)
++|+| +||||+++ |+++|||++||||+|.+++.+++++++
T Consensus 426 ~~~~~~~~~eai~~~~n~~~~gL~a~Vft~d~~~a~~~~~~l~ 468 (533)
T TIGR01236 426 YVYPDDKYKEILDVVDSTSRYGLTGAVFAKDRQAILEADKRLR 468 (533)
T ss_pred EEeCCCCHHHHHHHHhcCCCcCceEEEEeCCHHHHHHHHHHhh
Confidence 99998 59999999 899999999999999999999999865
No 82
>cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like. N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate.
Probab=100.00 E-value=1e-61 Score=528.06 Aligned_cols=332 Identities=17% Similarity=0.170 Sum_probs=276.2
Q ss_pred hHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhhHHHHHhhcChhHHHHHHHHH
Q 006484 292 GAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSI 371 (643)
Q Consensus 292 ~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~ 371 (643)
++++++++|++||+.|+++|.++|.++|++++++|++|.++|+++++.|++++. .++. .++..++..+
T Consensus 1 ~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~----~ea~--------~ev~~~~~~~ 68 (431)
T cd07095 1 QVDAAVAAARAAFPGWAALSLEERAAILRRFAELLKANKEELARLISRETGKPL----WEAQ--------TEVAAMAGKI 68 (431)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCH----HHHH--------HHHHHHHHHH
Confidence 478999999999999999999999999999999999999999999887765442 2221 2444444444
Q ss_pred HHHhcccc-cccccccccccCCCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHH
Q 006484 372 RILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHK 448 (643)
Q Consensus 372 ~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~~AlaaGN~vi~Kps~~tp~t~~~~~~ 448 (643)
++++.... ..+..... ..+...+++++|+|||++|+|| ||. ++++++++||++||+||+|||+.+|.++..+.+
T Consensus 69 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VI~Kps~~~~~~~~~l~~ 145 (431)
T cd07095 69 DISIKAYHERTGERATP---MAQGRAVLRHRPHGVMAVFGPFNFPGHLPNGHIVPALLAGNTVVFKPSELTPAVAELMVE 145 (431)
T ss_pred HHHHHHHHHhcCCcccC---CCCceEEEEEecceEEEEECCCchHHHHHHHHHHHHHhcCCEEEeeCCCCCcHHHHHHHH
Confidence 44432211 11211111 1234567889999999999999 485 567899999999999999999999999999999
Q ss_pred HHHHhcccc-cCcCceEeecCcchHhHhhhCCCCccEEEeecCHHHHHHHHHhc----CCCEEEecCccceEEEcCCCCH
Q 006484 449 VITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST----KIPVLGHADGICHVYVDKSANL 523 (643)
Q Consensus 449 l~~~a~~~a-lP~g~v~~v~~~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a----~~p~~lelGG~~p~iV~~dAdl 523 (643)
++.+ + +|+|++|+|+++.+.++.|..||++|+|+||||+++|+.|++.+ .+|+++|||||||+||++|||+
T Consensus 146 ~~~~----ag~P~g~~~~v~g~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~lElgG~~~~iV~~daDl 221 (431)
T cd07095 146 LWEE----AGLPPGVLNLVQGGRETGEALAAHEGIDGLLFTGSAATGLLLHRQFAGRPGKILALEMGGNNPLVVWDVADI 221 (431)
T ss_pred HHHH----hCcChhHheEEeCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhhccCCCcEEEECCCCCeEEECCCCCH
Confidence 9987 6 99999999996555677788899999999999999999998864 3789999999999999999999
Q ss_pred HHHHHHHHhhcCCCCC-ccccceeEEEcCc-cCCchhHHHHHHHHHHcCCE-----------------------------
Q 006484 524 DVAKNIVIDAKIDYPA-ACNAMETLLVHKD-LACNGALNELVVELQHEGVG----------------------------- 572 (643)
Q Consensus 524 ~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~-i~~~~f~~~l~~~~~~~~~~----------------------------- 572 (643)
|.|++.+++|+|.|+| .|++++|+|||++ +| |+|+++|+++++++++.
T Consensus 222 ~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~i~-d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~v~~a~ 300 (431)
T cd07095 222 DAAAYLIVQSAFLTAGQRCTCARRLIVPDGAVG-DAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAAAAARYLLAQQDLL 300 (431)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCeEEEEcCcchH-HHHHHHHHHHHHhCCCCCCCCCCCCcccccCHHHHHHHHHHHHHHH
Confidence 9999999999999998 9999999999999 99 79999999999876421
Q ss_pred -----E-ecCccc--cc-cc-c-C----CCCccccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEecCHHHHHHH
Q 006484 573 -----L-FGGPRA--SK-LL-Q-I----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETF 637 (643)
Q Consensus 573 -----~-~g~~~~--~~-~~-p-v----~~~~~~~eE~FgPvl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~~~~~ 637 (643)
+ .|+... .+ ++ | | ++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++
T Consensus 301 ~~ga~~l~gg~~~~~~g~~~~Ptv~~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~a~~~ 380 (431)
T cd07095 301 ALGGEPLLAMERLVAGTAFLSPGIIDVTDAADVPDEEIFGPLLQVYRYDDFDEAIALANATRFGLSAGLLSDDEALFERF 380 (431)
T ss_pred hcCCEEEeCCCcCCCCCeEEcCEEEecCCCChHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHH
Confidence 1 122111 12 23 5 2 3479999999999999999999999999999999999999999999999999
Q ss_pred HHhcCC
Q 006484 638 LCQVDR 643 (643)
Q Consensus 638 ~~~l~~ 643 (643)
++++++
T Consensus 381 ~~~l~~ 386 (431)
T cd07095 381 LARIRA 386 (431)
T ss_pred HHhCCc
Confidence 999874
No 83
>cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like. Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate.
Probab=100.00 E-value=1.4e-61 Score=527.77 Aligned_cols=330 Identities=18% Similarity=0.204 Sum_probs=275.1
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhhHHHHHhhcChhHHHHHHHHHH
Q 006484 293 AREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIR 372 (643)
Q Consensus 293 v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~ 372 (643)
+++++++|++||+.|+++|.++|.++|++++++|+++.++|+++++.|.+++. .++ ..++..+++.++
T Consensus 1 v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~----~~a--------~~ev~~~~~~~~ 68 (429)
T cd07100 1 IEAALDRAHAAFLAWRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPI----AEA--------RAEVEKCAWICR 68 (429)
T ss_pred CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCH----HHH--------HHHHHHHHHHHH
Confidence 46899999999999999999999999999999999999999999887765432 222 124555555555
Q ss_pred HHhcccccc-c-ccccccccCCCeeEEEEeeeeeeEEEEcCCC-ch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHH
Q 006484 373 ILADMEEPI-G-QILKRTELADGLILEKTSCPLGVLLIVFESR-PD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHK 448 (643)
Q Consensus 373 ~~~~~~~~~-g-~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~~-P~-~~~~~~~~AlaaGN~vi~Kps~~tp~t~~~~~~ 448 (643)
+++...+.. + ...+ ..+...+.+++|+|||++|+||| |. +.+++++|||++||+||+|||+.+|.++..+++
T Consensus 69 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~GvV~~I~P~N~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~ 144 (429)
T cd07100 69 YYAENAEAFLADEPIE----TDAGKAYVRYEPLGVVLGIMPWNFPFWQVFRFAAPNLMAGNTVLLKHASNVPGCALAIEE 144 (429)
T ss_pred HHHHHHHHhcCCeecc----CCCceEEEEEEeeeEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHH
Confidence 554332211 1 1111 11234567899999999999995 85 567899999999999999999999999999999
Q ss_pred HHHHhcccc-cCcCceEeecCcchHhHhhhCCCCccEEEeecCHHHHHHHHHhcC---CCEEEecCccceEEEcCCCCHH
Q 006484 449 VITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK---IPVLGHADGICHVYVDKSANLD 524 (643)
Q Consensus 449 l~~~a~~~a-lP~g~v~~v~~~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a~---~p~~lelGG~~p~iV~~dAdl~ 524 (643)
++.+ + ||+|++|+|+++.+.+..|..||+|++|+||||+.+|+.|++.+. ||+++|||||||+||++|||+|
T Consensus 145 ~l~~----aglP~gvv~~v~g~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~daDl~ 220 (429)
T cd07100 145 LFRE----AGFPEGVFQNLLIDSDQVEAIIADPRVRGVTLTGSERAGRAVAAEAGKNLKKSVLELGGSDPFIVLDDADLD 220 (429)
T ss_pred HHHH----cCCCcCcEEEEeCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCcceEEecCCCCeeEECCCCCHH
Confidence 9987 6 999999999953334555667899999999999999999998773 8999999999999999999999
Q ss_pred HHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC--------------------------------
Q 006484 525 VAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------------------------------- 571 (643)
Q Consensus 525 ~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~-------------------------------- 571 (643)
.|++.+++|+|.|+| .|++++|+|||+++| |+|+++|+++++++.+
T Consensus 221 ~aa~~i~~~~~~~~GQ~C~a~~rv~v~~~i~-~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ 299 (429)
T cd07100 221 KAVKTAVKGRLQNAGQSCIAAKRFIVHEDVY-DEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLRDELHEQVEEAVAA 299 (429)
T ss_pred HHHHHHHHHHHhccCCCCCCCeEEEEcHHHH-HHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHHC
Confidence 999999999999998 999999999999999 7999999998887532
Q ss_pred --EE-ecCcccc--c-cc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEecCHHHHHHHH
Q 006484 572 --GL-FGGPRAS--K-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFL 638 (643)
Q Consensus 572 --~~-~g~~~~~--~-~~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~~~~~~ 638 (643)
++ +|+.... + ++ | | ++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++
T Consensus 300 Ga~~~~gg~~~~~~g~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~ 379 (429)
T cd07100 300 GATLLLGGKRPDGPGAFYPPTVLTDVTPGMPAYDEELFGPVAAVIKVKDEEEAIALANDSPFGLGGSVFTTDLERAERVA 379 (429)
T ss_pred CCEEEeCCCcCCCCCeEEcCEEeecCCCCCHHHhCCCCCCeEEEeeeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHH
Confidence 12 2433221 2 33 5 2 35889999999999999999999999999999999999999999999999999
Q ss_pred HhcCC
Q 006484 639 CQVDR 643 (643)
Q Consensus 639 ~~l~~ 643 (643)
+++++
T Consensus 380 ~~l~~ 384 (429)
T cd07100 380 RRLEA 384 (429)
T ss_pred HhCCc
Confidence 99874
No 84
>cd07099 ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid.
Probab=100.00 E-value=2.3e-61 Score=530.99 Aligned_cols=350 Identities=17% Similarity=0.160 Sum_probs=289.5
Q ss_pred HHcCCceeeEEecCccccccHHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhch
Q 006484 270 VLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGY 349 (643)
Q Consensus 270 ~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~g~ 349 (643)
|.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|++++++|++++++|++++..
T Consensus 3 P~t~~~~~~~~~~~------~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~--- 73 (453)
T cd07099 3 PATGEVLGEVPVTD------PAEVAAAVARARAAQRAWAALGVEGRAQRLLRWKRALADHADELAELLHAETGKPRA--- 73 (453)
T ss_pred CCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH---
Confidence 56788889888887 889999999999999999999999999999999999999999999998877654321
Q ss_pred hhHHHHHhhcChhHHHHHHHHHHHHhccccc-ccc-cccccccCCCeeEEEEeeeeeeEEEEcCCC-ch-hHHHHHHHHH
Q 006484 350 AKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQ-ILKRTELADGLILEKTSCPLGVLLIVFESR-PD-ALVQIASLAI 425 (643)
Q Consensus 350 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g~-~~~~~~~~~~~~~~~~~~PlGvv~~I~p~~-P~-~~~~~~~~Al 425 (643)
++ ..++..+++.++++++..+. .+. ..+......+...+++++|+|||++|+||| |. +.+++++|||
T Consensus 74 -~~--------~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~l~~AL 144 (453)
T cd07099 74 -DA--------GLEVLLALEAIDWAARNAPRVLAPRKVPTGLLMPNKKATVEYRPYGVVGVISPWNYPLLTPMGDIIPAL 144 (453)
T ss_pred -HH--------HHHHHHHHHHHHHHHHHHHHhcCCccccCcccCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHH
Confidence 11 12444555555554432211 111 111100012345678899999999999985 86 5678999999
Q ss_pred HhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecCcchHhHhhhCCCCccEEEeecCHHHHHHHHHhc---
Q 006484 426 RSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST--- 501 (643)
Q Consensus 426 aaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a--- 501 (643)
++||+||+|||+.+|.++.++++++.+ + +|+|++|+|++....++.|.+| .||+|+||||+++|+.|++.+
T Consensus 145 aaGN~vilKps~~~p~~~~~l~~~l~~----ag~P~g~~~vv~g~~~~~~~l~~~-~vd~V~ftGs~~~g~~i~~~aa~~ 219 (453)
T cd07099 145 AAGNAVVLKPSEVTPLVGELLAEAWAA----AGPPQGVLQVVTGDGATGAALIDA-GVDKVAFTGSVATGRKVMAAAAER 219 (453)
T ss_pred HcCCEEEEECCccchHHHHHHHHHHHH----cCCCCCeEEEEeCCchHHHHHhcC-CCCEEEEECCHHHHHHHHHHHHhc
Confidence 999999999999999999999999987 6 9999999999643566666666 599999999999999999876
Q ss_pred CCCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC---------
Q 006484 502 KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV--------- 571 (643)
Q Consensus 502 ~~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~--------- 571 (643)
.+|+++|||||||+||++|||++.|++.+++++|.|+| .|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 220 ~~~~~lelgG~~p~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~ri~V~~~i~-d~f~~~l~~~~~~l~~G~~~~~~~~ 298 (453)
T cd07099 220 LIPVVLELGGKDPMIVLADADLERAAAAAVWGAMVNAGQTCISVERVYVHESVY-DEFVARLVAKARALRPGADDIGDAD 298 (453)
T ss_pred CCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHH-HHHHHHHHHHHHhccCCCCCCCCCc
Confidence 48999999999999999999999999999999999988 999999999999999 7999999999887621
Q ss_pred -------------------------EE-ecCccc--cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHH
Q 006484 572 -------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHI 615 (643)
Q Consensus 572 -------------------------~~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~deAi~~a 615 (643)
++ +|+... .+ ++ | | ++|++++||+||||++|++|+|+||||+++
T Consensus 299 ~gp~i~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~~ 378 (453)
T cd07099 299 IGPMTTARQLDIVRRHVDDAVAKGAKALTGGARSNGGGPFYEPTVLTDVPHDMDVMREETFGPVLPVMPVADEDEAIALA 378 (453)
T ss_pred ccCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCCCCeEEecEEEecCCCCCHHHhCCCcCCeeEEEeeCCHHHHHHHH
Confidence 12 244332 23 33 5 2 357899999999999999999999999999
Q ss_pred HccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 616 HQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 616 N~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
|+++|||++||||+|.+++++|++++++
T Consensus 379 n~~~~gL~~~i~t~d~~~~~~~~~~l~~ 406 (453)
T cd07099 379 NDSRYGLSASVFSRDLARAEAIARRLEA 406 (453)
T ss_pred hCCCCCCeEEEEcCCHHHHHHHHHhCCe
Confidence 9999999999999999999999999874
No 85
>cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD.
Probab=100.00 E-value=2.6e-61 Score=530.48 Aligned_cols=350 Identities=19% Similarity=0.196 Sum_probs=288.8
Q ss_pred HHcCCceeeEEecCccccccHHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhch
Q 006484 270 VLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGY 349 (643)
Q Consensus 270 ~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~g~ 349 (643)
|.+|+.++++...+ .+++++++++|++||+.|+++|..+|.++|++++++|+++.++|++++..|.+++.
T Consensus 3 P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~---- 72 (452)
T cd07102 3 PIDGSVIAERPLAS------LEAVRAALERARAAQKGWRAVPLEERKAIVTRAVELLAANTDEIAEELTWQMGRPI---- 72 (452)
T ss_pred CCCCCEEEEEcCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCH----
Confidence 56788888887777 88999999999999999999999999999999999999999999998877665432
Q ss_pred hhHHHHHhhcChhHHHHHHHHHHHHhcccccccccccccccCCCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHHHHHHHh
Q 006484 350 AKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRS 427 (643)
Q Consensus 350 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~~Alaa 427 (643)
.++. .++......++++++.++.+. +..... ...+...+.+++|+|||++|+|| +|. +.+++++|||++
T Consensus 73 ~~~~-~ev~~~~~~~~~~~~~~~~~~------~~~~~~--~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~l~~ALaa 143 (452)
T cd07102 73 AQAG-GEIRGMLERARYMISIAEEAL------ADIRVP--EKDGFERYIRREPLGVVLIIAPWNYPYLTAVNAVIPALLA 143 (452)
T ss_pred HHHH-HHHHHHHHHHHHHHHHHHHhc------CCcccC--CCCCeeEEEEEEeccEEEEEcCCchHHHHHHHHHHHHHHc
Confidence 1221 122222233444444333321 111110 12344567889999999999998 585 567899999999
Q ss_pred CCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecCcchHhHhhhCCCCccEEEeecCHHHHHHHHHhcC---C
Q 006484 428 GNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK---I 503 (643)
Q Consensus 428 GN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a~---~ 503 (643)
||+||+|||+.+|.++..+.+++.+ + +|+|++|+|++..+.+..|..||+||+|+||||+.+|++|++.++ +
T Consensus 144 GN~VVlKps~~~~~~~~~l~~~l~~----aGlP~g~~~~v~g~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~~~~ 219 (452)
T cd07102 144 GNAVILKHSPQTPLCGERFAAAFAE----AGLPEGVFQVLHLSHETSAALIADPRIDHVSFTGSVAGGRAIQRAAAGRFI 219 (452)
T ss_pred CCEEEEECCCCCcHHHHHHHHHHHh----cCCCcCcEEEEeCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999987 7 999999999953356777778999999999999999999988763 8
Q ss_pred CEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC-----------
Q 006484 504 PVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV----------- 571 (643)
Q Consensus 504 p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~----------- 571 (643)
|+++|||||||+||++|||+|.|++.+++|+|.|+| .|++++|+|||+++| |+|+++|+++++++++
T Consensus 220 ~v~lelgG~~~~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~-~~f~~~L~~~~~~l~vg~p~~~~~~~g 298 (452)
T cd07102 220 KVGLELGGKDPAYVRPDADLDAAAESLVDGAFFNSGQSCCSIERIYVHESIY-DAFVEAFVAVVKGYKLGDPLDPSTTLG 298 (452)
T ss_pred cEEEECCCCCceEEcCCCCHHHHHHHHHHHHHHhCCCCCcCCcEEEEeHHHH-HHHHHHHHHHHHhccCCCCCCCCCCCC
Confidence 999999999999999999999999999999999988 999999999999999 7999999999876532
Q ss_pred -----------------------EE-ecCcc-----ccc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHH
Q 006484 572 -----------------------GL-FGGPR-----ASK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDH 614 (643)
Q Consensus 572 -----------------------~~-~g~~~-----~~~-~~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~deAi~~ 614 (643)
++ +|+.. ..+ ++ | | ++|++++||+||||++|++|+|+||||++
T Consensus 299 pli~~~~~~~i~~~i~~a~~~ga~vl~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~ 378 (452)
T cd07102 299 PVVSARAADFVRAQIADAIAKGARALIDGALFPEDKAGGAYLAPTVLTNVDHSMRVMREETFGPVVGIMKVKSDAEAIAL 378 (452)
T ss_pred CCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCCCceEcCEEEecCCCCChhhhcCCcCCeEEEEEeCCHHHHHHH
Confidence 12 23322 112 23 5 2 35789999999999999999999999999
Q ss_pred HHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 615 IHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 615 aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
+|+++|||+++|||+|.+++.+|++++++
T Consensus 379 ~n~~~~gL~~~i~t~d~~~~~~~~~~l~~ 407 (452)
T cd07102 379 MNDSEYGLTASVWTKDIARAEALGEQLET 407 (452)
T ss_pred HhCCCCCceEEEEcCCHHHHHHHHHHcCc
Confidence 99999999999999999999999999874
No 86
>TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN. This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278.
Probab=100.00 E-value=2.6e-61 Score=530.49 Aligned_cols=352 Identities=15% Similarity=0.128 Sum_probs=279.6
Q ss_pred HHHHcCCceeeEEecCccccccHHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH-
Q 006484 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE- 346 (643)
Q Consensus 268 ~~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~- 346 (643)
.+|++++.++++...+ .++++++|++||+.|+++++.+|.++|++++++|++|.++|+.+++.|.|++..
T Consensus 70 ~~P~t~~~~~~~~~~~---------~~~av~aA~~A~~~W~~~~~~~R~~vL~~~a~~l~~~~~elA~~~~~etGk~~~~ 140 (551)
T TIGR02288 70 RSPYGVELGVTYPQCD---------GDALLDAAHAALPGWRDAGARARAGVCLEILQRLNARSFEIAHAVMHTTGQAFMM 140 (551)
T ss_pred cCCCCCCEEEEEcCCC---------HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHH
Confidence 3456777667665554 389999999999999999999999999999999999999999999887765432
Q ss_pred ---hchhhHHHHHhhcChhHHHHHHHHHHHHhcccc-cccccc---ccc-ccCCCeeEEEEeeeeeeEEEEcCC-Cch-h
Q 006484 347 ---AGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQIL---KRT-ELADGLILEKTSCPLGVLLIVFES-RPD-A 416 (643)
Q Consensus 347 ---~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~g~~~---~~~-~~~~~~~~~~~~~PlGvv~~I~p~-~P~-~ 416 (643)
.|.+. +....++.++++++... ..+... +.. ........+..++|+|||++|+|| ||. +
T Consensus 141 a~e~gkp~-----------~~~r~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vI~PwNfP~~~ 209 (551)
T TIGR02288 141 AFQAGGPH-----------AQDRGLEAVAYAYREMSRIPETAVWEKPQGKNDPLKLKKRFTIVPRGIALVIGCSTFPTWN 209 (551)
T ss_pred HHhccChH-----------HHHHHHHHHHHHHHHHHhccCcccccccCCCCCcccccceEEEEecCeEEEEcCcccHHHH
Confidence 12110 22223444444332211 112111 100 000011113478999999999998 586 4
Q ss_pred HHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecC--cchHhHhhhCCCCccEEEeecCHHH
Q 006484 417 LVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS--REEIPDLLKLDDVIDLVIPRGSNKL 493 (643)
Q Consensus 417 ~~~~~~~AlaaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~--~~~~~~~l~~~~~v~~i~fTGs~~~ 493 (643)
..++++|||++||+||+||||.||+++.++.+++.+++.++ ||+|++|+|++ +.++++.|..||+|++|+||||+++
T Consensus 210 ~~~~l~~ALaaGN~VVlKPs~~tpl~~~~~~~~l~e~l~eAGlP~gvv~lv~g~~g~~~~~~L~~~p~v~~I~FTGSt~~ 289 (551)
T TIGR02288 210 TYPGLFASLATGNPVLVKPHPGAILPLALTVQVAREVLGEAGFDPNLVTLAAFDPGHEAAQRLATDPAVRIIDFTGSNAF 289 (551)
T ss_pred HHHHHHHHHHcCCeEEEECCcccchhHHHHHHHHHHHHHHcCcChhHEEEecCCCcHHHHHHHHhCCCccEEEEECCHHH
Confidence 57999999999999999999999998886666666666668 99999999985 4567788888999999999999999
Q ss_pred HHHHHHhcC-CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCc---------cCCchhHHHH
Q 006484 494 VSQIKESTK-IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKD---------LACNGALNEL 562 (643)
Q Consensus 494 g~~i~~~a~-~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~---------i~~~~f~~~l 562 (643)
|+.|++.+. +|+++|||||||+||++|||+|.|++.+++|+|.|+| +|++++|+|||++ +| |+|+++|
T Consensus 290 G~~I~~~aa~~~v~lElGGknp~IV~~dADld~aa~~i~~~~f~~sGQ~Cta~~ri~V~~~~i~~~~g~~i~-def~~~L 368 (551)
T TIGR02288 290 GQWLEQNARQAQVYTEKAGVNTVIIESTDDYKAMLRNLAFSLSLYSGQMCTTTQAILVPRDGIRTDQGRKSY-DEVAADL 368 (551)
T ss_pred HHHHHHhcccCcEEeecCCcCeEEEcCCCCHHHHHHHHHHHHHhhCCCCCCCCCEEEEeccccccccchhHH-HHHHHHH
Confidence 999998875 8999999999999999999999999999999999998 9999999999999 79 7999999
Q ss_pred HHHHHHcCC------------------------------EEecCccc-----cc--cc-c-C----C-CCccccccccCc
Q 006484 563 VVELQHEGV------------------------------GLFGGPRA-----SK--LL-Q-I----P-ETRLFHHEYNSM 598 (643)
Q Consensus 563 ~~~~~~~~~------------------------------~~~g~~~~-----~~--~~-p-v----~-~~~~~~eE~FgP 598 (643)
+++++++ + .++|+... .+ ++ | | + +|++++||+|||
T Consensus 369 ~~~~~~l-vGdp~~~~~~~Gplis~~~~~ri~~a~~~G~v~~gG~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGP 447 (551)
T TIGR02288 369 ATAIDGL-LGDPARATAVLGAIQSPDTLARIAEARALGEVLLASTKIEHPEFPGARVRTPLLLKCDAADEAAYMQERFGP 447 (551)
T ss_pred HHHHHHh-cCCcccccccccCcCCHHHHHHHHHHHhCCCEEEcCccCCCCCCCCCEEeccEEEEcCCCCCHHHhCCCcCC
Confidence 9988875 2 12233211 12 23 4 2 3 578999999999
Q ss_pred eEEEEEeCCHHHHHHHHHcc--CCC-ceeEEEecCHHHHHHHHHhc
Q 006484 599 VCTVEIVDDVRAAIDHIHQH--GSA-HTDCIVAEDQKVAETFLCQV 641 (643)
Q Consensus 599 vl~v~~~~~~deAi~~aN~~--~~G-L~a~v~t~d~~~~~~~~~~l 641 (643)
|++|++|+|+||||+++|++ +|| |++||||+|.++++++.+++
T Consensus 448 Vl~V~~~~d~deAi~~aN~~~~~~G~Lta~VfT~d~~~~~~~~~~~ 493 (551)
T TIGR02288 448 IAFVVAVDDGAHAVELARRSVREKGAMTVGAYTTDPEVVDAVQEAA 493 (551)
T ss_pred EEEEEEECCHHHHHHHHhcCCCCCCCceEEEEeCCHHHHHHHHHHH
Confidence 99999999999999999998 667 99999999999999999886
No 87
>cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins. Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD.
Probab=100.00 E-value=3.4e-61 Score=523.72 Aligned_cols=339 Identities=21% Similarity=0.205 Sum_probs=276.5
Q ss_pred HHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhhHHHHHhhcChhHHHHHHH
Q 006484 290 QVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAK 369 (643)
Q Consensus 290 ~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~ 369 (643)
.+++++++++|++||+.|+++|.++|.++|++++++|++|+++|+++++.|++++. .++...++..+...+++++.
T Consensus 4 ~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~e~~~~ev~~~~~~~~~~a~ 79 (436)
T cd07135 4 LDEIDSIHSRLRATFRSGKTKDLEYRLWQLKQLYWAVKDNEEAIVEALKKDLGRPP----FETLLTEVSGVKNDILHMLK 79 (436)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCH----HHHhHHHHHHHHHHHHHHHH
Confidence 67999999999999999999999999999999999999999999999988876543 22222222223334444444
Q ss_pred HHHHHhcccccccccccccccCCCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHH
Q 006484 370 SIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILH 447 (643)
Q Consensus 370 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~~AlaaGN~vi~Kps~~tp~t~~~~~ 447 (643)
.++.+.....+..... . ..+...+++++|+|||++|+|| +|. +.++++++||++||+||+|||+.+|.++..++
T Consensus 80 ~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~l~ 155 (436)
T cd07135 80 NLKKWAKDEKVKDGPL---A-FMFGKPRIRKEPLGVVLIIGPWNYPVLLALSPLVGAIAAGCTVVLKPSELTPHTAALLA 155 (436)
T ss_pred HHHHhhCCcccCCccc---c-cCCCceEEEeccCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHH
Confidence 4433321111110000 0 0123456789999999999998 585 67899999999999999999999999999999
Q ss_pred HHHHHhcccccCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHHhc---CCCEEEecCccceEEEcCCCCH
Q 006484 448 KVITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---KIPVLGHADGICHVYVDKSANL 523 (643)
Q Consensus 448 ~l~~~a~~~alP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a---~~p~~lelGG~~p~iV~~dAdl 523 (643)
+++++ .||+|++|+|++ +++++.++ .|| +|.|+||||+.+|+.|++.+ .+|+++|+|||||+||++|||+
T Consensus 156 ~l~~~----~lP~g~v~vv~g~~~~~~~l~-~~~-vd~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~~~iV~~dADl 229 (436)
T cd07135 156 ELVPK----YLDPDAFQVVQGGVPETTALL-EQK-FDKIFYTGSGRVGRIIAEAAAKHLTPVTLELGGKSPVIVTKNADL 229 (436)
T ss_pred HHHHH----hCCcCEEEEEcCCchhHHHHH-hCC-CCEEEEECCcHHHHHHHHHHHhcCCCeEEEccCCCcEEECCCCCH
Confidence 99986 499999999995 55667755 678 99999999999999998866 3999999999999999999999
Q ss_pred HHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCCE------------------------------
Q 006484 524 DVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVG------------------------------ 572 (643)
Q Consensus 524 ~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~~------------------------------ 572 (643)
|.|++.+++++|.|+| .|+|++|+|||+++| |+|+++|+++++++.+.
T Consensus 230 ~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~~i~~~v~~ag~~ 308 (436)
T cd07135 230 ELAAKRILWGKFGNAGQICVAPDYVLVDPSVY-DEFVEELKKVLDEFYPGGANASPDYTRIVNPRHFNRLKSLLDTTKGK 308 (436)
T ss_pred HHHHHHHHHHHhccCCceecCCCEEeccHHHH-HHHHHHHHHHHHHhcCCCCCCCCCcCCCCCHHHHHHHHHHHHhcCCe
Confidence 9999999999999998 999999999999999 79999999988775321
Q ss_pred -EecCccc-cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEecCHHHHHHHHHhcC
Q 006484 573 -LFGGPRA-SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVD 642 (643)
Q Consensus 573 -~~g~~~~-~~-~~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~ 642 (643)
+.|+... .+ ++ | | +++.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++++++
T Consensus 309 v~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~an~~~~gL~~~v~t~d~~~a~~~~~~l~ 388 (436)
T cd07135 309 VVIGGEMDEATRFIPPTIVSDVSWDDSLMSEELFGPVLPIIKVDDLDEAIKVINSRDTPLALYIFTDDKSEIDHILTRTR 388 (436)
T ss_pred EEECCCcCCCCCEEccEEEecCCCccHHHhccccCCceEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhcCC
Confidence 1122211 12 23 5 2 357899999999999999999999999999999999999999999999999999987
Q ss_pred C
Q 006484 643 R 643 (643)
Q Consensus 643 ~ 643 (643)
+
T Consensus 389 ~ 389 (436)
T cd07135 389 S 389 (436)
T ss_pred c
Confidence 4
No 88
>PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional
Probab=100.00 E-value=3.1e-61 Score=532.03 Aligned_cols=351 Identities=19% Similarity=0.194 Sum_probs=293.1
Q ss_pred HHHHcCCceeeEEecCccccccHHhHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Q 006484 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSR--RLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 345 (643)
Q Consensus 268 ~~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~ 345 (643)
.++.+|+.++++...+ .+++++++++|++||+ .|+++|.++|.++|++++++|++|.++|+++++.|++++.
T Consensus 40 ~nP~tg~~i~~v~~~~------~~dv~~av~aA~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 113 (494)
T PRK09847 40 VDPVTQAPLAKIARGK------SVDIDRAVSAARGVFERGDWSLSSPAKRKAVLNKLADLMEAHAEELALLETLDTGKPI 113 (494)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH
Confidence 4567788889987777 8899999999999997 5999999999999999999999999999998877665432
Q ss_pred HhchhhHHHHHhhcChhHHHHHHHHHHHHhcccccc-cccccccccCCCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHHH
Q 006484 346 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 422 (643)
Q Consensus 346 ~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~ 422 (643)
.++. ..++..+++.++++++..+.. |+..+. ..+...+++|+|+|||++|+|| ||. +++++++
T Consensus 114 ----~~~~-------~~ev~~~~~~l~~~a~~~~~~~g~~~~~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~ 179 (494)
T PRK09847 114 ----RHSL-------RDDIPGAARAIRWYAEAIDKVYGEVATT---SSHELAMIVREPVGVIAAIVPWNFPLLLTCWKLG 179 (494)
T ss_pred ----HHHH-------HHHHHHHHHHHHHHHHHHHHhcCccccC---CCCceeEEEecceeEEEEECCCccHHHHHHHHHH
Confidence 1221 125666666666665543322 332221 1233457889999999999999 585 5679999
Q ss_pred HHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHHh
Q 006484 423 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 500 (643)
Q Consensus 423 ~AlaaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~ 500 (643)
|||++||+||+|||+.+|.++..+++++.+ + +|+|++|+|++ +.+.+..|..||++|+|+||||+.+|+.|++.
T Consensus 180 ~ALaaGN~VvlKps~~~p~~~~~l~~~~~~----aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~v~fTGs~~~g~~v~~~ 255 (494)
T PRK09847 180 PALAAGNSVILKPSEKSPLSAIRLAGLAKE----AGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKD 255 (494)
T ss_pred HHHHcCCEEEEeCCCCChHHHHHHHHHHHH----cCcCcCcEEEEeCCChhHHHHHhcCCCCCEEEEECCHHHHHHHHHH
Confidence 999999999999999999999999999887 7 99999999995 55567777789999999999999999999886
Q ss_pred c----CCCEEEecCccceEEEcCCC-CHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC---
Q 006484 501 T----KIPVLGHADGICHVYVDKSA-NLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV--- 571 (643)
Q Consensus 501 a----~~p~~lelGG~~p~iV~~dA-dl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~--- 571 (643)
+ .+|+.+|||||||+||++|+ |+|.|++.+++|+|.|+| .|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 256 aa~~~~~~~~lElGGk~~~iV~~daaDl~~Aa~~i~~~~~~~aGQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p 334 (494)
T PRK09847 256 AGDSNMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIA-DEFLALLKQQAQNWQPGHP 334 (494)
T ss_pred hhhhCCCeEEEecCCCCeeEEcCCccCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHH-HHHHHHHHHHHHhcCCCCC
Confidence 5 38999999999999999997 999999999999999998 999999999999999 7999999999887631
Q ss_pred ------------------------------EE-ecCccc--cccc-c-C-----CCCccccccccCceEEEEEeCCHHHH
Q 006484 572 ------------------------------GL-FGGPRA--SKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAA 611 (643)
Q Consensus 572 ------------------------------~~-~g~~~~--~~~~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~deA 611 (643)
++ .|+... ..++ | | +++++++||+||||++|++|+|+|||
T Consensus 335 ~~~~~~~gpli~~~~~~~v~~~v~~a~~~G~i~~gg~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~ea 414 (494)
T PRK09847 335 LDPATTMGTLIDCAHADSVHSFIREGESKGQLLLDGRNAGLAAAIGPTIFVDVDPNASLSREEIFGPVLVVTRFTSEEQA 414 (494)
T ss_pred CCCCCcCCCCcCHHHHHHHHHHHHHHHHCCeEEECCccCCCCceEeeEEEeCCCCCChHHhCcCcCceEEEEecCCHHHH
Confidence 11 233211 1233 4 2 35789999999999999999999999
Q ss_pred HHHHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 612 IDHIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 612 i~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
|+++|+++|||++||||+|.+++.+|++++++
T Consensus 415 i~~~n~~~~gLsa~v~t~d~~~a~~~~~~l~~ 446 (494)
T PRK09847 415 LQLANDSQYGLGAAVWTRDLSRAHRMSRRLKA 446 (494)
T ss_pred HHHHhCCCCCceEEEEcCCHHHHHHHHHhCCc
Confidence 99999999999999999999999999999875
No 89
>cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like. The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD.
Probab=100.00 E-value=2.6e-61 Score=532.58 Aligned_cols=351 Identities=18% Similarity=0.169 Sum_probs=291.9
Q ss_pred HHHHcCCceeeEEecCccccccHHhHHHHHHHHHHHHHH--HhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Q 006484 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRR--LQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 345 (643)
Q Consensus 268 ~~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~--w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~ 345 (643)
.+|.+|+.++++...+ .+++++++++|++||+. |+++|.++|.++|++++++|++|.++|+++++.|++++.
T Consensus 19 ~~P~tg~~i~~~~~~~------~~~v~~av~~a~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 92 (471)
T cd07139 19 VSPATEEVVGRVPEAT------PADVDAAVAAARRAFDNGPWPRLSPAERAAVLRRLADALEARADELARLWTAENGMPI 92 (471)
T ss_pred ECCCCCCEeEEEeCCC------HHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH
Confidence 4466788888887777 88999999999999985 999999999999999999999999999998877665432
Q ss_pred HhchhhHHHHHhhcChhHHHHHHHHHHHHhcccccc-c-ccccccccCCCeeEEEEeeeeeeEEEEcCCC-ch-hHHHHH
Q 006484 346 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-G-QILKRTELADGLILEKTSCPLGVLLIVFESR-PD-ALVQIA 421 (643)
Q Consensus 346 ~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-g-~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~~-P~-~~~~~~ 421 (643)
.++. ..++..+++.++++++..+.. + ...+. ..+...+..|+|+|||++|+||| |. +.++++
T Consensus 93 ----~~~~-------~~ev~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~i 158 (471)
T cd07139 93 ----SWSR-------RAQGPGPAALLRYYAALARDFPFEERRPG---SGGGHVLVRREPVGVVAAIVPWNAPLFLAALKI 158 (471)
T ss_pred ----HHHH-------HHHHHHHHHHHHHHHHHHHHhcCCccccC---CCCceEEEEEEeccEEEEEcCCchHHHHHHHHH
Confidence 1111 124555666666665433211 1 11111 12345678899999999999995 85 567999
Q ss_pred HHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecCcchHhHhhhCCCCccEEEeecCHHHHHHHHHh
Q 006484 422 SLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 500 (643)
Q Consensus 422 ~~AlaaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~ 500 (643)
++||++||+||+|||+.+|+++..+.+++.+ + ||+|++|+|+++.+.+..|..||++++|+||||+.+|+.|++.
T Consensus 159 ~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~----aglP~gv~~~v~g~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~ 234 (471)
T cd07139 159 APALAAGCTVVLKPSPETPLDAYLLAEAAEE----AGLPPGVVNVVPADREVGEYLVRHPGVDKVSFTGSTAAGRRIAAV 234 (471)
T ss_pred HHHHhcCCEEEEECCCcCCHHHHHHHHHHHH----cCCCCCcEEEEeCCHHHHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence 9999999999999999999999999999987 7 9999999999654567777789999999999999999999887
Q ss_pred cC---CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC-----
Q 006484 501 TK---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV----- 571 (643)
Q Consensus 501 a~---~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~----- 571 (643)
++ +|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|++|+|||+++| |+|+++|+++++++++
T Consensus 235 ~~~~~~~~~lElGG~np~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~-d~f~~~l~~~~~~~~~g~p~~ 313 (471)
T cd07139 235 CGERLARVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRSRY-DEVVEALAAAVAALKVGDPLD 313 (471)
T ss_pred HHhcCCEEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHhHH-HHHHHHHHHHHHhCCcCCCCC
Confidence 63 8999999999999999999999999999999999988 999999999999999 7999999999877531
Q ss_pred -----------------------------EE-ecCccc----ccc-c-c-C-----CCCccccccccCceEEEEEeCCHH
Q 006484 572 -----------------------------GL-FGGPRA----SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 609 (643)
Q Consensus 572 -----------------------------~~-~g~~~~----~~~-~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~d 609 (643)
++ +|+... .++ + | | +++++++||+||||++|++|+|+|
T Consensus 314 ~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~ 393 (471)
T cd07139 314 PATQIGPLASARQRERVEGYIAKGRAEGARLVTGGGRPAGLDRGWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDDED 393 (471)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEEecCCCcchHHhCccCCCeEEEeecCCHH
Confidence 11 233221 132 3 5 2 357899999999999999999999
Q ss_pred HHHHHHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 610 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 610 eAi~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
|||+++|+++|||+++|||+|.+++.+|++++++
T Consensus 394 eai~~~n~~~~gL~a~i~s~d~~~~~~~~~~l~~ 427 (471)
T cd07139 394 DAVRIANDSDYGLSGSVWTADVERGLAVARRIRT 427 (471)
T ss_pred HHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCc
Confidence 9999999999999999999999999999999874
No 90
>cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like. NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency.
Probab=100.00 E-value=3.6e-61 Score=529.05 Aligned_cols=351 Identities=19% Similarity=0.209 Sum_probs=293.4
Q ss_pred HHHcCCceeeEEecCccccccHHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhc
Q 006484 269 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 348 (643)
Q Consensus 269 ~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~g 348 (643)
+|.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|+++.++|++++.+|++++..
T Consensus 3 ~P~t~~~i~~~~~~~------~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~~~~l~~~~~~l~~~~~~e~Gk~~~-- 74 (450)
T cd07092 3 DPATGEEIATVPDAS------AADVDAAVAAAHAAFPSWRRTTPAERSKALLKLADAIEENAEELAALESRNTGKPLH-- 74 (450)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHH--
Confidence 356788889987777 889999999999999999999999999999999999999999999998877654321
Q ss_pred hhhHHHHHhhcChhHHHHHHHHHHHHhcccccc-cccccccccCCCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHHHHHH
Q 006484 349 YAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAI 425 (643)
Q Consensus 349 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~~Al 425 (643)
+.. ..++..+++.+++++...+.. +.... .. ..+...+.+|+|+|||++|+|| +|. +.++++++||
T Consensus 75 --~~~-------~~ev~~~i~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL 143 (450)
T cd07092 75 --LVR-------DDELPGAVDNFRFFAGAARTLEGPAAG-EY-LPGHTSMIRREPIGVVAQIAPWNYPLMMAAWKIAPAL 143 (450)
T ss_pred --HHH-------HHHHHHHHHHHHHHHHHHHHhcCcccC-cc-CCCceeEEEEeccceEEEECCCCcHHHHHHHHHHHHH
Confidence 111 125666777777666433322 11111 11 1233456789999999999998 586 4579999999
Q ss_pred HhCCEEEEeCCcchHHHHHHHHHHHHHhcccccCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHHhc---
Q 006484 426 RSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST--- 501 (643)
Q Consensus 426 aaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~alP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a--- 501 (643)
++||+||+|||+.+|.++.++.+++++ .||+|++|+|++ +++.++.|..||++|+|+||||+.+|+.|++.+
T Consensus 144 ~aGN~VIlKps~~~~~~~~~l~~~~~~----glP~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a~~~ 219 (450)
T cd07092 144 AAGNTVVLKPSETTPLTTLLLAELAAE----VLPPGVVNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAADT 219 (450)
T ss_pred HcCCEEEEECCccchHHHHHHHHHHHh----cCCcccEEEeecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhc
Confidence 999999999999999999999999976 499999999995 444677777899999999999999999999877
Q ss_pred CCCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCCE--------
Q 006484 502 KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVG-------- 572 (643)
Q Consensus 502 ~~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~~-------- 572 (643)
.+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|++++|+|||+++| |+|+++|+++++++++.
T Consensus 220 ~~~~~lelgG~~p~iV~~dAdl~~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~-~~f~~~l~~~~~~~~~g~p~~~~~~ 298 (450)
T cd07092 220 LKRVHLELGGKAPVIVFDDADLDAAVAGIATAGYYNAGQDCTAACRVYVHESVY-DEFVAALVEAVSAIRVGDPDDEDTE 298 (450)
T ss_pred CCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhhCCCCCCCCcEEEEeHHHH-HHHHHHHHHHHhhCCcCCCCCCCCc
Confidence 38999999999999999999999999999999999988 999999999999999 79999999999876321
Q ss_pred -------------------------E-ecCccc--cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHH
Q 006484 573 -------------------------L-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIH 616 (643)
Q Consensus 573 -------------------------~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~deAi~~aN 616 (643)
+ +|+... .+ ++ | | +++++++||+||||++|++|+|+||||+++|
T Consensus 299 ~gpli~~~~~~~i~~~i~~a~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n 378 (450)
T cd07092 299 MGPLNSAAQRERVAGFVERAPAHARVLTGGRRAEGPGYFYEPTVVAGVAQDDEIVQEEIFGPVVTVQPFDDEDEAIELAN 378 (450)
T ss_pred cCcccCHHHHHHHHHHHHHHHcCCEEEeCCCCCCCCccEEeeEEEEcCCCCChHHhCCCcCceEEEEEECCHHHHHHHHh
Confidence 1 122211 12 23 5 2 3588999999999999999999999999999
Q ss_pred ccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 617 QHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 617 ~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
+++|||++||||+|.++++++++++++
T Consensus 379 ~~~~gL~~~vft~d~~~~~~~~~~l~~ 405 (450)
T cd07092 379 DVEYGLASSVWTRDVGRAMRLSARLDF 405 (450)
T ss_pred CCCCCceEEEECCCHHHHHHHHHhcCc
Confidence 999999999999999999999999874
No 91
>cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like. Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence.
Probab=100.00 E-value=3.2e-61 Score=529.51 Aligned_cols=342 Identities=18% Similarity=0.188 Sum_probs=287.3
Q ss_pred HHHHcCCceeeEEecCccccccHHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Q 006484 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (643)
Q Consensus 268 ~~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~ 347 (643)
.++.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|++|.++|++++++|++++.
T Consensus 42 ~nP~t~~~i~~~~~a~------~~~v~~ai~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-- 113 (480)
T cd07111 42 INPATGEVLASVLQAE------EEDVDAAVAAARTAFESWSALPGHVRARHLYRIARHIQKHQRLFAVLESLDNGKPI-- 113 (480)
T ss_pred ECCCCCCEEEEEcCCC------HHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH--
Confidence 4566788889887777 88999999999999999999999999999999999999999999998877665432
Q ss_pred chhhHHHHHhhcChhHHHHHHHHHHHHhcccccccccccccccCCCeeEEEEeeeeeeEEEEcCCC-ch-hHHHHHHHHH
Q 006484 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESR-PD-ALVQIASLAI 425 (643)
Q Consensus 348 g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~~-P~-~~~~~~~~Al 425 (643)
.++.. .++...++.+++++++.+... + .+..++|+|||++|+||| |. +.++++++||
T Consensus 114 --~~a~~-------~ev~~~~~~~~~~~~~~~~~~----------~--~~~~~~P~GVV~~I~PwN~P~~~~~~~i~~AL 172 (480)
T cd07111 114 --RESRD-------CDIPLVARHFYHHAGWAQLLD----------T--ELAGWKPVGVVGQIVPWNFPLLMLAWKICPAL 172 (480)
T ss_pred --HHHHH-------HHHHHHHHHHHHHHHHHHHhc----------C--CcccceecceEEEECCCccHHHHHHHHHHHHH
Confidence 12211 245555555555543322110 1 123579999999999994 85 5679999999
Q ss_pred HhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecCcchHhHhhhCCCCccEEEeecCHHHHHHHHHhc---
Q 006484 426 RSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST--- 501 (643)
Q Consensus 426 aaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a--- 501 (643)
++||+||+|||+.+|.++..+++++.+ + ||+|++|+|++..+++..|..||++|+|+||||+.+|+.|++.+
T Consensus 173 aaGN~VVlKps~~tp~~~~~l~~~~~~----aGlP~gvv~~v~g~~~~~~~l~~~~~v~~v~ftGs~~~g~~v~~~aa~~ 248 (480)
T cd07111 173 AMGNTVVLKPAEYTPLTALLFAEICAE----AGLPPGVLNIVTGNGSFGSALANHPGVDKVAFTGSTEVGRALRRATAGT 248 (480)
T ss_pred HcCCEEEEECCCCChHHHHHHHHHHHh----cCCCcccEEEEeCCchHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhcc
Confidence 999999999999999999999999887 7 99999999996445677778899999999999999999998876
Q ss_pred CCCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC---------
Q 006484 502 KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV--------- 571 (643)
Q Consensus 502 ~~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~--------- 571 (643)
.+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|++++|+|||+++| |+|+++|+++++++++
T Consensus 249 ~~~~~lElGGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~a~~ri~V~~~i~-d~f~~~l~~~~~~~~vg~p~~~~~~ 327 (480)
T cd07111 249 GKKLSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVA-EELIRKLKERMSHLRVGDPLDKAID 327 (480)
T ss_pred CCcEEEEcCCCceEEECCCCCHHHHHHHHHHHHHhcCCCcCcCCceEEEcHHHH-HHHHHHHHHHHHhcCCCCCCCCCCc
Confidence 38999999999999999999999999999999999987 999999999999999 7999999999887632
Q ss_pred -------------------------EE-ecCcc--cccc-c-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHH
Q 006484 572 -------------------------GL-FGGPR--ASKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHI 615 (643)
Q Consensus 572 -------------------------~~-~g~~~--~~~~-~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~deAi~~a 615 (643)
.+ .|+.. ..++ + | | +++++++||+||||++|++|+|+||||+++
T Consensus 328 ~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~deai~~~ 407 (480)
T cd07111 328 MGAIVDPAQLKRIRELVEEGRAEGADVFQPGADLPSKGPFYPPTLFTNVPPASRIAQEEIFGPVLVVLTFRTAKEAVALA 407 (480)
T ss_pred cccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcCCCCCCeeEeecCCCHHHHHHHH
Confidence 11 12211 1122 2 5 2 357899999999999999999999999999
Q ss_pred HccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 616 HQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 616 N~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
|+++|||++||||+|.+++.++++++++
T Consensus 408 n~~~~gL~~~i~t~d~~~~~~~~~~l~a 435 (480)
T cd07111 408 NNTPYGLAASVWSENLSLALEVALSLKA 435 (480)
T ss_pred hCCCCCceEEEEcCCHHHHHHHHHhCCE
Confidence 9999999999999999999999999874
No 92
>cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins. Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress.
Probab=100.00 E-value=5.3e-61 Score=521.60 Aligned_cols=330 Identities=21% Similarity=0.243 Sum_probs=269.2
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhhHHHHHhhcChhHHHHHHHHHHHH
Q 006484 295 EMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRIL 374 (643)
Q Consensus 295 ~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~~ 374 (643)
+++++|++||+.|+.+|.++|.++|++++++|++++++|+++++.|++++. .++... ++..+++.++++
T Consensus 3 ~a~~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~a~~~-------ev~~~~~~~~~~ 71 (432)
T cd07137 3 RLVRELRETFRSGRTRSAEWRKSQLKGLLRLVDENEDDIFAALRQDLGKPS----AESFRD-------EVSVLVSSCKLA 71 (432)
T ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCH----HHHHHH-------HHHHHHHHHHHH
Confidence 588899999999999999999999999999999999999999988876542 233222 344444444444
Q ss_pred hccccc-ccc---cccccccCCCeeEEEEeeeeeeEEEEcCCC-ch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHH
Q 006484 375 ADMEEP-IGQ---ILKRTELADGLILEKTSCPLGVLLIVFESR-PD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHK 448 (643)
Q Consensus 375 ~~~~~~-~g~---~~~~~~~~~~~~~~~~~~PlGvv~~I~p~~-P~-~~~~~~~~AlaaGN~vi~Kps~~tp~t~~~~~~ 448 (643)
+..... .+. ..+... .....+++|+|+|||++|+||| |. +.+++++|||++||+||+|||+.||.|+.++++
T Consensus 72 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~ 149 (432)
T cd07137 72 IKELKKWMAPEKVKTPLTT--FPAKAEIVSEPLGVVLVISAWNFPFLLSLEPVIGAIAAGNAVVLKPSELAPATSALLAK 149 (432)
T ss_pred HHHHHHHhCCcccCCCccc--CCceeEEEEecCcEEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcChHHHHHHHH
Confidence 322110 111 011101 1224567899999999999985 85 567999999999999999999999999999999
Q ss_pred HHHHhcccccCcCceEeecCcchHhHhhhCCCCccEEEeecCHHHHHHHHHhc---CCCEEEecCccceEEEcCCCCHHH
Q 006484 449 VITSAIPDTVGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---KIPVLGHADGICHVYVDKSANLDV 525 (643)
Q Consensus 449 l~~~a~~~alP~g~v~~v~~~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a---~~p~~lelGG~~p~iV~~dAdl~~ 525 (643)
++.+ ++|+|++|+|+++.+.+..|..| .+++|+||||+.+|++|++.+ .+|+++|||||||+||++|||+|.
T Consensus 150 ~~~~----~~P~gvv~~v~g~~~~~~~L~~~-~i~~v~fTGs~~~g~~v~~~aa~~~~~~~lElgG~np~iV~~dAdl~~ 224 (432)
T cd07137 150 LIPE----YLDTKAIKVIEGGVPETTALLEQ-KWDKIFFTGSPRVGRIIMAAAAKHLTPVTLELGGKCPVIVDSTVDLKV 224 (432)
T ss_pred HHHH----hCCcCeEEEEeCCHHHHHHHHhC-CCCEEEEECChHHHHHHHHHHHhcCCcEEEEccCCCcEEEcCCCCHHH
Confidence 9987 49999999999644455555556 599999999999999998877 499999999999999999999999
Q ss_pred HHHHHHhhcC-CCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC--------------------------------
Q 006484 526 AKNIVIDAKI-DYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------------------------------- 571 (643)
Q Consensus 526 A~~~iv~~~~-~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~-------------------------------- 571 (643)
|++.+++|+| .|+| .|+|++|+|||+++| |+|+++|+++++++..
T Consensus 225 aa~~i~~~~f~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~~v~~~i~~a~~ga 303 (432)
T cd07137 225 AVRRIAGGKWGCNNGQACIAPDYVLVEESFA-PTLIDALKNTLEKFFGENPKESKDLSRIVNSHHFQRLSRLLDDPSVAD 303 (432)
T ss_pred HHHHHHHHhhhccCCCcccCCCEEEEcHHHH-HHHHHHHHHHHHHHhCCCCCccCCcCCcCCHHHHHHHHHHHHHHHhCC
Confidence 9999999999 4887 999999999999999 7999999998887521
Q ss_pred E-EecCccc-ccc-c-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEecCHHHHHHHHHhc
Q 006484 572 G-LFGGPRA-SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQV 641 (643)
Q Consensus 572 ~-~~g~~~~-~~~-~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~~~~~~~~l 641 (643)
. ++|+... .++ + | | ++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.+|++++
T Consensus 304 ~~l~gg~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l 383 (432)
T cd07137 304 KIVHGGERDEKNLYIEPTILLDPPLDSSIMTEEIFGPLLPIITVKKIEESIEIINSRPKPLAAYVFTKNKELKRRIVAET 383 (432)
T ss_pred eEEeCCCcCCCCCEEeeEEEecCCCcchhhhcccccCceEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhC
Confidence 1 2243321 232 3 5 2 35789999999999999999999999999999999999999999999999999998
Q ss_pred CC
Q 006484 642 DR 643 (643)
Q Consensus 642 ~~ 643 (643)
++
T Consensus 384 ~~ 385 (432)
T cd07137 384 SS 385 (432)
T ss_pred Cc
Confidence 74
No 93
>TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus.
Probab=100.00 E-value=6.6e-61 Score=529.02 Aligned_cols=350 Identities=16% Similarity=0.160 Sum_probs=291.7
Q ss_pred HHHHcCCceeeEEecCccccccHHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Q 006484 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (643)
Q Consensus 268 ~~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~ 347 (643)
.+|.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|++++++|++++..+.+++.
T Consensus 21 ~~P~t~~~i~~~~~~~------~~~v~~ai~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~-- 92 (477)
T TIGR01722 21 TNPATNEVTTKVAFAS------VDEVDAAVASARETFLTWGQTSLAQRTSVLLRYQALLKEHRDEIAELITAEHGKTH-- 92 (477)
T ss_pred eCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCH--
Confidence 4567888899988888 88999999999999999999999999999999999999999999998876665432
Q ss_pred chhhHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHHHHH
Q 006484 348 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 424 (643)
Q Consensus 348 g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~~A 424 (643)
.++ ..++..+++.+++++...+. .|...+. ...+...+.+++|+|||++|+|| +|. +.++++++|
T Consensus 93 --~~a--------~~ev~~~i~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~A 160 (477)
T TIGR01722 93 --SDA--------LGDVARGLEVVEHACGVNSLLKGETSTQ--VATRVDVYSIRQPLGVCAGITPFNFPAMIPLWMFPIA 160 (477)
T ss_pred --HHH--------HHHHHHHHHHHHHHHHHHHHhcCccccc--CCCCceEEEEEcccceEEEEccCChHHHHHHHHHHHH
Confidence 222 23566666666665543321 2222211 01234457789999999999998 486 456999999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecCcchHhHhhhCCCCccEEEeecCHHHHHHHHHhc--
Q 006484 425 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 501 (643)
Q Consensus 425 laaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a-- 501 (643)
|++||+||+|||+++|.++..+++++++ + +|+|++|+|+++.+.++.|..||+|++|+||||+.+|+.|++.+
T Consensus 161 LaaGN~VilKps~~~p~~~~~l~~~l~~----aglP~g~~~~v~g~~~~~~~L~~~~~v~~V~ftGS~~~g~~v~~~a~~ 236 (477)
T TIGR01722 161 IACGNTFVLKPSEKVPSAAVKLAELFSE----AGAPDGVLNVVHGDKEAVDRLLEHPDVKAVSFVGSTPIGRYIHTTGSA 236 (477)
T ss_pred HhcCCEEEeeCcccChHHHHHHHHHHHH----hCcCCCeEEEEeCCHHHHHHHHcCCCcCEEEEECCHHHHHHHHHHHHh
Confidence 9999999999999999999999999987 7 99999999996444566667789999999999999999998876
Q ss_pred -CCCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcC---------
Q 006484 502 -KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEG--------- 570 (643)
Q Consensus 502 -~~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~--------- 570 (643)
.||+++|||||||+||++|||+|.|++.+++++|.|+| .|++++|+|||+++ | +|+++|+++++++.
T Consensus 237 ~~~~v~lElGG~n~~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~rl~v~~~~-~-~f~~~l~~~~~~~~~G~~~~~~~ 314 (477)
T TIGR01722 237 HGKRVQALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAISAAVLVGAA-D-EWVPEIRERAEKIRIGPGDDPGA 314 (477)
T ss_pred cCCeEEEECCCCCceEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeCcH-H-HHHHHHHHHHhcCCCCCCCCCCC
Confidence 38999999999999999999999999999999999988 99999999999998 5 99999999987653
Q ss_pred -------------------------CEEe-cCccc------cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHH
Q 006484 571 -------------------------VGLF-GGPRA------SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 610 (643)
Q Consensus 571 -------------------------~~~~-g~~~~------~~-~~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~de 610 (643)
++++ |+... .+ ++ | | +++.+++||+||||++|++|+|+||
T Consensus 315 ~~Gp~i~~~~~~~~~~~i~~a~~~Ga~il~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~V~~~~~~~e 394 (477)
T TIGR01722 315 EMGPLITPQAKDRVASLIAGGAAEGAEVLLDGRGYKVDGYEEGNWVGPTLLERVPPTMKAYQEEIFGPVLCVLEADTLEE 394 (477)
T ss_pred CcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeEECCEEeeCCCCCChhhhCCCCCCeEEEEEeCCHHH
Confidence 2222 33221 12 23 5 2 3578999999999999999999999
Q ss_pred HHHHHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 611 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 611 Ai~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
||+++|+++|||++||||+|.+++++|++++++
T Consensus 395 ai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~ 427 (477)
T TIGR01722 395 AIALINASPYGNGTAIFTRDGAAARRFQHEIEV 427 (477)
T ss_pred HHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCe
Confidence 999999999999999999999999999999874
No 94
>cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like. Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD.
Probab=100.00 E-value=7.4e-61 Score=522.96 Aligned_cols=333 Identities=20% Similarity=0.244 Sum_probs=279.3
Q ss_pred hHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhhHHHHHhhcChhHHHHHHHHH
Q 006484 292 GAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSI 371 (643)
Q Consensus 292 ~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~ 371 (643)
++++++++|++||+.|+++|.++|.++|++++++|++|.++|+++++.|++++.. ++ ..++..+++.+
T Consensus 1 ~v~~ai~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~----~~--------~~ei~~~~~~l 68 (432)
T cd07105 1 DADQAVEAAAAAFPAWSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGATAA----WA--------GFNVDLAAGML 68 (432)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCCHH----HH--------HHHHHHHHHHH
Confidence 4789999999999999999999999999999999999999999998877654321 11 23566667777
Q ss_pred HHHhcccccc-cccccccccCCCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHH
Q 006484 372 RILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHK 448 (643)
Q Consensus 372 ~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~~AlaaGN~vi~Kps~~tp~t~~~~~~ 448 (643)
+++++..+.. +...+.. ..+...+.+++|+|||++|+|| +|. ++++++++||++||+||+|||+.+|.|+..+.+
T Consensus 69 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~ 146 (432)
T cd07105 69 REAASLITQIIGGSIPSD--KPGTLAMVVKEPVGVVLGIAPWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTHWLIGR 146 (432)
T ss_pred HHHHHHHHHhcCeecccC--CCCceeEEEEecceEEEEECCcCcHHHHHHHHHHHHHhcCCEEEEECCccChHHHHHHHH
Confidence 7766543321 2222211 1234557889999999999999 485 567899999999999999999999999999999
Q ss_pred HHHHhcccc-cCcCceEeecCc----chHhHhhhCCCCccEEEeecCHHHHHHHHHhc---CCCEEEecCccceEEEcCC
Q 006484 449 VITSAIPDT-VGEKLIGLVTSR----EEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---KIPVLGHADGICHVYVDKS 520 (643)
Q Consensus 449 l~~~a~~~a-lP~g~v~~v~~~----~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a---~~p~~lelGG~~p~iV~~d 520 (643)
++.+ + ||+|++|+|++. .++++.|..||+||+|+||||+.+|+.|++.+ .+|+++|||||||+||++|
T Consensus 147 ~~~~----aGlP~gv~~~v~g~~~~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElgGk~p~iV~~d 222 (432)
T cd07105 147 VFHE----AGLPKGVLNVVTHSPEDAPEVVEALIAHPAVRKVNFTGSTRVGRIIAETAAKHLKPVLLELGGKAPAIVLED 222 (432)
T ss_pred HHHH----cCcCCCcEEEEeCCCCchHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEeCCCCCceEECCC
Confidence 9987 6 999999999842 23567777899999999999999999999876 3899999999999999999
Q ss_pred CCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcC-----------------------------
Q 006484 521 ANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEG----------------------------- 570 (643)
Q Consensus 521 Adl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~----------------------------- 570 (643)
||+|.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++.
T Consensus 223 adl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~-~~f~~~l~~~~~~~~~g~~~~gp~i~~~~~~~~~~~i~~a~~~g 301 (432)
T cd07105 223 ADLDAAANAALFGAFLNSGQICMSTERIIVHESIA-DEFVEKLKAAAEKLFAGPVVLGSLVSAAAADRVKELVDDALSKG 301 (432)
T ss_pred CCHHHHHHHHHHHHHhcCCCCCcCCceEEEcHHHH-HHHHHHHHHHHHhhcCCCCcccccCCHHHHHHHHHHHHHHHHCC
Confidence 9999999999999999998 999999999999999 799999999887543
Q ss_pred CEE-ecCccc---cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEecCHHHHHHHH
Q 006484 571 VGL-FGGPRA---SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFL 638 (643)
Q Consensus 571 ~~~-~g~~~~---~~-~~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~~~~~~ 638 (643)
.++ .|+... .+ ++ | | +++.+++||+||||++|++|+|.||||+++|+++|||++||||+|.+++++++
T Consensus 302 a~~~~gg~~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~ 381 (432)
T cd07105 302 AKLVVGGLADESPSGTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVKDEEEAVRIANDSEYGLSAAVFTRDLARALAVA 381 (432)
T ss_pred CEEEeCCCcCCCCCCeEEeeEEEecCCCCCHHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHH
Confidence 222 344322 23 33 5 2 35789999999999999999999999999999999999999999999999999
Q ss_pred HhcCC
Q 006484 639 CQVDR 643 (643)
Q Consensus 639 ~~l~~ 643 (643)
+++++
T Consensus 382 ~~l~~ 386 (432)
T cd07105 382 KRIES 386 (432)
T ss_pred HhCCc
Confidence 99874
No 95
>cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like. NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD.
Probab=100.00 E-value=6.5e-61 Score=527.03 Aligned_cols=350 Identities=19% Similarity=0.227 Sum_probs=291.9
Q ss_pred HHHcCCceeeEEecCccccccHHhHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Q 006484 269 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSR--RLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 346 (643)
Q Consensus 269 ~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~ 346 (643)
++.+|+.++++...+ .+++++++++|++||+ .|+++|.++|.++|++++++|++|.++|++++..|++++..
T Consensus 8 ~P~t~~~i~~~~~~~------~~~v~~av~~a~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 81 (462)
T cd07112 8 NPATGRVLAEVAACD------AADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADLIEAHRDELALLETLDMGKPIS 81 (462)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHH
Confidence 356788889987777 8899999999999998 49999999999999999999999999999998877655421
Q ss_pred hchhhHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCeeEEEEeeeeeeEEEEcCCC-ch-hHHHHHHH
Q 006484 347 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFESR-PD-ALVQIASL 423 (643)
Q Consensus 347 ~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~~-P~-~~~~~~~~ 423 (643)
++.. .++..+++.+++++...+. .+...+. ..+...+..|+|+|||++|+||| |. +.+++++|
T Consensus 82 ----~a~~-------~ev~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GvV~~i~p~N~P~~~~~~~~~~ 147 (462)
T cd07112 82 ----DALA-------VDVPSAANTFRWYAEAIDKVYGEVAPT---GPDALALITREPLGVVGAVVPWNFPLLMAAWKIAP 147 (462)
T ss_pred ----HHHH-------HHHHHHHHHHHHHHHHHHHhcCceecC---CCCeEEEEEEeeeeeEEEECCCchHHHHHHHHHHH
Confidence 2211 2444555555554433221 1221111 12344567899999999999994 85 56799999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHHhc
Q 006484 424 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 501 (643)
Q Consensus 424 AlaaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a 501 (643)
||++||+||+|||+.+|.|+..+++++.+ + ||+|++|+|++ +.++++.|..||++|+|+||||+.+|+.|++.+
T Consensus 148 ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~----aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~a 223 (462)
T cd07112 148 ALAAGNSVVLKPAEQSPLTALRLAELALE----AGLPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYS 223 (462)
T ss_pred HHHcCCeeeeeCCCCCCHHHHHHHHHHHh----cCCCCCcEEEEeCCCchHHHHHhcCCCcCEEEEECCHHHHHHHHHHH
Confidence 99999999999999999999999999987 7 99999999995 556788888899999999999999999998754
Q ss_pred ----CCCEEEecCccceEEEcCCC-CHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC----
Q 006484 502 ----KIPVLGHADGICHVYVDKSA-NLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV---- 571 (643)
Q Consensus 502 ----~~p~~lelGG~~p~iV~~dA-dl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~---- 571 (643)
.||+++|||||||+||++|| |+|.|++.+++|+|.|+| .|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 224 a~~~~~~~~lelgG~n~~iV~~da~dl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~-~~f~~~l~~~~~~~~~g~p~ 302 (462)
T cd07112 224 GQSNLKRVWLECGGKSPNIVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIK-DEFLEKVVAAAREWKPGDPL 302 (462)
T ss_pred HHhcCCEEEecCCCCCeEEECCCCcCHHHHHHHHHHHHHhccCCCCCCCeeEEEcHHHH-HHHHHHHHHHHhcCCcCCCC
Confidence 38999999999999999999 999999999999999988 999999999999999 7999999999876532
Q ss_pred ------------------------------EE-ecCccc----cc-cc-c-C-----CCCccccccccCceEEEEEeCCH
Q 006484 572 ------------------------------GL-FGGPRA----SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDV 608 (643)
Q Consensus 572 ------------------------------~~-~g~~~~----~~-~~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~ 608 (643)
++ +|+... .+ ++ | | +++++++||+||||++|++|+|+
T Consensus 303 ~~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~ 382 (462)
T cd07112 303 DPATRMGALVSEAHFDKVLGYIESGKAEGARLVAGGKRVLTETGGFFVEPTVFDGVTPDMRIAREEIFGPVLSVITFDSE 382 (462)
T ss_pred CCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEecCCCCCChHHhCCCCCceEEEEEeCCH
Confidence 22 244321 13 23 5 2 35899999999999999999999
Q ss_pred HHHHHHHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 609 RAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 609 deAi~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
||||+++|+++|||++||||+|.+++.++++++++
T Consensus 383 ~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~ 417 (462)
T cd07112 383 EEAVALANDSVYGLAASVWTSDLSRAHRVARRLRA 417 (462)
T ss_pred HHHHHHHhCCCccceEEEEcCCHHHHHHHHHhcCc
Confidence 99999999999999999999999999999999874
No 96
>TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain). This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase.
Probab=100.00 E-value=6e-61 Score=528.85 Aligned_cols=364 Identities=17% Similarity=0.189 Sum_probs=300.6
Q ss_pred HHHHHHHHHcCC---cEEEEeCCC-----cchHHHHHcC-CceeeEEecCccccccHHhHHHHHHHHHHHHHHHhcCCHH
Q 006484 243 VNAAYCAACAGI---PVVITSGFA-----MDSIIKVLEG-KRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQ 313 (643)
Q Consensus 243 l~aa~~a~~~gv---~v~I~~g~~-----~~~l~~~~~g-~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~ 313 (643)
+++++...+.|+ |-+| +|.- .-.+.+|.++ +.+|++...+ .+++++++++|++||+.|+++|..
T Consensus 24 ~~~~~~~~~~~~~~~~~~i-~g~~~~~~~~~~~~nP~t~~e~i~~~~~~~------~~dv~~av~~A~~a~~~W~~~~~~ 96 (500)
T TIGR01238 24 LEAQIHAWADKTWQAAPII-GHSYKADGEAQPVTNPADRRDIVGQVFHAN------LAHVQAAIDSAQQAFPTWNATPAK 96 (500)
T ss_pred HHHHHHHHhcCceecCceE-CCEEecCCCeEEeeCCCCCCeEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHH
Confidence 446666666663 3333 3331 1234677775 6788888887 889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhhHHHHHhhcChhHHHHHHHHHHHHhcccccccccccccccCCC
Q 006484 314 DRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADG 393 (643)
Q Consensus 314 ~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 393 (643)
+|.++|++++++|+++.++|+++++.|++++. .++ ..++..+++.++++++..+.. . +
T Consensus 97 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~----~~a--------~~ev~~~i~~l~~~a~~~~~~---~-------~ 154 (500)
T TIGR01238 97 ERAAKLDRLADLLELHMPELMALCVREAGKTI----HNA--------IAEVREAVDFCRYYAKQVRDV---L-------G 154 (500)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCH----HHH--------HHHHHHHHHHHHHHHHHHHHh---c-------C
Confidence 99999999999999999999998887765432 122 246778888888876533210 0 0
Q ss_pred eeEEEEeeeeeeEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecC-c
Q 006484 394 LILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-R 469 (643)
Q Consensus 394 ~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~~AlaaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~-~ 469 (643)
...++|+|||++|+|| +|. +.++++++||++||+||+|||++||.++..+.+++.+ + ||+|++|+|++ +
T Consensus 155 ---~~~~~P~GVV~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~----aGlP~gvv~~v~g~~ 227 (500)
T TIGR01238 155 ---EFSVESRGVFVCISPWNFPLAIFTGQISAALAAGNTVIAKPAEQTSLIAYRAVELMQE----AGFPAGTIQLLPGRG 227 (500)
T ss_pred ---ceeccCcceEEEECCCchHHHHHHHHHHHHHHcCCEEEEeCCCCccHHHHHHHHHHHH----cCCCCCceEEEecCc
Confidence 1358999999999999 585 5679999999999999999999999999999999987 7 99999999995 4
Q ss_pred chHhHhhhCCCCccEEEeecCHHHHHHHHHhcC------CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccc
Q 006484 470 EEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK------IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACN 542 (643)
Q Consensus 470 ~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a~------~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~ 542 (643)
.++++.|..||+||+|+||||+.+|+.|++.++ +|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+
T Consensus 228 ~~~~~~l~~~~~v~~V~ftGs~~~g~~v~~~aa~~~~~~~~v~lElGGknp~IV~~dAdld~Aa~~i~~~~f~nsGQ~C~ 307 (500)
T TIGR01238 228 ADVGAALTSDPRIAGVAFTGSTEVAQLINQTLAQREDAPVPLIAETGGQNAMIVDSTALPEQVVRDVLRSAFDSAGQRCS 307 (500)
T ss_pred chHHHHHhcCCCcCeEEEECCHHHHHHHHHHHhhcccCCceEEEecCCcCcEEECCCCCHHHHHHHHHHHHHhcCCCCCC
Confidence 467777778999999999999999999988662 6999999999999999999999999999999999998 999
Q ss_pred cceeEEEcCccCCchhHHHHHHHHHHcCCE----------------------------------Ee----cCcc--ccc-
Q 006484 543 AMETLLVHKDLACNGALNELVVELQHEGVG----------------------------------LF----GGPR--ASK- 581 (643)
Q Consensus 543 a~~rv~V~~~i~~~~f~~~l~~~~~~~~~~----------------------------------~~----g~~~--~~~- 581 (643)
|++|+|||+++| |+|+++|+++++++++. +. ++.. ..+
T Consensus 308 a~~rv~V~~~i~-d~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~l~~~~~~~~~~~~~g~ 386 (500)
T TIGR01238 308 ALRVLCVQEDVA-DRVLTMIQGAMQELKVGVPHLLTTDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDDSRACQHGT 386 (500)
T ss_pred CCceeEEcHhhH-HHHHHHHHHHHHhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeeccCCCCCCCCCe
Confidence 999999999999 79999999998876421 11 0000 012
Q ss_pred cc-c-C---CCCccccccccCceEEEEEeC--CHHHHHHHHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 582 LL-Q-I---PETRLFHHEYNSMVCTVEIVD--DVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 582 ~~-p-v---~~~~~~~eE~FgPvl~v~~~~--~~deAi~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
++ | | +++.+++||+||||++|++|+ ++||||+++|+++|||++||||+|.+++.+|++++++
T Consensus 387 f~~PTvl~~~~~~~~~eE~FgPvl~v~~~~~~~~deai~~~N~~~~gLs~~vfT~d~~~~~~~~~~l~~ 455 (500)
T TIGR01238 387 FVAPTLFELDDIAELSEEVFGPVLHVVRYKARELDQIVDQINQTGYGLTMGVHSRIETTYRWIEKHARV 455 (500)
T ss_pred eEcCEEEccCCchHhhCCCcCCEEEEEEeCCCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCc
Confidence 22 5 3 357889999999999999998 7999999999999999999999999999999999875
No 97
>cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like. Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway.
Probab=100.00 E-value=4.8e-61 Score=518.62 Aligned_cols=332 Identities=20% Similarity=0.256 Sum_probs=270.5
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhhHHHHHhhcChhHHHHHHH-HH
Q 006484 293 AREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAK-SI 371 (643)
Q Consensus 293 v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~-~~ 371 (643)
+++++++|++||+.|+++|.++|.++|++++++|++|+++|++.++.|++++. .++. ..++...++ .+
T Consensus 1 ~~~av~~A~~A~~~W~~~~~~eR~~~L~~~a~~l~~~~eela~~~~~E~Gk~~----~ea~-------~~e~~~~~~~~~ 69 (436)
T cd07122 1 VDELVERARKAQREFATFSQEQVDKIVEAVAWAAADAAEELAKMAVEETGMGV----VEDK-------VIKNHFASEYVY 69 (436)
T ss_pred ChHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc----HHHH-------HHHHHHHHHHHH
Confidence 46899999999999999999999999999999999999999998877765432 2221 123455555 55
Q ss_pred HHHhcccccccccccccccCCCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHH
Q 006484 372 RILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKV 449 (643)
Q Consensus 372 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~~AlaaGN~vi~Kps~~tp~t~~~~~~l 449 (643)
++++.. +..|.... ..+...+++|+|+|||++|+|| ||. ..++++++||++||+||+|||+.||+|+.+++++
T Consensus 70 ~~~~~~-~~~g~~~~----~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~~~~ 144 (436)
T cd07122 70 NDIKDM-KTVGVIEE----DEEKGIVEIAEPVGVIAALIPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKI 144 (436)
T ss_pred HHHhcC-cceeeecc----CCCCCeEEEeecccEEEEEeCCCCchHHHHHHHHHHHHcCCcEEEECCcchhhHHHHHHHH
Confidence 665542 22232111 1234567889999999999999 586 4578999999999999999999999999999999
Q ss_pred HHHhcccc-cCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHHhcCCCEEEecCccceEEEcCCCCHHHHH
Q 006484 450 ITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAK 527 (643)
Q Consensus 450 ~~~a~~~a-lP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a~~p~~lelGG~~p~iV~~dAdl~~A~ 527 (643)
+++++.++ +|+|++|+|++ +.++++.|..||+||+|+||||+++++..+. ..+|+++|||||||+||++|||+|+|+
T Consensus 145 ~~~~l~eaG~P~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~v~~~a~~-~~~~~~~elgG~~p~iV~~dADl~~A~ 223 (436)
T cd07122 145 MREAAVAAGAPEGLIQWIEEPSIELTQELMKHPDVDLILATGGPGMVKAAYS-SGKPAIGVGPGNVPAYIDETADIKRAV 223 (436)
T ss_pred HHHHHHHcCCCchhEEEecCCChHHHHHHHcCCCcCEEEEcCCHHHHHHHHh-cCCCEEEecCCCCeEEEcCCCCHHHHH
Confidence 99888889 99999999995 5556777778999999999999999887643 379999999999999999999999999
Q ss_pred HHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHc-------CC---------EE----ecCccc------c
Q 006484 528 NIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHE-------GV---------GL----FGGPRA------S 580 (643)
Q Consensus 528 ~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~-------~~---------~~----~g~~~~------~ 580 (643)
+.+++|+|.|+| .|++++|+|||++|| |+|+++|+++...+ .+ .+ .+.... .
T Consensus 224 ~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~~~~~~~~v~~~~~~~~~~~gp~~~~~~~~~~~~~~~ 302 (436)
T cd07122 224 KDIILSKTFDNGTICASEQSVIVDDEIY-DEVRAELKRRGAYFLNEEEKEKLEKALFDDGGTLNPDIVGKSAQKIAELAG 302 (436)
T ss_pred HHHHHHhhccCCCCCCCCCEEEEechhH-HHHHHHHHHhcceecCHHHHHHHHHHhhcCCCCcCccccCcCHHHHHHHcC
Confidence 999999999998 999999999999999 79999998876542 10 00 011000 0
Q ss_pred ccc-c-----------C-CCCccccccccCceEEEEEeCCHHHHHHHHHcc----CCCceeEEEecCHHHHHHHHHhcCC
Q 006484 581 KLL-Q-----------I-PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQH----GSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 581 ~~~-p-----------v-~~~~~~~eE~FgPvl~v~~~~~~deAi~~aN~~----~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
..+ | + ++|+++ +|.||||++|++|+|+||||+++|++ +|||++||||+|.+++++|++++++
T Consensus 303 ~~~~~ga~vl~~~~~~v~~~~~~~-~E~FGPVl~v~~~~~~~eAi~~aN~~~~~~~~GLsa~V~T~d~~~a~~~~~~l~a 381 (436)
T cd07122 303 IEVPEDTKVLVAEETGVGPEEPLS-REKLSPVLAFYRAEDFEEALEKARELLEYGGAGHTAVIHSNDEEVIEEFALRMPV 381 (436)
T ss_pred CCCCCCCeEEEEecCCCCCCCcch-hcccCCeEEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHhhCCc
Confidence 011 1 2 246766 66799999999999999999999998 8999999999999999999999875
No 98
>cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like. Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD.
Probab=100.00 E-value=1e-60 Score=523.58 Aligned_cols=349 Identities=21% Similarity=0.226 Sum_probs=288.3
Q ss_pred HHHcCCceeeEEecCccccccHHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhc
Q 006484 269 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 348 (643)
Q Consensus 269 ~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~g 348 (643)
+|.+|+.++++...+ .+++++++++|+++ |+++|.++|.++|+++++.|++|.++|+++++.|++++.
T Consensus 5 ~P~tg~~i~~~~~~~------~~~v~~av~~A~~~---~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~--- 72 (451)
T cd07146 5 NPYTGEVVGTVPAGT------EEALREALALAASY---RSTLTRYQRSAILNKAAALLEARREEFARLITLESGLCL--- 72 (451)
T ss_pred CCCCCCEEEEEcCCC------HHHHHHHHHHHHHH---HhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCH---
Confidence 466788888887777 88999999998864 888999999999999999999999999999887765432
Q ss_pred hhhHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccc--cCCCeeEEEEeeeeeeEEEEcCCC-ch-hHHHHHHH
Q 006484 349 YAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTE--LADGLILEKTSCPLGVLLIVFESR-PD-ALVQIASL 423 (643)
Q Consensus 349 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g~~~~~~~--~~~~~~~~~~~~PlGvv~~I~p~~-P~-~~~~~~~~ 423 (643)
.++ ..++..+++.++++++.... .++...... ...+...+.+++|+|||++|+||| |. +.+++++|
T Consensus 73 -~~a--------~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~ 143 (451)
T cd07146 73 -KDT--------RYEVGRAADVLRFAAAEALRDDGESFSCDLTANGKARKIFTLREPLGVVLAITPFNHPLNQVAHKIAP 143 (451)
T ss_pred -HHH--------HHHHHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEeccceEEEEccCChHHHHHHHHHHH
Confidence 122 13556666666665543211 122211100 012345677899999999999994 85 56789999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHHhc
Q 006484 424 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 501 (643)
Q Consensus 424 AlaaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a 501 (643)
||++||+||+|||+.+|+++..+.+++.+ + +|+|++|++++ +.++++.|..||++|+|+||||+.+|+.|++.+
T Consensus 144 ALaaGN~VilKps~~~p~~~~~l~~~l~~----aglP~g~v~~v~g~~~~~~~~l~~~~~i~~V~fTGs~~~g~~i~~~a 219 (451)
T cd07146 144 AIAANNRIVLKPSEKTPLSAIYLADLLYE----AGLPPDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAIAATA 219 (451)
T ss_pred HHHcCCEEEEECCCCchHHHHHHHHHHHH----cCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHh
Confidence 99999999999999999999999999987 6 99999999995 456778888899999999999999999998876
Q ss_pred C-CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCCE-------
Q 006484 502 K-IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVG------- 572 (643)
Q Consensus 502 ~-~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~~------- 572 (643)
. +|+++|||||||+||++|||++.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++++.
T Consensus 220 ~~~~~~lElGG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~~g~p~~~~~ 298 (451)
T cd07146 220 GYKRQLLELGGNDPLIVMDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVA-DEFVDLLVEKSAALVVGDPMDPAT 298 (451)
T ss_pred cCCceeeecCCCceEEECCCCCHHHHHHHHHHHHHhhCCCCCCCCceEEEchHHH-HHHHHHHHHHHhcCCCCCCCCCCC
Confidence 4 8999999999999999999999999999999999988 999999999999999 79999999998876421
Q ss_pred ---------------------------E-ecCccccccc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHHc
Q 006484 573 ---------------------------L-FGGPRASKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQ 617 (643)
Q Consensus 573 ---------------------------~-~g~~~~~~~~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~deAi~~aN~ 617 (643)
+ .|+.....++ | | ++|.+++||+||||++|++|+|+||||+++|+
T Consensus 299 ~~gpli~~~~~~~v~~~v~~a~~~Ga~vl~gg~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~ 378 (451)
T cd07146 299 DMGTVIDEEAAIQIENRVEEAIAQGARVLLGNQRQGALYAPTVLDHVPPDAELVTEETFGPVAPVIRVKDLDEAIAISNS 378 (451)
T ss_pred CcCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCEEEcCEEeecCCCCCHHHhCCCCCCeEEEEEeCCHHHHHHHHhC
Confidence 1 1221111122 5 2 35789999999999999999999999999999
Q ss_pred cCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 618 HGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 618 ~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
++|||++||||+|.+++++|++++++
T Consensus 379 ~~~gL~~~i~t~d~~~~~~~~~~l~~ 404 (451)
T cd07146 379 TAYGLSSGVCTNDLDTIKRLVERLDV 404 (451)
T ss_pred CCCCceEEEECCCHHHHHHHHHHCCc
Confidence 99999999999999999999999874
No 99
>PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1.2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A ....
Probab=100.00 E-value=2.8e-61 Score=531.02 Aligned_cols=349 Identities=22% Similarity=0.289 Sum_probs=294.2
Q ss_pred HHHcCCceeeEEecCccccccHHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhc
Q 006484 269 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 348 (643)
Q Consensus 269 ~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~g 348 (643)
+|.+|+.++++...+ .+++++++++|++||+.|++++..+|.++|++++++|++|.++|++++..|++++.
T Consensus 13 ~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~--- 83 (462)
T PF00171_consen 13 NPATGEVIGEVPSAT------AEDVDRAVEAARAAFKEWSKLPAAERARILERFADLLEERRDELAELIALETGKPI--- 83 (462)
T ss_dssp ETTTECEEEEEEEBS------HHHHHHHHHHHHHHHHHHTTSSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTSSH---
T ss_pred CCCCcCEEEEEcCCC------HHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHhhccccccccccccccccc---
Confidence 356788899988887 89999999999999999999999999999999999999999999999887765432
Q ss_pred hhhHHHHHhhcChhHHHHHHHHHHHHhcccccc-cccccccccCCCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHHHHHH
Q 006484 349 YAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAI 425 (643)
Q Consensus 349 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~~Al 425 (643)
.++ ..++..+++.++++++..+.. ++..+. +.+...++.++|+|||++|+|| +|. +.++++++||
T Consensus 84 -~~a--------~~ev~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~AL 151 (462)
T PF00171_consen 84 -AEA--------RGEVDRAIDFLRYYADAARKLAGEVLPS---DPGSRNYTRREPLGVVLIITPWNFPLYLAVWKIAPAL 151 (462)
T ss_dssp -HHH--------HHHHHHHHHHHHHHHHHHHHHTEEEEEE---STTEEEEEEEEE-SEEEEEE-SSSCTHHHHHHHHHHH
T ss_pred -ccc--------cchhhhhhhhhhhhhhcccceehhhccc---ccccccccccccccceeecccccccccccccchhhhh
Confidence 222 225666667777766544322 322221 2567788899999999999998 585 5679999999
Q ss_pred HhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHHhcC-
Q 006484 426 RSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK- 502 (643)
Q Consensus 426 aaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a~- 502 (643)
++||+||+|||+.+|.++.++++++++ + +|+|++|++++ +.+++..|..||++++|+||||+.+|++|++.+.
T Consensus 152 aaGN~VVlkps~~~~~~~~~l~~~~~~----AglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a~~ 227 (462)
T PF00171_consen 152 AAGNTVVLKPSEQAPLTALLLAELLEE----AGLPPGVVNVVPGDGSEVGEALVSHPDVDLVSFTGSTATGRAIAKAAAK 227 (462)
T ss_dssp HTT-EEEEEEBTTSHHHHHHHHHHHHH----HTSTTTSEEEECSSTHHHHHHHHHTTTEEEEEEESEHHHHHHHHHHHHT
T ss_pred cccccceeeeccccccccccchhhccc----cccccccccccccccccccceeeeccccceeeecchhhhhhhhhhhccc
Confidence 999999999999999999999999998 6 99999999996 6677888888999999999999999999988773
Q ss_pred --CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC--------
Q 006484 503 --IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 571 (643)
Q Consensus 503 --~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~-------- 571 (643)
+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|++++|+|||+++| |+|+++|+++++++.+
T Consensus 228 ~~~~v~lelgG~~p~iV~~daDld~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~-~~f~~~l~~~~~~l~~g~~~~~~~ 306 (462)
T PF00171_consen 228 NLKPVVLELGGKNPVIVDPDADLDKAAEAIVRGAFFNSGQSCTAPSRVLVHESIY-DEFVEALKERVAKLRVGDPLDEST 306 (462)
T ss_dssp TTSEEEEEECEEEEEEE-TTSHHHHHHHHHHHHHHGGGGTSTTSEEEEEEEHHHH-HHHHHHHHHHHHTSEBSSTTSTTC
T ss_pred ccccccccccccceeeEecccccccccccccchhccccccccccccccccccccc-chhhhhhhhccccccccCCccccc
Confidence 9999999999999999999999999999999999998 999999999999999 7999999999987521
Q ss_pred --------------------------EE-ecCc-----cccccc--c-C-----CCCccccccccCceEEEEEeCCHHHH
Q 006484 572 --------------------------GL-FGGP-----RASKLL--Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAA 611 (643)
Q Consensus 572 --------------------------~~-~g~~-----~~~~~~--p-v-----~~~~~~~eE~FgPvl~v~~~~~~deA 611 (643)
++ +|+. ...+++ | | ++|++++||+||||++|++|+|+|||
T Consensus 307 ~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ea 386 (462)
T PF00171_consen 307 DVGPLISKAQRERVKALIEDAVAEGAKVLCGGEPQEADPENGFFIPPTVLEDVPPDMPIMQEEIFGPVLPVVPYDDLDEA 386 (462)
T ss_dssp SBCHCSSHHHHHHHHHHHHHHHHTTSEEEEETSSSSBCSSSSTEEEEEEEESEHTTSHHHHSC-SSSEEEEEEESSHHHH
T ss_pred cccccccchhhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccceecccccchhh
Confidence 22 3441 112222 5 2 46899999999999999999999999
Q ss_pred HHHHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 612 IDHIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 612 i~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
|+++|+++|||+++|||+|.++++++++++++
T Consensus 387 i~~~n~~~~gl~a~v~s~d~~~~~~~~~~l~~ 418 (462)
T PF00171_consen 387 IALANDSEYGLTASVFSRDESRAERLARRLEA 418 (462)
T ss_dssp HHHHHHSSEESEEEEECSBHHHHHHHHHHSTS
T ss_pred hhcccccCCCceeEEecccccccccccccccc
Confidence 99999999999999999999999999999874
No 100
>cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like. Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD.
Probab=100.00 E-value=1.3e-60 Score=519.70 Aligned_cols=333 Identities=17% Similarity=0.153 Sum_probs=270.5
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhhHHHHHhhcChhHHHHHHHHHHHH
Q 006484 295 EMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRIL 374 (643)
Q Consensus 295 ~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~~ 374 (643)
+.+++|++||+.|+++|+.+|.++|++++++|++|.++|++++++|+++. + ..++.. .++...++.++++
T Consensus 2 ~~~~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~-~--~~ea~~-------~ev~~~i~~~~~~ 71 (434)
T cd07133 2 ALLERQKAAFLANPPPSLEERRDRLDRLKALLLDNQDALAEAISADFGHR-S--RHETLL-------AEILPSIAGIKHA 71 (434)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-C--hHHHHH-------HHHHHHHHHHHHH
Confidence 35778999999999999999999999999999999999999998887641 1 112211 1333444444444
Q ss_pred hcccc-cccccc-cccccCCCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHH
Q 006484 375 ADMEE-PIGQIL-KRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVI 450 (643)
Q Consensus 375 ~~~~~-~~g~~~-~~~~~~~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~~AlaaGN~vi~Kps~~tp~t~~~~~~l~ 450 (643)
++... ..+... .......+...+++++|+|||++|+|| +|. +++++++|||++||+||+|||+.+|.|+.++++++
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~l~ 151 (434)
T cd07133 72 RKHLKKWMKPSRRHVGLLFLPAKAEVEYQPLGVVGIIVPWNYPLYLALGPLIAALAAGNRVMIKPSEFTPRTSALLAELL 151 (434)
T ss_pred HHHHHHHhCCcccCCccccCCCceEEEEecccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHH
Confidence 32211 011110 000000123457889999999999998 585 67899999999999999999999999999999999
Q ss_pred HHhcccccCcCceEeecCcchHhHhhhCCCCccEEEeecCHHHHHHHHHhc---CCCEEEecCccceEEEcCCCCHHHHH
Q 006484 451 TSAIPDTVGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---KIPVLGHADGICHVYVDKSANLDVAK 527 (643)
Q Consensus 451 ~~a~~~alP~g~v~~v~~~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a---~~p~~lelGG~~p~iV~~dAdl~~A~ 527 (643)
.+ ++|+|++|+|+++.++++.|.+|+ +|+|+||||+.+|+.|++.+ .+|+++|||||||+||++|||++.|+
T Consensus 152 ~~----alP~g~~~~v~g~~~~~~~l~~~~-v~~V~ftGs~~~g~~v~~~aa~~~~~~~lElgGk~~~iV~~dadl~~aa 226 (434)
T cd07133 152 AE----YFDEDEVAVVTGGADVAAAFSSLP-FDHLLFTGSTAVGRHVMRAAAENLTPVTLELGGKSPAIIAPDADLAKAA 226 (434)
T ss_pred HH----hCCcCeEEEEeCChHHHHHHHhCC-CCEEEEeCchHHHHHHHHHHHhcCceEEEEccCCCcEEEeCCCCHHHHH
Confidence 87 499999999997555677777776 99999999999999999876 38999999999999999999999999
Q ss_pred HHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcC--------------------------------CEE-
Q 006484 528 NIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEG--------------------------------VGL- 573 (643)
Q Consensus 528 ~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~--------------------------------~~~- 573 (643)
+.+++++|.|+| .|+|++|+|||+++| |+|+++|+++++++. .++
T Consensus 227 ~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~~~~g~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~ 305 (434)
T cd07133 227 ERIAFGKLLNAGQTCVAPDYVLVPEDKL-EEFVAAAKAAVAKMYPTLADNPDYTSIINERHYARLQGLLEDARAKGARVI 305 (434)
T ss_pred HHHHHHHhccCCCcccCCCEEEEcHHHH-HHHHHHHHHHHHHhcCCCCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEE
Confidence 999999999988 999999999999999 799999999887642 122
Q ss_pred ecCccc----cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEecCHHHHHHHHHhc
Q 006484 574 FGGPRA----SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQV 641 (643)
Q Consensus 574 ~g~~~~----~~-~~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~~~~~~~~l 641 (643)
.|++.. .+ ++ | | +++++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++
T Consensus 306 ~gg~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l 385 (434)
T cd07133 306 ELNPAGEDFAATRKLPPTLVLNVTDDMRVMQEEIFGPILPILTYDSLDEAIDYINARPRPLALYYFGEDKAEQDRVLRRT 385 (434)
T ss_pred ecCCCCcCCCCCcEEeeEEEeCCCCCCcccccccCCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhC
Confidence 233321 12 33 5 2 35889999999999999999999999999999999999999999999999999998
Q ss_pred CC
Q 006484 642 DR 643 (643)
Q Consensus 642 ~~ 643 (643)
++
T Consensus 386 ~~ 387 (434)
T cd07133 386 HS 387 (434)
T ss_pred Cc
Confidence 74
No 101
>cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like. Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD.
Probab=100.00 E-value=9e-61 Score=526.31 Aligned_cols=350 Identities=21% Similarity=0.225 Sum_probs=294.7
Q ss_pred HHHcCCceeeEEecCccccccHHhHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Q 006484 269 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSR--RLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 346 (643)
Q Consensus 269 ~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~ 346 (643)
+|.+|+.++++...+ .+++++++++|++||+ .|+++|.++|.++|++++++|.+++++|++++.+|.+++.
T Consensus 3 ~P~tg~~i~~~~~~~------~~~v~~av~~a~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~- 75 (457)
T cd07114 3 NPATGEPWARVPEAS------AADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANAEELAELETRDNGKLI- 75 (457)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCH-
Confidence 456888899988887 8899999999999997 4999999999999999999999999999998766654331
Q ss_pred hchhhHHHHHhhcChhHHHHHHHHHHHHhcccccc-cccccccccCCCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHHHH
Q 006484 347 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 423 (643)
Q Consensus 347 ~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~~ 423 (643)
.++ ..+++.+++.+++++...+.. +...+. ...+...+..++|+|||++|+|| ||. +.++++++
T Consensus 76 ---~~~--------~~ev~~~~~~~~~~a~~~~~~~~~~~~~--~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ 142 (457)
T cd07114 76 ---RET--------RAQVRYLAEWYRYYAGLADKIEGAVIPV--DKGDYLNFTRREPLGVVAAITPWNSPLLLLAKKLAP 142 (457)
T ss_pred ---HHH--------HHHHHHHHHHHHHHHHHHHHhcCccccc--CCCCceEEEEEecceEEEEECCCccHHHHHHHHHHH
Confidence 111 235677777777765443322 221111 11344567889999999999998 485 56799999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHHhc
Q 006484 424 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 501 (643)
Q Consensus 424 AlaaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a 501 (643)
||++||+||+|||+.+|.++.++++++.+ + +|+|+||+|++ +.+.++.|..|+++++|+||||+.+|+++++.+
T Consensus 143 AL~aGN~Vilkps~~~p~~~~~l~~~l~~----aglP~~vv~~v~g~~~~~~~~l~~~~~i~~V~ftGs~~~g~~v~~~a 218 (457)
T cd07114 143 ALAAGNTVVLKPSEHTPASTLELAKLAEE----AGFPPGVVNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAA 218 (457)
T ss_pred HHhcCCeEEeECCccchHHHHHHHHHHHH----cCcCCCcEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHH
Confidence 99999999999999999999999999987 7 99999999995 555777787899999999999999999999877
Q ss_pred ---CCCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcC-------
Q 006484 502 ---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEG------- 570 (643)
Q Consensus 502 ---~~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~------- 570 (643)
.+|+++|||||||+||++|||++.|++.+++|+|.|+| +|+|++|+|||+++| |+|+++|+++++++.
T Consensus 219 a~~~~~~~lelgG~~~~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~-~~f~~~l~~~~~~~~~g~p~~~ 297 (457)
T cd07114 219 AENLAPVTLELGGKSPNIVFDDADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIY-DEFVERLVARARAIRVGDPLDP 297 (457)
T ss_pred HhcCCeEEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHH-HHHHHHHHHHHHhCCCCCCCCC
Confidence 38999999999999999999999999999999999988 999999999999999 799999999987652
Q ss_pred ---------------------------CEE-ecCccc------cc-cc-c-C-----CCCccccccccCceEEEEEeCCH
Q 006484 571 ---------------------------VGL-FGGPRA------SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDV 608 (643)
Q Consensus 571 ---------------------------~~~-~g~~~~------~~-~~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~ 608 (643)
.++ +|+... .+ ++ | | +++.+++||+||||++|++|+|+
T Consensus 298 ~~~~gpli~~~~~~~~~~~i~~a~~~ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 377 (457)
T cd07114 298 ETQMGPLATERQLEKVERYVARAREEGARVLTGGERPSGADLGAGYFFEPTILADVTNDMRIAQEEVFGPVLSVIPFDDE 377 (457)
T ss_pred CCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCCEECCEEEeCCCCCChhhhcCCcCceEEEeccCCH
Confidence 222 344321 12 33 5 2 35789999999999999999999
Q ss_pred HHHHHHHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 609 RAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 609 deAi~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
||||+++|+++|||++||||+|.+.+++|++++++
T Consensus 378 deai~~~n~~~~gL~~~ift~d~~~~~~~~~~l~~ 412 (457)
T cd07114 378 EEAIALANDSEYGLAAGIWTRDLARAHRVARAIEA 412 (457)
T ss_pred HHHHHHhhCCCcCceeEEECCCHHHHHHHHHhcCc
Confidence 99999999999999999999999999999999874
No 102
>cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins. NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes.
Probab=100.00 E-value=1.5e-60 Score=520.12 Aligned_cols=333 Identities=20% Similarity=0.220 Sum_probs=275.8
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhhHHHHHhhcChhHHHHHHHHHHHH
Q 006484 295 EMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRIL 374 (643)
Q Consensus 295 ~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~~ 374 (643)
+++++|++||+.|+++|..+|.++|++++++|++|.++|++++++|++++. .++...++.....+++++++.++++
T Consensus 2 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~a~~~ev~~~~~~~~~~~~~~~~~ 77 (443)
T cd07132 2 EAVRRAREAFSSGKTRPLEFRIQQLEALLRMLEENEDEIVEALAKDLRKPK----FEAVLSEILLVKNEIKYAISNLPEW 77 (443)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCH----HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 578999999999999999999999999999999999999999998876643 2332234444456677777777666
Q ss_pred hcccccccccccccccCCCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHH
Q 006484 375 ADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITS 452 (643)
Q Consensus 375 ~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~~AlaaGN~vi~Kps~~tp~t~~~~~~l~~~ 452 (643)
..... ...... ..+...++.++|+|||++|+|| +|. +.++++++||++||+||+|||+.+|.|+..+++++.+
T Consensus 78 ~~~~~-~~~~~~----~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~ 152 (443)
T cd07132 78 MKPEP-VKKNLA----TLLDDVYIYKEPLGVVLIIGAWNYPLQLTLVPLVGAIAAGNCVVIKPSEVSPATAKLLAELIPK 152 (443)
T ss_pred hCCcc-CCCccc----cCCCceEEEEecccEEEEEcCCchhHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHH
Confidence 43111 111000 1122357789999999999998 585 6789999999999999999999999999999999986
Q ss_pred hcccccCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHHhc---CCCEEEecCccceEEEcCCCCHHHHHH
Q 006484 453 AIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---KIPVLGHADGICHVYVDKSANLDVAKN 528 (643)
Q Consensus 453 a~~~alP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a---~~p~~lelGG~~p~iV~~dAdl~~A~~ 528 (643)
++|+|++|++++ ++....++ + ++||+|+||||+++|+.|++.+ .+|+++|||||||+||++|||+|.|++
T Consensus 153 ----~lp~gv~~vv~g~~~~~~~l~-~-~~vd~V~fTGs~~~g~~i~~~a~~~~~~~~lElgG~~p~iV~~dADl~~aa~ 226 (443)
T cd07132 153 ----YLDKECYPVVLGGVEETTELL-K-QRFDYIFYTGSTSVGKIVMQAAAKHLTPVTLELGGKSPCYVDKSCDIDVAAR 226 (443)
T ss_pred ----hCCcCeEEEEeCCHHHHHHHH-h-CCCCEEEEECChHHHHHHHHHHHhhCCceEEEcCCCCceEEcCCCCHHHHHH
Confidence 499999999995 44455555 4 4799999999999999998876 399999999999999999999999999
Q ss_pred HHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC----------------------------E-EecCcc
Q 006484 529 IVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV----------------------------G-LFGGPR 578 (643)
Q Consensus 529 ~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~----------------------------~-~~g~~~ 578 (643)
.+++|+|.|+| +|+|++|+|||+++| |+|+++|++.++++.. + ++|++.
T Consensus 227 ~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~v~~~i~~a~~~~gg~~ 305 (443)
T cd07132 227 RIAWGKFINAGQTCIAPDYVLCTPEVQ-EKFVEALKKTLKEFYGEDPKESPDYGRIINDRHFQRLKKLLSGGKVAIGGQT 305 (443)
T ss_pred HHHHHHHhcCCCceeCCcEEEEcHHHH-HHHHHHHHHHHHHhcCCCCCcccccCCcCCHHHHHHHHHHHhCCEEEeCCcc
Confidence 99999999998 999999999999999 7999999998876521 0 123322
Q ss_pred c-cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 579 A-SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 579 ~-~~-~~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
. .+ ++ | | ++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.+|++++++
T Consensus 306 ~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~an~~~~gL~a~i~t~d~~~~~~~~~~l~~ 379 (443)
T cd07132 306 DEKERYIAPTVLTDVKPSDPVMQEEIFGPILPIVTVNNLDEAIEFINSREKPLALYVFSNNKKVINKILSNTSS 379 (443)
T ss_pred CCCCCEEeeEEEeCCCCCChHHhccccCceeEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCc
Confidence 1 12 33 5 2 3588999999999999999999999999999999999999999999999999999875
No 103
>TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species.
Probab=100.00 E-value=1e-60 Score=540.92 Aligned_cols=347 Identities=17% Similarity=0.192 Sum_probs=284.7
Q ss_pred HHHHcCCceeeEEecCccccccHHhHHHHHHHHHHH-HHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Q 006484 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARES-SRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 346 (643)
Q Consensus 268 ~~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a-~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~ 346 (643)
.+|.+|+.++++...+ . ++++|+++|++| |+.|+++|..+|.++|++++++|++|+++|++ ++.|+|++.
T Consensus 20 ~nP~tg~~i~~~~~~~------~-dv~~Av~~A~~aa~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela~-~~~e~GK~~- 90 (663)
T TIGR02278 20 RDASTGEVLARVTSEG------L-DVAAAVAWAREVGGPALRALTFHERARMLKALAQYLSERKEALYA-LAATTGATR- 90 (663)
T ss_pred cCCCCCCEEEEEcCCc------H-HHHHHHHHHHHhcchhhhcCCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHcCCCH-
Confidence 4567788888866554 3 899999999996 99999999999999999999999999999998 465544321
Q ss_pred hchhhHHHHHhhcChhHHHHHHHHHHHHhccccc---------ccccccccccCCCeeEEEEeeee-eeEEEEcCCC-ch
Q 006484 347 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP---------IGQILKRTELADGLILEKTSCPL-GVLLIVFESR-PD 415 (643)
Q Consensus 347 ~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~---------~g~~~~~~~~~~~~~~~~~~~Pl-Gvv~~I~p~~-P~ 415 (643)
.++ ..+++.+++.++++++..+. .|...+.. .+.+...+++|+|+ |||++|+||| |.
T Consensus 91 ---~~a--------~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~P~~Gvv~~I~pwN~P~ 158 (663)
T TIGR02278 91 ---RDN--------WVDIDGGIGTLFTYSSLGRRELPDANLIPEDEFEPLS-KDGSFQGRHILTPKGGVAVQINAFNFPV 158 (663)
T ss_pred ---HHH--------HHHHHHHHHHHHHHHHhhhhhccccccccCCceeccC-CCCccceEEEEEeCCceEEEEcCCchHH
Confidence 222 23677777888877654332 12222210 11123457889998 9999999995 85
Q ss_pred -hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecCcchHhHhhhCCCCccEEEeecCHHH
Q 006484 416 -ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKL 493 (643)
Q Consensus 416 -~~~~~~~~AlaaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~~~~~~~~l~~~~~v~~i~fTGs~~~ 493 (643)
++.++++|||++||+||+|||+.||+++.++++++.++ . ||+|++|+|++. .+.++.+++.+|+|+||||+++
T Consensus 159 ~~~~~~~~~ALaaGN~Vv~KPs~~tp~~~~~l~~~~~~a---G~lP~gv~~~v~g~--~~~~~~~~~~~~~V~FTGS~~~ 233 (663)
T TIGR02278 159 WGLLEKFAPAFLAGVPTLAKPATPTAYVAEALVRTMVES---GLLPEGSLQLICGS--AGDLLDHLDHRDVVAFTGSAAT 233 (663)
T ss_pred HHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHh---CCCCCCcEEEEeCC--hHHHHhcCCCCCEEEEECCHHH
Confidence 56799999999999999999999999999999999884 4 899999999963 2334544467999999999999
Q ss_pred HHHHHHhc-----CCCEEEecCccceEEEcCCCC-----HHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHH
Q 006484 494 VSQIKEST-----KIPVLGHADGICHVYVDKSAN-----LDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNEL 562 (643)
Q Consensus 494 g~~i~~~a-----~~p~~lelGG~~p~iV~~dAd-----l~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l 562 (643)
|++|++.+ .+|+++|||||||+||++||| +|.|++.+++|+|.|+| .|+|++|+|||+++| |+|+++|
T Consensus 234 G~~i~~~aaaa~~~~~~~lELGGk~p~IV~~dAd~~~~dl~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~-d~f~~~l 312 (663)
T TIGR02278 234 ADRLRAHPNVLERGIRFNAEADSLNAAILGEDATPDEPEFDLFAQEIVRELTIKAGQKCTAIRRVIVPKALL-EAVLKAL 312 (663)
T ss_pred HHHHHHhHhHHhcCceEEEEcCCCCeEEEcCCCCccchhHHHHHHHHHHHHHhcCCCCccCCceEEEeHHHH-HHHHHHH
Confidence 99999853 389999999999999999999 99999999999999998 999999999999999 7999999
Q ss_pred HHHHHHcCC----------------------------------EE-ecCccc-cc-cc-c-C-----CCC-ccccccccC
Q 006484 563 VVELQHEGV----------------------------------GL-FGGPRA-SK-LL-Q-I-----PET-RLFHHEYNS 597 (643)
Q Consensus 563 ~~~~~~~~~----------------------------------~~-~g~~~~-~~-~~-p-v-----~~~-~~~~eE~Fg 597 (643)
+++++++.+ ++ +|+... .+ ++ | | ++| .+++||+||
T Consensus 313 ~~~~~~l~vG~p~~~~t~~Gpli~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~g~~~~PTvl~~~~~~~~~i~~eE~FG 392 (663)
T TIGR02278 313 QARLAKVVLGDPREEGVDMGPLVSLEQRADVEAAVAALLAAGAEVRLGGPGRLDGAFFPPTLLLAEDPWAGAVHATEAFG 392 (663)
T ss_pred HHHHHhccCCCccccCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCeeEccEEEeeCCcchhhHHhccccC
Confidence 999987632 11 244321 13 33 5 2 234 689999999
Q ss_pred ceEEEEEeCCHHHHHHHHHccCCCceeEEEecCHHHHHHHHHhc
Q 006484 598 MVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQV 641 (643)
Q Consensus 598 Pvl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~~~~~~~~l 641 (643)
||++|++|+|+||||+++|+++|||++||||+|.+++++++++|
T Consensus 393 PVl~V~~~~~~~eai~~aN~~~~gL~a~vft~d~~~~~~~~~~l 436 (663)
T TIGR02278 393 PVATFFPYGDRAEAARLAARGGGSLVATLATSDPEEARQFILGL 436 (663)
T ss_pred CeEEEEeeCCHHHHHHHHHcCCCCceEEEEeCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999988
No 104
>TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating).
Probab=100.00 E-value=2.4e-60 Score=521.38 Aligned_cols=334 Identities=17% Similarity=0.223 Sum_probs=270.8
Q ss_pred HHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhhHHHHHhhcChhHHHHHHH
Q 006484 290 QVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAK 369 (643)
Q Consensus 290 ~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~ 369 (643)
.+++++++++|++||+.|+++|.++|.++|++++++|++|+++|++...+|.+++. .. +++. +......
T Consensus 7 ~~~v~~av~~A~~A~~~w~~~s~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~------~~-~~~~----~~~~~~~ 75 (488)
T TIGR02518 7 IQQVRNLIRSAKVAQKKLANMTQEQIDKIVKAIVDAAYENAVKLAKMANEETGFGK------WE-DKVI----KNVFAAT 75 (488)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCCh------HH-HHHH----HHHHHHH
Confidence 67899999999999999999999999999999999999999999997776654332 11 1111 1112233
Q ss_pred HHHHHhcccccccccccccccCCCeeEEEEeeeeeeEEEEcCC-Cchh-HHHHHHHHHHhCCEEEEeCCcchHHHHHHHH
Q 006484 370 SIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPDA-LVQIASLAIRSGNGLLLKGGKEAMRSNAILH 447 (643)
Q Consensus 370 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~-~P~~-~~~~~~~AlaaGN~vi~Kps~~tp~t~~~~~ 447 (643)
.+.+++...+..|. +. .+.+...+.+++|+|||++|+|| ||+. ..+++++||++||+||+|||+.||.|+..++
T Consensus 76 ~~~~~~~~~~~~G~-~~---~~~~~~~~~~~~PlGVV~~I~P~n~P~~~~~~k~~~AL~aGNaVIlKps~~a~~s~~~~~ 151 (488)
T TIGR02518 76 IVYDSIKDMKTIGI-LS---EDKEKKVIEIAVPVGVVAGLIPSTNPTSTAIYKTLISIKARNAIVFSPHPNAKKCIIETV 151 (488)
T ss_pred HHHHHHhhCcccce-ec---CCCCcceEEEEecceEEEEEcccCChHHHHHHHHHHHHHcCCcEEEECCccchHHHHHHH
Confidence 33333322223342 11 12345567889999999999998 5965 5688999999999999999999999999999
Q ss_pred HHHHHhcccc-cCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHHhcCCCEEEecCccceEEEcCCCCHHH
Q 006484 448 KVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDV 525 (643)
Q Consensus 448 ~l~~~a~~~a-lP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a~~p~~lelGG~~p~iV~~dAdl~~ 525 (643)
+++++++.++ +|+|++|+|++ +.+.++.|..||+||+|+||||+.+++.+ ..+.+|+++|||||||+||++|||+|+
T Consensus 152 ~~l~~~l~eaGlP~gvv~~v~g~~~e~~~~L~~~~~vd~V~fTGs~~v~~~a-~~~~~pv~~e~gGn~p~iV~~dADld~ 230 (488)
T TIGR02518 152 KLMRKAAEEAGAPEGAIGCITVPTIEGTNELMKNKDTSLILATGGEAMVKAA-YSSGTPAIGVGPGNGPAYIERTANVKK 230 (488)
T ss_pred HHHHHHHHHcCcCcccEEEEcCCCHHHHHHHHhCCCcCEEEEeCCHHHHHHH-HHcCCCEEEEcCCCCeEEEeCCCCHHH
Confidence 9999999889 99999999984 44556656678899999999999999888 456899999999999999999999999
Q ss_pred HHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHH-------HHHcCCEEecCc----------ccc-------
Q 006484 526 AKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVE-------LQHEGVGLFGGP----------RAS------- 580 (643)
Q Consensus 526 A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~-------~~~~~~~~~g~~----------~~~------- 580 (643)
|++.+++|+|+|+| +|+|.+|+|||++|| |+|+++|+++ .+++.+ |++ ...
T Consensus 231 Aa~~iv~sk~~~~Gq~C~a~~rllV~~~i~-d~f~~~L~~~g~~~~~~~~~~~v---g~~~~~~~~~~gp~i~~~~~~~i 306 (488)
T TIGR02518 231 AVRDIIDSKTFDNGTICASEQSIIVEECNK-DAVVEELKKQGGYFLTAEEAEKL---GKFILRPNGTMNPQIVGKSPQVI 306 (488)
T ss_pred HHHHHHHHHhcCCCCCCCCCCEEEEeHHHH-HHHHHHHHHhhhhhcCHHHHHhh---cccccCCCCCcCcccccchHHHH
Confidence 99999999999887 999999999999999 7999999887 555432 221 000
Q ss_pred -ccc----c------------CCCCccccccccCceEEEEEeCCHHHHHHHHHc----cCCCceeEEEecCHHHHHHHHH
Q 006484 581 -KLL----Q------------IPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQ----HGSAHTDCIVAEDQKVAETFLC 639 (643)
Q Consensus 581 -~~~----p------------v~~~~~~~eE~FgPvl~v~~~~~~deAi~~aN~----~~~GL~a~v~t~d~~~~~~~~~ 639 (643)
.++ + +.....++||+||||++|++|+|+||||+++|+ ++|||+++|||+|.+++++|++
T Consensus 307 ~~~i~~av~~gakll~gg~~~v~~~~~~~~E~fgPVl~v~~~~~~dEAI~~an~~i~~~~~Glta~I~T~d~~~a~~f~~ 386 (488)
T TIGR02518 307 ANLAGLTVPEDAKVLIGEQNGVGNKNPYSREKLTTILAFYTEENWHEACELSIELLQNEGAGHTLIIHSENKDIVREFAL 386 (488)
T ss_pred HHHhccccCCCCEEEEeCCCCCCCCCccccCccCceEEEEEeCCHHHHHHHHHHhhhcCCCCCeEEEEeCCHHHHHHHHH
Confidence 000 1 112223589999999999999999999999998 7999999999999999999999
Q ss_pred hcCC
Q 006484 640 QVDR 643 (643)
Q Consensus 640 ~l~~ 643 (643)
++++
T Consensus 387 ~i~a 390 (488)
T TIGR02518 387 KKPV 390 (488)
T ss_pred hCCe
Confidence 9875
No 105
>cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase. The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH.
Probab=100.00 E-value=1.7e-60 Score=524.94 Aligned_cols=347 Identities=18% Similarity=0.211 Sum_probs=279.8
Q ss_pred HHHHcCCceeeEEecCccccccHHhHHHHHHHHHHH-HHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Q 006484 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARES-SRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 346 (643)
Q Consensus 268 ~~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a-~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~ 346 (643)
.+|.+|+.++++.. . .+++++|+++|++| |+.|+++|.++|.++|++++++|++|+++|+++ +.|++++
T Consensus 20 ~nP~tg~~~~~~~~-~------~~dv~~Av~~A~~A~~~~W~~~~~~~Ra~~L~~~a~~l~~~~~~la~l-~~e~Gkp-- 89 (513)
T cd07128 20 HDAVTGEVVARVSS-E------GLDFAAAVAYAREKGGPALRALTFHERAAMLKALAKYLMERKEDLYAL-SAATGAT-- 89 (513)
T ss_pred ECCCCCCEEEEEcC-C------HHHHHHHHHHHHHhhhchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCC--
Confidence 34667888888754 3 46899999999998 799999999999999999999999999999985 6655433
Q ss_pred hchhhHHHHHhhcChhHHHHHHHHHHHHhcccccc---------cccccccccCCCeeEEEEeee-eeeEEEEcCCC-ch
Q 006484 347 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI---------GQILKRTELADGLILEKTSCP-LGVLLIVFESR-PD 415 (643)
Q Consensus 347 ~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~P-lGvv~~I~p~~-P~ 415 (643)
+.++. .++..+++.++++++..+.. |+..+. ..+.....+++++| +|||++|+||| |.
T Consensus 90 --~~ea~--------~Ev~~~~~~~~~~a~~a~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~~GVv~~I~pwN~P~ 158 (513)
T cd07128 90 --RRDSW--------IDIDGGIGTLFAYASLGRRELPNAHFLVEGDVEPL-SKDGTFVGQHILTPRRGVAVHINAFNFPV 158 (513)
T ss_pred --HHHHH--------HHHHHHHHHHHHHHHHHHhhccccccccCCccccc-CCCccccceEEEEecccEEEEECCcccHH
Confidence 22221 25566666666665433211 111111 00111124567999 59999999994 85
Q ss_pred -hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecC-cchHhHhhhCCCCccEEEeecCHH
Q 006484 416 -ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNK 492 (643)
Q Consensus 416 -~~~~~~~~AlaaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~ 492 (643)
+++++++|||++||+||+|||+.||+++.++++++.++ . ||+|++|+|++ +..+.+.+ +.+|+|+||||+.
T Consensus 159 ~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~ea---G~lP~gv~~~v~g~~~~~~~~l---~~~d~v~fTGS~~ 232 (513)
T cd07128 159 WGMLEKFAPALLAGVPVIVKPATATAYLTEAVVKDIVES---GLLPEGALQLICGSVGDLLDHL---GEQDVVAFTGSAA 232 (513)
T ss_pred HHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHh---CCCCCCcEEEecCChHHHhccc---CCCCEEEEECCHH
Confidence 56799999999999999999999999999999999883 3 79999999995 33333332 4689999999999
Q ss_pred HHHHHHHhc-----CCCEEEecCccceEEEcCCCC-----HHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHH
Q 006484 493 LVSQIKEST-----KIPVLGHADGICHVYVDKSAN-----LDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNE 561 (643)
Q Consensus 493 ~g~~i~~~a-----~~p~~lelGG~~p~iV~~dAd-----l~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~ 561 (643)
+|++|++.+ .+|+++|||||||+||++||| +|.|++.+++++|.|+| +|++++|+|||+++| |+|+++
T Consensus 233 ~G~~i~~~a~~a~~~~~~~lElGGknp~IV~~DAd~~~~dld~aa~~iv~~~f~~aGQ~C~a~~rv~V~~~i~-d~f~~~ 311 (513)
T cd07128 233 TAAKLRAHPNIVARSIRFNAEADSLNAAILGPDATPGTPEFDLFVKEVAREMTVKAGQKCTAIRRAFVPEARV-DAVIEA 311 (513)
T ss_pred HHHHHHHHhhhhccCceEEEeccCcCcEEECCCCCcchhhHHHHHHHHHHHHHHhcCCcccCCceEEEehHHH-HHHHHH
Confidence 999999863 389999999999999999999 99999999999999998 999999999999999 799999
Q ss_pred HHHHHHHcCC---------------------------------E-EecCccc---------cc-cc-c-C-----C--CC
Q 006484 562 LVVELQHEGV---------------------------------G-LFGGPRA---------SK-LL-Q-I-----P--ET 588 (643)
Q Consensus 562 l~~~~~~~~~---------------------------------~-~~g~~~~---------~~-~~-p-v-----~--~~ 588 (643)
|+++++++.+ + ++|+... .+ |+ | | + .+
T Consensus 312 l~~~~~~l~~G~p~~~~~~lGpli~~~~~~~i~~~i~~a~~~A~vl~GG~~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~ 391 (513)
T cd07128 312 LKARLAKVVVGDPRLEGVRMGPLVSREQREDVRAAVATLLAEAEVVFGGPDRFEVVGADAEKGAFFPPTLLLCDDPDAAT 391 (513)
T ss_pred HHHHHHhcccCCCccCCCCcCCCCCHHHHHHHHHHHHHHHhCCEEEECCCccccccCCCCCCCEEECCEEEeccCCcccc
Confidence 9999987632 1 2344321 23 33 5 2 2 26
Q ss_pred ccccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEecCHHHHHHHHHhcC
Q 006484 589 RLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVD 642 (643)
Q Consensus 589 ~~~~eE~FgPvl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~ 642 (643)
.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++++|+
T Consensus 392 ~i~~eE~FGPVl~V~~~~~~deai~~aN~~~~gL~asvft~d~~~~~~~~~~l~ 445 (513)
T cd07128 392 AVHDVEAFGPVATLMPYDSLAEAIELAARGRGSLVASVVTNDPAFARELVLGAA 445 (513)
T ss_pred hHHhCCCcCCeEEEEeeCCHHHHHHHHhcCCCCeeEEEEeCCHHHHHHHHHHHH
Confidence 889999999999999999999999999999999999999999999999999985
No 106
>cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1. Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.
Probab=100.00 E-value=7e-60 Score=519.76 Aligned_cols=352 Identities=18% Similarity=0.253 Sum_probs=290.7
Q ss_pred HHHcCCceeeEEecCccccccHHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhc
Q 006484 269 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 348 (643)
Q Consensus 269 ~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~g 348 (643)
+|.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|+++++.|+++.++|++++..|++++..
T Consensus 5 ~P~tg~~~~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~-- 76 (453)
T cd07149 5 SPYDGEVIGRVPVAS------EEDVEKAIAAAKEGAKEMKSLPAYERAEILERAAQLLEERREEFARTIALEAGKPIK-- 76 (453)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHH--
Confidence 456788888888877 889999999999999999999999999999999999999999999988877654422
Q ss_pred hhhHHHHHhhcChhHHHHHHHHHHHHhcccc-ccccccccccc--CCCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHHHH
Q 006484 349 YAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTEL--ADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 423 (643)
Q Consensus 349 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~g~~~~~~~~--~~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~~ 423 (643)
++. .++..+++.++++++..+ ..++..+.... ..+...+.+++|+|||++|+|| +|. +.++++++
T Consensus 77 --~a~--------~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ 146 (453)
T cd07149 77 --DAR--------KEVDRAIETLRLSAEEAKRLAGETIPFDASPGGEGRIGFTIREPIGVVAAITPFNFPLNLVAHKVGP 146 (453)
T ss_pred --HHH--------HHHHHHHHHHHHHHHHHHHhcCccccccccCCCCCeeEEEEeecceEEEEECCCCChHHHHHHHHHH
Confidence 221 244445555554432221 11222111000 1133457789999999999998 485 56789999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHHhc
Q 006484 424 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 501 (643)
Q Consensus 424 AlaaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a 501 (643)
||++||+||+|||+.+|.++.++.+++++ + +|+|++|+|++ +.+++..|..||++|+|+||||+.+|+.|++.+
T Consensus 147 ALaaGN~VI~Kps~~~p~~~~~l~~~l~~----ag~P~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a 222 (453)
T cd07149 147 AIAAGNAVVLKPASQTPLSALKLAELLLE----AGLPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAIARKA 222 (453)
T ss_pred HHHcCCEEEEECCCcchHHHHHHHHHHHH----cCcCccceEEeecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHc
Confidence 99999999999999999999999999987 6 99999999995 555577777899999999999999999999887
Q ss_pred C-CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC--------
Q 006484 502 K-IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 571 (643)
Q Consensus 502 ~-~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~-------- 571 (643)
. +|+++|+|||||+||++|||++.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++.+
T Consensus 223 ~~~~~~lelGGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~-d~f~~~L~~~~~~~~~g~p~~~~~ 301 (453)
T cd07149 223 GLKKVTLELGSNAAVIVDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIY-DEFLERFVAATKKLVVGDPLDEDT 301 (453)
T ss_pred CCCceeeecCCCceEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCceEEEcHhHH-HHHHHHHHHHHHhCCcCCCCCCCC
Confidence 5 8999999999999999999999999999999999987 999999999999999 7999999999887632
Q ss_pred --------------------------EE-ecCccccccc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHHc
Q 006484 572 --------------------------GL-FGGPRASKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQ 617 (643)
Q Consensus 572 --------------------------~~-~g~~~~~~~~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~deAi~~aN~ 617 (643)
++ .|+.....++ | | +++.+++||+||||++|++|+|+||||+++|+
T Consensus 302 ~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~ 381 (453)
T cd07149 302 DVGPMISEAEAERIEEWVEEAVEGGARLLTGGKRDGAILEPTVLTDVPPDMKVVCEEVFAPVVSLNPFDTLDEAIAMAND 381 (453)
T ss_pred ccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEEeCCHHHHHHHHhC
Confidence 11 1222111123 5 2 35789999999999999999999999999999
Q ss_pred cCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 618 HGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 618 ~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
++|||++||||+|.+++.+|++++++
T Consensus 382 ~~~gLt~~v~t~d~~~~~~~~~~l~~ 407 (453)
T cd07149 382 SPYGLQAGVFTNDLQKALKAARELEV 407 (453)
T ss_pred CCcCceEEEEcCCHHHHHHHHHHcCc
Confidence 99999999999999999999999874
No 107
>cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like. In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone.
Probab=100.00 E-value=6.9e-60 Score=519.61 Aligned_cols=350 Identities=19% Similarity=0.206 Sum_probs=291.8
Q ss_pred HHHcCCceeeEEecCccccccHHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhc
Q 006484 269 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 348 (643)
Q Consensus 269 ~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~g 348 (643)
+|.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|+++.++|++++..|++++..
T Consensus 3 ~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~-- 74 (455)
T cd07093 3 NPATGEVLAKVPEGG------AAEVDAAVAAAKEAFPGWSRMSPAERARILHKVADLIEARADELALLESLDTGKPIT-- 74 (455)
T ss_pred CCCCCCEEEEEcCCC------HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH--
Confidence 356788888887777 889999999999999999999999999999999999999999999998877654321
Q ss_pred hhhHHHHHhhcChhHHHHHHHHHHHHhcccccc-cccccccccCCCeeEEEEeeeeeeEEEEcCCC-ch-hHHHHHHHHH
Q 006484 349 YAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFESR-PD-ALVQIASLAI 425 (643)
Q Consensus 349 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~~-P~-~~~~~~~~Al 425 (643)
++. ..++..+++.++++++..... +...+ .+.+...+.+++|+|||++|+||| |. ..++++++||
T Consensus 75 --~~~-------~~ev~~~i~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~AL 142 (455)
T cd07093 75 --LAR-------TRDIPRAAANFRFFADYILQLDGESYP---QDGGALNYVLRQPVGVAGLITPWNLPLMLLTWKIAPAL 142 (455)
T ss_pred --HHH-------HHHHHHHHHHHHHHHHhHHHhCCcccc---CCCCceEEEEEEeeeEEEEECCCChHHHHHHHHHHHHH
Confidence 111 124555555555554322111 11111 123455677899999999999984 85 5678999999
Q ss_pred HhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHHhc--
Q 006484 426 RSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 501 (643)
Q Consensus 426 aaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a-- 501 (643)
++||+||+|||+.+|.++.++.+++.+ + +|+|+||++++ +.+.++.|..|+++++|+||||+.+|+.|++.+
T Consensus 143 ~aGN~VIlkps~~~p~~~~~l~~~l~~----aglP~g~v~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~ 218 (455)
T cd07093 143 AFGNTVVLKPSEWTPLTAWLLAELANE----AGLPPGVVNVVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAAP 218 (455)
T ss_pred hcCCEEEeECCCcCcHHHHHHHHHHHh----cCCCccceEEEecCchHHHHHHhcCCCccEEEEECCHHHHHHHHHHHhh
Confidence 999999999999999999999999987 7 99999999995 456777787899999999999999999999876
Q ss_pred -CCCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC--------
Q 006484 502 -KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 571 (643)
Q Consensus 502 -~~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~-------- 571 (643)
.+|+++|||||||+||++|||++.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++.+
T Consensus 219 ~~~~~~lelgG~~~~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~-d~f~~~l~~~~~~~~~g~p~~~~~ 297 (455)
T cd07093 219 NLKPVSLELGGKNPNIVFADADLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIY-DEFLERFVERAKALKVGDPLDPDT 297 (455)
T ss_pred cccceEeecCCCCceEECCCCCHHHHHHHHHHHHHhccCCCcCCCceEEEcHHHH-HHHHHHHHHHHHhCCCCCCCCCCC
Confidence 39999999999999999999999999999999999987 999999999999999 7999999999876531
Q ss_pred --------------------------EE-ecCccc------cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHH
Q 006484 572 --------------------------GL-FGGPRA------SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 610 (643)
Q Consensus 572 --------------------------~~-~g~~~~------~~-~~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~de 610 (643)
++ +|+... .+ ++ | | +++.+++||+||||++|++|+|+||
T Consensus 298 ~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~~~~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~e 377 (455)
T cd07093 298 EVGPLISKEHLEKVLGYVELARAEGATILTGGGRPELPDLEGGYFVEPTVITGLDNDSRVAQEEIFGPVVTVIPFDDEEE 377 (455)
T ss_pred CcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEecCCCCChHHhCCCCCceEEEEeeCCHHH
Confidence 11 233221 12 22 5 2 3578999999999999999999999
Q ss_pred HHHHHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 611 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 611 Ai~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
||+++|+++|||++||||+|.+++++|++++++
T Consensus 378 ai~~~n~~~~gls~~i~t~d~~~~~~~~~~l~~ 410 (455)
T cd07093 378 AIELANDTPYGLAAYVWTRDLGRAHRVARRLEA 410 (455)
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhCCc
Confidence 999999999999999999999999999999874
No 108
>PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=100.00 E-value=7.6e-60 Score=551.57 Aligned_cols=380 Identities=19% Similarity=0.177 Sum_probs=308.9
Q ss_pred hHHHHHHHHHHHcCCc--EEEEeCCC-cchHHHHHcCC-ceeeEEecCccccccHHhHHHHHHHHHHHHHHHhcCCHHHH
Q 006484 240 TAKVNAAYCAACAGIP--VVITSGFA-MDSIIKVLEGK-RVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDR 315 (643)
Q Consensus 240 ~~Kl~aa~~a~~~gv~--v~I~~g~~-~~~l~~~~~g~-~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R 315 (643)
..++.+++...+.... -.|++|.. ...+.+|.+++ .+|++..++ .+++++++++|++||+.|+++|.++|
T Consensus 536 ~~~~~~al~~~~~~~~~~~~~i~g~~~~~~v~nP~~~~~~vg~v~~a~------~~~v~~Ai~aA~~A~~~W~~~~~~~R 609 (1038)
T PRK11904 536 LEPLAAAIAAFLEKQWQAGPIINGEGEARPVVSPADRRRVVGEVAFAD------AEQVEQALAAARAAFPAWSRTPVEER 609 (1038)
T ss_pred HHHHHHHHHHHHhcCceecceEcCCCCeEEEECCCCCCeeEEEEeCCC------HHHHHHHHHHHHHHHHHhccCCHHHH
Confidence 3445555555544332 23336621 12346677776 789988888 89999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhhHHHHHhhcChhHHHHHHHHHHHHhccccc-ccccccccccCCCe
Q 006484 316 RKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGL 394 (643)
Q Consensus 316 ~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~ 394 (643)
.++|++++++|+++.++|+.+++.|.+++. .++ ..++..+++.+++++...+. .+..... ..+.+.
T Consensus 610 a~iL~kaAdll~~~~~eL~~l~~~E~GK~~----~~a--------~~EV~eaid~lr~ya~~a~~~~~~~~~l-~g~~ge 676 (1038)
T PRK11904 610 AAILERAADLLEANRAELIALCVREAGKTL----QDA--------IAEVREAVDFCRYYAAQARRLFGAPEKL-PGPTGE 676 (1038)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHhCCCH----HHH--------HHHHHHHHHHHHHHHHHHHHhhCCCccc-CCCCCc
Confidence 999999999999999999999887765432 222 24677788888887654332 1221110 112345
Q ss_pred eEEEEeeeeeeEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecC-cc
Q 006484 395 ILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-RE 470 (643)
Q Consensus 395 ~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~~AlaaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~-~~ 470 (643)
..+..++|+|||++|+|| ||. +..+++++||++||+||+|||++||+++..+.+++++ + +|+|++|+|+| +.
T Consensus 677 ~n~~~~~P~GVv~~IsPwNfPlai~~~~i~aALaaGNtVIlKPse~tpl~a~~l~~ll~e----AGlP~gvl~lv~G~g~ 752 (1038)
T PRK11904 677 SNELRLHGRGVFVCISPWNFPLAIFLGQVAAALAAGNTVIAKPAEQTPLIAAEAVKLLHE----AGIPKDVLQLLPGDGA 752 (1038)
T ss_pred eeEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEeeCCCcCHHHHHHHHHHHHH----hCcCcceEEEeeCCch
Confidence 567889999999999999 585 5678999999999999999999999999999999987 6 99999999995 55
Q ss_pred hHhHhhhCCCCccEEEeecCHHHHHHHHHhc------CCCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccc
Q 006484 471 EIPDLLKLDDVIDLVIPRGSNKLVSQIKEST------KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNA 543 (643)
Q Consensus 471 ~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a------~~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a 543 (643)
++++.|..||+|++|+||||+.+|+.|++.+ .+|+++|+|||||+||++|||+|+|++.+++|+|.|+| .|+|
T Consensus 753 ~vg~~Lv~~p~v~~V~FTGS~~~g~~I~~~~A~~~g~~~pvi~ElGGkNa~IV~~dAdld~Av~~iv~saF~~aGQ~CsA 832 (1038)
T PRK11904 753 TVGAALTADPRIAGVAFTGSTETARIINRTLAARDGPIVPLIAETGGQNAMIVDSTALPEQVVDDVVTSAFRSAGQRCSA 832 (1038)
T ss_pred HHHHHHhcCCCcCeEEEECCHHHHHHHHHHHhhccCCCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHHhCCCCcccc
Confidence 6788888999999999999999999997654 27999999999999999999999999999999999998 9999
Q ss_pred ceeEEEcCccCCchhHHHHHHHHHHcCCE----------------------------------EecCccc----cccc--
Q 006484 544 METLLVHKDLACNGALNELVVELQHEGVG----------------------------------LFGGPRA----SKLL-- 583 (643)
Q Consensus 544 ~~rv~V~~~i~~~~f~~~l~~~~~~~~~~----------------------------------~~g~~~~----~~~~-- 583 (643)
++|+|||+++| |+|+++|+++++++.++ +.|++.. .++|
T Consensus 833 ~~rl~V~~si~-d~fl~~L~~~~~~l~vGdp~d~~t~~GPvI~~~a~~~l~~~I~~a~~ga~vl~gg~~~~~~~~G~fv~ 911 (1038)
T PRK11904 833 LRVLFVQEDIA-DRVIEMLKGAMAELKVGDPRLLSTDVGPVIDAEAKANLDAHIERMKREARLLAQLPLPAGTENGHFVA 911 (1038)
T ss_pred CcEEEEeHHHH-HHHHHHHHHHHHhccCCCcccccCCccCCCCHHHHHHHHHHHHHHHcCCEEEeCCCCCCCCCCceEEe
Confidence 99999999999 79999999999876431 1222211 1333
Q ss_pred c-C---CCCccccccccCceEEEEEeC--CHHHHHHHHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 584 Q-I---PETRLFHHEYNSMVCTVEIVD--DVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 584 p-v---~~~~~~~eE~FgPvl~v~~~~--~~deAi~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
| | +++.+++||+||||++|++|+ |+||||+++|+++|||+++|||+|.+++.++++++++
T Consensus 912 PTvi~~~~~~~~~eEiFGPVL~V~~~~~~~ldeaI~~iN~t~yGLt~~IfS~d~~~~~~~~~~l~a 977 (1038)
T PRK11904 912 PTAFEIDSISQLEREVFGPILHVIRYKASDLDKVIDAINATGYGLTLGIHSRIEETADRIADRVRV 977 (1038)
T ss_pred eEEEccCCcHHhCCCCcCcEEEEEEeCCCCHHHHHHHHhCCCCCCEEEEEcCCHHHHHHHHHhCCE
Confidence 5 3 356789999999999999998 7999999999999999999999999999999999864
No 109
>cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like. Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species.
Probab=100.00 E-value=8e-60 Score=518.78 Aligned_cols=350 Identities=17% Similarity=0.184 Sum_probs=293.0
Q ss_pred HHHcCCceeeEEecCccccccHHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhc
Q 006484 269 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 348 (643)
Q Consensus 269 ~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~g 348 (643)
+|.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|+++++.|+++.++|++++..|++++..
T Consensus 3 ~P~tg~~i~~~~~~~------~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~-- 74 (451)
T cd07103 3 NPATGEVIGEVPDAG------AADADAAIDAAAAAFKTWRKTTARERAAILRRWADLIRERAEDLARLLTLEQGKPLA-- 74 (451)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH--
Confidence 356788889987777 889999999999999999999999999999999999999999999988877654321
Q ss_pred hhhHHHHHhhcChhHHHHHHHHHHHHhcccc-cccccccccccCCCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHHHHHH
Q 006484 349 YAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAI 425 (643)
Q Consensus 349 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~~Al 425 (643)
++ ..++..+++.+++++...+ ..+...+.. ..+...+.+++|+|||++|+|| +|. ..++++++||
T Consensus 75 --~a--------~~ev~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL 142 (451)
T cd07103 75 --EA--------RGEVDYAASFLEWFAEEARRIYGRTIPSP--APGKRILVIKQPVGVVAAITPWNFPAAMITRKIAPAL 142 (451)
T ss_pred --HH--------HHHHHHHHHHHHHHHHHHHHhcCcccccC--CCCcceEEEEeeceEEEEECCCchHHHHHHHHHHHHH
Confidence 22 1355666666666553322 123222211 1244567889999999999998 586 4578999999
Q ss_pred HhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHHhc--
Q 006484 426 RSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 501 (643)
Q Consensus 426 aaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a-- 501 (643)
++||+||+|||+.+|.++..+.+++++ + ||+|++|+|++ +.+.++.|..|+++|+|+||||+.+|+.+++.+
T Consensus 143 ~aGN~VIlKps~~~~~~~~~l~~~l~~----aglP~g~v~~v~~~~~~~~~~l~~~~~vd~V~ftGs~~~g~~v~~~aa~ 218 (451)
T cd07103 143 AAGCTVVLKPAEETPLSALALAELAEE----AGLPAGVLNVVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAAD 218 (451)
T ss_pred HcCCEEEEECCccCcHHHHHHHHHHHH----cCCCcccEEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh
Confidence 999999999999999999999999987 6 99999999995 445677777889999999999999999998876
Q ss_pred -CCCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC--------
Q 006484 502 -KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 571 (643)
Q Consensus 502 -~~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~-------- 571 (643)
.+|+++|+|||||+||++|||++.|++.+++|+|.|+| .|++++|+|||+++| |+|+++|+++++++.+
T Consensus 219 ~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~-~~f~~~l~~~~~~~~~g~~~~~~~ 297 (451)
T cd07103 219 TVKRVSLELGGNAPFIVFDDADLDKAVDGAIASKFRNAGQTCVCANRIYVHESIY-DEFVEKLVERVKKLKVGNGLDEGT 297 (451)
T ss_pred cCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeeEEEcHHHH-HHHHHHHHHHHHhccCCCCCCCCC
Confidence 38999999999999999999999999999999999998 999999999999999 7999999999887532
Q ss_pred --------------------------EE-ecCccc--cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHH
Q 006484 572 --------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDH 614 (643)
Q Consensus 572 --------------------------~~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~deAi~~ 614 (643)
++ .|+... .+ ++ | | +++.+++||+||||++|++|+|+||||++
T Consensus 298 ~~gp~i~~~~~~~~~~~i~~a~~~ga~~l~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~ 377 (451)
T cd07103 298 DMGPLINERAVEKVEALVEDAVAKGAKVLTGGKRLGLGGYFYEPTVLTDVTDDMLIMNEETFGPVAPIIPFDTEDEVIAR 377 (451)
T ss_pred CCCcCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCcEECCEEeeCCCCcCHHHhCCCCCceEEEEEECCHHHHHHH
Confidence 11 222211 12 23 5 2 35789999999999999999999999999
Q ss_pred HHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 615 IHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 615 aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
+|+++|||+++|||+|.+++++|++++++
T Consensus 378 ~n~~~~gl~~~i~t~d~~~~~~~~~~l~~ 406 (451)
T cd07103 378 ANDTPYGLAAYVFTRDLARAWRVAEALEA 406 (451)
T ss_pred HhCCCCCceEEEECCCHHHHHHHHHhCCc
Confidence 99999999999999999999999999874
No 110
>cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins. ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences.
Probab=100.00 E-value=1.3e-59 Score=514.39 Aligned_cols=333 Identities=20% Similarity=0.239 Sum_probs=276.8
Q ss_pred hHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhhHHHHHhhcChhHHHHHHHHH
Q 006484 292 GAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSI 371 (643)
Q Consensus 292 ~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~ 371 (643)
++++++++|++||+.|+++|.++|.++|+++++.|++|.++|+++++.|++++.. ++ ..++..+++.+
T Consensus 1 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~----~~--------~~ei~~~~~~l 68 (431)
T cd07104 1 DVDRAYAAAAAAQKAWAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTRP----KA--------AFEVGAAIAIL 68 (431)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH----HH--------HHHHHHHHHHH
Confidence 5789999999999999999999999999999999999999999998877654321 21 13556666666
Q ss_pred HHHhcccc-cccccccccccCCCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHH-HHHHH
Q 006484 372 RILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRS-NAILH 447 (643)
Q Consensus 372 ~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~~AlaaGN~vi~Kps~~tp~t-~~~~~ 447 (643)
++++...+ ..+...+. . ..+...+.+++|+|||++|+|| +|. ..++++++||++||+||+|||+.+|.+ +..+.
T Consensus 69 ~~~~~~~~~~~~~~~~~-~-~~g~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~l~ 146 (431)
T cd07104 69 REAAGLPRRPEGEILPS-D-VPGKESMVRRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDSRTPVTGGLLIA 146 (431)
T ss_pred HHHHHHHHHhcCccccC-C-CCCceeEEEEeeeeeEEEECCCCcHHHHHHHHHHHHHHcCCeEEeeCCCCChHHHHHHHH
Confidence 66554332 22222221 1 1344567889999999999998 485 567899999999999999999999998 56788
Q ss_pred HHHHHhcccc-cCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHHhcC---CCEEEecCccceEEEcCCCC
Q 006484 448 KVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK---IPVLGHADGICHVYVDKSAN 522 (643)
Q Consensus 448 ~l~~~a~~~a-lP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a~---~p~~lelGG~~p~iV~~dAd 522 (643)
+++.+ + ||+|++|+|++ +.++++.|..||++++|+||||+.+|+.|+++++ +|+++|||||||+||++|||
T Consensus 147 ~~l~~----aGlP~gvv~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~dad 222 (431)
T cd07104 147 EIFEE----AGLPKGVLNVVPGGGSEIGDALVEHPRVRMISFTGSTAVGRHIGELAGRHLKKVALELGGNNPLIVLDDAD 222 (431)
T ss_pred HHHHH----cCCCcccEEEeeCCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEEcCCCCeEEECCCCC
Confidence 88876 7 99999999995 4557777778999999999999999999988763 89999999999999999999
Q ss_pred HHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC------------------------------
Q 006484 523 LDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------------------------------ 571 (643)
Q Consensus 523 l~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~------------------------------ 571 (643)
++.|++.+++|+|.|+| .|++++|+|||+++| |+|+++|+++++++.+
T Consensus 223 l~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~-~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~ 301 (431)
T cd07104 223 LDLAVSAAAFGAFLHQGQICMAAGRILVHESVY-DEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHAIVEDAV 301 (431)
T ss_pred HHHHHHHHHHHHHhcCCCCcccCcEEEEcHHHH-HHHHHHHHHHHHhcCcCCCCCCCCccCcccCHHHHHHHHHHHHHHH
Confidence 99999999999999988 999999999999999 7999999999887632
Q ss_pred ----EE-ecCccccccc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEecCHHHHHHHHH
Q 006484 572 ----GL-FGGPRASKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLC 639 (643)
Q Consensus 572 ----~~-~g~~~~~~~~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~~~~~~~ 639 (643)
++ +|+.....++ | | +++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++
T Consensus 302 ~~G~~~~~gg~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~ 381 (431)
T cd07104 302 AAGARLLTGGTYEGLFYQPTVLSDVTPDMPIFREEIFGPVAPVIPFDDDEEAVELANDTEYGLSAAVFTRDLERAMAFAE 381 (431)
T ss_pred HCCCEEEeCCCCCCceECCEEeecCCCCChhhhCcCcCCeEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHH
Confidence 11 1221111123 5 2 347899999999999999999999999999999999999999999999999999
Q ss_pred hcCC
Q 006484 640 QVDR 643 (643)
Q Consensus 640 ~l~~ 643 (643)
++++
T Consensus 382 ~l~~ 385 (431)
T cd07104 382 RLET 385 (431)
T ss_pred hcCc
Confidence 9874
No 111
>KOG2456 consensus Aldehyde dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=7.9e-60 Score=472.51 Aligned_cols=336 Identities=20% Similarity=0.252 Sum_probs=287.5
Q ss_pred hHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhhHHHHHhhcChhHHHHHHHHH
Q 006484 292 GAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSI 371 (643)
Q Consensus 292 ~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~ 371 (643)
.+.+.++++|.+|.+-++.|.+.|...|+++...+++|.++|.+++.+|+.+.+. ++...++....++++.+++.+
T Consensus 3 ~~~~~v~~~R~~F~sGrtr~~efR~~QL~~L~r~i~e~e~~i~~Al~~DL~k~~~----es~~~Ev~~~~~~i~~~l~~L 78 (477)
T KOG2456|consen 3 AISETVRRLRLAFSSGRTRPLEFRKQQLEALYRMIQENEKEIIEALAADLHKPEL----ESYLNEVGYVLNEIRYALENL 78 (477)
T ss_pred cHHHHHHHHHHHHhcCCcCChHHHHHHHHHHHHHHHhhHHHHHHHHHHHhccchh----HHHHHHHHHHHHHHHHHHHhh
Confidence 3456688999999999999999999999999999999999999999999977643 445566667788999999999
Q ss_pred HHHhcccccccccccccccCCCeeEEEEeeeeeeEEEEcCC-Cc-hhHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHH
Q 006484 372 RILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RP-DALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKV 449 (643)
Q Consensus 372 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~-~P-~~~~~~~~~AlaaGN~vi~Kps~~tp~t~~~~~~l 449 (643)
+.|+.... ...... +.. .+.++..+|+|||++|+|| || ++++.++++||||||+||+||||.+|.++.+++++
T Consensus 79 ~~wv~~~~-v~~~~~--t~~--dk~~I~~~p~GvVLiI~~wNyP~~L~l~PligAiAAGN~VVlKPSEls~n~a~~lakl 153 (477)
T KOG2456|consen 79 PEWVKPEP-VKKSFL--TFL--DKAYIEKEPLGVVLIIGPWNYPLNLTLVPLIGAIAAGNAVVLKPSELSPNTAKLLAKL 153 (477)
T ss_pred HHhccccc-cCcccc--ccc--CceeEEecCCceEEEEccCCCcceeehhhhhhhhhcCCEEEechhhcChhHHHHHHHH
Confidence 99875322 211111 111 2457889999999999999 48 57789999999999999999999999999999999
Q ss_pred HHHhcccccCcCceEeec-CcchHhHhhhCCCCccEEEeecCHHHHHHHHHhcC---CCEEEecCccceEEEcCCCCHHH
Q 006484 450 ITSAIPDTVGEKLIGLVT-SREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK---IPVLGHADGICHVYVDKSANLDV 525 (643)
Q Consensus 450 ~~~a~~~alP~g~v~~v~-~~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a~---~p~~lelGG~~p~iV~~dAdl~~ 525 (643)
+.+ +||.++++||. |.+++.++|.+ ++|+|+||||+.+||.||.+|+ +||+||||||+|++|++|+|++-
T Consensus 154 lp~----Yld~~~~~VV~Ggv~ETt~LL~~--rfD~IfyTGsp~VgkIim~aAaKhLTPvtLELGGKsP~~vd~~~d~~i 227 (477)
T KOG2456|consen 154 LPQ----YLDQDLIRVVNGGVPETTELLKQ--RFDHIFYTGSPRVGKIIMAAAAKHLTPVTLELGGKSPCYVDKNCDLKI 227 (477)
T ss_pred HHH----hcCcceEEEecCCCchHHHHHHh--hccEEEecCCchHHHHHHHHHHhcCCcEEEEcCCCCCeeecCCcCHHH
Confidence 986 59999999999 46788999974 7999999999999999998873 99999999999999999999999
Q ss_pred HHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHc-CC----------------------------E-Ee
Q 006484 526 AKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHE-GV----------------------------G-LF 574 (643)
Q Consensus 526 A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~-~~----------------------------~-~~ 574 (643)
|+++|+||++.|+| +|+|+++++++.+++ +.++++++..+++. |- + +.
T Consensus 228 a~~RI~~gk~~N~GQtCvapDYiL~~k~~~-~kli~alk~~l~eFYG~n~~eS~d~sRiIn~~hf~Rl~~ll~~~~kv~~ 306 (477)
T KOG2456|consen 228 AARRIAWGKWMNSGQTCVAPDYILCSKSIQ-PKLIDALKSTLKEFYGENPKESKDLSRIINQRHFQRLSALLDETGKVAI 306 (477)
T ss_pred HHHHHHHHhhccCCCeeccCCeEEecHhhh-HHHHHHHHHHHHHHhCCCccccccHHHHhhHHHHHHHHHHhcCCCceec
Confidence 99999999999998 999999999999999 89999998888764 10 0 12
Q ss_pred cCcccc--ccc-c-----CC-CCccccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 575 GGPRAS--KLL-Q-----IP-ETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 575 g~~~~~--~~~-p-----v~-~~~~~~eE~FgPvl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
|++... .++ | |+ ++++|+||+|||||||+.|+++||+|+.+|+.+.+|++|+||+|.....+|.+++.+
T Consensus 307 Gg~~d~~d~~I~PTIL~DV~~~~p~M~eEIFGPiLPIi~v~~l~Eai~~In~~eKPLa~Y~Fs~n~~~vkr~l~~tsS 384 (477)
T KOG2456|consen 307 GGESDESDRYIAPTILLDVPEDSPVMQEEIFGPILPIITVQSLDEAINFINEREKPLALYIFSNNEKLVKRFLTETSS 384 (477)
T ss_pred CCccchhhcccCCeEEecCCCCChhhhhhhccCccceeEhhhHHHHHHHHhcCCCceEEEEecCCHHHHHHHHHhccC
Confidence 333221 133 4 23 579999999999999999999999999999999999999999999999999988754
No 112
>cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11. NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants.
Probab=100.00 E-value=1.8e-59 Score=518.23 Aligned_cols=353 Identities=21% Similarity=0.263 Sum_probs=292.0
Q ss_pred HHHHcCCceeeEEecCccccccHHhHHHHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Q 006484 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQAL-QSQDRRKILLDVADALEANESLIKVENEADVAAAQE 346 (643)
Q Consensus 268 ~~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~-~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~ 346 (643)
.+|.+|+.++++...+ .+++++++++|++||+.|+++ |.++|.++|++++++|++++++|++++.+|++++..
T Consensus 21 ~~P~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~ 94 (473)
T cd07082 21 YSPIDGEVIGSVPALS------ALEILEAAETAYDAGRGWWPTMPLEERIDCLHKFADLLKENKEEVANLLMWEIGKTLK 94 (473)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHH
Confidence 4466788888888777 889999999999999999998 999999999999999999999999999887765432
Q ss_pred hchhhHHHHHhhcChhHHHHHHHHHHHHhccccc-cccccccccc--CCCeeEEEEeeeeeeEEEEcCCC-ch-hHHHHH
Q 006484 347 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTEL--ADGLILEKTSCPLGVLLIVFESR-PD-ALVQIA 421 (643)
Q Consensus 347 ~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g~~~~~~~~--~~~~~~~~~~~PlGvv~~I~p~~-P~-~~~~~~ 421 (643)
++. .++...++.++++++..+. .|...+.... ..+...+.+|+|+|||++|+||| |. ++++++
T Consensus 95 ----~a~--------~ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i 162 (473)
T cd07082 95 ----DAL--------KEVDRTIDYIRDTIEELKRLDGDSLPGDWFPGTKGKIAQVRREPLGVVLAIGPFNYPLNLTVSKL 162 (473)
T ss_pred ----HHH--------HHHHHHHHHHHHHHHHHHHhcCCcccccccccCCCceeEEEEecceEEEEECCcCcHHHHHHHHH
Confidence 221 1344444444444332211 1221111000 12345678899999999999985 85 567899
Q ss_pred HHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHH
Q 006484 422 SLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKE 499 (643)
Q Consensus 422 ~~AlaaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~ 499 (643)
++||++||+||+|||+.+|.++.++.+++.+ + +|+|++|++++ +.++++.|..||++|+|+||||+.+|+.|++
T Consensus 163 ~~AL~aGN~vilKps~~~~~~~~~l~~~l~~----aglp~~~~~vv~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~ 238 (473)
T cd07082 163 IPALIMGNTVVFKPATQGVLLGIPLAEAFHD----AGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRLKK 238 (473)
T ss_pred HHHHHcCCEEEEECCCCCcHHHHHHHHHHHH----cCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 9999999999999999999999999999987 6 99999999995 4556777778999999999999999999998
Q ss_pred hc-CCCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCCE-----
Q 006484 500 ST-KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVG----- 572 (643)
Q Consensus 500 ~a-~~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~~----- 572 (643)
.+ .+|+++|+|||||+||++|||++.|++.+++++|.|+| .|+|++|+|||+++| |+|+++|.++++++.+.
T Consensus 239 ~a~~~~~~lelgg~n~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~-d~f~~~l~~~~~~~~~g~~~~~ 317 (473)
T cd07082 239 QHPMKRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIKRVLVHESVA-DELVELLKEEVAKLKVGMPWDN 317 (473)
T ss_pred HhCCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHHhCCCcCCCCeEEEEcHHHH-HHHHHHHHHHHhcCCCCCCCCC
Confidence 86 59999999999999999999999999999999999998 999999999999999 79999999998876421
Q ss_pred -----------------------------E-ecCccccc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHH
Q 006484 573 -----------------------------L-FGGPRASK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDH 614 (643)
Q Consensus 573 -----------------------------~-~g~~~~~~-~~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~deAi~~ 614 (643)
+ .|+....+ ++ | | +++++++||+||||++|++|+|+||||++
T Consensus 318 ~~~~gp~i~~~~~~~~~~~~~~a~~~ga~~~~gg~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~ 397 (473)
T cd07082 318 GVDITPLIDPKSADFVEGLIDDAVAKGATVLNGGGREGGNLIYPTLLDPVTPDMRLAWEEPFGPVLPIIRVNDIEEAIEL 397 (473)
T ss_pred CCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCeEEeeEEEecCCCCCHHHhCcCcCceEEEEEeCCHHHHHHH
Confidence 1 12221112 22 5 2 35789999999999999999999999999
Q ss_pred HHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 615 IHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 615 aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
+|+++|||++||||+|.+++.++++++++
T Consensus 398 ~n~~~~gL~~~v~t~d~~~~~~~~~~l~~ 426 (473)
T cd07082 398 ANKSNYGLQASIFTKDINKARKLADALEV 426 (473)
T ss_pred HhCCCCCceEEEEeCCHHHHHHHHHhCCc
Confidence 99999999999999999999999999874
No 113
>PRK11903 aldehyde dehydrogenase; Provisional
Probab=100.00 E-value=1e-59 Score=520.29 Aligned_cols=348 Identities=18% Similarity=0.206 Sum_probs=282.9
Q ss_pred HHHHcCCceeeEEecCccccccHHhHHHHHHHHHHHH-HHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Q 006484 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESS-RRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 346 (643)
Q Consensus 268 ~~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~-~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~ 346 (643)
.+|.+|+.++++.. . .+++++++++|++|| +.|+++|..+|.++|++++++|+++.++|+++++.|.|++.
T Consensus 24 ~nP~tge~l~~v~~-~------~~dv~~Av~aA~~A~~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela~~~~~e~Gkp~- 95 (521)
T PRK11903 24 FDPVTGEELVRVSA-T------GLDLAAAFAFAREQGGAALRALTYAQRAALLAAIVKVLQANRDAYYDIATANSGTTR- 95 (521)
T ss_pred ECCCCCCEEEEecC-C------hHHHHHHHHHHHHhhhhhhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCH-
Confidence 34567888888764 5 679999999999995 99999999999999999999999999999998877665432
Q ss_pred hchhhHHHHHhhcChhHHHHHHHHHHHHhcccccc-cccccc-c-----ccCCCeeEEEEeee-eeeEEEEcCCC-ch-h
Q 006484 347 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKR-T-----ELADGLILEKTSCP-LGVLLIVFESR-PD-A 416 (643)
Q Consensus 347 ~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-g~~~~~-~-----~~~~~~~~~~~~~P-lGvv~~I~p~~-P~-~ 416 (643)
.++ ..++..+++.+++++++.+.. +..... . ........+..|+| +|||++|+||| |. +
T Consensus 96 ---~~a--------~~ev~~~i~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN~P~~~ 164 (521)
T PRK11903 96 ---NDS--------AVDIDGGIFTLGYYAKLGAALGDARLLRDGEAVQLGKDPAFQGQHVLVPTRGVALFINAFNFPAWG 164 (521)
T ss_pred ---HHH--------HHHHHHHHHHHHHHHHHHHHcCCCcccCCCccccccccccccceEEEecCcceEEEECCcchHHHH
Confidence 222 236777777777776543221 111100 0 00011223567899 69999999995 85 5
Q ss_pred HHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHH
Q 006484 417 LVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLV 494 (643)
Q Consensus 417 ~~~~~~~AlaaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g 494 (643)
+.++++|||++||+||+|||+.||.++..+++++.++ . ||+|++|+|+| ++++.+.| +++|+|+||||+.+|
T Consensus 165 ~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~a---g~lP~gv~~~v~g~~~~~~~~l---~~v~~v~fTGS~~~G 238 (521)
T PRK11903 165 LWEKAAPALLAGVPVIVKPATATAWLTQRMVKDVVAA---GILPAGALSVVCGSSAGLLDHL---QPFDVVSFTGSAETA 238 (521)
T ss_pred HHHHHHHHHHcCCeEEEEcCCcChHHHHHHHHHHHHh---CCCCcCceEEeeCCchHHHhcc---cCCCEEEEECCHHHH
Confidence 6789999999999999999999999999999999873 4 89999999995 44444433 689999999999999
Q ss_pred HHHHHhc-----CCCEEEecCccceEEEcCCCC-----HHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHH
Q 006484 495 SQIKEST-----KIPVLGHADGICHVYVDKSAN-----LDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELV 563 (643)
Q Consensus 495 ~~i~~~a-----~~p~~lelGG~~p~iV~~dAd-----l~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~ 563 (643)
+++++.+ .+|+++|||||||+||++||| +|.|++.+++|+|.|+| +|++++|+|||+++| |+|+++|+
T Consensus 239 ~~v~~~aa~~~~~~~~~lElGGknp~IV~~dAd~~~~~~~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~-d~f~~~L~ 317 (521)
T PRK11903 239 AVLRSHPAVVQRSVRVNVEADSLNSALLGPDAAPGSEAFDLFVKEVVREMTVKSGQKCTAIRRIFVPEALY-DAVAEALA 317 (521)
T ss_pred HHHHhhhhhhccCceeEeeccccCceEEccCCcccchhHHHHHHHHHHHHHhccCCCccCCeEEEEehhHH-HHHHHHHH
Confidence 9998853 389999999999999999999 59999999999999998 999999999999999 79999999
Q ss_pred HHHHHcCC---------------------------------EE-ecCcc--------ccc-cc-c-C-----CC--Cccc
Q 006484 564 VELQHEGV---------------------------------GL-FGGPR--------ASK-LL-Q-I-----PE--TRLF 591 (643)
Q Consensus 564 ~~~~~~~~---------------------------------~~-~g~~~--------~~~-~~-p-v-----~~--~~~~ 591 (643)
++++++.+ ++ +|+.. ..+ ++ | | ++ +.++
T Consensus 318 ~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~~~~ga~vl~gg~~~~~~~~~~~~g~~~~PTvl~~~~~~~~~~i~ 397 (521)
T PRK11903 318 ARLAKTTVGNPRNDGVRMGPLVSRAQLAAVRAGLAALRAQAEVLFDGGGFALVDADPAVAACVGPTLLGASDPDAATAVH 397 (521)
T ss_pred HHHHhccCCCCCCCcCccCCCCCHHHHHHHHHHHHHHhcCCEEEECCccCCCCCCCCCCCeEEcCEEEeccCCCccchHH
Confidence 99887632 12 24422 113 33 5 2 22 5788
Q ss_pred cccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEecCHHHHHHHHHhc
Q 006484 592 HHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQV 641 (643)
Q Consensus 592 ~eE~FgPvl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~~~~~~~~l 641 (643)
+||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++
T Consensus 398 ~eE~FGPvl~V~~~~~~~eai~~~N~~~~gL~asvft~d~~~~~~~~~~l 447 (521)
T PRK11903 398 DVEVFGPVATLLPYRDAAHALALARRGQGSLVASVYSDDAAFLAAAALEL 447 (521)
T ss_pred hCcccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999988
No 114
>PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.5e-59 Score=535.27 Aligned_cols=348 Identities=19% Similarity=0.220 Sum_probs=281.4
Q ss_pred HHHHcCCceeeEEecCccccccHHhHHHHHHHHHHH-HHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Q 006484 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARES-SRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 346 (643)
Q Consensus 268 ~~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a-~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~ 346 (643)
.+|.+|+.++++...+ +++++|+++|++| |+.|+++|..+|.++|++++++|++|.++|++ ++.|++++
T Consensus 24 ~nP~tg~~i~~~~~~~-------~dv~~Av~~A~~A~~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela~-l~~e~GK~-- 93 (675)
T PRK11563 24 HDAVTGEPVARVSSEG-------LDFAAALAYAREVGGPALRALTFHERAAMLKALAKYLLERKEELYA-LSAQTGAT-- 93 (675)
T ss_pred cCCCCCCEEEEEcCCc-------HHHHHHHHHHHHhhhhhhhcCCHHHHHHHHHHHHHHHHHhHHHHHH-HHHHhCCC--
Confidence 4466788888876543 4899999999998 79999999999999999999999999999998 46555432
Q ss_pred hchhhHHHHHhhcChhHHHHHHHHHHHHhccccc---------ccccccccccCCCeeEEEEeeee-eeEEEEcCCC-ch
Q 006484 347 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP---------IGQILKRTELADGLILEKTSCPL-GVLLIVFESR-PD 415 (643)
Q Consensus 347 ~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~---------~g~~~~~~~~~~~~~~~~~~~Pl-Gvv~~I~p~~-P~ 415 (643)
..++ ..++...++.++++++..+. .|+..+.. .+.....+..++|+ |||++|+||| |.
T Consensus 94 --~~~a--------~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~p~~GVv~~I~PwNfP~ 162 (675)
T PRK11563 94 --RRDS--------WIDIEGGIGTLFTYASKGRRELPNDTVLVEGEVEPLS-KGGTFAGRHILTPLEGVAVHINAFNFPV 162 (675)
T ss_pred --HHHH--------HHHHHHHHHHHHHHHHHHhhhccccccccCCcccccc-CCCcccceEEEeecCceEEEECCCchHH
Confidence 1222 12555666666666543311 12222110 01112246788997 9999999995 85
Q ss_pred -hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecCcchHhHhhhCCCCccEEEeecCHHH
Q 006484 416 -ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKL 493 (643)
Q Consensus 416 -~~~~~~~~AlaaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~~~~~~~~l~~~~~v~~i~fTGs~~~ 493 (643)
+.+++++|||++||+||+||||.||+++.++++++.++ . +|+|++|+|+|. .++++..++.+++|+||||+++
T Consensus 163 ~~~~~~i~pALaaGN~VV~KPse~tp~~a~~l~~~~~ea---G~~P~gv~~vv~g~--~~~~~~~~~~i~~v~FTGS~~~ 237 (675)
T PRK11563 163 WGMLEKLAPAFLAGVPAIVKPATATAYLTEAVVRLIVES---GLLPEGALQLICGS--AGDLLDHLDGQDVVTFTGSAAT 237 (675)
T ss_pred HHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHc---CCCCCCcEEEeeCC--HHHHhhcCCCCCEEEEECcHHH
Confidence 56799999999999999999999999999999999874 4 899999999963 2345555567999999999999
Q ss_pred HHHHHHhc-----CCCEEEecCccceEEEcCCCC-----HHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHH
Q 006484 494 VSQIKEST-----KIPVLGHADGICHVYVDKSAN-----LDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNEL 562 (643)
Q Consensus 494 g~~i~~~a-----~~p~~lelGG~~p~iV~~dAd-----l~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l 562 (643)
|++|++.+ .+|+++|||||||+||++||| +|.|++.+++|+|.|+| +|+|++|+|||++|| |+|+++|
T Consensus 238 G~~i~~~~~a~~~~~~~~lELGGknp~IV~~DAd~~~~dld~aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~-d~f~~~l 316 (675)
T PRK11563 238 AQKLRAHPNVVANSVPFTAEADSLNAAILGPDATPGTPEFDLFVKEVVREMTVKAGQKCTAIRRAIVPRALV-DAVIEAL 316 (675)
T ss_pred HHHHHhhhhhhhCCceEEEecCCcCceEECCCCCcCchhHHHHHHHHHHHHHHhCCCccccceeEEeeHHHH-HHHHHHH
Confidence 99998842 399999999999999999995 99999999999999998 999999999999999 7999999
Q ss_pred HHHHHHcCC---------------------------------E-EecCcc---------ccccc--c-C----CC---Cc
Q 006484 563 VVELQHEGV---------------------------------G-LFGGPR---------ASKLL--Q-I----PE---TR 589 (643)
Q Consensus 563 ~~~~~~~~~---------------------------------~-~~g~~~---------~~~~~--p-v----~~---~~ 589 (643)
+++++++.+ + ++|+.. ..++| | | +. +.
T Consensus 317 ~~~~~~l~vG~p~d~~t~~GPli~~~~~~~i~~~i~~a~~~a~vl~Gg~~~~~~~~~~~~~g~f~~PTvl~~v~~~~~~~ 396 (675)
T PRK11563 317 RARLAKVVVGDPRLEGVRMGALASLEQREDVREKVAALLAAAEIVFGGPDSFEVVGADAEKGAFFPPTLLYCDDPLEAPA 396 (675)
T ss_pred HHHHhcCccCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhCCEEEECCcccccccCCCCCCCeeECCEEEeccCchhhhh
Confidence 999987632 1 234421 12333 6 2 22 47
Q ss_pred cccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEecCHHHHHHHHHhcC
Q 006484 590 LFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVD 642 (643)
Q Consensus 590 ~~~eE~FgPvl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~ 642 (643)
+++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.+++++++
T Consensus 397 i~~eEiFGPVl~V~~~~~~~eai~~aN~s~~gL~asvft~d~~~a~~~~~~l~ 449 (675)
T PRK11563 397 VHDVEAFGPVSTLMPYDDLDEAIELAARGKGSLVASLVTADPEVARELVLGAA 449 (675)
T ss_pred HhhccccCCceEEEecCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999985
No 115
>PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=100.00 E-value=3.9e-59 Score=549.45 Aligned_cols=341 Identities=17% Similarity=0.192 Sum_probs=292.4
Q ss_pred HHHHHc-CCceeeEEecCccccccHHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Q 006484 267 IIKVLE-GKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 345 (643)
Q Consensus 267 l~~~~~-g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~ 345 (643)
+.+|.+ ++.+|++..++ .+++++|+++|++||+.|+++|..+|.++|++++++|++|.++|+.++.+|.||+.
T Consensus 663 v~nPa~~~~~vg~v~~a~------~~dv~~Av~aA~~A~~~W~~~p~~eRa~iL~r~Adlle~~~~eL~~l~~~EaGKt~ 736 (1318)
T PRK11809 663 VINPADPRDIVGYVREAT------PAEVEQALESAVNAAPIWFATPPAERAAILERAADLMEAQMQTLMGLLVREAGKTF 736 (1318)
T ss_pred eECCCCCCeeEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCH
Confidence 355665 56778888887 89999999999999999999999999999999999999999999999887765432
Q ss_pred HhchhhHHHHHhhcChhHHHHHHHHHHHHhcccccccccccccccCCCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHHHH
Q 006484 346 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 423 (643)
Q Consensus 346 ~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~~ 423 (643)
.++ ..|+..+++.+++|+...+. .. ....++|+|||++|+|| ||. +...++++
T Consensus 737 ----~~A--------~~EV~eaidflryyA~~a~~---~~----------~~~~~~PlGVV~~IsPWNFPlai~~g~iaa 791 (1318)
T PRK11809 737 ----SNA--------IAEVREAVDFLRYYAGQVRD---DF----------DNDTHRPLGPVVCISPWNFPLAIFTGQVAA 791 (1318)
T ss_pred ----HHH--------HHHHHHHHHHHHHHHHHHHH---hc----------CCceeecccEEEEECCCccHHHHHHHHHHH
Confidence 222 34788899999998754321 00 02358999999999999 485 56789999
Q ss_pred HHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHHhc
Q 006484 424 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 501 (643)
Q Consensus 424 AlaaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a 501 (643)
||++||+||+||||+||+++..+++++++ + +|+|++|+|+| ++++++.|..||+|++|+||||+++|+.|++.+
T Consensus 792 ALaAGN~VV~KPseqTpl~a~~lv~ll~e----AGlP~gvlqlv~G~g~~vg~~Lv~~p~V~~V~FTGSt~tg~~I~~~a 867 (1318)
T PRK11809 792 ALAAGNSVLAKPAEQTPLIAAQAVRILLE----AGVPAGVVQLLPGRGETVGAALVADARVRGVMFTGSTEVARLLQRNL 867 (1318)
T ss_pred HHHcCCeEEEeCCCCcHHHHHHHHHHHHH----hCcCcCeEEEeeCCcHHHHHHHhcCCCcCEEEEeCCHHHHHHHHHHH
Confidence 99999999999999999999999999988 6 99999999995 666788888999999999999999999998764
Q ss_pred C---------CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC
Q 006484 502 K---------IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV 571 (643)
Q Consensus 502 ~---------~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~ 571 (643)
+ +|+++|+|||||+||++|||+|+|++.+++|+|.|+| +|+|++|+|||++|| |+|+++|+++++++.+
T Consensus 868 A~~l~~~g~~~pliaElGGkNa~IVdsdAdle~Av~~iv~sAF~~aGQrCsA~~rl~V~e~Ia-d~fl~~L~~a~~~l~v 946 (1318)
T PRK11809 868 AGRLDPQGRPIPLIAETGGQNAMIVDSSALTEQVVADVLASAFDSAGQRCSALRVLCLQDDVA-DRTLKMLRGAMAECRM 946 (1318)
T ss_pred hhhcccccCceeEEEecCCccceEECCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEcHHHH-HHHHHHHHHHHHhcCC
Confidence 1 6999999999999999999999999999999999988 999999999999999 7999999999988642
Q ss_pred E----------------------------------Ee-cCcc-----ccccc--c-C---CCCccccccccCceEEEEEe
Q 006484 572 G----------------------------------LF-GGPR-----ASKLL--Q-I---PETRLFHHEYNSMVCTVEIV 605 (643)
Q Consensus 572 ~----------------------------------~~-g~~~-----~~~~~--p-v---~~~~~~~eE~FgPvl~v~~~ 605 (643)
+ ++ |+.. ..++| | | +++.+++||+||||++|++|
T Consensus 947 GdP~~~~tdvGPvId~~a~~~i~~~I~~a~~~G~~v~~g~~~~~~~~~~G~fv~PTIi~~~~~~~l~eEiFGPVL~V~~~ 1026 (1318)
T PRK11809 947 GNPDRLSTDIGPVIDAEAKANIERHIQAMRAKGRPVFQAARENSEDWQSGTFVPPTLIELDSFDELKREVFGPVLHVVRY 1026 (1318)
T ss_pred CCcccccCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCCCCCCCCCCCeEEeeEEEeccchhhhcCcccCceEEEEEe
Confidence 1 11 1110 11333 5 2 45678999999999999999
Q ss_pred C--CHHHHHHHHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 606 D--DVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 606 ~--~~deAi~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
+ |+||||+++|+++|||+++|||+|.+++.++++++++
T Consensus 1027 ~~~~ldeaI~~iN~t~yGLt~gV~Srd~~~~~~v~~~l~a 1066 (1318)
T PRK11809 1027 NRNQLDELIEQINASGYGLTLGVHTRIDETIAQVTGSAHV 1066 (1318)
T ss_pred CCCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHhCCE
Confidence 6 7999999999999999999999999999999999874
No 116
>cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase. Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids.
Probab=100.00 E-value=7.8e-59 Score=508.65 Aligned_cols=336 Identities=17% Similarity=0.178 Sum_probs=274.7
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhhHHHHHhhcChhHHHHHHHHHH
Q 006484 293 AREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIR 372 (643)
Q Consensus 293 v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~ 372 (643)
+++++++|++||+.|+++|.++|.++|++++++|+++.++|+++++.|++++.. ++ ..++..+++.++
T Consensus 1 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gkp~~----~~--------~~ev~~~~~~l~ 68 (454)
T cd07129 1 VDAAAAAAAAAFESYRALSPARRAAFLEAIADEIEALGDELVARAHAETGLPEA----RL--------QGELGRTTGQLR 68 (454)
T ss_pred ChHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChH----HH--------HHHHHHHHHHHH
Confidence 468899999999999999999999999999999999999999988776654321 11 124555555555
Q ss_pred HHhcccc---ccccccccc-c---cCCCeeEEEEeeeeeeEEEEcCC-Cchh---HHHHHHHHHHhCCEEEEeCCcchHH
Q 006484 373 ILADMEE---PIGQILKRT-E---LADGLILEKTSCPLGVLLIVFES-RPDA---LVQIASLAIRSGNGLLLKGGKEAMR 441 (643)
Q Consensus 373 ~~~~~~~---~~g~~~~~~-~---~~~~~~~~~~~~PlGvv~~I~p~-~P~~---~~~~~~~AlaaGN~vi~Kps~~tp~ 441 (643)
+++...+ +.+...... . ...+...+.+++|+|||++|+|| +|.. .++++++||++||+||+|||+.+|.
T Consensus 69 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~a~ALaaGN~VVlKps~~~p~ 148 (454)
T cd07129 69 LFADLVREGSWLDARIDPADPDRQPLPRPDLRRMLVPLGPVAVFGASNFPLAFSVAGGDTASALAAGCPVVVKAHPAHPG 148 (454)
T ss_pred HHHHHHHhcCCccccccccccccCCCCCccceEEeeccceEEEECCCCCchhhhhhhhhHHHHHHcCCeEEEEcCCCCch
Confidence 5543221 112211100 0 01122346789999999999999 5853 3479999999999999999999999
Q ss_pred HHHHHHHHHHHhcccc-cCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHHhc-----CCCEEEecCccce
Q 006484 442 SNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-----KIPVLGHADGICH 514 (643)
Q Consensus 442 t~~~~~~l~~~a~~~a-lP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a-----~~p~~lelGG~~p 514 (643)
++.++++++.+++.++ +|+|++|+|++ +.+.++.|..||+|++|+||||+.+|+.|++.+ .+|+++|||||||
T Consensus 149 t~~~l~~~~~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~p~~lElGG~n~ 228 (454)
T cd07129 149 TSELVARAIRAALRATGLPAGVFSLLQGGGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYAELGSVNP 228 (454)
T ss_pred HHHHHHHHHHHHHHHhCCChhheEEeeCCcHHHHHHHhcCCCccEEEEeCChHHHHHHHHHhhccCccceeEeecCCcCc
Confidence 9999999999888888 99999999995 445677777899999999999999999998865 3799999999999
Q ss_pred EEEcCCC---CHHHHHHHHHhhcCCCCC-ccccceeEEEcCc-cCCchhHHHHHHHHHHcC-------------------
Q 006484 515 VYVDKSA---NLDVAKNIVIDAKIDYPA-ACNAMETLLVHKD-LACNGALNELVVELQHEG------------------- 570 (643)
Q Consensus 515 ~iV~~dA---dl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~-i~~~~f~~~l~~~~~~~~------------------- 570 (643)
+||++|| |+|.|++.+++|+|.|+| +|+|++|+|||++ +| |+|+++|.++++++.
T Consensus 229 ~iV~~da~~~dl~~aa~~i~~~~~~~~GQ~C~a~~rv~v~~~~i~-d~f~~~l~~~~~~~~~g~~~~~~~~~~~~~~i~~ 307 (454)
T cd07129 229 VFILPGALAERGEAIAQGFVGSLTLGAGQFCTNPGLVLVPAGPAG-DAFIAALAEALAAAPAQTMLTPGIAEAYRQGVEA 307 (454)
T ss_pred EEEeCCcchHHHHHHHHHHHHHHhcCCCCeecCCceEEEeCcccH-HHHHHHHHHHHhccCCCCCcChHHHHHHHHHHHH
Confidence 9999999 899999999999999988 9999999999999 99 799999998887653
Q ss_pred ------CEE-ecCccc-cc-cc-c-C----C----CCccccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEecC-
Q 006484 571 ------VGL-FGGPRA-SK-LL-Q-I----P----ETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAED- 630 (643)
Q Consensus 571 ------~~~-~g~~~~-~~-~~-p-v----~----~~~~~~eE~FgPvl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d- 630 (643)
.++ .|+... .+ ++ | | + ++++++||+||||++|++|+|+||||+++|+++|||++||||+|
T Consensus 308 a~~~~ga~~l~gg~~~~~g~~~~Ptvl~~~~~~~~~~~i~~~E~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~vft~d~ 387 (454)
T cd07129 308 LAAAPGVRVLAGGAAAEGGNQAAPTLFKVDAAAFLADPALQEEVFGPASLVVRYDDAAELLAVAEALEGQLTATIHGEED 387 (454)
T ss_pred HHhcCCcEEEeCCCcCCCCCccCCEEEEccCCccccchhhcccCCCCeEEEEEeCCHHHHHHHHhcCCCCcEEEEEccCc
Confidence 222 244321 12 33 5 2 2 47899999999999999999999999999999999999999999
Q ss_pred -HHHHHHHHHhc
Q 006484 631 -QKVAETFLCQV 641 (643)
Q Consensus 631 -~~~~~~~~~~l 641 (643)
.+++++++++|
T Consensus 388 ~~~~a~~~~~~l 399 (454)
T cd07129 388 DLALARELLPVL 399 (454)
T ss_pred hHHHHHHHHHHH
Confidence 89999999987
No 117
>cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family. The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group.
Probab=100.00 E-value=2.1e-58 Score=497.93 Aligned_cols=337 Identities=21% Similarity=0.229 Sum_probs=283.5
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhhHHHHHhhcChhHHHHHHHHHHHHhcc
Q 006484 298 VAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADM 377 (643)
Q Consensus 298 ~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 377 (643)
++|++||+.|+++|.++|.++|++++++|++|+++|+++++.|++++... ..+...+++.....++..+++.+++++..
T Consensus 1 ~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~-~~~~~~~~~~~~~~ev~~~~~~~~~~a~~ 79 (397)
T cd07077 1 ESAKNAQRTLAVNHDEQRDLIINAIANALYDTRQRLASEAVSERGAYIRS-LIANWIAMMGCSESKLYKNIDTERGITAS 79 (397)
T ss_pred ChHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-ccHHHHHHhCCcHHHHHHHHHHHHHHHHh
Confidence 36899999999999999999999999999999999999999999876432 22233444555566888899989888754
Q ss_pred cccc-cccccccccCCCeeEEEEeeeeeeEEEEcCCC-chhHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcc
Q 006484 378 EEPI-GQILKRTELADGLILEKTSCPLGVLLIVFESR-PDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIP 455 (643)
Q Consensus 378 ~~~~-g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~~-P~~~~~~~~~AlaaGN~vi~Kps~~tp~t~~~~~~l~~~a~~ 455 (643)
.... +...+ .....+++++|+|||++|+||| |..+++++++||++||+||+|||+.+|.|+.++++++.+++.
T Consensus 80 ~~~~~~~~~~-----~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~aL~aGN~vilKps~~~p~~~~~l~~~~~~~~~ 154 (397)
T cd07077 80 VGHIQDVLLP-----DNGETYVRAFPIGVTMHILPSTNPLSGITSALRGIATRNQCIFRPHPSAPFTNRALALLFQAADA 154 (397)
T ss_pred cCcccceEec-----CCCceEEEEecceEEEEEeCCCCchHHHHHHHHHHHcCCcEEEEcCcchhhHHHHHHHHHHHHhh
Confidence 3222 22111 1234578999999999999995 755779999999999999999999999999999999998764
Q ss_pred cccCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHHhcC-CCEEEecCccceEEEcCCCCHHHHHHHHHhh
Q 006484 456 DTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK-IPVLGHADGICHVYVDKSANLDVAKNIVIDA 533 (643)
Q Consensus 456 ~alP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a~-~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~ 533 (643)
..+|++++|+|++ +.+.+..|..||+||+|+||||+.+++.+++.+. +|+++|+|||||+||++|||+|.|++.++++
T Consensus 155 ~g~p~~~v~~v~~~~~~~~~~l~~~~~vd~v~ftGs~~~~~~v~~~~~~~~~~~~~gg~~~~iv~~dad~~~a~~~~~~~ 234 (397)
T cd07077 155 AHGPKILVLYVPHPSDELAEELLSHPKIDLIVATGGRDAVDAAVKHSPHIPVIGFGAGNSPVVVDETADEERASGSVHDS 234 (397)
T ss_pred cCCCCceEEEecCCCHHHHHHHHcCCCCCEEEecCCHHHHHHHHHcCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHh
Confidence 3399999999984 5556776777899999999999999999988775 8999999999999999999999999999999
Q ss_pred cCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCCEEecCccccccc-cCCCCccccccccCceEEEEEeCCHH--
Q 006484 534 KIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLL-QIPETRLFHHEYNSMVCTVEIVDDVR-- 609 (643)
Q Consensus 534 ~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~~~~g~~~~~~~~-pv~~~~~~~eE~FgPvl~v~~~~~~d-- 609 (643)
+|.| | .|+|++|+|||+++| |+|+++|++++++.|.++..+... .++ |.+++++++||+||||++|++|+|+|
T Consensus 235 ~~~~-GQ~C~a~~~v~V~~~i~-d~~~~~l~~~~~~~G~~~~~g~~~-~~~~pt~~~~~~~~E~FgPvl~v~~~~~~~ea 311 (397)
T cd07077 235 KFFD-QNACASEQNLYVVDDVL-DPLYEEFKLKLVVEGLKVPQETKP-LSKETTPSFDDEALESMTPLECQFRVLDVISA 311 (397)
T ss_pred hccC-CccCCCCeEEEEehhhh-HHHHHHHHHHHHhcCcCcCCCcee-eEEeccCCCChhhhhhhCceeEEEEEcchHHH
Confidence 9999 6 999999999999999 799999999998866554322211 111 23468899999999999999999996
Q ss_pred --HHHHHHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 610 --AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 610 --eAi~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
+|++++|+++|||+++|||+|.+++.+|++++++
T Consensus 312 i~~ai~~~n~~~~gl~~~Ift~d~~~~~~~~~~l~~ 347 (397)
T cd07077 312 VENAWMIIESGGGPHTRCVYTHKINKVDDFVQYIDT 347 (397)
T ss_pred HHHHHHHHHhcCCCCceEEEeCCHHHHHHHHHhCCE
Confidence 5666889999999999999999999999999874
No 118
>cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins. ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate.
Probab=100.00 E-value=1.2e-58 Score=503.85 Aligned_cols=334 Identities=23% Similarity=0.268 Sum_probs=269.4
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhhHHHHHhhcChhHHHHHHHHHHHH
Q 006484 295 EMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRIL 374 (643)
Q Consensus 295 ~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~~ 374 (643)
+++++|++||+.|+++|..+|.++|++++++|++|+++|+++++.|++++. .++...++..+...++++++.++.+
T Consensus 2 ~~v~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~----~~~~~~Ev~~~~~~~~~~~~~~~~~ 77 (426)
T cd07087 2 ELVARLRETFLTGKTRSLEWRKAQLKALKRMLTENEEEIAAALYADLGKPP----AEAYLTEIAVVLGEIDHALKHLKKW 77 (426)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCH----HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 478999999999999999999999999999999999999999887765531 1222122222233344443333332
Q ss_pred hcccccccccccccccCCCeeEEEEeeeeeeEEEEcCCC-ch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHH
Q 006484 375 ADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESR-PD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITS 452 (643)
Q Consensus 375 ~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~~-P~-~~~~~~~~AlaaGN~vi~Kps~~tp~t~~~~~~l~~~ 452 (643)
.. +..........+...+.+++|+|||++|+||| |. ..+++++|||++||+||+|||+.+|.++.++++++.+
T Consensus 78 ~~-----~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlKps~~~p~~~~~l~~~~~~ 152 (426)
T cd07087 78 MK-----PRRVSVPLLLQPAKAYVIPEPLGVVLIIGPWNYPLQLALAPLIGAIAAGNTVVLKPSELAPATSALLAKLIPK 152 (426)
T ss_pred hC-----CcccCCccccCCCceEEEEecCcEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHH
Confidence 11 01010000011234577899999999999984 86 6679999999999999999999999999999999986
Q ss_pred hcccccCcCceEeecCcchHhHhhhCCCCccEEEeecCHHHHHHHHHhc---CCCEEEecCccceEEEcCCCCHHHHHHH
Q 006484 453 AIPDTVGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---KIPVLGHADGICHVYVDKSANLDVAKNI 529 (643)
Q Consensus 453 a~~~alP~g~v~~v~~~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a---~~p~~lelGG~~p~iV~~dAdl~~A~~~ 529 (643)
++|+|++|+++++.+.+..|..|| +++|+||||+.+|+.|++.+ .+|+++|+|||||+||++|||+|.|++.
T Consensus 153 ----~~P~gv~~vv~g~~~~~~~l~~~~-v~~V~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~ 227 (426)
T cd07087 153 ----YFDPEAVAVVEGGVEVATALLAEP-FDHIFFTGSPAVGKIVMEAAAKHLTPVTLELGGKSPCIVDKDANLEVAARR 227 (426)
T ss_pred ----hCCCCEEEEEeCCchHHHHHHhCC-CCEEEEeCChHHHHHHHHHHHhhCCceEEeccCCCceEecCCCCHHHHHHH
Confidence 499999999996444566566788 99999999999999998876 4899999999999999999999999999
Q ss_pred HHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCCE-----------------------------EecCccc
Q 006484 530 VIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVG-----------------------------LFGGPRA 579 (643)
Q Consensus 530 iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~~-----------------------------~~g~~~~ 579 (643)
+++++|.|+| .|+|++|+|||+++| |+|+++|++.++++... ++|+...
T Consensus 228 i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~L~~~~~~l~~~~~~~~~~~gpli~~~~~~~~~~~i~~a~v~~gg~~~ 306 (426)
T cd07087 228 IAWGKFLNAGQTCIAPDYVLVHESIK-DELIEELKKAIKEFYGEDPKESPDYGRIINERHFDRLASLLDDGKVVIGGQVD 306 (426)
T ss_pred HHHHHHhccCCccccCCEEEEcHHHH-HHHHHHHHHHHHHHcCCCCccCCCcCCCCCHHHHHHHHHHHhcceEEeCCccC
Confidence 9999999988 999999999999999 79999999998875210 1222211
Q ss_pred -cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 580 -SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 580 -~~-~~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
.+ ++ | | ++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++
T Consensus 307 ~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~ 379 (426)
T cd07087 307 KEERYIAPTILDDVSPDSPLMQEEIFGPILPILTYDDLDEAIEFINSRPKPLALYLFSEDKAVQERVLAETSS 379 (426)
T ss_pred CCCCEEeeEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHhcCCc
Confidence 12 33 5 2 3578999999999999999999999999999999999999999999999999998864
No 119
>cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like. Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD.
Probab=100.00 E-value=1.7e-58 Score=502.95 Aligned_cols=332 Identities=18% Similarity=0.206 Sum_probs=268.7
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhhHHHHHhhcChhHHHHHHHHHHHH
Q 006484 295 EMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRIL 374 (643)
Q Consensus 295 ~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~~ 374 (643)
+++++|++||+.|+++|..+|.++|++++++|++|.++|+++++.|++++.. ++.. .++..+++.++++
T Consensus 2 ~~~~~a~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~----ea~~-------~ev~~~~~~~~~~ 70 (433)
T cd07134 2 RVFAAQQAHALALRASTAAERIAKLKRLKKAILARREEIIAALAADFRKPAA----EVDL-------TEILPVLSEINHA 70 (433)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH----HHHH-------HHHHHHHHHHHHH
Confidence 5788999999999999999999999999999999999999999888765421 2211 1333344444433
Q ss_pred hccccc-cc-ccccccccCCCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHH
Q 006484 375 ADMEEP-IG-QILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVI 450 (643)
Q Consensus 375 ~~~~~~-~g-~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~~AlaaGN~vi~Kps~~tp~t~~~~~~l~ 450 (643)
+..... .+ ..........+...++.|+|+|||++|+|| +|. ..+++++|||++||+||+|||+.+|.++.++++++
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~~~~~ 150 (433)
T cd07134 71 IKHLKKWMKPKRVRTPLLLFGTKSKIRYEPKGVCLIISPWNYPFNLAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKII 150 (433)
T ss_pred HHHHHHHhCCcccCCccccCCCceEEEEecCCEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHH
Confidence 321110 01 111000001234457899999999999998 485 56789999999999999999999999999999999
Q ss_pred HHhcccccCcCceEeecCcchHhHhhhCCCCccEEEeecCHHHHHHHHHhcC---CCEEEecCccceEEEcCCCCHHHHH
Q 006484 451 TSAIPDTVGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK---IPVLGHADGICHVYVDKSANLDVAK 527 (643)
Q Consensus 451 ~~a~~~alP~g~v~~v~~~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a~---~p~~lelGG~~p~iV~~dAdl~~A~ 527 (643)
++ ++|+|++|+++++.+.+..|.+|| +++|+||||+.+|+.|++.+. +|+++|||||||+||++|||++.|+
T Consensus 151 ~~----a~p~g~v~~v~g~~~~~~~l~~~~-v~~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~~~iV~~dAD~~~aa 225 (433)
T cd07134 151 RE----AFDEDEVAVFEGDAEVAQALLELP-FDHIFFTGSPAVGKIVMAAAAKHLASVTLELGGKSPTIVDETADLKKAA 225 (433)
T ss_pred HH----hCCcCEEEEEeCChhHHHHHHhCC-CCEEEEECChHHHHHHHHHHHhcCCcEEEEccCCCcEEECCCCCHHHHH
Confidence 87 489999999996445666666787 999999999999999988763 8999999999999999999999999
Q ss_pred HHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC-----------------------------------
Q 006484 528 NIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV----------------------------------- 571 (643)
Q Consensus 528 ~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~----------------------------------- 571 (643)
+.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++..
T Consensus 226 ~~i~~~~~~~~GQ~C~a~~rv~V~~~v~-d~f~~~L~~~~~~~~~~~~~~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga 304 (433)
T cd07134 226 KKIAWGKFLNAGQTCIAPDYVFVHESVK-DAFVEHLKAEIEKFYGKDAARKASPDLARIVNDRHFDRLKGLLDDAVAKGA 304 (433)
T ss_pred HHHHHHhhcCcCCcccCCcEEEECHHHH-HHHHHHHHHHHHHHcCCCCCcCCCCccCCcCCHHHHHHHHHHHHHHHhCCC
Confidence 999999999998 999999999999999 7999999998886411
Q ss_pred EE-ecCccc-cc-cc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEecCHHHHHHHHHhc
Q 006484 572 GL-FGGPRA-SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQV 641 (643)
Q Consensus 572 ~~-~g~~~~-~~-~~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~~~~~~~~l 641 (643)
++ +|+... .+ ++ | | +++.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++
T Consensus 305 ~~~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l 384 (433)
T cd07134 305 KVEFGGQFDAAQRYIAPTVLTNVTPDMKIMQEEIFGPVLPIITYEDLDEVIEYINAKPKPLALYVFSKDKANVNKVLART 384 (433)
T ss_pred EEEeCCCcCCCCCEEeeEEEeCCCCccHHHhccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhC
Confidence 00 122111 12 22 5 2 35789999999999999999999999999999999999999999999999999998
Q ss_pred CC
Q 006484 642 DR 643 (643)
Q Consensus 642 ~~ 643 (643)
++
T Consensus 385 ~~ 386 (433)
T cd07134 385 SS 386 (433)
T ss_pred Cc
Confidence 74
No 120
>cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like. ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway.
Probab=100.00 E-value=2.1e-58 Score=503.15 Aligned_cols=332 Identities=14% Similarity=0.109 Sum_probs=272.5
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhhHHHHHhhcChhHHHHHHHHHHH
Q 006484 294 REMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRI 373 (643)
Q Consensus 294 ~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~ 373 (643)
++++++|++||+.|+++|..+|.++|++++++|++|.++|+.+++.|++++. +. ..++...+..+++
T Consensus 2 ~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-----~~--------~~ev~~~i~~~~~ 68 (442)
T cd07084 2 ERALLAADISTKAARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGKGW-----MF--------AENICGDQVQLRA 68 (442)
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHcCCch-----hh--------hhhhcchHHHHHH
Confidence 5789999999999999999999999999999999999999999887765432 11 1244445555555
Q ss_pred Hhcccccc---cccccccccCCCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHH
Q 006484 374 LADMEEPI---GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHK 448 (643)
Q Consensus 374 ~~~~~~~~---g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~~AlaaGN~vi~Kps~~tp~t~~~~~~ 448 (643)
++...+.. +..........+...+.+++|+|||++|+|| +|. +.++++++||++||+||+|||+.+|.++..+++
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~l~~ 148 (442)
T cd07084 69 RAFVIYSYRIPHEPGNHLGQGLKQQSHGYRWPYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQIMVR 148 (442)
T ss_pred HHHHHHhccccccccccCCCCccccceEEeecceeEEEEcCCccHhHHHHHHHHHHHHcCCeEEEECCCCchHHHHHHHH
Confidence 44322110 1100000000123457789999999999999 586 567899999999999999999999999999999
Q ss_pred HHHHhcccc-c-CcCceEeecCcchHhHhhhCCCCccEEEeecCHHHHHHHHHhcC-CCEEEecCccceEEEcCCC-CHH
Q 006484 449 VITSAIPDT-V-GEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK-IPVLGHADGICHVYVDKSA-NLD 524 (643)
Q Consensus 449 l~~~a~~~a-l-P~g~v~~v~~~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a~-~p~~lelGG~~p~iV~~dA-dl~ 524 (643)
++++ + + |+|++|+|++....+..|..||++++|+||||+++|+.|++.++ +|+++|||||||+||++|| |+|
T Consensus 149 ~l~~----ag~~P~g~~~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~a~~~~v~lElgG~~~~iV~~dadd~~ 224 (442)
T cd07084 149 LLHY----AGLLPPEDVTLINGDGKTMQALLLHPNPKMVLFTGSSRVAEKLALDAKQARIYLELAGFNWKVLGPDAQAVD 224 (442)
T ss_pred HHHH----hCCCCccceEEeeCCcHHHHHHHcCCCCCEEEEECCHHHHHHHHHhccCCcEEEeccCcCcEEECCChhhHH
Confidence 9998 5 6 99999999953336777778999999999999999999999886 8999999999999999999 699
Q ss_pred HHHHHHHhhcCCCCC-ccccceeEEEcCc-cCCchhHHHHHHHHHHcCC--------------------------EE-ec
Q 006484 525 VAKNIVIDAKIDYPA-ACNAMETLLVHKD-LACNGALNELVVELQHEGV--------------------------GL-FG 575 (643)
Q Consensus 525 ~A~~~iv~~~~~n~g-~C~a~~rv~V~~~-i~~~~f~~~l~~~~~~~~~--------------------------~~-~g 575 (643)
.|++.+++++|.|+| .|+|++|+|||++ +| |+|+++|++.++++.+ ++ +|
T Consensus 225 ~a~~~i~~~~~~~~GQ~C~a~~rl~V~~~~i~-~~f~~~l~~~~~~~~~g~~~~gpl~~~~~~~~i~~a~~~gga~~~~g 303 (442)
T cd07084 225 YVAWQCVQDMTACSGQKCTAQSMLFVPENWSK-TPLVEKLKALLARRKLEDLLLGPVQTFTTLAMIAHMENLLGSVLLFS 303 (442)
T ss_pred HHHHHHHHHHhcccCCeecCCcEEEEeCCccH-HHHHHHHHHHHHhcccCccccChhhhHHHHHHHHHHHhcCCcEEEeC
Confidence 999999999999998 9999999999999 99 7999999998877531 12 24
Q ss_pred Cccc--------cc-cc-c-C-----CCC---ccccccccCceEEEEEeCC--HHHHHHHHHccCCCceeEEEecCHHHH
Q 006484 576 GPRA--------SK-LL-Q-I-----PET---RLFHHEYNSMVCTVEIVDD--VRAAIDHIHQHGSAHTDCIVAEDQKVA 634 (643)
Q Consensus 576 ~~~~--------~~-~~-p-v-----~~~---~~~~eE~FgPvl~v~~~~~--~deAi~~aN~~~~GL~a~v~t~d~~~~ 634 (643)
+... .+ ++ | | ++| ++++||+||||++|++|+| ++|||+++|+++|||++||||+|.+++
T Consensus 304 g~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~ 383 (442)
T cd07084 304 GKELKNHSIPSIYGACVASALFVPIDEILKTYELVTEEIFGPFAIVVEYKKDQLALVLELLERMHGSLTAAIYSNDPIFL 383 (442)
T ss_pred CcccccCCCCCcCCcccCCeEEEecCcccccchHHheeccCceEEEEEeCCccHHHHHHHHHhCCCCeeEEEEeCCHHHH
Confidence 3321 13 33 5 2 244 8899999999999999999 999999999999999999999999999
Q ss_pred HHHHHhc-CC
Q 006484 635 ETFLCQV-DR 643 (643)
Q Consensus 635 ~~~~~~l-~~ 643 (643)
+++++++ ++
T Consensus 384 ~~~~~~l~~~ 393 (442)
T cd07084 384 QELIGNLWVA 393 (442)
T ss_pred HHHHHHHHhc
Confidence 9999998 53
No 121
>cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like. Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes.
Probab=100.00 E-value=1.1e-57 Score=503.20 Aligned_cols=343 Identities=15% Similarity=0.134 Sum_probs=273.6
Q ss_pred HhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhhHHHHHhhcChhHHHHHHHH
Q 006484 291 VGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKS 370 (643)
Q Consensus 291 ~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~ 370 (643)
.++++++++|++||+.|+++++.+|.++|++++++|++++++|+.+++.|+|+++. ++.. .....+++..++.
T Consensus 84 adv~~ai~aA~~A~~~W~~~~~~~R~~il~~~a~~l~~~~~ela~a~~~e~Gk~~~----~a~q---a~~~~evd~a~e~ 156 (549)
T cd07127 84 CDPDALLAAARAAMPGWRDAGARARAGVCLEILQRLNARSFEMAHAVMHTTGQAFM----MAFQ---AGGPHAQDRGLEA 156 (549)
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHCCCHH----HHHh---cccHHHHHHHHHH
Confidence 38999999999999999999999999999999999999999999998887765542 1110 0000145555555
Q ss_pred HHHHhccccc-ccccc---cccc-cCCCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHH
Q 006484 371 IRILADMEEP-IGQIL---KRTE-LADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSN 443 (643)
Q Consensus 371 ~~~~~~~~~~-~g~~~---~~~~-~~~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~~AlaaGN~vi~Kps~~tp~t~ 443 (643)
++++.+.... .+... +... .+.....+..++|+|||++|.|| ||. .++.++++||++||+||+|||+.+|+++
T Consensus 157 ~~~a~~~~~~~~~~~~w~~~~~~~~~l~~~k~~~~~P~GVv~vI~p~nfP~~~~~~~i~~ALaaGN~VVvKPs~~a~ls~ 236 (549)
T cd07127 157 VAYAWREMSRIPPTAEWEKPQGKHDPLAMEKTFTVVPRGVALVIGCSTFPTWNGYPGLFASLATGNPVIVKPHPAAILPL 236 (549)
T ss_pred HHHHHHHHHhccccccccCCCCCcccccccceeEEecccEEEEEeCcCChHHHHHHHHHHHHhcCCeEEEECCcccchhH
Confidence 5554432211 11100 0000 00001113468999999999998 585 4578899999999999999999999999
Q ss_pred HHHHHHHHHhcccc-cCcCceEeecC--cchHhHhhhCCCCccEEEeecCHHHHHHHHHhcC-CCEEEecCccceEEEcC
Q 006484 444 AILHKVITSAIPDT-VGEKLIGLVTS--REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK-IPVLGHADGICHVYVDK 519 (643)
Q Consensus 444 ~~~~~l~~~a~~~a-lP~g~v~~v~~--~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a~-~p~~lelGG~~p~iV~~ 519 (643)
.++.+++.+++.++ ||+|+||+|++ +.++++.|..||+|++|+||||+.+|+.|++.+. +|+++|||||||+||++
T Consensus 237 ~~~~~~i~~~l~eAGlP~gvv~~v~g~~~~~~~~~L~~~p~v~~I~FTGS~~~G~~i~~~a~~~~v~~ElGGkn~~IV~~ 316 (549)
T cd07127 237 AITVQVAREVLAEAGFDPNLVTLAADTPEEPIAQTLATRPEVRIIDFTGSNAFGDWLEANARQAQVYTEKAGVNTVVVDS 316 (549)
T ss_pred HHHHHHHHHHHHHcCcCcccEEEEeCCCcHHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhccCcEEEecCCcCeEEECC
Confidence 88887777777789 99999999984 3467777888999999999999999999998874 89999999999999999
Q ss_pred CCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCc---------cCCchhHHHHHHHHHHcC-------------------
Q 006484 520 SANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKD---------LACNGALNELVVELQHEG------------------- 570 (643)
Q Consensus 520 dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~---------i~~~~f~~~l~~~~~~~~------------------- 570 (643)
|||++.+++.+++|+|.|+| .|++++|+|||++ +| |+|+++|+++++++-
T Consensus 317 dADl~~aa~~i~~~~f~~sGQ~C~a~~ri~V~~s~i~~~~g~~i~-d~f~~~L~~~~~~l~Gdp~~~~~~~Gpli~~~~~ 395 (549)
T cd07127 317 TDDLKAMLRNLAFSLSLYSGQMCTTPQNIYVPRDGIQTDDGRKSF-DEVAADLAAAIDGLLADPARAAALLGAIQSPDTL 395 (549)
T ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCEEEEECCccccccchhHH-HHHHHHHHHHHHHhcCCccccccccCCcCCHHHH
Confidence 99999999999999999998 9999999999999 89 799999999887651
Q ss_pred ----------CEEecCccc-----cc-cc--c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHHccC--C-Cce
Q 006484 571 ----------VGLFGGPRA-----SK-LL--Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHG--S-AHT 623 (643)
Q Consensus 571 ----------~~~~g~~~~-----~~-~~--p-v-----~~~~~~~eE~FgPvl~v~~~~~~deAi~~aN~~~--~-GL~ 623 (643)
.-++|+... .+ ++ | | ++|++++||+||||++|++|+|.||||+++|++. | ||+
T Consensus 396 ~ri~~a~~~g~vl~gg~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V~~~~d~~eai~~an~~~~~~ggLt 475 (549)
T cd07127 396 ARIAEARQLGEVLLASEAVAHPEFPDARVRTPLLLKLDASDEAAYAEERFGPIAFVVATDSTDHSIELARESVREHGAMT 475 (549)
T ss_pred HHHHHHHhCCCEEEcCCcCCCcCCCCceEEeCEEEEeCCCCCHHHcCCCcCceEEEEEeCCHHHHHHHHHhcccCCCCce
Confidence 012233211 12 22 6 2 3589999999999999999999999999999984 4 699
Q ss_pred eEEEecCHHHHHHHHHhc
Q 006484 624 DCIVAEDQKVAETFLCQV 641 (643)
Q Consensus 624 a~v~t~d~~~~~~~~~~l 641 (643)
+||||+|.+.++++.+++
T Consensus 476 ~sVfs~D~~~~~~~~~~~ 493 (549)
T cd07127 476 VGVYSTDPEVVERVQEAA 493 (549)
T ss_pred EEEEcCCHHHHHHHHHHH
Confidence 999999999999998874
No 122
>PRK10090 aldehyde dehydrogenase A; Provisional
Probab=100.00 E-value=3.3e-58 Score=495.39 Aligned_cols=306 Identities=19% Similarity=0.210 Sum_probs=255.3
Q ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhhHHHHHhhcChhHHHHHHHHHHHHhcccccc-cccccccccCCCeeEE
Q 006484 319 LLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILE 397 (643)
Q Consensus 319 L~~~a~~l~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~ 397 (643)
|++++++|++|+++|+++++.|++++. .++ ..|+..+++.+++++++.+.. +..... ...+...+
T Consensus 1 L~~~a~~l~~~~~el~~~~~~e~Gk~~----~ea--------~~Ev~~~~~~~~~~a~~~~~~~~~~~~~--~~~~~~~~ 66 (409)
T PRK10090 1 LRKIAAGIRERASEISALIVEEGGKIQ----QLA--------EVEVAFTADYIDYMAEWARRYEGEIIQS--DRPGENIL 66 (409)
T ss_pred CHHHHHHHHHCHHHHHHHHHHhcCCCH----HHH--------HHHHHHHHHHHHHHHHHHHHhcCcccCC--CCCCceeE
Confidence 578999999999999999887765432 222 235666667777766554322 222211 11233567
Q ss_pred EEeeeeeeEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecC-cchHh
Q 006484 398 KTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIP 473 (643)
Q Consensus 398 ~~~~PlGvv~~I~p~-~P~-~~~~~~~~AlaaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~-~~~~~ 473 (643)
++++|+|||++|+|| ||. +.++++++||++||+||+|||+.+|.|++.+++++.+ + ||+|++|+|++ +.+.+
T Consensus 67 ~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~----aglP~gv~~~v~g~~~~~~ 142 (409)
T PRK10090 67 LFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDE----IGLPKGVFNLVLGRGETVG 142 (409)
T ss_pred EEEecccEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHH----cCCCcccEEEEeCCChhHH
Confidence 889999999999999 485 5679999999999999999999999999999999987 6 99999999996 56678
Q ss_pred HhhhCCCCccEEEeecCHHHHHHHHHhc---CCCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEE
Q 006484 474 DLLKLDDVIDLVIPRGSNKLVSQIKEST---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLV 549 (643)
Q Consensus 474 ~~l~~~~~v~~i~fTGs~~~g~~i~~~a---~~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V 549 (643)
+.|..||+||+|+||||+.+|+.|++.+ .||+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|++|+||
T Consensus 143 ~~l~~~~~v~~V~ftGs~~~g~~v~~~aa~~~~~~~lElgGk~p~iV~~dADld~aa~~iv~~~f~~~GQ~C~a~~rv~V 222 (409)
T PRK10090 143 QELAGNPKVAMVSMTGSVSAGEKIMAAAAKNITKVCLELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERVYV 222 (409)
T ss_pred HHHhcCCCcCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEE
Confidence 8888899999999999999999998876 38999999999999999999999999999999999988 9999999999
Q ss_pred cCccCCchhHHHHHHHHHHcCC-----------------------------------EE-ecCccc--cc-cc-c-C---
Q 006484 550 HKDLACNGALNELVVELQHEGV-----------------------------------GL-FGGPRA--SK-LL-Q-I--- 585 (643)
Q Consensus 550 ~~~i~~~~f~~~l~~~~~~~~~-----------------------------------~~-~g~~~~--~~-~~-p-v--- 585 (643)
|+++| |+|+++|+++++++.+ ++ .|+... .+ ++ | |
T Consensus 223 ~~~i~-~~f~~~l~~~~~~~~~G~p~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~ 301 (409)
T PRK10090 223 QKGIY-DQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTLLLD 301 (409)
T ss_pred cHHHH-HHHHHHHHHHHHhcCCCCCCCcccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEecEEEeC
Confidence 99999 7999999999987632 01 122211 12 23 5 2
Q ss_pred --CCCccccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 586 --PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 586 --~~~~~~~eE~FgPvl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++
T Consensus 302 v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~ 361 (409)
T PRK10090 302 VRQEMSIMHEETFGPVLPVVAFDTLEEAIAMANDSDYGLTSSIYTQNLNVAMKAIKGLKF 361 (409)
T ss_pred CCCCCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCc
Confidence 3589999999999999999999999999999999999999999999999999999875
No 123
>PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=100.00 E-value=2.2e-57 Score=536.46 Aligned_cols=340 Identities=18% Similarity=0.202 Sum_probs=291.3
Q ss_pred HHHHc-CCceeeEEecCccccccHHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Q 006484 268 IKVLE-GKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 346 (643)
Q Consensus 268 ~~~~~-g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~ 346 (643)
.+|.+ ++.+|++..++ .+++++++++|++||+.|+.+|.++|.++|++++++|+++.++|++++..|.+++.
T Consensus 572 ~nP~~~~~~vg~v~~a~------~~~v~~Av~aA~~A~~~W~~~~~~~Ra~iL~raAdll~~~~~eL~~l~~~E~GKt~- 644 (1208)
T PRK11905 572 LNPADHDDVVGTVTEAS------AEDVERALAAAQAAFPEWSATPAAERAAILERAADLMEAHMPELFALAVREAGKTL- 644 (1208)
T ss_pred ECCCCCCceEEEEeCCC------HHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCH-
Confidence 55666 67788888887 89999999999999999999999999999999999999999999998887665432
Q ss_pred hchhhHHHHHhhcChhHHHHHHHHHHHHhcccccccccccccccCCCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHHHHH
Q 006484 347 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 424 (643)
Q Consensus 347 ~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~~A 424 (643)
.++ ..++..+++.+++++...+.. . ....++|+|||++|+|| ||. +...++++|
T Consensus 645 ---~ea--------~~Ev~eaid~lr~ya~~a~~~----~---------~~~~~~P~GVv~~IsPwNfPlai~~g~i~aA 700 (1208)
T PRK11905 645 ---ANA--------IAEVREAVDFLRYYAAQARRL----L---------NGPGHKPLGPVVCISPWNFPLAIFTGQIAAA 700 (1208)
T ss_pred ---HHH--------HHHHHHHHHHHHHHHHHHHHh----c---------CCceecCccEEEEEcCCcCHHHHHHHHHHHH
Confidence 222 347888899999987543211 0 01357899999999999 585 567899999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHHhc-
Q 006484 425 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 501 (643)
Q Consensus 425 laaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a- 501 (643)
|++||+||+|||++||+++..+.+++++ + +|+|++|+|+| ++++++.|..||+|++|+||||+.+|+.|++.+
T Consensus 701 LaaGN~VV~KPse~tpl~a~~l~~ll~e----AGlP~gvl~lV~G~g~~vg~~Lv~~p~v~~V~FTGSt~vg~~I~~~~A 776 (1208)
T PRK11905 701 LVAGNTVLAKPAEQTPLIAARAVRLLHE----AGVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTLA 776 (1208)
T ss_pred HHcCCEEEEeCCcccHHHHHHHHHHHHH----cCCCcccEEEeeCCchHHHHHHHcCCCcCEEEEeCCHHHHHHHHHHHH
Confidence 9999999999999999999999999987 7 99999999995 556788888899999999999999999998764
Q ss_pred -----CCCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCCE---
Q 006484 502 -----KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVG--- 572 (643)
Q Consensus 502 -----~~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~~--- 572 (643)
.+|+++|+|||||+||++|||+|+|++.+++|+|.|+| .|+|++|+|||+++| |+|+++|+++++++.++
T Consensus 777 ~~~~~~~pli~ElGGkN~~IV~~dAdle~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~-d~f~e~L~~~~~~l~vGdP~ 855 (1208)
T PRK11905 777 KRSGPPVPLIAETGGQNAMIVDSSALPEQVVADVIASAFDSAGQRCSALRVLCLQEDVA-DRVLTMLKGAMDELRIGDPW 855 (1208)
T ss_pred hhcCCCCeEEEecCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEehhHH-HHHHHHHHHHHHHhcCCCch
Confidence 27999999999999999999999999999999999998 999999999999999 79999999999887431
Q ss_pred -------------------------------EecCcc----ccccc--c-C---CCCccccccccCceEEEEEeC--CHH
Q 006484 573 -------------------------------LFGGPR----ASKLL--Q-I---PETRLFHHEYNSMVCTVEIVD--DVR 609 (643)
Q Consensus 573 -------------------------------~~g~~~----~~~~~--p-v---~~~~~~~eE~FgPvl~v~~~~--~~d 609 (643)
+.++.. ..++| | | +++.+++||+||||++|++|+ |+|
T Consensus 856 d~~t~~GPvId~~a~~~i~~~I~~a~~~G~~l~~g~~~~~~~~G~fv~PTVl~~~~~~~~~eEiFGPVL~V~~y~~~dld 935 (1208)
T PRK11905 856 RLSTDVGPVIDAEAQANIEAHIEAMRAAGRLVHQLPLPAETEKGTFVAPTLIEIDSISDLEREVFGPVLHVVRFKADELD 935 (1208)
T ss_pred hccCCccCccCHHHHHHHHHHHHHHHHCCCEEEEccCCCCCCCCeEEeeEEEecCChHHhcCCccCceEEEEEeCCCCHH
Confidence 111100 11223 5 3 457889999999999999997 799
Q ss_pred HHHHHHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 610 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 610 eAi~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
|||+++|+++|||+++|||+|.+.+.++++++++
T Consensus 936 eaI~~iN~t~yGLt~~I~S~d~~~~~~~~~~l~a 969 (1208)
T PRK11905 936 RVIDDINATGYGLTFGLHSRIDETIAHVTSRIRA 969 (1208)
T ss_pred HHHHHHhcCCCCceEEEEcCCHHHHHHHHHhCCE
Confidence 9999999999999999999999999999998864
No 124
>PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional
Probab=100.00 E-value=2.8e-56 Score=522.12 Aligned_cols=336 Identities=17% Similarity=0.217 Sum_probs=271.4
Q ss_pred HHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhhHHHHHhhcChhHHHHHHH
Q 006484 290 QVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAK 369 (643)
Q Consensus 290 ~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~ 369 (643)
.+++++++++|++||+.|+++|.++|.++|++++++|++|+++|+++++.|.|++. .++.. .+...+..
T Consensus 11 ~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~EtGk~~----~e~~~-------~~~~~~~~ 79 (862)
T PRK13805 11 VAELDALVEKAKKAQEEFATFTQEQVDKIVRAAALAALDARIPLAKMAVEETGRGV----VEDKV-------IKNHFASE 79 (862)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCh----HHHHH-------HHHHHHHH
Confidence 67999999999999999999999999999999999999999999999887765542 22211 12334444
Q ss_pred HHHHHhcccccccccccccccCCCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHH
Q 006484 370 SIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILH 447 (643)
Q Consensus 370 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~~AlaaGN~vi~Kps~~tp~t~~~~~ 447 (643)
.+.++....+..|. +. .+.+...+++++|+|||++|+|| ||. +.++++++||++||+||+|||+.||.|+.+++
T Consensus 80 ~~~~~~~~~~~~g~-~~---~~~~~~~~~~~~P~GVv~~I~pwn~P~~~~~~~~~~ALaaGN~vVlKps~~a~~t~~~~~ 155 (862)
T PRK13805 80 YIYNSYKDEKTVGV-IE---EDDEFGIIEIAEPVGVIAGITPTTNPTSTAIFKALIALKTRNPIIFSFHPRAQKSSIAAA 155 (862)
T ss_pred HHHHHhcCCCcccc-cC---cCCCCCeEEEeecceEEEEEeCCCChhHHHHHHHHHHHHhCCcEEEECCcchHHHHHHHH
Confidence 44444322222232 11 11234567889999999999999 596 45689999999999999999999999999999
Q ss_pred HHHHHhcccc-cCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHHhcCCCEEEecCccceEEEcCCCCHHH
Q 006484 448 KVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDV 525 (643)
Q Consensus 448 ~l~~~a~~~a-lP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a~~p~~lelGG~~p~iV~~dAdl~~ 525 (643)
+++++++.++ +|+|++|+|++ +.+.++.|..||+||+|+||||+.+++.++ ...+|+++|+|||||+||++|||+|+
T Consensus 156 ~l~~~~l~~aG~p~g~v~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v~~~a~-~~~~pv~~e~gGk~p~iV~~dADl~~ 234 (862)
T PRK13805 156 KIVLDAAVAAGAPKDIIQWIEEPSVELTNALMNHPGIALILATGGPGMVKAAY-SSGKPALGVGAGNVPAYIDKTADIKR 234 (862)
T ss_pred HHHHHHHHHcCcCcccEEEecCCCHHHHHHHHcCCCccEEEecCCHHHHHHHH-hcCCCeEEECCCCCeEEEeCCCCHHH
Confidence 9999988889 99999999995 555666666788999999999999988763 44799999999999999999999999
Q ss_pred HHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHc-------------------CC--EEecCccc----
Q 006484 526 AKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHE-------------------GV--GLFGGPRA---- 579 (643)
Q Consensus 526 A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~-------------------~~--~~~g~~~~---- 579 (643)
|++.+++|+|.|+| +|+|++|+|||++|| |+|+++|+++...+ +. .++|+...
T Consensus 235 Aa~~i~~~k~~n~GQ~C~a~~~v~V~~~i~-d~f~~~l~~~g~~l~~~~~~~~v~~~i~~a~~~~~~~~~~g~~~~~~~~ 313 (862)
T PRK13805 235 AVNDILLSKTFDNGMICASEQAVIVDDEIY-DEVKEEFASHGAYFLNKKELKKLEKFIFGKENGALNADIVGQSAYKIAE 313 (862)
T ss_pred HHHHHHHhhhccCCCccCCCceEEEehhhH-HHHHHHHHHhCCeeCCHHHHHHHHHHHhhccCCCcCccccCCCHHHHHH
Confidence 99999999999988 999999999999999 79999987642100 01 12333210
Q ss_pred -cc-cc-c--------C----CCCccccccccCceEEEEEeCCHHHHHHHHHc----cCCCceeEEEecCHHHHHHHHHh
Q 006484 580 -SK-LL-Q--------I----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQ----HGSAHTDCIVAEDQKVAETFLCQ 640 (643)
Q Consensus 580 -~~-~~-p--------v----~~~~~~~eE~FgPvl~v~~~~~~deAi~~aN~----~~~GL~a~v~t~d~~~~~~~~~~ 640 (643)
.+ ++ | + +++++++ |+||||++|++|+|+||||+++|+ ++|||+++|||+|.+++++|+++
T Consensus 314 ~~G~~~~p~~~~~i~~l~~v~~~~~~~~-E~fgPVl~v~~~~~~deAi~~~n~~~~~~~~gl~~~i~t~d~~~~~~~~~~ 392 (862)
T PRK13805 314 MAGFKVPEDTKILIAEVKGVGESEPLSH-EKLSPVLAMYKAKDFEDAVEKAEKLVEFGGLGHTAVIYTNDDELIKEFGLR 392 (862)
T ss_pred HcCCCCCCCCeEEEEecCCCCCCCcchh-cccCcEEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHhh
Confidence 01 11 2 2 2456665 899999999999999999999998 58999999999999999999999
Q ss_pred cCC
Q 006484 641 VDR 643 (643)
Q Consensus 641 l~~ 643 (643)
+++
T Consensus 393 l~~ 395 (862)
T PRK13805 393 MKA 395 (862)
T ss_pred CCc
Confidence 875
No 125
>KOG2454 consensus Betaine aldehyde dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=3.4e-56 Score=441.25 Aligned_cols=359 Identities=17% Similarity=0.187 Sum_probs=299.0
Q ss_pred HHHHcCCceeeEEecCccccccHHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Q 006484 268 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 347 (643)
Q Consensus 268 ~~~~~g~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~ 347 (643)
..+.+|+-.|.+..-+ +.++++-+..|++||++|++.+..+|+++|+.+.+.+.+|.|.|++..++|.+++
T Consensus 69 ycPatg~yLG~fp~~~------~tdide~v~la~kAQktW~~ssF~~Rr~fL~~L~~yIi~nQdliaevacrDtGKT--- 139 (583)
T KOG2454|consen 69 YCPATGKYLGYFPALS------PTDIDERVTLARKAQKTWAQSSFKLRRQFLRILLKYIIENQDLIAEVACRDTGKT--- 139 (583)
T ss_pred ecCCCcceeeecccCC------hhhHHHHHHHHHHHHhhhhhccHHHHHHHHHHHHHHHhhchhheeeeeecccCch---
Confidence 3456777778876666 7899999999999999999999999999999999999999999999888887653
Q ss_pred chhhHHHHHhhcChhHHHHHHHHHHHHhccc-ccccccccccccCCCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHHHHH
Q 006484 348 GYAKSLVSRLALKPGKISSLAKSIRILADME-EPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 424 (643)
Q Consensus 348 g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~~A 424 (643)
+.++...++..+.+.|.+++..=+++.+.. +|.+.. .-....++.++|+||+++|.|| ||. ..+.++..|
T Consensus 140 -mvDAs~GEIlvTlEKI~Wtl~~Ger~L~P~~Rpn~~~------~~yKg~~v~yePLGVI~aiVsWNYPfHN~lgPiiaA 212 (583)
T KOG2454|consen 140 -MVDASLGEILVTLEKITWTLSEGERWLKPESRPNGRA------MLYKGSRVEYEPLGVIGAIVSWNYPFHNILGPIIAA 212 (583)
T ss_pred -hhhhhHhHHHHHHHHhhhhhhcchhhcCCcCCCchhh------eeeccceEEEeecceEEEeeecCCchhhhhhHHHHH
Confidence 334444555556666666655444332211 111111 1112246789999999999999 586 456889999
Q ss_pred HHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecCcchHhHhhhCCCCccEEEeecCHHHHHHHHHhcC-
Q 006484 425 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK- 502 (643)
Q Consensus 425 laaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a~- 502 (643)
|-+||++|+|.||++.+++....++++.+|... -|++++|++++-+++++.|.+|+.|++|.|.||..+++.|++.|+
T Consensus 213 lFsGNaIVvK~SE~~~WS~~fy~e~ir~~L~a~g~~p~LVq~itclpd~a~~ltSh~g~khitFiGSqpvak~i~~~AAk 292 (583)
T KOG2454|consen 213 LFSGNAIVVKVSEHASWSGCFYFEIIRAALAAVGAPPNLVQVITCLPDTAEALTSHSGVKHITFIGSQPVAKMIMRNAAK 292 (583)
T ss_pred HhcCCeEEEEeecceeeehhhHHHHHHHHHHHcCCCcchhheeecCcchHhHhhcCCCcceEEEecCcHHHHHHHHhhhh
Confidence 999999999999999999999999999999877 999999999976678888999999999999999999999998873
Q ss_pred --CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC--------
Q 006484 503 --IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 571 (643)
Q Consensus 503 --~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~-------- 571 (643)
+|+++|||||+|+||++|||++..+..+++|-|+.+| .|+.++|++||+++| |.|+..|-.+++....
T Consensus 293 ~LTPv~lELGGKDafIi~dda~l~~v~si~mRGtfQSsGQNCiGiER~iv~k~~Y-d~~i~~l~~rv~s~r~G~~~~~~v 371 (583)
T KOG2454|consen 293 TLTPVTLELGGKDAFIICDDADLSHVASIAMRGTFQSSGQNCIGIERFIVHKDIY-DAFIGQLTKRVKSVRAGPPLTGRV 371 (583)
T ss_pred hcCcEEEeecCcccEEEeccccHHHHHHHHHhhhhhhcCCcccceeEEEEecchH-HHHHHHHHHHHHHHHcCCCccCcc
Confidence 9999999999999999999999999999999999988 999999999999999 7999999888775421
Q ss_pred --------------------------EE-ecCccc-------cccc-c---C---CCCccccccccCceEEEEEeCCHHH
Q 006484 572 --------------------------GL-FGGPRA-------SKLL-Q---I---PETRLFHHEYNSMVCTVEIVDDVRA 610 (643)
Q Consensus 572 --------------------------~~-~g~~~~-------~~~~-p---v---~~~~~~~eE~FgPvl~v~~~~~~de 610 (643)
++ .||.+. ..+| | | ++|.+++||.||||++++++++.|+
T Consensus 372 DMGAm~s~nrfdhLesLv~DAv~KGArl~~gGsrF~Hpkyp~g~YF~PTlLvdvt~eMKIaqeE~FgPI~~im~ak~~eh 451 (583)
T KOG2454|consen 372 DMGAMCSQNRFDHLESLVNDAVDKGARLAVGGSRFGHPKYPVGQYFPPTLLVDVTHEMKIAQEEAFGPIMPIMQAKTDEH 451 (583)
T ss_pred chhhhhhccchHHHHHHHHHHHhhcchhhhcccccCCCCCCcccccCCeEEEecCchhhhHhhhccccchhhhhcCChHH
Confidence 11 122211 1133 4 2 4699999999999999999999999
Q ss_pred HHHHHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 611 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 611 Ai~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
+|+++|+++|||+++||+.|..++.++++++++
T Consensus 452 ~i~lAN~s~fgLG~sVFg~dk~~c~y~a~~lqt 484 (583)
T KOG2454|consen 452 VIKLANDSRFGLGCSVFGGDKHRCKYIASQLQT 484 (583)
T ss_pred HHhhccCCcccccceeccccHHHHHHHHhhhhc
Confidence 999999999999999999999999999999874
No 126
>cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family. The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer
Probab=100.00 E-value=5.9e-52 Score=454.57 Aligned_cols=330 Identities=20% Similarity=0.252 Sum_probs=272.8
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhhHHHHHhhcChhHHHHHHHHHHHH
Q 006484 295 EMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRIL 374 (643)
Q Consensus 295 ~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~~ 374 (643)
+++++|++||+.|+++|.++|.++|+++++.|.++.++|+++++.|++++.. +. ..++..+++.++++
T Consensus 2 ~av~~a~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~etG~~~~----~~--------~~ei~~~i~~l~~~ 69 (432)
T cd07078 2 AAVAAARAAFKAWAALPPAERAAILRKLADLLEERREELAALETLETGKPIE----EA--------LGEVARAADTFRYY 69 (432)
T ss_pred HHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH----HH--------HHHHHHHHHHHHHH
Confidence 6889999999999999999999999999999999999999998877654321 11 12455555555554
Q ss_pred hcccccc-cccccccccCCCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHH
Q 006484 375 ADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVIT 451 (643)
Q Consensus 375 ~~~~~~~-g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~~AlaaGN~vi~Kps~~tp~t~~~~~~l~~ 451 (643)
+...+.. +.... ....+...+.+++|+|||++|+|| +|. ..++.+++||++||+||+|||+.+|.++..+.++++
T Consensus 70 ~~~~~~~~~~~~~--~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~vilkps~~~~~~~~~l~~~l~ 147 (432)
T cd07078 70 AGLARRLHGEVIP--SPDPGELAIVRREPLGVVGAITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALLLAELLA 147 (432)
T ss_pred HHHHHHhcCcccc--ccCCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHH
Confidence 4322221 11111 112344567789999999999998 585 567899999999999999999999999999999998
Q ss_pred Hhcccc-cCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHHhcC---CCEEEecCccceEEEcCCCCHHHH
Q 006484 452 SAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK---IPVLGHADGICHVYVDKSANLDVA 526 (643)
Q Consensus 452 ~a~~~a-lP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a~---~p~~lelGG~~p~iV~~dAdl~~A 526 (643)
+ + +|+|+++++++ .+.....|..|+++|+|.||||+.+|+.+++.+. +|+++|+|||||+||++|||++.|
T Consensus 148 ~----ag~p~~~~~~~~~~~~~~~~~l~~~~~i~~v~ftGs~~~~~~v~~~a~~~~~~~~~e~gg~~~~iV~~~ad~~~a 223 (432)
T cd07078 148 E----AGLPPGVLNVVTGDGDEVGAALASHPRVDKISFTGSTAVGKAIMRAAAENLKRVTLELGGKSPLIVFDDADLDAA 223 (432)
T ss_pred H----cCCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhccCcEEEecCCCCeeEECCCCCHHHH
Confidence 7 6 89999999995 4446666667889999999999999999988774 899999999999999999999999
Q ss_pred HHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCC----------------------------------
Q 006484 527 KNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV---------------------------------- 571 (643)
Q Consensus 527 ~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~---------------------------------- 571 (643)
++.+++++|.|+| .|++++++|||+++| |+|+++|+++++++..
T Consensus 224 a~~i~~~~~~~~Gq~C~a~~~i~v~~~~~-~~~~~~L~~~l~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~ 302 (432)
T cd07078 224 VKGAVFGAFGNAGQVCTAASRLLVHESIY-DEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKAEGA 302 (432)
T ss_pred HHHHHHHHHhccCCCccCCceEEEcHHHH-HHHHHHHHHHHHccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCC
Confidence 9999999999988 999999999999999 7999999999876532
Q ss_pred EE-ecCcccc---c-cc-c-C-----CCCccccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEecCHHHHHHHHH
Q 006484 572 GL-FGGPRAS---K-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLC 639 (643)
Q Consensus 572 ~~-~g~~~~~---~-~~-p-v-----~~~~~~~eE~FgPvl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~~~~~~~ 639 (643)
++ .|++... + ++ | | +++.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++
T Consensus 303 ~~~~gg~~~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~~l~~~i~t~d~~~~~~~~~ 382 (432)
T cd07078 303 KLLCGGKRLEGGKGYFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEAIELANDTEYGLAAGVFTRDLERALRVAE 382 (432)
T ss_pred EEEeCCccCCCCCCcEEccEEEecCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHH
Confidence 12 2333221 2 33 5 2 346899999999999999999999999999999999999999999999999999
Q ss_pred hcCC
Q 006484 640 QVDR 643 (643)
Q Consensus 640 ~l~~ 643 (643)
++++
T Consensus 383 ~~~~ 386 (432)
T cd07078 383 RLEA 386 (432)
T ss_pred hcCc
Confidence 8764
No 127
>cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily. The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri
Probab=100.00 E-value=1.2e-50 Score=434.63 Aligned_cols=310 Identities=21% Similarity=0.242 Sum_probs=260.3
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhhHHHHHhhcChhHHHHHHHHHHHHhccc
Q 006484 299 AARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADME 378 (643)
Q Consensus 299 ~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 378 (643)
+|++||++|+++|.++|.++|+++++.|.++.++|+++++.|++++.. ++ ..++...++.++++++..
T Consensus 2 ~a~~a~~~w~~~~~~~R~~~l~~l~~~l~~~~~~l~~~~~~e~Gk~~~----~~--------~~ev~~~~~~l~~~~~~~ 69 (367)
T cd06534 2 AARAAFKAWAALPPAERAAILRKIADLLEERREELAALETLETGKPIE----EA--------LGEVARAIDTFRYAAGLA 69 (367)
T ss_pred hHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH----HH--------HHHHHHHHHHHHHHHHHH
Confidence 689999999999999999999999999999999999988877654321 11 224555555555544322
Q ss_pred ccc-cccccccccCCCeeEEEEeeeeeeEEEEcCCC-chh-HHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcc
Q 006484 379 EPI-GQILKRTELADGLILEKTSCPLGVLLIVFESR-PDA-LVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIP 455 (643)
Q Consensus 379 ~~~-g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~~-P~~-~~~~~~~AlaaGN~vi~Kps~~tp~t~~~~~~l~~~a~~ 455 (643)
+.. +.... ....+...+.+++|+|||++|+||| |.+ .++.+++||++||+||+|||+.+|.++..+++++.+
T Consensus 70 ~~~~~~~~~--~~~~~~~~~~~~~p~Gvv~~i~p~n~p~~~~~~~~~~aL~~GN~vilk~s~~~~~~~~~l~~~l~~--- 144 (367)
T cd06534 70 DKLGGPELP--SPDPGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALALAELLQE--- 144 (367)
T ss_pred HHhcCCccc--ccCCCceeEEEEEeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHh---
Confidence 211 11111 1123455678899999999999985 765 689999999999999999999999999999999987
Q ss_pred cc-cCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHHhcC---CCEEEecCccceEEEcCCCCHHHHHHHH
Q 006484 456 DT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK---IPVLGHADGICHVYVDKSANLDVAKNIV 530 (643)
Q Consensus 456 ~a-lP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a~---~p~~lelGG~~p~iV~~dAdl~~A~~~i 530 (643)
+ +|+|+++++++ .++..+.|..|+++|+|+||||+++++.+.+.+. +|+++|+||+||+||++|||++.|++.+
T Consensus 145 -ag~p~~~v~~~~~~~~~~~~~l~~~~~vd~v~~tGs~~~~~~v~~~~~~~~~~~~~e~~g~~~~iV~~~ad~~~aa~~i 223 (367)
T cd06534 145 -AGLPPGVVNVVPGGGDEVGAALLSHPRVDKISFTGSTAVGKAIMKAAAENLKPVTLELGGKSPVIVDEDADLDAAVEGA 223 (367)
T ss_pred -cCCCcCeEEEEEcCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCeEEECCCCCHHHHHHHH
Confidence 6 89999999995 4446666667889999999999999999988763 8999999999999999999999999999
Q ss_pred HhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCCEEecCccccccccC-CCCccccccccCceEEEEEeCCH
Q 006484 531 IDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLQI-PETRLFHHEYNSMVCTVEIVDDV 608 (643)
Q Consensus 531 v~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~~~~g~~~~~~~~pv-~~~~~~~eE~FgPvl~v~~~~~~ 608 (643)
++++|.++| .|++++++|||+++| |+|+++|+ .+... + +++++++||+|||+++|++|+|+
T Consensus 224 ~~~~~~~~gq~C~s~~~v~v~~~~~-~~f~~~l~--------tl~~~--------~~~~~~~~~~E~fgPv~~v~~~~~~ 286 (367)
T cd06534 224 VFGAFFNAGQICTAASRLLVHESIY-DEFVEKLV--------TVLVD--------VDPDMPIAQEEIFGPVLPVIRFKDE 286 (367)
T ss_pred HHHHHhcCCCCCCCCcEEEEcHHHH-HHHHHhhc--------eeeeC--------CCCCCccccCCccCceEEEEecCCH
Confidence 999999988 999999999999999 79998887 22211 1 34688999999999999999999
Q ss_pred HHHHHHHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 609 RAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 609 deAi~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
||||+++|++++||++||||+|...++++++++++
T Consensus 287 ~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~~ 321 (367)
T cd06534 287 EEAIALANDTEYGLTAGVFTRDLNRALRVAERLRA 321 (367)
T ss_pred HHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhCCc
Confidence 99999999999999999999999999999998864
No 128
>COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism]
Probab=100.00 E-value=6.8e-50 Score=404.84 Aligned_cols=352 Identities=39% Similarity=0.677 Sum_probs=336.3
Q ss_pred HhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhhHHHHHhhcChhHHHHHHHH
Q 006484 291 VGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKS 370 (643)
Q Consensus 291 ~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~ 370 (643)
.++.+..++||+|++..+.++.++|.+.|.++|+.|+++.++|.+++.+|++.+++.|+++++.+|+.++..+++.+++.
T Consensus 3 ~~~~~~~~~Ak~A~~~La~~st~~Kn~aL~a~A~~L~~~~~~IL~AN~~Dl~~are~gl~~~m~DRL~L~~~Ri~~ma~g 82 (417)
T COG0014 3 SELEELGKRAKAASRKLATLSTEEKNRALLAMADALEAARAEILAANAKDLAAARENGLSEAMLDRLALTPSRIEAMADG 82 (417)
T ss_pred hHHHHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHhHHHHHHhhHHHHHHHHHcCCcHHHHHHHcCCHHHHHHHHHH
Confidence 36678889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcccccccccccccccCCCeeEEEEeeeeeeEEEEcCCCchhHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHH
Q 006484 371 IRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVI 450 (643)
Q Consensus 371 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~~P~~~~~~~~~AlaaGN~vi~Kps~~tp~t~~~~~~l~ 450 (643)
++..+.++||+|+.+..+..++|...+.+|.|+||+++|+..+|++++...+.+|++||+||||.+..+..|+..+.+++
T Consensus 83 l~~Va~L~DPvGev~~~~~~~nGL~i~~~rvPLGVigvIYEsRPnVtvdaaaLclKsGNAvILRGGsea~~Sn~ai~~~i 162 (417)
T COG0014 83 LRQVAALPDPVGEVIDGWTLPNGLQIYRVRVPLGVIGVIYESRPNVTVDAAALCLKSGNAVILRGGSEAIHSNAAIVEVI 162 (417)
T ss_pred HHHHhcCCCchHhhhccccCCCCCEEEEEEccceEEEEEEecCCccHHHHHHHHHhcCCEEEEeCcHHHhhhHHHHHHHH
Confidence 99999999999999888888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcccc-cCcCceEeec--CcchHhHhhhCCCCccEEEeecCHHHHHHHHHhcCCCEEEecCccceEEEcCCCCHHHHH
Q 006484 451 TSAIPDT-VGEKLIGLVT--SREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAK 527 (643)
Q Consensus 451 ~~a~~~a-lP~g~v~~v~--~~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a~~p~~lelGG~~p~iV~~dAdl~~A~ 527 (643)
+++|.++ +|++.||+++ +++.+.++|..+..||+|...||....+.|.+.+..||+..+-|+|++||+++||+|+|.
T Consensus 163 ~~aL~~~~lP~~aVqli~~~~R~~v~~ll~l~~yiD~iIPRGg~~Li~~v~~~a~vPVi~~~~G~CHiyvd~~ADld~A~ 242 (417)
T COG0014 163 QEALEKAGLPADAVQLIEDTDREEVLELLRLDGYIDLVIPRGGAGLIRRVVENATVPVIEHGVGNCHIYVDESADLDKAL 242 (417)
T ss_pred HHHHHHcCCCHHHhhhccCCCHHHHHHHHhhcCceeEEEcCCcHHHHHHHHhCCcCCEEecCcceEEEEecccCCHHHHH
Confidence 9999999 9999999998 478899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCCccccceeEEEcCccCCchhHHHHHHHHHHcCCEEecCcccccccc---C-CCCccccccccCceEEEE
Q 006484 528 NIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLQ---I-PETRLFHHEYNSMVCTVE 603 (643)
Q Consensus 528 ~~iv~~~~~n~g~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~~~~g~~~~~~~~p---v-~~~~~~~eE~FgPvl~v~ 603 (643)
+.++++|.+....|++.+-++||+.++ ++|+.+|.+.+.+.|+.+.|++....++| . .+...|..|+..++++|.
T Consensus 243 ~ii~nAKtqrPs~CNA~EtLLVh~~ia-~~fLp~l~~~l~~~gvelr~d~~~~~~~~~~~~~A~e~Dw~tEyLd~ilavk 321 (417)
T COG0014 243 KIIVNAKTQRPSVCNAAETLLVHRAIA-KSFLPKLANALQEAGVELRGDAEALALLPDAVKPATEEDWDTEYLDLILAVK 321 (417)
T ss_pred HHHHcccCCCCcccchHHHHHcCHHHH-HHhHHHHHHHHHhcCeEEEcCHHHHHhccccCCCCchhhHHHHhhhheeEEE
Confidence 999999999999999999999999999 89999999999999999999987666665 2 246789999999999999
Q ss_pred EeCCHHHHHHHHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 604 IVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 604 ~~~~~deAi~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
.++++||||+++|.++.+||-+|.|+|...+++|.+++++
T Consensus 322 vVd~ld~AI~HIn~y~S~HsdaIiTe~~~~a~~F~~~VDS 361 (417)
T COG0014 322 VVDSLDEAIAHINTYGSGHSDAIITEDYANAERFVNEVDS 361 (417)
T ss_pred EeCCHHHHHHHHHHhCCCCCcceeeCCHHHHHHHHhhcch
Confidence 9999999999999999999999999999999999999875
No 129
>COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=5.6e-50 Score=413.78 Aligned_cols=333 Identities=19% Similarity=0.227 Sum_probs=283.7
Q ss_pred CceeeEEecCccccccHHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhhHH
Q 006484 274 KRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSL 353 (643)
Q Consensus 274 ~~~GT~i~~~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~g~~~~~ 353 (643)
+..|++..++ ++++++|++.|..|++.|..+|+.+|+.+|++++++++.+..+|..++.+|-+|+ ++.+
T Consensus 139 dvVG~V~ea~------~~~v~~A~~~A~~a~p~W~atp~~eRAaiL~raAdlme~~m~~L~~L~~REAGKt----l~na- 207 (769)
T COG4230 139 DIVGTVTEAT------EADVEQALEAAVAAAPIWSATPPAERAAILERAADLMEAQMPQLMGLLVREAGKT----LSNA- 207 (769)
T ss_pred HCeeeeeecC------HHHHHHHHHHHHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc----hhhH-
Confidence 4579998888 8999999999999999999999999999999999999999999998887776543 2222
Q ss_pred HHHhhcChhHHHHHHHHHHHHhcccc-cccccccccccCCCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHHHHHHHhCCE
Q 006484 354 VSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNG 430 (643)
Q Consensus 354 ~~~~~~~~~~i~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~~AlaaGN~ 430 (643)
+.|+++++++|+||+...+ +.|. ..++|+|+|..|+|| ||. +....++.||++||+
T Consensus 208 -------IAEVREAVDFlrYYA~~ar~~~g~--------------~~~~~~G~vVcISPWNFPLAIFtGqiaAAL~aGN~ 266 (769)
T COG4230 208 -------IAEVREAVDFLRYYAGQARDTFGN--------------LTHRPLGPVVCISPWNFPLAIFTGQIAAALAAGNS 266 (769)
T ss_pred -------HHHHHHHHHHHHHHHHHHhcccCc--------------cccCCCCcEEEECCCCchHHHHHhHHHHHHHcCCc
Confidence 4578999999999986543 2211 357899999999999 585 445789999999999
Q ss_pred EEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeecC-cchHhHhhhCCCCccEEEeecCHHHHHHHHHhc----C--
Q 006484 431 LLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST----K-- 502 (643)
Q Consensus 431 vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a----~-- 502 (643)
|+-||+|+||+.+..-.+++++ + +|++++|+++| +++++..|..++++++|.|||||++.+.|.++- +
T Consensus 267 VlAKPAEqTpLIAa~aV~ll~e----AGvP~~~lqLLpG~G~tvGa~L~~darv~GV~FTGSTevA~li~~~LA~r~g~~ 342 (769)
T COG4230 267 VLAKPAEQTPLIAAQAVRLLHE----AGVPPGVLQLLPGRGETVGAALTADARVAGVMFTGSTEVARLIQRQLAKRQGRP 342 (769)
T ss_pred cccCccccccHHHHHHHHHHHH----cCCChhhHHhcCCCCcccchhhhcCcccceEEEeCcHHHHHHHHHHHhhcCCCC
Confidence 9999999999999999999998 7 99999999995 667899999999999999999999999986543 2
Q ss_pred CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCCE----E---e
Q 006484 503 IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVG----L---F 574 (643)
Q Consensus 503 ~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~~----~---~ 574 (643)
.|++.|.||-|+||||.+|--|+++.+++.|+|.++| +|++..-++++++++ |..+++|+-++.++.+. + +
T Consensus 343 ~pLIAETGGqNAMIVDSsAL~EQVv~Dvl~SAFdSAGQRCSALRvLclQ~DvA-d~~l~mLKGAm~el~~G~p~~l~tDV 421 (769)
T COG4230 343 IPLIAETGGQNAMIVDSSALAEQVVADVLASAFDSAGQRCSALRVLCLQEDVA-DRILTMLKGAMAELRVGNPDRLTTDV 421 (769)
T ss_pred CceEeccCCcceEEeechhhHHHHHHHHHHHHhhcccchhhhhhhhhhhhhHH-HHHHHHHHHHHHHhccCCccceeccc
Confidence 7899999999999999999999999999999999998 999999999999999 79999999999887531 0 0
Q ss_pred cC---cc----------------------------ccc-cc-c-C---CCCccccccccCceEEEEEeC--CHHHHHHHH
Q 006484 575 GG---PR----------------------------ASK-LL-Q-I---PETRLFHHEYNSMVCTVEIVD--DVRAAIDHI 615 (643)
Q Consensus 575 g~---~~----------------------------~~~-~~-p-v---~~~~~~~eE~FgPvl~v~~~~--~~deAi~~a 615 (643)
|. .+ ..+ |+ | + ..-..++.|+|||||.|++|+ ++|+.|+.+
T Consensus 422 GPVIdaEAk~~i~~Hi~~mr~~gr~v~q~~~~~~~q~GtFv~Ptl~El~~~~eL~rEVFGPVLHVvRy~~~~l~~vi~~I 501 (769)
T COG4230 422 GPVIDAEAKANIEKHIQTMRSKGRLVHQAAAPNSLQKGTFVAPTLIELENLDELQREVFGPVLHVVRYKRDELDEVIDQI 501 (769)
T ss_pred cccccHHHHHHHHHHHHHHHhcccchhhccCCCccCCceeeCceeEEcCCHHHHHHHhccceeEEEEecHHHHHHHHHHH
Confidence 10 00 001 11 2 1 223567899999999999997 789999999
Q ss_pred HccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 616 HQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 616 N~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
|.++|||+.+|||+..+.+.++.+++.+
T Consensus 502 NatGyGLT~GvHtRideti~~v~~~~~a 529 (769)
T COG4230 502 NATGYGLTLGVHTRIDETIAHVTERAHA 529 (769)
T ss_pred hccCcceeeeeecchHHHHHHHHhhccc
Confidence 9999999999999999999999887653
No 130
>COG0263 ProB Glutamate 5-kinase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-46 Score=377.08 Aligned_cols=255 Identities=42% Similarity=0.667 Sum_probs=234.2
Q ss_pred hcccceEEEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcCCCcccccCcccch
Q 006484 11 VKDVKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNEL 90 (643)
Q Consensus 11 ~~~~~~iVIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~~~~~~l~~~~~~l 90 (643)
+++.+++|||+|.|+|+++.+.++..++..++++|+.|+++|++||||+||+...|...++... ++..+..
T Consensus 3 ~~~~~riVvKiGSs~Lt~~~g~l~~~~l~~l~~~ia~L~~~G~eVilVSSGAiaaG~~~Lg~~~----rp~~l~~----- 73 (369)
T COG0263 3 LSSARRIVVKIGSSSLTDGTGGLDRSKLEELVRQVAALHKAGHEVVLVSSGAIAAGRTRLGLPK----RPKTLAE----- 73 (369)
T ss_pred CCcceEEEEEECcceeeCCCCCcCHHHHHHHHHHHHHHHhCCCEEEEEccchhhhChhhcCCCC----CCcchHH-----
Confidence 5678999999999999998778999999999999999999999999999999999987766433 3334544
Q ss_pred hHHHHHHhchHHHHHHHHHHhccCCCCcceeEecccccCcchhhchHHHHHHHHHhCCCeeEecCCCceeccCCCCCCCC
Q 006484 91 DGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSS 170 (643)
Q Consensus 91 ~~~~~~a~G~~~~~~~~~~~l~~~g~~~~~~~~t~~~~~~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~~~ 170 (643)
+|+++++||..++..|++.|..+|+.++|+++|.+||.++.+|.|...+|..||+.|.|||||+||+|+. ++
T Consensus 74 -kQA~AAVGQ~~Lm~~y~~~f~~~g~~v~QiLLTr~D~~~r~ry~Nar~Tl~~Ll~~gvVPIINENDtva~-------~E 145 (369)
T COG0263 74 -KQAAAAVGQVRLMQLYEELFARYGIKVGQILLTRDDFSDRRRYLNARNTLSALLELGVVPIINENDTVAT-------EE 145 (369)
T ss_pred -HHHHHHhCHHHHHHHHHHHHHhcCCeeeEEEeehhhhhhHHHHHHHHHHHHHHHHCCceeeecCCCceee-------ee
Confidence 5699999999999999999999999999999999999999999999999999999999999999999998 67
Q ss_pred ceeecchhHHHHHHhhcCCCEEEEeccCCccccCCCC-CCCccceeeeec-c-cchhHHhcCCCCCccCCCchHHHHHHH
Q 006484 171 GIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIR-A-KHQAEITFGDKSRVGRGGMTAKVNAAY 247 (643)
Q Consensus 171 ~~~~~~D~~A~~lA~~L~Ad~li~lTdVdGVy~~~P~-~p~a~~i~~i~~-~-e~~~~~~~g~~~~~~~ggM~~Kl~aa~ 247 (643)
..|+|+|++++.+|...+||.|++|||+||+|++||+ +|++++|++++. . |+. .+..|++|..+||||.+|+.|+.
T Consensus 146 ikfGDND~LsA~VA~lv~ADlLvlLsDiDGLyd~nPr~~pdAk~i~~V~~it~ei~-~~aggsgs~~GTGGM~TKl~AA~ 224 (369)
T COG0263 146 IKFGDNDTLSALVAILVGADLLVLLSDIDGLYDANPRTNPDAKLIPEVEEITPEIE-AMAGGSGSELGTGGMRTKLEAAK 224 (369)
T ss_pred eeecCCchHHHHHHHHhCCCEEEEEEccCcccCCCCCCCCCCeeehhhcccCHHHH-HHhcCCCCCCCcccHHHHHHHHH
Confidence 7899999999999999999999999999999999995 999999999974 2 444 46677888999999999999999
Q ss_pred HHHHcCCcEEEEeCCCcchHHHHHcCCceeeEEecC
Q 006484 248 CAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 283 (643)
Q Consensus 248 ~a~~~gv~v~I~~g~~~~~l~~~~~g~~~GT~i~~~ 283 (643)
.|.+.|++++|++|..|+.+.+++.++..||+|.+.
T Consensus 225 iA~~aG~~~iI~~g~~~~~i~~~~~~~~~GT~F~~~ 260 (369)
T COG0263 225 IATRAGVPVIIASGSKPDVILDALEGEAVGTLFEPQ 260 (369)
T ss_pred HHHHcCCcEEEecCCCcchHHHHHhCCCCccEEecC
Confidence 999999999999999999999999999999999976
No 131
>KOG2452 consensus Formyltetrahydrofolate dehydrogenase [Nucleotide transport and metabolism]
Probab=100.00 E-value=5.7e-47 Score=383.31 Aligned_cols=318 Identities=15% Similarity=0.173 Sum_probs=255.8
Q ss_pred HHhHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhhHHHHHhhcChhHHHHH
Q 006484 290 QVGAREMAVAARESSR--RLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSL 367 (643)
Q Consensus 290 ~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~ 367 (643)
-.++++|+.+|+.||. .|+++|.++|.+.|.++++++++|++||+.+...|.+.. ++-++ ...+...
T Consensus 458 v~dvd~av~aak~afe~g~w~~~sar~rg~~~y~la~lme~h~eelat~e~ldagav----ytlal-------kthvgms 526 (881)
T KOG2452|consen 458 VTDVDKAVAAAKGAFENGRWGKISARDRGRLMYRLADLMEQHQEELATIEALDAGAV----YTLAL-------KTHVGMS 526 (881)
T ss_pred hhhHHHHHHHHhhhhhcCcccccchhhhhhhhhhccchhhhccchhhhhhhccccce----eeeee-------hhhcCce
Confidence 4689999999999997 599999999999999999999999999998655443211 11111 1234445
Q ss_pred HHHHHHHhccccc-cccccccc-ccCCCeeEEEEeeeeeeEEEEcCC-Cchh-HHHHHHHHHHhCCEEEEeCCcchHHHH
Q 006484 368 AKSIRILADMEEP-IGQILKRT-ELADGLILEKTSCPLGVLLIVFES-RPDA-LVQIASLAIRSGNGLLLKGGKEAMRSN 443 (643)
Q Consensus 368 ~~~~~~~~~~~~~-~g~~~~~~-~~~~~~~~~~~~~PlGvv~~I~p~-~P~~-~~~~~~~AlaaGN~vi~Kps~~tp~t~ 443 (643)
++.+|++++|.+. .|.+++.. .+++.....++++|+|||++|+|| ||.+ ..|+.+.+|+|- -
T Consensus 527 i~~~ryfagwcdkiqg~tipi~~arpn~nl~lt~~epigv~g~i~pwnyplmmlswk~aaclaa~--------------~ 592 (881)
T KOG2452|consen 527 IQTFRYFAGWCDKIQGSTIPINQARPNRNLTLTRKEPVGVCGIIIPWNYPLMMLSWKTAACLAAQ--------------V 592 (881)
T ss_pred ehHHHHhhhhhhhccCceeccccCCCCCcceeeecCcceeEEEeccCCchHHHHHHHHHHHHHHH--------------H
Confidence 6677777777654 46665532 233434456789999999999999 5864 568988777752 1
Q ss_pred HHHHHHHHHhcccccCcCceEeec-CcchHhHhhhCCCCccEEEeecCHHHHHHHHHhcC----CCEEEecCccceEEEc
Q 006484 444 AILHKVITSAIPDTVGEKLIGLVT-SREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK----IPVLGHADGICHVYVD 518 (643)
Q Consensus 444 ~~~~~l~~~a~~~alP~g~v~~v~-~~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a~----~p~~lelGG~~p~iV~ 518 (643)
..+++ -.|++|+++ +++.+++-|..||+|++|-||||+++|+.||++|+ |.+.|||||++|+|++
T Consensus 593 ~k~~e----------~sgvini~~gsgslvg~rls~hpdvrkigftgsteig~~im~sca~snikkvslelgg~sp~iif 662 (881)
T KOG2452|consen 593 LKFAE----------LTGVVNVLPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCAISNVKKVSLELGGESPFIIF 662 (881)
T ss_pred hhhhh----------hcceEEEecCCcchhccccccCCccceeccccchHHHHHHHHHHhhcchheeeeeccCCCceEEE
Confidence 12222 268999999 47788999999999999999999999999999884 8899999999999999
Q ss_pred CCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCCE-------------------------
Q 006484 519 KSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVG------------------------- 572 (643)
Q Consensus 519 ~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~~------------------------- 572 (643)
.|||+++|++....+.|+|-| .|++.-|+||.+||+ |+|+.+++++++++.+.
T Consensus 663 ad~dl~kav~~~~~~vff~kgenciaagr~fi~~sih-d~fv~~~vee~~~~~ig~pldr~t~hgpqnh~ahl~kl~ey~ 741 (881)
T KOG2452|consen 663 ADCDLNKAVQMGMSSVFFSKGENCIAAGRLFVEDSIH-DEFVRRVVEEVRKMKVGNPLDRDTDHGPQNHHAHLVKLMEYC 741 (881)
T ss_pred ecCcHHHHHHhhccceeecCCcchhhhcceeehhhhh-HHHHHHHHHHHHhhccCCcccccccCCchhHHHHHHHHHHHH
Confidence 999999999999999999999 999999999999999 79999999999987431
Q ss_pred ---------E-ecCccc--cc-cc-c-C----C-CCccccccccCceEEEEEeC--CHHHHHHHHHccCCCceeEEEecC
Q 006484 573 ---------L-FGGPRA--SK-LL-Q-I----P-ETRLFHHEYNSMVCTVEIVD--DVRAAIDHIHQHGSAHTDCIVAED 630 (643)
Q Consensus 573 ---------~-~g~~~~--~~-~~-p-v----~-~~~~~~eE~FgPvl~v~~~~--~~deAi~~aN~~~~GL~a~v~t~d 630 (643)
+ +|+.+. .+ || | | . .|-+..||.||||+.|.+|+ |+|+.++.+|+++|||+++|||+|
T Consensus 742 ~~~v~~ga~~~~gg~~~~r~g~~f~pti~s~i~d~~f~a~eesfgpim~is~f~d~d~~~vl~ran~tefgla~gvftrd 821 (881)
T KOG2452|consen 742 QHGVKEGATLVCGGNQVPRPGFFFEPTVFTDVEDHMFIAKEESFGPVMIISRFADGDLDAVLSRANATEFGLASGVFTRD 821 (881)
T ss_pred HHHhccCcEEEECCccCCCCCcccCCeeecccchhhhhhhccccCceEEEEecCCCCHHHHHhhccccccccccceeecc
Confidence 1 344322 12 23 3 3 2 36788999999999999997 578999999999999999999999
Q ss_pred HHHHHHHHHhcCC
Q 006484 631 QKVAETFLCQVDR 643 (643)
Q Consensus 631 ~~~~~~~~~~l~~ 643 (643)
..++.++++.+.+
T Consensus 822 ~~k~l~v~~~l~a 834 (881)
T KOG2452|consen 822 INKALYVSDKLQA 834 (881)
T ss_pred cchhhhhhhhhcc
Confidence 9999999998764
No 132
>KOG2453 consensus Aldehyde dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=9.8e-46 Score=360.74 Aligned_cols=334 Identities=16% Similarity=0.206 Sum_probs=278.7
Q ss_pred HHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhhHHHHHhhcChhHHHHHHH
Q 006484 290 QVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAK 369 (643)
Q Consensus 290 ~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~ 369 (643)
-++.+.+++.|++|++.|...|...|.++++++.|.|+...+-|-.+...+|++-...| ..+++.+++
T Consensus 54 v~dye~~~k~a~ea~kiw~~vpapkrgeivrqigdalr~klq~lg~lvslemgkilaeg------------vgevqeyvd 121 (507)
T KOG2453|consen 54 VQDYEIAIKEAKEAYKIWCEVPAPKRGEIVRQIGDALRTKLQNLGKLVSLEMGKILAEG------------VGEVQEYVD 121 (507)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhhhhhhhhhhHhhhc------------chhHHHHHH
Confidence 56889999999999999999999999999999999999999999888877775532222 356788888
Q ss_pred HHHHHhcccccc-cccccccccCCCeeEEEEeeeeeeEEEEcCC-Cch-hHHHHHHHHHHhCCEEEEeCCcchHHHHHHH
Q 006484 370 SIRILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAIL 446 (643)
Q Consensus 370 ~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~-~P~-~~~~~~~~AlaaGN~vi~Kps~~tp~t~~~~ 446 (643)
.+++..++.+.. |..+|. .+ ++.....++.|+|+|++|+.+ +|. .--|.-+.|+.+||+|++||++.+|+++...
T Consensus 122 icdyavglsr~l~g~i~ps-er-pghalleqwnplg~vgvitafnfpcavygwnnaiaMv~gncVvWKpApttpLtTiAv 199 (507)
T KOG2453|consen 122 ICDYAVGLSRSLEGKIFPS-ER-PGHALLEQWNPLGVVGVITAFNFPCAVYGWNNAIAMVCGNCVVWKPAPTTPLTTIAV 199 (507)
T ss_pred HHHHhhhhhhhhCCcccCC-CC-CchhHHHhcCCcceEEEEEeccCCceeeccCchhhhhhcceeEecCCCCcceeHHHH
Confidence 888876666654 444442 23 345556789999999999986 574 3446667799999999999999999999999
Q ss_pred HHHHHHhcccc-cCcCceEeecCcchHhHhhhCCCCccEEEeecCHHHHHHHHHhc---CCCEEEecCccceEEEcCCCC
Q 006484 447 HKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---KIPVLGHADGICHVYVDKSAN 522 (643)
Q Consensus 447 ~~l~~~a~~~a-lP~g~v~~v~~~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a---~~p~~lelGG~~p~iV~~dAd 522 (643)
.+++.+.|.+- +|++.....+|..+.+..+..+.+++.++||||+++||.+.+.- .-+.+|||||||+.||++|||
T Consensus 200 tklIaevL~qnnl~~aicsltcG~aDigrAaakdgRvnlvsftGssQvgKsvgq~vqarfgk~llelggnnaiiv~edad 279 (507)
T KOG2453|consen 200 TKLIAEVLEQNNLPGAICSLTCGGADIGRAAAKDGRVNLVSFTGSSQVGKSVGQQVQARFGKLLLELGGNNAIIVNEDAD 279 (507)
T ss_pred HHHHHHHHhccCCCcceeeecccchhhhhhccccCceeecccccchhhhhHHHHHHHHHhhhHHHhhcCCceEEEecccc
Confidence 99999999888 99999888888777888888899999999999999999886543 256788999999999999999
Q ss_pred HHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCCE-------Ee--------------------
Q 006484 523 LDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVG-------LF-------------------- 574 (643)
Q Consensus 523 l~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~~-------~~-------------------- 574 (643)
+..++...++++...+| +|+...|++||+++| |+.+++|+..+++..+. +.
T Consensus 280 l~lvvps~lfaavgtagqrctt~rrl~~hesvy-d~vlerlkkayaq~~ignpld~ntl~gplht~qav~~f~~~veeak 358 (507)
T KOG2453|consen 280 LNLVVPSTLFAAVGTAGQRCTTTRRLIVHESVY-DQVLERLKKAYAQFEIGNPLDSNTLIGPLHTQQAVGKFKASVEEAK 358 (507)
T ss_pred ceeeehHHHHHHhcccccchhhhhHHHhhHHHH-HHHHHHHHHHHHheecCCcCCCCceeccccCHHHHHHHHHHHHHHH
Confidence 99999999999999988 999999999999999 79999999988876321 11
Q ss_pred --------cCccc--cc-cc-c-C----CCCccccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEecCHHHHHHH
Q 006484 575 --------GGPRA--SK-LL-Q-I----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETF 637 (643)
Q Consensus 575 --------g~~~~--~~-~~-p-v----~~~~~~~eE~FgPvl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~~~~~ 637 (643)
|+... .+ |+ | | .+.++..+|+|.|||.|.+|++++||+.+-|..+.||+++|||+|+.++.++
T Consensus 359 ~~ggki~yggkv~er~gnfveptivtl~hda~vv~~etfapilyvlkf~~~eea~ainnev~qglsssift~n~~nifrw 438 (507)
T KOG2453|consen 359 ASGGKIEYGGKVLERDGNFVEPTIVTLKHDAPVVLRETFAPILYVLKFSTLEEAIAINNEVDQGLSSSIFTTNIQNIFRW 438 (507)
T ss_pred hcCCeEEECCEeeccCCCcccceEEEecCCcchhhhhhccceeeEEeccchhhhheeccccccccchhhhhcCHHHHHhh
Confidence 11100 01 11 4 2 2467899999999999999999999999999999999999999999999887
Q ss_pred H
Q 006484 638 L 638 (643)
Q Consensus 638 ~ 638 (643)
.
T Consensus 439 ~ 439 (507)
T KOG2453|consen 439 M 439 (507)
T ss_pred h
Confidence 5
No 133
>KOG1154 consensus Gamma-glutamyl kinase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.3e-44 Score=337.06 Aligned_cols=273 Identities=56% Similarity=0.832 Sum_probs=239.2
Q ss_pred HhhhcccceEEEEeCCcccccCCC-ccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcCCCcccccCc
Q 006484 8 RAFVKDVKRLVVKVGTAVVTRSDG-RLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKP 86 (643)
Q Consensus 8 ~~~~~~~~~iVIKlGGs~l~~~~~-~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~~~~~~l~~~ 86 (643)
|.++++.++||||+|.+++++++. .+...++..+++++++|++.|++++||.+|+..+|+..+.....++..+++.-..
T Consensus 3 r~~~kka~rIVVKLGSavit~e~~~~laLgrla~IVEqV~~L~~~G~evilVSSGaVA~G~qrLr~~~~~s~s~r~~l~~ 82 (285)
T KOG1154|consen 3 RAFLKKAYRIVVKLGSAVITREDTCGLALGRLASIVEQVSELQRMGREVILVSSGAVAFGRQRLRQELLPSSSMRQTLKP 82 (285)
T ss_pred chhhccceEEEEEecceEEECCCCccchHHHHHHHHHHHHHHHhcCceEEEEecchhhhhHHHhhhhhccchhHHHhhCC
Confidence 456888899999999999999876 4778889999999999999999999999999999998776655555455553222
Q ss_pred c-cchhHHHHHHhchHHHHHHHHHHhccCCCCcceeEecccccCcchhhchHHHHHHHHHhCCCeeEecCCCceeccCCC
Q 006484 87 Q-NELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAP 165 (643)
Q Consensus 87 ~-~~l~~~~~~a~G~~~~~~~~~~~l~~~g~~~~~~~~t~~~~~~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~ 165 (643)
+ +...+++++++||.++|++|+..|.++++.++|+++|+.||.+...|.+...+|.+||..|+|||+|+||.+++..++
T Consensus 83 ~~~l~e~rA~AAvGQ~~Lmalye~lF~Qy~~~iAQvLvT~~Di~d~~~r~Nl~~Ti~eLL~m~viPIvNeNDavs~~~~~ 162 (285)
T KOG1154|consen 83 QSELAEKRACAAVGQSGLMALYETLFTQYGITIAQVLVTRNDILDEQQRKNLQNTISELLSMNVIPIVNENDAVSPREIP 162 (285)
T ss_pred ccchhhHHHHHHhCcchHHHHHHHHHHHhccchheeeecCcchhhHHHHHHHHHHHHHHHhCCceeeecCCCccCCcccc
Confidence 2 234567999999999999999999999999999999999999999999999999999999999999999999985433
Q ss_pred CCCCCceeecchhHHHHHHhhcCCCEEEEeccCCccccCCCCCCCccceeeeecccchhHHhcCCCCCccCCCchHHHHH
Q 006484 166 YEDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNA 245 (643)
Q Consensus 166 ~~~~~~~~~~~D~~A~~lA~~L~Ad~li~lTdVdGVy~~~P~~p~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~Kl~a 245 (643)
+.+. -|+|++|+.+|..++||.|+++|||||+|+++|....+++|+..+..+......+|++|.++||||..|+.|
T Consensus 163 ~~D~----~dNDsLsA~laaei~ADlLilLsDVdglYt~PPd~~~~~li~~~~~~~~~v~~tfG~~SkvGtGGM~tKv~A 238 (285)
T KOG1154|consen 163 FGDS----SDNDSLAAILAAEIKADLLILLSDVDGLYTGPPDADPSKLIHTFSPGDPQVSTTFGSKSKVGTGGMETKVKA 238 (285)
T ss_pred cCCC----CcccHHHHHHHHHhccCEEEEEecccccccCCCCCCcceeeeeeccCCCCCccccCccCccCcCcchhhHHH
Confidence 3211 259999999999999999999999999999888655578999998887775678899999999999999999
Q ss_pred HHHHHHcCCcEEEEeCCCcchHHHHHcCCceeeEEecCc
Q 006484 246 AYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRDA 284 (643)
Q Consensus 246 a~~a~~~gv~v~I~~g~~~~~l~~~~~g~~~GT~i~~~~ 284 (643)
|..|...|++|+|+||..|+.+.+++.|...||.+....
T Consensus 239 A~~A~~~Gv~viI~~g~~p~~I~~iv~g~kvgt~f~~~~ 277 (285)
T KOG1154|consen 239 AVNALNAGVSVIITNGDAPENITDIVEGKKVGTFFEQLK 277 (285)
T ss_pred HHHHhcCCceEEEeCCCChHHHHHHHhhhhhhhhhhhcc
Confidence 999999999999999999999999999998999887653
No 134
>cd04256 AAK_P5CS_ProBA AAK_P5CS_ProBA: Glutamate-5-kinase (G5K) domain of the bifunctional delta 1-pyrroline-5-carboxylate synthetase (P5CS), composed of an N-terminal G5K (ProB) and a C-terminal glutamyl 5- phosphate reductase (G5PR, ProA), the first and second enzyme catalyzing proline (and, in mammals, ornithine) biosynthesis. G5K transfers the terminal phosphoryl group of ATP to the gamma-carboxyl group of glutamate, and is subject to feedback allosteric inhibition by proline or ornithine. In plants, proline plays an important role as an osmoprotectant and, in mammals, ornithine biosynthesis is crucial for proper ammonia detoxification, since a G5K mutation has been shown to cause human hyperammonaemia.
Probab=100.00 E-value=1.4e-43 Score=361.46 Aligned_cols=271 Identities=58% Similarity=0.838 Sum_probs=229.0
Q ss_pred hhhcccceEEEEeCCcccccCCC-ccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcC-------CCc
Q 006484 9 AFVKDVKRLVVKVGTAVVTRSDG-RLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVN-------SSL 80 (643)
Q Consensus 9 ~~~~~~~~iVIKlGGs~l~~~~~-~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~-------~~~ 80 (643)
+.+.+.+++|||+|||+|+++++ .++.+.+..++++|+.|++.|+++|||.||+.++|+..++.+.... .+.
T Consensus 3 ~~~~~~~~iVvKiGss~lt~~~~~~~~~~~l~~l~~~i~~l~~~g~~vilVssGAv~~G~~~l~~~~~~~~~~~~~~~g~ 82 (284)
T cd04256 3 SELKHAKRIVVKLGSAVVTREDECGLALGRLASIVEQVSELQSQGREVILVTSGAVAFGKQRLRHEILLSSSMRQTLKSG 82 (284)
T ss_pred hhhccCCEEEEEeCchhccCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEEeeCcHHhChHHhhhccccccchhhhcccc
Confidence 34666789999999999999876 7899999999999999999999999999999999998876543111 111
Q ss_pred ccccCcccchhHHHHHHhchHHHHHHHHHHhccCCCCcceeEecccccCcchhhchHHHHHHHHHhCCCeeEecCCCcee
Q 006484 81 ADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVS 160 (643)
Q Consensus 81 ~~l~~~~~~l~~~~~~a~G~~~~~~~~~~~l~~~g~~~~~~~~t~~~~~~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~ 160 (643)
...+.....+.+|+++++||..++.+|++.|..+++++.|+++|.+||.++..+.+..+.|+.||+.|+|||++|||+|+
T Consensus 83 ~~~~~~~~~~~~qa~aa~gq~~L~~~y~~~f~~~~~~~~q~llt~~d~~~~~~~~~~~~~l~~lL~~g~iPVi~~nD~v~ 162 (284)
T cd04256 83 QLKDMPQMELDGRACAAVGQSGLMALYEAMFTQYGITVAQVLVTKPDFYDEQTRRNLNGTLEELLRLNIIPIINTNDAVS 162 (284)
T ss_pred cccCCcchhHHHHHHHHcccHHHHHHHHHHHHHcCCcHHHeeeeccccccHHHHHHHHHHHHHHHHCCCEEEEeCCCccc
Confidence 11222233456889999999999999999999999999999999999998888888889999999999999999999998
Q ss_pred ccCCCCCC-CC-ceeecchhHHHHHHhhcCCCEEEEeccCCccccCCCCCCCccceeeeecccchhHHhcCCCCCccCCC
Q 006484 161 TRKAPYED-SS-GIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGG 238 (643)
Q Consensus 161 ~~~~~~~~-~~-~~~~~~D~~A~~lA~~L~Ad~li~lTdVdGVy~~~P~~p~a~~i~~i~~~e~~~~~~~g~~~~~~~gg 238 (643)
+....+.+ .+ ..++|+|++|+.+|.+++||+|+|+|||||||++||++|++++|++++.++... +..+..+.+++||
T Consensus 163 ~~~~~~~~~~~~~~i~d~D~lAa~lA~~l~Ad~Li~lTDVdGVy~~dP~~~~a~~I~~i~~~~~~~-~~~~~~s~~gtGG 241 (284)
T cd04256 163 PPPEPDEDLQGVISIKDNDSLAARLAVELKADLLILLSDVDGLYDGPPGSDDAKLIHTFYPGDQQS-ITFGTKSRVGTGG 241 (284)
T ss_pred ccccccccccccccccChHHHHHHHHHHcCCCEEEEEeCCCeeecCCCCCCCCeEcccccHhHHHH-hhcccccCcccCC
Confidence 63211111 11 135999999999999999999999999999999999889999999999877653 3334445688999
Q ss_pred chHHHHHHHHHHHcCCcEEEEeCCCcchHHHHHcCCceeeEE
Q 006484 239 MTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLF 280 (643)
Q Consensus 239 M~~Kl~aa~~a~~~gv~v~I~~g~~~~~l~~~~~g~~~GT~i 280 (643)
|.+|++++..+.+.|++++|+||+.|+.+.+++.|+..||+|
T Consensus 242 M~~Kl~Aa~~a~~~Gi~v~I~~G~~~~~i~~~l~G~~~GT~~ 283 (284)
T cd04256 242 MEAKVKAALWALQGGTSVVITNGMAGDVITKILEGKKVGTFF 283 (284)
T ss_pred cHHHHHHHHHHHHCCCeEEEEcCCCccHHHHHHcCCCCCEEe
Confidence 999999999999999999999999999999999998899987
No 135
>PRK12314 gamma-glutamyl kinase; Provisional
Probab=100.00 E-value=1e-42 Score=353.24 Aligned_cols=260 Identities=39% Similarity=0.648 Sum_probs=222.0
Q ss_pred HhhhcccceEEEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcCCCcccccCcc
Q 006484 8 RAFVKDVKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQ 87 (643)
Q Consensus 8 ~~~~~~~~~iVIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~~~~~~l~~~~ 87 (643)
|+.+++++++|||||||+++++++.++.+.+.+++++|++++..|+++|||.||+.++|+.+++.+.. +..+.
T Consensus 3 ~~~~~~~~~iViK~Ggs~l~~~~~~~~~~~i~~~~~~I~~~~~~g~~vvlV~Sga~~~g~~~l~~~~~----~~~~~--- 75 (266)
T PRK12314 3 RRQLENAKRIVIKVGSSTLSYENGKINLERIEQLVFVISDLMNKGKEVILVSSGAIGAGLTKLKLDKR----PTSLA--- 75 (266)
T ss_pred hhhHhhCCEEEEEeCCCeeeCCCCCcCHHHHHHHHHHHHHHHHCCCeEEEEeeCcccccceeeccccC----CCCHH---
Confidence 34466678999999999999887788899999999999999999999999877878889876654321 11121
Q ss_pred cchhHHHHHHhchHHHHHHHHHHhccCCCCcceeEecccccCcchhhchHHHHHHHHHhCCCeeEecCCCceeccCCCCC
Q 006484 88 NELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYE 167 (643)
Q Consensus 88 ~~l~~~~~~a~G~~~~~~~~~~~l~~~g~~~~~~~~t~~~~~~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~ 167 (643)
.+++++++||..++.+|...|..+|++++|+++|+++|.++.++.+..+.|+.|+++|+|||+++||.+...+
T Consensus 76 ---~~~a~aa~Gq~~l~~~~~~~~~~~g~~~~q~llT~~~~~~~~~~~~~~~~l~~ll~~g~IPVv~~nd~v~~~~---- 148 (266)
T PRK12314 76 ---EKQALAAVGQPELMSLYSKFFAEYGIVVAQILLTRDDFDSPKSRANVKNTFESLLELGILPIVNENDAVATDE---- 148 (266)
T ss_pred ---HHHHHHHHhHHHHHHHHHHHHHHcCCeEEEEEEecccccchHHHHHHHHHHHHHHHCCCEEEEcCCCCeeecc----
Confidence 2469999999999999999999999999999999999988878888889999999999999999999987632
Q ss_pred CCCceeecchhHHHHHHhhcCCCEEEEeccCCccccCCCC-CCCccceeeeec--ccchhHHhcCCCCCccCCCchHHHH
Q 006484 168 DSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIR--AKHQAEITFGDKSRVGRGGMTAKVN 244 (643)
Q Consensus 168 ~~~~~~~~~D~~A~~lA~~L~Ad~li~lTdVdGVy~~~P~-~p~a~~i~~i~~--~e~~~~~~~g~~~~~~~ggM~~Kl~ 244 (643)
.+..++++|++|+++|.+|+||+|+|+|||||||++||+ +|++++|++|++ ++..+ +..++.+.+++|||.+|++
T Consensus 149 -~~~~~~~~D~~Aa~lA~~l~Ad~liilTDVdGVy~~dP~~~~~a~~i~~I~~~~~~~~~-~~~~~~~~~~tGGM~~Kl~ 226 (266)
T PRK12314 149 -IDTKFGDNDRLSAIVAKLVKADLLIILSDIDGLYDKNPRINPDAKLRSEVTEITEEILA-LAGGAGSKFGTGGMVTKLK 226 (266)
T ss_pred -ccceecchHHHHHHHHHHhCCCEEEEEeCCCcccCCCCCCCCCCeEEEEecCCCHHHHH-HhccCCCCcccCchHHHHH
Confidence 223368999999999999999999999999999999995 899999999985 33333 2333345579999999999
Q ss_pred HHHHHHHcCCcEEEEeCCCcchHHHHHcCCceeeEEecC
Q 006484 245 AAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 283 (643)
Q Consensus 245 aa~~a~~~gv~v~I~~g~~~~~l~~~~~g~~~GT~i~~~ 283 (643)
++..+.+.|++++|+||+.|+.+.++++|+..||+|.+.
T Consensus 227 aa~~a~~~gv~v~I~~g~~~~~i~~~l~g~~~GT~i~~~ 265 (266)
T PRK12314 227 AAKFLMEAGIKMVLANGFNPSDILDFLEGESIGTLFAPK 265 (266)
T ss_pred HHHHHHHCCCeEEEEcCCCchHHHHHHcCCCCceEEccC
Confidence 999999999999999999999999999998899999764
No 136
>PRK13402 gamma-glutamyl kinase; Provisional
Probab=100.00 E-value=5e-42 Score=360.09 Aligned_cols=253 Identities=38% Similarity=0.565 Sum_probs=220.0
Q ss_pred cccceEEEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcCCCcccccCcccchh
Q 006484 12 KDVKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELD 91 (643)
Q Consensus 12 ~~~~~iVIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~~~~~~l~~~~~~l~ 91 (643)
..++++|||+||+++++.++.++.+.+..++++|+.|++.|+++||||||++.+|...++... ++ .+. .
T Consensus 3 ~~~kriVIKiGgs~L~~~~~~l~~~~i~~la~~I~~l~~~G~~vvlVsSGava~G~~~l~~~~----~~-~~~------~ 71 (368)
T PRK13402 3 SNWKRIVVKVGSSLLTPHHQGCSSHYLLGLVQQIVYLKDQGHQVVLVSSGAVAAGYHKLGFID----RP-SVP------E 71 (368)
T ss_pred CCCcEEEEEEchhhccCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCChhhcCccccCCCC----CC-Ccc------H
Confidence 456899999999999987778999999999999999999999999999999888874332111 11 122 3
Q ss_pred HHHHHHhchHHHHHHHHHHhccCCCCcceeEecccccCcchhhchHHHHHHHHHhCCCeeEecCCCceeccCCCCCCCCc
Q 006484 92 GKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSG 171 (643)
Q Consensus 92 ~~~~~a~G~~~~~~~~~~~l~~~g~~~~~~~~t~~~~~~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~~~~ 171 (643)
+++++++||..++..|...|..+|+++.|+++|.+|+.++.+|.+..+++..||+.|+|||+++||++.. ++.
T Consensus 72 ~qalaavGq~~l~~~~~~~f~~~g~~~aqvLlT~~d~~~~~~y~n~~~~l~~LL~~g~IPIinenD~v~~-------~el 144 (368)
T PRK13402 72 KQAMAAAGQGLLMATWSKLFLSHGFPAAQLLLTHGDLRDRERYINIRNTINVLLERGILPIINENDAVTT-------DRL 144 (368)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHCCCeEEEEEEecchhhhHHHHHHHHHHHHHHHHCCcEEEEeCCCcEee-------ccc
Confidence 5799999999999999999999999999999999888776667766789999999999999999999876 455
Q ss_pred eeecchhHHHHHHhhcCCCEEEEeccCCccccCCCC-CCCccceeeeec--ccchhHHhcCCCCCccCCCchHHHHHHHH
Q 006484 172 IFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIR--AKHQAEITFGDKSRVGRGGMTAKVNAAYC 248 (643)
Q Consensus 172 ~~~~~D~~A~~lA~~L~Ad~li~lTdVdGVy~~~P~-~p~a~~i~~i~~--~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~ 248 (643)
.|+|+|++|+.+|.+|+||.|+|+|||||||++||+ +|++++|++|+. +++.. +..++.+.+++|||.+|++++..
T Consensus 145 ~~GdnD~lAa~vA~~l~Ad~LiilTDVdGvy~~dP~~~p~a~~I~~I~~i~~e~~~-l~~~~~s~~gtGGM~~Kl~Aa~~ 223 (368)
T PRK13402 145 KVGDNDNLSAMVAALADADTLIILSDIDGLYDQNPRTNPDAKLIKQVTEINAEIYA-MAGGAGSNVGTGGMRTKIQAAKI 223 (368)
T ss_pred ccCChHHHHHHHHHHhCCCEEEEEecCCeEEeCCCCCCCCCEEEEEeccCcHHHHH-HhcccccCcCcCCchHHHHHHHH
Confidence 679999999999999999999999999999999995 999999999986 44443 44444556899999999999999
Q ss_pred HHHcCCcEEEEeCCCcchHHHHHcCCceeeEEecC
Q 006484 249 AACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 283 (643)
Q Consensus 249 a~~~gv~v~I~~g~~~~~l~~~~~g~~~GT~i~~~ 283 (643)
|.+.|++++|+||+.|+.+.+++.|+..||+|.+.
T Consensus 224 a~~~gi~v~I~~g~~~~~l~~~l~g~~~GT~i~~~ 258 (368)
T PRK13402 224 AMSHGIETFIGNGFTADIFNQLLKGQNPGTYFTPE 258 (368)
T ss_pred HHHcCCcEEEEcCCCchHHHHHhcCCCCceEEecC
Confidence 99999999999999999999999999899999876
No 137
>PTZ00489 glutamate 5-kinase; Provisional
Probab=100.00 E-value=5.5e-41 Score=337.59 Aligned_cols=253 Identities=33% Similarity=0.519 Sum_probs=214.0
Q ss_pred HhhhcccceEEEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcCCCcccccCcc
Q 006484 8 RAFVKDVKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQ 87 (643)
Q Consensus 8 ~~~~~~~~~iVIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~~~~~~l~~~~ 87 (643)
+..+++.+++|||+|||++++++ .++..++..++++|++|++ ++++||||||+...|...++..+ .
T Consensus 2 ~~~~~~~~riVIKlG~Svit~~~-~~~~~~~~~l~~~i~~l~~-~~~vilVssGava~g~~~~~~~~------------~ 67 (264)
T PTZ00489 2 ADILKSVKRIVVKVGSSILVDNQ-EIAAHRIEALCRFIADLQT-KYEVILVTSGAVAAGYTKKEMDK------------S 67 (264)
T ss_pred hhhhhcCCEEEEEeccceeeCCC-CcCHHHHHHHHHHHHHHhc-CCeEEEEecChHhcChhhcCCCc------------c
Confidence 45567789999999999999754 6778889999999999986 79999999998777765332211 0
Q ss_pred cchhHHHHHHhchHHHHHHHHHHhccCCCCcceeEecccccCcchhhchHHHHHHHHHhCCCeeEecCCCceeccCCCCC
Q 006484 88 NELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYE 167 (643)
Q Consensus 88 ~~l~~~~~~a~G~~~~~~~~~~~l~~~g~~~~~~~~t~~~~~~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~ 167 (643)
....+++++++||..++.+|.+.|..+|+.+.|+++|..++.++.++.+..+.++.||+.|+|||++|||.+..
T Consensus 68 ~~~~~qa~aaiGq~~L~~~y~~~f~~~~~~~aqiLlt~~d~~~~~~~~n~~~~l~~lL~~g~VPIinend~~~~------ 141 (264)
T PTZ00489 68 YVPNKQALASMGQPLLMHMYYTELQKHGILCAQMLLAAYDLDSRKRTINAHNTIEVLISHKVIPIINENDATAL------ 141 (264)
T ss_pred ccHHHHHHHHhCHHHHHHHHHHHHHhCCCeEEEeeeeccccccchhhHHHHHHHHHHHHCCCEEEECCCCCccc------
Confidence 11246799999999999999999999999999999999898888888888899999999999999999998875
Q ss_pred CCCceeecchhHHHHHHhhcCCCEEEEeccCCccccCCCC-CCCccc---eeeeecccchhHHhcCCCCCccCCCchHHH
Q 006484 168 DSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKL---IHTYIRAKHQAEITFGDKSRVGRGGMTAKV 243 (643)
Q Consensus 168 ~~~~~~~~~D~~A~~lA~~L~Ad~li~lTdVdGVy~~~P~-~p~a~~---i~~i~~~e~~~~~~~g~~~~~~~ggM~~Kl 243 (643)
.+..|+|+|++|+.+|..++||+|+|+|||||||++||+ +|++++ +++++.++... ..+..+.++||||.+|+
T Consensus 142 -~e~~~gdnD~lAa~lA~~l~Ad~LiilTDVdGVy~~dP~~~~~A~~~~~i~~i~~~~~~~--~~~~~~~~~tGGM~~Kl 218 (264)
T PTZ00489 142 -HELVFGDNDRLSALVAHHFKADLLVILSDIDGYYTENPRTSTDAKIRSVVHELSPDDLVA--EATPNNRFATGGIVTKL 218 (264)
T ss_pred -ceeEeCChHHHHHHHHHHhCCCEEEEeeccCeeEcCCCCCCCccceeeeeccCCHHHHHH--hcCcCCCcccCChHHHH
Confidence 344568999999999999999999999999999999995 889988 55666655432 22344568999999999
Q ss_pred HHHHHHHHcCCcEEEEeCCCcchHHHHHcCC--ceeeEEecC
Q 006484 244 NAAYCAACAGIPVVITSGFAMDSIIKVLEGK--RVGTLFHRD 283 (643)
Q Consensus 244 ~aa~~a~~~gv~v~I~~g~~~~~l~~~~~g~--~~GT~i~~~ 283 (643)
++|..+.++|++++|+||+.|+.+.+++.|+ ..||+|.+.
T Consensus 219 ~aa~~a~~~Gi~v~I~~g~~~~~i~~~l~g~~~~~GT~~~~~ 260 (264)
T PTZ00489 219 QAAQFLLERGGKMYLSSGFHLEKARDFLIGGSHEIGTLFYPR 260 (264)
T ss_pred HHHHHHHHCCCCEEEEeCCCchHHHHHHcCCCCCCceEEeec
Confidence 9999999999999999999999999998764 379999765
No 138
>KOG2455 consensus Delta-1-pyrroline-5-carboxylate dehydrogenase [Amino acid transport and metabolism]
Probab=100.00 E-value=7.9e-41 Score=337.43 Aligned_cols=335 Identities=17% Similarity=0.195 Sum_probs=256.8
Q ss_pred HHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHhchhhHHHHHhhcChhHHHHHH
Q 006484 290 QVGAREMAVAARESSRRLQALQSQDRRKILLDVADALE-ANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLA 368 (643)
Q Consensus 290 ~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~-~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~ 368 (643)
..+|++|+++|.+|++.|..+|..+|.+++.+.|+++. +.+-+|..... ++.+|. .-++.+ ..+.+.+
T Consensus 95 ~k~ie~AIkaAl~a~~~W~~~PiadR~aI~lkAAdlistkyr~~l~aatM--lgqgKt--~~qAei-------Da~~eLi 163 (561)
T KOG2455|consen 95 KKQIEKAIKAALSAQKTWELVPIADRLAIFLKAADLISTKYRYDLLAATM--LGQGKT--AIQAEI-------DAAAELI 163 (561)
T ss_pred HHHHHHHHHHHHhhcCccccCcHHHHHHHHHHHHHHhcchHHHHHHHHHH--hcCCcc--hHHHHH-------HHHHHHH
Confidence 78999999999999999999999999999999999998 55555543221 333332 122211 1233455
Q ss_pred HHHHHHhcccccccccccccccCCCeeEEEEeeee-eeEEEEcCCCch-hHHH-HHHHHHHhCCEEEEeCCcchHHHHHH
Q 006484 369 KSIRILADMEEPIGQILKRTELADGLILEKTSCPL-GVLLIVFESRPD-ALVQ-IASLAIRSGNGLLLKGGKEAMRSNAI 445 (643)
Q Consensus 369 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~Pl-Gvv~~I~p~~P~-~~~~-~~~~AlaaGN~vi~Kps~~tp~t~~~ 445 (643)
+.+|..+..........+.. ...+.+....++|+ |-|++|+|||-. +... ..+||| .||+|++|||..+.+++++
T Consensus 164 df~R~na~ya~eL~~~qpi~-~~~~t~ns~~yRpleGFVaAisPFnftAI~gnLa~aPaL-MGN~VLwkPS~ta~lssYi 241 (561)
T KOG2455|consen 164 DFFRFNAKYASELYAQQPIS-QTKGTWNSMEYRPLEGFVAAISPFNFTAIGGNLAGAPAL-MGNVVLWKPSDTAALSSYI 241 (561)
T ss_pred HHHHHhHHHHHHhhhcCCcc-ccCCCCcceeeccccceeEEecccceeeeccccccChhh-hcceeeecccchhHHHHHH
Confidence 55554432211110001101 12233444568899 999999998653 4333 345666 4999999999999999999
Q ss_pred HHHHHHHhcccc-cCcCceEeec-CcchHhHhhhCCCCccEEEeecCHHHHHHHHHhc---------CCCEEEecCccce
Q 006484 446 LHKVITSAIPDT-VGEKLIGLVT-SREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---------KIPVLGHADGICH 514 (643)
Q Consensus 446 ~~~l~~~a~~~a-lP~g~v~~v~-~~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a---------~~p~~lelGG~~p 514 (643)
+-++++| | +|+|++|.|+ ++...++.+..+|.+.++.||||+.+=|.+-..- --+++.|.||||-
T Consensus 242 i~~il~E----AGlP~GvinFvPad~~~f~dtita~~hfaglnftgS~~~fk~lwk~V~~n~~~Y~~fPrlvgEcgGkNF 317 (561)
T KOG2455|consen 242 IYRILRE----AGLPPGVINFVPADGPLFGDTITASPHFAGLNFTGSVPTFKHLWKKVGENVDNYRTFPRLVGECGGKNF 317 (561)
T ss_pred HHHHHHH----cCCCccceeeccCCCCeecceeccCcccceeeeecccHHHHHHHHHHHhhhhhhhcchhhhccCCCcce
Confidence 9999998 6 9999999999 5777889899999999999999999877664432 2568899999999
Q ss_pred EEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCCE---------------------
Q 006484 515 VYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVG--------------------- 572 (643)
Q Consensus 515 ~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~~--------------------- 572 (643)
-+|.++||++.++...+.++|..+| .|+|.+|+||++++. +.+.++|.++-+++.+.
T Consensus 318 HfVH~SA~VesvV~~TvrsAfey~GQkcsA~SRmYvp~s~w-p~i~e~l~~~~~q~~igd~~~d~~~f~gavIh~~sF~r 396 (561)
T KOG2455|consen 318 HFVHASADVESVVSSTVRSAFEYQGQKCSACSRMYVPESLW-PQIREELVEEHSQLKIGDPVIDFSTFIGAVIHDKSFAR 396 (561)
T ss_pred EEeccccchHHHHHHHHHHHHhhcccccchhhhcccchhhc-HHHHHHHHHHHhhcccCCccccccchhhhhccHHHHHH
Confidence 9999999999999999999999888 999999999999999 89999998877766421
Q ss_pred ----------------EecCc--cccccc--c-C-----CCCccccccccCceEEEEEeC--CHHHHHHHH-HccCCCce
Q 006484 573 ----------------LFGGP--RASKLL--Q-I-----PETRLFHHEYNSMVCTVEIVD--DVRAAIDHI-HQHGSAHT 623 (643)
Q Consensus 573 ----------------~~g~~--~~~~~~--p-v-----~~~~~~~eE~FgPvl~v~~~~--~~deAi~~a-N~~~~GL~ 623 (643)
++||. ...++| | | |.+++|.||+|||||+|+.|+ +++|+++++ |.++|||+
T Consensus 397 l~k~le~ak~~~~leiL~GGk~DdS~G~FV~PTiv~~kdP~~pim~ee~fGPvLsVyvY~Dd~~~E~l~lv~~tt~YaLT 476 (561)
T KOG2455|consen 397 LKKVLEHAKKDPELEILAGGKCDDSTGYFVEPTIVLSKDPKDPIMTEEIFGPVLSVYVYEDDKFDEVLKLVDNTTPYALT 476 (561)
T ss_pred HHHHHHhhccCccceeeecCcccCCCCeeecceEEEccCCCcchhhhhccCceeEEEEeccccHHHHHHHHhcCCcceec
Confidence 12322 112344 5 2 558999999999999999997 478999997 77999999
Q ss_pred eEEEecCHHHHHHHHHhcC
Q 006484 624 DCIVAEDQKVAETFLCQVD 642 (643)
Q Consensus 624 a~v~t~d~~~~~~~~~~l~ 642 (643)
.+||++|.+...+..++++
T Consensus 477 GaiFaqd~~vv~~a~~~Lr 495 (561)
T KOG2455|consen 477 GAIFAQDREVVLHALDVLR 495 (561)
T ss_pred cccccccHHHHHHHHHHHH
Confidence 9999999999888877664
No 139
>PRK05429 gamma-glutamyl kinase; Provisional
Probab=100.00 E-value=1.6e-40 Score=352.24 Aligned_cols=258 Identities=43% Similarity=0.665 Sum_probs=218.6
Q ss_pred HhhhcccceEEEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcCCCcccccCcc
Q 006484 8 RAFVKDVKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQ 87 (643)
Q Consensus 8 ~~~~~~~~~iVIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~~~~~~l~~~~ 87 (643)
+..+++++++|||||||+++++++.++.+.+..++++|+++++.|+++||||||+...+...++ ...++..+.
T Consensus 2 ~~~~~~~~~iVIKiGGs~l~~~~~~l~~~~i~~la~~I~~l~~~g~~vViV~sGai~~g~~~l~----l~~~~~~~~--- 74 (372)
T PRK05429 2 RQALSDARRIVVKVGSSLLTGGGGGLDRARIAELARQIAALRAAGHEVVLVSSGAVAAGRERLG----LPERPKTLA--- 74 (372)
T ss_pred ccchhhCCEEEEEeChhhccCCCCCcCHHHHHHHHHHHHHHHHCCCeEEEEcccHhhhhHhhcC----CCCCCCchH---
Confidence 3456677899999999999988778899999999999999999999999999986444433222 221222222
Q ss_pred cchhHHHHHHhchHHHHHHHHHHhccCCCCcceeEecccccCcchhhchHHHHHHHHHhCCCeeEecCCCceeccCCCCC
Q 006484 88 NELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYE 167 (643)
Q Consensus 88 ~~l~~~~~~a~G~~~~~~~~~~~l~~~g~~~~~~~~t~~~~~~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~ 167 (643)
..++++++||..++..|...|..+|+++.|+++|.+++.++.++.+..+.|..|++.|+|||+++||.+..
T Consensus 75 ---~~qa~aavGq~~L~~~~~~~l~~~gi~~~qil~t~~d~~~~~~~ln~~~~i~~Ll~~g~IPVi~~nd~v~~------ 145 (372)
T PRK05429 75 ---EKQAAAAVGQSRLMQAYEELFARYGITVAQILLTRDDLEDRERYLNARNTLRTLLELGVVPIINENDTVAT------ 145 (372)
T ss_pred ---HHHHHHHHhHHHHHHHHHHHHHHCCCCEEEEEeehhHhhhhhHhhhHHHHHHHHHHCCCEEEEcCCCccce------
Confidence 24589999999999999999999999999999998888766666666789999999999999999998876
Q ss_pred CCCceeecchhHHHHHHhhcCCCEEEEeccCCccccCCCC-CCCccceeeeec--ccchhHHhcCCCCCccCCCchHHHH
Q 006484 168 DSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIR--AKHQAEITFGDKSRVGRGGMTAKVN 244 (643)
Q Consensus 168 ~~~~~~~~~D~~A~~lA~~L~Ad~li~lTdVdGVy~~~P~-~p~a~~i~~i~~--~e~~~~~~~g~~~~~~~ggM~~Kl~ 244 (643)
.+..++|+|++|+.+|.+|+||+|+|+|||||||++||+ +|++++|++|+. +|+.++ ..++.+.+++|||.+|++
T Consensus 146 -~~l~~gd~D~~Aa~lA~~l~Ad~LiilTDVdGVy~~dP~~~p~a~~I~~i~~~~~e~~~~-~~~~~~~~gtGGM~~Kl~ 223 (372)
T PRK05429 146 -DEIKFGDNDTLSALVANLVEADLLILLTDVDGLYTADPRKNPDAKLIPEVEEITDELEAM-AGGAGSGLGTGGMATKLE 223 (372)
T ss_pred -ecccccChHHHHHHHHHHcCCCEEEEecCCCeeEcCCCCCCCCceEEEEeccCCHHHHHH-hcCCCCCcCcCCcHHHHH
Confidence 233469999999999999999999999999999999995 899999999987 456554 334445689999999999
Q ss_pred HHHHHHHcCCcEEEEeCCCcchHHHHHcCCceeeEEecC
Q 006484 245 AAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 283 (643)
Q Consensus 245 aa~~a~~~gv~v~I~~g~~~~~l~~~~~g~~~GT~i~~~ 283 (643)
++..+.++|++++|+||+.|+.+.+++.|+..||+|.+.
T Consensus 224 aa~~a~~~Gi~v~I~~g~~~~~l~~~l~g~~~GT~i~~~ 262 (372)
T PRK05429 224 AARIATRAGIPVVIASGREPDVLLRLLAGEAVGTLFLPQ 262 (372)
T ss_pred HHHHHHHCCCeEEEEcCCCccHHHHHhcCCCCCEEEeeC
Confidence 999999999999999999999999999998899999876
No 140
>cd04242 AAK_G5K_ProB AAK_G5K_ProB: Glutamate-5-kinase (G5K) catalyzes glutamate-dependent ATP cleavage; G5K transfers the terminal phosphoryl group of ATP to the gamma-carboxyl group of glutamate, in the first and controlling step of proline (and, in mammals, ornithine) biosynthesis. G5K is subject to feedback allosteric inhibition by proline or ornithine. In microorganisms and plants, proline plays an important role as an osmoprotectant and, in mammals, ornithine biosynthesis is crucial for proper ammonia detoxification, since a G5K mutation has been shown to cause human hyperammonaemia. Microbial G5K generally consists of two domains: a catalytic G5K domain and one PUA (pseudo uridine synthases and archaeosine-specific transglycosylases) domain, and some lack the PUA domain. G5K requires free Mg for activity, it is tetrameric, and it aggregates to higher forms in a proline-dependent way. G5K lacking the PUA domain remains tetrameric, active, and proline-inhibitable, but the Mg requir
Probab=100.00 E-value=3.7e-40 Score=333.27 Aligned_cols=248 Identities=50% Similarity=0.717 Sum_probs=212.3
Q ss_pred eEEEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcCCCcccccCcccchhHHHH
Q 006484 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKAC 95 (643)
Q Consensus 16 ~iVIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~ 95 (643)
++||||||++++++++.++.+.+.+++++|++++..|+++||||||+.++|+..++... ++..+. ..+++
T Consensus 1 ~iViK~GGs~i~~~~~~~~~~~i~~~~~~i~~~~~~~~~viiV~sg~~~~g~~~~~~~~----~~~~~~------~~~~~ 70 (251)
T cd04242 1 RIVVKVGSSLLTDEDGGLDLGRLASLVEQIAELRNQGKEVILVSSGAVAAGRQRLGLEK----RPKTLP------EKQAL 70 (251)
T ss_pred CEEEEeCCCeeeCCCCCcCHHHHHHHHHHHHHHHHCCCeEEEEecCchhhChhhhccCc----CCCchh------HHHHH
Confidence 58999999999998877788899999999999999999999999998888875433211 111111 23589
Q ss_pred HHhchHHHHHHHHHHhccCCCCcceeEecccccCcchhhchHHHHHHHHHhCCCeeEecCCCceeccCCCCCCCCceeec
Q 006484 96 AAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWD 175 (643)
Q Consensus 96 ~a~G~~~~~~~~~~~l~~~g~~~~~~~~t~~~~~~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~~~~~~~~ 175 (643)
+++||..++.+|...|..+|+++.|+++|+++|.+...+.+..+.|+.|++.|+|||+++||.+.. .+..++|
T Consensus 71 ~~~Gq~~l~~~~~~~l~~~Gi~~~q~l~t~~~~~~~~~~~~~~~~i~~ll~~g~iPVv~~~d~v~~-------~~~~~~~ 143 (251)
T cd04242 71 AAVGQSLLMALYEQLFAQYGIKVAQILLTRDDFEDRKRYLNARNTLETLLELGVIPIINENDTVAT-------EEIRFGD 143 (251)
T ss_pred HHHhHHHHHHHHHHHHHHcCCeEEEEEEehhHhcchHHHHHHHHHHHHHHHCCCEEEEcCCCCeee-------eccccCC
Confidence 999999999999999999999999999998888765555555789999999999999999999876 2233589
Q ss_pred chhHHHHHHhhcCCCEEEEeccCCccccCCCC-CCCccceeeee--cccchhHHhcCCCCCccCCCchHHHHHHHHHHHc
Q 006484 176 NDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYI--RAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACA 252 (643)
Q Consensus 176 ~D~~A~~lA~~L~Ad~li~lTdVdGVy~~~P~-~p~a~~i~~i~--~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~ 252 (643)
+|++|+.+|.+|+||+|+|+|||||||++||+ +|++++|++|+ ++|+.++. .+..+.+++|||.+|++++..+.++
T Consensus 144 ~D~~A~~lA~~l~Ad~liilTDVdGvy~~dP~~~~~a~~i~~i~~~~~e~~~~~-~~~~~~~~tggm~~Kl~a~~~a~~~ 222 (251)
T cd04242 144 NDRLSALVAGLVNADLLILLSDVDGLYDKNPRENPDAKLIPEVEEITDEIEAMA-GGSGSSVGTGGMRTKLKAARIATEA 222 (251)
T ss_pred hHHHHHHHHHHcCCCEEEEecCcCEEEeCCCCCCCCCeEEEEecCChHHHHHHh-cccCcCcccCCcHHHHHHHHHHHHC
Confidence 99999999999999999999999999999996 78999999999 77777543 3344568999999999999999999
Q ss_pred CCcEEEEeCCCcchHHHHHcCCceeeEEe
Q 006484 253 GIPVVITSGFAMDSIIKVLEGKRVGTLFH 281 (643)
Q Consensus 253 gv~v~I~~g~~~~~l~~~~~g~~~GT~i~ 281 (643)
|++++|+||+.|+.+.++++|+..||+|.
T Consensus 223 gi~v~I~~g~~~~~i~~~l~g~~~GT~i~ 251 (251)
T cd04242 223 GIPVVIANGRKPDVLLDILAGEAVGTLFL 251 (251)
T ss_pred CCcEEEEcCCCCCHHHHHHcCCCCCeEeC
Confidence 99999999999999999999988999873
No 141
>TIGR01027 proB glutamate 5-kinase. Bacterial ProB proteins hit the full length of this model, but the ProB-like domain of delta 1-pyrroline-5-carboxylate synthetase does not hit the C-terminal 100 residues of this model. The noise cutoff is set low enough to hit delta 1-pyrroline-5-carboxylate synthetase and other partial matches to this family.
Probab=100.00 E-value=3.4e-40 Score=348.35 Aligned_cols=252 Identities=43% Similarity=0.650 Sum_probs=216.9
Q ss_pred ceEEEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcCCCcccccCcccchhHHH
Q 006484 15 KRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKA 94 (643)
Q Consensus 15 ~~iVIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~~~~~~l~~~~~~l~~~~ 94 (643)
+++|||+|||+++++++.++.+.+..++++|++++++|+++|||||||...+...++ +...+..+. .+++
T Consensus 1 ~riVIKiGgs~l~~~~~~~~~~~i~~la~~I~~l~~~g~~vvlV~sG~~~~g~~~lg----~~~~~~~l~------~~qa 70 (363)
T TIGR01027 1 QRIVVKVGSSSLTGSSGSLDRSHIAELVEQVAALHAAGHEVVIVSSGAIAAGFEALG----LPERPKTLA------EKQA 70 (363)
T ss_pred CeEEEEeccceEeCCCCCcCHHHHHHHHHHHHHHHHCCCeEEEEeCcHHhcCccccC----CCCCccchH------HHHH
Confidence 479999999999998777899999999999999999999999999998766554332 222222222 2469
Q ss_pred HHHhchHHHHHHHHHHhccCCCCcceeEecccccCcchhhchHHHHHHHHHhCCCeeEecCCCceeccCCCCCCCCceee
Q 006484 95 CAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFW 174 (643)
Q Consensus 95 ~~a~G~~~~~~~~~~~l~~~g~~~~~~~~t~~~~~~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~~~~~~~ 174 (643)
++++||..++..|...|..+|+++.|+++|.++|.++.++.+...+|..|+++|+|||+++||.+.. ++..++
T Consensus 71 ~aa~Gq~~l~~~~~~~l~~~Gi~~aqillt~~d~~~~~~~lna~~~i~~Ll~~g~iPVi~end~v~~-------~~l~~g 143 (363)
T TIGR01027 71 LAAVGQVRLMQLYEQLFSQYGIKVAQILLTRADFSDRERYLNARNTLEALLELGVVPIINENDTVAT-------EEIKFG 143 (363)
T ss_pred HHHhChHHHHHHHHHHHHHcCCeEEEEEEeccchhhHHHHHHHHHHHHHHHhCCCEEEEeCCCceee-------eecCcC
Confidence 9999999999999999999999999999999999887777777799999999999999999998875 334568
Q ss_pred cchhHHHHHHhhcCCCEEEEeccCCccccCCCC-CCCccceeeeeccc-chhHHhcCCCCCccCCCchHHHHHHHHHHHc
Q 006484 175 DNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAK-HQAEITFGDKSRVGRGGMTAKVNAAYCAACA 252 (643)
Q Consensus 175 ~~D~~A~~lA~~L~Ad~li~lTdVdGVy~~~P~-~p~a~~i~~i~~~e-~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~ 252 (643)
|+|++|+.+|.+|+||.|+|+|||||||++||+ +|++++|++|+..+ ....+..++.+.+++|||.||++++..|.+.
T Consensus 144 d~D~lAa~lA~~l~Ad~liilTDVdGVy~~dP~~~p~A~~I~~i~~~~~~~~~i~~~~~~~~gtGGM~~Kl~Aa~~a~~~ 223 (363)
T TIGR01027 144 DNDTLSALVAILVGADLLVLLTDVDGLYDADPRTNPDAKLIPVVEEITDLLLGVAGDSGSSVGTGGMRTKLQAADLATRA 223 (363)
T ss_pred ChHHHHHHHHHHcCCCEEEEEeCCCcccCCCCCCCCCCeEEEEeccCcHHHHHhhcCCCcCcCcCCchHHHHHHHHHHHC
Confidence 999999999999999999999999999999995 99999999998643 3334554444568999999999999999999
Q ss_pred CCcEEEEeCCCcchHHHHHcCCceeeEEecC
Q 006484 253 GIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 283 (643)
Q Consensus 253 gv~v~I~~g~~~~~l~~~~~g~~~GT~i~~~ 283 (643)
|++++|+||+.|+.+.+++.|+..||+|.+.
T Consensus 224 gi~v~I~~g~~~~~l~~~l~g~~~GT~i~~~ 254 (363)
T TIGR01027 224 GVPVIIASGSKPEKIADALEGAPVGTLFHAQ 254 (363)
T ss_pred CCeEEEEeCCCccHHHHHhcCCCCcEEEeeC
Confidence 9999999999999999999998899999875
No 142
>KOG4165 consensus Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism]
Probab=100.00 E-value=3.7e-39 Score=314.79 Aligned_cols=351 Identities=61% Similarity=0.926 Sum_probs=322.1
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhchhhHHHHHhhcChhHHHHHHHHHH
Q 006484 293 AREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIR 372 (643)
Q Consensus 293 v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~ 372 (643)
+++..+.||++++..+.++.++|.++|++++++|+.+..+|.+++.+|+..+++.|+.+++..|+.+....++.+...++
T Consensus 2 ~e~~a~~aR~a~r~LqaLs~e~R~~il~~iad~L~~~~~~I~~aN~~Dla~Ake~GL~~sll~RL~l~~~K~~sl~~g~~ 81 (433)
T KOG4165|consen 2 VEEMAENAREAGRILQALSNEDRADILHHIADLLVDNEKEILAANKKDLAEAKEAGLAESLLKRLDLSPGKISSLAAGLR 81 (433)
T ss_pred HHHHHHHHHHHhhHHHhcChhhHHHHHHHHHHHHHhhHHHHHhcchhhHHHHHhcCccHHHHHHhcCChHHHHHHHHHHH
Confidence 35667889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcccccccccccccccCCCeeEEEEeeeeeeEEEEcCCCchhHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHH
Q 006484 373 ILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITS 452 (643)
Q Consensus 373 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~~P~~~~~~~~~AlaaGN~vi~Kps~~tp~t~~~~~~l~~~ 452 (643)
.++++++|+|+........++...+.+..|+||.++|+...|.......+.|+++||.+++|....+..+...+.+++++
T Consensus 82 ~ia~~edpvGRVl~~~~ladgL~L~qvt~PiGvLLVIFESRPd~l~qiasLAi~SgN~llLKGGkEa~~Sn~~L~~~v~~ 161 (433)
T KOG4165|consen 82 QIAELEDPVGRVLKKTRLADGLELEQVTVPIGVLLVIFESRPDCLPQIASLAIASGNGLLLKGGKEAAHSNAALHKLVQE 161 (433)
T ss_pred HHHhcccchhhheeeeeccCCceEEEeeccceEEEEEeccCchHHHHHHHHHHhcCCeEeecCchhhhhhHHHHHHHHHH
Confidence 99999999998765444567888999999999999999999987777778899999999999999999999999999999
Q ss_pred hcccc-cCcCceEeecCcchHhHhhhCCCCccEEEeecCHHHHHHHHHhcCCCEEEecCccceEEEcCCCCHHHHHHHHH
Q 006484 453 AIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVI 531 (643)
Q Consensus 453 a~~~a-lP~g~v~~v~~~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a~~p~~lelGG~~p~iV~~dAdl~~A~~~iv 531 (643)
|+.+. .|.+.+|+|++++++.++|..+..||+|...||+...|.|..++++||+..--|.+.+||++|||+++|.+...
T Consensus 162 al~~~~~~~~aV~LV~sREev~dLl~ld~~IDLvIPRGSs~LVr~Ik~~tkIPVLGHA~GichvYvd~dad~~kA~riv~ 241 (433)
T KOG4165|consen 162 ALGTHGGPGKAVQLVTSREEVSDLLKLDDYIDLVIPRGSSDLVRSIKDTTKIPVLGHAEGICHVYVDKDADLDKAKRIVR 241 (433)
T ss_pred HhhhccCchhhhhheecHHHHHHHhhhhhheeEEecCCcHHHHHHHhhcccCcccccccceeEEEeccccCHHHHHHHHh
Confidence 99888 89999999999999999999999999999999999999998888899999999999999999999999999999
Q ss_pred hhcCCCCCccccceeEEEcCccCCchhHHHHHHHHHHcCCEEecCccccccccC--CCCccccccccCceEEEEEeCCHH
Q 006484 532 DAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLQI--PETRLFHHEYNSMVCTVEIVDDVR 609 (643)
Q Consensus 532 ~~~~~n~g~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~~~~g~~~~~~~~pv--~~~~~~~eE~FgPvl~v~~~~~~d 609 (643)
.++..+.-.|+|.+-++||++.....|.+.+...++..|+++.++|+...++.+ |...-|+.|+-.-.+++-.+++.+
T Consensus 242 DaK~dYPAaCNAmETLLIh~dl~~~~~~~~l~~~l~~~gVtl~agpkl~~~l~~~p~e~~s~~~Ey~~l~~~ievV~~v~ 321 (433)
T KOG4165|consen 242 DAKCDYPAACNAMETLLIHKDLEQSPFFDDLINMLKEEGVTLHAGPKLAALLKFSPPEAKSFNTEYGSLECTIEVVDSVQ 321 (433)
T ss_pred cccCCCchhhhhHHHHhccHhhhhcchHHHHHHHHHhcCeEEecChhHHhhcCcCCchhhhhhhhhcchheeeeecccHH
Confidence 999998889999999999998431589999999999999999988865444323 345678889988899999999999
Q ss_pred HHHHHHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 610 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 610 eAi~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
+||+.+|.++.+|+-+|.|+|.+.|++|.+.+|+
T Consensus 322 ~Ai~HI~~hgS~HTD~IvTe~~~~Ae~Fl~~VDS 355 (433)
T KOG4165|consen 322 SAIDHIHTHGSSHTDCIVTENEATAEHFLKHVDS 355 (433)
T ss_pred HHHHHHHhcCCcccceEEecCHHHHHHHHhccch
Confidence 9999999999999999999999999999998875
No 143
>COG0548 ArgB Acetylglutamate kinase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.8e-35 Score=291.61 Aligned_cols=242 Identities=24% Similarity=0.326 Sum_probs=188.1
Q ss_pred ccceEEEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcCCCccc-ccCcc---c
Q 006484 13 DVKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLAD-LQKPQ---N 88 (643)
Q Consensus 13 ~~~~iVIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~~~~~~-l~~~~---~ 88 (643)
++|++|||+||+++.+++ .+++++++|+.|+..|.++||||||||++++.+.+ .++++.|.+ ++.+. +
T Consensus 1 ~~k~~VIK~GG~~~~~~~------l~~~~~~di~lL~~~G~~~VvVHGggp~I~~~l~~--~gie~~f~~glRvTd~~tl 72 (265)
T COG0548 1 RGKTIVIKLGGSAMEDEN------LLEAFASDIALLKSVGIRPVVVHGGGPQIDEMLAK--LGIEPEFVKGLRVTDAETL 72 (265)
T ss_pred CCceEEEEECceeecCch------HHHHHHHHHHHHHHCCCcEEEEeCCchHHHHHHHH--cCCCCeeeCCEEcCCHHHH
Confidence 358999999999999864 36899999999999999999999999999998744 466766654 44443 3
Q ss_pred chhHHHHHHhchHHHHHHHHHHhccCCCCcceeEeccccc-----------Ccchhh----chHHHHHHHHHhCCCeeEe
Q 006484 89 ELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDF-----------RDEDFR----KQLYDTVQSLLDLRVIPIF 153 (643)
Q Consensus 89 ~l~~~~~~a~G~~~~~~~~~~~l~~~g~~~~~~~~t~~~~-----------~~~~~~----~~~~~~i~~ll~~g~iPVv 153 (643)
++..+++ .|+... .+...|..+|..+..+...++++ .+.+++ .++++.|+.++++|+|||+
T Consensus 73 evv~mvl--~G~vNk--~iva~l~~~g~~avGlsg~Dg~li~A~~~~~~~~id~g~vG~i~~Vn~~~i~~ll~~~~IpVi 148 (265)
T COG0548 73 EVVEMVL--GGTVNK--EIVARLSKHGGQAVGLSGVDGNLVTAKKLDVDDGVDLGYVGEIRKVNPELIERLLDNGAIPVI 148 (265)
T ss_pred HHHHHHH--HHHHHH--HHHHHHHHhCCcceeeeecCCCEEEEEEcccccccccceeeeEEEECHHHHHHHHhCCCceEE
Confidence 3333333 234332 23355555555443332222111 112222 2578999999999999999
Q ss_pred cCCCceeccCCCCCCCCcee-ecchhHHHHHHhhcCCCEEEEeccCCccccCCCCCCCccceeeeecccchhHHhcCCCC
Q 006484 154 NENDAVSTRKAPYEDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKS 232 (643)
Q Consensus 154 ~g~d~v~~~~~~~~~~~~~~-~~~D~~A~~lA~~L~Ad~li~lTdVdGVy~~~P~~p~a~~i~~i~~~e~~~~~~~g~~~ 232 (643)
+ |+ +.+.+|..| +|+|++|+.+|.+|+|++|+++|||+|||+++| +| .+|++++.+|+++++..+
T Consensus 149 a------pi--a~~~~G~~~NvnaD~~A~~iA~aLkAekLi~ltdv~Gvl~~~~-~~--s~i~~~~~~~~~~li~~~--- 214 (265)
T COG0548 149 A------PI--AVDEDGETLNVNADTAAGALAAALKAEKLILLTDVPGVLDDKG-DP--SLISELDAEEAEELIEQG--- 214 (265)
T ss_pred e------cc--eECCCCcEEeeCHHHHHHHHHHHcCCCeEEEEeCCcccccCCC-Cc--eeeccCCHHHHHHHHhcC---
Confidence 4 53 344577778 999999999999999999999999999999865 44 599999999999988765
Q ss_pred CccCCCchHHHHHHHHHHHcCCc-EEEEeCCCcchH-HHHHcCCceeeEEe
Q 006484 233 RVGRGGMTAKVNAAYCAACAGIP-VVITSGFAMDSI-IKVLEGKRVGTLFH 281 (643)
Q Consensus 233 ~~~~ggM~~Kl~aa~~a~~~gv~-v~I~~g~~~~~l-~~~~~g~~~GT~i~ 281 (643)
.++|||+||+++|..|+++|++ |||+||+.++.+ .++|++..+||.+.
T Consensus 215 -~i~~GMi~Kv~~a~~A~~~Gv~~v~ii~g~~~~~ll~eLFt~~giGT~i~ 264 (265)
T COG0548 215 -IITGGMIPKVEAALEALESGVRRVHIISGRVPHSLLLELFTRDGIGTMIV 264 (265)
T ss_pred -CccCccHHHHHHHHHHHHhCCCeEEEecCCCcchHHHHHhcCCCcceEec
Confidence 7899999999999999999997 999999999996 88999999999875
No 144
>TIGR00746 arcC carbamate kinase. The seed alignment for this model includes experimentally confirmed examples from a set of phylogenetically distinct species. In a neighbor-joining tree constructed from an alignment of candidate carbamate kinases and several acetylglutamate kinases, the latter group forms a clear outgroup which roots the tree of carbamate kinase-like proteins. This analysis suggests that in E. coli, the ArcC paralog YqeA may be a second isozyme, while the paralog YahI branches as an outlier and is less likely to be an authentic carbamate kinase. The homolog from Mycoplasma pneumoniae likewise branches outside the set containing known carbamate kinases and also scores below the trusted cutoff.
Probab=100.00 E-value=1.4e-33 Score=288.92 Aligned_cols=243 Identities=22% Similarity=0.325 Sum_probs=190.7
Q ss_pred ceEEEEeCCcccccCCC----ccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcCCCcccccCcccch
Q 006484 15 KRLVVKVGTAVVTRSDG----RLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNEL 90 (643)
Q Consensus 15 ~~iVIKlGGs~l~~~~~----~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~~~~~~l~~~~~~l 90 (643)
|+||||+||++|.++++ ..+.++++.++++|+.|++.|+++|||||||+++|...++..... ..+...
T Consensus 1 ~riViklGgnaL~~~g~~~~~~~~~~~i~~~a~~ia~l~~~g~~vviv~gngpqvG~~~l~~~~~~----~~~~~~---- 72 (310)
T TIGR00746 1 KRVVVALGGNALLQRGEKGSAEAQRDNVRQTAPQIAKLIKRGYELVITHGNGPQVGNLLLQNQAAD----SEVPAM---- 72 (310)
T ss_pred CeEEEEECHHHhCCCCCCCCcchhHHHHHHHHHHHHHHHHCCCEEEEEECChHHHHHHHhcccccc----ccCCCC----
Confidence 58999999999997532 255789999999999999999999999999999998776533211 111111
Q ss_pred hHHHHHHhchHHHHHHHHHHhc----cCCC------CcceeEecccc--cCcchhh------------------------
Q 006484 91 DGKACAAVGQSSLMALYDTLFS----QLDV------TSSQLLVTDSD--FRDEDFR------------------------ 134 (643)
Q Consensus 91 ~~~~~~a~G~~~~~~~~~~~l~----~~g~------~~~~~~~t~~~--~~~~~~~------------------------ 134 (643)
..+++.+.||..++..|+..|. .+|+ ...|++++.+| |.+...+
T Consensus 73 p~~~~~A~~qg~lg~~~~~~l~~~l~~~g~~~~v~~~vtqv~v~~~D~af~~p~k~ig~~y~~~~a~~~~~~~~~~~~~d 152 (310)
T TIGR00746 73 PLDVLGAMSQGMIGYMLQQALNNELPKRGMEKPVATVLTQTIVDPKDPAFQNPTKPIGPFYTEEEAKRLAAEKGWIVKED 152 (310)
T ss_pred cchHHHHhhHHHHHHHHHHHHHHHHHhcCCCccceEEEEEEEECCCcccccCCCCcCCCCcCHHHHHHHHHHcCCeEeec
Confidence 1258899999998888888887 6663 24577777666 5332221
Q ss_pred ----------------chHHHHHHHHHhCCC---------eeEecCCCceeccCCCCCCCCceeecchhHHHHHHhhcCC
Q 006484 135 ----------------KQLYDTVQSLLDLRV---------IPIFNENDAVSTRKAPYEDSSGIFWDNDSLAGLLALELKA 189 (643)
Q Consensus 135 ----------------~~~~~~i~~ll~~g~---------iPVv~g~d~v~~~~~~~~~~~~~~~~~D~~A~~lA~~L~A 189 (643)
.++.+.|+.||++|. +||+++||.+...+ .++|+|++|+.+|.+|+|
T Consensus 153 ~~~~~rrvv~sp~p~~iv~~~~I~~LL~~G~iVI~~ggggiPvi~e~~~~~g~e--------~~id~D~lAa~lA~~l~A 224 (310)
T TIGR00746 153 AGRGWRRVVPSPRPKDIVEAETIKTLVENGVIVISSGGGGVPVVLEGAELKGVE--------AVIDKDLASEKLAEEVNA 224 (310)
T ss_pred CCCcceEeecCCCchhhccHHHHHHHHHCCCEEEeCCCCCcCEEecCCeEEeeE--------ecCCHHHHHHHHHHHhCC
Confidence 145789999999999 67777666554311 248999999999999999
Q ss_pred CEEEEeccCCccccCCCCCCCccceeeeecccchhHHhcCCCCCccCCCchHHHHHHHHHHHcC-CcEEEEeCCCcchHH
Q 006484 190 DLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAG-IPVVITSGFAMDSII 268 (643)
Q Consensus 190 d~li~lTdVdGVy~~~P~~p~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~g-v~v~I~~g~~~~~l~ 268 (643)
|+|+|+|||||||+++ ++|++++|++++.+|+.+++.. +.+++|||.+|+++|..+++.| .+++|++ ++.+.
T Consensus 225 D~LIiLTDVdGVy~~~-~~p~a~~i~~it~~e~~~~~~~---g~~~tGgM~~Kl~AA~~~~~~g~~~v~I~~---~~~i~ 297 (310)
T TIGR00746 225 DILVILTDVDAVYINY-GKPDEKALREVTVEELEDYYKA---GHFAAGSMGPKVEAAIEFVESGGKRAIITS---LENAV 297 (310)
T ss_pred CEEEEEeCCCceeCCC-CCCCCcCCcCcCHHHHHHHHhc---CCcCCCCcHHHHHHHHHHHHhCCCeEEEec---hHHHH
Confidence 9999999999999974 5789999999999988876643 3588999999999999888875 5699998 78889
Q ss_pred HHHcCCceeeEEe
Q 006484 269 KVLEGKRVGTLFH 281 (643)
Q Consensus 269 ~~~~g~~~GT~i~ 281 (643)
+++.|+ .||+|.
T Consensus 298 ~~l~G~-~GT~I~ 309 (310)
T TIGR00746 298 EALEGK-AGTRVT 309 (310)
T ss_pred HHHCCC-CCcEEe
Confidence 999998 899875
No 145
>PRK12353 putative amino acid kinase; Reviewed
Probab=100.00 E-value=2.5e-33 Score=289.72 Aligned_cols=256 Identities=21% Similarity=0.286 Sum_probs=191.3
Q ss_pred ccceEEEEeCCcccccCCCc--cCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcCCCcccccCcccch
Q 006484 13 DVKRLVVKVGTAVVTRSDGR--LALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNEL 90 (643)
Q Consensus 13 ~~~~iVIKlGGs~l~~~~~~--~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~~~~~~l~~~~~~l 90 (643)
+++++|||+||++|+++++. ++.+++..++++|+.|++.|+++||||||++++|+.+.+.... ..+.. .... +
T Consensus 1 ~~~~iVIklGG~~L~~~~~~~~~~~~~i~~la~~Ia~l~~~G~~vvlV~Gg~~~~G~~~~~~~~~--~~~~~-~~~~--~ 75 (314)
T PRK12353 1 MMKKIVVALGGNALGSTPEEATAQLEAVKKTAKSLVDLIEEGHEVVITHGNGPQVGNILLAQEAA--ASEKN-KVPA--M 75 (314)
T ss_pred CCcEEEEEECHHHhCCCCCCCcccHHHHHHHHHHHHHHHHCCCEEEEEeCCchHhCHHHhcCccc--cccCC-CCCC--c
Confidence 35899999999999998753 8899999999999999999999999999999999986553221 11111 1111 1
Q ss_pred hHHHHHHhchH----HHHHHHHHHhccCCC------CcceeEecccccC--cc---------------------------
Q 006484 91 DGKACAAVGQS----SLMALYDTLFSQLDV------TSSQLLVTDSDFR--DE--------------------------- 131 (643)
Q Consensus 91 ~~~~~~a~G~~----~~~~~~~~~l~~~g~------~~~~~~~t~~~~~--~~--------------------------- 131 (643)
..+++++.+|. .++..|+..|..+|+ ...|++++.+|+. ..
T Consensus 76 ~~~~~~a~~qg~l~~~l~~~~~~~l~~~~~~~~~~~~v~q~ll~~~d~~f~~~~~p~g~~~~~~~~~~~~~~~g~~~~~~ 155 (314)
T PRK12353 76 PLDVCGAMSQGYIGYHLQNALRNELLKRGIDKPVATVVTQVVVDANDPAFKNPTKPIGPFYTEEEAEKLAKEKGYTFKED 155 (314)
T ss_pred hhHHHHHHHhHHHHHHHHHHHHHHHHhcCCCcccceEEEEEEEcCCcccccCCCccccccccHHHHHHhhhhcCceeeec
Confidence 12356666666 344578899998888 4567777766522 20
Q ss_pred -h-hhc-----------hHHHHHHHHHhCCCeeEecCCCceeccCCCCCCCC-ceeecchhHHHHHHhhcCCCEEEEecc
Q 006484 132 -D-FRK-----------QLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSS-GIFWDNDSLAGLLALELKADLLVLLSD 197 (643)
Q Consensus 132 -~-~~~-----------~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~~~-~~~~~~D~~A~~lA~~L~Ad~li~lTd 197 (643)
+ .+. ++.+.|+.||++|+|||++|...+......+...+ ..++|+|++|+++|.+|+||+|+|+||
T Consensus 156 ~~~~~r~~v~sp~p~~~v~~~~i~~lL~~g~IpV~~g~gg~Pi~~~~~~~~~~~~~~d~D~lAa~lA~~l~Ad~Li~lTd 235 (314)
T PRK12353 156 AGRGYRRVVPSPKPVDIVEIEAIKTLVDAGQVVIAAGGGGIPVIREGGGLKGVEAVIDKDFASAKLAELVDADLLIILTA 235 (314)
T ss_pred CCceeEeccCCCCccccccHHHHHHHHHCCCEEEEcCCCCCCEEEeCCceeeeeEecCHHHHHHHHHHHhCCCEEEEEeC
Confidence 1 121 35799999999999999987322221100000001 125999999999999999999999999
Q ss_pred CCccccCCCCCCCccceeeeecccchhHHhcCCCCCccCCCchHHHHHHHHHH--HcCCcEEEEeCCCcchHHHHHcCCc
Q 006484 198 VEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAA--CAGIPVVITSGFAMDSIIKVLEGKR 275 (643)
Q Consensus 198 VdGVy~~~P~~p~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~--~~gv~v~I~~g~~~~~l~~~~~g~~ 275 (643)
|||||++|| +|++++|++|+.+++.+++.. +.+++|||.+|+++|..++ +.|++|+|++ ++.+.+++.|+
T Consensus 236 vdGVy~~~~-~~~a~~i~~i~~~e~~~~~~~---~~~~tGGM~~Kl~aA~~a~~~~~g~~v~I~~---~~~i~~~l~g~- 307 (314)
T PRK12353 236 VDKVYINFG-KPNQKKLDEVTVSEAEKYIEE---GQFAPGSMLPKVEAAISFVESRPGRKAIITS---LEKAKEALEGK- 307 (314)
T ss_pred CccccCCCC-CCCCeECcCcCHHHHHHHHhc---CCcCCCCcHHHHHHHHHHHHHcCCCEEEECC---chHHHHHhCCC-
Confidence 999999766 689999999999888876643 2478999999999999988 6688899998 77888888887
Q ss_pred eeeEEe
Q 006484 276 VGTLFH 281 (643)
Q Consensus 276 ~GT~i~ 281 (643)
.||+|.
T Consensus 308 ~GT~i~ 313 (314)
T PRK12353 308 AGTVIV 313 (314)
T ss_pred CCeEec
Confidence 799885
No 146
>cd04241 AAK_FomA-like AAK_FomA-like: This CD includes a fosfomycin biosynthetic gene product, FomA, and similar proteins found in a wide range of organisms. Together, the fomA and fomB genes in the fosfomycin biosynthetic gene cluster of Streptomyces wedmorensis confer high-level fosfomycin resistance. FomA and FomB proteins converted fosfomycin to fosfomycin monophosphate and fosfomycin diphosphate in the presence of ATP and a magnesium ion, indicating that FomA and FomB catalyzed phosphorylations of fosfomycin and fosfomycin monophosphate, respectively. FomA and related sequences in this CD are members of the Amino Acid Kinase Superfamily (AAK).
Probab=100.00 E-value=3.6e-33 Score=283.27 Aligned_cols=243 Identities=23% Similarity=0.346 Sum_probs=180.4
Q ss_pred eEEEEeCCcccccCCC--ccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcCCCcccccCcccchhHH
Q 006484 16 RLVVKVGTAVVTRSDG--RLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGK 93 (643)
Q Consensus 16 ~iVIKlGGs~l~~~~~--~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 93 (643)
++|||+||++++++++ .++.+.+++++++|++++ |+++|||||||++ ++..+..+ ++.++.+..+...+..
T Consensus 1 ~iVIKiGGs~l~~~~~~~~~~~~~l~~l~~~l~~l~--g~~vvlVhGgg~~-~~~~~~~~-g~~~g~~~~~~~~l~~--- 73 (252)
T cd04241 1 MIILKLGGSVITDKDRPETIREENLERIARELAEAI--DEKLVLVHGGGSF-GHPKAKEY-GLPDGDGSFSAEGVAE--- 73 (252)
T ss_pred CEEEEEeceEEEcCCCCCccCHHHHHHHHHHHHhcc--CCCEEEEECCCcc-cCHHHHHh-CCCcCCCchhhhhHHH---
Confidence 4899999999998643 578888999999999887 9999999988775 55444322 2322111111111111
Q ss_pred HHHHhchHHHHHHHHHHhccCCCCcce-----eEecccccCcchhhchHHHHHHHHHhCCCeeEecCCCceeccCCCCCC
Q 006484 94 ACAAVGQSSLMALYDTLFSQLDVTSSQ-----LLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYED 168 (643)
Q Consensus 94 ~~~a~G~~~~~~~~~~~l~~~g~~~~~-----~~~t~~~~~~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~ 168 (643)
...++ ..+...+.+.|...|+++.. ++.+.. ...+.++.+.++.++++|+|||++| |.+...
T Consensus 74 ~~~~~--~~ln~~~~~~l~~~g~~a~~l~~~~~~~~~~----g~~~~~~~~~l~~ll~~g~iPVi~~-~~~~~~------ 140 (252)
T cd04241 74 THEAM--LELNSIVVDALLEAGVPAVSVPPSSFFVTEN----GRIVSFDLEVIKELLDRGFVPVLHG-DVVLDE------ 140 (252)
T ss_pred HHHHH--HHHHHHHHHHHHHCCCCeEEEChHHeEEecC----CeeeeecHHHHHHHHhCCCEEEEcC-CeEecC------
Confidence 11112 23444566778788877653 333321 1223456889999999999999997 554431
Q ss_pred CCce-eecchhHHHHHHhhcCCCEEEEeccCCccccCCCCCCCccceeeeecccchhHHhc-CCCCCccCCCchHHHHHH
Q 006484 169 SSGI-FWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITF-GDKSRVGRGGMTAKVNAA 246 (643)
Q Consensus 169 ~~~~-~~~~D~~A~~lA~~L~Ad~li~lTdVdGVy~~~P~~p~a~~i~~i~~~e~~~~~~~-g~~~~~~~ggM~~Kl~aa 246 (643)
++.. ++|+|++|+.+|.+|+||+|+|+|||||||++|| |++++|++|+.+++++++.. ++.+.+++|||.+|+++|
T Consensus 141 ~~~~~~~~~D~~A~~lA~~l~A~~li~ltdv~Gv~~~~P--~~~~~i~~i~~~~~~~~~~~~~~~~~~~tGGm~~Kl~aa 218 (252)
T cd04241 141 GGGITILSGDDIVVELAKALKPERVIFLTDVDGVYDKPP--PDAKLIPEIDVGSLEDILAALGSAGTDVTGGMAGKIEEL 218 (252)
T ss_pred CCCeEEeChHHHHHHHHHHcCCCEEEEEeCCCeeECCCC--CCCeEcceeCccchHHHHHhcCcCCccccCCHHHHHHHH
Confidence 2333 4999999999999999999999999999999999 88999999999888776542 222357899999999999
Q ss_pred HHHHHcCCcEEEEeCCCcchHHHHHcCCceeeEE
Q 006484 247 YCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLF 280 (643)
Q Consensus 247 ~~a~~~gv~v~I~~g~~~~~l~~~~~g~~~GT~i 280 (643)
..++++|++++|+||+.++.+.++++|+..||++
T Consensus 219 ~~a~~~Gv~v~I~~g~~~~~l~~~l~g~~~GT~i 252 (252)
T cd04241 219 LELARRGIEVYIFNGDKPENLYRALLGNFIGTRI 252 (252)
T ss_pred HHHHhcCCeEEEEeCCCHHHHHHHHcCCCCceEC
Confidence 9999999999999999999999999998889974
No 147
>CHL00202 argB acetylglutamate kinase; Provisional
Probab=100.00 E-value=8.2e-32 Score=276.30 Aligned_cols=245 Identities=19% Similarity=0.271 Sum_probs=179.7
Q ss_pred ccceEEEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcCCCccc-ccCcccc-h
Q 006484 13 DVKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLAD-LQKPQNE-L 90 (643)
Q Consensus 13 ~~~~iVIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~~~~~~-l~~~~~~-l 90 (643)
+++++|||+||+++.++. ..+.++++|+.|+..|.++|||||||+++.+.+.+ .++++.|.+ ++.+... +
T Consensus 22 ~~~~~VIk~gG~~~~~~~------l~~~~~~di~~l~~~g~~~VlVHGgg~~i~~~~~~--~g~~~~~~~G~rvT~~~~l 93 (284)
T CHL00202 22 RGRIMVIKYGGAAMKNLI------LKADIIKDILFLSCIGLKIVVVHGGGPEINFWLKQ--LNISPKFWNGIRVTDKVTM 93 (284)
T ss_pred cCCeEEEEEChHHhcCcc------hHHHHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHH--CCCCCEeECCcccCCHHHH
Confidence 358999999999997643 23689999999999999999999999988775532 345544433 3333311 1
Q ss_pred hHHHHHHhchHHHHHHHHHHhccCCCCcceeEeccc-----------ccCcchh-hchHHHHHHHHHhCCCeeEecCCCc
Q 006484 91 DGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDS-----------DFRDEDF-RKQLYDTVQSLLDLRVIPIFNENDA 158 (643)
Q Consensus 91 ~~~~~~a~G~~~~~~~~~~~l~~~g~~~~~~~~t~~-----------~~~~~~~-~~~~~~~i~~ll~~g~iPVv~g~d~ 158 (643)
.-..+...|+... .+...|.+.|+++..+...+. ++...+. ...+.+.|+.++++|+|||+++
T Consensus 94 ~~~~~~l~g~ln~--~lv~~L~~~Gv~av~l~~~d~~~i~a~~~~~~d~~~~G~i~~v~~~~i~~ll~~g~iPVi~~--- 168 (284)
T CHL00202 94 EIVEMVLAGKVNK--DLVGSINANGGKAVGLCGKDANLIVARASDKKDLGLVGEIQQVDPQLIDMLLEKNYIPVIAS--- 168 (284)
T ss_pred HHHHHHHhhHHHH--HHHHHHHhCCCCeeeeeeccCCEEEEEeCCCcccccceeEEecCHHHHHHHHHCCCEEEECC---
Confidence 1011122343332 334667777776554322111 2222222 2256899999999999999974
Q ss_pred eeccCCCCCCCCcee-ecchhHHHHHHhhcCCCEEEEeccCCccccCCCCCCCccceeeeecccchhHHhcCCCCCccCC
Q 006484 159 VSTRKAPYEDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRG 237 (643)
Q Consensus 159 v~~~~~~~~~~~~~~-~~~D~~A~~lA~~L~Ad~li~lTdVdGVy~~~P~~p~a~~i~~i~~~e~~~~~~~g~~~~~~~g 237 (643)
++.+..+..+ +|+|++|+.+|.+|+||+|+|+|||||||+++ .+| +++|++++++|+++++..+ +++|
T Consensus 169 -----~~~~~~g~~~ni~~D~~A~~lA~~l~Ad~li~lTdv~Gv~~~~-~d~-~~~i~~i~~~e~~~l~~~g----~~tG 237 (284)
T CHL00202 169 -----VAADHDGQTYNINADVVAGEIAAKLNAEKLILLTDTPGILADI-NDP-NSLISTLNIKEARNLASTG----IISG 237 (284)
T ss_pred -----CccCCCCcEEecCHHHHHHHHHHHhCCCEEEEEeCChhhcCCC-CCC-CCccccccHHHHHHHHhcC----CCCC
Confidence 1122345556 89999999999999999999999999999853 244 4799999999988776543 7899
Q ss_pred CchHHHHHHHHHHHcCCc-EEEEeCCCcchH-HHHHcCCceeeEEe
Q 006484 238 GMTAKVNAAYCAACAGIP-VVITSGFAMDSI-IKVLEGKRVGTLFH 281 (643)
Q Consensus 238 gM~~Kl~aa~~a~~~gv~-v~I~~g~~~~~l-~~~~~g~~~GT~i~ 281 (643)
||.+|+++|..++++|++ +||++|+.++.+ .++++++..||.|.
T Consensus 238 GM~~Kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~g~GT~i~ 283 (284)
T CHL00202 238 GMIPKVNCCIRALAQGVEAAHIIDGKEKHALLLEILTEKGIGSMLV 283 (284)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCCCCChHHHHHhcCCCCceEEe
Confidence 999999999999999998 999999999975 99999999999874
No 148
>cd04237 AAK_NAGS-ABP AAK_NAGS-ABP: N-acetylglutamate (NAG) kinase-like domain of the NAG Synthase (NAGS) of the arginine-biosynthesis pathway (ABP) found in gamma- and beta-proteobacteria and higher plant chloroplasts. Domain architecture of these NAGS consisted of an N-terminal NAG kinase-like (ArgB) domain (this CD) and a C-terminal NAG synthase, acetyltransferase (ArgA) domain. Both bacterial and plant sequences in this CD have a conserved N-terminal extension; a similar sequence in the NAG kinases of the cyclic arginine-biosynthesis pathway has been implicated in feedback inhibition sensing. Plant sequences also have an N-terminal chloroplast transit peptide and an insert (approx. 70 residues) in the C-terminal region of ArgB. Members of this CD belong to the Amino Acid Kinase Superfamily (AAK).
Probab=100.00 E-value=9.5e-32 Score=275.01 Aligned_cols=242 Identities=21% Similarity=0.293 Sum_probs=176.3
Q ss_pred cceEEEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcCCCccc-ccCcccchhH
Q 006484 14 VKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLAD-LQKPQNELDG 92 (643)
Q Consensus 14 ~~~iVIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~~~~~~-l~~~~~~l~~ 92 (643)
++++|||+||+++.+++ ++.++++|+.|++.|+++|||||||+++++.+.+ .++++.+.+ ++.+..+...
T Consensus 18 ~~~~VIKlGG~ai~~~~-------l~~~~~~ia~l~~~g~~~ViVHGggp~i~~~~~~--~gi~~~~~~G~RvT~~~~l~ 88 (280)
T cd04237 18 GKTFVIAFGGEAVAHPN-------FDNIVHDIALLHSLGIRLVLVHGARPQIDQRLAE--RGLEPRYHRGLRITDAAALE 88 (280)
T ss_pred CCEEEEEEChHHhcCch-------HHHHHHHHHHHHHCCCcEEEEeCCCHHHHHHHHH--cCCCccccCCcCcCCHHHHH
Confidence 47999999999998653 6899999999999999999999999999997643 455555543 3444322211
Q ss_pred HHHHHhchHHH--HHHHHHHhccCCCCcceeEeccc--------------ccCcchhh-chHHHHHHHHHhCCCeeEecC
Q 006484 93 KACAAVGQSSL--MALYDTLFSQLDVTSSQLLVTDS--------------DFRDEDFR-KQLYDTVQSLLDLRVIPIFNE 155 (643)
Q Consensus 93 ~~~~a~G~~~~--~~~~~~~l~~~g~~~~~~~~t~~--------------~~~~~~~~-~~~~~~i~~ll~~g~iPVv~g 155 (643)
-...+.|+... .+.+...+...+++...+...++ ++...|.. ..+.+.|+.+|++|++||+.+
T Consensus 89 ~~~~~~g~v~~~l~~~l~~~~~a~~~~~~~~~~~~~~~v~~~~~~~~~~~~~g~~G~v~~v~~~~i~~lL~~g~ipv~~~ 168 (280)
T cd04237 89 CVKEAAGAVRLEIEALLSMGLPNSPMAGARIRVVSGNFVTARPLGVVDGVDFGHTGEVRRIDADAIRRQLDQGSIVLLSP 168 (280)
T ss_pred HHHHHHHHHHHHHHHHHHhhccccCcCCCceEEecCeEEEEEECCcccCceEeeeccEEEEcHHHHHHHHHCCCEEEECC
Confidence 12222344432 22233334333333212211111 11112221 246899999999999999963
Q ss_pred CCceeccCCCCCCCCcee-ecchhHHHHHHhhcCCCEEEEeccCCccccCCCCCCCccceeeeecccchhHHhcCCCCCc
Q 006484 156 NDAVSTRKAPYEDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRV 234 (643)
Q Consensus 156 ~d~v~~~~~~~~~~~~~~-~~~D~~A~~lA~~L~Ad~li~lTdVdGVy~~~P~~p~a~~i~~i~~~e~~~~~~~g~~~~~ 234 (643)
. ++..+|..+ +|+|.+|+.+|.+|+|++|+|+|||||||+++ +++|++|+.+|+++++..+. .
T Consensus 169 ------~--g~~~~g~~lnvnaD~~A~~LA~~L~a~klv~ltdv~GV~~~~-----~~~i~~i~~~e~~~l~~~~~---~ 232 (280)
T cd04237 169 ------L--GYSPTGEVFNLSMEDVATAVAIALKADKLIFLTDGPGLLDDD-----GELIRELTAQEAEALLETGA---L 232 (280)
T ss_pred ------c--eECCCCCEEeeCHHHHHHHHHHHcCCCEEEEEeCCCcccCCC-----CCccccCCHHHHHHHHHcCC---C
Confidence 2 233355556 89999999999999999999999999999752 68999999999998887652 3
Q ss_pred cCCCchHHHHHHHHHHHcCCc-EEEEeCCCcchH-HHHHcCCceeeEE
Q 006484 235 GRGGMTAKVNAAYCAACAGIP-VVITSGFAMDSI-IKVLEGKRVGTLF 280 (643)
Q Consensus 235 ~~ggM~~Kl~aa~~a~~~gv~-v~I~~g~~~~~l-~~~~~g~~~GT~i 280 (643)
.+|||+||+++|..+++.|++ +||++++.|+.+ .++++.+..||.+
T Consensus 233 ~~ggM~~Kv~~a~~a~~~Gv~~v~I~~~~~~~~ll~elft~~g~GT~i 280 (280)
T cd04237 233 LTNDTARLLQAAIEACRGGVPRVHLISYAEDGALLLELFTRDGVGTLI 280 (280)
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHhcCCCCCCcC
Confidence 499999999999999999996 999999999998 7788888889864
No 149
>PRK12352 putative carbamate kinase; Reviewed
Probab=99.98 E-value=3.3e-31 Score=271.70 Aligned_cols=257 Identities=18% Similarity=0.223 Sum_probs=182.8
Q ss_pred cceEEEEeCCcccccCCCcc----CHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcCCCcccccCcccc
Q 006484 14 VKRLVVKVGTAVVTRSDGRL----ALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNE 89 (643)
Q Consensus 14 ~~~iVIKlGGs~l~~~~~~~----~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~~~~~~l~~~~~~ 89 (643)
.|++||||||+++.+++... +.+++..++++|+.|+..|+++|||||||||++..+.+ .++.+.|..++.+...
T Consensus 2 ~k~iVI~lGGnAl~~~~~~~~~~~~~~~~~~~a~dia~l~~~G~~lVivHG~GPqI~~~l~~--~~~~~~~~g~rvt~~~ 79 (316)
T PRK12352 2 KELVVVAIGGNSIIKDNASQSIEHQAEAVKAVADTVLEMLASDYDIVLTHGNGPQVGLDLRR--AEIAHEREGLPLTPLA 79 (316)
T ss_pred CcEEEEEEChHHhcCCCCCcchhhHHHHHHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHH--cCcccccCCCCCCCHH
Confidence 47999999999997643221 23678999999999999999999999999999998754 3445455334444322
Q ss_pred hhHHHHHHhchHH--HHHHHHHHhccCCCCc-----ceeEec--cccc-------------------------------C
Q 006484 90 LDGKACAAVGQSS--LMALYDTLFSQLDVTS-----SQLLVT--DSDF-------------------------------R 129 (643)
Q Consensus 90 l~~~~~~a~G~~~--~~~~~~~~l~~~g~~~-----~~~~~t--~~~~-------------------------------~ 129 (643)
.....+.|..+ +...+...|...|... .|+.++ +++| .
T Consensus 80 --~~v~~~~g~i~~~i~~~L~~~l~~~g~~~~~~vvt~v~vs~~D~~f~~~~kpiG~~y~~~~a~~~~~~~~~~~~~~d~ 157 (316)
T PRK12352 80 --NCVADTQGGIGYLIQQALNNRLARHGEKKAVTVVTQVEVDKNDPGFAHPTKPIGAFFSESQRDELQKANPDWRFVEDA 157 (316)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeEEEEEEEECCCCccccCCcccccCcccHHHHHHHhhhcCCceEeecC
Confidence 12333443222 2345567777666221 122222 1222 1
Q ss_pred cchhh----------chHHHHHHHHHhCCCeeEecCCCceeccC-CCCCCCCcee-ecchhHHHHHHhhcCCCEEEEecc
Q 006484 130 DEDFR----------KQLYDTVQSLLDLRVIPIFNENDAVSTRK-APYEDSSGIF-WDNDSLAGLLALELKADLLVLLSD 197 (643)
Q Consensus 130 ~~~~~----------~~~~~~i~~ll~~g~iPVv~g~d~v~~~~-~~~~~~~~~~-~~~D~~A~~lA~~L~Ad~li~lTd 197 (643)
.++++ .++.+.|+.|+++|+|+|..|+.++.... ..+...+..+ +|+|.+|+.+|.+|+||+|+|+||
T Consensus 158 g~G~rrvv~sp~pv~~V~~~~I~~ll~~g~iVi~~ggggiPv~~~~~g~~~n~~~nInaD~aAa~iA~aL~AdkLI~LTD 237 (316)
T PRK12352 158 GRGYRRVVASPEPKRIVEAPAIKALIQQGFVVIGAGGGGIPVVRTDAGDYQSVDAVIDKDLSTALLAREIHADILVITTG 237 (316)
T ss_pred CCCeEEecCCCCCceEEcHHHHHHHHHCCCEEEecCCCCCCEEeCCCCCccCceeeecHHHHHHHHHHHhCCCEEEEEeC
Confidence 12222 25789999999999996665444433210 0011122334 999999999999999999999999
Q ss_pred CCccccCCCCCCCccceeeeecccchhHHhcCCCCCccCCCchHHHHHHHHHHHcCCc-EEEEeCCCcchHHHHHcCCce
Q 006484 198 VEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIP-VVITSGFAMDSIIKVLEGKRV 276 (643)
Q Consensus 198 VdGVy~~~P~~p~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gv~-v~I~~g~~~~~l~~~~~g~~~ 276 (643)
|+|||.+++ +|++++|++++.+|+++++..| ....|||.||+++|..+++.|+. +||++ ++.+.++++|+ .
T Consensus 238 V~GV~~d~~-~~~~~li~~lt~~e~~~li~~g---~i~~GgM~pKl~aA~~al~~Gv~~v~I~~---~~~i~~al~g~-~ 309 (316)
T PRK12352 238 VEKVCIHFG-KPQQQALDRVDIATMTRYMQEG---HFPPGSMLPKIIASLTFLEQGGKEVIITT---PECLPAALRGE-T 309 (316)
T ss_pred chhhccCCC-CCCcccccccCHHHHHHHHhcC---CcCCCCCHHHHHHHHHHHHhCCCeEEEcc---hHHHHHHHcCC-C
Confidence 999998865 5778899999999999888654 24479999999999999999987 99997 78899999987 8
Q ss_pred eeEEec
Q 006484 277 GTLFHR 282 (643)
Q Consensus 277 GT~i~~ 282 (643)
||.+..
T Consensus 310 GT~I~~ 315 (316)
T PRK12352 310 GTHIIK 315 (316)
T ss_pred CeEEEe
Confidence 898864
No 150
>PLN02512 acetylglutamate kinase
Probab=99.98 E-value=3.4e-31 Score=274.50 Aligned_cols=245 Identities=21% Similarity=0.266 Sum_probs=179.3
Q ss_pred ccceEEEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcCCCccc-ccCcccchh
Q 006484 13 DVKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLAD-LQKPQNELD 91 (643)
Q Consensus 13 ~~~~iVIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~~~~~~-l~~~~~~l~ 91 (643)
+++++||||||+++++++ ....++++|+.|+..|.++|||||||+++...+.. .++.+++.+ ++.++....
T Consensus 46 ~~~tiVIKlGGs~i~d~~------~~~~~~~di~~l~~~g~~iVlVHGgG~~i~~~~~~--~gi~~~~~~G~rvT~~~~l 117 (309)
T PLN02512 46 RGKTVVVKYGGAAMKDPE------LKAGVIRDLVLLSCVGLRPVLVHGGGPEINSWLKK--VGIEPQFKNGLRVTDAETM 117 (309)
T ss_pred CCCeEEEEECCeeccChh------HHHHHHHHHHHHHHCCCCEEEEECCcHHHHHHHHH--cCCCCcCCCCCcCCCHHHH
Confidence 468999999999998864 24679999999999999999999999977664432 244444433 333321110
Q ss_pred HH-HHHHhchHHHHHHHHHHhccCCCCcceeEe------ccc------ccCcchh-hchHHHHHHHHHhCCCeeEecCCC
Q 006484 92 GK-ACAAVGQSSLMALYDTLFSQLDVTSSQLLV------TDS------DFRDEDF-RKQLYDTVQSLLDLRVIPIFNEND 157 (643)
Q Consensus 92 ~~-~~~a~G~~~~~~~~~~~l~~~g~~~~~~~~------t~~------~~~~~~~-~~~~~~~i~~ll~~g~iPVv~g~d 157 (643)
.. .+..+|+.. ..+...|.+.|+++..+.. +.. ++...+. ...+.+.|+.+++.|+|||+++ .
T Consensus 118 ei~~~~l~g~ln--~~lv~~L~~~Gv~av~l~g~d~~~i~a~~~~~~~~~~~~G~i~~v~~~~i~~lL~~g~IPVi~~-~ 194 (309)
T PLN02512 118 EVVEMVLVGKVN--KSLVSLINKAGGTAVGLSGKDGRLLRARPSPNSADLGFVGEVTRVDPTVLRPLVDDGHIPVIAT-V 194 (309)
T ss_pred HHHHHHHhhHHH--HHHHHHHHHcCCCeEEeehhhCCEEEEEEcCcCccccccceeeecCHHHHHHHHhCCCEEEEeC-c
Confidence 00 111233332 2345777788877654421 211 2222222 2256899999999999999986 2
Q ss_pred ceeccCCCCCCCCcee-ecchhHHHHHHhhcCCCEEEEeccCCccccCCCCCCCccceeeeecccchhHHhcCCCCCccC
Q 006484 158 AVSTRKAPYEDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGR 236 (643)
Q Consensus 158 ~v~~~~~~~~~~~~~~-~~~D~~A~~lA~~L~Ad~li~lTdVdGVy~~~P~~p~a~~i~~i~~~e~~~~~~~g~~~~~~~ 236 (643)
++ +..+..+ +|+|++|+++|.+|+||+|+|+|||||||+++| +++++|++|+++|+.+++..+ +++
T Consensus 195 ~~-------d~~g~~~~i~~D~~A~~lA~~L~Ad~li~lTdV~GV~~~~~--~~~~lI~~i~~~e~~~l~~~~----~vt 261 (309)
T PLN02512 195 AA-------DEDGQAYNINADTAAGEIAAALGAEKLILLTDVAGVLEDKD--DPGSLVKELDIKGVRKLIADG----KIA 261 (309)
T ss_pred eE-------CCCCCEeccCHHHHHHHHHHHcCCCEEEEEeCCcceeCCCC--CCcCCCcccCHHHHHHHHhCC----CCC
Confidence 21 1234445 899999999999999999999999999998754 337899999999988766543 789
Q ss_pred CCchHHHHHHHHHHHcCCc-EEEEeCCCcchH-HHHHcCCceeeEEe
Q 006484 237 GGMTAKVNAAYCAACAGIP-VVITSGFAMDSI-IKVLEGKRVGTLFH 281 (643)
Q Consensus 237 ggM~~Kl~aa~~a~~~gv~-v~I~~g~~~~~l-~~~~~g~~~GT~i~ 281 (643)
|||.+|+++|..+++.|++ |+|++|..++.+ .++++++..||+|.
T Consensus 262 GGM~~Kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~~l~~~~~~GT~I~ 308 (309)
T PLN02512 262 GGMIPKVECCVRSLAQGVKTAHIIDGRVPHSLLLEILTDEGAGTMIT 308 (309)
T ss_pred CcHHHHHHHHHHHHHcCCCEEEEecCCCCChHHHHHhcCCCCeeEEe
Confidence 9999999999999999997 999999999887 67888888999885
No 151
>PRK12686 carbamate kinase; Reviewed
Probab=99.97 E-value=4.8e-31 Score=268.42 Aligned_cols=256 Identities=22% Similarity=0.306 Sum_probs=179.0
Q ss_pred ccceEEEEeCCcccccCCC--ccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcCCCcccccCcccch
Q 006484 13 DVKRLVVKVGTAVVTRSDG--RLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNEL 90 (643)
Q Consensus 13 ~~~~iVIKlGGs~l~~~~~--~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~~~~~~l~~~~~~l 90 (643)
|++++|||+||+++.+++. ....++++.++++|+.|.+.|+++||+||+|||+|..+++... ..+.+ ...++|
T Consensus 1 ~~~~iVialGGnAl~~~~~~~~~q~~~~~~~a~~ia~l~~~g~~~vi~HGnGPQVg~~~~~~~~-~~~~~----~~~~pl 75 (312)
T PRK12686 1 MKEKIVIALGGNAILQTEATAEAQQTAVREAAQHLVDLIEAGHDIVITHGNGPQVGNLLLQQAE-SNSNK----VPAMPL 75 (312)
T ss_pred CCCEEEEEcChHhhCCCCCChHHHHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHh-ccccC----CCCCCh
Confidence 3579999999999987552 2345688999999999999999999999999999976653221 11111 112333
Q ss_pred hHHHHHHhchHHHH--HHHHHHhccCCCCc------ceeEecccc--c----------------------------C--c
Q 006484 91 DGKACAAVGQSSLM--ALYDTLFSQLDVTS------SQLLVTDSD--F----------------------------R--D 130 (643)
Q Consensus 91 ~~~~~~a~G~~~~~--~~~~~~l~~~g~~~------~~~~~t~~~--~----------------------------~--~ 130 (643)
.-....+-|..+.+ +.+.+.|..++... .|+++..+| | . .
T Consensus 76 ~~~~a~sqg~iGy~~~q~l~~~l~~r~~~~~v~~vvtqv~Vd~~d~af~~ptk~ig~~~~~~~a~~~~~~~g~~~~~d~~ 155 (312)
T PRK12686 76 DTCVAMSQGMIGYWLQNALNNELTERGIDKPVITLVTQVEVDKDDPAFANPTKPIGPFYTEEEAKQQAEQPGSTFKEDAG 155 (312)
T ss_pred hhhhhhccchhhHHHHHHHHHHHHhcCCCCCceEEEEEEEECCCChhhcCCCCCccCccCHHHHHHHHHHcCCcccccCC
Confidence 33344555555542 34556665544321 122221111 0 0 1
Q ss_pred chhhc----------hHHHHHHHHHhCCCeeEecCCCceeccCCCCCCCCce-eecchhHHHHHHhhcCCCEEEEeccCC
Q 006484 131 EDFRK----------QLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI-FWDNDSLAGLLALELKADLLVLLSDVE 199 (643)
Q Consensus 131 ~~~~~----------~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~~~~~-~~~~D~~A~~lA~~L~Ad~li~lTdVd 199 (643)
+++++ ++.+.|+.|+++|+|||.+|+-++....-.+...+.. ++|+|.+|+.||.+|+||+|+|+||||
T Consensus 156 ~G~rrvV~sP~P~~ive~~~I~~Ll~~G~IpI~~GgggIPVv~~~~~~~gv~avid~D~~Aa~LA~~L~Ad~LIiLTDVd 235 (312)
T PRK12686 156 RGYRRVVPSPKPQEIIEHDTIRTLVDGGNIVIACGGGGIPVIRDDNTLKGVEAVIDKDFASEKLAEQIDADLLIILTGVE 235 (312)
T ss_pred CCeEEeeCCCCCccccCHHHHHHHHHCCCEEEEeCCCCCCeEecCCcEEeeecccCccHHHHHHHHHcCCCEEEEEeCch
Confidence 13322 4578999999999999987743322110000001222 589999999999999999999999999
Q ss_pred ccccCCCCCCCccceeeeecccchhHHhcCCCCCccCCCchHHHHHHHHHHHcC--CcEEEEeCCCcchHHHHHcCCcee
Q 006484 200 GLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAG--IPVVITSGFAMDSIIKVLEGKRVG 277 (643)
Q Consensus 200 GVy~~~P~~p~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~g--v~v~I~~g~~~~~l~~~~~g~~~G 277 (643)
|||++ |.+|++++|++|+.+|+.+++..+ .+.+|||.||+++|..++++| .+++|++ ++.+.+++.|+ .|
T Consensus 236 GVy~~-~~~p~ak~I~~I~~~e~~~li~~g---~~~tGGM~pKveAA~~av~~g~g~~viI~~---~~~i~~aL~G~-~G 307 (312)
T PRK12686 236 NVFIN-FNKPNQQKLDDITVAEAKQYIAEG---QFAPGSMLPKVEAAIDFVESGEGKKAIITS---LEQAKEALAGN-AG 307 (312)
T ss_pred hhccC-CCCCCCeECCccCHHHHHHHhhCC---CccCCCcHHHHHHHHHHHHhCCCCEEEEeC---chHHHHHhCCC-CC
Confidence 99996 557889999999999998877653 477899999999999999864 5688887 67788888887 79
Q ss_pred eEEe
Q 006484 278 TLFH 281 (643)
Q Consensus 278 T~i~ 281 (643)
|+|.
T Consensus 308 T~I~ 311 (312)
T PRK12686 308 THIT 311 (312)
T ss_pred eEEe
Confidence 9874
No 152
>PRK00942 acetylglutamate kinase; Provisional
Probab=99.97 E-value=6.5e-31 Score=270.76 Aligned_cols=240 Identities=22% Similarity=0.290 Sum_probs=179.2
Q ss_pred cceEEEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcCCCcc-cccCcc---cc
Q 006484 14 VKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLA-DLQKPQ---NE 89 (643)
Q Consensus 14 ~~~iVIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~~~~~-~l~~~~---~~ 89 (643)
++++||||||+++++++ .+..++++|+.|++.|.++|||||||+++...+.. .+..+++. .+..++ ++
T Consensus 23 ~~~iViK~GGs~l~~~~------~~~~l~~~i~~l~~~g~~vVlVhGgg~~~~~~~~~--~g~~~~~~~g~~~t~~~~l~ 94 (283)
T PRK00942 23 GKTIVIKYGGNAMTDEE------LKEAFARDIVLLKQVGINPVVVHGGGPQIDELLKK--LGIESEFVNGLRVTDAETME 94 (283)
T ss_pred CCeEEEEEChHHhcCcc------hHHHHHHHHHHHHHCCCCEEEEeCChHHHHHHHHH--CCCCcEeeCCEecCCHHHHH
Confidence 57999999999998865 36789999999999999999999999977665422 22322222 122222 11
Q ss_pred hhHHHHHHhchHHHHHHHHHHhccCCCCcceeE------eccccc------Ccchh-hchHHHHHHHHHhCCCeeEecCC
Q 006484 90 LDGKACAAVGQSSLMALYDTLFSQLDVTSSQLL------VTDSDF------RDEDF-RKQLYDTVQSLLDLRVIPIFNEN 156 (643)
Q Consensus 90 l~~~~~~a~G~~~~~~~~~~~l~~~g~~~~~~~------~t~~~~------~~~~~-~~~~~~~i~~ll~~g~iPVv~g~ 156 (643)
+.. + +..|+.. ..+...|.++|+++.++. ++...+ ...+. ...+.+.|+.+|++|.|||+++
T Consensus 95 ~~~-~-a~~G~l~--~~i~~~L~~~Gv~a~~l~~~~~~~~ta~~~~~~~~~~~~g~i~~i~~~~l~~ll~~g~vpVv~~- 169 (283)
T PRK00942 95 VVE-M-VLAGKVN--KELVSLINKHGGKAVGLSGKDGGLITAKKLEEDEDLGFVGEVTPVNPALLEALLEAGYIPVISP- 169 (283)
T ss_pred HHH-H-HHcCchH--HHHHHHHHhCCCCccceeeccCCEEEEEECCCCCCCccccceEEECHHHHHHHHHCCCEEEEcC-
Confidence 111 1 2226443 245578888888766543 332222 11122 2245899999999999999974
Q ss_pred CceeccCCCCCCCCcee-ecchhHHHHHHhhcCCCEEEEeccCCccccCCCCCCCccceeeeecccchhHHhcCCCCCcc
Q 006484 157 DAVSTRKAPYEDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVG 235 (643)
Q Consensus 157 d~v~~~~~~~~~~~~~~-~~~D~~A~~lA~~L~Ad~li~lTdVdGVy~~~P~~p~a~~i~~i~~~e~~~~~~~g~~~~~~ 235 (643)
+ +.+.++..+ +|+|++|+.+|.+|+|++|+|+|||||||+++ +++|++|+++|+.++... .++
T Consensus 170 --~-----~~~~~g~~~~l~~D~~A~~lA~~l~A~~li~~tdv~Gv~~~~-----~~~i~~i~~~e~~~~~~~----~~~ 233 (283)
T PRK00942 170 --I-----GVGEDGETYNINADTAAGAIAAALGAEKLILLTDVPGVLDDK-----GQLISELTASEAEELIED----GVI 233 (283)
T ss_pred --c-----EECCCCcEEEECHHHHHHHHHHHcCCCEEEEEECCcccccCC-----CcccccCCHHHHHHHHHc----CCC
Confidence 1 122244444 99999999999999999999999999999873 789999999999876654 378
Q ss_pred CCCchHHHHHHHHHHHcCCc-EEEEeCCCcch-HHHHHcCCceeeEEec
Q 006484 236 RGGMTAKVNAAYCAACAGIP-VVITSGFAMDS-IIKVLEGKRVGTLFHR 282 (643)
Q Consensus 236 ~ggM~~Kl~aa~~a~~~gv~-v~I~~g~~~~~-l~~~~~g~~~GT~i~~ 282 (643)
+|||.+|+++|..++++|++ |+|+||+.++. |.++++++..||.|.+
T Consensus 234 tggm~~Kl~~a~~~~~~gv~~v~I~~g~~~~~ll~~~~~~~~~GT~i~~ 282 (283)
T PRK00942 234 TGGMIPKVEAALDAARGGVRSVHIIDGRVPHALLLELFTDEGIGTMIVP 282 (283)
T ss_pred CCchHHHHHHHHHHHHhCCCEEEEeCCCCCchHHHHHhcCCCcceEEec
Confidence 99999999999999999986 99999999999 7899999999999875
No 153
>COG1608 Predicted archaeal kinase [General function prediction only]
Probab=99.97 E-value=1.2e-30 Score=248.37 Aligned_cols=244 Identities=22% Similarity=0.316 Sum_probs=174.0
Q ss_pred EEEEeCCcccccCCC--ccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcCCCcccccC-cccchhHH
Q 006484 17 LVVKVGTAVVTRSDG--RLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQK-PQNELDGK 93 (643)
Q Consensus 17 iVIKlGGs~l~~~~~--~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~~~~~~l~~-~~~~l~~~ 93 (643)
+|+|||||+||+|+. ..+.+++++++.+|+. ..-.++|||||| +++||..++.+.. +...+... .-..+...
T Consensus 3 ~IlKlGGSvITdK~~p~t~r~~~l~ria~eI~~--~~~~~livVHGg-GSFGHp~Ak~~~~--~~~~~~~s~~G~~~~~~ 77 (252)
T COG1608 3 IILKLGGSVITDKDKPRTVREDRLRRIAREISN--GKPEKLIVVHGG-GSFGHPAAKEFGL--EGLKNYLSPLGFSLTHL 77 (252)
T ss_pred EEEEecceeeecCCCcchhhHHHHHHHHHHHhc--CCcccEEEEecC-ccccCHHHHHhCc--cccccccCccchHHHHH
Confidence 899999999999976 4567788888888875 222378899977 5699988765542 11112100 00011112
Q ss_pred HHHHhchHHHHHHHHHHhccCCCCcceeEe-cccccCcchhhchHHHHHHHHHhCCCeeEecCCCceeccCCCCCCCCce
Q 006484 94 ACAAVGQSSLMALYDTLFSQLDVTSSQLLV-TDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI 172 (643)
Q Consensus 94 ~~~a~G~~~~~~~~~~~l~~~g~~~~~~~~-t~~~~~~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~~~~~ 172 (643)
++.. +.....+.|...|+.+..... +.--+..+..+. ..+.+..+++.|++||++| |++...+ .+..
T Consensus 78 am~~-----L~~~V~~~l~~~Gv~av~~~P~s~~~~~gr~~~~-~l~~i~~~l~~gfvPvl~G-DVv~d~~-----~g~~ 145 (252)
T COG1608 78 AMLE-----LNSIVVDALLDAGVRAVSVVPISFSTFNGRILYT-YLEAIKDALEKGFVPVLYG-DVVPDDD-----NGYE 145 (252)
T ss_pred HHHH-----HHHHHHHHHHhcCCccccccCcceeecCCceeec-hHHHHHHHHHcCCEeeeec-ceEEcCC-----CceE
Confidence 2222 222334556666665532110 000111111111 2578999999999999999 8887632 3556
Q ss_pred eecchhHHHHHHhhcCCCEEEEeccCCccccCCCC-CCCccceeeeecccchhHHhcCCCCCccCCCchHHHHHHHHHHH
Q 006484 173 FWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAAC 251 (643)
Q Consensus 173 ~~~~D~~A~~lA~~L~Ad~li~lTdVdGVy~~~P~-~p~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~ 251 (643)
++|+|.++.++|..|++|+++|+|||||||+.||+ .|+.+.++++..... ..|+.+.++||||..|++++.+..+
T Consensus 146 IiSGDdIv~~LA~~l~pd~v~f~tdVdGVy~~~p~~~p~~~~l~~i~~~~~----~~gs~~~DVTGGi~~Kl~~~~~~~~ 221 (252)
T COG1608 146 IISGDDIVLHLAKELKPDRVIFLTDVDGVYDRDPGKVPDARLLSEIEGRVA----LGGSGGTDVTGGIAKKLEALLEIAR 221 (252)
T ss_pred EEeccHHHHHHHHHhCCCEEEEEecCCceecCCCCcCccccchhhhhhhhh----hcCcCcccchhhHHHHHHHHHHHHh
Confidence 79999999999999999999999999999999994 888888777744311 2355557999999999999999999
Q ss_pred cCCcEEEEeCCCcchHHHHHcCCceeeEEe
Q 006484 252 AGIPVVITSGFAMDSIIKVLEGKRVGTLFH 281 (643)
Q Consensus 252 ~gv~v~I~~g~~~~~l~~~~~g~~~GT~i~ 281 (643)
++.+|+|+||..|++|..++.|+.+||.+.
T Consensus 222 ~~~~vyi~ng~~~~ni~~~l~G~~vGT~I~ 251 (252)
T COG1608 222 YGKEVYIFNGNKPENIYRALRGENVGTRID 251 (252)
T ss_pred cCceEEEECCCCHHHHHHHhcCCCCceEec
Confidence 999999999999999999999999999875
No 154
>PRK14058 acetylglutamate/acetylaminoadipate kinase; Provisional
Probab=99.97 E-value=9.8e-31 Score=266.75 Aligned_cols=236 Identities=25% Similarity=0.279 Sum_probs=170.2
Q ss_pred eEEEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcCCCccc------ccCcccc
Q 006484 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLAD------LQKPQNE 89 (643)
Q Consensus 16 ~iVIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~~~~~~------l~~~~~~ 89 (643)
++||||||+++.++ +.++++|+.+++.|.++|||||||+++.+.+ .. .+++++|.+ ++.+...
T Consensus 1 ~~ViK~GG~~l~~~---------~~~~~~i~~l~~~g~~~VlVHGgg~~i~~~~-~~-~gi~~~~~~~~~g~~~rvt~~~ 69 (268)
T PRK14058 1 MIVVKIGGSVGIDP---------EDALIDVASLWADGERVVLVHGGSDEVNELL-ER-LGIEPRFVTSPSGVTSRYTDRE 69 (268)
T ss_pred CEEEEEChHHhhCc---------HHHHHHHHHHHHCCCCEEEEeCCHHHHHHHH-HH-cCCCceEEeCCCCCceEeCCHH
Confidence 58999999999874 3679999999999999999999988777654 32 345555433 2222211
Q ss_pred hhHHHHHHhchHHHHHHHHHHhccCCCCccee------Eeccc----------------ccCcchh-hchHHHHHHHHHh
Q 006484 90 LDGKACAAVGQSSLMALYDTLFSQLDVTSSQL------LVTDS----------------DFRDEDF-RKQLYDTVQSLLD 146 (643)
Q Consensus 90 l~~~~~~a~G~~~~~~~~~~~l~~~g~~~~~~------~~t~~----------------~~~~~~~-~~~~~~~i~~ll~ 146 (643)
-......++++... .+...|.+.|+++..+ +++.. |+...+. ...+.+.|+.+++
T Consensus 70 ~l~~~~~a~~~ln~--~lv~~L~~~Gv~a~~l~~~~~~l~~~~~~~~~~~~~~g~~~~~d~g~~g~v~~v~~~~i~~ll~ 147 (268)
T PRK14058 70 TLEVFIMAMALINK--QLVERLQSLGVNAVGLSGLDGGLLEGKRKKAVRVVEEGKKKIIRGDYTGKIEEVNTDLLKLLLK 147 (268)
T ss_pred HHHHHHHHHHHHHH--HHHHHHHhCCCCccccCcccCCEEEEEEecccccccCCcceeccCCceeEEEEECHHHHHHHHH
Confidence 11112334453222 2335666666654322 11100 1111112 2245789999999
Q ss_pred CCCeeEecCCCceeccCCCCCCCCcee-ecchhHHHHHHhhcCCCEEEEeccCCccccCCCCCCCccceeeeecccchhH
Q 006484 147 LRVIPIFNENDAVSTRKAPYEDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAE 225 (643)
Q Consensus 147 ~g~iPVv~g~d~v~~~~~~~~~~~~~~-~~~D~~A~~lA~~L~Ad~li~lTdVdGVy~~~P~~p~a~~i~~i~~~e~~~~ 225 (643)
+|+|||+++ .++. ..+..+ +|+|++|+.+|.+|+||+|+|+|||||||++||+ ++++|++|+.+|+.++
T Consensus 148 ~g~iPVi~~-~~~~-------~~g~~~~i~~D~~A~~lA~~l~A~~li~ltdv~Gv~~~~p~--~~~~i~~i~~~e~~~l 217 (268)
T PRK14058 148 AGYLPVVAP-PALS-------EEGEPLNVDGDRAAAAIAGALKAEALVLLSDVPGLLRDPPD--EGSLIERITPEEAEEL 217 (268)
T ss_pred CCCEEEEeC-ceEC-------CCCcEEecCHHHHHHHHHHHcCCCEEEEEeCChhhccCCCC--CCcCccCcCHHHHHHH
Confidence 999999986 2221 134444 9999999999999999999999999999999882 3679999999888765
Q ss_pred HhcCCCCCccCCCchHHHHHHHHHHHcCCc-EEEEeCCCcchHHHHHcCCceeeEEec
Q 006484 226 ITFGDKSRVGRGGMTAKVNAAYCAACAGIP-VVITSGFAMDSIIKVLEGKRVGTLFHR 282 (643)
Q Consensus 226 ~~~g~~~~~~~ggM~~Kl~aa~~a~~~gv~-v~I~~g~~~~~l~~~~~g~~~GT~i~~ 282 (643)
+. +++|||.+|+++|..++++|++ ++|+||+.|+.+...+.|. ||.|.+
T Consensus 218 ~~------~~tGgM~~Kl~aa~~a~~~Gv~~v~I~~g~~~~~l~~~l~G~--GT~I~~ 267 (268)
T PRK14058 218 SK------AAGGGMKKKVLMAAEAVEGGVGRVIIADANVDDPISAALAGE--GTVIVN 267 (268)
T ss_pred hh------ccCCccHHHHHHHHHHHHcCCCEEEEEcCCCcchHHHHhCCC--ceEEec
Confidence 43 5799999999999999999995 9999999999998888774 999864
No 155
>PRK12454 carbamate kinase-like carbamoyl phosphate synthetase; Reviewed
Probab=99.97 E-value=2.9e-30 Score=262.01 Aligned_cols=251 Identities=22% Similarity=0.354 Sum_probs=180.4
Q ss_pred cceEEEEeCCcccccCCCc----cCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcCCCcccccCcccc
Q 006484 14 VKRLVVKVGTAVVTRSDGR----LALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNE 89 (643)
Q Consensus 14 ~~~iVIKlGGs~l~~~~~~----~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~~~~~~l~~~~~~ 89 (643)
|+++||+|||++|..+++. ...++++..+++|+.+.+.|++++|+||+|||+|..+.+...... .....++
T Consensus 2 ~~~ivvalgGnAl~~~~~~~~~~~q~~~v~~~a~~i~~~~~~g~~vvi~hGnGpQVG~i~~~~~~~~~-----~~~~~~p 76 (313)
T PRK12454 2 KKRIVIALGGNALLQPGEKGTAENQMKNVRKTAKQIADLIEEGYEVVITHGNGPQVGNLLLQMDAAKD-----VGIPPFP 76 (313)
T ss_pred CceEEEEeChHHhCCCCCCCcchHHHHHHHHHHHHHHHHHHcCCEEEEEECCChHHHHHHHHHHHhcc-----cCCCCCc
Confidence 4799999999999875542 223589999999999999999999999999999987655322111 0112233
Q ss_pred hhHHHHHHhchHHH--HHHHHHHhccCCCCc------ceeEecccc--cCc-----------------------------
Q 006484 90 LDGKACAAVGQSSL--MALYDTLFSQLDVTS------SQLLVTDSD--FRD----------------------------- 130 (643)
Q Consensus 90 l~~~~~~a~G~~~~--~~~~~~~l~~~g~~~------~~~~~t~~~--~~~----------------------------- 130 (643)
|......+.|..+. ...+.+.|...|+.. .|+.+...| |.+
T Consensus 77 ld~~~a~sqG~igy~l~~al~~~l~~~g~~~~v~t~~tq~~Vd~~Dpaf~~PtKpiG~~y~~~~a~~~~~~~g~~~~~d~ 156 (313)
T PRK12454 77 LDVAGAMTQGWIGYMIQQALRNELAKRGIEKQVATIVTQVIVDKNDPAFQNPTKPVGPFYDEEEAKKLAKEKGWIVKEDA 156 (313)
T ss_pred cchhhhhhhHHHHHHHHHHHHHHHHhcCCCCceEEEEEEEEECCCCccccCCCCCcCCCcCHHHHHHHHHHcCCEEEEcC
Confidence 33334444454442 245667777777542 122222211 111
Q ss_pred -chhhc----------hHHHHHHHHHhCCCeeEecCCCceeccCCCCCCCCce-----eecchhHHHHHHhhcCCCEEEE
Q 006484 131 -EDFRK----------QLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI-----FWDNDSLAGLLALELKADLLVL 194 (643)
Q Consensus 131 -~~~~~----------~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~~~~~-----~~~~D~~A~~lA~~L~Ad~li~ 194 (643)
+++++ ++.+.|+.||++|.|||++|+-++.... ..+.. ++|+|.+|+.+|.+|+||+|+|
T Consensus 157 g~g~RrvV~SP~P~~ive~~aI~~LLe~G~IvI~~GgGGiPV~~----~~g~~~gveaViD~D~aAa~LA~~L~AD~LIi 232 (313)
T PRK12454 157 GRGWRRVVPSPDPLGIVEIEVIKALVENGFIVIASGGGGIPVIE----EDGELKGVEAVIDKDLASELLAEELNADIFII 232 (313)
T ss_pred CCceEEEeCCCCCccccCHHHHHHHHHCCCEEEEeCCCccceEc----CCCcEEeeeeecCccHHHHHHHHHcCCCEEEE
Confidence 11111 3478999999999999999844333211 12211 3789999999999999999999
Q ss_pred eccCCccccCCCCCCCccceeeeecccchhHHhcCCCCCccCCCchHHHHHHHHHHHcCC-cEEEEeCCCcchHHHHHcC
Q 006484 195 LSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGI-PVVITSGFAMDSIIKVLEG 273 (643)
Q Consensus 195 lTdVdGVy~~~P~~p~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gv-~v~I~~g~~~~~l~~~~~g 273 (643)
+|||||||++ +++|++++|++|+.+|+.+++..+ .+.+|||.||+++|..+++.|. +++|++ ++.+.+++.|
T Consensus 233 LTdVdGVy~~-~~~p~~~~i~~It~~e~~~~i~~g---~~~~GgM~pKv~AA~~~v~~gg~~a~I~~---~~~i~~aL~G 305 (313)
T PRK12454 233 LTDVEKVYLN-YGKPDQKPLDKVTVEEAKKYYEEG---HFKAGSMGPKILAAIRFVENGGKRAIIAS---LEKAVEALEG 305 (313)
T ss_pred EeCCceeeCC-CCCCCCeEccccCHHHHHHHHhcC---CcCCCChHHHHHHHHHHHHcCCCeEEECc---hHHHHHHHCC
Confidence 9999999987 447899999999999998877643 4779999999999999998875 599986 6788888888
Q ss_pred CceeeEEe
Q 006484 274 KRVGTLFH 281 (643)
Q Consensus 274 ~~~GT~i~ 281 (643)
+ .||.|.
T Consensus 306 ~-~GT~I~ 312 (313)
T PRK12454 306 K-TGTRII 312 (313)
T ss_pred C-CCeEeC
Confidence 7 799885
No 156
>cd04250 AAK_NAGK-C AAK_NAGK-C: N-Acetyl-L-glutamate kinase - cyclic (NAGK-C) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of arginine biosynthesis found in some bacteria and photosynthetic organisms using the non-acetylated, cyclic route of ornithine biosynthesis. In this pathway, glutamate is first N-acetylated and then phosphorylated by NAGK to give phosphoryl NAG, which is converted to NAG-ornithine. There are two variants of this pathway. In one, typified by the pathway in Thermotoga maritima and Pseudomonas aeruginosa, the acetyl group is recycled by reversible transacetylation from acetylornithine to glutamate. The phosphorylation of NAG by NAGK is feedback inhibited by arginine. In photosynthetic organisms, NAGK is the target of the nitrogen-signaling protein PII. Hexameric formation of NAGK domains appears to be essential to both arginine inhibition and NAGK-PII complex formation. NAGK-C are members of the Amino A
Probab=99.97 E-value=1.2e-30 Score=267.97 Aligned_cols=241 Identities=21% Similarity=0.309 Sum_probs=176.8
Q ss_pred cceEEEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcCCCccc-ccCcc---cc
Q 006484 14 VKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLAD-LQKPQ---NE 89 (643)
Q Consensus 14 ~~~iVIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~~~~~~-l~~~~---~~ 89 (643)
++++||||||+++++++ .+..++++|+.++..|.++|||||||+++.+.+.. .+..+++.+ +..++ ++
T Consensus 14 ~~~~ViKlGGs~i~~~~------~~~~~~~~i~~l~~~g~~~ViVhG~g~~~~~~l~~--~g~~~~~~~g~r~t~~~~~~ 85 (279)
T cd04250 14 GKTVVIKYGGNAMKDEE------LKESFARDIVLLKYVGINPVVVHGGGPEINEMLKK--LGIESEFVNGLRVTDEETME 85 (279)
T ss_pred CCEEEEEEChHHhcCcc------HHHHHHHHHHHHHHCCCCEEEEcCCcHHHHHHHHH--CCCCCEeECCeecCCHHHHH
Confidence 47999999999998764 35789999999999999999999999987765533 233322221 22222 12
Q ss_pred hhHHHHHHhchHHHHHHHHHHhccCCCCcceeE------ecccc-----------cCcchh-hchHHHHHHHHHhCCCee
Q 006484 90 LDGKACAAVGQSSLMALYDTLFSQLDVTSSQLL------VTDSD-----------FRDEDF-RKQLYDTVQSLLDLRVIP 151 (643)
Q Consensus 90 l~~~~~~a~G~~~~~~~~~~~l~~~g~~~~~~~------~t~~~-----------~~~~~~-~~~~~~~i~~ll~~g~iP 151 (643)
+..++ ..|+... .+...|.+.|+++..+. ++... +...+. ...+.+.|+.+++.|.||
T Consensus 86 ~~~~~--~~g~ln~--~l~~~L~~~Gv~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~i~~~~i~~ll~~g~IP 161 (279)
T cd04250 86 IVEMV--LVGKVNK--EIVSLINRAGGKAVGLSGKDGNLIKAKKKDATVIEEIIDLGFVGEVTEVNPELLETLLEAGYIP 161 (279)
T ss_pred HHHHH--HcCchHH--HHHHHHHHcCCCcceeecCCCCEEEEEECcccccCCCcccCcccceEEEcHHHHHHHHHCCCeE
Confidence 11111 1154332 34677877777654432 22111 111122 224579999999999999
Q ss_pred EecCCCceeccCCCCCCCCcee-ecchhHHHHHHhhcCCCEEEEeccCCccccCCCCCCCccceeeeecccchhHHhcCC
Q 006484 152 IFNENDAVSTRKAPYEDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGD 230 (643)
Q Consensus 152 Vv~g~d~v~~~~~~~~~~~~~~-~~~D~~A~~lA~~L~Ad~li~lTdVdGVy~~~P~~p~a~~i~~i~~~e~~~~~~~g~ 230 (643)
|+++ +. .+..+..+ +|+|.+|+.+|.+|+|++|+|+|||||||++|| +| +++|++|+++|+.+++..
T Consensus 162 Vi~~---~~-----~~~~g~~~~~~~D~~A~~lA~~l~A~~li~ltdv~Gv~~~~p-~~-~~~i~~i~~~e~~~l~~~-- 229 (279)
T cd04250 162 VIAP---VG-----VGEDGETYNINADTAAGAIAAALKAEKLILLTDVAGVLDDPN-DP-GSLISEISLKEAEELIAD-- 229 (279)
T ss_pred EEcC---Cc-----cCCCCcEEEeCHHHHHHHHHHHhCCCEEEEEECCcccccCCC-CC-ccccccCCHHHHHHHHHc--
Confidence 9975 11 11234445 899999999999999999999999999999988 34 689999999998876653
Q ss_pred CCCccCCCchHHHHHHHHHHHcCCc-EEEEeCCCcchH-HHHHcCCceeeEE
Q 006484 231 KSRVGRGGMTAKVNAAYCAACAGIP-VVITSGFAMDSI-IKVLEGKRVGTLF 280 (643)
Q Consensus 231 ~~~~~~ggM~~Kl~aa~~a~~~gv~-v~I~~g~~~~~l-~~~~~g~~~GT~i 280 (643)
.+++|||.+|+++|..++++|++ |+|+||+.|+.+ .++++++..||++
T Consensus 230 --~~~tGgm~~Kl~~a~~a~~~g~~~v~I~~g~~~~~ll~~~~~~~~~GT~i 279 (279)
T cd04250 230 --GIISGGMIPKVEACIEALEGGVKAAHIIDGRVPHSLLLEIFTDEGIGTMI 279 (279)
T ss_pred --CCCCCchHHHHHHHHHHHHhCCCEEEEeCCCCCchHHHHHhcCCCCccCC
Confidence 37899999999999999999997 999999999975 8889988889974
No 157
>cd07080 ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC. Acyl-CoA reductase, LuxC, (EC=1.2.1.50) is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase. The fatty acid reductase, a luminescence-specific, multienzyme complex (LuxCDE), reduces myristic acid to generate the long chain fatty aldehyde required for the luciferase-catalyzed reaction resulting in the emission of blue-green light. Mutational studies of conserved cysteines of LuxC revealed that the cysteine which aligns with the catalytic cysteine conserved throughout the ALDH superfamily is the LuxC acylation site. This CD is composed of mainly bacterial sequences but also includes a few archaeal sequences similar to the Methanospirillum hungateiacyl acyl-CoA reductase RfbN.
Probab=99.97 E-value=3.8e-30 Score=278.92 Aligned_cols=313 Identities=14% Similarity=0.099 Sum_probs=228.7
Q ss_pred hHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHH---HHHHHHHHhchhhHHHHHhhcChhHHHHHH
Q 006484 292 GAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENE---ADVAAAQEAGYAKSLVSRLALKPGKISSLA 368 (643)
Q Consensus 292 ~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i~~~~~---~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~ 368 (643)
-+++.++..+++++.|..-+...|...++++...+..+.+.+.+++. .++. ...+...+
T Consensus 25 ~~~~iv~~l~~~~~~~~~~~~~~r~~~l~~l~~~~~~~~~~~~~a~~~l~~~~~------------------r~~l~~~l 86 (422)
T cd07080 25 PVEEIVDFLDRAGKRLLDPDYPLRQQAERLLPTVTGYSEEMLREGLKRLMALFR------------------RENLERIL 86 (422)
T ss_pred CHHHHHHHHHHHHHHhcCCCchHHHHHHHhhhhccCCCHHHHHHHHHHHHHHcC------------------HHHHHHHH
Confidence 46778888889999999999999999999999999888877766522 2211 11122111
Q ss_pred HHHHHHhcccccccccccccccCCCeeEEEEeeeeeeEEEEcCCC-chhHHHHHHHHHHhCCEEEEeCCcchHHHHHHHH
Q 006484 369 KSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESR-PDALVQIASLAIRSGNGLLLKGGKEAMRSNAILH 447 (643)
Q Consensus 369 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~~-P~~~~~~~~~AlaaGN~vi~Kps~~tp~t~~~~~ 447 (643)
.. .+. ..+ .+..|. +.+...++.++|+|||++|+||| |.+.++++++||++||++|+|||+.+|.++.++.
T Consensus 87 ~~--el~-~~~----~Ld~w~-~~~~~~~~~~~P~Gvv~~I~p~N~P~l~~~s~~~aLlaGN~~ilKpS~~~p~~~~~l~ 158 (422)
T cd07080 87 ER--ELG-SPG----ILDEWV-PPGRGGYIRAQPRGLVVHIIAGNVPLLPVWSIVRGLLVKNVNLLKMSSSDPLTATALL 158 (422)
T ss_pred HH--hcC-Ccc----cccCCc-cCCCCCeeEEcCCceEEEEccCCccccHHHHHHHHHHhcCceEEECCCccchHHHHHH
Confidence 11 111 000 111111 11234467899999999999985 8888899999999999999999999999999999
Q ss_pred HHHHHhcccccCc----CceEeec--C-cchHhHhhhCCCCccEEEeecCHHHHHHHHHhcC-CCEEEecCcc-ceEEEc
Q 006484 448 KVITSAIPDTVGE----KLIGLVT--S-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK-IPVLGHADGI-CHVYVD 518 (643)
Q Consensus 448 ~l~~~a~~~alP~----g~v~~v~--~-~~~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a~-~p~~lelGG~-~p~iV~ 518 (643)
+++.+ ++|+ +.++++. | +++.++.|..++ |+|+||||+++|+.|++.+. .+.++|+||| +++|++
T Consensus 159 ~~l~~----~~p~~~~~~~~~vv~~~g~~~~~~~~l~~~~--D~i~~~Gs~~~~~~i~~~a~~~~~~Le~Ggk~s~~vi~ 232 (422)
T cd07080 159 RSLAD----VDPNHPLTDSISVVYWPGGDAELEERILASA--DAVVAWGGEEAVKAIRSLLPPGCRLIDFGPKYSFAVID 232 (422)
T ss_pred HHHHh----cCCCCcccceEEEEEecCCchHHHHHHHHhC--CEEEEeCCHHHHHHHHHhCCCCCeeeecCCceeEEEec
Confidence 99986 4787 8899984 4 344666666665 99999999999999998774 5678999999 556666
Q ss_pred CCC----CHHHHHHHHHhhcCCCCC-ccccceeEEEcCcc---CCchhHHHHHHHHHHcCCEEecCc-cc----------
Q 006484 519 KSA----NLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDL---ACNGALNELVVELQHEGVGLFGGP-RA---------- 579 (643)
Q Consensus 519 ~dA----dl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i---~~~~f~~~l~~~~~~~~~~~~g~~-~~---------- 579 (643)
++| |++++++.+++++|.|+| .|+|++++|||+++ + ++|.++|.++++++....-... ..
T Consensus 233 ~~a~~~~dl~~aa~~~a~~~~~~~gQ~C~sp~~v~V~~~~~~~~-~~f~~~l~~~l~~~~~~~p~~~~~~~~~~~~~~~r 311 (422)
T cd07080 233 REALESEKLAEVADALAEDICRYDQQACSSPQVVFVEKDDDEEL-REFAEALAAALERLPRRYPALSLSAAESAKIARAR 311 (422)
T ss_pred HHhhccccHHHHHHHHHHHHHHHhhhhccCCeEEEEECCCCchH-HHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHH
Confidence 668 999999999999999988 99999999999999 9 7999999999887632111110 00
Q ss_pred --------ccc-c-c----C--C-CCccccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEecCHHHHHHHHHhc
Q 006484 580 --------SKL-L-Q----I--P-ETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQV 641 (643)
Q Consensus 580 --------~~~-~-p----v--~-~~~~~~eE~FgPvl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~~~~~~~~l 641 (643)
... . . | . .... ..-.++=.+.|.++++++|++..+|. |=-|.++|..+.+. .++++++
T Consensus 312 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~r~v~v~~v~~l~~~l~~~~~--~lQTvg~~~~~~~~-~~~~~~l 386 (422)
T cd07080 312 LEAEFYELKGGVSRDLGWTVIISDEIGL-EASPLNRTVNVKPVASLDDVLRPVTP--YLQTVGLAPSPAEL-AELADAL 386 (422)
T ss_pred HHHHHHHHhcCCCCCCCeEEEEeCCCCc-cCCCCcCEEEEEEcchHHHHHHhhhh--hcceeEeecChhhH-HHHHHHH
Confidence 000 0 0 1 1 1111 11233446788899999999999985 77799999888776 5666554
No 158
>cd02115 AAK Amino Acid Kinases (AAK) superfamily, catalytic domain; present in such enzymes like N-acetylglutamate kinase (NAGK), carbamate kinase (CK), aspartokinase (AK), glutamate-5-kinase (G5K) and UMP kinase (UMPK). The AAK superfamily includes kinases that phosphorylate a variety of amino acid substrates. These kinases catalyze the formation of phosphoric anhydrides, generally with a carboxylate, and use ATP as the source of the phosphoryl group; are involved in amino acid biosynthesis. Some of these kinases control the process via allosteric feed-back inhibition.
Probab=99.97 E-value=8.9e-31 Score=265.61 Aligned_cols=240 Identities=28% Similarity=0.331 Sum_probs=183.3
Q ss_pred EEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcCCCcc-cccCcccchhHHHHH
Q 006484 18 VVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLA-DLQKPQNELDGKACA 96 (643)
Q Consensus 18 VIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~~~~~-~l~~~~~~l~~~~~~ 96 (643)
||||||++++++ +.+++++++|+.+++.|+++|||||||+++++.+.... ...++. ....+ ......+.
T Consensus 1 ViKiGGs~l~~~------~~~~~~~~~i~~l~~~~~~~viV~ggg~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~~~ 70 (248)
T cd02115 1 VIKFGGSSVSSE------ERLRNLARILVKLASEGGRVVVVHGAGPQITDELLAHG--ELLGYARGLRIT--DRETDALA 70 (248)
T ss_pred CEeeCccccCCH------HHHHHHHHHHHHHHhcCCCEEEEECCCCCcCHHHHHHH--HhhhhhhccCCC--HHHHHHHH
Confidence 799999999874 35889999999999889999999999999888665432 111111 11111 11224566
Q ss_pred HhchHHHHHHHHHHhccCCCCcceeEec-----ccccCcchh-hchHHHHHHHHHhCCCeeEecCCCceeccCCCCCCCC
Q 006484 97 AVGQSSLMALYDTLFSQLDVTSSQLLVT-----DSDFRDEDF-RKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSS 170 (643)
Q Consensus 97 a~G~~~~~~~~~~~l~~~g~~~~~~~~t-----~~~~~~~~~-~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~~~ 170 (643)
+.|+..+..++...|.+.|+++.++... ++++...+. .....+.|+.++++|.|||++|+...... ...+
T Consensus 71 ~~~~~~~~~~~~~~l~~~gi~a~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~l~~~~ipVv~g~~~~~~~----~~~~ 146 (248)
T cd02115 71 AMGEGMSNLLIAAALEQHGIKAVPLDLTQAGFASPNQGHVGKITKVSTDRLKSLLENGILPILSGFGGTDEK----ETGT 146 (248)
T ss_pred HHHHHHHHHHHHHHHHhCCCCeEEEchHHcCeEeCCCCCcccceeeCHHHHHHHHhCCcEEEecCeEeccCC----ceee
Confidence 7777777778889999999887665322 222222222 22457889999999999999985443210 0011
Q ss_pred ceeecchhHHHHHHhhcCCCEEEEeccCCccccCCCC-CCCccceeeeecccchhHHhcCCCCCccCCCchHHHHHHHHH
Q 006484 171 GIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCA 249 (643)
Q Consensus 171 ~~~~~~D~~A~~lA~~L~Ad~li~lTdVdGVy~~~P~-~p~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a 249 (643)
...+++|++|+.+|.+|+|++|+|+|||||||++||+ +|++++|++|+++|+.++.. .|+|..|++++..+
T Consensus 147 ~~~~~sD~~A~~lA~~l~A~~li~~tdV~Gv~~~dP~~~~~a~~i~~i~~~e~~~l~~--------~g~~~~k~~a~~~~ 218 (248)
T cd02115 147 LGRGGSDSTAALLAAALKADRLVILTDVDGVYTADPRKVPDAKLLSELTYEEAAELAY--------AGAMVLKPKAADPA 218 (248)
T ss_pred ecCCCHHHHHHHHHHHcCCCEEEEEecCCeeecCCCCcCCcCeECCcCCHHHHHHHHH--------cCCCccCHHHHHHH
Confidence 1239999999999999999999999999999999995 89999999999998887553 46799999999999
Q ss_pred HHcCCcEEEEeCCCcchHHHHHcCCceeeEE
Q 006484 250 ACAGIPVVITSGFAMDSIIKVLEGKRVGTLF 280 (643)
Q Consensus 250 ~~~gv~v~I~~g~~~~~l~~~~~g~~~GT~i 280 (643)
.++|++++|+|+..++.+ ++++++..||+|
T Consensus 219 ~~~~~~v~I~~~~~~~~l-~~~~~~~~GT~I 248 (248)
T cd02115 219 ARAGIPVRIANTENPGAL-ALFTPDGGGTLI 248 (248)
T ss_pred HHcCCcEEEEeCCCcccc-cccCCCCCCCCC
Confidence 999999999999999999 989888889964
No 159
>PRK05279 N-acetylglutamate synthase; Validated
Probab=99.97 E-value=5e-30 Score=280.61 Aligned_cols=244 Identities=17% Similarity=0.244 Sum_probs=177.2
Q ss_pred cceEEEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcCCCccc-ccCcccchhH
Q 006484 14 VKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLAD-LQKPQNELDG 92 (643)
Q Consensus 14 ~~~iVIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~~~~~~-l~~~~~~l~~ 92 (643)
++++|||+||+++.+++ ++.++++|+.|++.|+++||||||||++++.+.+ .++++.|.+ ++.+..+...
T Consensus 25 ~~~~VIk~GG~~l~~~~-------~~~~~~~i~~l~~~g~~~VlVHGgg~~i~~~~~~--~g~~~~~~~G~RvT~~~~l~ 95 (441)
T PRK05279 25 GKTFVIMLGGEAIAHGN-------FSNIVHDIALLHSLGIRLVLVHGARPQIEEQLAA--RGIEPRYHKGLRVTDAAALE 95 (441)
T ss_pred CCEEEEEECchhccChh-------HHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHH--cCCCceecCCcccCCHHHHH
Confidence 57999999999998754 6799999999999999999999999999997643 455555543 4444332211
Q ss_pred HHHHHhchHHHHHHHHHHhccCCCCcce-----eEeccc--------------ccCcchhh-chHHHHHHHHHhCCCeeE
Q 006484 93 KACAAVGQSSLMALYDTLFSQLDVTSSQ-----LLVTDS--------------DFRDEDFR-KQLYDTVQSLLDLRVIPI 152 (643)
Q Consensus 93 ~~~~a~G~~~~~~~~~~~l~~~g~~~~~-----~~~t~~--------------~~~~~~~~-~~~~~~i~~ll~~g~iPV 152 (643)
-+..+.|+.... +...|.+ |+++.. +...++ ++...|.+ ..+.+.|+.++++|+|||
T Consensus 96 ~~~~~~g~v~~~--l~~~l~~-g~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~v~~v~~~~i~~ll~~g~ipV 172 (441)
T PRK05279 96 CVKQAAGELRLD--IEARLSM-GLPNTPMAGAHIRVVSGNFVTARPLGVDDGVDYQHTGEVRRIDAEAIRRQLDSGAIVL 172 (441)
T ss_pred HHHHHHHHHHHH--HHHHHhc-cCCCCcccCCcceEeeccEEEEEECCCCCCccccceeeEEEEeHHHHHHHHHCCCeEE
Confidence 122223443322 2344432 433211 211111 22222222 246899999999999999
Q ss_pred ecCCCceeccCCCCCCCCcee-ecchhHHHHHHhhcCCCEEEEeccCCccccCCCCCCCccceeeeecccchhHHhcCCC
Q 006484 153 FNENDAVSTRKAPYEDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDK 231 (643)
Q Consensus 153 v~g~d~v~~~~~~~~~~~~~~-~~~D~~A~~lA~~L~Ad~li~lTdVdGVy~~~P~~p~a~~i~~i~~~e~~~~~~~g~~ 231 (643)
+. ++ +++..|..+ +|+|.+|+.||.+|+|++|+|+|||||||++ ++++|++|+.+++.+++..- .
T Consensus 173 ~~------~i--~~~~~g~~~ni~~D~~a~~lA~~l~a~~lv~ltdv~GV~~~-----~~~~i~~i~~~~~~~~~~~~-~ 238 (441)
T PRK05279 173 LS------PL--GYSPTGESFNLTMEEVATQVAIALKADKLIFFTESQGVLDE-----DGELIRELSPNEAQALLEAL-E 238 (441)
T ss_pred EC------Cc--eECCCCCEEEECHHHHHHHHHHHcCCCEEEEEECCCCccCC-----CCchhhhCCHHHHHHHHhhh-h
Confidence 95 32 222244555 9999999999999999999999999999964 37899999999988776511 0
Q ss_pred CCccCCCchHHHHHHHHHHHcCCc-EEEEeCCCcchH-HHHHcCCceeeEEecC
Q 006484 232 SRVGRGGMTAKVNAAYCAACAGIP-VVITSGFAMDSI-IKVLEGKRVGTLFHRD 283 (643)
Q Consensus 232 ~~~~~ggM~~Kl~aa~~a~~~gv~-v~I~~g~~~~~l-~~~~~g~~~GT~i~~~ 283 (643)
+.+++|||.||+++|..++++|++ |||++|+.|+.| .++++.+..||.+..+
T Consensus 239 ~~~~~ggM~~Kv~~a~~~~~~gv~~v~i~~~~~~~~l~~~l~~~~g~GT~i~~~ 292 (441)
T PRK05279 239 DGDYNSGTARFLRAAVKACRGGVRRSHLISYAEDGALLQELFTRDGIGTMIVME 292 (441)
T ss_pred cCCCCccHHHHHHHHHHHHHcCCCEEEEecCCCCcHHHHHHhcCCCCceEEecC
Confidence 236799999999999999999996 999999999998 6677777799999886
No 160
>cd04235 AAK_CK AAK_CK: Carbamate kinase (CK) catalyzes both the ATP-phosphorylation of carbamate and carbamoyl phosphate (CP) utilization with the production of ATP from ADP and CP. Both CK (this CD) and nonhomologous CP synthetase synthesize carbamoyl phosphate, an essential precursor of arginine and pyrimidine bases, in the presence of ATP, bicarbonate, and ammonia. CK is a homodimer of 33 kDa subunits and is a member of the Amino Acid Kinase Superfamily (AAK).
Probab=99.97 E-value=1.8e-29 Score=256.95 Aligned_cols=252 Identities=25% Similarity=0.341 Sum_probs=177.0
Q ss_pred eEEEEeCCcccccCCC----ccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcCCCcccccCcccchh
Q 006484 16 RLVVKVGTAVVTRSDG----RLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELD 91 (643)
Q Consensus 16 ~iVIKlGGs~l~~~~~----~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~~~~~~l~~~~~~l~ 91 (643)
++||||||++|..+++ ..+.++++..+++|+.+.+.|++++||||||||+|..+.+...... . ...++|.
T Consensus 1 rivialgGnal~~~~~~~~~~~q~~~~~~~a~~i~~l~~~g~~vvi~hGnGPqvG~i~~~~~~~~~----~--~~~~pld 74 (308)
T cd04235 1 RIVVALGGNALLRRGEPGTAEEQRENVKIAAKALADLIKNGHEVVITHGNGPQVGNLLLQNEAAAE----K--VPAYPLD 74 (308)
T ss_pred CEEEEecHHHhCCCCCCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHHhccc----c--CCCCCcc
Confidence 5899999999987553 4678899999999999999999999999999999987755322111 0 1111222
Q ss_pred HHHHHHhchHHH--HHHHHHHhccCCCCcc------eeEecccc--c----------Cc--------------------c
Q 006484 92 GKACAAVGQSSL--MALYDTLFSQLDVTSS------QLLVTDSD--F----------RD--------------------E 131 (643)
Q Consensus 92 ~~~~~a~G~~~~--~~~~~~~l~~~g~~~~------~~~~t~~~--~----------~~--------------------~ 131 (643)
.....+.|..+. ...+.+.|...|+... |..+..+| | .+ +
T Consensus 75 ~~~a~~~G~ig~~~~~al~~~l~~~~~~~~v~t~~t~~~V~~~dpaf~~ptKpiG~~y~~~~a~~~~~~~g~~~~~d~~~ 154 (308)
T cd04235 75 VCGAMSQGMIGYMLQQALDNELPKRGIDKPVVTLVTQVVVDANDPAFKNPTKPIGPFYSEEEAEELAAEKGWTFKEDAGR 154 (308)
T ss_pred hhcchhhHHHHHHHHHHHHHHHHHcCCCCceEEEEeEEEEcCCCccccCCCCCcCCCcCHHHHHHHHHHcCCEEEEeCCC
Confidence 222333343332 2355677777665421 22222111 1 11 1
Q ss_pred hhhc----------hHHHHHHHHHhCCCeeEecCCCceeccCCCCCCCCc-eeecchhHHHHHHhhcCCCEEEEeccCCc
Q 006484 132 DFRK----------QLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSG-IFWDNDSLAGLLALELKADLLVLLSDVEG 200 (643)
Q Consensus 132 ~~~~----------~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~~~~-~~~~~D~~A~~lA~~L~Ad~li~lTdVdG 200 (643)
++++ .+.+.|+.||++|+|||++|+-++....-.+.-.+. .++|+|++|+.+|.+|+||+|+|+|||||
T Consensus 155 g~rrvV~SP~P~~iv~~~~I~~Ll~~g~IpI~~GggGiPv~~~~~~~~gveaVid~D~~AallA~~l~Ad~LiilTdVdG 234 (308)
T cd04235 155 GYRRVVPSPKPKDIVEIEAIKTLVDNGVIVIAAGGGGIPVVREGGGLKGVEAVIDKDLASALLAEEINADLLVILTDVDN 234 (308)
T ss_pred CceeeeCCCCCccccCHHHHHHHHHCCCEEEEECCCccCEEEcCCceeeeeeccCccHHHHHHHHHcCCCEEEEEecCCe
Confidence 1221 346889999999999999984333221000000111 14899999999999999999999999999
Q ss_pred cccCCCCCCCccceeeeecccchhHHhcCCCCCccCCCchHHHHHHHHHHHcC-CcEEEEeCCCcchHHHHHcCCceeeE
Q 006484 201 LYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAG-IPVVITSGFAMDSIIKVLEGKRVGTL 279 (643)
Q Consensus 201 Vy~~~P~~p~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~g-v~v~I~~g~~~~~l~~~~~g~~~GT~ 279 (643)
||++++ +|++++|++|+++|+.+++..+ .+++|||.||+++|..+++.| .+++|++ ++.+.+++.|+ .||.
T Consensus 235 Vy~~~~-~pda~~i~~Is~~e~~~l~~~g---~~~tGGM~pKv~aA~~~a~~gg~~v~I~~---~~~i~~aL~G~-~GT~ 306 (308)
T cd04235 235 VYINFG-KPNQKALEQVTVEELEKYIEEG---QFAPGSMGPKVEAAIRFVESGGKKAIITS---LENAEAALEGK-AGTV 306 (308)
T ss_pred EECCCC-CCCCeEcCCcCHHHHHHHHhcC---ccccCCcHHHHHHHHHHHHhCCCeEEECC---HHHHHHHHCCC-CCeE
Confidence 999754 7899999999999988876543 578999999999999988875 5599977 67888888887 6998
Q ss_pred Ee
Q 006484 280 FH 281 (643)
Q Consensus 280 i~ 281 (643)
|.
T Consensus 307 I~ 308 (308)
T cd04235 307 IV 308 (308)
T ss_pred EC
Confidence 73
No 161
>TIGR01890 N-Ac-Glu-synth amino-acid N-acetyltransferase. This model represents a clade of amino-acid N-acetyltransferases acting mainly on glutamate in the first step of the "acetylated" ornithine biosynthesis pathway. For this reason it is also called N-acetylglutamate synthase. The enzyme may also act on aspartate.
Probab=99.97 E-value=4.1e-29 Score=272.08 Aligned_cols=240 Identities=19% Similarity=0.219 Sum_probs=176.1
Q ss_pred ccceEEEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcCCCccc-ccCcc---c
Q 006484 13 DVKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLAD-LQKPQ---N 88 (643)
Q Consensus 13 ~~~~iVIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~~~~~~-l~~~~---~ 88 (643)
+++++|||+||+++++++ +..++++|+.|+..|.++|||||||+++++.+.. .++++.|.+ ++.+. +
T Consensus 16 ~~~~~ViK~GG~~~~~~~-------~~~~~~~i~~l~~~g~~~vlVHGgg~~i~~~~~~--~g~~~~~~~G~RvT~~~~l 86 (429)
T TIGR01890 16 RGKTFVVGLGGELVEGGN-------LGNIVADIALLHSLGVRLVLVHGARPQIERILAA--RGRTPHYHRGLRVTDEASL 86 (429)
T ss_pred CCCEEEEEEChhhccCcc-------HHHHHHHHHHHHHCCCcEEEEcCCCHHHHHHHHH--cCCCceeeCCcccCCHHHH
Confidence 468999999999998754 5789999999999999999999999999997643 456656554 44433 3
Q ss_pred chhHHHHHHhchHHHH--HHHHHHhccCCCC-----cc--eeEecc-------cccCcchh-hchHHHHHHHHHhCCCee
Q 006484 89 ELDGKACAAVGQSSLM--ALYDTLFSQLDVT-----SS--QLLVTD-------SDFRDEDF-RKQLYDTVQSLLDLRVIP 151 (643)
Q Consensus 89 ~l~~~~~~a~G~~~~~--~~~~~~l~~~g~~-----~~--~~~~t~-------~~~~~~~~-~~~~~~~i~~ll~~g~iP 151 (643)
++.. ...|+.... ..+.......++. .. .++... .|+...|. ..++.+.|+.+|++|+||
T Consensus 87 ~~~~---~~~g~vn~~l~~~l~~~~~~~~~~~~~l~~~dg~~~~a~~~~~~~~~~~g~~G~v~~v~~~~l~~ll~~g~ip 163 (429)
T TIGR01890 87 EQAQ---QAAGTLRLAIEARLSMSLSNTPMAGSRLPVVSGNFVTARPIGVIEGVDYEHTGVIRKIDTEGIRRQLDAGSIV 163 (429)
T ss_pred HHHH---HHhChHHHHHHHHHHhcCCcccccccCceEccceEEEEEECCCCcCccccccceEEEEcHHHHHHHHHCCCeE
Confidence 3332 225554421 2222222222211 11 111100 12222222 225789999999999999
Q ss_pred EecCCCceeccCCCCCCCCcee-ecchhHHHHHHhhcCCCEEEEeccCCccccCCCCCCCccceeeeecccchhHHhcCC
Q 006484 152 IFNENDAVSTRKAPYEDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGD 230 (643)
Q Consensus 152 Vv~g~d~v~~~~~~~~~~~~~~-~~~D~~A~~lA~~L~Ad~li~lTdVdGVy~~~P~~p~a~~i~~i~~~e~~~~~~~g~ 230 (643)
|+. |++ +++++..+ +|+|.+|+.+|.+|+|++|+|+|||+|||+++ +++|++|+.+|+++++..
T Consensus 164 vi~------pi~--~~~~g~~~nvnaD~~A~~lA~al~a~kli~ltdv~Gv~~~~-----g~~i~~i~~~~~~~l~~~-- 228 (429)
T TIGR01890 164 LLS------PLG--HSPTGETFNLDMEDVATSVAISLKADKLIYFTLSPGISDPD-----GTLAAELSPQEVESLAER-- 228 (429)
T ss_pred EEC------Ccc--cCCCCCEEEeCHHHHHHHHHHHcCCCEEEEEeCCCcccCCC-----CCCcccCCHHHHHHHHHh--
Confidence 995 533 33456666 99999999999999999999999999999752 689999999988877753
Q ss_pred CCCccCCC-chHHHHHHHHHHHcCCc-EEEEeCCCcchH-HHHHcCCceeeEEecC
Q 006484 231 KSRVGRGG-MTAKVNAAYCAACAGIP-VVITSGFAMDSI-IKVLEGKRVGTLFHRD 283 (643)
Q Consensus 231 ~~~~~~gg-M~~Kl~aa~~a~~~gv~-v~I~~g~~~~~l-~~~~~g~~~GT~i~~~ 283 (643)
..|| |.||+++|..+++.|++ |||++|+.|+.| .++++.+..||.+..+
T Consensus 229 ----~~~~~~~~kl~~a~~a~~~gv~~v~i~~g~~~~~l~~el~~~~g~GT~i~~d 280 (429)
T TIGR01890 229 ----LGSETTRRLLSAAVKACRGGVHRSHIVSYAEDGSLLQELFTRDGIGTSISKE 280 (429)
T ss_pred ----ccCCCcHHHHHHHHHHHHcCCCeEEEECCCCCcHHHHHHhcCCCCcceEecc
Confidence 2455 59999999999999987 999999999998 7788888899999876
No 162
>cd04246 AAK_AK-DapG-like AAK_AK-DapG-like: Amino Acid Kinase Superfamily (AAK), AK-DapG-like; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the diaminopimelate-sensitive aspartokinase isoenzyme AKI (DapG), a monofunctional enzymes found in Bacilli (Bacillus subtilis 168), Clostridia, and Actinobacteria bacterial species, as well as, the catalytic AK domain of the lysine-sensitive aspartokinase isoenzyme AKII of Bacillus subtilis 168, the lysine plus threonine-sensitive aspartokinase of Corynebacterium glutamicum, and related isoenzymes. In Bacillus subtilis, the regulation of the diaminopimelate-lysine biosynthetic pathway involves dual control by diaminopimelate and lysine, effected through separate diaminopimelate- and lysine-sensitive aspartokinase isoenzymes. The role of the AKI isoenzyme is most likely to provide a constant level of aspartyl-beta-phosphate for the biosynthesis of diaminopimelate for peptidoglycan synthesis and dipicolinate during sporulati
Probab=99.97 E-value=1.4e-29 Score=254.68 Aligned_cols=221 Identities=19% Similarity=0.257 Sum_probs=168.6
Q ss_pred eEEEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcCCCcccccCcccchhHHHH
Q 006484 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKAC 95 (643)
Q Consensus 16 ~iVIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~ 95 (643)
.+||||||+++.+. +.++.++++|+.+++.|+++|||||||+..+..+++.... ...+.+.+ ..+++
T Consensus 1 ~iViK~GGs~l~~~------~~~~~~~~~i~~l~~~g~~~viV~sg~g~~~~~ll~~~~~-~~~~~~~~------~~~~i 67 (239)
T cd04246 1 IIVQKFGGTSVADI------ERIKRVAERIKKAVKKGYQVVVVVSAMGGTTDELIGLAKE-VSPRPSPR------ELDML 67 (239)
T ss_pred CEEEEECccccCCH------HHHHHHHHHHHHHHHcCCCEEEEECCCCchHHHHHHHHHH-hccCCCHH------HHHHH
Confidence 47999999999864 3589999999999999999999999766566655543322 11111111 13467
Q ss_pred HHhchHHHHHHHHHHhccCCCCccee------EecccccCcchhhchHHHHHHHHHhCCCeeEecCCCceeccCCCCCCC
Q 006484 96 AAVGQSSLMALYDTLFSQLDVTSSQL------LVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDS 169 (643)
Q Consensus 96 ~a~G~~~~~~~~~~~l~~~g~~~~~~------~~t~~~~~~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~~ 169 (643)
.++|+..+..++...|...|+++.++ +++...+.+......+.+.++.++++|+|||++|+-+.. .+
T Consensus 68 ~~~Ge~~~~~~~~~~l~~~g~~a~~l~~~~~~l~~~~~~~~~~~~~~~~~~l~~ll~~g~ipVi~g~~~~~-------~~ 140 (239)
T cd04246 68 LSTGEQISAALLAMALNRLGIKAISLTGWQAGILTDDHHGNARIIDIDPKRILEALEEGDVVVVAGFQGVN-------ED 140 (239)
T ss_pred HHHhHHHHHHHHHHHHHhCCCCeEEeccccCCEEecCCCCceeechhhHHHHHHHHhcCCEEEEcCccccC-------CC
Confidence 88899888778899999999886544 233333332222334578999999999999998731111 12
Q ss_pred Cce----eecchhHHHHHHhhcCCCEEEEeccCCccccCCCC-CCCccceeeeecccchhHHhcCCCCCccCCCchHHHH
Q 006484 170 SGI----FWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVN 244 (643)
Q Consensus 170 ~~~----~~~~D~~A~~lA~~L~Ad~li~lTdVdGVy~~~P~-~p~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~Kl~ 244 (643)
+.. ++|+|++|+.+|.+|+|++|+|+|||||||++||+ +|++++|++|+++|+.++... |.+..|++
T Consensus 141 g~~~~l~~g~~D~~A~~lA~~l~A~~li~~tdV~GVy~~dP~~~~~a~~i~~l~~~e~~~l~~~--------G~~~~~~~ 212 (239)
T cd04246 141 GEITTLGRGGSDTTAVALAAALKADRCEIYTDVDGVYTADPRIVPKARKLDVISYDEMLEMASL--------GAKVLHPR 212 (239)
T ss_pred CCEEecCCCChHHHHHHHHHHcCCCEEEEEECCCCCCCCCCCCCCCCeEcccCCHHHHHHHHhC--------CCcccCHH
Confidence 222 25899999999999999999999999999999996 799999999999999876542 55788999
Q ss_pred HHHHHHHcCCcEEEEeCCCc
Q 006484 245 AAYCAACAGIPVVITSGFAM 264 (643)
Q Consensus 245 aa~~a~~~gv~v~I~~g~~~ 264 (643)
++..+.++|+|++|.|++.|
T Consensus 213 a~~~a~~~gi~i~i~~~~~~ 232 (239)
T cd04246 213 SVELAKKYNVPLRVRSSFSE 232 (239)
T ss_pred HHHHHHHCCCeEEEecCCCC
Confidence 99999999999999999876
No 163
>cd04239 AAK_UMPK-like AAK_UMPK-like: UMP kinase (UMPK)-like, the microbial/chloroplast uridine monophosphate kinase (uridylate kinase) enzyme that catalyzes UMP phosphorylation and plays a key role in pyrimidine nucleotide biosynthesis. Regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway). The UMP kinases of E. coli (Ec) and Pyrococcus furiosus (Pf) are known to function as homohexamers, with GTP and UTP being allosteric effectors. Like other related enzymes (carbamate kinase, aspartokinase, and N-acetylglutamate kinase) the E. coli and most bacterial UMPKs have a conserved, N-terminal, lysine residue proposed to function in the catalysis of the phosphoryl group transfer, whereas most archaeal UMPKs appear to lack this residue and the Pyrococcus furiosus structure has an additional Mg ion bound to the ATP molecule which is proposed to function as the catalysis instead. Als
Probab=99.97 E-value=3.6e-29 Score=249.88 Aligned_cols=228 Identities=19% Similarity=0.253 Sum_probs=170.8
Q ss_pred eEEEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcCCCcccccCcccchhHHHH
Q 006484 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKAC 95 (643)
Q Consensus 16 ~iVIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~ 95 (643)
++|||||||+++++++.++.+.++.++++|+++++.|+++|||||||..+++.... ...... ..++. .+..
T Consensus 1 ~iViKiGGs~l~~~~~~~~~~~i~~~a~~i~~~~~~g~~vvvV~ggG~~a~~~~~~-~~~~~~--~~~~~------~~~~ 71 (229)
T cd04239 1 RIVLKLSGEALAGEGGGIDPEVLKEIAREIKEVVDLGVEVAIVVGGGNIARGYIAA-ARGMPR--ATADY------IGML 71 (229)
T ss_pred CEEEEECcceecCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCChHHhhHHHh-hcCCCh--hhHHH------HHHH
Confidence 58999999999998777888999999999999999999999999987755664321 111110 01111 1122
Q ss_pred HHhchHHHHHHHHHHhccCCCCcceeEecccccCcchhhchHHHHHHHHHhCCCeeEecCCCceeccCCCCCCCCceeec
Q 006484 96 AAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWD 175 (643)
Q Consensus 96 ~a~G~~~~~~~~~~~l~~~g~~~~~~~~t~~~~~~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~~~~~~~~ 175 (643)
...++. .++...|..+|+++.++.. .++...... .+.+.+..++++|.|||++|+. |..+.+
T Consensus 72 ~~~l~~---~l~~~~l~~~Gi~a~~~~~--~~~~~~~~~-~~~~~l~~~l~~g~ipVi~g~~------------g~~~~~ 133 (229)
T cd04239 72 ATVMNA---LALQDALEKLGVKTRVMSA--IPMQGVAEP-YIRRRAIRHLEKGRIVIFGGGT------------GNPGFT 133 (229)
T ss_pred HHHHHH---HHHHHHHHHcCCCEEEeCH--HHHhhhhcc-ccHHHHHHHHhCCCEEEEeCcc------------CCCCCC
Confidence 222332 2445888888988775321 111111011 1356799999999999998722 233478
Q ss_pred chhHHHHHHhhcCCCEEEEeccCCccccCCCC-CCCccceeeeecccchhHHhcCCCCCccCCCchHHHHHHHHHHHcCC
Q 006484 176 NDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGI 254 (643)
Q Consensus 176 ~D~~A~~lA~~L~Ad~li~lTdVdGVy~~~P~-~p~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gv 254 (643)
+|++|+.+|.+|+||+|+|+|||||||++||+ +|++++|++|+++|+.++.. |..|+.++..+.+.|+
T Consensus 134 sD~~A~~lA~~l~a~~li~~tdVdGvy~~dP~~~~~a~~i~~i~~~e~~~~~~-----------~~~~~~a~~~~~~~~i 202 (229)
T cd04239 134 TDTAAALRAEEIGADVLLKATNVDGVYDADPKKNPDAKKYDRISYDELLKKGL-----------KVMDATALTLCRRNKI 202 (229)
T ss_pred cHHHHHHHHHHcCCCEEEEEECCCcccCCCCCCCCCCeEEeEEcHHHHHHHhc-----------CCccHHHHHHHHHCCC
Confidence 99999999999999999999999999999996 89999999999988775321 4567788888999999
Q ss_pred cEEEEeCCCcchHHHHHcCCceeeEEe
Q 006484 255 PVVITSGFAMDSIIKVLEGKRVGTLFH 281 (643)
Q Consensus 255 ~v~I~~g~~~~~l~~~~~g~~~GT~i~ 281 (643)
+++|+||+.|+.+.+.++|+..||++.
T Consensus 203 ~v~I~~g~~~~~l~~~l~g~~~GT~i~ 229 (229)
T cd04239 203 PIIVFNGLKPGNLLRALKGEHVGTLIE 229 (229)
T ss_pred eEEEECCCChhHHHHHHcCCCCCeEeC
Confidence 999999999999999999888899863
No 164
>PRK00358 pyrH uridylate kinase; Provisional
Probab=99.97 E-value=6.1e-29 Score=248.86 Aligned_cols=229 Identities=20% Similarity=0.277 Sum_probs=166.0
Q ss_pred ceEEEEeCCcccccCCC-ccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcCCCcccccCcccchhHH
Q 006484 15 KRLVVKVGTAVVTRSDG-RLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGK 93 (643)
Q Consensus 15 ~~iVIKlGGs~l~~~~~-~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 93 (643)
+++|||||||+++++.. .++.+.+++++++|+++++.|+++|||||||. +.+.+.....+... ..++. .+
T Consensus 1 ~~iViK~GGs~l~~~~~~~~~~~~i~~~~~~i~~~~~~g~~vvlV~gGG~-~a~~~~~~~~~~~~--~~~~~------~~ 71 (231)
T PRK00358 1 KRVLLKLSGEALAGEKGFGIDPEVLDRIAEEIKEVVELGVEVAIVVGGGN-IFRGYIGAAAGMDR--ATADY------MG 71 (231)
T ss_pred CeEEEEeccceecCCCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEECCCH-HHHHHHHhhcCCCh--hhHHH------HH
Confidence 47999999999986532 46788999999999999999999999999865 44433211011100 00111 11
Q ss_pred HHHHhchHHHHHHHHHHhccCCCCcceeEecccccCcchhhchHHHHHHHHHhCCCeeEecCCCceeccCCCCCCCCcee
Q 006484 94 ACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIF 173 (643)
Q Consensus 94 ~~~a~G~~~~~~~~~~~l~~~g~~~~~~~~t~~~~~~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~~~~~~ 173 (643)
++...++. .++...|...|+++. ++ +...+...+... ..+.+..+|++|.|||++|+ .+..+
T Consensus 72 ~~~~~l~~---~ll~~~l~~~Gi~a~-~~-~~~~~~~~~~~~-~~~~~~~~l~~g~vPVv~g~------------~~~~~ 133 (231)
T PRK00358 72 MLATVMNA---LALQDALERAGVDTR-VQ-SAIPMPQVAEPY-IRRRAIRHLEKGRVVIFAAG------------TGNPF 133 (231)
T ss_pred HHHHHHHH---HHHHHHHHHcCCCeE-Ee-chhhcccccCcc-cHHHHHHHHHCCCEEEEECC------------CCCCC
Confidence 22233332 245688989998765 22 111111111111 13557899999999999651 12235
Q ss_pred ecchhHHHHHHhhcCCCEEEEeccCCccccCCCC-CCCccceeeeecccchhHHhcCCCCCccCCCchHHHHHHHHHHHc
Q 006484 174 WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACA 252 (643)
Q Consensus 174 ~~~D~~A~~lA~~L~Ad~li~lTdVdGVy~~~P~-~p~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~ 252 (643)
.++|++|+.+|.+|+||+|+|+|||||||++||+ +|++++|++|+++|+.+. |....|++++..+.++
T Consensus 134 ~ssD~~A~~lA~~l~A~~li~~tdVdGVy~~dP~~~~~a~~i~~i~~~e~~~~-----------g~~~~d~~a~~~a~~~ 202 (231)
T PRK00358 134 FTTDTAAALRAEEIGADVLLKATNVDGVYDADPKKDPDAKKYDRLTYDEVLEK-----------GLKVMDATAISLARDN 202 (231)
T ss_pred CCchHHHHHHHHHcCCCEEEEeeCcCceEcCCCCCCCCCEEeeEecHHHHHHc-----------CCcchhHHHHHHHHHc
Confidence 7899999999999999999999999999999996 899999999998875432 2233588999999999
Q ss_pred CCcEEEEeCCCcchHHHHHcCCceeeEEe
Q 006484 253 GIPVVITSGFAMDSIIKVLEGKRVGTLFH 281 (643)
Q Consensus 253 gv~v~I~~g~~~~~l~~~~~g~~~GT~i~ 281 (643)
|++++|+||+.|+.|.++++|+..||+|.
T Consensus 203 ~i~v~I~~g~~~~~l~~~l~g~~~GT~i~ 231 (231)
T PRK00358 203 KIPIIVFNMNKPGNLKRVVKGEHIGTLVS 231 (231)
T ss_pred CCcEEEECCCCchHHHHHHCCCCCCEEeC
Confidence 99999999999999999999988899873
No 165
>cd04236 AAK_NAGS-Urea AAK_NAGS-Urea: N-acetylglutamate (NAG) kinase-like domain of the NAG Synthase (NAGS) of the urea cycle found in animals. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate; NAG is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Ureogenic NAGS activity is dependent on the concentration of glutamate (substrate) and arginine (activator). Domain architecture of ureogenic NAGS consists of an N-terminal NAG kinase-like (ArgB) domain (this CD) and a C-terminal DUF619 domain. Members of this CD belong to the protein superfamily, the Amino Acid Kinase Family (AAKF).
Probab=99.97 E-value=1.1e-29 Score=255.31 Aligned_cols=222 Identities=15% Similarity=0.091 Sum_probs=167.9
Q ss_pred cceEEEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcCCCcccccCcccchhHH
Q 006484 14 VKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGK 93 (643)
Q Consensus 14 ~~~iVIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 93 (643)
.+.+|||+||+++.+++ .+++++++|+.|++.|.++||||||||++++.+. ...+.. .++
T Consensus 35 ~~f~VIK~GG~~~~~~~------~~~~l~~dla~L~~lGl~~VlVHGggp~i~~~l~------~~~~~~---~~~----- 94 (271)
T cd04236 35 PAFAVLEVDHSVFRSLE------MVQSLSFGLAFLQRMDMKLLVVMGLSAPDGTNMS------DLELQA---ARS----- 94 (271)
T ss_pred CCEEEEEEChhhhcCch------hHHHHHHHHHHHHHCCCeEEEEeCCChHHhhhhc------CCcchh---eeh-----
Confidence 57899999999997643 4789999999999999999999999999988653 112222 111
Q ss_pred HHHHhchHHHHHHHHHHhccCCCCccee-----Eec-c--cccCcchh-hchHHHHHHHHHhCCCeeEecCCCceeccCC
Q 006484 94 ACAAVGQSSLMALYDTLFSQLDVTSSQL-----LVT-D--SDFRDEDF-RKQLYDTVQSLLDLRVIPIFNENDAVSTRKA 164 (643)
Q Consensus 94 ~~~a~G~~~~~~~~~~~l~~~g~~~~~~-----~~t-~--~~~~~~~~-~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~ 164 (643)
.+..... .+...|+..|+++..+ +++ . .++...|. ..++.+.|+.+|++|+|||+++ .
T Consensus 95 v~~~~n~-----~Lv~~L~~~G~~A~gl~g~~~~i~a~~~~d~g~vG~V~~Vd~~~I~~lL~~g~IPVisp------l-- 161 (271)
T cd04236 95 RLVKDCK-----TLVEALQANSAAAHPLFSGESVLQAEEPEPGASKGPSVSVDTELLQWCLGSGHIPLVCP------I-- 161 (271)
T ss_pred hHHHHHH-----HHHHHHHhCCCCeeeecCccceEEEEEcccCCccceEEEECHHHHHHHHhCCCeEEECC------c--
Confidence 1111211 2224455555554433 111 1 11111222 2357899999999999999964 2
Q ss_pred CCCCCCcee-ecchhHHHHHHhhcCCCEEEEeccCCccccCCCCCCCccceeeeec-ccchhHHhcCCCCCccCCCc---
Q 006484 165 PYEDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIR-AKHQAEITFGDKSRVGRGGM--- 239 (643)
Q Consensus 165 ~~~~~~~~~-~~~D~~A~~lA~~L~Ad~li~lTdVdGVy~~~P~~p~a~~i~~i~~-~e~~~~~~~g~~~~~~~ggM--- 239 (643)
+.+.+|..+ +|+|.+|+.+|.+|+|++|+|+||++|||+++ +++|++|+. +|+.+++..| .++|||
T Consensus 162 g~~~~G~~~NiNaD~~A~~lA~aL~A~KLIfltd~~GV~~~~-----g~lI~~l~~~~e~~~li~~g----~i~gGm~~k 232 (271)
T cd04236 162 GETSSGRSVSLDSSEVTTAIAKALQPIKVIFLNRSGGLRDQK-----HKVLPQVHLPADLPSLSDAE----WLSETEQNR 232 (271)
T ss_pred eECCCCCEEEECHHHHHHHHHHHcCCCEEEEEeCCcceECCC-----CCCccccCcHHHHHHHHhCC----EEcCCeeec
Confidence 233456667 99999999999999999999999999999752 689999996 8999888875 889999
Q ss_pred hHHHHHHHHHHHcCCcEEEEeCCCcchH-HHHHcCCceeeEE
Q 006484 240 TAKVNAAYCAACAGIPVVITSGFAMDSI-IKVLEGKRVGTLF 280 (643)
Q Consensus 240 ~~Kl~aa~~a~~~gv~v~I~~g~~~~~l-~~~~~g~~~GT~i 280 (643)
+||+++|+.++..|++|+|++ |+.+ .++++....||.|
T Consensus 233 i~ki~~~l~~l~~g~sv~I~~---~~~ll~elft~~g~GT~~ 271 (271)
T cd04236 233 IQDIATLLNALPSMSSAVITS---AETLLTELFSHKGSGTLF 271 (271)
T ss_pred hHHHHHHHHhcccCCeEEEeC---hHHHHHHHhccCCCCCcC
Confidence 999999999999999999998 7776 8899988889964
No 166
>cd04261 AAK_AKii-LysC-BS AAK_AKii-LysC-BS: Amino Acid Kinase Superfamily (AAK), AKii; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the lysine-sensitive aspartokinase isoenzyme AKII of Bacillus subtilis 168, and the lysine plus threonine-sensitive aspartokinase of Corynebacterium glutamicum, and related sequences. In B. subtilis 168, the regulation of the diaminopimelate (Dap)-lysine biosynthetic pathway involves dual control by Dap and lysine, effected through separate Dap- and lysine-sensitive aspartokinase isoenzymes. The B. subtilis 168 AKII is induced by methionine, and repressed and inhibited by lysine. Although Corynebacterium glutamicum is known to contain a single aspartokinase isoenzyme type, both the succinylase and dehydrogenase variant pathways of DAP-lysine synthesis operate simultaneously in this organism. In this organism and other various Gram-positive bacteria, the DAP-lysine pathway is feedback regulated by the concerted action of lysine and
Probab=99.97 E-value=2.1e-29 Score=253.20 Aligned_cols=221 Identities=19% Similarity=0.273 Sum_probs=168.6
Q ss_pred eEEEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcCCCcccccCcccchhHHHH
Q 006484 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKAC 95 (643)
Q Consensus 16 ~iVIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~ 95 (643)
.+||||||+++.+. +.+++++++|+.+++.|+++||||||++..+..+++...... ...+.+ ..+++
T Consensus 1 ~iViK~GGs~l~~~------~~~~~~~~~i~~l~~~g~~~vvV~sg~g~~~~~l~~~~~~~~-~~~~~~------~~~~i 67 (239)
T cd04261 1 LIVQKFGGTSVASI------ERIKRVAERIKKRKKKGNQVVVVVSAMGGTTDELIELAKEIS-PRPPAR------ELDVL 67 (239)
T ss_pred CEEEEECCcccCCH------HHHHHHHHHHHHHHHcCCCEEEEECCCCchhHHHHHHHHHhc-cCCCHH------HHHHH
Confidence 47999999999763 358999999999999999999999987767776654322111 000111 23467
Q ss_pred HHhchHHHHHHHHHHhccCCCCcce-----e-EecccccCcchhhchHHHHHHHHHhCCCeeEecCCCceeccCCCCCCC
Q 006484 96 AAVGQSSLMALYDTLFSQLDVTSSQ-----L-LVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDS 169 (643)
Q Consensus 96 ~a~G~~~~~~~~~~~l~~~g~~~~~-----~-~~t~~~~~~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~~ 169 (643)
.+.|+...+.++...|...|+++.. . +++.+++........+.+.++.++++|+|||++|+-+. . .+
T Consensus 68 ~a~Ge~~~~~l~~~~l~~~g~~a~~l~~~~~~l~~~~~~~~~~i~~~~~~~l~~ll~~~~ipVi~G~~~~-~------~~ 140 (239)
T cd04261 68 LSTGEQVSIALLAMALNRLGIKAISLTGWQAGILTDGHHGKARIIDIDPDRIRELLEEGDVVIVAGFQGI-N------ED 140 (239)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCeEEechhhCCEEecCCCCcceechhhHHHHHHHHHcCCeEEEcCcccc-C------CC
Confidence 8889988887888999999887543 2 34444553222223456899999999999999873211 1 12
Q ss_pred Cce----eecchhHHHHHHhhcCCCEEEEeccCCccccCCCC-CCCccceeeeecccchhHHhcCCCCCccCCCchHHHH
Q 006484 170 SGI----FWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVN 244 (643)
Q Consensus 170 ~~~----~~~~D~~A~~lA~~L~Ad~li~lTdVdGVy~~~P~-~p~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~Kl~ 244 (643)
+.. ++|+|++|+.+|.+|+||+|+++|||||||++||+ +|++++|++|+++|+.++... |.+..|++
T Consensus 141 g~~~~l~rg~sD~~A~~lA~~l~A~~lii~tdV~GVy~~dP~~~~~a~~i~~i~~~ea~~l~~~--------G~~~~~~~ 212 (239)
T cd04261 141 GDITTLGRGGSDTSAVALAAALGADRCEIYTDVDGVYTADPRIVPKARKLDEISYDEMLEMASL--------GAKVLHPR 212 (239)
T ss_pred CCEEecCCCChHHHHHHHHHHcCCCEEEEEeCCCCCCCCCCCCCCCceEccccCHHHHHHHHhc--------cccccCHH
Confidence 222 24999999999999999999999999999999995 799999999999999876542 45688899
Q ss_pred HHHHHHHcCCcEEEEeCCCc
Q 006484 245 AAYCAACAGIPVVITSGFAM 264 (643)
Q Consensus 245 aa~~a~~~gv~v~I~~g~~~ 264 (643)
++..+.++|++++|.|+++|
T Consensus 213 a~~~~~~~~i~i~I~n~~~~ 232 (239)
T cd04261 213 SVELAKKYGVPLRVLSSFSE 232 (239)
T ss_pred HHHHHHHcCCeEEEecCCCC
Confidence 99999999999999999887
No 167
>cd04234 AAK_AK AAK_AK: Amino Acid Kinase Superfamily (AAK), Aspartokinase (AK); this CD includes the N-terminal catalytic domain of aspartokinase (4-L-aspartate-4-phosphotransferase;). AK is the first enzyme in the biosynthetic pathway of the aspartate family of amino acids (lysine, threonine, methionine, and isoleucine) and the bacterial cell wall component, meso-diaminopimelate. It also catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. One mechanism for the regulation of this pathway is by the production of several isoenzymes of aspartokinase with different repressors and allosteric inhibitors. Pairs of ACT domains are proposed to specifically bind amino acids leading to allosteric regulation of the enzyme. In Escherichia coli, three different aspartokinase isoenzymes are regulated specifically by lysine, methionine, and threonine. AK-HSDHI (ThrA) and AK-HSDHII (MetL) are bifunctional enzymes that consist of an N-terminal AK and a C-terminal homoserine dehyd
Probab=99.97 E-value=2.5e-29 Score=250.45 Aligned_cols=214 Identities=22% Similarity=0.301 Sum_probs=172.2
Q ss_pred eEEEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcCCCcccccCcccchhHHHH
Q 006484 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKAC 95 (643)
Q Consensus 16 ~iVIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~ 95 (643)
++|+||||+++.+++ .++.++++|+.+ +.|+++||||||++.+++.+++.. .+
T Consensus 1 ~iViK~GGs~l~~~~------~~~~~~~~i~~l-~~g~~vvvV~Sg~~~~t~~l~~~~--------------------~~ 53 (227)
T cd04234 1 MVVQKFGGTSVASAE------RIKRVADIIKAY-EKGNRVVVVVSAMGGVTDLLIELA--------------------LL 53 (227)
T ss_pred CEEEEECccccCCHH------HHHHHHHHHHHh-hcCCCEEEEEcCCCcccHHHHHHH--------------------HH
Confidence 479999999998743 589999999999 889999999999999998765431 46
Q ss_pred HHhchHHHHHHHHHHhccCCCCcc-----eeEeccccc-CcchhhchHHHHHHHHHhC-CCeeEecCCCceeccCCCCCC
Q 006484 96 AAVGQSSLMALYDTLFSQLDVTSS-----QLLVTDSDF-RDEDFRKQLYDTVQSLLDL-RVIPIFNENDAVSTRKAPYED 168 (643)
Q Consensus 96 ~a~G~~~~~~~~~~~l~~~g~~~~-----~~~~t~~~~-~~~~~~~~~~~~i~~ll~~-g~iPVv~g~d~v~~~~~~~~~ 168 (643)
.++|+..++.++...|...|+++. ++.++..++ .....+.++.+.++.+++. |.|||++|+-+.. .
T Consensus 54 ~s~Ge~~~~~l~~~~l~~~Gi~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~vpVv~g~i~~~-------~ 126 (227)
T cd04234 54 LSFGERLSARLLAAALRDRGIKARSLDARQAGITTDDNHGAARIIEISYERLKELLAEIGKVPVVTGFIGRN-------E 126 (227)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCeEEeCHHHCCEEcCCccchhhHHHHHHHHHHHHHhhCCCEEEecCceecC-------C
Confidence 789999988899999999998875 444554443 2223344567899999999 9999998732211 1
Q ss_pred CCce--e--ecchhHHHHHHhhcCCCEEEEeccCCccccCCCC-CCCccceeeeecccchhHHhcCCCCCccCCCchHHH
Q 006484 169 SSGI--F--WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKV 243 (643)
Q Consensus 169 ~~~~--~--~~~D~~A~~lA~~L~Ad~li~lTdVdGVy~~~P~-~p~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~Kl 243 (643)
++.. + +++|++|+.+|.+|+||+|+|+|||||||+.||+ +|++++|++|+++|+.++... +.++| |+
T Consensus 127 ~g~~~~l~rg~sD~~A~~lA~~l~A~~l~~~tdV~Gvy~~dP~~~~~a~~i~~i~~~e~~~l~~~------G~~~~--~~ 198 (227)
T cd04234 127 DGEITTLGRGGSDYSAAALAAALGADEVEIWTDVDGIYTADPRIVPEARLIPEISYDEALELAYF------GAKVL--HP 198 (227)
T ss_pred CCCEEEeeCCCcHHHHHHHHHHhCCCEEEEEECCCccCCCCCCCCCCceEcCcCCHHHHHHHHhC------Ccccc--CH
Confidence 2222 2 5899999999999999999999999999999996 899999999999999876543 35556 67
Q ss_pred HHHHHHHHcCCcEEEEeCCCcchHHHHHcCCceeeEE
Q 006484 244 NAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLF 280 (643)
Q Consensus 244 ~aa~~a~~~gv~v~I~~g~~~~~l~~~~~g~~~GT~i 280 (643)
+|+..+.++|++++|.|++.|+ ..||+|
T Consensus 199 ~a~~~a~~~~i~i~i~~~~~~~---------~~gT~I 226 (227)
T cd04234 199 RAVEPARKANIPIRVKNTFNPE---------APGTLI 226 (227)
T ss_pred HHHHHHHHcCCeEEEEeCCCCC---------CCCCEe
Confidence 8999999999999999999875 247776
No 168
>cd04249 AAK_NAGK-NC AAK_NAGK-NC: N-Acetyl-L-glutamate kinase - noncyclic (NAGK-NC) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of microbial arginine biosynthesis using the acetylated, noncyclic route of ornithine biosynthesis. There are two variants of this pathway. In one, typified by the pathway in Escherichia coli, glutamate is acetylated by acetyl-CoA and acetylornithine is deacylated hydrolytically. In this pathway, feedback inhibition by arginine occurs at the initial acetylation of glutamate and not at the phosphorylation of NAG by NAGK. Homodimeric NAGK-NC are members of the Amino Acid Kinase Superfamily (AAK).
Probab=99.96 E-value=3.3e-29 Score=253.85 Aligned_cols=236 Identities=25% Similarity=0.282 Sum_probs=166.1
Q ss_pred EEEEeCCcccccCCCccCHHHHHHHHHHHHHHHH-CCCeEEEEeCChhHhhHHHhhhhhhcCCCccc-ccCcccchhHHH
Q 006484 17 LVVKVGTAVVTRSDGRLALGRLGALLEQLKELNS-QGFEIILVSSGAVGVGRQRLRYRKLVNSSLAD-LQKPQNELDGKA 94 (643)
Q Consensus 17 iVIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~-~g~~vvlVhGGg~~i~~~~~~~~~~~~~~~~~-l~~~~~~l~~~~ 94 (643)
+||||||+++++++ .+++++++|+.++. .|.++|||||||++++..+ +. .++.+.|.+ ++.+........
T Consensus 1 ~ViK~GGs~l~~~~------~~~~~~~~i~~~~~~~~~~iVlVhGgg~~~~~~~-~~-~g~~~~~~~g~rvt~~~~l~~~ 72 (252)
T cd04249 1 LVIKLGGALLETEA------ALEQLFSALSEYQQQHNRQLVIVHGGGCVVDELL-KK-LNFPSEKKNGLRVTPKEQIPYI 72 (252)
T ss_pred CEEEEChHHhcChh------hHHHHHHHHHHHHHhCCCCEEEECCCCHHHHHHH-HH-cCCCCEEECCEecCCHHHHHHH
Confidence 48999999998753 47899999998854 5789999999999876644 32 234433332 322211100112
Q ss_pred HHHh-chHHHHHHHHHHhccCCCCccee------Eeccc----ccCcchhh-chHHHHHHHHHhCCCeeEecCCCceecc
Q 006484 95 CAAV-GQSSLMALYDTLFSQLDVTSSQL------LVTDS----DFRDEDFR-KQLYDTVQSLLDLRVIPIFNENDAVSTR 162 (643)
Q Consensus 95 ~~a~-G~~~~~~~~~~~l~~~g~~~~~~------~~t~~----~~~~~~~~-~~~~~~i~~ll~~g~iPVv~g~d~v~~~ 162 (643)
..++ |+... .+.+.+ ...|+++..+ +++.. ++...+.+ .++.+.|+.++++|+|||+++ .++
T Consensus 73 ~~~~~~~~n~-~lv~~l-~~~Gv~a~~l~~~~~~~~~~~~~~~~~~~~G~v~~i~~~~l~~ll~~g~ipVi~~-~g~--- 146 (252)
T cd04249 73 TGALAGTANK-QLMAQA-IKAGLKPVGLSLADGGMTAVTQLDPELGAVGKATANDPSLLNDLLKAGFLPIISS-IGA--- 146 (252)
T ss_pred HHHHcCcccH-HHHHHH-HhCCCCceeeeccCCCEEEEEEcCCCCCcccceEEEcHHHHHHHHHCCCEEEECC-CEE---
Confidence 2222 22211 122233 3566665443 22221 22222222 356899999999999999985 222
Q ss_pred CCCCCCCCcee-ecchhHHHHHHhhcCCCEEEEeccCCccccCCCCCCCccceeeeecccchhHHhcCCCCCccCCCchH
Q 006484 163 KAPYEDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTA 241 (643)
Q Consensus 163 ~~~~~~~~~~~-~~~D~~A~~lA~~L~Ad~li~lTdVdGVy~~~P~~p~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~ 241 (643)
+..+..+ +|+|++|+.+|.+|+|+ ++|+|||||||++|| ++|++|+.+|+++++..+ +++|||.+
T Consensus 147 ----~~~g~~~~~~~D~~A~~lA~~l~A~-~i~ltdv~Gv~~~~~-----~~i~~i~~~e~~~~~~~g----~~~gGm~~ 212 (252)
T cd04249 147 ----DDQGQLMNVNADQAATAIAQLLNAD-LVLLSDVSGVLDADK-----QLISELNAKQAAELIEQG----VITDGMIV 212 (252)
T ss_pred ----CCCCCEeeecHHHHHHHHHHHcCCC-EEEEeCCcccCCCCC-----cCccccCHHHHHHHHhcC----CCcCCcHH
Confidence 2244444 99999999999999999 789999999998754 799999999988776543 78999999
Q ss_pred HHHHHHHHHHcC-CcEEEEeCCCcchHHHHHcCCceeeEE
Q 006484 242 KVNAAYCAACAG-IPVVITSGFAMDSIIKVLEGKRVGTLF 280 (643)
Q Consensus 242 Kl~aa~~a~~~g-v~v~I~~g~~~~~l~~~~~g~~~GT~i 280 (643)
|+++|..+++.| ++++|+||+.|+.|.++++|+..||.|
T Consensus 213 kl~~a~~~~~~~~~~v~I~~g~~~~~l~~~l~g~~~GT~I 252 (252)
T cd04249 213 KVNAALDAAQSLRRGIDIASWQYPEQLTALLAGEPVGTKI 252 (252)
T ss_pred HHHHHHHHHHhCCCeEEEEeCCCccHHHHHHcCCCCCcCC
Confidence 999999998876 569999999999999999999899964
No 169
>PRK14558 pyrH uridylate kinase; Provisional
Probab=99.96 E-value=1.1e-28 Score=246.49 Aligned_cols=222 Identities=23% Similarity=0.347 Sum_probs=168.8
Q ss_pred ceEEEEeCCcccccCCC-ccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcCCCcccccCcccchhHH
Q 006484 15 KRLVVKVGTAVVTRSDG-RLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGK 93 (643)
Q Consensus 15 ~~iVIKlGGs~l~~~~~-~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 93 (643)
+++|||+|||+|+++++ .++.+.++.++++|+++++.|+++|||||||. +.+... ..+. .. .
T Consensus 1 ~riviKlGgs~lt~~~~~~~~~~~i~~la~~i~~~~~~g~~viiV~GgGs-~~~g~~--~~~~-------~~-------~ 63 (231)
T PRK14558 1 KRVLLKLSGEALSGEGEKGFDPERVNYLVNEIKSVVEYGFKIGIVIGAGN-LFRGVE--LKEL-------SP-------T 63 (231)
T ss_pred CeEEEEeeHHHccCCCCCCcCHHHHHHHHHHHHHHHHCCCeEEEEECccH-HHHHHh--ccCC-------Ch-------H
Confidence 47999999999998754 58899999999999999999999999998754 433110 0111 00 0
Q ss_pred HHHHhchHH--HH-HHHHHHhccCCCCcc---eeEecccccCcchhhchHHHHHHHHHhCCCeeEecCCCceeccCCCCC
Q 006484 94 ACAAVGQSS--LM-ALYDTLFSQLDVTSS---QLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYE 167 (643)
Q Consensus 94 ~~~a~G~~~--~~-~~~~~~l~~~g~~~~---~~~~t~~~~~~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~ 167 (643)
....+|+.. +. .++...|..+|+++. |++ ...++. ....+.+..+++.|.|||++||.
T Consensus 64 ~~d~ig~~~~~ln~~~~~~~l~~~gi~a~~~~~~~-~~~~~~-----~~~~~~i~~ll~~g~vpV~~G~~---------- 127 (231)
T PRK14558 64 RADQIGMLGTVINALYLKDIFEKSGLKAVIVSQIV-NLPSVE-----PINYDDIELYFRAGYIVIFAGGT---------- 127 (231)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCeEEecccc-ccchhh-----hhhHHHHHHHHHCCCEEEEECCC----------
Confidence 122233321 22 236889999998853 332 122221 12357899999999999999842
Q ss_pred CCCceeecchhHHHHHHhhcCCCEEEEeccCCccccCCCC-CCCccceeeeecccchhHHhcCCCCCccCCCchHHHHHH
Q 006484 168 DSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAA 246 (643)
Q Consensus 168 ~~~~~~~~~D~~A~~lA~~L~Ad~li~lTdVdGVy~~~P~-~p~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~Kl~aa 246 (643)
+..++++|++|+.+|..|+||.|+++|||||||++||+ +|++++|++|+++|+.++ + ...| +++++
T Consensus 128 --~~~~~~~D~~a~~lA~~l~a~~l~~~tdVdGvy~~dP~~~~~a~~i~~i~~~e~~~~---g------~~~~--d~~a~ 194 (231)
T PRK14558 128 --SNPFFTTDTAAALRAVEMKADILIKATKVDGIYDKDPKKFPDAKKIDHLTFSEAIKM---G------LKVM--DTEAF 194 (231)
T ss_pred --CCCCCCcHHHHHHHHHHcCCCEEEEEecCCeeEccCCCCCCCCeEcccccHHHHHHc---C------cccc--cHHHH
Confidence 12357899999999999999999999999999999995 999999999998877642 2 1223 56788
Q ss_pred HHHHHcCCcEEEEeCCCcchHHHHHcCCceeeEEec
Q 006484 247 YCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHR 282 (643)
Q Consensus 247 ~~a~~~gv~v~I~~g~~~~~l~~~~~g~~~GT~i~~ 282 (643)
..|.++|++++|+||+.++.+...+.|+..||+|.+
T Consensus 195 ~~a~~~gi~v~I~ng~~~~~l~~~l~g~~~GT~i~~ 230 (231)
T PRK14558 195 SICKKYGITILVINFFEPGNLLKALKGENVGTLVVP 230 (231)
T ss_pred HHHHHCCCCEEEEeCCCCCHHHHHHCCCCCcEEeCC
Confidence 888999999999999999999999999989999865
No 170
>cd04252 AAK_NAGK-fArgBP AAK_NAGK-fArgBP: N-Acetyl-L-glutamate kinase (NAGK) of the fungal arginine-biosynthetic pathway (fArgBP). The nuclear-encoded, mitochondrial polyprotein precursor with an N-terminal NAGK (ArgB) domain (this CD), a central DUF619 domain, and a C-terminal reductase domain (ArgC, N-Acetylglutamate Phosphate Reductase, NAGPR). The precursor is cleaved in the mitochondria into two distinct enzymes (NAGK-DUF619 and NAGPR). Native molecular weights of these proteins indicate that the kinase is an octamer whereas the reductase is a dimer. This CD also includes some gamma-proteobacteria (Xanthomonas and Xylella) NAG kinases with an N-terminal NAGK (ArgB) domain (this CD) and a C-terminal DUF619 domain. The DUF619 domain is described as a putative distant homolog of the acetyltransferase, ArgA, predicted to function in NAG synthase association in fungi. Eukaryotic sequences have an N-terminal mitochondrial transit peptide. Members of this NAG kinase domain CD belong to th
Probab=99.96 E-value=6.2e-29 Score=250.45 Aligned_cols=228 Identities=19% Similarity=0.189 Sum_probs=164.1
Q ss_pred EEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcCCCccc-ccCcc---cchhHH
Q 006484 18 VVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLAD-LQKPQ---NELDGK 93 (643)
Q Consensus 18 VIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~~~~~~-l~~~~---~~l~~~ 93 (643)
|||+||+++++. ++.++++|+.|++.|.++|||||||+++.+.+.+ .+++++|.+ ++.+. +...++
T Consensus 2 ViKiGG~~~~~~--------l~~~~~di~~l~~~g~~~VlVHGgg~~i~~~~~~--~gi~~~~~~g~RvT~~~~l~~v~~ 71 (248)
T cd04252 2 VIKVGGAIIEDD--------LDELAASLSFLQHVGLYPIVVHGAGPQLNEELEA--AGVEPEYVDGLRVTDPETLAVARK 71 (248)
T ss_pred EEEEChhhhhcc--------HHHHHHHHHHHHHCCCcEEEEeCCCHHHHHHHHH--cCCCcEeeCCcccCCHHHHHHHHH
Confidence 899999999863 6899999999999999999999999998876533 456666653 33332 222222
Q ss_pred HHHHhchHHHHHHHHHHhccCCCCccee----Eec----ccccCcchhh-chHHHHHHHHHhCCCeeEecCCCceeccCC
Q 006484 94 ACAAVGQSSLMALYDTLFSQLDVTSSQL----LVT----DSDFRDEDFR-KQLYDTVQSLLDLRVIPIFNENDAVSTRKA 164 (643)
Q Consensus 94 ~~~a~G~~~~~~~~~~~l~~~g~~~~~~----~~t----~~~~~~~~~~-~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~ 164 (643)
++ ++... .+...|...|+++..+ +.. ..|+...|.+ ..+.+.|+.+|+.|+|||+++ +++
T Consensus 72 al---~~vn~--~iv~~l~~~g~~a~~l~~~~~~a~~~~~~d~g~~G~v~~i~~~~i~~~L~~g~IPVi~p-~~~----- 140 (248)
T cd04252 72 VF---LEENL--KLVEALERNGARARPITSGVFEAEYLDKDKYGLVGKITGVNKAPIEAAIRAGYLPILTS-LAE----- 140 (248)
T ss_pred HH---HHHHH--HHHHHHHhCCCCcccccCceEEEEECcCccCCccCceeeECHHHHHHHHHCCCeEEECC-ceE-----
Confidence 32 32221 2334455555554332 111 1233323332 356899999999999999975 332
Q ss_pred CCCCCCcee-ecchhHHHHHHhhcCCCEEEEeccCCccccCCCCCCCccceeeeec-ccchhHHhcCCCCCccCCCchHH
Q 006484 165 PYEDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIR-AKHQAEITFGDKSRVGRGGMTAK 242 (643)
Q Consensus 165 ~~~~~~~~~-~~~D~~A~~lA~~L~Ad~li~lTdVdGVy~~~P~~p~a~~i~~i~~-~e~~~~~~~g~~~~~~~ggM~~K 242 (643)
++.+..+ +|+|.+|+.+|.+|+|++|+|+|||+|||+++ +++|++|+. ++..+++..+ ++||||.+|
T Consensus 141 --~~~g~~~nvnaD~~A~~lA~aL~a~kli~ltdv~GV~~~~-----g~~i~~i~~~~~~~~l~~~~----~vtgGM~~K 209 (248)
T cd04252 141 --TPSGQLLNVNADVAAGELARVLEPLKIVFLNETGGLLDGT-----GKKISAINLDEEYDDLMKQP----WVKYGTKLK 209 (248)
T ss_pred --CCCCCEEEECHHHHHHHHHHHcCCCeEEEEECCcccCCCC-----CCcccccCHHHHHHHHHHcC----CcCCchHHH
Confidence 2245556 99999999999999999999999999999752 679999996 4666666533 799999999
Q ss_pred HHHHHHHHHc--CCc-EEEEeCCCcchH-HHHHcCCceeeEE
Q 006484 243 VNAAYCAACA--GIP-VVITSGFAMDSI-IKVLEGKRVGTLF 280 (643)
Q Consensus 243 l~aa~~a~~~--gv~-v~I~~g~~~~~l-~~~~~g~~~GT~i 280 (643)
++++..+.+. ++. |+|++ ++.| .++++.+..||.+
T Consensus 210 l~~~~~~~~~~~~~~~v~i~~---~~~ll~elf~~~g~GT~i 248 (248)
T cd04252 210 IKEIKELLDTLPRSSSVSITS---PDDLQKELFTHSGAGTLI 248 (248)
T ss_pred HHHHHHHHHhCCCceEEEEEC---CchHHHHHhcCCCCCccC
Confidence 9999999887 554 99988 5776 7788888889864
No 171
>cd04260 AAK_AKi-DapG-BS AAK_AKi-DapG-BS: Amino Acid Kinase Superfamily (AAK), AKi-DapG; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the diaminopimelate-sensitive aspartokinase isoenzyme AKI (DapG), a monofunctional class enzyme found in Bacilli (Bacillus subtilis 168), Clostridia, and Actinobacteria bacterial species. In Bacillus subtilis, the regulation of the diaminopimelate-lysine biosynthetic pathway involves dual control by diaminopimelate and lysine, effected through separate diaminopimelate- and lysine-sensitive aspartokinase isoenzymes. AKI activity is invariant during the exponential and stationary phases of growth and is not altered by addition of amino acids to the growth medium. The role of this isoenzyme is most likely to provide a constant level of aspartyl-beta-phosphate for the biosynthesis of diaminopimelate for peptidoglycan synthesis and dipicolinate during sporulation. The B. subtilis AKI is tetrameric consisting of two alpha and two bet
Probab=99.96 E-value=9.3e-29 Score=248.89 Aligned_cols=221 Identities=17% Similarity=0.230 Sum_probs=167.3
Q ss_pred eEEEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEe-----CChhHhhHHHhhhhhhcCCCcccccCcccch
Q 006484 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVS-----SGAVGVGRQRLRYRKLVNSSLADLQKPQNEL 90 (643)
Q Consensus 16 ~iVIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVh-----GGg~~i~~~~~~~~~~~~~~~~~l~~~~~~l 90 (643)
.+|||||||++++++ .+++++++|+.+++.|+++|||| ||++.+++.+.+..... . .+.+. -
T Consensus 1 ~~ViK~GGs~l~~~~------~~~~~~~~I~~~~~~g~~~vvV~sa~g~~G~~~~~~~l~~~~~~~--~---~~~t~--~ 67 (244)
T cd04260 1 IIVQKFGGTSVSTKE------RREQVAKKVKQAVDEGYKPVVVVSAMGRKGDPYATDTLINLVYAE--N---SDISP--R 67 (244)
T ss_pred CEEEEECchhcCCHH------HHHHHHHHHHHHHHCCCCeEEEEECCCCCCCchHHHHHHHHHHhh--c---CCCCH--H
Confidence 379999999998754 57899999999999999988888 45555555443322111 1 11111 0
Q ss_pred hHHHHHHhchHHHHHHHHHHhccCCCCccee------EecccccCcchhhchHHHHHHHHHhCCCeeEecCCCceeccCC
Q 006484 91 DGKACAAVGQSSLMALYDTLFSQLDVTSSQL------LVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKA 164 (643)
Q Consensus 91 ~~~~~~a~G~~~~~~~~~~~l~~~g~~~~~~------~~t~~~~~~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~ 164 (643)
..+.+.++|+..++.++...|...|+++.++ +++.+++.+......+.+.++.+++.|+|||++|+-+. .
T Consensus 68 ~~~~~~~~Ge~~~~~~~~~~l~~~Gi~a~~l~~~~~~lit~~~~~~~~v~~~~~~~l~~ll~~g~VPVv~g~~~~-~--- 143 (244)
T cd04260 68 ELDLLMSCGEIISAVVLTSTLRAQGLKAVALTGAQAGILTDDNYSNAKIIKVNPKKILSALKEGDVVVVAGFQGV-T--- 143 (244)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHhCCCCeEEechHHcCEEecCCCCceeeeccCHHHHHHHHhCCCEEEecCCccc-C---
Confidence 1346788999999888999999999998876 45655554332223356789999999999999872111 1
Q ss_pred CCCCCCcee----ecchhHHHHHHhhcCCCEEEEeccCCccccCCCC-CCCccceeeeecccchhHHhcCCCCCccCCCc
Q 006484 165 PYEDSSGIF----WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGM 239 (643)
Q Consensus 165 ~~~~~~~~~----~~~D~~A~~lA~~L~Ad~li~lTdVdGVy~~~P~-~p~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM 239 (643)
..+... +++|++|+.+|.+|+|++|+|+|||||||++||+ +|++++|++|+++|+.++...|.+
T Consensus 144 ---~~g~~~~l~rg~sD~~A~~lA~~l~A~~l~~~tDV~GVy~~dP~~~~~a~~i~~i~~~e~~~l~~~g~~-------- 212 (244)
T cd04260 144 ---EDGEVTTLGRGGSDTTAAALGAALNAEYVEIYTDVDGIMTADPRVVPNARILDVVSYNEVFQMAHQGAK-------- 212 (244)
T ss_pred ---CCCCEEEeCCCchHHHHHHHHHHcCCCEEEEEECCCcCCcCCCCCCCCCeEcccCCHHHHHHHHHcCch--------
Confidence 122222 4799999999999999999999999999999996 789999999999999987765432
Q ss_pred hHHHHHHHHHHHcCCcEEEEeCCCc
Q 006484 240 TAKVNAAYCAACAGIPVVITSGFAM 264 (643)
Q Consensus 240 ~~Kl~aa~~a~~~gv~v~I~~g~~~ 264 (643)
..|++|+..+.+.|++++|.|+++|
T Consensus 213 v~~~~a~~~~~~~~i~v~I~~~~~~ 237 (244)
T cd04260 213 VIHPRAVEIAMQANIPIRIRSTMSE 237 (244)
T ss_pred hcCHHHHHHHHHcCCeEEEecCCCC
Confidence 4678899999999999999999875
No 172
>cd04238 AAK_NAGK-like AAK_NAGK-like: N-Acetyl-L-glutamate kinase (NAGK)-like . Included in this CD are the Escherichia coli and Pseudomonas aeruginosa type NAGKs which catalyze the phosphorylation of N-acetyl-L-glutamate (NAG) by ATP in the second step of arginine biosynthesis found in bacteria and photosynthetic organisms using either the acetylated, noncyclic (NC), or non-acetylated, cyclic (C) route of ornithine biosynthesis. Also included in this CD is a distinct group of uncharacterized (UC) bacterial and archeal NAGKs. Members of this CD belong to the Amino Acid Kinase Superfamily (AAK).
Probab=99.96 E-value=7.8e-29 Score=251.83 Aligned_cols=236 Identities=23% Similarity=0.331 Sum_probs=167.8
Q ss_pred EEEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcCCCccc-ccCccc-chhHHH
Q 006484 17 LVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLAD-LQKPQN-ELDGKA 94 (643)
Q Consensus 17 iVIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~~~~~~-l~~~~~-~l~~~~ 94 (643)
+||||||+++++++ .+..++++|+.|++.|.++|||||||+++ +.+++.+ +...++.+ ++.+.. .+. ..
T Consensus 1 ~ViKlGGs~l~~~~------~~~~~~~~i~~l~~~g~~~VlVhG~g~~~-~~~~~~~-~~~~~~~~~~r~t~~~~l~-~~ 71 (256)
T cd04238 1 VVIKYGGSAMKDEE------LKEAFADDIVLLKQVGINPVIVHGGGPEI-NELLKRL-GIESEFVNGLRVTDKETME-IV 71 (256)
T ss_pred CEEEEChHHhcCcc------HHHHHHHHHHHHHHCCCCEEEECCCcHHH-HHHHHHC-CCCCEeECCeecCCHHHHH-HH
Confidence 58999999999864 36899999999999999999999987754 4444432 23322221 221110 011 11
Q ss_pred HHHh-chHHHHHHHHHHhccCCCCccee------Eeccc-------ccCcchh-hchHHHHHHHHHhCCCeeEecCCCce
Q 006484 95 CAAV-GQSSLMALYDTLFSQLDVTSSQL------LVTDS-------DFRDEDF-RKQLYDTVQSLLDLRVIPIFNENDAV 159 (643)
Q Consensus 95 ~~a~-G~~~~~~~~~~~l~~~g~~~~~~------~~t~~-------~~~~~~~-~~~~~~~i~~ll~~g~iPVv~g~d~v 159 (643)
..++ |.... .+...|++.|+++..+ +++.. ++...+. ...+.+.|+.++++|+|||+++ +
T Consensus 72 ~~a~~g~ln~--~i~~~L~~~Gv~a~~l~~~~~~~~~~~~~~~~~~~~~~~g~i~~i~~~~l~~ll~~g~ipVv~~---~ 146 (256)
T cd04238 72 EMVLAGKVNK--ELVSLLNRAGGKAVGLSGKDGGLIKAEKKEEKDIDLGFVGEVTEVNPELLETLLEAGYIPVIAP---I 146 (256)
T ss_pred HHHHcCchHH--HHHHHHHhCCCCCCCcccccCCEEEEEECCCCCCCcccccceEEECHHHHHHHHHCCCEEEECC---c
Confidence 2233 53332 3457777777665433 22221 1111122 2245789999999999999974 1
Q ss_pred eccCCCCCCCCce-eecchhHHHHHHhhcCCCEEEEeccCCccccCCCCCCCccceeeeecccchhHHhcCCCCCccCCC
Q 006484 160 STRKAPYEDSSGI-FWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGG 238 (643)
Q Consensus 160 ~~~~~~~~~~~~~-~~~~D~~A~~lA~~L~Ad~li~lTdVdGVy~~~P~~p~a~~i~~i~~~e~~~~~~~g~~~~~~~gg 238 (643)
.. +..+.. ++|+|++|+.+|.+|+||+|+|+|||||||++ | +++|++|+++|+.+++.. .+++||
T Consensus 147 ~~-----~~~g~~~~~~~D~~A~~lA~~l~a~~li~ltdv~Gv~~~-~----~~~i~~i~~~e~~~~~~~----~~~~gg 212 (256)
T cd04238 147 AV-----DEDGETYNVNADTAAGAIAAALKAEKLILLTDVPGVLDD-P----GSLISELTPKEAEELIED----GVISGG 212 (256)
T ss_pred EE-----CCCCcEEEECHHHHHHHHHHHcCCCEEEEEeCCccccCC-C----CCccccCCHHHHHHHHHc----CCCCCC
Confidence 11 123444 49999999999999999999999999999987 3 789999999988876643 377999
Q ss_pred chHHHHHHHHHHHcCCc-EEEEeCCCcchHHHHHcC-CceeeEE
Q 006484 239 MTAKVNAAYCAACAGIP-VVITSGFAMDSIIKVLEG-KRVGTLF 280 (643)
Q Consensus 239 M~~Kl~aa~~a~~~gv~-v~I~~g~~~~~l~~~~~g-~~~GT~i 280 (643)
|.+|+++|..+++.|++ |+|+||+.|++|...+.+ +..||.|
T Consensus 213 m~~Kl~~a~~~~~~g~~~v~I~~g~~~~~l~~~l~~~~~~GT~i 256 (256)
T cd04238 213 MIPKVEAALEALEGGVRKVHIIDGRVPHSLLLELFTDEGIGTMI 256 (256)
T ss_pred hHHHHHHHHHHHHhCCCEEEEeCCCCCcHHHHHHhcCCCCCCCC
Confidence 99999999999999886 999999999999776665 5678864
No 173
>cd04251 AAK_NAGK-UC AAK_NAGK-UC: N-Acetyl-L-glutamate kinase - uncharacterized (NAGK-UC). This domain is similar to Escherichia coli and Pseudomonas aeruginosa NAGKs which catalyze the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of microbial arginine biosynthesis. These uncharacterized domain sequences are found in some bacteria (Deinococci and Chloroflexi) and archea and belong to the Amino Acid Kinase Superfamily (AAK).
Probab=99.96 E-value=4.6e-29 Score=252.70 Aligned_cols=226 Identities=27% Similarity=0.348 Sum_probs=161.2
Q ss_pred EEEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcCCCccc------ccCcccch
Q 006484 17 LVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLAD------LQKPQNEL 90 (643)
Q Consensus 17 iVIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~~~~~~------l~~~~~~l 90 (643)
+||||||+++++ ++.++++|+.| |.++|||||||+++...+.. .+++++|.+ .+.+....
T Consensus 1 ~VIKlGGs~l~~---------~~~~~~~i~~l---g~~~VlVHGgg~~i~~~~~~--~gi~~~~~~~~~G~~~Rvt~~~~ 66 (257)
T cd04251 1 IVVKIGGSVVSD---------LDKVIDDIANF---GERLIVVHGGGNYVNEYLKR--LGVEPKFVTSPSGIRSRYTDKET 66 (257)
T ss_pred CEEEEChHHhhC---------hHHHHHHHHHc---CCCEEEECCCHHHHHHHHHH--cCCCcEEEeCCCCCccccCCHHH
Confidence 589999999985 36799999988 88999999999987765432 345544432 12222111
Q ss_pred hHHHHHHhchHHHHHHHHHHhccCCCCcceeEe-----cccccC--------------cc---hh-hchHHHHHHHHHhC
Q 006484 91 DGKACAAVGQSSLMALYDTLFSQLDVTSSQLLV-----TDSDFR--------------DE---DF-RKQLYDTVQSLLDL 147 (643)
Q Consensus 91 ~~~~~~a~G~~~~~~~~~~~l~~~g~~~~~~~~-----t~~~~~--------------~~---~~-~~~~~~~i~~ll~~ 147 (643)
......++++... .+...|.+.|+++..+.- ...++. +. +. ...+.+.|+.++++
T Consensus 67 l~~~~~a~~~ln~--~iv~~L~~~Gi~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~G~v~~v~~~~i~~ll~~ 144 (257)
T cd04251 67 LEVFVMVMGLINK--KIVARLHSLGVKAVGLTGLDGRLLEAKRKEIVRVNERGRKMIIRGGYTGKVEKVNSDLIEALLDA 144 (257)
T ss_pred HHHHHHHHHHHHH--HHHHHHHhCCCCceecccccCCEEEEEEeecccccccCcccccCCcceEEEEEEcHHHHHHHHhC
Confidence 1112233343332 234566666765433211 001110 11 11 23568999999999
Q ss_pred CCeeEecCCCceeccCCCCCCCCcee-ecchhHHHHHHhhcCCCEEEEeccCCccccCCCCCCCccceeeeecccchhHH
Q 006484 148 RVIPIFNENDAVSTRKAPYEDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEI 226 (643)
Q Consensus 148 g~iPVv~g~d~v~~~~~~~~~~~~~~-~~~D~~A~~lA~~L~Ad~li~lTdVdGVy~~~P~~p~a~~i~~i~~~e~~~~~ 226 (643)
|+|||+++ . .++..+..+ +|+|++|+.+|.+|+||+|+|+|||+|||++ +++|++|+++|+.+++
T Consensus 145 g~vpVi~~--~------~~~~~G~~~~i~~D~~A~~lA~~L~A~~li~~tdv~Gv~~~------~~~i~~i~~~e~~~l~ 210 (257)
T cd04251 145 GYLPVVSP--V------AYSEEGEPLNVDGDRAAAAIAAALKAERLILLTDVEGLYLD------GRVIERITVSDAESLL 210 (257)
T ss_pred CCeEEEeC--c------EECCCCcEEecCHHHHHHHHHHHcCCCEEEEEeCChhheeC------CcccCccCHHHHHHHH
Confidence 99999963 1 122345555 9999999999999999999999999999975 6899999999888765
Q ss_pred hcCCCCCccCCCchHHHHHHHHHHHcCCc-EEEEeCCCcchHHHHHcCCceeeEE
Q 006484 227 TFGDKSRVGRGGMTAKVNAAYCAACAGIP-VVITSGFAMDSIIKVLEGKRVGTLF 280 (643)
Q Consensus 227 ~~g~~~~~~~ggM~~Kl~aa~~a~~~gv~-v~I~~g~~~~~l~~~~~g~~~GT~i 280 (643)
. +++|||.+|+++|..++++|++ +||++|+.|+.+..++.|+ ||.|
T Consensus 211 ~------~~~ggm~~Kl~aa~~a~~~gv~~v~i~~g~~~~~l~~~l~g~--gT~i 257 (257)
T cd04251 211 E------KAGGGMKRKLLAAAEAVEGGVREVVIGDARADSPISSALNGG--GTVI 257 (257)
T ss_pred h------hCCCchHHHHHHHHHHHHcCCCEEEEecCCCccHHHHHHcCC--CcCC
Confidence 2 5899999999999999999997 9999999999998888764 7753
No 174
>TIGR00761 argB acetylglutamate kinase. This model describes N-acetylglutamate kinases (ArgB) of many prokaryotes and the N-acetylglutamate kinase domains of multifunctional proteins from yeasts. This enzyme is the second step in the "acetylated" ornithine biosynthesis pathway. A related group of enzymes representing the first step of the pathway contain a homologous domain and are excluded from this model.
Probab=99.96 E-value=2.9e-28 Score=243.99 Aligned_cols=215 Identities=26% Similarity=0.334 Sum_probs=153.8
Q ss_pred eEEEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcCCCccc-ccCccc-chhHH
Q 006484 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLAD-LQKPQN-ELDGK 93 (643)
Q Consensus 16 ~iVIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~~~~~~-l~~~~~-~l~~~ 93 (643)
++||||||++++++ +.+++++|+.|++.|.++|||||||+++...+ ... ++..++.+ ++.+.. .+...
T Consensus 1 ~~ViK~GGs~l~~~--------~~~~~~~i~~l~~~g~~~VlVhggg~~~~~~~-~~~-~~~~~~~~g~r~t~~~~~~~~ 70 (231)
T TIGR00761 1 TIVIKIGGAAISDL--------LEAFASDIAFLRAVGIKPVIVHGGGPEINELL-EAL-GIPPEFKNGLRVTDKETLEVV 70 (231)
T ss_pred CEEEEEChHHHhcc--------HHHHHHHHHHHHHcCCCEEEEcCCcHHHHHHH-HHc-CCCCEecCCCccCCHHHHHHH
Confidence 58999999999864 68999999999999999999999988765543 322 23322221 221110 01111
Q ss_pred HHHHhchHHHHHHHHHHhccCCCCccee------Eecccc-----cCcchh-hchHHHHHHHHHhCCCeeEecCCCceec
Q 006484 94 ACAAVGQSSLMALYDTLFSQLDVTSSQL------LVTDSD-----FRDEDF-RKQLYDTVQSLLDLRVIPIFNENDAVST 161 (643)
Q Consensus 94 ~~~a~G~~~~~~~~~~~l~~~g~~~~~~------~~t~~~-----~~~~~~-~~~~~~~i~~ll~~g~iPVv~g~d~v~~ 161 (643)
..+..|+.. ..+...|.+.|+++.++ +++... +...+. ...+.+.|+.++++|+|||++| .++
T Consensus 71 ~~~~~g~~~--~~i~~~L~~~G~~a~~l~~~~~~~it~~~~~~~~~~~~g~i~~i~~~~i~~~l~~g~IPVi~~-~~~-- 145 (231)
T TIGR00761 71 EMVLIGQVN--KELVALLNKHGINAIGLTGGDGQLFTARSLDKEDLGYVGEIKKVNKALLEALLKAGYIPVISS-LAL-- 145 (231)
T ss_pred HHHHhcchH--HHHHHHHHhCCCCcccccCCCCCEEEEEECCCccCCcccceEEEcHHHHHHHHHCCCeEEECC-Ccc--
Confidence 112244333 23446787888776654 333222 222222 2245899999999999999986 221
Q ss_pred cCCCCCCCCcee-ecchhHHHHHHhhcCCCEEEEeccCCccccCCCCCCCccceeeeecccchhHHhcCCCCCccCCCch
Q 006484 162 RKAPYEDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMT 240 (643)
Q Consensus 162 ~~~~~~~~~~~~-~~~D~~A~~lA~~L~Ad~li~lTdVdGVy~~~P~~p~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~ 240 (643)
+..+..+ +|+|++|+.+|.+|+|++|+|+|||||||++|| +++|++|+.+|+.+++..+ +++|||.
T Consensus 146 -----~~~g~~~~l~sD~~A~~lA~~l~A~~li~ltdv~Gv~~~d~----~~~i~~i~~~e~~~l~~~~----~~tggm~ 212 (231)
T TIGR00761 146 -----TAEGQALNVNADTAAGALAAALGAEKLVLLTDVPGILNGDG----QSLISEIPLEEIEQLIEQG----IITGGMI 212 (231)
T ss_pred -----CCCCcEEEeCHHHHHHHHHHHcCCCEEEEEECCCCeecCCC----CeeccccCHHHHHHHHHcC----CCCCchH
Confidence 1244444 999999999999999999999999999999976 4799999999988876543 7899999
Q ss_pred HHHHHHHHHHHcCCc-EEE
Q 006484 241 AKVNAAYCAACAGIP-VVI 258 (643)
Q Consensus 241 ~Kl~aa~~a~~~gv~-v~I 258 (643)
+|+++|..+++.|++ +||
T Consensus 213 ~Kl~~a~~a~~~gv~~v~i 231 (231)
T TIGR00761 213 PKVNAALEALRGGVKSVHI 231 (231)
T ss_pred HHHHHHHHHHHcCCCEEEC
Confidence 999999999999998 765
No 175
>PRK12354 carbamate kinase; Reviewed
Probab=99.96 E-value=4.4e-28 Score=245.46 Aligned_cols=248 Identities=24% Similarity=0.277 Sum_probs=165.0
Q ss_pred ceEEEEeCCcccccCCCcc--C--HHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcCCCcccccCcccch
Q 006484 15 KRLVVKVGTAVVTRSDGRL--A--LGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNEL 90 (643)
Q Consensus 15 ~~iVIKlGGs~l~~~~~~~--~--~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~~~~~~l~~~~~~l 90 (643)
+++|||||||+|.+++... + .++++..++.|+.+.+ |+++||+||+|||+|..+.+....... ..++|
T Consensus 1 ~~iVialGGnal~~~~~~~~~~~~~~~v~~~a~~ia~~~~-~~~vvi~HGnGpqvG~~~~~~~~~~~~-------~~~pl 72 (307)
T PRK12354 1 MRIVVALGGNALLRRGEPLTAENQRANIRIAAEQIAKIAR-EHELVIVHGNGPQVGLLALQNAAYKDV-------TPYPL 72 (307)
T ss_pred CeEEEEeccHHhCCCCCCcCHHHHHHHHHHHHHHHHHHhC-CCeEEEEeCCccHHhHHHHHHHHhcCC-------CCCCc
Confidence 3799999999999876433 3 4488899999999988 999999999999999655432211110 11111
Q ss_pred hHHHHHHhchHHHH--HHHHHHhccCCCC--cceeEecccc--cC-----------------------------cchhh-
Q 006484 91 DGKACAAVGQSSLM--ALYDTLFSQLDVT--SSQLLVTDSD--FR-----------------------------DEDFR- 134 (643)
Q Consensus 91 ~~~~~~a~G~~~~~--~~~~~~l~~~g~~--~~~~~~t~~~--~~-----------------------------~~~~~- 134 (643)
......+.|..+.+ +.+.+.+....+. ..|+.+..+| |. .++++
T Consensus 73 ~~~~a~sqg~iGy~l~q~l~~~l~~~~v~tivtq~~Vd~~dpAf~~ptKpiG~~y~~~~a~~~~~e~g~~~~~dg~g~rr 152 (307)
T PRK12354 73 DVLGAETEGMIGYMLEQELGNLLPERPVATLLTQVEVDANDPAFANPTKPIGPVYDEAEAERLAAEKGWTIKPDGDYFRR 152 (307)
T ss_pred chhcccccchHHHHHHHHHHHHhcCCcceEEEEEEEEcCCCCccCCCCCCcCcccCHHHHHHHHHhcCCEEeecCCceEE
Confidence 11112223333322 2223344221111 1122221111 10 01111
Q ss_pred ---------chHHHHHHHHHhCCCeeEecCCCceeccCCCCC--CCCce-eecchhHHHHHHhhcCCCEEEEeccCCccc
Q 006484 135 ---------KQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYE--DSSGI-FWDNDSLAGLLALELKADLLVLLSDVEGLY 202 (643)
Q Consensus 135 ---------~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~--~~~~~-~~~~D~~A~~lA~~L~Ad~li~lTdVdGVy 202 (643)
..+.+.|+.|+++|+|||..|+.++.... +.. ..+.. ++|+|.+|+.||.+|+||+|+|+|||||||
T Consensus 153 Vv~SP~P~~ive~~~I~~Ll~~g~ivIa~GGGGIPV~~-~~~~~~~gv~aViD~D~~Aa~LA~~l~Ad~LiiLTdVdGVy 231 (307)
T PRK12354 153 VVPSPRPKRIVEIRPIRWLLEKGHLVICAGGGGIPVVY-DADGKLHGVEAVIDKDLAAALLAEQLDADLLLILTDVDAVY 231 (307)
T ss_pred EecCCCCcceeCHHHHHHHHHCCCEEEEeCCCccCeEe-cCCCceeeeeecCCccHHHHHHHHHcCCCEEEEEeCCccee
Confidence 13578999999999987776655554321 100 01111 589999999999999999999999999999
Q ss_pred cCCCCCCCccceeeeecccchhHHhcCCCCCccCCCchHHHHHHHHHHHcCC-cEEEEeCCCcchHHHHHcCCceeeEEe
Q 006484 203 SGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGI-PVVITSGFAMDSIIKVLEGKRVGTLFH 281 (643)
Q Consensus 203 ~~~P~~p~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gv-~v~I~~g~~~~~l~~~~~g~~~GT~i~ 281 (643)
++++ +|++++|++++.+|+.++ .+++|||.||+++|..+++.|. +++|.+ ++.+.+++.|+ .||+|.
T Consensus 232 ~~~~-~p~~k~i~~it~~e~~~~-------~f~~GgM~pKV~AA~~~~~~gg~~viI~~---~~~l~~al~G~-~GT~I~ 299 (307)
T PRK12354 232 LDWG-KPTQRAIAQATPDELREL-------GFAAGSMGPKVEAACEFVRATGKIAGIGS---LEDIQAILAGE-AGTRIS 299 (307)
T ss_pred cCCC-CCCCeECCCCCHHHHHhh-------CCCcCChHHHHHHHHHHHHhCCCEEEECC---HHHHHHHHCCC-CceEEe
Confidence 9854 688999999999888764 2679999999999999887765 488854 66788888886 799998
Q ss_pred cC
Q 006484 282 RD 283 (643)
Q Consensus 282 ~~ 283 (643)
..
T Consensus 300 ~~ 301 (307)
T PRK12354 300 PE 301 (307)
T ss_pred cC
Confidence 75
No 176
>TIGR02075 pyrH_bact uridylate kinase. This protein, also called UMP kinase, converts UMP to UDP by adding a phosphate from ATP. It is the first step in pyrimidine biosynthesis. GTP is an allosteric activator. In a large fraction of all bacterial genomes, the gene tends to be located immediately downstream of elongation factor Ts and upstream of ribosome recycling factor. A related protein family, believed to be equivalent in function and found in the archaea and in spirochetes, is described by a separate model, TIGR02076.
Probab=99.96 E-value=1.3e-27 Score=238.94 Aligned_cols=229 Identities=19% Similarity=0.270 Sum_probs=166.8
Q ss_pred cceEEEEeCCcccccCCC-ccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHh-hHHHhhhhhhcCCCcccccCcccchh
Q 006484 14 VKRLVVKVGTAVVTRSDG-RLALGRLGALLEQLKELNSQGFEIILVSSGAVGV-GRQRLRYRKLVNSSLADLQKPQNELD 91 (643)
Q Consensus 14 ~~~iVIKlGGs~l~~~~~-~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i-~~~~~~~~~~~~~~~~~l~~~~~~l~ 91 (643)
++++|||||||++++... .++.+++++++++|+++...|+++|||||||..+ ++. .+.+. ....+ .+
T Consensus 1 ~~~iViKlGGs~i~~~~~~~~~~~~i~~~a~~i~~~~~~~~~vviV~G~Gs~~~~~~-a~~~~-~~~~~--~d------- 69 (233)
T TIGR02075 1 YKRVLLKLSGEALAGESGFGIDPDRLNRIANEIKELVKMGIEVGIVIGGGNIFRGVS-AKELG-IDRVT--AD------- 69 (233)
T ss_pred CCEEEEEeChhhcCCCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEECCCHHHHHHH-HHhcC-CCCcc--HH-------
Confidence 478999999999997322 4778899999999999998899999999986533 332 12111 11000 11
Q ss_pred HHHHHHhchHHHHHHHHHHhccCCCCcceeEecccccCcchhhchHHHHHHHHHhCCCeeEecCCCceeccCCCCCCCCc
Q 006484 92 GKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSG 171 (643)
Q Consensus 92 ~~~~~a~G~~~~~~~~~~~l~~~g~~~~~~~~t~~~~~~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~~~~ 171 (643)
.+.+.++.....++...|...|+++.. ++..++... ......+.++.++++|.|||++|++ |.
T Consensus 70 --~~g~~~~~l~~~l~~~~L~~~Gi~a~~--l~~~~~~~~-~~~~~~~~i~~ll~~g~VpV~~g~~------------g~ 132 (233)
T TIGR02075 70 --YMGMLATVINGLALRDALEKLGVKTRV--LSAISMPQI-CESYIRRKAIKHLEKGKVVIFSGGT------------GN 132 (233)
T ss_pred --HHHHHHHHHHHHHHHHHHHhCCCCcEE--eccccCCCC-ccccCHHHHHHHHHCCCEEEEECCC------------CC
Confidence 122222222222446888889987632 332222211 1112257888999999999997522 22
Q ss_pred eeecchhHHHHHHhhcCCCEEEEecc-CCccccCCCC-CCCccceeeeecccchhHHhcCCCCCccCCCchHHHHHHHHH
Q 006484 172 IFWDNDSLAGLLALELKADLLVLLSD-VEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCA 249 (643)
Q Consensus 172 ~~~~~D~~A~~lA~~L~Ad~li~lTd-VdGVy~~~P~-~p~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a 249 (643)
.++++|++|+.+|..|+||+|+|+|| |||||++||+ +|++++|++|+++|+.+. + .. ..++.++..+
T Consensus 133 ~~~s~D~~a~~lA~~l~a~~li~~td~VdGvy~~dp~~~~~a~~i~~i~~~e~~~~---~------~~--~~d~~~~~~a 201 (233)
T TIGR02075 133 PFFTTDTAAALRAIEINADVILKGTNGVDGVYTADPKKNKDAKKYETITYNEALKK---N------LK--VMDLTAFALA 201 (233)
T ss_pred CCCCchHHHHHHHHHcCCCEEEEeecccCeEEcCCCCCCCCCeECcEecHHHHHhc---C------HH--HHHHHHHHHH
Confidence 35889999999999999999999999 9999999995 899999999998886531 1 11 3467888889
Q ss_pred HHcCCcEEEEeCCCcchHHHHHcCCceeeEEe
Q 006484 250 ACAGIPVVITSGFAMDSIIKVLEGKRVGTLFH 281 (643)
Q Consensus 250 ~~~gv~v~I~~g~~~~~l~~~~~g~~~GT~i~ 281 (643)
.+.|++++|+||..|+.|..++.|+..||+|.
T Consensus 202 ~~~~i~v~i~~g~~~~~l~~~l~g~~~GT~i~ 233 (233)
T TIGR02075 202 RDNNLPIVVFNIDEPGALKKVILGKGIGTLVS 233 (233)
T ss_pred HHCCCeEEEEeCCCcchHHHHHCCCCCCEEeC
Confidence 99999999999999999999999998999873
No 177
>cd04255 AAK_UMPK-MosAB AAK_UMPK-MosAB: This CD includes the alpha and beta subunits of the Mo storage protein (MosA and MosB) which are related to uridine monophosphate kinase (UMPK) enzymes that catalyze the phosphorylation of UMP by ATP, yielding UDP, and playing a key role in pyrimidine nucleotide biosynthesis. The Mo storage protein from the nitrogen-fixing bacterium, Azotobacter vinelandii, is characterized as an alpha4-beta4 octamer containing a polynuclear molybdenum-oxide cluster which is ATP-dependent to bind Mo and pH-dependent to release Mo. These and related bacterial sequences in this CD are members of the Amino Acid Kinase Superfamily (AAK).
Probab=99.96 E-value=1e-27 Score=241.82 Aligned_cols=229 Identities=20% Similarity=0.250 Sum_probs=166.7
Q ss_pred ceEEEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcCCCcccccCcccchhHHH
Q 006484 15 KRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKA 94 (643)
Q Consensus 15 ~~iVIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~~~~~~l~~~~~~l~~~~ 94 (643)
..+|||+|||++++++ .+.+++++++|+++++ +++++||||||. ++|....... ..+ + ....+.+++
T Consensus 31 ~~~ViKiGGSvitdk~----~~~i~~la~~i~~~~~-~~~vilV~GGG~-~~r~~~~~~~--~~g---~--~~~~~~~~~ 97 (262)
T cd04255 31 DLNVVKIGGQSIIDRG----AEAVLPLVEEIVALRP-EHKLLILTGGGT-RARHVYSIGL--DLG---M--PTGVLAKLG 97 (262)
T ss_pred CcEEEEeccceecCCc----HHHHHHHHHHHHHHhC-CCcEEEEECCHH-HHHHHHHHHH--HcC---C--CchHHHHHH
Confidence 3589999999999875 4678999999999976 689999999977 4564332111 101 1 111233567
Q ss_pred HHHhchHHHHHHHHHHhccCCCCcceeEecccccCcchhhchHHHHHHHHHhCCCeeEecCCCceeccCCCCCCCCc--e
Q 006484 95 CAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSG--I 172 (643)
Q Consensus 95 ~~a~G~~~~~~~~~~~l~~~g~~~~~~~~t~~~~~~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~~~~--~ 172 (643)
+++.+++.++ .+..|..+|++. ++..+ ...++.+|+.|+|||++|++++....+. +.++ .
T Consensus 98 ~aa~~ln~lv--~~~~l~~~g~~~----i~~~~----------~~~l~~lL~~g~vPVi~g~~~~~~~~i~--~~~g~~~ 159 (262)
T cd04255 98 ASVSEQNAEM--LATLLAKHGGSK----VGHGD----------LLQLPTFLKAGRAPVISGMPPYGLWEHP--AEEGRIP 159 (262)
T ss_pred HHHHHHHHHH--HHHHHHHcCCCc----ccccc----------HHHHHHHHHCCCeEEEeCCcCCCeeeec--CCCccCC
Confidence 7788887653 256676777653 12222 2358999999999999998754332111 1223 3
Q ss_pred eecchhHHHHHHhhcCCCEEEEeccCCccccCCCC-CCCccceeeeecccchhHHhcCCCCCccCCCchHHHHHHHHHHH
Q 006484 173 FWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAAC 251 (643)
Q Consensus 173 ~~~~D~~A~~lA~~L~Ad~li~lTdVdGVy~~~P~-~p~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~ 251 (643)
++|+|++|+++|.+|+||+|+++|||||||++||+ +|++++|++|+++++.+....+ ...+++|..|++++ +
T Consensus 160 ~~~~D~~Aa~lA~~l~ad~li~~TdVdGVy~~dP~~~~~a~~i~~i~~~~~~~~~~~~---~~~~~~~~~~l~aa----~ 232 (262)
T cd04255 160 PHRTDVGAFLLAEVIGARNLIFVKDEDGLYTADPKKNKKAEFIPEISAAELLKKDLDD---LVLERPVLDLLQNA----R 232 (262)
T ss_pred CCCcHHHHHHHHHHhCCCEEEEEeccCeeECCCCCCCCCCeEccEeCHHHHHHHhcCC---CCCcHHHHHHHHHh----C
Confidence 59999999999999999999999999999999995 7999999999987776543111 12467777776654 3
Q ss_pred cCCcEEEEeCCCcchHHHHHcCCceeeEEe
Q 006484 252 AGIPVVITSGFAMDSIIKVLEGKRVGTLFH 281 (643)
Q Consensus 252 ~gv~v~I~~g~~~~~l~~~~~g~~~GT~i~ 281 (643)
..++++|+||+.|+.|.+++.|+..||++.
T Consensus 233 ~~~~v~I~~g~~~~~L~~~l~g~~~GT~i~ 262 (262)
T cd04255 233 HVKEVQIVNGLVPGNLTRALRGEHVGTIIR 262 (262)
T ss_pred CCCcEEEEeCCCCCHHHHHHcCCCCceEeC
Confidence 336899999999999999999988999873
No 178
>PF00696 AA_kinase: Amino acid kinase family Match to Glutamate-5-kinases, C-terminal end of the alignment Match to Aspartate kinases; InterPro: IPR001048 This entry contains proteins with various specificities and includes the aspartate, glutamate and uridylate kinase families. In prokaryotes and plants the synthesis of the essential amino acids lysine and threonine is predominantly regulated by feed-back inhibition of aspartate kinase (AK) and dihydrodipicolinate synthase (DHPS). In Escherichia coli, thrA, metLM, and lysC encode aspartokinase isozymes that show feedback inhibition by threonine, methionine, and lysine, respectively []. The lysine-sensitive isoenzyme of aspartate kinase from spinach leaves has a subunit composition of 4 large and 4 small subunits []. In plants although the control of carbon fixation and nitrogen assimilation has been studied in detail, relatively little is known about the regulation of carbon and nitrogen flow into amino acids. The metabolic regulation of expression of an Arabidopsis thaliana aspartate kinase/homoserine dehydrogenase (AK/HSD) gene, which encodes two linked key enzymes in the biosynthetic pathway of aspartate family amino acids has been studied []. The conversion of aspartate into either the storage amino acid asparagine or aspartate family amino acids may be subject to a coordinated, reciprocal metabolic control, and this biochemical branch point is a part of a larger, coordinated regulatory mechanism of nitrogen and carbon storage and utilization.; GO: 0008652 cellular amino acid biosynthetic process; PDB: 2X2W_B 2WXB_B 1B7B_C 2J4L_F 2J4K_E 2J4J_F 2OGX_B 3QUO_A 3D40_A 3D41_A ....
Probab=99.96 E-value=2.4e-28 Score=246.83 Aligned_cols=229 Identities=25% Similarity=0.344 Sum_probs=160.4
Q ss_pred ceEEEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcCCCccc-ccCccc---c-
Q 006484 15 KRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLAD-LQKPQN---E- 89 (643)
Q Consensus 15 ~~iVIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~~~~~~-l~~~~~---~- 89 (643)
|++||||||+++++++ .. +.+++++|+.+.+.|+++|||||||++++..+ ..+ +..+++.+ .+.++. .
T Consensus 1 k~~ViK~GGs~l~~~~----~~-~~~~~~~i~~l~~~g~~vvvV~g~g~~~~~~~-~~~-~~~~~~~~~~r~~~~~~~~~ 73 (242)
T PF00696_consen 1 KTIVIKLGGSSLTDKD----EE-LRELADDIALLSQLGIKVVVVHGGGSFTDELL-EKY-GIEPKFVDGSRVTDIETGLI 73 (242)
T ss_dssp SEEEEEE-HHGHSSHS----HH-HHHHHHHHHHHHHTTSEEEEEESSHHHHHHHH-HHC-THTTSEETHHCHBHHHHHHH
T ss_pred CeEEEEECchhhCCch----HH-HHHHHHHHHHHHhCCCeEEEEECChhhcCchH-Hhc-cCCcccchhhhhhhhhhhHH
Confidence 6899999999999753 23 89999999999999999999999998766544 322 33333321 111110 0
Q ss_pred hhHHHHHHhchHHHHHHHHHHhccCCCCcceeEecccccCcchh--hchHHHHHHHHHhCCCeeEecCCCceeccCCCCC
Q 006484 90 LDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDF--RKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYE 167 (643)
Q Consensus 90 l~~~~~~a~G~~~~~~~~~~~l~~~g~~~~~~~~t~~~~~~~~~--~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~ 167 (643)
........+++..+...+...+...+....+....+.++..... ...+.+.|+.++++|.|||++|+-+..
T Consensus 74 ~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~ipVv~g~~~~~------- 146 (242)
T PF00696_consen 74 ITMAAAAELNRDALLDEIVSAGERLGAHAVGLSLSDGGISAAKRDAREVDKEAIRELLEQGIIPVVSGFAGID------- 146 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCTHHEEEHHHTGGTEEEEEEESSEEHHHHHHHHHHTTSEEEEESEEEEE-------
T ss_pred HHHHHhhccccchhHHHHHHhhhhhhHHHHhhhhhcccchhhhhhhhhhHHHHHHHHHHCCCEEEEeCCcccC-------
Confidence 11112223333223334445566666544433222222211111 134678999999999999998722122
Q ss_pred CCCce---e-ecchhHHHHHHhhcCCCEEEEeccCCccccCCCC-CCCccceeeeecccchhHHhcCCCCCccCCCchHH
Q 006484 168 DSSGI---F-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAK 242 (643)
Q Consensus 168 ~~~~~---~-~~~D~~A~~lA~~L~Ad~li~lTdVdGVy~~~P~-~p~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~K 242 (643)
..|.. + +++|++|+.+|.+|+|++|+|+|||||||+.||+ +|++++|++|+++|+.++... +.+++|||.+|
T Consensus 147 ~~g~~~~~~~~~sD~~A~~lA~~l~A~~li~~tdV~Gv~~~dP~~~~~~~~i~~l~~~e~~~l~~~---~~~~~~gm~~k 223 (242)
T PF00696_consen 147 DDGEVTTLGNVSSDYIAALLAAALGADKLIFLTDVDGVYTADPRIVPDARLIPELSYDEAEELASK---SGDVTGGMKPK 223 (242)
T ss_dssp TTSTEEEEEEETHHHHHHHHHHHTTCSEEEEEESSSSEBSSSTTTSTTSEBESEEEHHHHHHHHHH---TTSSTTTHHHH
T ss_pred CCCCcccCCCCCHHHHHHHHHHHhCchhhhhhhhcCceeecCCCCCCCCeeeeEeeHHHHHHHHhc---CCCCCCCHHHH
Confidence 24444 3 9999999999999999999999999999999996 799999999999999987632 34899999999
Q ss_pred HHHHHHHHHc-CCcEEEEe
Q 006484 243 VNAAYCAACA-GIPVVITS 260 (643)
Q Consensus 243 l~aa~~a~~~-gv~v~I~~ 260 (643)
+.+|..+++. +++|+|+|
T Consensus 224 ~~~a~~~~~~~~~~v~I~n 242 (242)
T PF00696_consen 224 HPAALEAAEEGGIPVHIIN 242 (242)
T ss_dssp HHHHHHHHHHTTSEEEEEE
T ss_pred HHHHHHHHHcCCCcEEEeC
Confidence 9999998887 56799986
No 179
>PRK08841 aspartate kinase; Validated
Probab=99.96 E-value=8.9e-28 Score=256.16 Aligned_cols=230 Identities=22% Similarity=0.285 Sum_probs=178.2
Q ss_pred ceEEEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcCCCcccccCcccchhHHH
Q 006484 15 KRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKA 94 (643)
Q Consensus 15 ~~iVIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~~~~~~l~~~~~~l~~~~ 94 (643)
+++|+||||+++.+. +.++.++++|+.+++.|+++||||||++..+..+++...... .+.. .-..+.
T Consensus 2 ~~~V~KfGGtsv~~~------~~i~~va~~I~~~~~~g~~vvvVvSa~~~~td~ll~~~~~~~----~~~~---~~~~d~ 68 (392)
T PRK08841 2 PLIVQKFGGTSVGSI------ERIQTVAEHIIKAKNDGNQVVVVVSAMAGETNRLLGLAKQVD----SVPT---ARELDV 68 (392)
T ss_pred CeEEEeECcccCCCH------HHHHHHHHHHHHHHHCCCCEEEEECCCchHHHHHHHhhhhhc----cCCC---HHHHHH
Confidence 589999999999874 368999999999999999999999999988887765433221 1110 012357
Q ss_pred HHHhchHHHHHHHHHHhccCCCCcc-----ee-EecccccCcchhhchHHHHHHHHHhCCCeeEecCCCceeccCCCCCC
Q 006484 95 CAAVGQSSLMALYDTLFSQLDVTSS-----QL-LVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYED 168 (643)
Q Consensus 95 ~~a~G~~~~~~~~~~~l~~~g~~~~-----~~-~~t~~~~~~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~ 168 (643)
+.+.|+..++.++...|+..|+++. +. +++++.+.+........+.+..+++.|.|||+.|+-+...
T Consensus 69 l~s~GE~~s~~lla~~L~~~Gi~a~~l~~~~~~i~t~~~~~~~~i~~~~~~~i~~ll~~~~vpVv~Gf~g~~~------- 141 (392)
T PRK08841 69 LLSAGEQVSMALLAMTLNKLGYAARSLTGAQANIVTDNQHNDATIKHIDTSTITELLEQDQIVIVAGFQGRNE------- 141 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCeEEEehhHcCEEecCCCCCceechhhHHHHHHHHhCCCEEEEeCCcccCC-------
Confidence 8899999998889999999998654 32 3444444322222234688999999999999988432211
Q ss_pred CCce----eecchhHHHHHHhhcCCCEEEEeccCCccccCCCC-CCCccceeeeecccchhHHhcCCCCCccCCCchHHH
Q 006484 169 SSGI----FWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKV 243 (643)
Q Consensus 169 ~~~~----~~~~D~~A~~lA~~L~Ad~li~lTdVdGVy~~~P~-~p~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~Kl 243 (643)
.|.. ++++|++|+.+|.+|+||+|+++|||||||+.||+ +|++++|++|+++|+.++.. .|.+..++
T Consensus 142 ~g~~ttlgrggsD~tAa~lA~~L~Ad~l~i~TDVdGVyt~DP~~v~~A~~i~~is~~ea~ela~--------~Ga~vlhp 213 (392)
T PRK08841 142 NGDITTLGRGGSDTTAVALAGALNADECQIFTDVDGVYTCDPRVVKNARKLDVIDFPSMEAMAR--------KGAKVLHL 213 (392)
T ss_pred CCCEEEeCCCChHHHHHHHHHHcCCCEEEEEeCCCCCCcCCCCCCCCceEcccccHHHHHHHHh--------cCccccCH
Confidence 2222 26999999999999999999999999999999996 89999999999999987654 35567788
Q ss_pred HHHHHHHHcCCcEEEEeCCCcchHHHHHcCCceeeEEec
Q 006484 244 NAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHR 282 (643)
Q Consensus 244 ~aa~~a~~~gv~v~I~~g~~~~~l~~~~~g~~~GT~i~~ 282 (643)
+++..+.++|+|++|.|++.+ ..||+|..
T Consensus 214 ~ai~~a~~~~Ipi~i~n~~~~----------~~GT~I~~ 242 (392)
T PRK08841 214 PSVQHAWKHSVPLRVLSSFEV----------GEGTLIKG 242 (392)
T ss_pred HHHHHHHHCCCeEEEEecCCC----------CCCeEEEe
Confidence 999999999999999998764 24888853
No 180
>cd04254 AAK_UMPK-PyrH-Ec UMP kinase (UMPK)-Ec, the microbial/chloroplast uridine monophosphate kinase (uridylate kinase) enzyme that catalyzes UMP phosphorylation and plays a key role in pyrimidine nucleotide biosynthesis; regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway). The UMP kinase of E. coli (Ec) is known to function as a homohexamer, with GTP and UTP being allosteric effectors. Like other related enzymes (carbamate kinase, aspartokinase, and N-acetylglutamate kinase) the E. coli and most bacterial and chloroplast UMPKs (this CD) have a conserved, N-terminal, lysine residue proposed to function in the catalysis of the phosphoryl group transfer, whereas most archaeal UMPKs appear to lack this residue and the Pyrococcus furiosus structure has an additional Mg ion bound to the ATP molecule which is proposed to function as the catalysis instead. Members of this CD be
Probab=99.95 E-value=2.2e-27 Score=237.02 Aligned_cols=229 Identities=18% Similarity=0.270 Sum_probs=166.7
Q ss_pred ceEEEEeCCcccccCCC-ccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcCCCcccccCcccchhHH
Q 006484 15 KRLVVKVGTAVVTRSDG-RLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGK 93 (643)
Q Consensus 15 ~~iVIKlGGs~l~~~~~-~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 93 (643)
|++|||||||++++++. .++.+.+++++++|+++...|+++|||||||..+.......+.. . .. .. .
T Consensus 1 ~~iViKlGGs~itdk~~~~~~~~~i~~~a~~i~~~~~~~~~~viVhGgG~~~~~~~~~~~~~-~----~~--~~-----d 68 (231)
T cd04254 1 KRVLLKLSGEALAGENGFGIDPEVLNRIAREIKEVVDLGVEVAIVVGGGNIFRGASAAEAGM-D----RA--TA-----D 68 (231)
T ss_pred CeEEEEeCceEECCCCCCCCCHHHHHHHHHHHHHHHHCCCcEEEEECCCcccccchhhhcCC-C----ch--hh-----h
Confidence 47999999999998752 46788899999999999888899999999976431111111110 0 00 00 1
Q ss_pred HHHHhchHHHHHHHHHHhccCCCCcceeEecccccCcchhhchHHHHHHHHHhCCCeeEecCCCceeccCCCCCCCCcee
Q 006484 94 ACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIF 173 (643)
Q Consensus 94 ~~~a~G~~~~~~~~~~~l~~~g~~~~~~~~t~~~~~~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~~~~~~ 173 (643)
.+...+......++...|...|+++..+.. ..+.... .....+.+..++++|+|||++|+. |...
T Consensus 69 ~~g~~~~~~n~~ll~~~L~~~Gv~a~~l~~--~~~~~~~-~~~~~~~l~~~l~~g~ipV~~g~~------------G~~~ 133 (231)
T cd04254 69 YMGMLATVINALALQDALESLGVKTRVMSA--IPMQGVA-EPYIRRRAIRHLEKGRVVIFAGGT------------GNPF 133 (231)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCeEEEcH--HHhhhhh-cccCHHHHHHHHHCCCEEEEECCc------------CCCC
Confidence 122233333333566788888987643211 1110000 112357899999999999997622 2224
Q ss_pred ecchhHHHHHHhhcCCCEEEEeccCCccccCCCC-CCCccceeeeecccchhHHhcCCCCCccCCCchHHHHHHHHHHHc
Q 006484 174 WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACA 252 (643)
Q Consensus 174 ~~~D~~A~~lA~~L~Ad~li~lTdVdGVy~~~P~-~p~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~ 252 (643)
+++|++|+.+|.+|+||+|+|+|||||||++||+ +|++++|++|+++|+.+ .+ .. ..++.++..+.+.
T Consensus 134 ~~~D~~a~~lA~~l~a~~l~~~tdVdGvy~~dp~~~~~a~~i~~i~~~~~~~---~~------~~--~~d~~a~~~a~~~ 202 (231)
T cd04254 134 FTTDTAAALRAIEINADVILKATKVDGVYDADPKKNPNAKRYDHLTYDEVLS---KG------LK--VMDATAFTLCRDN 202 (231)
T ss_pred CCcHHHHHHHHHHcCCCEEEEEeCCCEEEecCCCCCCCcEEeeEecHHHHHh---cc------hh--hhHHHHHHHHHHC
Confidence 7899999999999999999999999999999996 89999999999987753 12 12 3478888889999
Q ss_pred CCcEEEEeCCCcchHHHHHcCCceeeEEe
Q 006484 253 GIPVVITSGFAMDSIIKVLEGKRVGTLFH 281 (643)
Q Consensus 253 gv~v~I~~g~~~~~l~~~~~g~~~GT~i~ 281 (643)
|++++|+||+.|++|.+++.|+..||+|.
T Consensus 203 gi~~~I~~g~~~~~l~~~l~g~~~GT~i~ 231 (231)
T cd04254 203 NLPIVVFNINEPGNLLKAVKGEGVGTLIS 231 (231)
T ss_pred CCeEEEEeCCCccHHHHHHCCCCCCEEeC
Confidence 99999999999999999999988999873
No 181
>PRK14557 pyrH uridylate kinase; Provisional
Probab=99.95 E-value=7.8e-27 Score=233.31 Aligned_cols=234 Identities=16% Similarity=0.216 Sum_probs=167.7
Q ss_pred hcccceEEEEeCCcccccCCC-ccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHh-hHHHhhhhhhcCCCcccccCccc
Q 006484 11 VKDVKRLVVKVGTAVVTRSDG-RLALGRLGALLEQLKELNSQGFEIILVSSGAVGV-GRQRLRYRKLVNSSLADLQKPQN 88 (643)
Q Consensus 11 ~~~~~~iVIKlGGs~l~~~~~-~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i-~~~~~~~~~~~~~~~~~l~~~~~ 88 (643)
|.+++++||||||+++.++++ .++.+++++++++|+.+.+.|++++||||||..+ |+. .+. .++ ....
T Consensus 1 ~~~~~riViKlGG~al~~~~~~~~~~~~i~~~a~~i~~~~~~g~~vvVVvGgGn~~rg~~-a~~-~~~-------~~~~- 70 (247)
T PRK14557 1 MRPYKRVLIKLSGGALADQTGNSFNSKRLEHIANEILSIVDLGIEVSIVIGGGNIFRGHL-AEE-WGI-------DRVE- 70 (247)
T ss_pred CCcccEEEEEeCceeECCCCCCCcCHHHHHHHHHHHHHHHHcCCeEEEEECCcHHHHHHH-HHh-cCC-------ChHH-
Confidence 456899999999999987553 5677889999999999999999999999997533 332 111 111 1110
Q ss_pred chhHHHHHHhchHHHHHHHHHHhccC-CCCcceeEecccccCcchhhchHHHHHHHHHhCCCeeEecCCCceeccCCCCC
Q 006484 89 ELDGKACAAVGQSSLMALYDTLFSQL-DVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYE 167 (643)
Q Consensus 89 ~l~~~~~~a~G~~~~~~~~~~~l~~~-g~~~~~~~~t~~~~~~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~ 167 (643)
...+-+.|......++...|... +..+. ++|+..+.... .......+...+++|.|||+.|+.
T Consensus 71 ---~D~ig~~g~~lna~ll~~~l~~~~~~~~~--i~t~~~~~~~~-~~~~~~~~~~~l~~g~VvV~~G~~---------- 134 (247)
T PRK14557 71 ---ADNIGTLGTIINSLMLRGVLTSKTNKEVR--VMTSIPFNAVA-EPYIRLRAVHHLDNGYIVIFGGGN---------- 134 (247)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHhhhCCcee--EEecccccccc-chhhHHHHHHHHhCCCEEEEECCc----------
Confidence 11333444444334555666543 33211 44544443211 111234466779999999997622
Q ss_pred CCCceeecchhHHHHHHhhcCCCEEEEe-ccCCccccCCCC-CCCccceeeeecccchhHHhcCCCCCccCCCchHHHHH
Q 006484 168 DSSGIFWDNDSLAGLLALELKADLLVLL-SDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNA 245 (643)
Q Consensus 168 ~~~~~~~~~D~~A~~lA~~L~Ad~li~l-TdVdGVy~~~P~-~p~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~Kl~a 245 (643)
+...+++|++|+.+|..++||.|+++ |||||||+.||+ +|+|++|++|+++|+.. .+ ..-| ..++
T Consensus 135 --g~~~~stD~lAallA~~l~Ad~li~~ttdVdGvY~~DP~~~~~Ak~i~~i~~~e~~~---~~------~~~~--~~~A 201 (247)
T PRK14557 135 --GQPFVTTDYPSVQRAIEMNSDAILVAKQGVDGVFTSDPKHNKSAKMYRKLNYNDVVR---QN------IQVM--DQAA 201 (247)
T ss_pred --CCCccChHHHHHHHHHHhCCCEEEEecCCcCEeECCCCCCCCCCEEeeEEChhhhcc---cC------HHHH--HHHH
Confidence 22348899999999999999999999 599999999995 99999999999877631 11 1113 3468
Q ss_pred HHHHHHcCCcEEEEeCCCcchHHHHHcCCceeeEEecC
Q 006484 246 AYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 283 (643)
Q Consensus 246 a~~a~~~gv~v~I~~g~~~~~l~~~~~g~~~GT~i~~~ 283 (643)
+..|.++|++++|+||+.|+.|..++.|+..||+|.+.
T Consensus 202 ~~~a~~~gi~v~I~ng~~~~~l~~~l~g~~~GT~i~~~ 239 (247)
T PRK14557 202 LLLARDYNLPAHVFNFDEPGVMRRICLGEHVGTLINDD 239 (247)
T ss_pred HHHHHHCCCcEEEEeCCCChHHHHHHcCCCCcEEEecC
Confidence 88899999999999999999999999999999999876
No 182
>PLN02825 amino-acid N-acetyltransferase
Probab=99.95 E-value=9.6e-27 Score=253.01 Aligned_cols=248 Identities=19% Similarity=0.235 Sum_probs=184.1
Q ss_pred ccceEEEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcCCCccc-ccCcccchh
Q 006484 13 DVKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLAD-LQKPQNELD 91 (643)
Q Consensus 13 ~~~~iVIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~~~~~~-l~~~~~~l~ 91 (643)
++|++|||+||+++.++. +..++.+|+.|+..|.++||||||+||+++.+.. .++++.|.+ ++.+.....
T Consensus 16 rgktfVIk~gG~~l~~~~-------~~~l~~DialL~~lGi~~VlVHGggpqI~~~l~~--~gi~~~f~~G~RVTd~~~L 86 (515)
T PLN02825 16 RGSTFVVVISGEVVAGPH-------LDNILQDISLLHGLGIKFVLVPGTHVQIDKLLAE--RGREPKYVGAYRITDSAAL 86 (515)
T ss_pred CCCEEEEEECchhhcCch-------HHHHHHHHHHHHHCCCCEEEEcCCCHHHHHHHHH--cCCCceeeCCcccCCHHHH
Confidence 578999999999998653 7899999999999999999999999999997643 567777765 554442211
Q ss_pred HHHHHHhchHHHH--HHH-----HHHhccCCCCc----ceeEeccc--------------ccCcchh-hchHHHHHHHHH
Q 006484 92 GKACAAVGQSSLM--ALY-----DTLFSQLDVTS----SQLLVTDS--------------DFRDEDF-RKQLYDTVQSLL 145 (643)
Q Consensus 92 ~~~~~a~G~~~~~--~~~-----~~~l~~~g~~~----~~~~~t~~--------------~~~~~~~-~~~~~~~i~~ll 145 (643)
...+.+.|+.... +.+ ...|.++|.++ ..+...++ |+...|. +.++.+.|+.+|
T Consensus 87 ~~~~~~~G~v~~~i~a~Ls~~~~v~~l~~~G~~a~~~~~gl~~~~Gn~v~a~~~gv~dgvD~g~vG~V~~Vd~~~i~~~L 166 (515)
T PLN02825 87 QASMEAAGKIRVMIEAKLSPGPSIPNLRRHGDNSRWHEVGVSVASGNFLAAKRRGVVNGVDFGATGEVKKIDVSRIKERL 166 (515)
T ss_pred HHHHHHHHHHHHHHHHhhccccchhHHHhcCCCCccccCceEeccCcEEEEEECCCCcCccccceeeEEEEcHHHHHHHH
Confidence 2245566666543 111 12345566554 33322222 3332333 236799999999
Q ss_pred hCCCeeEecCCCceeccCCCCCCCCcee-ecchhHHHHHHhhcCCCEEEEeccCCccccCCCCCCCccceeeeecccchh
Q 006484 146 DLRVIPIFNENDAVSTRKAPYEDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQA 224 (643)
Q Consensus 146 ~~g~iPVv~g~d~v~~~~~~~~~~~~~~-~~~D~~A~~lA~~L~Ad~li~lTdVdGVy~~~P~~p~a~~i~~i~~~e~~~ 224 (643)
++|.|||++ | ++++.+|..| +|+|.+|+.+|.+|+||+|||+||++ ++++ ++++|++|+.+|+++
T Consensus 167 ~~g~Ipvis------p--lg~s~~Ge~~NinaD~vA~avA~aL~A~KLI~ltd~~-~~~~-----~g~li~~l~~~e~~~ 232 (515)
T PLN02825 167 DSNCIVLLS------N--LGYSSSGEVLNCNTYEVATACALAIGADKLICIVDGP-ILDE-----NGRLIRFMTLEEADM 232 (515)
T ss_pred hCCCeEEEC------C--ceECCCCCEEeeCHHHHHHHHHHHcCCCeEEEEeCcc-eecC-----CCCCcCcCCHHHHHH
Confidence 999999995 5 3566677788 99999999999999999999999977 4543 267999999999988
Q ss_pred HHhcCCCC----------------------C-------------------------------c-----------------
Q 006484 225 EITFGDKS----------------------R-------------------------------V----------------- 234 (643)
Q Consensus 225 ~~~~g~~~----------------------~-------------------------------~----------------- 234 (643)
++..++.. . .
T Consensus 233 li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (515)
T PLN02825 233 LIRKRAKQSEIAANYVKAVGGEDYSYSLGLDSVNTTPFNNNGRGFWGSGSATDSFQNGVGFDNGNGLSGEQGFAIGGEER 312 (515)
T ss_pred HHHhhhhcchhhhhhhhhccccccccccccccccccccccccccccccccccccccccccccCcccccccccccccchhh
Confidence 77542000 0 0
Q ss_pred --cCCCchHHHHHHHHHHHcCCc-EEEEeCCCcchH-HHHHcCCceeeEEecC
Q 006484 235 --GRGGMTAKVNAAYCAACAGIP-VVITSGFAMDSI-IKVLEGKRVGTLFHRD 283 (643)
Q Consensus 235 --~~ggM~~Kl~aa~~a~~~gv~-v~I~~g~~~~~l-~~~~~g~~~GT~i~~~ 283 (643)
.+.+...|+.+|..|++.||+ +|+++++.++.| .++|+.+++||.+..+
T Consensus 313 ~~~~~~~~~~l~~a~~a~~~gv~r~hl~~~~~~gall~elft~dg~gt~i~~~ 365 (515)
T PLN02825 313 LSRLNGYLSELAAAAFVCRGGVQRVHLLDGTIEGVLLLELFTRDGMGTMIASD 365 (515)
T ss_pred chhhhhHHHHHHHHHHHHHcCCCeEEeccCCCCchHHHHhhccCCceeEeccC
Confidence 112234569999999999999 999999999998 9999999999999876
No 183
>PRK09411 carbamate kinase; Reviewed
Probab=99.95 E-value=5.6e-27 Score=235.16 Aligned_cols=242 Identities=21% Similarity=0.270 Sum_probs=170.7
Q ss_pred ceEEEEeCCcccccCCCc----cCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcCCCcccccCcccch
Q 006484 15 KRLVVKVGTAVVTRSDGR----LALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNEL 90 (643)
Q Consensus 15 ~~iVIKlGGs~l~~~~~~----~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~~~~~~l~~~~~~l 90 (643)
+++||.|||++|..++.. ...++++..++.|+.|.+. |++||+||+|||+|..+++..... +. ..++|
T Consensus 2 ~~iVvAlGGNAl~~~g~~~~~~~q~~~v~~~a~~ia~l~~~-~~~vitHGNGPQVG~l~~~~~~~~-----~~--~~~pl 73 (297)
T PRK09411 2 KTLVVALGGNALLQRGEALTAENQYRNIASAVPALARLARS-YRLAIVHGNGPQVGLLALQNLAWK-----EV--EPYPL 73 (297)
T ss_pred CeEEEEcCchhhcCCCCCcCHHHHHHHHHHHHHHHHHHHHc-CCEEEEeCCccHHHHHHHHHHhhc-----CC--CCCCc
Confidence 689999999999875432 2345889999999999988 999999999999998776533211 11 22334
Q ss_pred hHHHHHHhchHHHHHHHHHHhccCCCCc------ceeEecccc--cC-----------------------------cchh
Q 006484 91 DGKACAAVGQSSLMALYDTLFSQLDVTS------SQLLVTDSD--FR-----------------------------DEDF 133 (643)
Q Consensus 91 ~~~~~~a~G~~~~~~~~~~~l~~~g~~~------~~~~~t~~~--~~-----------------------------~~~~ 133 (643)
.-....+.|..+. .+++.|.+.++.. .|+.+...| |. ++++
T Consensus 74 d~~~a~sqG~iGy--~l~q~l~~~~~~~~v~t~~Tq~~Vd~~DpaF~~PtKpiG~~y~~e~a~~l~~e~g~~~~~dg~g~ 151 (297)
T PRK09411 74 DVLVAESQGMIGY--MLAQSLSAQPQMPPVTTVLTRIEVSPDDPAFLQPEKFIGPVYQPEEQEALEAAYGWQMKRDGKYL 151 (297)
T ss_pred hhhhhhcccHHHH--HHHHHHHHcCCCCCeEEEEEEEEECCCCccccCCCCccCCccCHHHHHHHHHhcCCEEEecCCce
Confidence 3334445555544 3455565554321 122221111 11 0111
Q ss_pred hc----------hHHHHHHHHHhCCCeeEecCCCceeccCCCCCCCCce-eecchhHHHHHHhhcCCCEEEEeccCCccc
Q 006484 134 RK----------QLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI-FWDNDSLAGLLALELKADLLVLLSDVEGLY 202 (643)
Q Consensus 134 ~~----------~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~~~~~-~~~~D~~A~~lA~~L~Ad~li~lTdVdGVy 202 (643)
++ ++.+.|+.|+++|+|||..|..++... . .+.+.. ++|+|.+|+.||.+|+||+|+|+|||||||
T Consensus 152 rrVVpSP~P~~iVe~~~I~~Ll~~G~IVI~~gGGGIPV~-~--~~~G~e~vIDkD~~Aa~LA~~L~Ad~LIiLTDVdGV~ 228 (297)
T PRK09411 152 RRVVASPQPRKILDSEAIELLLKEGHVVICSGGGGVPVT-E--DGAGSEAVIDKDLAAALLAEQINADGLVILTDADAVY 228 (297)
T ss_pred EEEccCCCCcceECHHHHHHHHHCCCEEEecCCCCCCeE-E--cCCCeEEecCHHHHHHHHHHHhCCCEEEEEeCchhhc
Confidence 11 458999999999999888764333321 1 112333 499999999999999999999999999999
Q ss_pred cCCCCCCCccceeeeecccchhHHhcCCCCCccCCCchHHHHHHHHHHHcC-CcEEEEeCCCcchHHHHHcCCceeeEEe
Q 006484 203 SGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAG-IPVVITSGFAMDSIIKVLEGKRVGTLFH 281 (643)
Q Consensus 203 ~~~P~~p~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~g-v~v~I~~g~~~~~l~~~~~g~~~GT~i~ 281 (643)
+++ .+|++++|++++.+|+.+++ ..+|||.||+++|..+++.| .+++|.+ ++.+.+.+.|+ .||.|.
T Consensus 229 ~n~-~~p~~~~I~~it~~e~~~~~-------~~~GgM~pKVeAA~~~v~~~g~~a~I~~---l~~~~~~l~G~-~GT~I~ 296 (297)
T PRK09411 229 ENW-GTPQQRAIRHATPDELAPFA-------KADGAMGPKVTAVSGYVRSRGKPAWIGA---LSRIEETLAGE-AGTCIS 296 (297)
T ss_pred cCC-CCCCCcCCCCcCHHHHHHhc-------cCCCCcHHHHHHHHHHHHhCCCeEEECC---hhHHHHHHCCC-CCeEEe
Confidence 875 47889999999999987643 24899999999999988865 5598875 67778888887 699874
No 184
>PRK14556 pyrH uridylate kinase; Provisional
Probab=99.95 E-value=2.2e-26 Score=227.07 Aligned_cols=236 Identities=17% Similarity=0.218 Sum_probs=171.0
Q ss_pred HhhhcccceEEEEeCCcccccCCC-ccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcCCCcccccCc
Q 006484 8 RAFVKDVKRLVVKVGTAVVTRSDG-RLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKP 86 (643)
Q Consensus 8 ~~~~~~~~~iVIKlGGs~l~~~~~-~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~~~~~~l~~~ 86 (643)
+.+|.++|++|+|+||++|..+++ .++.+.+..++++|+.+++.|+++.||.|||.- .+...... + . .+...
T Consensus 9 ~~~~~~~~rvllKlsGe~l~~~~~~~~d~~~~~~~a~~i~~~~~~g~~i~iVvGGGni-~Rg~~~~~-~--~---~~~r~ 81 (249)
T PRK14556 9 SQKLPKLKRILLKLSGESLSADQGFGINVESAQPIINQIKTLTNFGVELALVVGGGNI-LRGGRANF-G--N---KIRRA 81 (249)
T ss_pred chhhhhhCEEEEEEehhhCcCCCCCCcCHHHHHHHHHHHHHHHhCCcEEEEEECCCHH-HhCchhhc-c--C---CCchh
Confidence 445777899999999999986543 588899999999999999999999999999884 33211110 0 0 11111
Q ss_pred ccchhHHHHHHhchHHHHHHHHHHhccCCCCcceeEec--ccccCcchhhchHHHHHHHHHhCCCeeEecCCCceeccCC
Q 006484 87 QNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVT--DSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKA 164 (643)
Q Consensus 87 ~~~l~~~~~~a~G~~~~~~~~~~~l~~~g~~~~~~~~t--~~~~~~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~ 164 (643)
. .+..++.+.-.+.+ ++...|...|+++. ++-. ...+ ...+ ..+.+.+.+++|.|+|+.|+
T Consensus 82 ~--~D~~GmlaT~iNal--~l~~~l~~~~~~~~-v~sa~~~~~~--~e~~--~~~~~~~~l~~g~vvi~~gg-------- 144 (249)
T PRK14556 82 T--ADSMGMIATMINAL--ALRDMLISEGVDAE-VFSAKGVDGL--LKVA--SAHEFNQELAKGRVLIFAGG-------- 144 (249)
T ss_pred h--hhHHHHHHHHHHHH--HHHHHHHHcCCCeE-EeeccccCcC--CCCC--CHHHHHHHHhCCCEEEEECC--------
Confidence 1 11112222222221 45578888887643 2211 1112 1222 34667789999999998651
Q ss_pred CCCCCCceeecchhHHHHHHhhcCCCEEEEeccCCccccCCCC-CCCccceeeeecccchhHHhcCCCCCccCCCchHHH
Q 006484 165 PYEDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKV 243 (643)
Q Consensus 165 ~~~~~~~~~~~~D~~A~~lA~~L~Ad~li~lTdVdGVy~~~P~-~p~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~Kl 243 (643)
.|..++++|++|+.+|..++||.|+++|||||||+.||+ +|+++++++|+++|.... + .. ..+.
T Consensus 145 ----~G~p~~StD~lAallA~~l~Ad~Lii~TdVDGVYd~DP~~~p~A~~i~~I~~~e~~~~---~------l~--vmd~ 209 (249)
T PRK14556 145 ----TGNPFVTTDTTASLRAVEIGADALLKATTVNGVYDKDPNKYSDAKRFDKVTFSEVVSK---E------LN--VMDL 209 (249)
T ss_pred ----CCCCcCCcHHHHHHHHHHcCCCEEEEEeCCCccCCCCCCCCCCceEeeEEchhhhccc---c------hH--hHHH
Confidence 234568999999999999999999999999999999995 999999999998876531 1 11 2346
Q ss_pred HHHHHHHHcCCcEEEEeCCCcchHHHHHcCCceeeEEec
Q 006484 244 NAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHR 282 (643)
Q Consensus 244 ~aa~~a~~~gv~v~I~~g~~~~~l~~~~~g~~~GT~i~~ 282 (643)
.++..+.++|++++|+|++.|+.|.+++.|+..||++.-
T Consensus 210 ~A~~~a~~~gIpi~I~ng~~~~~L~~~l~Ge~~GT~i~~ 248 (249)
T PRK14556 210 GAFTQCRDFGIPIYVFDLTQPNALVDAVLDSKYGTWVTL 248 (249)
T ss_pred HHHHHHHHCCCcEEEECCCCchHHHHHHcCCCCceEEEe
Confidence 788889999999999999999999999999999999853
No 185
>COG0549 ArcC Carbamate kinase [Amino acid transport and metabolism]
Probab=99.95 E-value=3.3e-26 Score=222.42 Aligned_cols=255 Identities=23% Similarity=0.316 Sum_probs=188.0
Q ss_pred ceEEEEeCCcccccCCCc----cCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcCCCcccccCcccch
Q 006484 15 KRLVVKVGTAVVTRSDGR----LALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNEL 90 (643)
Q Consensus 15 ~~iVIKlGGs~l~~~~~~----~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~~~~~~l~~~~~~l 90 (643)
+++||.|||++|..++.. .+.++++..+++|+.|.+.|+++||.||+|||+|..+++.....+ .. ....++|
T Consensus 1 ~~iVvALGGNAll~~g~~~tae~Q~~~v~~ta~~i~~l~~~g~e~VitHGNGPQVG~l~lq~~aa~~--~~--~~p~~PL 76 (312)
T COG0549 1 KRIVVALGGNALLQRGEPLTAEAQYEAVKITAEQIADLIASGYEVVITHGNGPQVGLLLLQNEAADS--EK--GVPAYPL 76 (312)
T ss_pred CeEEEEecchhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHhhhhcc--cc--CCCCccH
Confidence 479999999999876432 346889999999999999999999999999999998765332111 01 1222344
Q ss_pred hHHHHHHhchHHHH--HHHHHHhccCCCC--c----ceeEecccc--cC------------------------------c
Q 006484 91 DGKACAAVGQSSLM--ALYDTLFSQLDVT--S----SQLLVTDSD--FR------------------------------D 130 (643)
Q Consensus 91 ~~~~~~a~G~~~~~--~~~~~~l~~~g~~--~----~~~~~t~~~--~~------------------------------~ 130 (643)
...+..+-|+.+.+ ..+.+.|...++. . .|+.+..+| |. +
T Consensus 77 d~~~AmsQG~IGy~l~qal~n~l~~~~~~~~v~tvvTqv~VD~nDPAF~nPtKpIGpfY~~eea~~l~~~~gw~~keD~~ 156 (312)
T COG0549 77 DVLVAMSQGMIGYMLQQALRNELPRRGLEKPVVTVVTQVEVDANDPAFLNPTKPIGPFYSEEEAEELAKEYGWVFKEDAG 156 (312)
T ss_pred HHHhHhhhhHHHHHHHHHHHHHHhhcCCCCceeEEEEEEEEcCCCccccCCCCCCCCCcCHHHHHHHHhhcCcEEEecCC
Confidence 44455566665543 4566677666653 1 222222221 11 1
Q ss_pred chhhc----------hHHHHHHHHHhCCCeeEecCCCceeccCCCCCCCCc-eeecchhHHHHHHhhcCCCEEEEeccCC
Q 006484 131 EDFRK----------QLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSG-IFWDNDSLAGLLALELKADLLVLLSDVE 199 (643)
Q Consensus 131 ~~~~~----------~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~~~~-~~~~~D~~A~~lA~~L~Ad~li~lTdVd 199 (643)
+|+++ ...+.|+.|+++|.++|..|+.++..+.-+..-.|. .++|.|..++.||..++||.|+||||||
T Consensus 157 rG~RRVVpSP~P~~IvE~~~Ik~L~~~g~vVI~~GGGGIPVv~~~~~~~GVeAVIDKDlasalLA~~i~AD~liILTdVd 236 (312)
T COG0549 157 RGYRRVVPSPKPVRIVEAEAIKALLESGHVVIAAGGGGIPVVEEGAGLQGVEAVIDKDLASALLAEQIDADLLIILTDVD 236 (312)
T ss_pred CCeeEecCCCCCccchhHHHHHHHHhCCCEEEEeCCCCcceEecCCCcceeeEEEccHHHHHHHHHHhcCCEEEEEeccc
Confidence 22222 357899999999999999987777664321110111 2599999999999999999999999999
Q ss_pred ccccCCCCCCCccceeeeecccchhHHhcCCCCCccCCCchHHHHHHHHHHHcCC-cEEEEeCCCcchHHHHHcCCceee
Q 006484 200 GLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGI-PVVITSGFAMDSIIKVLEGKRVGT 278 (643)
Q Consensus 200 GVy~~~P~~p~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gv-~v~I~~g~~~~~l~~~~~g~~~GT 278 (643)
+||.+.. .|+.+.|++++.+|+++++..+ ++..|.|.||++||..+++++= +++|.+ .+.+.+.+.|+ .||
T Consensus 237 ~Vy~n~g-kp~q~~L~~v~~~e~~~yl~eg---~Fa~GSM~PKVeAai~Fv~~~gk~A~Its---Le~~~~~l~g~-~GT 308 (312)
T COG0549 237 AVYVNFG-KPNQQALDRVTVDEMEKYLAEG---QFAAGSMGPKVEAAISFVENTGKPAIITS---LENAEAALEGK-AGT 308 (312)
T ss_pred hheecCC-CccchhhcccCHHHHHHHHhcC---CCCCCCccHHHHHHHHHHHcCCCceEECc---HHHHHHHhccC-CCc
Confidence 9999876 6788999999999999998875 5899999999999999998754 499987 78888888886 699
Q ss_pred EEe
Q 006484 279 LFH 281 (643)
Q Consensus 279 ~i~ 281 (643)
.|.
T Consensus 309 ~I~ 311 (312)
T COG0549 309 VIV 311 (312)
T ss_pred Eec
Confidence 875
No 186
>TIGR00656 asp_kin_monofn aspartate kinase, monofunctional class. The Lys-sensitive enzyme of Bacillus subtilis resembles the E. coli form but is an alpha 2/beta 2 heterotetramer, where the beta subunit is translated from an in-phase alternative initiator at Met-246. The protein slr0657 from Synechocystis PCC6803 is extended by a duplication of the C-terminal region corresponding to the beta chain. Incorporation of a second copy of the C-terminal domain may be quite common in this subgroup of aspartokinases.
Probab=99.95 E-value=4.9e-27 Score=254.43 Aligned_cols=230 Identities=21% Similarity=0.300 Sum_probs=178.5
Q ss_pred eEEEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhh-hcCCCcccccCcccchhHHH
Q 006484 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRK-LVNSSLADLQKPQNELDGKA 94 (643)
Q Consensus 16 ~iVIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~-~~~~~~~~l~~~~~~l~~~~ 94 (643)
++|+||||+++.+.+ .+++++++|+.+++.|+++||||||++.++..+.+... +...+ .. ....+.
T Consensus 2 ~iViK~GGs~~~~~~------~i~~~~~~i~~~~~~g~~~vvV~sg~~~~t~~l~~~~~~~~~~~---~~----~~~~~~ 68 (401)
T TIGR00656 2 LIVQKFGGTSVGSGE------RIKNAARIVLKEKKEGHKVVVVVSAMSGVTDALVEISEKAIRDA---IT----PRERDE 68 (401)
T ss_pred cEEEEECCcCcCCHH------HHHHHHHHHHHHHHcCCCEEEEEeCCCCChHHHHHHHHHHhccC---CC----hHHHHH
Confidence 589999999998743 68999999999999999999999999999998765442 11101 00 011346
Q ss_pred HHHhchHHHHHHHHHHhccCCCCccee------EecccccCcchhhchHH-HHHHHHHhCCCeeEecCCCceeccCCCCC
Q 006484 95 CAAVGQSSLMALYDTLFSQLDVTSSQL------LVTDSDFRDEDFRKQLY-DTVQSLLDLRVIPIFNENDAVSTRKAPYE 167 (643)
Q Consensus 95 ~~a~G~~~~~~~~~~~l~~~g~~~~~~------~~t~~~~~~~~~~~~~~-~~i~~ll~~g~iPVv~g~d~v~~~~~~~~ 167 (643)
+.+.|+..+..++...|...|+++.++ +++...+.+........ +.++.+++.|.|||++|+-+...
T Consensus 69 i~~~Ge~~s~~~~~~~l~~~g~~a~~l~~~~~~~~t~~~~~~~~~~~~~~~~~l~~~l~~~~vpVi~g~~~~~~------ 142 (401)
T TIGR00656 69 LVSHGERLSSALFSGALRDLGVKAIWLDGGEAGIITDDNFGNAKIDIIATEERLLPLLEEGIIVVVAGFQGATE------ 142 (401)
T ss_pred HhhHHHHHHHHHHHHHHHhCCCceEEeccccceEEeCCCCCceEeeecchHHHHHHHHhCCCEEEecCcceeCC------
Confidence 778899877778899999999988766 33444443322222334 88999999999999987322211
Q ss_pred CCCce----eecchhHHHHHHhhcCCCEEEEeccCCccccCCCC-CCCccceeeeecccchhHHhcCCCCCccCCCchHH
Q 006484 168 DSSGI----FWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAK 242 (643)
Q Consensus 168 ~~~~~----~~~~D~~A~~lA~~L~Ad~li~lTdVdGVy~~~P~-~p~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~K 242 (643)
+|.. ++++|++|+.+|.+|+|++|+|+|||||||+.||+ +|++++|++|+++|+.++...| ....+
T Consensus 143 -~g~~~~lgrg~sD~~A~~lA~~l~A~~l~i~tdV~Gv~~~DP~~~~~a~~i~~ls~~ea~~l~~~G--------~~v~~ 213 (401)
T TIGR00656 143 -KGYTTTLGRGGSDYTAALLAAALKADRVDIYTDVPGVYTTDPRVVEAAKRIDKISYEEALELATFG--------AKVLH 213 (401)
T ss_pred -CCCEeecCCCcHHHHHHHHHHHcCCCEEEEEECCCCCCcCCCCCCCCcEECCccCHHHHHHHHHcC--------CcccC
Confidence 2222 26899999999999999999999999999999996 8999999999999999877643 33667
Q ss_pred HHHHHHHHHcCCcEEEEeCCCcchHHHHHcCCceeeEEecC
Q 006484 243 VNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 283 (643)
Q Consensus 243 l~aa~~a~~~gv~v~I~~g~~~~~l~~~~~g~~~GT~i~~~ 283 (643)
++++..+.++++|++|.|++.|+ .||+|...
T Consensus 214 ~~a~~~a~~~~i~i~i~~~~~~~----------~gT~I~~~ 244 (401)
T TIGR00656 214 PRTVEPAMRSGVPIEVRSSFDPE----------EGTLITNS 244 (401)
T ss_pred HHHHHHHHHCCCeEEEEECCCCC----------CCeEEEeC
Confidence 88999999999999999998873 38888654
No 187
>PRK04531 acetylglutamate kinase; Provisional
Probab=99.95 E-value=2e-26 Score=244.77 Aligned_cols=211 Identities=22% Similarity=0.191 Sum_probs=159.5
Q ss_pred cceEEEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcCCCccc-ccCcccchhH
Q 006484 14 VKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLAD-LQKPQNELDG 92 (643)
Q Consensus 14 ~~~iVIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~~~~~~-l~~~~~~l~~ 92 (643)
++++|||+||+++.+. ++.++++|+.|++.|.++|||||||++++..+.. .++++.|.+ ++.+......
T Consensus 36 ~~~~VIKiGG~~l~~~--------~~~l~~dla~L~~~G~~~VlVHGggpqI~~~l~~--~gie~~~v~G~RVTd~~tl~ 105 (398)
T PRK04531 36 ERFAVIKVGGAVLRDD--------LEALASSLSFLQEVGLTPIVVHGAGPQLDAELDA--AGIEKETVNGLRVTSPEALA 105 (398)
T ss_pred CcEEEEEEChHHhhcC--------HHHHHHHHHHHHHCCCcEEEEECCCHHHHHHHHH--cCCCcEEECCEecCCHHHHH
Confidence 5899999999999852 5899999999999999999999999999987643 466666554 3333211000
Q ss_pred HHHHHhchHHHHHHHHHHhccCCCCcceeEecccccCcchhhchHHHHHHHHHhCCCeeEecCCCceeccCCCCCCCCce
Q 006484 93 KACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI 172 (643)
Q Consensus 93 ~~~~a~G~~~~~~~~~~~l~~~g~~~~~~~~t~~~~~~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~~~~~ 172 (643)
.+..++++... .....|+.+|+.|+|||+++ . +.+..|..
T Consensus 106 vv~~~l~~vn~--------------------------------~lv~~I~~~L~~g~IPVlsp------l--g~~~~G~~ 145 (398)
T PRK04531 106 IVRKVFQRSNL--------------------------------DLVEAVESSLRAGSIPVIAS------L--GETPSGQI 145 (398)
T ss_pred HHHHHHHHHHH--------------------------------HHHHHHHHHHHCCCEEEEeC------c--EECCCCcE
Confidence 01111111000 01123899999999999953 2 22234556
Q ss_pred e-ecchhHHHHHHhhcCCCEEEEeccCCccccCCCCCCCccceeeeec-ccchhHHhcCCCCCccCCCchHHHHHHHHHH
Q 006484 173 F-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIR-AKHQAEITFGDKSRVGRGGMTAKVNAAYCAA 250 (643)
Q Consensus 173 ~-~~~D~~A~~lA~~L~Ad~li~lTdVdGVy~~~P~~p~a~~i~~i~~-~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~ 250 (643)
+ +|+|.+|+.+|.+|+|++|+|+|||+|||+.+ +++|++|+. ++...++.. .+++|||.+|+++|..++
T Consensus 146 ~NvnaD~vA~~LA~aL~a~KLIfltdv~GV~d~~-----g~~i~~i~~~~e~~~l~~~----~~vtgGM~~KL~~a~~al 216 (398)
T PRK04531 146 LNINADVAANELVSALQPYKIIFLTGTGGLLDAD-----GKLISSINLSTEYDHLMQQ----PWINGGMKLKLEQIKELL 216 (398)
T ss_pred EEECHHHHHHHHHHHcCCCEEEEEECCCCccCCC-----CCCcccCCHHHHHHHHHhc----CCCCccHHHHHHHHHHHH
Confidence 6 99999999999999999999999999999753 689999997 566666543 378999999999999999
Q ss_pred HcCCcEEEEeCCCcchH-HHHHcCCceeeEEecC
Q 006484 251 CAGIPVVITSGFAMDSI-IKVLEGKRVGTLFHRD 283 (643)
Q Consensus 251 ~~gv~v~I~~g~~~~~l-~~~~~g~~~GT~i~~~ 283 (643)
+..-+++++++..|+.| .++++.+..||.+...
T Consensus 217 ~~~~~~~~V~i~~~~~Ll~eLft~~G~GT~I~~g 250 (398)
T PRK04531 217 DRLPLESSVSITSPSDLAKELFTHKGSGTLVRRG 250 (398)
T ss_pred hCCCcEEEEEecCCCHHHHHHccCCCCCeEEecC
Confidence 75334888888889998 6788888899999987
No 188
>TIGR02076 pyrH_arch uridylate kinase, putative. This family consists of the archaeal and spirochete proteins most closely related to bacterial uridylate kinases (TIGR02075), an enzyme involved in pyrimidine biosynthesis. Members are likely, but not known, to be functionally equivalent to their bacterial counterparts. However, substantial sequence differences suggest that regulatory mechanisms may be different; the bacterial form is allosterically regulated by GTP.
Probab=99.95 E-value=2.6e-26 Score=228.19 Aligned_cols=219 Identities=20% Similarity=0.256 Sum_probs=159.0
Q ss_pred EEEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcCCCcccccCcccchhHHHHH
Q 006484 17 LVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACA 96 (643)
Q Consensus 17 iVIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~ 96 (643)
+|||||||++++++ +.+.+.+++++|++++.. ++++||||||.. .+.+.+...... +.. ..+...++
T Consensus 1 iViKlGGs~l~~~~---~~~~i~~i~~~i~~~~~~-~~viiV~ggG~~-a~~~~~~~~~~~-----~~~--~~~~~~g~- 67 (221)
T TIGR02076 1 IVISLGGSVLSPEI---DAEFIKEFANILRKLSDE-HKVGVVVGGGKT-ARRYIGVARELG-----ASE--TFLDEIGI- 67 (221)
T ss_pred CEEEechhhcCCCC---CHHHHHHHHHHHHHHHhC-CeEEEEECCcHH-HHHHHHHHHHcC-----CCH--HHHHHhhh-
Confidence 58999999999763 567899999999999876 899999988774 454433332211 000 00011111
Q ss_pred HhchHHHHHHHHHHhccCCCCcceeEecccccCcchhhchHHHHHHHHHhCCCeeEecCCCceeccCCCCCCCCceeecc
Q 006484 97 AVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDN 176 (643)
Q Consensus 97 a~G~~~~~~~~~~~l~~~g~~~~~~~~t~~~~~~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~~~~~~~~~ 176 (643)
.+......+++.+|...+++.... +......+++.|.+||++|+. + .+++
T Consensus 68 -~~~~ln~~~l~~ll~~~~~~~~~~---------------~~~~~~~~l~~g~ipv~~G~~---~-----------~~s~ 117 (221)
T TIGR02076 68 -DATRLNAMLLIAALGDDAYPKVPE---------------NFEEALEAMSLGKIVVMGGTH---P-----------GHTT 117 (221)
T ss_pred -HHHHHHHHHHHHHHHhcCCCCcCC---------------CHHHHHHHHHcCCEEEEcCCC---C-----------CCCc
Confidence 112122223445565445443211 012346788899999998721 1 1688
Q ss_pred hhHHHHHHhhcCCCEEEEeccCCccccCCCC-CCCccceeeeecccchhHHhcCCCCCccCC-CchHHHHHHHHHHHcCC
Q 006484 177 DSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRG-GMTAKVNAAYCAACAGI 254 (643)
Q Consensus 177 D~~A~~lA~~L~Ad~li~lTdVdGVy~~~P~-~p~a~~i~~i~~~e~~~~~~~g~~~~~~~g-gM~~Kl~aa~~a~~~gv 254 (643)
|++|+.+|.+|+||+|+|+|||||||++||+ +|++++|++|+++|+.++... ...++| +|..|+.++..+.+.|+
T Consensus 118 D~~A~~lA~~l~A~~li~ltdVdGvy~~dP~~~~~a~~i~~i~~~e~~~~~~~---~~~~~g~~~~~~~~a~~~~~~~~i 194 (221)
T TIGR02076 118 DAVAALLAEFSKADLLINATNVDGVYDKDPKKDPDAKKFDKLTPEELVEIVGS---SSVKAGSNEVVDPLAAKIIERSKI 194 (221)
T ss_pred HHHHHHHHHHcCCCEEEEEeCCCcccCCCCCCCCCCeEeeEECHHHHHHHhcC---CCccCCCCceeHHHHHHHHHHCCC
Confidence 9999999999999999999999999999995 899999999999888765432 235567 67789999999999999
Q ss_pred cEEEEeCCCcchHHHHHcCCceeeEEe
Q 006484 255 PVVITSGFAMDSIIKVLEGKRVGTLFH 281 (643)
Q Consensus 255 ~v~I~~g~~~~~l~~~~~g~~~GT~i~ 281 (643)
+++|+||+.|+.+...+.|+..||.|.
T Consensus 195 ~v~I~~g~~~~~l~~~l~g~~~GT~i~ 221 (221)
T TIGR02076 195 RTIVVNGRDPENLEKVLKGEHVGTIIE 221 (221)
T ss_pred cEEEECCCCccHHHHHHCCCCCCeEeC
Confidence 999999999999988888888899873
No 189
>PRK08210 aspartate kinase I; Reviewed
Probab=99.95 E-value=1.3e-26 Score=250.78 Aligned_cols=232 Identities=19% Similarity=0.288 Sum_probs=174.5
Q ss_pred cceEEEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhh-----HHHhhhhhhcCCCcccccCccc
Q 006484 14 VKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVG-----RQRLRYRKLVNSSLADLQKPQN 88 (643)
Q Consensus 14 ~~~iVIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~-----~~~~~~~~~~~~~~~~l~~~~~ 88 (643)
|+++|||||||++++++ .+.+++++|+.+.+.|+++||||||+++.| +.+++...... + .....
T Consensus 1 m~~iViK~GGs~l~~~~------~~~~~~~~i~~~~~~g~~~vvV~sa~g~~G~~~~t~~l~~~~~~~~--~-~~~~~-- 69 (403)
T PRK08210 1 MKIIVQKFGGTSVSTEE------RRKMAVNKIKKALKEGYKVVVVVSAMGRKGDPYATDTLLSLVGEEF--S-EISKR-- 69 (403)
T ss_pred CCeEEEeECCcccCCHH------HHHHHHHHHHHHHHcCCCEEEEEeCCCCCCCCCccHHHHHHHHHhc--c-CCChH--
Confidence 36899999999999764 468999999999999999999996655544 44433221111 0 01110
Q ss_pred chhHHHHHHhchHHHHHHHHHHhccCCCCccee------EecccccCcchhhchHHHHHHHHHhCCCeeEecCCCceecc
Q 006484 89 ELDGKACAAVGQSSLMALYDTLFSQLDVTSSQL------LVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTR 162 (643)
Q Consensus 89 ~l~~~~~~a~G~~~~~~~~~~~l~~~g~~~~~~------~~t~~~~~~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~ 162 (643)
..+.+.++|+.....++...|...|+++.++ +++.+++.+......+.+.+..+++.|.|||++|+-+..
T Consensus 70 --~~~~l~~~Ge~~s~~~~~~~l~~~Gi~a~~l~~~~~~~~t~~~~~~~~v~~~~~~~l~~~l~~~~vpVi~G~~~~~-- 145 (403)
T PRK08210 70 --EQDLLMSCGEIISSVVFSNMLNENGIKAVALTGGQAGIITDDNFTNAKIIEVNPDRILEALEEGDVVVVAGFQGVT-- 145 (403)
T ss_pred --HHHHHHhHhHHHHHHHHHHHHHhCCCCeEEechHHccEEccCCCCceeeehhhHHHHHHHHhcCCEEEeeCeeecC--
Confidence 1235788999888878889999999987665 455554543222334578999999999999998832211
Q ss_pred CCCCCCCCce--e--ecchhHHHHHHhhcCCCEEEEeccCCccccCCCC-CCCccceeeeecccchhHHhcCCCCCccCC
Q 006484 163 KAPYEDSSGI--F--WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRG 237 (643)
Q Consensus 163 ~~~~~~~~~~--~--~~~D~~A~~lA~~L~Ad~li~lTdVdGVy~~~P~-~p~a~~i~~i~~~e~~~~~~~g~~~~~~~g 237 (643)
..|.. + +++|++|+.+|.+|+|++|+|+|||||||+.||+ +|++++|++|+++|+.++...|.+
T Consensus 146 -----~~g~~~~l~rg~sD~~A~~lA~~l~A~~l~i~tDV~GV~~~dP~~~~~a~~i~~ls~~ea~~l~~~G~~------ 214 (403)
T PRK08210 146 -----ENGDITTLGRGGSDTTAAALGVALKAEYVDIYTDVDGIMTADPRIVEDARLLDVVSYNEVFQMAYQGAK------ 214 (403)
T ss_pred -----CCCCEEEeCCCchHHHHHHHHHHcCCCEEEEEECCCCCCcCCCCcCCCCeECCccCHHHHHHHHHCCcc------
Confidence 13333 2 5899999999999999999999999999999996 899999999999999987765532
Q ss_pred CchHHHHHHHHHHHcCCcEEEEeCCCcchHHHHHcCCceeeEEecC
Q 006484 238 GMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 283 (643)
Q Consensus 238 gM~~Kl~aa~~a~~~gv~v~I~~g~~~~~l~~~~~g~~~GT~i~~~ 283 (643)
..|++++..+.++++|++|.|.+.+. .||+|...
T Consensus 215 --v~~~~a~~~~~~~~i~i~i~~~~~~~----------~gT~I~~~ 248 (403)
T PRK08210 215 --VIHPRAVEIAMQANIPLRIRSTYSDS----------PGTLITSL 248 (403)
T ss_pred --ccCHHHHHHHHHCCCeEEEEecCCCc----------CCcEEEec
Confidence 45778999999999999999987542 39999764
No 190
>PRK06635 aspartate kinase; Reviewed
Probab=99.94 E-value=1.6e-26 Score=250.64 Aligned_cols=232 Identities=22% Similarity=0.275 Sum_probs=175.8
Q ss_pred cceEEEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcCCCcccccCcccchhHH
Q 006484 14 VKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGK 93 (643)
Q Consensus 14 ~~~iVIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 93 (643)
|+++||||||+++.++ +.+++++++|+.+++.|+++||||||++..+..+++..+... ...+ . -..+
T Consensus 1 m~~iViK~GGs~l~~~------~~~~~~~~~i~~~~~~g~~~vvV~sg~~~~~~~l~~~~~~~~-~~~~--~----~~~~ 67 (404)
T PRK06635 1 MALIVQKFGGTSVGDV------ERIKRVAERVKAEVEAGHQVVVVVSAMGGTTDELLDLAKEVS-PLPD--P----RELD 67 (404)
T ss_pred CCeEEEeECCcccCCH------HHHHHHHHHHHHHHHcCCCEEEEEeCCCCcHHHHHHHHHHhc-cCCC--H----HHHH
Confidence 3589999999999864 368999999999999999999999986666665554332211 0001 1 1234
Q ss_pred HHHHhchHHHHHHHHHHhccCCCCcc-----ee-EecccccCcchhhchHHHHHHHHHhCCCeeEecCCCceeccCCCCC
Q 006484 94 ACAAVGQSSLMALYDTLFSQLDVTSS-----QL-LVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYE 167 (643)
Q Consensus 94 ~~~a~G~~~~~~~~~~~l~~~g~~~~-----~~-~~t~~~~~~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~ 167 (643)
.+.++|+..+..++...|...|+++. ++ ++++.+|.+......+.+.++.+++.|.|||++|+-+...
T Consensus 68 ~~~~~Ge~~~~~~~~~~l~~~g~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ipVi~g~~~~~~------ 141 (404)
T PRK06635 68 MLLSTGEQVSVALLAMALQSLGVKARSFTGWQAGIITDSAHGKARITDIDPSRIREALDEGDVVVVAGFQGVDE------ 141 (404)
T ss_pred HHhhhhHHHHHHHHHHHHHhCCCCeEEeChhhCCEEecCCCCceEeeecCHHHHHHHHhCCCEEEecCccEeCC------
Confidence 77888988877788899999998863 33 3444444332223334688999999999999988433221
Q ss_pred CCCce----eecchhHHHHHHhhcCCCEEEEeccCCccccCCCC-CCCccceeeeecccchhHHhcCCCCCccCCCchHH
Q 006484 168 DSSGI----FWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAK 242 (643)
Q Consensus 168 ~~~~~----~~~~D~~A~~lA~~L~Ad~li~lTdVdGVy~~~P~-~p~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~K 242 (643)
.+.. ++|+|++|+.+|.+|+||+|+++|||||||++||+ +|++++|++++++|+.++... |.+..|
T Consensus 142 -~g~~~~l~rg~sD~~A~~lA~~l~A~~l~~~tDV~Gv~~~dP~~~~~a~~i~~i~~~e~~~l~~~--------g~~~~~ 212 (404)
T PRK06635 142 -DGEITTLGRGGSDTTAVALAAALKADECEIYTDVDGVYTTDPRIVPKARKLDKISYEEMLELASL--------GAKVLH 212 (404)
T ss_pred -CCCEEecCCCChHHHHHHHHHHhCCCEEEEEEcCCCCCcCCCCCCCCceECCccCHHHHHHHHHc--------CCcccC
Confidence 2222 25999999999999999999999999999999996 899999999999999876543 445678
Q ss_pred HHHHHHHHHcCCcEEEEeCCCcchHHHHHcCCceeeEEecC
Q 006484 243 VNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 283 (643)
Q Consensus 243 l~aa~~a~~~gv~v~I~~g~~~~~l~~~~~g~~~GT~i~~~ 283 (643)
++++..+.++|++++|.|++++ ..||++...
T Consensus 213 ~~a~~~~~~~~i~~~i~~~~~~----------~~gT~i~~~ 243 (404)
T PRK06635 213 PRSVEYAKKYNVPLRVRSSFSD----------NPGTLITGE 243 (404)
T ss_pred HHHHHHHHHcCceEEEEcCCCC----------CCCCEEeeC
Confidence 8899999999999999998754 248888765
No 191
>cd04253 AAK_UMPK-PyrH-Pf AAK_UMPK-PyrH-Pf: UMP kinase (UMPK)-Pf, the mostly archaeal uridine monophosphate kinase (uridylate kinase) enzymes that catalyze UMP phosphorylation and play a key role in pyrimidine nucleotide biosynthesis; regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway). The UMP kinase of Pyrococcus furiosus (Pf) is known to function as a homohexamer, with GTP and UTP being allosteric effectors. Like other related enzymes (carbamate kinase, aspartokinase, and N-acetylglutamate kinase) the E. coli and most bacterial UMPKs have a conserved, N-terminal, lysine residue proposed to function in the catalysis of the phosphoryl group transfer, whereas most archaeal UMPKs (this CD) appear to lack this residue and the Pyrococcus furiosus structure has an additional Mg ion bound to the ATP molecule which is proposed to function as the catalysis instead. Members of thi
Probab=99.94 E-value=4.7e-26 Score=226.11 Aligned_cols=219 Identities=20% Similarity=0.282 Sum_probs=157.4
Q ss_pred eEEEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcCCCcccccCcccchhHHHH
Q 006484 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKAC 95 (643)
Q Consensus 16 ~iVIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~ 95 (643)
++|||||||++++++ +.+.++++++.|+++.. |+++|||||||. +++.+...+.... +... .+...++
T Consensus 1 ~iViKlGGs~l~~~~---~~~~i~~~~~~i~~~~~-~~~iiiV~GgG~-~a~~~~~~~~~~~-----~~~~--~~d~~g~ 68 (221)
T cd04253 1 RIVISLGGSVLAPEK---DADFIKEYANVLRKISD-GHKVAVVVGGGR-LAREYISVARKLG-----ASEA--FLDEIGI 68 (221)
T ss_pred CEEEEeccceeCCCC---ChHHHHHHHHHHHHHhC-CCEEEEEECCCH-HHHHHHHHHHHcC-----CCHH--HHHHhcC
Confidence 579999999997653 56778999999998865 789999999977 5665544333211 0000 0001111
Q ss_pred HHhchHHHHHHHHHHhccCCCCcceeEecccccCcchhhchHHHHHHHHHhCCCeeEecCCCceeccCCCCCCCCceeec
Q 006484 96 AAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWD 175 (643)
Q Consensus 96 ~a~G~~~~~~~~~~~l~~~g~~~~~~~~t~~~~~~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~~~~~~~~ 175 (643)
....++ ..++..++. .++++..+ ..+.+..+++.|.|||++|+. + ..+
T Consensus 69 ~~~~ln--~~~~~~~l~-~~~~~~~~---------------~~~~~~~~l~~g~vpv~~G~~---~-----------~~s 116 (221)
T cd04253 69 MATRLN--ARLLIAALG-DAYPPVPT---------------SYEEALEAMFTGKIVVMGGTE---P-----------GQS 116 (221)
T ss_pred HHHHHH--HHHHHHHHh-cCCCcCCC---------------CHHHHHHHHHcCCeEEEECCC---C-----------CCc
Confidence 111111 112233332 44432211 134677899999999998731 1 157
Q ss_pred chhHHHHHHhhcCCCEEEEeccCCccccCCCC-CCCccceeeeecccchhHHhcCCCCCccCCC-chHHHHHHHHHHHcC
Q 006484 176 NDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGG-MTAKVNAAYCAACAG 253 (643)
Q Consensus 176 ~D~~A~~lA~~L~Ad~li~lTdVdGVy~~~P~-~p~a~~i~~i~~~e~~~~~~~g~~~~~~~gg-M~~Kl~aa~~a~~~g 253 (643)
+|++|+.+|.+|+||+|+++|||||||++||+ +|++++|++|+++|+.++.... + ...|+ |..|+.++..+.+.|
T Consensus 117 ~D~~a~~lA~~l~a~~li~~tdVdGVy~~dP~~~~~a~~i~~i~~~e~~~~~~~~-~--~~~g~~~~~d~~a~~~~~~~g 193 (221)
T cd04253 117 TDAVAALLAERLGADLLINATNVDGVYSKDPRKDPDAKKFDRLSADELIDIVGKS-S--WKAGSNEPFDPLAAKIIERSG 193 (221)
T ss_pred cHHHHHHHHHHcCCCEEEEEeCCCeeECCCCCCCCCCeEeeEeCHHHHHHHccCC-C--cCCCCCcchHHHHHHHHHHCC
Confidence 89999999999999999999999999999995 8999999999998887654321 1 22343 678999999999999
Q ss_pred CcEEEEeCCCcchHHHHHcCCceeeEEe
Q 006484 254 IPVVITSGFAMDSIIKVLEGKRVGTLFH 281 (643)
Q Consensus 254 v~v~I~~g~~~~~l~~~~~g~~~GT~i~ 281 (643)
++++|+||+.|+.|.+.++|+..||+|.
T Consensus 194 i~~~I~~g~~p~~l~~~l~g~~~GT~I~ 221 (221)
T cd04253 194 IKTIVVDGRDPENLERALKGEFVGTIIE 221 (221)
T ss_pred CeEEEECCCCccHHHHHHCCCCCCeEeC
Confidence 9999999999999999999988999873
No 192
>COG0527 LysC Aspartokinases [Amino acid transport and metabolism]
Probab=99.94 E-value=1.1e-25 Score=241.90 Aligned_cols=239 Identities=21% Similarity=0.284 Sum_probs=185.7
Q ss_pred ceEEEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcC-----------------
Q 006484 15 KRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVN----------------- 77 (643)
Q Consensus 15 ~~iVIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~----------------- 77 (643)
+++|.||||+++.+. ++++..++.|+...+.|.++|+|.++++.++..++...+...
T Consensus 2 ~~iV~KFGGTSva~~------e~i~~va~iv~~~~~~g~~vVVVvSA~~~vTd~Lv~~a~~~~~~~~~~~~~~~~~~~~e 75 (447)
T COG0527 2 RLIVQKFGGTSVADA------ERILRVADIVKEDSEEGVKVVVVVSAMGGVTDLLVALAEGAESGRDAVAEQRHRDIASE 75 (447)
T ss_pred ceEEEEeCCcccCCH------HHHHHHHHHHHhhhhcCCcEEEEECCCCCchHHHHHHHhhcccccchhHHHHHHHHHHH
Confidence 389999999999974 368999999999988899999999998878887776655321
Q ss_pred --CCccc---ccCcc----------------cchhHHHHHHhchHHHHHHHHHHhccCCCCcce-----e-EecccccCc
Q 006484 78 --SSLAD---LQKPQ----------------NELDGKACAAVGQSSLMALYDTLFSQLDVTSSQ-----L-LVTDSDFRD 130 (643)
Q Consensus 78 --~~~~~---l~~~~----------------~~l~~~~~~a~G~~~~~~~~~~~l~~~g~~~~~-----~-~~t~~~~~~ 130 (643)
..+.. +.... ..-....+.+.|+.....++...|+..|+++.. . +.++.++.+
T Consensus 76 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~ilS~GE~~Sa~lla~~L~~~Gv~A~~~~~~~~~i~t~~~~~~ 155 (447)
T COG0527 76 LILDPFIAARLAEVIAEFKKVLLGIALLGEVSPRERDELLSLGERLSAALLAAALNALGVDARSLDGRQAGIATDSNHGN 155 (447)
T ss_pred HhhcchhhhhHhhhHhhhhHHhhhhhhccCCCHHHHHHHHhhchHHHHHHHHHHHHhCCCceEEEchHHceeeecCcccc
Confidence 11100 00000 001224778999999888999999999987653 3 334445555
Q ss_pred chhhchHHHH-HHHHHhCCCeeEecCCCceeccCCCCCCCCce--e--ecchhHHHHHHhhcCCCEEEEeccCCccccCC
Q 006484 131 EDFRKQLYDT-VQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI--F--WDNDSLAGLLALELKADLLVLLSDVEGLYSGP 205 (643)
Q Consensus 131 ~~~~~~~~~~-i~~ll~~g~iPVv~g~d~v~~~~~~~~~~~~~--~--~~~D~~A~~lA~~L~Ad~li~lTdVdGVy~~~ 205 (643)
........+. +..+++.|.|||+.||.+... +|.. + ++||++|+.||.+|+||+|.|+|||||||+.|
T Consensus 156 a~i~~~~~~~~l~~~~~~~~v~Vv~GF~G~~~-------~G~~tTLGRGGSD~SA~~laa~l~Ad~~~I~TDVdGI~TaD 228 (447)
T COG0527 156 ARILDEDSERRLLRLLEEGKVPVVAGFQGINE-------DGETTTLGRGGSDYSAAALAAALGADEVEIWTDVDGVYTAD 228 (447)
T ss_pred cccchhhhhhhHHHHhcCCcEEEecCceeecC-------CCCEEEeCCCcHHHHHHHHHHHcCCCEEEEEECCCCCccCC
Confidence 4433334455 888999999999999766554 2222 4 99999999999999999999999999999999
Q ss_pred CC-CCCccceeeeecccchhHHhcCCCCCccCCCchHHHHHHHHHHHcCCcEEEEeCCCcchHHHHHcCCceeeEEecC
Q 006484 206 PS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 283 (643)
Q Consensus 206 P~-~p~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gv~v~I~~g~~~~~l~~~~~g~~~GT~i~~~ 283 (643)
|+ .|++++|++||++|+.++...|++ .-++++...+.+.|||++|.|.++|+ ..||+|...
T Consensus 229 PRiVp~Ar~i~~isyeEa~ELA~~GAk--------VLHprav~pa~~~~Ip~~i~~t~~p~---------~~GTlI~~~ 290 (447)
T COG0527 229 PRIVPDARLLPEISYEEALELAYLGAK--------VLHPRAVEPAMRSGIPLRIKNTFNPD---------APGTLITAE 290 (447)
T ss_pred CCCCCcceEcCccCHHHHHHHHHCCch--------hcCHHHHHHHHhcCCcEEEEecCCCC---------CCceEEecC
Confidence 97 999999999999999987776644 45678999999999999999988874 469999987
No 193
>COG0528 PyrH Uridylate kinase [Nucleotide transport and metabolism]
Probab=99.94 E-value=4.8e-25 Score=210.81 Aligned_cols=230 Identities=20% Similarity=0.267 Sum_probs=170.9
Q ss_pred ccceEEEEeCCcccccCCC-ccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcCCCcccccCcccchh
Q 006484 13 DVKRLVVKVGTAVVTRSDG-RLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELD 91 (643)
Q Consensus 13 ~~~~iVIKlGGs~l~~~~~-~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~~~~~~l~~~~~~l~ 91 (643)
+++++|+|+||++|...++ .++.+.+++++++|+++++.|++|.||.|||. +.+.+...+.++. ... .+
T Consensus 4 ~~~rillkLsGe~l~g~~~~gid~~~i~~~a~~i~~~~~~g~eV~iVvGGGn-i~Rg~~~~~~g~~-------r~~--~D 73 (238)
T COG0528 4 KYMRILLKLSGEALAGEQGFGIDPEVLDRIANEIKELVDLGVEVAVVVGGGN-IARGYIGAAAGMD-------RVT--AD 73 (238)
T ss_pred ceEEEEEEeecceecCCCCCCCCHHHHHHHHHHHHHHHhcCcEEEEEECCCH-HHHhHHHHHcCCc-------hhh--hh
Confidence 5689999999999987654 58889999999999999999999999999977 4554443333322 111 01
Q ss_pred HHHHHHhchHHHHHHHHHHhccCCCCcceeEecccccCc-chhhchHHHHHHHHHhCCCeeEecCCCceeccCCCCCCCC
Q 006484 92 GKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRD-EDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSS 170 (643)
Q Consensus 92 ~~~~~a~G~~~~~~~~~~~l~~~g~~~~~~~~t~~~~~~-~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~~~ 170 (643)
..++.+.-.+.+ ++..+|...+++.. +.+...... ...+ ......+.++.|.|+|+.| . .+
T Consensus 74 ~mGmlaTvmNal--~L~~aL~~~~~~~~--v~sai~~~~~~e~~--~~~~A~~~l~~grVvIf~g-----G-------tg 135 (238)
T COG0528 74 YMGMLATVMNAL--ALQDALERLGVDTR--VQSAIAMPQVAEPY--SRREAIRHLEKGRVVIFGG-----G-------TG 135 (238)
T ss_pred HHHHHHHHHHHH--HHHHHHHhcCCcce--ecccccCccccCcc--CHHHHHHHHHcCCEEEEeC-----C-------CC
Confidence 122322222221 45578888887644 122111110 1111 2345667899999999965 1 34
Q ss_pred ceeecchhHHHHHHhhcCCCEEEEecc-CCccccCCC-CCCCccceeeeecccchhHHhcCCCCCccCCCchHHHHHHHH
Q 006484 171 GIFWDNDSLAGLLALELKADLLVLLSD-VEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYC 248 (643)
Q Consensus 171 ~~~~~~D~~A~~lA~~L~Ad~li~lTd-VdGVy~~~P-~~p~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~ 248 (643)
.++.++|++|+++|+.++||.|+..|+ |||||++|| ++|||+++++||+.|+.+... . ...+.|...
T Consensus 136 ~P~fTTDt~AALrA~ei~ad~ll~atn~VDGVY~~DPkk~pdA~~~~~Lty~e~l~~~l---------~--vmD~tA~~l 204 (238)
T COG0528 136 NPGFTTDTAAALRAEEIEADVLLKATNKVDGVYDADPKKDPDAKKYDTLTYDEVLKIGL---------K--VMDPTAFSL 204 (238)
T ss_pred CCCCchHHHHHHHHHHhCCcEEEEeccCCCceeCCCCCCCCCceecccCCHHHHHHhcC---------e--eecHHHHHH
Confidence 567999999999999999999999995 999999999 499999999999999875321 1 235788889
Q ss_pred HHHcCCcEEEEeCCCcchHHHHHcCCceeeEEe
Q 006484 249 AACAGIPVVITSGFAMDSIIKVLEGKRVGTLFH 281 (643)
Q Consensus 249 a~~~gv~v~I~~g~~~~~l~~~~~g~~~GT~i~ 281 (643)
+.++++|++|+|.+.++++..++.|+..||.+.
T Consensus 205 ~~~~~i~i~Vfn~~~~~~l~~~~~ge~~gT~V~ 237 (238)
T COG0528 205 ARDNGIPIIVFNINKPGNLKRALKGEEVGTIVE 237 (238)
T ss_pred HHHcCCcEEEEeCCCCccHHHHHcCCCCceEec
Confidence 999999999999999999999999999999875
No 194
>PRK07431 aspartate kinase; Provisional
Probab=99.93 E-value=1.8e-25 Score=252.81 Aligned_cols=234 Identities=21% Similarity=0.257 Sum_probs=173.8
Q ss_pred ceEEEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcCCCcccccCcccchhHHH
Q 006484 15 KRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKA 94 (643)
Q Consensus 15 ~~iVIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~~~~~~l~~~~~~l~~~~ 94 (643)
+++|+||||+++.+. +.++.++++|+.+++.|+++||||||++.+.+.++.......... ..+ ..+.
T Consensus 2 ~~iViKfGGss~~~~------~~i~~~a~~I~~~~~~g~~vvvV~sa~g~~t~~l~~~~~~~t~~~-~~~------~~~~ 68 (587)
T PRK07431 2 ALIVQKFGGTSVGSV------ERIQAVAQRIARTKEAGNDVVVVVSAMGKTTDELVKLAKEISSNP-PRR------EMDM 68 (587)
T ss_pred CeEEEEECchhcCCH------HHHHHHHHHHHHHHHCCCCEEEEECCCCchhHHHHHHHHHhccCC-CHH------HHHH
Confidence 589999999999764 468999999999999999999999976667666544332221110 011 2346
Q ss_pred HHHhchHHHHHHHHHHhccCCCCccee------EecccccCcchhhchHHHHHHHHHhCCCeeEecCCCceeccCCCCCC
Q 006484 95 CAAVGQSSLMALYDTLFSQLDVTSSQL------LVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYED 168 (643)
Q Consensus 95 ~~a~G~~~~~~~~~~~l~~~g~~~~~~------~~t~~~~~~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~ 168 (643)
+.+.|+.....++...|...|+++..+ ++++..+..........+.++.+++.|.|||++|+.+..... .
T Consensus 69 ~ls~Ge~~s~~l~~~~l~~~gi~a~~l~~~~~~~~~~~~~~~~~i~~~~~~~l~~~l~~g~vpVv~g~~g~~~~~----~ 144 (587)
T PRK07431 69 LLSTGEQVSIALLSMALHELGQPAISLTGAQVGIVTESEHGRARILEIKTDRIQRHLDAGKVVVVAGFQGISLSS----N 144 (587)
T ss_pred HHHHhHHHHHHHHHHHHHHCCCCeEEechhHcCeEecCCCCceeeeeccHHHHHHHHhCCCeEEecCCcCCCCCC----C
Confidence 778898777777888899999875432 333333322111223467899999999999999854432110 0
Q ss_pred CCce---eecchhHHHHHHhhcCCCEEEEeccCCccccCCCC-CCCccceeeeecccchhHHhcCCCCCccCCCchHHHH
Q 006484 169 SSGI---FWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVN 244 (643)
Q Consensus 169 ~~~~---~~~~D~~A~~lA~~L~Ad~li~lTdVdGVy~~~P~-~p~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~Kl~ 244 (643)
.+.. ++++|++|+.+|.+|+||+|+|+|||||||++||+ +|++++|++|+++|+.++... +.++|. ++
T Consensus 145 g~~~~lgrggsD~~A~~lA~~l~A~~l~i~TDVdGVyt~DP~~~~~a~~i~~i~~~e~~el~~~------G~~v~~--~~ 216 (587)
T PRK07431 145 LEITTLGRGGSDTSAVALAAALGADACEIYTDVPGVLTTDPRLVPEAQLMDEISCDEMLELASL------GASVLH--PR 216 (587)
T ss_pred CCEeecCCCchHHHHHHHHHHcCCCEEEEEeCCCccCcCCCCCCCCCeECCCcCHHHHHHHHhC------CCceEh--HH
Confidence 1111 37999999999999999999999999999999996 899999999999999987654 366776 67
Q ss_pred HHHHHHHcCCcEEEEeCCCcchHHHHHcCCceeeEEecC
Q 006484 245 AAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 283 (643)
Q Consensus 245 aa~~a~~~gv~v~I~~g~~~~~l~~~~~g~~~GT~i~~~ 283 (643)
++..+.++|+|++|.|++. + ..||+|...
T Consensus 217 a~~~~~~~~i~i~i~~~~~-~---------~~GT~i~~~ 245 (587)
T PRK07431 217 AVEIARNYGVPLVVRSSWS-D---------APGTLVTSP 245 (587)
T ss_pred HHHHHHHcCCcEEEecCCC-C---------CCCeEEEeC
Confidence 9999999999999999872 1 359999765
No 195
>cd04244 AAK_AK-LysC-like AAK_AK-LysC-like: Amino Acid Kinase Superfamily (AAK), AK-LysC-like; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the lysine-sensitive AK isoenzyme found in higher plants. The lysine-sensitive AK isoenzyme is a monofunctional protein. It is involved in the overall regulation of the aspartate pathway and can be synergistically inhibited by S-adenosylmethionine. Also included in this CD is an uncharacterized LysC-like AK found in Euryarchaeota and some bacteria. AK catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP.
Probab=99.91 E-value=9.1e-24 Score=217.54 Aligned_cols=234 Identities=21% Similarity=0.309 Sum_probs=170.2
Q ss_pred eEEEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcCC----Cccc---------
Q 006484 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNS----SLAD--------- 82 (643)
Q Consensus 16 ~iVIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~~----~~~~--------- 82 (643)
++|.||||+++.+. +.+..+++.|... ..+.++|+|+|+.+.++..++........ .+..
T Consensus 1 ~~V~KFGGtSv~~~------~~~~~v~~iI~~~-~~~~~~vvVvSA~~~iTd~L~~~~~~~~~~~~~~~~~~l~~i~~~h 73 (298)
T cd04244 1 RLVMKFGGTSVGSA------ERIRHVADLVGTY-AEGHEVVVVVSAMGGVTDRLLLAAEAAVSGRIAGVKDFIEILRLRH 73 (298)
T ss_pred CEEEEECcccCCCH------HHHHHHHHHHHHh-hcCCCEEEEEeCCCCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHH
Confidence 47999999999974 3578888888765 45789999999988888877554321110 0000
Q ss_pred ------c--cCcc---------------------------cchhHHHHHHhchHHHHHHHHHHhccCCCCccee------
Q 006484 83 ------L--QKPQ---------------------------NELDGKACAAVGQSSLMALYDTLFSQLDVTSSQL------ 121 (643)
Q Consensus 83 ------l--~~~~---------------------------~~l~~~~~~a~G~~~~~~~~~~~l~~~g~~~~~~------ 121 (643)
+ +... ..-....+.+.|+..+..++...|+..|+++..+
T Consensus 74 ~~~~~~l~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~d~i~s~GE~lSa~lla~~L~~~Gi~a~~l~~~~~~ 153 (298)
T cd04244 74 IKAAKEAISDEEIAEVESIIDSLLEELEKLLYGIAYLGELTPRSRDYIVSFGERLSAPIFSAALRSLGIKARALDGGEAG 153 (298)
T ss_pred HHHHHHhhcchhhHHHHHHHHHHHHHHHHHHHHHHhhhcCCchHhhHhccHhHHHHHHHHHHHHHhCCCCeEEEcHHHcc
Confidence 0 0000 0001235668888877778889999999876533
Q ss_pred EecccccCcch----hhchHHHHHHHHHhCCCeeEecCCCceeccCCCCCCCCce--e--ecchhHHHHHHhhcCCCEEE
Q 006484 122 LVTDSDFRDED----FRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI--F--WDNDSLAGLLALELKADLLV 193 (643)
Q Consensus 122 ~~t~~~~~~~~----~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~~~~~--~--~~~D~~A~~lA~~L~Ad~li 193 (643)
+++.+++.+.. .+......+..+++.|.|||+.|+-+.. ..|.. + +++|++|+.+|.+|+|++++
T Consensus 154 i~t~~~~~~a~~~~~~~~~i~~~l~~ll~~~~vpVv~Gfig~~-------~~g~~ttlgRggsD~~A~~~A~~l~a~~l~ 226 (298)
T cd04244 154 IITDDNFGNARPLPATYERVRKRLLPMLEDGKIPVVTGFIGAT-------EDGAITTLGRGGSDYSATIIGAALDADEIW 226 (298)
T ss_pred eeecCcccccccchhHHHHHHHHHHHHhhcCCEEEEeCccccC-------CCCCEEEecCCChHHHHHHHHHHcCCCEEE
Confidence 35555554321 1222334566788999999998732221 13332 2 79999999999999999999
Q ss_pred EeccCCccccCCCC-CCCccceeeeecccchhHHhcCCCCCccCCCchHHHHHHHHHHHcCCcEEEEeCCCcchHHHHHc
Q 006484 194 LLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLE 272 (643)
Q Consensus 194 ~lTdVdGVy~~~P~-~p~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gv~v~I~~g~~~~~l~~~~~ 272 (643)
|+|||||||+.||+ +|++++|++|+++|+.++.. .|.++.+++++..+.++|||++|.|+++|+
T Consensus 227 i~tdV~Gv~~~dP~~~~~a~~i~~lsy~Ea~el~~--------~Ga~vlhp~ai~~a~~~~Ipi~i~n~~~p~------- 291 (298)
T cd04244 227 IWKDVDGVMTADPRIVPEARTIPRLSYAEAMELAY--------FGAKVLHPRTVEPAMEKGIPVRVKNTFNPE------- 291 (298)
T ss_pred EEECCCCCCCCCCCCCCCCeEcCccCHHHHHHHHh--------CCCcccCHHHHHHHHHcCCcEEEeeCCCCC-------
Confidence 99999999999996 89999999999999998765 356788899999999999999999999875
Q ss_pred CCceeeEE
Q 006484 273 GKRVGTLF 280 (643)
Q Consensus 273 g~~~GT~i 280 (643)
..||+|
T Consensus 292 --~~GT~I 297 (298)
T cd04244 292 --APGTLI 297 (298)
T ss_pred --CCCCEe
Confidence 358876
No 196
>TIGR00657 asp_kinases aspartate kinase. The Lys-sensitive enzyme of Bacillus subtilis resembles the E. coli form but is an alpha 2/beta 2 heterotetramer, where the beta subunit is translated from an in-phase alternative initiator at Met-246. This may be a feature of a number of closely related forms, including a paralog from B. subtilis.
Probab=99.91 E-value=5.6e-24 Score=232.79 Aligned_cols=238 Identities=22% Similarity=0.322 Sum_probs=178.3
Q ss_pred eEEEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcCCCcc-c----ccC-----
Q 006484 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLA-D----LQK----- 85 (643)
Q Consensus 16 ~iVIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~~~~~-~----l~~----- 85 (643)
++|+||||+++.+. +.+.++++.|....+.|+++|+|||+++.++..++........... . +..
T Consensus 2 ~~V~KFGGssv~~~------~~~~~v~~~i~~~~~~~~~~vvVvSA~~~~Td~L~~~~~~~~~~~~~~~~~~i~~~~~~~ 75 (441)
T TIGR00657 2 LIVQKFGGTSVGNA------ERIRRVAKIVLKEKKKGNQVVVVVSAMAGVTDALVELAEQASPGPSKEFLEKIREKHIEI 75 (441)
T ss_pred CEEEEeCcccCCCH------HHHHHHHHHHHHHHhcCCCEEEEEcCCCCCHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Confidence 58999999999974 3688999999988888999999999999999987654432211100 0 000
Q ss_pred ----------------cc-------cchhHHHHHHhchHHHHHHHHHHhccCCCCccee------EecccccCcch-hhc
Q 006484 86 ----------------PQ-------NELDGKACAAVGQSSLMALYDTLFSQLDVTSSQL------LVTDSDFRDED-FRK 135 (643)
Q Consensus 86 ----------------~~-------~~l~~~~~~a~G~~~~~~~~~~~l~~~g~~~~~~------~~t~~~~~~~~-~~~ 135 (643)
.+ .......+.+.|+.....++...|...|+++..+ +++.+++.+.. ...
T Consensus 76 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~ils~GE~~s~~l~~~~l~~~Gi~a~~l~~~~~~l~t~~~~~~~~~~~~ 155 (441)
T TIGR00657 76 LERLIPQAIAEELKRLLDAELVLEEKPREMDRILSFGERLSAALLSAALEELGVKAVSLLGGEAGILTDSNFGRARVIIE 155 (441)
T ss_pred HHHhhhHHHHHHHHHHHHHHHhhhcCcchHhheecHHHHHHHHHHHHHHHhCCCCCEEEEcCcceEEecCCCCceeecHh
Confidence 00 0001234567788776667889999999876543 44555554332 234
Q ss_pred hHHHHHHHHHhCCCeeEecCCCceeccCCCCCCCCce----eecchhHHHHHHhhcCCCEEEEeccCCccccCCCC-CCC
Q 006484 136 QLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI----FWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPN 210 (643)
Q Consensus 136 ~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~~~~~----~~~~D~~A~~lA~~L~Ad~li~lTdVdGVy~~~P~-~p~ 210 (643)
.+.+.+..+++.|.|||++|+.+... .|.. ++++|++|+.+|.+|+|++|+++|||||||++||+ +|+
T Consensus 156 ~~~~~l~~~l~~~~vpVv~G~~g~~~-------~g~~~~lgrggsD~~A~~lA~~l~a~~l~~~tDV~Gv~~~DP~~~~~ 228 (441)
T TIGR00657 156 ILTERLEPLLEEGIIPVVAGFQGATE-------KGETTTLGRGGSDYTAALLAAALKADECEIYTDVDGIYTTDPRIVPD 228 (441)
T ss_pred hhHHHHHHHHhcCCEEEEeCcEeeCC-------CCCEeecCCCchHHHHHHHHHHcCCCEEEEEECCCCCCcCCCCCCCC
Confidence 56789999999999999988433221 2222 25899999999999999999999999999999996 899
Q ss_pred ccceeeeecccchhHHhcCCCCCccCCCchHHHHHHHHHHHcCCcEEEEeCCCcchHHHHHcCCceeeEEecC
Q 006484 211 SKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 283 (643)
Q Consensus 211 a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gv~v~I~~g~~~~~l~~~~~g~~~GT~i~~~ 283 (643)
++++++|+++|+.++..+ |.+..+++++..+.+.++|++|.|++.|+ ..||+|...
T Consensus 229 a~~i~~is~~ea~el~~~--------G~~v~~~~a~~~~~~~~i~i~i~~~~~~~---------~~GT~I~~~ 284 (441)
T TIGR00657 229 ARRIDEISYEEMLELASF--------GAKVLHPRTLEPAMRAKIPIVVKSTFNPE---------APGTLIVAS 284 (441)
T ss_pred CeECCccCHHHHHHHHhc--------CCcccCHHHHHHHHHcCCeEEEecCCCCC---------CCceEEEeC
Confidence 999999999999986653 34567888999999999999999998774 359999765
No 197
>PRK08373 aspartate kinase; Validated
Probab=99.91 E-value=2.3e-23 Score=216.41 Aligned_cols=235 Identities=22% Similarity=0.266 Sum_probs=170.0
Q ss_pred ccceEEEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcCC--------Cccc--
Q 006484 13 DVKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNS--------SLAD-- 82 (643)
Q Consensus 13 ~~~~iVIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~~--------~~~~-- 82 (643)
+++++|.||||+++.+. ++.+++.|... ..|.++|+|.|+.+.++..+++....... .+..
T Consensus 2 ~~~m~V~KFGGsSv~~~--------~~~v~~ii~~~-~~~~~vvVVVSA~~gvTd~L~~l~~~~~~~~l~~i~~~h~~~~ 72 (341)
T PRK08373 2 VEKMIVVKFGGSSVRYD--------FEEALELVKYL-SEENEVVVVVSALKGVTDKLLKLAETFDKEALEEIEEIHEEFA 72 (341)
T ss_pred CCCCEEEEECCcchHhH--------HHHHHHHHHHH-hcCCCEEEEecCCchHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 56789999999999762 56777777744 45789999999999999887665432100 0000
Q ss_pred --c--c----------------CcccchhHHHHHHhchHHHHHHHHHHhccCCCCcc-----eeEecccccCcchh----
Q 006484 83 --L--Q----------------KPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSS-----QLLVTDSDFRDEDF---- 133 (643)
Q Consensus 83 --l--~----------------~~~~~l~~~~~~a~G~~~~~~~~~~~l~~~g~~~~-----~~~~t~~~~~~~~~---- 133 (643)
+ . .....-....+.+.|+..+..++...|...|+++. +++.+++++.+...
T Consensus 73 ~~L~~~~~~~~~~l~~~~~~~~~~~~~~~~D~ils~GE~lSa~lla~~L~~~Gi~a~~l~~~~~i~t~~~~~~a~i~~~~ 152 (341)
T PRK08373 73 KRLGIDLEILSPYLKKLFNSRPDLPSEALRDYILSFGERLSAVLFAEALENEGIKGKVVDPWEILEAKGSFGNAFIDIKK 152 (341)
T ss_pred HHhccchhhHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHCCCceEEEeHHHheeecCCccceeechhh
Confidence 0 0 00001113578899999888889999999998764 44556666554321
Q ss_pred hchHHHHHHHHHhCCCeeEecCCCceeccCCCCCCCCce--e--ecchhHHHHHHhhcCCCEEEEeccCCccccCCCC-C
Q 006484 134 RKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI--F--WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-E 208 (643)
Q Consensus 134 ~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~~~~~--~--~~~D~~A~~lA~~L~Ad~li~lTdVdGVy~~~P~-~ 208 (643)
...+.+.+..+++.|.|||++|+.+ . .+|.. + +++|++|+.+|.+|+|++++|+|||||||++||+ .
T Consensus 153 s~~~~~~l~~~l~~g~VpVv~Gf~g--~------~~G~~ttLGRGGSD~tA~~lA~~L~A~~v~i~TDVdGVytaDP~~v 224 (341)
T PRK08373 153 SKRNVKILYELLERGRVPVVPGFIG--N------LNGFRATLGRGGSDYSAVALGVLLNAKAVLIMSDVEGIYTADPKLV 224 (341)
T ss_pred hhhhHHHHHHHHhCCcEEEEeCCcc--C------CCCeEEEcCCCchHHHHHHHHHHcCCCEEEEEECCCccCCCCCCCC
Confidence 1133578899999999999998432 1 12322 2 6999999999999999999999999999999996 8
Q ss_pred CCccceeeeecccchhHHhcCCCCCccCCCchHHHHHHHHHHHcCCcEEEEeCCCcchHHHHHcCCceeeEEecC
Q 006484 209 PNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 283 (643)
Q Consensus 209 p~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gv~v~I~~g~~~~~l~~~~~g~~~GT~i~~~ 283 (643)
|++++|++|+++|+.++. .+||..+...+...++.++|++|.|.+++ ..||+|...
T Consensus 225 ~~A~~i~~isy~Ea~ela---------~~Gakvlhp~ai~~a~~~Ipi~v~~t~~~----------~~GT~I~~~ 280 (341)
T PRK08373 225 PSARLIPYLSYDEALIAA---------KLGMKALHWKAIEPVKGKIPIIFGRTRDW----------RMGTLVSNE 280 (341)
T ss_pred CCCeEcccCCHHHHHHHH---------HCcChhhhHHHHHHHHcCCcEEEecCCCC----------CCCcEEecC
Confidence 999999999999998643 56777776666665544999999997654 248877543
No 198
>cd04259 AAK_AK-DapDC AAK_AK-DapDC: Amino Acid Kinase Superfamily (AAK), AK-DapDC; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the bifunctional enzyme AK - DAP decarboxylase (DapDC) found in some bacteria. Aspartokinase is the first enzyme in the aspartate metabolic pathway, catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. DapDC, which is the lysA gene product, catalyzes the decarboxylation of DAP to lysine.
Probab=99.90 E-value=6.1e-23 Score=210.43 Aligned_cols=235 Identities=19% Similarity=0.181 Sum_probs=170.2
Q ss_pred eEEEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcCC-Ccc----ccc------
Q 006484 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNS-SLA----DLQ------ 84 (643)
Q Consensus 16 ~iVIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~~-~~~----~l~------ 84 (643)
++|.||||+++.+.+ .++++++.|..-.+.+.++|+|.|+.+.++..++........ .+. .+.
T Consensus 1 ~~V~KFGGtSv~~~~------~~~~v~~ii~~~~~~~~~~vVVVSA~~gvTd~L~~~~~~a~~~~~~~~l~~i~~~~~~~ 74 (295)
T cd04259 1 WVVLKFGGTSVSSRA------RWDTIAKLAQKHLNTGGQPLIVCSALSGISNKLEALIDQALLDEHHSLFNAIQSRHLNL 74 (295)
T ss_pred CEEEEeCccccCCHH------HHHHHHHHHHHHhhcCCCEEEEEeCCCCCchHHHHHHHHHhccChHHHHHHHHHHHHHH
Confidence 369999999999753 578888877655556778999999988888876443321100 000 000
Q ss_pred ------Cc-----------------------ccchhHHHHHHhchHHHHHHHHHHhccCCCCcc-----eeEecccccCc
Q 006484 85 ------KP-----------------------QNELDGKACAAVGQSSLMALYDTLFSQLDVTSS-----QLLVTDSDFRD 130 (643)
Q Consensus 85 ------~~-----------------------~~~l~~~~~~a~G~~~~~~~~~~~l~~~g~~~~-----~~~~t~~~~~~ 130 (643)
.. ...-....+.+.|+..+..++...|+..|+++. ++++++.++..
T Consensus 75 ~~~L~~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~~d~i~s~GE~lSa~lla~~L~~~Gi~a~~ld~~~~i~~~~~~~~ 154 (295)
T cd04259 75 AEQLEVDADALLANDLAQLQRWLTGISLLKQASPRTRAEVLALGELMSTRLGAAYLEAQGLKVKWLDARELLTATPTLGG 154 (295)
T ss_pred HHHhhhhhhhHHHHHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEcHHHheeecccccc
Confidence 00 000112457789998888889999999998765 34455555432
Q ss_pred c-------hh-hchHHHHHHHHHhC-CCeeEecCCCceeccCCCCCCCCce--e--ecchhHHHHHHhhcCCCEEEEecc
Q 006484 131 E-------DF-RKQLYDTVQSLLDL-RVIPIFNENDAVSTRKAPYEDSSGI--F--WDNDSLAGLLALELKADLLVLLSD 197 (643)
Q Consensus 131 ~-------~~-~~~~~~~i~~ll~~-g~iPVv~g~d~v~~~~~~~~~~~~~--~--~~~D~~A~~lA~~L~Ad~li~lTd 197 (643)
. .. .....+.|...+.. +.|||+.|+.+... +|.. + +++|++|+.+|.+|+||.++++||
T Consensus 155 ~~~~~~~a~v~~~~~~~~l~~~l~~~~~v~Vv~GFig~~~-------~G~~ttLGrggsD~tA~~lA~~l~A~~l~i~Td 227 (295)
T cd04259 155 ETMNYLSARCESEYADALLQKRLADGAQLIITQGFIARNA-------HGETVLLGRGGSDTSAAYFAAKLQAARCEIWTD 227 (295)
T ss_pred cccccccceehhhhhHHHHHHHHhcCCceeEeCCceeeCC-------CCCEEEECCCChHHHHHHHHHHcCCCEEEEEEC
Confidence 1 10 01224567766665 67999998654433 2332 3 999999999999999999999999
Q ss_pred CCccccCCCC-CCCccceeeeecccchhHHhcCCCCCccCCCchHHHHHHHHHHHcCCcEEEEeCCCcchHHHHHcCCce
Q 006484 198 VEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRV 276 (643)
Q Consensus 198 VdGVy~~~P~-~p~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gv~v~I~~g~~~~~l~~~~~g~~~ 276 (643)
|||||+.||+ .|++++|++|+++|+.++.. .|++..|++++..+.++|+|++|.|++.|+ ..
T Consensus 228 V~Gvyt~DP~~~~~a~~i~~ls~~ea~~l~~--------~Ga~v~h~~a~~~a~~~~ipi~i~~~~~p~---------~~ 290 (295)
T cd04259 228 VPGLFTANPHEVPHARLLKRLDYDEAQEIAT--------MGAKVLHPRCIPPARRANIPMVVRSTERPE---------LS 290 (295)
T ss_pred CCccccCCCCCCCCCeEeceeCHHHHHHHHH--------cCCcccCHHHHHHHHHCCCCEEEEeCCCCC---------CC
Confidence 9999999996 79999999999999998665 456788999999999999999999999875 45
Q ss_pred eeEE
Q 006484 277 GTLF 280 (643)
Q Consensus 277 GT~i 280 (643)
||+|
T Consensus 291 GT~I 294 (295)
T cd04259 291 GTLI 294 (295)
T ss_pred CcEe
Confidence 8876
No 199
>cd04245 AAK_AKiii-YclM-BS AAK_AKiii-YclM-BS: Amino Acid Kinase Superfamily (AAK), AKiii-YclM-BS; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the lysine plus threonine-sensitive aspartokinase isoenzyme AKIII, a monofunctional class enzyme found in Bacilli (Bacillus subtilis YclM) and Clostridia species. Aspartokinase is the first enzyme in the aspartate metabolic pathway and catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. In Bacillus subtilis (BS), YclM is reported to be a single polypeptide of 50 kD. The Bacillus subtilis 168 AKIII is induced by lysine and repressed by threonine, and it is synergistically inhibited by lysine and threonine.
Probab=99.90 E-value=1.4e-22 Score=206.49 Aligned_cols=231 Identities=21% Similarity=0.212 Sum_probs=166.2
Q ss_pred EEEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCChh-------HhhHHHhhhhhhcCC--Cccc----c
Q 006484 17 LVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAV-------GVGRQRLRYRKLVNS--SLAD----L 83 (643)
Q Consensus 17 iVIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~-------~i~~~~~~~~~~~~~--~~~~----l 83 (643)
.|.||||+++.+.+ .++.+++.|.. .+.++++|+|+.. .++..++........ .+.. +
T Consensus 2 ~V~KFGGtSv~~~~------~i~~v~~ii~~---~~~~~vvVvSA~~~~~~~~~~vTd~L~~~~~~~~~~~~~~~~~~~i 72 (288)
T cd04245 2 KVVKFGGSSLASAE------QFQKVKAIVKA---DPERKIVVVSAPGKRFKDDTKVTDLLILYAEAVLAGEDTESIFEAI 72 (288)
T ss_pred EEEEECcCccCCHH------HHHHHHHHHHh---cCCCEEEEEcCCCCCCCchhhHHHHHHHHHHHHhcCcchHHHHHHH
Confidence 59999999998743 56777777653 3568999999875 477765443221100 0000 0
Q ss_pred ----------------------------c---CcccchhHHHHHHhchHHHHHHHHHHhccCCCCcce-----e-Eeccc
Q 006484 84 ----------------------------Q---KPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQ-----L-LVTDS 126 (643)
Q Consensus 84 ----------------------------~---~~~~~l~~~~~~a~G~~~~~~~~~~~l~~~g~~~~~-----~-~~t~~ 126 (643)
. ..........+.+.|+.....++...|+..|+++.. + ++|++
T Consensus 73 ~~~h~~~~~~L~~~~~~~~~i~~~~~~l~~~~~~~~~~~~d~i~s~GE~lSa~ll~~~L~~~Gi~a~~ld~~~~~i~t~~ 152 (288)
T cd04245 73 VDRYAEIADELGLPMSILEEIAEILENLANLDYANPDYLLDALKARGEYLNAQLMAAYLNYQGIDARYVIPKDAGLVVTD 152 (288)
T ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhhccCCHHHHHHHHHHhHHHHHHHHHHHHHHCCCCeEEEcHHHCceeecC
Confidence 0 000011224677899988878888999999987653 3 45666
Q ss_pred ccCcchhhchHHHHHHHHHhCCCeeEecCCCceeccCCCCCCCCce--e--ecchhHHHHHHhhcCCCEEEEeccCCccc
Q 006484 127 DFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI--F--WDNDSLAGLLALELKADLLVLLSDVEGLY 202 (643)
Q Consensus 127 ~~~~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~~~~~--~--~~~D~~A~~lA~~L~Ad~li~lTdVdGVy 202 (643)
+|.+........+.+..+++.+.|||+.|+-+... .|.. + +++|++|+.+|.+|+|+.+.++|||||||
T Consensus 153 ~~~~a~~~~~~~~~~~~~~~~~~v~Vv~Gf~g~~~-------~G~~ttLgRggSD~tAal~A~~l~A~~v~i~tdVdGvy 225 (288)
T cd04245 153 EPGNAQILPESYQKIKKLRDSDEKLVIPGFYGYSK-------NGDIKTFSRGGSDITGAILARGFQADLYENFTDVDGIY 225 (288)
T ss_pred CccccccchhhHHHHHHHHhCCCEEEEeCccccCC-------CCCEEEcCCCchHHHHHHHHHHcCCCEEEEEeCCCceE
Confidence 66544333334677888888899999998544332 2322 2 79999999999999999999999999999
Q ss_pred cCCCC-CCCccceeeeecccchhHHhcCCCCCccCCCchHHHHHHHHHHHcCCcEEEEeCCCcchHHHHHcCCceeeEE
Q 006484 203 SGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLF 280 (643)
Q Consensus 203 ~~~P~-~p~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gv~v~I~~g~~~~~l~~~~~g~~~GT~i 280 (643)
+.||+ +|+++.|++|+++|+.++..+| ..-|.| .+...+.++++|++|.|.++|+ ..||+|
T Consensus 226 taDPr~v~~A~~i~~lsy~EA~ela~~G------akVlhp--~ai~~a~~~~Ipi~v~n~~~p~---------~~GT~I 287 (288)
T cd04245 226 AANPRIVANPKPISEMTYREMRELSYAG------FSVFHD--EALIPAIEAGIPINIKNTNHPE---------APGTLI 287 (288)
T ss_pred CCCCCCCCCCeEeCccCHHHHHHHHHCC------CcccCH--HHHHHHHHCCCcEEEeeCCCCC---------CCCcee
Confidence 99996 8999999999999999876544 344555 5888999999999999998875 358876
No 200
>cd04257 AAK_AK-HSDH AAK_AK-HSDH: Amino Acid Kinase Superfamily (AAK), AK-HSDH; this CD includes the N-terminal catalytic domain of aspartokinase (AK) of the bifunctional enzyme AK - homoserine dehydrogenase (HSDH). These aspartokinases are found in bacteria (E. coli AKI-HSDHI, ThrA and E. coli AKII-HSDHII, MetL) and higher plants (Z. mays AK-HSDH). AK and HSDH are the first and third enzymes in the biosynthetic pathway of the aspartate family of amino acids. AK catalyzes the phosphorylation of Asp to P-aspartyl phosphate. HSDH catalyzes the NADPH-dependent conversion of Asp 3-semialdehyde to homoserine. ThrA and MetL are involved in threonine and methionine biosynthesis, respectively. In E. coli, ThrA is subject to allosteric regulation by the end product L-threonine and the native enzyme is reported to be tetrameric. As with bacteria, plant AK and HSDH are feedback inhibited by pathway end products. Maize AK-HSDH is a Thr-sensitive 180-kD enzyme. Arabidopsis AK-HSDH is an alanine-act
Probab=99.90 E-value=1.7e-22 Score=207.36 Aligned_cols=233 Identities=19% Similarity=0.256 Sum_probs=168.0
Q ss_pred EEEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcCCC---cc----c-------
Q 006484 17 LVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSS---LA----D------- 82 (643)
Q Consensus 17 iVIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~~~---~~----~------- 82 (643)
.|.||||+++.+.+ .+.++++.|.... .+.++|+|.|+.+.+++.++........+ .. .
T Consensus 2 ~V~KFGGtSv~~~~------~i~~v~~iI~~~~-~~~~~vvVvSA~~gvTd~L~~~~~~~~~~~~~~~~~l~~i~~~h~~ 74 (294)
T cd04257 2 KVLKFGGTSLANAE------RIRRVADIILNAA-KQEQVAVVVSAPGKVTDLLLELAELASSGDDAYEDILQELESKHLD 74 (294)
T ss_pred EEEEeCccccCCHH------HHHHHHHHHHhhc-cCCCEEEEEcCCCCcHHHHHHHHHHHhcCChhHHHHHHHHHHHHHH
Confidence 59999999998743 5788888887654 46789999999888998775543311100 00 0
Q ss_pred ----c-cCc-c---------------------------cchhHHHHHHhchHHHHHHHHHHhccCCCCcc-----eeEec
Q 006484 83 ----L-QKP-Q---------------------------NELDGKACAAVGQSSLMALYDTLFSQLDVTSS-----QLLVT 124 (643)
Q Consensus 83 ----l-~~~-~---------------------------~~l~~~~~~a~G~~~~~~~~~~~l~~~g~~~~-----~~~~t 124 (643)
+ ... + .......+.+.|+..+..++...|+..|+++. ++++|
T Consensus 75 ~~~~l~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~~d~ils~GE~lSa~lla~~L~~~Gi~a~~ld~~~~i~t 154 (294)
T cd04257 75 LITELLSGDAAAELLSALGNDLEELKDLLEGIYLLGELPDSIRAKVLSFGERLSARLLSALLNQQGLDAAWIDARELIVT 154 (294)
T ss_pred HHHHhhcchhhHHHHHHHHHHHHHHHHHHHHHHhhccCChhHhhhheeHHHHHHHHHHHHHHHhCCCCeEEEchHHeeEe
Confidence 0 000 0 00112356688988888888899999998764 34566
Q ss_pred ccccCcchhhc-hHHHHHHHHHhC-CCeeEecCCCceeccCCCCCCCCce--e--ecchhHHHHHHhhcCCCEEEEeccC
Q 006484 125 DSDFRDEDFRK-QLYDTVQSLLDL-RVIPIFNENDAVSTRKAPYEDSSGI--F--WDNDSLAGLLALELKADLLVLLSDV 198 (643)
Q Consensus 125 ~~~~~~~~~~~-~~~~~i~~ll~~-g~iPVv~g~d~v~~~~~~~~~~~~~--~--~~~D~~A~~lA~~L~Ad~li~lTdV 198 (643)
++++.+..... ...+.++.++.. +.|||+.|+-+... .|.. + ++||++|+.+|..|+|+.++++|||
T Consensus 155 ~~~~~~a~~~~~~~~~~l~~~~~~~~~v~Vv~Gfig~~~-------~G~~ttlGRGGSD~~A~~lA~~l~a~~l~i~tdV 227 (294)
T cd04257 155 DGGYLNAVVDIELSKERIKAWFSSNGKVIVVTGFIASNP-------QGETTTLGRNGSDYSAAILAALLDADQVEIWTDV 227 (294)
T ss_pred cCCCCceEechHhhHHHHHHHHhcCCCEEEecCcccCCC-------CCCEEECCCCchHHHHHHHHHHhCCCEEEEEeCC
Confidence 66655433321 225677777777 89999998544222 2332 2 8899999999999999999999999
Q ss_pred CccccCCCC-CCCccceeeeecccchhHHhcCCCCCccCCCchHHHHHHHHHHHcCCcEEEEeCCCcchHHHHHcCCcee
Q 006484 199 EGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVG 277 (643)
Q Consensus 199 dGVy~~~P~-~p~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gv~v~I~~g~~~~~l~~~~~g~~~G 277 (643)
||||+.||+ +|++++|++|+++|+.++...| +.-+ +.++...+.++|+|++|.|+++|+ ..|
T Consensus 228 dGvyt~DP~~~~~A~~i~~is~~ea~~l~~~G------akv~--h~~~~~~a~~~~Ipi~i~~~~~p~---------~~G 290 (294)
T cd04257 228 DGVYSADPRKVKDARLLPSLSYQEAMELSYFG------AKVL--HPKTIQPVAKKNIPILIKNTFNPE---------APG 290 (294)
T ss_pred CccCCCCCCCCCCCeEeceeCHHHHHHHHhCC------Cccc--CHHHHHHHHHCCCCEEEeeCCCCC---------CCC
Confidence 999999996 8999999999999999865544 3333 446888999999999999999875 458
Q ss_pred eEE
Q 006484 278 TLF 280 (643)
Q Consensus 278 T~i 280 (643)
|+|
T Consensus 291 T~I 293 (294)
T cd04257 291 TLI 293 (294)
T ss_pred CEe
Confidence 876
No 201
>TIGR02078 AspKin_pair Pyrococcus aspartate kinase subunit, putative. This family consists of proteins restricted to and found as paralogous pairs (typically close together) in species of Pyrococcus, a hyperthermophilic archaeal genus. Members are always found close to other genes of threonine biosynthesis and appear to represent the Pyrococcal form of aspartate kinase. Alignment to aspartokinase III from E. coli shows that 300 N-terminal and 20 C-terminal amino acids are homologous, but the form in Pyrococcus lacks ~ 100 amino acids in between.
Probab=99.89 E-value=6e-23 Score=212.16 Aligned_cols=232 Identities=22% Similarity=0.276 Sum_probs=163.6
Q ss_pred eEEEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcC--------CCccc----c
Q 006484 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVN--------SSLAD----L 83 (643)
Q Consensus 16 ~iVIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~--------~~~~~----l 83 (643)
++|+||||+++.+. ++.+++.|....+ +.++++|.|+...+++.++....... ..+.+ +
T Consensus 1 m~V~KFGGsSv~~~--------~~~v~~ii~~~~~-~~~~vVVVSA~~gvTd~L~~~~~~~~~~~l~~i~~~h~~~~~~L 71 (327)
T TIGR02078 1 MIVVKFGGSSVRYA--------FEEALELVKSLSE-EKRVIVVVSALKGITDCLIRYANTFDKSAALEIEEIYEEFAKEL 71 (327)
T ss_pred CEEEEECCcchHHH--------HHHHHHHHHHHhc-CCCEEEEeCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 37999999999852 6777777775543 67899999998888887655432211 00000 0
Q ss_pred cC---------------cc--cchhHHHHHHhchHHHHHHHHHHhccCCCCcceeEecccccCcchh----hchHHHHHH
Q 006484 84 QK---------------PQ--NELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDF----RKQLYDTVQ 142 (643)
Q Consensus 84 ~~---------------~~--~~l~~~~~~a~G~~~~~~~~~~~l~~~g~~~~~~~~t~~~~~~~~~----~~~~~~~i~ 142 (643)
.. .. ..-....+.+.|+..+..++...+....+.+.+++.++++|.+... ...+.+.+.
T Consensus 72 ~~~~~~~~~~l~~~~~~~~l~~~~~~d~I~s~GE~lSa~Lla~gi~a~~vd~~~~i~t~~~~~~a~~~~~~~~~~~~~l~ 151 (327)
T TIGR02078 72 GVDLNILSPYLKELFNPPDLPKEALRDYILSLGERLSAVIFAEGINGKVVDPWDIFFAKGDFGNAFIDIKKSKRNAKILY 151 (327)
T ss_pred ccchhhhHHHHHHHHhhhccCChHHHHHHHHHHHHHHHHHHHccCCcEEEcHHHHhccCCcCCceeechhhhHhhHHHHH
Confidence 00 00 0012246778888766655555555555555666677666554322 123457788
Q ss_pred HHHhCCCeeEecCCCceeccCCCCCCCCce--e--ecchhHHHHHHhhcCCCEEEEeccCCccccCCCC-CCCccceeee
Q 006484 143 SLLDLRVIPIFNENDAVSTRKAPYEDSSGI--F--WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EPNSKLIHTY 217 (643)
Q Consensus 143 ~ll~~g~iPVv~g~d~v~~~~~~~~~~~~~--~--~~~D~~A~~lA~~L~Ad~li~lTdVdGVy~~~P~-~p~a~~i~~i 217 (643)
.+++.|.|||++|+-+ . .+|.. + +++|++|+.+|.+|+|+.++++|||||||++||+ +|++++|+++
T Consensus 152 ~~l~~g~IpVv~Gf~~--~------~~G~~ttlGRGgSD~~Aa~lA~~L~A~~v~i~TDVdGVytaDP~~v~~A~~i~~l 223 (327)
T TIGR02078 152 EVLESGKIPVIPGFYG--N------LNGYRVTLGRGGSDYSAVALGVLLNSKLVAIMSDVEGIFTADPKLVPSARLIPYL 223 (327)
T ss_pred HHHhCCcEEEEeCCcc--C------CCCeEEEcCCCChHHHHHHHHHhcCCCEEEEEECCCccCCCCCCcCCCceEcccc
Confidence 9999999999988432 1 12322 2 6899999999999999999999999999999996 8999999999
Q ss_pred ecccchhHHhcCCCCCccCCCch-HHHHHHHHHHHcCCcEEEEeCCCcchHHHHHcCCceeeEEecC
Q 006484 218 IRAKHQAEITFGDKSRVGRGGMT-AKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 283 (643)
Q Consensus 218 ~~~e~~~~~~~g~~~~~~~ggM~-~Kl~aa~~a~~~gv~v~I~~g~~~~~l~~~~~g~~~GT~i~~~ 283 (643)
+++|+.++. ..||. .|++++..+.++|+|++|.|.+.|+ .||+|...
T Consensus 224 sy~Ea~ela---------~~Gakvlhp~a~~~a~~~~Ipi~I~~t~~~~----------~GT~I~~~ 271 (327)
T TIGR02078 224 SYEEIKIAA---------KLGMKALQWKAADLAKEYKIPVLFGRTRDWR----------MGTLISNR 271 (327)
T ss_pred CHHHHHHHH---------HCCchhhHHHHHHHHHHCCCeEEEEeCCCcC----------CCcEEecC
Confidence 999987532 23663 7889999999999999999987652 48888654
No 202
>PRK06291 aspartate kinase; Provisional
Probab=99.89 E-value=1.8e-22 Score=221.59 Aligned_cols=238 Identities=23% Similarity=0.314 Sum_probs=176.6
Q ss_pred eEEEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcCC--C---ccc--------
Q 006484 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNS--S---LAD-------- 82 (643)
Q Consensus 16 ~iVIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~~--~---~~~-------- 82 (643)
++|.||||+++.+.+ .++++++.|...+..|+++|+|.|+.+.++..++...+.... + +..
T Consensus 2 ~~V~KFGGtSv~~~~------~~~~v~~ii~~~~~~~~~~vvVvSA~~~~Td~L~~~~~~~~~~~~~~~~~~~~~~i~~~ 75 (465)
T PRK06291 2 RLVMKFGGTSVGDGE------RIRHVAKLVKRYRSEGNEVVVVVSAMTGVTDALLEIAEQALDVRDIAKVKDFIADLRER 75 (465)
T ss_pred cEEEEeCcccCCCHH------HHHHHHHHHHHHHhcCCCEEEEEcCCCCCHHHHHHHHHHHHhccchhhHHHHHHHHHHH
Confidence 479999999999743 688888888876667889999999988888877554322100 0 000
Q ss_pred -------c-cCc----------------------------c-cchhHHHHHHhchHHHHHHHHHHhccCCCCccee----
Q 006484 83 -------L-QKP----------------------------Q-NELDGKACAAVGQSSLMALYDTLFSQLDVTSSQL---- 121 (643)
Q Consensus 83 -------l-~~~----------------------------~-~~l~~~~~~a~G~~~~~~~~~~~l~~~g~~~~~~---- 121 (643)
+ ... + ..-....+.+.|+..+..++...|+..|+++..+
T Consensus 76 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~i~s~GE~~Sa~l~~~~L~~~Gi~a~~l~~~~ 155 (465)
T PRK06291 76 HYKAIEEAIKDPDIREEVSKTIDSRIEELEKALVGVSYLGELTPRSRDYILSFGERLSAPILSGALRDLGIKSVALTGGE 155 (465)
T ss_pred HHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHHHHHhccCChHHHHHHHhhhHHHHHHHHHHHHHhCCCCeEEEchHH
Confidence 0 000 0 0001245778899888778889999999876533
Q ss_pred --EecccccCcchh----hchHHHHHHHHHhCCCeeEecCCCceeccCCCCCCCCce----eecchhHHHHHHhhcCCCE
Q 006484 122 --LVTDSDFRDEDF----RKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI----FWDNDSLAGLLALELKADL 191 (643)
Q Consensus 122 --~~t~~~~~~~~~----~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~~~~~----~~~~D~~A~~lA~~L~Ad~ 191 (643)
+++.++|.+.+. +....+.++.+++.|.|||++|+-+... .|.. ++++|++|+.+|.+|+|++
T Consensus 156 ~~i~t~~~~~~~~~~~~~~~~~~~~~~~ll~~~~vpVv~Gfig~~~-------~g~~~tlgrggsD~~A~~~A~~l~a~~ 228 (465)
T PRK06291 156 AGIITDSNFGNARPLPKTYERVKERLEPLLKEGVIPVVTGFIGETE-------EGIITTLGRGGSDYSAAIIGAALDADE 228 (465)
T ss_pred CcEEecCCCCceeechhhHHHHHHHHHHHhhcCcEEEEeCcEEcCC-------CCCEEEecCCChHHHHHHHHHhcCCCE
Confidence 455555544332 2333467888999999999987432211 2322 2699999999999999999
Q ss_pred EEEeccCCccccCCCC-CCCccceeeeecccchhHHhcCCCCCccCCCchHHHHHHHHHHHcCCcEEEEeCCCcchHHHH
Q 006484 192 LVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKV 270 (643)
Q Consensus 192 li~lTdVdGVy~~~P~-~p~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gv~v~I~~g~~~~~l~~~ 270 (643)
|+++|||||||+.||+ +|++++|++|+++|+.++.. .|.+..|++++..+.++|+|++|.|++.|+
T Consensus 229 ~~i~tdV~Gi~~~dP~~~~~a~~i~~l~~~ea~~l~~--------~G~~v~~~~a~~~~~~~~i~i~i~~~~~~~----- 295 (465)
T PRK06291 229 IWIWTDVDGVMTTDPRIVPEARVIPKISYIEAMELSY--------FGAKVLHPRTIEPAMEKGIPVRVKNTFNPE----- 295 (465)
T ss_pred EEEEECCCCCCCCCCCCCCCCeEccccCHHHHHHHHh--------CCCcccCHHHHHHHHHcCCcEEEecCCCCC-----
Confidence 9999999999999995 89999999999999987654 356788999999999999999999998874
Q ss_pred HcCCceeeEEecC
Q 006484 271 LEGKRVGTLFHRD 283 (643)
Q Consensus 271 ~~g~~~GT~i~~~ 283 (643)
..||+|...
T Consensus 296 ----~~gt~i~~~ 304 (465)
T PRK06291 296 ----FPGTLITSD 304 (465)
T ss_pred ----CCceEEEec
Confidence 469998764
No 203
>cd04243 AAK_AK-HSDH-like AAK_AK-HSDH-like: Amino Acid Kinase Superfamily (AAK), AK-HSDH-like; this family includes the N-terminal catalytic domain of aspartokinase (AK) of the bifunctional enzyme AK- homoserine dehydrogenase (HSDH). These aspartokinases are found in such bacteria as E. coli (AKI-HSDHI, ThrA and AKII-HSDHII, MetL) and in higher plants (Z. mays AK-HSDH). AK and HSDH are the first and third enzymes in the biosynthetic pathway of the aspartate family of amino acids. AK catalyzes the phosphorylation of Asp to P-aspartyl phosphate. HSDH catalyzes the NADPH-dependent conversion of Asp 3-semialdehyde to homoserine. ThrA and MetL are involved in threonine and methionine biosynthesis, respectively. In E. coli, ThrA is subject to allosteric regulation by the end product L-threonine and the native enzyme is reported to be tetrameric. As with bacteria, plant AK and HSDH are feedback inhibited by pathway end products. Maize AK-HSDH is a Thr-sensitive 180-kD enzyme. Arabidopsis AK-
Probab=99.89 E-value=2.6e-22 Score=205.78 Aligned_cols=232 Identities=20% Similarity=0.271 Sum_probs=166.4
Q ss_pred EEEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcCCC---c----cc-------
Q 006484 17 LVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSS---L----AD------- 82 (643)
Q Consensus 17 iVIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~~~---~----~~------- 82 (643)
.|.||||+++.+. +.+..+++.|..-. +.++++|.|+...+++.++......... . ..
T Consensus 2 ~V~KFGGtSv~~~------~~i~~v~~iI~~~~--~~~~vvVvSA~~gvTd~L~~~~~~a~~~~~~~~~~l~~i~~~h~~ 73 (293)
T cd04243 2 KVLKFGGTSVASA------ERIRRVADIIKSRA--SSPVLVVVSALGGVTNRLVALAELAASGDDAQAIVLQEIRERHLD 73 (293)
T ss_pred EEEEECccccCCH------HHHHHHHHHHHHhc--CCCEEEEEcCCCCcHHHHHHHHHHHhcCChhHHHHHHHHHHHHHH
Confidence 6999999999974 35777777775442 7799999999888888765543221100 0 00
Q ss_pred ----c--cCc----c-----------------------cchhHHHHHHhchHHHHHHHHHHhccCCCCcce-----eEec
Q 006484 83 ----L--QKP----Q-----------------------NELDGKACAAVGQSSLMALYDTLFSQLDVTSSQ-----LLVT 124 (643)
Q Consensus 83 ----l--~~~----~-----------------------~~l~~~~~~a~G~~~~~~~~~~~l~~~g~~~~~-----~~~t 124 (643)
+ ... . ..-....+.+.|+..+..++...|+..|+++.. ++.+
T Consensus 74 ~~~~L~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~s~~~~d~ils~GE~lSa~lla~~L~~~Gi~a~~ld~~~~i~t 153 (293)
T cd04243 74 LIKELLSGESAAELLAALDSLLERLKDLLEGIRLLGELSDKTRAEVLSFGELLSSRLMSAYLQEQGLPAAWLDARELLLT 153 (293)
T ss_pred HHHHhhcchhhHHHHHHHHHHHHHHHHHHHhhhhhccCCchhhhHheeHHHHHHHHHHHHHHHhCCCCcEEEcHHHeEEe
Confidence 0 000 0 001123566889888888888999999987653 3455
Q ss_pred ccccCcchhhch-HHHHHHHHHhC-CCeeEecCCCceeccCCCCCCCCce--e--ecchhHHHHHHhhcCCCEEEEeccC
Q 006484 125 DSDFRDEDFRKQ-LYDTVQSLLDL-RVIPIFNENDAVSTRKAPYEDSSGI--F--WDNDSLAGLLALELKADLLVLLSDV 198 (643)
Q Consensus 125 ~~~~~~~~~~~~-~~~~i~~ll~~-g~iPVv~g~d~v~~~~~~~~~~~~~--~--~~~D~~A~~lA~~L~Ad~li~lTdV 198 (643)
.+++.+...... ..+.++.++.. +.|||+.|+-+... .|.. + +++|++|+.+|.+|+|++++++|||
T Consensus 154 ~~~~~~~~~~~~~s~~~~~~~~~~~~~v~Vv~Gfig~~~-------~G~~ttLGRggsD~~A~~~a~~l~a~~~~i~tdv 226 (293)
T cd04243 154 DDGFLNAVVDLKLSKERLAQLLAEHGKVVVTQGFIASNE-------DGETTTLGRGGSDYSAALLAALLDAEEVEIWTDV 226 (293)
T ss_pred cCCCCcchhhhHHHHHHHHHHHhcCCCEEEecCccccCC-------CCCEEEeCCCCcHHHHHHHHHHcCCCEEEEEeCC
Confidence 555543322111 14578888887 89999998543221 2332 3 7899999999999999999999999
Q ss_pred CccccCCCC-CCCccceeeeecccchhHHhcCCCCCccCCCchHHHHHHHHHHHcCCcEEEEeCCCcchHHHHHcCCcee
Q 006484 199 EGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVG 277 (643)
Q Consensus 199 dGVy~~~P~-~p~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gv~v~I~~g~~~~~l~~~~~g~~~G 277 (643)
||||+.||+ +|++++|++|+++|+.++...| ..-+ +.++...+.++|+|++|.|++.|+ ..|
T Consensus 227 dGiyt~dP~~~~~a~~i~~ls~~ea~~l~~~G------akvl--~p~ai~~a~~~~i~i~i~~~~~p~---------~~G 289 (293)
T cd04243 227 DGVYTADPRKVPDARLLKELSYDEAMELAYFG------AKVL--HPRTIQPAIRKNIPIFIKNTFNPE---------APG 289 (293)
T ss_pred CccCCCCCCCCCCCeEeceeCHHHHHHHHhCC------Cccc--CHHHHHHHHHCCCcEEEecCCCCC---------CCC
Confidence 999999996 8999999999999999876654 2333 456888999999999999999875 458
Q ss_pred eEE
Q 006484 278 TLF 280 (643)
Q Consensus 278 T~i 280 (643)
|+|
T Consensus 290 T~I 292 (293)
T cd04243 290 TLI 292 (293)
T ss_pred CEe
Confidence 876
No 204
>PRK09084 aspartate kinase III; Validated
Probab=99.88 E-value=3.6e-22 Score=217.50 Aligned_cols=234 Identities=20% Similarity=0.214 Sum_probs=172.0
Q ss_pred eEEEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcCCC--ccc-----------
Q 006484 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSS--LAD----------- 82 (643)
Q Consensus 16 ~iVIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~~~--~~~----------- 82 (643)
++|.||||+++.+.+ +++++++.|+. .+.++|+|.|+.+.++..++...+....+ +..
T Consensus 1 m~V~KFGGtSv~~~e------~i~~v~~ii~~---~~~~~vvVVSA~~~~Td~L~~~~~~~~~~~~~~~~~~~i~~~h~~ 71 (448)
T PRK09084 1 LVVAKFGGTSVADFD------AMNRSADIVLS---NPNTRLVVLSASAGVTNLLVALAEGAEPGDERLALLDEIRQIQYA 71 (448)
T ss_pred CEEEEECccCcCCHH------HHHHHHHHHhc---CCCCEEEEEcCCCCchHHHHHHHHHHHcCccHHHHHHHHHHHHHH
Confidence 479999999999743 57788887764 57899999999988998775543322110 000
Q ss_pred ----ccCc------------------------ccchhHHHHHHhchHHHHHHHHHHhccCCCCc-----ceeEecccccC
Q 006484 83 ----LQKP------------------------QNELDGKACAAVGQSSLMALYDTLFSQLDVTS-----SQLLVTDSDFR 129 (643)
Q Consensus 83 ----l~~~------------------------~~~l~~~~~~a~G~~~~~~~~~~~l~~~g~~~-----~~~~~t~~~~~ 129 (643)
+... ........+.+.|+..+..++...|...|+++ +++++|+++|.
T Consensus 72 ~~~~l~~~~~~~~~i~~~~~~l~~l~~~~~~~~~~~~~d~i~s~GE~lSa~l~~~~L~~~Gi~a~~l~~~~~i~t~~~~~ 151 (448)
T PRK09084 72 ILDRLGDPNVVREEIERLLENITVLAEAASLATSPALTDELVSHGELMSTLLFVELLRERGVQAEWFDVRKVMRTDDRFG 151 (448)
T ss_pred HHHHhccchHHHHHHHHHHHHHHHHHHhhhhcCChhhhhhhhhHHHHHHHHHHHHHHHhCCCCcEEEchHHeEEecCCCC
Confidence 0000 00112346778999888888999999999874 46677777766
Q ss_pred cchhh-----chHHHHHHHHHhCCCeeEecCCCceeccCCCCCCCCce--e--ecchhHHHHHHhhcCCCEEEEeccCCc
Q 006484 130 DEDFR-----KQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI--F--WDNDSLAGLLALELKADLLVLLSDVEG 200 (643)
Q Consensus 130 ~~~~~-----~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~~~~~--~--~~~D~~A~~lA~~L~Ad~li~lTdVdG 200 (643)
+.... ....+.+..+++.+ |||+.|+-+... .|.. + +++|++|+.+|..|+|+.++++|||||
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~-v~Vv~Gf~g~~~-------~G~~ttLgRggSD~~a~~~a~~l~a~~~~i~tdv~G 223 (448)
T PRK09084 152 RAEPDVAALAELAQEQLLPLLAEG-VVVTQGFIGSDE-------KGRTTTLGRGGSDYSAALLAEALNASRVEIWTDVPG 223 (448)
T ss_pred cccccHHHHHHHHHHHHHHhhcCC-cEEecCeeecCC-------CCCEeecCCCchHHHHHHHHHHcCCCEEEEEECCCc
Confidence 54221 12235566778888 999999655433 2222 3 899999999999999999999999999
Q ss_pred cccCCCC-CCCccceeeeecccchhHHhcCCCCCccCCCchHHHHHHHHHHHcCCcEEEEeCCCcchHHHHHcCCceeeE
Q 006484 201 LYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTL 279 (643)
Q Consensus 201 Vy~~~P~-~p~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gv~v~I~~g~~~~~l~~~~~g~~~GT~ 279 (643)
||+.||+ +|++++|++|+++|+.++...|++ .-+..+...+.+.++|++|.|+++|+ ..||+
T Consensus 224 i~t~dP~~~~~a~~i~~is~~ea~ela~~Ga~--------vlh~~~~~~~~~~~i~i~i~~~~~~~---------~~GT~ 286 (448)
T PRK09084 224 IYTTDPRIVPAAKRIDEISFEEAAEMATFGAK--------VLHPATLLPAVRSNIPVFVGSSKDPE---------AGGTW 286 (448)
T ss_pred cccCCCCCCCCCeEcccCCHHHHHHHHhCCCc--------ccCHHHHHHHHHcCCcEEEEeCCCCC---------CCceE
Confidence 9999996 899999999999999986655432 23456888899999999999998874 46998
Q ss_pred EecC
Q 006484 280 FHRD 283 (643)
Q Consensus 280 i~~~ 283 (643)
|...
T Consensus 287 I~~~ 290 (448)
T PRK09084 287 ICND 290 (448)
T ss_pred EecC
Confidence 8754
No 205
>PRK05925 aspartate kinase; Provisional
Probab=99.87 E-value=2e-21 Score=209.78 Aligned_cols=235 Identities=20% Similarity=0.198 Sum_probs=165.8
Q ss_pred ceEEEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcCCC----cc-------c-
Q 006484 15 KRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSS----LA-------D- 82 (643)
Q Consensus 15 ~~iVIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~~~----~~-------~- 82 (643)
.++|.||||+++.+.+ ++.++++.|.. ..++++|.|+.+.+++.+....+..... +. .
T Consensus 2 ~~~V~KFGGtSv~~~e------~i~~v~~ii~~----~~~~vVVvSA~~~~Td~L~~~~~~a~~~~~~~~~~i~~~~~~~ 71 (440)
T PRK05925 2 APLVYKFGGTSLGTAE------SIRRVCDIICK----EKPSFVVVSAVAGVTDLLEEFCRLSKGKREALTEKIREKHEEI 71 (440)
T ss_pred CcEEEEECccccCCHH------HHHHHHHHHhc----CCCEEEEECCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 5789999999999743 56777776653 2578999999888888765433210000 00 0
Q ss_pred ---ccC-----------------cc-cchhHHHHHHhchHHHHHHHHHHhccCCCCc-----ceeEecccccCcchh--h
Q 006484 83 ---LQK-----------------PQ-NELDGKACAAVGQSSLMALYDTLFSQLDVTS-----SQLLVTDSDFRDEDF--R 134 (643)
Q Consensus 83 ---l~~-----------------~~-~~l~~~~~~a~G~~~~~~~~~~~l~~~g~~~-----~~~~~t~~~~~~~~~--~ 134 (643)
+.. .. .......+.+.|+..+..++...|+..|+++ .++++|+++|.+... .
T Consensus 72 ~~~l~~~~~~~~~~~~L~~~~~~~~~~~~~~d~i~s~GE~~Sa~l~a~~L~~~Gi~a~~ld~~~~i~t~~~~~~a~~~~~ 151 (440)
T PRK05925 72 AKELGIEFSLSPWWERLEHFEDVEEISSEDQARILAIGEDISASLICAYCCTYVLPLEFLEARQVILTDDQYLRAVPDLA 151 (440)
T ss_pred HHHhhcchhhhHHHHHHHHHHHhCcCCchhhhhheehhHHHHHHHHHHHHHhCCCCeEEEcHHHhEeecCCccccccCHH
Confidence 000 00 0112246778899888888899999999864 455677766654332 1
Q ss_pred chHHHHHHHHHhCCCeeEecCCCceeccCCCCCCCCce----eecchhHHHHHHhhcCCCEEEEeccCCccccCCCC-CC
Q 006484 135 KQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI----FWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-EP 209 (643)
Q Consensus 135 ~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~~~~~----~~~~D~~A~~lA~~L~Ad~li~lTdVdGVy~~~P~-~p 209 (643)
..........++.+.|||+.|+-+... .|.. ++++|++|+.+|.+|+||.++++|||||||+.||+ +|
T Consensus 152 ~~~~~~~~~~~~~~~v~Vv~GF~g~~~-------~G~~ttLgrGgsD~~AallA~~l~Ad~~~i~TdVdGvytaDP~~~~ 224 (440)
T PRK05925 152 LMQTAWHELALQEDAIYIMQGFIGANS-------SGKTTVLGRGGSDFSASLIAELCKAREVRIYTDVNGIYTMDPKIIK 224 (440)
T ss_pred HHHHHHHHhhccCCcEEEecCcceeCC-------CCCEEEeccCcHHHHHHHHHHHcCCCEEEEEEcCCccCCCCcCCCC
Confidence 112223333456778999999654443 2322 39999999999999999999999999999999996 89
Q ss_pred CccceeeeecccchhHHhcCCCCCccCCCchHHHHHHHHHHHcCCcEEEEeCCCcchHHHHHcCCceeeEEecC
Q 006484 210 NSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 283 (643)
Q Consensus 210 ~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gv~v~I~~g~~~~~l~~~~~g~~~GT~i~~~ 283 (643)
++++|++|+++|+.++...|++ ...++ +...+.+.|+|++|.|+++|+ ..||+|.+.
T Consensus 225 ~A~~i~~is~~ea~ela~~Ga~--vl~~~------~~~~a~~~~Ipi~I~~~~~p~---------~~GT~i~~~ 281 (440)
T PRK05925 225 DAQLIPELSFEEMQNLASFGAK--VLHPP------MLKPCVRAGIPIFVTSTFDVT---------KGGTWIYAS 281 (440)
T ss_pred CCeEeeEECHHHHHHHHhCCCC--cCCHH------HHHHHHHCCCcEEEecCCCCC---------CCccEEecC
Confidence 9999999999999876554432 44443 357899999999999999885 369999764
No 206
>cd04258 AAK_AKiii-LysC-EC AAK_AKiii-LysC-EC: Amino Acid Kinase Superfamily (AAK), AKiii-LysC-EC: this CD includes the N-terminal catalytic aspartokinase (AK) domain of the lysine-sensitive aspartokinase isoenzyme AKIII. AKIII is a monofunctional class enzyme (LysC) found in some bacteria such as E. coli. Aspartokinase is the first enzyme in the aspartate metabolic pathway and catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. In E. coli, LysC is reported to be a homodimer of 50 kD subunits.
Probab=99.87 E-value=3.4e-21 Score=196.82 Aligned_cols=231 Identities=20% Similarity=0.195 Sum_probs=162.8
Q ss_pred eEEEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcCCC----cc----cccCc-
Q 006484 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSS----LA----DLQKP- 86 (643)
Q Consensus 16 ~iVIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~~~----~~----~l~~~- 86 (643)
+.|.||||+++.+.+ .+.++++.|.. .+.++|+|.|+.+.++..++........+ +. .+...
T Consensus 1 m~V~KFGGtSv~~~~------~i~~v~~ii~~---~~~~~vVVVSA~~~vTd~L~~~~~~~~~~~~~~~~~~l~~l~~~h 71 (292)
T cd04258 1 MVVAKFGGTSVADYA------AMLRCAAIVKS---DASVRLVVVSASAGVTNLLVALADAAESGEEIESIPQLHEIRAIH 71 (292)
T ss_pred CEEEEECccccCCHH------HHHHHHHHHhc---cCCCEEEEEeCCCCchHHHHHHHHHHhcCCcchhhHHHHHHHHHH
Confidence 379999999999753 56777776653 36789999999888888765543221100 00 00000
Q ss_pred ----------------------------------c--cchhHHHHHHhchHHHHHHHHHHhccCCCCcc-----eeEecc
Q 006484 87 ----------------------------------Q--NELDGKACAAVGQSSLMALYDTLFSQLDVTSS-----QLLVTD 125 (643)
Q Consensus 87 ----------------------------------~--~~l~~~~~~a~G~~~~~~~~~~~l~~~g~~~~-----~~~~t~ 125 (643)
. ..-....+.+.|+..+..++...|+..|+++. ++++|+
T Consensus 72 ~~~~~~L~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~d~i~s~GE~lSa~lla~~L~~~Gi~a~~ld~~~~i~t~ 151 (292)
T cd04258 72 FAILNRLGAPEELRAKLEELLEELTQLAEGAALLGELSPASRDELLSFGERMSSLLFSEALREQGVPAEWFDVRTVLRTD 151 (292)
T ss_pred HHHHHHhhcchhHHHHHHHHHHHHHHHHhhhccccccChHhHhHhhhHHHHHHHHHHHHHHHhCCCCeEEEchHHeEEec
Confidence 0 00012467788988887788899999998754 445666
Q ss_pred cccCcchhhc-----hHHHHHHHHHhCCCeeEecCCCceeccCCCCCCCCce----eecchhHHHHHHhhcCCCEEEEec
Q 006484 126 SDFRDEDFRK-----QLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI----FWDNDSLAGLLALELKADLLVLLS 196 (643)
Q Consensus 126 ~~~~~~~~~~-----~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~~~~~----~~~~D~~A~~lA~~L~Ad~li~lT 196 (643)
++|.+..... .....++.+ ..+.|||+.|+-+... .|.. ++++|++|+.+|..|+|+.++++|
T Consensus 152 ~~~~~a~~~~~~~~~~~~~~~~~~-~~~~v~Vv~Gf~g~~~-------~G~~ttLGrggsD~~a~~~a~~l~a~~~~i~t 223 (292)
T cd04258 152 SRFGRAAPDLNALAELAAKLLKPL-LAGTVVVTQGFIGSTE-------KGRTTTLGRGGSDYSAALLAEALHAEELQIWT 223 (292)
T ss_pred CCCccccccHHHHHHHHHHHHHHh-hcCCEEEECCccccCC-------CCCEEecCCCchHHHHHHHHHHcCCCEEEEEE
Confidence 6665433211 112333333 4668999998543322 2222 389999999999999999999999
Q ss_pred cCCccccCCCC-CCCccceeeeecccchhHHhcCCCCCccCCCchHHHHHHHHHHHcCCcEEEEeCCCcchHHHHHcCCc
Q 006484 197 DVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKR 275 (643)
Q Consensus 197 dVdGVy~~~P~-~p~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gv~v~I~~g~~~~~l~~~~~g~~ 275 (643)
||||||+.||+ +|++++|++|+++|+.++...|+ .-+ ++++...+.+.++|++|.|.++|+ .
T Consensus 224 dv~Gv~~~dP~~~~~a~~i~~isy~Ea~ela~~Ga------kvl--hp~a~~~~~~~~ipi~i~~~~~p~---------~ 286 (292)
T cd04258 224 DVAGIYTTDPRICPAARAIKEISFAEAAEMATFGA------KVL--HPATLLPAIRKNIPVFVGSSKDPE---------A 286 (292)
T ss_pred CCCccCCCCCCCCCCCeEeceeCHHHHHHHHHCCC------ccc--CHHHHHHHHHcCCcEEEEeCCCCC---------C
Confidence 99999999996 89999999999999998766553 223 557888999999999999988874 4
Q ss_pred eeeEE
Q 006484 276 VGTLF 280 (643)
Q Consensus 276 ~GT~i 280 (643)
.||+|
T Consensus 287 ~GT~I 291 (292)
T cd04258 287 GGTLI 291 (292)
T ss_pred CCcee
Confidence 58876
No 207
>PRK09034 aspartate kinase; Reviewed
Probab=99.86 E-value=8.5e-21 Score=207.33 Aligned_cols=234 Identities=22% Similarity=0.240 Sum_probs=167.8
Q ss_pred EEEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhH-------hhHHHhhhhhhcCCC--ccc-----
Q 006484 17 LVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVG-------VGRQRLRYRKLVNSS--LAD----- 82 (643)
Q Consensus 17 iVIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~-------i~~~~~~~~~~~~~~--~~~----- 82 (643)
+|.||||+++.+.+ .++++++.|. +.+.++|+|+|+.+. ++..++...+....+ +..
T Consensus 2 ~V~KFGGtSv~~~~------~i~~v~~ii~---~~~~~~vvVVSA~~~~~~~~~~~Td~L~~~~~~~~~~~~~~~~~~~~ 72 (454)
T PRK09034 2 KVVKFGGSSLASAE------QFKKVLNIVK---SDPERKIVVVSAPGKRFKEDTKVTDLLILYAEAVLAGEDYEDIFEAI 72 (454)
T ss_pred EEEEeCccccCCHH------HHHHHHHHHh---ccCCCEEEEEcCCcCCCCCccChHHHHHHHHHHHhcCCcHHHHHHHH
Confidence 69999999998743 5677777665 346789999998753 676664433211100 000
Q ss_pred ----------c-----------------c---CcccchhHHHHHHhchHHHHHHHHHHhccCCCCcc-----ee-Eeccc
Q 006484 83 ----------L-----------------Q---KPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSS-----QL-LVTDS 126 (643)
Q Consensus 83 ----------l-----------------~---~~~~~l~~~~~~a~G~~~~~~~~~~~l~~~g~~~~-----~~-~~t~~ 126 (643)
+ . ..........+.+.|+..+..++...|+..|+++. ++ ++|++
T Consensus 73 ~~~~~~~~~~L~~~~~~~~~~~~~l~~l~~~~~~~~~~~~d~l~s~GE~~S~~l~a~~L~~~g~~a~~~~~~~~~~~t~~ 152 (454)
T PRK09034 73 IARYAEIAKELGLDADILEKIEEILEHLANLASRNPDRLLDAFKARGEDLNAKLIAAYLNYEGIPARYVDPKEAGIIVTD 152 (454)
T ss_pred HHHHHHHHHHhccchHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEchHHceEEecC
Confidence 0 0 00000112467789998888888999999998764 33 55666
Q ss_pred ccCcchhhchHHHHHHHHHhCCCeeEecCCCceeccCCCCCCCCce--e--ecchhHHHHHHhhcCCCEEEEeccCCccc
Q 006484 127 DFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI--F--WDNDSLAGLLALELKADLLVLLSDVEGLY 202 (643)
Q Consensus 127 ~~~~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~~~~~--~--~~~D~~A~~lA~~L~Ad~li~lTdVdGVy 202 (643)
++.+........+.+..++..+.|||+.|+-+... .|.. + +++|++|+.+|.+|+|+.+.++|||||||
T Consensus 153 ~~~~a~i~~~~~~~~~~~~~~~~v~Vv~GFig~~~-------~g~~ttlgRggSD~tA~~la~~l~A~~~~i~tdV~Gi~ 225 (454)
T PRK09034 153 EPGNAQVLPESYDNLKKLRDRDEKLVIPGFFGVTK-------DGQIVTFSRGGSDITGAILARGVKADLYENFTDVDGIY 225 (454)
T ss_pred CcCceeEcHhhHHHHHHHHhcCCEEEecCccccCC-------CCCEEecCCCcHHHHHHHHHHHcCCCEEEEEecCCccC
Confidence 66654333334566777777888999999544332 2322 3 99999999999999999999999999999
Q ss_pred cCCCC-CCCccceeeeecccchhHHhcCCCCCccCCCchHHHHHHHHHHHcCCcEEEEeCCCcchHHHHHcCCceeeEEe
Q 006484 203 SGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFH 281 (643)
Q Consensus 203 ~~~P~-~p~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gv~v~I~~g~~~~~l~~~~~g~~~GT~i~ 281 (643)
+.||+ .|+++++++|+++|+.++...| ..-|.| ++...+.++++|++|.|.+.|+ ..||+|.
T Consensus 226 taDPr~v~~A~~l~~lsy~Ea~ela~~G------akvlhp--~ai~~a~~~~Ipi~v~~~~~p~---------~~GT~I~ 288 (454)
T PRK09034 226 AANPRIVKNPKSIKEITYREMRELSYAG------FSVFHD--EALIPAYRGGIPINIKNTNNPE---------DPGTLIV 288 (454)
T ss_pred cCCCCCCCCCeECCccCHHHHHHHHhCC------cccCCH--HHHHHHHHcCCCEEEEcCCCCC---------CCccEEE
Confidence 99996 8999999999999999876554 334544 5888999999999999988773 4599997
Q ss_pred cC
Q 006484 282 RD 283 (643)
Q Consensus 282 ~~ 283 (643)
..
T Consensus 289 ~~ 290 (454)
T PRK09034 289 PD 290 (454)
T ss_pred ec
Confidence 54
No 208
>cd04247 AAK_AK-Hom3 AAK_AK-Hom3: Amino Acid Kinase Superfamily (AAK), AK-Hom3; this CD includes the N-terminal catalytic domain of the aspartokinase HOM3, a monofunctional class enzyme found in Saccharomyces cerevisiae and other related AK domains. Aspartokinase, the first enzyme in the aspartate metabolic pathway, catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP, and in fungi, is responsible for the production of threonine, isoleucine and methionine. S. cerevisiae has a single aspartokinase isoenzyme type, which is regulated by feedback, allosteric inhibition by L-threonine. Recent studies show that the allosteric transition triggered by binding of threonine to AK involves a large change in the conformation of the native hexameric enzyme that is converted to an inactive one of different shape and substantially smaller hydrodynamic size.
Probab=99.86 E-value=9.5e-21 Score=194.32 Aligned_cols=235 Identities=16% Similarity=0.219 Sum_probs=157.5
Q ss_pred eEEEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCChh------HhhHHHhhhhhhcC----CCccc---
Q 006484 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAV------GVGRQRLRYRKLVN----SSLAD--- 82 (643)
Q Consensus 16 ~iVIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~------~i~~~~~~~~~~~~----~~~~~--- 82 (643)
++|.||||+++.+. ...+++.|..-...+.++|+|+|+.+ .++..++....... ..+..
T Consensus 2 ~~V~KFGGtSv~~~--------~~~v~~~i~~~~~~~~~~vVVvSA~~~~~~~~gvTd~L~~~~~~a~~~~~~~~~~~l~ 73 (306)
T cd04247 2 WVVQKFGGTSVGKF--------PDNIADDIVKAYLKGNKVAVVCSARSTGTKAEGTTNRLLQAADEALDAQEKAFHDIVE 73 (306)
T ss_pred CEEEEeCchhhccH--------HHHHHHHHHhhhccCCceEEEEeccccCCCccChHHHHHHHHHHHHhhccccHHHHHH
Confidence 57999999999873 24566555544455778999999875 67776644332110 00000
Q ss_pred ------------c-cCcc-----------------------------cchhHHHHHHhchHHHHHHHHHHhccCCCCcce
Q 006484 83 ------------L-QKPQ-----------------------------NELDGKACAAVGQSSLMALYDTLFSQLDVTSSQ 120 (643)
Q Consensus 83 ------------l-~~~~-----------------------------~~l~~~~~~a~G~~~~~~~~~~~l~~~g~~~~~ 120 (643)
+ .... ..-....+.+.|+..+..++...|++.|+++..
T Consensus 74 ~i~~~h~~~~~~L~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~l~~~~~~~~d~i~s~GE~lSa~l~a~~L~~~Gi~a~~ 153 (306)
T cd04247 74 DIRSDHLAAARKFIKNPELQAELEEEINKECELLRKYLEAAKILSEISPRTKDLVISTGEKLSCRFMAAVLRDRGVDAEY 153 (306)
T ss_pred HHHHHHHHHHHHhccChhhHHHHHHHHHHHHHHHHHHHHHHHhhhhcchHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEE
Confidence 0 0000 000113667889988888889999999987653
Q ss_pred e-----Eeccccc--CcchhhchHHHHH-HHHHh-CCCeeEecCCCceeccCCCCCCCCce--e--ecchhHHHHHHhhc
Q 006484 121 L-----LVTDSDF--RDEDFRKQLYDTV-QSLLD-LRVIPIFNENDAVSTRKAPYEDSSGI--F--WDNDSLAGLLALEL 187 (643)
Q Consensus 121 ~-----~~t~~~~--~~~~~~~~~~~~i-~~ll~-~g~iPVv~g~d~v~~~~~~~~~~~~~--~--~~~D~~A~~lA~~L 187 (643)
+ +.++.+. .+........+.+ ..+.+ .+.|||+.|+-+..+ +|.. + +++|++|+.+|..|
T Consensus 154 ld~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Vv~GFig~~~-------~G~~ttLGRgGsD~~A~~la~~l 226 (306)
T cd04247 154 VDLSHIVDLDFSIEALDQTFYDELAQVLGEKITACENRVPVVTGFFGNVP-------GGLLSQIGRGYTDLCAALCAVGL 226 (306)
T ss_pred EcHHHheecCCCccccccchhHHHHHHHHHHhhccCCceEEeeccEecCC-------CCCeEEeCCCchHHHHHHHHHHc
Confidence 2 3332211 0111111111222 22332 578999998544332 2222 3 99999999999999
Q ss_pred CCCEEEEeccCCccccCCCC-CCCccceeeeecccchhHHhcCCCCCccCCCchHHHHHHHHHHHcCCcEEEEeCCCcch
Q 006484 188 KADLLVLLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDS 266 (643)
Q Consensus 188 ~Ad~li~lTdVdGVy~~~P~-~p~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gv~v~I~~g~~~~~ 266 (643)
+|++++++|||||||+.||+ +|++++|++|+++|+.++..+|++ +-+++++..+.+.+||++|.|.++|+
T Consensus 227 ~a~~v~i~tdVdGvyt~DP~~~~~a~~i~~is~~ea~el~~~Gak--------VlHp~ti~pa~~~~Ipi~i~nt~~P~- 297 (306)
T cd04247 227 NADELQIWKEVDGIFTADPRKVPTARLLPSITPEEAAELTYYGSE--------VIHPFTMEQVIKARIPIRIKNVENPR- 297 (306)
T ss_pred CCCEEEEeecCCeeECCCCCCCCCCeEecccCHHHHHHHHhCcCc--------ccCHHHHHHHHHcCCcEEEecCCCCC-
Confidence 99999999999999999996 899999999999999987665432 34567999999999999999988874
Q ss_pred HHHHHcCCceeeEEec
Q 006484 267 IIKVLEGKRVGTLFHR 282 (643)
Q Consensus 267 l~~~~~g~~~GT~i~~ 282 (643)
..||+|.+
T Consensus 298 --------~~GT~I~~ 305 (306)
T cd04247 298 --------GEGTVIYP 305 (306)
T ss_pred --------CCCcEEcC
Confidence 46998865
No 209
>PLN02551 aspartokinase
Probab=99.86 E-value=1.1e-20 Score=207.56 Aligned_cols=238 Identities=18% Similarity=0.225 Sum_probs=168.8
Q ss_pred cceEEEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcCC------Ccc------
Q 006484 14 VKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNS------SLA------ 81 (643)
Q Consensus 14 ~~~iVIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~~------~~~------ 81 (643)
..++|.||||+++.+. ++++.+++.|... ...++|+|+|+.+.++..++........ .+.
T Consensus 51 ~~~~V~KFGGtSv~~~------e~i~~v~~iI~~~--~~~~~vVVvSA~~~~Td~L~~~~~~a~~~~~~~~~~~~~l~~i 122 (521)
T PLN02551 51 QLTVVMKFGGSSVASA------ERMREVADLILSF--PDERPVVVLSAMGKTTNNLLLAGEKAVSCGVTNVSEIEELSAI 122 (521)
T ss_pred CceEEEEECCCccCCH------HHHHHHHHHHHhc--CCCCEEEEEcCCCCchHHHHHHHHHHhhccccchhhHHHHHHH
Confidence 3467999999999874 3578888877653 2346889999988888876543211000 000
Q ss_pred -----c----c--c-------------------Cc-c-cchhHHHHHHhchHHHHHHHHHHhccCCCCcce-----e-Ee
Q 006484 82 -----D----L--Q-------------------KP-Q-NELDGKACAAVGQSSLMALYDTLFSQLDVTSSQ-----L-LV 123 (643)
Q Consensus 82 -----~----l--~-------------------~~-~-~~l~~~~~~a~G~~~~~~~~~~~l~~~g~~~~~-----~-~~ 123 (643)
+ + . .. + ..-....+.+.|+..+..++...|+..|+++.. + ++
T Consensus 123 ~~~h~~~~~~L~~~~~~~~~~~~~l~~ll~~i~~~~~~~~~~~d~ils~GE~lSa~lla~~L~~~Gi~a~~lda~~~gi~ 202 (521)
T PLN02551 123 RELHLRTADELGVDESVVEKLLDELEQLLKGIAMMKELTPRTRDYLVSFGERMSTRIFAAYLNKIGVKARQYDAFDIGFI 202 (521)
T ss_pred HHHHHHHHHHhhcchHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHhHHHHHHHHHHHHHHHHCCCCcEEechHHcceE
Confidence 0 0 0 00 0 001224678999988888899999999987653 3 56
Q ss_pred cccccCcchhhchHHHHHHHHH-----hCCCeeEecCCCcee-ccCCCCCCCCce--e--ecchhHHHHHHhhcCCCEEE
Q 006484 124 TDSDFRDEDFRKQLYDTVQSLL-----DLRVIPIFNENDAVS-TRKAPYEDSSGI--F--WDNDSLAGLLALELKADLLV 193 (643)
Q Consensus 124 t~~~~~~~~~~~~~~~~i~~ll-----~~g~iPVv~g~d~v~-~~~~~~~~~~~~--~--~~~D~~A~~lA~~L~Ad~li 193 (643)
|+++|.+........+.+...+ +.+.|||+.|+-+.. . .|.. + +++|++|+.+|.+|+|+.+.
T Consensus 203 t~~~~~~a~i~~~~~~~l~~~l~~~~~~~~~v~Vv~GFig~~~~-------~G~~ttLGRGGSD~sA~~la~~L~A~~v~ 275 (521)
T PLN02551 203 TTDDFTNADILEATYPAVAKRLHGDWIDDPAVPVVTGFLGKGWK-------TGAITTLGRGGSDLTATTIGKALGLREIQ 275 (521)
T ss_pred ecCCCCccchhhhhHHHHHHHHHhhhccCCeEEEEcCccccCCC-------CCcEEecCCChHHHHHHHHHHHcCCCEEE
Confidence 7777765433222223333332 356899999955443 2 2322 3 99999999999999999999
Q ss_pred EeccCCccccCCCC-CCCccceeeeecccchhHHhcCCCCCccCCCchHHHHHHHHHHHcCCcEEEEeCCCcchHHHHHc
Q 006484 194 LLSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLE 272 (643)
Q Consensus 194 ~lTdVdGVy~~~P~-~p~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gv~v~I~~g~~~~~l~~~~~ 272 (643)
|+|||||||+.||+ .|++++|++|+|+|+.++..+|+ .-+ ++++...+.+++||++|.|.++|+
T Consensus 276 I~tDV~Gi~taDPr~v~~A~~l~~lsy~Ea~elA~~Ga------kVl--hp~ai~pa~~~~Ipi~vknt~~p~------- 340 (521)
T PLN02551 276 VWKDVDGVLTCDPRIYPNAVPVPYLTFDEAAELAYFGA------QVL--HPQSMRPAREGDIPVRVKNSYNPT------- 340 (521)
T ss_pred EEeCCCceeCCCCCCCCCceEecccCHHHHHHHHhCCC------ccc--CHHHHHHHHHCCceEEEEecCCCC-------
Confidence 99999999999997 99999999999999998776553 333 557999999999999999988763
Q ss_pred CCceeeEEecC
Q 006484 273 GKRVGTLFHRD 283 (643)
Q Consensus 273 g~~~GT~i~~~ 283 (643)
..||+|...
T Consensus 341 --~~GT~I~~~ 349 (521)
T PLN02551 341 --APGTLITKT 349 (521)
T ss_pred --CCCcEEecc
Confidence 469999754
No 210
>PRK09466 metL bifunctional aspartate kinase II/homoserine dehydrogenase II; Provisional
Probab=99.83 E-value=4.7e-20 Score=212.36 Aligned_cols=236 Identities=15% Similarity=0.162 Sum_probs=168.4
Q ss_pred cceEEEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcCCCc---cc--------
Q 006484 14 VKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSL---AD-------- 82 (643)
Q Consensus 14 ~~~iVIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~~~~---~~-------- 82 (643)
|+++|.||||+++.+.+ .++++++.|....+. ++|+|.|+.+.++..++...+....+. ..
T Consensus 10 M~~~V~KFGGtSv~~~e------~i~~v~~iI~~~~~~--~~vVVVSA~~~~Td~L~~~~~~~~~~~~~~~~~l~~i~~~ 81 (810)
T PRK09466 10 MGRQLHKFGGSSLADAK------CYRRVAGILAEYSQP--DDLVVVSAAGKTTNQLISWLKLSQTDRLSAHQVQQTLRRY 81 (810)
T ss_pred ceeEEEEECccccCCHH------HHHHHHHHHhhhccC--CEEEEEcCCCCCHHHHHHHHHHhhcCchhHHHHHHHHHHH
Confidence 45789999999999754 578888887655433 378888898888887755443221000 00
Q ss_pred -------cc--Ccc----------------------cchhHHHHHHhchHHHHHHHHHHhccCCCCcce-----eEeccc
Q 006484 83 -------LQ--KPQ----------------------NELDGKACAAVGQSSLMALYDTLFSQLDVTSSQ-----LLVTDS 126 (643)
Q Consensus 83 -------l~--~~~----------------------~~l~~~~~~a~G~~~~~~~~~~~l~~~g~~~~~-----~~~t~~ 126 (643)
+. ..+ .......+.+.|+..+..++..+|+..|+++.. ++.++.
T Consensus 82 h~~~~~~L~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~d~ils~GE~~Sa~lla~~L~~~G~~a~~ld~~~~i~~~~ 161 (810)
T PRK09466 82 QQDLIEGLLPAEQARSLLSRLISDLERLAALLDGGINDAQYAEVVGHGEVWSARLMAALLNQQGLPAAWLDARSFLRAER 161 (810)
T ss_pred HHHHHHHhhcchhhhHHHHHHHHHHHHHHHHhhccCCchhhhheecHHHHHHHHHHHHHHHhCCCCcEEEcHHHheecCC
Confidence 00 000 001124567889988888899999999987653 333333
Q ss_pred ccCcchh-hchHHHHHHHHHhCC--CeeEecCCCceeccCCCCCCCCce--e--ecchhHHHHHHhhcCCCEEEEeccCC
Q 006484 127 DFRDEDF-RKQLYDTVQSLLDLR--VIPIFNENDAVSTRKAPYEDSSGI--F--WDNDSLAGLLALELKADLLVLLSDVE 199 (643)
Q Consensus 127 ~~~~~~~-~~~~~~~i~~ll~~g--~iPVv~g~d~v~~~~~~~~~~~~~--~--~~~D~~A~~lA~~L~Ad~li~lTdVd 199 (643)
.+ .... .....+.++.++..+ .+||++|+.+... .|.. + ++||++|+.+|.+|+|+.+.|+||||
T Consensus 162 ~~-~~~i~~~~~~~~l~~~~~~~~~~v~Vv~GF~g~~~-------~G~~ttLGRGGSD~tA~~la~~l~A~~v~i~tDV~ 233 (810)
T PRK09466 162 AA-QPQVDEGLSYPLLQQLLAQHPGKRLVVTGFISRNE-------AGETVLLGRNGSDYSATLIGALAGVERVTIWSDVA 233 (810)
T ss_pred CC-CcccchhhhHHHHHHHHhccCCeEEEeeCccccCC-------CCCEEEcCCChHHHHHHHHHHHcCCCEEEEEeCCC
Confidence 22 2211 112346777777654 7999999655433 2222 3 89999999999999999999999999
Q ss_pred ccccCCCC-CCCccceeeeecccchhHHhcCCCCCccCCCchHHHHHHHHHHHcCCcEEEEeCCCcchHHHHHcCCceee
Q 006484 200 GLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGT 278 (643)
Q Consensus 200 GVy~~~P~-~p~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gv~v~I~~g~~~~~l~~~~~g~~~GT 278 (643)
|||+.||+ .|++++|++|+++|+.++...|++ -+ +.++...+.+.+||++|.|.++|+ ..||
T Consensus 234 Gi~taDPr~v~~A~~i~~isy~Ea~ela~~Gak------Vl--Hp~ti~pa~~~~Ipi~V~ntf~p~---------~~GT 296 (810)
T PRK09466 234 GVYSADPRKVKDACLLPLLRLDEASELARLAAP------VL--HARTLQPVSGSDIDLQLRCSYQPE---------QGST 296 (810)
T ss_pred ccccCCcccCCCceEcccCCHHHHHHHHHcCcc------cc--CHHHHHHHHHcCCeEEEecCCCCC---------CCce
Confidence 99999997 899999999999999987776543 33 557899999999999999988774 4589
Q ss_pred EEec
Q 006484 279 LFHR 282 (643)
Q Consensus 279 ~i~~ 282 (643)
+|..
T Consensus 297 ~I~~ 300 (810)
T PRK09466 297 RIER 300 (810)
T ss_pred EEec
Confidence 8865
No 211
>PRK08961 bifunctional aspartate kinase/diaminopimelate decarboxylase protein; Provisional
Probab=99.82 E-value=1.5e-19 Score=212.34 Aligned_cols=239 Identities=18% Similarity=0.167 Sum_probs=170.3
Q ss_pred cceEEEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcCC-Ccc-----------
Q 006484 14 VKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNS-SLA----------- 81 (643)
Q Consensus 14 ~~~iVIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~~-~~~----------- 81 (643)
|+++|.||||+++.+.+ .++++++.|+.-.+.|.++|+|.|+.+.++..++........ .+.
T Consensus 7 ~~~~V~KFGGtSv~~~~------~~~~v~~ii~~~~~~~~~~vvVvSA~~~~Td~L~~~~~~~~~~~~~~~~~~i~~~~~ 80 (861)
T PRK08961 7 DRWVVLKFGGTSVSRRH------RWDTIAKIVRKRLAEGGRVLVVVSALSGVSNELEAIIAAAGAGDSASRVAAIRQRHR 80 (861)
T ss_pred CCcEEEEECccccCCHH------HHHHHHHHHHhhcccCCCEEEEEeCCCCchHHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence 46789999999999753 578888888765567889999999998888876543221000 000
Q ss_pred ----cc--cCcc----------------------cchhHHHHHHhchHHHHHHHHHHhccCCCCcc-----eeEeccccc
Q 006484 82 ----DL--QKPQ----------------------NELDGKACAAVGQSSLMALYDTLFSQLDVTSS-----QLLVTDSDF 128 (643)
Q Consensus 82 ----~l--~~~~----------------------~~l~~~~~~a~G~~~~~~~~~~~l~~~g~~~~-----~~~~t~~~~ 128 (643)
++ +..+ ..-....+.+.|+..+..++...|+..|+++. +++.+++++
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~i~s~GE~lSa~lla~~L~~~Gi~a~~ld~~~~~~~~~~~ 160 (861)
T PRK08961 81 ELLAELGVDAEAVLAERLAALQRLLDGIRALTRASLRWQAEVLGQGELLSTTLGAAYLEASGLDMGWLDAREWLTALPQP 160 (861)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhccCChhhhheEEEehHHHHHHHHHHHHHhCCCCcEEEcHHHhEeecCcc
Confidence 00 0000 00001234478888777788999999998864 344444321
Q ss_pred C--cchhh-------chHHHHHHHHHhCC-CeeEecCCCceeccCCCCCCCCce--e--ecchhHHHHHHhhcCCCEEEE
Q 006484 129 R--DEDFR-------KQLYDTVQSLLDLR-VIPIFNENDAVSTRKAPYEDSSGI--F--WDNDSLAGLLALELKADLLVL 194 (643)
Q Consensus 129 ~--~~~~~-------~~~~~~i~~ll~~g-~iPVv~g~d~v~~~~~~~~~~~~~--~--~~~D~~A~~lA~~L~Ad~li~ 194 (643)
. ....+ ......++.+++.+ .|||+.|+.+... +|.. + +++|++|+.+|.+|+||+|++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Vv~Gf~g~~~-------~g~~ttLgrggsD~~A~~iA~~l~a~~~~i 233 (861)
T PRK08961 161 NQSEWSQYLSVSCQWQSDPALRERFAAQPAQVLITQGFIARNA-------DGGTALLGRGGSDTSAAYFAAKLGASRVEI 233 (861)
T ss_pred ccccccccccceecHhhHHHHHHHHhccCCeEEEeCCcceeCC-------CCCEEEEeCCchHHHHHHHHHHcCCCEEEE
Confidence 1 11111 12345666677665 4999999655443 2322 3 999999999999999999999
Q ss_pred eccCCccccCCCC-CCCccceeeeecccchhHHhcCCCCCccCCCchHHHHHHHHHHHcCCcEEEEeCCCcchHHHHHcC
Q 006484 195 LSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEG 273 (643)
Q Consensus 195 lTdVdGVy~~~P~-~p~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gv~v~I~~g~~~~~l~~~~~g 273 (643)
+|||||||+.||+ +|++++|++|+++|+.++.. .|+|..|++++..+.++|||++|.|++.|+
T Consensus 234 ~tdv~Gv~t~dP~~~~~a~~i~~ls~~e~~el~~--------~g~~v~~~~a~~~a~~~~i~i~v~~~~~~~-------- 297 (861)
T PRK08961 234 WTDVPGMFSANPKEVPDARLLTRLDYDEAQEIAT--------TGAKVLHPRSIKPCRDAGIPMAILDTERPD-------- 297 (861)
T ss_pred EeCCCccccCCCCCCCCceEecccCHHHHHHHHH--------CCCeEECHHHHHHHHHCCCCEEEEeCCCCC--------
Confidence 9999999999996 89999999999999987654 467899999999999999999999998774
Q ss_pred CceeeEEec
Q 006484 274 KRVGTLFHR 282 (643)
Q Consensus 274 ~~~GT~i~~ 282 (643)
..||+|..
T Consensus 298 -~~gT~I~~ 305 (861)
T PRK08961 298 -LSGTSIDG 305 (861)
T ss_pred -CCccEEeC
Confidence 34666654
No 212
>PRK09436 thrA bifunctional aspartokinase I/homoserine dehydrogenase I; Provisional
Probab=99.81 E-value=3.2e-19 Score=207.18 Aligned_cols=236 Identities=17% Similarity=0.222 Sum_probs=169.7
Q ss_pred EEEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcCC---Cccc-----------
Q 006484 17 LVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNS---SLAD----------- 82 (643)
Q Consensus 17 iVIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~~---~~~~----------- 82 (643)
.|.||||+++.+. +.+..+++.|....+. .++|+|+|+.+.++..++........ .+..
T Consensus 2 ~V~KFGGtSv~~~------~~i~~v~~iI~~~~~~-~~~vVVVSA~~~vTd~L~~~~~~~~~~~~~~~~~~~~~~~~h~~ 74 (819)
T PRK09436 2 RVLKFGGTSVANA------ERFLRVADIIESNARQ-EQVAVVLSAPAKVTNHLVAMIEKAAKGDDAYPEILDAERIFHEL 74 (819)
T ss_pred EEEEeCccccCCH------HHHHHHHHHHHhhccc-CCEEEEEcCCcCcHHHHHHHHHHHhcCCchHHHHHHHHHHHHHH
Confidence 5999999999974 3578888888765444 68999999998898877554321110 0000
Q ss_pred ---c----cC--cc--------------------------cchhHHHHHHhchHHHHHHHHHHhccCCCCcce-----eE
Q 006484 83 ---L----QK--PQ--------------------------NELDGKACAAVGQSSLMALYDTLFSQLDVTSSQ-----LL 122 (643)
Q Consensus 83 ---l----~~--~~--------------------------~~l~~~~~~a~G~~~~~~~~~~~l~~~g~~~~~-----~~ 122 (643)
+ .. .. .+-....+.+.|+..+..++...|+..|+++.. ++
T Consensus 75 ~~~l~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~d~i~s~GE~lSa~lla~~L~~~Gi~a~~ld~~~~i 154 (819)
T PRK09436 75 LDGLAAALPGFDLAQLKAKVDQEFAQLKDILHGISLLGECPDSVNAAIISRGERLSIAIMAAVLEARGHDVTVIDPRELL 154 (819)
T ss_pred HHHHHhhccchhhHHHHHHHHHHHHHHHHHHHHHHhhccCChhhhhheeeHHHHHHHHHHHHHHHhCCCCeEEECHHHeE
Confidence 0 00 00 000123566888888878888999999987643 45
Q ss_pred ecccccCcchh-hchHHHHHHHHH-hCCCeeEecCCCceeccCCCCCCCCce--e--ecchhHHHHHHhhcCCCEEEEec
Q 006484 123 VTDSDFRDEDF-RKQLYDTVQSLL-DLRVIPIFNENDAVSTRKAPYEDSSGI--F--WDNDSLAGLLALELKADLLVLLS 196 (643)
Q Consensus 123 ~t~~~~~~~~~-~~~~~~~i~~ll-~~g~iPVv~g~d~v~~~~~~~~~~~~~--~--~~~D~~A~~lA~~L~Ad~li~lT 196 (643)
+|+++|.+... +....+.+++++ +.+.|||+.|+-+... .|.. + +++|++|+.+|..|+||.++++|
T Consensus 155 ~t~~~~~~~~~~~~~~~~~i~~~~~~~~~v~Vv~Gfig~~~-------~G~~ttlGRgGSD~~A~~~A~~l~A~~~~i~t 227 (819)
T PRK09436 155 LADGHYLESTVDIAESTRRIAASFIPADHVILMPGFTAGNE-------KGELVTLGRNGSDYSAAILAACLDADCCEIWT 227 (819)
T ss_pred EecCCCCCceechHhhHHHHHHHHhcCCcEEEecCcccCCC-------CCCEEEeCCCCchHHHHHHHHHcCCCEEEEEE
Confidence 66655554322 122345566654 4688999998543222 2322 3 78999999999999999999999
Q ss_pred cCCccccCCCC-CCCccceeeeecccchhHHhcCCCCCccCCCchHHHHHHHHHHHcCCcEEEEeCCCcchHHHHHcCCc
Q 006484 197 DVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKR 275 (643)
Q Consensus 197 dVdGVy~~~P~-~p~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gv~v~I~~g~~~~~l~~~~~g~~ 275 (643)
||||||+.||+ +|++++|++|+++|+.++... |-+..|++++..+.++|+|++|.|++.|+ .
T Consensus 228 dVdGvyt~DP~~~~~A~~i~~isy~ea~el~~~--------G~kvlhp~a~~~a~~~~Ipi~i~n~~~p~---------~ 290 (819)
T PRK09436 228 DVDGVYTADPRVVPDARLLKSLSYQEAMELSYF--------GAKVLHPRTIAPIAQFQIPCLIKNTFNPQ---------A 290 (819)
T ss_pred CCCceECCCCCCCCCCeEeeEecHHHHHHHHhc--------CCccchHHHHHHHHHCCceEEEccCCCCC---------C
Confidence 99999999996 899999999999999976543 33677899999999999999999998874 4
Q ss_pred eeeEEecC
Q 006484 276 VGTLFHRD 283 (643)
Q Consensus 276 ~GT~i~~~ 283 (643)
.||+|...
T Consensus 291 ~GT~I~~~ 298 (819)
T PRK09436 291 PGTLIGAE 298 (819)
T ss_pred CceEEEec
Confidence 69998654
No 213
>cd04240 AAK_UC AAK_UC: Uncharacterized (UC) amino acid kinase-like proteins found mainly in archaea and a few bacteria. Sequences in this CD are members of the Amino Acid Kinase (AAK) superfamily.
Probab=99.79 E-value=2.4e-18 Score=167.92 Aligned_cols=202 Identities=24% Similarity=0.293 Sum_probs=128.5
Q ss_pred EEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcCCCcccccCcccchhHHHHHH
Q 006484 18 VVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAA 97 (643)
Q Consensus 18 VIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~a 97 (643)
|||+|||.+.+ +..+.+.++.+. |++++||.|||+...+.. +... ..++.+. .....++.+
T Consensus 1 vvKiGGsl~~~---------~~~~~~~l~~~~--~~~v~iV~GGG~~A~~~r-~~~~--~~g~~~~-----~ad~mgila 61 (203)
T cd04240 1 VVKIGGSLIRE---------AVRLLRWLKTLS--GGGVVIVPGGGPFADVVR-RYQE--RKGLSDA-----AAHWMAILA 61 (203)
T ss_pred CEEEccccccc---------HHHHHHHHHhcc--CCCEEEEcCCcHHHHHHH-HHHH--HcCCChH-----HHHHHHHHH
Confidence 79999999864 345666665553 889999999998644432 2221 1111111 111234444
Q ss_pred hchHHHHHHHHHHhccCCCCcceeEecccccCcchhhchHHHHHHHHHhCCCeeEecCCCceeccCCCCCCCCceeecch
Q 006484 98 VGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDND 177 (643)
Q Consensus 98 ~G~~~~~~~~~~~l~~~g~~~~~~~~t~~~~~~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~~~~~~~~~D 177 (643)
.-|+.+ +++... .... . .....+.+++..|.+||+........ ........++|+|
T Consensus 62 t~~na~------~l~~~~-------------~~~~-~-~~~~~~~~~~~~g~ipV~~P~~~~~~---~~~~~~~~~~ttD 117 (203)
T cd04240 62 MEQYGY------LLADLE-------------PRLV-A-RTLAELTDVLERGKIAILLPYRLLLD---TDPLPHSWEVTSD 117 (203)
T ss_pred HHHHHH------HHhccC-------------Cccc-c-CCHHHHHHHHHCCCcEEEeCchhhcc---cCCCCcccccCHH
Confidence 444332 122110 0000 0 11356888999999999953111000 0001112239999
Q ss_pred hHHHHHHhhcCCCEEEEeccCCccccCCCCCCCccceeeeecccchhHHhcCCCCCccCCCchHHHHHHHHHHHcCCcEE
Q 006484 178 SLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVV 257 (643)
Q Consensus 178 ~~A~~lA~~L~Ad~li~lTdVdGVy~~~P~~p~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gv~v~ 257 (643)
++|+++|..|+|++|+++|||||||++| +++|++|+.+|+.. . ... .+|.+| .+.++|++++
T Consensus 118 ~lAa~lA~~l~A~~Li~ltdVdGVy~~d-----a~~i~~i~~~e~~~---~----~~i-d~~~~~-----~~~~~gi~v~ 179 (203)
T cd04240 118 SIAAWLAKKLGAKRLVIVTDVDGIYEKD-----GKLVNEIAAAELLG---E----TSV-DPAFPR-----LLTKYGIRCY 179 (203)
T ss_pred HHHHHHHHHcCCCEEEEEeCCccccCCC-----CcCccccCHHHhCC---C----Cee-hhhHHH-----HHHhCCCeEE
Confidence 9999999999999999999999999874 78999999876542 1 111 124444 3578899999
Q ss_pred EEeCCCcchHHHHHcCC-ceeeEE
Q 006484 258 ITSGFAMDSIIKVLEGK-RVGTLF 280 (643)
Q Consensus 258 I~~g~~~~~l~~~~~g~-~~GT~i 280 (643)
|+||+.|+.+...+.|+ ..||.|
T Consensus 180 I~~g~~~~~l~~~l~g~~~~GT~I 203 (203)
T cd04240 180 VVNGDDPERVLAALRGREGVGTRI 203 (203)
T ss_pred EECCCCccHHHHHHCCCCCCCCCC
Confidence 99999999998888887 678864
No 214
>PRK09181 aspartate kinase; Validated
Probab=99.69 E-value=1.3e-16 Score=173.79 Aligned_cols=162 Identities=19% Similarity=0.197 Sum_probs=121.5
Q ss_pred HHHHHhchHHHHHHHHHHhccCCCCcceeEecccccCcchhhchHHHHHHHHHh----CCCeeEecCCCceeccCCCCCC
Q 006484 93 KACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLD----LRVIPIFNENDAVSTRKAPYED 168 (643)
Q Consensus 93 ~~~~a~G~~~~~~~~~~~l~~~g~~~~~~~~t~~~~~~~~~~~~~~~~i~~ll~----~g~iPVv~g~d~v~~~~~~~~~ 168 (643)
..+.+.|+..+..++...|+..|+++..+-.+ ++....... ..+.+...+. .+.|||+.|+.. . .
T Consensus 140 D~l~s~GE~lSa~lla~~L~~~Gi~a~~ld~~--~~~~~~~~~-~~~~i~~~l~~~~~~~~v~Vv~GF~~--~------~ 208 (475)
T PRK09181 140 EMLASIGEAHSAFNTALLLQNRGVNARFVDLT--GWDDDDPLT-LDERIKKAFKDIDVTKELPIVTGYAK--C------K 208 (475)
T ss_pred HHHhhHhHHHHHHHHHHHHHhCCCCeEEeccc--cccCCcccc-hHHHHHHHHhhhccCCcEEEecCCcC--C------C
Confidence 45678898888788889999999887643222 111111111 1345555555 578999998531 1 1
Q ss_pred CCc-e-e--ecchhHHHHHHhhcCCCEEEEeccCCccccCCCC-C--CCccceeeeecccchhHHhcCCCCCccCCCchH
Q 006484 169 SSG-I-F--WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-E--PNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTA 241 (643)
Q Consensus 169 ~~~-~-~--~~~D~~A~~lA~~L~Ad~li~lTdVdGVy~~~P~-~--p~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~ 241 (643)
.|. + + ++||++|+.+|.+|+|+.+.|||||+ ||+.||+ . |++++|++||++|+.++...|++ +-
T Consensus 209 ~G~itTLGRGGSDyTAailAa~L~A~~~~IwTDV~-I~taDPriV~~~~A~~i~~lsy~Ea~ELA~~GAk--------VL 279 (475)
T PRK09181 209 EGLMRTFDRGYSEMTFSRIAVLTGADEAIIHKEYH-LSSADPKLVGEDKVVPIGRTNYDVADQLANLGME--------AI 279 (475)
T ss_pred CCCEEecCCChHHHHHHHHHHHcCCCEEEEeCCCc-cccCCCCcCCCCCCeEcCccCHHHHHHHHHcCch--------hc
Confidence 222 2 3 99999999999999999999999997 9999997 6 79999999999999987776643 34
Q ss_pred HHHHHHHHHHcCCcEEEEeCCCcchHHHHHcCCceeeEEecC
Q 006484 242 KVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 283 (643)
Q Consensus 242 Kl~aa~~a~~~gv~v~I~~g~~~~~l~~~~~g~~~GT~i~~~ 283 (643)
+.++...+.+.+||++|.|.++|+ ..||+|...
T Consensus 280 Hp~ti~pa~~~~Ipi~V~nt~~p~---------~~GT~I~~~ 312 (475)
T PRK09181 280 HPKAAKGLRQAGIPLRIKNTFEPE---------HPGTLITKD 312 (475)
T ss_pred CHHHHHHHHHcCCeEEEecCCCCC---------CCCeEEecC
Confidence 557999999999999999988764 469999754
No 215
>cd04248 AAK_AK-Ectoine AAK_AK-Ectoine: Amino Acid Kinase Superfamily (AAK), AK-Ectoine; this CD includes the N-terminal catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway found in Methylomicrobium alcaliphilum, Vibrio cholerae, and other various halotolerant or halophilic bacteria. Bacteria exposed to hyperosmotic stress accumulate organic solutes called 'compatible solutes' of which ectoine, a heterocyclic amino acid, is one. Apart from its osmotic function, ectoine also exhibits a protective effect on proteins, nucleic acids and membranes against a variety of stress factors. de novo synthesis of ectoine starts with the phosphorylation of L-aspartate and shares its first two enzymatic steps with the biosynthesis of amino acids of the aspartate family: aspartokinase and L-aspartate-semialdehyde dehydrogenase. The M. alcaliphilum and the V. cholerae aspartokinases are encoded on the ectABCask operon.
Probab=99.68 E-value=1.1e-15 Score=154.58 Aligned_cols=158 Identities=18% Similarity=0.182 Sum_probs=114.6
Q ss_pred HHHHhchHHHHHHHHHHhccCCCCcceeEecccccCcchhhchHHHHHHHHH----hCCCeeEecCCCceeccCCCCCCC
Q 006484 94 ACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLL----DLRVIPIFNENDAVSTRKAPYEDS 169 (643)
Q Consensus 94 ~~~a~G~~~~~~~~~~~l~~~g~~~~~~~~t~~~~~~~~~~~~~~~~i~~ll----~~g~iPVv~g~d~v~~~~~~~~~~ 169 (643)
.+.++|+..+..++...|++.|+++.-+-.+. +...+... ..+.+.+.+ ..+.|||+.|+.. . .+
T Consensus 135 ~l~S~GE~~Sa~l~a~~L~~~Gi~A~~vD~~~--~~~~~~~t-~~~~i~~~~~~~~~~~~v~IvtGF~~--~------~~ 203 (304)
T cd04248 135 LLASLGEAHSAFNTALLLQNRGVNARFVDLSG--WRDSGDMT-LDERISEAFRDIDPRDELPIVTGYAK--C------AE 203 (304)
T ss_pred HHhhhCHHHHHHHHHHHHHHCCCCeEEECccc--ccccCCCC-cHHHHHHHHHhhccCCcEEEeCCccC--C------CC
Confidence 56688887777778888988998766432221 11000111 112333333 3678999998521 1 13
Q ss_pred Cce--e--ecchhHHHHHHhhcCCCEEEEeccCCccccCCCC-C--CCccceeeeecccchhHHhcCCCCCccCCCchHH
Q 006484 170 SGI--F--WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-E--PNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAK 242 (643)
Q Consensus 170 ~~~--~--~~~D~~A~~lA~~L~Ad~li~lTdVdGVy~~~P~-~--p~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~K 242 (643)
|.. + +.||++|+.+|.+|+|+.+.|+|||+ ||+.||+ . |+++.|++|+++|+.++...|+ .-+ +
T Consensus 204 G~itTLGRGGSDyTAs~iAa~l~A~ev~I~TDV~-i~taDPriV~~~~A~~i~~lsY~EA~ELA~~Ga------kvL--H 274 (304)
T cd04248 204 GLMREFDRGYSEMTFSRIAVLTGASEAIIHKEFH-LSSADPKLVGEDKARPIGRTNYDVADQLANLGM------EAI--H 274 (304)
T ss_pred CCEEEcCCCcHHHHHHHHHHHcCCCEEEEECCCc-eecCCCCccCCCCceEeCccCHHHHHHHHHcCh------hhc--C
Confidence 332 3 99999999999999999999999996 9999997 6 6899999999999998776553 333 4
Q ss_pred HHHHHHHHHcCCcEEEEeCCCcchHHHHHcCCceeeEE
Q 006484 243 VNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLF 280 (643)
Q Consensus 243 l~aa~~a~~~gv~v~I~~g~~~~~l~~~~~g~~~GT~i 280 (643)
++++..+.+.+||++|.|.++|+ ..||+|
T Consensus 275 P~ai~pa~~~~IPi~Vkntf~P~---------~~GTlI 303 (304)
T cd04248 275 PKAAKGLRQAGIPLRVKNTFEPD---------HPGTLI 303 (304)
T ss_pred HHHHHHHHHcCCeEEEecCCCCC---------CCCcee
Confidence 56999999999999999988874 458876
No 216
>KOG0456 consensus Aspartate kinase [Amino acid transport and metabolism]
Probab=99.59 E-value=9.9e-15 Score=146.99 Aligned_cols=240 Identities=15% Similarity=0.160 Sum_probs=156.8
Q ss_pred eEEEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcC-CCcc-----c-------
Q 006484 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVN-SSLA-----D------- 82 (643)
Q Consensus 16 ~iVIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~-~~~~-----~------- 82 (643)
++|.||||+++..-. ....-++..+.-...++++|-+++...++.+....+... .+.. +
T Consensus 80 ~~V~KFGGsSV~s~~--------~~i~v~~l~~~~~~e~~~vV~SA~sk~Tna~~ta~~~~~~c~va~~~sie~l~iIke 151 (559)
T KOG0456|consen 80 TCVMKFGGSSVGSAE--------RMIEVAVLILYFPDERPVVVLSAMSKTTNALLTAGEKAVCCGVANVESIEELSIIKE 151 (559)
T ss_pred EEEEecCCccccccc--------hhhhhhHHHHhcCCCCeEEEEEccccchhhhhhhhhheecccccCcchHHHHHHHHH
Confidence 799999999998643 122333344444467999999998877765433222111 0000 0
Q ss_pred --ccCc---------ccc--------h------------hHHHHHHhchHHHHHHHHHHhccCCCCcceeE------ecc
Q 006484 83 --LQKP---------QNE--------L------------DGKACAAVGQSSLMALYDTLFSQLDVTSSQLL------VTD 125 (643)
Q Consensus 83 --l~~~---------~~~--------l------------~~~~~~a~G~~~~~~~~~~~l~~~g~~~~~~~------~t~ 125 (643)
++.. +.. | .+.-+.++|+..+..++...|...|..+.|+- .+.
T Consensus 152 ~Hi~ta~e~~~d~~v~~~~le~leq~Lk~i~mm~Elt~RTrD~lvs~GE~lS~rf~aA~lnd~G~kar~~D~~~I~~~~~ 231 (559)
T KOG0456|consen 152 LHIRTAHELIVDPAVIAKLLEGLEQLLKGIAMMKELTLRTRDYLVSFGECLSTRFFAAYLNDIGHKARQYDAFEIGFITT 231 (559)
T ss_pred HHHhhHHHhccCHHHHHHHHHHHHHHHHHHHHHHhcchhhhhHhhhhhhHHHHHHHHHHHHhcCccceeechhheecccc
Confidence 0000 000 0 01245588888877788889999998877752 233
Q ss_pred cccCcchh-hchHHHHHHHH----HhCCCeeEecCCCc-eeccCCCCCCCCceeecchhHHHHHHhhcCCCEEEEeccCC
Q 006484 126 SDFRDEDF-RKQLYDTVQSL----LDLRVIPIFNENDA-VSTRKAPYEDSSGIFWDNDSLAGLLALELKADLLVLLSDVE 199 (643)
Q Consensus 126 ~~~~~~~~-~~~~~~~i~~l----l~~g~iPVv~g~d~-v~~~~~~~~~~~~~~~~~D~~A~~lA~~L~Ad~li~lTdVd 199 (643)
++|..... +-..+...+.+ .....+||+.|+=+ -.+.+ .-++.-.+.+|..|+.+|.+|++|.+.+|.|||
T Consensus 232 d~~t~~d~~~a~~~av~k~~~~~~aken~VPVvTGf~Gk~~~tg---~lt~lGRG~sDl~At~i~~al~~~EiQVWKdVD 308 (559)
T KOG0456|consen 232 DDFTNDDILEATYPAVSKLLSGDWAKENAVPVVTGFLGKGWPTG---ALTTLGRGGSDLTATTIGKALGLDEIQVWKDVD 308 (559)
T ss_pred ccccchhHHHHHHHHHHHhcccccccCCccceEeeccccCcccc---ceecccCCchhhHHHHHHHHcCchhhhhhhhcC
Confidence 33332211 11112222222 23467999998433 11100 001111388999999999999999999999999
Q ss_pred ccccCCCC-CCCccceeeeecccchhHHhcCCCCCccCCCchHHHHHHHHHHHcCCcEEEEeCCCcchHHHHHcCCceee
Q 006484 200 GLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGT 278 (643)
Q Consensus 200 GVy~~~P~-~p~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gv~v~I~~g~~~~~l~~~~~g~~~GT 278 (643)
||++.||+ .|.++++|.+|++|+.++..+|+. .-++.++..+.+..|||.|-|..+|- ..||
T Consensus 309 Gv~T~DP~~~p~Ar~vp~lT~dEAaELaYfGaq--------VlHP~sM~~~~~~~IPvRvKN~~NP~---------~~GT 371 (559)
T KOG0456|consen 309 GVLTCDPRIYPGARLVPYLTFDEAAELAYFGAQ--------VLHPFSMRPAREGRIPVRVKNSYNPT---------APGT 371 (559)
T ss_pred ceEecCCccCCCccccCccCHHHHHHHHhhhhh--------hccccccchhhccCcceEeecCCCCC---------CCce
Confidence 99999995 999999999999999987776632 33556778889999999999987773 5699
Q ss_pred EEecC
Q 006484 279 LFHRD 283 (643)
Q Consensus 279 ~i~~~ 283 (643)
+|.++
T Consensus 372 vI~~d 376 (559)
T KOG0456|consen 372 VITPD 376 (559)
T ss_pred Eeccc
Confidence 99886
No 217
>KOG2436 consensus Acetylglutamate kinase/acetylglutamate synthase [Amino acid transport and metabolism]
Probab=99.38 E-value=1.7e-12 Score=136.30 Aligned_cols=245 Identities=20% Similarity=0.204 Sum_probs=151.9
Q ss_pred cceEEEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhhHHHhhhhhhcCCCccc-ccCcccchhH
Q 006484 14 VKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLAD-LQKPQNELDG 92 (643)
Q Consensus 14 ~~~iVIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~~~~~~~~~~~~~~~~~-l~~~~~~l~~ 92 (643)
.+.+|+|-|+...++ .++.++++++.|+..|.++|||||+++|+++.+. .+++++.|.+ ++.+....++
T Consensus 95 q~fvV~~~g~~~~t~--------~~~sl~s~lafl~h~gl~pIvv~g~~~qin~~l~--~~~ie~~y~~~~RvTda~t~q 164 (520)
T KOG2436|consen 95 QKFVVIKSGEAISTS--------LLHSLASDLAFLHHVGLRPIVVPGTQPQINRLLA--ERGIEPEYVDGYRVTDAHTLQ 164 (520)
T ss_pred ceEEEEecccccccc--------hHHHHHHHHHHHhcCCceEEEecCccHHHHHHHH--HcCCCcccccceecccHHHHH
Confidence 445555555555333 2689999999999999999999999999999653 4567766655 2222211111
Q ss_pred HHHH-HhchHHHHHHHHHHhccCCCCccee--------Eec-c-------cccCcchh-hchHHHHHHHHHhCCCeeEec
Q 006484 93 KACA-AVGQSSLMALYDTLFSQLDVTSSQL--------LVT-D-------SDFRDEDF-RKQLYDTVQSLLDLRVIPIFN 154 (643)
Q Consensus 93 ~~~~-a~G~~~~~~~~~~~l~~~g~~~~~~--------~~t-~-------~~~~~~~~-~~~~~~~i~~ll~~g~iPVv~ 154 (643)
.+.. .+++.... +-..|+++|-++... ..+ + .+|.-.+. .+.+.+.|+.+++.|.+|++.
T Consensus 165 ~~~~~~~~E~n~~--lv~nL~~~g~~ar~~s~g~~v~~~f~a~~~~v~d~~~y~~~gei~~vd~d~i~~l~~~G~mp~L~ 242 (520)
T KOG2436|consen 165 AAKESVSLEANLN--LVINLSQLGTRARPSSSGVRVGNFFPADRNGVLDGEDYGLVGEIKKVDVDRIRHLLDAGSMPLLR 242 (520)
T ss_pred HhhhcchhhhhhH--HHHHHHHhhceeccccccccccceeecccccccccceeeeecccceechhhhhhhhhCCCchheh
Confidence 1111 22222211 113333433222111 111 1 11111111 225689999999999999995
Q ss_pred CCCceeccCCCCCCCCcee-ecchhHHHHHHhhcCCCEEEEeccCCccccCCCCCCCccceeeeecccchhHHhcCCCCC
Q 006484 155 ENDAVSTRKAPYEDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSR 233 (643)
Q Consensus 155 g~d~v~~~~~~~~~~~~~~-~~~D~~A~~lA~~L~Ad~li~lTdVdGVy~~~P~~p~a~~i~~i~~~e~~~~~~~g~~~~ 233 (643)
. ++.+++|..+ +|+|.+|..+|.+|+|+++++++|+.-+...+ ++.++.++.++....+...+...
T Consensus 243 s--------la~TaSGqvlnvNa~~~a~elA~~L~~~kli~l~d~g~~l~e~-----ge~~S~l~l~~e~~~l~k~~qq~ 309 (520)
T KOG2436|consen 243 S--------LAATASGQVLNVNADEVAGELALALGPDKLILLMDKGRILKEN-----GEDISSLILQEEDAGLRKPSQQK 309 (520)
T ss_pred h--------hcccCccceEEeeHHHHhhHHHhccCcceeEEecccccccccC-----cccccccccchhHhhhhhhhhhc
Confidence 2 2334567777 99999999999999999999999983344444 57888888777666554433334
Q ss_pred ccCCCchHHHHHHHHHHHcCCcEEEEeCCCcchH-HHHHcCCceeeEEecC
Q 006484 234 VGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSI-IKVLEGKRVGTLFHRD 283 (643)
Q Consensus 234 ~~~ggM~~Kl~aa~~a~~~gv~v~I~~g~~~~~l-~~~~~g~~~GT~i~~~ 283 (643)
.++++|++++..+.....-...-+.....+..++ .+++++.+.||.+...
T Consensus 310 ~~a~~~v~aV~~~~~~~~p~~~s~~i~~~t~~n~~~~~~te~G~~t~~~~g 360 (520)
T KOG2436|consen 310 NIAANNVKAVKDGIDSSLPRPSSYNIAITTQQNLIKELFTEKGAGTLISGG 360 (520)
T ss_pred ccccccchhhhhheeeccCcCCCCCcceeecccccceeeccCCCCccccCc
Confidence 6788888887777666332222234444445554 6667777778887765
No 218
>COG2054 Uncharacterized archaeal kinase related to aspartokinases, uridylate kinases [General function prediction only]
Probab=99.35 E-value=2.6e-11 Score=110.85 Aligned_cols=95 Identities=24% Similarity=0.335 Sum_probs=78.3
Q ss_pred e-ecchhHHHHHHhhcCCCEEEEeccCCccccCCCCCCCccceeeeecccchhHHhcCCCCCccCCCchHHHHHHHHHHH
Q 006484 173 F-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAAC 251 (643)
Q Consensus 173 ~-~~~D~~A~~lA~~L~Ad~li~lTdVdGVy~~~P~~p~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~ 251 (643)
+ +.||.++.++|.++++.++++.|||||||+.+| .++++++|+.+++.. | ...-.+..|+ .+.+
T Consensus 114 W~VTSDsis~~Ia~~~~~~~vv~aTDVdGI~~~~~---~~kLv~eI~A~dl~~----~---~t~vD~~~P~-----Ll~k 178 (212)
T COG2054 114 WEVTSDSISVWIAAKAGATEVVKATDVDGIYEEDP---KGKLVREIRASDLKT----G---ETSVDPYLPK-----LLVK 178 (212)
T ss_pred eeecccHHHHHHHHHcCCcEEEEEecCCcccccCC---cchhhhhhhHhhccc----C---cccccchhhH-----HHHH
Confidence 5 999999999999999999999999999999965 468999998887763 2 1223445565 4678
Q ss_pred cCCcEEEEeCCCcchHHHHHcCC-ceeeEEec
Q 006484 252 AGIPVVITSGFAMDSIIKVLEGK-RVGTLFHR 282 (643)
Q Consensus 252 ~gv~v~I~~g~~~~~l~~~~~g~-~~GT~i~~ 282 (643)
.+..++|+||+.|+++.....|+ ..||.+..
T Consensus 179 ~~m~~~Vvng~~pervi~~lrGk~~v~T~Ivg 210 (212)
T COG2054 179 YKMNCRVVNGKEPERVILALRGKEVVGTLIVG 210 (212)
T ss_pred cCCceEEECCCCHHHHHHHHhccccceEEEeC
Confidence 89999999999999998888774 57998875
No 219
>PF05893 LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR008670 This family consists of several bacterial Acyl-CoA reductase (LuxC) proteins. The channelling of fatty acids into the fatty aldehyde substrate for the bacterial bioluminescence reaction is catalysed by a fatty acid reductase multienzyme complex, which channels fatty acids through the thioesterase (LuxD), synthetase (LuxE) and reductase (LuxC) components [].; GO: 0003995 acyl-CoA dehydrogenase activity, 0008218 bioluminescence, 0055114 oxidation-reduction process
Probab=99.34 E-value=5.1e-10 Score=120.31 Aligned_cols=239 Identities=15% Similarity=0.147 Sum_probs=161.4
Q ss_pred EEEEeeeeeeEEEEcCCC-chhHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccc-cCcCceEeec--C-cc
Q 006484 396 LEKTSCPLGVLLIVFESR-PDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVT--S-RE 470 (643)
Q Consensus 396 ~~~~~~PlGvv~~I~p~~-P~~~~~~~~~AlaaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~a-lP~g~v~~v~--~-~~ 470 (643)
.+..+.|.|+|+.|.|-| |.+.++.++.+|.+||..|+|+|+.-|.++..|.+.+.+...+. + ...+.++. + ..
T Consensus 81 ~~~~~~p~g~v~Hi~agNvp~~~~~S~~~~lL~gn~nivK~ss~d~~~~~~l~~~l~~~~~~~~l-~~~i~v~~~~~~d~ 159 (399)
T PF05893_consen 81 GYVRAFPRGLVFHIAAGNVPLVGFYSLVRGLLSGNANIVKLSSRDPFLAPALLRSLAEIDPEHPL-ADSIAVVYWPGGDE 159 (399)
T ss_pred chhhccCCceEEEEcCCCccchHHHHHHHHHHhCCceEEECCCCchhHHHHHHHHHHhhCccchh-hhcEEEEEecCCch
Confidence 456799999999999965 88999999999999999999999999999999999887643221 2 13466663 3 44
Q ss_pred hHhHhhhCCCCccEEEeecCHHHHHHHHHhcC-CCEEEecCc-cceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeE
Q 006484 471 EIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK-IPVLGHADG-ICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETL 547 (643)
Q Consensus 471 ~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a~-~p~~lelGG-~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv 547 (643)
.+.+.+.. ..|.+..+||.++.+.+.+... .+-.+.-|- .+-.|++.+++++++++.+.+=.+...| .|.|++.+
T Consensus 160 ~~~~~~~~--~~D~vv~wGgd~ti~~ir~~~~~~~~~i~fg~k~S~avi~~~~~~~~~a~~~a~Di~~~dQ~aCsSp~~i 237 (399)
T PF05893_consen 160 ELEEALSQ--QADAVVAWGGDETIRAIRQPLPPGARLIEFGPKYSFAVIDAEAELEEAARRLANDIFLFDQQACSSPQVI 237 (399)
T ss_pred HHHHHHHH--HCCEEEEeCCHHHHHHHHHHcCCCCcEeeeCCceEEEEEcCchhHHHHHHHHHHHHHHhhCcccCCCeEE
Confidence 55666643 5899999999999999976442 333334444 4778888888999999888775555445 99999999
Q ss_pred EEcCc---cCCchhHHHHHHHHHHcCCEEe-cCc---c-c-------c-----------ccc--c-----C--CCCcccc
Q 006484 548 LVHKD---LACNGALNELVVELQHEGVGLF-GGP---R-A-------S-----------KLL--Q-----I--PETRLFH 592 (643)
Q Consensus 548 ~V~~~---i~~~~f~~~l~~~~~~~~~~~~-g~~---~-~-------~-----------~~~--p-----v--~~~~~~~ 592 (643)
||..+ -. ++|.++|.+++++..-.+- +.. . . . ..+ + | .+.....
T Consensus 238 fv~~g~~~~~-~~f~~~L~~~L~~~~~~~p~~~~s~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~~~~~ 316 (399)
T PF05893_consen 238 FVETGDGDSV-EEFAERLAEALERAAERYPRGELSIDEAAAISSLRAEAELRYALDGEYRVWSSDDNSWTVIVSPEPPLL 316 (399)
T ss_pred EEECCCcccH-HHHHHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHHHHHHHHhcCCcceeecCCCCEEEEECCCcccc
Confidence 99833 23 4788888777765421100 000 0 0 0 000 0 1 1111111
Q ss_pred ccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEecCHHHHHHHHH
Q 006484 593 HEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLC 639 (643)
Q Consensus 593 eE~FgPvl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~~~~~~~ 639 (643)
..-++=.+.|.++++++|++..+|....=-|.+++.. .++...+++
T Consensus 317 ~~pl~r~v~v~~v~~~~e~~~~l~~~~~lQTvgi~~~-~~~~~~~~~ 362 (399)
T PF05893_consen 317 PSPLNRTVYVVPVDSLEELVPYLRPKRGLQTVGIYPW-SERLEELAR 362 (399)
T ss_pred cCCCCCEEEEEEcCCHHHHHHHhhhcCCCeeEEEecC-hhhHHHHHH
Confidence 2223447889999999999999998843135666543 344444444
No 220
>KOG2449 consensus Methylmalonate semialdehyde dehydrogenase [Amino acid transport and metabolism; Carbohydrate transport and metabolism]
Probab=98.46 E-value=5.1e-08 Score=85.23 Aligned_cols=58 Identities=17% Similarity=0.172 Sum_probs=55.1
Q ss_pred CCCccccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEecCHHHHHHHHHhcCC
Q 006484 586 PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDR 643 (643)
Q Consensus 586 ~~~~~~~eE~FgPvl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~~~~~~~~l~~ 643 (643)
|.|.++.||+||||+..+.-+++||||.++|+++||-...|||.|.+.+++|.+..++
T Consensus 76 P~ms~ykeeI~gpVlv~l~~~tldd~I~Iin~nPygn~t~i~Tsn~atark~~~e~~a 133 (157)
T KOG2449|consen 76 PNMSCYKEEIFGPVLVRLETETLDDAIFIINNNPYGNGTAIFTSNGATARKFCHEPDA 133 (157)
T ss_pred CCcceeHhhhhcceEEEEeecCCCceeEEEecCCCCceeEEEecCcHHhhhhhcCCCc
Confidence 6799999999999999999999999999999999999999999999999999987653
No 221
>PF07368 DUF1487: Protein of unknown function (DUF1487); InterPro: IPR009961 This family consists of several uncharacterised proteins from Drosophila melanogaster. The function of this family is unknown.
Probab=97.94 E-value=6.8e-05 Score=72.30 Aligned_cols=123 Identities=15% Similarity=0.165 Sum_probs=87.9
Q ss_pred eEEEcCCCCHHHHHHHHHhhcCCCCCccccceeEEEcCccCCchhHHHHHHHHHHcCC--------------------EE
Q 006484 514 HVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGV--------------------GL 573 (643)
Q Consensus 514 p~iV~~dAdl~~A~~~iv~~~~~n~g~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~--------------------~~ 573 (643)
=+||++|.|++.|+..++.+.- |.=...+.--|+|||++. |+|++++...++.+.- +.
T Consensus 7 lMIvfe~GDlnsA~~~L~~sl~-~Pf~~~~VatVlVqEsir-eefi~rvr~~m~pl~~~va~Hpny~rsl~~i~~l~~~~ 84 (215)
T PF07368_consen 7 LMIVFEDGDLNSAMHYLLESLH-NPFAPGAVATVLVQESIR-EEFIERVRSRMKPLSPQVANHPNYLRSLKKIKCLNAKT 84 (215)
T ss_pred EEEEEeCCCHHHHHHHHHHHHh-CcccCCcEEEEEEeHHHH-HHHHHHHHHhCccCChhhccCcHHHHHHHHHHhcCCeE
Confidence 4899999999999999998843 332344677899999999 7999999988875421 11
Q ss_pred e-cCccccc--ccc--CCCCcccccccc----CceEEEEEeCCHHHHHHHHHcc--CCCceeEEEecCHHHHHHHHHhcC
Q 006484 574 F-GGPRASK--LLQ--IPETRLFHHEYN----SMVCTVEIVDDVRAAIDHIHQH--GSAHTDCIVAEDQKVAETFLCQVD 642 (643)
Q Consensus 574 ~-g~~~~~~--~~p--v~~~~~~~eE~F----gPvl~v~~~~~~deAi~~aN~~--~~GL~a~v~t~d~~~~~~~~~~l~ 642 (643)
+ ++..... --| |.+ +..-+| .+|+++-.|.+..||+++.+.. +|+ |.|||++-.+.+..++.+|.
T Consensus 85 I~~~~~~~~~~aSPilV~d---~~h~~fg~~PTgViTlhtFRt~~Ea~~l~~kE~l~f~-SVsiW~ekla~~Yel~~~l~ 160 (215)
T PF07368_consen 85 IVADFENVPPPASPILVCD---FTHSYFGDGPTGVITLHTFRTPKEAIELCAKETLPFD-SVSIWNEKLASAYELAARLP 160 (215)
T ss_pred EEecccCCCCCCCCEEEcC---CCHHHcCCCCCeEEEEEccCCHHHHHHHHhcCCCCcc-eEEEeCcHHHHHHHHHHhCC
Confidence 1 1100000 002 111 122233 3599999999999999999974 666 99999999999999988775
No 222
>PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=97.92 E-value=3.1e-05 Score=93.91 Aligned_cols=103 Identities=13% Similarity=0.189 Sum_probs=75.3
Q ss_pred CCCeeEEEEeeeeeeEEEEcCCCchhHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccccCcCceEeecCcc
Q 006484 391 ADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTSRE 470 (643)
Q Consensus 391 ~~~~~~~~~~~PlGvv~~I~p~~P~~~~~~~~~AlaaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~alP~g~v~~v~~~~ 470 (643)
+.|........|.|++++|+||+.. ....++.||++||+||+||+++++. .+.. +|..+.+.+.
T Consensus 1067 PTGEsN~L~l~~RG~vlcisp~~~~-~l~Qi~AALaaGn~vi~~~~~~~~~-------~~~~-----Lp~~~~~~~~--- 1130 (1208)
T PRK11905 1067 PTGESNLLSLHPRGRVLCVADTEEA-LLRQLAAALATGNVAVVAADSGLAA-------ALAD-----LPGLVAARID--- 1130 (1208)
T ss_pred CCCcceeEEecCCceEEEECCcHHH-HHHHHHHHHHhCCEEEEeCCcccHH-------HHHh-----Cccccccccc---
Confidence 4455666788999999999999743 4457788999999999999999762 2221 7776666553
Q ss_pred hHhHhhhCCCCccEEEeecCHHHHHHHHHhc----C--CCEEEecC
Q 006484 471 EIPDLLKLDDVIDLVIPRGSNKLVSQIKEST----K--IPVLGHAD 510 (643)
Q Consensus 471 ~~~~~l~~~~~v~~i~fTGs~~~g~~i~~~a----~--~p~~lelG 510 (643)
.++.+.++++|+.|.||||+.+.+.+.++- + .|++.|..
T Consensus 1131 -~~~~~~~~~~i~~V~~~G~~~~a~~i~~~LA~R~G~Ivpliaet~ 1175 (1208)
T PRK11905 1131 -WTQDWEADDPFAGALLEGDAERARAVRQALAARPGAIVPLIAAEP 1175 (1208)
T ss_pred -cccccccCCcccEEEEeCCHHHHHHHHHHHHhCCCCcceEEecCC
Confidence 223455677899999999999999775542 2 55665553
No 223
>PF00815 Histidinol_dh: Histidinol dehydrogenase; InterPro: IPR012131 Histidinol dehydrogenase (HDH) catalyzes the terminal step in the biosynthesis of histidine in bacteria, fungi, and plants, the four-electron oxidation of L-histidinol to histidine. In 4-electron dehydrogenases, a single active site catalyses 2 separate oxidation steps: oxidation of the substrate alcohol to an intermediate aldehyde; and oxidation of the aldehyde to the product acid, in this case His []. The reaction proceeds via a tightly- or covalently-bound inter-mediate, and requires the presence of 2 NAD molecules []. By contrast with most dehydrogenases, the substrate is bound before the NAD coenzyme []. A Cys residue has been implicated in the catalytic mechanism of the second oxidative step []. In bacteria HDH is a single chain polypeptide; in fungi it is the C-terminal domain of a multifunctional enzyme which catalyzes three different steps of histidine biosynthesis; and in plants it is expressed as nuclear encoded protein precursor which is exported to the chloroplast [].; GO: 0004399 histidinol dehydrogenase activity, 0008270 zinc ion binding, 0051287 NAD binding, 0000105 histidine biosynthetic process, 0055114 oxidation-reduction process; PDB: 1KAE_B 1K75_A 1KAH_A 1KAR_B.
Probab=92.86 E-value=10 Score=40.96 Aligned_cols=234 Identities=15% Similarity=0.155 Sum_probs=109.7
Q ss_pred hHHHHHHHHHHHHhcccccc-cccccccccCCCeeEEEEeeeeeeEEEEcCC----CchhHHHHHHHHHHhCCEEE--Ee
Q 006484 362 GKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES----RPDALVQIASLAIRSGNGLL--LK 434 (643)
Q Consensus 362 ~~i~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~----~P~~~~~~~~~AlaaGN~vi--~K 434 (643)
+-++.++++++.|.....+. .... ...+|.....++.|+--|++..|- +|-..++.++||-.||..=| .-
T Consensus 68 ~Ai~~A~~~I~~fh~~q~~~~~~~~---~~~~G~~~g~~~~Pi~rvG~YVPGG~a~~pStvlM~aiPA~vAGV~~Iv~~T 144 (412)
T PF00815_consen 68 EAIEQAAENIRAFHEAQLPKKDWEV---ETEPGVILGQRYRPIERVGLYVPGGRAPYPSTVLMTAIPAKVAGVKEIVVCT 144 (412)
T ss_dssp HHHHHHHHHHHHHHHTT-----EEE---EEETTEEEEEEEEE-SEEEEE---SSS--THHHHHHHHHHHHHT-SEEEEEE
T ss_pred HHHHHHHHHHHHHHHHhcCCCCcEE---EecCCcEEEEEEEEhhheEEEccCCCCCccHHHHHcccchhhcCCCeEEEEc
Confidence 34666777777776433321 1111 113567778899999999999993 45455677899999997544 44
Q ss_pred CCcc----hHHHHHHHHHHHHHhcccccCcCceEeec-CcchHhHhh----hCCCCccEEEeecCHHH--HHHHHHh-cC
Q 006484 435 GGKE----AMRSNAILHKVITSAIPDTVGEKLIGLVT-SREEIPDLL----KLDDVIDLVIPRGSNKL--VSQIKES-TK 502 (643)
Q Consensus 435 ps~~----tp~t~~~~~~l~~~a~~~alP~g~v~~v~-~~~~~~~~l----~~~~~v~~i~fTGs~~~--g~~i~~~-a~ 502 (643)
|... .|.+ ++- .+. .|+=.+.. |+...-..| ..=|+||+|+==|..=+ +|+.... .+
T Consensus 145 Pp~~~G~i~p~v---L~A-a~~-------~Gv~evy~vGGaqAIAAlAyGTeti~~VDkIvGPGN~yV~~AK~~v~g~V~ 213 (412)
T PF00815_consen 145 PPPKDGKINPAV---LAA-AHL-------AGVDEVYKVGGAQAIAALAYGTETIPKVDKIVGPGNAYVTAAKRLVFGDVG 213 (412)
T ss_dssp -SS------HHH---HHH-HHH-------TT-SEEEE--HHHHHHHHHH--SSS---SEEE---SHHHHHHHHHHHHS-E
T ss_pred CCCccCCCCHHH---HHH-HHH-------cCCCEEEecccHHHHHHHHcCCCCCCceeEEECCCcHHHHHHHHHhcCCcc
Confidence 4332 2322 111 111 24445554 554322222 12368999988887543 3333222 12
Q ss_pred CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccccceeEEEcCccCCchhHHHHHHHHHHcCCEEecCccccc
Q 006484 503 IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASK 581 (643)
Q Consensus 503 ~p~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g-~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~~~~g~~~~~~ 581 (643)
+-.+ .+-.---+|-|++||.+..+.+++.=+=.... .| ++|..| +++.+++.++++++--.+
T Consensus 214 ID~~-AGPSEv~ViAD~~A~p~~vAaDLLaQAEHd~~a~~-----vLvt~s---~~la~~V~~~v~~~l~~l-------- 276 (412)
T PF00815_consen 214 IDMI-AGPSEVLVIADETANPEFVAADLLAQAEHDPDAQA-----VLVTTS---EELAEAVEAEVERQLEEL-------- 276 (412)
T ss_dssp ES-------EEEEEE-TTS-HHHHHHHHHHHHTT-TT-EE-----EEEES----HHHHHHHHHHHHHHHTT---------
T ss_pred cCCC-CCCCceEEEECCCCCHHHHHHHHHHHhccCCCCce-----EEEECC---HHHHHHHHHHHHHHHHhC--------
Confidence 2211 11112235567889999988877754433322 22 455444 356666666655420000
Q ss_pred cccCCCCccccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEecCHHH
Q 006484 582 LLQIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKV 633 (643)
Q Consensus 582 ~~pv~~~~~~~eE~FgPvl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~ 633 (643)
+...+. ++.+. --.++.++|++||++++|..--= -..|.+.|...
T Consensus 277 ----~r~~i~-~~sl~-~g~ii~~~~l~ea~~~~N~~APE-HLel~~~~~~~ 321 (412)
T PF00815_consen 277 ----PRREIA-EKSLE-NGAIIVVDSLEEAIELANEYAPE-HLELQVEDPEE 321 (412)
T ss_dssp ----TTHHHH-HHHHT-T-EEEE-SSHHHHHHHHHHH--S-EEEEESTTHHH
T ss_pred ----CchHHH-HHHHH-CCeEEEECCHHHHHHHHHHhhHH-HHHHHHcCHHH
Confidence 111111 22223 23466789999999999996533 45777777753
No 224
>cd06572 Histidinol_dh Histidinol dehydrogenase, HisD, E.C 1.1.1.23. Histidinol dehydrogenase catalyzes the last two steps in the L-histidine biosynthesis pathway, which is conserved in bacteria, archaea, fungi, and plants. These last two steps are (i) the NAD-dependent oxidation of L-histidinol to L-histidinaldehyde, and (ii) the NAD-dependent oxidation of L-histidinaldehyde to L-histidine. In most fungi and in the unicellular choanoflagellate Monosiga bevicollis, the HisD domain is fused with units that catalyze the second and third biosynthesis steps in this same pathway.
Probab=91.27 E-value=24 Score=37.93 Aligned_cols=235 Identities=14% Similarity=0.162 Sum_probs=124.3
Q ss_pred HHHHHHHHHHHHhcccccccccccccccCCCeeEEEEeeeeeeEEEEcCC----CchhHHHHHHHHHHhCCEEE--EeCC
Q 006484 363 KISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES----RPDALVQIASLAIRSGNGLL--LKGG 436 (643)
Q Consensus 363 ~i~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~----~P~~~~~~~~~AlaaGN~vi--~Kps 436 (643)
-++.+.++++.|.....+...... ..+|.....++.|+--|++..|- +|-..++.++||-.||+.=| .-|.
T Consensus 56 ai~~A~~nI~~fh~~q~~~~~~~~---~~~G~~~g~~~~Pi~~vG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp 132 (390)
T cd06572 56 AIELAAENIRAFHEAQLPKDWEVE---TEPGVVLGQRYRPIERVGLYVPGGTAPYPSTVLMLAIPAKVAGVKEIVVVTPP 132 (390)
T ss_pred HHHHHHHHHHHHHHHhCCCCeEEE---eCCCcEEEEEEEehhEEEEEecCCCCcchHHHHHhhcchhhcCCCeEEEEeCc
Confidence 456666777777643322211111 12467778899999999999993 45455677889999998644 4444
Q ss_pred c----chHHHHHHHHHHHHHhcccccCcCceEeec-CcchHhHhh----hCCCCccEEEeecCHHH--HHHHHHh-cCCC
Q 006484 437 K----EAMRSNAILHKVITSAIPDTVGEKLIGLVT-SREEIPDLL----KLDDVIDLVIPRGSNKL--VSQIKES-TKIP 504 (643)
Q Consensus 437 ~----~tp~t~~~~~~l~~~a~~~alP~g~v~~v~-~~~~~~~~l----~~~~~v~~i~fTGs~~~--g~~i~~~-a~~p 504 (643)
. -.|.+ +..+++ .|+-.+.. |+...-..| ..-|.||+|+=-|..=+ +|+.... .++-
T Consensus 133 ~~~g~i~p~i-L~aa~~----------~Gv~eiy~vGGaQAIAAlAyGTesi~~VDkIvGPGN~yV~~AK~~v~g~V~ID 201 (390)
T cd06572 133 RKDGKINPAI-LAAAKL----------AGVDEIYKVGGAQAIAALAYGTETIPKVDKIVGPGNIYVTAAKRLVSGDVGID 201 (390)
T ss_pred CCCCCCCHHH-HHHHHH----------cCCcEEeccCCHHHHHHHHcCCcCCCCCCEeeCCchHHHHHHHHHhcCCcCcc
Confidence 2 23332 112222 24445554 554332222 23578999988887544 2322111 1121
Q ss_pred EEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCCccccceeEEEcCccCCchhHHHHHHHHHHcCCEEecCcccccccc
Q 006484 505 VLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLQ 584 (643)
Q Consensus 505 ~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~~~~g~~~~~~~~p 584 (643)
.+ .+..---+|.|++||.+..+.+++.=+=.... ..-++|..| .++.+++.+++++.-..+
T Consensus 202 ~~-AGPSEvlIiAD~~A~p~~vAaDLLaQAEH~~~----a~aiLvT~s---~~la~~V~~~v~~ql~~l----------- 262 (390)
T cd06572 202 MP-AGPSEVLVIADETANPEFVAADLLSQAEHDPD----SQAILVTTS---EELAEAVEEEVERQLAEL----------- 262 (390)
T ss_pred CC-CCCceEEEEeCCCCCHHHHHHHHHhhhccCCC----CeEEEEECC---HHHHHHHHHHHHHHHHhC-----------
Confidence 11 12112235556779999988877754333211 112455443 356666666555421000
Q ss_pred CCCCccccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEecCHHH
Q 006484 585 IPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKV 633 (643)
Q Consensus 585 v~~~~~~~eE~FgPvl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~ 633 (643)
+...+..+.+ .---.++-++|++||++++|..--= -..|+++|...
T Consensus 263 -~r~~~~~~~~-~~~g~ii~~~~~~eai~~~N~~APE-HLel~~~~~~~ 308 (390)
T cd06572 263 -PRREIAAKSL-LDYGAIILVDDLEEAIELANEYAPE-HLELQTEDPEE 308 (390)
T ss_pred -CcHHHHHHHH-HhCCEEEEECCHHHHHHHHHhhchh-hheeHhcCHHH
Confidence 1111111111 1112346689999999999985432 34566666653
No 225
>COG0141 HisD Histidinol dehydrogenase [Amino acid transport and metabolism]
Probab=90.20 E-value=30 Score=37.29 Aligned_cols=233 Identities=13% Similarity=0.184 Sum_probs=126.3
Q ss_pred HHHHHHHHHHHHhcccccccccccccccCCCeeEEEEeeeeeeEEEEcCC----CchhHHHHHHHHHHhCCEE--EEeCC
Q 006484 363 KISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES----RPDALVQIASLAIRSGNGL--LLKGG 436 (643)
Q Consensus 363 ~i~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~----~P~~~~~~~~~AlaaGN~v--i~Kps 436 (643)
-++.++++++.+.....+..... ...+|.....++.|+--|++..|- +|-..++...||-.||+-= +.-|.
T Consensus 80 ai~~A~~~I~~fH~~Q~p~~~~~---~~~~Gv~~g~~~~Pi~~VGlYVPGG~A~ypStvLM~avPAkvAGv~~Iv~~tPp 156 (425)
T COG0141 80 ALEVAAENIEAFHEAQLPKDWLV---ETEPGVVLGQRWRPIERVGLYVPGGKAAYPSTVLMNAVPAKVAGVEEIVVVTPP 156 (425)
T ss_pred HHHHHHHHHHHHHHhhCCCccce---eccCCcEEEEEEEEhhheEEEccCCCcCChHHHHHhhccHhhcCCceEEEECCC
Confidence 45666677776653222211111 113567777889999999999992 5666667788999999864 44444
Q ss_pred cc---hHHHHHHHHHHHHHhcccccCcCceEeec-CcchHhHhhhCC----CCccEEEeecCHHH--HHHHHHh-cCCCE
Q 006484 437 KE---AMRSNAILHKVITSAIPDTVGEKLIGLVT-SREEIPDLLKLD----DVIDLVIPRGSNKL--VSQIKES-TKIPV 505 (643)
Q Consensus 437 ~~---tp~t~~~~~~l~~~a~~~alP~g~v~~v~-~~~~~~~~l~~~----~~v~~i~fTGs~~~--g~~i~~~-a~~p~ 505 (643)
.. .|.+ +..++++ |+=.+.. |+...-.+|.-- |.||+|+==|..-+ +|+.... .++-.
T Consensus 157 ~~~gv~p~i-L~AA~~~----------Gv~eIy~vGGAQAIAAlAYGTetV~~VdkIvGPGN~yVtaAKr~v~g~V~ID~ 225 (425)
T COG0141 157 PKDGVNPEI-LAAARLA----------GVDEVYKVGGAQAIAALAYGTETVPKVDKIVGPGNAYVTAAKRLVSGVVGIDM 225 (425)
T ss_pred CCCCCCHHH-HHHHHHh----------CcHHHHHccCHHHHHHHHccCCcCCccCeeeCCCcHHHHHHHHHhhCCcccCC
Confidence 43 3332 2222221 3323333 544333333322 67999988887644 2322221 12222
Q ss_pred EEecCccceEEEcCCCCHHHHHHHHHhhcCCCCCccccceeEEEcCccCCchhHHHHHHHHHHcCCEEecCccccccccC
Q 006484 506 LGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLQI 585 (643)
Q Consensus 506 ~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~~~~g~~~~~~~~pv 585 (643)
+ .+-..--+|-|++||.+..+.+++.-+=.... .+-++|..| ++|.+++.+++.+.--.+
T Consensus 226 ~-AGPSEvlViAD~ta~p~~vA~DLLsQAEHd~~----a~aiLvT~s---~~la~~v~~~v~~~l~~l------------ 285 (425)
T COG0141 226 I-AGPSEVLVIADETANPDFVAADLLSQAEHDPD----AQAILVTDS---EELAEAVEAAVERQLETL------------ 285 (425)
T ss_pred C-CCCceEEEEeCCCCCHHHHHHHHHHHhhcCCC----ceEEEEeCc---HHHHHHHHHHHHHHHHhc------------
Confidence 1 11112234556679999988887754433221 123566554 467666666655431000
Q ss_pred CCCccccc--cccCceEEEEEeCCHHHHHHHHHccCCCceeEEEecCHHH
Q 006484 586 PETRLFHH--EYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKV 633 (643)
Q Consensus 586 ~~~~~~~e--E~FgPvl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~ 633 (643)
+..++..+ +-|| .|+-++|+|||++++|..-- --..|.++|+..
T Consensus 286 ~~~ei~~~~l~~~g---~iilv~~l~ea~~~~N~~AP-EHLei~~~~p~~ 331 (425)
T COG0141 286 PRAEIARKALENYG---AIILVDDLDEAVEISNEYAP-EHLELQTENPRE 331 (425)
T ss_pred cHHHHHHHHHHhCC---eEEEECCHHHHHHHHHhhCh-HhhhhhhcCHHH
Confidence 11011111 1344 46678999999999998653 344667777653
No 226
>PLN02926 histidinol dehydrogenase
Probab=88.54 E-value=41 Score=36.59 Aligned_cols=233 Identities=14% Similarity=0.143 Sum_probs=123.6
Q ss_pred HHHHHHHHHHHHhcccccccc-cccccccCCCeeEEEEeeeeeeEEEEcCC----CchhHHHHHHHHHHhCCEE--EEeC
Q 006484 363 KISSLAKSIRILADMEEPIGQ-ILKRTELADGLILEKTSCPLGVLLIVFES----RPDALVQIASLAIRSGNGL--LLKG 435 (643)
Q Consensus 363 ~i~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~PlGvv~~I~p~----~P~~~~~~~~~AlaaGN~v--i~Kp 435 (643)
-++.+.++++.|.....+... .. ...+|.....++.|+.-|++..|. +|-..++.++||-.||+.= +.-|
T Consensus 83 ai~~A~~nI~~fh~~q~~~~~~~~---~~~~Gv~~g~~~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TP 159 (431)
T PLN02926 83 AFDVAYDNIYAFHLAQKSTEKLEV---ETMPGVRCRRVARPIGAVGLYVPGGTAVLPSTALMLAVPAQIAGCKTVVLATP 159 (431)
T ss_pred HHHHHHHHHHHHHHHhCCCCcceE---ecCCCeEEEEEEechHHeeEeccCCCCCccHHHHHhhcchhhcCCCeEEEEEC
Confidence 455666777776543222111 11 013567777889999999999994 4545567789999999764 4445
Q ss_pred Ccc----hHHHHHHHHHHHHHhcccccCcCceEeec-CcchHhHhh----hCCCCccEEEeecCHHH--HHHHHHhcCC-
Q 006484 436 GKE----AMRSNAILHKVITSAIPDTVGEKLIGLVT-SREEIPDLL----KLDDVIDLVIPRGSNKL--VSQIKESTKI- 503 (643)
Q Consensus 436 s~~----tp~t~~~~~~l~~~a~~~alP~g~v~~v~-~~~~~~~~l----~~~~~v~~i~fTGs~~~--g~~i~~~a~~- 503 (643)
... .|.+ |+ ..+. .|+=.+.. |+...-..| ..=|+||+|+=-|..=+ +|+... +.
T Consensus 160 p~~~g~i~p~i---L~-AA~~-------~Gv~eIy~vGGaQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~--G~~ 226 (431)
T PLN02926 160 PRKDGSICPEV---LY-CAKK-------AGVTHILKAGGAQAIAAMAWGTDSCPKVDKIFGPGNQYVTAAKMILQ--NSE 226 (431)
T ss_pred CCcCCCCCHHH---HH-HHHH-------cCCCeeeccCCHHHHHHHHcCCCCCCCCCEEECCCcHHHHHHHHHhh--CCC
Confidence 432 3332 22 1111 34444554 554322222 23468999988887644 333211 22
Q ss_pred --CEEEecCccc--eEEEcCCCCHHHHHHHHHhhcCCCCCccccceeEEEcCccCCchhHHHHHHHHHHcCCEEecCccc
Q 006484 504 --PVLGHADGIC--HVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRA 579 (643)
Q Consensus 504 --p~~lelGG~~--p~iV~~dAdl~~A~~~iv~~~~~n~g~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~~~~g~~~~ 579 (643)
.-+=-.-|-+ -+|-|++||.+.++.+++.=+=.... ..-++|..+ .++.+++.++++++-..+
T Consensus 227 ~~VgID~~AGPSEvlIiAD~tA~p~~vAaDLLaQAEHdp~----a~aiLvT~s---~~la~~V~~~v~~ql~~l------ 293 (431)
T PLN02926 227 AMVSIDMPAGPSEVLVIADKTANPVHVAADLLSQAEHGPD----SQVVLVAVG---DVDLDAIEEEVEKQCQSL------ 293 (431)
T ss_pred CccccCCCCCCceeEEEeCCCCCHHHHHHHHHHHhccCCC----CcEEEEECC---HHHHHHHHHHHHHHHHhC------
Confidence 1111112322 24446679999988887754333221 112445443 245555555554320000
Q ss_pred cccccCCCCccccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEecCHHH
Q 006484 580 SKLLQIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKV 633 (643)
Q Consensus 580 ~~~~pv~~~~~~~eE~FgPvl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~ 633 (643)
+...+. ++.+.. -.++-++|+|||++++|..--= -..|+++|...
T Consensus 294 ------~r~~i~-~~sl~~-g~iivv~~l~ea~~~~N~~APE-HLei~~~~~~~ 338 (431)
T PLN02926 294 ------PRGEIA-SKALGH-SFIVVARDMAEAISFSNLYAPE-HLIVNVEDAES 338 (431)
T ss_pred ------ChHHHH-HHHHHC-CEEEEECCHHHHHHHHHhhChH-hheehhcCHHH
Confidence 111111 222222 3557789999999999985432 33567777643
No 227
>PRK00877 hisD bifunctional histidinal dehydrogenase/ histidinol dehydrogenase; Reviewed
Probab=86.97 E-value=50 Score=35.88 Aligned_cols=235 Identities=16% Similarity=0.179 Sum_probs=123.5
Q ss_pred HHHHHHHHHHHHhcccccccccccccccCCCeeEEEEeeeeeeEEEEcCC----CchhHHHHHHHHHHhCCEEE--EeCC
Q 006484 363 KISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES----RPDALVQIASLAIRSGNGLL--LKGG 436 (643)
Q Consensus 363 ~i~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~----~P~~~~~~~~~AlaaGN~vi--~Kps 436 (643)
-++.+.++++.|.....+..... ...+|.....++.|+--|++..|. +|-..++.++||-.||+.=| .-|.
T Consensus 84 ai~~A~~~I~~Fh~~q~~~~~~~---~~~~Gv~~g~~~~Pi~~vG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp 160 (425)
T PRK00877 84 ALEEAAENIRAFHEAQKPESWDV---ETAPGVRLGQRWRPIERVGLYVPGGKAAYPSSVLMNAIPAKVAGVKEIVMVTPP 160 (425)
T ss_pred HHHHHHHHHHHHHHHhCCCCeEE---EecCCeEEEEEEEehHHeEEEccCCCCCchHHHHHhhcchhhcCCCeEEEEeCC
Confidence 45666677777754333211111 013566777889999999999994 45555677899999998644 4444
Q ss_pred c---chHHHHHHHHHHHHHhcccccCcCceEeec-CcchHhHhh----hCCCCccEEEeecCHHH--HHHHHHh-cCCCE
Q 006484 437 K---EAMRSNAILHKVITSAIPDTVGEKLIGLVT-SREEIPDLL----KLDDVIDLVIPRGSNKL--VSQIKES-TKIPV 505 (643)
Q Consensus 437 ~---~tp~t~~~~~~l~~~a~~~alP~g~v~~v~-~~~~~~~~l----~~~~~v~~i~fTGs~~~--g~~i~~~-a~~p~ 505 (643)
. -.|.+ +..+++ .|+=.+.. |+...-..| ..=|.||+|+=-|..=| +|+.... .++-.
T Consensus 161 ~~g~i~p~v-L~AA~~----------~Gv~eIy~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~g~V~ID~ 229 (425)
T PRK00877 161 PDGEINPAI-LAAAAL----------AGVDEVYKVGGAQAIAALAYGTESIPKVDKIVGPGNIYVTAAKRLVFGVVGIDM 229 (425)
T ss_pred CCCCCCHHH-HHHHHH----------cCCCeeeccCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHHcCCcCcCC
Confidence 2 23332 111222 24444444 554322222 23468999988887543 3432211 12222
Q ss_pred EEecCccceEEEcCCCCHHHHHHHHHhhcCCCCCccccceeEEEcCccCCchhHHHHHHHHHHcCCEEecCccccccccC
Q 006484 506 LGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLQI 585 (643)
Q Consensus 506 ~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~~~~g~~~~~~~~pv 585 (643)
+ .+-.---+|-|++||.+..+.+++.=+=.... .+-++|..| .++.+++.+++++.-..+ ++. .+
T Consensus 230 ~-AGPSEvlViAD~~Anp~~vAaDLLaQAEHd~~----a~aiLvT~s---~~la~~V~~~v~~ql~~l---~r~-~i--- 294 (425)
T PRK00877 230 I-AGPSEILVIADETADPDFVAADLLSQAEHDPD----AQSILVTTS---EELAEAVAAEVERQLATL---PRA-EI--- 294 (425)
T ss_pred C-CCCceeEEEeCCCCCHHHHHHHHHHHhccCCC----CcEEEEECC---HHHHHHHHHHHHHHHHhC---ChH-HH---
Confidence 1 11111224446679999988887754433221 112444333 345555555554321000 100 00
Q ss_pred CCCccccccccCceEEEEEeCCHHHHHHHHHccCCCceeEEEecCHHH
Q 006484 586 PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKV 633 (643)
Q Consensus 586 ~~~~~~~eE~FgPvl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~ 633 (643)
....+ |-||= ++-++|+|||++++|..--= -..|.++|...
T Consensus 295 -a~~sl--~~~g~---iivv~~leeai~~~N~~APE-HLel~~~~p~~ 335 (425)
T PRK00877 295 -ARASL--EGQGA---IILVDDLEEAIELSNAYAPE-HLEIQTEDPRA 335 (425)
T ss_pred -HHHHH--HhCCE---EEEECCHHHHHHHHHhhChH-heeehhCCHHH
Confidence 00112 22554 45689999999999985533 34577777643
No 228
>PRK13770 histidinol dehydrogenase; Provisional
Probab=86.42 E-value=53 Score=35.57 Aligned_cols=231 Identities=11% Similarity=0.100 Sum_probs=121.1
Q ss_pred HHHHHHHHHHHHhcccccccccccccccCCCeeEEEEeeeeeeEEEEcCC----CchhHHHHHHHHHHhCCEEEEe--CC
Q 006484 363 KISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES----RPDALVQIASLAIRSGNGLLLK--GG 436 (643)
Q Consensus 363 ~i~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~----~P~~~~~~~~~AlaaGN~vi~K--ps 436 (643)
-++.+.++++.|.....+.. |....|.....++.|+--|++..|- +|-..++.++||-.||+.=|+= |.
T Consensus 76 ai~~A~~nI~~fh~~q~~~~-----~~~~~gv~~g~~~~Pi~rvGlYVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp 150 (416)
T PRK13770 76 ALQQSYERIKAYQESIKQTN-----QQLEESVECYEIYHPLESVGIYVPGGKASYPSTVLMTATLAQVAGVENIVVVTPP 150 (416)
T ss_pred HHHHHHHHHHHHHHHhCCCC-----eEecCCcEEEEEEeeeeeeEEEccCCCCCccHHHHHhhccHhhcCCCeEEEEeCc
Confidence 45566677777654322211 1123456667889999999999993 4545567789999999875554 43
Q ss_pred cc---hHHHHHHHHHHHHHhcccccCcCceEeec-CcchHhHhh----hCCCCccEEEeecCHHH--HHHHHH-hcCCCE
Q 006484 437 KE---AMRSNAILHKVITSAIPDTVGEKLIGLVT-SREEIPDLL----KLDDVIDLVIPRGSNKL--VSQIKE-STKIPV 505 (643)
Q Consensus 437 ~~---tp~t~~~~~~l~~~a~~~alP~g~v~~v~-~~~~~~~~l----~~~~~v~~i~fTGs~~~--g~~i~~-~a~~p~ 505 (643)
.. .|.+ +..+++ .|+=.+.. |+...-..| ..=|+||+|+==|..=+ +|+... ..++-.
T Consensus 151 ~~~~i~p~i-L~Aa~~----------~Gv~eIy~iGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~g~V~ID~ 219 (416)
T PRK13770 151 QPNGVSQEV-LAACYI----------TQVNQVFQVGGAQSIAALTYGTETIPKVDKIVGPGNQFVAYAKKYLFGQVGIDQ 219 (416)
T ss_pred CCCCCCHHH-HHHHHH----------cCCCeeeccCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhcCCcCcCC
Confidence 22 3332 112222 24444444 543322222 23468999987776543 233211 112222
Q ss_pred EEecCccceEEEcCCCCHHHHHHHHHhhcCCCCCccccceeEEEcCccCCchhHHHHHHHHHHcCCEEecCccccccccC
Q 006484 506 LGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLQI 585 (643)
Q Consensus 506 ~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~~~~g~~~~~~~~pv 585 (643)
+ .+-.---+|-|++||.+..+.+++.=+=.... ..-++|..| .++.+++.+++++.--.+
T Consensus 220 ~-AGPSEvlViAD~~Anp~~iAaDLLaQAEHd~~----a~~iLvT~s---~~la~~V~~ev~~ql~~l------------ 279 (416)
T PRK13770 220 I-AGPTEIALIIDETADLDAIVYDVFAQAEHDEL----ARTYVISED---AQVLKDLESRIAKALPNV------------ 279 (416)
T ss_pred C-CCCceeEEEecCCCCHHHHHHHHHHHhccCCC----CcEEEEeCC---HHHHHHHHHHHHHHHHhC------------
Confidence 2 12222235556779999988877754333221 112344333 244445544444320000
Q ss_pred CCCccccc--cccCceEEEEEeCCHHHHHHHHHccCCCceeEEEecCHHH
Q 006484 586 PETRLFHH--EYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKV 633 (643)
Q Consensus 586 ~~~~~~~e--E~FgPvl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~ 633 (643)
|...+.++ +-|| .++-++|+|||++++|..-.= -..|.++|...
T Consensus 280 pr~~i~~~al~~~g---~ii~v~~~eeai~~~N~~APE-HLel~~~~~~~ 325 (416)
T PRK13770 280 DRYDIVSKSIANQH---YLIHASNFDEACHVMNTIAPE-HASIQTVNPQP 325 (416)
T ss_pred ChHHHHHHHHHhCC---EEEEECCHHHHHHHHHhhChH-hheehhCCHHH
Confidence 11111111 2244 345689999999999986533 23467777643
No 229
>TIGR00069 hisD histidinol dehydrogenase. This model describes a polypeptide sequence catalyzing the final step in histidine biosynthesis, found sometimes as an independent protein and sometimes as a part of a multifunctional protein.
Probab=86.23 E-value=45 Score=35.84 Aligned_cols=233 Identities=15% Similarity=0.166 Sum_probs=122.7
Q ss_pred HHHHHHHHHHHHhcccccccccccccccCCCeeEEEEeeeeeeEEEEcCC----CchhHHHHHHHHHHhCCEEEE--eCC
Q 006484 363 KISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES----RPDALVQIASLAIRSGNGLLL--KGG 436 (643)
Q Consensus 363 ~i~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~----~P~~~~~~~~~AlaaGN~vi~--Kps 436 (643)
-++.+.++++.|.....+..... ...+|.....++.|+--|++..|. +|-..++.++||-.||+.=|+ -|.
T Consensus 52 ai~~A~~~I~~fh~~q~~~~~~~---~~~~Gv~~g~~~~Pi~rvGlYVPGG~a~~pStvLM~aiPAkvAGV~~Iv~~TPp 128 (393)
T TIGR00069 52 ALELAAENIRAFHEAQLPRSWEV---ETEPGVILGQRVRPLERVGLYVPGGRAPYPSTVLMTAIPAKVAGVKEIVVCTPP 128 (393)
T ss_pred HHHHHHHHHHHHHHHhCCCCeEE---ecCCCeEEEEEEEEeheEEEEeCCCCCcchHHHHHhhcchhhcCCCeEEEEeCC
Confidence 45556666666653322221111 113567777899999999999994 454556778899999986444 444
Q ss_pred c----chHHHHHHHHHHHHHhcccccCcCceEeec-CcchHhHhh----hCCCCccEEEeecCHHH--HHHHHH-hcCCC
Q 006484 437 K----EAMRSNAILHKVITSAIPDTVGEKLIGLVT-SREEIPDLL----KLDDVIDLVIPRGSNKL--VSQIKE-STKIP 504 (643)
Q Consensus 437 ~----~tp~t~~~~~~l~~~a~~~alP~g~v~~v~-~~~~~~~~l----~~~~~v~~i~fTGs~~~--g~~i~~-~a~~p 504 (643)
. -.|.+ +..+++ .|+=.+.. |+...-..| .+=|+||+|+=-|..=+ +|+... ..++-
T Consensus 129 ~~~g~i~p~i-L~AA~~----------~Gv~eIy~vGGAQAIAAlAyGTesIp~VDkIvGPGN~yV~~AK~~v~g~V~ID 197 (393)
T TIGR00069 129 GKDGKINPAV-LAAAKL----------AGVDEVYKVGGAQAIAALAYGTETVPKVDKIVGPGNIYVTAAKKLVFGDVGID 197 (393)
T ss_pred CcCCCCCHHH-HHHHHH----------cCCCeehhcCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhcCccCcC
Confidence 2 23332 111222 24444444 544322222 23468999988887644 333211 11222
Q ss_pred EEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCCccccceeEEEcCccCCchhHHHHHHHHHHcCCEEecCcccccccc
Q 006484 505 VLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLQ 584 (643)
Q Consensus 505 ~~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~~~~g~~~~~~~~p 584 (643)
.+ .+-.---+|-|++||.+..+.+++.=+=.... .+-++|..| .++.+++.+++++.-..+
T Consensus 198 ~~-AGPSEvlViAD~~Anp~~iAaDLLaQAEHd~~----a~~iLvT~s---~~la~~V~~~v~~ql~~l----------- 258 (393)
T TIGR00069 198 MP-AGPSEVLVIADETANPEFVAADLLSQAEHDPD----AQAILVTTS---EELAEAVQEEIERQLATL----------- 258 (393)
T ss_pred CC-CCCceEEEEeCCCCCHHHHHHHHHHHhccCCC----CcEEEEECC---HHHHHHHHHHHHHHHHhC-----------
Confidence 21 12122235556779999988877754433221 112445333 345555555554321000
Q ss_pred CCCCccccc--cccCceEEEEEeCCHHHHHHHHHccCCCceeEEEecCHHH
Q 006484 585 IPETRLFHH--EYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKV 633 (643)
Q Consensus 585 v~~~~~~~e--E~FgPvl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~ 633 (643)
+...+.++ +-+|= ++-++|+|||++++|..--= -..|+++|...
T Consensus 259 -~r~~i~~~al~~~g~---ii~v~~l~ea~~~~N~~APE-HLel~~~~p~~ 304 (393)
T TIGR00069 259 -PRREIARKSLEDNGA---IILVDDLEEAIEISNDYAPE-HLELQTKNPEE 304 (393)
T ss_pred -ChHHHHHHHHHhCCE---EEEECCHHHHHHHHHhhChH-hheehhCCHHH
Confidence 11112111 11443 46689999999999985533 33567777643
No 230
>PRK12447 histidinol dehydrogenase; Reviewed
Probab=82.99 E-value=76 Score=34.54 Aligned_cols=234 Identities=13% Similarity=0.103 Sum_probs=122.4
Q ss_pred HHHHHHHHHHHHhcccccccccccccccCCCeeEEEEeeeeeeEEEEcCC----CchhHHHHHHHHHHhCCEEEE--eCC
Q 006484 363 KISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES----RPDALVQIASLAIRSGNGLLL--KGG 436 (643)
Q Consensus 363 ~i~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~----~P~~~~~~~~~AlaaGN~vi~--Kps 436 (643)
-++.+.++++.|.....+....... ...+|.....++.|+--|++..|- +|-..++.++||-.||+.=|+ -|.
T Consensus 77 ai~~A~~nI~~fh~~q~~~~~~~~~-~~~~Gv~~g~~~~Pl~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp 155 (426)
T PRK12447 77 DIRFAQDQVRRFAEAQRDSLQDLEV-ETLPGVILGHRNIPVNSVGCYVPGGRYPLVASAHMSVLTAKVAGVKRVIACTPP 155 (426)
T ss_pred HHHHHHHHHHHHHHHhcCCCCceEE-ecCCCeEEEEEEeehheEEEEeCCCCCcchHHHHHhhcchhhcCCCeEEEEeCC
Confidence 4556667777765332221100100 113566777889999999999993 454556778899999986444 444
Q ss_pred cc---hHHHHHHHHHHHHHhcccccCcCceEeec-CcchHhHhh----hCCCCccEEEeecCHHH--HHHHHH-hcCCCE
Q 006484 437 KE---AMRSNAILHKVITSAIPDTVGEKLIGLVT-SREEIPDLL----KLDDVIDLVIPRGSNKL--VSQIKE-STKIPV 505 (643)
Q Consensus 437 ~~---tp~t~~~~~~l~~~a~~~alP~g~v~~v~-~~~~~~~~l----~~~~~v~~i~fTGs~~~--g~~i~~-~a~~p~ 505 (643)
.. .|.+ +..+++ .|+=.+.. |+...-..| .+=|.||+|+=-|..=+ +|+... ..++-.
T Consensus 156 ~~~~i~p~i-L~Aa~~----------~Gv~eIy~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~g~V~ID~ 224 (426)
T PRK12447 156 FPGEPPPAI-VAAMHL----------AGADEIYVLGGVQAVAAMAYGTETIKPVDMLVGPGNAYVAEAKRQLFGRVGIDL 224 (426)
T ss_pred CCCCCCHHH-HHHHHH----------cCCCeehhcCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhcCccCcCC
Confidence 32 2322 111111 34444444 543322222 23468999988887644 333211 112222
Q ss_pred EEecCccceEEEcCCCCHHHHHHHHHhhcCCCCCccccceeEEEcCccCCchhHHHHHHHHHHcCCEEecCccccccccC
Q 006484 506 LGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLQI 585 (643)
Q Consensus 506 ~lelGG~~p~iV~~dAdl~~A~~~iv~~~~~n~g~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~~~~g~~~~~~~~pv 585 (643)
+ .+-.---+|-|++||.+..+.+++.=+=.... ..-++|..| .++.+++.+++++.-..+
T Consensus 225 ~-AGPSEvlViAD~~Anp~~vAaDLLaQAEHd~~----a~~iLvT~s---~~la~~V~~~v~~ql~~l------------ 284 (426)
T PRK12447 225 F-AGPTETLVIADDTADPELVATDLLGQAEHGPN----SPAVLITTS---RKLAEEVLAEIERLLAIL------------ 284 (426)
T ss_pred C-CCCceeEEEeCCCCCHHHHHHHHHHHhccCCC----CceEEEECC---HHHHHHHHHHHHHHHHhC------------
Confidence 2 12112234556779999988877754433221 112445433 345555555554321000
Q ss_pred CCCccccc--cccCceEEEEEeCCHHHHHHHHHccCCCceeEEEecCHH
Q 006484 586 PETRLFHH--EYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQK 632 (643)
Q Consensus 586 ~~~~~~~e--E~FgPvl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~ 632 (643)
+...+.++ +-+|= ++-++|+|||++++|..--= -..|.++|..
T Consensus 285 ~r~~i~~~sl~~~g~---ii~v~~l~ea~~~~N~~APE-HLel~~~~~~ 329 (426)
T PRK12447 285 PTADVASAAWRDYGE---VILCDDLEEMVAEADRYASE-HVQVMTEDPD 329 (426)
T ss_pred CHHHHHHHHHHhCCE---EEEECCHHHHHHHHHhhChH-heeehhCCHH
Confidence 11111111 22443 45689999999999985533 3356777764
No 231
>PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=82.46 E-value=3.1 Score=51.64 Aligned_cols=93 Identities=13% Similarity=0.104 Sum_probs=62.5
Q ss_pred CCCeeEEEEeeeeeeEEEEcCCCchhHHHHHHHHHHhCCEEEEeCCcchHHHHHHHHHHHHHhcccccCcCceEeecCcc
Q 006484 391 ADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTSRE 470 (643)
Q Consensus 391 ~~~~~~~~~~~PlGvv~~I~p~~P~~~~~~~~~AlaaGN~vi~Kps~~tp~t~~~~~~l~~~a~~~alP~g~v~~v~~~~ 470 (643)
|.|......-.|.|+|+++.+... -....++.++++||.||+..++..+ +++.. ||+.+.+.+.-.
T Consensus 1176 PTGE~N~l~l~pRg~vLcl~~~~~-~~~~Ql~Aala~Gn~~v~~~~~~~~-------~~~~~-----Lp~~v~~~v~~~- 1241 (1318)
T PRK11809 1176 PTGERNTYTLLPRERVLCLADTEQ-DALTQLAAVLAVGSQALWPDDALHR-------ALVAA-----LPAAVQARIQLA- 1241 (1318)
T ss_pred CCCCcceeeccCCCcEEEeCCCHH-HHHHHHHHHHHhCCEEEEeCCchhH-------HHHHh-----ccHHHHhHhhhc-
Confidence 345555567899999999987543 2345678899999999987655422 22222 899998877521
Q ss_pred hHhHhhhCCCCccEEEeecCHHHHHHHHH
Q 006484 471 EIPDLLKLDDVIDLVIPRGSNKLVSQIKE 499 (643)
Q Consensus 471 ~~~~~l~~~~~v~~i~fTGs~~~g~~i~~ 499 (643)
....+ ....++.|.|-|.....+.+.+
T Consensus 1242 -~~~~~-~~~~~~avl~~G~~~~l~~~~~ 1268 (1318)
T PRK11809 1242 -KDWQL-ADQPFDAVLFHGDSDQLRALCE 1268 (1318)
T ss_pred -ccccc-ccCCccEEEEeCCHHHHHHHHH
Confidence 11222 2346999999999886665543
No 232
>PRK13769 histidinol dehydrogenase; Provisional
Probab=81.11 E-value=81 Score=33.61 Aligned_cols=210 Identities=15% Similarity=0.049 Sum_probs=116.0
Q ss_pred HHHHHHHHHHHHhcccccccccccccccCCCeeEEEEeeeeeeEEEEcCC-CchhHHHHHHHHHHhCCEEEEeCCc---c
Q 006484 363 KISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPDALVQIASLAIRSGNGLLLKGGK---E 438 (643)
Q Consensus 363 ~i~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~PlGvv~~I~p~-~P~~~~~~~~~AlaaGN~vi~Kps~---~ 438 (643)
-++.+.++++.+.....+..... ..+|.....++.|+--|++..|. +|-..++.++||-.||+.=|+=.+| -
T Consensus 58 ai~~a~~~I~~fh~~q~~~~~~~----~~~Gv~~g~~~~Pi~rvG~YVPa~~pStvLM~~iPAkvAGV~~Iv~~TPp~~i 133 (368)
T PRK13769 58 AALEAAKSLEALYSRLKPPEAVD----FYGGVLRSVFWKPVRRAALYVPARYVSTLVMLAVPARAAGVEEIYVVTPPRGV 133 (368)
T ss_pred HHHHHHHHHHHHHHHhCCCCeEe----cCCCeEEEEEEeeeeeeEEEeccchHHHHHHhhccHhhcCCCeEEEeCCCCCC
Confidence 34555566666653222211111 13567777889999999999995 3545567789999999865554333 2
Q ss_pred hHHHHHHHHHHHHHhcccccCcCceEeec-CcchHhHhhhCCCCccEEEeecCHHH--HHHHHH-hcCCCEEEecCccce
Q 006484 439 AMRSNAILHKVITSAIPDTVGEKLIGLVT-SREEIPDLLKLDDVIDLVIPRGSNKL--VSQIKE-STKIPVLGHADGICH 514 (643)
Q Consensus 439 tp~t~~~~~~l~~~a~~~alP~g~v~~v~-~~~~~~~~l~~~~~v~~i~fTGs~~~--g~~i~~-~a~~p~~lelGG~~p 514 (643)
.|.+ +..+++ .|+=.+.. |+...-..+..--+||+|+=-|..=+ +|+... ..++-.+ -|=..-
T Consensus 134 ~p~v-L~aa~~----------~Gv~eIy~vGGAQAIAa~a~gt~VDkIvGPGN~yV~~AK~~v~g~V~ID~~--AGPSEv 200 (368)
T PRK13769 134 TGEL-LAVAKE----------LGVKGVLAIGGPHGLAYAVFHMGVDMVAGPGGLYVQAAKYVLSQYVGIDGI--EGPTEL 200 (368)
T ss_pred CHHH-HHHHHH----------cCCCeeecccCHHHHHHHhcCCCcCEEECCCcHHHHHHHHHHhCCcCCCCc--CCCcce
Confidence 2322 111121 34445554 55432233333337999988887644 333211 1122222 222344
Q ss_pred EEEcCCCCHHHHHHHHHhhcCCCCCccccceeEEEcCccCCchhHHHHHHHHHHcCCEEecCccccccccCCCCcccccc
Q 006484 515 VYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLQIPETRLFHHE 594 (643)
Q Consensus 515 ~iV~~dAdl~~A~~~iv~~~~~n~g~C~a~~rv~V~~~i~~~~f~~~l~~~~~~~~~~~~g~~~~~~~~pv~~~~~~~eE 594 (643)
+|+-|+||.+..+.+++.=+=.... ..-++|..| .++.+++.+++++.-. +
T Consensus 201 lViAD~a~p~~vAaDLLaQAEH~~~----a~~iLvT~s---~~la~~V~~~v~~~~~---------------------~- 251 (368)
T PRK13769 201 VVYAEGVPPEVAVRGALAQLEHGPT----SFAYLLSTD---AELLKAAEEIYRRERT---------------------S- 251 (368)
T ss_pred EEEcCCCCHHHHHHHHHHHhhcCCC----CcEEEEECC---HHHHHHHHHHHHHHHH---------------------h-
Confidence 6666679999888877654322211 112444443 3566666666654300 0
Q ss_pred ccCceEEEEEeCCHHHHHHHHHccC
Q 006484 595 YNSMVCTVEIVDDVRAAIDHIHQHG 619 (643)
Q Consensus 595 ~FgPvl~v~~~~~~deAi~~aN~~~ 619 (643)
..|- ..|+-++|+|||++++|..-
T Consensus 252 ~~~~-~~iivv~~leeai~~~N~~A 275 (368)
T PRK13769 252 SMGP-LEVRKVAGVEEAVRFIDEIA 275 (368)
T ss_pred cCCC-CeEEEECCHHHHHHHHHhhC
Confidence 1221 24677899999999999854
No 233
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=74.08 E-value=4.8 Score=37.17 Aligned_cols=57 Identities=25% Similarity=0.274 Sum_probs=34.5
Q ss_pred EEeccCCccccCCCCCCCccceeeeecccchhHHhcCCCCCccCCCchHHHHHHHHHHHcCCcEEEEeCCCcchHH
Q 006484 193 VLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSII 268 (643)
Q Consensus 193 i~lTdVdGVy~~~P~~p~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gv~v~I~~g~~~~~l~ 268 (643)
++++||||++|+ +++.=.-.-+|.. .+ .+..|+. .....+.|+++-|+.|++...+.
T Consensus 10 Lli~DVDGvLTD------G~ly~~~~Gee~K---aF-----nv~DG~G-----ik~l~~~Gi~vAIITGr~s~ive 66 (170)
T COG1778 10 LLILDVDGVLTD------GKLYYDENGEEIK---AF-----NVRDGHG-----IKLLLKSGIKVAIITGRDSPIVE 66 (170)
T ss_pred EEEEeccceeec------CeEEEcCCCceee---ee-----eccCcHH-----HHHHHHcCCeEEEEeCCCCHHHH
Confidence 456899999998 4333221222332 12 2234443 34567899999999999876653
No 234
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=64.93 E-value=36 Score=32.17 Aligned_cols=59 Identities=15% Similarity=0.213 Sum_probs=35.5
Q ss_pred EEeccCCccccCCC-C-CCCccceeeeecccchhHHhcCCCCCccCCCchHHHHHHHHHHHcCCcEEEEeCCCcchHHHH
Q 006484 193 VLLSDVEGLYSGPP-S-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKV 270 (643)
Q Consensus 193 i~lTdVdGVy~~~P-~-~p~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gv~v~I~~g~~~~~l~~~ 270 (643)
.+.+|+|||+++.- - ++++...+..+. ..| .+.....+.|+++.|++++....+...
T Consensus 9 ~~v~d~dGv~tdg~~~~~~~g~~~~~~~~----------------~D~-----~~~~~L~~~Gi~laIiT~k~~~~~~~~ 67 (169)
T TIGR02726 9 LVILDVDGVMTDGRIVINDEGIESRNFDI----------------KDG-----MGVIVLQLCGIDVAIITSKKSGAVRHR 67 (169)
T ss_pred EEEEeCceeeECCeEEEcCCCcEEEEEec----------------chH-----HHHHHHHHCCCEEEEEECCCcHHHHHH
Confidence 46789999999842 1 334433333322 222 244566678999888887766655554
Q ss_pred Hc
Q 006484 271 LE 272 (643)
Q Consensus 271 ~~ 272 (643)
+.
T Consensus 68 l~ 69 (169)
T TIGR02726 68 AE 69 (169)
T ss_pred HH
Confidence 44
No 235
>PF03437 BtpA: BtpA family; InterPro: IPR005137 Photosystem I (PSI) is a large protein complex embedded within the photosynthetic thylakoid membrane. It consists of 11 subunits, ~100 chlorophyll a molecules, 2 phylloquinones, and 3 Fe4S4-clusters. The three dimensional structure of the PSI complex has been resolved at 2.5 A [], which allows the precise localisation of each cofactor. PSI together with photosystem II (PSII) catalyses the light-induced steps in oxygenic photosynthesis - a process found in cyanobacteria, eukaryotic algae (e.g. red algae, green algae) and higher plants. To date, three thylakoid proteins involved in the stable accumulation of PSI have been identified: BtpA [], Ycf3 [, ], and Ycf4 (IPR003359 from INTERPRO) []. Because translation of the psaA and psaB mRNAs encoding the two reaction centre polypeptides, of PSI and PSII respectively, is not affected in mutant strains lacking functional ycf3 and ycf4, the products of these two genes appear to act at a post-translational step of PSI biosynthesis. These gene products are therefore involved either in the stabilisation or in the assembly of the PSI complex. However, their exact roles remain unknown. The BtpA protein appears to act at the level of PSI stabilisation []. It is an extrinsic membrane protein located on the cytoplasmic side of the thylakoid membrane [, ]. Homologs of BtpA are found in the crenarchaeota and euryarchaeota, where their function remains unknown. The Ycf4 protein is firmly associated with the thylakoid membrane, presumably through a transmembrane domain []. Ycf4 co-fractionates with a protein complex larger than PSI upon sucrose density gradient centrifugation of solubilised thylakoids []. The Ycf3 protein is loosely associated with the thylakoid membrane and can be released from the membrane with sodium carbonate. This suggests that Ycf3 is not part of a stable complex and that it probably interacts transiently with its partners []. Ycf3 contains a number of tetratrico peptide repeats (TPR, IPR001440 from INTERPRO); TPR is a structural motif present in a wide range of proteins, which mediates protein-protein interactions.
Probab=54.43 E-value=29 Score=35.06 Aligned_cols=119 Identities=20% Similarity=0.207 Sum_probs=63.5
Q ss_pred ecchhHHHH-HHhhcCCCEEEEeccCCccccCCCCCCCccceeeeecccchh-HHh-cCCCCCccCCC---chHHHHHHH
Q 006484 174 WDNDSLAGL-LALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQA-EIT-FGDKSRVGRGG---MTAKVNAAY 247 (643)
Q Consensus 174 ~~~D~~A~~-lA~~L~Ad~li~lTdVdGVy~~~P~~p~a~~i~~i~~~e~~~-~~~-~g~~~~~~~gg---M~~Kl~aa~ 247 (643)
++++..... .=.+|+++ +-+++||.-=... .+..-+.+|..+ .+. .++..-.+||. ..+.++-..
T Consensus 123 ~~~~a~e~~r~R~~l~a~-v~ilaDV~~kh~~--------~l~~~~~~~~~~~a~~~~~aDaviVtG~~TG~~~~~~~l~ 193 (254)
T PF03437_consen 123 IEGCAGELLRYRKRLGAD-VKILADVHVKHSS--------PLATRDLEEAAKDAVERGGADAVIVTGKATGEPPDPEKLK 193 (254)
T ss_pred ccccHHHHHHHHHHcCCC-eEEEeeechhhcc--------cCCCCCHHHHHHHHHHhcCCCEEEECCcccCCCCCHHHHH
Confidence 445544333 33478999 9999998753322 222223333322 111 11111123332 233344333
Q ss_pred HHHH-cCCcEEEEeCCCcchHHHHH---cCCceeeEEecCccccc--cHHhHHHHHHHHH
Q 006484 248 CAAC-AGIPVVITSGFAMDSIIKVL---EGKRVGTLFHRDAHLWV--KQVGAREMAVAAR 301 (643)
Q Consensus 248 ~a~~-~gv~v~I~~g~~~~~l~~~~---~g~~~GT~i~~~~~~~~--~~~~v~~av~~A~ 301 (643)
.+.+ .++||.|-+|-+++++.+.+ +|-.+||++..+...+- ..+.+++.+++++
T Consensus 194 ~vr~~~~~PVlvGSGvt~~Ni~~~l~~ADG~IVGS~~K~~G~~~n~VD~~Rv~~fm~~v~ 253 (254)
T PF03437_consen 194 RVREAVPVPVLVGSGVTPENIAEYLSYADGAIVGSYFKKDGKWENPVDPERVRRFMEAVK 253 (254)
T ss_pred HHHhcCCCCEEEecCCCHHHHHHHHHhCCEEEEeeeeeeCCEeCCcCCHHHHHHHHHHhh
Confidence 3333 23889999999999996654 56678999987633211 3445665555543
No 236
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=50.30 E-value=30 Score=30.95 Aligned_cols=49 Identities=29% Similarity=0.544 Sum_probs=33.0
Q ss_pred cceEEEEeCCcccccCCCccC-HHHHHHHHHHHHHHHHCCCeEEEEeCChh
Q 006484 14 VKRLVVKVGTAVVTRSDGRLA-LGRLGALLEQLKELNSQGFEIILVSSGAV 63 (643)
Q Consensus 14 ~~~iVIKlGGs~l~~~~~~~~-~~~l~~~a~~I~~l~~~g~~vvlVhGGg~ 63 (643)
+|.+++=+.|+.+.+..+... ..-.....+.+..|++.|++++++. |.+
T Consensus 1 ~K~i~~DiDGTL~~~~~~~y~~~~~~~~~ie~L~~l~~~G~~IiiaT-GR~ 50 (126)
T TIGR01689 1 MKRLVMDLDNTITLTENGDYANVAPILAVIEKLRHYKALGFEIVISS-SRN 50 (126)
T ss_pred CCEEEEeCCCCcccCCCCcccccccCHHHHHHHHHHHHCCCEEEEEC-CCC
Confidence 368999999999875322111 1123567777888888999977776 444
No 237
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=48.07 E-value=53 Score=26.17 Aligned_cols=44 Identities=23% Similarity=0.300 Sum_probs=27.0
Q ss_pred eEEEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCCh-hHhhHH
Q 006484 16 RLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGA-VGVGRQ 68 (643)
Q Consensus 16 ~iVIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg-~~i~~~ 68 (643)
+.|+=.||.-.++. +.+-..+.++++.--.++|||||. ...+..
T Consensus 4 ~rVli~GgR~~~D~---------~~i~~~Ld~~~~~~~~~~lvhGga~~GaD~i 48 (71)
T PF10686_consen 4 MRVLITGGRDWTDH---------ELIWAALDKVHARHPDMVLVHGGAPKGADRI 48 (71)
T ss_pred CEEEEEECCccccH---------HHHHHHHHHHHHhCCCEEEEECCCCCCHHHH
Confidence 45666788887763 234444444444434678999998 555543
No 238
>cd01390 HMGB-UBF_HMG-box HMGB-UBF_HMG-box, class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal proteins, HMG1 and HMG2, which bind to bent or distorted DNA such as four-way DNA junctions, synthetic DNA cruciforms, kinked cisplatin-modified DNA, DNA bulges, cross-overs in supercoiled DNA, and can cause looping of linear DNA. Class III members include nucleolar and mitochondrial transcription factors, UBF and mtTF1, which bind four-way DNA junctions.
Probab=36.91 E-value=79 Score=24.00 Aligned_cols=35 Identities=11% Similarity=0.129 Sum_probs=26.6
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHH
Q 006484 298 VAARESSRRLQALQSQDRRKILLDVADALEANESL 332 (643)
Q Consensus 298 ~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 332 (643)
+.++.....|+.+|.++|..+........++...+
T Consensus 30 ~i~~~~~~~W~~ls~~eK~~y~~~a~~~~~~y~~e 64 (66)
T cd01390 30 EVTKILGEKWKELSEEEKKKYEEKAEKDKERYEKE 64 (66)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHh
Confidence 34566678899999999999988877766655444
No 239
>PF13376 OmdA: Bacteriocin-protection, YdeI or OmpD-Associated
Probab=36.09 E-value=52 Score=25.37 Aligned_cols=35 Identities=14% Similarity=0.115 Sum_probs=30.4
Q ss_pred HHhHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 006484 290 QVGAREMAVAARESSRRLQALQSQDRRKILLDVAD 324 (643)
Q Consensus 290 ~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~ 324 (643)
++++..+++.-..|...|..++...|..++..+..
T Consensus 7 P~dl~~aL~~~p~a~~~f~~l~~~~rr~~i~wi~~ 41 (63)
T PF13376_consen 7 PEDLEAALEANPEAKEFFESLTPSYRREYIRWINS 41 (63)
T ss_pred CHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHH
Confidence 46889999988999999999999999999876653
No 240
>PTZ00174 phosphomannomutase; Provisional
Probab=34.11 E-value=80 Score=31.62 Aligned_cols=44 Identities=20% Similarity=0.363 Sum_probs=34.3
Q ss_pred ccceEEEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCC
Q 006484 13 DVKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSG 61 (643)
Q Consensus 13 ~~~~iVIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGG 61 (643)
..|.++.=+-|+.+.+.. .++ ....+.|.+++++|+++++..|-
T Consensus 4 ~~klia~DlDGTLL~~~~-~is----~~~~~ai~~l~~~Gi~~viaTGR 47 (247)
T PTZ00174 4 KKTILLFDVDGTLTKPRN-PIT----QEMKDTLAKLKSKGFKIGVVGGS 47 (247)
T ss_pred CCeEEEEECcCCCcCCCC-CCC----HHHHHHHHHHHHCCCEEEEEcCC
Confidence 357899999999997643 455 34567788899999999988864
No 241
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=34.02 E-value=76 Score=32.15 Aligned_cols=43 Identities=9% Similarity=0.200 Sum_probs=33.6
Q ss_pred cceEEEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCC
Q 006484 14 VKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSG 61 (643)
Q Consensus 14 ~~~iVIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGG 61 (643)
.|.++.=+-|+.+.+. +.++ +...+.|.+|++.|+++++..|=
T Consensus 2 ~kli~~DlDGTLl~~~-~~i~----~~~~~ai~~l~~~G~~~~iaTGR 44 (272)
T PRK15126 2 ARLAAFDMDGTLLMPD-HHLG----EKTLSTLARLRERDITLTFATGR 44 (272)
T ss_pred ccEEEEeCCCcCcCCC-CcCC----HHHHHHHHHHHHCCCEEEEECCC
Confidence 5789999999999753 3455 45677888899999998888754
No 242
>PRK05265 pyridoxine 5'-phosphate synthase; Provisional
Probab=33.25 E-value=2.9e+02 Score=27.59 Aligned_cols=88 Identities=24% Similarity=0.238 Sum_probs=60.6
Q ss_pred HHHHHHHHHhCCCeeEecCCCceeccCCCCCCCCceeecchhHHHHHHhhcCCCEEEEeccCCccccCCCCCCCccceee
Q 006484 137 LYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHT 216 (643)
Q Consensus 137 ~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~~~~~~~~~D~~A~~lA~~L~Ad~li~lTdVdGVy~~~P~~p~a~~i~~ 216 (643)
..+.+..|-+.|+- |- -|+|.|.-....|..+|||.+-+.| |-|-+-. ..
T Consensus 115 l~~~i~~L~~~gIr-VS------------------LFidP~~~qi~~A~~~GAd~VELhT---G~yA~a~--------~~ 164 (239)
T PRK05265 115 LKPAIARLKDAGIR-VS------------------LFIDPDPEQIEAAAEVGADRIELHT---GPYADAK--------TE 164 (239)
T ss_pred HHHHHHHHHHCCCE-EE------------------EEeCCCHHHHHHHHHhCcCEEEEec---hhhhcCC--------Cc
Confidence 45677777777752 22 1488899999999999999999999 6664411 01
Q ss_pred eecccchhHHhcCCCCCccCCCchHHHHHHHHHHHcCCcEEEEeCCCcchHHHHH
Q 006484 217 YIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVL 271 (643)
Q Consensus 217 i~~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gv~v~I~~g~~~~~l~~~~ 271 (643)
-...|+.. -..++..|.+.|+.|+-..|-+.+++..+.
T Consensus 165 ~~~~el~~-----------------~~~aa~~a~~lGL~VnAGHgLny~Nv~~i~ 202 (239)
T PRK05265 165 AEAAELER-----------------IAKAAKLAASLGLGVNAGHGLNYHNVKPIA 202 (239)
T ss_pred chHHHHHH-----------------HHHHHHHHHHcCCEEecCCCCCHHhHHHHh
Confidence 11222221 134677888999999999988888876543
No 243
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=32.94 E-value=76 Score=31.99 Aligned_cols=45 Identities=9% Similarity=0.304 Sum_probs=34.3
Q ss_pred ccceEEEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCCh
Q 006484 13 DVKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGA 62 (643)
Q Consensus 13 ~~~~iVIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg 62 (643)
+.|.++.-+-|+.+.+. +.++ +...+.|.+++++|+++++..|=.
T Consensus 2 ~~kli~~DlDGTLl~~~-~~i~----~~~~~ai~~l~~~G~~~~iaTGR~ 46 (270)
T PRK10513 2 AIKLIAIDMDGTLLLPD-HTIS----PAVKQAIAAARAKGVNVVLTTGRP 46 (270)
T ss_pred ceEEEEEecCCcCcCCC-CccC----HHHHHHHHHHHHCCCEEEEecCCC
Confidence 35789999999999753 3454 355677888999999988887543
No 244
>PF03740 PdxJ: Pyridoxal phosphate biosynthesis protein PdxJ; InterPro: IPR004569 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. In Escherichia coli, the pdx genes involved in vitamin B6 have been characterised [, , ]. This entry represents PdxJ, which catalyses the condensation of 1-amino-3-oxo-4-(phosphohydroxy)propan-2-one and 1-deoxy-D-xylulose-5-phosphate to form pyridoxine-5'-phosphate. The product of the PdxJ reaction is then oxidized by PdxH to pyridoxal 5'-phosphate.; GO: 0008615 pyridoxine biosynthetic process, 0005737 cytoplasm; PDB: 3F4N_B 3O6D_A 3O6C_A 1M5W_G 1IXQ_D 1IXP_B 1IXN_A 1HO4_C 1HO1_A 1IXO_D ....
Probab=32.13 E-value=5.3e+02 Score=25.83 Aligned_cols=102 Identities=21% Similarity=0.161 Sum_probs=62.1
Q ss_pred hHHHHHHHHHhCCCeeEecCCCceeccCCCCCCCCceeecchhHHHHHHhhcCCCEEEEeccCCccccCCCCCCCcccee
Q 006484 136 QLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIH 215 (643)
Q Consensus 136 ~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~~~~~~~~~D~~A~~lA~~L~Ad~li~lTdVdGVy~~~P~~p~a~~i~ 215 (643)
...+.+..|-+.|+- |- -|+|.|.-....|..+|||.+-+.| |-|-+-. .
T Consensus 112 ~l~~~i~~L~~~gIr-vS------------------LFiDP~~~qi~~A~~~Gad~VELhT---G~yA~a~------~-- 161 (239)
T PF03740_consen 112 RLKPVIKRLKDAGIR-VS------------------LFIDPDPEQIEAAKELGADRVELHT---GPYANAF------D-- 161 (239)
T ss_dssp HHHHHHHHHHHTT-E-EE------------------EEE-S-HHHHHHHHHTT-SEEEEET---HHHHHHS------S--
T ss_pred HHHHHHHHHHhCCCE-EE------------------EEeCCCHHHHHHHHHcCCCEEEEeh---hHhhhhc------C--
Confidence 446778888887753 22 1488899999999999999999999 6664311 0
Q ss_pred eeecccchh-HHhcCCCCCccCCCchHHHHHHHHHHHcCCcEEEEeCCCcchHHHHHcCCceeeEEec
Q 006484 216 TYIRAKHQA-EITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHR 282 (643)
Q Consensus 216 ~i~~~e~~~-~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gv~v~I~~g~~~~~l~~~~~g~~~GT~i~~ 282 (643)
..++..+ ++. .-..++..|.+.|+.|+-..|-+.+++..+..-..+..+-..
T Consensus 162 --~~~~~~~ell~-------------~l~~aa~~a~~lGL~VnAGHgL~y~N~~~i~~i~~i~EvnIG 214 (239)
T PF03740_consen 162 --DAEEAEEELLE-------------RLRDAARYAHELGLGVNAGHGLNYDNVRPIAAIPPIEEVNIG 214 (239)
T ss_dssp --HHHHHHHHHHH-------------HHHHHHHHHHHTT-EEEEETT--TTTHHHHHTSTTEEEEEE-
T ss_pred --CHHHHHHHHHH-------------HHHHHHHHHHHcCCEEecCCCCCHHHHHHHHhCCCceEEecC
Confidence 1111111 111 113567788999999999999999988777665445554333
No 245
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=31.42 E-value=89 Score=30.53 Aligned_cols=44 Identities=16% Similarity=0.422 Sum_probs=33.4
Q ss_pred cceEEEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCCh
Q 006484 14 VKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGA 62 (643)
Q Consensus 14 ~~~iVIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg 62 (643)
.|.++.=+.|+.+.+.. .++ +...+.|.+|++.|++++++.|=.
T Consensus 3 ~kli~~DlDGTLl~~~~-~i~----~~~~~al~~l~~~G~~~~iaTGR~ 46 (230)
T PRK01158 3 IKAIAIDIDGTITDKDR-RLS----LKAVEAIRKAEKLGIPVILATGNV 46 (230)
T ss_pred eeEEEEecCCCcCCCCC-ccC----HHHHHHHHHHHHCCCEEEEEcCCc
Confidence 47888899999997532 343 456677888999999998887543
No 246
>PF00505 HMG_box: HMG (high mobility group) box; InterPro: IPR000910 High mobility group (HMG or HMGB) proteins are a family of relatively low molecular weight non-histone components in chromatin. HMG1 (also called HMG-T in fish) and HMG2 are two highly related proteins that bind single-stranded DNA preferentially and unwind double-stranded DNA. Although they have no sequence specificity, they have a high affinity for bent or distorted DNA, and bend linear DNA. HMG1 and HMG2 contain two DNA-binding HMG-box domains (A and B) that show structural and functional differences, and have a long acidic C-terminal domain rich in aspartic and glutamic acid residues. The acidic tail modulates the affinity of the tandem HMG boxes in HMG1 and 2 for a variety of DNA targets. HMG1 and 2 appear to play important architectural roles in the assembly of nucleoprotein complexes in a variety of biological processes, for example V(D)J recombination, the initiation of transcription, and DNA repair []. The profile in this entry describing the HMG-domains is much more general than the signature. In addition to the HMG1 and HMG2 proteins, HMG-domains occur in single or multiple copies in the following protein classes; the SOX family of transcription factors; SRY sex determining region Y protein and related proteins []; LEF1 lymphoid enhancer binding factor 1 []; SSRP recombination signal recognition protein; MTF1 mitochondrial transcription factor 1; UBF1/2 nucleolar transcription factors; Abf2 yeast ARS-binding factor []; and Saccharomyces cerevisiae transcription factors Ixr1, Rox1, Nhp6a, Nhp6b and Spp41.; GO: 0003677 DNA binding; PDB: 1I11_A 1J3C_A 1J3D_A 1WZ6_A 1WGF_A 2D7L_A 1GT0_D 3U2B_C 2CRJ_A 2CS1_A ....
Probab=31.35 E-value=99 Score=23.73 Aligned_cols=35 Identities=9% Similarity=0.123 Sum_probs=26.8
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHH
Q 006484 299 AARESSRRLQALQSQDRRKILLDVADALEANESLI 333 (643)
Q Consensus 299 ~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i 333 (643)
..+.+-..|+.+|.++|..+-.......+++..++
T Consensus 31 i~~~~~~~W~~l~~~eK~~y~~~a~~~~~~y~~~~ 65 (69)
T PF00505_consen 31 ISKILAQMWKNLSEEEKAPYKEEAEEEKERYEKEM 65 (69)
T ss_dssp HHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhhHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566679999999999999888877766655443
No 247
>PRK10976 putative hydrolase; Provisional
Probab=31.32 E-value=88 Score=31.49 Aligned_cols=45 Identities=13% Similarity=0.222 Sum_probs=34.5
Q ss_pred cceEEEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCChh
Q 006484 14 VKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAV 63 (643)
Q Consensus 14 ~~~iVIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~ 63 (643)
.|.++.=+-|+.+.+. +.++ +...+.|.++++.|++++|..|=..
T Consensus 2 ikli~~DlDGTLl~~~-~~is----~~~~~ai~~l~~~G~~~~iaTGR~~ 46 (266)
T PRK10976 2 YQVVASDLDGTLLSPD-HTLS----PYAKETLKLLTARGIHFVFATGRHH 46 (266)
T ss_pred ceEEEEeCCCCCcCCC-CcCC----HHHHHHHHHHHHCCCEEEEEcCCCh
Confidence 4788999999999754 3454 4567778899999999999885433
No 248
>PF09011 HMG_box_2: HMG-box domain; InterPro: IPR015101 This domain is predominantly found in Maelstrom homologue proteins. It has no known function. ; GO: 0005634 nucleus; PDB: 2EQZ_A 1V64_A 2CTO_A 1H5P_A 3TQ6_A 3FGH_A 3TMM_A 1J3X_A 2YRQ_A 1AAB_A ....
Probab=31.17 E-value=1.2e+02 Score=23.98 Aligned_cols=32 Identities=16% Similarity=0.184 Sum_probs=23.1
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhC
Q 006484 298 VAARESSRRLQALQSQDRRKILLDVADALEAN 329 (643)
Q Consensus 298 ~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~ 329 (643)
+..+.+-..|+.+|.++|..+-.+....=++.
T Consensus 34 e~~k~~~~~Wk~Ls~~EK~~Y~~~A~~~k~~y 65 (73)
T PF09011_consen 34 EVMKEISERWKSLSEEEKEPYEERAKEDKERY 65 (73)
T ss_dssp HHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 45567778999999999999887766544433
No 249
>COG1623 Predicted nucleic-acid-binding protein (contains the HHH domain) [General function prediction only]
Probab=31.09 E-value=6.1e+02 Score=26.18 Aligned_cols=62 Identities=21% Similarity=0.213 Sum_probs=39.9
Q ss_pred HHHHHHHhC--CCeeEecCCCceeccCCCCCCCCceeecchhHHHHHHhhcCCCEEEEec-cCCccccCC
Q 006484 139 DTVQSLLDL--RVIPIFNENDAVSTRKAPYEDSSGIFWDNDSLAGLLALELKADLLVLLS-DVEGLYSGP 205 (643)
Q Consensus 139 ~~i~~ll~~--g~iPVv~g~d~v~~~~~~~~~~~~~~~~~D~~A~~lA~~L~Ad~li~lT-dVdGVy~~~ 205 (643)
+-+...+.. |.+.|+.-|+-|..+. +|+-.+|.|+.|+.+=+..+-|--|+|+ |-.-|+-.|
T Consensus 26 ~Gld~Ilra~tGaLIvlG~de~v~~i~-----DGGF~ld~~fsa~~lyEL~KMDGAIILs~D~~kI~yAN 90 (349)
T COG1623 26 DGLDNILRANTGALIVLGDDENVEKIC-----DGGFSLDVDFSATRLYELAKMDGAIILSDDGSKILYAN 90 (349)
T ss_pred HHHHHHHhccCCeEEEEecchhhHhhh-----cCcEEEeccCCHHHHHHHHhcCCcEEEcCccceeeeee
Confidence 344455544 5666776555555432 3443499999999988888887666665 556666554
No 250
>PF06945 DUF1289: Protein of unknown function (DUF1289); InterPro: IPR010710 This family consists of a number of hypothetical bacterial proteins. The aligned region spans around 56 residues and contains 4 highly conserved cysteine residues towards the N terminus. The function of this family is unknown.
Probab=31.01 E-value=58 Score=24.06 Aligned_cols=22 Identities=23% Similarity=0.410 Sum_probs=18.8
Q ss_pred HHHhcCCHHHHHHHHHHHHHHH
Q 006484 305 RRLQALQSQDRRKILLDVADAL 326 (643)
Q Consensus 305 ~~w~~~~~~~R~~~L~~~a~~l 326 (643)
..|..++..+|.+++.++...+
T Consensus 28 ~~W~~~s~~er~~i~~~l~~R~ 49 (51)
T PF06945_consen 28 RDWKSMSDDERRAILARLRARR 49 (51)
T ss_pred HHHhhCCHHHHHHHHHHHHHHh
Confidence 4699999999999999887654
No 251
>COG0434 SgcQ Predicted TIM-barrel enzyme [General function prediction only]
Probab=29.72 E-value=1.2e+02 Score=30.25 Aligned_cols=62 Identities=24% Similarity=0.357 Sum_probs=39.9
Q ss_pred HHHHHHHHHHH-cCCcEEEEeCCCcchHHHH---HcCCceeeEEecCccccc--cHHhHHHHHHHHHH
Q 006484 241 AKVNAAYCAAC-AGIPVVITSGFAMDSIIKV---LEGKRVGTLFHRDAHLWV--KQVGAREMAVAARE 302 (643)
Q Consensus 241 ~Kl~aa~~a~~-~gv~v~I~~g~~~~~l~~~---~~g~~~GT~i~~~~~~~~--~~~~v~~av~~A~~ 302 (643)
+.++....+.+ ..+||.+-||-+++++.++ .+|-.+||.+......|- ..+.+.+.++.++.
T Consensus 192 ~d~~el~~a~~~~~~pvlvGSGv~~eN~~~~l~~adG~IvgT~lK~~G~~~n~VD~~Rv~~~v~~a~~ 259 (263)
T COG0434 192 PDLEELKLAKEAVDTPVLVGSGVNPENIEELLKIADGVIVGTSLKKGGVTWNPVDLERVRRFVEAARR 259 (263)
T ss_pred CCHHHHHHHHhccCCCEEEecCCCHHHHHHHHHHcCceEEEEEEccCCEecCccCHHHHHHHHHHHHH
Confidence 44455544444 2488999999999887554 457778999998765553 23345555554443
No 252
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=29.19 E-value=1e+02 Score=30.96 Aligned_cols=43 Identities=16% Similarity=0.368 Sum_probs=33.2
Q ss_pred cceEEEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCC
Q 006484 14 VKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSG 61 (643)
Q Consensus 14 ~~~iVIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGG 61 (643)
.|.++.=+-|+.+.+.. .++ ....+.|.+++++|++++|..|=
T Consensus 3 ~kli~~DlDGTLl~~~~-~i~----~~~~~ai~~~~~~G~~~~iaTGR 45 (272)
T PRK10530 3 YRVIALDLDGTLLTPKK-TIL----PESLEALARAREAGYKVIIVTGR 45 (272)
T ss_pred ccEEEEeCCCceECCCC-ccC----HHHHHHHHHHHHCCCEEEEEcCC
Confidence 57899999999997543 444 34567888999999998888743
No 253
>smart00398 HMG high mobility group.
Probab=28.58 E-value=1.5e+02 Score=22.58 Aligned_cols=35 Identities=11% Similarity=0.141 Sum_probs=26.3
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHH
Q 006484 299 AARESSRRLQALQSQDRRKILLDVADALEANESLI 333 (643)
Q Consensus 299 ~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~i 333 (643)
.++.....|+.+|.++|..+........+++..++
T Consensus 32 i~~~~~~~W~~l~~~ek~~y~~~a~~~~~~y~~~~ 66 (70)
T smart00398 32 ISKKLGERWKLLSEEEKAPYEEKAKKDKERYEEEM 66 (70)
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556678999999999999888777666655443
No 254
>cd01388 SOX-TCF_HMG-box SOX-TCF_HMG-box, class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and vertebrates, and transcription factor-like proteins, TCF-1, -3, -4, and LEF-1. They appear to bind the minor groove of the A/T C A A A G/C-motif.
Probab=26.53 E-value=1.5e+02 Score=23.32 Aligned_cols=34 Identities=12% Similarity=0.171 Sum_probs=25.3
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHH
Q 006484 298 VAARESSRRLQALQSQDRRKILLDVADALEANES 331 (643)
Q Consensus 298 ~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 331 (643)
+.++..-..|+.+|.++|..+........+++..
T Consensus 31 eisk~l~~~Wk~ls~~eK~~y~~~a~~~k~~y~~ 64 (72)
T cd01388 31 AISKILGDRWKALSNEEKQPYYEEAKKLKELHMK 64 (72)
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHH
Confidence 3456677899999999999887776666655543
No 255
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=25.88 E-value=1.7e+02 Score=30.25 Aligned_cols=49 Identities=20% Similarity=0.341 Sum_probs=37.9
Q ss_pred ccceEEEEeCCcccccCCC-ccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhH
Q 006484 13 DVKRLVVKVGTAVVTRSDG-RLALGRLGALLEQLKELNSQGFEIILVSSGAVG 64 (643)
Q Consensus 13 ~~~~iVIKlGGs~l~~~~~-~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~ 64 (643)
.++.+|.=+.|+.++++.. ++.. +.+.+.+.+|++.|++++|+.||+..
T Consensus 125 ~~kvIvFDLDgTLi~~~~~v~ird---PgV~EaL~~LkekGikLaIaTS~~Re 174 (301)
T TIGR01684 125 PPHVVVFDLDSTLITDEEPVRIRD---PRIYDSLTELKKRGCILVLWSYGDRD 174 (301)
T ss_pred cceEEEEecCCCCcCCCCccccCC---HHHHHHHHHHHHCCCEEEEEECCCHH
Confidence 4578999999999998642 1221 56778888899999999999987554
No 256
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=25.70 E-value=1.8e+02 Score=30.10 Aligned_cols=48 Identities=21% Similarity=0.323 Sum_probs=36.4
Q ss_pred ccceEEEEeCCcccccCCC-ccCHHHHHHHHHHHHHHHHCCCeEEEEeCChh
Q 006484 13 DVKRLVVKVGTAVVTRSDG-RLALGRLGALLEQLKELNSQGFEIILVSSGAV 63 (643)
Q Consensus 13 ~~~~iVIKlGGs~l~~~~~-~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~ 63 (643)
-.+.+|.-+.|+.+++... ++. -..+.+.|.+|+++|+++.|+.+|..
T Consensus 127 ~~~~i~~D~D~TL~~~~~~v~ir---dp~V~EtL~eLkekGikLaIvTNg~R 175 (303)
T PHA03398 127 IPHVIVFDLDSTLITDEEPVRIR---DPFVYDSLDELKERGCVLVLWSYGNR 175 (303)
T ss_pred eccEEEEecCCCccCCCCccccC---ChhHHHHHHHHHHCCCEEEEEcCCCh
Confidence 3578999999999998542 122 14677788889999999999997733
No 257
>PLN02645 phosphoglycolate phosphatase
Probab=25.13 E-value=1.1e+02 Score=31.75 Aligned_cols=52 Identities=13% Similarity=0.314 Sum_probs=41.3
Q ss_pred hhHhhhcccceEEEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCChh
Q 006484 6 SSRAFVKDVKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAV 63 (643)
Q Consensus 6 ~~~~~~~~~~~iVIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~ 63 (643)
+.++.+..++.+++=+-|.++.... .+....+.|..|++.|++++++.+.+.
T Consensus 20 ~~~~~~~~~~~~~~D~DGtl~~~~~------~~~ga~e~l~~lr~~g~~~~~~TN~~~ 71 (311)
T PLN02645 20 NADELIDSVETFIFDCDGVIWKGDK------LIEGVPETLDMLRSMGKKLVFVTNNST 71 (311)
T ss_pred HHHHHHHhCCEEEEeCcCCeEeCCc------cCcCHHHHHHHHHHCCCEEEEEeCCCC
Confidence 3466677789999999999997542 145678889999999999999998764
No 258
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=24.72 E-value=4.5e+02 Score=27.60 Aligned_cols=95 Identities=31% Similarity=0.320 Sum_probs=63.0
Q ss_pred HHHHHHHHhCCCeeEecCCCceeccCCCCCCCCcee-ecchhHHHHHHhhcCCC--------EEEEeccCCccccCCCCC
Q 006484 138 YDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIF-WDNDSLAGLLALELKAD--------LLVLLSDVEGLYSGPPSE 208 (643)
Q Consensus 138 ~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~~~~~~-~~~D~~A~~lA~~L~Ad--------~li~lTdVdGVy~~~P~~ 208 (643)
.+.-+.|+++|.++|-.+ +|.. + +....+ --.-.+|..+|.+++|. +=++++.|+||...
T Consensus 101 ~~lt~~l~~~gvtaIayE--TV~~---~--~g~lPlLaPMSeVAGrla~q~Ga~~lek~~GG~GvllgGvpGV~~~---- 169 (371)
T COG0686 101 PELTEALLKSGVTAIAYE--TVQL---P--DGNLPLLAPMSEVAGRLAAQAGAYYLEKTNGGKGVLLGGVPGVLPA---- 169 (371)
T ss_pred hHHHHHHHHcCcceEEEE--EEEc---C--CCCCcccchHHHHhhhHHHHHHHHHHHhccCCceeEecCCCCCCCc----
Confidence 466788999999999874 2322 1 112333 45568889999998886 45788999997543
Q ss_pred CCccceeeeecccchhHHhcCCCCCccCCCchHHHHHHHHHHHcCCcEEEEeCCCcchH
Q 006484 209 PNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSI 267 (643)
Q Consensus 209 p~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gv~v~I~~g~~~~~l 267 (643)
+.. .+ -||... -++++.|.-.|-.|.|++-. .++|
T Consensus 170 ---kv~----------ii---------GGGvvg-tnaAkiA~glgA~Vtild~n-~~rl 204 (371)
T COG0686 170 ---KVV----------VL---------GGGVVG-TNAAKIAIGLGADVTILDLN-IDRL 204 (371)
T ss_pred ---cEE----------EE---------CCcccc-chHHHHHhccCCeeEEEecC-HHHH
Confidence 111 11 233333 47899999999999998743 4555
No 259
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=23.82 E-value=2.1e+02 Score=26.23 Aligned_cols=59 Identities=22% Similarity=0.307 Sum_probs=34.0
Q ss_pred EEeccCCccccCCC-C-CCCccceeeeecccchhHHhcCCCCCccCCCchHHHHHHHHHHHcCCcEEEEeCCCcchHHHH
Q 006484 193 VLLSDVEGLYSGPP-S-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKV 270 (643)
Q Consensus 193 i~lTdVdGVy~~~P-~-~p~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gv~v~I~~g~~~~~l~~~ 270 (643)
++++|.||.+.+.+ . .++++.+..+...+. .++....++|+++.|++++........
T Consensus 3 ~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~~~---------------------~~i~~Lk~~G~~i~IvTn~~~~~~~~~ 61 (154)
T TIGR01670 3 LLILDVDGVLTDGKIYYTNNGEEIKAFNVRDG---------------------YGIRCALKSGIEVAIITGRKAKLVEDR 61 (154)
T ss_pred EEEEeCceeEEcCeEEECCCCcEEEEEechhH---------------------HHHHHHHHCCCEEEEEECCCCHHHHHH
Confidence 46789999987643 1 333444444321110 134445668999888888766555444
Q ss_pred Hc
Q 006484 271 LE 272 (643)
Q Consensus 271 ~~ 272 (643)
+.
T Consensus 62 l~ 63 (154)
T TIGR01670 62 CK 63 (154)
T ss_pred HH
Confidence 43
No 260
>PF11305 DUF3107: Protein of unknown function (DUF3107); InterPro: IPR021456 Some members in this family of proteins are annotated as ATP-binding proteins however this cannot be confirmed. Currently no function is known.
Probab=23.79 E-value=76 Score=25.55 Aligned_cols=27 Identities=19% Similarity=0.240 Sum_probs=24.9
Q ss_pred ecchhHHHHHHhhcCCC-EEEEeccCCc
Q 006484 174 WDNDSLAGLLALELKAD-LLVLLSDVEG 200 (643)
Q Consensus 174 ~~~D~~A~~lA~~L~Ad-~li~lTdVdG 200 (643)
.+.|.+...+..+|..+ .++-|||..|
T Consensus 20 ~s~dev~~~v~~Al~~~~~~l~LtD~kG 47 (74)
T PF11305_consen 20 QSADEVEAAVTDALADGSGVLTLTDEKG 47 (74)
T ss_pred CCHHHHHHHHHHHHhCCCceEEEEeCCC
Confidence 77899999999999998 8999999988
No 261
>PLN02887 hydrolase family protein
Probab=23.25 E-value=1.5e+02 Score=33.92 Aligned_cols=49 Identities=12% Similarity=0.295 Sum_probs=37.1
Q ss_pred HhhhcccceEEEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCC
Q 006484 8 RAFVKDVKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSG 61 (643)
Q Consensus 8 ~~~~~~~~~iVIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGG 61 (643)
|....+.|.|+.=+-|+.+.+. +.++ ....+.|.+++++|++++|..|=
T Consensus 302 ~~~~~~iKLIa~DLDGTLLn~d-~~Is----~~t~eAI~kl~ekGi~~vIATGR 350 (580)
T PLN02887 302 RFYKPKFSYIFCDMDGTLLNSK-SQIS----ETNAKALKEALSRGVKVVIATGK 350 (580)
T ss_pred hhhccCccEEEEeCCCCCCCCC-CccC----HHHHHHHHHHHHCCCeEEEEcCC
Confidence 3344467889999999999753 3454 45578899999999998888854
No 262
>PRK09875 putative hydrolase; Provisional
Probab=22.89 E-value=7.4e+02 Score=25.61 Aligned_cols=71 Identities=18% Similarity=0.334 Sum_probs=42.2
Q ss_pred HhccCCCCcceeEecccccCcchhhchHHHHHHHHHhCCCeeEecCCCceeccCCCCCCCCceeecchhHHHHHHhh--c
Q 006484 110 LFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSLAGLLALE--L 187 (643)
Q Consensus 110 ~l~~~g~~~~~~~~t~~~~~~~~~~~~~~~~i~~ll~~g~iPVv~g~d~v~~~~~~~~~~~~~~~~~D~~A~~lA~~--L 187 (643)
.|.+.|+++.+++++.-|.. .+.+.+..+++.|...=+ |.+.. + .+...+..+..+... -
T Consensus 171 il~e~Gvd~~rvvi~H~d~~------~d~~~~~~l~~~G~~l~f---D~~g~--------~-~~~pd~~r~~~i~~L~~~ 232 (292)
T PRK09875 171 LLQAHGVDLSRVTVGHCDLK------DNLDNILKMIDLGAYVQF---DTIGK--------N-SYYPDEKRIAMLHALRDR 232 (292)
T ss_pred HHHHcCcCcceEEEeCCCCC------CCHHHHHHHHHcCCEEEe---ccCCC--------c-ccCCHHHHHHHHHHHHhc
Confidence 45567888888877644421 235788899999987665 32211 1 111112334444333 2
Q ss_pred C-CCEEEEeccC
Q 006484 188 K-ADLLVLLSDV 198 (643)
Q Consensus 188 ~-Ad~li~lTdV 198 (643)
| +|++++-+|.
T Consensus 233 Gy~drilLS~D~ 244 (292)
T PRK09875 233 GLLNRVMLSMDI 244 (292)
T ss_pred CCCCeEEEeCCC
Confidence 6 8999999998
No 263
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=22.71 E-value=1.5e+02 Score=29.83 Aligned_cols=46 Identities=15% Similarity=0.330 Sum_probs=35.6
Q ss_pred ccceEEEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCChh
Q 006484 13 DVKRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAV 63 (643)
Q Consensus 13 ~~~~iVIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~ 63 (643)
+.|.+++=+.|+.+.+.. .+. ....+.|+++++.|++++|+.|-..
T Consensus 2 ~~kli~~DlDGTLl~~~~-~i~----~~~~~al~~~~~~g~~v~iaTGR~~ 47 (264)
T COG0561 2 MIKLLAFDLDGTLLDSNK-TIS----PETKEALARLREKGVKVVLATGRPL 47 (264)
T ss_pred CeeEEEEcCCCCccCCCC-ccC----HHHHHHHHHHHHCCCEEEEECCCCh
Confidence 457899999999998754 233 5667777789999999999986544
No 264
>cd00084 HMG-box High Mobility Group (HMG)-box is found in a variety of eukaryotic chromosomal proteins and transcription factors. HMGs bind to the minor groove of DNA and have been classified by DNA binding preferences. Two phylogenically distinct groups of Class I proteins bind DNA in a sequence specific fashion and contain a single HMG box. One group (SOX-TCF) includes transcription factors, TCF-1, -3, -4; and also SRY and LEF-1, which bind four-way DNA junctions and duplex DNA targets. The second group (MATA) includes fungal mating type gene products MC, MATA1 and Ste11. Class II and III proteins (HMGB-UBF) bind DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal proteins, HMG1 and HMG2, which bind to bent or distorted DNA such as four-way DNA junctions, synthetic DNA cruciforms, kinked cisplatin-modified DNA, DNA bulges, cross-overs in supercoiled DNA, and can cause looping of linear DNA. Class III member
Probab=22.16 E-value=2.3e+02 Score=21.12 Aligned_cols=33 Identities=12% Similarity=0.126 Sum_probs=24.6
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCH
Q 006484 298 VAARESSRRLQALQSQDRRKILLDVADALEANE 330 (643)
Q Consensus 298 ~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~ 330 (643)
+..+.....|+.+|.++|..+.........++.
T Consensus 30 ~i~~~~~~~W~~l~~~~k~~y~~~a~~~~~~y~ 62 (66)
T cd00084 30 EISKILGEMWKSLSEEEKKKYEEKAEKDKERYE 62 (66)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 345566788999999999988877766655543
No 265
>COG1979 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family [Energy production and conversion]
Probab=21.37 E-value=2.1e+02 Score=30.14 Aligned_cols=61 Identities=13% Similarity=0.297 Sum_probs=43.4
Q ss_pred hhHhhhcccceEEEEeCCcccccCC------------------C-ccCHHHHHHHHHHHHHHHHCCCeEEEEeCChhHhh
Q 006484 6 SSRAFVKDVKRLVVKVGTAVVTRSD------------------G-RLALGRLGALLEQLKELNSQGFEIILVSSGAVGVG 66 (643)
Q Consensus 6 ~~~~~~~~~~~iVIKlGGs~l~~~~------------------~-~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~~i~ 66 (643)
..++.+++.+++.|-+||-++.... | .++ .++..+.+-|.-.+++++.++|-.|||.-++
T Consensus 21 ~l~~ei~~~~kVLi~YGGGSIKrnGvydqV~~~Lkg~~~~E~~GVEPN-P~~~Tv~kaV~i~kee~idflLAVGGGSViD 99 (384)
T COG1979 21 ELREEIPKDAKVLIVYGGGSIKKNGVYDQVVEALKGIEVIEFGGVEPN-PRLETLMKAVEICKEENIDFLLAVGGGSVID 99 (384)
T ss_pred HHHhhccccCeEEEEecCccccccchHHHHHHHhcCceEEEecCCCCC-chHHHHHHHHHHHHHcCceEEEEecCcchhh
Confidence 3466788888999999998876321 0 112 2366777777778888999999888877665
Q ss_pred H
Q 006484 67 R 67 (643)
Q Consensus 67 ~ 67 (643)
-
T Consensus 100 ~ 100 (384)
T COG1979 100 G 100 (384)
T ss_pred h
Confidence 4
No 266
>PF03295 Pox_TAA1: Poxvirus trans-activator protein A1 C-terminal; InterPro: IPR004975 Late transcription factor VLTF-2, acts with RNA polymerase to initiate transcription from late gene promoters [].
Probab=21.01 E-value=1.1e+02 Score=23.37 Aligned_cols=30 Identities=13% Similarity=0.160 Sum_probs=24.4
Q ss_pred cccccccCceEEEEEeCCHHHHHHHHHccC
Q 006484 590 LFHHEYNSMVCTVEIVDDVRAAIDHIHQHG 619 (643)
Q Consensus 590 ~~~eE~FgPvl~v~~~~~~deAi~~aN~~~ 619 (643)
.++||-=--+||+.-|++-|+.++++|...
T Consensus 8 ALREEPKisLLPLv~Y~~Pe~Vi~iIN~lR 37 (63)
T PF03295_consen 8 ALREEPKISLLPLVFYEDPEEVINIINELR 37 (63)
T ss_pred eeccCCcceEEeeeeccCHHHHHHHHHHhh
Confidence 356775556889999999999999999843
No 267
>PLN02151 trehalose-phosphatase
Probab=20.73 E-value=2.2e+02 Score=30.36 Aligned_cols=69 Identities=16% Similarity=0.271 Sum_probs=43.3
Q ss_pred HHHHHHhhcCCCEEEEeccCCccccCCCCCCCccceeeeecccchhHHhcCCCCCccCCCchHHHHHHHHHHHcCCcEEE
Q 006484 179 LAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVI 258 (643)
Q Consensus 179 ~A~~lA~~L~Ad~li~lTdVdGVy~~~P~~p~a~~i~~i~~~e~~~~~~~g~~~~~~~ggM~~Kl~aa~~a~~~gv~v~I 258 (643)
....++...++++++++.|.||=+..--.+|+... |-+....++..+..+.+|.|
T Consensus 86 ~~~~~~~~~~~~~~ll~lDyDGTL~PIv~~P~~A~-------------------------~~~~~~~aL~~La~~~~vaI 140 (354)
T PLN02151 86 MFEEILHKSEGKQIVMFLDYDGTLSPIVDDPDRAF-------------------------MSKKMRNTVRKLAKCFPTAI 140 (354)
T ss_pred HHHHHHHhhcCCceEEEEecCccCCCCCCCccccc-------------------------CCHHHHHHHHHHhcCCCEEE
Confidence 33445555788899999999996652101233211 12334445554546678999
Q ss_pred EeCCCcchHHHHHc
Q 006484 259 TSGFAMDSIIKVLE 272 (643)
Q Consensus 259 ~~g~~~~~l~~~~~ 272 (643)
++|+....+...+.
T Consensus 141 vSGR~~~~l~~~~~ 154 (354)
T PLN02151 141 VSGRCREKVSSFVK 154 (354)
T ss_pred EECCCHHHHHHHcC
Confidence 99999888877653
No 268
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=20.25 E-value=2.1e+02 Score=27.66 Aligned_cols=44 Identities=14% Similarity=0.348 Sum_probs=32.9
Q ss_pred ceEEEEeCCcccccCCCccCHHHHHHHHHHHHHHHHCCCeEEEEeCChh
Q 006484 15 KRLVVKVGTAVVTRSDGRLALGRLGALLEQLKELNSQGFEIILVSSGAV 63 (643)
Q Consensus 15 ~~iVIKlGGs~l~~~~~~~~~~~l~~~a~~I~~l~~~g~~vvlVhGGg~ 63 (643)
|.++.=+-|+.+.+. +.++ +...+.|.+|++.|++++++.|-..
T Consensus 2 k~v~~DlDGTLl~~~-~~i~----~~~~~~i~~l~~~g~~~~~~TGR~~ 45 (215)
T TIGR01487 2 KLVAIDIDGTLTEPN-RMIS----ERAIEAIRKAEKKGIPVSLVTGNTV 45 (215)
T ss_pred cEEEEecCCCcCCCC-cccC----HHHHHHHHHHHHCCCEEEEEcCCcc
Confidence 578888999999643 2343 4567778889999999998886533
Done!