Query 006488
Match_columns 643
No_of_seqs 249 out of 708
Neff 5.2
Searched_HMMs 46136
Date Fri Mar 29 00:00:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006488.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/006488hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02703 beta-fructofuranosida 100.0 5E-145 1E-149 1174.1 43.5 609 3-643 2-618 (618)
2 PLN02973 beta-fructofuranosida 100.0 1E-122 3E-127 995.6 38.7 476 144-626 93-568 (571)
3 PF12899 Glyco_hydro_100: Alka 100.0 1E-122 3E-127 978.4 35.7 436 161-603 1-436 (436)
4 PLN03005 beta-fructofuranosida 100.0 9E-122 2E-126 987.6 39.3 464 150-618 76-539 (550)
5 PF06202 GDE_C: Amylo-alpha-1, 100.0 2.9E-58 6.3E-63 494.3 30.3 327 176-595 15-370 (370)
6 COG3408 GDB1 Glycogen debranch 100.0 1.4E-48 3.1E-53 442.9 31.2 351 157-606 249-615 (641)
7 TIGR01561 gde_arch glycogen de 100.0 4E-48 8.8E-53 434.3 23.8 268 189-541 286-574 (575)
8 TIGR01531 glyc_debranch glycog 100.0 1.8E-46 4E-51 442.4 26.1 343 189-598 1025-1462(1464)
9 PRK10137 alpha-glucosidase; Pr 100.0 3.3E-34 7.1E-39 328.9 34.0 369 152-598 303-781 (786)
10 KOG3625 Alpha amylase [Carbohy 99.9 1.7E-24 3.7E-29 243.9 19.4 341 193-600 1078-1516(1521)
11 TIGR01577 oligosac_amyl oligos 99.9 8.8E-21 1.9E-25 216.5 30.7 337 157-600 256-613 (616)
12 PRK13271 treA trehalase; Provi 99.9 2.2E-19 4.8E-24 202.0 29.2 311 192-602 155-538 (569)
13 PLN02567 alpha,alpha-trehalase 99.8 1.3E-18 2.9E-23 196.0 28.9 332 192-608 148-552 (554)
14 PRK13272 treA trehalase; Provi 99.8 2.1E-17 4.6E-22 184.9 28.2 310 192-603 156-539 (542)
15 PRK13270 treF trehalase; Provi 99.8 1.7E-16 3.6E-21 178.2 30.2 310 192-603 167-549 (549)
16 PF01204 Trehalase: Trehalase; 99.7 1.2E-16 2.7E-21 179.2 23.1 315 192-599 124-510 (512)
17 PF05592 Bac_rhamnosid: Bacter 99.6 9E-15 1.9E-19 163.0 20.1 295 192-608 142-455 (509)
18 PF04685 DUF608: Protein of un 99.6 2.7E-15 5.8E-20 162.0 6.6 253 279-590 95-363 (365)
19 COG3387 SGA1 Glucoamylase and 99.6 8.8E-13 1.9E-17 150.8 27.2 350 158-602 245-606 (612)
20 PF03200 Glyco_hydro_63: Manno 99.5 8.6E-13 1.9E-17 154.8 22.3 268 301-597 490-798 (801)
21 TIGR01535 glucan_glucosid gluc 99.4 3.8E-10 8.3E-15 129.9 30.6 356 154-601 248-633 (648)
22 COG3459 Cellobiose phosphoryla 99.2 4.3E-10 9.4E-15 130.6 21.0 282 200-557 615-922 (1056)
23 COG1626 TreA Neutral trehalase 98.9 1.9E-07 4.1E-12 104.1 24.7 312 192-602 167-554 (558)
24 KOG2161 Glucosidase I [Carbohy 98.9 1.8E-07 4E-12 106.6 22.2 279 288-594 507-841 (849)
25 KOG0602 Neutral trehalase [Car 98.7 1.4E-06 3.1E-11 98.7 21.3 325 192-613 181-579 (600)
26 PF00723 Glyco_hydro_15: Glyco 98.6 4.6E-06 9.9E-11 92.5 21.0 185 178-395 23-226 (448)
27 COG4354 Predicted bile acid be 98.3 5.6E-05 1.2E-09 85.0 20.0 220 282-565 441-682 (721)
28 PF06824 DUF1237: Protein of u 98.1 3.6E-05 7.7E-10 84.8 12.7 342 174-593 29-418 (424)
29 COG3538 Uncharacterized conser 97.4 0.011 2.4E-07 63.8 18.5 184 196-394 60-271 (434)
30 KOG2119 Predicted bile acid be 96.3 0.12 2.6E-06 60.3 16.1 235 296-591 570-823 (879)
31 PF03632 Glyco_hydro_65m: Glyc 87.0 2.5 5.4E-05 46.7 8.6 158 192-373 28-195 (370)
32 cd00249 AGE AGE domain; N-acyl 84.5 56 0.0012 35.1 17.4 97 285-398 55-152 (384)
33 COG1331 Highly conserved prote 76.3 81 0.0018 37.7 15.9 100 288-404 214-316 (667)
34 COG1331 Highly conserved prote 59.4 3.9E+02 0.0084 32.2 21.4 45 516-561 520-571 (667)
35 PRK13807 maltose phosphorylase 58.9 1.3E+02 0.0028 36.6 13.4 77 289-372 431-514 (756)
36 COG1554 ATH1 Trehalose and mal 44.4 3.7E+02 0.008 33.0 13.7 77 289-371 440-522 (772)
37 PF07221 GlcNAc_2-epim: N-acyl 38.2 3.2E+02 0.007 29.2 11.3 97 286-403 84-181 (346)
38 PF07721 TPR_4: Tetratricopept 29.5 86 0.0019 21.0 3.4 25 531-555 1-25 (26)
39 cd02892 SQCY_1 Squalene cyclas 28.9 9.9E+02 0.021 28.3 14.2 142 155-323 327-487 (634)
40 PF03663 Glyco_hydro_76: Glyco 23.7 4.4E+02 0.0095 29.0 9.4 110 279-402 152-262 (370)
41 PF11199 DUF2891: Protein of u 22.7 2E+02 0.0043 31.7 6.3 58 278-342 154-211 (326)
42 COG3459 Cellobiose phosphoryla 21.7 1.2E+02 0.0025 37.9 4.7 60 532-591 758-838 (1056)
43 PF06202 GDE_C: Amylo-alpha-1, 21.7 1.9E+02 0.0041 31.9 6.1 58 159-223 49-111 (370)
44 PF06051 DUF928: Domain of Unk 20.8 90 0.002 31.4 3.1 30 354-383 143-172 (189)
45 PF13428 TPR_14: Tetratricopep 20.3 2.2E+02 0.0048 21.1 4.5 31 531-561 1-31 (44)
No 1
>PLN02703 beta-fructofuranosidase
Probab=100.00 E-value=5e-145 Score=1174.07 Aligned_cols=609 Identities=75% Similarity=1.222 Sum_probs=573.0
Q ss_pred hhhHHHHHHhcCCCCCccccCcccccCCccccceeeeccccccccchhHHHh---hhhcccceeeecccCCCCCCC-cc-
Q 006488 3 AAGEAVLQVLSGASPHVNSFDRCLNISSSGVSFKFNVKYAKNKGTGYAELHN---GLKSRWRVCVFHGVDCDSHGK-TG- 77 (643)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~-~~- 77 (643)
||+|+|||+++|++++++|++++|+|+.+..+++ +++|++.++ ..++...+..||+.+.++|.+ ++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (618)
T PLN02703 2 AASETVLRVPLGSLSQSCYLASFFVNSTPNLSFK---------PVSYNRKKVRCTNSHEYSSVSACQDADGSFHSSNECL 72 (618)
T ss_pred chhhhHHhccccccCCcchhhhhhcCCccccccc---------cccccccccccccccceeccCcccccccccccchhhh
Confidence 6899999999999999999999999988877544 344444433 467788899999999999988 33
Q ss_pred -cCCCccccccccccccccCccccCCCCCccCCCCCCCCCCccchhhhhhhhcCCcccccCCCccccccccccccccccc
Q 006488 78 -CNRLKSGCCKCRRIESIDGLTVDNGRQPSFPNKSESNEPNVQDFKLDRQLKNGKAGISSNDKLNASGSITNTVHKVWAK 156 (643)
Q Consensus 78 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (643)
.+++..++||||+++..++. +.+.+|.++...+- .+.. -+.+++++++|| ..+++.+
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~--~~~~-----~~~~~~~~~~~~----------~~~~~~~ 130 (618)
T PLN02703 73 KGKKFVQMRCKCQKHDVEESI-----RSTLLPSDGLKSDL--DEMP-----LPVNGSFSSNGN----------AQSVGTK 130 (618)
T ss_pred hhhhHHHHhhhhhhhhhhccc-----cccccccccccccc--cccc-----CcccCcCCCCCc----------ccccCCC
Confidence 68999999999999977666 78888887765431 1111 277889999888 6688999
Q ss_pred hHHHHHHHHHHHhhccccCCcceeeeccCCCCccccCCCccccchhHHHHHHhhccCChHHHHHHHHHHHhhhhcccccc
Q 006488 157 SVEDEAWDLLRESIVYYCGNPVGTIAANDPNDSTILNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILHTLQLQSWEKTMD 236 (643)
Q Consensus 157 ~~~~~A~~~Lr~~~v~~~~~p~G~~Aa~d~~~a~~~~Y~~vfGRDt~Isalg~L~~G~peiaR~~L~~~l~LQ~~e~~ld 236 (643)
.+.++||++|++++|+||++|+||+||.|+++..+.||++||+||++|+++++|+.|++|++|+||..+++||++|+++|
T Consensus 131 ~~~~eA~elL~~s~v~~~g~pvGtvAA~d~~~~~~lNY~qVFiRDfVpsaLafLl~Ge~eIVrnFl~~tL~lq~~ektld 210 (618)
T PLN02703 131 SIEDEAWDLLRQSVVFYCGSPIGTIAANDPSSTSVLNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILYTLQLQSWEKTMD 210 (618)
T ss_pred hHHHHHHHHHHHhhhhhcCccceeEeccCCccccccCCCceeecccHHHHHHHHHCCCHHHHHHHHHHHHhhhhhHHHHH
Confidence 99999999999999999999999999998864456999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCccccccccCCCCCCCcccccCCCCCCCCCCccCCCChHHHHHHHHHHHHHHhCCHhHHHhhhcHHHHHH
Q 006488 237 CHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLSVQERVDVQTGIKM 316 (643)
Q Consensus 237 ~~q~~~GliP~~fKi~~~~~r~~~~~~~~~l~pd~Ge~a~~~ygsVDAtLWwIial~~Y~~~TGD~afl~~l~~~p~i~~ 316 (643)
+||+++|+||++|||.++|+++++..++++|+||||+.+|+|+++|||+|||||++++|.+.|||.+|+++++||++|++
T Consensus 211 ~~q~g~G~mPaSfkv~~~~~~~~~~~~ee~l~aDfGe~AIgRV~pVDS~LWWIIllraY~k~TgD~sf~e~~~~Q~gI~l 290 (618)
T PLN02703 211 CHSPGQGLMPCSFKVKTVPLDGDDSMTEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCTGDLSVQERVDVQTGIKM 290 (618)
T ss_pred hccCCCCCcCceeeecccccccccccccccccCCcCccceeeeccccchhHHHHHHHHHHHhhccHHHhhhhhHHHHHHH
Confidence 99999999999999999999998889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCceeecCCCcccccccCCCCCchhhHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 006488 317 ILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALLSAREMLTPEDGSADLIRALNNRLVALSFHIREY 396 (643)
Q Consensus 317 iL~w~l~~gf~~~~~lLv~dG~~w~D~r~~r~G~pVEIQALwY~AL~~aaeLa~~~~g~~~~a~~l~~ra~~Lk~~~~~~ 396 (643)
||+||+.++|+++|+++|+||++|+|+||+++|||+|||||||.||+++.+|+....+..+.++++..|+.+|+++++++
T Consensus 291 iL~LcLa~~Fd~fPtLlVpDgs~miDRrMgv~G~PLEiQaLfy~ALR~a~~~L~~~~~~~e~i~~i~~rl~~L~~hir~~ 370 (618)
T PLN02703 291 ILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALVCAREMLTPEDGSVDLIRALNNRLVALNFHIREY 370 (618)
T ss_pred HHHHHccCcCCCCceEeccCCCchhccccCcCCccHHHHHHHHHHHHHHHHhcCccchHHHHHHHHhhhhhhhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999876667888999999999999999999
Q ss_pred hhhchhhhhhhhhccccchhhhhhcccCCCCCCCCccccccccCCCceeeecccCCccCcccccccchhhHhcCCCCHHH
Q 006488 397 YWIDMKKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEFMPHIGGYLIGNLQPAHMDFRFFSLGNLWSVVSSLATVDQ 476 (643)
Q Consensus 397 FW~d~~~l~~iyr~~~e~y~~~a~~~~n~~pdsip~~l~~f~~~~ggYL~~~v~p~~~d~r~~slGN~LAL~sglld~eq 476 (643)
||++.++++.||||+||+|+++++|+|||+|++||+||++|||++||||+|||+|+++|||||++||+||+++||++++|
T Consensus 371 yWld~~~ln~iyRykteey~~~A~NkfNi~p~siP~WL~dwlp~~gGYligNv~Pa~mDfRffsLGNlLAILs~Lat~~Q 450 (618)
T PLN02703 371 YWLDLKKINEIYRYQTEEYSYDAVNKFNIYPDQIPSWLVDFMPNRGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLATNDQ 450 (618)
T ss_pred HhhcHHHhhHHHhhhhhhcchhhhhhcccCCCCcchHhhhhccccCceeeeeecccccccchhhhhhHHHHHhcCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhHHHhhccCCCcccCCCcCCCCceeecCCCCCCCCCccccCCCccchHHHHHHHHHHcCCHHHHHHHHHH
Q 006488 477 SHAILDLIEAKWAELVADMPLKICYPALEGQEWRIITGSDPKNTPWSYHNGGSWPTLLWQLTVACIKMNRVEIAEKAVKL 556 (643)
Q Consensus 477 a~~Vv~~l~~~w~~L~tp~gLR~l~P~~~~~~wr~~~~gd~~~~P~sYHNG~VWP~l~~~~a~Al~k~G~~~~A~~ll~~ 556 (643)
+++|++.|+++|++|++.||||+||||+++++||++|+++|+|.||||||||+||+++|++++|++|+|+.+.|+++++.
T Consensus 451 s~aIm~lIe~~w~~Lvg~MPlkIcyPaie~~EWRi~TG~DpKN~PWSYHNGGsWP~LlWf~~aA~iK~Gr~~lA~ral~~ 530 (618)
T PLN02703 451 SHAILDLIEAKWAELVADMPLKICYPAMEGEEWRIITGSDPKNTPWSYHNGGAWPTLLWQLTVASIKMGRPEIAEKAVEL 530 (618)
T ss_pred HHHHHHHHHHHHHHHhccCccccccCCcCCccceeeeCcCCCCCCccccCCCcchHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCccccCCCCCCCCCCCCccchHHHHHHHHHHHHhcCCCCcccccccccHhhHhhhhhhcccCcchhcccc
Q 006488 557 AERHISGDKWPEYYDTKRGRFIGKQSRLYQTWSIAGYLVAKLLLDNPAAAKVLVTEEDSELVNAFSCMISASPRRRKRGR 636 (643)
Q Consensus 557 ~~~~l~~~~~pE~FDG~~g~p~G~~Ac~~QAWSaA~~L~a~~lL~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 636 (643)
+++++..++|||||||++|+|+|++||.+|+||||++|+++++|+||+++++|+++||++.++.|+|.+++++| +|+++
T Consensus 531 ae~rl~~d~WpEYyDGktGr~iGkqar~yQTWSiAGyLlAk~~l~~P~~~~~~~~~e~~~~~~~~~~~~~~~~~-~~~~~ 609 (618)
T PLN02703 531 AERRISLDKWPEYYDTKRARFIGKQARLYQTWSIAGYLVAKLLLANPAAAKFLTSEEDSDLRNAFSCMISANPR-RTRGP 609 (618)
T ss_pred HHHHhhhccChhhccCCCCcCcceeccccCchHHHHHHHHHHHHhChhhccccccccchhhhhhheeecccCCc-ccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998 77777
Q ss_pred c--cccccC
Q 006488 637 K--KQTFIV 643 (643)
Q Consensus 637 ~--~~~~~~ 643 (643)
+ ||+|||
T Consensus 610 ~~~~~~~~~ 618 (618)
T PLN02703 610 KKAQQPFIV 618 (618)
T ss_pred ccccCCccC
Confidence 7 999997
No 2
>PLN02973 beta-fructofuranosidase
Probab=100.00 E-value=1.2e-122 Score=995.62 Aligned_cols=476 Identities=57% Similarity=1.049 Sum_probs=457.3
Q ss_pred ccccccccccccchHHHHHHHHHHHhhccccCCcceeeeccCCCCccccCCCccccchhHHHHHHhhccCChHHHHHHHH
Q 006488 144 GSITNTVHKVWAKSVEDEAWDLLRESIVYYCGNPVGTIAANDPNDSTILNYDQVFIRDFIPSGIAFLLKGEYDIVRNFIL 223 (643)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~A~~~Lr~~~v~~~~~p~G~~Aa~d~~~a~~~~Y~~vfGRDt~Isalg~L~~G~peiaR~~L~ 223 (643)
+|... ..+++...+.++||++|++++|+|+|+|+|||||.|++ +.+.||++||+||++||++++|+.|++|++|+||.
T Consensus 93 ~~~~~-~~~~~~~~~~~~aw~~l~~s~v~~~g~pvgtvAa~d~~-~~~lNY~qVFiRDfVpsaLafLl~Ge~eIVrnFl~ 170 (571)
T PLN02973 93 NTPRS-QPGFESHPMVGEAWDALRRSMVYFRGQPVGTIAAVDNS-EEKLNYDQVFVRDFVPSALAFLMNGEPDIVKNFLL 170 (571)
T ss_pred CCCcc-cccCCCCcHHHHHHHHHHhheEEECCeeeeeeeccCCc-cccccCcchhhhccHHHHHHHHHCCCHHHHHHHHH
Confidence 34433 34688899999999999999999999999999999986 47899999999999999999999999999999999
Q ss_pred HHHhhhhccccccCCCCCCCCCCCccccccccCCCCCCCcccccCCCCCCCCCCccCCCChHHHHHHHHHHHHHHhCCHh
Q 006488 224 HTLQLQSWEKTMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLS 303 (643)
Q Consensus 224 ~~l~LQ~~e~~ld~~q~~~GliP~~fKi~~~~~r~~~~~~~~~l~pd~Ge~a~~~ygsVDAtLWwIial~~Y~~~TGD~a 303 (643)
.+|+||++|+++|+||.++|+||++|||.++|+++ ++.+++|||+.+++++.+|||+|||||+|++|.+.|||.+
T Consensus 171 ~TL~lq~~ektld~~q~g~G~mPaSfkv~~~p~~~-----~e~l~aDfG~~aIGRV~pVDS~LWWIIllraY~k~TgD~s 245 (571)
T PLN02973 171 KTLRLQSWEKKIDRFQLGEGVMPASFKVFHDPVRN-----HETLIADFGESAIGRVAPVDSGFWWIILLRAYTKSTGDSS 245 (571)
T ss_pred HHHhhhhhHHHHHhcccCCCCcCceeeecccccCc-----cccccccccccccccccccchhhHHHHHHHHHHHhccchh
Confidence 99999999999999999999999999999976553 6788999999999999999999999999999999999999
Q ss_pred HHHhhhcHHHHHHHHHHHHhCCCCCCCceeecCCCcccccccCCCCCchhhHHHHHHHHHHHHhhcCCCCCCHHHHHHHH
Q 006488 304 VQERVDVQTGIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALLSAREMLTPEDGSADLIRALN 383 (643)
Q Consensus 304 fl~~l~~~p~i~~iL~w~l~~gf~~~~~lLv~dG~~w~D~r~~r~G~pVEIQALwY~AL~~aaeLa~~~~g~~~~a~~l~ 383 (643)
|++..+||.+|+.+++.|+.++|+++|+++|+||++|+|++|+++|||+|||||||.||+|+.+|+....+..+.++++.
T Consensus 246 ~~e~pevQrgi~lil~lcL~~~Fd~~ptLlVpDgs~miDrrMgv~G~pLeiQaLfy~ALR~a~~~L~~~~~~~~~i~~i~ 325 (571)
T PLN02973 246 LADMPECQKGIRLILSLCLSEGFDTFPTLLCADGCCMIDRRMGVYGYPIEIQALFFMALRCALLLLKHDGEGKEMVEQIV 325 (571)
T ss_pred hhhcHHHHHHHHHHHHHhcccccCCCceEeccCCccccccccccCCccHHHHHHHHHHHHHHHHhcCccchhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999887666778899999
Q ss_pred HHHHHHHHHHHHHhhhchhhhhhhhhccccchhhhhhcccCCCCCCCCccccccccCCCceeeecccCCccCcccccccc
Q 006488 384 NRLVALSFHIREYYWIDMKKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEFMPHIGGYLIGNLQPAHMDFRFFSLGN 463 (643)
Q Consensus 384 ~ra~~Lk~~~~~~FW~d~~~l~~iyr~~~e~y~~~a~~~~n~~pdsip~~l~~f~~~~ggYL~~~v~p~~~d~r~~slGN 463 (643)
+|+.+|+++++++||++.++++.+|||+|++|+++++|+|||+||+||+||++|||++|||++|||+|+++|||||++||
T Consensus 326 ~rl~~L~~hir~~ywld~~~ln~iyRykteey~~~a~NkfNi~p~sip~wl~dwlp~~gGY~igNv~Pa~~DfRffslGN 405 (571)
T PLN02973 326 KRLHALSYHMRSYFWLDLKQLNDIYRYKTEEYSHTAVNKFNVIPDSLPEWVFDFMPPHGGFFIGNVSPARMDFRWFALGN 405 (571)
T ss_pred hhHHHHHHHHHHHHhcCHHHhhhHhhcchhhcchhhhhhccCCccccchhhhhhccCCCceeeeecccccCCcchhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHhcCCCCHHHHHHHHHHHHHhHHHhhccCCCcccCCCcCCCCceeecCCCCCCCCCccccCCCccchHHHHHHHHHH
Q 006488 464 LWSVVSSLATVDQSHAILDLIEAKWAELVADMPLKICYPALEGQEWRIITGSDPKNTPWSYHNGGSWPTLLWQLTVACIK 543 (643)
Q Consensus 464 ~LAL~sglld~eqa~~Vv~~l~~~w~~L~tp~gLR~l~P~~~~~~wr~~~~gd~~~~P~sYHNG~VWP~l~~~~a~Al~k 543 (643)
+||+++||++++|+++|+++|+++|++|++.||||+|||++++.+||++|+++|+|.||||||||+||+++|++++|++|
T Consensus 406 llAILs~Lat~~Qs~aIm~lIe~~w~~Lvg~MPlkicyPaie~~EWri~tG~dpKN~PWSYHNGGsWP~Llw~~~aA~iK 485 (571)
T PLN02973 406 CIAILSSLATPEQSTAIMDLIESRWEELVGEMPLKVCYPAIESHEWRIVTGCDPKNTRWSYHNGGSWPVLLWLLTAACIK 485 (571)
T ss_pred HHHHHhccCCHHHHHHHHHHHHHHHHHHHhcCCcceeccCcCCccceehhccCCCCCccceecCCCccHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHHHHhcCCCCCccccCCCCCCCCCCCCccchHHHHHHHHHHHHhcCCCCcccccccccHhhHhhhhh
Q 006488 544 MNRVEIAEKAVKLAERHISGDKWPEYYDTKRGRFIGKQSRLYQTWSIAGYLVAKLLLDNPAAAKVLVTEEDSELVNAFSC 623 (643)
Q Consensus 544 ~G~~~~A~~ll~~~~~~l~~~~~pE~FDG~~g~p~G~~Ac~~QAWSaA~~L~a~~lL~~P~~~~~~~~~~~~~~~~~~~~ 623 (643)
.|+.+.|+++++.+++++..++|||||||++|+|+|++||.+|+||||++|+++++|+||+++++|+++||++....+.|
T Consensus 486 ~gr~~lA~ral~~ae~rl~~d~WpEyyDGktGr~iGkqar~yQTWSiAG~LlA~~~L~~P~~~~~~~~~e~~~~~~~~~~ 565 (571)
T PLN02973 486 TGRPQIARRAIEVAEARLHKDHWPEYYDGKVGRYVGKQSRKNQTWSVAGYLVAKMMLEDPSHVGMVCLEEDKQMKPVMRR 565 (571)
T ss_pred cCCHHHHHHHHHHHHHHhhhcCChhhcCCCCCcCcceeccccCchHHHHHHHHHHHhhChhhcccccccccccccchhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988877776
Q ss_pred hcc
Q 006488 624 MIS 626 (643)
Q Consensus 624 ~~~ 626 (643)
.-|
T Consensus 566 ~~~ 568 (571)
T PLN02973 566 SNS 568 (571)
T ss_pred ccc
Confidence 543
No 3
>PF12899 Glyco_hydro_100: Alkaline and neutral invertase; InterPro: IPR024746 This is a family of endo-alpha-N-acetylgalactosaminidases. This is a unique enzyme that hydrolyses core 1-type O-glycan from glycoproteins. The proteins are produced in the gut-flora bacteria from Actinobacteria and Firmicutes [].; GO: 0033926 glycopeptide alpha-N-acetylgalactosaminidase activity
Probab=100.00 E-value=1.5e-122 Score=978.41 Aligned_cols=436 Identities=70% Similarity=1.232 Sum_probs=426.7
Q ss_pred HHHHHHHHhhccccCCcceeeeccCCCCccccCCCccccchhHHHHHHhhccCChHHHHHHHHHHHhhhhccccccCCCC
Q 006488 161 EAWDLLRESIVYYCGNPVGTIAANDPNDSTILNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILHTLQLQSWEKTMDCHSP 240 (643)
Q Consensus 161 ~A~~~Lr~~~v~~~~~p~G~~Aa~d~~~a~~~~Y~~vfGRDt~Isalg~L~~G~peiaR~~L~~~l~LQ~~e~~ld~~q~ 240 (643)
+||++|++++|+|+++|+||+||.|+++..+.||++||.||+++|++.+|+.|++|||||||..+++||++++++|+|++
T Consensus 1 ~a~~~l~~s~v~~~g~pvGtvAa~d~~~~~~lNY~qvF~RDfvps~l~fL~~g~~eIVrnFL~~tl~Lq~~~~~~d~~~~ 80 (436)
T PF12899_consen 1 EAWELLERSIVYYQGQPVGTVAALDPSAEEALNYDQVFVRDFVPSALAFLMKGEPEIVRNFLLETLQLQSWEKQVDCFKP 80 (436)
T ss_pred ChHHHHhhheEeeCCceeeeeeecCCcccccccccceEeecChHHHHHHHHcCCHHHHHHHHHHHHhhhhhhhhcccccc
Confidence 59999999999999999999999999876899999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccccccCCCCCCCcccccCCCCCCCCCCccCCCChHHHHHHHHHHHHHHhCCHhHHHhhhcHHHHHHHHHH
Q 006488 241 GQGLMPASFKVRTVPLDGDDSATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLSVQERVDVQTGIKMILKL 320 (643)
Q Consensus 241 ~~GliP~~fKi~~~~~r~~~~~~~~~l~pd~Ge~a~~~ygsVDAtLWwIial~~Y~~~TGD~afl~~l~~~p~i~~iL~w 320 (643)
++|+||+||||.++ .++++|++||||.+|+|+.+|||++||||+|++|.++|||.+|.++.+||.+|+.||+.
T Consensus 81 g~G~mPaSFkv~~~-------~~~e~l~aDfGe~AIgRv~pVDs~~WWiillraY~k~tgD~s~~~~~~~Q~gi~liL~l 153 (436)
T PF12899_consen 81 GRGVMPASFKVLHE-------NEEETLIADFGERAIGRVAPVDSGLWWIILLRAYVKATGDYSLAESPEVQRGIRLILDL 153 (436)
T ss_pred CCCcccceEEEecC-------CCCceEecCcchhhhccccCcccccHHHHHHHHHHHHhcchhhhhcHHHHHHHHHHHHH
Confidence 99999999999874 25789999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCCCCCceeecCCCcccccccCCCCCchhhHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhc
Q 006488 321 CLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALLSAREMLTPEDGSADLIRALNNRLVALSFHIREYYWID 400 (643)
Q Consensus 321 ~l~~gf~~~~~lLv~dG~~w~D~r~~r~G~pVEIQALwY~AL~~aaeLa~~~~g~~~~a~~l~~ra~~Lk~~~~~~FW~d 400 (643)
|+.++|+++|+++|+||++|+|+||+++|||+|||||+|.||||+.+|+....+..+.++++.+|+.+|++++++|||+|
T Consensus 154 cL~~~Fd~~PtLlvpDg~~MiDRrMgv~G~PlEiQ~Lf~~aLr~a~~ll~~~~~~~~~~~~i~~rl~~L~~h~r~~yWld 233 (436)
T PF12899_consen 154 CLADGFDMFPTLLVPDGACMIDRRMGVYGHPLEIQALFYMALRCARELLKPDEEGKDLIERIDKRLHALSFHIREYYWLD 233 (436)
T ss_pred HcccccCCCceEEecCCceeecccccccCCcchHHHHHHHHHHHHHHhcCcccchhHHHHHHHHHHHHHHHHHHHHhccc
Confidence 99999999999999999999999999999999999999999999999999865678899999999999999999999999
Q ss_pred hhhhhhhhhccccchhhhhhcccCCCCCCCCccccccccCCCceeeecccCCccCcccccccchhhHhcCCCCHHHHHHH
Q 006488 401 MKKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEFMPHIGGYLIGNLQPAHMDFRFFSLGNLWSVVSSLATVDQSHAI 480 (643)
Q Consensus 401 ~~~l~~iyr~~~e~y~~~a~~~~n~~pdsip~~l~~f~~~~ggYL~~~v~p~~~d~r~~slGN~LAL~sglld~eqa~~V 480 (643)
.++++.||||+||+|+++++|+|||+||+||+||+||||++|||++||++|+++|+|||++||+||+++||+|++|+++|
T Consensus 234 ~~~ln~iyr~~teey~~~a~N~fNi~p~~ip~wl~dwlp~~gGY~ignv~P~~~dfRff~lGNlLAiLsgLat~~qa~~I 313 (436)
T PF12899_consen 234 LKRLNEIYRYKTEEYGHTAVNKFNIYPDSIPDWLFDWLPEKGGYFIGNVSPARMDFRFFSLGNLLAILSGLATPEQAEAI 313 (436)
T ss_pred HHHHHHHHhccHhhhhhhhhhcccCCcccchHHHHHhcccCCceeEeeccccccceeehhhhhHHHHHhcCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHhhccCCCcccCCCcCCCCceeecCCCCCCCCCccccCCCccchHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 006488 481 LDLIEAKWAELVADMPLKICYPALEGQEWRIITGSDPKNTPWSYHNGGSWPTLLWQLTVACIKMNRVEIAEKAVKLAERH 560 (643)
Q Consensus 481 v~~l~~~w~~L~tp~gLR~l~P~~~~~~wr~~~~gd~~~~P~sYHNG~VWP~l~~~~a~Al~k~G~~~~A~~ll~~~~~~ 560 (643)
++.|+++|++|.++||||+|||++++++||++|+++|+|.||+|||||+||+++|++++|++|.|+.+.|++++..++.+
T Consensus 314 ~~lIe~~~~~L~g~mPlki~yPale~~eWri~tg~dpKN~PwsYHNGG~WP~LlW~~~aA~ik~gr~~lA~~al~~a~~r 393 (436)
T PF12899_consen 314 MDLIEERWEDLVGPMPLKICYPALEGEEWRIYTGCDPKNTPWSYHNGGSWPVLLWFLTAALIKMGRPELAERALEAAENR 393 (436)
T ss_pred HHHHHHHHhhhccccchhhccCCCCCCCCccccCcCcCccccccccCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCCccccCCCCCCCCCCCCccchHHHHHHHHHHHHhcCC
Q 006488 561 ISGDKWPEYYDTKRGRFIGKQSRLYQTWSIAGYLVAKLLLDNP 603 (643)
Q Consensus 561 l~~~~~pE~FDG~~g~p~G~~Ac~~QAWSaA~~L~a~~lL~~P 603 (643)
+.+++|||||||++|+|+|++|+..||||||++|+++++|+||
T Consensus 394 L~~dewpEyydGktGrp~Gkqar~~QTWSaAgyLlA~~~l~~p 436 (436)
T PF12899_consen 394 LSKDEWPEYYDGKTGRPMGKQARKYQTWSAAGYLLAKHLLENP 436 (436)
T ss_pred hcccCCcccccCCCCCcccccccccCchHHHHHHHHHHHhhCc
Confidence 9999999999999999999999999999999999999999998
No 4
>PLN03005 beta-fructofuranosidase
Probab=100.00 E-value=9.3e-122 Score=987.61 Aligned_cols=464 Identities=60% Similarity=1.089 Sum_probs=449.3
Q ss_pred ccccccchHHHHHHHHHHHhhccccCCcceeeeccCCCCccccCCCccccchhHHHHHHhhccCChHHHHHHHHHHHhhh
Q 006488 150 VHKVWAKSVEDEAWDLLRESIVYYCGNPVGTIAANDPNDSTILNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILHTLQLQ 229 (643)
Q Consensus 150 ~~~~~~~~~~~~A~~~Lr~~~v~~~~~p~G~~Aa~d~~~a~~~~Y~~vfGRDt~Isalg~L~~G~peiaR~~L~~~l~LQ 229 (643)
++.++...+.++||++|++++|+|+|+|+||+||.|+++..+.||++||+||++||++++|+.|++|++|+||..+++||
T Consensus 76 ~~~~~~~~~~~~a~~~l~~s~v~~~g~pvGtvAA~d~~~~~~lNY~qvF~RDfvpsaLafLl~Ge~eIVrnFl~~~L~Lq 155 (550)
T PLN03005 76 RNSFEPHPMMAEAWEALRRSMVFFRGQPVGTLAAVDNTTDEVLNYDQVFVRDFVPSALAFLMNGEPDIVKHFLLKTLQLQ 155 (550)
T ss_pred cCCCCCCcHHHHHHHHHHhheEEECCccceeeeecCCccccccCCCceeecccHHHHHHHHHCCCHHHHHHHHHHHHHHh
Confidence 46799999999999999999999999999999999886435699999999999999999999999999999999999999
Q ss_pred hccccccCCCCCCCCCCCccccccccCCCCCCCcccccCCCCCCCCCCccCCCChHHHHHHHHHHHHHHhCCHhHHHhhh
Q 006488 230 SWEKTMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLSVQERVD 309 (643)
Q Consensus 230 ~~e~~ld~~q~~~GliP~~fKi~~~~~r~~~~~~~~~l~pd~Ge~a~~~ygsVDAtLWwIial~~Y~~~TGD~afl~~l~ 309 (643)
++|+++|+||.++|+||++|||.++|+++ ++++++|||+.+++++.+|||+|||||+|++|.+.|||.+|+++.+
T Consensus 156 ~~ek~~d~~q~g~G~mPaSfkv~~~p~~~-----~~~l~aDfG~~aIGRv~pVDS~LWWIIllraY~k~tgD~s~~e~pe 230 (550)
T PLN03005 156 GWEKRVDRFKLGEGVMPASFKVLHDPIRE-----TDNIVADFGESAIGRVAPVDSGFWWIILLRAYTKSTGDLTLSETPE 230 (550)
T ss_pred hhhhhhhcccCCCCCcCceeeecccccCC-----CccccccccccccccccccchhhHHHHHHHHHHhhccchhhhhChH
Confidence 99999999999999999999999976553 5678899999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHhCCCCCCCceeecCCCcccccccCCCCCchhhHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHH
Q 006488 310 VQTGIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALLSAREMLTPEDGSADLIRALNNRLVAL 389 (643)
Q Consensus 310 ~~p~i~~iL~w~l~~gf~~~~~lLv~dG~~w~D~r~~r~G~pVEIQALwY~AL~~aaeLa~~~~g~~~~a~~l~~ra~~L 389 (643)
||.+|+.+|+.|+.++|+++|+++|+||++|+|++|+++|||+|||||||.||+|+.+|+....+..+.++++.+|+.+|
T Consensus 231 vQrgi~lil~lcLa~~Fd~~ptLlvpDgs~miDRrMgv~G~pLeiQaLfy~ALR~~~~~L~~~~~~~~~i~~i~~rl~~L 310 (550)
T PLN03005 231 CQKGMKLILSLCLAEGFDTFPTLLCADGCSMIDRRMGVYGYPIEIQALFFMALRSALSMLKPDGDGREFIERIVKRLHAL 310 (550)
T ss_pred HHHHHHHHHHHhcccccCCCceEeccCCccccccccccCCccHHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999887666778999999999999
Q ss_pred HHHHHHHhhhchhhhhhhhhccccchhhhhhcccCCCCCCCCccccccccCCCceeeecccCCccCcccccccchhhHhc
Q 006488 390 SFHIREYYWIDMKKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEFMPHIGGYLIGNLQPAHMDFRFFSLGNLWSVVS 469 (643)
Q Consensus 390 k~~~~~~FW~d~~~l~~iyr~~~e~y~~~a~~~~n~~pdsip~~l~~f~~~~ggYL~~~v~p~~~d~r~~slGN~LAL~s 469 (643)
+++++++||+|.++++.||||+|++|+++++|+||++|++||+||++|||++|||++|||+|+++|||||++||+||+++
T Consensus 311 ~~h~r~yyWld~~~ln~iyr~kteey~~~a~NkfNi~pd~ip~wl~dwlp~~gGY~igNv~pa~~dfRffslGNllAILs 390 (550)
T PLN03005 311 SFHMRNYFWLDHQNLNDIYRFKTEEYSHTAVNKFNVMPDSIPEWVFDFMPLRGGYFVGNVGPAHMDFRWFALGNCVSILS 390 (550)
T ss_pred HHHHHHheecchhhhhhhhhccHhhhchhhhhccccCCccchhhhhhhcccCCceeeeecccccCCceehhhhhHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHhHHHhhccCCCcccCCCcCCCCceeecCCCCCCCCCccccCCCccchHHHHHHHHHHcCCHHH
Q 006488 470 SLATVDQSHAILDLIEAKWAELVADMPLKICYPALEGQEWRIITGSDPKNTPWSYHNGGSWPTLLWQLTVACIKMNRVEI 549 (643)
Q Consensus 470 glld~eqa~~Vv~~l~~~w~~L~tp~gLR~l~P~~~~~~wr~~~~gd~~~~P~sYHNG~VWP~l~~~~a~Al~k~G~~~~ 549 (643)
||++++|+++|++.|+++|++|++.||||+|||++++.+||++|+++|+|.||||||||+||+++|++++|++|.|+.+.
T Consensus 391 ~Lat~~Qs~aIm~lIe~~w~~Lv~~MPlkIcyPa~e~~eWri~tG~dpKN~PWSYHNGGsWP~Llw~~~aA~iK~gr~~l 470 (550)
T PLN03005 391 SLATPDQSMAIMDLLEHRWEELVGEMPLKICYPCLEGHEWRIVTGCDPKNTRWSYHNGGSWPVLLWQLTAACIKTGRPQI 470 (550)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHhccCCcceeecccCCccceecccCCCCCCCccccCCCcchHHHHHHHHHHHHcCCHHH
Confidence 99999999999999999999999999999999999988999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCCccccCCCCCCCCCCCCccchHHHHHHHHHHHHhcCCCCcccccccccHhhH
Q 006488 550 AEKAVKLAERHISGDKWPEYYDTKRGRFIGKQSRLYQTWSIAGYLVAKLLLDNPAAAKVLVTEEDSELV 618 (643)
Q Consensus 550 A~~ll~~~~~~l~~~~~pE~FDG~~g~p~G~~Ac~~QAWSaA~~L~a~~lL~~P~~~~~~~~~~~~~~~ 618 (643)
|+++++.+++++..++|||||||++|+|+|++||..|+||||++|+++++|++|+++++|+++||++..
T Consensus 471 A~ral~~ae~rl~~d~WpEyydGktGr~iGkqar~~QTWSiAG~Lla~~~L~~P~~~~~~~~~e~~~~~ 539 (550)
T PLN03005 471 ARRAVDLIESRLHRDCWPEYYDGKLGRYVGKQARKYQTWSIAGYLVAKMLLEDPSHIGMISLEEDKLMK 539 (550)
T ss_pred HHHHHHHHHHHhhhcCchhhcCCCCCcccceeccccCchHHHHHHHHHHHhhChhhccccccccccccc
Confidence 999999999999999999999999999999999999999999999999999999999999999988543
No 5
>PF06202 GDE_C: Amylo-alpha-1,6-glucosidase ; InterPro: IPR010401 This family includes human glycogen branching enzyme P35573 from SWISSPROT. This enzyme contains a number of distinct catalytic activities. It has been shown for the yeast homologue O93808 from SWISSPROT that mutations in this region disrupt the enzymes Amylo-alpha-1,6-glucosidase (3.2.1.33 from EC).; GO: 0004135 amylo-alpha-1,6-glucosidase activity, 0005978 glycogen biosynthetic process
Probab=100.00 E-value=2.9e-58 Score=494.30 Aligned_cols=327 Identities=26% Similarity=0.349 Sum_probs=260.5
Q ss_pred CcceeeeccCCCCccccCCCccccchhHHHHHHh-hccCChHHHHHHHHHHHhhhhccccccCCCCCCCCCCCccccccc
Q 006488 176 NPVGTIAANDPNDSTILNYDQVFIRDFIPSGIAF-LLKGEYDIVRNFILHTLQLQSWEKTMDCHSPGQGLMPASFKVRTV 254 (643)
Q Consensus 176 ~p~G~~Aa~d~~~a~~~~Y~~vfGRDt~Isalg~-L~~G~peiaR~~L~~~l~LQ~~e~~ld~~q~~~GliP~~fKi~~~ 254 (643)
++.|.... ||.|||.. ||||++||++++ |..++++.+|++|..+...| .+|+||+.+.
T Consensus 15 ~~~~~~i~-----AG~PWF~~-~GRDt~Isl~gl~l~~~~~~~a~~~L~~~~~~~-----------~~G~ipn~~~---- 73 (370)
T PF06202_consen 15 SEGGPSIA-----AGYPWFST-WGRDTFISLPGLLLSPGRFEEARNILATFAGTQ-----------RHGLIPNELR---- 73 (370)
T ss_pred CCCCceEe-----ccCccccc-cccHHHHHHHHHHhCCCcHHHHHHHHHHHHHhh-----------hcCcccCccc----
Confidence 34555555 89999999 999999999986 67899999999997665322 4799999761
Q ss_pred cCCCCCCCcccccCCCCCCCCCCccCCCChHHHHHHHHHHHHHHhCCHhHHHhhhcHHHHHHHHHHHHhC-CCC--CC-C
Q 006488 255 PLDGDDSATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLSVQERVDVQTGIKMILKLCLAD-GFD--MF-P 330 (643)
Q Consensus 255 ~~r~~~~~~~~~l~pd~Ge~a~~~ygsVDAtLWwIial~~Y~~~TGD~afl~~l~~~p~i~~iL~w~l~~-gf~--~~-~ 330 (643)
. |+. .+||+||+|||||+++++|+++|||.+|++++ .+.|+.||+|+... +|. .. .
T Consensus 74 ---------------~-~~~--~~Y~s~Dat~wfl~~l~~Y~~~t~D~~~l~~~--~~~i~~il~~~~~g~~~~~~~d~~ 133 (370)
T PF06202_consen 74 ---------------D-GEE--PRYNSVDATLWFLIALQEYYRWTGDYSFLREL--YPAIEEILEWYADGTDFGIRVDPE 133 (370)
T ss_pred ---------------C-CCC--CCCCCCccHHHHHHHHHHHHHHhCCHHHHHHH--HHHHHHHHHHHHhCCCCccccccC
Confidence 1 333 46899999999999999999999999999988 99999999999863 221 22 3
Q ss_pred ceeecCC-----Cccccccc------CCCCCchhhHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHhhh
Q 006488 331 TLLVTDG-----SCMIDRRM------GIHGHPLEIQALFYSALLSAREMLTPEDGSADLIRALNNRLVALSFHIREYYWI 399 (643)
Q Consensus 331 ~lLv~dG-----~~w~D~r~------~r~G~pVEIQALwY~AL~~aaeLa~~~~g~~~~a~~l~~ra~~Lk~~~~~~FW~ 399 (643)
++++..| .+|||... ||.|++||||||||+||+++++|+....++ .+..++++|+.|+++|+++||+
T Consensus 134 ~gl~~~~~~~~~~tWmD~~~~g~~~tpr~g~~vEIqal~y~AL~~~~~la~~~~~~--~a~~~~~~A~~lk~~F~~~FW~ 211 (370)
T PF06202_consen 134 DGLIYSGNGLNNQTWMDARNDGRPVTPRDGAAVEIQALWYNALRFAAELAEKFGDE--LAARYREWAERLKESFEKRFWD 211 (370)
T ss_pred CCeeecCCCCCCCCccccccCCccccCCCCcchHHHHHHHHHHHHHHHHHhhcCCc--hHHHHHHHHHHHHHHHHHHHcC
Confidence 4555442 48999753 788999999999999999999999853333 6788999999999999999998
Q ss_pred chhhhhhhhhccccchhhhhhcccCCCCCCCCccccccccCCCceeeecccCC-ccCcccccccch---hhHhcCCCCHH
Q 006488 400 DMKKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEFMPHIGGYLIGNLQPA-HMDFRFFSLGNL---WSVVSSLATVD 475 (643)
Q Consensus 400 d~~~l~~iyr~~~e~y~~~a~~~~n~~pdsip~~l~~f~~~~ggYL~~~v~p~-~~d~r~~slGN~---LAL~sglld~e 475 (643)
++++ |+.+.+++. ..|. ...+|+ ++|++++++++
T Consensus 212 ~~~g----------------------------------------~~~d~ld~~~~~d~--~irpN~~~a~~L~~~~l~~~ 249 (370)
T PF06202_consen 212 EDRG----------------------------------------YYADALDGDKEPDD--SIRPNQLIALSLPPGLLDPE 249 (370)
T ss_pred CCCC----------------------------------------EEEEEecCCCCCCc--ccccCchhHHhcCCccCCHH
Confidence 6544 333334442 2232 133453 35789999999
Q ss_pred HHHHHHHHHHHhHHHhhccCCCcccCCCcCCCCceeecCCCCCCCCCccccCCCccchHHHHHHHHHHcCCH-H----HH
Q 006488 476 QSHAILDLIEAKWAELVADMPLKICYPALEGQEWRIITGSDPKNTPWSYHNGGSWPTLLWQLTVACIKMNRV-E----IA 550 (643)
Q Consensus 476 qa~~Vv~~l~~~w~~L~tp~gLR~l~P~~~~~~wr~~~~gd~~~~P~sYHNG~VWP~l~~~~a~Al~k~G~~-~----~A 550 (643)
+++.|++++.. +|++|+||||++| .++.|+++|.+++..++.|||||+||||++++|+.|++|+|.. + ++
T Consensus 250 ~a~~vl~~~~~---~L~tp~GlRTLs~--~~~~Y~p~y~g~~~~rd~sYHnGsvWpw~~g~~~~al~r~g~~~~~~~~~~ 324 (370)
T PF06202_consen 250 QAKKVLDRVEE---ELLTPWGLRTLSP--SDPRYNPIYEGDQDSRDMSYHNGSVWPWDNGIYAEALLRYGFDEEEAIREA 324 (370)
T ss_pred HHHHHHHHHHH---HcCCCCchhcccC--CCCCcCCCCCCccccCcccccCCCcCcCcHHHHHHHHHHhCccchHHHHHH
Confidence 99999999864 9999999999999 7899999999999999999999999999999999999999983 3 44
Q ss_pred HHHHHHHHHHhc---CCCCCccccCCC-CCCCCCCCCccchHHHHHHHH
Q 006488 551 EKAVKLAERHIS---GDKWPEYYDTKR-GRFIGKQSRLYQTWSIAGYLV 595 (643)
Q Consensus 551 ~~ll~~~~~~l~---~~~~pE~FDG~~-g~p~G~~Ac~~QAWSaA~~L~ 595 (643)
+.+++.+.+++. ..++||+|||.+ ..|.| |++||||+|++||
T Consensus 325 ~~ll~~~~~~~~~~~~~~lpEl~dg~~~~~p~g---c~~QAWS~a~ilr 370 (370)
T PF06202_consen 325 KSLLEGFEEHLQEFGLGRLPELFDGDPPHYPRG---CSPQAWSVAEILR 370 (370)
T ss_pred HHHHHHHHHHHhhccCCCcchhcCCCCCCCCCC---CHHHHHHHHHhhC
Confidence 444554444543 455799999876 55665 5599999999885
No 6
>COG3408 GDB1 Glycogen debranching enzyme [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.4e-48 Score=442.87 Aligned_cols=351 Identities=22% Similarity=0.280 Sum_probs=266.8
Q ss_pred hHHHHHHHHHHHhhccccCCcceeeeccCCCCccccCCCccccchhHHHHHHhhccCChHHHHHHHHHHHhhhhcccccc
Q 006488 157 SVEDEAWDLLRESIVYYCGNPVGTIAANDPNDSTILNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILHTLQLQSWEKTMD 236 (643)
Q Consensus 157 ~~~~~A~~~Lr~~~v~~~~~p~G~~Aa~d~~~a~~~~Y~~vfGRDt~Isalg~L~~G~peiaR~~L~~~l~LQ~~e~~ld 236 (643)
+++++|..+|-.+.+....+..+++|..+ .++||. +||||++||++|+|..|++|+||++|+.++++
T Consensus 249 ~~~~~a~~dl~~~~~~~~~~g~~~~Ag~P----~~~WF~-~fGRD~lIS~lgll~~g~~elArg~L~~~a~~-------- 315 (641)
T COG3408 249 EAFRRAKADLLELTTSTGETGPGLYAGLP----IAHWFS-PFGRDTLISALGLLLVGRFELARGTLNTLARY-------- 315 (641)
T ss_pred HHHHHHHHHHHHHHhhccccCcceEecCC----cchhcc-ccchHHHHHHHHHHhcCCHHHHHHHHHHHHhh--------
Confidence 55666777776655433223456666522 114999 99999999999998669999999999888743
Q ss_pred CCCCCCCCCCCccccccccCCCCCCCcccccCCCCCCCCCCccCCCChHHHHHHHHHHHHHHhCCHhHHHhhhcHHHHHH
Q 006488 237 CHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLSVQERVDVQTGIKM 316 (643)
Q Consensus 237 ~~q~~~GliP~~fKi~~~~~r~~~~~~~~~l~pd~Ge~a~~~ygsVDAtLWwIial~~Y~~~TGD~afl~~l~~~p~i~~ 316 (643)
..+|+||+.+ . ...+ ...+||+||+|+|||+++.+|+++|||.+|++++ ++.+..
T Consensus 316 ---~~~GkIPhe~--~----------------~~~~--~~~~Y~tvD~t~~~i~~~~~y~~~t~d~~~i~e~--~~~v~~ 370 (641)
T COG3408 316 ---SEPGKIPHEI--L----------------LSIP--GEPYYNTVDATPLFIYLLGAYLKYTGDTEFIREL--WPSVGA 370 (641)
T ss_pred ---ccCCCCcchh--h----------------hcCC--CcceeccCCCcHHHHHHHHHHHHHhccHHHHHHH--HHHHHH
Confidence 3889999865 1 1111 1257999999999999999999999999999998 999999
Q ss_pred HHHHHHhCC---CCCCCceeecCC--Ccccccc------cCCCCCchhhHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHH
Q 006488 317 ILKLCLADG---FDMFPTLLVTDG--SCMIDRR------MGIHGHPLEIQALFYSALLSAREMLTPEDGSADLIRALNNR 385 (643)
Q Consensus 317 iL~w~l~~g---f~~~~~lLv~dG--~~w~D~r------~~r~G~pVEIQALwY~AL~~aaeLa~~~~g~~~~a~~l~~r 385 (643)
|++|+.... |+.+..++..+| .+|||.. +++.|.|||||+|||+|++.+..++..+. ..+.++.+.++
T Consensus 371 a~d~~~~~~~~~~~~~~~~l~~~~~~~tW~Ds~~~~~~~~~~~g~pi~i~al~~~~~~a~~~~a~ll~-~~~~~~~~~~~ 449 (641)
T COG3408 371 ALDWILKGFDFGFDTYGDGLLEGGSNQTWMDSGDDIFAVTPRAGKPVAINALQYYALKAALRLANLLG-DEEDAARLEKI 449 (641)
T ss_pred HHHHHHhcCCccceecCcccccCCCCCCCeecCCccccccCCCCCceeHHHHHHHHHHHHHHHHHHhc-ccccHHHHHHH
Confidence 999999643 557777777764 4899875 36799999999999999999998888754 45567788899
Q ss_pred HHHHHHHHHHHhhhchhhhhhhhhccccchhhhhhcccCCCCCCCCccccccccCCCceeeecccCCccCcccccccchh
Q 006488 386 LVALSFHIREYYWIDMKKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEFMPHIGGYLIGNLQPAHMDFRFFSLGNLW 465 (643)
Q Consensus 386 a~~Lk~~~~~~FW~d~~~l~~iyr~~~e~y~~~a~~~~n~~pdsip~~l~~f~~~~ggYL~~~v~p~~~d~r~~slGN~L 465 (643)
|+.|+++|++.||.+ ..++++. .+. +.+| ++|+. +.+- .
T Consensus 450 a~~l~~~F~~~fw~~-~~f~dl~-----------~~~-----~~~~-----------------~r~~~------~~a~-~ 488 (641)
T COG3408 450 ARRLKESFEAKFWNP-TGFYDLA-----------LDD-----KDVP-----------------IRPNF------SNAI-H 488 (641)
T ss_pred HHHHHHHHHHHhhCc-cchHhhh-----------ccC-----CCcc-----------------cCccc------eecc-c
Confidence 999999999999997 3444432 110 0000 12221 1111 1
Q ss_pred hHhcCCCCHHHHHHHHHHHHHhHHHhhccCCCcccCCCcCCCCceeecCCCCCCCCCccccCCCccchHHHHHHHHHHcC
Q 006488 466 SVVSSLATVDQSHAILDLIEAKWAELVADMPLKICYPALEGQEWRIITGSDPKNTPWSYHNGGSWPTLLWQLTVACIKMN 545 (643)
Q Consensus 466 AL~sglld~eqa~~Vv~~l~~~w~~L~tp~gLR~l~P~~~~~~wr~~~~gd~~~~P~sYHNG~VWP~l~~~~a~Al~k~G 545 (643)
.+.+||++++.+ .|++++++ +|+||+||||++| .+|.|+|+.||||+||||++++|+.|+.|+|
T Consensus 489 l~~~gi~~~~~~-~~~~l~e~---~lltp~GlRTLS~------------~dp~Y~p~yYH~GtVWP~~~gifv~g~~r~G 552 (641)
T COG3408 489 LLYTGIVDPERA-VIIRLAEE---DLLTPWGLRTLSP------------DDPRYNPMYYHNGTVWPHDTGIFVLGLRRYG 552 (641)
T ss_pred ccccccCchHHH-HHHHHHHH---hccCCccccccCC------------CCCCcCCCcccCCCcccchHHHHHHHHHHcC
Confidence 247888888766 67777764 9999999999999 2788999999999999999999999999999
Q ss_pred CHH-HHHHHHHHHHHHhcCCCCCccccCCCCC-CCCCCCCccchHHHHHHHHH--HHHhc-CCCCc
Q 006488 546 RVE-IAEKAVKLAERHISGDKWPEYYDTKRGR-FIGKQSRLYQTWSIAGYLVA--KLLLD-NPAAA 606 (643)
Q Consensus 546 ~~~-~A~~ll~~~~~~l~~~~~pE~FDG~~g~-p~G~~Ac~~QAWSaA~~L~a--~~lL~-~P~~~ 606 (643)
..+ ++.++++.+.......+.||+|||..+. |.| |.+||||+|++|++ +.+|. .|+..
T Consensus 553 ~~~~~~~~~~~~~~~~a~~~~~pE~f~g~~~~~P~g---c~~QAWS~a~~l~~~~~~~lg~~p~~~ 615 (641)
T COG3408 553 LKDIQALELFDGLFSSASPGRIPELFDGDSPNRPKG---CYPQAWSSAEILRSLLQGLLGIKPDGF 615 (641)
T ss_pred cccHHHHHHHHHHhhhcccCCCcccccccCCCCCCC---cchhhhhHHHHHHHHHHHHhCCCcCcc
Confidence 877 6666666555444555679999999866 887 55999999998883 55777 77665
No 7
>TIGR01561 gde_arch glycogen debranching enzyme, archaeal type, putative. The seed for this model is composed of two uncharacterized archaeal proteins from Methanosarcina acetivorans and Sulfolobus solfataricus. Trusted cutoff is set so that essentially only archaeal members hit the model. The notable exceptions to archaeal membership are the Gram positive Clostridium perfringens which scores much better than some other archaea and the Cyanobacterium Nostoc sp. which scores just above the trusted cutoff. Noise cutoff is set to exclude the characterized eukaryotic glycogen debranching enzyme in S. cerevisiae. These cutoffs leave the prokaryotes Porphyromonas gingivalis and Deinococcus radiodurans below trusted but above noise. Multiple alignments including these last two species exhibit sequence divergence which may suggest a subtly different function for these prokaryotic proteins.
Probab=100.00 E-value=4e-48 Score=434.31 Aligned_cols=268 Identities=23% Similarity=0.254 Sum_probs=218.4
Q ss_pred ccccCCCccccchhHHHHHHh-hccCChHHHHHHHHHHHhhhhccccccCCCCCCCCCCCccccccccCCCCCCCccccc
Q 006488 189 STILNYDQVFIRDFIPSGIAF-LLKGEYDIVRNFILHTLQLQSWEKTMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVL 267 (643)
Q Consensus 189 a~~~~Y~~vfGRDt~Isalg~-L~~G~peiaR~~L~~~l~LQ~~e~~ld~~q~~~GliP~~fKi~~~~~r~~~~~~~~~l 267 (643)
||-|||.. ||||++||++|+ |.+|+++.||++|+.+++ +. .+|+|||.|
T Consensus 286 AGypwF~~-WGRDt~Isl~Gl~l~tgr~~~A~~iL~~fa~----------~~-~~GliPN~~------------------ 335 (575)
T TIGR01561 286 AGYHWFDD-WGRDSFISLEGLLLIDKQFDEAKEAILKFAN----------LC-KRGLIPNNF------------------ 335 (575)
T ss_pred ecCchhcc-chhHHHHHHHHHHhcCCcHHHHHHHHHHHHH----------Hh-HCCCCCCcc------------------
Confidence 56677765 999999999997 468999999999987763 32 789999987
Q ss_pred CCCCCCCCCCccCCCChHHHHHHHHHHHHHHhCCHhHHHhhhcHHHHHHHHHHHHh-CCCCCC--CceeecCC--Ccccc
Q 006488 268 DPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLSVQERVDVQTGIKMILKLCLA-DGFDMF--PTLLVTDG--SCMID 342 (643)
Q Consensus 268 ~pd~Ge~a~~~ygsVDAtLWwIial~~Y~~~TGD~afl~~l~~~p~i~~iL~w~l~-~gf~~~--~~lLv~dG--~~w~D 342 (643)
|+.|.. ++||+||||||||+++++|+++|||.++++++ +|.++.||+++.. ++|..+ +.+++..| .+|||
T Consensus 336 -~~~g~~--p~YntvDAtLWfi~al~~Y~~~tgD~~~l~~l--~p~l~~ii~~y~~G~~~~i~~d~dGLi~~g~~lTWMD 410 (575)
T TIGR01561 336 -IAFGGD--PIYNGVDASLWAIHAIDKTFAYSQDFLFIRDV--VDKVLDIIDNYCAGNDFAIGMDNDLIFHKGAPLTWMD 410 (575)
T ss_pred -CCCCCC--ccCCCchHHHHHHHHHHHHHHHhCCHHHHHHH--HHHHHHHHHHHhcCCCcEEEECCCccEeCCCCCCCCC
Confidence 444433 47899999999999999999999999999987 9999999999875 345432 44666665 58999
Q ss_pred cc------cCCCCCchhhHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhhhccccchh
Q 006488 343 RR------MGIHGHPLEIQALFYSALLSAREMLTPEDGSADLIRALNNRLVALSFHIREYYWIDMKKLNEIYRYKTEEYS 416 (643)
Q Consensus 343 ~r------~~r~G~pVEIQALwY~AL~~aaeLa~~~~g~~~~a~~l~~ra~~Lk~~~~~~FW~d~~~l~~iyr~~~e~y~ 416 (643)
.+ .||.|+|||||||||+||+.+++|++..++. +..+.+.|++|+++|+++||+++.+
T Consensus 411 a~~g~~~~tPR~G~~VEInALwYnAL~~~a~la~~~g~~---a~~y~~~A~~lk~~F~~~FW~~~~g------------- 474 (575)
T TIGR01561 411 AKVDERAVTPRAGAACEINALWYNALKTAEFLGNELGED---AESLEEKAAGVAKNFAEKFINPDGN------------- 474 (575)
T ss_pred CCCCCccCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcc---HHHHHHHHHHHHHHHHHhcCCCCCC-------------
Confidence 75 4799999999999999999999999875432 4568889999999999999986433
Q ss_pred hhhhcccCCCCCCCCccccccccCCCceeeecccCCcc-----Ccccccccch-hh--HhcCCCCHH-HHHHHHHHHHHh
Q 006488 417 YDAVNKFNIYPDQIPPWLVEFMPHIGGYLIGNLQPAHM-----DFRFFSLGNL-WS--VVSSLATVD-QSHAILDLIEAK 487 (643)
Q Consensus 417 ~~a~~~~n~~pdsip~~l~~f~~~~ggYL~~~v~p~~~-----d~r~~slGN~-LA--L~sglld~e-qa~~Vv~~l~~~ 487 (643)
|+++.+++... | ..+.+|+ +| +.+++++++ ++++|++.+..
T Consensus 475 ---------------------------~l~D~v~~d~~~~~~~d--~s~RPNql~A~sL~~~ll~~~~~~~~vl~~v~~- 524 (575)
T TIGR01561 475 ---------------------------CLFDLIHQDEAGNQVKD--KAIRPNQIFAISLPFPIIDDESIAKAILDLIEK- 524 (575)
T ss_pred ---------------------------eeEEEEecCCCCCcccc--cccCCCceeHhhCCCCCCCHHHHHHHHHHHHHh-
Confidence 33333322111 2 1233553 33 467999999 99999998875
Q ss_pred HHHhhccCCCcccCCCcCCCCceeecCCCCCCCCCccccCCCccchHHHHHHHH
Q 006488 488 WAELVADMPLKICYPALEGQEWRIITGSDPKNTPWSYHNGGSWPTLLWQLTVAC 541 (643)
Q Consensus 488 w~~L~tp~gLR~l~P~~~~~~wr~~~~gd~~~~P~sYHNG~VWP~l~~~~a~Al 541 (643)
+|+||+|||||+| .++.|+++|.|++..|+.+||||+||||++|.|+.|+
T Consensus 525 --~Lltp~GlRTLsp--~d~~Y~p~Y~g~~~~Rd~aYHqGtvWpwl~G~y~~A~ 574 (575)
T TIGR01561 525 --DLLRPFGLKSLSR--DDPLYKGQYKGDALSRDTAYHNGSLPPWLHGALVKAR 574 (575)
T ss_pred --hccCCcccccCCC--CCCCcCCCCCCCccccCCcCcCCCcCccchhhHHhhc
Confidence 9999999999999 8999999999999999999999999999999999985
No 8
>TIGR01531 glyc_debranch glycogen debranching enzymye. glycogen debranching enzyme possesses two different catalytic activities; oligo-1,4--1,4-glucantransferase (EC 2.4.1.25) and amylo-1,6-glucosidase (EC 3.2.1.33). Site directed mutagenesis studies in S. cerevisiae indicate that the transferase and glucosidase activities are independent and located in different regions of the polypeptide chain. Proteins in this model belong to the larger alpha-amylase family. The model covers eukaryotic proteins with a seed composed of human, nematode and yeast sequences. Yeast seed sequence is well characterized. The model is quite rigorous; either query sequence yields large bit score or it fails to hit the model altogether. There doesn't appear to be any middle ground.
Probab=100.00 E-value=1.8e-46 Score=442.41 Aligned_cols=343 Identities=18% Similarity=0.224 Sum_probs=250.8
Q ss_pred ccccCCC----ccccchhHHHHHHh-hccCChHHHHHHHHHHHhhhhccccccCCCCCCCCCCCccccccccCCCCCCCc
Q 006488 189 STILNYD----QVFIRDFIPSGIAF-LLKGEYDIVRNFILHTLQLQSWEKTMDCHSPGQGLMPASFKVRTVPLDGDDSAT 263 (643)
Q Consensus 189 a~~~~Y~----~vfGRDt~Isalg~-L~~G~peiaR~~L~~~l~LQ~~e~~ld~~q~~~GliP~~fKi~~~~~r~~~~~~ 263 (643)
||-|||. .+||||++||++|+ |.+|+++.||++|+.++.. ..+|+|||.+
T Consensus 1025 AGyPwF~tg~mr~WGRDTfISLrGLlL~tGR~~eAk~ii~~fa~~-----------lr~GLIPNll-------------- 1079 (1464)
T TIGR01531 1025 AGLPHFSVGYMRCWGRDTFIALRGMLLTTGRFDEARAIILAFAGT-----------LRHGLIPNLL-------------- 1079 (1464)
T ss_pred ecCCccccCcccccchhheeecCcceeccCCHHHHHHHHHHHHHH-----------HHcCCCCCCC--------------
Confidence 6778887 79999999999996 6799999999999877621 4789999977
Q ss_pred ccccCCCCCCCCCCccCCCChHHHHHHHHHHHHHHhCC-HhHHHhh--------------------hcHHHHHHHHHHHH
Q 006488 264 EEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGD-LSVQERV--------------------DVQTGIKMILKLCL 322 (643)
Q Consensus 264 ~~~l~pd~Ge~a~~~ygsVDAtLWwIial~~Y~~~TGD-~afl~~l--------------------~~~p~i~~iL~w~l 322 (643)
++ |.. ++|+++||+||||.++++|+++++| .+++++. .+.+.|+.||+++.
T Consensus 1080 -----~~-G~~--prYNt~DA~lWfi~AIqdY~~~~~dg~~iL~~~v~R~fp~Ddt~~~~~~~~~~~l~~~iqeIl~~h~ 1151 (1464)
T TIGR01531 1080 -----DE-GIN--PRYNCRDAAWFWLQCIQDYVEIVPNGEKILKDPVRRIYPDDDSIPVDDGRADQYLFEVIYEALQKHF 1151 (1464)
T ss_pred -----CC-CCc--ccccCccHHHHHHHHHHHHHHHcCCHHHhhhccccccccccccccccchhHHHHHHHHHHHHHHHHH
Confidence 33 433 3689999999999999999999999 4442110 24889999999998
Q ss_pred hC-CC------------------CC----C-CceeecCC-----Ccccc-------cc------cCCCCCchhhHHHHHH
Q 006488 323 AD-GF------------------DM----F-PTLLVTDG-----SCMID-------RR------MGIHGHPLEIQALFYS 360 (643)
Q Consensus 323 ~~-gf------------------~~----~-~~lLv~dG-----~~w~D-------~r------~~r~G~pVEIQALwY~ 360 (643)
.+ .| +. . .++++-.| .|||| ++ .||.|+|||||||||+
T Consensus 1152 ~G~~fRE~NAGp~iD~~M~deGfn~~I~vD~~~GLI~gGn~~ncgTWMDkmg~SekA~~~G~p~TPRdG~aVEInaLwyn 1231 (1464)
T TIGR01531 1152 QGIQFRERNAGPQIDRVMTDEGFNVTIGVDWETGFIYGGNRFNCGTWMDKMGESEKAGNKGIPATPRDGAAVEIVGLLKS 1231 (1464)
T ss_pred cCCccccccccccchhhhccccccceEEEcCCCCcEecCCCCCCCCCcCCCCcccccccCCcccCCCCCCceeHHHHHHH
Confidence 53 23 11 1 34454443 39999 22 3899999999999999
Q ss_pred HHHHHHhhcCCC----CCCHHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhhhccccchhhhhhcccCCCCCCCCccccc
Q 006488 361 ALLSAREMLTPE----DGSADLIRALNNRLVALSFHIREYYWIDMKKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVE 436 (643)
Q Consensus 361 AL~~aaeLa~~~----~g~~~~a~~l~~ra~~Lk~~~~~~FW~d~~~l~~iyr~~~e~y~~~a~~~~n~~pdsip~~l~~ 436 (643)
||+++++|.+.. .+.......+.+.++.++.+|.+.||+++.. ..+|+.. ...+|...||-|..+.
T Consensus 1232 AL~~~~~l~~~~~~~~~g~~~~~~~~~~wa~~ik~~Fe~~F~~~~~~-~~lyDv~-----~~~vnrrgIykD~~~s---- 1301 (1464)
T TIGR01531 1232 ALRFLIELKEKGVFKRSGVETQKWSYIEWNQKIQDNFEKRFFVDESQ-DADYDVA-----KLGVNRRGIYKDSYGS---- 1301 (1464)
T ss_pred HHHHHHHHHHhcCcCcCCcccchhhHHHHHHHHHHHHhhhcCCCccc-Ccccccc-----chhhccccccccccCC----
Confidence 999999998752 1322223347778888999999999984311 1112111 0123334444433210
Q ss_pred cccCCCceeeecccCCccCcccccccch---hhHhcCCCCHHHHHHHHHHHHHhHHHhhccCCCcccCCCcCCCCceeec
Q 006488 437 FMPHIGGYLIGNLQPAHMDFRFFSLGNL---WSVVSSLATVDQSHAILDLIEAKWAELVADMPLKICYPALEGQEWRIIT 513 (643)
Q Consensus 437 f~~~~ggYL~~~v~p~~~d~r~~slGN~---LAL~sglld~eqa~~Vv~~l~~~w~~L~tp~gLR~l~P~~~~~~wr~~~ 513 (643)
-.| ..|.+ ..+|+ +++...++++++++++++.+ + +|++|+|||||.| .|+.|+++|
T Consensus 1302 ------------~~~-~~D~q--lRPN~~iA~sla~~l~~~~~a~~~L~~v-~---~LltP~GlRTLdP--~D~~Y~g~Y 1360 (1464)
T TIGR01531 1302 ------------TKP-WTDYQ--LRPNFAIAMTVAPELFVPEKAWKALTIA-E---VLLGPLGMKTLDP--SDWNYRGYY 1360 (1464)
T ss_pred ------------CCC-CCCcc--cCCCceEEEeCCcccCCHHHHHHHHHHH-H---HhccCCccccCCC--CCcCCCCcc
Confidence 001 01221 34564 24578899999999999999 5 8999999999999 899999999
Q ss_pred CCCCCCCCC------ccccCCCccchHHHHHHHHHHcCCH----H------HHHHHHHHHHHHhcCCC---CCccccCCC
Q 006488 514 GSDPKNTPW------SYHNGGSWPTLLWQLTVACIKMNRV----E------IAEKAVKLAERHISGDK---WPEYYDTKR 574 (643)
Q Consensus 514 ~gd~~~~P~------sYHNG~VWP~l~~~~a~Al~k~G~~----~------~A~~ll~~~~~~l~~~~---~pE~FDG~~ 574 (643)
.++...++. +||||++|||++|.|+.|++|.... . .+.+.+.....++..++ +||+|||+.
T Consensus 1361 ~g~~dsrD~~t~kg~aYHqG~eW~WllG~fl~A~lk~~~~~~~~~~~~~~~~~~~~L~~~~~~l~~~~~g~l~El~dgdg 1440 (1464)
T TIGR01531 1361 NNGEDSDDFATAKGRNYHQGPEWVWPIGYFLRARLHFHFKTGPRCQAAAIKPVSYLLQQLYYHLKESPWRGLPELTNKDG 1440 (1464)
T ss_pred CCchhhccccccccccccCCCcCccchhHHHHHHHHhccccccchhhHHHHHHHHHHHHHHHHHHhcCCCCcccccCCCC
Confidence 999998887 9999999999999999999996432 1 23444555666676554 699999976
Q ss_pred -CCCCCCCCCccchHHHHHHHHHHH
Q 006488 575 -GRFIGKQSRLYQTWSIAGYLVAKL 598 (643)
Q Consensus 575 -g~p~G~~Ac~~QAWSaA~~L~a~~ 598 (643)
..|.||+ .||||+|++|++..
T Consensus 1441 p~~~~gc~---aQAWSvaelLr~l~ 1462 (1464)
T TIGR01531 1441 EYCNDSCP---TQAWSVACLLELLY 1462 (1464)
T ss_pred CCCCCCCH---HHHHHHHHHHHHHh
Confidence 4566655 99999999999853
No 9
>PRK10137 alpha-glucosidase; Provisional
Probab=100.00 E-value=3.3e-34 Score=328.87 Aligned_cols=369 Identities=14% Similarity=0.074 Sum_probs=272.2
Q ss_pred ccccchHHHHHHHHHHHhhccccCCc-------ceeeeccCCCCccccCCCc--cccchhHHHHHHhhccCChHHHHHHH
Q 006488 152 KVWAKSVEDEAWDLLRESIVYYCGNP-------VGTIAANDPNDSTILNYDQ--VFIRDFIPSGIAFLLKGEYDIVRNFI 222 (643)
Q Consensus 152 ~~~~~~~~~~A~~~Lr~~~v~~~~~p-------~G~~Aa~d~~~a~~~~Y~~--vfGRDt~Isalg~L~~G~peiaR~~L 222 (643)
+-+..++..+|.+.|+.+ -+. .|++++ ++++||+. .|+||+.+++++++.. +||+|++.|
T Consensus 303 ~~~~~~l~~kA~~~L~~N-----wr~~~g~~~~~~t~Ps-----~gl~Wf~~~~~W~WDS~~~A~~la~f-dpelA~~~l 371 (786)
T PRK10137 303 TPEQTRVAVKAMETLNGN-----WRSPAGAVKFNTVTPS-----VTARWFSGNQTWPWDTWKQAYAMAHF-NPDVAKENI 371 (786)
T ss_pred CHHHHHHHHHHHHHHHHh-----ccccccccccCceEeC-----CCCCCCCCCCccchHHHHHHHHHhhc-CHHHHHHHH
Confidence 445667888999999984 333 346666 78999999 9999999999998765 899999999
Q ss_pred HHHHhhhhccccccCCCC-CCCCCCCccccccccCCCCCCCcccccCCC-CCCCCCCccCC-CChHHHHHHHHHHHHHHh
Q 006488 223 LHTLQLQSWEKTMDCHSP-GQGLMPASFKVRTVPLDGDDSATEEVLDPD-FGEAAIGRVAP-VDSGLWWIILLRAYGKCS 299 (643)
Q Consensus 223 ~~~l~LQ~~e~~ld~~q~-~~GliP~~fKi~~~~~r~~~~~~~~~l~pd-~Ge~a~~~ygs-VDAtLWwIial~~Y~~~T 299 (643)
+.++..|.+ ..|..++ .+|+||+.+ .+.+ -|+ .|+.+.+ ++ +=..+.+.+++.+++++|
T Consensus 372 r~Lf~~Q~~--~~d~~r~~~~G~Iph~v--f~~~------------~p~R~g~~~~~--ne~~tqPPL~a~av~~vy~~t 433 (786)
T PRK10137 372 RAVFSWQIQ--PDDSVRPQDVGFVPDLI--AYNL------------SPERGGDGGNW--NERNTKPSLAAWSVMEVYNVT 433 (786)
T ss_pred HHHHHhhcc--ccCCCCcCCCCeeeEEe--ccCC------------Ccccccccccc--cCCCcCcCHHHHHHHHHHHHh
Confidence 999999984 3477775 689999743 2211 122 3333221 22 223589999999999999
Q ss_pred CCHhHHHhhhcHHHHHHHHHHHHhC------CCCCCC---------------------------ceeec-----------
Q 006488 300 GDLSVQERVDVQTGIKMILKLCLAD------GFDMFP---------------------------TLLVT----------- 335 (643)
Q Consensus 300 GD~afl~~l~~~p~i~~iL~w~l~~------gf~~~~---------------------------~lLv~----------- 335 (643)
+|.+|++++ +|.+.+.++|+... |+.+|. .++.+
T Consensus 434 ~d~~fl~~l--yPkL~a~h~Ww~~~RD~dg~Gl~eY~~~~~~~h~~~~g~~~~~i~~~~~~~~~~G~~n~~~~~~~~~~~ 511 (786)
T PRK10137 434 QDKAWLAEM--YPKLVAYHDWWLRNRDHNGNGVPEYGATRDKAHNTESGEMLFTVKKGDKEETQSGLNNYARVVEKGQYD 511 (786)
T ss_pred CCHHHHHHH--HHHHHHHHHHHHhcCCCCCCceeEeeccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999998 99999999999853 333321 01111
Q ss_pred ---------CCC-cccc------c-------cc------------------CCC----CC-----chhhHHHHHHHHHHH
Q 006488 336 ---------DGS-CMID------R-------RM------------------GIH----GH-----PLEIQALFYSALLSA 365 (643)
Q Consensus 336 ---------dG~-~w~D------~-------r~------------------~r~----G~-----pVEIQALwY~AL~~a 365 (643)
.|. +=|| . ++ ... ++ +|++|+|.|.+.+.+
T Consensus 512 ~~~~~~~~~~~WESGmDNap~f~~i~~~~~~~y~r~~y~r~~~~V~~~~~~~~dg~l~~~p~~~e~VDLNsyLy~a~~~L 591 (786)
T PRK10137 512 SLEIPAQVAASWESGRDDAAVFGFIDKEQLDKYVANGGKRSDWTVKFAENRSQDGTLLGYSLLQESVDQASYMYSDNHYL 591 (786)
T ss_pred cccccccccCCCCCCCCCccccccccccccchhhhccccccceeeeehhcccCCCCccCCCCcCCCHHHHHHHHHHHHHH
Confidence 110 1122 0 00 011 22 689999999999999
Q ss_pred HhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhhhccccchhhhhhcccCCCCCCCCccccccccCCCcee
Q 006488 366 REMLTPEDGSADLIRALNNRLVALSFHIREYYWIDMKKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEFMPHIGGYL 445 (643)
Q Consensus 366 aeLa~~~~g~~~~a~~l~~ra~~Lk~~~~~~FW~d~~~l~~iyr~~~e~y~~~a~~~~n~~pdsip~~l~~f~~~~ggYL 445 (643)
++|++.+ |+.+.+++++++|+.|+..|++.||+++.++|..|+..++.. .+ ++
T Consensus 592 A~LAe~L-G~~e~A~~~~~~A~~Lr~aIn~~~WDee~GfY~DydL~~~~~-----------------------~~-~~-- 644 (786)
T PRK10137 592 AEMATIL-GKPEEAKRYRQLAQQLADYINTCMFDETTGFYYDVRIEDKPL-----------------------AN-GC-- 644 (786)
T ss_pred HHHHHHh-CChHHHHHHHHHHHHHHHHHHHHccCCcCCeEEEEecCcccc-----------------------cc-cc--
Confidence 9999986 556778899999999999999999999888765443221100 00 00
Q ss_pred eecccCCccCcccccccchhhHhcCCCCHHHHHHHHHHHHHhHHHhhccCCCcccCCCcCCCCceeecCCCCCCCCCccc
Q 006488 446 IGNLQPAHMDFRFFSLGNLWSVVSSLATVDQSHAILDLIEAKWAELVADMPLKICYPALEGQEWRIITGSDPKNTPWSYH 525 (643)
Q Consensus 446 ~~~v~p~~~d~r~~slGN~LAL~sglld~eqa~~Vv~~l~~~w~~L~tp~gLR~l~P~~~~~~wr~~~~gd~~~~P~sYH 525 (643)
.-.|. ..+..+.+++++|++|+++++|+++|++.|... ..+.+++|++++.+ .++.++|..||
T Consensus 645 --~g~~i--~~~~~~~agf~PLwaGia~~eqA~~VV~~L~~p-~~F~t~~GipTlS~------------s~p~ydp~~YW 707 (786)
T PRK10137 645 --AGKPI--VERGKGPEGWSPLFNGAATQANADAVVKVMLDP-KEFNTFVPLGTAAL------------TNPAFGADIYW 707 (786)
T ss_pred --cCcce--eeeccCccchhhccCCCCCHHHHHHHHHHhcCh-hhcCCCCCccCcCC------------CccccCCCCCC
Confidence 00010 111234567789999999999999999999753 35667889998766 36788899999
Q ss_pred cCCCccchHHHHHHHHHHcCCHHHHHHHHHHHHH----HhcCCCCCccccCCCCCCCCCCCCccchHHHHHHHHHHH
Q 006488 526 NGGSWPTLLWQLTVACIKMNRVEIAEKAVKLAER----HISGDKWPEYYDTKRGRFIGKQSRLYQTWSIAGYLVAKL 598 (643)
Q Consensus 526 NG~VWP~l~~~~a~Al~k~G~~~~A~~ll~~~~~----~l~~~~~pE~FDG~~g~p~G~~Ac~~QAWSaA~~L~a~~ 598 (643)
||+|||+++|+++.||.++|+.++|+++...+.+ .....++.|+||..+|++.|+. .|+||+|.+|+++.
T Consensus 708 RGpVWpp~N~Li~~GL~rYG~~e~A~~La~~ll~~a~~l~~tG~~~E~YDp~TGeg~Ga~---~FSWTAAvlLml~~ 781 (786)
T PRK10137 708 RGRVWVDQFYFGLKGMERYGYRDDALKLADTFFRHAKGLTADGPIQENYNPLTGAQQGAP---NFSWSAAHLYMLYN 781 (786)
T ss_pred CCCcCHhHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCceEEeECCCCCcccCCC---CCChHHHHHHHHHH
Confidence 9999999999999999999999999998866544 4467789999999999999877 99999999888764
No 10
>KOG3625 consensus Alpha amylase [Carbohydrate transport and metabolism]
Probab=99.92 E-value=1.7e-24 Score=243.88 Aligned_cols=341 Identities=22% Similarity=0.295 Sum_probs=228.3
Q ss_pred CCCccccchhHHHHHHhh-ccCChHHHHHHHHHHHhhhhccccccCCCCCCCCCCCccccccccCCCCCCCcccccCCCC
Q 006488 193 NYDQVFIRDFIPSGIAFL-LKGEYDIVRNFILHTLQLQSWEKTMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDF 271 (643)
Q Consensus 193 ~Y~~vfGRDt~Isalg~L-~~G~peiaR~~L~~~l~LQ~~e~~ld~~q~~~GliP~~fKi~~~~~r~~~~~~~~~l~pd~ 271 (643)
+|..+||||++|++.|+| .+|+...||++++.|+ ++ ...|+|||-. +-
T Consensus 1078 g~mRcWGRDtFIaLrG~ll~TGRy~EAr~iIlaFa------~t-----lrHGLIPNLL--------------------d~ 1126 (1521)
T KOG3625|consen 1078 GIMRCWGRDTFIALRGILLITGRYVEARNIILAFA------GT-----LRHGLIPNLL--------------------DE 1126 (1521)
T ss_pred hhhhhcccceeeecccceEeecchHHHHHHHHHHH------HH-----hhccccchhh--------------------hc
Confidence 566899999999999974 7999999999998776 22 5789999843 11
Q ss_pred CCCCCCccCCCChHHHHHHHHHHHHHHhCCH-hHHHh--------------------hhcHHHHHHHHHHHHh-------
Q 006488 272 GEAAIGRVAPVDSGLWWIILLRAYGKCSGDL-SVQER--------------------VDVQTGIKMILKLCLA------- 323 (643)
Q Consensus 272 Ge~a~~~ygsVDAtLWwIial~~Y~~~TGD~-afl~~--------------------l~~~p~i~~iL~w~l~------- 323 (643)
| -.+||++=||+.||+..+++|++...+- ++++. ..+...|..||+-...
T Consensus 1127 G--~~~RyNcRDA~W~wl~~Iq~Yve~vPnG~~ILkd~VsRiyP~DDs~v~~pgaf~q~L~evi~Eal~kH~qGiqfREr 1204 (1521)
T KOG3625|consen 1127 G--IYARYNCRDAVWWWLQCIQDYVEMVPNGLDILKDPVSRIYPTDDSAVLPPGAFDQPLFEVIQEALQKHFQGIQFRER 1204 (1521)
T ss_pred c--ccccccchHHHHHHHHHHHHHHHhCCChhhhhhCchheeCCCCCcccCCCchhhHHHHHHHHHHHHHHhccccchhc
Confidence 1 2358999999999999999998764321 11111 0124556666655542
Q ss_pred ------------CCCCCC-----CceeecCCC-----ccccccc--------------CCCCCchhhHHHHHHHHHHHHh
Q 006488 324 ------------DGFDMF-----PTLLVTDGS-----CMIDRRM--------------GIHGHPLEIQALFYSALLSARE 367 (643)
Q Consensus 324 ------------~gf~~~-----~~lLv~dG~-----~w~D~r~--------------~r~G~pVEIQALwY~AL~~aae 367 (643)
+||+.. .++++-.|. +|||. | ||.|..||||+|-|.|||++.+
T Consensus 1205 nAGpqiD~~M~DeGFnv~~gV~~~TGfv~GGn~~NCGTWMDK-MGeSerAgnkG~PaTPRDGsAVEi~GL~~salrfl~e 1283 (1521)
T KOG3625|consen 1205 NAGPQIDRNMKDEGFNVTAGVDEETGFVYGGNRFNCGTWMDK-MGESERAGNKGIPATPRDGSAVEIVGLSKSALRFLLE 1283 (1521)
T ss_pred cCCcccchhhhccCcceeeccccccceeecCCccccchhhhh-cccchhccCCCCCCCCCCCceeehhhhHHHHHHHHHH
Confidence 133322 355555543 89985 4 5788889999999999999999
Q ss_pred hcCCC----------C-CCHHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhhhccccchhhhhhcccCCCCCCCCccccc
Q 006488 368 MLTPE----------D-GSADLIRALNNRLVALSFHIREYYWIDMKKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVE 436 (643)
Q Consensus 368 La~~~----------~-g~~~~a~~l~~ra~~Lk~~~~~~FW~d~~~l~~iyr~~~e~y~~~a~~~~n~~pdsip~~l~~ 436 (643)
|.+.. + |....+ .+.+.+..|+.+|.+.|.+++.... ..+-....+|+..||-|+.-
T Consensus 1284 lkek~ifpy~~Ve~k~~g~~~k~-s~~eW~qkiqdNFeK~ffV~ed~s~------~~~~~~~~vnkr~IykDsyg----- 1351 (1521)
T KOG3625|consen 1284 LKEKNIFPYHGVEVKRHGKAIKW-SYDEWNQKIQDNFEKLFFVSEDPSD------LNEKHPNLVNKRGIYKDSYG----- 1351 (1521)
T ss_pred HHhcCCccccceEEeccccccee-cHHHHHHHHHhhhhheecccCCcch------hhhhcccccchhheeccccc-----
Confidence 98751 0 111112 2566677789999999998765420 01112234556556555511
Q ss_pred cccCCCceeeecccCCccCcccccccch---hhHhcCCCCHHHHHHHHHHHHHhHHHhhccCCCcccCCCcCCCCceeec
Q 006488 437 FMPHIGGYLIGNLQPAHMDFRFFSLGNL---WSVVSSLATVDQSHAILDLIEAKWAELVADMPLKICYPALEGQEWRIIT 513 (643)
Q Consensus 437 f~~~~ggYL~~~v~p~~~d~r~~slGN~---LAL~sglld~eqa~~Vv~~l~~~w~~L~tp~gLR~l~P~~~~~~wr~~~ 513 (643)
. .-...|++ ..+|+ |++.-.+.+++.|-+.++..++ -|++|.|||++-| +|..|+++|
T Consensus 1352 ---------a---t~~~tDyQ--LR~NF~IamtVAPeL~~pe~A~kAle~Aek---vLlGPlGMkTlDP--~D~nYr~yY 1412 (1521)
T KOG3625|consen 1352 ---------A---TSPWTDYQ--LRPNFTIAMTVAPELFTPEKAWKALEIAEK---VLLGPLGMKTLDP--DDWNYRGYY 1412 (1521)
T ss_pred ---------C---CCCcccee--ccCCceeEEEechhhcChHHHHHHHHHHHH---HhcCcccccccCh--hhccccccc
Confidence 0 11223433 23443 3445566789999888888775 8999999999999 789999999
Q ss_pred CCCCCC------CCCccccCCCccchHHHHHHHHHHcCC----HHHHHHHH------HHHHHHhcC---CCCCccccCCC
Q 006488 514 GSDPKN------TPWSYHNGGSWPTLLWQLTVACIKMNR----VEIAEKAV------KLAERHISG---DKWPEYYDTKR 574 (643)
Q Consensus 514 ~gd~~~------~P~sYHNG~VWP~l~~~~a~Al~k~G~----~~~A~~ll------~~~~~~l~~---~~~pE~FDG~~ 574 (643)
..+..+ .-+-||||+-|-|+.|.|..|.+..++ ...+..+. .....++.. .++||+=. .+
T Consensus 1413 dN~~Ds~d~~takG~NYHQGPEWlw~~GyfLrArl~f~~k~gp~~~~y~i~qv~~rL~~h~k~l~~S~WrgLpELTN-~n 1491 (1521)
T KOG3625|consen 1413 DNALDSDDYNTAKGFNYHQGPEWLWPIGYFLRARLYFSRKMGPETTAYTIVQVKNRLSRHYKHLERSPWRGLPELTN-EN 1491 (1521)
T ss_pred CCCccccchhhhccccccCCCceeehhHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhccccCchhhcc-CC
Confidence 764444 345799999999999999999776433 23333332 222334433 34699865 35
Q ss_pred CCCCCCCCCccchHHHHHHHHHHHHh
Q 006488 575 GRFIGKQSRLYQTWSIAGYLVAKLLL 600 (643)
Q Consensus 575 g~p~G~~Ac~~QAWSaA~~L~a~~lL 600 (643)
|+.++ .+|..||||+|.+|-+..-|
T Consensus 1492 geyC~-dSc~tQAWSvacile~~ydL 1516 (1521)
T KOG3625|consen 1492 GEYCP-DSCETQAWSVACILETLYDL 1516 (1521)
T ss_pred cCccc-ccchHhHHHHHHHHHHHHHH
Confidence 66665 35889999999988776544
No 11
>TIGR01577 oligosac_amyl oligosaccharide amylase. The name of this type of amylase is based on the characterization of an glucoamylase family enzyme from Thermoactinomyces vulgaris. The T. vulgaris enzyme was expressed in E. coli and, like other glucoamylases, it releases beta-D-glucose from starch. However, unlike previously characterized glucoamylases, this T. vulgaris amylase hydrolyzes maltooligosaccharides (maltotetraose, maltose) more efficiently than starch (PubMed: 11549021), indicating this enzyme belongs to a class of glucoamylase-type enzymes with oligosaccharide-metabolizing activity.
Probab=99.88 E-value=8.8e-21 Score=216.51 Aligned_cols=337 Identities=18% Similarity=0.174 Sum_probs=228.3
Q ss_pred hHHHHHHHHHHHhhccccCCc-ceeeeccCCCCcccc--CCCccccchhHHHHHHhhccCChHHHHHHHHHHHhhhhccc
Q 006488 157 SVEDEAWDLLRESIVYYCGNP-VGTIAANDPNDSTIL--NYDQVFIRDFIPSGIAFLLKGEYDIVRNFILHTLQLQSWEK 233 (643)
Q Consensus 157 ~~~~~A~~~Lr~~~v~~~~~p-~G~~Aa~d~~~a~~~--~Y~~vfGRDt~Isalg~L~~G~peiaR~~L~~~l~LQ~~e~ 233 (643)
.++++++-.|+.++ ..+ -+++|+.+.+..... .|.-+|.||+..++.+++..|.++.++.++..++..|.
T Consensus 256 ~~~~~Sll~Lk~~~----~~~~GaiiAs~s~~~~~~~~~~Y~y~W~RD~~~~a~Al~~~G~~~~a~~~l~~l~~~q~--- 328 (616)
T TIGR01577 256 SLYRRSLAVLRLLT----DGEYGSMIAAPEFDEDFVRCGGYAYCWGRDASYIATALDRAGYHDRVDRFFRWAMQTQS--- 328 (616)
T ss_pred HHHHHHHHHHHhcc----CCCCCcEEEcCCCCcccccCCCCceeccccHHHHHHHHHHCCCHHHHHHHHHHHHHhhC---
Confidence 56777777776642 223 356666443211111 38999999999999999999999999999998887665
Q ss_pred cccCCCCCCCCCCCccccccccCCCCCCCcccccCCCCCCCCCCccCCCChHHHHHHHHHHHHHHhCCHhHHHhhhcHHH
Q 006488 234 TMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLSVQERVDVQTG 313 (643)
Q Consensus 234 ~ld~~q~~~GliP~~fKi~~~~~r~~~~~~~~~l~pd~Ge~a~~~ygsVDAtLWwIial~~Y~~~TGD~afl~~l~~~p~ 313 (643)
.+|..|..+.+ .+...| ...-...|.+-..|+++++|++.|||.+|++++ ++.
T Consensus 329 -------~~G~~~~~~~~------------dG~~~~------~~~~~Q~D~~g~~l~al~~y~~~t~d~~~~~~~--~~~ 381 (616)
T TIGR01577 329 -------RDGSWQQRYYL------------NGRLAP------LQWGLQIDETGSILWAMDQHYRLTNDRAFLEEI--WES 381 (616)
T ss_pred -------cCCCcceEEec------------CCCCCC------CCCCccccchhHHHHHHHHHHHHHCCHHHHHHH--HHH
Confidence 45655554311 011111 001134566666777999999999999999987 999
Q ss_pred HHHHHHHHHhCCCCCCCceeecCCCcccccccCCCCCchhhHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHH
Q 006488 314 IKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALLSAREMLTPEDGSADLIRALNNRLVALSFHI 393 (643)
Q Consensus 314 i~~iL~w~l~~gf~~~~~lLv~dG~~w~D~r~~r~G~pVEIQALwY~AL~~aaeLa~~~~g~~~~a~~l~~ra~~Lk~~~ 393 (643)
++.|++|+.... + +.+-.++-.-|-. |.|..+++++++|.||+++++|++.+ ++.+.++++.+.++.++..|
T Consensus 382 v~~a~~fl~~~~-~--~~l~~~~~~lWEe----r~G~~~~t~a~~~aAL~~aa~lA~~l-Gd~~~a~~~~~~Ad~ik~~i 453 (616)
T TIGR01577 382 VQKAAQYLILFI-D--PETPLPCRDLWEE----REGVFTYTASAVYGGLDAAAAVADKL-GEKRLAQNWKKAAEFIKRAV 453 (616)
T ss_pred HHHHHHHHHHhc-c--CCCCCCCCcccee----cCCccCccHHHHHHHHHHHHHHHHHc-CChHHHHHHHHHHHHHHHHH
Confidence 999999998632 1 1233344335664 46789999999999999999999985 55567889999999999999
Q ss_pred HHHhhhchhhhhhhhhccccchhhhhhcccCCCCCCCCccccccccCCCceeeecccCCccCcccccccchhh--HhcCC
Q 006488 394 REYYWIDMKKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEFMPHIGGYLIGNLQPAHMDFRFFSLGNLWS--VVSSL 471 (643)
Q Consensus 394 ~~~FW~d~~~l~~iyr~~~e~y~~~a~~~~n~~pdsip~~l~~f~~~~ggYL~~~v~p~~~d~r~~slGN~LA--L~sgl 471 (643)
+++||.++.+.+ +..+++...+...|+ .+|+ +.+|+
T Consensus 454 ~~~~w~~~~g~F----------------------------------------~~~~~~~~~~~~vDa--SlL~l~~~~g~ 491 (616)
T TIGR01577 454 EERFWLPERQVF----------------------------------------AKGIKLMVLDKTIDI--SILGISVPFNL 491 (616)
T ss_pred HHhccCCCCCEE----------------------------------------EEeecCCCCCCcccH--HHHhHHHhcCC
Confidence 999998654332 221221111111222 2443 45898
Q ss_pred CCHHHHHHH--HHHHHHhHHHhhccCCCcccCCCcCCCCceeecCCCCCCCCCccccCCCccchHHHHHHHHHHcCCHH-
Q 006488 472 ATVDQSHAI--LDLIEAKWAELVADMPLKICYPALEGQEWRIITGSDPKNTPWSYHNGGSWPTLLWQLTVACIKMNRVE- 548 (643)
Q Consensus 472 ld~eqa~~V--v~~l~~~w~~L~tp~gLR~l~P~~~~~~wr~~~~gd~~~~P~sYHNG~VWP~l~~~~a~Al~k~G~~~- 548 (643)
++++..+.+ ++.|++ +|.+|. +.+|. +|+.-.|+.|..|.--.-.++.++++.|+.+
T Consensus 492 l~~~Dpr~v~Tv~~I~~---~L~~~~----------~ggi~-------RY~~D~y~~g~~w~i~T~wla~~~~~~g~~~~ 551 (616)
T TIGR01577 492 IAPDDERMVKMAEAIEK---HLTSPI----------VGGIK-------RYENDPYVGGNPWILTTLWLSQLYIKQGRILK 551 (616)
T ss_pred CCCCChHHHHHHHHHHH---HhcccC----------CCeee-------CCCCCCCCCCCcHHHHHHHHHHHHHHhccccc
Confidence 877665544 666664 664321 11121 2222257778777666777788888888765
Q ss_pred ------------HHHHHHHHHHHHhcCCC-CCccccCCCCCCCCCCCCccchHHHHHHHHHHHHh
Q 006488 549 ------------IAEKAVKLAERHISGDK-WPEYYDTKRGRFIGKQSRLYQTWSIAGYLVAKLLL 600 (643)
Q Consensus 549 ------------~A~~ll~~~~~~l~~~~-~pE~FDG~~g~p~G~~Ac~~QAWSaA~~L~a~~lL 600 (643)
.|.++++-+..+-...| +||=+|+.+|+|.|-- ||+||-|+++.+...|
T Consensus 552 ~~~~~~~~~~~~~A~~ll~~~~~~~~~~Gll~Eqvd~~~g~~~g~~---Pl~wSHa~~i~a~~~l 613 (616)
T TIGR01577 552 ALNHNGADIYLQKSKKLLKWVMDHRTDLGLLPEQVDKETGKPAWAV---PLGWSHAMFLLTVLDL 613 (616)
T ss_pred ccccchhhhHHHHHHHHHHHHHhcCCCCCCCccccCCCCCCCCCcC---CcccchHHHHHHHHHH
Confidence 67777776666544445 7999999999999855 9999999998876544
No 12
>PRK13271 treA trehalase; Provisional
Probab=99.85 E-value=2.2e-19 Score=201.97 Aligned_cols=311 Identities=14% Similarity=0.164 Sum_probs=226.4
Q ss_pred cCCCccccchhHHHHHHhhccCChHHHHHHHHHHHhhhhccccccCCCCCCCCCCCccccccccCCCCCCCcccccCCCC
Q 006488 192 LNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILHTLQLQSWEKTMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDF 271 (643)
Q Consensus 192 ~~Y~~vfGRDt~Isalg~L~~G~peiaR~~L~~~l~LQ~~e~~ld~~q~~~GliP~~fKi~~~~~r~~~~~~~~~l~pd~ 271 (643)
-.|.+.+.=|+--.++|+|.+|..++||+.+..|+.+-. .-|.|||-.++-
T Consensus 155 GRFrE~YYWDSY~i~~GLl~s~~~~~a~~mi~Nf~~~i~----------~yG~IPNg~R~Y------------------- 205 (569)
T PRK13271 155 GRFREVYYWDSYFTMLGLAESGHWDKVADMVANFAHEID----------TWGHIPNGNRSY------------------- 205 (569)
T ss_pred CCcchhhhhHHHHHHHhhHhcCCHHHHHHHHHHHHHHHH----------HhCcCcCCchhh-------------------
Confidence 369999999999999999999999999999998874322 559999854332
Q ss_pred CCCCCCccCCCChHHHHHHHHHHHHHHhCCHhHHHhhhcHHHHHHHHHHHHhC------------------CCC--CC--
Q 006488 272 GEAAIGRVAPVDSGLWWIILLRAYGKCSGDLSVQERVDVQTGIKMILKLCLAD------------------GFD--MF-- 329 (643)
Q Consensus 272 Ge~a~~~ygsVDAtLWwIial~~Y~~~TGD~afl~~l~~~p~i~~iL~w~l~~------------------gf~--~~-- 329 (643)
|-+=-..+.|..++..|++.|+| +++++. .|.+++=.++-... ++. .|
T Consensus 206 -------Yl~RSQPP~l~~Mv~~~~~~~~~-~~l~~~--lp~l~kEy~~Wm~~~~~~~~~~~~~r~v~~~~~~~L~rY~~ 275 (569)
T PRK13271 206 -------YLSRSQPPFFALMVELLAQHEGD-AALKQY--LPQMQKEYAYWMEGVENLQPGQQEKRVVKLQDGTLLNRYWD 275 (569)
T ss_pred -------cccCCCChhHHHHHHHHHhcCcH-HHHHHH--HHHHHHHHHHHhCCCcccCccccccceEEeCCCCccccccc
Confidence 22233467799999999999998 577776 77777777655532 100 00
Q ss_pred ------C-----cee----ec---------------C-CC----ccccccc------CCCCCchhhHHHHHHHHHHHHhh
Q 006488 330 ------P-----TLL----VT---------------D-GS----CMIDRRM------GIHGHPLEIQALFYSALLSAREM 368 (643)
Q Consensus 330 ------~-----~lL----v~---------------d-G~----~w~D~r~------~r~G~pVEIQALwY~AL~~aaeL 368 (643)
| ... .+ + |. -|+.... -..=.||++|||+|++.+.++++
T Consensus 276 ~~~~PRpEsy~eD~~~a~~~~~~~~~~~y~~l~a~aESGwDfSsRw~~~~~~l~~i~t~~IiPVDLNALLy~ae~~LA~l 355 (569)
T PRK13271 276 DRDTPRPESWVEDIATAKSNPNRPATEIYRDLRSAAASGWDFSSRWMDNPQQLNTIRTTSIVPVDLNALMFKMEKILARA 355 (569)
T ss_pred CCCCCCCCcHHHHHHHHhhCCcchHHHHHHHHHHHhhcCCcchhhhccCCccccccccccccCchHHHHHHHHHHHHHHH
Confidence 0 000 00 0 11 2432111 12237899999999999999999
Q ss_pred cCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhhhccccchhhhhhcccCCCCCCCCccccccccCCCceeeec
Q 006488 369 LTPEDGSADLIRALNNRLVALSFHIREYYWIDMKKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEFMPHIGGYLIGN 448 (643)
Q Consensus 369 a~~~~g~~~~a~~l~~ra~~Lk~~~~~~FW~d~~~l~~iyr~~~e~y~~~a~~~~n~~pdsip~~l~~f~~~~ggYL~~~ 448 (643)
++.+ |+.+.+..++++|++++..|++.||+++.+.+-.|...
T Consensus 356 a~~l-Gd~~~A~~y~~~A~~rr~AI~~~LWnee~G~f~DYDl~------------------------------------- 397 (569)
T PRK13271 356 SKAA-GDNAMANQYETLANARQKAIEKYLWNDKEGWYADYDLK------------------------------------- 397 (569)
T ss_pred HHHh-CChhhHHHHHHHHHHHHHHHHHhcccCCCCEEEEEECC-------------------------------------
Confidence 9975 55667888999999999999999998776654333110
Q ss_pred ccCCccCcccccccchhhHhcCCCCHHHHHHHHHHHHHhHHHhhccCCCcccCCCcCCCCceeecCCCCCCCCCccccCC
Q 006488 449 LQPAHMDFRFFSLGNLWSVVSSLATVDQSHAILDLIEAKWAELVADMPLKICYPALEGQEWRIITGSDPKNTPWSYHNGG 528 (643)
Q Consensus 449 v~p~~~d~r~~slGN~LAL~sglld~eqa~~Vv~~l~~~w~~L~tp~gLR~l~P~~~~~~wr~~~~gd~~~~P~sYHNG~ 528 (643)
+..+. ..++..|+++|++|+++++|+++|++.+.. +|++|.||++..| ++..||+|+
T Consensus 398 -~~~~r--~~~saa~f~PLwag~a~~~qA~~Vv~~l~~---~Ll~pgGLpTt~~-----------------~SgqQWD~P 454 (569)
T PRK13271 398 -SHKVR--NQLTAAALFPLYVNAAAKDRANKVAAATKT---HLLQPGGLNTTSV-----------------KSGQQWDAP 454 (569)
T ss_pred -CCCEe--echhHHHHHhhhcCCCCHHHHHHHHHHHHH---hcCCCCCccCCCC-----------------CCCCCCcCc
Confidence 00001 134667889999999999999999999875 7888999998555 234799999
Q ss_pred C-ccchHHHHHHHHHHcCCHHHHHHHHHHHHHH----h-cCCCCCccccCC-CCCCCCCC---CCccchHHHHHHHHHHH
Q 006488 529 S-WPTLLWQLTVACIKMNRVEIAEKAVKLAERH----I-SGDKWPEYYDTK-RGRFIGKQ---SRLYQTWSIAGYLVAKL 598 (643)
Q Consensus 529 V-WP~l~~~~a~Al~k~G~~~~A~~ll~~~~~~----l-~~~~~pE~FDG~-~g~p~G~~---Ac~~QAWSaA~~L~a~~ 598 (643)
+ ||-++|+++.||.++|..+.|+++.....+. . ..+.+.|.||.. +|.+.|+. ....|.||.|.+|-+..
T Consensus 455 ngWaPlq~iiieGL~~yG~~~lA~~la~rwl~~~~~~~~~~g~m~EKYd~~~~G~~gGGGeY~~q~GFGWTNgV~L~lL~ 534 (569)
T PRK13271 455 NGWAPLQWVATEGLQNYGQKEVAMDVTWRFLTNVQHTYDREKKLVEKYDVSSTGTGGGGGEYPLQDGFGWTNGVTLKMLD 534 (569)
T ss_pred ccCHhHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhcccCceEEeeCCCCCCCCCCCCCCCCCCCcCcHHHHHHHHHH
Confidence 9 9999999999999999999999887544332 2 456689999983 56655433 55689999999888877
Q ss_pred HhcC
Q 006488 599 LLDN 602 (643)
Q Consensus 599 lL~~ 602 (643)
.+..
T Consensus 535 ~~~~ 538 (569)
T PRK13271 535 LICP 538 (569)
T ss_pred hcCc
Confidence 6543
No 13
>PLN02567 alpha,alpha-trehalase
Probab=99.83 E-value=1.3e-18 Score=196.04 Aligned_cols=332 Identities=12% Similarity=0.094 Sum_probs=233.4
Q ss_pred cCCCccccchhHHHHHHhhccCChHHHHHHHHHHHhhhhccccccCCCCCCCCCCCccccccccCCCCCCCcccccCCCC
Q 006488 192 LNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILHTLQLQSWEKTMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDF 271 (643)
Q Consensus 192 ~~Y~~vfGRDt~Isalg~L~~G~peiaR~~L~~~l~LQ~~e~~ld~~q~~~GliP~~fKi~~~~~r~~~~~~~~~l~pd~ 271 (643)
-.|.++|.=|+.-.++|+|..|..++||+.+..|+.++. ..|+|||-.+
T Consensus 148 gRFrE~yyWDSy~i~~GLl~s~~~~~A~~mi~Nf~~~i~----------~~GfIPNg~R--------------------- 196 (554)
T PLN02567 148 SRFREVYYWDSYWVIRGLLASKMYETAKGVVENLLYLVD----------TYGFVPNGAR--------------------- 196 (554)
T ss_pred CCcCccchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHH----------HcCcCCCCCc---------------------
Confidence 369999999999999999999999999999999997765 6699998331
Q ss_pred CCCCCCccCCCChHHHHHHHHHHHHHHhCCHhHHHhhhcHHHHHHHHHHHHhCC-C-------CCCCcee---------e
Q 006488 272 GEAAIGRVAPVDSGLWWIILLRAYGKCSGDLSVQERVDVQTGIKMILKLCLADG-F-------DMFPTLL---------V 334 (643)
Q Consensus 272 Ge~a~~~ygsVDAtLWwIial~~Y~~~TGD~afl~~l~~~p~i~~iL~w~l~~g-f-------~~~~~lL---------v 334 (643)
.||-..-..|.+..++..|++.|+|.+|+++. .|.+++=.+|-...+ . ++...+. .
T Consensus 197 -----~Yyl~RSQPPlla~mV~~~~~~t~d~~~l~~~--lp~L~~E~~~W~~~~~~v~i~~~~g~~~~L~rY~~~~~~Pr 269 (554)
T PLN02567 197 -----AYYTNRSQPPLLSAMVLAVYAATKDVELVRRA--LPALLKEHAFWTSGRHTVTIRDANGVVHVLSRYYAMWDKPR 269 (554)
T ss_pred -----ccccCCCCcHHHHHHHHHHHHhcCcHHHHHHH--HHHHHHHHHHHhcCCcceeeecCCCCcCCCcccccCCCCCC
Confidence 25566677899999999999999999999987 888887777666431 0 0000000 0
Q ss_pred c-----C--------------------------CC----cccccc--c----CCCCCchhhHHHHHHHHHHHHhhcCCCC
Q 006488 335 T-----D--------------------------GS----CMIDRR--M----GIHGHPLEIQALFYSALLSAREMLTPED 373 (643)
Q Consensus 335 ~-----d--------------------------G~----~w~D~r--~----~r~G~pVEIQALwY~AL~~aaeLa~~~~ 373 (643)
+ | |- -|+... + ...=.||..|++.|.+-+.+++|++.+
T Consensus 270 pEsyreD~~~a~~~~~~~~~~~~y~~l~a~aESGwDfSsRw~~~~~~l~ti~t~~i~pVDLNa~L~~~e~~LA~la~~l- 348 (554)
T PLN02567 270 PESSRIDKEVASKFSSSSEKQQLYRDIASAAESGWDFSSRWMRDGSNLTTLRTTSILPVDLNAFLLKMELDIAFFAKLL- 348 (554)
T ss_pred CccccccHHHHhcCCCchHHHHHHHHHHHHHHcCCCchhhhccccccccccccccccCccHHHHHHHHHHHHHHHHHHh-
Confidence 0 0 11 122100 0 001157999999999999999999975
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhhhccccchhhhhhcccCCCCCCCCccccccccCCCceeeecccCCc
Q 006488 374 GSADLIRALNNRLVALSFHIREYYWIDMKKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEFMPHIGGYLIGNLQPAH 453 (643)
Q Consensus 374 g~~~~a~~l~~ra~~Lk~~~~~~FW~d~~~l~~iyr~~~e~y~~~a~~~~n~~pdsip~~l~~f~~~~ggYL~~~v~p~~ 453 (643)
|+.+.++.+.++|+.++..|++.+|+++.+.+-.|...++.-. .+. .|- +.+..
T Consensus 349 G~~~~a~~~~~~A~~~~~aI~~~lWdee~G~y~Dydl~~~~~~----------~~~-------------~~~---~~~~~ 402 (554)
T PLN02567 349 GDKATAERFLKAAKARKRAINAVLWNEEMGQWLDYWLPPNGAT----------CQE-------------SYT---WDAEN 402 (554)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHhcCcccCeEEeecccccccc----------ccc-------------ccc---ccccc
Confidence 5566788899999999999999999999888766643322000 000 000 01111
Q ss_pred cCcccccccchhhHhcCCCCHH--HHHHHHHHHHHhHHHhhccCCCcccCCCcCCCCceeecCCCCCCCCCccccCC-Cc
Q 006488 454 MDFRFFSLGNLWSVVSSLATVD--QSHAILDLIEAKWAELVADMPLKICYPALEGQEWRIITGSDPKNTPWSYHNGG-SW 530 (643)
Q Consensus 454 ~d~r~~slGN~LAL~sglld~e--qa~~Vv~~l~~~w~~L~tp~gLR~l~P~~~~~~wr~~~~gd~~~~P~sYHNG~-VW 530 (643)
.. +.++.+|+++|++|+++++ ++.+|++.+.. ..+..|.||.+ + ..++..||+|+ +|
T Consensus 403 ~~-~~~~~s~f~PLw~g~~~~~~~~a~~v~~~l~~--~~l~~pgGipt---s--------------l~~sg~qWdgPn~W 462 (554)
T PLN02567 403 QN-TNVYASNFVPLWCGVVPPGDAKVEKVVESLKS--SGLVLPAGIAT---S--------------LRNTGQQWDFPNAW 462 (554)
T ss_pred cc-cCccHHHHHHHHcCCCChhhHHHHHHHHHHHh--ccCccCCcccC---C--------------CCCccccCCCCCcC
Confidence 11 2345678999999999985 57888888864 25666777753 0 13455799999 99
Q ss_pred cchHHHHHHHHHHcCCHH---HHHHHHHH-----HHHHhcCCCCCccccCCCCCCCCC----CCCccchHHHHHHHHHHH
Q 006488 531 PTLLWQLTVACIKMNRVE---IAEKAVKL-----AERHISGDKWPEYYDTKRGRFIGK----QSRLYQTWSIAGYLVAKL 598 (643)
Q Consensus 531 P~l~~~~a~Al~k~G~~~---~A~~ll~~-----~~~~l~~~~~pE~FDG~~g~p~G~----~Ac~~QAWSaA~~L~a~~ 598 (643)
|-++|+++.||.++|..+ .|+++... .......+.+.|+||..++...|. .....|.||+|.+|.+..
T Consensus 463 ~pl~~l~i~GL~~yG~~ea~~lA~~la~rwl~~~~~~~~~tg~m~EkYd~~~~~~~GgGGey~~q~GFGWTngV~L~ll~ 542 (554)
T PLN02567 463 APLQHMIVEGLAASGSKEGKALAEDIARRWLRSNYVAYKKTGAMHEKYDARYCGEVGGGGEYIPQTGFGWSNGVVLSLLE 542 (554)
T ss_pred HhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHhcCceEEeECCCCccccCCCCCCCCCCCcChHHHHHHHHHH
Confidence 999999999999999875 66665432 122335677999999887443332 133567899999998888
Q ss_pred HhcCCCCccc
Q 006488 599 LLDNPAAAKV 608 (643)
Q Consensus 599 lL~~P~~~~~ 608 (643)
....|.+..+
T Consensus 543 ~yg~~~~~~~ 552 (554)
T PLN02567 543 EFGWPEDKKL 552 (554)
T ss_pred HhCCcccCCC
Confidence 7777766543
No 14
>PRK13272 treA trehalase; Provisional
Probab=99.80 E-value=2.1e-17 Score=184.90 Aligned_cols=310 Identities=14% Similarity=0.160 Sum_probs=220.9
Q ss_pred cCCCccccchhHHHHHHhhccCChHHHHHHHHHHHhhhhccccccCCCCCCCCCCCccccccccCCCCCCCcccccCCCC
Q 006488 192 LNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILHTLQLQSWEKTMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDF 271 (643)
Q Consensus 192 ~~Y~~vfGRDt~Isalg~L~~G~peiaR~~L~~~l~LQ~~e~~ld~~q~~~GliP~~fKi~~~~~r~~~~~~~~~l~pd~ 271 (643)
-.|.+.+.=|+--.++|+|.+|..++||+.+..|+-+- + .-|.|||-.++
T Consensus 156 GRFrE~YYWDSY~i~~GLl~s~~~~~a~~mi~Nf~~~i------~----~yGfIPNG~R~-------------------- 205 (542)
T PRK13272 156 GRFREVYYWDSYFTMLGLVKSGQTTLSRQMLDNFAYLI------D----TYGHIPNGNRT-------------------- 205 (542)
T ss_pred CCccchhhhHHHHHHHhhhhcCcHHHHHHHHHHHHHHH------H----HcCcCcCCchh--------------------
Confidence 36999999999999999999999999999999887432 2 55999985432
Q ss_pred CCCCCCccCCCChHHHHHHHHHHHHHHhCCHhHHHhhhcHHHHHHHHHHHHhCC-----------CCC--CCcee-----
Q 006488 272 GEAAIGRVAPVDSGLWWIILLRAYGKCSGDLSVQERVDVQTGIKMILKLCLADG-----------FDM--FPTLL----- 333 (643)
Q Consensus 272 Ge~a~~~ygsVDAtLWwIial~~Y~~~TGD~afl~~l~~~p~i~~iL~w~l~~g-----------f~~--~~~lL----- 333 (643)
||-+=-..|.|..++..|++.|||..+ ++. .|.+++=.++-...+ +.. ....+
T Consensus 206 ------YYl~RSQPP~l~~Mv~~~~~~t~d~~~-~~~--lp~l~kEy~~Wm~~~~~~~~~~~~~~~v~~~~g~~L~rY~~ 276 (542)
T PRK13272 206 ------YYLSRSQPPFFSYMVELQAGVEGDAAY-QRY--LPQLQKEYAYWMQGSDDLQPGQAARHVVRLADGSLLNRYWD 276 (542)
T ss_pred ------ccccCCCchhHHHHHHHHHHhcChHHH-HHH--HHHHHHHHHHHcCCCCCCCCccccceeEecCCCcchhhhcC
Confidence 233333467799999999999999987 444 777777666555321 000 00000
Q ss_pred ----------ecC-------------------------CC----cccc-cc-c----CCCCCchhhHHHHHHHHHHHHhh
Q 006488 334 ----------VTD-------------------------GS----CMID-RR-M----GIHGHPLEIQALFYSALLSAREM 368 (643)
Q Consensus 334 ----------v~d-------------------------G~----~w~D-~r-~----~r~G~pVEIQALwY~AL~~aaeL 368 (643)
..| |. -|+. .. + ...=.||..|++.|.+-+..+++
T Consensus 277 ~~~~PRpEsy~eD~~~a~~~~~~~~~~~Y~~l~a~aESGWDfSsRw~~~~~~L~~i~t~~IvpVDLNalL~~~e~~LA~~ 356 (542)
T PRK13272 277 ERDTPRPEAWLHDTRTAAEAKDRPAAEVYRDLRAGAESGWDYSSRWLADGKTLASIRTTAIVPVDLNSLLYHLERTLAQA 356 (542)
T ss_pred CCCCCCChHHHHHHHHhcCcccCcHHHHHHHHHHHHhcCCCchhhhccccccccccCcccccCccHHHHHHHHHHHHHHH
Confidence 000 10 1221 00 0 11124899999999999999999
Q ss_pred cCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhhhccccchhhhhhcccCCCCCCCCccccccccCCCceeeec
Q 006488 369 LTPEDGSADLIRALNNRLVALSFHIREYYWIDMKKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEFMPHIGGYLIGN 448 (643)
Q Consensus 369 a~~~~g~~~~a~~l~~ra~~Lk~~~~~~FW~d~~~l~~iyr~~~e~y~~~a~~~~n~~pdsip~~l~~f~~~~ggYL~~~ 448 (643)
++.+ |+.+.++.++++|+.+++.|++.+|++ .+.+-.|+..++
T Consensus 357 ~~~l-G~~~~a~~~~~~A~~r~~aI~~~lWde-~G~~~DYD~~~~----------------------------------- 399 (542)
T PRK13272 357 CASS-GLAACSQDYAALAQQRKQAIDAHLWNP-AGYYADYDWQTR----------------------------------- 399 (542)
T ss_pred HHHh-CChHHHHHHHHHHHHHHHHHHHhccCc-CceEEeeccCCC-----------------------------------
Confidence 9875 556678889999999999999999986 665544422111
Q ss_pred ccCCccCcccccccchhhHhcCCCCHHHHHHHHHHHHHhHHHhhccCCCcccCCCcCCCCceeecCCCCCCCCCccccCC
Q 006488 449 LQPAHMDFRFFSLGNLWSVVSSLATVDQSHAILDLIEAKWAELVADMPLKICYPALEGQEWRIITGSDPKNTPWSYHNGG 528 (643)
Q Consensus 449 v~p~~~d~r~~slGN~LAL~sglld~eqa~~Vv~~l~~~w~~L~tp~gLR~l~P~~~~~~wr~~~~gd~~~~P~sYHNG~ 528 (643)
.+. ..++.+|+++|++|+++++|++++++.+.. .++.+.||-+..| ++..||+|+
T Consensus 400 ---~~~--~~~s~a~f~PLwag~a~~~~a~~l~~~l~~---~~l~~gGlpTt~~-----------------~sgqQWD~P 454 (542)
T PRK13272 400 ---TLS--EQVTAAALYPLFAGLASDDRAKRTADSVRA---QLLRPGGLATTAL-----------------KTGQQWDEP 454 (542)
T ss_pred ---Ccc--ccccHHHHHHHHcCCCCHHHHHHHHHHHHH---hccCCCCcCCCCC-----------------CccccCCCC
Confidence 011 134678999999999999999999998875 5666777765333 345799999
Q ss_pred -CccchHHHHHHHHHHcCCHHHHHHHHHHHHHHhc-----CCCCCccccCCCCCCCC-----CCCCccchHHHHHHHHHH
Q 006488 529 -SWPTLLWQLTVACIKMNRVEIAEKAVKLAERHIS-----GDKWPEYYDTKRGRFIG-----KQSRLYQTWSIAGYLVAK 597 (643)
Q Consensus 529 -VWP~l~~~~a~Al~k~G~~~~A~~ll~~~~~~l~-----~~~~pE~FDG~~g~p~G-----~~Ac~~QAWSaA~~L~a~ 597 (643)
+||-++|+++.||.++|..+.|+++.....+... .+++.|+||-. +.+.| +.....|+||.|.+|-+.
T Consensus 455 N~WaPlq~i~i~GL~~yG~~~lA~~La~rwl~~~~~~~~~~g~m~EKYdv~-~~g~~GgGGEY~~Q~GFGWTNgV~L~lL 533 (542)
T PRK13272 455 NGWAPLQWVAVDGLRRYGEDALARTIGERFLAQVQALFAREHKLVEKYGLD-GNAAGGGGGEYALQDGFGWTNGVTLMLL 533 (542)
T ss_pred CccHhHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhhcCceeEEeecC-CCCCCCCCCCcCCCCCCCCHHHHHHHHH
Confidence 9999999999999999999999988765544332 56799999943 22211 124468999999998887
Q ss_pred HHhcCC
Q 006488 598 LLLDNP 603 (643)
Q Consensus 598 ~lL~~P 603 (643)
.....+
T Consensus 534 ~~yg~~ 539 (542)
T PRK13272 534 NLYPPG 539 (542)
T ss_pred HHhccc
Confidence 766554
No 15
>PRK13270 treF trehalase; Provisional
Probab=99.77 E-value=1.7e-16 Score=178.15 Aligned_cols=310 Identities=12% Similarity=0.171 Sum_probs=219.6
Q ss_pred cCCCccccchhHHHHHHhhccCChHHHHHHHHHHHhhhhccccccCCCCCCCCCCCccccccccCCCCCCCcccccCCCC
Q 006488 192 LNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILHTLQLQSWEKTMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDF 271 (643)
Q Consensus 192 ~~Y~~vfGRDt~Isalg~L~~G~peiaR~~L~~~l~LQ~~e~~ld~~q~~~GliP~~fKi~~~~~r~~~~~~~~~l~pd~ 271 (643)
-.|.+.+.=|+--.++|+|.+|..++||+.+..|+-+-. .-|.|||-.++
T Consensus 167 GRFrE~YYWDSYwi~~GLl~sg~~~~a~~mi~Nf~~li~----------~yGfIPNG~R~-------------------- 216 (549)
T PRK13270 167 GRFSETYYWDSYFTMLGLAESGREDLLKCMADNFAWMIE----------NYGHIPNGNRT-------------------- 216 (549)
T ss_pred CCcccchhhhHHHHHHHhhhcCcHHHHHHHHHHHHHHHH----------HcCcCcCCchh--------------------
Confidence 479999999999999999999999999999998874322 55999985432
Q ss_pred CCCCCCccCCCChHHHHHHHHHHHHHHhCCHhHHHhhhcHHHHHHHHHHHHhCCC-----------CCCC--cee-----
Q 006488 272 GEAAIGRVAPVDSGLWWIILLRAYGKCSGDLSVQERVDVQTGIKMILKLCLADGF-----------DMFP--TLL----- 333 (643)
Q Consensus 272 Ge~a~~~ygsVDAtLWwIial~~Y~~~TGD~afl~~l~~~p~i~~iL~w~l~~gf-----------~~~~--~lL----- 333 (643)
||-+=-..|.|..++..|.+ .|.+++++. .|.|++=.++-...+- ...+ .+|
T Consensus 217 ------YYl~RSQPP~l~~Mv~~y~~--~~~~~~~~~--lp~l~~E~~fWm~~~~~~~~~~~~~~~v~~~~g~~L~rY~~ 286 (549)
T PRK13270 217 ------YYLSRSQPPVFALMVELFEE--DGVRGARRY--LDHLKMEYAFWMDGAESLIPNQAYRHVVRMPDGSLLNRYWD 286 (549)
T ss_pred ------ccccCCCCHhHHHHHHHHHh--cCHHHHHHH--HHHHHHHHHHHcCCCCccCcccccceeEecCCCCccccccC
Confidence 22233345778889999887 567788776 7777776665553210 0000 000
Q ss_pred ---e--c----------------------------C-CC----cccccc--c----CCCCCchhhHHHHHHHHHHHHhhc
Q 006488 334 ---V--T----------------------------D-GS----CMIDRR--M----GIHGHPLEIQALFYSALLSAREML 369 (643)
Q Consensus 334 ---v--~----------------------------d-G~----~w~D~r--~----~r~G~pVEIQALwY~AL~~aaeLa 369 (643)
. + + |. -|+... + -..=.||..||+.|.+-+..++++
T Consensus 287 ~~~~PRpEsyreD~~~a~~~~rp~~~~Y~~lra~aESGWDfSsRW~~~~~~L~~i~T~~iipVDLNaiL~~~e~~LA~~a 366 (549)
T PRK13270 287 DRDTPRDESWLEDVETAKHSGRPPNEVYRDLRAGAASGWDYSSRWLRDTGRLASIRTTQFIPIDLNAFLYKLESAIANIS 366 (549)
T ss_pred CCCCCCCchhHHHHHhhcccCCchHHHHHHHHHHHHcCCCchhhcccCCcccccccccCcchhhHHHHHHHHHHHHHHHH
Confidence 0 0 0 10 122110 0 011158999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhhhccccchhhhhhcccCCCCCCCCccccccccCCCceeeecc
Q 006488 370 TPEDGSADLIRALNNRLVALSFHIREYYWIDMKKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEFMPHIGGYLIGNL 449 (643)
Q Consensus 370 ~~~~g~~~~a~~l~~ra~~Lk~~~~~~FW~d~~~l~~iyr~~~e~y~~~a~~~~n~~pdsip~~l~~f~~~~ggYL~~~v 449 (643)
+.+ |+.+.+..++++|+.+++.|++.+|+++.+.+-.|...
T Consensus 367 ~~l-G~~~~a~~~~~~A~~r~~AI~~~LWnee~G~~~DYD~~-------------------------------------- 407 (549)
T PRK13270 367 ALK-GEKETEALFRQKASARRDAVNRYLWDDENGIYRDYDWR-------------------------------------- 407 (549)
T ss_pred HHh-CChHHHHHHHHHHHHHHHHHHHhccCcccCeEEecccc--------------------------------------
Confidence 975 55677888999999999999999999877765444211
Q ss_pred cCCccCcccccccchhhHhcCCCCHHHHHHHHHHHHHhHHHhhccCCCcccCCCcCCCCceeecCCCCCCCCCccccCC-
Q 006488 450 QPAHMDFRFFSLGNLWSVVSSLATVDQSHAILDLIEAKWAELVADMPLKICYPALEGQEWRIITGSDPKNTPWSYHNGG- 528 (643)
Q Consensus 450 ~p~~~d~r~~slGN~LAL~sglld~eqa~~Vv~~l~~~w~~L~tp~gLR~l~P~~~~~~wr~~~~gd~~~~P~sYHNG~- 528 (643)
-+.. +.++.+|+++|++|+++++|++++++.+.. .++.+-|+-+ -.+++..||+|+
T Consensus 408 -~~~~--~~~s~a~f~PLwaG~a~~~qa~~l~~~l~~---~ll~pGGl~t-----------------S~~~sgqQWD~PN 464 (549)
T PRK13270 408 -REQL--ALFSAAAIVPLYVGMANHEQADRLANAVRS---RLLTPGGILA-----------------SEYETGEQWDKPN 464 (549)
T ss_pred -cCcc--ccccHHHHHHHHhCCCCHHHHHHHHHHHHH---hcccCCCcCC-----------------CCCCCcccCCCCC
Confidence 1111 234778999999999999999999999864 5555555442 024567899999
Q ss_pred CccchHHHHHHHHHHcCCHHHHHHHHHHHHHHh-----cCCCCCccccCCCCCCCCC-----CCCccchHHHHHHHHHHH
Q 006488 529 SWPTLLWQLTVACIKMNRVEIAEKAVKLAERHI-----SGDKWPEYYDTKRGRFIGK-----QSRLYQTWSIAGYLVAKL 598 (643)
Q Consensus 529 VWP~l~~~~a~Al~k~G~~~~A~~ll~~~~~~l-----~~~~~pE~FDG~~g~p~G~-----~Ac~~QAWSaA~~L~a~~ 598 (643)
+||-++|+++.||.++|..+.|+++.....+.. ..+++.|.||..++.+.|+ +....|.||.|.+|.+..
T Consensus 465 ~WaPlqwmiieGL~ryG~~~lA~~LA~rwl~~~~~~~~~~g~m~EKYdv~~~~g~~GgGGEY~~q~GFGWTNGV~l~~l~ 544 (549)
T PRK13270 465 GWAPLQWMAIQGFKMYGDDLLGDEIARSWLKTVNQFYQEHHKLIEKYHIAGGVPREGGGGEYPLQDGFGWTNGVVRRLIG 544 (549)
T ss_pred CCccHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhhcCeeEEEecCCCCCCCCCCCCCcCCCCCcCcHHHHHHHHHH
Confidence 899999999999999999999988876544433 2567999999865432221 134689999999988877
Q ss_pred HhcCC
Q 006488 599 LLDNP 603 (643)
Q Consensus 599 lL~~P 603 (643)
...+|
T Consensus 545 ~yg~~ 549 (549)
T PRK13270 545 LYGEP 549 (549)
T ss_pred HhCCC
Confidence 66544
No 16
>PF01204 Trehalase: Trehalase; InterPro: IPR001661 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 37 GH37 from CAZY comprises enzymes with only one known activity; trehalase (3.2.1.28 from EC). Trehalase is the enzyme responsible for the degradation of the disaccharide alpha,alpha-trehalose yielding two glucose subunits []. It is an enzyme found in a wide variety of organisms and whose sequence has been highly conserved throughout evolution.; GO: 0004555 alpha,alpha-trehalase activity, 0005991 trehalose metabolic process; PDB: 2JJB_B 2WYN_B 2JG0_A 2JF4_A 3C67_A 3D3I_B 3C69_A 3C68_A 2Z07_B.
Probab=99.74 E-value=1.2e-16 Score=179.16 Aligned_cols=315 Identities=17% Similarity=0.197 Sum_probs=207.1
Q ss_pred cCCCccccchhHHHHHHhhccCChHHHHHHHHHHHhhhhccccccCCCCCCCCCCCccccccccCCCCCCCcccccCCCC
Q 006488 192 LNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILHTLQLQSWEKTMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDF 271 (643)
Q Consensus 192 ~~Y~~vfGRDt~Isalg~L~~G~peiaR~~L~~~l~LQ~~e~~ld~~q~~~GliP~~fKi~~~~~r~~~~~~~~~l~pd~ 271 (643)
-.|.+.+.=|+--.++|+|.+|..+.||+.+..|+.+- + .-|.|||-.++
T Consensus 124 GRF~E~YyWDSYfi~~GLl~s~~~~~a~~mi~Nf~~~i------~----~yGfipNg~R~-------------------- 173 (512)
T PF01204_consen 124 GRFREMYYWDSYFIILGLLASGMYETAKGMIENFLYLI------D----RYGFIPNGNRT-------------------- 173 (512)
T ss_dssp TTB-S-BHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHH------H----HHSS--SBSBG--------------------
T ss_pred CCcccchhHhHHHHHHHHHHcCCHHHHHHHHHHHHHHH------H----HhCcCCCCccH--------------------
Confidence 37899999999999999999999999999999888432 2 45899985433
Q ss_pred CCCCCCccCCCChHHHHHHHHHHHHHHhCCHhHHHhhhcHHHHHHHHHHHHh-CCCCC-------C-----------C--
Q 006488 272 GEAAIGRVAPVDSGLWWIILLRAYGKCSGDLSVQERVDVQTGIKMILKLCLA-DGFDM-------F-----------P-- 330 (643)
Q Consensus 272 Ge~a~~~ygsVDAtLWwIial~~Y~~~TGD~afl~~l~~~p~i~~iL~w~l~-~gf~~-------~-----------~-- 330 (643)
||-+=-.+|.+..++.+|++.|+|.+++++. .|.|+.=++|-.. .+... + |
T Consensus 174 ------Yyl~RSQPPlla~mV~~~y~~t~d~~~l~~~--lp~L~ke~~fW~~~~r~~~~~~~~~~~~l~ry~~~~~~prp 245 (512)
T PF01204_consen 174 ------YYLNRSQPPLLAQMVREYYEATKDKAFLREA--LPALEKEYEFWMDNNRDVRVTGLGKGYGLNRYGDPWNSPRP 245 (512)
T ss_dssp ------GGTT---S--HHHHHHHHHHHHHTCHHHHHH--HHHHHHHHHHHCCCEEETTEEEECTSEECCHHHHCHHCT-C
T ss_pred ------HhccCCCCchHHHHHHHHHHhcCCHHHHHHH--HHHHHHHHHHHCCCCcceeecCCCccCCcccccCCCCCCcc
Confidence 3333444677999999999999999999987 8888777776652 11000 0 0
Q ss_pred cee---------ec-----------------CC----Ccccccc------c----CCCCCchhhHHHHHHHHHHHHhhcC
Q 006488 331 TLL---------VT-----------------DG----SCMIDRR------M----GIHGHPLEIQALFYSALLSAREMLT 370 (643)
Q Consensus 331 ~lL---------v~-----------------dG----~~w~D~r------~----~r~G~pVEIQALwY~AL~~aaeLa~ 370 (643)
.-. .+ +| +-|+... + ...-.||..||+.|.+.+..++|++
T Consensus 246 Esy~eD~~~a~~~~~~~~~~~~y~~i~saaESGwDfssRw~~~sg~d~~~l~~~~t~~iipVDLNa~L~~~e~~LA~~a~ 325 (512)
T PF01204_consen 246 ESYREDVETAENFPSERDKEELYRDIASAAESGWDFSSRWFRDSGFDNSNLFTIRTTDIIPVDLNAILYRNEKDLAEFAE 325 (512)
T ss_dssp CCCCHHHHHHHCHCHTSTCHHHHCHHHHHHHCCHHCTGGGBSSECCEE-TCHHCECCCEE-HHHHHHHHHHHHHHHHHHH
T ss_pred hHHHhhHHHHHhhcccchHHHHhhcccchhhhhhhccceeeecCCCchhhhhccceeeecCchHHHHHHHHHHHHHHHHH
Confidence 000 00 01 1233110 0 1222579999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhhhccccchhhhhhcccCCCCCCCCccccccccCCCceeeeccc
Q 006488 371 PEDGSADLIRALNNRLVALSFHIREYYWIDMKKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEFMPHIGGYLIGNLQ 450 (643)
Q Consensus 371 ~~~g~~~~a~~l~~ra~~Lk~~~~~~FW~d~~~l~~iyr~~~e~y~~~a~~~~n~~pdsip~~l~~f~~~~ggYL~~~v~ 450 (643)
.+ |+.+.++.++++|+.+++.|++.||+++.+.+-.|+..++
T Consensus 326 ~l-G~~~~a~~~~~~A~~~~~aI~~~lWdee~g~~~Dyd~~~~------------------------------------- 367 (512)
T PF01204_consen 326 LL-GDQEKAEEYRQRAEERKEAINQYLWDEEDGFYYDYDLRTG------------------------------------- 367 (512)
T ss_dssp HT-T-HHHHHHHHHHHHHHHHHHHHHTEETTTTEE--EETTTT-------------------------------------
T ss_pred Hc-CchhHHHHHHHHHHHHHHHHHHhCccCCCCeEEeeeCCCC-------------------------------------
Confidence 85 6677899999999999999999999988887654432211
Q ss_pred CCccCcccccccchhhHhcCCCCHHHHHHHHHHHHHhHHHhhccCCCcccCCCcCCCCceeecCCCCCCCCCccccCC-C
Q 006488 451 PAHMDFRFFSLGNLWSVVSSLATVDQSHAILDLIEAKWAELVADMPLKICYPALEGQEWRIITGSDPKNTPWSYHNGG-S 529 (643)
Q Consensus 451 p~~~d~r~~slGN~LAL~sglld~eqa~~Vv~~l~~~w~~L~tp~gLR~l~P~~~~~~wr~~~~gd~~~~P~sYHNG~-V 529 (643)
. ..+..+..|+++|++|+++++|+.++++.+.. .+.....+.. |. ++. ...+.+..||+|+ +
T Consensus 368 --~-~~~~~~~a~f~PL~ag~a~~~qa~~~~~~~l~---~~~~~~~l~~--~~-------g~~--ts~~~~~~qWD~Pn~ 430 (512)
T PF01204_consen 368 --K-RSPVFSPANFLPLWAGIASPEQAERLVARALD---YLERSGLLTF--PG-------GIP--TSLYDTGQQWDGPNV 430 (512)
T ss_dssp --E-EGG--BGGGGHHHHTT-S-HHHHHHHHHHHHH---HCTTCCSSC---CS-------ECT--TCTTTTTSTTSTTEE
T ss_pred --C-CcccccHHHHHHHHHhhcCHhhhhhHHHHHHH---HHHhcCCccc--CC-------CCC--CccccccccCCCCCc
Confidence 0 01144668899999999999999888887764 3332222221 10 011 3344588999999 7
Q ss_pred ccchHHHHHHHHHHcCCHHHHHHHHHHHHH----Hhc-CCCCCccccCCC-CCCC--C--CCCCccchHHHHHHHHHHHH
Q 006488 530 WPTLLWQLTVACIKMNRVEIAEKAVKLAER----HIS-GDKWPEYYDTKR-GRFI--G--KQSRLYQTWSIAGYLVAKLL 599 (643)
Q Consensus 530 WP~l~~~~a~Al~k~G~~~~A~~ll~~~~~----~l~-~~~~pE~FDG~~-g~p~--G--~~Ac~~QAWSaA~~L~a~~l 599 (643)
||-++|+++.||.++|+.++|.++.....+ .+. .+.+.|.||... +... | +.....+.||.|.+|.+...
T Consensus 431 WaPlq~~~i~GL~~yG~~~lA~~la~rwl~~~~~~~~~~g~m~EKYd~~~~~~~gg~gGeY~~q~GFGWTNgv~l~~l~~ 510 (512)
T PF01204_consen 431 WAPLQWMAIEGLRRYGYRELARRLAQRWLRLNYKVFKRTGKMFEKYDVEDGGEPGGGGGEYPVQDGFGWTNGVYLDLLDK 510 (512)
T ss_dssp EHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHHCCCCCSSEBSEEETTTTSCEC-S-SSS---BS-HHHHHHHHHHHHH
T ss_pred cHhHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhcCchhccccceeccccCCCCCcccCCCCCccHHHHHHHHHHh
Confidence 999999999999999999999988765433 222 345799999864 2222 2 22456899999998887654
No 17
>PF05592 Bac_rhamnosid: Bacterial alpha-L-rhamnosidase; InterPro: IPR008902 This entry consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria [].; PDB: 2OKX_B 3CIH_A.
Probab=99.63 E-value=9e-15 Score=163.02 Aligned_cols=295 Identities=19% Similarity=0.174 Sum_probs=181.3
Q ss_pred cCC--CccccchhHHHHHHhh-ccCChHHHHHHHHHHHhhhhccccccCCCCCCCCCCCccccccccCCCCCCCcccccC
Q 006488 192 LNY--DQVFIRDFIPSGIAFL-LKGEYDIVRNFILHTLQLQSWEKTMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLD 268 (643)
Q Consensus 192 ~~Y--~~vfGRDt~Isalg~L-~~G~peiaR~~L~~~l~LQ~~e~~ld~~q~~~GliP~~fKi~~~~~r~~~~~~~~~l~ 268 (643)
|.+ ...|+.|+.++++..+ ..++.+++|+.|..++..|. .+|.+|...
T Consensus 142 p~RdER~~w~GD~~~~~~~~~~~~~~~~l~~~~l~~~~~~q~----------~~G~~p~~~------------------- 192 (509)
T PF05592_consen 142 PKRDERLGWTGDARVSALTAYYSFGDAALYRKWLRDFADSQR----------PDGLLPSVA------------------- 192 (509)
T ss_dssp TTT-T---BHHHHHHHHHHHHCCT--HHHHHHHHHHHHGGTT----------TSTT-SSBS-------------------
T ss_pred cchhhhcCCcchHHHHHHHHHHhCCcHHHHHHHHHHHHHhhc----------ccCCceEEe-------------------
Confidence 555 4789999999999864 67899999999987774443 689899744
Q ss_pred CCCCCCCCCccCCCChHHHHHHHHHHHHHHhCCHhHHHhhhcHHHHHHHHHHHHhCCCCCCCce-eec-CCCccccc---
Q 006488 269 PDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLSVQERVDVQTGIKMILKLCLADGFDMFPTL-LVT-DGSCMIDR--- 343 (643)
Q Consensus 269 pd~Ge~a~~~ygsVDAtLWwIial~~Y~~~TGD~afl~~l~~~p~i~~iL~w~l~~gf~~~~~l-Lv~-dG~~w~D~--- 343 (643)
|..+ ....+..|=+++||+.+++|+++|||.+++++. +|.|++.|+++....-. ... +.. .-.||...
T Consensus 193 P~~~---~~~~~~~~w~l~~i~~~~~~y~~tGD~~~l~~~--~~~~~~~l~~~~~~~~~--~~~~~~~~~~~DW~~~~~~ 265 (509)
T PF05592_consen 193 PSYG---GGGFGIPDWSLAWIIIPWDYYLYTGDREFLEEY--YPAMKRYLDYLERRVDD--GLDGLPGWGFGDWLAPGND 265 (509)
T ss_dssp S------SSGGGBHHHHHHHHHHHHHHHHHHT-HHHHHHH--HHHHHHHHHHHHTTB-T--SSB-CCSB--S-SS----T
T ss_pred cccC---CCCCCCccHHHHHHHHHHHHHHHhCCHHHHHHH--HHHHHHHHHHHHHhCCc--cccCCCCCceeecCCccCc
Confidence 2221 011234566899999999999999999999998 99999999999863211 111 111 12366611
Q ss_pred ccCCCCCchhhHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhhhccccchhhhhhccc
Q 006488 344 RMGIHGHPLEIQALFYSALLSAREMLTPEDGSADLIRALNNRLVALSFHIREYYWIDMKKLNEIYRYKTEEYSYDAVNKF 423 (643)
Q Consensus 344 r~~r~G~pVEIQALwY~AL~~aaeLa~~~~g~~~~a~~l~~ra~~Lk~~~~~~FW~d~~~l~~iyr~~~e~y~~~a~~~~ 423 (643)
.....+..+-.|+++|.||+.+++|+..+ ++.+.++.++++|++||+.|+++||+++++.+.
T Consensus 266 ~~~~~~~~~~~~~~~~~~l~~~a~lA~~l-g~~~~a~~y~~~a~~lk~a~~~~~~d~~~g~~~----------------- 327 (509)
T PF05592_consen 266 GDGPTPGATITNALYYYALRAAAELAEAL-GKDEDAAEYRARAERLKAAINRHFWDPEKGGYA----------------- 327 (509)
T ss_dssp T---SCCEEHHHHHHHHHHHHHHHHHHHC-T-HHHHHHHHHHHHHHHHHHHHHCEETTTTEEC-----------------
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHHHHHhccCcccCccc-----------------
Confidence 12233445569999999999999999976 556679999999999999999999976544100
Q ss_pred CCCCCCCCccccccccCCCceeeecccCCccCcccccccchhhHhcCCCCHHHH-HHHHHHHHHhHHHhhccCCCcccCC
Q 006488 424 NIYPDQIPPWLVEFMPHIGGYLIGNLQPAHMDFRFFSLGNLWSVVSSLATVDQS-HAILDLIEAKWAELVADMPLKICYP 502 (643)
Q Consensus 424 n~~pdsip~~l~~f~~~~ggYL~~~v~p~~~d~r~~slGN~LAL~sglld~eqa-~~Vv~~l~~~w~~L~tp~gLR~l~P 502 (643)
+ ....+|++||.+|++++++. ..+.+.+.. .+...+.+
T Consensus 328 --------------------------~-------~sq~~~alAl~~gl~p~~~~~~~~~~~l~~----~~~~~~~~---- 366 (509)
T PF05592_consen 328 --------------------------D-------GSQHANALALLFGLVPEEERAAAALKRLAK----RIAANGYH---- 366 (509)
T ss_dssp --------------------------T-------TSHCHHHHCHHCCHC-HHHHTCHCHCHCHH----CCHCCCHS----
T ss_pred --------------------------C-------CchHHHHHHHHhchhhhhhhHHHHHHHHHH----HHHhcCCC----
Confidence 0 01236789999999987766 666665543 11111111
Q ss_pred CcCCCCceeecCCCCCCCCCccccCCCccchHHHHHHHHHHcCCHHHHHHHHHHHH-----HHhcC--CCCCccccCCCC
Q 006488 503 ALEGQEWRIITGSDPKNTPWSYHNGGSWPTLLWQLTVACIKMNRVEIAEKAVKLAE-----RHISG--DKWPEYYDTKRG 575 (643)
Q Consensus 503 ~~~~~~wr~~~~gd~~~~P~sYHNG~VWP~l~~~~a~Al~k~G~~~~A~~ll~~~~-----~~l~~--~~~pE~FDG~~g 575 (643)
.-.|.+ -..++..+|.++|+.+.|.+++.... ..+.. .-+.|.|++..+
T Consensus 367 ---------------------~~~g~~---g~~~~~~~L~~~g~~~~a~~~~~~~~~~~w~~ml~~g~tT~wE~w~~~~~ 422 (509)
T PF05592_consen 367 ---------------------LSTGFI---GSPYLLEALFRAGRADGAYDLLTQRDYPSWGYMLDQGATTLWEYWDGDGG 422 (509)
T ss_dssp -----------------------TCCC----CHHHHHHHHHCCHHCCHHHHHHHHHHHHCHHHHCTT-SS--SS-STT-T
T ss_pred ---------------------cCcccc---cHHHHHHHHHHcCCHHHHHHHHHhccccchhHHHhCCCCEEEEecCccCC
Confidence 011211 23466788889998888888874321 12332 227999997432
Q ss_pred -CCCCCCCCccchHHHHH-HHHHHHHhc-CCCCccc
Q 006488 576 -RFIGKQSRLYQTWSIAG-YLVAKLLLD-NPAAAKV 608 (643)
Q Consensus 576 -~p~G~~Ac~~QAWSaA~-~L~a~~lL~-~P~~~~~ 608 (643)
.+..+. .-+|+++- ..+...++. .|...+.
T Consensus 423 ~~~~~S~---~H~w~~~p~~~l~~~v~GI~p~~pG~ 455 (509)
T PF05592_consen 423 DPPNRSL---CHAWSAGPTYWLYRYVLGIRPTEPGF 455 (509)
T ss_dssp CTT-S-S---SBGGG-THHHHHHHCTS-EEESSGGG
T ss_pred CCCCCCC---CCCcchhHHHHHHHHhhceEeCCCCC
Confidence 223333 66888885 455566776 6665543
No 18
>PF04685 DUF608: Protein of unknown function, DUF608; InterPro: IPR006775 This domain is found in non-lysosomal glucosylceramidases that catalyze the conversion of glucosylceramide to free glucose and ceramide []. It is involved in sphingomyelin generation and prevention of glycolipid accumulation and may also catalyze the hydrolysis of bile acid 3-O-glucosides, however, the relevance of such activity is unclear in vivo []. ; GO: 0004348 glucosylceramidase activity, 0006665 sphingolipid metabolic process, 0016021 integral to membrane; PDB: 1V7V_A 1V7W_A 1V7X_A.
Probab=99.56 E-value=2.7e-15 Score=162.03 Aligned_cols=253 Identities=17% Similarity=0.198 Sum_probs=92.6
Q ss_pred cCCCChHHHHHHHHHHHHHHhCCHhHHHhhhcHHHHHHHHHHHHhCCCCCCCceeecC-CC--cccccccCCCCCchhhH
Q 006488 279 VAPVDSGLWWIILLRAYGKCSGDLSVQERVDVQTGIKMILKLCLADGFDMFPTLLVTD-GS--CMIDRRMGIHGHPLEIQ 355 (643)
Q Consensus 279 ygsVDAtLWwIial~~Y~~~TGD~afl~~l~~~p~i~~iL~w~l~~gf~~~~~lLv~d-G~--~w~D~r~~r~G~pVEIQ 355 (643)
...+|..++||+.+++|+++|||.+|+++. +|.+++||+|++. ++....+++.. |. .+.|. ....|...+++
T Consensus 95 ~~~~D~~~~fVL~vyr~~~~TGD~~fL~~~--wp~v~~a~~~~~~--~D~d~dGl~e~~g~~D~TyD~-~~~~G~say~~ 169 (365)
T PF04685_consen 95 YAWKDLNPKFVLQVYRDYKWTGDRDFLKEM--WPAVKKAMDYLLS--WDRDGDGLPENPGHPDQTYDD-WSMYGPSAYCG 169 (365)
T ss_dssp ----------------------------EH--HHHHHHHHHHHHH--SB--TTS-BEEET---SSSTT--EEEEEEHHHH
T ss_pred cccccccccccccccccccccccchhhhhH--HHHHHHHHHHHHh--hCCCCCCCCCCCCCCcccccc-CCeeCCCHHHH
Confidence 468999999999999999999999999987 9999999999996 45555554332 32 44564 23578889999
Q ss_pred HHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhhhccccchhhhhhcccCCCCCCCCcccc
Q 006488 356 ALFYSALLSAREMLTPEDGSADLIRALNNRLVALSFHIREYYWIDMKKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLV 435 (643)
Q Consensus 356 ALwY~AL~~aaeLa~~~~g~~~~a~~l~~ra~~Lk~~~~~~FW~d~~~l~~iyr~~~e~y~~~a~~~~n~~pdsip~~l~ 435 (643)
+||+.||+++++|++.+ ++.+.++++++.++..++.+++.+|..+ .|... +. ..+ .....+..|
T Consensus 170 ~L~laAL~A~~emA~~l-gd~~~a~~y~~~~~~~~~~~~~~LWnGe--yy~~~-~d-~~~----~~~~~~~aD------- 233 (365)
T PF04685_consen 170 GLWLAALRAAAEMAKIL-GDPELAAKYRELAEKAKKAFNKKLWNGE--YYRQW-YD-SKY----QNGDGCMAD------- 233 (365)
T ss_dssp HHHHHHHHHHHHHHHHH-T-HHHHHHHHHHHHHHHHHHHHHSEETT--EE--E-E----T----TS-EES-TT-------
T ss_pred HHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHHHHHhhCHh--heeee-ec-cCC----CCCCeEEeC-------
Confidence 99999999999999975 6678899999999999999999999754 11100 00 000 000000010
Q ss_pred ccccCCCceeeecccCCccCcccccccchhh---HhcCCCCHHHHHHHHHHHHHhHHHhh----ccCCCcccCCCcCCCC
Q 006488 436 EFMPHIGGYLIGNLQPAHMDFRFFSLGNLWS---VVSSLATVDQSHAILDLIEAKWAELV----ADMPLKICYPALEGQE 508 (643)
Q Consensus 436 ~f~~~~ggYL~~~v~p~~~d~r~~slGN~LA---L~sglld~eqa~~Vv~~l~~~w~~L~----tp~gLR~l~P~~~~~~ 508 (643)
+ ..|..++ -+-.|+|+++.++.++.|.+- -+. +++|+..+.=|
T Consensus 234 -----------------Q------l~Gqw~a~~~gl~~v~~~e~v~sAL~sI~~~--N~~~~~~~~~G~~n~~~p----- 283 (365)
T PF04685_consen 234 -----------------Q------LCGQWWARLLGLGDVLDEEKVKSALRSIYEY--NVKYFLGGEMGAVNGVWP----- 283 (365)
T ss_dssp ------------------------SS--EEHHHHHHTT-S-HHHHHHHHHHHHHH--HEE-S-BTTTBGGGGS-T-----
T ss_pred -----------------h------hhHHHHHHHcCCcCCCCHHHHHHHHHHHHHh--cCeEccCCCCcEEEeeec-----
Confidence 1 1132221 146779999999999999862 222 36666654322
Q ss_pred ceeecCCCCCCCCCccccCCCccchHHHHHHHHHHcCCHHHHHHHHHHHHHHhc-CCC--C--CccccCCCCCCCCCC-C
Q 006488 509 WRIITGSDPKNTPWSYHNGGSWPTLLWQLTVACIKMNRVEIAEKAVKLAERHIS-GDK--W--PEYYDTKRGRFIGKQ-S 582 (643)
Q Consensus 509 wr~~~~gd~~~~P~sYHNG~VWP~l~~~~a~Al~k~G~~~~A~~ll~~~~~~l~-~~~--~--pE~FDG~~g~p~G~~-A 582 (643)
+-...+-+.|...|||=+...+++.++..|..++|.++.+.+.++.. ..+ | ||.+++.. .+.+.. .
T Consensus 284 -------~g~~~~~~~q~~evW~G~~y~~Aa~mi~~G~~~e~~~~~~~~~~~~~~~~g~~f~~pE~~~~~~-~~r~~~Y~ 355 (365)
T PF04685_consen 284 -------DGKPDTSSPQSNEVWTGVEYAVAAHMIQEGMVEEGLEIAKGIYDRYYGRKGNPFNTPEAINADG-NYRGSHYM 355 (365)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -------cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-cccccccc
Confidence 11234456788889999999999999999999999999988766554 333 3 89988755 344422 2
Q ss_pred CccchHHH
Q 006488 583 RLYQTWSI 590 (643)
Q Consensus 583 c~~QAWSa 590 (643)
+..-.|++
T Consensus 356 R~ls~W~~ 363 (365)
T PF04685_consen 356 RPLSIWSM 363 (365)
T ss_dssp --------
T ss_pred cccccccc
Confidence 44556653
No 19
>COG3387 SGA1 Glucoamylase and related glycosyl hydrolases [Carbohydrate transport and metabolism]
Probab=99.56 E-value=8.8e-13 Score=150.83 Aligned_cols=350 Identities=17% Similarity=0.107 Sum_probs=225.7
Q ss_pred HHHHHHHHHHHhhccccCCcce-eeeccCCCC----ccccCCCccccchhHHHHHHhhccCChHHHHHHHHHHHhhhhcc
Q 006488 158 VEDEAWDLLRESIVYYCGNPVG-TIAANDPND----STILNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILHTLQLQSWE 232 (643)
Q Consensus 158 ~~~~A~~~Lr~~~v~~~~~p~G-~~Aa~d~~~----a~~~~Y~~vfGRDt~Isalg~L~~G~peiaR~~L~~~l~LQ~~e 232 (643)
++.+..-.|+.+ ...|.| .+|+.+.+- .+.+.|.-+|+||+.+++++++..|..+.++.++..+...|..+
T Consensus 245 ~~~rS~l~l~~~----~~~~~G~ivAs~t~~l~~~~~g~~dY~y~W~RD~~~~~~AL~~~G~~~~a~~~f~~l~~~~~~~ 320 (612)
T COG3387 245 ALYRSALVLKAL----NYNPTGAIVASPTTSLPELIGGTRDYRYVWPRDASYAALALLAIGYKKEALRFFEFLPDVQTPN 320 (612)
T ss_pred HHHHHHHHHHHc----ccCCCCcEEEcCCCCccccCCCCCCceEEccCcHHHHHHHHHHcCCHHHHHHHHHHHHHhhCCC
Confidence 555555555553 233444 455544221 22235999999999999999998999999999999998888754
Q ss_pred ccccCCCCCCC-CCCCccccccccCCCCCCCcccccCC-CCCCCCCCccCCCChHHHHHHHHHHHHHHhCCHhHHHhhhc
Q 006488 233 KTMDCHSPGQG-LMPASFKVRTVPLDGDDSATEEVLDP-DFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLSVQERVDV 310 (643)
Q Consensus 233 ~~ld~~q~~~G-liP~~fKi~~~~~r~~~~~~~~~l~p-d~Ge~a~~~ygsVDAtLWwIial~~Y~~~TGD~afl~~l~~ 310 (643)
.++...-..+| -++.+ .+ | ...+.+ +---+|-+.+=.+++..|.+..+|.-+..+. .
T Consensus 321 ~~~~~~y~~~g~~~~~~-----------------w~-~~~~~~~~--~pv~~~~~a~~~~~ld~~~~~~~~~~~~~~~-~ 379 (612)
T COG3387 321 GKLYHKYSIDGSDLAES-----------------WL-PVSGYYNS--FPVRIGNTALVQGALDVYGSIMNDIYFYAKY-Y 379 (612)
T ss_pred CceeeEEecCCCccccc-----------------cc-cccCCCCC--CceEEcchhhHHHHHHHHHHHHHHHHHHHhh-c
Confidence 43111111222 11110 10 1 001111 1234777888889999999999998877664 4
Q ss_pred HHHHHHHHHHHHhCCCCCCCceeecCCCcccccccCCCCCchhhHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHH
Q 006488 311 QTGIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALLSAREMLTPEDGSADLIRALNNRLVALS 390 (643)
Q Consensus 311 ~p~i~~iL~w~l~~gf~~~~~lLv~dG~~w~D~r~~r~G~pVEIQALwY~AL~~aaeLa~~~~g~~~~a~~l~~ra~~Lk 390 (643)
+..+..+.+++.. .-.....+-.++.+-|=. |.|+-.+..+.-|.||.+|+.||... ++...++.+...+..++
T Consensus 380 ~~~~~~~~~~~~~-~~~~~~~~~~p~~~~WEe----r~g~~~yt~~~~~agLd~A~~lA~~~-gd~~~a~~~~~~ad~ik 453 (612)
T COG3387 380 AIYILPAADYLRR-MEKIKANLPTPDFDLWEE----RGGHFTYTKATVYAGLDAAADLAEEF-GDKGSAEHWRKTADELK 453 (612)
T ss_pred chhhHHHHHHHHH-HHhhhcCCCCCccceecc----cCCcccchHHHHHHHHHHHHHHHHHh-CCcHHHHHHHHHHHHHH
Confidence 6666666666654 100111233455556654 45677899999999999999999985 57778999999999999
Q ss_pred HHHHHHhhhchhhhhhhhhccccchhhhhhcccCCCCCCCCccccccccCCCceeeecccCCccCcccccccchhh-Hhc
Q 006488 391 FHIREYYWIDMKKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEFMPHIGGYLIGNLQPAHMDFRFFSLGNLWS-VVS 469 (643)
Q Consensus 391 ~~~~~~FW~d~~~l~~iyr~~~e~y~~~a~~~~n~~pdsip~~l~~f~~~~ggYL~~~v~p~~~d~r~~slGN~LA-L~s 469 (643)
+.+.+.++..+.+.+.. .+.+ ..+.-+| +.+++ ..+
T Consensus 454 ~~v~~~~~~~~~~~f~r----------------------------------------~~~~-~~~~~vD--asll~l~~f 490 (612)
T COG3387 454 EAVLRRGYAEDGGYFVR----------------------------------------SLGR-KPDDTVD--ASLLGLVLF 490 (612)
T ss_pred HHHHHhcccccCCeeeh----------------------------------------hcCC-Ccccccc--HHHhhcccc
Confidence 99988887644322111 1110 0010112 12222 245
Q ss_pred CCC--CHHHHHHHHHHHHHhHHHhhccCCCcccCCCcCCCCceeecCCCCCCCCCccccC-CCccchHHHHHHHHHHcCC
Q 006488 470 SLA--TVDQSHAILDLIEAKWAELVADMPLKICYPALEGQEWRIITGSDPKNTPWSYHNG-GSWPTLLWQLTVACIKMNR 546 (643)
Q Consensus 470 gll--d~eqa~~Vv~~l~~~w~~L~tp~gLR~l~P~~~~~~wr~~~~gd~~~~P~sYHNG-~VWP~l~~~~a~Al~k~G~ 546 (643)
|+. +..+....++.|+. +|..+-| +|+.+.. .+.+ .+-++ ..||....-++..+...|+
T Consensus 491 g~i~~~D~~~~~t~~~I~~---~L~~~~~-----------gi~RY~~---~~~d-~~~~~~~~w~i~t~Wl~~~~~~~g~ 552 (612)
T COG3387 491 GFIPPDDPRILATVEAIER---ELLVDGG-----------GIRRYNN---EYDD-GLGGDNGPWIITTLWLSEYYLALGR 552 (612)
T ss_pred CccCCCCHHHHHHHHHHHH---HHhhcCC-----------cEEcCcc---cccc-ccCCCCCcceeehhHHHHHHHHccc
Confidence 664 44566777777775 6654432 2221111 1111 22222 5899998889999999999
Q ss_pred HHHHHHHHHHHHHHhcCCC-CCccccCCCCCCCCCCCCccchHHHHHHHHHHHHhcC
Q 006488 547 VEIAEKAVKLAERHISGDK-WPEYYDTKRGRFIGKQSRLYQTWSIAGYLVAKLLLDN 602 (643)
Q Consensus 547 ~~~A~~ll~~~~~~l~~~~-~pE~FDG~~g~p~G~~Ac~~QAWSaA~~L~a~~lL~~ 602 (643)
.+.|+++++.++.+-...+ +||=++..+|+|.|-. |||||=++++.+...+++
T Consensus 553 ~~~a~~ll~~l~~~a~~~gll~EQv~~~~G~~~g~~---PlawSha~~I~ai~~l~~ 606 (612)
T COG3387 553 LDEAKKLLEWLLAFASPLGLLPEQVDDGSGEPLGAF---PLAWSHAEFIIAIRELEE 606 (612)
T ss_pred hHHHHHHHHHHHHhcCCCCCcchhhcCCCCccCCCC---cchhhhHHHHHHHHHHHh
Confidence 9999999988877555555 6999999999998755 999999999988777653
No 20
>PF03200 Glyco_hydro_63: Mannosyl oligosaccharide glucosidase; InterPro: IPR004888 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of eukaryotic enzymes belonging to glycosyl hydrolase family 63 (GH63 from CAZY). They catalyse the specific cleavage of the non-reducing terminal glucose residue from Glc(3)Man(9)GlcNAc(2). Mannosyl oligosaccharide glucosidase 3.2.1.106 from EC is the first enzyme in the N-linked oligosaccharide processing pathway. ; GO: 0004573 mannosyl-oligosaccharide glucosidase activity, 0009311 oligosaccharide metabolic process
Probab=99.51 E-value=8.6e-13 Score=154.77 Aligned_cols=268 Identities=16% Similarity=0.160 Sum_probs=160.1
Q ss_pred CHhHHHhhhcHHHHHHHHHHHHhC--CC--CCC------Cc---eee--cCCCcccccccCCCCCc------hhhHHHHH
Q 006488 301 DLSVQERVDVQTGIKMILKLCLAD--GF--DMF------PT---LLV--TDGSCMIDRRMGIHGHP------LEIQALFY 359 (643)
Q Consensus 301 D~afl~~l~~~p~i~~iL~w~l~~--gf--~~~------~~---lLv--~dG~~w~D~r~~r~G~p------VEIQALwY 359 (643)
+.+|++++ .|.+++=.+|+... |- ..| ++ -+- .-.+-|-| +||.-+| |.-.+..+
T Consensus 490 ~~~~l~~~--yp~L~~~~~wf~~tQ~G~~~~~yrWrGr~~~~~~~lnp~~L~SGlDD--YPRa~~p~~~e~hvDl~sWMa 565 (801)
T PF03200_consen 490 DLEFLRRI--YPRLKRWYNWFNTTQAGDIPGSYRWRGRDPTTDRELNPHTLTSGLDD--YPRASHPSDSERHVDLTSWMA 565 (801)
T ss_pred HHHHHHHH--HHHHHHHHHHHhhccCCCCCCceeEcCCCCCccccccccCcCCCCCC--CCCCCCCCccceechHHHHHH
Confidence 56899987 99999999999842 10 011 11 000 00122223 4555444 56666667
Q ss_pred HHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhhhccccchhhhhhc--ccCCCCCC-CCccccc
Q 006488 360 SALLSAREMLTPEDGSADLIRALNNRLVALSFHIREYYWIDMKKLNEIYRYKTEEYSYDAVN--KFNIYPDQ-IPPWLVE 436 (643)
Q Consensus 360 ~AL~~aaeLa~~~~g~~~~a~~l~~ra~~Lk~~~~~~FW~d~~~l~~iyr~~~e~y~~~a~~--~~n~~pds-ip~~l~~ 436 (643)
.+-+.|++||..++...+ +..+.+.+..|+..+++..|+++.++|..+-..++ ++. .....+.. .+.-+.+
T Consensus 566 ~~a~~M~~IA~~L~~~d~-~~ef~~~~~~i~~~l~~~hWdeedgfYyD~~~~~~-----~v~l~~~~~~~~~~~~~~~~r 639 (801)
T PF03200_consen 566 FFALNMARIALELGKEDD-AYEFFEHFEYISDALNKLHWDEEDGFYYDVGLHPD-----AVRLEWKEVLENGQFRRELVR 639 (801)
T ss_pred HHHHHHHHHHHHhcCccc-HHHHHHHHHHHHHHHHHhcCCcccCceeeeccccc-----cceecccccccccccchhhee
Confidence 777778888876654333 33377888889999999999999998766533322 000 00000000 0000000
Q ss_pred cccCCCceeeecccCCccCcccccccchhhHhcCCCCH--HHHHHHHHHHHHhHHHhhccCCCcccCCCcCCCCceeecC
Q 006488 437 FMPHIGGYLIGNLQPAHMDFRFFSLGNLWSVVSSLATV--DQSHAILDLIEAKWAELVADMPLKICYPALEGQEWRIITG 514 (643)
Q Consensus 437 f~~~~ggYL~~~v~p~~~d~r~~slGN~LAL~sglld~--eqa~~Vv~~l~~~w~~L~tp~gLR~l~P~~~~~~wr~~~~ 514 (643)
+...+.. ...+. .....++++++.+++++ ++.++|++.|... +++++|+|||+++. .++- +.
T Consensus 640 ~~~~~~~-------~~~v~--~~Gyvsl~Plll~ll~~ds~~L~~~L~~l~D~-~ef~s~yGirSLSk--~~~~----y~ 703 (801)
T PF03200_consen 640 VVRGEPQ-------LQLVC--HFGYVSLFPLLLGLLPPDSERLERLLERLLDE-DEFWSPYGIRSLSK--SDPF----YG 703 (801)
T ss_pred cccCCcc-------cccee--eecccCCCchhhccCCCCHHHHHHHHHHhcCh-hhccCCCCCccccC--CCcc----cc
Confidence 1000000 00000 01112455677788775 4778999998733 58999999999887 4442 22
Q ss_pred CCCCCCCCccccCCCccchHHHHHHHHHHcCC-----HHHHHHHHH--------HHHHHhcCCC-CCccccCCCCCCCCC
Q 006488 515 SDPKNTPWSYHNGGSWPTLLWQLTVACIKMNR-----VEIAEKAVK--------LAERHISGDK-WPEYYDTKRGRFIGK 580 (643)
Q Consensus 515 gd~~~~P~sYHNG~VWP~l~~~~a~Al~k~G~-----~~~A~~ll~--------~~~~~l~~~~-~pE~FDG~~g~p~G~ 580 (643)
.+-...+-+||+|+||..+|++++.||.+++. .+.|.++-. .+.+.....+ +.|+|++.+|++.|+
T Consensus 704 ~~~~e~d~~YWRGpIW~~~NyL~i~aL~~y~~~~g~~~~~a~~~y~~Lr~nli~nv~~~~~~tg~~~E~Y~~~tG~g~g~ 783 (801)
T PF03200_consen 704 PGENEHDPSYWRGPIWIPINYLLIEALRRYGYYYGPYQERAKEIYKELRKNLINNVYKEYKRTGYFWEQYNPETGRGQGA 783 (801)
T ss_pred ccCCccCCCcccCccchhhHHHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHHHhhcccEEEeECCCCCcccCC
Confidence 22222334899999999999999999999984 233333322 1223333444 699999999998886
Q ss_pred CCCccch-HHHHHHHHHH
Q 006488 581 QSRLYQT-WSIAGYLVAK 597 (643)
Q Consensus 581 ~Ac~~QA-WSaA~~L~a~ 597 (643)
. +|+ ||+..++++.
T Consensus 784 ~---~FtGWtslv~~im~ 798 (801)
T PF03200_consen 784 H---PFTGWTSLVVLIMA 798 (801)
T ss_pred C---CCCchHHHHHHHHh
Confidence 6 887 9998876553
No 21
>TIGR01535 glucan_glucosid glucan 1,4-alpha-glucosidase. Glucan 1,4-alpha-glucosidase catalyzes the hydrolysis of terminal 1,4-linked alpha-D-glucose residues from non-reducing ends of polysaccharides, releasing a beta-D-glucose monomer. Some forms of this enzyme can hydrolyze terminal 1,6- and 1,3-alpha-D-glucosidic bonds in polysaccharides as well.
Probab=99.37 E-value=3.8e-10 Score=129.93 Aligned_cols=356 Identities=16% Similarity=0.089 Sum_probs=213.0
Q ss_pred ccchHHHHHHHHHHHhhccccCCc-ceeeeccCCC----Cccc--cCCCccccchhHHHHHHhhccCChHHHHHHHHHHH
Q 006488 154 WAKSVEDEAWDLLRESIVYYCGNP-VGTIAANDPN----DSTI--LNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILHTL 226 (643)
Q Consensus 154 ~~~~~~~~A~~~Lr~~~v~~~~~p-~G~~Aa~d~~----~a~~--~~Y~~vfGRDt~Isalg~L~~G~peiaR~~L~~~l 226 (643)
...+++++++-.|+.+. ..++ -++|||...+ ..+. -.|.-||.||+..++.+++..|..+.++.++..+.
T Consensus 248 ~~~~~~~rS~lvLK~~~---d~~~~GAiIAA~Tts~pe~~g~~~n~dYryvW~RD~a~~a~AL~~~G~~~~a~~~~~~l~ 324 (648)
T TIGR01535 248 KGNSLYYVSMMILKAHE---DKTNPGAYIASLSIPWGDGQADDNTGGYHLVWPRDLYQVANAFLAAGDVDSALRSLDYLA 324 (648)
T ss_pred hHHHHHHHHHHHHHHhc---CCCCCCcEEEecCCCCCccCCCCCCCceEEEehhhHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 34567888888888753 3334 4455554322 1222 24889999999999999999999999999999998
Q ss_pred hhhhccccccCCCCCCCCCCCccccccccCCCCCCCcccccCCCCCCCCCCccCCCChHHHHHHHHHHHHHHhCCHhHHH
Q 006488 227 QLQSWEKTMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLSVQE 306 (643)
Q Consensus 227 ~LQ~~e~~ld~~q~~~GliP~~fKi~~~~~r~~~~~~~~~l~pd~Ge~a~~~ygsVDAtLWwIial~~Y~~~TGD~afl~ 306 (643)
+.|. .+|..+..+.| . ++ +...+ -..|-+=..|++++.+++. +..
T Consensus 325 ~~~~----------~~G~~lq~y~v-----d-------G~--~~~~~------iQlD~~g~~i~~~~~l~~~--~~~--- 369 (648)
T TIGR01535 325 KVQQ----------DNGMFPQNSWV-----D-------GK--PYWTG------IQLDETAFPILLAYRLHRY--DHA--- 369 (648)
T ss_pred HHhc----------cCCCcCceecc-----C-------CC--CCCCC------ccccHHHHHHHHHHHHHHc--CcH---
Confidence 8776 34444443321 1 11 11111 2567777778888776653 332
Q ss_pred hhhcHHHHHHHHHHHHhCCCCCCCceeecCCCcccccccCCCCCchhhHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHH
Q 006488 307 RVDVQTGIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALLSAREMLTPEDGSADLIRALNNRL 386 (643)
Q Consensus 307 ~l~~~p~i~~iL~w~l~~gf~~~~~lLv~dG~~w~D~r~~r~G~pVEIQALwY~AL~~aaeLa~~~~g~~~~a~~l~~ra 386 (643)
.+ ++.++.+.+++...+ -.++-.-|=. +.|+--.+-+-.|.||.+|++|++.. ++.+.++++.+.|
T Consensus 370 ~~--~~~vk~aadfl~~~~-------p~p~~d~WEe----r~g~~~~T~a~v~aaL~~Aa~iA~~~-g~~~~a~~w~~~A 435 (648)
T TIGR01535 370 FY--DKMLKPAADFIVKNG-------PKTGQERWEE----IGGYSPSTLAAEIAGLTAAADIAEQN-GDAGSAQKYRETA 435 (648)
T ss_pred HH--HHHHHHHHHHHHHcC-------CCCCCCcccc----cCCcCchhHHHHHHHHHHHHHHHHHc-CCcHHHHHHHHHH
Confidence 23 788999999998642 2333334543 34554566666779999999999975 4456789999999
Q ss_pred HHHHHHHHHHhhhch-----hhhhhhhhccccchhhhhhcccCCCCCCCCccccccccCCCceeeecccCCcc-Cccccc
Q 006488 387 VALSFHIREYYWIDM-----KKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEFMPHIGGYLIGNLQPAHM-DFRFFS 460 (643)
Q Consensus 387 ~~Lk~~~~~~FW~d~-----~~l~~iyr~~~e~y~~~a~~~~n~~pdsip~~l~~f~~~~ggYL~~~v~p~~~-d~r~~s 460 (643)
..++..|.+++|.++ .+.|.- .. |+.-| ++.+...+.|-++... +..+|
T Consensus 436 d~i~~~i~~~~~~~~g~~~~~~~f~r-----------~~------~~~~~-------~~~~~~~~~n~~~~~~~~~~vD- 490 (648)
T TIGR01535 436 DNWQKLIENWTFTTNGPLGDGQYYLR-----------IA------GLGDP-------NADFLINIANGGGVYPEKEVLD- 490 (648)
T ss_pred HHHHHHHHHhCcCCCcccCCCCeEEE-----------ee------cCCCC-------ccccccccccccccCCCCCccC-
Confidence 999999999999876 332211 00 00000 0011112222222111 11122
Q ss_pred ccchhh-HhcCCCCH--HHHHHHHHHHHHhHHHhhccC---C-CcccCCCcCCCCceeecCCCCCCCCCccccCCCccch
Q 006488 461 LGNLWS-VVSSLATV--DQSHAILDLIEAKWAELVADM---P-LKICYPALEGQEWRIITGSDPKNTPWSYHNGGSWPTL 533 (643)
Q Consensus 461 lGN~LA-L~sglld~--eqa~~Vv~~l~~~w~~L~tp~---g-LR~l~P~~~~~~wr~~~~gd~~~~P~sYHNG~VWP~l 533 (643)
+.+|. ..+|++++ .+...-++.|++ +|...- | ++ -|. ..+|.....+.+.+ .-.+|-.||.+
T Consensus 491 -aSlL~L~~~G~~~~dDPri~~Tl~aIe~---~L~~~~~~~g~~~-RY~---~Dgyg~~~~~~~~~---~~~~G~~Wpi~ 559 (648)
T TIGR01535 491 -PGFLELVRLGVKSPDDPHILATLKEIDS---TIKVDTPKGPSWY-RYT---HDGYGEPAKTEAYD---GTGKGRLWPLL 559 (648)
T ss_pred -HHHHHHHHcCCcCCCCHHHHHHHHHHHH---HhccCCCCCCeEE-ecC---CCCCCCcCCCCCcc---CCcCCceeehh
Confidence 34453 36887554 455555555654 554321 1 11 011 12232222222211 12457789999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHhcCCC-CCccccCCC---------CCCCCCCCCccchHHHHHHHHHHHHhc
Q 006488 534 LWQLTVACIKMNRVEIAEKAVKLAERHISGDK-WPEYYDTKR---------GRFIGKQSRLYQTWSIAGYLVAKLLLD 601 (643)
Q Consensus 534 ~~~~a~Al~k~G~~~~A~~ll~~~~~~l~~~~-~pE~FDG~~---------g~p~G~~Ac~~QAWSaA~~L~a~~lL~ 601 (643)
.+-.+.-.+..|. .|..+++-++.+-...+ +||=.+..+ |+|.| +..|=+||-|+|+.+.+-+.
T Consensus 560 T~~~~~y~l~~~~--~a~~~l~~~~~~a~~~g~lpEQV~d~~~~~~~~~~~G~pt~--Sa~PL~WsHA~yi~l~~s~~ 633 (648)
T TIGR01535 560 TGERGHYELAAGK--DATPYLKAMEKFANEGGMIPEQVWDQTDLPSRGLFYGLPTD--SASPLNWAHAEYVKLLRSNI 633 (648)
T ss_pred hhHHHHHHHHcCC--hHHHHHHHHHHhcCcCCCcCcccCCCCCCcccccccCCcCC--ccccchhhHHHHHHHHHHhh
Confidence 7666666556665 46677777776655555 699886655 44443 56799999999998877665
No 22
>COG3459 Cellobiose phosphorylase [Carbohydrate transport and metabolism]
Probab=99.24 E-value=4.3e-10 Score=130.55 Aligned_cols=282 Identities=22% Similarity=0.264 Sum_probs=202.0
Q ss_pred chhHHHHHHhhccCChHHHHHHHHHHHhhhhccccccCCCCCCCCCCCccccccccCCCCCCCcccccCCCCCCCCCCcc
Q 006488 200 RDFIPSGIAFLLKGEYDIVRNFILHTLQLQSWEKTMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDFGEAAIGRV 279 (643)
Q Consensus 200 RDt~Isalg~L~~G~peiaR~~L~~~l~LQ~~e~~ld~~q~~~GliP~~fKi~~~~~r~~~~~~~~~l~pd~Ge~a~~~y 279 (643)
||..==.+.++.. +|+.+|..|+.++..|= .+|-.|+-| .|+.+..---+.
T Consensus 615 RD~~Qd~l~f~~~-~p~~aR~qIl~~as~Qf----------~eGd~~hWf------------------~p~t~ag~qir~ 665 (1056)
T COG3459 615 RDQLQDTLEFLLA-RPALARKQILDAASRQF----------VEGDVQHWF------------------LPDTYAGVQIRT 665 (1056)
T ss_pred ccccccchhhhhc-CHHHHHHHHHHHHhhcc----------cCCCccccc------------------cccccccchhhc
Confidence 8887777777665 59999998876664333 446666655 122221100133
Q ss_pred CCCChHHHHHHHHHHHHHHhCCHhHHHh-----------------hhcHHHHHHHHHHHHhCCCCCCCceeecCCCcccc
Q 006488 280 APVDSGLWWIILLRAYGKCSGDLSVQER-----------------VDVQTGIKMILKLCLADGFDMFPTLLVTDGSCMID 342 (643)
Q Consensus 280 gsVDAtLWwIial~~Y~~~TGD~afl~~-----------------l~~~p~i~~iL~w~l~~gf~~~~~lLv~dG~~w~D 342 (643)
..-|--+|.+-++..|.+.|||.+++.+ -.+..++.++|+..... +... ++...-|.||-|
T Consensus 666 ~~sDdvvWl~~a~~~Yl~~TGD~aILdE~iPf~~~~~l~~~s~e~~TLyEH~~rAld~av~r-~g~~-glpli~gGDWND 743 (1056)
T COG3459 666 SISDDVVWLLKAIADYLKETGDAAILDEVIPFIDGPALPEFSKEQATLYEHCARALDLAVAR-LGPH-GLPLILGGDWND 743 (1056)
T ss_pred ccCCceeeeHHHHHHHHHhcCcHhhhhccccccCCCccccccccchhHHHHHHHHHHHHHHh-cCCC-CcccccCCcccc
Confidence 4567789999999999999999998876 12467888888888741 1111 122223467887
Q ss_pred ccc---C--CCCCchhhHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhhhccccchhh
Q 006488 343 RRM---G--IHGHPLEIQALFYSALLSAREMLTPEDGSADLIRALNNRLVALSFHIREYYWIDMKKLNEIYRYKTEEYSY 417 (643)
Q Consensus 343 ~r~---~--r~G~pVEIQALwY~AL~~aaeLa~~~~g~~~~a~~l~~ra~~Lk~~~~~~FW~d~~~l~~iyr~~~e~y~~ 417 (643)
. | + .-|-.|=+--+.+.+|+...+|++.+ ++.+.+..+++-+++++.....+=|+.+ .|+. .|+
T Consensus 744 ~-ln~vg~~g~geSv~lgW~l~~tlq~F~~lak~r-~d~~r~~~~~~~~ea~~~~~~~~~wDg~-----wy~r---~~~- 812 (1056)
T COG3459 744 G-LNLVGNGGKGESVWLGWFLALTLQTFKELAKAR-GDEARADTWAKHVEALREALETNGWDGE-----WYRR---GYG- 812 (1056)
T ss_pred c-ccccccCCccceeehhhHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHHHHHHhcCCCcc-----eEEe---ccc-
Confidence 6 3 2 23456778888999999999999974 6667788999999999999999999731 1211 111
Q ss_pred hhhcccCCCCCCCCccccccccCCCceeeecccCCccCcccccccchhhHhcCCCCHHHHHHHHHHHHHhHHHhhccCCC
Q 006488 418 DAVNKFNIYPDQIPPWLVEFMPHIGGYLIGNLQPAHMDFRFFSLGNLWSVVSSLATVDQSHAILDLIEAKWAELVADMPL 497 (643)
Q Consensus 418 ~a~~~~n~~pdsip~~l~~f~~~~ggYL~~~v~p~~~d~r~~slGN~LAL~sglld~eqa~~Vv~~l~~~w~~L~tp~gL 497 (643)
+.|-+|. .|...-.+++.+++-+++++|..+++++++-|+.|.+ .|+.|.||
T Consensus 813 ----------------------d~g~~lg---s~e~~E~qI~~i~qs~sVlSg~gd~~ra~kaMd~v~k---~L~~pdgv 864 (1056)
T COG3459 813 ----------------------DDGTPLG---SPEDEECQIDSIPQSWSVLSGEGDKERAEKAMDSVMK---YLVDPDGV 864 (1056)
T ss_pred ----------------------cCCCccc---CCCCcccceeeeccchhhhhCCCChHHHHHHHHHHHH---hccCcccc
Confidence 0122231 3444445688999999999999999999999999986 99999999
Q ss_pred cccCCCcCCCCceeecCCCCCC----CCCccccCCCccchHHHHHHHHHHcCCHHHHHHHHHHH
Q 006488 498 KICYPALEGQEWRIITGSDPKN----TPWSYHNGGSWPTLLWQLTVACIKMNRVEIAEKAVKLA 557 (643)
Q Consensus 498 R~l~P~~~~~~wr~~~~gd~~~----~P~sYHNG~VWP~l~~~~a~Al~k~G~~~~A~~ll~~~ 557 (643)
|..-||++ ++.+++.+ -|..=-||+...|-+--++.|+.|.|+.++|.+++..+
T Consensus 865 rL~tppf~------~~~~~~gyiK~y~pgvREnGgQYtHa~~w~i~Alak~G~a~eAw~~f~~i 922 (1056)
T COG3459 865 RLFTPPFS------YTKGDPGYIKRYPPGVRENGGQYTHAATWVILALAKMGRADEAWELFDKI 922 (1056)
T ss_pred EecCCccc------ccCCCCCeeecCCcccccccceeecccHHHHHHHHhhccHHHHHHHHHhc
Confidence 99999874 23333333 45556799999999888899999999999999998765
No 23
>COG1626 TreA Neutral trehalase [Carbohydrate transport and metabolism]
Probab=98.95 E-value=1.9e-07 Score=104.07 Aligned_cols=312 Identities=16% Similarity=0.236 Sum_probs=205.7
Q ss_pred cCCCccccchhHHHHHHhhccCChHHHHHHHHHHHhhhhccccccCCCCCCCCCCCccccccccCCCCCCCcccccCCCC
Q 006488 192 LNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILHTLQLQSWEKTMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDF 271 (643)
Q Consensus 192 ~~Y~~vfGRDt~Isalg~L~~G~peiaR~~L~~~l~LQ~~e~~ld~~q~~~GliP~~fKi~~~~~r~~~~~~~~~l~pd~ 271 (643)
-.|..+++=|+--.++|++.+|+.++|+..+..|+. .++ ..|.|||-- |
T Consensus 167 GRF~ElYyWDsYf~~lGL~esgr~d~a~~Mv~nF~~------~Ie----~yG~IpNgn-------R-------------- 215 (558)
T COG1626 167 GRFNELYYWDSYFTMLGLAESGRWDLAKGMVDNFAY------EIE----TYGHIPNGN-------R-------------- 215 (558)
T ss_pred cccccchHHHHHHHHHHHhhcCcHHHHHHHHHHHHH------HHH----HhccccCCc-------e--------------
Confidence 368899999999999999999999999999988872 222 458888731 1
Q ss_pred CCCCCCccCCCChHHHHHHHHHHHHHHhCCHhHHHhhhcHHHHHHHHHHHHh--CCCCCC---------Cceeec-----
Q 006488 272 GEAAIGRVAPVDSGLWWIILLRAYGKCSGDLSVQERVDVQTGIKMILKLCLA--DGFDMF---------PTLLVT----- 335 (643)
Q Consensus 272 Ge~a~~~ygsVDAtLWwIial~~Y~~~TGD~afl~~l~~~p~i~~iL~w~l~--~gf~~~---------~~lLv~----- 335 (643)
.||=+--..+-|-.++-.+++..|+.. +++. .+.+.+...+... .+++-. +.+..+
T Consensus 216 -----tYyLsRSQPPff~~Mv~~~~~~~g~~~-~~r~--l~~~~key~~w~~~~~~l~~~~~~~~~~~~~dG~~pe~ln~ 287 (558)
T COG1626 216 -----TYYLSRSQPPFFALMVELVAEHEGVAA-LKRY--LPALIKEYAYWMDGVPSLQPKQGYSRVVTLGDGSPPEVLNR 287 (558)
T ss_pred -----eeEeecCCCCcHHHHHHHHHHhhcHHH-HHHH--HHHHHHHHHHHhccCcccCccccceeEEecCCCCchhhhhh
Confidence 122233334557788888888889544 4444 5555555543332 111110 011100
Q ss_pred ----------------------------------C------C----Ccccccc--cC----CCCCchhhHHHHHHHHHHH
Q 006488 336 ----------------------------------D------G----SCMIDRR--MG----IHGHPLEIQALFYSALLSA 365 (643)
Q Consensus 336 ----------------------------------d------G----~~w~D~r--~~----r~G~pVEIQALwY~AL~~a 365 (643)
| | +-|++.+ .+ -+-.|++.|++.|.-....
T Consensus 288 y~dd~~tpr~Esy~~t~~~a~~~~~r~~~eiy~~dRA~reSGwD~ssRw~g~~~~LasIrt~~~~p~dlna~~y~~e~~~ 367 (558)
T COG1626 288 YWDDRDTPRQESYHETIATAKHNPERPLDEIYRDDRAGRESGWDFSSRWLGVPAPLASIRTTSILPVDLNALLYKLEEII 367 (558)
T ss_pred hhcccCCccchhhhhhHHHhhcCcCCChHhhhcchhhhHhccCcccccccCCCccccceeccccchhhhhhHHHHHHHHH
Confidence 0 0 0122111 00 1124689999999999998
Q ss_pred HhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhhhccccchhhhhhcccCCCCCCCCccccccccCCCcee
Q 006488 366 REMLTPEDGSADLIRALNNRLVALSFHIREYYWIDMKKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEFMPHIGGYL 445 (643)
Q Consensus 366 aeLa~~~~g~~~~a~~l~~ra~~Lk~~~~~~FW~d~~~l~~iyr~~~e~y~~~a~~~~n~~pdsip~~l~~f~~~~ggYL 445 (643)
+.+... .++.+.++.+.++|++-+.+|++++|+++.+.+..|..+.+. . --
T Consensus 368 ~~~~~~-~~~~~~~e~~~~~A~~R~~aI~~ylW~~e~G~~~DYd~k~~~------------~--------------~~-- 418 (558)
T COG1626 368 ANISAI-KGDKETAERYQRKAEARRCAINKYLWDDEAGQYNDYDWKLKK------------R--------------RA-- 418 (558)
T ss_pred HHHHHh-cCchHHHHHHHHHHHHHHHHHHHHccccccceeehhhhhccc------------c--------------cc--
Confidence 888876 357778899999999988999999999999887776432110 0 00
Q ss_pred eecccCCccCcccccccchhhHhcCCCCHHHHHHHHHHHHHhHHHhhccCCCcccCCCcCCCCceeecCCCCCCCCCccc
Q 006488 446 IGNLQPAHMDFRFFSLGNLWSVVSSLATVDQSHAILDLIEAKWAELVADMPLKICYPALEGQEWRIITGSDPKNTPWSYH 525 (643)
Q Consensus 446 ~~~v~p~~~d~r~~slGN~LAL~sglld~eqa~~Vv~~l~~~w~~L~tp~gLR~l~P~~~~~~wr~~~~gd~~~~P~sYH 525 (643)
..+..++.+++.|+++++|++.+++.+.. .|..|-||-++-|- .-+-|-|=
T Consensus 419 ------------y~~a~~~~plw~G~a~~era~~~a~~~~~---~l~~pGGl~ast~~--------------s~~QWD~P 469 (558)
T COG1626 419 ------------YLSAAALWPLWVGLATPERAQRLADAALS---MLEQPGGLSASTPR--------------SGQQWDYP 469 (558)
T ss_pred ------------ccchhhhhhccCCCCCHHHHHHHHHHHHH---HhcCCCceeccccc--------------ccccccCC
Confidence 22445677899999999999999999886 78888888765441 13445666
Q ss_pred cCCCccchHHHHHHHHHHcCCHHHHHHHHHHHHH---Hh-c-CCCCCccccCCCCC-CCCCCCC----ccchHHHHHHHH
Q 006488 526 NGGSWPTLLWQLTVACIKMNRVEIAEKAVKLAER---HI-S-GDKWPEYYDTKRGR-FIGKQSR----LYQTWSIAGYLV 595 (643)
Q Consensus 526 NG~VWP~l~~~~a~Al~k~G~~~~A~~ll~~~~~---~l-~-~~~~pE~FDG~~g~-p~G~~Ac----~~QAWSaA~~L~ 595 (643)
|| |+=+-|+...||.|+|....|.++....+. ++ . +..+=|-||=..+. +.|..++ ..+.|+-+.+|.
T Consensus 470 Ng--WaPlq~ia~~gL~ryG~~~la~~ia~rwL~~v~~~~d~~~~~VEKydv~~~~~~~g~~geyp~q~GFGWtNgv~l~ 547 (558)
T COG1626 470 NG--WAPLQWIATQGLKRYGYDILADDIARRWLTNVEQFYDYEGKLVEKYDVSRGTGPGGGGGEYPLQDGFGWTNGVVLK 547 (558)
T ss_pred CC--CccHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhcccceeEeeecccccCCCCCcccCCcccccchhHHHHH
Confidence 76 999999999999999998877777654432 23 1 23356655533221 1111122 347999999998
Q ss_pred HHHHhcC
Q 006488 596 AKLLLDN 602 (643)
Q Consensus 596 a~~lL~~ 602 (643)
+..++..
T Consensus 548 lL~~~~~ 554 (558)
T COG1626 548 LLDLYGP 554 (558)
T ss_pred HHHhhCc
Confidence 8877753
No 24
>KOG2161 consensus Glucosidase I [Carbohydrate transport and metabolism]
Probab=98.88 E-value=1.8e-07 Score=106.55 Aligned_cols=279 Identities=16% Similarity=0.147 Sum_probs=160.4
Q ss_pred HHHHHHHHHHHh--C----C--HhHHHhhhcHHHHHHHHHHHHhC--C-------CCCC-----------Ccee-ecCCC
Q 006488 288 WIILLRAYGKCS--G----D--LSVQERVDVQTGIKMILKLCLAD--G-------FDMF-----------PTLL-VTDGS 338 (643)
Q Consensus 288 wIial~~Y~~~T--G----D--~afl~~l~~~p~i~~iL~w~l~~--g-------f~~~-----------~~lL-v~dG~ 338 (643)
.+.+++++.+.. - | .+|++++ .|.+.+=..|+..+ | |+.- ++.+ .++-+
T Consensus 507 Lllav~~~~~~~~~~~~~~~r~~~fL~r~--fprLl~~f~Wf~~sQ~G~~~~~~~~~n~~YrWrGR~~~~~t~lnp~~L~ 584 (849)
T KOG2161|consen 507 LLLAVYRLLNREREMYGREDRSLTFLKRL--FPRLLKWFTWFRKSQEGKNVFEEGFDNEGYRWRGRDLPTGTTLNPHCLS 584 (849)
T ss_pred eHHHHHHHHhhhhhhccccchHHHHHHHH--HHHHHHhhhhhhhcccCCcccccccccceeEeccCCCCCCceecccccc
Confidence 355667765442 1 2 4899987 89888888888742 2 2110 1112 12234
Q ss_pred cccccccCCCCCc------hhhHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhhhccc
Q 006488 339 CMIDRRMGIHGHP------LEIQALFYSALLSAREMLTPEDGSADLIRALNNRLVALSFHIREYYWIDMKKLNEIYRYKT 412 (643)
Q Consensus 339 ~w~D~r~~r~G~p------VEIQALwY~AL~~aaeLa~~~~g~~~~a~~l~~ra~~Lk~~~~~~FW~d~~~l~~iyr~~~ 412 (643)
.|||- +||.-+| |+.=+..+-|-+.+-.++..++....+....... .+.++.+.+.-|.++.+.|..+-..+
T Consensus 585 SGlDD-yPRAs~Ps~~ElhvDl~~W~~lasrsl~~iae~lg~~~~E~~~a~~e-~~~~e~L~~~HW~ee~~~y~D~g~h~ 662 (849)
T KOG2161|consen 585 SGLDD-YPRASHPSVLELHVDLRCWVGLASRSLNRIAEFLGETEAEYATAITE-LECKENLVQNHWSEEDQAYCDFGNHT 662 (849)
T ss_pred ccccc-cccccCchHHHHhhhhHHHHHHHHHHHHHHHHHhcchhhhhhhhhhH-HHHHHHHHHhccChhhCeeeeccCCh
Confidence 67874 8888888 5666777788888888887654433211111112 23467888899999998876643222
Q ss_pred cchhhhhhcccCCCCCCCCccccccccCCCceeeecccCCccCcc-cc-ccc--chhhHhcCC--CCHHHHHHHHHHHHH
Q 006488 413 EEYSYDAVNKFNIYPDQIPPWLVEFMPHIGGYLIGNLQPAHMDFR-FF-SLG--NLWSVVSSL--ATVDQSHAILDLIEA 486 (643)
Q Consensus 413 e~y~~~a~~~~n~~pdsip~~l~~f~~~~ggYL~~~v~p~~~d~r-~~-slG--N~LAL~sgl--ld~eqa~~Vv~~l~~ 486 (643)
++- ..++.|..+. ..+++-.+ ++...|+. + ++ .+| +++++...| ++.++-.+++++|..
T Consensus 663 ~dv------~~~~~p~~g~--~~r~~~r~----v~~~~p~~---e~v~~h~GYvSl~P~mlrLlp~~S~rL~~~Ldli~D 727 (849)
T KOG2161|consen 663 EDV------SITPEPSIGK--QFRGLVRR----VDWFVPNL---ELVDRHIGYVSLFPFMLRLLPATSPRLTKLLDLISD 727 (849)
T ss_pred hhc------cccccCCccc--chhhhhee----ccccCCcc---eeeecccceeehhhhHHhhcCCCchHHHHHHHHhcC
Confidence 211 2333343221 01110000 00000111 1 11 222 233444344 566788889999864
Q ss_pred hHHHhhccCCCcccCCCcCCCCceeecCCCCCCCCCccccCCCccchHHHHHHHHHH-cCC-----HHHHHHHHHHH---
Q 006488 487 KWAELVADMPLKICYPALEGQEWRIITGSDPKNTPWSYHNGGSWPTLLWQLTVACIK-MNR-----VEIAEKAVKLA--- 557 (643)
Q Consensus 487 ~w~~L~tp~gLR~l~P~~~~~~wr~~~~gd~~~~P~sYHNG~VWP~l~~~~a~Al~k-~G~-----~~~A~~ll~~~--- 557 (643)
. .++++|||||+++- .++ +++.--...+-+||+|+||-.+|.++..||.+ |.. ...|+++-+.+
T Consensus 728 ~-~~lwSpYGlrSLS~--~s~----yym~~Nte~d~pYWRGpIW~N~NYLiLsaL~~~Y~~~~gp~~~nA~~iyeELRaN 800 (849)
T KOG2161|consen 728 E-NELWSPYGLRSLSR--SSP----YYMKRNTEHDPPYWRGPIWMNVNYLILSALRHFYLYVPGPYQSNAAKIYEELRAN 800 (849)
T ss_pred c-ccccCcchhhhhhh--cCC----ccccccCCCCCcccccceeeehHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHH
Confidence 3 68999999999874 333 22211111222899999999999999999999 433 23444444332
Q ss_pred -----HHHhcCCC-CCccccCCCCCCCCCCCCccchHHHHHHH
Q 006488 558 -----ERHISGDK-WPEYYDTKRGRFIGKQSRLYQTWSIAGYL 594 (643)
Q Consensus 558 -----~~~l~~~~-~pE~FDG~~g~p~G~~Ac~~QAWSaA~~L 594 (643)
.+..+..+ |-|+||+.+|++.|+. ..-.||+=.++
T Consensus 801 lv~Nv~k~~~~tG~~wE~Yd~~tG~G~ga~--~FtGWTaLVl~ 841 (849)
T KOG2161|consen 801 LVGNVSKQWQQTGYFWENYDPRTGRGLGAR--HFTGWTALVLL 841 (849)
T ss_pred HHHHHHHHhhccceeeeecCCCCCCccccc--cccchHHHHHH
Confidence 23345555 5999999999987743 34569875443
No 25
>KOG0602 consensus Neutral trehalase [Carbohydrate transport and metabolism]
Probab=98.69 E-value=1.4e-06 Score=98.73 Aligned_cols=325 Identities=14% Similarity=0.127 Sum_probs=205.1
Q ss_pred cCCCccccchhHHHHHHhhccCChHHHHHHHHHHHhhhhccccccCCCCCCCCCCCccccccccCCCCCCCcccccCCCC
Q 006488 192 LNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILHTLQLQSWEKTMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDF 271 (643)
Q Consensus 192 ~~Y~~vfGRDt~Isalg~L~~G~peiaR~~L~~~l~LQ~~e~~ld~~q~~~GliP~~fKi~~~~~r~~~~~~~~~l~pd~ 271 (643)
-.|.+.+.=|+.-.+.|+|.++..+.+|+.+..+..+ ++ ..|.|||..++.
T Consensus 181 gRF~E~YyWDsywii~GLl~S~m~~takGmieNf~~l------V~----~yG~ipNg~R~Y------------------- 231 (600)
T KOG0602|consen 181 GRFRELYYWDSYWIIKGLLASQMFDTAKGMIENFISL------VD----TYGFIPNGGRVY------------------- 231 (600)
T ss_pred CceeeeecccHHHHHHhHHhhcccHHHHHHHHHHHHH------HH----hcCcccCCCeee-------------------
Confidence 4788999999999999999999999999999877632 22 558899865332
Q ss_pred CCCCCCccCCCChHHHHHHHHHHHHHHhCCHhHHHhhhcHHHHHHHHH-HHHhC-------C--CCCCC---cee-----
Q 006488 272 GEAAIGRVAPVDSGLWWIILLRAYGKCSGDLSVQERVDVQTGIKMILK-LCLAD-------G--FDMFP---TLL----- 333 (643)
Q Consensus 272 Ge~a~~~ygsVDAtLWwIial~~Y~~~TGD~afl~~l~~~p~i~~iL~-w~l~~-------g--f~~~~---~lL----- 333 (643)
|-+=-..+.+..++++|++.|+|.+|+.+. .+.+..=++ |.... + +..|. .+.
T Consensus 232 -------Yl~RSQPPllt~Mv~~~y~~t~~~~~~~~~--l~tl~kEy~fw~~~~~~~~~~~~~~l~~y~~~~~~prPEsy 302 (600)
T KOG0602|consen 232 -------YLNRSQPPLLTGMVYEYYEATNDEQFLKRA--LPTLIKEYEFWTNNRTEDVKDEGKVLSRYRVMGSGPRPESY 302 (600)
T ss_pred -------eeccCCCchhhhhHHHhhhccCcHHHHHHH--HHHHhhheecccCCCccccccCCceeEEEeccCCCCCCcch
Confidence 222223466888999999999999998876 666665555 32211 1 10000 000
Q ss_pred -------------------ecC-------CC----cccccccCCCC------CchhhHHHHHHHHHHHHhhcCCCCCCHH
Q 006488 334 -------------------VTD-------GS----CMIDRRMGIHG------HPLEIQALFYSALLSAREMLTPEDGSAD 377 (643)
Q Consensus 334 -------------------v~d-------G~----~w~D~r~~r~G------~pVEIQALwY~AL~~aaeLa~~~~g~~~ 377 (643)
..+ |. -|+-.+....+ .||-.|+|+.+.++.++.+... .|+.+
T Consensus 303 ~~d~e~~e~~~t~~~~~~~~~~l~~~aesg~DfSsrw~~~~~t~~~~~t~~~vpvDLN~~~~~~~~i~~y~~~~-~Gd~~ 381 (600)
T KOG0602|consen 303 REDFETAEHLKTEKEKQQLYQDLAAAAESGWDFSSRWFAVNGTLSSIGTTDLVPVDLNLLYKWNADIMKYFYVV-DGDPK 381 (600)
T ss_pred HHHHHHHhcccchHHHHHHHHHHhhcCcccchhHHHhhccCCcccccccccccccchHHHHHhhHHHHhhhccc-CCChh
Confidence 000 11 12211110111 5799999999999999999886 57778
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhchhhhhhhhhccccchhhhhhcccCCCCCCCCccccccccCCCceeeecccCCccCcc
Q 006488 378 LIRALNNRLVALSFHIREYYWIDMKKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEFMPHIGGYLIGNLQPAHMDFR 457 (643)
Q Consensus 378 ~a~~l~~ra~~Lk~~~~~~FW~d~~~l~~iyr~~~e~y~~~a~~~~n~~pdsip~~l~~f~~~~ggYL~~~v~p~~~d~r 457 (643)
.+..+++++++++..|++.+|++..+..-.| .++ +.... +
T Consensus 382 ~s~~~~~k~~~r~~~i~~vlWde~~g~w~DY--d~~-------------------------------------~~~~~-~ 421 (600)
T KOG0602|consen 382 DSAQFEKKSEQRRAAIQEVLWDEEDGAWFDY--DLE-------------------------------------LKKHN-T 421 (600)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCCCcceec--ccc-------------------------------------ccccC-C
Confidence 8999999999999999999999887654333 222 00000 1
Q ss_pred cccccchhhHhcCCCCHHHHH----HHHHHHHHhHHHhhc-cCCCcccCCCcCCCCceeecCCCCCCCCCccccCCCccc
Q 006488 458 FFSLGNLWSVVSSLATVDQSH----AILDLIEAKWAELVA-DMPLKICYPALEGQEWRIITGSDPKNTPWSYHNGGSWPT 532 (643)
Q Consensus 458 ~~slGN~LAL~sglld~eqa~----~Vv~~l~~~w~~L~t-p~gLR~l~P~~~~~~wr~~~~gd~~~~P~sYHNG~VWP~ 532 (643)
-+...|+.+++.++.++.+.. .|++.++.. .+++ |-|+ +.+.+ ..-+-|-|=| +||=
T Consensus 422 ~~~~sn~~Pl~~~~~~~~~~~~~~~~v~~~le~~--g~~~~p~gi-------------P~Sl~-~s~eQWD~Pn--~WaP 483 (600)
T KOG0602|consen 422 YFYASNFAPLWAGCYPAPDDDKSVDKVLDYLEKS--GALTFPGGI-------------PTSLS-NSGEQWDFPN--GWAP 483 (600)
T ss_pred CcCchhhhhhhccCCCcccccchHHHHHHHHHHc--CCcCCCCCC-------------cccCC-CchhhccCCC--CCCc
Confidence 234468889999998855444 455555431 2111 1112 12222 2223445555 5999
Q ss_pred hHHHHHHHHHHcC---CHHHHHHHHHHH----HHHh-cCCCCCccccCCC--CCCCCCC---CCccchHHHHHHHHHHHH
Q 006488 533 LLWQLTVACIKMN---RVEIAEKAVKLA----ERHI-SGDKWPEYYDTKR--GRFIGKQ---SRLYQTWSIAGYLVAKLL 599 (643)
Q Consensus 533 l~~~~a~Al~k~G---~~~~A~~ll~~~----~~~l-~~~~~pE~FDG~~--g~p~G~~---Ac~~QAWSaA~~L~a~~l 599 (643)
...+++.++.++| ..+.|.++...- ...+ ...+..|-||-.. +.+.|++ -...++|+.|.+|....-
T Consensus 484 ~q~m~~~gl~~~~~~~~~~~A~kla~~wl~~~~~~~~~~g~~~EKY~vt~~~~~~G~ggEY~~QeGFGW~Ng~il~~L~~ 563 (600)
T KOG0602|consen 484 NQHMAIEGLRRAGNQELQEVALKLAQRWLETNFAVFVDSGGMFEKYDVTRDPGPHGGGGEYEVQEGFGWTNGVILDLLKK 563 (600)
T ss_pred ceehhhhhhhhcCCHHHHHHHHHHHHHHHHHhhhhhcccCceeEeeccccCCCCCCCCCccccccCCCccchhHHHHHHH
Confidence 9999999999999 455666655322 2222 3455799998543 2222222 346899999999988877
Q ss_pred hcCCCCc--ccccccc
Q 006488 600 LDNPAAA--KVLVTEE 613 (643)
Q Consensus 600 L~~P~~~--~~~~~~~ 613 (643)
..+.-.. +...+++
T Consensus 564 ~g~~~~~~~a~~~c~~ 579 (600)
T KOG0602|consen 564 YGSDLRRGEACCACDE 579 (600)
T ss_pred cCCcccccchhhccCC
Confidence 7755544 4444444
No 26
>PF00723 Glyco_hydro_15: Glycosyl hydrolases family 15; InterPro: IPR011613 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 15 GH15 from CAZY comprises enzymes with several known activities; glucoamylase (3.2.1.3 from EC); alpha-glucosidase (3.2.1.20 from EC); glucodextranase (3.2.1.70 from EC). Glucoamylase (GA) catalyses the release of D-glucose from the non-reducing ends of starch and other oligo- or poly-saccharides. Studies of fungal GA have indicated 3 closely-clustered acidic residues that play a role in the catalytic mechanism []. This region is also conserved in a recently sequenced bacterial GA []. The 3D structure of the pseudo-tetrasaccharide acarbose complexed with glucoamylase II(471) from Aspergillus awamori var. X100 has been determined to 2.4A resolution []. The protein belongs to the mainly-alpha class, and contains 19 helices and 9 strands. This protein is found in higher organisms, and is represented by phosphorylase kinase subunits.; GO: 0004339 glucan 1,4-alpha-glucosidase activity, 0005976 polysaccharide metabolic process; PDB: 1GAI_A 1GAH_A 1LF6_B 1LF9_A 3EQA_A 1AYX_A 2F6D_A 2FBA_A 1DOG_A 1GLM_A ....
Probab=98.58 E-value=4.6e-06 Score=92.52 Aligned_cols=185 Identities=17% Similarity=0.101 Sum_probs=103.2
Q ss_pred ceeeeccCCCCccccCCCccccchhHHHHHHhhccCChHHH---------------HHHHHHHHhhhhccccccCCCCCC
Q 006488 178 VGTIAANDPNDSTILNYDQVFIRDFIPSGIAFLLKGEYDIV---------------RNFILHTLQLQSWEKTMDCHSPGQ 242 (643)
Q Consensus 178 ~G~~Aa~d~~~a~~~~Y~~vfGRDt~Isalg~L~~G~peia---------------R~~L~~~l~LQ~~e~~ld~~q~~~ 242 (643)
.|.++|..+ ...|.|.-+|.||+.+++.+++..|..+.+ +++|.....+|+........+
T Consensus 23 ~GaiiAsps--~s~pdY~y~W~RD~a~~~~al~~~g~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~--- 97 (448)
T PF00723_consen 23 TGAIIASPS--TSLPDYRYCWVRDAAYTAYALWALGYRDEARAFFYELEQSLVKLMRGYLQPMYRQQGKVNPSGEFQ--- 97 (448)
T ss_dssp TT-B-S-SS--BSSSBTCSEEHHHHHHHHHHHHHHT-H--HHHHHTTT-HHHHHHHHHHHHHHHHHHTS-BTTB-TT---
T ss_pred CCeEEeecc--cCCCCCceeecccHHHHHHHHHHhhhhHHHHHHHhhhhHhhhhhhhhhhhhhhhhcCccCCCcccc---
Confidence 566665322 235799999999999999998755533222 334444455555311111111
Q ss_pred CCCCCccccccccCCCCCCCcccccCCCCCCCCCCccCCCChHHHHHHHHHHHHHHhCCHhHHHhhhcHHH--HHHHHHH
Q 006488 243 GLMPASFKVRTVPLDGDDSATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLSVQERVDVQTG--IKMILKL 320 (643)
Q Consensus 243 GliP~~fKi~~~~~r~~~~~~~~~l~pd~Ge~a~~~ygsVDAtLWwIial~~Y~~~TGD~afl~~l~~~p~--i~~iL~w 320 (643)
.|. .+|.|- ....-.+..|..+ +.--..|.+-.+++++.+|.+ .| ..+.... ++. |+..+++
T Consensus 98 --~~~---~L~~~~------~~~~~~~~~g~~~-w~~~Q~D~~gl~l~~l~~~~~-~g-~~~~~~~--~~~~~I~~~~~y 161 (448)
T PF00723_consen 98 --SPE---GLHEPG------YNVSGPVRVGNPA-WGRPQNDGPGLRLLALWQYID-SG-LQIIYTY--WEVSFIKNDLDY 161 (448)
T ss_dssp --TTG---GGGTTE------EETTSEBTTS-B--ES--BTHHHHHHHHHHHHHHH-TT-HHHHHTH--HHHHTHHHHHHH
T ss_pred --Ccc---ccccce------ecCCCCcccCchh-ccCcCCCchHHHHHHHHHHHH-cC-CCccccc--chhHHHHHHHHH
Confidence 110 112110 0000001112211 111268999999999999933 23 5555554 777 9999999
Q ss_pred HHhCCCCCCCceeecCCCcccccccCCCCCchh--hHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 006488 321 CLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLE--IQALFYSALLSAREMLTPEDGSADLIRALNNRLVALSFHIRE 395 (643)
Q Consensus 321 ~l~~gf~~~~~lLv~dG~~w~D~r~~r~G~pVE--IQALwY~AL~~aaeLa~~~~g~~~~a~~l~~ra~~Lk~~~~~ 395 (643)
+... .-.++-.-|= .+.|..-. ..+.-+.||..++.++.. .++...++.+.+.+..++..+..
T Consensus 162 i~~~-------w~~pd~dlWE----e~~g~~~f~~S~~~~~~AL~~a~~~a~~-~g~~~~~~~~~~~a~~i~~~l~~ 226 (448)
T PF00723_consen 162 IERN-------WREPDFDLWE----ERNGIHFFTASSAMQWAALLRAANLAEL-FGDPGDAERWRETADEIRERLEG 226 (448)
T ss_dssp HHHH-------TTSBEE-TTS----S-EEEEHH--HHHHHHHHHHHHHHHHHH-TT-HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHH-------cCCcCCcccc----ccCCCCccchhHHHHHHHHHHHHHHHHH-cCCchHHHHHHHHHHHHHHHhhh
Confidence 9852 1112222243 23444444 777889999999999987 46677788899899999988843
No 27
>COG4354 Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism]
Probab=98.28 E-value=5.6e-05 Score=84.95 Aligned_cols=220 Identities=17% Similarity=0.184 Sum_probs=133.2
Q ss_pred CChHHHHHHHHHHHHHHhCCHhHHHhhhcHHHHHHHHHHHHhCCCCCCCcee-ecCCC---cccccccCCCCCchhhHHH
Q 006488 282 VDSGLWWIILLRAYGKCSGDLSVQERVDVQTGIKMILKLCLADGFDMFPTLL-VTDGS---CMIDRRMGIHGHPLEIQAL 357 (643)
Q Consensus 282 VDAtLWwIial~~Y~~~TGD~afl~~l~~~p~i~~iL~w~l~~gf~~~~~lL-v~dG~---~w~D~r~~r~G~pVEIQAL 357 (643)
.|-.+=||.+++.|.+.|+|.+|+++ |+|.|..+|+|+.+- +....++ -+.|. +.-+. -..|+..+.-.|
T Consensus 441 kDlgp~fVLlvYrdf~~T~D~eFL~e--~y~~iv~~iD~~~~~--d~d~DgiP~~~g~~d~~fDa~--~i~G~ssy~~sl 514 (721)
T COG4354 441 KDLGPDFVLLVYRDFKFTNDREFLKE--VYPVIVEAIDWLKRF--DQDNDGIPENSGAMDNTFDAT--RIQGHSSYCGSL 514 (721)
T ss_pred hhcCCcEEeeehhhhhhcccHHHHHH--HHHHHHHHHHHHHhh--cccCCCCCcccCCcccccccc--eeechhhhhhHH
Confidence 34455589999999999999999997 499999999999631 1111111 11121 11112 247899999999
Q ss_pred HHHHHHHHHhhcCCCCCCH----------HHHHHHHHHHHHHHHHHHHHhhhchhhhhhhhhccccchhhhhhcccCCCC
Q 006488 358 FYSALLSAREMLTPEDGSA----------DLIRALNNRLVALSFHIREYYWIDMKKLNEIYRYKTEEYSYDAVNKFNIYP 427 (643)
Q Consensus 358 wY~AL~~aaeLa~~~~g~~----------~~a~~l~~ra~~Lk~~~~~~FW~d~~~l~~iyr~~~e~y~~~a~~~~n~~p 427 (643)
|..||-++.+|+..+.... .....+...+...++.||++.|.
T Consensus 515 ~iaal~A~l~is~~l~~~~~~~a~~e~~~~~~~~y~~~L~~~~e~~~~~LwN---------------------------- 566 (721)
T COG4354 515 FIAALIAALEISKYLLDNAQLEALNEASKNYVDFYNTWLKEAREAFNKYLWN---------------------------- 566 (721)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccC----------------------------
Confidence 9999999999988654331 12333444555555555555553
Q ss_pred CCCCccccccccCCCceeee-cccCCc-cCcccccccchhhH---hcCCCCHHHHHHHHHHHHHhHHHhh---ccCCCcc
Q 006488 428 DQIPPWLVEFMPHIGGYLIG-NLQPAH-MDFRFFSLGNLWSV---VSSLATVDQSHAILDLIEAKWAELV---ADMPLKI 499 (643)
Q Consensus 428 dsip~~l~~f~~~~ggYL~~-~v~p~~-~d~r~~slGN~LAL---~sglld~eqa~~Vv~~l~~~w~~L~---tp~gLR~ 499 (643)
...|.+. +++-.. +..+ ..|.+.+- +-.+++.++++++++.|- +|- ++++..-
T Consensus 567 -------------GkYy~lws~~~~~s~lAsQ--L~Gqfy~~LLgLpdivdhd~~ksal~sIy----~lnf~~~~~~~~n 627 (721)
T COG4354 567 -------------GKYYILWSNSGNDSVLASQ--LCGQFYATLLGLPDIVDHDKIKSALESIY----DLNFNASEYCAAN 627 (721)
T ss_pred -------------ceeEecccccCchhhhHHH--HHhHHHHHHcCCCcccchHHHHHHHHHHH----hhccccccccccC
Confidence 2222221 111100 0000 11322222 335689999999999886 332 1222211
Q ss_pred cCCCcCCCCceeecCCCCCCCCCccccCCCccchHHHHHHHHHHcCCHHHHHHHHHHHHHHhcCCC
Q 006488 500 CYPALEGQEWRIITGSDPKNTPWSYHNGGSWPTLLWQLTVACIKMNRVEIAEKAVKLAERHISGDK 565 (643)
Q Consensus 500 l~P~~~~~~wr~~~~gd~~~~P~sYHNG~VWP~l~~~~a~Al~k~G~~~~A~~ll~~~~~~l~~~~ 565 (643)
.. +-.|.| -+|.+-|-=++||=++-.+++-+.++|..+++-++.+..-+++-..+
T Consensus 628 ~v----------~~dgsp-~n~~svq~~s~W~gi~F~laa~m~~~Gm~de~~~~~e~~w~~l~~ng 682 (721)
T COG4354 628 GV----------RPDGSP-VNPLSVQPLSVWPGINFALAAHMIQMGMKDEGFELAENVWNQLKNNG 682 (721)
T ss_pred cc----------CCCCCc-CCcccccccccccchHHHHHHHHHHhcchhhhhHHHHHHHHHHHhCC
Confidence 10 111222 35678899999999999999999999998877777666655554444
No 28
>PF06824 DUF1237: Protein of unknown function (DUF1237); InterPro: IPR008313 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.; PDB: 2P0V_B 3QSP_B 3QPF_A 3QRY_A 3ON6_A 3QT9_A 3QT3_A 2NVP_A 3P2C_B.
Probab=98.06 E-value=3.6e-05 Score=84.78 Aligned_cols=342 Identities=16% Similarity=0.156 Sum_probs=178.9
Q ss_pred cCCcceeeeccCCCCccccCCCccccchhHHHHHHhh--ccCChHHHHHHHHHHHhhhhccccccCCC----CC--CCCC
Q 006488 174 CGNPVGTIAANDPNDSTILNYDQVFIRDFIPSGIAFL--LKGEYDIVRNFILHTLQLQSWEKTMDCHS----PG--QGLM 245 (643)
Q Consensus 174 ~~~p~G~~Aa~d~~~a~~~~Y~~vfGRDt~Isalg~L--~~G~peiaR~~L~~~l~LQ~~e~~ld~~q----~~--~Gli 245 (643)
...+.-||...| =+.-|-||+.-.+.-.| +..++++ +..++..+..|..-=..|+|. +. .|+-
T Consensus 29 ~~~~~tFViTGD--------IpAmWLRDS~~Q~~pYl~l~~~d~~l-~~li~G~I~rQa~~I~~dPYaNAF~~~~~s~~~ 99 (424)
T PF06824_consen 29 DEDPDTFVITGD--------IPAMWLRDSAAQLRPYLPLAKEDPSL-ARLIRGVINRQARYILIDPYANAFNPPPESGIP 99 (424)
T ss_dssp TSTSEEEE-SBS--------SSSEEHHHHHHHCGGGGGGGCC-HHH-HHHHHHHHHHHHHHHHH-TT-SEEESS-----T
T ss_pred CCCCCeEEEecC--------chhhhccccHhHHHHHHHHhcCCHHH-HHHHHHHHHHHHHHHhcchhhcccCCccccccc
Confidence 345555666522 23789999998877654 4545544 556777888887544445553 11 1222
Q ss_pred CCccccccccCCCCCCCcccccCCCC-CCCCCCccCCCChHHHHHHHHHHHHHHhCCHhHHHhhhcHHHHHHHHHHHHhC
Q 006488 246 PASFKVRTVPLDGDDSATEEVLDPDF-GEAAIGRVAPVDSGLWWIILLRAYGKCSGDLSVQERVDVQTGIKMILKLCLAD 324 (643)
Q Consensus 246 P~~fKi~~~~~r~~~~~~~~~l~pd~-Ge~a~~~ygsVDAtLWwIial~~Y~~~TGD~afl~~l~~~p~i~~iL~w~l~~ 324 (643)
|+.- .+ ...+...+.+ +...+.+--.+||--.+|.+.+.|++.|||.+|..+. ...+++.|++-+..+
T Consensus 100 ~~~~--~~--------~~~D~~~~~~~~~~v~ErKyElDSL~~~l~La~~y~~~Tgd~~~f~~~-~~~A~~~il~~~~~e 168 (424)
T PF06824_consen 100 PNGN--GH--------WQSDTTEMPYDPPWVWERKYELDSLCYFLQLAYQYWKATGDTSFFDED-WLRAVRLILDTWRTE 168 (424)
T ss_dssp SS-T--SG--------CCGSBS------TTEEE----HHHHHHHHHHHHHHHHHH--GTTSSHH-HHHHHHHHHHHHHHT
T ss_pred cccc--CC--------CCCCccCCCcCCCceeeecchhhhhhHHHHHHHHHHHhhCChhhhhHH-HHHHHHHHHHHHHHH
Confidence 2210 00 0011111211 0111223338999999999999999999999987663 588888888888742
Q ss_pred C---CCCCCce-----------------eecC---------CCcccccc----cCCCCCchhhHHHHHHHHHHHHhhcCC
Q 006488 325 G---FDMFPTL-----------------LVTD---------GSCMIDRR----MGIHGHPLEIQALFYSALLSAREMLTP 371 (643)
Q Consensus 325 g---f~~~~~l-----------------Lv~d---------G~~w~D~r----~~r~G~pVEIQALwY~AL~~aaeLa~~ 371 (643)
. |++.... |.++ |..|-.-| .-..|+.|--|+++.-+|+.+++|+..
T Consensus 169 q~~t~~~~~~~~~s~Y~F~R~~~~~tdtl~~~G~G~pv~~tGli~S~FRPSDDa~~y~yliPsNm~a~v~L~~laei~~~ 248 (424)
T PF06824_consen 169 QRPTYDEDHEGLPSPYRFQRPTCRPTDTLPNDGRGNPVAYTGLIWSGFRPSDDACIYPYLIPSNMFAVVALEYLAEILRA 248 (424)
T ss_dssp TG------SSSCS-S---BESBSSGGGS-HHHHT-S----SSS-B-SB-TTSSB-SSSEEHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhhccccccCCCcceeeccCCCCCccccCCCcCCcCCCCCceecCcCCCCcchhcCcCChHHHHHHHHHHHHHHHHHH
Confidence 1 1111100 1111 22332111 135778899999999999999999986
Q ss_pred CCCCH--HHHHHHHHHHHHHHHHHHHHhhhchhhhhhhhhccccchhhhhhcccCCCCCCCCccccccccCCCceeeecc
Q 006488 372 EDGSA--DLIRALNNRLVALSFHIREYYWIDMKKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEFMPHIGGYLIGNL 449 (643)
Q Consensus 372 ~~g~~--~~a~~l~~ra~~Lk~~~~~~FW~d~~~l~~iyr~~~e~y~~~a~~~~n~~pdsip~~l~~f~~~~ggYL~~~v 449 (643)
+..+. +.+++.++.+..|+..|.+|.=++....-.+|+|+.+-|+ ++++
T Consensus 249 ~~~~~~~~la~~~~~la~eI~~gI~~~giv~h~~~g~iyAYEVDG~G--------------------------~~~~--- 299 (424)
T PF06824_consen 249 LGWDDSAELAERARALADEIRAGIEKHGIVEHPKFGKIYAYEVDGFG--------------------------NHLL--- 299 (424)
T ss_dssp TT-THHHHHHHHHHHHHHHHHHHHHHHSEEEETTTEEEE-SEE-SSS---------------------------EE----
T ss_pred hccchHHHHHHHHHHHHHHHHHHHHHheEEeCCCCCeEEEEEecCCC--------------------------Cccc---
Confidence 55444 5777777777888888888887665555556666555443 1111
Q ss_pred cCCccCcccccccchhhH-hcCCCC--HHHHHHHHHHHHHhHHHhhccCCCcccCCCcCCCCceeecCCCCCCCCCcccc
Q 006488 450 QPAHMDFRFFSLGNLWSV-VSSLAT--VDQSHAILDLIEAKWAELVADMPLKICYPALEGQEWRIITGSDPKNTPWSYHN 526 (643)
Q Consensus 450 ~p~~~d~r~~slGN~LAL-~sglld--~eqa~~Vv~~l~~~w~~L~tp~gLR~l~P~~~~~~wr~~~~gd~~~~P~sYHN 526 (643)
||- -+++++|++ ..|-++ ++-=+.-.+.|. +|.- .+ -++.|....--.|=|=
T Consensus 300 ----mDD--ANvPSLLSlPylGf~~~~DpvYqnTR~~iL---------------S~~~-NP---yy~~G~~~~GiGsPHt 354 (424)
T PF06824_consen 300 ----MDD--ANVPSLLSLPYLGFCSKDDPVYQNTRRFIL---------------SPEG-NP---YYFSGKAASGIGSPHT 354 (424)
T ss_dssp ---------SSSS-STTHHHHTSS-TT-HHHHHHHHHHT---------------STT--ST---TEEEESSEEEE--TTT
T ss_pred ----cCC--CCCchHhhhhhcCCCCCCcHHHHHHHHHHh---------------CCCC-CC---ccccCCCcCCCCCCCC
Confidence 221 134666766 355543 333333333333 2310 11 1122222222223488
Q ss_pred CCCccchHHHHHHHHHHcCCHHHHHHHHHHHHHHhcCCC-CCccccCCCCCCCCCCCCccchHHHHHH
Q 006488 527 GGSWPTLLWQLTVACIKMNRVEIAEKAVKLAERHISGDK-WPEYYDTKRGRFIGKQSRLYQTWSIAGY 593 (643)
Q Consensus 527 G~VWP~l~~~~a~Al~k~G~~~~A~~ll~~~~~~l~~~~-~pE~FDG~~g~p~G~~Ac~~QAWSaA~~ 593 (643)
|.-++|.+++++.++-- ...++..+.|..+.+--...+ .-|=||.+++.-. .+..+||+-+.|
T Consensus 355 ~~~~iWPmsl~~~~lTs-~d~~Ei~~~L~~L~~t~~gtGlmHES~d~~~~~~~---TR~WFaWaNslF 418 (424)
T PF06824_consen 355 PPGYIWPMSLAMQGLTS-DDDEEIRECLRMLKRTTAGTGLMHESFDVDDPSKF---TRPWFAWANSLF 418 (424)
T ss_dssp -TTEEEHHHHHHHHHT--S-HHHHHHHHHHHHHTSTTSSS--SEEETTEEEEE---E-S-BHHHHHHH
T ss_pred CCCCccHHHHHHHHhcC-CCHHHHHHHHHHHHhccCCCCceeccccCCCCccc---CcHHHHHHHHHH
Confidence 88878888888888643 345566666666655334444 4899998774222 245999987764
No 29
>COG3538 Uncharacterized conserved protein [Function unknown]
Probab=97.40 E-value=0.011 Score=63.78 Aligned_cols=184 Identities=19% Similarity=0.166 Sum_probs=107.8
Q ss_pred ccccchhHHHHHHhh-ccCChHHHHHHHHHHHhhhhccccccCCCCCCCCCCCccccccccCCCCCCCcccccCCCCCCC
Q 006488 196 QVFIRDFIPSGIAFL-LKGEYDIVRNFILHTLQLQSWEKTMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDFGEA 274 (643)
Q Consensus 196 ~vfGRDt~Isalg~L-~~G~peiaR~~L~~~l~LQ~~e~~ld~~q~~~GliP~~fKi~~~~~r~~~~~~~~~l~pd~Ge~ 274 (643)
..|.||+.-.+.-.| ...+.+..|..+..+.+.|..=--.|+|. +.+.+....-.|. ....+..|--+|
T Consensus 60 AmWLRDStaQvrPYL~lAkeD~~l~~li~GlvkrQ~~~i~~DPYA--NAFn~~~n~~Ghq-------~D~T~m~~~vwE- 129 (434)
T COG3538 60 AMWLRDSTAQVRPYLPLAKEDEELRRLIAGLVKRQARYILLDPYA--NAFNETANGAGHQ-------TDHTEMNPWVWE- 129 (434)
T ss_pred HHHHhcchhhhccceeecccCHHHHHHHHHHHHHHHHHhhcChhh--hhcccccccCCcc-------cCcccccchhhe-
Confidence 689999998887654 33345555667778888887443344442 1111221111121 001122221222
Q ss_pred CCCccCCCChHHHHHHHHHHHHHHhCCHh-HHHhhhcHHHHHHHHHHHHh-CCCCC-C------------Ccee------
Q 006488 275 AIGRVAPVDSGLWWIILLRAYGKCSGDLS-VQERVDVQTGIKMILKLCLA-DGFDM-F------------PTLL------ 333 (643)
Q Consensus 275 a~~~ygsVDAtLWwIial~~Y~~~TGD~a-fl~~l~~~p~i~~iL~w~l~-~gf~~-~------------~~lL------ 333 (643)
+--.+|+--..|.+.+.|++.|||.+ |-+.+ ...++.|++.... +.+.. . .+|.
T Consensus 130 ---RKYEiDSLCYPiqLAYl~wk~Tg~t~~Fde~f--~~a~~~il~~~~~eQ~h~~~spY~F~R~t~r~~dTL~~~G~G~ 204 (434)
T COG3538 130 ---RKYEIDSLCYPIQLAYLYWKATGDTSQFDEDF--RQAVETILRVWKVEQDHETDSPYRFERDTDRKSDTLGRAGKGA 204 (434)
T ss_pred ---eeeeccchhhHHHHHHHHHHhcCCccccCHHH--HHHHHHHHHHHhHhhccCCCCCeeeeccccccchhhhhCCCCC
Confidence 33489999999999999999999987 43433 7778888887752 22211 0 1111
Q ss_pred --ecCCCccccccc----CCCCCchhhHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHH
Q 006488 334 --VTDGSCMIDRRM----GIHGHPLEIQALFYSALLSAREMLTPEDGSADLIRALNNRLVALSFHIR 394 (643)
Q Consensus 334 --v~dG~~w~D~r~----~r~G~pVEIQALwY~AL~~aaeLa~~~~g~~~~a~~l~~ra~~Lk~~~~ 394 (643)
.+.|.+|---|- =..||.|=-|....-.|..+.+|+..+.++.+.+++..+.+.++.+-|.
T Consensus 205 ~~a~tGM~wSgFRPSDDAC~YgYliPsNmFaVVvl~y~~ei~~~~~~~~~~a~~a~~L~~eIq~Gi~ 271 (434)
T COG3538 205 PTAPTGMTWSGFRPSDDACEYGYLIPSNMFAVVVLSYLQEILEALPHDAEIARQAKELANEIQQGIE 271 (434)
T ss_pred CcCcccceecCcCCCccchhcccccccchhhhhhHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHH
Confidence 122334532111 2467888889999999999999998656667665544444444444443
No 30
>KOG2119 consensus Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism]
Probab=96.27 E-value=0.12 Score=60.31 Aligned_cols=235 Identities=18% Similarity=0.242 Sum_probs=135.9
Q ss_pred HHHhCCHhHHHhhhcHHHHHHHHHHHHhCCCCCCCceee-cCCCccccccc---CCCCCchhhHHHHHHHHHHHHhhcCC
Q 006488 296 GKCSGDLSVQERVDVQTGIKMILKLCLADGFDMFPTLLV-TDGSCMIDRRM---GIHGHPLEIQALFYSALLSAREMLTP 371 (643)
Q Consensus 296 ~~~TGD~afl~~l~~~p~i~~iL~w~l~~gf~~~~~lLv-~dG~~w~D~r~---~r~G~pVEIQALwY~AL~~aaeLa~~ 371 (643)
+..|||..|++.. +|.+..|+++++. ||....+++ |+| +.|-.+ ...|...+--+||..||+.|.+||..
T Consensus 570 ~~~tgd~~flk~~--wpsv~~ime~l~~--fDKD~DGmIEN~G--fpDQTYD~W~~tGvSAYCGgLWlAALqa~~amA~~ 643 (879)
T KOG2119|consen 570 YVATGDEKFLKAV--WPSVYAIMEYLEQ--FDKDNDGMIENEG--FPDQTYDAWSMTGVSAYCGGLWLAALQAASAMARQ 643 (879)
T ss_pred eEEeccHHHHHHH--HHHHHHHHHHHHh--hcccCCcccccCC--CCCccccceEEecchhhhhHHHHHHHHHHHHHHHH
Confidence 4468999999976 9999999998875 344333433 444 122111 12567788899999999999999997
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhhhccccchhhhhhcccCCCCCCCCccccccccCCCceeeeccc-
Q 006488 372 EDGSADLIRALNNRLVALSFHIREYYWIDMKKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEFMPHIGGYLIGNLQ- 450 (643)
Q Consensus 372 ~~g~~~~a~~l~~ra~~Lk~~~~~~FW~d~~~l~~iyr~~~e~y~~~a~~~~n~~pdsip~~l~~f~~~~ggYL~~~v~- 450 (643)
. |+++....+.++++.-+..+.+.+|... .| -+++..
T Consensus 644 ~-g~~~~~~~f~~klekak~~ye~kLWNGs-----Yf------------------------------------nyD~s~s 681 (879)
T KOG2119|consen 644 I-GDPNTQDYFNNKLEKAKDVYEKKLWNGS-----YF------------------------------------NYDESSS 681 (879)
T ss_pred h-CChhHHHHHHHHHHHHHHHHHHhhcCCc-----ee------------------------------------ccccCCC
Confidence 4 6676677788888877777888888631 01 111111
Q ss_pred CCccCcccccccchhhH----hcCCCCHHHHHHHHHHHHHhHHHhhccCCCcccCCCcCCCCceeecCCCCCC--CCCcc
Q 006488 451 PAHMDFRFFSLGNLWSV----VSSLATVDQSHAILDLIEAKWAELVADMPLKICYPALEGQEWRIITGSDPKN--TPWSY 524 (643)
Q Consensus 451 p~~~d~r~~slGN~LAL----~sglld~eqa~~Vv~~l~~~w~~L~tp~gLR~l~P~~~~~~wr~~~~gd~~~--~P~sY 524 (643)
|...----|-+...+.+ +-.|.+++..++.+++|.. +. -|..+ +..-+..-|-.|.- ..-+-
T Consensus 682 ~~s~sImaDQlaGqWy~~a~gl~~i~~~~~vrsAL~tIy~----~N-Vm~~~-------~G~~GAVNGm~p~G~VD~ssi 749 (879)
T KOG2119|consen 682 GSSSSIMADQLAGQWYARACGLPPIFPEEKVRSALDTIYD----FN-VMKFK-------GGRMGAVNGMLPSGKVDTSSI 749 (879)
T ss_pred CcchhhHHHhHhhHHHHHhcCCCccCchHHHHHHHHHHHh----hc-eeeec-------CCceeccccccCCCccccccc
Confidence 11000001222222211 2236899999999999974 21 11111 10000011111111 12233
Q ss_pred ccCCCccchHHHHHHHHHHcCCHHHHHHHHHHHHHHh-cCC--C--C--CccccCCC-CCCCCCCCCccchHHHH
Q 006488 525 HNGGSWPTLLWQLTVACIKMNRVEIAEKAVKLAERHI-SGD--K--W--PEYYDTKR-GRFIGKQSRLYQTWSIA 591 (643)
Q Consensus 525 HNG~VWP~l~~~~a~Al~k~G~~~~A~~ll~~~~~~l-~~~--~--~--pE~FDG~~-g~p~G~~Ac~~QAWSaA 591 (643)
.---||+=+...+++-++.-|..+.+-+...++.+.+ .+- + | ||-+.... .+-.++- +..--|+.-
T Consensus 750 QS~EvW~GvtYalAAtMIqeG~~e~~FqTA~G~y~~~w~~~glg~~FqTPEa~~~~~~yRsl~YM-RPLsIWamQ 823 (879)
T KOG2119|consen 750 QSREVWAGVTYALAATMIQEGLVEKGFQTASGIYEAIWSETGLGYAFQTPEAWYMEDEYRSLGYM-RPLAIWAMQ 823 (879)
T ss_pred eehhhhccHHHHHHHHHHHHhhHHhhhhhhhhhHHHHhhhcccceEEECchhhhcchhhhhhhhc-chhHHHHHH
Confidence 4456999999999999999998888888877665433 222 2 2 88776643 3433432 224455443
No 31
>PF03632 Glyco_hydro_65m: Glycosyl hydrolase family 65 central catalytic domain; InterPro: IPR005195 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The family of glycosyl hydrolases (GH65 from CAZY) which contains this domain includes vacuolar acid trehalase and maltose phosphorylase. Maltose phosphorylase (MP) is a dimeric enzyme that catalyzes the conversion of maltose and inorganic phosphate into beta-D-glucose-1-phosphate and glucose. The central domain is the catalytic domain, which binds a phosphate ion that is proximal the the highly conserved Glu. The arrangement of the phosphate and the glutamate is thought to cause nucelophilic attack on the anomeric carbon atom []. The catalytic domain also forms the majority of the dimerisation interface.; GO: 0003824 catalytic activity, 0005975 carbohydrate metabolic process; PDB: 1H54_A.
Probab=86.95 E-value=2.5 Score=46.71 Aligned_cols=158 Identities=13% Similarity=0.005 Sum_probs=72.6
Q ss_pred cCCCccccchh-HHHHHHhhccCChHHHHHHHHHHH-hhhhccccccCCCCCCC-CCCCccccccccCCCCCCCcccccC
Q 006488 192 LNYDQVFIRDF-IPSGIAFLLKGEYDIVRNFILHTL-QLQSWEKTMDCHSPGQG-LMPASFKVRTVPLDGDDSATEEVLD 268 (643)
Q Consensus 192 ~~Y~~vfGRDt-~Isalg~L~~G~peiaR~~L~~~l-~LQ~~e~~ld~~q~~~G-liP~~fKi~~~~~r~~~~~~~~~l~ 268 (643)
..|..-.==|+ +...|.++.+ .||+||+.|..=. .|....+. ++..--+| +.|++-
T Consensus 28 e~Y~Gh~FWDtE~~~~P~~~~~-~Pe~Ar~lL~YR~~~L~~Ar~~-A~~~g~~GA~yPWeS------------------- 86 (370)
T PF03632_consen 28 EGYKGHVFWDTEIFMLPFFLLT-HPEAARSLLNYRYRTLPQAREN-AREYGYKGAMYPWES------------------- 86 (370)
T ss_dssp STTTTSB-THHHHCHHHHHHHS--HHHHHHHHHHHHTTHHHHHHH-HHCTT--S----SSB-------------------
T ss_pred CCcCCeeeecchHHhcchHhhc-CHHHHHHHHHHHHHHHHHHHHH-HHHcCCCcceeeccc-------------------
Confidence 46774333565 4445566665 7999999886322 11111111 11111224 667642
Q ss_pred CCCCCCCCC--c--cCCCChHHHHHHHHHHHHHHhCCHhHHHhhhcHHHHHHHHHHHHh-CCCCCCCceeecCCCccccc
Q 006488 269 PDFGEAAIG--R--VAPVDSGLWWIILLRAYGKCSGDLSVQERVDVQTGIKMILKLCLA-DGFDMFPTLLVTDGSCMIDR 343 (643)
Q Consensus 269 pd~Ge~a~~--~--ygsVDAtLWwIial~~Y~~~TGD~afl~~l~~~p~i~~iL~w~l~-~gf~~~~~lLv~dG~~w~D~ 343 (643)
..+|+..-+ . .-.+=-+.--..++++|+..|||.+|+++. -.+-|..+-++..+ -.++.......-. ..|++
T Consensus 87 ~~~G~E~t~~~~~~~~e~Hi~adIa~a~~~Y~~~TgD~~~l~~~-g~eil~etArfw~sr~~~~~~~g~y~i~--~V~GP 163 (370)
T PF03632_consen 87 ARTGEECTGPWPAGDYEIHINADIAYAIWQYYQATGDEEFLREY-GAEILFETARFWASRVEYNEDTGRYEIR--NVTGP 163 (370)
T ss_dssp SS-SSB----HHHHTT-THHHHHHHHHHHHHHHHH---TTTTTH-HHHHHHHHHHHHHHH-EEETTTTEEE----SB--S
T ss_pred ccCccccCCCCCchHhhhcchHHHHHHHHHHHHhCCcHHHHHcc-CHHHHHHHHHHHHHheEEcCCCCeEEec--ccCch
Confidence 111211000 0 111223455677899999999999998874 35555555555543 1122210111000 11111
Q ss_pred c-c-CCCCCchhhHHHHHHHHHHHHhhcCCCC
Q 006488 344 R-M-GIHGHPLEIQALFYSALLSAREMLTPED 373 (643)
Q Consensus 344 r-~-~r~G~pVEIQALwY~AL~~aaeLa~~~~ 373 (643)
+ + ..--....+|++.-..|+.|.+++..++
T Consensus 164 DEY~~~V~NnayTN~ma~~~L~~A~~~~~~~~ 195 (370)
T PF03632_consen 164 DEYHENVDNNAYTNAMAKWNLRLAAEAAERLG 195 (370)
T ss_dssp STTS-SBS--HHHHHHHHHHHHHHHHHHTTS-
T ss_pred hcccCCCCCcHHHHHHHHHHHHHHHHHHHHCc
Confidence 1 0 0111358999999999999999999753
No 32
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid. Catalytic mechanism is believed to be via nucleotide elimination and readdition and is ATP modulated. AGE is structurally and mechanistically distinct from the other four types of epimerases. The AGE domain monomer is composed of an alpha(6)/alpha(6)-barrel, the structure of which is also found in glucoamylase and cellulase. The active form is a homodimer. The alignment also contains subtype III mannose 6-phosphate isomerases.
Probab=84.49 E-value=56 Score=35.15 Aligned_cols=97 Identities=12% Similarity=-0.075 Sum_probs=59.7
Q ss_pred HHHHHHHHHHHHHHhCCHhHHHhhhcHHHHHHHHHHHHhCCCCCCCceeecCCCccc-ccccCCCCCchhhHHHHHHHHH
Q 006488 285 GLWWIILLRAYGKCSGDLSVQERVDVQTGIKMILKLCLADGFDMFPTLLVTDGSCMI-DRRMGIHGHPLEIQALFYSALL 363 (643)
Q Consensus 285 tLWwIial~~Y~~~TGD~afl~~l~~~p~i~~iL~w~l~~gf~~~~~lLv~dG~~w~-D~r~~r~G~pVEIQALwY~AL~ 363 (643)
.-=.|.++..+++.+||.++++ ..+.+++++...-.+...+++.. ++- |.+....++-++.|++...||.
T Consensus 55 ~ar~i~~~a~a~~~~~~~~~l~------~A~~~~~fl~~~~~d~~~Gg~~~---~~~~~g~~~~~~~~l~~~a~~l~ala 125 (384)
T cd00249 55 QARQVYCFAVAYLLGWRPEWLE------AAEHGLEYLDRHGRDPDHGGWYF---ALDQDGRPVDATKDLYSHAFALLAAA 125 (384)
T ss_pred ecHHHHHHHHHHHhcCChhHHH------HHHHHHHHHHHhCcCCCCCCEEE---EEcCCCCCcccccchHHHHHHHHHHH
Confidence 3346888888999999988743 36777778775322221111110 000 1111223445999999998888
Q ss_pred HHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHhh
Q 006488 364 SAREMLTPEDGSADLIRALNNRLVALSFHIREYYW 398 (643)
Q Consensus 364 ~aaeLa~~~~g~~~~a~~l~~ra~~Lk~~~~~~FW 398 (643)
.+.+.. ++++ +.+.|..+-..+.++||
T Consensus 126 ~~~~at----~d~~----~l~~A~~~~~~l~~~~~ 152 (384)
T cd00249 126 QAAKVG----GDPE----ARALAEETIDLLERRFW 152 (384)
T ss_pred HHHHhc----CCHH----HHHHHHHHHHHHHHHhc
Confidence 777654 3343 55567777778888998
No 33
>COG1331 Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones]
Probab=76.28 E-value=81 Score=37.69 Aligned_cols=100 Identities=13% Similarity=0.056 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHhCCHhHHHhhhcHHHHHHHHHHHHhCC-CCCCCceeec--CCCcccccccCCCCCchhhHHHHHHHHHH
Q 006488 288 WIILLRAYGKCSGDLSVQERVDVQTGIKMILKLCLADG-FDMFPTLLVT--DGSCMIDRRMGIHGHPLEIQALFYSALLS 364 (643)
Q Consensus 288 wIial~~Y~~~TGD~afl~~l~~~p~i~~iL~w~l~~g-f~~~~~lLv~--dG~~w~D~r~~r~G~pVEIQALwY~AL~~ 364 (643)
.+..+-.|...|||..- ...+..-|+-|...| ||.-..++.. -...|.. |.--+-+++||+.-.++..
T Consensus 214 ~l~~Llr~~~~~~d~~~------~~~~~~TL~~ma~GGIyDhlgGGF~RYStD~~Wlv---PHFEKMLyDnA~l~~~y~~ 284 (667)
T COG1331 214 LLLFLLRYSLRTGDERA------LDMVLRTLDAMARGGIYDHLGGGFFRYSTDREWLV---PHFEKMLYDNALLLRAYAE 284 (667)
T ss_pred HHHHHHHHHHhhCCHHH------HHHHHHHHHHHHccCCccccCCceeeeecCCceec---hhHHHHHHHHHHHHHHHHH
Confidence 45555566666999643 334667777776544 4433334321 1235763 4445679999998888776
Q ss_pred HHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhchhhh
Q 006488 365 AREMLTPEDGSADLIRALNNRLVALSFHIREYYWIDMKKL 404 (643)
Q Consensus 365 aaeLa~~~~g~~~~a~~l~~ra~~Lk~~~~~~FW~d~~~l 404 (643)
|-.+. ++.. +++.++.+-..+.+..|.++.++
T Consensus 285 ay~~t----gd~~----y~~~a~~i~~~l~rel~sp~ggF 316 (667)
T COG1331 285 AYRAT----GDDL----YRRAAEGILDYLLRELYSPEGGF 316 (667)
T ss_pred HHHHh----CCHH----HHHHHHHHHHHHHHHhcCCCCce
Confidence 66553 4444 45556666667777777766554
No 34
>COG1331 Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones]
Probab=59.37 E-value=3.9e+02 Score=32.24 Aligned_cols=45 Identities=18% Similarity=0.134 Sum_probs=33.1
Q ss_pred CCCCCCCccccCCCccchHHHHHHHHHHcCC-------HHHHHHHHHHHHHHh
Q 006488 516 DPKNTPWSYHNGGSWPTLLWQLTVACIKMNR-------VEIAEKAVKLAERHI 561 (643)
Q Consensus 516 d~~~~P~sYHNG~VWP~l~~~~a~Al~k~G~-------~~~A~~ll~~~~~~l 561 (643)
+.--+|..++.|.+ |--|+.++.+|.+.+. .+.|++++..+...+
T Consensus 520 ~l~ir~~~~~D~a~-~S~na~~~~~L~~Ls~ltg~~~y~e~A~~~L~a~~~~~ 571 (667)
T COG1331 520 DLLIRPKEPTDGAT-PSGNAVAAQALLRLSLLTGDARYLEAAEDILQAFAGLA 571 (667)
T ss_pred ccccCCCCCCCCCC-CCHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHH
Confidence 33447888999988 8899999999999533 466777776554444
No 35
>PRK13807 maltose phosphorylase; Provisional
Probab=58.87 E-value=1.3e+02 Score=36.60 Aligned_cols=77 Identities=16% Similarity=0.048 Sum_probs=45.3
Q ss_pred HHHHHHHHHHhCCHhHHHhhhcHHHHHHHHHHHH-hCCCCCCCceeecCCCcccccccC---CC---CCchhhHHHHHHH
Q 006488 289 IILLRAYGKCSGDLSVQERVDVQTGIKMILKLCL-ADGFDMFPTLLVTDGSCMIDRRMG---IH---GHPLEIQALFYSA 361 (643)
Q Consensus 289 Iial~~Y~~~TGD~afl~~l~~~p~i~~iL~w~l-~~gf~~~~~lLv~dG~~w~D~r~~---r~---G~pVEIQALwY~A 361 (643)
..++++|+..|||.+|+++. -.+-|..+-++.. .-.|+... |..-++.-|| -+ -...++|++.-..
T Consensus 431 aya~~~Y~~~TgD~~fl~~~-G~e~l~etArfw~s~~~~~~~~------~~y~I~~V~GPDEY~~~vdNNayTN~ma~~~ 503 (756)
T PRK13807 431 AYAIYNYTNYTGDESYLKEE-GLEVLVEIARFWADRVHFSKRK------NKYMIHGVTGPNEYENNVNNNWYTNYIAAWT 503 (756)
T ss_pred HHHHHHHHHHhCCHHHHHhc-CHHHHHHHHHHHHHheEEeCCC------CeEEECCcccccccCCCCCCchhHHHHHHHH
Confidence 47889999999999999874 2333333333333 22121111 1111211111 11 1347999999999
Q ss_pred HHHHHhhcCCC
Q 006488 362 LLSAREMLTPE 372 (643)
Q Consensus 362 L~~aaeLa~~~ 372 (643)
|+.|.+++..+
T Consensus 504 l~~A~~~~~~l 514 (756)
T PRK13807 504 LEYTLENLDKV 514 (756)
T ss_pred HHHHHHHHHHh
Confidence 99999998754
No 36
>COG1554 ATH1 Trehalose and maltose hydrolases (possible phosphorylases) [Carbohydrate transport and metabolism]
Probab=44.40 E-value=3.7e+02 Score=32.99 Aligned_cols=77 Identities=16% Similarity=0.005 Sum_probs=45.4
Q ss_pred HHHHHHHHHHhCCHhHHHhhhcHHHHHHHHHHHHhCCCCCCCceeecCCCcccccccC---CCC---CchhhHHHHHHHH
Q 006488 289 IILLRAYGKCSGDLSVQERVDVQTGIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMG---IHG---HPLEIQALFYSAL 362 (643)
Q Consensus 289 Iial~~Y~~~TGD~afl~~l~~~p~i~~iL~w~l~~gf~~~~~lLv~dG~~w~D~r~~---r~G---~pVEIQALwY~AL 362 (643)
-.+++.|+..|||.++++...+---++.+.=|.-.-.|+..... .+++.-+| -+. .-..+|.+.=.-|
T Consensus 440 AyAv~~Y~q~TgD~~yl~~~G~evl~etArFW~srv~~~~~~~~------y~I~gV~GPdEY~~~InNN~fTN~ma~w~L 513 (772)
T COG1554 440 AYAVWNYWQVTGDDSYLADCGLEVLLETARFWASRVHFSDRNGR------YEIHGVTGPDEYHNHVNNNAFTNLMAAWNL 513 (772)
T ss_pred HHHHHHHHhhcCcHHHHHhcCHHHHHHHHHHHHHHheecccCCe------EEEecCcCchhhhccccchHHHHHHHHHHH
Confidence 45789999999999999875333334555555543222222222 22222121 111 2368888888888
Q ss_pred HHHHhhcCC
Q 006488 363 LSAREMLTP 371 (643)
Q Consensus 363 ~~aaeLa~~ 371 (643)
..|.++++.
T Consensus 514 ~~ale~~~~ 522 (772)
T COG1554 514 EYALEILEW 522 (772)
T ss_pred HHHHHHHHH
Confidence 888887763
No 37
>PF07221 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); InterPro: IPR010819 N-acylglucosamine 2-epimerase (AGE, 5.3.1.8 from EC) reversibly converts N-acyl-D-glucosamine to N-acyl-D-mannosamine, the latter ultimately being converted to cytidine 5'- monophospho-N-acetylneuraminic acid, which is used as a precursor for the synthesis of connective tissues, blood cells and cellular macromolecules. AGE is a renin-binding protein (RnBP), which might act as a cellular rennin inhibitor. AGE functions as a homodimer, where monomer has an alpha(6)/alpha(6)-barrel structure commonly found in glucoamylases and cellulases []. This family contains a number of eukaryotic and bacterial AGE enzymes.; GO: 0004476 mannose-6-phosphate isomerase activity, 0006013 mannose metabolic process; PDB: 1FP3_B 2RGK_B 3GT5_A 2GZ6_B 2ZBL_E 2AFA_A.
Probab=38.20 E-value=3.2e+02 Score=29.19 Aligned_cols=97 Identities=11% Similarity=-0.014 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHHHhCCHhHHHhhhcHHHHHHHHHHHHhCCCCCCCceeecC-CCcccccccCCCCCchhhHHHHHHHHHH
Q 006488 286 LWWIILLRAYGKCSGDLSVQERVDVQTGIKMILKLCLADGFDMFPTLLVTD-GSCMIDRRMGIHGHPLEIQALFYSALLS 364 (643)
Q Consensus 286 LWwIial~~Y~~~TGD~afl~~l~~~p~i~~iL~w~l~~gf~~~~~lLv~d-G~~w~D~r~~r~G~pVEIQALwY~AL~~ 364 (643)
..-|.++.+ ++.|||.+.++. ++++++++...-.+....+.... ..+|... .....+.....|+..
T Consensus 84 af~l~ala~-~~~tg~~~~~~~------A~~~~~~l~~~~~d~~~g~~~~~~~~~~~~~------r~~n~~mhl~eA~l~ 150 (346)
T PF07221_consen 84 AFALLALAE-ARATGDPEALEL------AEQTLEFLERRFWDPEGGGYRESFDPDWSPP------RGQNPHMHLLEAFLA 150 (346)
T ss_dssp HHHHHHHHH-HHCTT-TTHHHH------HHHHHHHHHHHTEETTTTEE--EETTTSSCB------EEHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-HHHhCChhHHHH------HHHHHHHHHHHhcccccCcceeccCCccccC------CCCChhHHHHHHHHH
Confidence 355667677 688999976433 56667777642111111121110 1111111 114555566666655
Q ss_pred HHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhchhh
Q 006488 365 AREMLTPEDGSADLIRALNNRLVALSFHIREYYWIDMKK 403 (643)
Q Consensus 365 aaeLa~~~~g~~~~a~~l~~ra~~Lk~~~~~~FW~d~~~ 403 (643)
+.++.. + ..+.+++..|...|..+|+.+..+
T Consensus 151 l~~~~~----~----~~~~~~a~~l~~~~~~~f~~~~~g 181 (346)
T PF07221_consen 151 LYEATG----D----PRYLDRAEELLDLFLDRFADPESG 181 (346)
T ss_dssp HHHHHH----H----HHHHHHHHHHHHHHHTTCHHCCTT
T ss_pred HHHhcc----C----HHHHHHHHHHHHHHHHHHHHhccC
Confidence 554432 2 237778888888999999875544
No 38
>PF07721 TPR_4: Tetratricopeptide repeat; InterPro: IPR011717 This entry includes tetratricopeptide-like repeats not detected by the IPR001440 from INTERPRO, IPR013105 from INTERPRO and IPR011716 from INTERPRO models. The tetratricopeptide repeat (TPR) motif is a protein-protein interaction module found in multiple copies in a number of functionally different proteins that facilitates specific interactions with a partner protein(s) [].; GO: 0042802 identical protein binding
Probab=29.49 E-value=86 Score=21.04 Aligned_cols=25 Identities=20% Similarity=0.246 Sum_probs=21.1
Q ss_pred cchHHHHHHHHHHcCCHHHHHHHHH
Q 006488 531 PTLLWQLTVACIKMNRVEIAEKAVK 555 (643)
Q Consensus 531 P~l~~~~a~Al~k~G~~~~A~~ll~ 555 (643)
|+....++.++.+.|+.++|+++++
T Consensus 1 ~~a~~~la~~~~~~G~~~eA~~~l~ 25 (26)
T PF07721_consen 1 PRARLALARALLAQGDPDEAERLLR 25 (26)
T ss_pred CHHHHHHHHHHHHcCCHHHHHHHHh
Confidence 5667788899999999999998864
No 39
>cd02892 SQCY_1 Squalene cyclase (SQCY) domain subgroup 1; found in class II terpene cyclases that have an alpha 6 - alpha 6 barrel fold. Squalene cyclase (SQCY) and 2,3-oxidosqualene cyclase (OSQCY) are integral membrane proteins that catalyze a cationic cyclization cascade converting linear triterpenes to fused ring compounds. This group contains bacterial SQCY which catalyzes the convertion of squalene to hopene or diplopterol and eukaryotic OSQCY which transforms the 2,3-epoxide of squalene to compounds such as, lanosterol in mammals and fungi or, cycloartenol in plants. Deletion of a single glycine residue of Alicyclobacillus acidocaldarius SQCY alters its substrate specificity into that of eukaryotic OSQCY. Both enzymes have a second minor domain, which forms an alpha-alpha barrel that is inserted into the major domain.
Probab=28.94 E-value=9.9e+02 Score=28.34 Aligned_cols=142 Identities=18% Similarity=0.141 Sum_probs=73.6
Q ss_pred cchHHHHHHHHHHHhhccccCCcceeeeccCCCC-cc-------ccCCCccccchhHHHHHHhhccC---------ChHH
Q 006488 155 AKSVEDEAWDLLRESIVYYCGNPVGTIAANDPND-ST-------ILNYDQVFIRDFIPSGIAFLLKG---------EYDI 217 (643)
Q Consensus 155 ~~~~~~~A~~~Lr~~~v~~~~~p~G~~Aa~d~~~-a~-------~~~Y~~vfGRDt~Isalg~L~~G---------~pei 217 (643)
....+++|++-|.+..+ ..+.|......+.. .| ..+|+.+ -||..++.+++..+ ..+.
T Consensus 327 ~~~~l~ka~~wL~~~Q~---~~~~gdw~~~~~~~~~GGW~fs~~~~~~pd~--d~Ta~~l~AL~~~~~~~~~~~~~~~~~ 401 (634)
T cd02892 327 FDPALKKALDWLLESQI---LDNPGDWKVKYRHLRKGGWAFSTANQGYPDS--DDTAEALKALLRLQELPPFGEKVSRER 401 (634)
T ss_pred chHHHHHHHHHHHHHHc---CCCCCchhhhCCCCCCCCCCCCCCCCCCCCc--CchHHHHHHHHHhhccCCcchhhHHHH
Confidence 45678889998887543 13344322211110 01 1123322 38887777765332 2367
Q ss_pred HHHHHHHHHhhhhccccccCCCCCCCC--CCCccccccccCCCCCCCcccccCCCCCCCCCCccCCCChHHHHHHHHHHH
Q 006488 218 VRNFILHTLQLQSWEKTMDCHSPGQGL--MPASFKVRTVPLDGDDSATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAY 295 (643)
Q Consensus 218 aR~~L~~~l~LQ~~e~~ld~~q~~~Gl--iP~~fKi~~~~~r~~~~~~~~~l~pd~Ge~a~~~ygsVDAtLWwIial~~Y 295 (643)
++.++..++.+|.....+..|...++. +.+ .+ | ..++|.... .+.++|.|---+.++...
T Consensus 402 i~~Av~wLl~~Qn~dGgf~~y~~~~~~~~~~~--~~---p------------~e~~g~~~~-d~~~~~~Ta~~l~aL~~~ 463 (634)
T cd02892 402 LYDAVDWLLGMQNSNGGFAAFEPDNTYHWLEN--LN---P------------FEDFGDIMI-DPPYVECTGSVLEALGLF 463 (634)
T ss_pred HHHHHHHHHhccCCCCCEeeecCCCchhhHhh--cC---c------------hhhhccccc-CCCCcchHHHHHHHHHHh
Confidence 788888888877744433333211110 000 00 0 012332222 346788888888888765
Q ss_pred HHHhCCHhHHHhhhcHHHHHHHHHHHHh
Q 006488 296 GKCSGDLSVQERVDVQTGIKMILKLCLA 323 (643)
Q Consensus 296 ~~~TGD~afl~~l~~~p~i~~iL~w~l~ 323 (643)
.+...+. .+ ++.+.++++++|+.+
T Consensus 464 ~~~~~~~--r~--~i~~~i~rAv~~L~~ 487 (634)
T cd02892 464 GKLYPGH--RR--EIDPAIRRAVKYLLR 487 (634)
T ss_pred cccCcch--HH--HHHHHHHHHHHHHHH
Confidence 4322221 11 247889999999985
No 40
>PF03663 Glyco_hydro_76: Glycosyl hydrolase family 76 ; InterPro: IPR005198 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of alpha-1,6-mannanases belonging to glycoside hydrolase family 76 (GH76 from CAZY).; PDB: 3K7X_A.
Probab=23.66 E-value=4.4e+02 Score=29.01 Aligned_cols=110 Identities=15% Similarity=0.013 Sum_probs=56.7
Q ss_pred cCCCChHHHHHHHHHHHHHHhCCHhHHHhhhcHHHHHHHHHHHHhCCCCCCCceeecCCCccccc-ccCCCCCchhhHHH
Q 006488 279 VAPVDSGLWWIILLRAYGKCSGDLSVQERVDVQTGIKMILKLCLADGFDMFPTLLVTDGSCMIDR-RMGIHGHPLEIQAL 357 (643)
Q Consensus 279 ygsVDAtLWwIial~~Y~~~TGD~afl~~l~~~p~i~~iL~w~l~~gf~~~~~lLv~dG~~w~D~-r~~r~G~pVEIQAL 357 (643)
-+++=-++ ++++....++.|||...+ ...+++.+|+..-++....+++|.||..--+. .-.....-.+-|+.
T Consensus 152 Kna~sN~~-~~~laarL~~~t~~~~Yl------~~A~~~~~W~~~~~L~d~~~g~v~Dg~~~~~~c~~~~~~~~TYNqG~ 224 (370)
T PF03663_consen 152 KNAISNGP-AAQLAARLYRITGDQTYL------DWAKKIYDWMRDSGLIDPSTGLVYDGINIDGNCTNINKTKWTYNQGV 224 (370)
T ss_dssp EEHHHHHH-HHHHHHHHHHHH--HHHH------HHHHHHHHHHHH-HHB--TTS-B--EE-TTSSS-B-TT---HHHHHH
T ss_pred ccccchHH-HHHHHHHHHHhcCChHHH------HHHHHHHHHhhcceeEECCCcEEEeCCccCCCCCcCCCceechHHHH
Confidence 34443344 555555566778999764 34788999998733322344666665421110 00011233577888
Q ss_pred HHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhchh
Q 006488 358 FYSALLSAREMLTPEDGSADLIRALNNRLVALSFHIREYYWIDMK 402 (643)
Q Consensus 358 wY~AL~~aaeLa~~~~g~~~~a~~l~~ra~~Lk~~~~~~FW~d~~ 402 (643)
+..|+..+.+.-. + .. .+.++|..|.....++|+.+..
T Consensus 225 ~l~a~~~Ly~~T~---~-~~---~yl~~A~~la~~~~~~~~~~~~ 262 (370)
T PF03663_consen 225 FLGAAAYLYNATN---D-EQ---TYLDRAEKLADAAINHFFDNGD 262 (370)
T ss_dssp HHHHHHHHHHHH------H----HHHHHHHHHHHHHHHHHEETT-
T ss_pred HHHHHHHHHHhcC---C-cc---HHHHHHHHHHHHHHHHhCCCCC
Confidence 8776665555432 1 21 5777888888888888876543
No 41
>PF11199 DUF2891: Protein of unknown function (DUF2891); InterPro: IPR021365 This is a bacterial family of uncharacterised proteins.
Probab=22.74 E-value=2e+02 Score=31.70 Aligned_cols=58 Identities=17% Similarity=0.275 Sum_probs=43.9
Q ss_pred ccCCCChHHHHHHHHHHHHHHhCCHhHHHhhhcHHHHHHHHHHHHhCCCCCCCceeecCCCcccc
Q 006488 278 RVAPVDSGLWWIILLRAYGKCSGDLSVQERVDVQTGIKMILKLCLADGFDMFPTLLVTDGSCMID 342 (643)
Q Consensus 278 ~ygsVDAtLWwIial~~Y~~~TGD~afl~~l~~~p~i~~iL~w~l~~gf~~~~~lLv~dG~~w~D 342 (643)
|+|+=.-|-+=+.++.+|.+.+||.+|.+.+ .+.+.+|+..|. ..|.-.-|.|.+..-
T Consensus 154 RvGtH~NTAFaL~lalDyA~~~~d~~l~~~i-----~~~a~r~y~~D~--~cp~~~EPsG~DFLS 211 (326)
T PF11199_consen 154 RVGTHSNTAFALGLALDYARTTGDTALEELI-----VERAKRFYGKDK--DCPAHWEPSGDDFLS 211 (326)
T ss_pred cccCcccHHHHHHHHHHHHHHhCcHHHHHHH-----HHHHHHHHhccc--CCCcccCCCCccccc
Confidence 4556666888999999999999999997666 788999999763 345445566665543
No 42
>COG3459 Cellobiose phosphorylase [Carbohydrate transport and metabolism]
Probab=21.69 E-value=1.2e+02 Score=37.86 Aligned_cols=60 Identities=20% Similarity=0.379 Sum_probs=35.0
Q ss_pred chHHHHHHHHHH-------cCCHHHHHHHH---HHHHHHhcCCCC-Ccccc---CCCCCCCCCC---CC----ccchHHH
Q 006488 532 TLLWQLTVACIK-------MNRVEIAEKAV---KLAERHISGDKW-PEYYD---TKRGRFIGKQ---SR----LYQTWSI 590 (643)
Q Consensus 532 ~l~~~~a~Al~k-------~G~~~~A~~ll---~~~~~~l~~~~~-pE~FD---G~~g~p~G~~---Ac----~~QAWSa 590 (643)
|+.|+++.+|.- .+..+.+.+.. +.+.+.+..++| +|||. ++.|+|.|++ -| .+|+||+
T Consensus 758 ~lgW~l~~tlq~F~~lak~r~d~~r~~~~~~~~ea~~~~~~~~~wDg~wy~r~~~d~g~~lgs~e~~E~qI~~i~qs~sV 837 (1056)
T COG3459 758 WLGWFLALTLQTFKELAKARGDEARADTWAKHVEALREALETNGWDGEWYRRGYGDDGTPLGSPEDEECQIDSIPQSWSV 837 (1056)
T ss_pred ehhhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHhcCCCcceEEeccccCCCcccCCCCcccceeeeccchhh
Confidence 566776666533 24344444443 333344555566 77775 3457888865 12 7999998
Q ss_pred H
Q 006488 591 A 591 (643)
Q Consensus 591 A 591 (643)
=
T Consensus 838 l 838 (1056)
T COG3459 838 L 838 (1056)
T ss_pred h
Confidence 4
No 43
>PF06202 GDE_C: Amylo-alpha-1,6-glucosidase ; InterPro: IPR010401 This family includes human glycogen branching enzyme P35573 from SWISSPROT. This enzyme contains a number of distinct catalytic activities. It has been shown for the yeast homologue O93808 from SWISSPROT that mutations in this region disrupt the enzymes Amylo-alpha-1,6-glucosidase (3.2.1.33 from EC).; GO: 0004135 amylo-alpha-1,6-glucosidase activity, 0005978 glycogen biosynthetic process
Probab=21.65 E-value=1.9e+02 Score=31.91 Aligned_cols=58 Identities=17% Similarity=0.169 Sum_probs=31.1
Q ss_pred HHHHHHHHHHhhccccCCcceeeeccCCCCccccCCCccccchhHHHHHHh----h-ccCChHHHHHHHH
Q 006488 159 EDEAWDLLRESIVYYCGNPVGTIAANDPNDSTILNYDQVFIRDFIPSGIAF----L-LKGEYDIVRNFIL 223 (643)
Q Consensus 159 ~~~A~~~Lr~~~v~~~~~p~G~~Aa~d~~~a~~~~Y~~vfGRDt~Isalg~----L-~~G~peiaR~~L~ 223 (643)
.+.|.+.|.... ...-.|.++-.-.. ...+.|.+ +|+..=.+.+ + .+||.++++..+.
T Consensus 49 ~~~a~~~L~~~~---~~~~~G~ipn~~~~-~~~~~Y~s---~Dat~wfl~~l~~Y~~~t~D~~~l~~~~~ 111 (370)
T PF06202_consen 49 FEEARNILATFA---GTQRHGLIPNELRD-GEEPRYNS---VDATLWFLIALQEYYRWTGDYSFLRELYP 111 (370)
T ss_pred HHHHHHHHHHHH---HhhhcCcccCcccC-CCCCCCCC---CccHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 456666665532 11236777743211 22355653 4766554443 2 4788888876654
No 44
>PF06051 DUF928: Domain of Unknown Function (DUF928); InterPro: IPR010328 This is a family of uncharacterised bacterial proteins.
Probab=20.85 E-value=90 Score=31.37 Aligned_cols=30 Identities=17% Similarity=0.335 Sum_probs=21.2
Q ss_pred hHHHHHHHHHHHHhhcCCCCCCHHHHHHHH
Q 006488 354 IQALFYSALLSAREMLTPEDGSADLIRALN 383 (643)
Q Consensus 354 IQALwY~AL~~aaeLa~~~~g~~~~a~~l~ 383 (643)
-|++||.||...+++....-.+......+.
T Consensus 143 e~GiWyDaL~~La~lr~~~p~d~~l~~~W~ 172 (189)
T PF06051_consen 143 ENGIWYDALATLAELRRSQPNDPQLAQDWQ 172 (189)
T ss_pred HhCchHHHHHHHHHHHHcCCCChHHHHHHH
Confidence 478999999999999876444555444333
No 45
>PF13428 TPR_14: Tetratricopeptide repeat
Probab=20.32 E-value=2.2e+02 Score=21.06 Aligned_cols=31 Identities=19% Similarity=0.176 Sum_probs=24.6
Q ss_pred cchHHHHHHHHHHcCCHHHHHHHHHHHHHHh
Q 006488 531 PTLLWQLTVACIKMNRVEIAEKAVKLAERHI 561 (643)
Q Consensus 531 P~l~~~~a~Al~k~G~~~~A~~ll~~~~~~l 561 (643)
|...-.++.++.+.|+.+.|.++++.+.+..
T Consensus 1 p~~~~~la~~~~~~G~~~~A~~~~~~~l~~~ 31 (44)
T PF13428_consen 1 PAAWLALARAYRRLGQPDEAERLLRRALALD 31 (44)
T ss_pred CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHC
Confidence 4455677889999999999999998776643
Done!