Query 006488
Match_columns 643
No_of_seqs 249 out of 708
Neff 5.2
Searched_HMMs 29240
Date Tue Mar 26 02:24:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006488.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006488hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2z07_A Putative uncharacterize 100.0 3.4E-35 1.1E-39 316.0 25.3 344 156-596 2-418 (420)
2 3c68_A Uncharacterized protein 100.0 5.9E-33 2E-37 321.0 31.9 371 156-600 281-757 (761)
3 2jg0_A Periplasmic trehalase; 100.0 9.7E-33 3.3E-37 308.1 25.5 311 192-602 121-504 (535)
4 3qde_A Cellobiose phosphorylas 100.0 3.9E-30 1.3E-34 299.4 23.0 332 197-605 356-739 (811)
5 3rrs_A Cellobiose phosphorylas 100.0 6.6E-30 2.3E-34 297.7 22.0 339 197-605 363-752 (822)
6 1v7w_A Chitobiose phosphorylas 100.0 7.6E-30 2.6E-34 295.4 18.3 308 196-557 344-669 (807)
7 2okx_A Rhamnosidase B; alpha b 99.9 1.1E-22 3.6E-27 240.6 28.8 325 156-607 547-885 (956)
8 3cih_A Putative alpha-rhamnosi 99.9 3.3E-22 1.1E-26 230.4 27.4 286 195-607 338-645 (739)
9 1lf6_A Glucoamylase; (alpha/al 99.8 1.5E-19 5.1E-24 207.0 24.2 348 155-601 294-667 (684)
10 1ulv_A Glucodextranase; GH fam 99.8 3E-19 1E-23 212.2 25.8 345 156-602 283-669 (1020)
11 2fba_A Glucoamylase Glu1; (alp 99.4 4.4E-11 1.5E-15 132.5 25.7 339 175-601 46-486 (492)
12 1gai_A Glucoamylase-471; hydro 99.4 1.5E-10 5.3E-15 127.5 27.6 311 191-601 45-429 (472)
13 2p0v_A Hypothetical protein BT 99.3 5.5E-11 1.9E-15 130.5 22.6 348 169-598 86-466 (489)
14 2vn4_A Glucoamylase; hydrolase 99.3 2.6E-10 8.8E-15 129.1 28.6 332 176-601 31-434 (599)
15 3qry_B Putative uncharacterize 99.0 1.1E-08 3.9E-13 110.5 21.6 358 156-594 26-416 (426)
16 3p2c_A Putative glycosyl hydro 99.0 5.1E-09 1.7E-13 114.3 18.7 347 169-596 64-446 (463)
17 3qt9_A Putative uncharacterize 99.0 1.4E-08 4.8E-13 109.9 20.7 358 156-596 29-418 (427)
18 2rdy_A BH0842 protein; PSI-II, 92.8 0.29 1E-05 57.2 9.8 97 285-383 450-554 (803)
19 1h54_A Maltose phosphorylase; 92.4 0.38 1.3E-05 55.9 10.0 84 285-371 429-515 (754)
20 2eab_A Alpha-fucosidase; glyco 91.5 1.5 5.1E-05 52.0 13.8 85 285-372 508-597 (899)
21 2gz6_A N-acetyl-D-glucosamine 87.2 10 0.00036 39.2 15.0 101 282-400 53-154 (388)
22 2zbl_A Putative isomerase; N-a 73.2 79 0.0027 33.4 16.0 104 280-403 49-152 (421)
23 2zzr_A Unsaturated glucuronyl 73.2 99 0.0034 33.1 16.7 51 521-572 235-292 (397)
24 3gt5_A N-acetylglucosamine 2-e 70.0 75 0.0026 33.3 14.9 95 288-403 57-154 (402)
25 1fp3_A N-acyl-D-glucosamine 2- 52.1 91 0.0031 32.3 11.4 105 283-403 52-164 (402)
26 3k7x_A LIN0763 protein; Q92DQ0 41.3 1.3E+02 0.0046 31.2 10.6 103 279-398 147-250 (349)
27 1w6k_A Lanosterol synthase; cy 33.1 6.1E+02 0.021 29.1 15.4 172 154-370 353-549 (732)
28 2gz6_A N-acetyl-D-glucosamine 27.8 2.1E+02 0.007 29.3 9.3 102 281-403 113-214 (388)
29 3gt5_A N-acetylglucosamine 2-e 24.1 2.4E+02 0.008 29.5 9.0 93 288-400 253-349 (402)
30 1dl2_A Class I alpha-1,2-manno 21.0 2.9E+02 0.0098 30.6 9.2 147 154-323 122-277 (511)
31 3k7x_A LIN0763 protein; Q92DQ0 20.7 5.9E+02 0.02 26.2 11.2 80 289-400 52-131 (349)
32 2zzr_A Unsaturated glucuronyl 20.2 7.9E+02 0.027 26.0 17.5 135 157-323 134-280 (397)
No 1
>2z07_A Putative uncharacterized protein TTHA0978; uncharacterized conserved protein, structural genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=3.4e-35 Score=315.98 Aligned_cols=344 Identities=14% Similarity=0.125 Sum_probs=251.7
Q ss_pred chHHHHHHHHHHHhhccccCCcceeeeccCCCCccccCCCccccchhHHHHHHhhccCChHHHHHHHHHHHh-hhhcccc
Q 006488 156 KSVEDEAWDLLRESIVYYCGNPVGTIAANDPNDSTILNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILHTLQ-LQSWEKT 234 (643)
Q Consensus 156 ~~~~~~A~~~Lr~~~v~~~~~p~G~~Aa~d~~~a~~~~Y~~vfGRDt~Isalg~L~~G~peiaR~~L~~~l~-LQ~~e~~ 234 (643)
+++.++|+..|+. |.+..+++|+ . -+|+..|+||+.+.+++++.. +++.+++.|..++. .|
T Consensus 2 ~~l~~~a~~~l~~-----n~~~~~~vP~-----~--~~f~~~~~wDs~~~~~gl~~~-~~~~a~~~l~~~~~~~q----- 63 (420)
T 2z07_A 2 APLRTKAVEVLQR-----NSRGAFTVPA-----H--GLYPYQWLWDSAFIALGWTQV-DWERAWQELLCLFDYGQ----- 63 (420)
T ss_dssp -CHHHHHHHHHHH-----HBCSSCBCSS-----T--TCCSCEEHHHHHHHHHHHTTT-CHHHHHHHHHHHHHHHC-----
T ss_pred hHHHHHHHHHHHH-----cCCCCCcCCC-----C--CCCCCccHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHH-----
Confidence 3588999999998 5455455554 1 389999999999999998765 68888887766654 43
Q ss_pred ccCCCCCCCCCCCccccccccCCCCCCCcccccCCC-CCC-CCC-CccCCCChHHHHHHHHHHHHHHhCC----HhHHHh
Q 006488 235 MDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPD-FGE-AAI-GRVAPVDSGLWWIILLRAYGKCSGD----LSVQER 307 (643)
Q Consensus 235 ld~~q~~~GliP~~fKi~~~~~r~~~~~~~~~l~pd-~Ge-~a~-~~ygsVDAtLWwIial~~Y~~~TGD----~afl~~ 307 (643)
..+|.||+.+ -+.+.|. + +..++ .|. .+. .++.++|.++++++++++|+++||| .+|+++
T Consensus 64 -----~~~G~ip~~v--~~~~~~~---y---~p~~~~w~~~~~~~~~~~~~~qpP~~~~~~~~~~~~tgD~~~~~~~L~~ 130 (420)
T 2z07_A 64 -----GPDGMLPHIV--FHEQSRD---Y---FPGPDVWGREARAQPATSGITQPPVVATVVRYLYEKDPDRDRARERARY 130 (420)
T ss_dssp -----CTTCCCCSEE--ECCSCCC---C---C-----------CCCEECSSCCCCCHHHHHHHHHHHCSCHHHHHHHHHH
T ss_pred -----hhCCCcceec--ccCCCcc---c---CcchhhhcccccccCCCCCCcCCcHHHHHHHHHHHhCccchhHHHHHHH
Confidence 3789999743 2211110 0 00011 111 111 2457899999999999999999999 999998
Q ss_pred hhcHHHHHHHHHHHHhCCCCCCCceee------cCCC----cccccc----cC---------------------------
Q 006488 308 VDVQTGIKMILKLCLADGFDMFPTLLV------TDGS----CMIDRR----MG--------------------------- 346 (643)
Q Consensus 308 l~~~p~i~~iL~w~l~~gf~~~~~lLv------~dG~----~w~D~r----~~--------------------------- 346 (643)
+ .|.|++.++|+...+ +....+++ .+|. .|.|.. .+
T Consensus 131 ~--~p~l~~~~~~~~~~~-d~~~~Gl~~~~~~we~G~~~~~~w~~~~~~~~~~~~~~y~r~d~~~~~~~~~p~~~~~~~~ 207 (420)
T 2z07_A 131 L--FPKLLAFHRWLYHAR-DPYRTGLVVIVHPWESGMDNSPAWDKPLSRVPVENLPPYERRDVKHVNPEERPRKEDYDRY 207 (420)
T ss_dssp H--HHHHHHHHHHHHHHH-CTTCCSCCCBSSGGGGTCTTCGGGHHHHHTCCC-----------CCSCC-------CHHHH
T ss_pred H--HHHHHHHHHHHhcCC-CCCCCCceeeecCCCcCCCCCccccccccccCCCCcchhhhhhhhccccccCCcHHHHHHH
Confidence 7 999999999998521 01112221 1232 344420 00
Q ss_pred ----------------------CCCCchhhHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhchhhh
Q 006488 347 ----------------------IHGHPLEIQALFYSALLSAREMLTPEDGSADLIRALNNRLVALSFHIREYYWIDMKKL 404 (643)
Q Consensus 347 ----------------------r~G~pVEIQALwY~AL~~aaeLa~~~~g~~~~a~~l~~ra~~Lk~~~~~~FW~d~~~l 404 (643)
..+.||++||++|.+++.+++|++.++.+ ++++.++++.+++.|++ ||+++++.
T Consensus 208 ~~~~~~~~esG~d~s~l~~~~~~~~~~vdlna~~~~~~~~la~la~~lg~~---a~~~~~~a~~~~~ai~~-~Wd~~~g~ 283 (420)
T 2z07_A 208 LSLLYLFRRLEYDPREIYRQSPFKVVDVGFNAILQRANRDLYALAVLLQED---PYEIEEWIVRGEVGLEA-LWDREAGF 283 (420)
T ss_dssp HHHHHHHHHTTTCHHHHHHHCSCCEECHHHHHHHHHHHHHHHHHHHHTTCC---CHHHHHHHHHHHHHHHH-TEETTTTE
T ss_pred HHHHHHHHHcCCChhhhcccCCcccCChhHHHHHHHHHHHHHHHHHHhCcc---HHHHHHHHHHHHHHHHH-hhCcccCe
Confidence 11347899999999999999999987544 67799999999999999 99877665
Q ss_pred hhhhhccccchhhhhhcccCCCCCCCCccccccccCCCceeeecccCCccCcccccccchhhHhcCCCCHHHHHHHHHHH
Q 006488 405 NEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEFMPHIGGYLIGNLQPAHMDFRFFSLGNLWSVVSSLATVDQSHAILDLI 484 (643)
Q Consensus 405 ~~iyr~~~e~y~~~a~~~~n~~pdsip~~l~~f~~~~ggYL~~~v~p~~~d~r~~slGN~LAL~sglld~eqa~~Vv~~l 484 (643)
+..|... +....+ .....+++++++|+++++++++|++.|
T Consensus 284 ~~d~~~~--------------------------------------~g~~~~--~~~~~~~~pL~~g~~~~~~a~~v~~~l 323 (420)
T 2z07_A 284 YFSWDLV--------------------------------------AGEPIA--VKTSAGFLPLFAGTPHQGRASLLAQEA 323 (420)
T ss_dssp ECCEETT--------------------------------------TTEECC--CCBGGGGTHHHHTCSCHHHHHHHHHHH
T ss_pred eEeeeCC--------------------------------------CCCeec--cccHHhHHHHHcCCCCHHHHHHHHHHH
Confidence 4322100 000001 224567889999999999999999998
Q ss_pred HHhHHHhh--ccCCCcccCCCcCCCCceeecCCCCCCCCCccccCCCccchHHHHHHHHHHcCCHHHHHHHHHHHHHHhc
Q 006488 485 EAKWAELV--ADMPLKICYPALEGQEWRIITGSDPKNTPWSYHNGGSWPTLLWQLTVACIKMNRVEIAEKAVKLAERHIS 562 (643)
Q Consensus 485 ~~~w~~L~--tp~gLR~l~P~~~~~~wr~~~~gd~~~~P~sYHNG~VWP~l~~~~a~Al~k~G~~~~A~~ll~~~~~~l~ 562 (643)
. +++ +++||+++.| +++.++|.+||||+|||+++++++.||.++|+.++|.+++......+.
T Consensus 324 ~----~~~~~~~~gi~t~~~------------~~~~y~~~~yw~gpvW~~~~~~~~~gL~~~G~~~~A~~l~~~~~~~~~ 387 (420)
T 2z07_A 324 E----RWGEKARYLLPSVDP------------TSPFFEPGRYWRGPVWINVNWMVAEGFRDYGFAALAARLKADALALME 387 (420)
T ss_dssp H----HHTTTCSSSCBSBCT------------TSTTCCTTSTTSSCBCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred H----HHhccCCCCcCcCCC------------cCcccCCcCCCCCCcchhHHHHHHHHHHHcCCHHHHHHHHHHHHHHHh
Confidence 5 677 8999999877 366788999999999999999999999999999999999876666555
Q ss_pred CCCCCccccCCCCCCCCCCCCccchHHHHHHHHH
Q 006488 563 GDKWPEYYDTKRGRFIGKQSRLYQTWSIAGYLVA 596 (643)
Q Consensus 563 ~~~~pE~FDG~~g~p~G~~Ac~~QAWSaA~~L~a 596 (643)
..++.|.||+.+|.|.|+. +|+||+|.+|.+
T Consensus 388 ~~~~~E~yd~~~g~~~g~~---~fgWs~~~~l~l 418 (420)
T 2z07_A 388 REGFREYYDPLTGQGRGGE---GFSWSAALALFW 418 (420)
T ss_dssp HHCSEEEECTTTCCEEEEE---SCHHHHHHHHHH
T ss_pred cCCeeeeeCCCCCCcCCCC---CCchHHHHHHHH
Confidence 5788999999998887755 999999998765
No 2
>3c68_A Uncharacterized protein YGJK; GH63, processing alpha-glucosidase, alpha/alpha barrel, hydrolase; HET: BMA; 1.50A {Escherichia coli} PDB: 3c67_A* 2ds3_A* 3c69_A* 3d3i_A
Probab=100.00 E-value=5.9e-33 Score=320.95 Aligned_cols=371 Identities=16% Similarity=0.107 Sum_probs=262.1
Q ss_pred chHHHHHHHHHHHhhccccCCcceeeeccC--CCCccccCCCc--cccchhHHHHHHhhccCChHHHHHHHHHHHhhhhc
Q 006488 156 KSVEDEAWDLLRESIVYYCGNPVGTIAAND--PNDSTILNYDQ--VFIRDFIPSGIAFLLKGEYDIVRNFILHTLQLQSW 231 (643)
Q Consensus 156 ~~~~~~A~~~Lr~~~v~~~~~p~G~~Aa~d--~~~a~~~~Y~~--vfGRDt~Isalg~L~~G~peiaR~~L~~~l~LQ~~ 231 (643)
+++..+|+..|+... ..+.|.++... |+ ++.+||.. +|+||+.+.+++++. .+++++|+.|+.++.+|.+
T Consensus 281 ~~l~~~a~~tL~~n~----~~~~g~v~~~~v~P~-~g~~wF~~~~~w~wDs~~~a~gL~~-~~~elAr~~L~~l~~~Q~~ 354 (761)
T 3c68_A 281 TRVAVKAIETLNGNW----RSPGGAVKFNTVTPS-VTGRWFSGNQTWPWDTWKQAFAMAH-FNPDIAKENIRAVFSWQIQ 354 (761)
T ss_dssp HHHHHHHHHHHHHTE----ECCBTTBCSCEECSC-TTCTTTCTTCBCHHHHHHHHHHHTT-TCHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHhc----cCccCcCCCCeEEec-CCCCCCCcCCeeccHHHHHHHHHHH-cCHHHHHHHHHHHHHhhhh
Confidence 478888888888743 22344443211 11 56789998 999999999998764 4899999999999887752
Q ss_pred cccccCCCC-CCCCCCCccccccccCCCCCCCcccccCC-CCCCCCCCccCCCChHHHHHHHHHHHHHHhCCHhHHHhhh
Q 006488 232 EKTMDCHSP-GQGLMPASFKVRTVPLDGDDSATEEVLDP-DFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLSVQERVD 309 (643)
Q Consensus 232 e~~ld~~q~-~~GliP~~fKi~~~~~r~~~~~~~~~l~p-d~Ge~a~~~ygsVDAtLWwIial~~Y~~~TGD~afl~~l~ 309 (643)
+ .|..+. .+|.||+.+ .+.+ .| ++|+.+. ++.....+++|++++++|+++|||.+|++++
T Consensus 355 ~--~d~~r~~~~G~IP~~~--~~~~------------~p~r~g~~~~-~~~~~sqPPl~~~av~~yy~~tgD~~fL~e~- 416 (761)
T 3c68_A 355 P--GDSVRPQDVGFVPDLI--AWNL------------SPERGGDGGN-WNERNTKPSLAAWSVMEVYNVTQDKTWVAEM- 416 (761)
T ss_dssp T--TCSSCGGGTTCCCSBB--CSSC------------CGGGTSCCSS-CBCSCCCCCCHHHHHHHHHHHHCCHHHHHHH-
T ss_pred c--ccCCccCCCCEeeeee--ccCC------------cccccCcccc-ccCCCCCcHHHHHHHHHHHHHhCCHHHHHHH-
Confidence 2 233432 679999854 1100 01 2232222 2222334588999999999999999999987
Q ss_pred cHHHHHHHHHHHHhCC-CCCCCceeec------------CC---------------------------------------
Q 006488 310 VQTGIKMILKLCLADG-FDMFPTLLVT------------DG--------------------------------------- 337 (643)
Q Consensus 310 ~~p~i~~iL~w~l~~g-f~~~~~lLv~------------dG--------------------------------------- 337 (643)
+|.|+++++|+...+ .+. .+++. .|
T Consensus 417 -~P~L~~~~~w~~~~rd~d~--~GL~~y~~~~~~~~~~prge~~~~d~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~ 493 (761)
T 3c68_A 417 -YPKLVAYHDWWLRNRDHNG--NGVPEYGATRDKAHNTESGEMLFTVKKGDKEETQSGLNNYARVVEKGQYDSLEIPAQV 493 (761)
T ss_dssp -HHHHHHHHHHHHHHSCTTC--SSCCCCEEECCTTTBCTTSCBEEEEEETTEEEEEECHHHHHHHHHHTCSSEEECHHHH
T ss_pred -HHHHHHHHHHHHhCCCCCc--CccEEecccccccccCCCcchhccccccccchhcccccccchhccccccccchhhhhh
Confidence 999999999998532 111 11110 01
Q ss_pred ----Cccccc-------------------------------ccCCCCC---------chhhHHHHHHHHHHHHhhcCCCC
Q 006488 338 ----SCMIDR-------------------------------RMGIHGH---------PLEIQALFYSALLSAREMLTPED 373 (643)
Q Consensus 338 ----~~w~D~-------------------------------r~~r~G~---------pVEIQALwY~AL~~aaeLa~~~~ 373 (643)
.+.+|- ..+..|. +|++||+||.|++.+++|++.+
T Consensus 494 ~a~weSG~D~s~rw~~~~~~~~~~y~~~~~~~~~w~~~~~~n~~~~G~l~~~~~~~~~VdlnA~ly~al~~lA~lA~~L- 572 (761)
T 3c68_A 494 AASWESGRDDAAVFGFIDKEQLDKYVANGGKRSDWTVKFAENRSQDGTLLGYSLLQESVDQASYMYSDNHYLAEMATIL- 572 (761)
T ss_dssp HHHHHHTCTTCGGGTCCCHHHHHHHHHTTCCGGGGCCCEEEEECTTCCEEEEEESEECHHHHHHHHHHHHHHHHHHHHT-
T ss_pred hccccCCCCcchhccccccccccccccccccccchhhhhccccccccccccCcccccCHHHHHHHHHHHHHHHHHHHHh-
Confidence 011211 0022343 8999999999999999999975
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhhhccccchhhhhhcccCCCCCCCCccccccccCCCceeeecccCCc
Q 006488 374 GSADLIRALNNRLVALSFHIREYYWIDMKKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEFMPHIGGYLIGNLQPAH 453 (643)
Q Consensus 374 g~~~~a~~l~~ra~~Lk~~~~~~FW~d~~~l~~iyr~~~e~y~~~a~~~~n~~pdsip~~l~~f~~~~ggYL~~~v~p~~ 453 (643)
|+.+.++.+.++|+.|++.|+++||+++.+.+..|....+ ...+. .. +..+ ++
T Consensus 573 G~~e~A~~y~~~A~~lk~ai~~~fWd~e~G~y~D~~~~~~-----------~~~~~----------~~-g~~~----sn- 625 (761)
T 3c68_A 573 GKPEEAKRYRQLAQQLADYINTCMFDPTTQFYYDVRIEDK-----------PLANG----------CA-GKPI----VE- 625 (761)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHTEETTTTEECCEECCSS-----------CCTTS----------CS-SCBC----GG-
T ss_pred CChHHHHHHHHHHHHHHHHHHHhCcCccCCEEEEEecCCC-----------ccccc----------cc-ccee----ec-
Confidence 6677788999999999999999999987776433211100 00000 00 0000 00
Q ss_pred cCcccccccchhhHhcCCCCHHHHHHHHHHHHHhHHHhhccCCCcccCCCcCCCCceeecCCCCCCCCCccccCCCccch
Q 006488 454 MDFRFFSLGNLWSVVSSLATVDQSHAILDLIEAKWAELVADMPLKICYPALEGQEWRIITGSDPKNTPWSYHNGGSWPTL 533 (643)
Q Consensus 454 ~d~r~~slGN~LAL~sglld~eqa~~Vv~~l~~~w~~L~tp~gLR~l~P~~~~~~wr~~~~gd~~~~P~sYHNG~VWP~l 533 (643)
+.+..++++++++|+++++++++|++.|... ..+.+++|||++.|. ++.++|.+||||+|||..
T Consensus 626 ---~~~~~s~~~pL~~Gl~~~e~a~~vl~~L~~~-~~l~t~~Girtls~~------------~p~y~p~~yw~GpvW~~~ 689 (761)
T 3c68_A 626 ---RGKGPEGWSPLFNGAATQANADAVVKVMLDP-KEFNTFVPLGTAALT------------NPAFGADIYWRGRVWVDQ 689 (761)
T ss_dssp ---GCCCGGGGHHHHTTCSCHHHHHHHHHHHTCT-TTTCCSSCSCSSCTT------------CTTCCTTCTTTTCEEHHH
T ss_pred ---chhhHHHHHHHHcCCCCHHHHHHHHHHHhCh-hhhcCCCCccccCCC------------CcccCCCccccCCcccch
Confidence 1235678899999999999999999999742 257889999998872 567888999999999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHH----hcCCCCCccccCCCCCCCCCCCCccchHHHHHHHHHHHHh
Q 006488 534 LWQLTVACIKMNRVEIAEKAVKLAERH----ISGDKWPEYYDTKRGRFIGKQSRLYQTWSIAGYLVAKLLL 600 (643)
Q Consensus 534 ~~~~a~Al~k~G~~~~A~~ll~~~~~~----l~~~~~pE~FDG~~g~p~G~~Ac~~QAWSaA~~L~a~~lL 600 (643)
+|+++.||.++|+.++|.+++..+... .....++|+||+.++.|.|+. +|+||+|.+|++....
T Consensus 690 ~~lli~aL~~~G~~d~A~~l~~~~~~~~~~~~~~G~~~E~yd~~tg~p~G~~---~fgWSaa~~l~ll~~y 757 (761)
T 3c68_A 690 FWFGLKGMERYGYRDDALKLADTFFRHAKGLTADGPIQENYNPLTGAQQGAP---NFSWSAAHLYMLYNDF 757 (761)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTTTSSSCCCSEECTTTCCEESCS---SCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhCCceeeEecCCCCCcCcCC---CchHHHHHHHHHHHHH
Confidence 999999999999999999998765442 233558999999999888865 9999999988776544
No 3
>2jg0_A Periplasmic trehalase; family 37, hydrolase, inhibitor, glycoside hydrolase, glycosidase, 1-thiatrehazolin; HET: TTZ; 1.50A {Escherichia coli} SCOP: a.102.1.9 PDB: 2jf4_A* 2jjb_A* 2wyn_A*
Probab=100.00 E-value=9.7e-33 Score=308.08 Aligned_cols=311 Identities=14% Similarity=0.138 Sum_probs=236.4
Q ss_pred cCCCccccchhHHHHHHhhccCChHHHHHHHHHHHhhhhccccccCCCCCCCCCCCccccccccCCCCCCCcccccCCCC
Q 006488 192 LNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILHTLQLQSWEKTMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDF 271 (643)
Q Consensus 192 ~~Y~~vfGRDt~Isalg~L~~G~peiaR~~L~~~l~LQ~~e~~ld~~q~~~GliP~~fKi~~~~~r~~~~~~~~~l~pd~ 271 (643)
-||..+|+||+.++++|++..|.++++|++|..++.+|. ..|.||+..
T Consensus 121 g~F~~~~~WDs~f~~~gLl~~~~~~~A~~~l~~~~~~~~----------~~G~IPng~---------------------- 168 (535)
T 2jg0_A 121 GRFREVYYWDSYFTMLGLAESGHWDKVADMVANFAHEID----------TYGHIPNGN---------------------- 168 (535)
T ss_dssp TTBCSCBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH----------HHSSCCSBS----------------------
T ss_pred ccccccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhc----------cCCcccCCC----------------------
Confidence 488999999999999999988999999999999987775 568888722
Q ss_pred CCCCCCccCCCChHHHHHHHHHHHHHHhCCHhHHHhhhcHHHHHHHHHHHHhCCCCC-------------CCceeecCC-
Q 006488 272 GEAAIGRVAPVDSGLWWIILLRAYGKCSGDLSVQERVDVQTGIKMILKLCLADGFDM-------------FPTLLVTDG- 337 (643)
Q Consensus 272 Ge~a~~~ygsVDAtLWwIial~~Y~~~TGD~afl~~l~~~p~i~~iL~w~l~~gf~~-------------~~~lLv~dG- 337 (643)
..||.+++.++.|++++++|+++|+| +|++++ .|.+++.++|....+-.. ...++..-+
T Consensus 169 ----r~yY~~~sqPPl~~~~v~~~~~~~~~-~fL~~~--~p~L~~~~~ww~~~~~~~~~g~~~~~~~~~~~G~~l~~y~~ 241 (535)
T 2jg0_A 169 ----RSYYLSRSQPPFFALMVELLAQHEGD-AALKQY--LPQMQKEYAYWMDGVENLQAGQQEKRVVKLQDGTLLNRYWD 241 (535)
T ss_dssp ----BGGGTTCCCSCCHHHHHHHHHHHHTH-HHHHHH--HHHHHHHHHHHTTTCTTCCTTEEETTEEECTTSCEEECCCC
T ss_pred ----CccCCCCCCccHHHHHHHHHHHcCCH-HHHHHH--HHHHHHHHHHHHhCCcccCccccccceeecCCCCcceeecc
Confidence 13578888899999999999999986 899987 999999999987532110 011121000
Q ss_pred --------------------------Ccccccc---------cCC----CC----------CchhhHHHHHHHHHHHHhh
Q 006488 338 --------------------------SCMIDRR---------MGI----HG----------HPLEIQALFYSALLSAREM 368 (643)
Q Consensus 338 --------------------------~~w~D~r---------~~r----~G----------~pVEIQALwY~AL~~aaeL 368 (643)
.+|+|.+ .+| .| .|||+||++|+|++.+++|
T Consensus 242 ~~~~prpesyr~d~~~~~~~~~~~~~~~y~~~~~~~eSGwD~s~R~~~~~~~l~~~~t~~i~~VDlnA~ly~a~~~la~l 321 (535)
T 2jg0_A 242 DRDTPRPESWVEDIATAKSNPNRPATEIYRDLRSAAASGWDFSSRWMDNPQQLNTLRTTSIVPVDLNSLMFKMEKILARA 321 (535)
T ss_dssp SCCSCCGGGHHHHHHHHHTCTTSCHHHHHHHHHHHHHTTCCSCGGGBSSTTCGGGBCGGGEECHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCcceeehhhhhhccccchhHHHHHHHHHHHhCCCCCccccCCCCCcccccCCccchhhHHHHHHHHHHHHHHHH
Confidence 0121100 012 12 5799999999999999999
Q ss_pred cCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhhhccccchhhhhhcccCCCCCCCCccccccccCCCceeeec
Q 006488 369 LTPEDGSADLIRALNNRLVALSFHIREYYWIDMKKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEFMPHIGGYLIGN 448 (643)
Q Consensus 369 a~~~~g~~~~a~~l~~ra~~Lk~~~~~~FW~d~~~l~~iyr~~~e~y~~~a~~~~n~~pdsip~~l~~f~~~~ggYL~~~ 448 (643)
++.+ |+.+.+.++.++|+.+++.|+++||+++.+.+..|..
T Consensus 322 A~~l-G~~~~a~~~~~~A~~lk~ai~~~fWdee~G~y~D~~~-------------------------------------- 362 (535)
T 2jg0_A 322 SKAA-GDNAMANQYETLANARQKGIEKYLWNDQQGWYADYDL-------------------------------------- 362 (535)
T ss_dssp HHHH-TCHHHHHHHHHHHHHHHHHHHHHSEETTTTEECCEET--------------------------------------
T ss_pred HHHh-CChHHHHHHHHHHHHHHHHHHHhCcCCCCCEEEEEeC--------------------------------------
Confidence 9875 5667788999999999999999999987665432210
Q ss_pred ccCCccCcccccccchhhHhcCCCCHHHHHHHHHHHHHhHHHhhccCCCcccCCCcCCCCceeecCCCCCCCCCccccCC
Q 006488 449 LQPAHMDFRFFSLGNLWSVVSSLATVDQSHAILDLIEAKWAELVADMPLKICYPALEGQEWRIITGSDPKNTPWSYHNGG 528 (643)
Q Consensus 449 v~p~~~d~r~~slGN~LAL~sglld~eqa~~Vv~~l~~~w~~L~tp~gLR~l~P~~~~~~wr~~~~gd~~~~P~sYHNG~ 528 (643)
..+.. .+..+..+++++++|+++++++++|++.|.+ +|++++|||++++ ++.+||+|+
T Consensus 363 -~~~~~-~~~~~~s~~~PL~~gi~~~e~a~~v~~~l~~---~l~t~~GlrT~s~-----------------~s~~yW~Gp 420 (535)
T 2jg0_A 363 -KSHKV-RNQLTAAALFPLYVNAAAKDRANKMATATKT---HLLQPGGLNTTSV-----------------KSGQQWDAP 420 (535)
T ss_dssp -TTTEE-CCCCBGGGGHHHHTTCSCHHHHHHHHHHHHH---HTEETTEECSBSC-----------------CCSSSSSTT
T ss_pred -CCCCE-eeeehhhhHHHHhcCCCCHHHHHHHHHHHHH---HhccCCCCCCCcC-----------------CCccccCCC
Confidence 00000 0134567788999999999999999999984 8999999998653 245899999
Q ss_pred -CccchHHHHHHHHHHcCCHHHHHHHHHHHHHHh-----cCCCCCccccCCCCCCCCC----CCCccchHHHHHHHHHHH
Q 006488 529 -SWPTLLWQLTVACIKMNRVEIAEKAVKLAERHI-----SGDKWPEYYDTKRGRFIGK----QSRLYQTWSIAGYLVAKL 598 (643)
Q Consensus 529 -VWP~l~~~~a~Al~k~G~~~~A~~ll~~~~~~l-----~~~~~pE~FDG~~g~p~G~----~Ac~~QAWSaA~~L~a~~ 598 (643)
|||+++++++.||.++|+.++|.++.......+ ..+.++|+|||.++.+.|+ +.+..|+||+|.+|.+..
T Consensus 421 NvW~~~~~l~i~gL~~yG~~~~A~~la~~~l~~~~~~~~~~G~l~E~yd~~~~~~~G~ggeY~~~~~fgWT~av~l~ll~ 500 (535)
T 2jg0_A 421 NGWAPLQWVATEGLQNYGQKEVAMDISWHFLTNVQHTYDREKKLVEKYDVSTTGTGGGGGEYPLQDGFGWTNGVTLKMLD 500 (535)
T ss_dssp EECHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHSSCBSCEETTSSSCBCCCSSSCCCBSCHHHHHHHHHHHH
T ss_pred CcchhHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhccCCeeeeeECCCCCCCCCCCCCCCCCCCChhHHHHHHHHHH
Confidence 999999999999999999999988875443322 2367999999998766664 235799999999887766
Q ss_pred HhcC
Q 006488 599 LLDN 602 (643)
Q Consensus 599 lL~~ 602 (643)
...+
T Consensus 501 ~y~~ 504 (535)
T 2jg0_A 501 LICP 504 (535)
T ss_dssp HHSC
T ss_pred Hhhh
Confidence 5543
No 4
>3qde_A Cellobiose phosphorylase; cellulase, phosphate, transferase; 2.40A {Clostridium thermocellum}
Probab=99.97 E-value=3.9e-30 Score=299.36 Aligned_cols=332 Identities=17% Similarity=0.140 Sum_probs=241.3
Q ss_pred ccc-chhHHHHHHhhccCChHHHHHHHHHHHhhhhccccccCCCCCCCCCCCccccccccCCCCCCCcccccCCCC--CC
Q 006488 197 VFI-RDFIPSGIAFLLKGEYDIVRNFILHTLQLQSWEKTMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDF--GE 273 (643)
Q Consensus 197 vfG-RDt~Isalg~L~~G~peiaR~~L~~~l~LQ~~e~~ld~~q~~~GliP~~fKi~~~~~r~~~~~~~~~l~pd~--Ge 273 (643)
-|| ||.+.-+++++.. +||++|..|+.++..| ..+|.+|+.+. |.. |.
T Consensus 356 ~~G~RD~~qd~~~~~~~-~p~~~r~~il~~~~~Q----------~~dG~~~h~~~------------------p~~~~g~ 406 (811)
T 3qde_A 356 GMGFRDSNQDLLGFVHQ-IPERARERLLDLAATQ----------LEDGSAYHQYQ------------------PLTKKGN 406 (811)
T ss_dssp CEEHHHHHHHHHTTTTT-CHHHHHHHHHHHHTTB----------CTTSCBCSEEC------------------TTTCCEE
T ss_pred CCccHHHHHHHHHHHhc-CHHHHHHHHHHHHhhc----------ccCCCccceec------------------CCCCCCC
Confidence 566 9999999998754 7999999998776443 37899998651 111 21
Q ss_pred CCCCccCCCChHHHHHHHHHHHHHHhCCHhHHHhh-----------hcHHHHHHHHHHHHhCCCCCCCceeecCCCcccc
Q 006488 274 AAIGRVAPVDSGLWWIILLRAYGKCSGDLSVQERV-----------DVQTGIKMILKLCLADGFDMFPTLLVTDGSCMID 342 (643)
Q Consensus 274 ~a~~~ygsVDAtLWwIial~~Y~~~TGD~afl~~l-----------~~~p~i~~iL~w~l~~gf~~~~~lLv~dG~~w~D 342 (643)
..++ +..+|.+||+|+++++|++.|||.+|+++. .+.+++++++++++.. ++.+...+ ....||+|
T Consensus 407 ~~~~-~~~~D~~lW~i~av~~Y~~~TGD~~~L~e~~p~~~~~~~~~tl~eh~~ra~~~~~~~-~g~~GL~~-~g~~DWnD 483 (811)
T 3qde_A 407 NEIG-SNFNDDPLWLILATAAYIKETGDYSILKEQVPFNNDPSKADTMFEHLTRSFYHVVNN-LGPHGLPL-IGRADWND 483 (811)
T ss_dssp CTTC-CCBTTHHHHHHHHHHHHHHHHCCGGGGGSEEEETTEEEEEEEHHHHHHHHHHHHHTC-BCTTSSBB-CBTCSSST
T ss_pred CCCC-CCcccchhHHHHHHHHHHHHHCCHHHHHhhhhhhcCCcccccHHHHHHHHHHHHHhc-CCCCCCcc-cccCCchh
Confidence 1121 456999999999999999999999999763 3578999999998842 23332222 22347877
Q ss_pred cc--------c-----------CCCCCchhhHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhchhh
Q 006488 343 RR--------M-----------GIHGHPLEIQALFYSALLSAREMLTPEDGSADLIRALNNRLVALSFHIREYYWIDMKK 403 (643)
Q Consensus 343 ~r--------~-----------~r~G~pVEIQALwY~AL~~aaeLa~~~~g~~~~a~~l~~ra~~Lk~~~~~~FW~d~~~ 403 (643)
.- + ++.|.+|++++|||.||+.+++|++.+ ++.+.+++++++|+.|+++|+++||+. +
T Consensus 484 ~ln~~~~~~~vg~~~~~vtp~~~~~gesv~~~al~y~AL~~~a~lA~~l-Gd~~~A~~~~~~A~~lk~a~~~~~Wdg--~ 560 (811)
T 3qde_A 484 CLNLNCFSTVPDESFQTTTSKDGKVAESVMIAGMFVFIGKDYVKLCEYM-GLEEEARKAQQHIDAMKEAILKYGYDG--E 560 (811)
T ss_dssp TCCSSCCCCCTTSCTTTSCCCCCSSCEEHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHHHHHSBCS--S
T ss_pred hccccccccccCccccccccccCCcccCHHHHHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHHHHHhccCc--C
Confidence 52 1 257899999999999999999999985 667889999999999999999999964 1
Q ss_pred hhhhhhccccchhhhhhcccCCCCCCCCccccccccCCCceeee--cccCCccCcccccccchhhHhcCCCCHH-HHHHH
Q 006488 404 LNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEFMPHIGGYLIG--NLQPAHMDFRFFSLGNLWSVVSSLATVD-QSHAI 480 (643)
Q Consensus 404 l~~iyr~~~e~y~~~a~~~~n~~pdsip~~l~~f~~~~ggYL~~--~v~p~~~d~r~~slGN~LAL~sglld~e-qa~~V 480 (643)
.|. . +. -.+|. .++ ..+++ ++++.++.+++++|+++++ |++++
T Consensus 561 ~y~---r--------a~------------------~~dg~-~~gs~~~~~~----qi~~~~q~~avlsGia~~e~ra~~~ 606 (811)
T 3qde_A 561 WFL---R--------AY------------------DDFGR-KVGSKENEEG----KIFIESQGFCVMAEIGLEDGKALKA 606 (811)
T ss_dssp SBC---C--------EE------------------CTTSC-EESSTTSSSC----CEESHHHHHHHHTTCSSSSSHHHHH
T ss_pred eEE---E--------EE------------------cCCCC-CCCccCCCCc----eEEecchhHHHHhCCCCchHHHHHH
Confidence 111 0 00 00110 111 01223 4667788889999999999 99999
Q ss_pred HHHHHHhHHHhhccCCCcccCCCcCCCCceeecCCCCCCCCCccccCCCccchHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 006488 481 LDLIEAKWAELVADMPLKICYPALEGQEWRIITGSDPKNTPWSYHNGGSWPTLLWQLTVACIKMNRVEIAEKAVKLAERH 560 (643)
Q Consensus 481 v~~l~~~w~~L~tp~gLR~l~P~~~~~~wr~~~~gd~~~~P~sYHNG~VWP~l~~~~a~Al~k~G~~~~A~~ll~~~~~~ 560 (643)
++.|.+ +|++|+|||++.|++....+ -.+.-..|.|.+||||++|||.+..++.|++++|+.++|.+++..+...
T Consensus 607 m~~v~~---~L~t~~Glrll~p~f~~~~~--d~g~~~~Y~pg~~enG~iy~H~~~w~~~a~a~~G~~~~A~~~~~~l~p~ 681 (811)
T 3qde_A 607 LDSVKK---YLDTPYGLVLQNPAFTRYYI--EYGEISTYPPGYKENAGIFCHNNAWIICAETVVGRGDMAFDYYRKIAPA 681 (811)
T ss_dssp HHHHHH---HHCCTTCCCSEESCCCSCCT--TTGGGGTSCTTSTTTTCEEHHHHHHHHHHHHHTTCHHHHHHHHHHHCGG
T ss_pred HHHHHH---HhCCCcceEeecCCccccCC--CCCceeccCCCccccccccchHHHHHHHHHHHcCCHHHHHHHHHHhChh
Confidence 999985 89999999999998642211 1222345899999999999999999999999999999999999876442
Q ss_pred h------cCCCCCccccCCCC----CCCCCCCCccchHHHHHH-----HHHHHHhc-CCCC
Q 006488 561 I------SGDKWPEYYDTKRG----RFIGKQSRLYQTWSIAGY-----LVAKLLLD-NPAA 605 (643)
Q Consensus 561 l------~~~~~pE~FDG~~g----~p~G~~Ac~~QAWSaA~~-----L~a~~lL~-~P~~ 605 (643)
. ...+.||+|++... +..| |.+|+|..++. +.+..+|. .|+.
T Consensus 682 ~~~~~~~~~~~~Py~~~~~~~~~~~p~~G---r~~~~w~tGsa~w~~~~~ve~~lGl~~~~ 739 (811)
T 3qde_A 682 YIEDVSDIHKLEPYVYAQMVAGKDAKRHG---EAKNSWLTGTAAWNFVAISQWILGVKPDY 739 (811)
T ss_dssp GSGGGHHHHCSCTTSCEEEECCTTSTTTT---CEEEESCSTHHHHHHHHHHHTTSCEEEET
T ss_pred hhcchhhhcCcCcEEeccccccccCCCCC---CCcchhHHHHHHHHHHHHHHHhceeEEEC
Confidence 1 12467999988651 2334 55999966543 33344666 6654
No 5
>3rrs_A Cellobiose phosphorylase; GH94, alpha barrel, disaccharide phosphorylase, transferase; 1.70A {Cellulomonas uda} PDB: 3rsy_A* 3s4a_A* 3s4b_A* 3s4c_A* 3s4d_A* 2cqs_A* 2cqt_A* 3qfy_A* 3qfz_A* 3qg0_A* 3act_A* 3acs_A* 3afj_A*
Probab=99.97 E-value=6.6e-30 Score=297.70 Aligned_cols=339 Identities=18% Similarity=0.149 Sum_probs=241.2
Q ss_pred ccc-chhHHHHHHhhccCChHHHHHHHHHHHhhhhccccccCCCCCCCCCCCccccccccCCCCCCCcccccCCCCCCCC
Q 006488 197 VFI-RDFIPSGIAFLLKGEYDIVRNFILHTLQLQSWEKTMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDFGEAA 275 (643)
Q Consensus 197 vfG-RDt~Isalg~L~~G~peiaR~~L~~~l~LQ~~e~~ld~~q~~~GliP~~fKi~~~~~r~~~~~~~~~l~pd~Ge~a 275 (643)
-|| ||.+.-+++++.. +||++|..|+.++.. |..+|.+|+.+. |.. ..|...
T Consensus 363 ~~G~RD~~qd~~~~~~~-~pe~ar~~il~~~~~----------Q~~dG~v~h~~~----p~~------------~~g~~~ 415 (822)
T 3rrs_A 363 GMGFRDSNQDLLGFVHL-IPERARERIIDIAST----------QFADGSAYHQYQ----PLT------------KRGNND 415 (822)
T ss_dssp CEEHHHHHHHHHHHTTT-CHHHHHHHHHHHHTT----------CCTTSCCCSEEE----TTT------------TEECTT
T ss_pred CCchHHHHHHHHHHHhc-CHHHHHHHHHHHHHh----------hcccCcccceec----CcC------------CCCccC
Confidence 566 9999999998754 799999999877643 347899998652 100 012111
Q ss_pred CCccCCCChHHHHHHHHHHHHHHhCCHhHHHhh-----------hcHHHHHHHHHHHHhCCCCCCCceeecCCCcccccc
Q 006488 276 IGRVAPVDSGLWWIILLRAYGKCSGDLSVQERV-----------DVQTGIKMILKLCLADGFDMFPTLLVTDGSCMIDRR 344 (643)
Q Consensus 276 ~~~ygsVDAtLWwIial~~Y~~~TGD~afl~~l-----------~~~p~i~~iL~w~l~~gf~~~~~lLv~dG~~w~D~r 344 (643)
++ +..+|.+||+|+++++|++.|||.+|+++. .+.+++++++++++.. ++.+...+ ....||+|.-
T Consensus 416 ~~-~~~~D~~lWl~~av~~Yi~~TGD~~~L~e~~p~~~~~~~~~tl~eh~~ra~~~~~~~-~g~~GLp~-~g~gDWnD~l 492 (822)
T 3rrs_A 416 IG-SGFNDDPLWLIAGTAAYIKETGDFSILDEPVPFDNEPGSEVPLFEHLTRSFEFTVTH-RGPHGLPL-IGRADWNDCL 492 (822)
T ss_dssp TC-SCBTTHHHHHHHHHHHHHHHHCCGGGGGSEECSTTCTTCCEEHHHHHHHHHHHHHHS-BCTTSSBB-CBTCSSSTTC
T ss_pred CC-CcccchHhHHHHHHHHHHHHHCCHHHHHhhhhhhccccccccHHHHHHHHHHHHHhc-CCCCCCcc-cCCCcchhhc
Confidence 11 456999999999999999999999999763 2477999999999852 12322222 2234687742
Q ss_pred --------c-----------CCCCCchhhHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhchhhhh
Q 006488 345 --------M-----------GIHGHPLEIQALFYSALLSAREMLTPEDGSADLIRALNNRLVALSFHIREYYWIDMKKLN 405 (643)
Q Consensus 345 --------~-----------~r~G~pVEIQALwY~AL~~aaeLa~~~~g~~~~a~~l~~ra~~Lk~~~~~~FW~d~~~l~ 405 (643)
+ ++.|.+|++++|||.||+.+++|++.+ |+.+.+++++++|+.|+++|+++||+.. .+
T Consensus 493 n~~~~~~~vg~~~~~~~p~~~~~Gesv~~~al~y~AL~~~a~lA~~~-G~~~~A~~~~~~A~~lk~a~~~~~Wdg~-~y- 569 (822)
T 3rrs_A 493 NLNCFSTTPGESFQTTENQAGGVAESTFIAAQFVLYGEQYAELAARR-GLADVADRARGHVAEMRDALLTDGWDGS-WF- 569 (822)
T ss_dssp CTTCCCCSTTCCTTTCCSSCCCCCEEHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHHHTTTBCSS-SB-
T ss_pred ccccccccccccccccccccCCccccHHHHHHHHHHHHHHHHHHHHc-CChHHHHHHHHHHHHHHHHHHHhccCcc-ee-
Confidence 1 257899999999999999999999975 6677899999999999999999999641 11
Q ss_pred hhhhccccchhhhhhcccCCCCCCCCccccccccCCCceeeecccCCccCcccccccchhhHhcCCCCHH-------HHH
Q 006488 406 EIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEFMPHIGGYLIGNLQPAHMDFRFFSLGNLWSVVSSLATVD-------QSH 478 (643)
Q Consensus 406 ~iyr~~~e~y~~~a~~~~n~~pdsip~~l~~f~~~~ggYL~~~v~p~~~d~r~~slGN~LAL~sglld~e-------qa~ 478 (643)
. . +. -..|. .++. ......++++.++.+++++|+++++ |++
T Consensus 570 ~---r--------a~------------------d~dg~-~~gs--~~~~~~~i~~~~q~~avlsGia~~e~~~~~~~~a~ 617 (822)
T 3rrs_A 570 L---R--------AY------------------DYYGN-PIGT--DAHDEGKIWIEPQGFAVMAGVGVGEGPQDTDAPAI 617 (822)
T ss_dssp C---C--------EE------------------CTTSC-EESC--TTSSSCCEEHHHHHHHHHTTTTCCSSTTCTTSHHH
T ss_pred E---E--------EE------------------cCCCC-Cccc--cCCCCceEEeccchhHhhcCCCCcccccchHHHHH
Confidence 1 0 00 00110 0110 0111224667777789999999999 999
Q ss_pred HHHHHHHHhHHHhhccCCCcccCCCcCCCCceeecCCCCCCCCCccccCCCccchHHHHHHHHHHcCCHHHHHHHHHHHH
Q 006488 479 AILDLIEAKWAELVADMPLKICYPALEGQEWRIITGSDPKNTPWSYHNGGSWPTLLWQLTVACIKMNRVEIAEKAVKLAE 558 (643)
Q Consensus 479 ~Vv~~l~~~w~~L~tp~gLR~l~P~~~~~~wr~~~~gd~~~~P~sYHNG~VWP~l~~~~a~Al~k~G~~~~A~~ll~~~~ 558 (643)
++++.|.+ +|++|+|||++.|++.. ...-.+....|.|.+||||++|||.+..++.|++++|+.++|.+++..+.
T Consensus 618 ~al~~v~~---~L~t~~Girll~p~f~~--~~~~~g~~~~Y~pg~~enG~iy~H~~~w~~~a~a~~G~~~~A~~~~~~l~ 692 (822)
T 3rrs_A 618 KALDSVNE---MLATDHGMVLQYPAYTT--YQVHMGEVSTYPPGYKENGGIFCHNNPWVIIAETVVGRGGRAFDYYKRIT 692 (822)
T ss_dssp HHHHHHHH---HTEETTEEBSEESCCSS--CCTTSTTGGGSCTTBTTBTCEETTTHHHHHHHHHHHTCHHHHHHHHHHHC
T ss_pred HHHHHHHH---HcCCCCeEEEcCCCccc--ccCCCCcccccCCCccccccccccHHHHHHHHHHHcCCHHHHHHHHHHhC
Confidence 99999985 99999999999998631 12223445568999999999999999999999999999999999987653
Q ss_pred H--H----hcCCCCCccccCCCC-CCCCCCCCccchHHHHHH-----HHHHHHhc-CCCC
Q 006488 559 R--H----ISGDKWPEYYDTKRG-RFIGKQSRLYQTWSIAGY-----LVAKLLLD-NPAA 605 (643)
Q Consensus 559 ~--~----l~~~~~pE~FDG~~g-~p~G~~Ac~~QAWSaA~~-----L~a~~lL~-~P~~ 605 (643)
. + ....+.||+|++... ......+|.+|+|..++. +++..+|. .|+.
T Consensus 693 p~~~~~~~~~~~~~Py~~~~~~~~~~~p~~G~~~~~w~tGsa~w~~~~lve~~LGlr~~~ 752 (822)
T 3rrs_A 693 PAYREDISDVHRLEPYVYAQMIAGKEAVRHGEAKNSWLTGTAAWNFVTVSQYLLGVRPEY 752 (822)
T ss_dssp HHHHGGGHHHHCSCSSSCEEEECCTTSTTTTCEEEESSSTHHHHHHHHHHHTTSCEEECS
T ss_pred cccccchhHhhccCcEEEeccccccCCCCCCCccchhhhhhHHHHHHHHHHhEEeEEEEC
Confidence 2 1 123467999998652 101112356999966543 33445666 6654
No 6
>1v7w_A Chitobiose phosphorylase; beta-sandwich, (alpha/alpha)6 barrel, transferase; HET: NDG NAG; 1.60A {Vibrio proteolyticus} SCOP: a.102.1.4 b.30.5.3 PDB: 1v7v_A* 1v7x_A*
Probab=99.96 E-value=7.6e-30 Score=295.39 Aligned_cols=308 Identities=17% Similarity=0.095 Sum_probs=211.9
Q ss_pred cccc-chhHHHHHHhhccCChHHHHHHHHHHHhhhhccccccCCCCCCC-CCCCccccccccCCCCCCC-cccccCCCCC
Q 006488 196 QVFI-RDFIPSGIAFLLKGEYDIVRNFILHTLQLQSWEKTMDCHSPGQG-LMPASFKVRTVPLDGDDSA-TEEVLDPDFG 272 (643)
Q Consensus 196 ~vfG-RDt~Isalg~L~~G~peiaR~~L~~~l~LQ~~e~~ld~~q~~~G-liP~~fKi~~~~~r~~~~~-~~~~l~pd~G 272 (643)
..|| ||+++++++++ .++|+++|++|+.++..|. .+| ++|+-+...+.|-.+.... ....++++.|
T Consensus 344 ~~~G~RD~~~~~~~l~-~~~p~~ar~~l~~~~~~Q~----------~~G~~~p~~~p~~~~~~~g~~~~~~~~~~~g~~~ 412 (807)
T 1v7w_A 344 TGLGYRDTAQDAISVP-HANPEMTRKRIVDLLRGQV----------KAGYGLHLFDPDWFDPEKEDVAPSKSPTVVPTPS 412 (807)
T ss_dssp CSEEHHHHHHHTTSCT-TTCHHHHHHHHHHHHHTBC----------TTSCBCSEECGGGGCC------------------
T ss_pred CccCchHHhHHHHHHh-hcCHHHHHHHHHHHHhccc----------cCCCcceeeeeccccccccccCCccccccccCCC
Confidence 4699 99999999976 7899999999998887665 334 4454321111000000000 0000011112
Q ss_pred CCC--CC-ccCCCChHHHHHHHHHHHHHHhCCHhHHHhhhcHH-----------HHHHHHHHHHhCCCCCCCceee-cCC
Q 006488 273 EAA--IG-RVAPVDSGLWWIILLRAYGKCSGDLSVQERVDVQT-----------GIKMILKLCLADGFDMFPTLLV-TDG 337 (643)
Q Consensus 273 e~a--~~-~ygsVDAtLWwIial~~Y~~~TGD~afl~~l~~~p-----------~i~~iL~w~l~~gf~~~~~lLv-~dG 337 (643)
+.. ++ .....|+++||++++++|+++|||.+|++++ +| +++++++|+... .+. .+++ ...
T Consensus 413 ~~~~~~g~~~~~~D~~lw~~~~~~~y~~~tGD~~~L~e~--~p~~~~~~~~v~e~~~~~~~~~~~~-~~~--~GL~~~~~ 487 (807)
T 1v7w_A 413 DEDKIHGIKDTCSDDHLWLIPTICKYVMETGETSFFDQM--IPYADGGEASVYEHMKAALDFSAEY-VGQ--TGICKGLR 487 (807)
T ss_dssp ----CCCGGGCBSSGGGGHHHHHHHHHHHHCCGGGGGCE--EECTTSCEEEHHHHHHHHHHHHHHS-BCT--TSCBEEET
T ss_pred cchhhcCCCCCccchhhHHHHHHHHHHHHhCCHHHHhcc--cccccCCcchHHHHHHHHHHHHHhc-CCC--CCCcccCC
Confidence 211 11 1123499999999999999999999999986 55 699999999862 122 2222 233
Q ss_pred CcccccccCCCCCchhhHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhhhccccchhh
Q 006488 338 SCMIDRRMGIHGHPLEIQALFYSALLSAREMLTPEDGSADLIRALNNRLVALSFHIREYYWIDMKKLNEIYRYKTEEYSY 417 (643)
Q Consensus 338 ~~w~D~r~~r~G~pVEIQALwY~AL~~aaeLa~~~~g~~~~a~~l~~ra~~Lk~~~~~~FW~d~~~l~~iyr~~~e~y~~ 417 (643)
.+|.|.--+..|.++|+|+|||.||+.+++|++.+ |+.+.+++++++|++|++.|+++||+++.+.|..+ |
T Consensus 488 ~DW~D~~~~~~g~~v~~~a~~y~al~~~a~la~~l-G~~~~a~~~~~~A~~lk~~~~~~~w~~~~~~f~~~------~-- 558 (807)
T 1v7w_A 488 ADWNDCLNLGGGESSMVSFLHFWALQEFIDLAKFL-GKDQDVNTYTEMAANVREACETHLWDDEGGWYIRG------L-- 558 (807)
T ss_dssp CSSSTTCCCEEEEEHHHHHHHHHHHHHHHHHHHHH-TCHHHHHHHHHHHHHHHHHHHHHSEETTTTEECCE------E--
T ss_pred CCCCCcCCCCCCeehhHHHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHHHHHhccCCCCCeeeee------e--
Confidence 47876421127899999999999999999999875 66777899999999999999999998764432110 0
Q ss_pred hhhcccCCCCCCCCccccccccCCCceeeecccCCccCcccccccchhhHhcCCCCHHHHHHHHHHHHHhHHHhhccCCC
Q 006488 418 DAVNKFNIYPDQIPPWLVEFMPHIGGYLIGNLQPAHMDFRFFSLGNLWSVVSSLATVDQSHAILDLIEAKWAELVADMPL 497 (643)
Q Consensus 418 ~a~~~~n~~pdsip~~l~~f~~~~ggYL~~~v~p~~~d~r~~slGN~LAL~sglld~eqa~~Vv~~l~~~w~~L~tp~gL 497 (643)
+. +|.. ++. ....+.++++.+|.+|+++|+++++|++++++.|.+ +|.+++|+
T Consensus 559 --------~~-------------d~~~-~g~--~~~~~~~~~~~~~~~al~~g~~~~e~a~~~l~~v~~---~L~~~~G~ 611 (807)
T 1v7w_A 559 --------TK-------------NGDK-IGT--AQQQEGRVHLESNTLAVLSGLASQERGEQAMDAVDE---HLFSPYGL 611 (807)
T ss_dssp --------CT-------------TSCE-ESC--TTCSSCCEEHHHHHHHHHTTCSCHHHHHHHHHHHHH---HHEETTEE
T ss_pred --------cc-------------CCCC-cCC--ccCCCCcCcccchHHHHhhCCCCHHHHHHHHHHHHH---hcCCCCce
Confidence 00 0000 010 011123466778889999999999999999999985 88889999
Q ss_pred cccCCCcCCCCceeecCCCCCCCCCccccCCCccchHHHHHHHHHHcCCHHHHHHHHHHH
Q 006488 498 KICYPALEGQEWRIITGSDPKNTPWSYHNGGSWPTLLWQLTVACIKMNRVEIAEKAVKLA 557 (643)
Q Consensus 498 R~l~P~~~~~~wr~~~~gd~~~~P~sYHNG~VWP~l~~~~a~Al~k~G~~~~A~~ll~~~ 557 (643)
|+++|++... ....+.-..|.|..||||++|||.+..++.|+.++|+.++|.+++..+
T Consensus 612 ~~~~p~~~~~--~~~~g~~~~y~~~~~enG~~~~~~~~w~~~al~~~G~~d~A~~l~~~~ 669 (807)
T 1v7w_A 612 HLNAPSFSTP--NDDIGFVTRVYQGVKENGAIFSHPNPWAWVAETKLGRGDRAMKFYDAL 669 (807)
T ss_dssp CSEESCCCSC--CTTTCGGGGSCTTBTTBTSEESTTHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred eecCCccccc--CcCCceeeccCCccccccccccchHHHHHHHHHHcCCHHHHHHHHHHh
Confidence 9999976321 111122245788899999999999999999999999999999998765
No 7
>2okx_A Rhamnosidase B; alpha barrel, glycoside hydrolase family 78, I hydrolase; 1.90A {Bacillus SP}
Probab=99.91 E-value=1.1e-22 Score=240.62 Aligned_cols=325 Identities=15% Similarity=0.122 Sum_probs=226.1
Q ss_pred chHHHHHHHHHHHhhccccCCcceeeeccCCCCccccCCCccccchhHHHHHHhh-ccCChHHHHHHHHHHHhhhhcccc
Q 006488 156 KSVEDEAWDLLRESIVYYCGNPVGTIAANDPNDSTILNYDQVFIRDFIPSGIAFL-LKGEYDIVRNFILHTLQLQSWEKT 234 (643)
Q Consensus 156 ~~~~~~A~~~Lr~~~v~~~~~p~G~~Aa~d~~~a~~~~Y~~vfGRDt~Isalg~L-~~G~peiaR~~L~~~l~LQ~~e~~ 234 (643)
|++.+.++..|+.++..+ | . | +.-.....|.||+.+++++++ ..++++++|+.|..++..|
T Consensus 547 N~l~~~a~~tl~~n~~~~---~---t---D----~p~REr~~W~gD~~~~a~~~l~~~g~~~lar~~L~~l~~~Q----- 608 (956)
T 2okx_A 547 NATWEISRHTTRLCMEDT---F---V---D----CPSYEQVFWVGDSRNEALVNYYVFGETEIVERCLNLVPGSA----- 608 (956)
T ss_dssp HHHHHHHHHHHHHTBSSS---B---C---S----CTTTTCCCBHHHHHHHHHHHHHHTCCCHHHHHHHHHGGGGT-----
T ss_pred HHHHHHHHHHHHHhcccC---c---c---C----CCcccCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhc-----
Confidence 466777777777744322 1 1 1 111234689999999999975 4789999999997665433
Q ss_pred ccCCCCCCCCCCCccccccccCCCCCCCcccccCCCCCCCCCCccCCCChHHHHHHHHHHHHHHhCCHhHHHhhhcHHHH
Q 006488 235 MDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLSVQERVDVQTGI 314 (643)
Q Consensus 235 ld~~q~~~GliP~~fKi~~~~~r~~~~~~~~~l~pd~Ge~a~~~ygsVDAtLWwIial~~Y~~~TGD~afl~~l~~~p~i 314 (643)
..+|.+|+.+ |... .....|.++||++++++|+++|||.+|++++ +|.|
T Consensus 609 -----~~dG~ip~~~-------------------p~~~-----~~~~~~~~~~~i~~~~~yy~~tGD~~~L~e~--yp~l 657 (956)
T 2okx_A 609 -----DETPLYLDQV-------------------PSAW-----SSVIPNWTFFWILACREYAAHTGNEAFAARI--WPAV 657 (956)
T ss_dssp -----TTCTTCCSBS-------------------SCSS-----CCCCHHHHHHHHHHHHHHHHHHTCHHHHHHH--HHHH
T ss_pred -----ccCCCcCccc-------------------cccc-----cCCCcChHHHHHHHHHHHHHHhCCHHHHHHH--HHHH
Confidence 3678899854 2111 1245788999999999999999999999987 9999
Q ss_pred HHHHHHHHhCCCCCCCceeec-C---CCcccccccCCCCCchhhHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHH
Q 006488 315 KMILKLCLADGFDMFPTLLVT-D---GSCMIDRRMGIHGHPLEIQALFYSALLSAREMLTPEDGSADLIRALNNRLVALS 390 (643)
Q Consensus 315 ~~iL~w~l~~gf~~~~~lLv~-d---G~~w~D~r~~r~G~pVEIQALwY~AL~~aaeLa~~~~g~~~~a~~l~~ra~~Lk 390 (643)
+.+++|+.... +. .+++. . -.+|.|..-++.|.++..|+|+|.||+.+++|++.+ ++.+.++++++++++|+
T Consensus 658 k~~l~~~~~~~-d~--~GLl~~~~~~~~DW~d~~~~~~G~~~~~~a~~~~al~~~a~lA~~L-G~~~~a~~y~~~A~~lk 733 (956)
T 2okx_A 658 KHTLTHYLEHI-DD--SGLLNMAGWNLLDWAPIDQPNEGIVTHQNLFLVKALRDSRALAAAA-GATEEADAFAARADLLA 733 (956)
T ss_dssp HHHHHHHHTTB-CT--TSSBCCSSCCCCCSSSCCCCSSSEEHHHHHHHHHHHHHHHHHHHHT-TCGGGGHHHHHHHHHHH
T ss_pred HHHHHHHHhcC-CC--CCCEEeCCCCccCccCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHHHHH
Confidence 99999998531 11 22222 1 247877533577889999999999999999999986 45556788999999999
Q ss_pred HHHHHHhhhchhhhhhhhhccccchhhhhhcccCCCCCCCCccccccccCCCceeeecccCCccCcccccccchhhHhcC
Q 006488 391 FHIREYYWIDMKKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEFMPHIGGYLIGNLQPAHMDFRFFSLGNLWSVVSS 470 (643)
Q Consensus 391 ~~~~~~FW~d~~~l~~iyr~~~e~y~~~a~~~~n~~pdsip~~l~~f~~~~ggYL~~~v~p~~~d~r~~slGN~LAL~sg 470 (643)
+.|+++||+++.+.+..+ . ...| .|. + .....++++++++|
T Consensus 734 ~ai~~~~wd~~~g~y~d~-----------~------------------~~~g-------~~~--~-~~~~~s~~lall~G 774 (956)
T 2okx_A 734 ETINAVLWDEEKRAYIDC-----------I------------------HADG-------RRS--D-VYSMQTQVVAYLCG 774 (956)
T ss_dssp HHHHHHSEETTTTEECSE-----------E------------------CTTS-------CBC--C-CCBHHHHHHHHHTT
T ss_pred HHHHHHhcCCCCCEEEee-----------e------------------cCCC-------Ccc--c-ccccHHHHHHHHhC
Confidence 999999998765543211 0 0000 010 0 01244778899999
Q ss_pred CCCHHHHHHHHHHHHHhHHHhhccCCCcccCCCcCCCCceeecCCCCCCCCCcccc-CCCccchHHHHHHHHHHcCCHHH
Q 006488 471 LATVDQSHAILDLIEAKWAELVADMPLKICYPALEGQEWRIITGSDPKNTPWSYHN-GGSWPTLLWQLTVACIKMNRVEI 549 (643)
Q Consensus 471 lld~eqa~~Vv~~l~~~w~~L~tp~gLR~l~P~~~~~~wr~~~~gd~~~~P~sYHN-G~VWP~l~~~~a~Al~k~G~~~~ 549 (643)
+++++++++| +.+.. + + |..||+ |++||+ +.++.|+.++|+.+.
T Consensus 775 l~p~~~~~av-~~Ll~-------~-------~------------------~~gy~~~Gt~w~~--~~li~aLar~G~~d~ 819 (956)
T 2okx_A 775 VAQGEREAVI-EGYLS-------S-------P------------------PPAFVQIGSPFMS--FFYYEALEKAGRQTL 819 (956)
T ss_dssp CSCHHHHHHH-HHHHH-------S-------C------------------CTTSBCCCSHHHH--HHHHHHHHHTTCHHH
T ss_pred CCCHHHHHHH-HHHhc-------C-------C------------------CcccccCCChhHH--HHHHHHHHHCCCHHH
Confidence 9999998877 43332 1 0 347887 999987 889999999999999
Q ss_pred HHHHHHHHHHH-hcC--CCCCccccCCCCCCC---CCCCCccchHHHHHHHHH-HHHhc-CCCCcc
Q 006488 550 AEKAVKLAERH-ISG--DKWPEYYDTKRGRFI---GKQSRLYQTWSIAGYLVA-KLLLD-NPAAAK 607 (643)
Q Consensus 550 A~~ll~~~~~~-l~~--~~~pE~FDG~~g~p~---G~~Ac~~QAWSaA~~L~a-~~lL~-~P~~~~ 607 (643)
|.+++...... +.. ..++|.||+.++... +...+..|+|++|....+ +.++. .|+..+
T Consensus 820 A~~ll~~~~~~~~~~g~tt~~E~~d~~~~~~~~~~~~~~s~nh~Wsag~~~~L~q~l~GI~p~~pG 885 (956)
T 2okx_A 820 MLDDIRRNYGQMLRYDATTCWEMYPNFAENRSNPDMLTRSHCHAWSAAPGYFLGSSILGVKRGADG 885 (956)
T ss_dssp HHHHHHHHHHHHHHTTCSSCCSSCSSCCTTSSSTTSSCSCSCCGGGCTHHHHHHHTTSCEEECSGG
T ss_pred HHHHHHHHHHHHHhcCCCccceeccCCCCCcccCCCcccccCcHHHHHHHHHHHHHhcCccccCCC
Confidence 99998654332 222 348999998653211 011134699999875444 44555 665444
No 8
>3cih_A Putative alpha-rhamnosidase; structural genomics, protein structure initiative II, NYSGXRC, (alpha/alpha)6 barrel domain; 2.33A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.90 E-value=3.3e-22 Score=230.41 Aligned_cols=286 Identities=18% Similarity=0.210 Sum_probs=203.7
Q ss_pred CccccchhHHHHHHhh-ccCChHHHHHHHHHHHhhhhccccccCCCCCCCCCCCccccccccCCCCCCCcccccCCCCCC
Q 006488 195 DQVFIRDFIPSGIAFL-LKGEYDIVRNFILHTLQLQSWEKTMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDFGE 273 (643)
Q Consensus 195 ~~vfGRDt~Isalg~L-~~G~peiaR~~L~~~l~LQ~~e~~ld~~q~~~GliP~~fKi~~~~~r~~~~~~~~~l~pd~Ge 273 (643)
...|.+|+.|+++..+ ..++++++++.|..+ | |.+|.. +
T Consensus 338 R~~W~GD~~~~~~~~~~~~~~~~~~~~~l~~~---~-------------g~~p~~--------------------~---- 377 (739)
T 3cih_A 338 RWVWSGDAIQSYLMNYYLFFDSESVKRTIWLL---R-------------GKDPVT--------------------S---- 377 (739)
T ss_dssp CCCCHHHHHHHHHHHHTTTCCHHHHHHHHHHH---H-------------CCSSCC--------------------S----
T ss_pred cceecCchHHHHHHHHHHhCCHHHHHHHHHHh---c-------------cCCCCc--------------------c----
Confidence 4699999999998865 457899999887422 2 223420 1
Q ss_pred CCCCccCC-CChHHHHHHHHHHHHHHhCCHhHHHhhhcHHHHHHHHHHHHhCCCCCCCceeec--CC----CcccccccC
Q 006488 274 AAIGRVAP-VDSGLWWIILLRAYGKCSGDLSVQERVDVQTGIKMILKLCLADGFDMFPTLLVT--DG----SCMIDRRMG 346 (643)
Q Consensus 274 ~a~~~ygs-VDAtLWwIial~~Y~~~TGD~afl~~l~~~p~i~~iL~w~l~~gf~~~~~lLv~--dG----~~w~D~r~~ 346 (643)
++++ +|.++||++++++|+++|||.+|++++ +|.|+.+++|+.... + +.+++. .| .+|+|..++
T Consensus 378 ----~~~~~~d~~l~wi~~~~~yy~~tGD~~~L~e~--~p~l~~~ld~~~~~~-d--~~GL~~~~~G~W~~~dW~d~~~~ 448 (739)
T 3cih_A 378 ----HSNTIMDYTFYWFLSVYDYYMYSGDRHFVNQL--YPRMQTMMDYVLGRT-N--KNGMVEGMSGDWVFVDWADGYLD 448 (739)
T ss_dssp ----SGGGBHHHHHHHHHHHHHHHHHHCCHHHHHHH--HHHHHHHHHHHHTTB-C--TTSCBCCCTTCBCCSCCCTTCCC
T ss_pred ----ccCCccchhHHHHHHHHHHHHHhCCHHHHHHH--HHHHHHHHHHHHHhc-C--CCCCcccCCCCcccCCCcccccC
Confidence 1233 789999999999999999999999997 999999999998631 1 123322 22 378886678
Q ss_pred CCCCchhhHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhhhccccchhhhhhcccCCC
Q 006488 347 IHGHPLEIQALFYSALLSAREMLTPEDGSADLIRALNNRLVALSFHIREYYWIDMKKLNEIYRYKTEEYSYDAVNKFNIY 426 (643)
Q Consensus 347 r~G~pVEIQALwY~AL~~aaeLa~~~~g~~~~a~~l~~ra~~Lk~~~~~~FW~d~~~l~~iyr~~~e~y~~~a~~~~n~~ 426 (643)
+.|.++++|+|+|.||+.+++|++.+ |+.+.+++++++|++|++.|+++||+++.+.+.
T Consensus 449 ~~G~~~~~~a~~y~al~~~a~lA~~l-G~~~~A~~y~~~A~~lk~a~~~~~wd~~~G~y~-------------------- 507 (739)
T 3cih_A 449 KKGELSFEQVLFCRSLETMALCADLV-GDKDGQQKYEKLASALKAKLEPTFWNNQKQAFV-------------------- 507 (739)
T ss_dssp CSSEEHHHHHHHHHHHHHHHHHHHHH-TCHHHHHHHHHHHHHHHHHHHHHHEETTTTEEC--------------------
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHHc-CChHHHHHHHHHHHHHHHHHHHhccCcccCeeE--------------------
Confidence 88999999999999999999999975 667778999999999999999999987554321
Q ss_pred CCCCCccccccccCCCceeeecccCCccCcccccccchhhHhcCCCCHHHHHHHHHHHHHhHHHhhccCCCcccCCCcCC
Q 006488 427 PDQIPPWLVEFMPHIGGYLIGNLQPAHMDFRFFSLGNLWSVVSSLATVDQSHAILDLIEAKWAELVADMPLKICYPALEG 506 (643)
Q Consensus 427 pdsip~~l~~f~~~~ggYL~~~v~p~~~d~r~~slGN~LAL~sglld~eqa~~Vv~~l~~~w~~L~tp~gLR~l~P~~~~ 506 (643)
.+..+..+.|. ....+|++|+++|+++++++++|++.+.. + +
T Consensus 508 -------------------~~~~~G~~~d~-~~~~s~~laL~~Gl~~~e~~~~v~~~L~~-------~-------~---- 549 (739)
T 3cih_A 508 -------------------HNCVDGRQSDA-VTRYANMFSVFFDYLNADKQQAIKQSVLL-------N-------D---- 549 (739)
T ss_dssp -------------------SEEETTEECSC-CCHHHHHHHHHTTCSCHHHHHHHHHHTTT-------C-------T----
T ss_pred -------------------eecCCCCcCcc-cchHHhHHHHHHCCCCHHHHHHHHHHHhc-------C-------c----
Confidence 11111111111 22336789999999999999888875531 0 1
Q ss_pred CCceeecCCCCCCCCCccccCCCccchHHHHHHHHHHcCCHHHHHHHHHHHHH-HhcC--CCCCccccCCCCC---C--C
Q 006488 507 QEWRIITGSDPKNTPWSYHNGGSWPTLLWQLTVACIKMNRVEIAEKAVKLAER-HISG--DKWPEYYDTKRGR---F--I 578 (643)
Q Consensus 507 ~~wr~~~~gd~~~~P~sYHNG~VWP~l~~~~a~Al~k~G~~~~A~~ll~~~~~-~l~~--~~~pE~FDG~~g~---p--~ 578 (643)
..||+| |||++++++.||.++|+.+.|.+++...-. .+.. ..++|.||+.... + .
T Consensus 550 ---------------~~~~~~--tp~~~~~~~~aL~~~G~~d~A~~ll~~~w~~~v~~Gattl~E~~~~~~~~~~~~~~~ 612 (739)
T 3cih_A 550 ---------------EILKIT--TPYMRFYELEALCALGEQETVMKEMKAYWGGMLKAGATSFWEKYNPEESGTQHLAMY 612 (739)
T ss_dssp ---------------TSCCCC--SHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTTCSSCCSCCCTTCCGGGGGCBT
T ss_pred ---------------cccccc--chhHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCceeEEecccccCCccccccc
Confidence 125666 689999999999999999999998864322 2322 2479999985311 1 1
Q ss_pred ----CCCCCccchHHHHH-HHHHHHHhc-CCCCcc
Q 006488 579 ----GKQSRLYQTWSIAG-YLVAKLLLD-NPAAAK 607 (643)
Q Consensus 579 ----G~~Ac~~QAWSaA~-~L~a~~lL~-~P~~~~ 607 (643)
+...|. +|+++. ..+...++. .|+.++
T Consensus 613 g~~~~~s~~H--aW~ag~~~~l~~~ilGI~p~~pg 645 (739)
T 3cih_A 613 GRPYGKSLCH--AWGASPIYLLGKYYLGVKPTKEG 645 (739)
T ss_dssp TBTTCSCSSB--GGGCTHHHHHHHHTSCEEEEEGG
T ss_pred ccccCccccc--ccccchHHHHHHHHhccCcCCCC
Confidence 112344 899873 455566776 775443
No 9
>1lf6_A Glucoamylase; (alpha/alpha) barrel, 6 alpha-helical hairpin torroid, super beta sandwich, carbohydrase family GH15; 2.10A {Thermoanaerobacteriumthermosaccharolyticum} SCOP: a.102.1.5 b.30.5.5 PDB: 1lf9_A*
Probab=99.84 E-value=1.5e-19 Score=206.98 Aligned_cols=348 Identities=15% Similarity=0.077 Sum_probs=226.2
Q ss_pred cchHHHHHHHHHHHhhccccCCcceeeeccC-CC----C--ccccCCCccccchhHHHHHHhhccCChHHHHHHHHHHHh
Q 006488 155 AKSVEDEAWDLLRESIVYYCGNPVGTIAAND-PN----D--STILNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILHTLQ 227 (643)
Q Consensus 155 ~~~~~~~A~~~Lr~~~v~~~~~p~G~~Aa~d-~~----~--a~~~~Y~~vfGRDt~Isalg~L~~G~peiaR~~L~~~l~ 227 (643)
-+.++.+++..|+.+. ..+|.|.+.|.. .+ . ..-..|.-+|+||+.+++.+++..|+++.++.+|..++.
T Consensus 294 ~~~~~~rs~~~Lk~l~---~~~~~G~iiAs~t~~~~e~~~~~~~~dY~~~W~RD~~~~~~al~~~G~~~~a~~~l~~l~~ 370 (684)
T 1lf6_A 294 ANSLYYNSMMILKASE---DKTNKGAYIASLSIPWGDGQRDDNTGGYHLVWSRDLYHVANAFIAAGDVDSANRSLDYLAK 370 (684)
T ss_dssp CCHHHHHHHHHHHTTB---CSSSTTCBCSCSSCTTGGGSBSBSCCGGGSBCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcc---CCCCCccEEeecCCCCccccCCCCCCCCEEEeccHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 3578888888887753 124667774421 11 0 012367899999999999999988999999999999888
Q ss_pred hhhccccccCCCCCCCCCCCccccccccCCCCCCCcccccCCCCCCCCCCccCCCChHHHHHHHHHHHHHHhCCHhHHHh
Q 006488 228 LQSWEKTMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLSVQER 307 (643)
Q Consensus 228 LQ~~e~~ld~~q~~~GliP~~fKi~~~~~r~~~~~~~~~l~pd~Ge~a~~~ygsVDAtLWwIial~~Y~~~TGD~afl~~ 307 (643)
.|. .+|-++..+.+ . ++ |..| -...|++.++|++++.|. .+|
T Consensus 371 ~q~----------~~G~~~~~~~~-----~-------G~--p~w~------~~Q~D~~g~~l~~~~~~~-~~g------- 412 (684)
T 1lf6_A 371 VVK----------DNGMIPQNTWI-----S-------GK--PYWT------GIQLDEQADPIILSYRLK-RYD------- 412 (684)
T ss_dssp HHH----------HHSSCCSCBCT-----T-------SC--BCCC------CCCHHHHHHHHHHHHHTT-CGG-------
T ss_pred hcC----------CCCCcccceeC-----C-------CC--cccC------CccccchHHHHHHHHHHH-HcC-------
Confidence 776 33434443311 0 11 1111 125899999999998553 455
Q ss_pred hhcHHH-HHHHHHHHHhCCCCCCCceeecCCCcccccccCCCCCchhhHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHH
Q 006488 308 VDVQTG-IKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALLSAREMLTPEDGSADLIRALNNRL 386 (643)
Q Consensus 308 l~~~p~-i~~iL~w~l~~gf~~~~~lLv~dG~~w~D~r~~r~G~pVEIQALwY~AL~~aaeLa~~~~g~~~~a~~l~~ra 386 (643)
+ ++. ++.+++|+...+ -.++...|-++ .|....+.++.|.||+++++|++.+ ++.+.++.+.+.+
T Consensus 413 ~--~~~~v~~al~~i~~~~-------~~~~~g~WE~~----~g~~~~t~~~~~~aL~~~a~lA~~~-g~~~~a~~~~~~a 478 (684)
T 1lf6_A 413 L--YDSLVKPLADFIIKIG-------PKTGQERWEEI----GGYSPATMAAEVAGLTCAAYIAEQN-KDYESAQKYQEKA 478 (684)
T ss_dssp G--TTTTHHHHHHHHHHHC-------SSBSSCTTSSC----CBBCHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHH
T ss_pred c--hHHHHHHHHHHHHHhC-------CCCCccccccc----CCcCHHHHHHHHHHHHHHHHHHHHc-CChHHHHHHHHHH
Confidence 3 886 999999998642 33444458765 3677888999999999999999974 6677789999999
Q ss_pred HHHHHHHHHHhhhch-----hhhhhhhhccccchhhhhhcccCCCCCCCCccccccccCCCc-eeeecccCC-ccCcccc
Q 006488 387 VALSFHIREYYWIDM-----KKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEFMPHIGG-YLIGNLQPA-HMDFRFF 459 (643)
Q Consensus 387 ~~Lk~~~~~~FW~d~-----~~l~~iyr~~~e~y~~~a~~~~n~~pdsip~~l~~f~~~~gg-YL~~~v~p~-~~d~r~~ 459 (643)
.+|+..|+++||+++ ++.|.. +. ++. -.+.|. +.+.|-.+. ..+..+|
T Consensus 479 ~~i~~~i~~~~w~~~~~~g~~~~f~r-----------~~------~d~--------~~~~~~~~~~~~~~~~~~~~~~lD 533 (684)
T 1lf6_A 479 DNWQKLIDNLTYTENGPLGNGQYYIR-----------IA------GLS--------DPDADFMINIANGGGVYDQKEIVD 533 (684)
T ss_dssp HHHHHHHHHHHEESSCSSTTSCEECS-----------CB------SSS--------CTTSCCEEEETTTTEEEEGGGCCC
T ss_pred HHHHHHHHHhccCCCcccccCCeeEE-----------Ee------ccC--------CCccccccccccccccCCCCCcEe
Confidence 999999999999875 332211 00 000 000000 111111000 0011133
Q ss_pred cccch-hhHhcCCCCHH--HHHHHHHHHHHhHHHhhcc--CC--CcccCCCcCCCCceeecCCCCCCCCCcc-cc--CCC
Q 006488 460 SLGNL-WSVVSSLATVD--QSHAILDLIEAKWAELVAD--MP--LKICYPALEGQEWRIITGSDPKNTPWSY-HN--GGS 529 (643)
Q Consensus 460 slGN~-LAL~sglld~e--qa~~Vv~~l~~~w~~L~tp--~g--LR~l~P~~~~~~wr~~~~gd~~~~P~sY-HN--G~V 529 (643)
+ ++ +++.+|+++++ ++...++.|.+ +|... .| ++- |+ ..+|.. ..+...| |+ |++
T Consensus 534 a--s~l~~~~~G~~~~~dpr~~~Tl~~i~~---~L~~~~~~G~~~~R-Y~---~d~y~~------~~~G~~f~~~g~g~~ 598 (684)
T 1lf6_A 534 P--SFLELVRLGVKSADDPKILNTLKVVDS---TIKVDTPKGPSWYR-YN---HDGYGE------PSKTELYHGAGKGRL 598 (684)
T ss_dssp G--GGGHHHHTTSSCTTCHHHHHHHHHHHH---HSEEEETTEEEECS-ST---TCCCSC------SBTTBCCSSSSCCCB
T ss_pred H--HHhHHHhcCCcCCCCHHHHHHHHHHHH---HhccCCCCCCeEec-cC---CCCCCc------ccCCCccccCCCCCc
Confidence 3 43 45678988655 77777777764 44221 12 110 11 011110 1112223 34 799
Q ss_pred ccchHHHHHHHHHHcCCHHHHHHHHHHHHHHhcC-CCCCccccCCCCCCCCCCCCccchHHHHHHHHHHHHhc
Q 006488 530 WPTLLWQLTVACIKMNRVEIAEKAVKLAERHISG-DKWPEYYDTKRGRFIGKQSRLYQTWSIAGYLVAKLLLD 601 (643)
Q Consensus 530 WP~l~~~~a~Al~k~G~~~~A~~ll~~~~~~l~~-~~~pE~FDG~~g~p~G~~Ac~~QAWSaA~~L~a~~lL~ 601 (643)
||+....++.++++.|+ +|.++++.+..+-.. ..+||-||+.+|+|.| +|.||+||.|++|.+...|.
T Consensus 599 W~~~t~~~a~al~~~G~--~A~~~~~~l~~~a~~~gllpE~~~~~~g~~~G--~a~PqaWSha~~i~~~~~l~ 667 (684)
T 1lf6_A 599 WPLLTGERGMYEIAAGK--DATPYVKAMEKFANEGGIISEQVWEDTGLPTD--SASPLNWAHAEYVILFASNI 667 (684)
T ss_dssp BHHHHHHHHHHHHHTTC--CCHHHHHHHHHHSCTTSCCCSCBCTTTCCBCS--SCSSCHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCh--HHHHHHHHHHHhcccCCccCeeecCCCCCCCC--CCcchHHHHHHHHHHHHHHh
Confidence 99999999999999998 788888877765444 3479999999999987 45699999999998876554
No 10
>1ulv_A Glucodextranase; GH family 15, (alpha-alpha)6-barrel, SLH domain, hydrolase; HET: ACR; 2.42A {Arthrobacter globiformis} SCOP: a.102.1.5 b.1.18.2 b.1.9.3 b.30.5.5 PDB: 1ug9_A*
Probab=99.83 E-value=3e-19 Score=212.18 Aligned_cols=345 Identities=17% Similarity=0.107 Sum_probs=225.2
Q ss_pred chHHHHHHHHHHHhhccccCCcceeeeccCCCCc-------cccCCCccccchhHHHHHHhhccCChHHHHHHHHHHHhh
Q 006488 156 KSVEDEAWDLLRESIVYYCGNPVGTIAANDPNDS-------TILNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILHTLQL 228 (643)
Q Consensus 156 ~~~~~~A~~~Lr~~~v~~~~~p~G~~Aa~d~~~a-------~~~~Y~~vfGRDt~Isalg~L~~G~peiaR~~L~~~l~L 228 (643)
++++.+++..|+.+. +..++-+++|+...+-- .-..|.-+|+||+.+++.+++..|++++++.+|..++..
T Consensus 283 ~~~~~rSl~~Lk~l~--~~~t~GaiiAS~t~p~~e~~gg~rn~dgYry~W~RDaa~t~~all~~G~~e~A~~~l~~L~~~ 360 (1020)
T 1ulv_A 283 RTQYDVSLMTVKSHE--DKTFPGAFIASLTIPWGQAASAETHREGYHAVWARDMYQSVTALLAAGDEEAAARGVEWLFTY 360 (1020)
T ss_dssp HHHHHHHHHHHHTTB--CSSSTTCBCSCSSCTTGGGSBCSSCCCTTCSBCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhc--CCCCCCeEEEeCCCCcccccCCccCCCCCceEccchHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 467788888887753 22224566676432210 011488899999999999999889999999999999887
Q ss_pred hhccccccCCCCCCCCCCCccccccccCCCCCCCcccccCCCCCCCCCCccC--CCChHHHHHHHHHHHHHHhCCHhHHH
Q 006488 229 QSWEKTMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDFGEAAIGRVA--PVDSGLWWIILLRAYGKCSGDLSVQE 306 (643)
Q Consensus 229 Q~~e~~ld~~q~~~GliP~~fKi~~~~~r~~~~~~~~~l~pd~Ge~a~~~yg--sVDAtLWwIial~~Y~~~TGD~afl~ 306 (643)
|. ..+|.++..+.+. |+. +++ ..|.+.++|+++++|.+ + | +
T Consensus 361 Q~---------~~~G~~~~~y~i~-------------------G~~---~w~~~Q~D~~g~~l~~~~~~~~-~-d----~ 403 (1020)
T 1ulv_A 361 QQ---------QPDGHFPQTSRVD-------------------GTI---GQNGIQLDETAFPILLANQIGR-T-D----A 403 (1020)
T ss_dssp TC---------CTTSCCCSCBCTT-------------------SCB---CCCCCBTHHHHHHHHHHHHHTC-C-C----H
T ss_pred hc---------CCCCCeeeEEecC-------------------CCc---CCCCccCccchHHHHHHHHHHh-c-C----H
Confidence 74 1456666655221 111 122 78999999999999976 4 5 3
Q ss_pred hhhcHH-HHHHHHHHHHhCCCCCCCceeecCCCcccccccCCCCCchhhHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHH
Q 006488 307 RVDVQT-GIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALLSAREMLTPEDGSADLIRALNNR 385 (643)
Q Consensus 307 ~l~~~p-~i~~iL~w~l~~gf~~~~~lLv~dG~~w~D~r~~r~G~pVEIQALwY~AL~~aaeLa~~~~g~~~~a~~l~~r 385 (643)
.+ ++ .++.+++|+...+ ..++-..|-++ .|+-....++.|.||+++++|++.+ ++.+.++++++.
T Consensus 404 ~~--w~~~v~~al~~i~~~g-------~~~~~~~WEe~----~g~~~~t~~~~~~AL~~aa~lA~~~-G~~~~a~~w~~~ 469 (1020)
T 1ulv_A 404 GF--YRNELKPAADYLVAAG-------PKTPQERWEET----GGYSTSTLASQIAALAAAADIAGKN-GDAGSAAVYRAT 469 (1020)
T ss_dssp HH--HHHTHHHHHHHHHHHC-------SCBSBCTTSSC----CBEEHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHH
T ss_pred HH--HHHHHHHHHHHHHHhC-------CCCChhhhccc----CCcCHHHHHHHHHHHHHHHHHHHHc-CChhHHHHHHHH
Confidence 33 88 8999999998642 23444458764 4677889999999999999999975 667778999999
Q ss_pred HHHHHHHHHHHhhhch-----hhhhhhhhccccchhhhhhcccCCCCCCCCccccccccCCCceeeecccCCccCccccc
Q 006488 386 LVALSFHIREYYWIDM-----KKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEFMPHIGGYLIGNLQPAHMDFRFFS 460 (643)
Q Consensus 386 a~~Lk~~~~~~FW~d~-----~~l~~iyr~~~e~y~~~a~~~~n~~pdsip~~l~~f~~~~ggYL~~~v~p~~~d~r~~s 460 (643)
+..|+..|+++||+++ ++.|... .+ + .+ |.. -..-|+.+.+..+ .+ +..+|
T Consensus 470 Ad~i~~~i~~~~w~~~g~~~~~g~f~r~--~~--------d-g~--~~~---~~~~~~~n~~~~~----~~---~~~lD- 525 (1020)
T 1ulv_A 470 ADEWQRSTEKWMFTTNGPVGDGKYYLRI--SA--------T-GN--PND---GATRDWGNGAGVH----PE---NAVLD- 525 (1020)
T ss_dssp HHHHHHTHHHHHEESSCSSTTSCEECSE--ES--------S-SC--TTS---CCEEECSTTCCEE----EG---GGCCB-
T ss_pred HHHHHHHHHHhCCCCcccccccCeeEEE--ec--------C-CC--ccc---ccccccccccccC----CC---CCeee-
Confidence 9999999999999875 3332210 00 0 00 000 0000111111000 01 11122
Q ss_pred ccchh-hHhcCCCCHH--HHHHHHHHHHHhHHHhhc--cCCCcccCCCcCCCCceeecCCCCCCCCCccc---c------
Q 006488 461 LGNLW-SVVSSLATVD--QSHAILDLIEAKWAELVA--DMPLKICYPALEGQEWRIITGSDPKNTPWSYH---N------ 526 (643)
Q Consensus 461 lGN~L-AL~sglld~e--qa~~Vv~~l~~~w~~L~t--p~gLR~l~P~~~~~~wr~~~~gd~~~~P~sYH---N------ 526 (643)
++++ .+.+|+++++ +...-++.|++ .|.. +.| | .-.+|++.+|| |
T Consensus 526 -as~l~l~~~G~~~~~dpr~~~Tl~~i~~---~L~~~~~~G------------~-----~~~RY~~D~Y~~~~dG~~~~~ 584 (1020)
T 1ulv_A 526 -GGFLEFVRLGVKAPADPYVADSLAETDA---SISQETPGG------------R-----MWHRYTYDGYGEKADGSPWDG 584 (1020)
T ss_dssp -GGGGHHHHTTSSCTTCHHHHHHHHHHHH---HHEEEETTE------------E-----EECSBTTCCCSCCTTSCCCSS
T ss_pred -HHHHHHHHhCCCCCCcHHHHHHHHHHHH---HhcccCCCC------------c-----eeecCCccccccccCCCcccC
Confidence 3443 3368986554 55666677764 4431 112 1 11234444555 2
Q ss_pred ---CCCccchHHHHHHHHHHcCCHHHHHHHHHHHHHHhcC-CCCCccccC---------CCCCCCCCCCCccchHHHHHH
Q 006488 527 ---GGSWPTLLWQLTVACIKMNRVEIAEKAVKLAERHISG-DKWPEYYDT---------KRGRFIGKQSRLYQTWSIAGY 593 (643)
Q Consensus 527 ---G~VWP~l~~~~a~Al~k~G~~~~A~~ll~~~~~~l~~-~~~pE~FDG---------~~g~p~G~~Ac~~QAWSaA~~ 593 (643)
|++||....-++.++++.|+ +|.++++.+..+-.. ..+||.||. .+|+|.| +|.|||||.|++
T Consensus 585 ~g~g~~W~l~T~wlae~~~~~G~--~A~~~~~~l~~~a~~~GllpEq~~~g~~~~~~~~~tG~p~~--g~~PqaWSha~~ 660 (1020)
T 1ulv_A 585 TGIGRLWPLLSGERGEYALANGQ--DALPYLETMHSAANAGYMIPEQVWDRDEPTSYGHELGRSTG--SASPLSWAMAQY 660 (1020)
T ss_dssp CCCCCBCTHHHHHHHHHHHHTTC--CCHHHHHHHHHTSCTTCCCCSCBBCCSSCCSSCCCBTSBCS--SCBSCHHHHHHH
T ss_pred CCCCChHHHHHHHHHHHHHHhhH--HHHHHHHHHHHhccccCCcceeecccccccccCCcCCcccc--CCcHHHHHHHHH
Confidence 78999888888889999997 788888877665443 348999995 3455552 477999999999
Q ss_pred HHHHHHhcC
Q 006488 594 LVAKLLLDN 602 (643)
Q Consensus 594 L~a~~lL~~ 602 (643)
|.+.+.+.+
T Consensus 661 I~~~~~l~~ 669 (1020)
T 1ulv_A 661 VRLAAGVKA 669 (1020)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhC
Confidence 888776653
No 11
>2fba_A Glucoamylase Glu1; (alpha-alpha)6 barrel, TRIS, hydrolase; 1.10A {Saccharomycopsis fibuligera} SCOP: a.102.1.1 PDB: 1ayx_A* 2f6d_A
Probab=99.39 E-value=4.4e-11 Score=132.53 Aligned_cols=339 Identities=17% Similarity=0.117 Sum_probs=199.3
Q ss_pred CCcceeeeccCCCCccccCCCccccchhHHHHHHhhccCC--------hHHHHHHHHHHHhhhhccccccCCCCCCCCCC
Q 006488 175 GNPVGTIAANDPNDSTILNYDQVFIRDFIPSGIAFLLKGE--------YDIVRNFILHTLQLQSWEKTMDCHSPGQGLMP 246 (643)
Q Consensus 175 ~~p~G~~Aa~d~~~a~~~~Y~~vfGRDt~Isalg~L~~G~--------peiaR~~L~~~l~LQ~~e~~ld~~q~~~GliP 246 (643)
+.|.|.+.|..+. ..+.|.-+|.||+.+++.+++..|. .++++.++.....+|.... ..|-++
T Consensus 46 ~~~~GaiIASptt--snpDYrY~W~RDaa~t~~aL~~~g~~~~~~~~l~~~a~~y~~~~~~lq~~~~-------~~G~~~ 116 (492)
T 2fba_A 46 NGVPGTVIASPST--SNPDYYYQWTRDSAITFLTVLSELEDNNFNTTLAKAVEYYINTSYNLQRTSN-------PSGSFD 116 (492)
T ss_dssp TSCTTCBCSCSCB--SSSBCCSEEHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHTSCB-------TTBCTT
T ss_pred CCCCCeEEEeCCC--CCCCCeEEccchHHHHHHHHHHhCcccccccchHHHHHHHHHHHHHHhcccC-------CCCCcC
Confidence 3446666653322 2478999999999999999876665 8889988876555665211 334444
Q ss_pred C-ccccccccCCCCCCCcccc-cCCCCCCCCCCccCCCChHHHHHHHHHHHHHHhCCHhHH---------------Hhhh
Q 006488 247 A-SFKVRTVPLDGDDSATEEV-LDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLSVQ---------------ERVD 309 (643)
Q Consensus 247 ~-~fKi~~~~~r~~~~~~~~~-l~pd~Ge~a~~~ygsVDAtLWwIial~~Y~~~TGD~afl---------------~~l~ 309 (643)
. .+.++-+|.-. - .++ ..+..| + -..|.+-+.++++..|.++..+.... +.
T Consensus 117 ~~~~~glgep~y~--v--dG~~~~~~w~-----~-~Q~D~~g~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 184 (492)
T 2fba_A 117 DENHKGLGEPKFN--T--DGSAYTGAWG-----R-PQNDGPALRAYAISRYLNDVNSLNEGKLVLTDSGDINFSSTED-- 184 (492)
T ss_dssp SGGGGGGGCCEEC--T--TSCBCCSCCS-----C-CBTTHHHHHHHHHHHHHHHHHHHSTTCCSSTTCTTCSCSSHHH--
T ss_pred cccccccCceeec--c--CCCcCCcccC-----C-ccccchhHHHHHHHHHHHHhhccccchhhhhhhccccccccHH--
Confidence 2 12111111000 0 000 001111 1 25788999999999998775443321 22
Q ss_pred cH-HHHHHHHHHHHhCCCCCCCceeecCCCcccccccCCCCCchhhHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHH
Q 006488 310 VQ-TGIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALLSAREMLTPEDGSADLIRALNNRLVA 388 (643)
Q Consensus 310 ~~-p~i~~iL~w~l~~gf~~~~~lLv~dG~~w~D~r~~r~G~pVEIQALwY~AL~~aaeLa~~~~g~~~~a~~l~~ra~~ 388 (643)
++ +.|+.+++++.... -.++-.-|=.+ .|+-....+.-+.||.++++|++.. ++.+.++.+.+.+..
T Consensus 185 ~~~~~i~~~l~~v~~~w-------~~pd~dlWEer----~g~~~~T~~~~~~AL~~aa~lA~~~-g~~~~a~~w~~~ad~ 252 (492)
T 2fba_A 185 IYKNIIKPDLEYVIGYW-------DSTGFDLWEEN----QGRHFFTSLVQQKALAYAVDIAKSF-DDGDFANTLSSTAST 252 (492)
T ss_dssp HHHHTHHHHHHHHHHHT-------TSCEECTTSCC----EECCHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhc-------CCCCCCCcCcc----CCCChHHHHHHHHHHHHHHHHHHHc-CCchHHHHHHHHHHH
Confidence 35 78999999998521 11332335433 3566788999999999999999874 567778889999899
Q ss_pred HHHHHHHH---hhhchhhhhhhhhccccchhhhhhcccCCCCCCCCccccccccCCCceeeecccCCccCcccccccchh
Q 006488 389 LSFHIREY---YWIDMKKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEFMPHIGGYLIGNLQPAHMDFRFFSLGNLW 465 (643)
Q Consensus 389 Lk~~~~~~---FW~d~~~l~~iyr~~~e~y~~~a~~~~n~~pdsip~~l~~f~~~~ggYL~~~v~p~~~d~r~~slGN~L 465 (643)
++..|.++ ||.++++.+.-+ |. ++++-....+| + ++|
T Consensus 253 i~~~I~~~~~~~w~~~~~~f~~~------~~----------------------------~~~~~~~~~lD----a--s~L 292 (492)
T 2fba_A 253 LESYLSGSDGGFVNTDVNHIVEN------PD----------------------------LLQQNSRQGLD----S--ATY 292 (492)
T ss_dssp HHHHHHSTTTCCEETTTTEECSS------HH----------------------------HHHTTSCCSCC----T--HHH
T ss_pred HHHHHHHhhhcCCCCCCCEEEEe------cc----------------------------ccccCCCCccc----H--HHH
Confidence 99999888 987544432100 00 00000111223 2 222
Q ss_pred --hH-hcC-------CC--CHHHHHHHHHHHHHhHHHhhccCCCcccCCCcCCCCceeecCCCCCCCCCccc-----cCC
Q 006488 466 --SV-VSS-------LA--TVDQSHAILDLIEAKWAELVADMPLKICYPALEGQEWRIITGSDPKNTPWSYH-----NGG 528 (643)
Q Consensus 466 --AL-~sg-------ll--d~eqa~~Vv~~l~~~w~~L~tp~gLR~l~P~~~~~~wr~~~~gd~~~~P~sYH-----NG~ 528 (643)
++ -++ ++ +..+...-++.|+. +|...+|+..-.+ ....+. +|..| .|. .|.
T Consensus 293 l~~~~~f~~~~~~~~~~~p~Dpr~l~Tl~ai~~---~L~~~~pin~~~~--~g~~v~-RY~~D------~y~g~~~~~g~ 360 (492)
T 2fba_A 293 IGPLLTHDIGESSSTPFDVDNEYVLQSYYLLLE---DNKDRYSVNSAYS--AGAAIG-RYPED------VYNGDGSSEGN 360 (492)
T ss_dssp HHHHHHSCTTSCCCCSCCTTCHHHHHHHHHHHH---HHHHHCGGGTTCS--SCCCCC-SCTTC------CBCSSSBSSCC
T ss_pred HHHHhccccccccCCccCCCCHHHHHHHHHHHH---HHhcccCccccCc--ceeEEE-eCCCC------CCCCCCccCCC
Confidence 21 232 22 33355566666654 6654544431000 001111 11111 233 378
Q ss_pred CccchHHHHHH----HH----HHcC-------------------------C----------------------HHHHHHH
Q 006488 529 SWPTLLWQLTV----AC----IKMN-------------------------R----------------------VEIAEKA 553 (643)
Q Consensus 529 VWP~l~~~~a~----Al----~k~G-------------------------~----------------------~~~A~~l 553 (643)
.|+--..-++. |+ .+.| + .+.|..+
T Consensus 361 pw~lcT~w~ae~ly~al~~~~~~~g~~~i~~~~~~f~~~~~~~~~~~~~G~~~~~~~~y~~~~~~~~~~~~~~~~~A~~~ 440 (492)
T 2fba_A 361 PWFLATAYAAQVPYKLAYDAKSASNDITINKINYDFFNKYIVDLSTINSAYQSSDSVTIKSGSDEFNTVADNLVTFGDSF 440 (492)
T ss_dssp CBHHHHHHHHHHHHHHHHHHHHHTCCEEEEGGGHHHHHHHTCCGGGTCTTGGGSSEEEECTTSHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhcCceecchhhHHHHHhhhhhhccccccccccccceeccCchhHHHHHHHHHHHHHHH
Confidence 88866544454 33 2444 3 5688888
Q ss_pred HHHHHHHhcCCC-CCccccCCCCCCCCCCCCccchHHHHHHHHHHHHhc
Q 006488 554 VKLAERHISGDK-WPEYYDTKRGRFIGKQSRLYQTWSIAGYLVAKLLLD 601 (643)
Q Consensus 554 l~~~~~~l~~~~-~pE~FDG~~g~p~G~~Ac~~QAWSaA~~L~a~~lL~ 601 (643)
++.+..+-...| +||=||..+|++.|-. |||||-|++|.+...+.
T Consensus 441 l~~~~~~~~~~GllsEq~d~~tG~~~ga~---PltwSha~li~aa~~~~ 486 (492)
T 2fba_A 441 LQVILDHINDDGSLNEQLNRYTGYSTGAY---SLTWSSGALLEAIRLRN 486 (492)
T ss_dssp HHHHHHHSCTTSCCCSEECTTTCCEESST---TCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCCCCccccCCCCCCCCCcc---chHHHHHHHHHHHHHHh
Confidence 888777665555 7999999999999855 99999999998876553
No 12
>1gai_A Glucoamylase-471; hydrolase, glycosidase, polysaccharide degradation, glycoPro; HET: MAN NAG BMA GAC; 1.70A {Aspergillus awamori} SCOP: a.102.1.1 PDB: 1gah_A* 3gly_A* 1dog_A* 1glm_A* 1agm_A* 3eqa_A*
Probab=99.36 E-value=1.5e-10 Score=127.54 Aligned_cols=311 Identities=15% Similarity=0.104 Sum_probs=184.4
Q ss_pred ccCCCccccchhHHHHHHhh---ccCChHHHHHHHHHHHh---hhhccccccCCCCCCCCCC------CccccccccCCC
Q 006488 191 ILNYDQVFIRDFIPSGIAFL---LKGEYDIVRNFILHTLQ---LQSWEKTMDCHSPGQGLMP------ASFKVRTVPLDG 258 (643)
Q Consensus 191 ~~~Y~~vfGRDt~Isalg~L---~~G~peiaR~~L~~~l~---LQ~~e~~ld~~q~~~GliP------~~fKi~~~~~r~ 258 (643)
.+.|.-+|.||+.+++.+++ ..|..++++.++..+.. +|.... ..|-++ -.|.| .+
T Consensus 45 npDYrY~W~RDaa~t~~aL~~~~~~G~~~~a~~~~~~l~~~~~lQ~~~~-------~~G~l~~~glgE~~y~v-----dG 112 (472)
T 1gai_A 45 NPDYFYTWTRDSGLVIKTLVDLFRNGDTDLLSTIEHYISSQAIIQGVSN-------PSGDLSSGGLGEPKFNV-----DE 112 (472)
T ss_dssp SSBCCSEEHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHHHCCB-------TTBCTTTTGGGCCEECT-----TS
T ss_pred CCCCeEEchhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhcccC-------CCCccccCCCCCceEcc-----CC
Confidence 47899999999999999988 77887877777766554 553111 334344 22311 10
Q ss_pred CCCCcccccCCCCCCCCCCccCCCCh-----HHHHHHHHHHHHHHhCCHhHHHhhhcHHHHHHHHHHHHhCCCCCCCcee
Q 006488 259 DDSATEEVLDPDFGEAAIGRVAPVDS-----GLWWIILLRAYGKCSGDLSVQERVDVQTGIKMILKLCLADGFDMFPTLL 333 (643)
Q Consensus 259 ~~~~~~~~l~pd~Ge~a~~~ygsVDA-----tLWwIial~~Y~~~TGD~afl~~l~~~p~i~~iL~w~l~~gf~~~~~lL 333 (643)
+.. .++.|. -..|. +-..+.+.+ +..+|+.++++. .+++.++.+++++.... .
T Consensus 113 -----~~~-~~~w~~------~Q~D~~g~ra~~~~~~~~~--l~~~g~~~~~~~-~~w~~i~~~l~~v~~~w-------~ 170 (472)
T 1gai_A 113 -----TAY-TGSWGR------PQRDGPALRATAMIGFGQW--LLDNGYTSAATE-IVWPLVRNDLSYVAQYW-------N 170 (472)
T ss_dssp -----CBC-CSCCSC------CCTHHHHHHHHHHHHHHHH--HHHTTCHHHHHH-THHHHHHHHHHHHHHHT-------T
T ss_pred -----Ccc-CCcCCC------ccccccchhHHHHHHHHHH--HHHcCCccccch-hHHHHHHHHHHHHHHhc-------C
Confidence 000 111211 13455 334455555 566899887665 25999999999997521 1
Q ss_pred ecCCCcccccccCCCCCchhhHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhhhcccc
Q 006488 334 VTDGSCMIDRRMGIHGHPLEIQALFYSALLSAREMLTPEDGSADLIRALNNRLVALSFHIREYYWIDMKKLNEIYRYKTE 413 (643)
Q Consensus 334 v~dG~~w~D~r~~r~G~pVEIQALwY~AL~~aaeLa~~~~g~~~~a~~l~~ra~~Lk~~~~~~FW~d~~~l~~iyr~~~e 413 (643)
.++-.-|=.+ .|+-....+.-+.||..+++|++.++.. +..+.+.+..++..+ ++||. +.|..
T Consensus 171 ~pd~dlWEer----~g~~~~T~~~~~~AL~~aa~lA~~~g~~---~~~w~~~ad~I~~~i-~~~w~---g~f~~------ 233 (472)
T 1gai_A 171 QTGYDLWEEV----NGSSFFTIAVQHRALVEGSAFATAVGSS---CSWCDSQAPQILCYL-QSFWT---GSYIL------ 233 (472)
T ss_dssp SCEECTTSCC----EEEEHHHHHHHHHHHHHHHHHHHHTTCC---CHHHHHHHHHHHHHH-GGGBC---SSSBC------
T ss_pred CCCCCCCccc----CCCCHHHHHHHHHHHHHHHHHHHHcCCc---HHHHHHHHHHHHHHH-HhhcC---CceEE------
Confidence 1332335433 3566788899999999999999875443 456777888889888 88985 11100
Q ss_pred chhhhhhcccCCCCCCCCccccccccCCCceeeecccCCccCcccccccchhhHhcCC------------CCHHHHHHHH
Q 006488 414 EYSYDAVNKFNIYPDQIPPWLVEFMPHIGGYLIGNLQPAHMDFRFFSLGNLWSVVSSL------------ATVDQSHAIL 481 (643)
Q Consensus 414 ~y~~~a~~~~n~~pdsip~~l~~f~~~~ggYL~~~v~p~~~d~r~~slGN~LAL~sgl------------ld~eqa~~Vv 481 (643)
. |. + -+....| + +.+|+...+. ++..+...-+
T Consensus 234 ---------------~--------------~~-~-~~~~~lD----a-s~LL~~~~~f~p~~~~~~~~~~p~Dpr~l~Tl 277 (472)
T 1gai_A 234 ---------------A--------------NF-D-SSRSGKD----T-NTLLGSIHTFDPEAGCDDSTFQPCSPRALANH 277 (472)
T ss_dssp ---------------S--------------EE-S-CCSCCCC----T-HHHHHHHTTCCTTCCSCTTTTCTTSHHHHHHH
T ss_pred ---------------e--------------ec-C-CCCCCcC----H-HHHHhhhccCCccccccccCCCCCCHHHHHHH
Confidence 0 00 0 0111223 2 1122222222 1334555556
Q ss_pred HHHHHhHHHhhccCCCcccCCCcCCCCceeecCCCCCCCCCccccCCCccchHHHHHHHHHH------------------
Q 006488 482 DLIEAKWAELVADMPLKICYPALEGQEWRIITGSDPKNTPWSYHNGGSWPTLLWQLTVACIK------------------ 543 (643)
Q Consensus 482 ~~l~~~w~~L~tp~gLR~l~P~~~~~~wr~~~~gd~~~~P~sYHNG~VWP~l~~~~a~Al~k------------------ 543 (643)
+.|+. +|..-||+..-.| .+-.+ +=.+|..-.|..|+.|.--.--++.+|.+
T Consensus 278 ~ai~~---~L~~~y~i~~~~~----~g~g~---~v~RY~~D~y~gg~pw~lcT~wlae~l~~a~~~~~~~~~i~~~~~~~ 347 (472)
T 1gai_A 278 KEVVD---SFRSIYTLNDGLS----DSEAV---AVGRYPEDSYYNGNPWFLCTLAAAEQLYDALYQWDKQGSLEITDVSL 347 (472)
T ss_dssp HHHHH---TTTTTCGGGTTCC----TTSCC---CCCSCTTCCGGGSCCBHHHHHHHHHHHHHHHHHHHHHTEEEECTTTH
T ss_pred HHHHH---HHHHhcCcCCCCc----Ccccc---eEEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHHhhccCceeecchhH
Confidence 66654 4543333321000 00000 11223333567799998776666666542
Q ss_pred -----------cC----------CHHH-----HHHHHHHHHHHhcCCC-CCccccCCCCCCCCCCCCccchHHHHHHHHH
Q 006488 544 -----------MN----------RVEI-----AEKAVKLAERHISGDK-WPEYYDTKRGRFIGKQSRLYQTWSIAGYLVA 596 (643)
Q Consensus 544 -----------~G----------~~~~-----A~~ll~~~~~~l~~~~-~pE~FDG~~g~p~G~~Ac~~QAWSaA~~L~a 596 (643)
.| +.++ |..+++.+..+-...| +||=||..+|++.|-. ||+||-+++|.+
T Consensus 348 ~ff~~~~~~~~~G~~~~~~~~~~~~~~~~~~~A~~~~e~~~~~~~~~GllsEq~d~~tG~~~gn~---PlawSha~lI~a 424 (472)
T 1gai_A 348 DFFKALYSGAATGTYSSSSSTYSSIVSAVKTFADGFVSIVETHAASNGSLSEQFDKSDGDELSAR---DLTWSYAALLTA 424 (472)
T ss_dssp HHHHHHCTTCCSEEEETTSHHHHHHHHHHHHHHHHHHHHHHHHSCTTCCCCSEECTTTCCEESSS---SCHHHHHHHHHH
T ss_pred HHHHhhcccccccccccCchhHHHHHHHHHHHHHHHHHHHHHHCCCCCCcccccCCCCCCCCCcc---chHHHHHHHHHH
Confidence 45 4444 7777777766655555 7999999899999855 999999999999
Q ss_pred HHHhc
Q 006488 597 KLLLD 601 (643)
Q Consensus 597 ~~lL~ 601 (643)
...+.
T Consensus 425 a~~l~ 429 (472)
T 1gai_A 425 NNRRN 429 (472)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 88776
No 13
>2p0v_A Hypothetical protein BT3781; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacteroides thetaiotaomicron vpi-5482} SCOP: a.102.1.8
Probab=99.35 E-value=5.5e-11 Score=130.50 Aligned_cols=348 Identities=15% Similarity=0.115 Sum_probs=216.1
Q ss_pred hhccccCCcceeeeccCCCCccccCCCccccchhHHHHHHhh--ccCChHHHHHHHHHHHhhhhccccccCCCCCCCCCC
Q 006488 169 SIVYYCGNPVGTIAANDPNDSTILNYDQVFIRDFIPSGIAFL--LKGEYDIVRNFILHTLQLQSWEKTMDCHSPGQGLMP 246 (643)
Q Consensus 169 ~~v~~~~~p~G~~Aa~d~~~a~~~~Y~~vfGRDt~Isalg~L--~~G~peiaR~~L~~~l~LQ~~e~~ld~~q~~~GliP 246 (643)
..|.+.+.|.-||...| -+.-|-||+.-.+.-.| +..++++ +..+......|..--..|+|.-.----|
T Consensus 86 Ttv~~~~~~~tfViTGD--------I~AmWLRDS~~Q~~pYl~l~~~d~~l-~~li~G~i~rq~~~i~~dPYaNAF~~~~ 156 (489)
T 2p0v_A 86 TTVHFDGKEDTFVYTGD--------IHAMWLRDSGAQVWPYVQLANKDPEL-KKMLAGVINRQFKCINIDPYANAFNMNS 156 (489)
T ss_dssp HTEEECSSSCEEECCBS--------SSSEEHHHHHHHSGGGGGGGGGCHHH-HHHHHHHHHHHHHHHHHCTTCSEECSSS
T ss_pred hheeeCCCCCEEEEeCC--------ccchhhcccHHHHHHHHHHhccCHHH-HHHHHHHHHHHHHHhccCccccccCCCC
Confidence 35666677777776522 23689999988877643 5557776 7788888888885555555531100012
Q ss_pred CccccccccCCCCCCCcccccCCCCCCCCCCccCCCChHHHHHHHHHHHHHHhCCHhHHHhhhcHHHHHHHHHHHHh-CC
Q 006488 247 ASFKVRTVPLDGDDSATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLSVQERVDVQTGIKMILKLCLA-DG 325 (643)
Q Consensus 247 ~~fKi~~~~~r~~~~~~~~~l~pd~Ge~a~~~ygsVDAtLWwIial~~Y~~~TGD~afl~~l~~~p~i~~iL~w~l~-~g 325 (643)
++. .+. . ....+.|-.-|. -| .+|+.-.+|.+++.|++.|||.+|+.+. ....++.|++++.. .+
T Consensus 157 ~~~--~~~-~------d~t~~~P~v~E~---Ky-ElDSla~~L~la~~Yy~~TgD~~~f~~~-w~~av~~il~~l~~eq~ 222 (489)
T 2p0v_A 157 EGG--EWM-S------DLTDMKPELHER---KW-EIDSLCYPIRLAYHYWKTTGDASVFSDE-WLQAIANVLKTFKEQQR 222 (489)
T ss_dssp CCC--GGG-G------SSSCCCTTEEEC---CC-CHHHHHHHHHHHHHHHHHHCCCTTSSHH-HHHHHHHHHHHHHHTTC
T ss_pred CCC--CCC-C------CCCCCCcccccc---cc-hhhhhHHHHHHHHHHHHHhCCchhhHHH-HHHHHHHHHHHHHHHhc
Confidence 111 010 0 011222321111 13 8999999999999999999999988763 35899999999985 22
Q ss_pred CCC----CC----ce-----eec---------CCCccccccc----CCCCCchhhHHHHHHHHHHHHhhcCCCCCCHHHH
Q 006488 326 FDM----FP----TL-----LVT---------DGSCMIDRRM----GIHGHPLEIQALFYSALLSAREMLTPEDGSADLI 379 (643)
Q Consensus 326 f~~----~~----~l-----Lv~---------dG~~w~D~r~----~r~G~pVEIQALwY~AL~~aaeLa~~~~g~~~~a 379 (643)
... |. +. +.+ -|..|---|- -+.|+-+-.|++.|.+|+.+++|+..++++.+.+
T Consensus 223 ~~~~~~~Y~F~r~t~~~~dtl~~~G~G~pv~~tGLi~S~fRPSDDa~~yg~~ipSN~~a~v~L~~aaeia~~v~~d~~la 302 (489)
T 2p0v_A 223 KDDAKGPYRFQRKTERALDTMTNDGWGNPVKPVGLIASAFRPSDDATTFQFLVPSNFFAVTSLRKAAEILNTVNRKPALA 302 (489)
T ss_dssp SSCSSCSCCCCCCBSCGGGSCHHHHTCSCCCCSSCCCCSBCTTSCBCSSSEEHHHHHHHHHHHHHHHHHHHHTSCCHHHH
T ss_pred ccCCCCCceEeecCCCcccccccCCCCCccCCCCceeCCCCCCCcchhcCcchHHHHHHHHHHHHHHHHHHHhccCHHHH
Confidence 211 00 00 111 1333322111 4678899999999999999999998776678889
Q ss_pred HHHHHHHHHHHHHHHHHhhhchhhhhhhhhccccchhhhhhcccCCCCCCCCccccccccCCCceeeecccCCccCcccc
Q 006488 380 RALNNRLVALSFHIREYYWIDMKKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEFMPHIGGYLIGNLQPAHMDFRFF 459 (643)
Q Consensus 380 ~~l~~ra~~Lk~~~~~~FW~d~~~l~~iyr~~~e~y~~~a~~~~n~~pdsip~~l~~f~~~~ggYL~~~v~p~~~d~r~~ 459 (643)
+++.+.+..|++.|.++.|++..+.-.+|+|..+.|+ +++. ||- -
T Consensus 303 ~~~~~lA~eI~~gI~~~gv~~~p~~G~ifAyEVDG~G--------------------------~~~~-------mDD--a 347 (489)
T 2p0v_A 303 KECTALADEVEKALKKYAVCNHPKYGKIYAFEVDGFG--------------------------NQLL-------MDD--A 347 (489)
T ss_dssp HHHHHHHHHHHHHHHHHSEEEETTTEEEECSEECSSS--------------------------CEEC-------CCC--S
T ss_pred HHHHHHHHHHHHHHHHhCEecCCCCccEEEEEecCCC--------------------------Cccc-------CCC--C
Confidence 9999999999999999999875333224444333222 1111 221 0
Q ss_pred cccchhhH-hcCCCCH--HHHHHHHHHHHHhHHHhhccCCCcccCCCcCCCCceeecCCCCCCCCCccccCCCccchHHH
Q 006488 460 SLGNLWSV-VSSLATV--DQSHAILDLIEAKWAELVADMPLKICYPALEGQEWRIITGSDPKNTPWSYHNGGSWPTLLWQ 536 (643)
Q Consensus 460 slGN~LAL-~sglld~--eqa~~Vv~~l~~~w~~L~tp~gLR~l~P~~~~~~wr~~~~gd~~~~P~sYHNG~VWP~l~~~ 536 (643)
..+++|++ +.|.++. +.-+.-.+.|++ ++ .||..+- + .-..+. +=|-|.-.||...+
T Consensus 348 nvpSLLslPylG~~~~dDpiy~nTr~~IlS---~~-NPyy~~G--~-----~~~GIG---------spH~~~~~~Wpmsl 407 (489)
T 2p0v_A 348 NVPSLIALPYLGDVKVTDPIYQNTRKFVWS---ED-NPYFFKG--S-----AGEGIG---------GPHIGYDMIWPMSI 407 (489)
T ss_dssp SSSCSTTHHHHTSSCTTCHHHHHHHHHHTS---TT-STTEEEC--S-----SCEEEC---------CTTTCTTEECHHHH
T ss_pred CccHHHHHHHhCCCCCCCHHHHHHHHHHHh---hc-CCccccc--c-----cccCCC---------CCCCCCCchHHHHH
Confidence 23556655 5676544 355555666654 22 2333320 1 001111 12666666777888
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHHhcCCC-CCccccCCCCCCCCCCCCccchHHHHHHHHHHH
Q 006488 537 LTVACIKMNRVEIAEKAVKLAERHISGDK-WPEYYDTKRGRFIGKQSRLYQTWSIAGYLVAKL 598 (643)
Q Consensus 537 ~a~Al~k~G~~~~A~~ll~~~~~~l~~~~-~pE~FDG~~g~p~G~~Ac~~QAWSaA~~L~a~~ 598 (643)
++.| +..+..++++++++.+.+.-...| ++|=||.+++.+.- +.++|||-+.|..+..
T Consensus 408 l~~a-lts~d~~E~~~~L~~l~~t~~gtGLmhEs~d~~~~~~~T---R~wFaWanslF~e~il 466 (489)
T 2p0v_A 408 MMKA-FTSQNDAEIKTCIKMLMDTDAGTGFMHESFNKNDPKNFT---RAWFAWQNTLFGELIL 466 (489)
T ss_dssp HHHH-HTCCCHHHHHHHHHHHHHTSTTSCSCCSEEETTEEEEEE---CSCBHHHHHHHHHHHH
T ss_pred HHHH-HhcCCHHHHHHHHHHHHhhCCCCCeeeeeECCCCCCcCC---CcccHHHHHHHHHHHH
Confidence 8888 457889999999988776444445 59999988865543 4599999998755543
No 14
>2vn4_A Glucoamylase; hydrolase, carbohydrate binding, glycoside hydrolase family 15, amyloglucosidase; HET: MAN NAG BTB; 1.85A {Hypocrea jecorina} PDB: 2vn7_A*
Probab=99.35 E-value=2.6e-10 Score=129.12 Aligned_cols=332 Identities=13% Similarity=0.070 Sum_probs=189.1
Q ss_pred CcceeeeccCCCCccccCCCccccchhHHHHHHhh----ccCChHHHHHHHHHHH---hhhhccccccCCCCCCCCCCCc
Q 006488 176 NPVGTIAANDPNDSTILNYDQVFIRDFIPSGIAFL----LKGEYDIVRNFILHTL---QLQSWEKTMDCHSPGQGLMPAS 248 (643)
Q Consensus 176 ~p~G~~Aa~d~~~a~~~~Y~~vfGRDt~Isalg~L----~~G~peiaR~~L~~~l---~LQ~~e~~ld~~q~~~GliP~~ 248 (643)
.|.|.+.|..+. ..|.|.-+|.||+.+++.+++ ..|..++++.++..+. .+|.+-. ..|-.|..
T Consensus 31 ~~tGaiIAsptt--s~pDYrY~W~RDaa~t~~aL~~~~~~~G~~~~a~~~~~~l~~~~~lQ~~y~-------~~G~~~~~ 101 (599)
T 2vn4_A 31 TSAGAVIASPST--IDPDYYYMWTRDSALVFKNLIDRFTETYDAGLQRRIEQYITAQVTLQGLSN-------PSGSLADG 101 (599)
T ss_dssp SCTTCBCSCSCC--SSSCCCSEEHHHHHHHHHHHHHHHHHSBCHHHHHHHHHHHHHHHHHHHCCB-------TTBCSTTS
T ss_pred CCCceEEEECCC--CCCCCeEEchhhHHHHHHHHHHHHHhCCCHHHHHHHHHHHhcccceeeeeC-------CCCCcccc
Confidence 344555443222 247999999999999999988 8899999999888776 3664211 33433321
Q ss_pred cccccccCCCCCCCcccccCCCCCCC---CCCccCCCCh-----HHHHHHHHHHHHHHhCCHhHHHhhhcHHHHHHHHHH
Q 006488 249 FKVRTVPLDGDDSATEEVLDPDFGEA---AIGRVAPVDS-----GLWWIILLRAYGKCSGDLSVQERVDVQTGIKMILKL 320 (643)
Q Consensus 249 fKi~~~~~r~~~~~~~~~l~pd~Ge~---a~~~ygsVDA-----tLWwIial~~Y~~~TGD~afl~~l~~~p~i~~iL~w 320 (643)
+.+.+| +...+ |.. +.++ -.-|. +-..+.+++ +..+|+.++++. .+++.++.++++
T Consensus 102 -~~l~E~----------~~~ld-G~~~~~~w~~-~Q~D~~glr~~~~~~~~~~--~~~~g~~~~~~~-~~w~~v~~~l~~ 165 (599)
T 2vn4_A 102 -SGLGEP----------KFELT-LKPFTGNWGR-PQRDGPALRAIALIGYSKW--LINNNYQSTVSN-VIWPIVRNDLNY 165 (599)
T ss_dssp -GGGGCC----------EECTT-SCBCCSCCSC-CCTHHHHHHHHHHHHHHHH--HHHTTCHHHHHH-HTHHHHHHHHHH
T ss_pred -cCcCce----------EEecC-CccccCcCCC-eeccccchhHHHHHHHHHH--HHHhCCcccccH-HHHHHHHHHHHH
Confidence 111110 00011 111 1111 13444 445555555 567899988765 259999999999
Q ss_pred HHhCCCCCCCceeecCCCcccccccCCCCCchhhHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhc
Q 006488 321 CLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALLSAREMLTPEDGSADLIRALNNRLVALSFHIREYYWID 400 (643)
Q Consensus 321 ~l~~gf~~~~~lLv~dG~~w~D~r~~r~G~pVEIQALwY~AL~~aaeLa~~~~g~~~~a~~l~~ra~~Lk~~~~~~FW~d 400 (643)
+.... ..++-.-|=.+ .|+-....+.-+.||.++++|++.++.. +..+.+.+..|+..| ++||.+
T Consensus 166 v~~~w-------~~~d~dlWEer----~g~~~~T~~~~~~aL~~aa~lA~~~g~~---~~~w~~~ad~i~~~i-~~~w~~ 230 (599)
T 2vn4_A 166 VAQYW-------NQTGFDLWEEV----NGSSFFTVANQHRALVEGATLAATLGQS---GSAYSSVAPQVLCFL-QRFWVS 230 (599)
T ss_dssp HHHHT-------TSCEECTTSCC----EEEEHHHHHHHHHHHHHHHHHHHHHTCC---CHHHHHHHHHHHHHH-GGGEET
T ss_pred HHHhC-------CCCCCCeeeec----CCcchHHHHHHHHHHHHHHHHHHHcCCC---HHHHHHHHHHHHHHH-HhhcCC
Confidence 98521 11332335433 3456678899999999999999875443 456777788888888 889976
Q ss_pred hhhhhhhhhccccchhhhhhcccCCCCCCCCccccccccCCCceeeecccCCccCcccccccchhhHhcCC---------
Q 006488 401 MKKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEFMPHIGGYLIGNLQPAHMDFRFFSLGNLWSVVSSL--------- 471 (643)
Q Consensus 401 ~~~l~~iyr~~~e~y~~~a~~~~n~~pdsip~~l~~f~~~~ggYL~~~v~p~~~d~r~~slGN~LAL~sgl--------- 471 (643)
+ +.|... |.-++-.....| + ..+|+...+.
T Consensus 231 ~-g~f~~~-----------------------------------~~~~~~~~~~lD----a-s~LL~~~~~f~~~~~~~~~ 269 (599)
T 2vn4_A 231 S-GGYVDS-----------------------------------NINTNEGRTGKD----V-NSVLTSIHTFDPNLGCDAG 269 (599)
T ss_dssp T-TTEECS-----------------------------------EESSCCCCCCCB----T-HHHHHHHHSCCGGGTTCTT
T ss_pred C-CCEEEE-----------------------------------ecCccCCCCCcC----H-HHHhhhhccCCcccccccc
Confidence 4 321110 000000111223 2 1123222222
Q ss_pred ---CCHHHHHHHHHHHHHhHHHhhccCCCcccCCCcCCCCceeecCCCCCCCCCccccCCCccchHHHHHHHHHH-----
Q 006488 472 ---ATVDQSHAILDLIEAKWAELVADMPLKICYPALEGQEWRIITGSDPKNTPWSYHNGGSWPTLLWQLTVACIK----- 543 (643)
Q Consensus 472 ---ld~eqa~~Vv~~l~~~w~~L~tp~gLR~l~P~~~~~~wr~~~~gd~~~~P~sYHNG~VWP~l~~~~a~Al~k----- 543 (643)
++..+...-++.|+. +|..-||+..-.| .+-.+ +-.+|..-.|..|+.|.--.--++.+|.+
T Consensus 270 ~~~p~dpr~l~Tl~ai~~---~L~~~y~i~~g~~----~g~~~---~v~RY~~D~y~Gg~pw~lcT~w~ae~l~~a~~~~ 339 (599)
T 2vn4_A 270 TFQPCSDKALSNLKVVVD---SFRSIYGVNKGIP----AGAAV---AIGRYAEDVYYNGNPWYLATFAAAEQLYDAIYVW 339 (599)
T ss_dssp TTCTTSHHHHHHHHHHHH---HHHTTCGGGTTCC----TTSCC---CCCSBTTCCGGGCCCBHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHH---HHHhhcCcCCCCc----CCcee---EEEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhh
Confidence 134466666666664 5643333331000 00000 11123333455688887664444444332
Q ss_pred ------------------------cCCH----------H-----HHHHHHHHHHHHhcCCC-CCccccCCCCCCCCCCCC
Q 006488 544 ------------------------MNRV----------E-----IAEKAVKLAERHISGDK-WPEYYDTKRGRFIGKQSR 583 (643)
Q Consensus 544 ------------------------~G~~----------~-----~A~~ll~~~~~~l~~~~-~pE~FDG~~g~p~G~~Ac 583 (643)
.|+. + .|..+++.+..+-...| +||=||..+|++.|-.
T Consensus 340 ~~~g~i~~~~~~~~ff~~~~~~~~~G~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~a~~~GllsEqvd~~~G~~~gn~-- 417 (599)
T 2vn4_A 340 KKTGSITVTATSLAFFQELVPGVTAGTYSSSSSTFTNIINAVSTYADGFLSEAAKYVPADGSLAEQFDRNSGTPLSAL-- 417 (599)
T ss_dssp HHHTEEEECTTTHHHHHHHSTTCCSEEEETTSHHHHHHHHHHHHHHHHHHHHHHTTSCTTCCCCSEECTTTCCEESSS--
T ss_pred hccCceeeccchhHHHhhhcccccccccccCchhHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCCCCccCCcc--
Confidence 3422 2 26666666655444444 7999999999998855
Q ss_pred ccchHHHHHHHHHHHHhc
Q 006488 584 LYQTWSIAGYLVAKLLLD 601 (643)
Q Consensus 584 ~~QAWSaA~~L~a~~lL~ 601 (643)
||+||-|++|.+...+.
T Consensus 418 -PlawSha~lI~a~~~~~ 434 (599)
T 2vn4_A 418 -HLTWSYASFLTATARRA 434 (599)
T ss_dssp -SCHHHHHHHHHHHHHHT
T ss_pred -hHHHHHHHHHHHHHHHh
Confidence 99999999999887765
No 15
>3qry_B Putative uncharacterized protein; alpha-alpha six fold, glycoside hydrolase, mannosidase, 1- deoxymannojirimycin, hydrolase; HET: DMJ; 1.75A {Streptococcus pneumoniae} SCOP: a.102.1.0 PDB: 3qpf_A* 3qsp_A*
Probab=99.05 E-value=1.1e-08 Score=110.55 Aligned_cols=358 Identities=14% Similarity=0.047 Sum_probs=219.8
Q ss_pred chHHHHHHHHHHHhhccccCCcceeeeccCCCCccccCCCccccchhHHHHHHh--hccCChHHHHHHHHHHHhhhhccc
Q 006488 156 KSVEDEAWDLLRESIVYYCGNPVGTIAANDPNDSTILNYDQVFIRDFIPSGIAF--LLKGEYDIVRNFILHTLQLQSWEK 233 (643)
Q Consensus 156 ~~~~~~A~~~Lr~~~v~~~~~p~G~~Aa~d~~~a~~~~Y~~vfGRDt~Isalg~--L~~G~peiaR~~L~~~l~LQ~~e~ 233 (643)
..|++.++--=-..+|.+.+.+.-||...| =+.-|-||+.-.+.-. |+..++++ ++.++.....|..--
T Consensus 26 ~~lF~n~~pnTldTtv~~~~~~~tFviTGD--------I~AmWLRDS~~Ql~pY~~l~~~d~~l-~~li~G~I~rQ~~~i 96 (426)
T 3qry_B 26 VDVFERCYTDTLDNTVEILEDGSTFVLTGD--------IPAMWLRDSTAQLRPYLHVAKRDALL-RQTIAGLVKRQMTLV 96 (426)
T ss_dssp HHHHHHHHHHHHHHSEEECTTSCEEECSSS--------SSEEEHHHHHHHHGGGHHHHTTCHHH-HHHHHHHHHHHHHHH
T ss_pred HHHHHHhccchhhheeEecCCCCEEEEeCC--------CcchhhccCHHHHHHhHHHhccCHHH-HHHHHHHHHHHHHHh
Confidence 356666665444557888877777887633 2378999999655543 56667776 778888888888544
Q ss_pred cccCCCCCCCCCCCccccccccCCCCCCCcccccCCCCCCCCCCccCCCChHHHHHHHHHHHHHHhCCHhHHHhhhcHHH
Q 006488 234 TMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLSVQERVDVQTG 313 (643)
Q Consensus 234 ~ld~~q~~~GliP~~fKi~~~~~r~~~~~~~~~l~pd~Ge~a~~~ygsVDAtLWwIial~~Y~~~TGD~afl~~l~~~p~ 313 (643)
..|+|.-.----|+.- .+. ..+ .+.....-+.+--.+|+--.+|.+.+.|++.|||.+|..+ +...+
T Consensus 97 ~~dPYaNAF~~~~~~~--~~~--------~~d--~t~~~~~v~E~KyElDSL~~~l~La~~y~~~Tgd~~~f~~-~w~~a 163 (426)
T 3qry_B 97 LKDPYANSFNIEENWK--GHH--------ETD--HTDLNGWIWERKYEVDSLCYPLQLAYLLWKETGETSQFDE-IFVAA 163 (426)
T ss_dssp HHCTTCSEEESSSCCC--SST--------TTE--ESCCCTTEEECCCCHHHHHHHHHHHHHHHHHHCCCTTCSH-HHHHH
T ss_pred ccCcccccCCCCCCCC--Ccc--------CCC--CCCCCCeeEeeccHHhhhHHHHHHHHHHHHhhCChhhhhH-HHHHH
Confidence 4455431000001100 000 000 0111111122333899999999999999999999998765 45888
Q ss_pred HHHHHHHHHhC-CCCCCCce-----------eec---------CCCcccccc----cCCCCCchhhHHHHHHHHHHHHhh
Q 006488 314 IKMILKLCLAD-GFDMFPTL-----------LVT---------DGSCMIDRR----MGIHGHPLEIQALFYSALLSAREM 368 (643)
Q Consensus 314 i~~iL~w~l~~-gf~~~~~l-----------Lv~---------dG~~w~D~r----~~r~G~pVEIQALwY~AL~~aaeL 368 (643)
++.||+-+..+ ++...+-- +.+ -|..|-.-| --..|+.|--|+++.-+|+.+++|
T Consensus 164 ~~~il~~~~~eq~~~~s~Y~f~R~t~~~tdtl~~~G~G~pv~~tGli~S~FRPSDDa~~~~~~iPsN~~~~v~L~~~aei 243 (426)
T 3qry_B 164 TKEILHLWTVEQDHKNSPYRFVRDTDRKEDTLVNDGFGPDFAVTGMTWSAFRPSDDCCQYSYLIPSNMFAVVVLGYVQEI 243 (426)
T ss_dssp HHHHHHHHHHTTSGGGCCCCCEECCSCGGGSCHHHHTCSCCCCCSSCCCSBCTTSSBCSSSEEHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCceeeecCCCCCccccCCCCCCCcCCCCceecCCCCCCcccccCCCcHHHHHHHHHHHHHHHH
Confidence 88888888752 22111100 111 133332111 135778899999999999999999
Q ss_pred cC--CCCCCHHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhhhccccchhhhhhcccCCCCCCCCccccccccCCCceee
Q 006488 369 LT--PEDGSADLIRALNNRLVALSFHIREYYWIDMKKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEFMPHIGGYLI 446 (643)
Q Consensus 369 a~--~~~g~~~~a~~l~~ra~~Lk~~~~~~FW~d~~~l~~iyr~~~e~y~~~a~~~~n~~pdsip~~l~~f~~~~ggYL~ 446 (643)
+. ...++.+.++++.+.+..+++.|.+|..++....-.+|+|..+.|+ +++
T Consensus 244 ~~~~~v~~d~~la~~~~~la~eIr~~I~k~gvv~h~~~g~iyAyEVDG~G--------------------------s~~- 296 (426)
T 3qry_B 244 FAALNLADSQSVIADAKRLQDEIQEGIKNYAYTTNSKGEKIYAFEVDGLG--------------------------NAS- 296 (426)
T ss_dssp HHHHTCTTHHHHHHHHHHHHHHHHHHHHHHSEEECTTCCEEECSEECSSS--------------------------CBC-
T ss_pred HHhccccCcHHHHHHHHHHHHHHHHHHHHhcEecCCCcceEEEEEeccCC--------------------------Ccc-
Confidence 97 3456778888999999999999999998876544455655544443 111
Q ss_pred ecccCCccCcccccccchhhH-hcCCCCH--HHHHHHHHHHHHhHHHhhccCCCcccCCCcCCCCceeecCCCCCCCCCc
Q 006488 447 GNLQPAHMDFRFFSLGNLWSV-VSSLATV--DQSHAILDLIEAKWAELVADMPLKICYPALEGQEWRIITGSDPKNTPWS 523 (643)
Q Consensus 447 ~~v~p~~~d~r~~slGN~LAL-~sglld~--eqa~~Vv~~l~~~w~~L~tp~gLR~l~P~~~~~~wr~~~~gd~~~~P~s 523 (643)
-||- -+.+++|++ +.|.++. +.-+.-.+.|++ +. .|| ++.|....--.+
T Consensus 297 ------lmDD--aNvPSLLslPylGf~~~dDpiYqNTrk~IlS---~~-NPy----------------y~~G~~~~GiG~ 348 (426)
T 3qry_B 297 ------IMDD--PNVPSLLAAPYLGYCSVDDEVYQATRRTILS---SE-NPY----------------FYQGEYASGLGS 348 (426)
T ss_dssp ------CCCC--SSSSCSTTTTTTTSSCTTCHHHHHHHHHHTS---TT-STT----------------EEECSSCEEECC
T ss_pred ------ccCC--CCchhHHHHHHcCCCCCCCHHHHHHHHHHhc---cc-CCc----------------eeccCccCcCCC
Confidence 1221 133666666 5666543 344444444443 11 111 222222222235
Q ss_pred cccCCCccchHHHHHHHHHHcCCHHHHHHHHHHHHHHhcCCC-CCccccCCCCCCCCCCCCccchHHHHHHH
Q 006488 524 YHNGGSWPTLLWQLTVACIKMNRVEIAEKAVKLAERHISGDK-WPEYYDTKRGRFIGKQSRLYQTWSIAGYL 594 (643)
Q Consensus 524 YHNG~VWP~l~~~~a~Al~k~G~~~~A~~ll~~~~~~l~~~~-~pE~FDG~~g~p~G~~Ac~~QAWSaA~~L 594 (643)
-|.|.-.||...+++.++- .+..+++++.+..+.+.-...| +.|=||..++... .+..+||+=+.|-
T Consensus 349 PH~~~~~~Wpmsl~~~~lT-s~d~~Ei~~~L~~l~~t~~gtGlmHEsvd~~~~~~~---TR~WFaWaN~lF~ 416 (426)
T 3qry_B 349 SHTFYRYIWPIALSIQGLT-TRDKAEKKFLLDQLVACDGGTGVMHESFHVDDPTLY---SREWFSWANMMFC 416 (426)
T ss_dssp TTSCTTEECHHHHHHHHHT-CSCHHHHHHHHHHHHHTSTTSSSCCSEEETTEEEEE---ECSCCHHHHHHHH
T ss_pred CCCCCCCchHHHHHHHHHh-CCCHHHHHHHHHHHHhcCCCCCeeeeeECCCCCCcc---CCCchhhhhHHHH
Confidence 5999888898999877754 3567888888887766444445 5999998774333 3559999988763
No 16
>3p2c_A Putative glycosyl hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE PGE; 1.60A {Bacteroides ovatus} SCOP: a.102.1.8 PDB: 3on6_A*
Probab=99.04 E-value=5.1e-09 Score=114.31 Aligned_cols=347 Identities=14% Similarity=0.105 Sum_probs=214.5
Q ss_pred hhccccC----CcceeeeccCCCCccccCCCccccchhHHHHHHhh--ccCChHHHHHHHHHHHhhhhccccccCCCCCC
Q 006488 169 SIVYYCG----NPVGTIAANDPNDSTILNYDQVFIRDFIPSGIAFL--LKGEYDIVRNFILHTLQLQSWEKTMDCHSPGQ 242 (643)
Q Consensus 169 ~~v~~~~----~p~G~~Aa~d~~~a~~~~Y~~vfGRDt~Isalg~L--~~G~peiaR~~L~~~l~LQ~~e~~ld~~q~~~ 242 (643)
.+|.+.+ .|.-||...| =+.-|-||+.-.+.-.+ +..++++ ++.++.....|..--..|+|.-.-
T Consensus 64 TTv~~~~~~~~~~~tFviTGD--------I~AmWLRDS~~Q~~pYl~l~~~d~~l-~~li~G~I~rQ~~~i~~dPYaNAF 134 (463)
T 3p2c_A 64 TTVHFRKGSDGKPDTFVYTGD--------IHAMWLRDSGAQVWPYVQLANSDPEL-KEMLAGVILRQFKCINIDPYANAF 134 (463)
T ss_dssp HTEEEEECTTSCEEEEECCBS--------SCSEEHHHHHHHTGGGGGGGGGCHHH-HHHHHHHHHHHHHHHHHCTTCSEE
T ss_pred hheeeeccCCCCCCEEEEeCC--------CcchhcccCHHHHHHHHHHhccCHHH-HHHHHHHHHHHHHHhccCcccccc
Confidence 3455543 3555666522 23789999988877653 5667776 778888888888543344443110
Q ss_pred CCCCCccccccccCCCCCCCcccccCCCCCCCCCCccCCCChHHHHHHHHHHHHHHhCCHhHHHhhhcHHHHHHHHHHHH
Q 006488 243 GLMPASFKVRTVPLDGDDSATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLSVQERVDVQTGIKMILKLCL 322 (643)
Q Consensus 243 GliP~~fKi~~~~~r~~~~~~~~~l~pd~Ge~a~~~ygsVDAtLWwIial~~Y~~~TGD~afl~~l~~~p~i~~iL~w~l 322 (643)
---|++.. .+. .....+.|- -+.+--.+|+--.+|.+.+.|++.|||.+|..+ +...+++.||+-+.
T Consensus 135 ~~~~~sg~-~~~-------~d~t~~~p~----v~ErKyElDSL~~~l~La~~y~~~Tgd~~~f~~-~w~~a~~~il~~~~ 201 (463)
T 3p2c_A 135 NDGAIPDG-HWM-------SDLTDMKPE----LHERKWEIDSLCYPLRLAYHYWKTTGDASIFNE-EWIQAITNVLKTFK 201 (463)
T ss_dssp CSSCCTTC-TTT-------TSBSCCCTT----EEECCCCHHHHHHHHHHHHHHHHHHCCCTTCSH-HHHHHHHHHHHHHH
T ss_pred CCCCCCCC-ccc-------CCCCCCCCc----EEEEecHhhhhhHHHHHHHHHHHhhCChhhhcH-HHHHHHHHHHHHHH
Confidence 00122110 000 000111121 112323899999999999999999999998765 45888889988887
Q ss_pred hC-CCC-CCC------ce-----eec---------CCCcccccc----cCCCCCchhhHHHHHHHHHHHHhhcCCCCCCH
Q 006488 323 AD-GFD-MFP------TL-----LVT---------DGSCMIDRR----MGIHGHPLEIQALFYSALLSAREMLTPEDGSA 376 (643)
Q Consensus 323 ~~-gf~-~~~------~l-----Lv~---------dG~~w~D~r----~~r~G~pVEIQALwY~AL~~aaeLa~~~~g~~ 376 (643)
.+ +.+ ..+ +. +.+ -|..|-.-| --..|+.|--|++..-+|+.+++|+..+.++.
T Consensus 202 ~~q~~~~~s~Y~f~R~t~~~tdtl~~~G~G~pv~~tGli~S~FRPSDDa~~~~~~iPsN~~a~v~L~~aaei~~~l~~d~ 281 (463)
T 3p2c_A 202 EQQRKDGVGPYKFQRKTERALDTVSNDGLGAPVKPVGLIVSSFRPSDDATTLQFLVPSNFFAVSSLRKAAEILEKVNKKT 281 (463)
T ss_dssp HTTCSSSSCSCCCBCCBSCGGGSCHHHHTCSCCCCSSCCBCSBCTTSCBCSSSEEHHHHHHHHHHHHHHHHHHHHTSCCH
T ss_pred HHhccCCCCCceEeecCCCCCcccCCCCcCCCcCCCCceecCCCCCCcccccCCCcHHHHHHHHHHHHHHHHHHHhccCH
Confidence 42 221 111 00 111 133332111 13577889999999999999999998777788
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhchhhhhhhhhccccchhhhhhcccCCCCCCCCccccccccCCCceeeecccCCccCc
Q 006488 377 DLIRALNNRLVALSFHIREYYWIDMKKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEFMPHIGGYLIGNLQPAHMDF 456 (643)
Q Consensus 377 ~~a~~l~~ra~~Lk~~~~~~FW~d~~~l~~iyr~~~e~y~~~a~~~~n~~pdsip~~l~~f~~~~ggYL~~~v~p~~~d~ 456 (643)
+.++++.+.+..+++.|.+|.+++....-.+|+|..+.|+ ++++ ||-
T Consensus 282 ~la~~~~~lA~eIr~gI~k~gvv~~p~~G~iyAyEVDG~G--------------------------s~~l-------mDD 328 (463)
T 3p2c_A 282 ALSKECKDLAQEVETALKKYAVYNHPKYGKIYAFEVDGFG--------------------------NHHL-------MDD 328 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSEEEETTTEEEECSEECSSS--------------------------CEEC-------CCC
T ss_pred HHHHHHHHHHHHHHHHHHHhCEecCCCCceEEEEEEecCC--------------------------CccC-------CCC
Confidence 8999999999999999999999865443345555444333 1111 221
Q ss_pred ccccccchhhH-hcCCCCH--HHHHHHHHHHHHhHHHhhccCCCcccCCCcCCCCceeecCCCCCCCCCccccCCCccch
Q 006488 457 RFFSLGNLWSV-VSSLATV--DQSHAILDLIEAKWAELVADMPLKICYPALEGQEWRIITGSDPKNTPWSYHNGGSWPTL 533 (643)
Q Consensus 457 r~~slGN~LAL-~sglld~--eqa~~Vv~~l~~~w~~L~tp~gLR~l~P~~~~~~wr~~~~gd~~~~P~sYHNG~VWP~l 533 (643)
-+.+++|++ +.|.++. +.-+.-.+.|++ +. .|| ++.|....--.+-|.|.-.||.
T Consensus 329 --aNvPSLLslPylGf~~~dDpiYqNTrk~IlS---~~-NPy----------------Y~~G~~~~GiG~PH~~~~~~Wp 386 (463)
T 3p2c_A 329 --ANVPSLLAMPYLGDVNVNDPIYQNTRRFVWS---ED-NPY----------------FFKGKAGEGIGGPHIGYDMVWP 386 (463)
T ss_dssp --SSSSCSTTHHHHTSSCTTCHHHHHHHHHHTS---TT-STT----------------EEECSSCEEECCTTTCTTEECH
T ss_pred --CCchhHHHHHHcCCCCCCCHHHHHHHHHHHh---cc-CCc----------------eeccCccccCCCCCCCCCCchH
Confidence 133666766 6677544 333444444443 11 111 2222222222345899888999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHhcCCC-CCccccCCCCCCCCCCCCccchHHHHHHHHH
Q 006488 534 LWQLTVACIKMNRVEIAEKAVKLAERHISGDK-WPEYYDTKRGRFIGKQSRLYQTWSIAGYLVA 596 (643)
Q Consensus 534 ~~~~a~Al~k~G~~~~A~~ll~~~~~~l~~~~-~pE~FDG~~g~p~G~~Ac~~QAWSaA~~L~a 596 (643)
..+++.++ ..+..+++.+.+..+.+.-...| +.|=||..++.+. .+.++||+=+.|.-+
T Consensus 387 msll~~~l-Ts~d~~Ei~~~L~~l~~t~~gtGlmHEsvd~~~~~~~---TR~WFaWaNs~F~el 446 (463)
T 3p2c_A 387 MSIMMKAF-TSQNDAEIKTCIKMLMDTDAGTGFMHESFHKDNPKKF---TRAWFAWQNTLFGEL 446 (463)
T ss_dssp HHHHHHHH-TCCCHHHHHHHHHHHHHTSTTSSSCCSEEETTEEEEE---ECSCBHHHHHHHHHH
T ss_pred HHHHHHHh-ccCCHHHHHHHHHHHHhcCCCCCeeeeeECCCCCCcC---CCCchhhhhHHHHHH
Confidence 99997764 46778899999988777555555 4999998876544 355999999987544
No 17
>3qt9_A Putative uncharacterized protein CPE0426; alpha-alpha six fold, glycoside hydrolase, mannosidase, HYDR; HET: YDR; 2.05A {Clostridium perfringens} SCOP: a.102.1.8 PDB: 3qt3_A* 2nvp_A
Probab=99.02 E-value=1.4e-08 Score=109.92 Aligned_cols=358 Identities=15% Similarity=0.105 Sum_probs=220.3
Q ss_pred chHHHHHHHHHHHhhccccCCcceeeeccCCCCccccCCCccccchhHHHHHHh--hccCChHHHHHHHHHHHhhhhccc
Q 006488 156 KSVEDEAWDLLRESIVYYCGNPVGTIAANDPNDSTILNYDQVFIRDFIPSGIAF--LLKGEYDIVRNFILHTLQLQSWEK 233 (643)
Q Consensus 156 ~~~~~~A~~~Lr~~~v~~~~~p~G~~Aa~d~~~a~~~~Y~~vfGRDt~Isalg~--L~~G~peiaR~~L~~~l~LQ~~e~ 233 (643)
..+++.++--=-..+|.+ +.|.-||...| =+.-|-||+.-.+.-. |+..+++++ ..++.....|..--
T Consensus 29 ~~lF~n~~pnTldTtv~~-~~~~tFviTGD--------I~AmWLRDS~~Ql~pY~~l~~~d~~l~-~li~G~I~rQ~~~i 98 (427)
T 3qt9_A 29 QELFYNCFINTMDTTVEV-SEGDAFVITGD--------IPAMWLRDSTSQVEHYLPFVKEYPELK-AIFTGLINRQVKCI 98 (427)
T ss_dssp HHHHHHHHHHHHHHTEEE-ETTEEEECCBS--------SCSEEHHHHHHHTGGGGGGTTTCGGGH-HHHHHHHHHHHHHH
T ss_pred HHHHHHhcccchhheeEe-CCCCEEEEeCC--------CcchhhccCHHHHhhhHHHhccCHHHH-HHHHHHHHHHHHHh
Confidence 356666665433456777 66777777633 2378999999665543 556677766 67778888888544
Q ss_pred cccCCCCCCCCCCCccccccccCCCCCCCcccccCCCCCCCCCCccCCCChHHHHHHHHHHHHHHhCCHhHHHhhhcHHH
Q 006488 234 TMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLSVQERVDVQTG 313 (643)
Q Consensus 234 ~ld~~q~~~GliP~~fKi~~~~~r~~~~~~~~~l~pd~Ge~a~~~ygsVDAtLWwIial~~Y~~~TGD~afl~~l~~~p~ 313 (643)
..|+|.-.-.--|+.- .|. .+ .++....-+.+--.+|+--.+|.+.+.|++.|||.+|..+ +...+
T Consensus 99 ~~dPYaNAF~~~~~~~--~~~---------~d--~t~~~~~v~ErKyElDSL~~~l~La~~y~~~Tgd~~~f~~-~w~~a 164 (427)
T 3qt9_A 99 FIDPYANAFNKEPNGQ--KWD---------ND--ITKDSPWVWERKYEIDSLCYPVRLIHKYWKESGDETFFNY-DIKKA 164 (427)
T ss_dssp HHCTTCSEECSSSCCC--CSS---------CC--BSCCCTTEEECCCCTHHHHHHHHHHHHHHHHHCCCTTCCH-HHHHH
T ss_pred ccCcccccCCCCCCCc--CcC---------CC--CCCCCCceEeeccHHhhhHHHHHHHHHHHHhhCChhhhhH-HHHHH
Confidence 4455431100011110 000 00 0111111122333899999999999999999999998765 45788
Q ss_pred HHHHHHHHHhCC---------CCCC-----Ccee-------e-cCCCcccccc----cCCCCCchhhHHHHHHHHHHHHh
Q 006488 314 IKMILKLCLADG---------FDMF-----PTLL-------V-TDGSCMIDRR----MGIHGHPLEIQALFYSALLSARE 367 (643)
Q Consensus 314 i~~iL~w~l~~g---------f~~~-----~~lL-------v-~dG~~w~D~r----~~r~G~pVEIQALwY~AL~~aae 367 (643)
++.||+-+..+. |... +++. + +-|..|-.-| --..|+.|--|++..-||+.+++
T Consensus 165 ~~~il~~~~~~q~~~~~s~Y~f~R~t~~~tdtl~~~G~G~pv~~tGli~S~FRPSDDa~~~~~~iPsN~~a~vaL~~~ae 244 (427)
T 3qt9_A 165 FNMIIDLWRVEQYHREKSDYSFQRLNCSVTDTLSHEGLGTPVTYTGMTWSGFRPSDDACEYGYLIPANMFAVVALRYISE 244 (427)
T ss_dssp HHHHHHHHHHGGGHHHHCCCCCBCSSSCGGGSCHHHHTCSCCCCCSSCCCSBCTTSCBCSSSEEHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCCceEeccCCCCCccccCCCCCCCcCCCCceecCCCCCCcccccCCCcHHHHHHHHHHHHHHH
Confidence 888888876421 2211 0110 0 1133332111 13577889999999999999999
Q ss_pred hcCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhhhccccchhhhhhcccCCCCCCCCccccccccCCCceeee
Q 006488 368 MLTPEDGSADLIRALNNRLVALSFHIREYYWIDMKKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEFMPHIGGYLIG 447 (643)
Q Consensus 368 La~~~~g~~~~a~~l~~ra~~Lk~~~~~~FW~d~~~l~~iyr~~~e~y~~~a~~~~n~~pdsip~~l~~f~~~~ggYL~~ 447 (643)
|+..+.++.+.++++.+.+..+++.|.+|..++....-.+|+|..+.|+ ++++
T Consensus 245 i~~~l~~d~~La~~~~~la~eIr~aI~k~gvv~~p~~G~iyAyEVDG~G--------------------------s~~l- 297 (427)
T 3qt9_A 245 IAEKVYKDEELKEKADSLREEIDNAIEKHGKVYKEGFGEVYAYETDGMG--------------------------NYNF- 297 (427)
T ss_dssp HHHHTSCCHHHHHHHHHHHHHHHHHHHHHSEEEETTTEEEECSEECSSS--------------------------CEEC-
T ss_pred HHHHhccCHHHHHHHHHHHHHHHHHHHHhcEecCCCcceEEEEEeccCC--------------------------Cccc-
Confidence 9987667788899999999999999999998875544455555544333 1111
Q ss_pred cccCCccCcccccccchhhH-hcCCCCH--HHHHHHHHHHHHhHHHhhccCCCcccCCCcCCCCceeecCCCCCCCCCcc
Q 006488 448 NLQPAHMDFRFFSLGNLWSV-VSSLATV--DQSHAILDLIEAKWAELVADMPLKICYPALEGQEWRIITGSDPKNTPWSY 524 (643)
Q Consensus 448 ~v~p~~~d~r~~slGN~LAL-~sglld~--eqa~~Vv~~l~~~w~~L~tp~gLR~l~P~~~~~~wr~~~~gd~~~~P~sY 524 (643)
||- -+.+++|++ +.|.++. +.-+.-.+.|++ +. .|| ++.|....--.+-
T Consensus 298 ------MDD--aNvPSLLslPylGf~~~dDpiYqNTrk~IlS---~~-NPy----------------y~~G~~~~GIG~P 349 (427)
T 3qt9_A 298 ------MDD--ANVPSLLSIPYLEYKGIEDEVYQNTRKFILS---KN-NRF----------------FFEGKAAKGIGSP 349 (427)
T ss_dssp ------CCC--SSSSCSTTHHHHTSSCTTCHHHHHHHHHHTS---TT-STT----------------EEECSSCEEECCT
T ss_pred ------cCC--CCchhHHHHHHcCCCCCCCHHHHHHHHHHhc---cc-CCc----------------eeccCccCcCCCC
Confidence 221 133667766 5676543 343444444443 11 111 2222222222355
Q ss_pred ccCCCccchHHHHHHHHHHcCCHHHHHHHHHHHHHHhcCCC-CCccccCCCCCCCCCCCCccchHHHHHHHHH
Q 006488 525 HNGGSWPTLLWQLTVACIKMNRVEIAEKAVKLAERHISGDK-WPEYYDTKRGRFIGKQSRLYQTWSIAGYLVA 596 (643)
Q Consensus 525 HNG~VWP~l~~~~a~Al~k~G~~~~A~~ll~~~~~~l~~~~-~pE~FDG~~g~p~G~~Ac~~QAWSaA~~L~a 596 (643)
|.|.-.||...+++.++ ..+..+++++.+..+.+.-...| +.|=||..++... .+..+||+=+.|--+
T Consensus 350 H~~~~~~Wpmsl~~~~l-Ts~d~~Ei~~~L~~l~~t~~gtGlmHEsvd~~~~~~~---TR~WFaWaN~lF~el 418 (427)
T 3qt9_A 350 HTPDQYIWHIALSMQGL-TTNNQEEIDQLIKLLKETDAGTGYMHEGFHVDDPTKF---TRDWFAWSNSLFSHF 418 (427)
T ss_dssp TSCTTEEEHHHHHHHHH-TCCCHHHHHHHHHHHHHTSTTSSSCCSEEETTEEEEE---SCSCBHHHHHHHHHH
T ss_pred CCCCCCchHHHHHHHHh-hcCCHHHHHHHHHHHHhcCCCCCeeeeeECCCCCCcc---CCCcchhhhHHHHHH
Confidence 99998899999987775 45678888888888776544445 4999998775433 355999998876433
No 18
>2rdy_A BH0842 protein; PSI-II, structural genomics, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.03A {Bacillus halodurans c-125}
Probab=92.77 E-value=0.29 Score=57.16 Aligned_cols=97 Identities=16% Similarity=0.117 Sum_probs=64.2
Q ss_pred HHHHHHHHHHHHHHhCCHhHHHhhhcHHHHHHHHHHHHhCC-CCCCCceeecCCCcccccc-------cCCCCCchhhHH
Q 006488 285 GLWWIILLRAYGKCSGDLSVQERVDVQTGIKMILKLCLADG-FDMFPTLLVTDGSCMIDRR-------MGIHGHPLEIQA 356 (643)
Q Consensus 285 tLWwIial~~Y~~~TGD~afl~~l~~~p~i~~iL~w~l~~g-f~~~~~lLv~dG~~w~D~r-------~~r~G~pVEIQA 356 (643)
+.|...++++|+++|||.+|+++. ..|-|+.+.+++..-. ++. ..-++..++.--|.. ....-.+...|+
T Consensus 450 ~awla~~lw~yy~~TgD~~fL~~~-~~p~l~e~A~F~~~~l~~~~-~g~y~i~p~~sPE~~~~~~g~~~~~~~n~tytn~ 527 (803)
T 2rdy_A 450 GVWLTQHLWEHYTFGEDEAYLRDT-AYPIMKEAALFCLDWLIENE-AGYLVTSPSTSPEQRFRIGEKGYAVSSATTMDLS 527 (803)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHT-HHHHHHHHHHHHHHHCEECT-TSCEECSSBCBTTBCEEETTEEECCBSCCHHHHH
T ss_pred HHHHHHHHHHHHHhhCCHHHHHhh-chHHHHHHHHHHHHhhEECC-CCcEEECCCCcccccccCCCcccccccChHHHHH
Confidence 578889999999999999999982 4999999999998521 111 111222222111110 011113689999
Q ss_pred HHHHHHHHHHhhcCCCCCCHHHHHHHH
Q 006488 357 LFYSALLSAREMLTPEDGSADLIRALN 383 (643)
Q Consensus 357 LwY~AL~~aaeLa~~~~g~~~~a~~l~ 383 (643)
++...|+.+.++++.++-+.++.++++
T Consensus 528 ~~~~~l~~a~~a~~~Lg~~~~~~~~w~ 554 (803)
T 2rdy_A 528 LIAECFDNCIQAAKRLSIDEDFVKALS 554 (803)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCcCHHHHHHHH
Confidence 999999999999887765655444444
No 19
>1h54_A Maltose phosphorylase; hydrolase, maltose metabolism; 2.15A {Lactobacillus brevis} SCOP: a.102.1.4 b.30.5.3
Probab=92.39 E-value=0.38 Score=55.90 Aligned_cols=84 Identities=13% Similarity=0.023 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHHHhCCHhHHHhhhcHHHHHHHHHHHHhCC-CCCCCceeecCCCccccccc--CCCCCchhhHHHHHHH
Q 006488 285 GLWWIILLRAYGKCSGDLSVQERVDVQTGIKMILKLCLADG-FDMFPTLLVTDGSCMIDRRM--GIHGHPLEIQALFYSA 361 (643)
Q Consensus 285 tLWwIial~~Y~~~TGD~afl~~l~~~p~i~~iL~w~l~~g-f~~~~~lLv~dG~~w~D~r~--~r~G~pVEIQALwY~A 361 (643)
+.|...++++|+++|||.+|+++. ..|-|+.+-+++.+-. ++....-++-.| .+.++- ..--.+...|+++...
T Consensus 429 ~a~ia~a~~~yy~~T~D~~fL~~~-g~~~l~e~A~Fw~s~~~~~~~~g~y~i~~--VtgPdEy~e~v~nn~ytn~~a~~~ 505 (754)
T 1h54_A 429 NGDIAFAIYNYTRYTGDDSYVLHE-GAKVLTEISRFWADRVHFSKRNNQYMIHG--VTGADEYENNVDNNWDTNMLAQWT 505 (754)
T ss_dssp HHHHHHHHHHHHHHHCCCTTTTTH-HHHHHHHHHHHHHHHCEEETTTTEEECCS--BCCSSTTSCSBSCCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhcCCHHHHHhC-ChHHHHHHHHHHHHheEEeCCCCEEEEcc--ccCcccccCCCCCcHHHHHHHHHH
Confidence 578888899999999999999763 4888888888887421 111111110000 011100 0012357899999999
Q ss_pred HHHHHhhcCC
Q 006488 362 LLSAREMLTP 371 (643)
Q Consensus 362 L~~aaeLa~~ 371 (643)
|+.+.++++.
T Consensus 506 l~~a~~~~~~ 515 (754)
T 1h54_A 506 LKYTLEILGK 515 (754)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHHH
Confidence 9999999854
No 20
>2eab_A Alpha-fucosidase; glycoside hydrolase; 1.12A {Bifidobacterium bifidum} PDB: 2eac_A* 2ead_A* 2eae_A*
Probab=91.53 E-value=1.5 Score=52.05 Aligned_cols=85 Identities=15% Similarity=0.019 Sum_probs=52.5
Q ss_pred HHHHHHHHHHHHHHhCCHhHHHhhhcHHHHHHHHHHHHh-CC-CCCC--CceeecCCCcccccccCC-CCCchhhHHHHH
Q 006488 285 GLWWIILLRAYGKCSGDLSVQERVDVQTGIKMILKLCLA-DG-FDMF--PTLLVTDGSCMIDRRMGI-HGHPLEIQALFY 359 (643)
Q Consensus 285 tLWwIial~~Y~~~TGD~afl~~l~~~p~i~~iL~w~l~-~g-f~~~--~~lLv~dG~~w~D~r~~r-~G~pVEIQALwY 359 (643)
..|....+++|+++|||.+|++.. .|-|+.+.++++. -- ++.. ..-++..+++ -..-.+. .-.+...|++..
T Consensus 508 ~aWla~~lweyy~yTgD~~fL~~~--yPlLkeaA~F~~d~~l~~~~~~~~G~~vi~ps~-SPE~~~~~~~~~tydn~l~~ 584 (899)
T 2eab_A 508 VPWILQNVYEAYEYSGDPALLDRV--YALLKEESHFYVNYMLHKAGSSSGDRLTTGVAY-SPEQGPLGTDGNTYESSLVW 584 (899)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHH--HHHHHHHHHHHHHHTCEECCGGGCSSEECSEEE-ETTEEEEEEECCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhCCHHHHHHH--HHHHHHHHHHHHhhheEecCcCCCCeEEEcccc-CCCCCCCCCCCcHHHHHHHH
Confidence 578889999999999999999554 9999999999986 21 1110 1111111110 0000001 112457888888
Q ss_pred HHHHHHHhhcCCC
Q 006488 360 SALLSAREMLTPE 372 (643)
Q Consensus 360 ~AL~~aaeLa~~~ 372 (643)
..|..+.+.++.+
T Consensus 585 ~ll~~~i~aa~~L 597 (899)
T 2eab_A 585 QMLNDAIEAAKAK 597 (899)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHh
Confidence 8888777666433
No 21
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=87.16 E-value=10 Score=39.17 Aligned_cols=101 Identities=5% Similarity=-0.240 Sum_probs=53.4
Q ss_pred CChHHHHHHHHHHHHHH-hCCHhHHHhhhcHHHHHHHHHHHHhCCCCCCCceeecCCCcccccccCCCCCchhhHHHHHH
Q 006488 282 VDSGLWWIILLRAYGKC-SGDLSVQERVDVQTGIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYS 360 (643)
Q Consensus 282 VDAtLWwIial~~Y~~~-TGD~afl~~l~~~p~i~~iL~w~l~~gf~~~~~lLv~dG~~w~D~r~~r~G~pVEIQALwY~ 360 (643)
.|.++. |+++.+-++. |||..+. ...+.+++++++.-.+.. .++... .-.|.........++.||++..
T Consensus 53 ~~nar~-i~~~a~a~~~~~~~~~~~------~~A~~~~~~l~~~~~~~~-Gg~~~~--~d~dg~~~~~~~~~~~~af~i~ 122 (388)
T 2gz6_A 53 WLQNRQ-VWTFSMLCNQLEKRENWL------KIARNGAKFLAQHGRDDE-GNWYFA--LTRGGEPLVQPYNIFSDCFAAM 122 (388)
T ss_dssp HHHHHH-HHHHHHHHHHTCCCHHHH------HHHHHHHHHHHHHSBCTT-SCBCSE--ECTTSCBCCCCCCHHHHHHHHH
T ss_pred HHHHHH-HHHHHHHHHHhcCCHHHH------HHHHHHHHHHHHhcCCCC-CCEEEE--EcCCCCcccCCcchHHHHHHHH
Confidence 344444 4444444556 8998774 446888888886422211 111100 0011111112355789999888
Q ss_pred HHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhc
Q 006488 361 ALLSAREMLTPEDGSADLIRALNNRLVALSFHIREYYWID 400 (643)
Q Consensus 361 AL~~aaeLa~~~~g~~~~a~~l~~ra~~Lk~~~~~~FW~d 400 (643)
||..+.+.. ++++ +.+.|.++...+.++||.+
T Consensus 123 al~~~y~~t----g~~~----~l~~A~~~~~~i~~~~~d~ 154 (388)
T 2gz6_A 123 AFSQYALAS----GEEW----AKDVAMQAYNNVLRRKDNP 154 (388)
T ss_dssp HHHHHHHHH----CCHH----HHHHHHHHHHHHHTC----
T ss_pred HHHHHHHHh----CCHH----HHHHHHHHHHHHHHHhcCC
Confidence 887766653 3333 5556677777888888753
No 22
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=73.23 E-value=79 Score=33.40 Aligned_cols=104 Identities=10% Similarity=-0.085 Sum_probs=58.2
Q ss_pred CCCChHHHHHHHHHHHHHHhCCHhHHHhhhcHHHHHHHHHHHHhCCCCCCCceeecCCCcccccccCCCCCchhhHHHHH
Q 006488 280 APVDSGLWWIILLRAYGKCSGDLSVQERVDVQTGIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFY 359 (643)
Q Consensus 280 gsVDAtLWwIial~~Y~~~TGD~afl~~l~~~p~i~~iL~w~l~~gf~~~~~lLv~dG~~w~D~r~~r~G~pVEIQALwY 359 (643)
..++.++---.....| + +|+..++ ...+.+++++...-++.-..++.. +.-.|...+. .+.++.||+..
T Consensus 49 ~~~~nar~i~~~a~a~-~-~g~~~~l------~~A~~~~~fl~~~~~D~~~GG~~~--s~d~dg~~~~-~k~lyd~Af~i 117 (421)
T 2zbl_A 49 HLWITARMLHVYSVAA-S-MGRPGAY------DLVDHGIKAMNGALRDKKYGGWYA--CVNDQGVVDA-SKQGYQHFFAL 117 (421)
T ss_dssp EHHHHHHHHHHHHHHH-H-TTCTTHH------HHHHHHHHHHTTTTBCTTTSSBCS--EEETTEEEEC-CEEHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHH-H-cCChhHH------HHHHHHHHHHHHhccCcCCCeEEE--EeCCCCCcCC-chhHHHHHHHH
Confidence 3455565533344444 4 9998764 447888899876433321112210 0001112222 47899999999
Q ss_pred HHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhchhh
Q 006488 360 SALLSAREMLTPEDGSADLIRALNNRLVALSFHIREYYWIDMKK 403 (643)
Q Consensus 360 ~AL~~aaeLa~~~~g~~~~a~~l~~ra~~Lk~~~~~~FW~d~~~ 403 (643)
.|+.. .++. +++. +.+.|..+.+.+.++||.+..+
T Consensus 118 ~al~~-~~~t----g~~~----~l~~a~~~~~~l~~~~~d~~~G 152 (421)
T 2zbl_A 118 LGAAS-AVTT----GHPE----ARKLLDYTIEVIEKYFWSEEEQ 152 (421)
T ss_dssp HHHHH-HHTT----TCTT----HHHHHHHHHHHHHHHTEETTTT
T ss_pred HHHHH-HHHh----CCcc----HHHHHHHHHHHHHHHhccCCCC
Confidence 88887 4443 2332 3345556677788899876333
No 23
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=73.18 E-value=99 Score=33.07 Aligned_cols=51 Identities=18% Similarity=0.342 Sum_probs=32.6
Q ss_pred CCccccCCCcc----chHHHHHHHHHHcCC---HHHHHHHHHHHHHHhcCCCCCccccC
Q 006488 521 PWSYHNGGSWP----TLLWQLTVACIKMNR---VEIAEKAVKLAERHISGDKWPEYYDT 572 (643)
Q Consensus 521 P~sYHNG~VWP----~l~~~~a~Al~k~G~---~~~A~~ll~~~~~~l~~~~~pE~FDG 572 (643)
-..|++.+.|. |...-++..+.-.|. .+.|.++.+.+.+++..++.| |||-
T Consensus 235 ~qGy~dds~WaRGqAw~i~gl~~lY~~T~d~~yL~~A~~la~~~l~~~~~d~~p-ywdt 292 (397)
T 2zzr_A 235 RQGYSDESSWARGQAWGIYGIPLSYRKMKDYQQIILFKGMTNYFLNRLPEDKVS-YWDL 292 (397)
T ss_dssp TTSSSTTSCBHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTCCTTSCC-BSBT
T ss_pred ccccCcchhhHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHhCCc-cccC
Confidence 45889999995 565555555555565 456766666677766555544 6654
No 24
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=69.97 E-value=75 Score=33.33 Aligned_cols=95 Identities=7% Similarity=-0.073 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHhCCHhHHHhhhcHHHHHHHHHHHHhCCCCCCCcee---ecCCCcccccccCCCCCchhhHHHHHHHHHH
Q 006488 288 WIILLRAYGKCSGDLSVQERVDVQTGIKMILKLCLADGFDMFPTLL---VTDGSCMIDRRMGIHGHPLEIQALFYSALLS 364 (643)
Q Consensus 288 wIial~~Y~~~TGD~afl~~l~~~p~i~~iL~w~l~~gf~~~~~lL---v~dG~~w~D~r~~r~G~pVEIQALwY~AL~~ 364 (643)
.|.++..-++.+|+..++ ...+.+++++...-++....++ +.||. ....-..++.||+.-.||..
T Consensus 57 ~i~~~a~a~~~~g~~~~l------~~A~~~~~fl~~~~~d~~~Gg~~~~~~dG~------~~~~~~~lyd~Af~i~al~~ 124 (402)
T 3gt5_A 57 FVFNYAMAYLQFGTAEYL------DAVHHGLSYVRDVHRNPATGGYAWTLCDDR------VEDDTNHCYGLAFVMLAYSC 124 (402)
T ss_dssp HHHHHHHHHHHHCCHHHH------HHHHHHHHHHHHTTBCTTTSCBCSEEETTE------EEECCEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCChHHH------HHHHHHHHHHHHhCccCCCCcEEEEeeCCC------CCcCCcchHHHHHHHHHHHH
Confidence 355555556678998774 3467888888764222110111 02221 11122457899988888776
Q ss_pred HHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhchhh
Q 006488 365 AREMLTPEDGSADLIRALNNRLVALSFHIREYYWIDMKK 403 (643)
Q Consensus 365 aaeLa~~~~g~~~~a~~l~~ra~~Lk~~~~~~FW~d~~~ 403 (643)
+. .. ++++ +.+.|.++-..+.++||++..+
T Consensus 125 ~~-~t----gd~~----~l~~A~~l~~~i~~~f~d~~~G 154 (402)
T 3gt5_A 125 GL-KV----GIKQ----AREWMDETWCLLERHFWDAEYG 154 (402)
T ss_dssp HH-HT----TCTT----HHHHHHHHHHHHHHHTEETTTT
T ss_pred HH-Hh----CChh----HHHHHHHHHHHHHHHhcCCcCC
Confidence 33 22 3333 4446667777888999976544
No 25
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=52.14 E-value=91 Score=32.32 Aligned_cols=105 Identities=10% Similarity=-0.025 Sum_probs=61.6
Q ss_pred ChHHHH----HHHHHHHHHHh---CCHhHHHhhhcHHHHHHHHHHHHhCCCCCCCc-eeecCCCcccccccCCCCCchhh
Q 006488 283 DSGLWW----IILLRAYGKCS---GDLSVQERVDVQTGIKMILKLCLADGFDMFPT-LLVTDGSCMIDRRMGIHGHPLEI 354 (643)
Q Consensus 283 DAtLWw----Iial~~Y~~~T---GD~afl~~l~~~p~i~~iL~w~l~~gf~~~~~-lLv~dG~~w~D~r~~r~G~pVEI 354 (643)
+-.+|+ |.+...-++.+ |+..+ ....+.+++++....++.... ++... .-.|...+...+-++.
T Consensus 52 ~k~l~~nar~l~~~a~a~~~~~~~~~~~~------l~~A~~~~~fl~~~~~d~~gg~g~~~s--~d~dg~~~~~~~~lyd 123 (402)
T 1fp3_A 52 LKYVWLQGRQVWMYCRLYRKLERFHRPEL------LDAAKAGGEFLLRHARVAPPEKKCAFV--LTRDGRPVKVQRSIFS 123 (402)
T ss_dssp CEEHHHHHHHHHHHHHHHHHCGGGCCHHH------HHHHHHHHHHHHHHTBSSTTSCCBCSE--ECTTSCEEECCSSSHH
T ss_pred ccchhhhHHHHHHHHHHHHHhcccCCHHH------HHHHHHHHHHHHHhccCcCCCCceEEE--ECCCCCccccccchHH
Confidence 356777 77776656665 98866 445788889988654332211 22100 0011111222456788
Q ss_pred HHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhchhh
Q 006488 355 QALFYSALLSAREMLTPEDGSADLIRALNNRLVALSFHIREYYWIDMKK 403 (643)
Q Consensus 355 QALwY~AL~~aaeLa~~~~g~~~~a~~l~~ra~~Lk~~~~~~FW~d~~~ 403 (643)
||++-.|+..+.+.. ++.+ +.+.|.++-..+.++||++..+
T Consensus 124 ~af~~~a~~~~~~at----gd~~----~~~~A~~l~~~~~~~~~d~~~G 164 (402)
T 1fp3_A 124 ECFYTMAMNELWRVT----AEAR----YQSEAVDMMDQIVHWVREDPSG 164 (402)
T ss_dssp HHHHHHHHHHHHHHH----CCHH----HHHHHHHHHHHHHHHHHTCGGG
T ss_pred HHHHHHHHHHHHHHh----CCHH----HHHHHHHHHHHHHHHhccCCCc
Confidence 999999987766653 3333 4456666777788888854434
No 26
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=41.34 E-value=1.3e+02 Score=31.17 Aligned_cols=103 Identities=12% Similarity=-0.110 Sum_probs=59.2
Q ss_pred cCCCChHHHHHHHHHHHHHHhCCHhHHHhhhcHHHHHHHHHHHHhCCCCCCCceeecCCCcc-cccccCCCCCchhhHHH
Q 006488 279 VAPVDSGLWWIILLRAYGKCSGDLSVQERVDVQTGIKMILKLCLADGFDMFPTLLVTDGSCM-IDRRMGIHGHPLEIQAL 357 (643)
Q Consensus 279 ygsVDAtLWwIial~~Y~~~TGD~afl~~l~~~p~i~~iL~w~l~~gf~~~~~lLv~dG~~w-~D~r~~r~G~pVEIQAL 357 (643)
-++++-++ +++++..+++.|||..+++ ..+++.+|+...-++ +.+++-||.+- .+........=.+-|+.
T Consensus 147 knaisN~~-~~~~la~l~~~tgd~~Yl~------~A~~~~~w~~~~l~d--~~g~v~Dg~~~~~~g~~~~~~~~tYnqg~ 217 (349)
T 3k7x_A 147 KNTPVNAP-FIILSCWLYNELNETKYLE------WAMKTYEWQTKVLVR--EDGFVEDGINRLEDGTIDYEWKFTYNQGV 217 (349)
T ss_dssp EEHHHHHH-HHHHHHHHHHHHCCHHHHH------HHHHHHHHHHHHHBC--TTSCBCCEECTTSSSCBCTTCCCHHHHHH
T ss_pred cchhhHHH-HHHHHHHHHHHhCCHHHHH------HHHHHHHHHHhcCCC--CCCeEecCCccCCCCccCCcCeeeHHHHH
Confidence 35564444 5677778889999998754 367888888752122 22445554321 01101001123567887
Q ss_pred HHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHhh
Q 006488 358 FYSALLSAREMLTPEDGSADLIRALNNRLVALSFHIREYYW 398 (643)
Q Consensus 358 wY~AL~~aaeLa~~~~g~~~~a~~l~~ra~~Lk~~~~~~FW 398 (643)
+..++..+-+.- +++ .+.+++..|...+.++||
T Consensus 218 ~l~g~~~LY~~T----~d~----~yl~~a~~l~~~~~~~f~ 250 (349)
T 3k7x_A 218 YIGANLELYRIT----KEA----IYLDTANKTAAISLKELT 250 (349)
T ss_dssp HHHHHHHHHHHH----CCH----HHHHHHHHHHHHHHHHHE
T ss_pred HHHHHHHHHHhh----CcH----HHHHHHHHHHHHHHHHhc
Confidence 666665444432 344 366677788878878887
No 27
>1w6k_A Lanosterol synthase; cyclase, cholesterol, monotopic membrane protein, B-octyl-glucoside, isomerase, steroid biosynthesis; HET: BOG LAN; 2.1A {Homo sapiens} SCOP: a.102.4.2 a.102.4.2 PDB: 1w6j_A*
Probab=33.07 E-value=6.1e+02 Score=29.06 Aligned_cols=172 Identities=12% Similarity=0.016 Sum_probs=92.6
Q ss_pred ccchHHHHHHHHHHHhhccccCCcceeeeccCCCCccccCC--CccccchhHHHHHHhhccCC------hHHHHHHHHHH
Q 006488 154 WAKSVEDEAWDLLRESIVYYCGNPVGTIAANDPNDSTILNY--DQVFIRDFIPSGIAFLLKGE------YDIVRNFILHT 225 (643)
Q Consensus 154 ~~~~~~~~A~~~Lr~~~v~~~~~p~G~~Aa~d~~~a~~~~Y--~~vfGRDt~Isalg~L~~G~------peiaR~~L~~~ 225 (643)
+.+..+.++++-|.+.++ ..+.|...- .+ ..+| ||..++.++...|. .+.++.++..+
T Consensus 353 ~~~~~~~~~l~~l~~~l~---~~~dG~~~q---------~~~gs~vw--dTalal~AL~~ag~~~~~~~~~~l~ka~~~L 418 (732)
T 1w6k_A 353 PASTAFQEHVSRIPDYLW---MGLDGMKMQ---------GTNGSQIW--DTAFAIQALLEAGGHHRPEFSSCLQKAHEFL 418 (732)
T ss_dssp TTSHHHHHHHHTSGGGEE---EETTEEEEC---------SSSCCHHH--HHHHHHHHHHHTTGGGCGGGHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhhe---eCCCCceeC---------CCCCCchH--HHHHHHHHHHHcCCCcchhhHHHHHHHHHHH
Confidence 566678888877776543 246775543 22 4677 89988888765453 33667777777
Q ss_pred HhhhhccccccCCCCCCCCCCCccccccccCCCCCCCcccccCCCCCCCCC----CccCCCChHHHHHHHHHHHHHHhCC
Q 006488 226 LQLQSWEKTMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDFGEAAI----GRVAPVDSGLWWIILLRAYGKCSGD 301 (643)
Q Consensus 226 l~LQ~~e~~ld~~q~~~GliP~~fKi~~~~~r~~~~~~~~~l~pd~Ge~a~----~~ygsVDAtLWwIial~~Y~~~TGD 301 (643)
+..|..+.. ++ - -..+ .| ++.|.-++ ..+..+|.|..-+.++..+.+..++
T Consensus 419 ~~~Q~~~~~------~d-~-~~~~--r~---------------~~~GGW~f~~~~~~~pd~d~TA~vl~aL~~~~~~~~~ 473 (732)
T 1w6k_A 419 RLSQVPDNP------PD-Y-QKYY--RQ---------------MRKGGFSFSTLDCGWIVSDCTAEALKAVLLLQEKCPH 473 (732)
T ss_dssp HHHSCCCCC------TT-G-GGGT--CC---------------CCTTCCBSSCTTTCCBCHHHHHHHHHHHHHHHHHCTT
T ss_pred HHhcccccC------Cc-c-cccc--cC---------------CCCCeecCCCCCCCCCccccHHHHHHHHHHHhccccc
Confidence 766653210 00 0 0000 01 11111111 1246889999999999988776542
Q ss_pred HhHHHhhhcHHHHHHHHHHHHh-----CCCCCCCceeecCCCccccc--------ccCCCCCchhhHHHHHHHHHHHHhh
Q 006488 302 LSVQERVDVQTGIKMILKLCLA-----DGFDMFPTLLVTDGSCMIDR--------RMGIHGHPLEIQALFYSALLSAREM 368 (643)
Q Consensus 302 ~afl~~l~~~p~i~~iL~w~l~-----~gf~~~~~lLv~dG~~w~D~--------r~~r~G~pVEIQALwY~AL~~aaeL 368 (643)
.. .......++.+++|++. ++|..+... .+..|... +.....--+++.+....||..+.++
T Consensus 474 ~g---~~~~~~~i~~av~wLls~Q~~DGgw~a~~~~---~~~~~l~~i~~~e~fg~~~~d~s~v~~Ta~vL~aL~~~~~~ 547 (732)
T 1w6k_A 474 VT---EHIPRERLCDAVAVLLNMRNPDGGFATYETK---RGGHLLELLNPSEVFGDIMIDYTYVECTSAVMQALKYFHKR 547 (732)
T ss_dssp CC---SCCCHHHHHHHHHHHHTTCCTTSCBCSSSCC---CSCGGGGGGCCCSSCSSCSSCCCBHHHHHHHHHHHHHHHHH
T ss_pred cc---chhhHHHHHHHHHHHHHhcCCCCCEEeecCC---CchHHHhhCcchhcccccccCCCcchHHHHHHHHHHHhccc
Confidence 10 00125568899999984 123222110 11112110 0011112478888888888877765
Q ss_pred cC
Q 006488 369 LT 370 (643)
Q Consensus 369 a~ 370 (643)
..
T Consensus 548 ~~ 549 (732)
T 1w6k_A 548 FP 549 (732)
T ss_dssp CT
T ss_pred cc
Confidence 43
No 28
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=27.77 E-value=2.1e+02 Score=29.27 Aligned_cols=102 Identities=14% Similarity=0.045 Sum_probs=55.2
Q ss_pred CCChHHHHHHHHHHHHHHhCCHhHHHhhhcHHHHHHHHHHHHhCCCCCCCceeecCCCcccccccCCCCCchhhHHHHHH
Q 006488 281 PVDSGLWWIILLRAYGKCSGDLSVQERVDVQTGIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYS 360 (643)
Q Consensus 281 sVDAtLWwIial~~Y~~~TGD~afl~~l~~~p~i~~iL~w~l~~gf~~~~~lLv~dG~~w~D~r~~r~G~pVEIQALwY~ 360 (643)
..+.--++|.++.++++.|||..+++. .+.+++.++..-.+. .++.... +-+.+ +..| .+.++....
T Consensus 113 ~~~~~af~i~al~~~y~~tg~~~~l~~------A~~~~~~i~~~~~d~--~g~~~~~--~~~~~-~~~~--~~~~~~~~~ 179 (388)
T 2gz6_A 113 NIFSDCFAAMAFSQYALASGEEWAKDV------AMQAYNNVLRRKDNP--KGKYTKT--YPGTR-PMKA--LAVPMILAN 179 (388)
T ss_dssp CHHHHHHHHHHHHHHHHHHCCHHHHHH------HHHHHHHHHTC------------------CC-CCEE--THHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHhCCHHHHHH------HHHHHHHHHHHhcCC--CcccCcc--cCCCC-CCCC--CCHHHHHHH
Confidence 344567789999999999999987544 455566665321111 1111110 00111 1112 566666555
Q ss_pred HHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhchhh
Q 006488 361 ALLSAREMLTPEDGSADLIRALNNRLVALSFHIREYYWIDMKK 403 (643)
Q Consensus 361 AL~~aaeLa~~~~g~~~~a~~l~~ra~~Lk~~~~~~FW~d~~~ 403 (643)
|+.. |.+. .++. .+.++|..+-..+.++||.+..+
T Consensus 180 all~---l~~~-t~d~----~~~~~A~~~~~~~~~~~~~~~~g 214 (388)
T 2gz6_A 180 LTLE---MEWL-LPQE----TLENVLAATVQEVMGDFLDQEQG 214 (388)
T ss_dssp HHHH---TGGG-SCHH----HHHHHHHHHHHHHHHTTEETTTT
T ss_pred HHHH---HHHH-cCCH----HHHHHHHHHHHHHHHHHhccCCC
Confidence 5554 4433 2332 46677888888888899875443
No 29
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=24.13 E-value=2.4e+02 Score=29.48 Aligned_cols=93 Identities=14% Similarity=0.025 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHhCCHhHHHhhhcHHHHHHHHHHHHhCCCCCCCceeec----CCCcccccccCCCCCchhhHHHHHHHHH
Q 006488 288 WIILLRAYGKCSGDLSVQERVDVQTGIKMILKLCLADGFDMFPTLLVT----DGSCMIDRRMGIHGHPLEIQALFYSALL 363 (643)
Q Consensus 288 wIial~~Y~~~TGD~afl~~l~~~p~i~~iL~w~l~~gf~~~~~lLv~----dG~~w~D~r~~r~G~pVEIQALwY~AL~ 363 (643)
|.++|.++.+.+||..+++ ..+.+.++....+++....+++. +|... ..-+..-+|+=...|+.
T Consensus 253 ~awlLl~~~~~~~~~~~~~------~A~~l~~~~~~~gwd~~~Gg~~~~~d~~g~~~------~~~k~~W~qaEal~a~l 320 (402)
T 3gt5_A 253 WAKLLLILDRYIEVEWLVP------VARSLFDVAVARSWDAVRGGLCYGFAPDGTIC------DDDKYFWVQAESLAAAA 320 (402)
T ss_dssp HHHHHHHHHHHCCCTTHHH------HHHHHHHHHHHHHBCTTTCSBCSEECTTSCEE------ECCEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCcHHHHH------HHHHHHHHHHHhcccCCCCcEEEEEcCCCCee------eCCcceeHHHHHHHHHH
Confidence 4556667778899987643 35667777776555543333322 12211 11244566776555544
Q ss_pred HHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhc
Q 006488 364 SAREMLTPEDGSADLIRALNNRLVALSFHIREYYWID 400 (643)
Q Consensus 364 ~aaeLa~~~~g~~~~a~~l~~ra~~Lk~~~~~~FW~d 400 (643)
.+.++ .+++. +.+.+.++-..+.++|++.
T Consensus 321 ~ly~~----tgd~~----yl~~a~~~~~~~~~~~~D~ 349 (402)
T 3gt5_A 321 LLATR----SGDER----YWQWYDRLWAYAWQHMVDH 349 (402)
T ss_dssp HHHHH----HCCHH----HHHHHHHHHHHHHHHTBCT
T ss_pred HHHHH----hCCHH----HHHHHHHHHHHHHHhCcCC
Confidence 44444 24443 5556666666677777653
No 30
>1dl2_A Class I alpha-1,2-mannosidase; alpha-alpha helix barrel, hydrolase; HET: NAG NDG BMA MAN; 1.54A {Saccharomyces cerevisiae} SCOP: a.102.2.1 PDB: 1g6i_A*
Probab=20.97 E-value=2.9e+02 Score=30.60 Aligned_cols=147 Identities=15% Similarity=0.001 Sum_probs=75.7
Q ss_pred ccchHHHHHHHHHHHhhccccCCcceeeeccCCCCccccCCCccccchhHHHHHHhh---------ccCChHHHHHHHHH
Q 006488 154 WAKSVEDEAWDLLRESIVYYCGNPVGTIAANDPNDSTILNYDQVFIRDFIPSGIAFL---------LKGEYDIVRNFILH 224 (643)
Q Consensus 154 ~~~~~~~~A~~~Lr~~~v~~~~~p~G~~Aa~d~~~a~~~~Y~~vfGRDt~Isalg~L---------~~G~peiaR~~L~~ 224 (643)
....++++|.++-.+++.-|+.||.|.=-..=+-..+.+.....=++.+.++..+.| .+|++...+.+-+.
T Consensus 122 ~d~~lL~kA~dLadrLlpAFd~TptgiP~~~vnl~~g~~~~~~~~~~~s~~Ae~gSl~LEF~~LS~LTGd~~Y~~~a~r~ 201 (511)
T 1dl2_A 122 NKTVYLNKAIDLGDRLALAFLSTQTGIPYSSINLHSGQAVKNHADGGASSTAEFTTLQMEFKYLAYLTGNRTYWELVERV 201 (511)
T ss_dssp CHHHHHHHHHHHHHHHHGGGGSSSSSCCCSEEETTTCCEECCSSGGGCEEHHHHSSCHHHHHHHHHHHTCHHHHHHHHTT
T ss_pred CcHHHHHHHHHHHHHHHHhhcCCCCCCCCceeecccCCCCCCCCCCcccccccccceeeeHHHHHHHHCChHHHHHHHHH
Confidence 356899999999999998887688775322100001111111111345666666532 36777654443333
Q ss_pred HHhhhhccccccCCCCCCCCCCCccccccccCCCCCCCcccccCCCCCCCCCCccCCCChHHHHHHHHHHHHHHhCCHhH
Q 006488 225 TLQLQSWEKTMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLSV 304 (643)
Q Consensus 225 ~l~LQ~~e~~ld~~q~~~GliP~~fKi~~~~~r~~~~~~~~~l~pd~Ge~a~~~ygsVDAtLWwIial~~Y~~~TGD~af 304 (643)
+-.|...... .....|++|..+-+.+ +... .....++ +.+||- +=.++..|... +|..+
T Consensus 202 ~~~l~~~~~~---~~~~~GL~p~~i~~~t-----------g~~~--~~~~~lG--a~~DS~--YEYLlK~~il~-~d~~y 260 (511)
T 1dl2_A 202 YEPLYKNNDL---LNTYDGLVPIYTFPDT-----------GKFG--ASTIRFG--SRGDSF--YEYLLKQYLLT-HETLY 260 (511)
T ss_dssp HHHHHHHHTH---HHHHTTCCBSEECTTT-----------CCBC--SCCBCSS--TTTHHH--HHHHHHHHHHH-CCHHH
T ss_pred HHHHHhcccc---cCCCCCCcceEEcCCC-----------CCcc--CCeeeec--CCCCcH--HHHHHHHHHhc-CCHHH
Confidence 3322221100 0026799998552111 1100 0011111 345543 45566666655 99888
Q ss_pred HHhhhcHHHHHHHHHHHHh
Q 006488 305 QERVDVQTGIKMILKLCLA 323 (643)
Q Consensus 305 l~~l~~~p~i~~iL~w~l~ 323 (643)
.+.+ ...++.|.+.+..
T Consensus 261 ~~m~--~~a~~~i~~~L~~ 277 (511)
T 1dl2_A 261 YDLY--RKSMEGMKKHLLA 277 (511)
T ss_dssp HHHH--HHHHHHHHHHTEE
T ss_pred HHHH--HHHHHHHHHHhcc
Confidence 7766 7777777777653
No 31
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=20.75 E-value=5.9e+02 Score=26.19 Aligned_cols=80 Identities=9% Similarity=-0.066 Sum_probs=50.5
Q ss_pred HHHHHHHHHHhCCHhHHHhhhcHHHHHHHHHHHHhCCCCCCCceeecCCCcccccccCCCCCchhhHHHHHHHHHHHHhh
Q 006488 289 IILLRAYGKCSGDLSVQERVDVQTGIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALLSAREM 368 (643)
Q Consensus 289 Iial~~Y~~~TGD~afl~~l~~~p~i~~iL~w~l~~gf~~~~~lLv~dG~~w~D~r~~r~G~pVEIQALwY~AL~~aaeL 368 (643)
+-++-+|++.|||.++.+. ++++++++... ++..|.+. + .+.++.|-.|+..+.++
T Consensus 52 ~~~l~d~~~~tgd~~y~~~------a~~~~~~~~~~-----------~~~~~~~~------~-~DD~a~~~la~~~aye~ 107 (349)
T 3k7x_A 52 VEVRLDAYLRTKKQADLEV------AEKTYLHNKNR-----------NGGTLIHD------F-YDDMLWNALAAYRLYKA 107 (349)
T ss_dssp HHHHHHHHHHHCCHHHHHH------HHHHHHHHHHH-----------TTSSSCCS------B-HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHH------HHHHHHHHHhc-----------CCCCCCcc------C-ccHHHHHHHHHHHHHHH
Confidence 3667789999999987543 55666666531 11112211 1 58899999898888887
Q ss_pred cCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhc
Q 006488 369 LTPEDGSADLIRALNNRLVALSFHIREYYWID 400 (643)
Q Consensus 369 a~~~~g~~~~a~~l~~ra~~Lk~~~~~~FW~d 400 (643)
. ++++ +.+.|..+-..+...+|++
T Consensus 108 t----~~~~----yL~~A~~l~~~l~~~~wd~ 131 (349)
T 3k7x_A 108 T----GKSI----YLEDAQLVWQDLVDTGWND 131 (349)
T ss_dssp H----CCHH----HHHHHHHHHHHHHHHTBCS
T ss_pred H----CCch----HHHHHHHHHHHHHHhCCCC
Confidence 5 3343 5556666666664567764
No 32
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=20.18 E-value=7.9e+02 Score=26.02 Aligned_cols=135 Identities=15% Similarity=0.075 Sum_probs=72.6
Q ss_pred hHHHHHHHHHHHhhccccCCcceeeeccCCCCccccCCCccccchhHHHHHHhh----ccCChHHHHHHHHHHHhhhhcc
Q 006488 157 SVEDEAWDLLRESIVYYCGNPVGTIAANDPNDSTILNYDQVFIRDFIPSGIAFL----LKGEYDIVRNFILHTLQLQSWE 232 (643)
Q Consensus 157 ~~~~~A~~~Lr~~~v~~~~~p~G~~Aa~d~~~a~~~~Y~~vfGRDt~Isalg~L----~~G~peiaR~~L~~~l~LQ~~e 232 (643)
.-.+.+++.-+.++..|+ ...|++.+-++. +.++-..+|+ |++..+.++. ..|+++...-+..+...+-.
T Consensus 134 ~~~~~~~~aA~~L~~r~~-~~~g~iqsw~~~--~~~~~~~~iI-D~~mni~~L~~A~~~~gd~~y~~~A~~ha~~~l~-- 207 (397)
T 2zzr_A 134 KALEATIKAADKLMERYQ-EKGGFIQAWGEL--GYKEHYRLII-DCLLNIQLLFFAYEQTGDEKYRQVAVNHFYASAN-- 207 (397)
T ss_dssp HHHHHHHHHHHHHHTTEE-TTTTEECCSSST--TCGGGCEEET-THHHHTHHHHHHHHHHCCHHHHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHHHHhC-cCCCEEEecccC--CCCCCCceee-chHhHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH--
Confidence 345555556666666673 346888874422 1122224444 8887766543 36888776655543332211
Q ss_pred ccccCCCCCCCCCCCccccccccCCCCCCCcccccCCCCCCCCC--CccCCC-Ch-----HHHHHHHHHHHHHHhCCHhH
Q 006488 233 KTMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDFGEAAI--GRVAPV-DS-----GLWWIILLRAYGKCSGDLSV 304 (643)
Q Consensus 233 ~~ld~~q~~~GliP~~fKi~~~~~r~~~~~~~~~l~pd~Ge~a~--~~ygsV-DA-----tLWwIial~~Y~~~TGD~af 304 (643)
. +...+|-.-+.+ ..+|..|+... ..-|-. |+ --|.|.++-+.+++|||..+
T Consensus 208 -~---~~r~dgs~~h~~----------------~~d~~~G~~~~~~t~qGy~dds~WaRGqAw~i~gl~~lY~~T~d~~y 267 (397)
T 2zzr_A 208 -N---VVRDDSSAFHTF----------------YFDPETGEPLKGVTRQGYSDESSWARGQAWGIYGIPLSYRKMKDYQQ 267 (397)
T ss_dssp -H---TBCTTSCBCSEE----------------EECTTTCCEEEEECTTSSSTTSCBHHHHHHHHHHHHHHHHHHCCHHH
T ss_pred -h---CcCCCCCeEEEE----------------EeeCCCCCcccCCcccccCcchhhHHHHHHHHHHHHHHHHHHCCHHH
Confidence 1 111234222222 11234454321 012323 33 48999999999999999998
Q ss_pred HHhhhcHHHHHHHHHHHHh
Q 006488 305 QERVDVQTGIKMILKLCLA 323 (643)
Q Consensus 305 l~~l~~~p~i~~iL~w~l~ 323 (643)
++. .+.+.++++.
T Consensus 268 L~~------A~~la~~~l~ 280 (397)
T 2zzr_A 268 IIL------FKGMTNYFLN 280 (397)
T ss_dssp HHH------HHHHHHHHHH
T ss_pred HHH------HHHHHHHHHH
Confidence 764 3555666664
Done!