Query 006493
Match_columns 643
No_of_seqs 265 out of 1926
Neff 8.4
Searched_HMMs 46136
Date Fri Mar 29 00:04:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006493.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/006493hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03190 aminophospholipid tra 100.0 1.7E-95 4E-100 860.2 56.5 566 34-640 68-648 (1178)
2 KOG0206 P-type ATPase [General 100.0 2.8E-96 6E-101 838.3 37.5 559 33-638 11-572 (1151)
3 TIGR01652 ATPase-Plipid phosph 100.0 1.9E-89 4.2E-94 816.4 54.0 548 54-638 1-552 (1057)
4 KOG0210 P-type ATPase [Inorgan 100.0 1.9E-74 4.2E-79 605.7 34.5 514 36-636 63-581 (1051)
5 COG0474 MgtA Cation transport 100.0 4.7E-65 1E-69 594.8 34.5 428 46-639 49-484 (917)
6 KOG0202 Ca2+ transporting ATPa 100.0 4.2E-65 9E-70 549.7 21.5 475 45-641 27-511 (972)
7 KOG0204 Calcium transporting A 100.0 6.1E-65 1.3E-69 547.6 22.5 441 45-643 123-580 (1034)
8 TIGR01523 ATPase-IID_K-Na pota 100.0 4E-63 8.7E-68 583.8 35.4 481 45-640 30-571 (1053)
9 TIGR01106 ATPase-IIC_X-K sodiu 100.0 1.7E-61 3.7E-66 571.6 35.9 436 45-640 40-496 (997)
10 TIGR01116 ATPase-IIA1_Ca sarco 100.0 5.6E-60 1.2E-64 555.1 38.6 451 74-641 1-465 (917)
11 TIGR01522 ATPase-IIA2_Ca golgi 100.0 1.6E-59 3.5E-64 550.1 37.8 439 45-641 28-475 (884)
12 TIGR01657 P-ATPase-V P-type AT 100.0 1.9E-59 4.2E-64 557.5 39.0 440 46-639 144-597 (1054)
13 TIGR01517 ATPase-IIB_Ca plasma 100.0 5E-60 1.1E-64 557.6 32.5 432 45-640 64-515 (941)
14 PRK10517 magnesium-transportin 100.0 1.2E-56 2.5E-61 522.7 35.7 404 45-640 71-486 (902)
15 TIGR01647 ATPase-IIIA_H plasma 100.0 4.1E-56 8.8E-61 512.2 34.4 385 46-638 6-397 (755)
16 TIGR01524 ATPase-IIIB_Mg magne 100.0 3.9E-56 8.5E-61 518.6 34.6 403 45-640 37-451 (867)
17 PRK15122 magnesium-transportin 100.0 3E-55 6.6E-60 511.6 34.0 416 45-640 49-484 (903)
18 KOG0208 Cation transport ATPas 100.0 1.3E-54 2.9E-59 473.9 30.6 468 45-643 164-650 (1140)
19 KOG0203 Na+/K+ ATPase, alpha s 100.0 6.1E-48 1.3E-52 415.9 17.4 433 48-640 65-518 (1019)
20 KOG0205 Plasma membrane H+-tra 100.0 2.1E-47 4.5E-52 400.3 11.3 386 45-638 40-439 (942)
21 KOG0209 P-type ATPase [Inorgan 100.0 5E-46 1.1E-50 398.4 18.6 430 51-638 173-617 (1160)
22 PRK01122 potassium-transportin 100.0 8E-44 1.7E-48 398.2 33.5 358 75-638 28-404 (679)
23 TIGR01497 kdpB K+-transporting 100.0 2.8E-43 6.1E-48 392.9 34.4 359 75-637 27-404 (675)
24 PRK14010 potassium-transportin 100.0 8.1E-43 1.8E-47 389.8 33.5 353 76-638 28-400 (673)
25 TIGR01494 ATPase_P-type ATPase 100.0 1.4E-41 3.1E-46 377.6 28.9 229 122-437 20-252 (499)
26 TIGR01525 ATPase-IB_hvy heavy 100.0 1.8E-38 3.8E-43 356.3 28.7 231 117-438 29-269 (556)
27 TIGR01511 ATPase-IB1_Cu copper 100.0 7.4E-38 1.6E-42 350.4 26.4 232 111-437 59-299 (562)
28 PRK11033 zntA zinc/cadmium/mer 100.0 3.1E-37 6.6E-42 354.7 31.0 239 111-437 211-458 (741)
29 TIGR01512 ATPase-IB2_Cd heavy 100.0 1.1E-37 2.4E-42 347.7 24.9 246 101-437 17-268 (536)
30 COG2217 ZntA Cation transport 100.0 3.8E-36 8.2E-41 336.4 23.5 244 110-440 178-430 (713)
31 PRK10671 copA copper exporting 100.0 1.9E-35 4.1E-40 346.2 21.9 241 111-438 291-540 (834)
32 KOG0207 Cation transport ATPas 100.0 2.9E-33 6.3E-38 307.2 13.4 251 114-442 349-609 (951)
33 PF00122 E1-E2_ATPase: E1-E2 A 100.0 2.2E-31 4.7E-36 266.7 21.7 222 109-411 2-230 (230)
34 COG2216 KdpB High-affinity K+ 99.9 2E-24 4.3E-29 223.3 18.5 238 109-432 72-316 (681)
35 PF13246 Hydrolase_like2: Puta 99.8 3.1E-19 6.6E-24 150.7 5.9 91 531-639 1-91 (91)
36 smart00831 Cation_ATPase_N Cat 97.4 6.1E-05 1.3E-09 59.0 1.7 47 46-95 15-61 (64)
37 PF00690 Cation_ATPase_N: Cati 97.3 5E-05 1.1E-09 60.5 -0.2 46 45-93 24-69 (69)
38 PF00702 Hydrolase: haloacid d 96.7 0.00074 1.6E-08 66.2 1.6 19 415-433 1-19 (215)
39 KOG4383 Uncharacterized conser 88.3 1.5 3.3E-05 48.8 7.7 37 144-180 162-198 (1354)
40 TIGR01657 P-ATPase-V P-type AT 81.0 35 0.00077 42.0 15.9 20 146-165 250-271 (1054)
41 KOG0210 P-type ATPase [Inorgan 72.4 28 0.0006 39.7 10.3 178 61-245 89-290 (1051)
42 TIGR01116 ATPase-IIA1_Ca sarco 57.8 1.4E+02 0.0029 36.4 13.5 23 145-167 93-115 (917)
43 PF12791 RsgI_N: Anti-sigma fa 52.4 21 0.00045 26.7 3.6 39 134-172 3-42 (56)
44 TIGR01106 ATPase-IIC_X-K sodiu 48.9 1.9E+02 0.0041 35.6 12.9 24 144-167 160-183 (997)
45 COG0474 MgtA Cation transport 48.8 1.1E+02 0.0023 37.3 10.7 168 145-383 160-330 (917)
46 TIGR01517 ATPase-IIB_Ca plasma 48.4 68 0.0015 39.1 9.0 67 100-166 129-207 (941)
47 KOG0208 Cation transport ATPas 43.8 4.2E+02 0.0092 32.0 13.7 82 109-199 217-301 (1140)
48 PF12710 HAD: haloacid dehalog 42.8 13 0.00029 35.1 1.5 14 418-431 1-14 (192)
49 TIGR01647 ATPase-IIIA_H plasma 42.4 1.6E+02 0.0035 34.9 10.7 22 145-166 112-133 (755)
50 smart00831 Cation_ATPase_N Cat 39.7 72 0.0016 24.2 5.0 40 280-319 23-62 (64)
51 TIGR00739 yajC preprotein tran 39.4 58 0.0013 26.8 4.5 7 156-162 38-44 (84)
52 PRK10517 magnesium-transportin 37.0 1.5E+02 0.0032 36.1 9.3 22 145-166 185-206 (902)
53 PF03120 DNA_ligase_OB: NAD-de 35.1 21 0.00046 29.3 1.3 22 151-172 45-67 (82)
54 PRK05585 yajC preprotein trans 30.6 1.1E+02 0.0024 26.4 5.0 11 103-113 18-28 (106)
55 PF02699 YajC: Preprotein tran 29.7 81 0.0018 25.8 3.9 11 155-165 36-46 (82)
56 PF13253 DUF4044: Protein of u 27.9 1.9E+02 0.0042 19.6 4.7 19 288-306 3-21 (35)
57 PF12148 DUF3590: Protein of u 26.5 39 0.00085 27.8 1.5 24 148-171 58-81 (85)
58 PRK11507 ribosome-associated p 26.5 56 0.0012 25.9 2.3 25 141-166 39-63 (70)
59 PF15584 Imm44: Immunity prote 25.3 32 0.0007 28.6 0.8 21 158-178 13-33 (94)
60 PF13275 S4_2: S4 domain; PDB: 24.3 46 0.00099 26.0 1.4 22 144-165 37-58 (65)
61 PF00122 E1-E2_ATPase: E1-E2 A 23.1 1.2E+02 0.0027 29.6 4.7 20 159-178 42-61 (230)
62 PF09926 DUF2158: Uncharacteri 21.7 57 0.0012 24.4 1.4 13 157-169 2-14 (53)
63 smart00306 HintN Hint (Hedgeho 20.1 1.2E+02 0.0025 25.0 3.3 27 138-165 73-99 (100)
No 1
>PLN03190 aminophospholipid translocase; Provisional
Probab=100.00 E-value=1.7e-95 Score=860.16 Aligned_cols=566 Identities=35% Similarity=0.548 Sum_probs=467.0
Q ss_pred CCCeEEEeCCCCccccCCCCCCCceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHHhhcc-CCCCCchhhhHHHHHH
Q 006493 34 GCPRVIYCNQPHMHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTP-LSPFSPVSMLLPLAIV 112 (643)
Q Consensus 34 ~~~r~~~~~~~~~~~~~~~~yg~N~i~~~k~~~~~flp~~l~~~f~~~~~~~~l~~~il~~~~-~~~~~~~~~~~~l~~v 112 (643)
...|.|++|++... ..+.+|++|.|.++||++|+|||+.||+||++++|+|||++++++++| +++.+++++++||+++
T Consensus 68 ~~~r~i~~~~~~~~-~~~~~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~~~~t~~~PL~~v 146 (1178)
T PLN03190 68 EDARLVYLNDPEKS-NERFEFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGASILPLAFV 146 (1178)
T ss_pred CCceEEEcCCCCcc-cccccCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccCCcchHHHHHHHH
Confidence 35899999997422 234579999999999999999999999999999999999999999999 8888999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhcceEEEEEeCCCeEEEeeeeccccCcEEEeccCcccCccEEEEeecCCCCeEEEEccC
Q 006493 113 VGVSMAKEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMN 192 (643)
Q Consensus 113 l~i~~i~~~~~~~~~~k~~~~~n~~~~~V~~r~g~~~~i~~~~LvvGDIV~l~~ge~iPaD~ill~~s~~~g~~~Vdes~ 192 (643)
++++++++++||++|+++|+++|++.++|+ ++|++++++|++|+|||||+|++||.||||++||++++++|.|+||||+
T Consensus 147 l~v~~ike~~Ed~~r~k~d~~~N~~~~~v~-~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~ 225 (1178)
T PLN03190 147 LLVTAVKDAYEDWRRHRSDRIENNRLAWVL-VDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTIN 225 (1178)
T ss_pred HHHHHHHHHHHHHHHHHhHHhhcCcEEEEE-ECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccc
Confidence 999999999999999999999999999999 8999999999999999999999999999999999999999999999999
Q ss_pred CCCccceeeecccccCCCCCchhhhcccceEEEeeCCCCCceEEEEEEEECCeeeccCCCCeEEeceeeecCCeEEEEEE
Q 006493 193 LDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVI 272 (643)
Q Consensus 193 LtGEs~p~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~ni~~rgs~l~~t~~~~gvVv 272 (643)
|||||+|+.|.+++.+... .....++.|.++||.||++++.|.|++.++|+..+++.+|+++|||.|+||+|++|+|+
T Consensus 226 LdGEt~~k~k~~~~~~~~~--~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVV 303 (1178)
T PLN03190 226 LDGESNLKTRYAKQETLSK--IPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAV 303 (1178)
T ss_pred cCCeeeeeEecccchhhhc--chhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEE
Confidence 9999999999987655321 12234578999999999999999999999999999999999999999999999999999
Q ss_pred EeccccceecccCCCCCccChHHHHHHHHHHHHHHHHHHHHHHHHHHhhheeccCCCCccccCCCCCccc-------cCC
Q 006493 273 FTGHDSKVMQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVY-------FNP 345 (643)
Q Consensus 273 ~tG~~Tk~~~~~~~~~~k~s~l~~~~~~~~~~~~~~~l~~~~i~~i~~~~~~~~~~~~~~~l~~~~~~~~-------~~~ 345 (643)
|||++||++++....+.|+|++|+.+|+++.+++++++++|++++++..+|.....+..||+........ ++.
T Consensus 304 YTG~dTK~~~N~~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~ 383 (1178)
T PLN03190 304 YCGRETKAMLNNSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYNY 383 (1178)
T ss_pred EechhhhHhhcCCCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccccccc
Confidence 9999999999999989999999999999999999999999999988877775433344455432110000 000
Q ss_pred CCCchhHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccccccccCCCCceeccCcchhhcccccEEEEcCCCc
Q 006493 346 GKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGT 425 (643)
Q Consensus 346 ~~~~~~~~~~~~~~i~ll~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGT 425 (643)
.......+..|+.+++++..+||++|++++++++++|+++|.+|.+||+++.+.++.||+++.+|+||+|+|||+|||||
T Consensus 384 ~~~~~~~~~~f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGT 463 (1178)
T PLN03190 384 YGWGWEIFFTFLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGT 463 (1178)
T ss_pred chhhHHHHHHHHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCc
Confidence 00112335577788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCceEEEEEEEcCeecCCCCchHHHHHHHHhhhhhhhhhhhhhccccCCCCccchhhhhcccCCCCccccccCCCCcC
Q 006493 426 LTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFE 505 (643)
Q Consensus 426 LT~n~m~v~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 505 (643)
||+|+|+|++|+++|..|+.+....+.... ... ..... ...........
T Consensus 464 LT~N~M~fk~~~i~g~~y~~~~~~~~~~~~-~~~---------------------~~~~~---------~~~~~~~~~~~ 512 (1178)
T PLN03190 464 LTENKMEFQCASIWGVDYSDGRTPTQNDHA-GYS---------------------VEVDG---------KILRPKMKVKV 512 (1178)
T ss_pred cccceEEEEEEEECCEEcccccccchhhhh-ccc---------------------ccccc---------ccccccccccC
Confidence 999999999999999999753221110000 000 00000 00000000011
Q ss_pred cchhcccCC--CCCCChhhHHHHHHHHhhcccccccccCC--C---CceeEecCChhHHHHHHHHHHcCcEEEEecCCeE
Q 006493 506 DSRLMDGNW--LKEPNVDTLLLFFRILAICHTAIPELNEE--T---GNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSV 578 (643)
Q Consensus 506 d~~l~~~~~--~~~~~~~~~~~~~~~lalch~~~~~~~~~--~---~~~~y~~gsp~E~All~~a~~~g~~~~~r~~~~~ 578 (643)
|+.+.+... .+....+.+.+|+.++|+||++.++..++ + +.+.|+++||||.||+++|+++|+.+.+|+++++
T Consensus 513 ~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i 592 (1178)
T PLN03190 513 DPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHI 592 (1178)
T ss_pred CHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCCCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeE
Confidence 111111110 01122345678999999999998853211 1 2467999999999999999999999999999999
Q ss_pred EEEecCCCCCCcceeEEEEEEeecCCCCCceEEEEEEcCCCeEEEEEeccchhhhhhhhccC
Q 006493 579 FIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADRLASPLLFNFL 640 (643)
Q Consensus 579 ~~~~~~~~~g~~~~~~~~il~~~~F~S~rKrMSViv~~~~g~~~l~~KGA~e~Il~~c~~~~ 640 (643)
.+...+ .+..|++++++||+|+||||||||+++++++++|||||||+|+++|++..
T Consensus 593 ~i~~~~------~~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~~KGA~e~il~~~~~~~ 648 (1178)
T PLN03190 593 VIDIHG------ERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGADTSMFSVIDRSL 648 (1178)
T ss_pred EEeecc------ceecceeEEEecccccccEEEEEEEcCCCcEEEEEecCcHHHHHhhcccc
Confidence 887654 26789999999999999999999999889999999999999999998653
No 2
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=100.00 E-value=2.8e-96 Score=838.25 Aligned_cols=559 Identities=59% Similarity=0.990 Sum_probs=504.0
Q ss_pred CCCCeEEEeCCCCccccCCCCCCCceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchhhhHHHHHH
Q 006493 33 QGCPRVIYCNQPHMHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIV 112 (643)
Q Consensus 33 ~~~~r~~~~~~~~~~~~~~~~yg~N~i~~~k~~~~~flp~~l~~~f~~~~~~~~l~~~il~~~~~~~~~~~~~~~~l~~v 112 (643)
++.+|++++|++..++.+..+|..|+|+|+||++++|+|++||+||++++|+|||++++++++|+++.+++++++||++|
T Consensus 11 ~~~~R~~~~n~~~~~~~~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip~~~~~~~~~~~pl~~v 90 (1151)
T KOG0206|consen 11 PGFSRVVYCNDPLPFEAPQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIPLSPFNPYTTLVPLLFV 90 (1151)
T ss_pred CCCceEEeCCCCCcchhhhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCcccccCccceeeceeee
Confidence 46799999999976666777999999999999999999999999999999999999999999998899999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhcceEEEEEeCCCeEEEeeeeccccCcEEEeccCcccCccEEEEeecCCCCeEEEEccC
Q 006493 113 VGVSMAKEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMN 192 (643)
Q Consensus 113 l~i~~i~~~~~~~~~~k~~~~~n~~~~~V~~r~g~~~~i~~~~LvvGDIV~l~~ge~iPaD~ill~~s~~~g~~~Vdes~ 192 (643)
+.++++++++||++|+++|+++|++++.|+++++.+++..|++|+|||+|++..++.+|||++||++++++|.|+|++++
T Consensus 91 l~~t~iKd~~eD~rR~~~D~~iN~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~n 170 (1151)
T KOG0206|consen 91 LGITAIKDAIEDYRRHKQDKEVNNRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETAN 170 (1151)
T ss_pred ehHHHHHHHHhhhhhhhccHHhhcceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEee
Confidence 99999999999999999999999999999943344999999999999999999999999999999999999999999999
Q ss_pred CCCccceeeecccccCCCCCchhhhcccceEEEeeCCCCCceEEEEEEEECCeeeccCCCCeEEeceeeecCCeEEEEEE
Q 006493 193 LDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVI 272 (643)
Q Consensus 193 LtGEs~p~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~ni~~rgs~l~~t~~~~gvVv 272 (643)
||||++++.|.+...+......+.+.++.+.++||.||.++|.|.|++..+++..|++++|+++|||+++||+|++|+|+
T Consensus 171 LDGEtnLK~k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv 250 (1151)
T KOG0206|consen 171 LDGETNLKVKQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVV 250 (1151)
T ss_pred cCCccccceeeehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEE
Confidence 99999999999987776644556677899999999999999999999998887779999999999999999999999999
Q ss_pred EeccccceecccCCCCCccChHHHHHHHHHHHHHHHHHHHHHHHHHHhhheeccCCC---CccccCCCCCccccCCCCCc
Q 006493 273 FTGHDSKVMQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTP---QWWYLKPKETDVYFNPGKPL 349 (643)
Q Consensus 273 ~tG~~Tk~~~~~~~~~~k~s~l~~~~~~~~~~~~~~~l~~~~i~~i~~~~~~~~~~~---~~~~l~~~~~~~~~~~~~~~ 349 (643)
+||++||++++...++.|++.+++.+|..+..++++++++++++++...+|...... ..||+... ...
T Consensus 251 ~tG~dtK~~~n~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~---------~~~ 321 (1151)
T KOG0206|consen 251 FTGHDTKLMQNSGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPS---------EAA 321 (1151)
T ss_pred EcCCcchHHHhcCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCc---------hHH
Confidence 999999999999999999999999999999999999999999999999888764322 46776432 133
Q ss_pred hhHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccccccccCCCCceeccCcchhhcccccEEEEcCCCccccC
Q 006493 350 VPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCN 429 (643)
Q Consensus 350 ~~~~~~~~~~i~ll~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTLT~n 429 (643)
...+..|+++++++..++|++|++++++++.+|+.++++|.+||+++.+.++.+|+++..|+||+|++|++|||||||+|
T Consensus 322 ~~~~~~f~t~~il~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N 401 (1151)
T KOG0206|consen 322 YAGFVHFLTFIILYQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQN 401 (1151)
T ss_pred HHHHHHHHHHHhhhhceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccc
Confidence 45677999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEEEEcCeecCCCCchHHHHHHHHhhhhhhhhhhhhhccccCCCCccchhhhhcccCCCCccccccCCCCcCcchh
Q 006493 430 QMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRL 509 (643)
Q Consensus 430 ~m~v~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 509 (643)
.|+|++|+++|..|+...++.+....++.+.. ..+ ...+++.|.|+++
T Consensus 402 ~M~F~kCsi~g~~yg~~~~~~~~~~~~~~~~~-------------------------------~~~-~~~~~~~f~~~~~ 449 (1151)
T KOG0206|consen 402 SMEFKKCSINGTSYGRNVTEVEAALAKRSGGD-------------------------------VNE-HKIKGFTFEDSRL 449 (1151)
T ss_pred eeeeecccccCcccccCCChhhcccCcccccc-------------------------------ccc-cccccceeccchh
Confidence 99999999999999987765332221110000 011 3345678888888
Q ss_pred cccCCCCCCChhhHHHHHHHHhhcccccccccCCCCceeEecCChhHHHHHHHHHHcCcEEEEecCCeEEEEecCCCCCC
Q 006493 510 MDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQ 589 (643)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~lalch~~~~~~~~~~~~~~y~~gsp~E~All~~a~~~g~~~~~r~~~~~~~~~~~~~~g~ 589 (643)
.++.+...++......|++++|+||++.++.+++.+.+.|++.||||.||+++|+++|+.+..|+++.+.++..+
T Consensus 450 ~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g----- 524 (1151)
T KOG0206|consen 450 VDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESPDEAALVEAARELGFVFLGRTPDSVTIRELG----- 524 (1151)
T ss_pred hccccccccCcchHHHHhhHHhccceeeeccCCCccceeeecCCCcHHHHHHHHHhcCceeeeccCceEEEeccc-----
Confidence 888877777888899999999999999998866556899999999999999999999999999999999998443
Q ss_pred cceeEEEEEEeecCCCCCceEEEEEEcCCCeEEEEEeccchhhhhhhhc
Q 006493 590 PVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADRLASPLLFN 638 (643)
Q Consensus 590 ~~~~~~~il~~~~F~S~rKrMSViv~~~~g~~~l~~KGA~e~Il~~c~~ 638 (643)
.+.+|++|+++||+|+|||||||||+|+|+++|||||||++|++||..
T Consensus 525 -~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~ 572 (1151)
T KOG0206|consen 525 -VEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSK 572 (1151)
T ss_pred -cceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhh
Confidence 368999999999999999999999999999999999999999999974
No 3
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=100.00 E-value=1.9e-89 Score=816.45 Aligned_cols=548 Identities=49% Similarity=0.805 Sum_probs=458.2
Q ss_pred CCCceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHHhhcc-CCCCCchhhhHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 006493 54 YCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTP-LSPFSPVSMLLPLAIVVGVSMAKEALEDWRRFMQDK 132 (643)
Q Consensus 54 yg~N~i~~~k~~~~~flp~~l~~~f~~~~~~~~l~~~il~~~~-~~~~~~~~~~~~l~~vl~i~~i~~~~~~~~~~k~~~ 132 (643)
|++|++.++||++|+|+|+.|++||++++|+|||++++++++| +++.+++++++||+++++++++++++||++|+++++
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~~~~t~~~pL~~v~~~~~~~~~~ed~~r~~~d~ 80 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPTYRGTSIVPLAFVLIVTAIKEAIEDIRRRRRDK 80 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCCCccHhHHhHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 7899999999999999999999999999999999999999999 888899999999999999999999999999999999
Q ss_pred hhcceEEEEEeCC-CeEEEeeeeccccCcEEEeccCcccCccEEEEeecCCCCeEEEEccCCCCccceeeecccccCCCC
Q 006493 133 EVNARKVSVHVGN-GVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRAMEATSPL 211 (643)
Q Consensus 133 ~~n~~~~~V~~r~-g~~~~i~~~~LvvGDIV~l~~ge~iPaD~ill~~s~~~g~~~Vdes~LtGEs~p~~K~~~~~~~~~ 211 (643)
++|++.++|+ |+ |++++++|+||+|||||.|++||.||||++||++++++|.|+||||+|||||+|+.|++...+...
T Consensus 81 ~~n~~~~~v~-~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~~~~~~~ 159 (1057)
T TIGR01652 81 EVNNRLTEVL-EGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQALEETQKM 159 (1057)
T ss_pred HHhCcEEEEE-CCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecchhhhcc
Confidence 9999999999 76 899999999999999999999999999999999999999999999999999999999987665444
Q ss_pred CchhhhcccceEEEeeCCCCCceEEEEEEEECC-eeeccCCCCeEEeceeeecCCeEEEEEEEeccccceecccCCCCCc
Q 006493 212 NEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDR-ELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNATTSPSK 290 (643)
Q Consensus 212 ~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g-~~~~l~~~ni~~rgs~l~~t~~~~gvVv~tG~~Tk~~~~~~~~~~k 290 (643)
.....+..+.|.++|+.||++++.|.|++.+++ ...+++.+|+++|||.++||+|++|+|+|||++|+++++....+.|
T Consensus 160 ~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~n~~~~~~k 239 (1057)
T TIGR01652 160 LDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNATQAPSK 239 (1057)
T ss_pred CChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhhcCCCCccc
Confidence 445566678899999999999999999999988 7789999999999999999999999999999999999999888899
Q ss_pred cChHHHHHHHHHHHHHHHHHHHHHHHHHHhhheeccCCCCccccCCCCCccccCCCCCchhHHHHHHHHHHHHhccccch
Q 006493 291 RSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALILYGYLIPIS 370 (643)
Q Consensus 291 ~s~l~~~~~~~~~~~~~~~l~~~~i~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~ 370 (643)
+|++++.+|+++.+++++++++|++++++..+|........||+..... ........+..++.++++++.++|++
T Consensus 240 ~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~~~~yl~~~~~-----~~~~~~~~~~~~~~~~~L~~~~IPis 314 (1057)
T TIGR01652 240 RSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDVS-----ERNAAANGFFSFLTFLILFSSLIPIS 314 (1057)
T ss_pred ccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCCCccceecCcc-----cccchhHHHHHHHHHHHHHhhhccee
Confidence 9999999999999999999999999988877776544344788753221 11222345568889999999999999
Q ss_pred hHHHHHHHHHHHHHHHhcccccccccCCCCceeccCcchhhcccccEEEEcCCCccccCceEEEEEEEcCeecCCCCchH
Q 006493 371 LYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEV 450 (643)
Q Consensus 371 L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~y~~~~~~~ 450 (643)
|++++++++.+++.++++|.+|++.+..+++++|+++++|+||+|++||+|||||||+|+|+|++|+++|..|+....+.
T Consensus 315 L~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~~~~~ 394 (1057)
T TIGR01652 315 LYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEI 394 (1057)
T ss_pred eeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCCcchH
Confidence 99999999999999999999999877778899999999999999999999999999999999999999999998644321
Q ss_pred HHHHHHHhhhhhhhhhhhhhccccCCCCccchhhhhcccCCCCccccccCCCCcCcchhcccCCCCCCChhhHHHHHHHH
Q 006493 451 ELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRIL 530 (643)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~l 530 (643)
........+... +.+ .. .........+.|+.+.+.....++..+.+.+|+.++
T Consensus 395 ~~~~~~~~~~~~---------------~~~-----------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 447 (1057)
T TIGR01652 395 KDAIRERLGSYV---------------ENE-----------NS-MLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLAL 447 (1057)
T ss_pred HHHhhhcccccc---------------ccc-----------cc-ccccccccccCcHHHHHhhhcCCchhHHHHHHHHHH
Confidence 111110000000 000 00 000000122334333332211223345678899999
Q ss_pred hhcccccccc-cCCCCceeEecCChhHHHHHHHHHHcCcEEEEecCCeEEEEecCCCCCCcceeEEEEEEeecCCCCCce
Q 006493 531 AICHTAIPEL-NEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKR 609 (643)
Q Consensus 531 alch~~~~~~-~~~~~~~~y~~gsp~E~All~~a~~~g~~~~~r~~~~~~~~~~~~~~g~~~~~~~~il~~~~F~S~rKr 609 (643)
++||++.++. +++++.+.|+++||+|.||+++|+.+|+.+..|+++++.+.... .| ....|++++++||+|+|||
T Consensus 448 ~lC~~v~~~~~~~~~~~~~y~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~--~~--~~~~~~il~~~pF~s~rKr 523 (1057)
T TIGR01652 448 ALCHTVVPEFNDDGPEEITYQAASPDEAALVKAARDVGFVFFERTPKSISLLIEM--HG--ETKEYEILNVLEFNSDRKR 523 (1057)
T ss_pred HhcCcccccccCCCCCceEEEccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEe--CC--CEEEEEEEEecccCCCCCe
Confidence 9999998875 22234578999999999999999999999999988854443211 12 2578999999999999999
Q ss_pred EEEEEEcCCCeEEEEEeccchhhhhhhhc
Q 006493 610 MSVIVRDEDGQILLLCKGADRLASPLLFN 638 (643)
Q Consensus 610 MSViv~~~~g~~~l~~KGA~e~Il~~c~~ 638 (643)
|||||+++++++++|||||||+|+++|++
T Consensus 524 mSviv~~~~~~~~l~~KGA~e~il~~~~~ 552 (1057)
T TIGR01652 524 MSVIVRNPDGRIKLLCKGADTVIFKRLSS 552 (1057)
T ss_pred EEEEEEeCCCeEEEEEeCcHHHHHHHhhc
Confidence 99999998889999999999999999974
No 4
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.9e-74 Score=605.67 Aligned_cols=514 Identities=30% Similarity=0.500 Sum_probs=443.2
Q ss_pred CeEEEeCCCCccccCCCCCCCceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHHhhcc-CCCCCchhhhHHHHHHHH
Q 006493 36 PRVIYCNQPHMHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTP-LSPFSPVSMLLPLAIVVG 114 (643)
Q Consensus 36 ~r~~~~~~~~~~~~~~~~yg~N~i~~~k~~~~~flp~~l~~~f~~~~~~~~l~~~il~~~~-~~~~~~~~~~~~l~~vl~ 114 (643)
.|++...... ..++.+|.+|.+...||++++|+|..+++||+.+.|+|||+.++.+++| +......+++.|++++++
T Consensus 63 ~rt~~~~~~~--~~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~ty~~pl~fvl~ 140 (1051)
T KOG0210|consen 63 GRTVNISFGP--HYRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGYLSTYWGPLGFVLT 140 (1051)
T ss_pred CceeecccCC--CcccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecchhhhhHHHHHHHH
Confidence 5666665532 4467899999999999999999999999999999999999999999999 777788899999999999
Q ss_pred HHHHHHHHHHHHHhhhhhhhcceEEEEEeCCCeEEEeeeeccccCcEEEeccCcccCccEEEEeecCCCCeEEEEccCCC
Q 006493 115 VSMAKEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLD 194 (643)
Q Consensus 115 i~~i~~~~~~~~~~k~~~~~n~~~~~V~~r~g~~~~i~~~~LvvGDIV~l~~ge~iPaD~ill~~s~~~g~~~Vdes~Lt 194 (643)
+++++++++|++|++.|++.|+..++++.|+|.... ++++|+|||+|.+.+++.||||.++|.+++..|.|+|.+-.||
T Consensus 141 itl~keavdd~~r~~rd~~~Nse~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLD 219 (1051)
T KOG0210|consen 141 ITLIKEAVDDLKRRRRDRELNSEKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLD 219 (1051)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhhhheeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccC
Confidence 999999999999999999999999999978876655 9999999999999999999999999999999999999999999
Q ss_pred CccceeeecccccCCCCCchhhhcccceEEEeeCCCCCceEEEEEEEECCe--eeccCCCCeEEeceeeecCCeEEEEEE
Q 006493 195 GETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRE--LYAIDPSQILLRDSKLRNTAHVYGSVI 272 (643)
Q Consensus 195 GEs~p~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~--~~~l~~~ni~~rgs~l~~t~~~~gvVv 272 (643)
||++.+.|-|.+.++.+.+...+..++ +..|.|+++.+.|-|++.+..+ ..+|+.+|.+..++.+.+.+ ++|+|+
T Consensus 220 GETDWKLrl~vp~tQ~l~~~~el~~i~--v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t-~~gvVv 296 (1051)
T KOG0210|consen 220 GETDWKLRLPVPRTQHLTEDSELMEIS--VYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGT-AIGVVV 296 (1051)
T ss_pred CcccceeeccchhhccCCcccchheEE--EeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCc-EEEEEE
Confidence 999999999999998888887777666 8899999999999999999543 46899999999999998544 999999
Q ss_pred EeccccceecccCCCCCccChHHHHHHHHHHHHHHHHHHHHHHHHHHhhheeccCCCCccccCCCCCccccCCCCCchhH
Q 006493 273 FTGHDSKVMQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPG 352 (643)
Q Consensus 273 ~tG~~Tk~~~~~~~~~~k~s~l~~~~~~~~~~~~~~~l~~~~i~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 352 (643)
|||.||+.++|...++.|-.-++..+|.+.++++.++++++++....-.+ ...||
T Consensus 297 YTG~dtRsvMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~~g~------~~~wy------------------- 351 (1051)
T KOG0210|consen 297 YTGRDTRSVMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAMKGF------GSDWY------------------- 351 (1051)
T ss_pred EecccHHHHhccCCcccccceeeeecccHHHHHHHHHHHHHHHHHHhhcC------CCchH-------------------
Confidence 99999999999999999999999999999999998888888766544332 24688
Q ss_pred HHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccccccccCCCCceeccCcchhhcccccEEEEcCCCccccCceE
Q 006493 353 LAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMD 432 (643)
Q Consensus 353 ~~~~~~~i~ll~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTLT~n~m~ 432 (643)
..+++++.+++.+||++|-+.+++++++.+..+..|.++ .+..+|+++.-|+||+|+++.+|||||||+|+|.
T Consensus 352 -i~~~RfllLFS~IIPISLRvnlDmaK~~ys~~i~~D~~I------pgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~ 424 (1051)
T KOG0210|consen 352 -IYIIRFLLLFSSIIPISLRVNLDMAKIVYSWQIEHDKNI------PGTVVRSSTIPEELGRISYLLTDKTGTLTQNEME 424 (1051)
T ss_pred -HHHHHHHHHHhhhceeEEEEehhHHHhhHhhhcccCCCC------CceeeecCCChHHhcceEEEEecCcCccccchhe
Confidence 578899999999999999999999999999999988766 4789999999999999999999999999999999
Q ss_pred EEEEEEcCeecCCCCch-HHHHHHHHhhhhhhhhhhhhhccccCCCCccchhhhhcccCCCCccccccCCCCcCcchhcc
Q 006493 433 FLKCSVAGTAYGVSPSE-VELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMD 511 (643)
Q Consensus 433 v~~~~i~~~~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 511 (643)
+++++.+-..|..+.-+ .++....-...+ . ...+..
T Consensus 425 ~KKiHLGTv~~s~e~~~eV~~~i~s~~~~~--------------------------------~--~~~~~~--------- 461 (1051)
T KOG0210|consen 425 FKKIHLGTVAYSAETMDEVSQHIQSLYTPG--------------------------------R--NKGKGA--------- 461 (1051)
T ss_pred eeeeeeeeeeccHhHHHHHHHHHHHhhCCC--------------------------------c--cccccc---------
Confidence 99999999999765332 111111000000 0 000000
Q ss_pred cCCCCCCChhhHHHHHHHHhhcccccccccCCCCceeEecCChhHHHHHHHHHHcCcEEEEecCCeEEEEecCCCCCCcc
Q 006493 512 GNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPV 591 (643)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~lalch~~~~~~~~~~~~~~y~~gsp~E~All~~a~~~g~~~~~r~~~~~~~~~~~~~~g~~~ 591 (643)
....+.+.+..+++..+++|+||+++|..++ +|...||+.||||+|++++....|..+..|+...+.++.+.. .
T Consensus 462 ~~~~k~~~s~rv~~~V~alalCHNVTPv~e~-~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~-----~ 535 (1051)
T KOG0210|consen 462 LSRVKKDMSARVRNAVLALALCHNVTPVFED-DGEVSYQAASPDEVAIVKWTETVGLKLAKRDRHAITLRVPLD-----D 535 (1051)
T ss_pred chhhcCcccHHHHHHHHHHHHhccCCcccCC-CceEEeecCCCCeEEEEEeeeecceEEeecccceEEEecCCC-----c
Confidence 0111223445678899999999999998765 689999999999999999999999999999999999986532 3
Q ss_pred eeEEEEEEeecCCCCCceEEEEEEcC-CCeEEEEEeccchhhhhhh
Q 006493 592 EREFKILNLLDFTSKRKRMSVIVRDE-DGQILLLCKGADRLASPLL 636 (643)
Q Consensus 592 ~~~~~il~~~~F~S~rKrMSViv~~~-~g~~~l~~KGA~e~Il~~c 636 (643)
...|+||++|||+|+.|||++|||++ .+++..|.||||.+|....
T Consensus 536 ~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iV 581 (1051)
T KOG0210|consen 536 ELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIV 581 (1051)
T ss_pred ceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhccc
Confidence 68999999999999999999999997 7999999999999987654
No 5
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.7e-65 Score=594.79 Aligned_cols=428 Identities=29% Similarity=0.361 Sum_probs=338.3
Q ss_pred ccccCCCCCCCceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHHhhcc--CCCCCchhhhHHHHHHHHHHHHHHHHH
Q 006493 46 MHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTP--LSPFSPVSMLLPLAIVVGVSMAKEALE 123 (643)
Q Consensus 46 ~~~~~~~~yg~N~i~~~k~~~~~flp~~l~~~f~~~~~~~~l~~~il~~~~--~~~~~~~~~~~~l~~vl~i~~i~~~~~ 123 (643)
+..+|++.||.|+++..+...+. +.++.||.+++.++++++++++++. +.+.. .....++++++++++..+++
T Consensus 49 e~~~r~~~~G~N~~~~~~~~~~~---~~fl~~f~~~~~~iL~~~a~~s~~~~~~~~~~--~~~~~I~~~i~~n~~~g~~q 123 (917)
T COG0474 49 EVKRRLKKYGPNELPEEKKRSLL---KKFLRQFKDPFIILLLVAALLSAFVGDWVDAG--VDAIVILLVVVINALLGFVQ 123 (917)
T ss_pred HHHHHHhhcCCccccccccCcHH---HHHHHHHHHHHHHHHHHHHHHHHHhhcccccC--cceeeehHHHHHHHHHHHHH
Confidence 34668889999999977664432 7889999999999999999999874 21111 22233445667777888999
Q ss_pred HHHHhhhh---hhhcceEEEEEeCCCeEEEeeeeccccCcEEEeccCcccCccEEEEeecCCCCeEEEEccCCCCcccee
Q 006493 124 DWRRFMQD---KEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLK 200 (643)
Q Consensus 124 ~~~~~k~~---~~~n~~~~~V~~r~g~~~~i~~~~LvvGDIV~l~~ge~iPaD~ill~~s~~~g~~~Vdes~LtGEs~p~ 200 (643)
+++++++. +++.+.+++|+ |||++++|+|++|||||||+|+.||.||||++||++++ .+||||+|||||.|+
T Consensus 124 e~~a~~~l~~lk~~~~~~~~V~-R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~----l~VdEs~LTGES~pv 198 (917)
T COG0474 124 EYRAEKALEALKKMSSPKAKVL-RDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSD----LEVDESALTGESLPV 198 (917)
T ss_pred HHHHHHHHHHHHhhccCceEEE-eCCcEEEecHHHCCCCcEEEECCCCccccceEEEEecC----ceEEcccccCCCcch
Confidence 99997765 45556889999 89999999999999999999999999999999999885 599999999999999
Q ss_pred eecccccCCCCCchhhhcccceEEEeeCCCCCceEEEEEEEECCeeeccCCCCeEEeceeeecCCeEEEEEEEeccccce
Q 006493 201 VKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKV 280 (643)
Q Consensus 201 ~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~ni~~rgs~l~~t~~~~gvVv~tG~~Tk~ 280 (643)
.|.+..... .+.|.. ++..|++++||.+.++. +.|+|++||.+|++
T Consensus 199 ~K~~~~~~~----------------~~~~~~-----------------~d~~n~l~sGt~V~~G~-~~giVvaTG~~T~~ 244 (917)
T COG0474 199 EKQALPLTK----------------SDAPLG-----------------LDRDNMLFSGTTVVSGR-AKGIVVATGFETEF 244 (917)
T ss_pred hcccccccc----------------cccccc-----------------CCccceEEeCCEEEcce-EEEEEEEEcCccHH
Confidence 999865441 011110 23444555555554322 99999999999998
Q ss_pred ecccCC---CCCccChHHHHHHHHHHHHHHHHHHHHHHHHHHhhheeccCCCCccccCCCCCccccCCCCCchhHHHHHH
Q 006493 281 MQNATT---SPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLV 357 (643)
Q Consensus 281 ~~~~~~---~~~k~s~l~~~~~~~~~~~~~~~l~~~~i~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 357 (643)
+++... .....+++++.++++..+++.+.++++++.+++..+.... .|+ ..++
T Consensus 245 G~ia~~~~~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~----~~~--------------------~~~~ 300 (917)
T COG0474 245 GKIARLLPTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRGGN----GLL--------------------ESFL 300 (917)
T ss_pred HHHHHhhccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc----cHH--------------------HHHH
Confidence 887653 2246899999999999999999999998888876332111 133 5889
Q ss_pred HHHHHHhccccchhHHHHHHHHHHHHHHHhcccccccccCCCCceeccCcchhhcccccEEEEcCCCccccCceEEEEEE
Q 006493 358 TALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCS 437 (643)
Q Consensus 358 ~~i~ll~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTLT~n~m~v~~~~ 437 (643)
.++++++.++|++||+++++++.+++.+| ++++++||+++++|+||++++||||||||||+|+|+|++++
T Consensus 301 ~~v~l~va~IPegLp~~vti~la~g~~~m----------ak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~ 370 (917)
T COG0474 301 TALALAVAAVPEGLPAVVTIALALGAQRM----------AKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIY 370 (917)
T ss_pred HHHHHHHhccccchHHHHHHHHHHHHHHH----------HhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEE
Confidence 99999999999999999999999999999 88899999999999999999999999999999999999999
Q ss_pred EcCeecCCCCchHHHHHHHHhhhhhhhhhhhhhccccCCCCccchhhhhcccCCCCccccccCCCCcCcchhcccCCCCC
Q 006493 438 VAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKE 517 (643)
Q Consensus 438 i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 517 (643)
+++. +.+..+ ...
T Consensus 371 ~~~~--~~~~~~-----------------------------------------------------------------~~~ 383 (917)
T COG0474 371 INGG--GKDIDD-----------------------------------------------------------------KDL 383 (917)
T ss_pred eCCC--cccccc-----------------------------------------------------------------ccc
Confidence 8851 000000 000
Q ss_pred CChhhHHHHHHHHhhcccccccccCCCCceeEecCChhHHHHHHHHHHcCcEEEEecCCeEEEEecCCCCCCcceeEEEE
Q 006493 518 PNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKI 597 (643)
Q Consensus 518 ~~~~~~~~~~~~lalch~~~~~~~~~~~~~~y~~gsp~E~All~~a~~~g~~~~~r~~~~~~~~~~~~~~g~~~~~~~~i 597 (643)
........++.++++||++.+..+ + .++.|||+|.||+++|.+.|+.. .+. . .+..+++
T Consensus 384 ~~~~~~~~~l~~~~lc~~~~~~~~---~--~~~~gdptE~Al~~~a~~~~~~~-~~~--~-------------~~~~~~~ 442 (917)
T COG0474 384 KDSPALLRFLLAAALCNSVTPEKN---G--WYQAGDPTEGALVEFAEKLGFSL-DLS--G-------------LEVEYPI 442 (917)
T ss_pred ccchHHHHHHHHHHhcCccccccc---C--ceecCCccHHHHHHHHHhcCCcC-CHH--H-------------Hhhhcce
Confidence 112234478899999999977643 2 56689999999999999998843 100 0 2456789
Q ss_pred EEeecCCCCCceEEEEEEcCCCeEEEEEeccchhhhhhhhcc
Q 006493 598 LNLLDFTSKRKRMSVIVRDEDGQILLLCKGADRLASPLLFNF 639 (643)
Q Consensus 598 l~~~~F~S~rKrMSViv~~~~g~~~l~~KGA~e~Il~~c~~~ 639 (643)
++.+||||+|||||||++..+|++++|||||||+|+++|++.
T Consensus 443 ~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~ 484 (917)
T COG0474 443 LAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSI 484 (917)
T ss_pred eEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhccc
Confidence 999999999999999999777779999999999999999863
No 6
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.2e-65 Score=549.67 Aligned_cols=475 Identities=22% Similarity=0.247 Sum_probs=357.6
Q ss_pred CccccCCCCCCCceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchhhhHHHHHHHHHHHHHHHHHH
Q 006493 45 HMHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALED 124 (643)
Q Consensus 45 ~~~~~~~~~yg~N~i~~~k~~~~~flp~~l~~~f~~~~~~~~l~~~il~~~~~~~~~~~~~~~~l~~vl~i~~i~~~~~~ 124 (643)
++..+|++.||.|+++......++ +.+++||.+++..++|.++++|++. .++.-.+.+.+++++.++..+++|
T Consensus 27 ~ev~~r~~~yG~Nel~~ee~~~~w---k~vLeQF~n~Li~iLL~sA~ISfvl----~~~~e~~vI~liiv~nvtVG~~QE 99 (972)
T KOG0202|consen 27 DEVTRRRKKYGENELPAEEGESLW---KLVLEQFDNPLILILLLSAAISFVL----ADFDEPFVITLIIVINVTVGFVQE 99 (972)
T ss_pred HHHHHHHHhcCCccCccccCCcHH---HHHHHHHHhHHHHHHHHHHHHHHHH----Hhcccceeeeeeeeeeeeeeeeee
Confidence 345678999999999988776654 9999999999999999999999985 333334444566677888899999
Q ss_pred HHHhhhhhhhc---ceEEEEEeCCCeEEEeeeeccccCcEEEeccCcccCccEEEEeecCCCCeEEEEccCCCCccceee
Q 006493 125 WRRFMQDKEVN---ARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKV 201 (643)
Q Consensus 125 ~~~~k~~~~~n---~~~~~V~~r~g~~~~i~~~~LvvGDIV~l~~ge~iPaD~ill~~s~~~g~~~Vdes~LtGEs~p~~ 201 (643)
|+.+|+.++++ +..|+|+ |+|+.+.+.+++|||||||.|+.||.||||++|++..+ +.||||+|||||.|+.
T Consensus 100 y~aEkalEaLk~l~p~~~~V~-R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e~~s----l~iDeS~LTGEs~pv~ 174 (972)
T KOG0202|consen 100 YNAEKALEALKELVPPMAHVL-RSGKLQHILARELVPGDIVELKVGDKIPADLRLIEAKS----LRIDESSLTGESEPVS 174 (972)
T ss_pred hhhHHHHHHHHhcCCccceEE-ecCcccceehhccCCCCEEEEecCCccccceeEEeeee----eeeecccccCCccccc
Confidence 99999977665 4789999 89999999999999999999999999999999999887 8999999999999999
Q ss_pred ecccccCCCCCchhhhcccceEEEeeCCCCCceEEEEEEEECCeeeccCCCCeEEeceeeecCCeEEEEEEEecccccee
Q 006493 202 KRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVM 281 (643)
Q Consensus 202 K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~ni~~rgs~l~~t~~~~gvVv~tG~~Tk~~ 281 (643)
|........ + ..+..+..+..|+||.+..|+ +.|+|+.||.+|.++
T Consensus 175 K~t~~v~~~--~-----------~~~~~dk~NiaFsGT~V~~G~---------------------a~GIVi~TG~nTeiG 220 (972)
T KOG0202|consen 175 KDTDAVPKD--E-----------NADVQDKKNIAFSGTLVVAGR---------------------AKGIVIGTGLNTEIG 220 (972)
T ss_pred ccCccccCC--C-----------CCccccceeeEeecceeecCc---------------------eeEEEEeccccchHH
Confidence 976543310 0 112234456889999999998 999999999999876
Q ss_pred ccc---CCCCCccChHHHHHHHHHHHHHHHHHHHHHHHHHH-hhheeccCCCCccccCCCCCccccCCCCCchhHHHHHH
Q 006493 282 QNA---TTSPSKRSGIEKKMDKIIFILFAILVLISLISSIG-FAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLV 357 (643)
Q Consensus 282 ~~~---~~~~~k~s~l~~~~~~~~~~~~~~~l~~~~i~~i~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 357 (643)
+.. ...+..++|+|+.++.+...+..++.++++...++ ..++...-....|+ ...+..|.
T Consensus 221 ~I~~~m~~~e~~kTPLqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~~g~~f----------------k~~~~~f~ 284 (972)
T KOG0202|consen 221 KIFKMMQATESPKTPLQKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPVHGGSWF----------------KGALYYFK 284 (972)
T ss_pred HHHHHHhccCCCCCcHHHHHHHHHHHHHHHheehhhhHHHhhhhhhccccccccch----------------hchhhhhh
Confidence 543 33455689999999999999875555555544444 22222111112343 33456788
Q ss_pred HHHHHHhccccchhHHHHHHHHHHHHHHHhcccccccccCCCCceeccCcchhhcccccEEEEcCCCccccCceEEEEEE
Q 006493 358 TALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCS 437 (643)
Q Consensus 358 ~~i~ll~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTLT~n~m~v~~~~ 437 (643)
.++.+.+.+||++||+.++++.+++.++| ++++++||++.++|+||.+++||+|||||||+|+|.+.+++
T Consensus 285 IaVsLAVAAIPEGLPaVvT~tLALG~~rM----------akknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~ 354 (972)
T KOG0202|consen 285 IAVSLAVAAIPEGLPAVVTTTLALGTRRM----------AKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIF 354 (972)
T ss_pred HHHHHHHHhccCCCcchhhhhHHHhHHHH----------HhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEE
Confidence 89999999999999999999999999999 89999999999999999999999999999999999999999
Q ss_pred EcCeecCCCCchHHHHHHHHhhhhhhhhhhhhhccccCCCCccchhhhhcccCCCCccccccCCCCcCcchhcccCCCCC
Q 006493 438 VAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKE 517 (643)
Q Consensus 438 i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 517 (643)
+.+..+... .+ +.... ......+-.+.+..- .....
T Consensus 355 ~~~~~~~~~-~~-------------------------------f~~tg---------~ty~~~g~v~~~~~~---~~~~~ 390 (972)
T KOG0202|consen 355 IPDGGTATV-DE-------------------------------FNPTG---------TTYSPEGEVFKDGLY---EKDKA 390 (972)
T ss_pred ecccccccc-cc-------------------------------cccCC---------ceeCCCCceEecCcc---ccccc
Confidence 987654432 10 00000 000000101111100 00112
Q ss_pred CChhhHHHHHHHHhhcccccccccCCCCceeEe-cCChhHHHHHHHHHHcCcEEEEecCCeEEEEecCCCCCCcceeEEE
Q 006493 518 PNVDTLLLFFRILAICHTAIPELNEETGNLTYE-AESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFK 596 (643)
Q Consensus 518 ~~~~~~~~~~~~lalch~~~~~~~~~~~~~~y~-~gsp~E~All~~a~~~g~~~~~r~~~~~~~~~~~~~~g~~~~~~~~ 596 (643)
.+.+.+..+.++.++||.+....++. + .|. .|.|+|.||..+|.++|+.-..... ..-.+ ++.+..+..+.++
T Consensus 391 ~~~~~l~~l~~i~~lCNda~v~~~~~-~--~~~~~G~pTE~AL~vlaeKm~l~~~~~~~--~s~~~-~~~c~~~~~~~~~ 464 (972)
T KOG0202|consen 391 GDNDLLQELAEICALCNDATVEYNDA-D--CYEKVGEPTEGALIVLAEKMGLPGTRSTN--LSNEE-ASACNRVYSRLFK 464 (972)
T ss_pred cccHHHHHHHHHHHhhhhhhhhcCch-h--hHHhcCCchHHHHHHHHHHcCCCcchhhc--ccccc-cccchhHHHHhhh
Confidence 34456788999999999998876653 2 233 4999999999999999986533111 00011 2233333456778
Q ss_pred EEEeecCCCCCceEEEEEEcCCCe--EEEEEeccchhhhhhhhccCC
Q 006493 597 ILNLLDFTSKRKRMSVIVRDEDGQ--ILLLCKGADRLASPLLFNFLT 641 (643)
Q Consensus 597 il~~~~F~S~rKrMSViv~~~~g~--~~l~~KGA~e~Il~~c~~~~~ 641 (643)
..+++||+|+||+|||.+.++.++ +.+|+|||+|.|++||+.++.
T Consensus 465 ~~~elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~ 511 (972)
T KOG0202|consen 465 KIAELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYG 511 (972)
T ss_pred heeEeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEc
Confidence 889999999999999999987554 899999999999999987764
No 7
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.1e-65 Score=547.58 Aligned_cols=441 Identities=19% Similarity=0.212 Sum_probs=353.9
Q ss_pred CccccCCCCCCCceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHHhhcc--C---CCCCchhhhHHHHHHHHHHHHH
Q 006493 45 HMHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTP--L---SPFSPVSMLLPLAIVVGVSMAK 119 (643)
Q Consensus 45 ~~~~~~~~~yg~N~i~~~k~~~~~flp~~l~~~f~~~~~~~~l~~~il~~~~--~---~~~~~~~~~~~l~~vl~i~~i~ 119 (643)
++.++|++.||+|.++.++++.|. .++||.|++...+++++++++++.. + .+.+|++++.+++.|+++ .+.
T Consensus 123 ~el~~Rr~~fG~N~~p~k~~K~Fl---~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~~~GW~eG~aI~~sV~~V-V~V 198 (1034)
T KOG0204|consen 123 DELERRRKIFGSNTYPEKPPKGFL---RFVWEALQDVTLIILMVAAVVSLGLGIYTPGIEDGWIEGVAILLSVILV-VLV 198 (1034)
T ss_pred HHHHHHHHhcCCCCCCCCCCccHH---HHHHHHhccchHHHHHHHHHHHHhhhhccCCCCcccccchhheeeEEEE-EEE
Confidence 456778999999999999887654 8899999999999999999999875 2 245789888776554332 344
Q ss_pred HHHHHHHHhhhhhhhc----ceEEEEEeCCCeEEEeeeeccccCcEEEeccCcccCccEEEEeecCCCCeEEEEccCCCC
Q 006493 120 EALEDWRRFMQDKEVN----ARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDG 195 (643)
Q Consensus 120 ~~~~~~~~~k~~~~~n----~~~~~V~~r~g~~~~i~~~~LvvGDIV~l~~ge~iPaD~ill~~s~~~g~~~Vdes~LtG 195 (643)
.++.||++.++.+.++ +.++.|+ |+|+.++|+..||+||||+.|+.||.+||||+++++.+ +.||||+|||
T Consensus 199 tA~nDy~qe~QF~~L~~~k~~~k~~Vi-R~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~gn~----L~iDESSlTG 273 (1034)
T KOG0204|consen 199 TAVNDYRQELQFRKLQKEKRNIKFQVI-RGGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQGNS----LKIDESSLTG 273 (1034)
T ss_pred eecchhHHhhhhhhhhhhhhceEEEEE-ECCEEEEEEEeeeeeccEEEeecCCccccceEEEeccc----eeEecccccC
Confidence 6778888888877665 4679999 89999999999999999999999999999999999987 9999999999
Q ss_pred ccceeeecccccCCCCCchhhhcccceEEEeeCCCCCceEEEEEEEECCeeeccCCCCeEEeceeeecCCeEEEEEEEec
Q 006493 196 ETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTG 275 (643)
Q Consensus 196 Es~p~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~ni~~rgs~l~~t~~~~gvVv~tG 275 (643)
||++++|.+...+ ++++||.+++|. +.++|+.+|
T Consensus 274 ESd~v~k~~~~dP-------------------------fLlSGTkv~eGs---------------------gkMlVTaVG 307 (1034)
T KOG0204|consen 274 ESDHVQKSLDKDP-------------------------FLLSGTKVMEGS---------------------GKMLVTAVG 307 (1034)
T ss_pred CCcceeccCCCCC-------------------------eEeecceeecCc---------------------ceEEEEEee
Confidence 9999999875444 789999999999 999999999
Q ss_pred ccccee---cccCCCCCccChHHHHHHHHHHHHHHHHHHHHHHHHHHhhheec---cCCC-Cc-cccCCCCCccccCCCC
Q 006493 276 HDSKVM---QNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKIN---YQTP-QW-WYLKPKETDVYFNPGK 347 (643)
Q Consensus 276 ~~Tk~~---~~~~~~~~k~s~l~~~~~~~~~~~~~~~l~~~~i~~i~~~~~~~---~~~~-~~-~~l~~~~~~~~~~~~~ 347 (643)
.+|+.+ .........++|+|-++++++..+..+.+++|++.+++...... ...+ .. |- ....
T Consensus 308 mnt~wG~~m~~l~~~~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~----------~~~~ 377 (1034)
T KOG0204|consen 308 MNTQWGIIMTLLGAGGEEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGTGTT----------WSDE 377 (1034)
T ss_pred ecchHhhHHHhhhcCCCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCCCcc----------ccHH
Confidence 999654 44445555789999999999999999888888887766543211 1100 10 11 0111
Q ss_pred CchhHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccccccccCCCCceeccCcchhhcccccEEEEcCCCccc
Q 006493 348 PLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLT 427 (643)
Q Consensus 348 ~~~~~~~~~~~~i~ll~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTLT 427 (643)
.+..++..|..+++++++++|++||+++++..++..++|+ +.+.++|++++||+||..+.||+|||||||
T Consensus 378 ~~~~~v~~f~i~VTilVVAVPEGLPLAVTLsLAys~kkMm----------kD~~LVRhL~ACETMGsAT~ICsDKTGTLT 447 (1034)
T KOG0204|consen 378 YIQEFVKFFIIAVTILVVAVPEGLPLAVTLSLAYSMKKMM----------KDNNLVRHLDACETMGSATAICSDKTGTLT 447 (1034)
T ss_pred HHHHHHHHhhheeEEEEEECCCCccHHHHHHHHHHHHHHh----------cchhHHHHhHHHhhcCCceEEEecCcCceE
Confidence 1233445666778889999999999999999999999984 446789999999999999999999999999
Q ss_pred cCceEEEEEEEcCeecCCCCchHHHHHHHHhhhhhhhhhhhhhccccCCCCccchhhhhcccCCCCccccccCCCCcCcc
Q 006493 428 CNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDS 507 (643)
Q Consensus 428 ~n~m~v~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 507 (643)
.|.|++.+.|+++.+|.......
T Consensus 448 ~N~MtVV~~~~~~~~~k~~~~~~--------------------------------------------------------- 470 (1034)
T KOG0204|consen 448 TNRMTVVQSYIGSEHYKVNSPKS--------------------------------------------------------- 470 (1034)
T ss_pred eeeEEEEeeeeccccccccCccc---------------------------------------------------------
Confidence 99999999999998875322210
Q ss_pred hhcccCCCCCCChhhHHHHHHHHhhcccccccccCCCCceeEecCChhHHHHHHHHHHcCcEEEEecCCeEEEEecCCCC
Q 006493 508 RLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPK 587 (643)
Q Consensus 508 ~l~~~~~~~~~~~~~~~~~~~~lalch~~~~~~~~~~~~~~y~~gsp~E~All~~a~~~g~~~~~r~~~~~~~~~~~~~~ 587 (643)
..-.+.....++.+++.+.+.....++..|...-+.|||+|+|||.|+..+|.++..
T Consensus 471 --------~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~--------------- 527 (1034)
T KOG0204|consen 471 --------SNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQD--------------- 527 (1034)
T ss_pred --------ccCCHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCcchHh---------------
Confidence 001233456778888887776555544444344467999999999999999998755
Q ss_pred CCcceeEEEEEEeecCCCCCceEEEEEEcCCCeEEEEEeccchhhhhhhhccCCCC
Q 006493 588 GQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADRLASPLLFNFLTPS 643 (643)
Q Consensus 588 g~~~~~~~~il~~~~F~S~rKrMSViv~~~~g~~~l~~KGA~e~Il~~c~~~~~~~ 643 (643)
.+.+.++++++||+|+||||+|+++.+++..++|||||.|.|+.+|+++++.+
T Consensus 528 ---~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~~ 580 (1034)
T KOG0204|consen 528 ---VRPEEKVVKVYPFNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDSN 580 (1034)
T ss_pred ---hcchhheeEEeccCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECCC
Confidence 35678899999999999999999999877634999999999999999998753
No 8
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=100.00 E-value=4e-63 Score=583.85 Aligned_cols=481 Identities=19% Similarity=0.171 Sum_probs=339.7
Q ss_pred CccccCCCCCCCceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchhhhHHHHHHHHHHHHHHHHHH
Q 006493 45 HMHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALED 124 (643)
Q Consensus 45 ~~~~~~~~~yg~N~i~~~k~~~~~flp~~l~~~f~~~~~~~~l~~~il~~~~~~~~~~~~~~~~l~~vl~i~~i~~~~~~ 124 (643)
++.++|+++||+|+++.++...++ +.+++||++++.++++++++++++. .+|..++ .++++++++++..++++
T Consensus 30 ~ea~~rl~~~G~N~l~~~~~~s~~---~~~l~q~~~~~~~iL~~aails~~~---~~~~~~~-iIl~vv~in~~i~~~QE 102 (1053)
T TIGR01523 30 DEAQHRLKEVGENRLEADSGIDAK---AMLLHQVCNAMCMVLIIAAAISFAM---HDWIEGG-VISAIIALNILIGFIQE 102 (1053)
T ss_pred HHHHHHHHHcCCCCCCCCCCCCHH---HHHHHHHhCHHHHHHHHHHHHHHHH---hhHHHHH-HHHhHHHHHHHHHHHHH
Confidence 356778999999999998765443 8899999999999999999999874 4566555 45567778889999999
Q ss_pred HHHhhhhhhhc---ceEEEEEeCCCeEEEeeeeccccCcEEEeccCcccCccEEEEeecCCCCeEEEEccCCCCccceee
Q 006493 125 WRRFMQDKEVN---ARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKV 201 (643)
Q Consensus 125 ~~~~k~~~~~n---~~~~~V~~r~g~~~~i~~~~LvvGDIV~l~~ge~iPaD~ill~~s~~~g~~~Vdes~LtGEs~p~~ 201 (643)
++.+++.+.+. ..+++|+ |||++++|+++||||||||.|+.||.||||++|+++++ +.||||+|||||.|+.
T Consensus 103 ~~aekal~aL~~l~~~~~~Vi-Rdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rLi~~~~----L~VDES~LTGES~pV~ 177 (1053)
T TIGR01523 103 YKAEKTMDSLKNLASPMAHVI-RNGKSDAIDSHDLVPGDICLLKTGDTIPADLRLIETKN----FDTDEALLTGESLPVI 177 (1053)
T ss_pred HHHHHHHHHHhccCCCceEEE-eCCeeeecCHhhCCCCCEEEECCCCEeeccEEEEEeCc----eEEEchhhcCCCCcee
Confidence 99999876554 4689999 89999999999999999999999999999999999876 9999999999999999
Q ss_pred ecccccCCCCCchhhhcccceEEEeeCCCCCceEEEEEEEECCeeeccCCCCeEEeceeeecCCeEEEEEEEecccccee
Q 006493 202 KRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVM 281 (643)
Q Consensus 202 K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~ni~~rgs~l~~t~~~~gvVv~tG~~Tk~~ 281 (643)
|.+...... .+ +....+..++.|+||.+++|+ +.|+|++||.+|.++
T Consensus 178 K~~~~~~~~-~~-----------~~~~~d~~n~lf~GT~V~~G~---------------------g~~vVvatG~~T~~G 224 (1053)
T TIGR01523 178 KDAHATFGK-EE-----------DTPIGDRINLAFSSSAVTKGR---------------------AKGICIATALNSEIG 224 (1053)
T ss_pred ccccccccc-cc-----------cCCcccCCCccccCceEEeee---------------------EEEEEEEecCccHHH
Confidence 986432100 00 001113345678888888888 999999999999776
Q ss_pred cccCCC---C-----------------------------------CccChHHHHHHHHHHHHHHHHHHHHHHHHHHhhhe
Q 006493 282 QNATTS---P-----------------------------------SKRSGIEKKMDKIIFILFAILVLISLISSIGFAVK 323 (643)
Q Consensus 282 ~~~~~~---~-----------------------------------~k~s~l~~~~~~~~~~~~~~~l~~~~i~~i~~~~~ 323 (643)
+..... . ..++|+|+.+++++.+++++.++++++.++...+
T Consensus 225 kIa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~- 303 (1053)
T TIGR01523 225 AIAAGLQGDGGLFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKF- 303 (1053)
T ss_pred HHHHHHhhhhhccccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh-
Confidence 644311 0 0148999999999999888887777766654221
Q ss_pred eccCCCCccccCCCCCccccCCCCCchhHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccccccccCCCCcee
Q 006493 324 INYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQA 403 (643)
Q Consensus 324 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~v 403 (643)
. .| ...+..++.+++.++|++||++++++..+++++| ++++++|
T Consensus 304 ---~---~~--------------------~~~~~~av~l~Va~VPegLp~~vti~La~g~~rM----------ak~~~lV 347 (1053)
T TIGR01523 304 ---D---VD--------------------KEVAIYAICLAISIIPESLIAVLSITMAMGAANM----------SKRNVIV 347 (1053)
T ss_pred ---h---hh--------------------HHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHH----------HhcCCEe
Confidence 0 01 1345567889999999999999999999999999 8899999
Q ss_pred ccCcchhhcccccEEEEcCCCccccCceEEEEEEEcCe-ecCCCCchHHHHHHHHhhhhhhhhhhhhhccccCCCCccch
Q 006493 404 RTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAGT-AYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIE 482 (643)
Q Consensus 404 k~~~~~e~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~-~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (643)
|++.++|+||.+++||+|||||||+|+|+|+++++++. .|........ .....+.. .... ...+..
T Consensus 348 r~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~~~~~--~~~~~g~~-~~~~--------~~~~~~-- 414 (1053)
T TIGR01523 348 RKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNSDDA--FNPNEGNV-SGIP--------RFSPYE-- 414 (1053)
T ss_pred ccchhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEEecCCCCC--CCCccccc-cccc--------cccccc--
Confidence 99999999999999999999999999999999998752 2211100000 00000000 0000 000000
Q ss_pred hhhhcccCCCCccccccCCCCcCcchhccc-------CC-CCCCChhhHHHHHHHHhhcccccccccCCCCceeEecCCh
Q 006493 483 LETVITSNDGNDFKRRIKGFNFEDSRLMDG-------NW-LKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESP 554 (643)
Q Consensus 483 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~-------~~-~~~~~~~~~~~~~~~lalch~~~~~~~~~~~~~~y~~gsp 554 (643)
.++ .+..+..+... .. ......+....++.+.++||++....+++.+.+. ..|||
T Consensus 415 -----~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~~~~~-~~Gdp 477 (1053)
T TIGR01523 415 -----YSH-----------NEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDATDCWK-AHGDP 477 (1053)
T ss_pred -----ccc-----------cccccccccccccccccccccccccccHHHHHHHHHHHhccCCeeeccCCCCcee-eCcCc
Confidence 000 00000000000 00 0000123456788899999998764332223222 35899
Q ss_pred hHHHHHHHHHHcCcEEEEec---------C-CeEEEEecCCCCCCcceeEEEEEEeecCCCCCceEEEEEEcCCC-eEEE
Q 006493 555 DEAAFLVAAREFGFEFYRRT---------Q-SSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDG-QILL 623 (643)
Q Consensus 555 ~E~All~~a~~~g~~~~~r~---------~-~~~~~~~~~~~~g~~~~~~~~il~~~~F~S~rKrMSViv~~~~g-~~~l 623 (643)
+|.||+.+|.+.|+...... + +...++... -++....|++++++||||+|||||++++++++ ++++
T Consensus 478 tE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~~~ 554 (1053)
T TIGR01523 478 TEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHN---EKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETYNI 554 (1053)
T ss_pred cHHHHHHHHHHcCCCcccccchhhhhhhcccccccccccc---ccccccccceEEEeccCCCCCeEEEEEEeCCCCEEEE
Confidence 99999999999997531100 0 000010000 00013568999999999999999999997644 5899
Q ss_pred EEeccchhhhhhhhccC
Q 006493 624 LCKGADRLASPLLFNFL 640 (643)
Q Consensus 624 ~~KGA~e~Il~~c~~~~ 640 (643)
|+|||||+|+++|+++.
T Consensus 555 ~~KGApe~il~~c~~~~ 571 (1053)
T TIGR01523 555 YAKGAFERIIECCSSSN 571 (1053)
T ss_pred EEeCChHHHHHhhhHhh
Confidence 99999999999998754
No 9
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=100.00 E-value=1.7e-61 Score=571.55 Aligned_cols=436 Identities=19% Similarity=0.173 Sum_probs=337.4
Q ss_pred CccccCCCCCCCceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHHhhcc--CC--------CCCchhhhHHHHHHHH
Q 006493 45 HMHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTP--LS--------PFSPVSMLLPLAIVVG 114 (643)
Q Consensus 45 ~~~~~~~~~yg~N~i~~~k~~~~~flp~~l~~~f~~~~~~~~l~~~il~~~~--~~--------~~~~~~~~~~l~~vl~ 114 (643)
++.++|+++||+|+++.++.+.++ +.++++|+++++++++++++++++. +. ...|+.+ ++++++++
T Consensus 40 ~e~~~rl~~~G~N~l~~~~~~~~~---~~~l~~~~~~~~~iL~~aa~l~~~~~~~~~~~~~~~~~~~~~~~-~~i~~vv~ 115 (997)
T TIGR01106 40 ARAAEILARDGPNALTPPPTTPEW---VKFCRQLFGGFSMLLWIGAILCFLAYGIQASTEEEPQNDNLYLG-VVLSAVVI 115 (997)
T ss_pred HHHHHHHHHhCCCCCCCCCCCCHH---HHHHHHHhcchHHHHHHHHHHHHHHHHHhhccCCCcccccHHHH-HHHHHHHH
Confidence 356778999999999887766543 8899999999999999999987653 11 1234444 46777888
Q ss_pred HHHHHHHHHHHHHhhhhhhhcc---eEEEEEeCCCeEEEeeeeccccCcEEEeccCcccCccEEEEeecCCCCeEEEEcc
Q 006493 115 VSMAKEALEDWRRFMQDKEVNA---RKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETM 191 (643)
Q Consensus 115 i~~i~~~~~~~~~~k~~~~~n~---~~~~V~~r~g~~~~i~~~~LvvGDIV~l~~ge~iPaD~ill~~s~~~g~~~Vdes 191 (643)
++++.++++++++++..+.+++ .+++|+ |||++++|+++||+|||+|.|++||.|||||+|+++++ +.||||
T Consensus 116 i~~~i~~~qe~ka~~~l~~l~~~~~~~~~Vi-Rdg~~~~I~~~~lv~GDiv~l~~Gd~IPaD~~il~~~~----l~VdeS 190 (997)
T TIGR01106 116 ITGCFSYYQEAKSSKIMESFKNMVPQQALVI-RDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQG----CKVDNS 190 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCeeEEE-ECCEEEEeeHHHCCCCCEEEECCCCEEeeeEEEEEccC----cEEEcc
Confidence 9999999999999999877765 589999 89999999999999999999999999999999999765 899999
Q ss_pred CCCCccceeeecccccCCCCCchhhhcccceEEEeeCCCCCceEEEEEEEECCeeeccCCCCeEEeceeeecCCeEEEEE
Q 006493 192 NLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSV 271 (643)
Q Consensus 192 ~LtGEs~p~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~ni~~rgs~l~~t~~~~gvV 271 (643)
+|||||.|+.|.+++... ..-+..+..|+||.+++|. +.|+|
T Consensus 191 ~LTGES~pv~K~~~~~~~-----------------~~~~~~n~l~~Gt~v~~G~---------------------~~~~V 232 (997)
T TIGR01106 191 SLTGESEPQTRSPEFTHE-----------------NPLETRNIAFFSTNCVEGT---------------------ARGIV 232 (997)
T ss_pred ccCCCCCceeccCCCccc-----------------CccccCCeEEeccEeeeee---------------------EEEEE
Confidence 999999999998753210 0002233557777777666 99999
Q ss_pred EEeccccceecccC---CCCCccChHHHHHHHHHHHHHHHHHHHHHHHHHHhhheeccCCCCccccCCCCCccccCCCCC
Q 006493 272 IFTGHDSKVMQNAT---TSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKP 348 (643)
Q Consensus 272 v~tG~~Tk~~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~l~~~~i~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 348 (643)
++||.+|++++... ....+++|+++.++++...+..+.++++++.++++.+... .|
T Consensus 233 ~~tG~~T~~g~i~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~---------------- 291 (997)
T TIGR01106 233 VNTGDRTVMGRIASLASGLENGKTPIAIEIEHFIHIITGVAVFLGVSFFILSLILGY-----TW---------------- 291 (997)
T ss_pred EEccccchhhHHHhhhhhcccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----CH----------------
Confidence 99999998887655 4456679999999999999888887777766655433211 12
Q ss_pred chhHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccccccccCCCCceeccCcchhhcccccEEEEcCCCcccc
Q 006493 349 LVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTC 428 (643)
Q Consensus 349 ~~~~~~~~~~~i~ll~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTLT~ 428 (643)
...+..++.+++.++|++|+++++++...++.++ +++++++|+++++|+||++++||||||||||+
T Consensus 292 ----~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~m----------~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~ 357 (997)
T TIGR01106 292 ----LEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRM----------ARKNCLVKNLEAVETLGSTSTICSDKTGTLTQ 357 (997)
T ss_pred ----HHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHH----------HHCCcEecCcHHHHHhcCCCEEEECCCCceec
Confidence 1355667788888999999999999999999988 78899999999999999999999999999999
Q ss_pred CceEEEEEEEcCeecCCCCchHHHHHHHHhhhhhhhhhhhhhccccCCCCccchhhhhcccCCCCccccccCCCCcCcch
Q 006493 429 NQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSR 508 (643)
Q Consensus 429 n~m~v~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 508 (643)
|+|+|.++++++..|..+..+. ..+..+
T Consensus 358 n~m~v~~~~~~~~~~~~~~~~~------------------------------------------------~~~~~~---- 385 (997)
T TIGR01106 358 NRMTVAHMWFDNQIHEADTTED------------------------------------------------QSGVSF---- 385 (997)
T ss_pred CceEEEEEEECCeEEecCCccC------------------------------------------------CCCccC----
Confidence 9999999999887764321100 000000
Q ss_pred hcccCCCCCCChhhHHHHHHHHhhcccccccccCCCC--ceeEecCChhHHHHHHHHHHcCcEEEEecCCeEEEEecCCC
Q 006493 509 LMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETG--NLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPP 586 (643)
Q Consensus 509 l~~~~~~~~~~~~~~~~~~~~lalch~~~~~~~~~~~--~~~y~~gsp~E~All~~a~~~g~~~~~r~~~~~~~~~~~~~ 586 (643)
.......+.++.++++||++....+.+.- ...+..|||+|.||+++|...+.....
T Consensus 386 --------~~~~~~~~~ll~~~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~-------------- 443 (997)
T TIGR01106 386 --------DKSSATWLALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVME-------------- 443 (997)
T ss_pred --------CcccHHHHHHHHHHHHcCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCHHH--------------
Confidence 01112345788899999998764322110 012456999999999999865443211
Q ss_pred CCCcceeEEEEEEeecCCCCCceEEEEEEcC---CCeEEEEEeccchhhhhhhhccC
Q 006493 587 KGQPVEREFKILNLLDFTSKRKRMSVIVRDE---DGQILLLCKGADRLASPLLFNFL 640 (643)
Q Consensus 587 ~g~~~~~~~~il~~~~F~S~rKrMSViv~~~---~g~~~l~~KGA~e~Il~~c~~~~ 640 (643)
.+..|++++.+||||+||||++|+... ++++++|+|||||.|+++|++++
T Consensus 444 ----~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c~~~~ 496 (997)
T TIGR01106 444 ----MRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSSIL 496 (997)
T ss_pred ----HHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHHhhHHh
Confidence 245688899999999999999998743 35789999999999999998754
No 10
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=100.00 E-value=5.6e-60 Score=555.12 Aligned_cols=451 Identities=22% Similarity=0.201 Sum_probs=325.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcc-CCC------CCchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhc---ceEEEEEe
Q 006493 74 LFEQFNRVANIYFLIAALLSVTP-LSP------FSPVSMLLPLAIVVGVSMAKEALEDWRRFMQDKEVN---ARKVSVHV 143 (643)
Q Consensus 74 l~~~f~~~~~~~~l~~~il~~~~-~~~------~~~~~~~~~l~~vl~i~~i~~~~~~~~~~k~~~~~n---~~~~~V~~ 143 (643)
+++||++++++++++++++++++ +.+ .+|+..++++ ++++++++..++++++++++.+.+. +.+++|+
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il-~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~Vi- 78 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVIL-LILVANAIVGVWQERNAEKAIEALKEYESEHAKVL- 78 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEE-
Confidence 47899999999999999999975 221 3566665544 5666778889999999998876665 4689999
Q ss_pred CCCeEEEeeeeccccCcEEEeccCcccCccEEEEeecCCCCeEEEEccCCCCccceeeecccccCCCCCchhhhcccceE
Q 006493 144 GNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGT 223 (643)
Q Consensus 144 r~g~~~~i~~~~LvvGDIV~l~~ge~iPaD~ill~~s~~~g~~~Vdes~LtGEs~p~~K~~~~~~~~~~~~~~~~~~~~~ 223 (643)
|||++++|+++||||||||.|++||.|||||+|+++++ +.||||+|||||.|+.|.+...... +
T Consensus 79 Rdg~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~----l~VdeS~LTGES~pv~K~~~~~~~~----~-------- 142 (917)
T TIGR01116 79 RDGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKT----LRVDQSILTGESVSVNKHTESVPDE----R-------- 142 (917)
T ss_pred ECCEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecc----eEEEcccccCCCCcccccccccCcc----c--------
Confidence 89999999999999999999999999999999999765 8999999999999999987532200 0
Q ss_pred EEeeCCCCCceEEEEEEEECCeeeccCCCCeEEeceeeecCCeEEEEEEEeccccceec---ccCCCCCccChHHHHHHH
Q 006493 224 VKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQ---NATTSPSKRSGIEKKMDK 300 (643)
Q Consensus 224 i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~ni~~rgs~l~~t~~~~gvVv~tG~~Tk~~~---~~~~~~~k~s~l~~~~~~ 300 (643)
....+....+|+||.+.+|+ +.|+|++||.+|++++ +....+.+++++++.+++
T Consensus 143 --~~~~~~~n~l~~GT~v~~G~---------------------~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~ 199 (917)
T TIGR01116 143 --AVNQDKKNMLFSGTLVVAGK---------------------ARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDE 199 (917)
T ss_pred --cCcccccceeeeCCEEecce---------------------EEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHH
Confidence 00112223456666666655 9999999999998876 444566778999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhe-eccCCCCccccCCCCCccccCCCCCchhHHHHHHHHHHHHhccccchhHHHHHHHH
Q 006493 301 IIFILFAILVLISLISSIGFAVK-INYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVK 379 (643)
Q Consensus 301 ~~~~~~~~~l~~~~i~~i~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~l~~~~ 379 (643)
++..++.+.++++++.++++..+ ........|+ ...+..+..++.+++.++|++||++++++.
T Consensus 200 ~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~i~l~v~~iP~~Lp~~vti~l 263 (917)
T TIGR01116 200 FGELLSKVIGLICILVWVINIGHFNDPALGGGWI----------------QGAIYYFKIAVALAVAAIPEGLPAVITTCL 263 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccccchhH----------------HHHHHHHHHHHhhhhhccccccHHHHHHHH
Confidence 99998887777777666554321 1100011222 122335556788899999999999999999
Q ss_pred HHHHHHHhcccccccccCCCCceeccCcchhhcccccEEEEcCCCccccCceEEEEEEEcCeecCCCCchHHHHHHHHhh
Q 006493 380 FLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMA 459 (643)
Q Consensus 380 ~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~y~~~~~~~~~~~~~~~~ 459 (643)
++++++| +++++++|+++++|+||++++||||||||||+|+|+|.+++..+..+... ..
T Consensus 264 ~~~~~~m----------~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~-~~---------- 322 (917)
T TIGR01116 264 ALGTRKM----------AKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSL-NE---------- 322 (917)
T ss_pred HHHHHHH----------HHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCccccc-ce----------
Confidence 9999999 78899999999999999999999999999999999999998766432100 00
Q ss_pred hhhhhhhhhhhccccCCCCccchhhhhcccCCCCccccccCCCCcCcchhcccCCCCCCChhhHHHHHHHHhhccccccc
Q 006493 460 IDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPE 539 (643)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~lalch~~~~~ 539 (643)
....+ ..++..+..+.+.........+..+.++.++++||++...
T Consensus 323 ---------------------~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~ 367 (917)
T TIGR01116 323 ---------------------FCVTG--------------TTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLD 367 (917)
T ss_pred ---------------------EEecC--------------CccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeee
Confidence 00000 0000000000000000011223456788999999998765
Q ss_pred ccCCCCceeEecCChhHHHHHHHHHHcCcEEEEecCCeEEEEecCCCCCCcceeEEEEEEeecCCCCCceEEEEEEcCCC
Q 006493 540 LNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDG 619 (643)
Q Consensus 540 ~~~~~~~~~y~~gsp~E~All~~a~~~g~~~~~r~~~~~~~~~~~~~~g~~~~~~~~il~~~~F~S~rKrMSViv~~~~g 619 (643)
.+++.+.+. ..|||+|.||++++.++|+....+..+.+.....+.. ...+..|++++++||||+||||||+++.+ +
T Consensus 368 ~~~~~~~~~-~~gdp~E~ALl~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~pF~s~rK~msviv~~~-~ 443 (917)
T TIGR01116 368 FNERKGVYE-KVGEATEAALKVLVEKMGLPATKNGVSSKRRPALGCN--SVWNDKFKKLATLEFSRDRKSMSVLCKPS-T 443 (917)
T ss_pred ccccCCcee-eccChhHHHHHHHHHHcCCCchhcccccccccccchh--HHHHhhcceeeecccChhhCeEEEEEeeC-C
Confidence 433223221 2489999999999999998776544433332211100 00135688999999999999999999864 6
Q ss_pred eEEEEEeccchhhhhhhhccCC
Q 006493 620 QILLLCKGADRLASPLLFNFLT 641 (643)
Q Consensus 620 ~~~l~~KGA~e~Il~~c~~~~~ 641 (643)
++++|+|||||.|+++|++++.
T Consensus 444 ~~~~~~KGApe~il~~c~~~~~ 465 (917)
T TIGR01116 444 GNKLFVKGAPEGVLERCTHILN 465 (917)
T ss_pred cEEEEEcCChHHHHHhccceec
Confidence 7899999999999999987653
No 11
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=100.00 E-value=1.6e-59 Score=550.07 Aligned_cols=439 Identities=18% Similarity=0.159 Sum_probs=333.4
Q ss_pred CccccCCCCCCCceeecccccchhhhHHHHHHHH-HHHHHHHHHHHHHHhhccCCCCCchhhhHHHHHHHHHHHHHHHHH
Q 006493 45 HMHKKRPLKYCTNYISTTKYNFFSYFPKALFEQF-NRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALE 123 (643)
Q Consensus 45 ~~~~~~~~~yg~N~i~~~k~~~~~flp~~l~~~f-~~~~~~~~l~~~il~~~~~~~~~~~~~~~~l~~vl~i~~i~~~~~ 123 (643)
++.++|+++||+|+++.++.+.++ +.+++|| .++++++++++++++++. ..|..+++.+ +++++.++..+++
T Consensus 28 ~ev~~r~~~~G~N~i~~~~~~s~~---~~~l~~~~~~~~~~~L~~aa~ls~~~---g~~~~~~~i~-~~i~~~~~i~~~q 100 (884)
T TIGR01522 28 QEASHRRAFHGWNEFDVEEDESLW---KKFLSQFVKNPLILLLIASAVISVFM---GNIDDAVSIT-LAILIVVTVGFVQ 100 (884)
T ss_pred HHHHHHHHhcCCCcCCCCCCCCHH---HHHHHHHhhChHHHHHHHHHHHHHHH---cchhhHHHHH-hHHHHHHHHHHHH
Confidence 345778999999999988765443 8899999 899999999999999874 4566655443 4555667788999
Q ss_pred HHHHhhhhhhhc---ceEEEEEeCCCeEEEeeeeccccCcEEEeccCcccCccEEEEeecCCCCeEEEEccCCCCcccee
Q 006493 124 DWRRFMQDKEVN---ARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLK 200 (643)
Q Consensus 124 ~~~~~k~~~~~n---~~~~~V~~r~g~~~~i~~~~LvvGDIV~l~~ge~iPaD~ill~~s~~~g~~~Vdes~LtGEs~p~ 200 (643)
+++.+++.+++. +.+++|+ |||++++|+++||+|||||.|++||.|||||+|+++++ +.||||+|||||.|+
T Consensus 101 e~~a~~~l~~L~~l~~~~~~Vi-Rdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ii~g~~----l~VDES~LTGES~pv 175 (884)
T TIGR01522 101 EYRSEKSLEALNKLVPPECHLI-REGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAVD----LSIDESNLTGETTPV 175 (884)
T ss_pred HHHHHHHHHHHhccCCCeeEEE-ECCEEEEEEHHHCccCCEEEecCCCEEeeeEEEEEcCc----eEEEcccccCCCcce
Confidence 999998876665 4689999 89999999999999999999999999999999999765 899999999999999
Q ss_pred eecccccCCCCCchhhhcccceEEEeeCCCCCceEEEEEEEECCeeeccCCCCeEEeceeeecCCeEEEEEEEeccccce
Q 006493 201 VKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKV 280 (643)
Q Consensus 201 ~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~ni~~rgs~l~~t~~~~gvVv~tG~~Tk~ 280 (643)
.|.+++..... .....+..+..|+||.+.+|+ +.++|++||.+|.+
T Consensus 176 ~K~~~~~~~~~-------------~~~~~~~~n~v~~GT~v~~G~---------------------~~~~V~~tG~~T~~ 221 (884)
T TIGR01522 176 SKVTAPIPAAT-------------NGDLAERSNIAFMGTLVRCGH---------------------GKGIVVGTGSNTEF 221 (884)
T ss_pred ecccccccccc-------------cccccccCceEEeCCEEEeee---------------------EEEEEEEecCccHH
Confidence 99987532100 011223445778888888888 99999999999977
Q ss_pred eccc---CCCCCccChHHHHHHHHHHHHHHHHHHHHHHHHHHhhheeccCCCCccccCCCCCccccCCCCCchhHHHHHH
Q 006493 281 MQNA---TTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLV 357 (643)
Q Consensus 281 ~~~~---~~~~~k~s~l~~~~~~~~~~~~~~~l~~~~i~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 357 (643)
++.. ......++++++.++++..++.++.++++++.+++.++ .. ..| ...+.
T Consensus 222 gki~~~v~~~~~~kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~~~-~~----~~~--------------------~~~~~ 276 (884)
T TIGR01522 222 GAVFKMMQAIEKPKTPLQKSMDLLGKQLSLVSFGVIGVICLVGWF-QG----KDW--------------------LEMFT 276 (884)
T ss_pred HHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hc----CCH--------------------HHHHH
Confidence 6543 34455689999999999998876665555444443221 11 112 24667
Q ss_pred HHHHHHhccccchhHHHHHHHHHHHHHHHhcccccccccCCCCceeccCcchhhcccccEEEEcCCCccccCceEEEEEE
Q 006493 358 TALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCS 437 (643)
Q Consensus 358 ~~i~ll~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTLT~n~m~v~~~~ 437 (643)
.++.+++.+||++||++++++..++..++ +++++++|++.++|+||++++||||||||||+|+|+|.+++
T Consensus 277 ~~v~llv~aiP~~Lp~~vt~~l~~~~~r~----------ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~ 346 (884)
T TIGR01522 277 ISVSLAVAAIPEGLPIIVTVTLALGVLRM----------SKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIW 346 (884)
T ss_pred HHHHHHHHHccchHHHHHHHHHHHHHHHH----------hhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEEE
Confidence 78889999999999999999999999888 88999999999999999999999999999999999999998
Q ss_pred EcCeecCC-CCchHHHHHHHHhhhhhhhhhhhhhccccCCCCccchhhhhcccCCCCccccccCCCCcCcchhcccCCCC
Q 006493 438 VAGTAYGV-SPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLK 516 (643)
Q Consensus 438 i~~~~y~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 516 (643)
..+..+.. .....+ + ......++. ...
T Consensus 347 ~~~~~~~~~~~~~~~------------~----------------------------------~~~~~~~~~------~~~ 374 (884)
T TIGR01522 347 TSDGLHTMLNAVSLN------------Q----------------------------------FGEVIVDGD------VLH 374 (884)
T ss_pred ecCceEeeccCCccC------------C----------------------------------CCccccccc------ccc
Confidence 76543210 000000 0 000000000 000
Q ss_pred CCChhhHHHHHHHHhhcccccccccCCCCceeEecCChhHHHHHHHHHHcCcEEEEecCCeEEEEecCCCCCCcceeEEE
Q 006493 517 EPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFK 596 (643)
Q Consensus 517 ~~~~~~~~~~~~~lalch~~~~~~~~~~~~~~y~~gsp~E~All~~a~~~g~~~~~r~~~~~~~~~~~~~~g~~~~~~~~ 596 (643)
.........++.+.++||++.....+ +. ..|||+|.||++++...|+.. .+..++
T Consensus 375 ~~~~~~~~~~l~~~~l~~~~~~~~~~--~~---~~g~p~e~All~~~~~~~~~~--------------------~~~~~~ 429 (884)
T TIGR01522 375 GFYTVAVSRILEAGNLCNNAKFRNEA--DT---LLGNPTDVALIELLMKFGLDD--------------------LRETYI 429 (884)
T ss_pred cccCHHHHHHHHHHhhhCCCeecCCC--CC---cCCChHHHHHHHHHHHcCcHh--------------------HHhhCc
Confidence 11123456778888999998654221 22 138999999999999877631 134577
Q ss_pred EEEeecCCCCCceEEEEEEcC-CCeEEEEEeccchhhhhhhhccCC
Q 006493 597 ILNLLDFTSKRKRMSVIVRDE-DGQILLLCKGADRLASPLLFNFLT 641 (643)
Q Consensus 597 il~~~~F~S~rKrMSViv~~~-~g~~~l~~KGA~e~Il~~c~~~~~ 641 (643)
.++.+||+|+|||||++++.+ ++++++|+|||||.|+++|++++.
T Consensus 430 ~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~~~ 475 (884)
T TIGR01522 430 RVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQK 475 (884)
T ss_pred EEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhhhh
Confidence 899999999999999999874 578899999999999999987653
No 12
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=100.00 E-value=1.9e-59 Score=557.49 Aligned_cols=440 Identities=19% Similarity=0.188 Sum_probs=319.1
Q ss_pred ccccCCCCCCCceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchhhhHHHHHHHHHHHHHHHHHHH
Q 006493 46 MHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDW 125 (643)
Q Consensus 46 ~~~~~~~~yg~N~i~~~k~~~~~flp~~l~~~f~~~~~~~~l~~~il~~~~~~~~~~~~~~~~l~~vl~i~~i~~~~~~~ 125 (643)
+.++|+++||+|+++.++.+++ +.++++|.+|+++++++++++|++ .+++.+.+.++++++++.+...++++
T Consensus 144 e~~~r~~~yG~N~i~~~~~s~~----~ll~~~~~~p~~i~~i~~~~l~~~----~~~~~~~~~i~~i~~~~~~~~~~~~~ 215 (1054)
T TIGR01657 144 DIAQRKAKYGKNEIEIPVPSFL----ELLKEEVLHPFYVFQVFSVILWLL----DEYYYYSLCIVFMSSTSISLSVYQIR 215 (1054)
T ss_pred HHHHHHHhcCCCeeecCCCCHH----HHHHHHHhchHHHHHHHHHHHHHh----hhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456889999999999876655 899999999999999999888876 34444444455666677777888888
Q ss_pred HHhhhhhhhc--ceEEEEEeCCCeEEEeeeeccccCcEEEec--cCcccCccEEEEeecCCCCeEEEEccCCCCccceee
Q 006493 126 RRFMQDKEVN--ARKVSVHVGNGVFSYKPWEKIQVGDIVKVE--KDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKV 201 (643)
Q Consensus 126 ~~~k~~~~~n--~~~~~V~~r~g~~~~i~~~~LvvGDIV~l~--~ge~iPaD~ill~~s~~~g~~~Vdes~LtGEs~p~~ 201 (643)
+..++.+++. +..++|+ |||++++|+++||+|||||.|+ +|+.||||++|+++ .|.||||+|||||.|+.
T Consensus 216 k~~~~L~~~~~~~~~v~V~-Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~g-----~~~VdES~LTGES~Pv~ 289 (1054)
T TIGR01657 216 KQMQRLRDMVHKPQSVIVI-RNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSG-----SCIVNESMLTGESVPVL 289 (1054)
T ss_pred HHHHHHHHhhcCCeeEEEE-ECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEeC-----cEEEecccccCCcccee
Confidence 8877777765 4689999 8999999999999999999999 99999999999995 49999999999999999
Q ss_pred ecccccCCCCCchhhhcccceEEEeeCCCCCceEEEEEEEECCeeeccCCCCeEEeceeeecCCeEEEEEEEecccccee
Q 006493 202 KRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVM 281 (643)
Q Consensus 202 K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~ni~~rgs~l~~t~~~~gvVv~tG~~Tk~~ 281 (643)
|.+.+.... +.+ .+.....++.+.+|+||.+++.... ..++.+.|+|++||.+|..+
T Consensus 290 K~~~~~~~~--~~~-------~~~~~~~~~~~~lf~GT~v~~~~~~--------------~g~g~~~~vV~~TG~~T~~G 346 (1054)
T TIGR01657 290 KFPIPDNGD--DDE-------DLFLYETSKKHVLFGGTKILQIRPY--------------PGDTGCLAIVVRTGFSTSKG 346 (1054)
T ss_pred cccCCcccc--ccc-------cccccccccceEEEcCCEEEEEecC--------------CCCCcEEEEEEeCCccccch
Confidence 988643100 000 0111112344566777777742100 01245999999999999766
Q ss_pred cccC---CCCCccChHHHHHHHHHHHHHHHHHHHHHHHHHHhhheeccCCCCccccCCCCCccccCCCCCchhHHHHHHH
Q 006493 282 QNAT---TSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVT 358 (643)
Q Consensus 282 ~~~~---~~~~k~s~l~~~~~~~~~~~~~~~l~~~~i~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 358 (643)
+..+ ......+++++...+++..++++.++.+++.++.... .. ..| ...++.
T Consensus 347 ~i~~~i~~~~~~~~~~~~~~~~~~~~l~~~a~i~~i~~~~~~~~-~~----~~~--------------------~~~~l~ 401 (1054)
T TIGR01657 347 QLVRSILYPKPRVFKFYKDSFKFILFLAVLALIGFIYTIIELIK-DG----RPL--------------------GKIILR 401 (1054)
T ss_pred HHHHHhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cC----CcH--------------------HHHHHH
Confidence 6543 3445568888888877766654444333322221111 11 122 257888
Q ss_pred HHHHHhccccchhHHHHHHHHHHHHHHHhcccccccccCCCCceeccCcchhhcccccEEEEcCCCccccCceEEEEEEE
Q 006493 359 ALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSV 438 (643)
Q Consensus 359 ~i~ll~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTLT~n~m~v~~~~i 438 (643)
++.+++.++|++||++++++..++..++ ++++++|+++.++|.||+++++|||||||||+|+|+|.+++.
T Consensus 402 ~l~iiv~~vP~~LP~~~ti~l~~~~~rL----------~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~ 471 (1054)
T TIGR01657 402 SLDIITIVVPPALPAELSIGINNSLARL----------KKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQG 471 (1054)
T ss_pred HHHHHHhhcCchHHHHHHHHHHHHHHHH----------HHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEec
Confidence 9999999999999999999999999998 788999999999999999999999999999999999999875
Q ss_pred cCeecCCCCchHHHHHHHHhhhhhhhhhhhhhccccCCCCccchhhhhcccCCCCccccccCCCCcCcchhcccCCCCCC
Q 006493 439 AGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEP 518 (643)
Q Consensus 439 ~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 518 (643)
.+...... .. ..+ .
T Consensus 472 ~~~~~~~~-~~-----------------------------------------------------------~~~------~ 485 (1054)
T TIGR01657 472 LSGNQEFL-KI-----------------------------------------------------------VTE------D 485 (1054)
T ss_pred ccCccccc-cc-----------------------------------------------------------ccc------c
Confidence 43210000 00 000 0
Q ss_pred ChhhHHHHHHHHhhcccccccccCCCCceeEecCChhHHHHHHHHHHcCcEEEE-ecCC---eE--EEEecCCCCCCcce
Q 006493 519 NVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYR-RTQS---SV--FIRERYPPKGQPVE 592 (643)
Q Consensus 519 ~~~~~~~~~~~lalch~~~~~~~~~~~~~~y~~gsp~E~All~~a~~~g~~~~~-r~~~---~~--~~~~~~~~~g~~~~ 592 (643)
.......+..++++||++.... |. ..|||+|.||++++ |+.+.. .... .. .+... + ..
T Consensus 486 ~~~~~~~~~~~~a~C~~~~~~~----~~---~~Gdp~E~al~~~~---~~~~~~~~~~~~~~~~~~~i~~~----~--~~ 549 (1054)
T TIGR01657 486 SSLKPSITHKALATCHSLTKLE----GK---LVGDPLDKKMFEAT---GWTLEEDDESAEPTSILAVVRTD----D--PP 549 (1054)
T ss_pred cccCchHHHHHHHhCCeeEEEC----CE---EecCHHHHHHHHhC---CCEEECCCCcccccccccceecc----C--CC
Confidence 0012235677899999986532 22 35999999999984 666533 1100 00 00000 0 13
Q ss_pred eEEEEEEeecCCCCCceEEEEEEcCC-CeEEEEEeccchhhhhhhhcc
Q 006493 593 REFKILNLLDFTSKRKRMSVIVRDED-GQILLLCKGADRLASPLLFNF 639 (643)
Q Consensus 593 ~~~~il~~~~F~S~rKrMSViv~~~~-g~~~l~~KGA~e~Il~~c~~~ 639 (643)
..+++++++||+|+|||||||++.++ +++++|+|||||.|+++|++.
T Consensus 550 ~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~ 597 (1054)
T TIGR01657 550 QELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPE 597 (1054)
T ss_pred ceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCc
Confidence 57999999999999999999999764 678899999999999999854
No 13
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=100.00 E-value=5e-60 Score=557.57 Aligned_cols=432 Identities=19% Similarity=0.197 Sum_probs=322.5
Q ss_pred CccccCCCCCCCceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHHhhccC--CC--------CCchhhhHHHHHHHH
Q 006493 45 HMHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPL--SP--------FSPVSMLLPLAIVVG 114 (643)
Q Consensus 45 ~~~~~~~~~yg~N~i~~~k~~~~~flp~~l~~~f~~~~~~~~l~~~il~~~~~--~~--------~~~~~~~~~l~~vl~ 114 (643)
++.++|+++||+|+++.++.+.++ +.+++||+++++++|+++++++++.. .+ .+|+.+++.++ +++
T Consensus 64 ~ev~~r~~~yG~N~l~~~~~~s~~---~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~il~-~v~ 139 (941)
T TIGR01517 64 STLERREKVYGKNELPEKPPKSFL---QIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILV-SVI 139 (941)
T ss_pred HHHHHHHHHhCCCCCCCCCCCCHH---HHHHHHHhCHHHHHHHHHHHHHHHHhhcccccccCccccchHHHHHHHH-HHH
Confidence 456778999999999999876543 88999999999999999999998741 11 25666554443 334
Q ss_pred HHHHHHHHHHHHHhhhhhhh----cceEEEEEeCCCeEEEeeeeccccCcEEEeccCcccCccEEEEeecCCCCeEEEEc
Q 006493 115 VSMAKEALEDWRRFMQDKEV----NARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVET 190 (643)
Q Consensus 115 i~~i~~~~~~~~~~k~~~~~----n~~~~~V~~r~g~~~~i~~~~LvvGDIV~l~~ge~iPaD~ill~~s~~~g~~~Vde 190 (643)
+..+..++++++.+++.+++ ++.+++|+ |||++++|++++|+|||||.|++||.|||||+|+++++ +.|||
T Consensus 140 ~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~Vi-RdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g~~----l~VdE 214 (941)
T TIGR01517 140 LVVLVTAVNDYKKELQFRQLNREKSAQKIAVI-RGGQEQQISIHDIVVGDIVSLSTGDVVPADGVFISGLS----LEIDE 214 (941)
T ss_pred HHhHHHHHHHHHHHHHHHHHHhccCCCceEEE-ECCEEEEEeHHHCCCCCEEEECCCCEecccEEEEEcCc----EEEEe
Confidence 44455666666666654444 35689999 89999999999999999999999999999999999644 99999
Q ss_pred cCCCCccceeeecccccCCCCCchhhhcccceEEEeeCCCCCceEEEEEEEECCeeeccCCCCeEEeceeeecCCeEEEE
Q 006493 191 MNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGS 270 (643)
Q Consensus 191 s~LtGEs~p~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~ni~~rgs~l~~t~~~~gv 270 (643)
|+|||||.|+.|.+++.. .+|+||.+.+|+ +.++
T Consensus 215 S~LTGES~pv~K~~~~~n-------------------------~v~~GT~v~~G~---------------------~~~i 248 (941)
T TIGR01517 215 SSITGESDPIKKGAPKDS-------------------------FLLSGTVVNEGS---------------------GRML 248 (941)
T ss_pred cccCCCCCcccccCCCCc-------------------------eEEeCCeEEeeE---------------------EEEE
Confidence 999999999999875431 569999999888 9999
Q ss_pred EEEeccccceecc---cCCCCCccChHHHHHHHHHHHHHHHHHHHHHHHHHHhhh---eeccCCCCccccCCCCCccccC
Q 006493 271 VIFTGHDSKVMQN---ATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAV---KINYQTPQWWYLKPKETDVYFN 344 (643)
Q Consensus 271 Vv~tG~~Tk~~~~---~~~~~~k~s~l~~~~~~~~~~~~~~~l~~~~i~~i~~~~---~~~~~~~~~~~l~~~~~~~~~~ 344 (643)
|++||.+|.+++. ....+ +++++++.++++..++..+.++++++.++++.+ +.....+ .+ .
T Consensus 249 V~~tG~~T~~gki~~~~~~~~-~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~--~~----------~ 315 (941)
T TIGR01517 249 VTAVGVNSFGGKLMMELRAEG-EDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGD--GR----------D 315 (941)
T ss_pred EEEeCCCcHHHHHHHhhccCC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc--cc----------c
Confidence 9999999966553 33333 467999999999999888777777766655432 1100000 00 0
Q ss_pred CCCCchhHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccccccccCCCCceeccCcchhhcccccEEEEcCCC
Q 006493 345 PGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTG 424 (643)
Q Consensus 345 ~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTG 424 (643)
+..........+..++.+++.+||++|+++++++....+.++ +++++++|+++++|+||++++|||||||
T Consensus 316 ~~~~~~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~m----------ak~~ilvk~l~a~E~lg~v~~Ic~DKTG 385 (941)
T TIGR01517 316 TEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKM----------MKDNNLVRHLAACETMGSATAICSDKTG 385 (941)
T ss_pred cchhhHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHH----------HhCCCEEechHHhhhccCceEEEEcCcC
Confidence 000011234577888999999999999999999999988888 7899999999999999999999999999
Q ss_pred ccccCceEEEEEEEcCeecCCCCchHHHHHHHHhhhhhhhhhhhhhccccCCCCccchhhhhcccCCCCccccccCCCCc
Q 006493 425 TLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNF 504 (643)
Q Consensus 425 TLT~n~m~v~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 504 (643)
|||+|+|+|++++.++..+..+..
T Consensus 386 TLT~n~m~v~~~~~~~~~~~~~~~-------------------------------------------------------- 409 (941)
T TIGR01517 386 TLTQNVMSVVQGYIGEQRFNVRDV-------------------------------------------------------- 409 (941)
T ss_pred ceeeceEEEEEEEEecceEecCcc--------------------------------------------------------
Confidence 999999999999876544322100
Q ss_pred CcchhcccCCCCCCChhhHHHHHHHHhhcccccccccCCCCceeEecCChhHHHHHHHHHHcCcEEEEecCCeEEEEecC
Q 006493 505 EDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERY 584 (643)
Q Consensus 505 ~d~~l~~~~~~~~~~~~~~~~~~~~lalch~~~~~~~~~~~~~~y~~gsp~E~All~~a~~~g~~~~~r~~~~~~~~~~~ 584 (643)
.. ... .....++...+.||+..+...++.+ ..+..|||+|.||++++...|.+...
T Consensus 410 -----~~-----~~~-~~~~~~l~~~~~~~s~~~~~~~~~~-~~~~~g~p~e~All~~~~~~~~~~~~------------ 465 (941)
T TIGR01517 410 -----LR-----NVP-KHVRNILVEGISLNSSSEEVVDRGG-KRAFIGSKTECALLGFLLLLGRDYQE------------ 465 (941)
T ss_pred -----cc-----cCC-HHHHHHHHHHHHhCCCCccccCCCC-ccccCCCccHHHHHHHHHHcCCCHHH------------
Confidence 00 000 1223334444444444332211112 12456999999999999887754311
Q ss_pred CCCCCcceeEEEEEEeecCCCCCceEEEEEEcCCCeEEEEEeccchhhhhhhhccC
Q 006493 585 PPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADRLASPLLFNFL 640 (643)
Q Consensus 585 ~~~g~~~~~~~~il~~~~F~S~rKrMSViv~~~~g~~~l~~KGA~e~Il~~c~~~~ 640 (643)
.+..+++++.+||+|+||||||+++.+++++++|+|||||.|+++|++++
T Consensus 466 ------~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~ 515 (941)
T TIGR01517 466 ------VRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRL 515 (941)
T ss_pred ------HHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHh
Confidence 12457788999999999999999998778899999999999999998753
No 14
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=100.00 E-value=1.2e-56 Score=522.70 Aligned_cols=404 Identities=18% Similarity=0.185 Sum_probs=317.0
Q ss_pred CccccCCCCCCCceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchhhhHHHHHHHHHHHHHHHHHH
Q 006493 45 HMHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALED 124 (643)
Q Consensus 45 ~~~~~~~~~yg~N~i~~~k~~~~~flp~~l~~~f~~~~~~~~l~~~il~~~~~~~~~~~~~~~~l~~vl~i~~i~~~~~~ 124 (643)
++.++|+++||+|+++.++.+.++ +.+++||+++++++++++++++++. .+|...+ .++++++++.+.+++++
T Consensus 71 ~ea~~r~~~~G~N~l~~~~~~s~~---~~~~~~~~~p~~~lL~~aa~ls~~~---~~~~~a~-~I~~iv~i~~~i~~~qe 143 (902)
T PRK10517 71 AEVESAREQHGENELPAQKPLPWW---VHLWVCYRNPFNILLTILGAISYAT---EDLFAAG-VIALMVAISTLLNFIQE 143 (902)
T ss_pred HHHHHHHHhcCCCCCCCCCCCCHH---HHHHHHHHhHHHHHHHHHHHHHHHH---ccHHHHH-HHHHHHHHHHHHHHHHH
Confidence 456778999999999999877553 8899999999999999999999874 4455444 45567778888899999
Q ss_pred HHHhhhhhhh---cceEEEEEeCC------CeEEEeeeeccccCcEEEeccCcccCccEEEEeecCCCCeEEEEccCCCC
Q 006493 125 WRRFMQDKEV---NARKVSVHVGN------GVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDG 195 (643)
Q Consensus 125 ~~~~k~~~~~---n~~~~~V~~r~------g~~~~i~~~~LvvGDIV~l~~ge~iPaD~ill~~s~~~g~~~Vdes~LtG 195 (643)
++..++.+.+ .+.+++|+ || |++++|++++|+|||||.|++||.|||||+|+++++ +.||||+|||
T Consensus 144 ~ra~~~~~~L~~l~~~~a~Vi-R~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaDg~li~g~~----l~VDES~LTG 218 (902)
T PRK10517 144 ARSTKAADALKAMVSNTATVL-RVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADLRILQARD----LFVAQASLTG 218 (902)
T ss_pred HHHHHHHHHHHhhCCCeEEEE-ECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeeeEEEEEcCc----eEEEecCcCC
Confidence 9999876554 45789999 78 789999999999999999999999999999999765 7999999999
Q ss_pred ccceeeecccccCCCCCchhhhcccceEEEeeCCCCCceEEEEEEEECCeeeccCCCCeEEeceeeecCCeEEEEEEEec
Q 006493 196 ETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTG 275 (643)
Q Consensus 196 Es~p~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~ni~~rgs~l~~t~~~~gvVv~tG 275 (643)
||.|+.|.+++..... ....+..+.+|+||.+++|+ +.++|++||
T Consensus 219 ES~PV~K~~~~~~~~~--------------~~~~~~~n~vfaGT~V~~G~---------------------~~~vV~atG 263 (902)
T PRK10517 219 ESLPVEKFATTRQPEH--------------SNPLECDTLCFMGTNVVSGT---------------------AQAVVIATG 263 (902)
T ss_pred CCCceecccccccccc--------------cCccccccceeeCceEeeee---------------------EEEEEEEec
Confidence 9999999987532100 00112334678888888887 999999999
Q ss_pred cccceeccc---CCCCCccChHHHHHHHHHHHHHHHHHHHHHHHHHHhhheeccCCCCccccCCCCCccccCCCCCchhH
Q 006493 276 HDSKVMQNA---TTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPG 352 (643)
Q Consensus 276 ~~Tk~~~~~---~~~~~k~s~l~~~~~~~~~~~~~~~l~~~~i~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 352 (643)
.+|.+++.. .....+++++++.++++..++..+.++++++.++++.+... .|
T Consensus 264 ~~T~~GkI~~~v~~~~~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~~~~-----~~-------------------- 318 (902)
T PRK10517 264 ANTWFGQLAGRVSEQDSEPNAFQQGISRVSWLLIRFMLVMAPVVLLINGYTKG-----DW-------------------- 318 (902)
T ss_pred cccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhcC-----CH--------------------
Confidence 999776644 34556689999999999998887777777766555432211 12
Q ss_pred HHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccccccccCCCCceeccCcchhhcccccEEEEcCCCccccCceE
Q 006493 353 LAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMD 432 (643)
Q Consensus 353 ~~~~~~~i~ll~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTLT~n~m~ 432 (643)
...+..++.+++.++|++||++++++...++.+| +++++++|+++++|+||++++||||||||||+|+|+
T Consensus 319 ~~~l~~alsv~V~~~Pe~LP~~vt~~la~g~~~m----------ak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~ 388 (902)
T PRK10517 319 WEAALFALSVAVGLTPEMLPMIVTSTLARGAVKL----------SKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIV 388 (902)
T ss_pred HHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHH----------HhCCcEEecchhhhhccCCCEEEecCCCccccceEE
Confidence 2467788999999999999999999998888888 889999999999999999999999999999999999
Q ss_pred EEEEEEcCeecCCCCchHHHHHHHHhhhhhhhhhhhhhccccCCCCccchhhhhcccCCCCccccccCCCCcCcchhccc
Q 006493 433 FLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDG 512 (643)
Q Consensus 433 v~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 512 (643)
+.++.. ..+. +
T Consensus 389 V~~~~~---~~~~--~---------------------------------------------------------------- 399 (902)
T PRK10517 389 LENHTD---ISGK--T---------------------------------------------------------------- 399 (902)
T ss_pred EEEEec---CCCC--C----------------------------------------------------------------
Confidence 987530 0000 0
Q ss_pred CCCCCCChhhHHHHHHHHhhcccccccccCCCCceeEecCChhHHHHHHHHHHcCcEEEEecCCeEEEEecCCCCCCcce
Q 006493 513 NWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVE 592 (643)
Q Consensus 513 ~~~~~~~~~~~~~~~~~lalch~~~~~~~~~~~~~~y~~gsp~E~All~~a~~~g~~~~~r~~~~~~~~~~~~~~g~~~~ 592 (643)
.++++...++|... . . + .++|.|.|++.++...+... ..
T Consensus 400 ----------~~~ll~~a~l~~~~--~--~--~-----~~~p~d~All~~a~~~~~~~--------------------~~ 438 (902)
T PRK10517 400 ----------SERVLHSAWLNSHY--Q--T--G-----LKNLLDTAVLEGVDEESARS--------------------LA 438 (902)
T ss_pred ----------HHHHHHHHHhcCCc--C--C--C-----CCCHHHHHHHHHHHhcchhh--------------------hh
Confidence 01233334443321 1 1 1 37999999999986532100 13
Q ss_pred eEEEEEEeecCCCCCceEEEEEEcCCCeEEEEEeccchhhhhhhhccC
Q 006493 593 REFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADRLASPLLFNFL 640 (643)
Q Consensus 593 ~~~~il~~~~F~S~rKrMSViv~~~~g~~~l~~KGA~e~Il~~c~~~~ 640 (643)
..|+.++.+||||+|||||++++.+++.+++++|||||.|+++|+++.
T Consensus 439 ~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~ 486 (902)
T PRK10517 439 SRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVR 486 (902)
T ss_pred hcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhh
Confidence 457788999999999999999987777889999999999999998754
No 15
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=100.00 E-value=4.1e-56 Score=512.18 Aligned_cols=385 Identities=21% Similarity=0.235 Sum_probs=314.5
Q ss_pred ccccCCCCCCCceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchhhhHHHHHHHHHHHHHHHHHHH
Q 006493 46 MHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDW 125 (643)
Q Consensus 46 ~~~~~~~~yg~N~i~~~k~~~~~flp~~l~~~f~~~~~~~~l~~~il~~~~~~~~~~~~~~~~l~~vl~i~~i~~~~~~~ 125 (643)
+.++|+++||+|+++.++.+.| +.++++|++++++.++++++++++. ..|.++++ ++++++++.+.++++++
T Consensus 6 ea~~r~~~~G~N~~~~~~~~~~----~~~~~~~~~~~~~lL~~aa~~s~~~---~~~~~~~~-i~~~~~i~~~i~~~qe~ 77 (755)
T TIGR01647 6 EAKKRLAKYGPNELPEKKVSPL----LKFLGFFWNPLSWVMEAAAIIAIAL---ENWVDFVI-ILGLLLLNATIGFIEEN 77 (755)
T ss_pred HHHHHHHhcCCCCCCCCCCCHH----HHHHHHHhchHHHHHHHHHHHHHhh---cchhhhhh-hhhhhHHHHHHHHHHHH
Confidence 3567899999999998666544 7889999999999999999999874 45666554 44666778888999999
Q ss_pred HHhhhhhhh---cceEEEEEeCCCeEEEeeeeccccCcEEEeccCcccCccEEEEeecCCCCeEEEEccCCCCccceeee
Q 006493 126 RRFMQDKEV---NARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVK 202 (643)
Q Consensus 126 ~~~k~~~~~---n~~~~~V~~r~g~~~~i~~~~LvvGDIV~l~~ge~iPaD~ill~~s~~~g~~~Vdes~LtGEs~p~~K 202 (643)
+.+++.+.+ .+.+++|+ |||++++|+++||+|||||.|++||.|||||+|+++++ +.||||+|||||.|+.|
T Consensus 78 ~a~~~~~~L~~~~~~~~~V~-Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~----~~VDeS~LTGES~PV~K 152 (755)
T TIGR01647 78 KAGNAVEALKQSLAPKARVL-RDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDY----IQVDQAALTGESLPVTK 152 (755)
T ss_pred HHHHHHHHHHhhCCCeEEEE-ECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCc----eEEEcccccCCccceEe
Confidence 998876555 45789999 89999999999999999999999999999999999665 89999999999999999
Q ss_pred cccccCCCCCchhhhcccceEEEeeCCCCCceEEEEEEEECCeeeccCCCCeEEeceeeecCCeEEEEEEEeccccceec
Q 006493 203 RAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQ 282 (643)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~ni~~rgs~l~~t~~~~gvVv~tG~~Tk~~~ 282 (643)
.+++.. |+||.+.+|+ +.++|++||.+|.+++
T Consensus 153 ~~~~~v---------------------------~aGT~v~~G~---------------------~~~~V~~tG~~T~~g~ 184 (755)
T TIGR01647 153 KTGDIA---------------------------YSGSTVKQGE---------------------AEAVVTATGMNTFFGK 184 (755)
T ss_pred ccCCee---------------------------eccCEEEccE---------------------EEEEEEEcCCccHHHH
Confidence 876544 9999999999 9999999999997665
Q ss_pred c---cCCCCCccChHHHHHHHHHHHHHHHHHHHHHHHHHHhhheeccCCCCccccCCCCCccccCCCCCchhHHHHHHHH
Q 006493 283 N---ATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTA 359 (643)
Q Consensus 283 ~---~~~~~~k~s~l~~~~~~~~~~~~~~~l~~~~i~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (643)
. .......++++++.++++..++.++.++++++.++++++.... +| ...+..+
T Consensus 185 i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~----~~--------------------~~~~~~~ 240 (755)
T TIGR01647 185 AAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGRGE----SF--------------------REGLQFA 240 (755)
T ss_pred HHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC----CH--------------------HHHHHHH
Confidence 3 4455556789999999999999888888777776655431111 12 2467778
Q ss_pred HHHHhccccchhHHHHHHHHHHHHHHHhcccccccccCCCCceeccCcchhhcccccEEEEcCCCccccCceEEEEEEEc
Q 006493 360 LILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVA 439 (643)
Q Consensus 360 i~ll~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~ 439 (643)
+.+++.+||++||++++++...++.++ +++++++|+++++|+||.+++||||||||||+|+|+|.+++..
T Consensus 241 i~vlv~a~P~~Lp~~~~~~la~g~~r~----------ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~~ 310 (755)
T TIGR01647 241 LVLLVGGIPIAMPAVLSVTMAVGAAEL----------AKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPF 310 (755)
T ss_pred HHHHHHhCCcchHHHHHHHHHHHHHHH----------HhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEec
Confidence 999999999999999999999998888 8899999999999999999999999999999999999998743
Q ss_pred CeecCCCCchHHHHHHHHhhhhhhhhhhhhhccccCCCCccchhhhhcccCCCCccccccCCCCcCcchhcccCCCCCCC
Q 006493 440 GTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPN 519 (643)
Q Consensus 440 ~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 519 (643)
+..+ +
T Consensus 311 ~~~~----~----------------------------------------------------------------------- 315 (755)
T TIGR01647 311 FNGF----D----------------------------------------------------------------------- 315 (755)
T ss_pred CCCC----C-----------------------------------------------------------------------
Confidence 2100 0
Q ss_pred hhhHHHHHHHHhhcccccccccCCCCceeEecCChhHHHHHHHHHHcCcEEEEecCCeEEEEecCCCCCCcceeEEEEEE
Q 006493 520 VDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILN 599 (643)
Q Consensus 520 ~~~~~~~~~~lalch~~~~~~~~~~~~~~y~~gsp~E~All~~a~~~g~~~~~r~~~~~~~~~~~~~~g~~~~~~~~il~ 599 (643)
..+++...++|+. + ..++|.|.|+++++.+.+. ....+++++
T Consensus 316 ---~~~~l~~a~~~~~------~-------~~~~pi~~Ai~~~~~~~~~----------------------~~~~~~~~~ 357 (755)
T TIGR01647 316 ---KDDVLLYAALASR------E-------EDQDAIDTAVLGSAKDLKE----------------------ARDGYKVLE 357 (755)
T ss_pred ---HHHHHHHHHHhCC------C-------CCCChHHHHHHHHHHHhHH----------------------HHhcCceEE
Confidence 0123344444531 1 1369999999999876431 124577888
Q ss_pred eecCCCCCceEEEEEEcCC-CeEEEEEeccchhhhhhhhc
Q 006493 600 LLDFTSKRKRMSVIVRDED-GQILLLCKGADRLASPLLFN 638 (643)
Q Consensus 600 ~~~F~S~rKrMSViv~~~~-g~~~l~~KGA~e~Il~~c~~ 638 (643)
.+||+|.+|+|+++++.++ |+.++++|||||.|+++|+.
T Consensus 358 ~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~ 397 (755)
T TIGR01647 358 FVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDN 397 (755)
T ss_pred EeccCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCC
Confidence 9999999999999998764 78889999999999999964
No 16
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=100.00 E-value=3.9e-56 Score=518.56 Aligned_cols=403 Identities=18% Similarity=0.163 Sum_probs=314.8
Q ss_pred CccccCCCCCCCceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchhhhHHHHHHHHHHHHHHHHHH
Q 006493 45 HMHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALED 124 (643)
Q Consensus 45 ~~~~~~~~~yg~N~i~~~k~~~~~flp~~l~~~f~~~~~~~~l~~~il~~~~~~~~~~~~~~~~l~~vl~i~~i~~~~~~ 124 (643)
++.++|+++||+|+++.++.+.++ +.++++|+++++++++++++++++. .+|...+ .++++++++.+.+.+++
T Consensus 37 ~ev~~r~~~~G~N~l~~~~~~~~~---~~~~~~~~~p~~~iL~~~a~ls~~~---~~~~~~~-iI~~iv~~~~~i~~~~e 109 (867)
T TIGR01524 37 VEVTERLAEFGPNQTVEEKKVPNL---RLLIRAFNNPFIYILAMLMGVSYLT---DDLEATV-IIALMVLASGLLGFIQE 109 (867)
T ss_pred HHHHHHHHhcCCCcCCCCCCCCHH---HHHHHHHhhHHHHHHHHHHHHHHHH---hhHHHHH-HhhhHHHHHHHHHHHHH
Confidence 456778999999999998765442 8899999999999999999999874 4444444 45567778888889999
Q ss_pred HHHhhhhhhh---cceEEEEEeC------CCeEEEeeeeccccCcEEEeccCcccCccEEEEeecCCCCeEEEEccCCCC
Q 006493 125 WRRFMQDKEV---NARKVSVHVG------NGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDG 195 (643)
Q Consensus 125 ~~~~k~~~~~---n~~~~~V~~r------~g~~~~i~~~~LvvGDIV~l~~ge~iPaD~ill~~s~~~g~~~Vdes~LtG 195 (643)
++.+++.+.+ .+.+++|+ | ||++++|+++||+|||||.|++||.|||||+|+++++ +.||||+|||
T Consensus 110 ~~a~ka~~~L~~l~~~~~~V~-R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~li~g~~----l~VDES~LTG 184 (867)
T TIGR01524 110 SRAERAAYALKNMVKNTATVL-RVINENGNGSMDEVPIDALVPGDLIELAAGDIIPADARVISARD----LFINQSALTG 184 (867)
T ss_pred HHHHHHHHHHhhhccCeeEEE-EecccCCCCeEEEEEhhcCCCCCEEEECCCCEEcccEEEEecCc----eEEEcccccC
Confidence 9988776544 45789999 7 8999999999999999999999999999999999765 7999999999
Q ss_pred ccceeeecccccCCCCCchhhhcccceEEEeeCCCCCceEEEEEEEECCeeeccCCCCeEEeceeeecCCeEEEEEEEec
Q 006493 196 ETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTG 275 (643)
Q Consensus 196 Es~p~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~ni~~rgs~l~~t~~~~gvVv~tG 275 (643)
||.|+.|.+++.... +....+..+..|+||.+.+|+ +.++|++||
T Consensus 185 ES~PV~K~~~~~~~~--------------~~~~~~~~n~vfaGT~v~~G~---------------------~~~~V~~tG 229 (867)
T TIGR01524 185 ESLPVEKFVEDKRAR--------------DPEILERENLCFMGTNVLSGH---------------------AQAVVLATG 229 (867)
T ss_pred CCCcccccCCccccc--------------cccccccccceecCCeEEEeE---------------------EEEEEEEEc
Confidence 999999998753200 001112334678999998888 999999999
Q ss_pred cccceeccc---CCCCCccChHHHHHHHHHHHHHHHHHHHHHHHHHHhhheeccCCCCccccCCCCCccccCCCCCchhH
Q 006493 276 HDSKVMQNA---TTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPG 352 (643)
Q Consensus 276 ~~Tk~~~~~---~~~~~k~s~l~~~~~~~~~~~~~~~l~~~~i~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 352 (643)
.+|.+++.. .. ...++++++.++++..++..+.++++++.++++.+.. ..|
T Consensus 230 ~~T~~gki~~~v~~-~~~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~-----~~~-------------------- 283 (867)
T TIGR01524 230 SSTWFGSLAIAATE-RRGQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGLMK-----GDW-------------------- 283 (867)
T ss_pred CccHHHHHHHHhhC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHheehHHHhc-----CCH--------------------
Confidence 999776543 33 4457899999999999988888877776655543211 012
Q ss_pred HHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccccccccCCCCceeccCcchhhcccccEEEEcCCCccccCceE
Q 006493 353 LAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMD 432 (643)
Q Consensus 353 ~~~~~~~i~ll~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTLT~n~m~ 432 (643)
...+..++.+++.++|++||++++++...++.++ +++++++|++.++|+||++++||||||||||+|+|+
T Consensus 284 ~~~~~~al~l~v~~iP~~Lp~~vt~~la~g~~~m----------ak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~ 353 (867)
T TIGR01524 284 LEAFLFALAVAVGLTPEMLPMIVSSNLAKGAINM----------SKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIE 353 (867)
T ss_pred HHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHH----------HhCCcEEccchhhhhccCccEEEecCCCccccCeEE
Confidence 2467778899999999999999999999988888 889999999999999999999999999999999999
Q ss_pred EEEEEEcCeecCCCCchHHHHHHHHhhhhhhhhhhhhhccccCCCCccchhhhhcccCCCCccccccCCCCcCcchhccc
Q 006493 433 FLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDG 512 (643)
Q Consensus 433 v~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 512 (643)
+.+++... + .
T Consensus 354 v~~~~~~~---~---~---------------------------------------------------------------- 363 (867)
T TIGR01524 354 LEKHIDSS---G---E---------------------------------------------------------------- 363 (867)
T ss_pred EEEEecCC---C---C----------------------------------------------------------------
Confidence 98864100 0 0
Q ss_pred CCCCCCChhhHHHHHHHHhhcccccccccCCCCceeEecCChhHHHHHHHHHHcCcEEEEecCCeEEEEecCCCCCCcce
Q 006493 513 NWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVE 592 (643)
Q Consensus 513 ~~~~~~~~~~~~~~~~~lalch~~~~~~~~~~~~~~y~~gsp~E~All~~a~~~g~~~~~r~~~~~~~~~~~~~~g~~~~ 592 (643)
. .++++...++|... + . ..++|.|.|+++++...+... .+
T Consensus 364 ------~---~~~~l~~a~l~~~~--~--~-------~~~~p~~~Al~~~~~~~~~~~--------------------~~ 403 (867)
T TIGR01524 364 ------T---SERVLKMAWLNSYF--Q--T-------GWKNVLDHAVLAKLDESAARQ--------------------TA 403 (867)
T ss_pred ------C---HHHHHHHHHHhCCC--C--C-------CCCChHHHHHHHHHHhhchhh--------------------Hh
Confidence 0 01233333443321 1 0 136999999999987532110 13
Q ss_pred eEEEEEEeecCCCCCceEEEEEEcCCCeEEEEEeccchhhhhhhhccC
Q 006493 593 REFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADRLASPLLFNFL 640 (643)
Q Consensus 593 ~~~~il~~~~F~S~rKrMSViv~~~~g~~~l~~KGA~e~Il~~c~~~~ 640 (643)
..++.++.+||||+||||+++++++++..++|+|||||.|+++|+++.
T Consensus 404 ~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~ 451 (867)
T TIGR01524 404 SRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKR 451 (867)
T ss_pred hcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhh
Confidence 457788899999999999999987766788999999999999998753
No 17
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=100.00 E-value=3e-55 Score=511.63 Aligned_cols=416 Identities=18% Similarity=0.208 Sum_probs=311.9
Q ss_pred CccccCCCCCCCceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHHhhcc--CCC------CCchhhhHHHHHHHHHH
Q 006493 45 HMHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTP--LSP------FSPVSMLLPLAIVVGVS 116 (643)
Q Consensus 45 ~~~~~~~~~yg~N~i~~~k~~~~~flp~~l~~~f~~~~~~~~l~~~il~~~~--~~~------~~~~~~~~~l~~vl~i~ 116 (643)
++.++|+++||+|+++.++.+.++ +.+++||++++.++++++++++++. +.+ .+|...++ ++++++++
T Consensus 49 ~ea~~rl~~~G~N~l~~~~~~~~~---~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~i-I~~~v~l~ 124 (903)
T PRK15122 49 EDAAERLQRYGPNEVAHEKPPHAL---VQLLQAFNNPFIYVLMVLAAISFFTDYWLPLRRGEETDLTGVII-ILTMVLLS 124 (903)
T ss_pred HHHHHHHHhcCCCCCCCCCCCCHH---HHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCCccccHhHHHH-HHHHHHHH
Confidence 456778999999999988766443 7899999999999999999999874 111 23444444 45667788
Q ss_pred HHHHHHHHHHHhhhhhhhc---ceEEEEEeCC------CeEEEeeeeccccCcEEEeccCcccCccEEEEeecCCCCeEE
Q 006493 117 MAKEALEDWRRFMQDKEVN---ARKVSVHVGN------GVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICY 187 (643)
Q Consensus 117 ~i~~~~~~~~~~k~~~~~n---~~~~~V~~r~------g~~~~i~~~~LvvGDIV~l~~ge~iPaD~ill~~s~~~g~~~ 187 (643)
.+.+++++++.+++.+.+. +.+++|+ || |++++|++++|+|||+|.|++||.|||||+|+++++ +.
T Consensus 125 ~~i~~~qe~~a~~a~~~L~~l~~~~~~V~-Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~IPaDg~li~g~~----l~ 199 (903)
T PRK15122 125 GLLRFWQEFRSNKAAEALKAMVRTTATVL-RRGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIESRD----LF 199 (903)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCceEEE-ECCccCCCCeEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcCc----eE
Confidence 8889999999988766554 4789999 77 589999999999999999999999999999999765 79
Q ss_pred EEccCCCCccceeeecccccC-CCCCchhhhcccceEEEeeCCCCCceEEEEEEEECCeeeccCCCCeEEeceeeecCCe
Q 006493 188 VETMNLDGETNLKVKRAMEAT-SPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAH 266 (643)
Q Consensus 188 Vdes~LtGEs~p~~K~~~~~~-~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~ni~~rgs~l~~t~~ 266 (643)
||||+|||||.|+.|.+.... .... ... ..+. ..+..+....+|+||.+.+|+
T Consensus 200 VDES~LTGES~PV~K~~~~~~~~~~~-~~~---~~~~-~~~~~~~~n~vfaGT~V~~G~--------------------- 253 (903)
T PRK15122 200 ISQAVLTGEALPVEKYDTLGAVAGKS-ADA---LADD-EGSLLDLPNICFMGTNVVSGT--------------------- 253 (903)
T ss_pred EEccccCCCCcceeeecccccccccc-ccc---cccc-cCCcccccceEEeCCEEEeee---------------------
Confidence 999999999999999862110 0000 000 0000 000112334678888888888
Q ss_pred EEEEEEEeccccceecccCC--CCCccChHHHHHHHHHHHHHHHHHHHHHHHHHHhhheeccCCCCccccCCCCCccccC
Q 006493 267 VYGSVIFTGHDSKVMQNATT--SPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFN 344 (643)
Q Consensus 267 ~~gvVv~tG~~Tk~~~~~~~--~~~k~s~l~~~~~~~~~~~~~~~l~~~~i~~i~~~~~~~~~~~~~~~l~~~~~~~~~~ 344 (643)
+.++|++||.+|.+++.... .+..++++++.++++...+..+.++++.+.+++..+.. ..|
T Consensus 254 ~~~~V~atG~~T~~gkI~~~v~~~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~~~-----~~~------------ 316 (903)
T PRK15122 254 ATAVVVATGSRTYFGSLAKSIVGTRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGFTK-----GDW------------ 316 (903)
T ss_pred EEEEEEEeccccHhhHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcc-----CCH------------
Confidence 99999999999987665432 13456899999999988877666666555444332211 112
Q ss_pred CCCCchhHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccccccccCCCCceeccCcchhhcccccEEEEcCCC
Q 006493 345 PGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTG 424 (643)
Q Consensus 345 ~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTG 424 (643)
...+..++.+++.++|++||++++++...++.++ +++++++|++.++|+||++++|||||||
T Consensus 317 --------~~~l~~aisl~V~~~Pe~Lp~~vt~~La~g~~~m----------ak~~ilVk~l~avE~Lg~v~vIc~DKTG 378 (903)
T PRK15122 317 --------LEALLFALAVAVGLTPEMLPMIVSSNLAKGAIAM----------ARRKVVVKRLNAIQNFGAMDVLCTDKTG 378 (903)
T ss_pred --------HHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHH----------HHcCCeecccchhhhhcCCcEEEecCCc
Confidence 2466778999999999999999999998888888 8899999999999999999999999999
Q ss_pred ccccCceEEEEEEEcCeecCCCCchHHHHHHHHhhhhhhhhhhhhhccccCCCCccchhhhhcccCCCCccccccCCCCc
Q 006493 425 TLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNF 504 (643)
Q Consensus 425 TLT~n~m~v~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 504 (643)
|||+|+|++.+++..+. . .
T Consensus 379 TLT~~~m~V~~~~~~~~---~--~-------------------------------------------------------- 397 (903)
T PRK15122 379 TLTQDRIILEHHLDVSG---R--K-------------------------------------------------------- 397 (903)
T ss_pred ccccCeEEEEEEEcCCC---C--C--------------------------------------------------------
Confidence 99999999998652110 0 0
Q ss_pred CcchhcccCCCCCCChhhHHHHHHHHhhcccccccccCCCCceeEecCChhHHHHHHHHHHcCcEEEEecCCeEEEEecC
Q 006493 505 EDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERY 584 (643)
Q Consensus 505 ~d~~l~~~~~~~~~~~~~~~~~~~~lalch~~~~~~~~~~~~~~y~~gsp~E~All~~a~~~g~~~~~r~~~~~~~~~~~ 584 (643)
. ++++...++| +.. + .+ .++|.|.|+++++.+.|...
T Consensus 398 --------------~----~~~l~~a~l~-s~~-~----~~-----~~~p~e~All~~a~~~~~~~-------------- 434 (903)
T PRK15122 398 --------------D----ERVLQLAWLN-SFH-Q----SG-----MKNLMDQAVVAFAEGNPEIV-------------- 434 (903)
T ss_pred --------------h----HHHHHHHHHh-CCC-C----CC-----CCChHHHHHHHHHHHcCchh--------------
Confidence 0 0122323333 110 1 11 37999999999998866421
Q ss_pred CCCCCcceeEEEEEEeecCCCCCceEEEEEEcCCCeEEEEEeccchhhhhhhhccC
Q 006493 585 PPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADRLASPLLFNFL 640 (643)
Q Consensus 585 ~~~g~~~~~~~~il~~~~F~S~rKrMSViv~~~~g~~~l~~KGA~e~Il~~c~~~~ 640 (643)
....|+.++.+||+|.|||||+++++.+|++++|+|||||.|+++|++++
T Consensus 435 ------~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~ 484 (903)
T PRK15122 435 ------KPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVR 484 (903)
T ss_pred ------hhhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhh
Confidence 02356788899999999999999998778899999999999999998753
No 18
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-54 Score=473.92 Aligned_cols=468 Identities=19% Similarity=0.215 Sum_probs=337.5
Q ss_pred CccccCCCCCCCceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchhhhHHHHHHHHHHHHHHHHHH
Q 006493 45 HMHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALED 124 (643)
Q Consensus 45 ~~~~~~~~~yg~N~i~~~k~~~~~flp~~l~~~f~~~~~~~~l~~~il~~~~~~~~~~~~~~~~l~~vl~i~~i~~~~~~ 124 (643)
++..+|+.-||+|.|..+..+.+ .+++++..+|+++++.+..++|.. .+|+.++..++++.+.+++...+|.
T Consensus 164 ~~~~~r~~iyG~N~i~l~ik~i~----~iLv~EvL~PfYlFQ~fSv~lW~~----d~Y~~YA~cI~iisv~Si~~sv~e~ 235 (1140)
T KOG0208|consen 164 QEIIDRRIIYGRNVISLPIKSIS----QILVKEVLNPFYLFQAFSVALWLA----DSYYYYAFCIVIISVYSIVLSVYET 235 (1140)
T ss_pred HHHHhHHhhcCCceeeeecccHH----HHHHHhccchHHHHHhHHhhhhhc----ccchhhhhHHHHHHHHHHHHHHHHH
Confidence 44567899999999999999887 889999999999999999999987 5677777777778888888889999
Q ss_pred HHHhhhhhhhcc--eEEEEEeCCCeEEEeeeeccccCcEEEecc-CcccCccEEEEeecCCCCeEEEEccCCCCccceee
Q 006493 125 WRRFMQDKEVNA--RKVSVHVGNGVFSYKPWEKIQVGDIVKVEK-DQFFPADLLFLSSSYEDGICYVETMNLDGETNLKV 201 (643)
Q Consensus 125 ~~~~k~~~~~n~--~~~~V~~r~g~~~~i~~~~LvvGDIV~l~~-ge~iPaD~ill~~s~~~g~~~Vdes~LtGEs~p~~ 201 (643)
.+..+..+++-. .+|+|+ |+|.|++|.++|||||||+.+.+ +-..|||++|++|+ |.||||+|||||.|+.
T Consensus 236 r~qs~rlr~mv~~~~~V~V~-R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~g~-----civNEsmLTGESVPv~ 309 (1140)
T KOG0208|consen 236 RKQSIRLRSMVKFTCPVTVI-RDGFWETVDSSELVPGDILYIPPPGKIMPCDALLISGD-----CIVNESMLTGESVPVT 309 (1140)
T ss_pred HHHHHHHHHHhcCCceEEEE-ECCEEEEEeccccccccEEEECCCCeEeecceEEEeCc-----EEeecccccCCccccc
Confidence 888888888765 479999 89999999999999999999998 89999999999955 9999999999999999
Q ss_pred ecccccCCCCCchhhhcccceEEEeeCCCCCceEEEEEEEECCeeeccCCCCeEEeceeeecCCeEEEEEEEecccccee
Q 006493 202 KRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVM 281 (643)
Q Consensus 202 K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~ni~~rgs~l~~t~~~~gvVv~tG~~Tk~~ 281 (643)
|.|.+.-... +.....+...+.++.+|.||.+++.+.. -.+.+.|+|++||..|.-+
T Consensus 310 K~~l~~~~~~--------~~~~~~~~~~~~rh~lfcGT~vlq~r~~---------------~g~~v~a~V~RTGF~T~KG 366 (1140)
T KOG0208|consen 310 KTPLPMGTDS--------LDSITISMSTNSRHTLFCGTKVLQARAY---------------LGGPVLAMVLRTGFSTTKG 366 (1140)
T ss_pred ccCCcccccc--------CcCeeechhhcCcceeeccceEEEeecC---------------CCCceEEEEEecccccccc
Confidence 9998622100 1112333445677889999999964411 1234999999999999777
Q ss_pred cccCCCC-CccChHHHHHHHHHHHHHHHHHHHHHHHHHHhhheeccCCCCccccCCCCCccccCCCCCchhHHHHHHHHH
Q 006493 282 QNATTSP-SKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTAL 360 (643)
Q Consensus 282 ~~~~~~~-~k~s~l~~~~~~~~~~~~~~~l~~~~i~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i 360 (643)
+..+... .|+.++ ++.+-+..++.++.++|++.+++..+..... + ...-..+++++
T Consensus 367 qLVRsilyPkP~~f--kfyrds~~fi~~l~~ia~~gfiy~~i~l~~~-------g--------------~~~~~iiirsL 423 (1140)
T KOG0208|consen 367 QLVRSILYPKPVNF--KFYRDSFKFILFLVIIALIGFIYTAIVLNLL-------G--------------VPLKTIIIRSL 423 (1140)
T ss_pred HHHHhhcCCCCccc--HHHHHHHHHHHHHHHHHHHHHHHHhHhHHHc-------C--------------CCHHHHhhhhh
Confidence 7665432 222333 3333334444445555555555444322211 0 11124778999
Q ss_pred HHHhccccchhHHHHHHHHHHHHHHHhcccccccccCCCCceeccCcchhhcccccEEEEcCCCccccCceEEEEEEEcC
Q 006493 361 ILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAG 440 (643)
Q Consensus 361 ~ll~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~ 440 (643)
.++...+|++||.++++....+..++ +|++|.|-++..+...|+++.+|||||||||++.+++..+..-.
T Consensus 424 DliTi~VPPALPAaltvG~~~a~~RL----------kkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~ 493 (1140)
T KOG0208|consen 424 DLITIVVPPALPAALTVGIIYAQSRL----------KKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVE 493 (1140)
T ss_pred cEEEEecCCCchhhhhHHHHHHHHHH----------HhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEecc
Confidence 99999999999999999999988898 89999999999999999999999999999999999999887532
Q ss_pred eecCCCCchHHHHHHHHhhhhhhhhhhhhhccccCCCCccchhhhhcccCCCCccccccCCCCcCcchhcccCCCCCCCh
Q 006493 441 TAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNV 520 (643)
Q Consensus 441 ~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 520 (643)
..-.. ..+...... + . ...+ .+.. . +...
T Consensus 494 ~~~~~-~~~~~~~~~-----------------------------~--------~------~~~~-----~~l~-~-~~~~ 522 (1140)
T KOG0208|consen 494 RNVDD-GPELKVVTE-----------------------------D--------S------LQLF-----YKLS-L-RSSS 522 (1140)
T ss_pred ccccc-cchhhhhhh-----------------------------h--------h------ccce-----eecc-c-cccC
Confidence 21000 000000000 0 0 0000 0000 0 0111
Q ss_pred hhHHHHHHHHhhcccccccccCCCCceeEecCChhHHHHHHHHHHcCcEEEEec--------CCeE---EEEecCC-CCC
Q 006493 521 DTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRT--------QSSV---FIRERYP-PKG 588 (643)
Q Consensus 521 ~~~~~~~~~lalch~~~~~~~~~~~~~~y~~gsp~E~All~~a~~~g~~~~~r~--------~~~~---~~~~~~~-~~g 588 (643)
.....|..++|.||++.... |.+ .|||.|.-|+++ .||.+++.. .+++ .++...+ .++
T Consensus 523 ~~~~~~~~a~atCHSL~~v~----g~l---~GDPLdlkmfe~---t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~ 592 (1140)
T KOG0208|consen 523 LPMGNLVAAMATCHSLTLVD----GTL---VGDPLDLKMFES---TGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQ 592 (1140)
T ss_pred CchHHHHHHHhhhceeEEeC----Cee---ccCceeeeeeec---cceEEEeccccchhhhhhCCccCCEeCCCcccccC
Confidence 12457889999999887653 333 489999999887 788875521 0111 1111100 011
Q ss_pred Cc--ceeEEEEEEeecCCCCCceEEEEEEcC-CCeEEEEEeccchhhhhhhhccCCCC
Q 006493 589 QP--VEREFKILNLLDFTSKRKRMSVIVRDE-DGQILLLCKGADRLASPLLFNFLTPS 643 (643)
Q Consensus 589 ~~--~~~~~~il~~~~F~S~rKrMSViv~~~-~g~~~l~~KGA~e~Il~~c~~~~~~~ 643 (643)
.. -...+.+++.|||+|..+||||||.++ +.+.++|+|||||.|.+.|++...|.
T Consensus 593 ~t~~~~~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p~tvP~ 650 (1140)
T KOG0208|consen 593 STECGEGEISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKPETVPA 650 (1140)
T ss_pred CCcCCCcceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCcccCCc
Confidence 00 022699999999999999999999997 56789999999999999999987663
No 19
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.1e-48 Score=415.89 Aligned_cols=433 Identities=20% Similarity=0.187 Sum_probs=339.5
Q ss_pred ccCCCCCCCceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHHhhcc--CCC-------CCchhhhHHHHHHHHHHHH
Q 006493 48 KKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTP--LSP-------FSPVSMLLPLAIVVGVSMA 118 (643)
Q Consensus 48 ~~~~~~yg~N~i~~~k~~~~~flp~~l~~~f~~~~~~~~l~~~il~~~~--~~~-------~~~~~~~~~l~~vl~i~~i 118 (643)
.+++.+-|+|.++++|.+.-+ ..+..|++..+.+.+++.++++++. +.+ .+.....+.|+.+++++.+
T Consensus 65 ~~~L~rdG~NaL~Ppk~t~~w---ikf~kq~f~~~~ill~~~a~l~~~~y~~~~s~~~~~~~~nly~giiL~~vv~vtg~ 141 (1019)
T KOG0203|consen 65 AEKLARDGPNALTPPKTTPEW---IKFLRQLFGGFSILLWIGAILCFVAYGIQASTEDDPSDDNLYLGIVLAAVVIVTGL 141 (1019)
T ss_pred HhhhccCCCCCCCCCCCChHH---HHHHHHHhhhHHHHHHHHHHHHHHHHhhhcccCCCCCCcceEEEEEEEEEEEEEec
Confidence 456889999999999987643 5688999999999999999998865 111 1112222344456666777
Q ss_pred HHHHHHHHHhhh---hhhhcceEEEEEeCCCeEEEeeeeccccCcEEEeccCcccCccEEEEeecCCCCeEEEEccCCCC
Q 006493 119 KEALEDWRRFMQ---DKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDG 195 (643)
Q Consensus 119 ~~~~~~~~~~k~---~~~~n~~~~~V~~r~g~~~~i~~~~LvvGDIV~l~~ge~iPaD~ill~~s~~~g~~~Vdes~LtG 195 (643)
..++++.+..+- .+.+-++.++|+ |||....+..++|||||+|.++-|++||||++++++.+ |++|+|+|||
T Consensus 142 ~~~~qe~ks~~im~sF~~l~P~~~~Vi-Rdg~k~~i~~eelVvGD~v~vk~GdrVPADiRiis~~g----~~vdnsslTG 216 (1019)
T KOG0203|consen 142 FSYYQEAKSSKIMDSFKNLVPQQALVI-RDGEKMTINAEELVVGDLVEVKGGDRVPADIRIISATG----CKVDNSSLTG 216 (1019)
T ss_pred CCCccchhhHHHHHHHhccchhhheee-ecceeEEechhhcccccceeeccCCcccceeEEEEecc----eeEecccccc
Confidence 777777766654 455667899999 99999999999999999999999999999999999997 9999999999
Q ss_pred ccceeeecccccCCCCCchhhhcccceEEEeeCCCCCceEEEEEEEECCeeeccCCCCeEEeceeeecCCeEEEEEEEec
Q 006493 196 ETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTG 275 (643)
Q Consensus 196 Es~p~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~ni~~rgs~l~~t~~~~gvVv~tG 275 (643)
||.|..+.+...... .-..++..|.+|.+++|. ++|+|++||
T Consensus 217 esEP~~~~~~~t~~~-----------------~~Et~Ni~f~st~~veG~---------------------~~givi~tG 258 (1019)
T KOG0203|consen 217 ESEPQTRSPEFTHEN-----------------PLETRNIAFFSTNCVEGT---------------------GRGIVIATG 258 (1019)
T ss_pred ccCCccCCccccccC-----------------chhheeeeeeeeEEecce---------------------EEEEEEecC
Confidence 999988876533210 113345679999999998 999999999
Q ss_pred cccceecccC---CCCCccChHHHHHHHHHHHHHHHHHHHHHHHHHHhhheeccCCCCccccCCCCCccccCCCCCchhH
Q 006493 276 HDSKVMQNAT---TSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPG 352 (643)
Q Consensus 276 ~~Tk~~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~l~~~~i~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 352 (643)
.+|.+++.+. .....++++++.+++++.++..+.+++++..+++.....+ .|
T Consensus 259 d~Tv~G~ia~l~~~~~~~~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~~gy-----~~-------------------- 313 (1019)
T KOG0203|consen 259 DRTVMGRIASLASGLEDGKTPIAKEIEHFIHIITGVAIFLGISFFILALILGY-----EW-------------------- 313 (1019)
T ss_pred CceEEeehhhhhccCCCCCCcchhhhhchHHHHHHHHHHHHHHHHHHHHhhcc-----hh--------------------
Confidence 9998887654 4456789999999999999999888888888776654322 12
Q ss_pred HHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccccccccCCCCceeccCcchhhcccccEEEEcCCCccccCceE
Q 006493 353 LAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMD 432 (643)
Q Consensus 353 ~~~~~~~i~ll~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTLT~n~m~ 432 (643)
+..+...+.+++.-+|.+|+++++.+...-+++| +++++++|++.+.|+||...+||+|||||||+|.|+
T Consensus 314 l~avv~~i~iivAnvPeGL~~tvTv~LtltakrM----------a~Knc~vknLeavetlGsts~I~SDktGTlTqnrMt 383 (1019)
T KOG0203|consen 314 LRAVVFLIGIIVANVPEGLLATVTVCLTLTAKRM----------ARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMT 383 (1019)
T ss_pred HHHhhhhheeEEecCcCCccceehhhHHHHHHHH----------hhceeEEeeeeheeecccceeEeecceeeEEecceE
Confidence 3455568889999999999999999999989998 899999999999999999999999999999999999
Q ss_pred EEEEEEcCeecCCCCchHHHHHHHHhhhhhhhhhhhhhccccCCCCccchhhhhcccCCCCccccccCCCCcCcchhccc
Q 006493 433 FLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDG 512 (643)
Q Consensus 433 v~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 512 (643)
|.++|.++.....+..+... +.
T Consensus 384 Vahlw~d~~i~~~d~~~~~~------------------------------------------------~~---------- 405 (1019)
T KOG0203|consen 384 VAHLWFDNQIHEADTTEDQS------------------------------------------------GQ---------- 405 (1019)
T ss_pred EEeeccCCceeeeechhhhh------------------------------------------------cc----------
Confidence 99999998765443322100 00
Q ss_pred CCCCCCChhhHHHHHHHHhhcccccccccCCCCceeE---ecCChhHHHHHHHHHHcCcEEEEecCCeEEEEecCCCCCC
Q 006493 513 NWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTY---EAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQ 589 (643)
Q Consensus 513 ~~~~~~~~~~~~~~~~~lalch~~~~~~~~~~~~~~y---~~gsp~E~All~~a~~~g~~~~~r~~~~~~~~~~~~~~g~ 589 (643)
.....+..+..+.++..+||.+.....+. +-... ..|++.|.||++++.-.-.....
T Consensus 406 --~~~~~~~~~~~l~r~~~lCn~a~~~~gq~-dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~----------------- 465 (1019)
T KOG0203|consen 406 --SFDKSSATFIALSRIATLCNRAVFKPGQD-DVPVLKRDVAGDASEVALLKFIELILGSVME----------------- 465 (1019)
T ss_pred --cccccCchHHHHHHHHHHhCcceeccccc-CCceeeeeccCCHHHHHHHHHHHHhcchHHH-----------------
Confidence 00112345678899999999997654332 22222 24999999999998753222111
Q ss_pred cceeEEEEEEeecCCCCCceEEEEEEcCC---CeEEEEEeccchhhhhhhhccC
Q 006493 590 PVEREFKILNLLDFTSKRKRMSVIVRDED---GQILLLCKGADRLASPLLFNFL 640 (643)
Q Consensus 590 ~~~~~~~il~~~~F~S~rKrMSViv~~~~---g~~~l~~KGA~e~Il~~c~~~~ 640 (643)
.++.++.+...||+|++|..-.+.+..+ .++.+.+|||||.|+++|+.++
T Consensus 466 -~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l~mKGape~il~~CSTi~ 518 (1019)
T KOG0203|consen 466 -LRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLLVMKGAPERILDRCSTIL 518 (1019)
T ss_pred -HHHhhHHhhcCCcccccceEEEEEecCCCCCccceeeecCChHHHHhhcccee
Confidence 2567888999999999999999988754 5789999999999999998765
No 20
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.1e-47 Score=400.29 Aligned_cols=386 Identities=19% Similarity=0.170 Sum_probs=301.0
Q ss_pred CccccCCCCCCCceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHHhhcc----CCCCCchhhhHHHHHHHHHHHHHH
Q 006493 45 HMHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTP----LSPFSPVSMLLPLAIVVGVSMAKE 120 (643)
Q Consensus 45 ~~~~~~~~~yg~N~i~~~k~~~~~flp~~l~~~f~~~~~~~~l~~~il~~~~----~~~~~~~~~~~~l~~vl~i~~i~~ 120 (643)
++.+.|++.||.|++...|.+.+ +.|+..|.+|..|.+-.++++.... -.|.+|.....+. .++++++...
T Consensus 40 ~E~~eRlk~fG~NkleEkken~~----lKFl~Fm~~PlswVMEaAAimA~~Lang~~~~~DW~DF~gI~-~LLliNsti~ 114 (942)
T KOG0205|consen 40 DEVEERLKIFGPNKLEEKKESKF----LKFLGFMWNPLSWVMEAAAIMAIGLANGGGRPPDWQDFVGIC-CLLLINSTIS 114 (942)
T ss_pred HHHHHHHHhhCchhhhhhhhhHH----HHHHHHHhchHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhh-eeeeecceee
Confidence 45577999999999998888876 6677888999999999999888764 2345677665433 4566888889
Q ss_pred HHHHHHHhhhhhhhcc---eEEEEEeCCCeEEEeeeeccccCcEEEeccCcccCccEEEEeecCCCCeEEEEccCCCCcc
Q 006493 121 ALEDWRRFMQDKEVNA---RKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGET 197 (643)
Q Consensus 121 ~~~~~~~~k~~~~~n~---~~~~V~~r~g~~~~i~~~~LvvGDIV~l~~ge~iPaD~ill~~s~~~g~~~Vdes~LtGEs 197 (643)
++++++.-..-.++.. .+++|+ |||+|.++....||||||+.++.|++||||++||+++. +.||+|.|||||
T Consensus 115 FveE~nAGn~aa~L~a~LA~KakVl-RDGkw~E~eAs~lVPGDIlsik~GdIiPaDaRLl~gD~----LkiDQSAlTGES 189 (942)
T KOG0205|consen 115 FIEENNAGNAAAALMAGLAPKAKVL-RDGKWSEQEASILVPGDILSIKLGDIIPADARLLEGDP----LKIDQSALTGES 189 (942)
T ss_pred eeeccccchHHHHHHhccCcccEEe-ecCeeeeeeccccccCceeeeccCCEecCccceecCCc----cccchhhhcCCc
Confidence 9999998887655543 578999 99999999999999999999999999999999999885 899999999999
Q ss_pred ceeeecccccCCCCCchhhhcccceEEEeeCCCCCceEEEEEEEECCeeeccCCCCeEEeceeeecCCeEEEEEEEeccc
Q 006493 198 NLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHD 277 (643)
Q Consensus 198 ~p~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~ni~~rgs~l~~t~~~~gvVv~tG~~ 277 (643)
.|+.|.+++.+ |+|+.+.+|+ +.++|++||.+
T Consensus 190 LpvtKh~gd~v---------------------------fSgSTcKqGE---------------------~eaVViATg~~ 221 (942)
T KOG0205|consen 190 LPVTKHPGDEV---------------------------FSGSTCKQGE---------------------IEAVVIATGVH 221 (942)
T ss_pred cccccCCCCce---------------------------ecccccccce---------------------EEEEEEEeccc
Confidence 99999999988 9999999999 99999999999
Q ss_pred cceecccC--CCCCccChHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-eeccCCCCccccCCCCCccccCCCCCchhHHH
Q 006493 278 SKVMQNAT--TSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAV-KINYQTPQWWYLKPKETDVYFNPGKPLVPGLA 354 (643)
Q Consensus 278 Tk~~~~~~--~~~~k~s~l~~~~~~~~~~~~~~~l~~~~i~~i~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 354 (643)
|..++-.. .......++++.++.+..++++.+. +.+++-+...+ .+.. -| -.
T Consensus 222 TF~GkAA~LVdst~~~GHFqkVLt~IGn~ci~si~-~g~lie~~vmy~~q~R-----~~-------------------r~ 276 (942)
T KOG0205|consen 222 TFFGKAAHLVDSTNQVGHFQKVLTGIGNFCICSIA-LGMLIEITVMYPIQHR-----LY-------------------RD 276 (942)
T ss_pred eeehhhHHhhcCCCCcccHHHHHHhhhhHHHHHHH-HHHHHHHHhhhhhhhh-----hh-------------------hh
Confidence 98776543 3356678999999988776654333 33322222222 1111 11 01
Q ss_pred HHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccccccccCCCCceeccCcchhhcccccEEEEcCCCccccCceEEE
Q 006493 355 HLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFL 434 (643)
Q Consensus 355 ~~~~~i~ll~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTLT~n~m~v~ 434 (643)
.+-+.+.+++..+|++||..+++..++++.++ ++++++++++.++|+|+.+|++|+|||||||.|++++.
T Consensus 277 ~i~nLlvllIGgiPiamPtVlsvTMAiGs~rL----------aqqgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvd 346 (942)
T KOG0205|consen 277 GIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL----------SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVD 346 (942)
T ss_pred hhhheheeeecccccccceeeeehhhHHHHHH----------HhcccHHHHHHHHHHhhCceEEeecCcCceeecceecC
Confidence 22344556667799999999999999999999 88999999999999999999999999999999999986
Q ss_pred E----EEEcCeecCCCCchHHHHHHHHhhhhhhhhhhhhhccccCCCCccchhhhhcccCCCCccccccCCCCcCcchhc
Q 006493 435 K----CSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLM 510 (643)
Q Consensus 435 ~----~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 510 (643)
+ ++..|.+
T Consensus 347 knl~ev~v~gv~-------------------------------------------------------------------- 358 (942)
T KOG0205|consen 347 KNLIEVFVKGVD-------------------------------------------------------------------- 358 (942)
T ss_pred cCcceeeecCCC--------------------------------------------------------------------
Confidence 4 1111111
Q ss_pred ccCCCCCCChhhHHHHHHHHhhcccccccccCCCCceeEecCChhHHHHHHHHHHcCcEEEEecCCeEEEEecCCCCCCc
Q 006493 511 DGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQP 590 (643)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~~lalch~~~~~~~~~~~~~~y~~gsp~E~All~~a~~~g~~~~~r~~~~~~~~~~~~~~g~~ 590 (643)
. ..++.. .|-....+ ..|..|.|+|...++- + .
T Consensus 359 ---------~---D~~~L~--A~rAsr~e-----------n~DAID~A~v~~L~dP------K----------------e 391 (942)
T KOG0205|consen 359 ---------K---DDVLLT--AARASRKE-----------NQDAIDAAIVGMLADP------K----------------E 391 (942)
T ss_pred ---------h---HHHHHH--HHHHhhhc-----------ChhhHHHHHHHhhcCH------H----------------H
Confidence 0 011111 12222111 2478999999886541 0 0
Q ss_pred ceeEEEEEEeecCCCCCceEEEEEEcCCCeEEEEEeccchhhhhhhhc
Q 006493 591 VEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADRLASPLLFN 638 (643)
Q Consensus 591 ~~~~~~il~~~~F~S~rKrMSViv~~~~g~~~l~~KGA~e~Il~~c~~ 638 (643)
.+..|+.++-+|||+..||-...+.+++|+.+..+|||||-|++.|+.
T Consensus 392 ara~ikevhF~PFnPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~ 439 (942)
T KOG0205|consen 392 ARAGIKEVHFLPFNPVDKRTALTYIDPDGNWHRVSKGAPEQILKLCNE 439 (942)
T ss_pred HhhCceEEeeccCCccccceEEEEECCCCCEEEecCCChHHHHHHhhc
Confidence 256799999999999999999999999999999999999999999964
No 21
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5e-46 Score=398.41 Aligned_cols=430 Identities=19% Similarity=0.237 Sum_probs=299.6
Q ss_pred CCCCCCceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHhhh
Q 006493 51 PLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDWRRFMQ 130 (643)
Q Consensus 51 ~~~yg~N~i~~~k~~~~~flp~~l~~~f~~~~~~~~l~~~il~~~~~~~~~~~~~~~~l~~vl~i~~i~~~~~~~~~~k~ 130 (643)
..+||+|+.....+++- .++.|.-.-|+++|+.++..+|+.- ..||..++.|++++.+-+. -..+..+.-+.
T Consensus 173 ~~~~G~N~fdi~vPtF~----eLFkE~A~aPfFVFQVFcvgLWCLD---eyWYySlFtLfMli~fE~t-lV~Qrm~~lse 244 (1160)
T KOG0209|consen 173 KHKYGKNKFDIVVPTFS----ELFKEHAVAPFFVFQVFCVGLWCLD---EYWYYSLFTLFMLIAFEAT-LVKQRMRTLSE 244 (1160)
T ss_pred HHHhcCCccccCCccHH----HHHHHhccCceeeHhHHhHHHHHhH---HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 45699999999998875 7888888899999999999999974 5577777666555544332 22333333334
Q ss_pred hhhhcc--eEEEEEeCCCeEEEeeeeccccCcEEEecc---CcccCccEEEEeecCCCCeEEEEccCCCCccceeeeccc
Q 006493 131 DKEVNA--RKVSVHVGNGVFSYKPWEKIQVGDIVKVEK---DQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRAM 205 (643)
Q Consensus 131 ~~~~n~--~~~~V~~r~g~~~~i~~~~LvvGDIV~l~~---ge~iPaD~ill~~s~~~g~~~Vdes~LtGEs~p~~K~~~ 205 (643)
.|.+.+ ..+.|+ |+++|+.+.+.||.|||+|.|.. ...||||.+||.|+ |.|||++|||||.|..|.+.
T Consensus 245 ~R~Mg~kpy~I~v~-R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~Gs-----ciVnEaMLtGESvPl~KE~I 318 (1160)
T KOG0209|consen 245 FRTMGNKPYTINVY-RNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLRGS-----CIVNEAMLTGESVPLMKESI 318 (1160)
T ss_pred HHhcCCCceEEEEE-ecCcceeccccccCCCceEEeccCcccCcCCceEEEEecc-----eeechhhhcCCCcccccccc
Confidence 555544 568899 89999999999999999999986 66799999999966 99999999999999999988
Q ss_pred ccCCCCCchhhhcccceEEEeeCCCCCceEEEEEEEECCeeeccCCCCeEEeceeee-cCCeEEEEEEEeccccceeccc
Q 006493 206 EATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLR-NTAHVYGSVIFTGHDSKVMQNA 284 (643)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~ni~~rgs~l~-~t~~~~gvVv~tG~~Tk~~~~~ 284 (643)
.... .+ ..+..+...+.+.+|.||.+++-..-. -++++ ..+-+.++|++||.+|..++..
T Consensus 319 e~~~----~d------~~ld~~~d~k~hVlfGGTkivQht~p~---------~~slk~pDggc~a~VlrTGFeTSQGkLv 379 (1160)
T KOG0209|consen 319 ELRD----SD------DILDIDRDDKLHVLFGGTKIVQHTPPK---------KASLKTPDGGCVAYVLRTGFETSQGKLV 379 (1160)
T ss_pred ccCC----hh------hhcccccccceEEEEcCceEEEecCCc---------cccccCCCCCeEEEEEeccccccCCcee
Confidence 6552 11 122333444567889999998532100 00111 1233999999999999655544
Q ss_pred CC---CCCccChHHHHHHHHHHHHHHHHHHHHHHHHHHhhheec--cCCCCccccCCCCCccccCCCCCchhHHHHHHHH
Q 006493 285 TT---SPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKIN--YQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTA 359 (643)
Q Consensus 285 ~~---~~~k~s~l~~~~~~~~~~~~~~~l~~~~i~~i~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (643)
+. ...+-+.- |+-..+++++++++|++++. +.|.. ......-| ..|+-|
T Consensus 380 Rtilf~aervTaN----n~Etf~FILFLlVFAiaAa~--Yvwv~Gskd~~RsrY--------------------KL~LeC 433 (1160)
T KOG0209|consen 380 RTILFSAERVTAN----NRETFIFILFLLVFAIAAAG--YVWVEGSKDPTRSRY--------------------KLFLEC 433 (1160)
T ss_pred eeEEecceeeeec----cHHHHHHHHHHHHHHHHhhh--eEEEecccCcchhhh--------------------heeeee
Confidence 32 12222211 22234444556666665543 22321 11111111 366778
Q ss_pred HHHHhccccchhHHHHHHHHHHHHHHHhcccccccccCCCCceeccCcchhhcccccEEEEcCCCccccCceEEEEEEEc
Q 006493 360 LILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVA 439 (643)
Q Consensus 360 i~ll~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~ 439 (643)
..++...+|+.||+.++++.-.....+ ++.++.|..+-.+.-+|+||.+|||||||||+..|.|.++.-.
T Consensus 434 ~LIlTSVvPpELPmELSmAVNsSL~AL----------ak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~ 503 (1160)
T KOG0209|consen 434 TLILTSVVPPELPMELSMAVNSSLIAL----------AKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGL 503 (1160)
T ss_pred eEEEeccCCCCCchhhhHHHHHHHHHH----------HHhceeecCccccccCCceeEEEecCCCccccccEEEEecccc
Confidence 889999999999998887755444444 7889999999999999999999999999999999999976421
Q ss_pred CeecCCCCchHHHHHHHHhhhhhhhhhhhhhccccCCCCccchhhhhcccCCCCccccccCCCCcCcchhcccCCCCCCC
Q 006493 440 GTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPN 519 (643)
Q Consensus 440 ~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 519 (643)
...-+.. . +-
T Consensus 504 ~~~~~~~-~---------------------------------------------------------------------~~ 513 (1160)
T KOG0209|consen 504 SADEGAL-T---------------------------------------------------------------------PA 513 (1160)
T ss_pred cCCcccc-c---------------------------------------------------------------------ch
Confidence 1110000 0 00
Q ss_pred hhhHHHHHHHHhhcccccccccCCCCceeEecCChhHHHHHHHHHHcCcEEEEecCCeEEEEecCCCCCCcceeEEEEEE
Q 006493 520 VDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILN 599 (643)
Q Consensus 520 ~~~~~~~~~~lalch~~~~~~~~~~~~~~y~~gsp~E~All~~a~~~g~~~~~r~~~~~~~~~~~~~~g~~~~~~~~il~ 599 (643)
++.-.+-..++|.||+.....++ ..|||.|.|.+++ .||.++..+. +.. ..|+ -...+|.+
T Consensus 514 s~~p~~t~~vlAscHsLv~le~~-------lVGDPlEKA~l~~---v~W~~~k~~~--v~p-----~~~~--~~~lkI~~ 574 (1160)
T KOG0209|consen 514 SKAPNETVLVLASCHSLVLLEDK-------LVGDPLEKATLEA---VGWNLEKKNS--VCP-----REGN--GKKLKIIQ 574 (1160)
T ss_pred hhCCchHHHHHHHHHHHHHhcCc-------ccCChHHHHHHHh---cCcccccCcc--cCC-----CcCC--Ccccchhh
Confidence 00112346789999998765322 3699999999988 8888765321 111 1122 24688999
Q ss_pred eecCCCCCceEEEEEEcCC----CeEEEEEeccchhhhhhhhc
Q 006493 600 LLDFTSKRKRMSVIVRDED----GQILLLCKGADRLASPLLFN 638 (643)
Q Consensus 600 ~~~F~S~rKrMSViv~~~~----g~~~l~~KGA~e~Il~~c~~ 638 (643)
++.|+|..||||||+.... -++++.+|||||+|-.++..
T Consensus 575 ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml~d 617 (1160)
T KOG0209|consen 575 RYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEMLRD 617 (1160)
T ss_pred hhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHHHHh
Confidence 9999999999999998752 47999999999999998864
No 22
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=8e-44 Score=398.25 Aligned_cols=358 Identities=17% Similarity=0.111 Sum_probs=262.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhcc-CCC------CCchhhh---HHHHHHHHHHHHHHHHHHHHHhhhhhhhcc---e-EEE
Q 006493 75 FEQFNRVANIYFLIAALLSVTP-LSP------FSPVSML---LPLAIVVGVSMAKEALEDWRRFMQDKEVNA---R-KVS 140 (643)
Q Consensus 75 ~~~f~~~~~~~~l~~~il~~~~-~~~------~~~~~~~---~~l~~vl~i~~i~~~~~~~~~~k~~~~~n~---~-~~~ 140 (643)
..||++++.+.++++++++++. +.+ ..+...+ +.+++.+++..+.+.+.+++.+++.+.+.+ . +++
T Consensus 28 ~~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~ 107 (679)
T PRK01122 28 RVQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFAR 107 (679)
T ss_pred HHHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEE
Confidence 3588999999999999999875 111 1222222 223333444455566777777766555543 3 699
Q ss_pred EEeCCCe-EEEeeeeccccCcEEEeccCcccCccEEEEeecCCCCeEEEEccCCCCccceeeecccccCCCCCchhhhcc
Q 006493 141 VHVGNGV-FSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKE 219 (643)
Q Consensus 141 V~~r~g~-~~~i~~~~LvvGDIV~l~~ge~iPaD~ill~~s~~~g~~~Vdes~LtGEs~p~~K~~~~~~~~~~~~~~~~~ 219 (643)
|+ |+|+ +++|++++|++||+|.|++||.|||||+++++. +.||||+|||||.|+.|.+++..
T Consensus 108 vi-r~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG~-----a~VDESaLTGES~PV~K~~G~~~----------- 170 (679)
T PRK01122 108 KL-REPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGV-----ASVDESAITGESAPVIRESGGDF----------- 170 (679)
T ss_pred EE-ECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEcc-----EEEEcccccCCCCceEeCCCCcc-----------
Confidence 99 7877 899999999999999999999999999999954 89999999999999999987541
Q ss_pred cceEEEeeCCCCCceEEEEEEEECCeeeccCCCCeEEeceeeecCCeEEEEEEEeccccceec---ccCCCCCccChHHH
Q 006493 220 FTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQ---NATTSPSKRSGIEK 296 (643)
Q Consensus 220 ~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~ni~~rgs~l~~t~~~~gvVv~tG~~Tk~~~---~~~~~~~k~s~l~~ 296 (643)
...|+||.+++|. +.+.|+++|.+|.+++ .......+++|+|.
T Consensus 171 -------------~~V~aGT~v~~G~---------------------~~i~Vta~g~~S~lgki~~lve~a~~~ktp~e~ 216 (679)
T PRK01122 171 -------------SSVTGGTRVLSDW---------------------IVIRITANPGESFLDRMIALVEGAKRQKTPNEI 216 (679)
T ss_pred -------------CeEEeceEEEeee---------------------EEEEEEEecccCHHHHHHHHHHhccccCCHHHH
Confidence 1359999999988 9999999999996655 44556667899998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhheeccCCCCccccCCCCCccccCCCCCchhHHHHHHHHHHHHhccccchhHHHHH
Q 006493 297 KMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIE 376 (643)
Q Consensus 297 ~~~~~~~~~~~~~l~~~~i~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~l~ 376 (643)
.++.+...++++.++++++.+.+. ||.+. ...+...+.+++.+||++|+..++
T Consensus 217 al~~l~~~l~~i~l~~~~~~~~~~-----------~~~g~----------------~~~l~~~iallV~aiP~alg~l~~ 269 (679)
T PRK01122 217 ALTILLAGLTIIFLLVVATLPPFA-----------AYSGG----------------ALSITVLVALLVCLIPTTIGGLLS 269 (679)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHH-----------HHhCc----------------hHHHHHHHHHHHHcccchhhhHHH
Confidence 888876666544433332222211 11100 025666788899999999998888
Q ss_pred HHHHHHHHHHhcccccccccCCCCceeccCcchhhcccccEEEEcCCCccccCceEEEEEEEcCeecCCCCchHHHHHHH
Q 006493 377 IVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAK 456 (643)
Q Consensus 377 ~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~y~~~~~~~~~~~~~ 456 (643)
.+...++.++ .++++++|+..++|.||+++++|||||||||+|+|.+.+++..+. .+
T Consensus 270 ~i~i~g~~r~----------ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~-----~~-------- 326 (679)
T PRK01122 270 AIGIAGMDRV----------LQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPG-----VT-------- 326 (679)
T ss_pred HHHHHHHHHH----------hcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCC-----CC--------
Confidence 8877788888 889999999999999999999999999999999999988752110 00
Q ss_pred HhhhhhhhhhhhhhccccCCCCccchhhhhcccCCCCccccccCCCCcCcchhcccCCCCCCChhhHHHHHHHHhhcccc
Q 006493 457 QMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTA 536 (643)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~lalch~~ 536 (643)
.++++.+.++|...
T Consensus 327 ------------------------------------------------------------------~~~ll~~a~~~s~~ 340 (679)
T PRK01122 327 ------------------------------------------------------------------EEELADAAQLSSLA 340 (679)
T ss_pred ------------------------------------------------------------------HHHHHHHHHHhcCC
Confidence 12345555666433
Q ss_pred cccccCCCCceeEecCChhHHHHHHHHHH-cCcEEEEecCCeEEEEecCCCCCCcceeEEEEEEeecCCCCCceEEEEEE
Q 006493 537 IPELNEETGNLTYEAESPDEAAFLVAARE-FGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVR 615 (643)
Q Consensus 537 ~~~~~~~~~~~~y~~gsp~E~All~~a~~-~g~~~~~r~~~~~~~~~~~~~~g~~~~~~~~il~~~~F~S~rKrMSViv~ 615 (643)
. ..|...|++++|++ .|+... +..++..+.+||++.+|+|++.+.
T Consensus 341 s--------------~hP~~~AIv~~a~~~~~~~~~--------------------~~~~~~~~~~pF~s~~~~~gv~~~ 386 (679)
T PRK01122 341 D--------------ETPEGRSIVVLAKQRFNLRER--------------------DLQSLHATFVPFSAQTRMSGVDLD 386 (679)
T ss_pred C--------------CCchHHHHHHHHHhhcCCCch--------------------hhccccceeEeecCcCceEEEEEC
Confidence 1 24778999999886 343210 122456678899999998888652
Q ss_pred cCCCeEEEEEeccchhhhhhhhc
Q 006493 616 DEDGQILLLCKGADRLASPLLFN 638 (643)
Q Consensus 616 ~~~g~~~l~~KGA~e~Il~~c~~ 638 (643)
| ..|+|||+|.|+++|..
T Consensus 387 ---g--~~~~kGa~e~il~~~~~ 404 (679)
T PRK01122 387 ---G--REIRKGAVDAIRRYVES 404 (679)
T ss_pred ---C--EEEEECCHHHHHHHHHh
Confidence 4 58999999999999953
No 23
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=100.00 E-value=2.8e-43 Score=392.92 Aligned_cols=359 Identities=16% Similarity=0.168 Sum_probs=260.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhcc-CCC---------CCchhhh--HHHHHHHHHHHHHHHHHHHHHhhhhhhhcc---e-E
Q 006493 75 FEQFNRVANIYFLIAALLSVTP-LSP---------FSPVSML--LPLAIVVGVSMAKEALEDWRRFMQDKEVNA---R-K 138 (643)
Q Consensus 75 ~~~f~~~~~~~~l~~~il~~~~-~~~---------~~~~~~~--~~l~~vl~i~~i~~~~~~~~~~k~~~~~n~---~-~ 138 (643)
..||+++..+.++++++++++. +.+ ..|+... +.+++.+++..+.+.+.+++.+++.+.+.+ . .
T Consensus 27 ~~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~ 106 (675)
T TIGR01497 27 KAQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTF 106 (675)
T ss_pred HHHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCce
Confidence 3578999999999999988774 211 1255433 223333455556677778777777766654 3 4
Q ss_pred EEEEeCCCeEEEeeeeccccCcEEEeccCcccCccEEEEeecCCCCeEEEEccCCCCccceeeecccccCCCCCchhhhc
Q 006493 139 VSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFK 218 (643)
Q Consensus 139 ~~V~~r~g~~~~i~~~~LvvGDIV~l~~ge~iPaD~ill~~s~~~g~~~Vdes~LtGEs~p~~K~~~~~~~~~~~~~~~~ 218 (643)
++|+++||++++|+.++|+|||+|.|++||.|||||++++++ +.||||+|||||.|+.|.+++..
T Consensus 107 a~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG~-----~~VDESaLTGES~PV~K~~g~~~---------- 171 (675)
T TIGR01497 107 AKLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEGV-----ASVDESAITGESAPVIKESGGDF---------- 171 (675)
T ss_pred EEEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcc-----EEEEcccccCCCCceeecCCCCc----------
Confidence 788845899999999999999999999999999999999954 89999999999999999987532
Q ss_pred ccceEEEeeCCCCCceEEEEEEEECCeeeccCCCCeEEeceeeecCCeEEEEEEEeccccceec---ccCCCCCccChHH
Q 006493 219 EFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQ---NATTSPSKRSGIE 295 (643)
Q Consensus 219 ~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~ni~~rgs~l~~t~~~~gvVv~tG~~Tk~~~---~~~~~~~k~s~l~ 295 (643)
...|+||.+.+|. +.++|+++|.+|.+++ ..+....+++|+|
T Consensus 172 --------------~~V~aGT~v~~G~---------------------~~i~Vt~~g~~S~lgri~~lve~a~~~ktplq 216 (675)
T TIGR01497 172 --------------ASVTGGTRILSDW---------------------LVVECTANPGETFLDRMIALVEGAQRRKTPNE 216 (675)
T ss_pred --------------ceeecCcEEEeeE---------------------EEEEEEEecccCHHHHHHHHHHhcccCCChHH
Confidence 0258999999888 9999999999996654 4456666789999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhheeccCCCCccccCCCCCccccCCCCCchhHHHHHHHHHHHHhccccchhHHHH
Q 006493 296 KKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSI 375 (643)
Q Consensus 296 ~~~~~~~~~~~~~~l~~~~i~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~l 375 (643)
..++.+..++.++.+++++ .++.+..... + ...+...+.+++.+||++|....
T Consensus 217 ~~l~~l~~~l~~v~li~~~---~~~~~~~~~~----~--------------------~~~~~~lvallV~aiP~aLg~l~ 269 (675)
T TIGR01497 217 IALTILLIALTLVFLLVTA---TLWPFAAYGG----N--------------------AISVTVLVALLVCLIPTTIGGLL 269 (675)
T ss_pred HHHHHHHHHHHHHHHHHHH---HHHHHHHhcC----h--------------------hHHHHHHHHHHHHhCchhhhhHH
Confidence 8888776555433332221 1111100000 0 12345567889999999877666
Q ss_pred HHHHHHHHHHHhcccccccccCCCCceeccCcchhhcccccEEEEcCCCccccCceEEEEEEEcCeecCCCCchHHHHHH
Q 006493 376 EIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAA 455 (643)
Q Consensus 376 ~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~y~~~~~~~~~~~~ 455 (643)
+.+...++.++ .++++++|+..++|.||+++++|||||||||+|+|++.+++..+. .+
T Consensus 270 ~av~iag~~r~----------ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~-----~~------- 327 (675)
T TIGR01497 270 SAIGIAGMDRV----------LGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQG-----VD------- 327 (675)
T ss_pred HHHHHHHHHHH----------HHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEecCC-----Cc-------
Confidence 66656667777 789999999999999999999999999999999999998763110 00
Q ss_pred HHhhhhhhhhhhhhhccccCCCCccchhhhhcccCCCCccccccCCCCcCcchhcccCCCCCCChhhHHHHHHHHhhccc
Q 006493 456 KQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHT 535 (643)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~lalch~ 535 (643)
.++++...++|..
T Consensus 328 -------------------------------------------------------------------~~~ll~~aa~~~~ 340 (675)
T TIGR01497 328 -------------------------------------------------------------------EKTLADAAQLASL 340 (675)
T ss_pred -------------------------------------------------------------------HHHHHHHHHHhcC
Confidence 1234555666643
Q ss_pred ccccccCCCCceeEecCChhHHHHHHHHHHcCcEEEEecCCeEEEEecCCCCCCcceeEEEEEEeecCCCCCceEEEEEE
Q 006493 536 AIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVR 615 (643)
Q Consensus 536 ~~~~~~~~~~~~~y~~gsp~E~All~~a~~~g~~~~~r~~~~~~~~~~~~~~g~~~~~~~~il~~~~F~S~rKrMSViv~ 615 (643)
. ...|.+.|++++|++.|..... ..++..+..||++.+|+|++.+.
T Consensus 341 ~--------------s~hP~a~Aiv~~a~~~~~~~~~--------------------~~~~~~~~~pf~~~~~~sg~~~~ 386 (675)
T TIGR01497 341 A--------------DDTPEGKSIVILAKQLGIREDD--------------------VQSLHATFVEFTAQTRMSGINLD 386 (675)
T ss_pred C--------------CCCcHHHHHHHHHHHcCCCccc--------------------cccccceEEEEcCCCcEEEEEEe
Confidence 2 1368999999999987754311 12345667899999888777554
Q ss_pred cCCCeEEEEEeccchhhhhhhh
Q 006493 616 DEDGQILLLCKGADRLASPLLF 637 (643)
Q Consensus 616 ~~~g~~~l~~KGA~e~Il~~c~ 637 (643)
+| ..++|||+|.|+++|.
T Consensus 387 --~g--~~~~kGa~e~i~~~~~ 404 (675)
T TIGR01497 387 --NG--RMIRKGAVDAIKRHVE 404 (675)
T ss_pred --CC--eEEEECCHHHHHHHHH
Confidence 35 4799999999998884
No 24
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=8.1e-43 Score=389.83 Aligned_cols=353 Identities=15% Similarity=0.126 Sum_probs=246.9
Q ss_pred HHHHHHHHHHHHHHHHHhhcc--CCC----CCc--hhhhHHHHHHHHHHHHHH-HHH---HHHHhhhhhhhcc---e-EE
Q 006493 76 EQFNRVANIYFLIAALLSVTP--LSP----FSP--VSMLLPLAIVVGVSMAKE-ALE---DWRRFMQDKEVNA---R-KV 139 (643)
Q Consensus 76 ~~f~~~~~~~~l~~~il~~~~--~~~----~~~--~~~~~~l~~vl~i~~i~~-~~~---~~~~~k~~~~~n~---~-~~ 139 (643)
.+|++|..+.++++++++++. +.. ..| +..+.++ ++++++.+.. +.| +++.+++.+.+.+ . ++
T Consensus 28 ~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~-~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a 106 (673)
T PRK14010 28 YMIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIF-IILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKA 106 (673)
T ss_pred HHHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceE
Confidence 467889989999999998865 211 111 2233333 3333333333 333 5555555544443 3 57
Q ss_pred E-EEeCCCeEEEeeeeccccCcEEEeccCcccCccEEEEeecCCCCeEEEEccCCCCccceeeecccccCCCCCchhhhc
Q 006493 140 S-VHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFK 218 (643)
Q Consensus 140 ~-V~~r~g~~~~i~~~~LvvGDIV~l~~ge~iPaD~ill~~s~~~g~~~Vdes~LtGEs~p~~K~~~~~~~~~~~~~~~~ 218 (643)
+ |. |||++++|++++|+|||+|.|++||.|||||++++++ +.||||+|||||.|+.|.++...
T Consensus 107 ~~v~-rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG~-----~~VDESaLTGES~PV~K~~g~d~---------- 170 (673)
T PRK14010 107 RRIK-QDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKGL-----ATVDESAITGESAPVIKESGGDF---------- 170 (673)
T ss_pred EEEE-eCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEEcc-----eEEecchhcCCCCceeccCCCcc----------
Confidence 6 56 8999999999999999999999999999999999954 89999999999999999987211
Q ss_pred ccceEEEeeCCCCCceEEEEEEEECCeeeccCCCCeEEeceeeecCCeEEEEEEEeccccceec---ccCCCCCccChHH
Q 006493 219 EFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQ---NATTSPSKRSGIE 295 (643)
Q Consensus 219 ~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~ni~~rgs~l~~t~~~~gvVv~tG~~Tk~~~---~~~~~~~k~s~l~ 295 (643)
...|+||.+.+|. +.++|+++|.+|.+++ ..+....+++|+|
T Consensus 171 --------------~~V~aGT~v~~G~---------------------~~i~Vta~g~~T~lgki~~lve~a~~~ktp~e 215 (673)
T PRK14010 171 --------------DNVIGGTSVASDW---------------------LEVEITSEPGHSFLDKMIGLVEGATRKKTPNE 215 (673)
T ss_pred --------------CeeecCceeecce---------------------EEEEEEEecccCHHHHHHHHHhhccccCCHHH
Confidence 1259999999998 9999999999996654 4556666789999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhheeccCCCCccccCCCCCccccCCCCCchhHHHHHHHHHHHHhccccchhHHHH
Q 006493 296 KKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSI 375 (643)
Q Consensus 296 ~~~~~~~~~~~~~~l~~~~i~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~l 375 (643)
..+..+...+.++.+ +++ ++.++.. .|. .....+...+.+++.++|++|+..+
T Consensus 216 ~~l~~l~~~l~ii~l--~~~---~~~~~~~------~~~----------------~~~~~~~~~val~V~~IP~aL~~~~ 268 (673)
T PRK14010 216 IALFTLLMTLTIIFL--VVI---LTMYPLA------KFL----------------NFNLSIAMLIALAVCLIPTTIGGLL 268 (673)
T ss_pred HHHHHHHHHHhHHHH--HHH---HHHHHHH------hhc----------------cHHHHHHHHHHHHHHhhhhhHHHHH
Confidence 776665443332221 111 1111000 000 0012445566666778899999999
Q ss_pred HHHHHHHHHHHhcccccccccCCCCceeccCcchhhcccccEEEEcCCCccccCceEEEEEEEcCeecCCCCchHHHHHH
Q 006493 376 EIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAA 455 (643)
Q Consensus 376 ~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~y~~~~~~~~~~~~ 455 (643)
+++...++.++ .++++++|+..++|.||.++++|||||||||+|++.+.++...+ + .
T Consensus 269 ~~~~~~g~~r~----------ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~-----~-~------- 325 (673)
T PRK14010 269 SAIGIAGMDRV----------TQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVK-----S-S------- 325 (673)
T ss_pred HHHHHHHHHHH----------hhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCC-----C-c-------
Confidence 98888888888 89999999999999999999999999999999877766543100 0 0
Q ss_pred HHhhhhhhhhhhhhhccccCCCCccchhhhhcccCCCCccccccCCCCcCcchhcccCCCCCCChhhHHHHHHHHhhccc
Q 006493 456 KQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHT 535 (643)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~lalch~ 535 (643)
..++++...++|+.
T Consensus 326 ------------------------------------------------------------------~~~~ll~~a~~~~~ 339 (673)
T PRK14010 326 ------------------------------------------------------------------SFERLVKAAYESSI 339 (673)
T ss_pred ------------------------------------------------------------------cHHHHHHHHHHhcC
Confidence 01234555566653
Q ss_pred ccccccCCCCceeEecCChhHHHHHHHHHHcCcEEEEecCCeEEEEecCCCCCCcceeEEEEEEeecCCCCCceEEEEEE
Q 006493 536 AIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVR 615 (643)
Q Consensus 536 ~~~~~~~~~~~~~y~~gsp~E~All~~a~~~g~~~~~r~~~~~~~~~~~~~~g~~~~~~~~il~~~~F~S~rKrMSViv~ 615 (643)
. ..+|.+.|+++++++.|+.... ...+.+||++++|+|++.+.
T Consensus 340 ~--------------s~~P~~~AIv~~a~~~~~~~~~-----------------------~~~~~~pF~~~~k~~gv~~~ 382 (673)
T PRK14010 340 A--------------DDTPEGRSIVKLAYKQHIDLPQ-----------------------EVGEYIPFTAETRMSGVKFT 382 (673)
T ss_pred C--------------CCChHHHHHHHHHHHcCCCchh-----------------------hhcceeccccccceeEEEEC
Confidence 2 1389999999999887754210 01123799999999999753
Q ss_pred cCCCeEEEEEeccchhhhhhhhc
Q 006493 616 DEDGQILLLCKGADRLASPLLFN 638 (643)
Q Consensus 616 ~~~g~~~l~~KGA~e~Il~~c~~ 638 (643)
|+ .+.|||++.++++|+.
T Consensus 383 ---g~--~i~kGa~~~il~~~~~ 400 (673)
T PRK14010 383 ---TR--EVYKGAPNSMVKRVKE 400 (673)
T ss_pred ---CE--EEEECCHHHHHHHhhh
Confidence 43 4569999999999974
No 25
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=100.00 E-value=1.4e-41 Score=377.62 Aligned_cols=229 Identities=32% Similarity=0.401 Sum_probs=188.9
Q ss_pred HHHHHHhhhhhhhcceEEEEEeCCCeEEEeeeeccccCcEEEeccCcccCccEEEEeecCCCCeEEEEccCCCCccceee
Q 006493 122 LEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKV 201 (643)
Q Consensus 122 ~~~~~~~k~~~~~n~~~~~V~~r~g~~~~i~~~~LvvGDIV~l~~ge~iPaD~ill~~s~~~g~~~Vdes~LtGEs~p~~ 201 (643)
.++..+...+..+++++++|+ |+| +++|++++|+|||+|.+++||.|||||+|+++ .+.||||+|||||.|+.
T Consensus 20 ~~~~~~~l~~~~~~~~~~~v~-r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g-----~~~vdes~LTGEs~pv~ 92 (499)
T TIGR01494 20 AEDAIRSLKDLLVNPETVTVL-RNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLSG-----SCFVDESNLTGESVPVL 92 (499)
T ss_pred HHHHHHHHhhccCCCCeEEEE-ECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEc-----cEEEEcccccCCCCCee
Confidence 333333333434667899999 788 99999999999999999999999999999995 49999999999999999
Q ss_pred ecccccCCCCCchhhhcccceEEEeeCCCCCceEEEEEEEECCeeeccCCCCeEEeceeeecCCeEEEEEEEecccccee
Q 006493 202 KRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVM 281 (643)
Q Consensus 202 K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~ni~~rgs~l~~t~~~~gvVv~tG~~Tk~~ 281 (643)
|.+++.. |+|+.+.+|. +.+.|..+|.+|...
T Consensus 93 k~~g~~v---------------------------~~gs~~~~G~---------------------~~~~v~~~~~~s~~~ 124 (499)
T TIGR01494 93 KTAGDAV---------------------------FAGTYVFNGT---------------------LIVVVSATGPNTFGG 124 (499)
T ss_pred eccCCcc---------------------------ccCcEEeccE---------------------EEEEEEEeccccHHH
Confidence 9987766 8999999998 888999999998543
Q ss_pred ---cccCCCCCccChHHHHHHHHH-HHHHHHHHHHHHHHHHHhhheeccCCCCccccCCCCCccccCCCCCchhHHHHHH
Q 006493 282 ---QNATTSPSKRSGIEKKMDKII-FILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLV 357 (643)
Q Consensus 282 ---~~~~~~~~k~s~l~~~~~~~~-~~~~~~~l~~~~i~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 357 (643)
.........++++++..+++. .++++++++++++.++++..+.... ..| ...+.
T Consensus 125 ~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~~--~~~--------------------~~~~~ 182 (499)
T TIGR01494 125 KIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIALAVFLFWAIGLWDP--NSI--------------------FKIFL 182 (499)
T ss_pred HHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc--ccH--------------------HHHHH
Confidence 333344454788999999998 6777777777777666554321100 012 35788
Q ss_pred HHHHHHhccccchhHHHHHHHHHHHHHHHhcccccccccCCCCceeccCcchhhcccccEEEEcCCCccccCceEEEEEE
Q 006493 358 TALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCS 437 (643)
Q Consensus 358 ~~i~ll~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTLT~n~m~v~~~~ 437 (643)
.++.+++.++|++|+++++++...+..++ .++++++|+++.+|+||+++++|||||||||+|+|+|.+++
T Consensus 183 ~~~~vl~~~~P~aL~~~~~~~~~~~~~~~----------~~~gilvk~~~~lE~l~~v~~i~fDKTGTLT~~~~~v~~~~ 252 (499)
T TIGR01494 183 RALILLVIAIPIALPLAVTIALAVGDARL----------AKKGIVVRSLNALEELGKVDYICSDKTGTLTKNEMSFKKVS 252 (499)
T ss_pred HHHHHHHHhcCCcHHHHHHHHHHHHHHHH----------HHCCcEEechhhhhhccCCcEEEeeCCCccccCceEEEEEE
Confidence 99999999999999999999999998887 77899999999999999999999999999999999999875
No 26
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=100.00 E-value=1.8e-38 Score=356.29 Aligned_cols=231 Identities=23% Similarity=0.251 Sum_probs=195.6
Q ss_pred HHHHHHHHHHHhhhhh---hh---cceEEEEEeCCC-eEEEeeeeccccCcEEEeccCcccCccEEEEeecCCCCeEEEE
Q 006493 117 MAKEALEDWRRFMQDK---EV---NARKVSVHVGNG-VFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVE 189 (643)
Q Consensus 117 ~i~~~~~~~~~~k~~~---~~---n~~~~~V~~r~g-~~~~i~~~~LvvGDIV~l~~ge~iPaD~ill~~s~~~g~~~Vd 189 (643)
.+..+++.+.++|+.+ .+ ++..++|+ |+| +++++++++|+|||+|.|++||.|||||+|++++ +.||
T Consensus 29 ~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~-r~~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~vi~g~-----~~vd 102 (556)
T TIGR01525 29 LLGETLEERAKGRASDALSALLALAPSTARVL-QGDGSEEEVPVEELQVGDIVIVRPGERIPVDGVVISGE-----SEVD 102 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEE-ECCCeEEEEEHHHCCCCCEEEECCCCEeccceEEEecc-----eEEe
Confidence 3344455555444443 32 34679999 775 9999999999999999999999999999999954 8999
Q ss_pred ccCCCCccceeeecccccCCCCCchhhhcccceEEEeeCCCCCceEEEEEEEECCeeeccCCCCeEEeceeeecCCeEEE
Q 006493 190 TMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYG 269 (643)
Q Consensus 190 es~LtGEs~p~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~ni~~rgs~l~~t~~~~g 269 (643)
||+||||+.|+.|.+++.. |+||.+.+|+ +.+
T Consensus 103 es~lTGEs~pv~k~~g~~v---------------------------~aGt~v~~g~---------------------~~~ 134 (556)
T TIGR01525 103 ESALTGESMPVEKKEGDEV---------------------------FAGTINGDGS---------------------LTI 134 (556)
T ss_pred ehhccCCCCCEecCCcCEE---------------------------eeceEECCce---------------------EEE
Confidence 9999999999999987654 9999999998 999
Q ss_pred EEEEeccccceeccc---CCCCCccChHHHHHHHHHHHHHHHHHHHHHHHHHHhhheeccCCCCccccCCCCCccccCCC
Q 006493 270 SVIFTGHDSKVMQNA---TTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPG 346 (643)
Q Consensus 270 vVv~tG~~Tk~~~~~---~~~~~k~s~l~~~~~~~~~~~~~~~l~~~~i~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 346 (643)
+|++||.+|++++.. .....+++++++.+++++.++.++.++++++.++++++... +
T Consensus 135 ~v~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~~~------~-------------- 194 (556)
T TIGR01525 135 RVTKLGEDSTLAQIVKLVEEAQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLALGA------L-------------- 194 (556)
T ss_pred EEEEecccCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc------c--------------
Confidence 999999999776543 34456689999999999999999888888888877543211 0
Q ss_pred CCchhHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccccccccCCCCceeccCcchhhcccccEEEEcCCCcc
Q 006493 347 KPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTL 426 (643)
Q Consensus 347 ~~~~~~~~~~~~~i~ll~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTL 426 (643)
..+..++.+++..+|++|+++++++......++ .++++++|+++++|.||+++++||||||||
T Consensus 195 -------~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~----------~~~gilvk~~~~le~l~~v~~i~fDKTGTL 257 (556)
T TIGR01525 195 -------GALYRALAVLVVACPCALGLATPVAILVAIGVA----------ARRGILIKGGDALEKLAKVKTVVFDKTGTL 257 (556)
T ss_pred -------hHHHHHHHHHhhccccchhehhHHHHHHHHHHH----------HHCCceecCchHHHHhhcCCEEEEeCCCCC
Confidence 366788899999999999999999999988888 789999999999999999999999999999
Q ss_pred ccCceEEEEEEE
Q 006493 427 TCNQMDFLKCSV 438 (643)
Q Consensus 427 T~n~m~v~~~~i 438 (643)
|+|+|++.++..
T Consensus 258 T~~~~~v~~~~~ 269 (556)
T TIGR01525 258 TTGKPTVVDVEP 269 (556)
T ss_pred cCCceEEEEEEe
Confidence 999999998764
No 27
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=100.00 E-value=7.4e-38 Score=350.38 Aligned_cols=232 Identities=19% Similarity=0.210 Sum_probs=198.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhh------hcceEEEEEeCCCeEEEeeeeccccCcEEEeccCcccCccEEEEeecCCCC
Q 006493 111 IVVGVSMAKEALEDWRRFMQDKE------VNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDG 184 (643)
Q Consensus 111 ~vl~i~~i~~~~~~~~~~k~~~~------~n~~~~~V~~r~g~~~~i~~~~LvvGDIV~l~~ge~iPaD~ill~~s~~~g 184 (643)
+++++..+.+++|++.++|+.+. +.+.+++|++++|.+++|+.++|+|||+|.|++||.|||||+|++++
T Consensus 59 ~i~~~~~~g~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~g~---- 134 (562)
T TIGR01511 59 MLITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIEGE---- 134 (562)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEECc----
Confidence 34444455667777766665433 23468888855678899999999999999999999999999999954
Q ss_pred eEEEEccCCCCccceeeecccccCCCCCchhhhcccceEEEeeCCCCCceEEEEEEEECCeeeccCCCCeEEeceeeecC
Q 006493 185 ICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNT 264 (643)
Q Consensus 185 ~~~Vdes~LtGEs~p~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~ni~~rgs~l~~t 264 (643)
+.||||+||||+.|+.|.+++.+ |+||.+.+|.
T Consensus 135 -~~vdes~lTGEs~pv~k~~gd~V---------------------------~aGt~~~~g~------------------- 167 (562)
T TIGR01511 135 -SEVDESLVTGESLPVPKKVGDPV---------------------------IAGTVNGTGS------------------- 167 (562)
T ss_pred -eEEehHhhcCCCCcEEcCCCCEE---------------------------EeeeEECCce-------------------
Confidence 89999999999999999998765 9999999999
Q ss_pred CeEEEEEEEeccccceec---ccCCCCCccChHHHHHHHHHHHHHHHHHHHHHHHHHHhhheeccCCCCccccCCCCCcc
Q 006493 265 AHVYGSVIFTGHDSKVMQ---NATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDV 341 (643)
Q Consensus 265 ~~~~gvVv~tG~~Tk~~~---~~~~~~~k~s~l~~~~~~~~~~~~~~~l~~~~i~~i~~~~~~~~~~~~~~~l~~~~~~~ 341 (643)
+.+.|+++|.+|.+++ .......+++++++..++++.++.+++++++++.+++|.
T Consensus 168 --~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~~v~~~a~~~~~~~~-------------------- 225 (562)
T TIGR01511 168 --LVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVIWL-------------------- 225 (562)
T ss_pred --EEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------------
Confidence 9999999999996655 344566678999999999999999888888877766532
Q ss_pred ccCCCCCchhHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccccccccCCCCceeccCcchhhcccccEEEEc
Q 006493 342 YFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSD 421 (643)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~D 421 (643)
..+..++.+++.+|||+|+++++++......++ +++++++|++..+|.|+++++||||
T Consensus 226 ------------~~~~~~~svlvvacPcaL~la~p~a~~~~~~~a----------a~~gIlik~~~~lE~l~~v~~i~fD 283 (562)
T TIGR01511 226 ------------FALEFAVTVLIIACPCALGLATPTVIAVATGLA----------AKNGVLIKDGDALERAANIDTVVFD 283 (562)
T ss_pred ------------HHHHHHHHHHHHhccchhhhHHHHHHHHHHHHH----------HHCCeEEcChHHHHHhhCCCEEEEC
Confidence 256678999999999999999999999988888 7899999999999999999999999
Q ss_pred CCCccccCceEEEEEE
Q 006493 422 KTGTLTCNQMDFLKCS 437 (643)
Q Consensus 422 KTGTLT~n~m~v~~~~ 437 (643)
||||||+|+|++.++.
T Consensus 284 KTGTLT~g~~~v~~i~ 299 (562)
T TIGR01511 284 KTGTLTQGKPTVTDVH 299 (562)
T ss_pred CCCCCcCCCEEEEEEe
Confidence 9999999999999875
No 28
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=100.00 E-value=3.1e-37 Score=354.66 Aligned_cols=239 Identities=21% Similarity=0.196 Sum_probs=202.6
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhh------cceEEEEEeCCCeEEEeeeeccccCcEEEeccCcccCccEEEEeecCCCC
Q 006493 111 IVVGVSMAKEALEDWRRFMQDKEV------NARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDG 184 (643)
Q Consensus 111 ~vl~i~~i~~~~~~~~~~k~~~~~------n~~~~~V~~r~g~~~~i~~~~LvvGDIV~l~~ge~iPaD~ill~~s~~~g 184 (643)
+++++..+.++++.+.+.|+.+.+ .+.+++|+ |+|++++|++++|+|||+|.|++||.|||||+|++++
T Consensus 211 ~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vi-r~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~g~---- 285 (741)
T PRK11033 211 MVLLLFLIGERLEGYAASRARRGVSALMALVPETATRL-RDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSPF---- 285 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEE-ECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEECc----
Confidence 445566677778877777765433 35789999 8999999999999999999999999999999999954
Q ss_pred eEEEEccCCCCccceeeecccccCCCCCchhhhcccceEEEeeCCCCCceEEEEEEEECCeeeccCCCCeEEeceeeecC
Q 006493 185 ICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNT 264 (643)
Q Consensus 185 ~~~Vdes~LtGEs~p~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~ni~~rgs~l~~t 264 (643)
+.||||+|||||.|+.|.+++.+ |+||++.+|.
T Consensus 286 -~~vdes~lTGEs~Pv~k~~Gd~V---------------------------~aGt~~~~G~------------------- 318 (741)
T PRK11033 286 -ASFDESALTGESIPVERATGEKV---------------------------PAGATSVDRL------------------- 318 (741)
T ss_pred -EEeecccccCCCCCEecCCCCee---------------------------ccCCEEcCce-------------------
Confidence 89999999999999999998766 9999999998
Q ss_pred CeEEEEEEEeccccceec---ccCCCCCccChHHHHHHHHHHHHHHHHHHHHHHHHHHhhheeccCCCCccccCCCCCcc
Q 006493 265 AHVYGSVIFTGHDSKVMQ---NATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDV 341 (643)
Q Consensus 265 ~~~~gvVv~tG~~Tk~~~---~~~~~~~k~s~l~~~~~~~~~~~~~~~l~~~~i~~i~~~~~~~~~~~~~~~l~~~~~~~ 341 (643)
+.+.|+.+|.+|.+.+ .......+++++|+.+++++.++.+++++++++.+++|.++.. .+|.
T Consensus 319 --~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~v~~~a~~~~~~~~~~~~----~~~~-------- 384 (741)
T PRK11033 319 --VTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPAIMLVALLVILVPPLLFA----APWQ-------- 384 (741)
T ss_pred --EEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc----CCHH--------
Confidence 9999999999996544 4456667789999999999999999999999988887633221 1121
Q ss_pred ccCCCCCchhHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccccccccCCCCceeccCcchhhcccccEEEEc
Q 006493 342 YFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSD 421 (643)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~D 421 (643)
..+..++.+++.+|||+|.++.+++........ +++++++|+..++|.|+++++||||
T Consensus 385 ------------~~i~~a~svlviacPcaL~latP~a~~~~l~~a----------ar~gilik~~~alE~l~~v~~v~fD 442 (741)
T PRK11033 385 ------------EWIYRGLTLLLIGCPCALVISTPAAITSGLAAA----------ARRGALIKGGAALEQLGRVTTVAFD 442 (741)
T ss_pred ------------HHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHH----------HHCCeEEcCcHHHHHhhCCCEEEEe
Confidence 256678899999999999888888777766666 7889999999999999999999999
Q ss_pred CCCccccCceEEEEEE
Q 006493 422 KTGTLTCNQMDFLKCS 437 (643)
Q Consensus 422 KTGTLT~n~m~v~~~~ 437 (643)
||||||+|+|+|.++.
T Consensus 443 KTGTLT~g~~~v~~~~ 458 (741)
T PRK11033 443 KTGTLTEGKPQVTDIH 458 (741)
T ss_pred CCCCCcCCceEEEEEE
Confidence 9999999999999875
No 29
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=100.00 E-value=1.1e-37 Score=347.74 Aligned_cols=246 Identities=20% Similarity=0.215 Sum_probs=202.4
Q ss_pred CchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhh---hcceEEEEEeCCCeEEEeeeeccccCcEEEeccCcccCccEEEE
Q 006493 101 SPVSMLLPLAIVVGVSMAKEALEDWRRFMQDKE---VNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFL 177 (643)
Q Consensus 101 ~~~~~~~~l~~vl~i~~i~~~~~~~~~~k~~~~---~n~~~~~V~~r~g~~~~i~~~~LvvGDIV~l~~ge~iPaD~ill 177 (643)
.|++... +++++++....+.+++++..+..+. +++.+++|+ |+|+++++++++|+|||+|.|++||.|||||+++
T Consensus 17 ~~~~~~~-i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~-r~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~ii 94 (536)
T TIGR01512 17 EYLEGAL-LLLLFSIGETLEEYASGRARRALKALMELAPDTARVL-RGGSLEEVAVEELKVGDVVVVKPGERVPVDGVVL 94 (536)
T ss_pred hHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEE-ECCEEEEEEHHHCCCCCEEEEcCCCEeecceEEE
Confidence 4555543 3334444444444444444444433 345789999 8999999999999999999999999999999999
Q ss_pred eecCCCCeEEEEccCCCCccceeeecccccCCCCCchhhhcccceEEEeeCCCCCceEEEEEEEECCeeeccCCCCeEEe
Q 006493 178 SSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLR 257 (643)
Q Consensus 178 ~~s~~~g~~~Vdes~LtGEs~p~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~ni~~r 257 (643)
+++ +.||||+||||+.|+.|.+++.. |+||.+.+|.
T Consensus 95 ~g~-----~~vdes~lTGEs~pv~k~~g~~v---------------------------~aGt~v~~G~------------ 130 (536)
T TIGR01512 95 SGT-----STVDESALTGESVPVEKAPGDEV---------------------------FAGAINLDGV------------ 130 (536)
T ss_pred eCc-----EEEEecccCCCCCcEEeCCCCEE---------------------------EeeeEECCce------------
Confidence 954 89999999999999999987654 9999999998
Q ss_pred ceeeecCCeEEEEEEEeccccceeccc---CCCCCccChHHHHHHHHHHHHHHHHHHHHHHHHHHhhheeccCCCCcccc
Q 006493 258 DSKLRNTAHVYGSVIFTGHDSKVMQNA---TTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYL 334 (643)
Q Consensus 258 gs~l~~t~~~~gvVv~tG~~Tk~~~~~---~~~~~k~s~l~~~~~~~~~~~~~~~l~~~~i~~i~~~~~~~~~~~~~~~l 334 (643)
+.++|++||.+|.+++.. .....+++++++.+++++.++.+++++++++.++++++... |
T Consensus 131 ---------~~~~V~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~-- 193 (536)
T TIGR01512 131 ---------LTIVVTKLPADSTIAKIVNLVEEAQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLLKR------W-- 193 (536)
T ss_pred ---------EEEEEEEeccccHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc------c--
Confidence 999999999999776543 34456689999999999999998888888777665443211 1
Q ss_pred CCCCCccccCCCCCchhHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccccccccCCCCceeccCcchhhccc
Q 006493 335 KPKETDVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQ 414 (643)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~ 414 (643)
...+..++.+++.+||++|+++++++......++ .++++++|+++++|.+|+
T Consensus 194 ------------------~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~----------~k~gilik~~~~le~l~~ 245 (536)
T TIGR01512 194 ------------------PFWVYRALVLLVVASPCALVISAPAAYLSAISAA----------ARHGILIKGGAALEALAK 245 (536)
T ss_pred ------------------HHHHHHHHHHHhhcCccccccchHHHHHHHHHHH----------HHCCeEEcCcHHHHhhcC
Confidence 1266678899999999999999999999988888 889999999999999999
Q ss_pred ccEEEEcCCCccccCceEEEEEE
Q 006493 415 VDTILSDKTGTLTCNQMDFLKCS 437 (643)
Q Consensus 415 v~~i~~DKTGTLT~n~m~v~~~~ 437 (643)
++++|||||||||+|+|++.++.
T Consensus 246 v~~i~fDKTGTLT~~~~~v~~~~ 268 (536)
T TIGR01512 246 IKTVAFDKTGTLTTGRPKVVDVV 268 (536)
T ss_pred CCEEEECCCCCCcCCceEEEEee
Confidence 99999999999999999999885
No 30
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.8e-36 Score=336.44 Aligned_cols=244 Identities=21% Similarity=0.257 Sum_probs=213.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhh------cceEEEEEeCCCeEEEeeeeccccCcEEEeccCcccCccEEEEeecCCC
Q 006493 110 AIVVGVSMAKEALEDWRRFMQDKEV------NARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYED 183 (643)
Q Consensus 110 ~~vl~i~~i~~~~~~~~~~k~~~~~------n~~~~~V~~r~g~~~~i~~~~LvvGDIV~l~~ge~iPaD~ill~~s~~~ 183 (643)
.+++++..+.+++|++.+.|+.+.+ .+++++++++||++++++.++|++||+|.|++||.||+||++++++
T Consensus 178 a~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~G~--- 254 (713)
T COG2217 178 AMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVSGS--- 254 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEEeCc---
Confidence 3556677788899999888875443 3578988856676899999999999999999999999999999954
Q ss_pred CeEEEEccCCCCccceeeecccccCCCCCchhhhcccceEEEeeCCCCCceEEEEEEEECCeeeccCCCCeEEeceeeec
Q 006493 184 GICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRN 263 (643)
Q Consensus 184 g~~~Vdes~LtGEs~p~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~ni~~rgs~l~~ 263 (643)
..||||+|||||.|+.|.+++.+ |+||++.+|.
T Consensus 255 --s~vDeS~iTGEs~PV~k~~Gd~V---------------------------~aGtiN~~G~------------------ 287 (713)
T COG2217 255 --SSVDESMLTGESLPVEKKPGDEV---------------------------FAGTVNLDGS------------------ 287 (713)
T ss_pred --EEeecchhhCCCCCEecCCCCEE---------------------------eeeEEECCcc------------------
Confidence 89999999999999999999887 9999999999
Q ss_pred CCeEEEEEEEeccccce---ecccCCCCCccChHHHHHHHHHHHHHHHHHHHHHHHHHHhhheeccCCCCccccCCCCCc
Q 006493 264 TAHVYGSVIFTGHDSKV---MQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETD 340 (643)
Q Consensus 264 t~~~~gvVv~tG~~Tk~---~~~~~~~~~k~s~l~~~~~~~~~~~~~~~l~~~~i~~i~~~~~~~~~~~~~~~l~~~~~~ 340 (643)
+...|+++|.+|.+ .+..++++..++++|+..+++..++.+..++++++++++|.+.... .|.
T Consensus 288 ---l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~~~~----~~~------- 353 (713)
T COG2217 288 ---LTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVPVVLVIAALTFALWPLFGGG----DWE------- 353 (713)
T ss_pred ---EEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccHHHHHHHHHHHHHHHHHhcCC----cHH-------
Confidence 99999999999955 4556678888999999999999999999999999988866544321 121
Q ss_pred cccCCCCCchhHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccccccccCCCCceeccCcchhhcccccEEEE
Q 006493 341 VYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILS 420 (643)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~ 420 (643)
..+..++.+++.+|||+|.++++++.+....+. +++++++|+...+|.++++|+++|
T Consensus 354 -------------~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~a----------A~~GILiK~g~~LE~l~~v~tvvF 410 (713)
T COG2217 354 -------------TALYRALAVLVIACPCALGLATPTAILVGIGRA----------ARRGILIKGGEALERLAKVDTVVF 410 (713)
T ss_pred -------------HHHHHHHhheeeeCccHHHhHHHHHHHHHHHHH----------HhCceEEeChHHHHhhccCCEEEE
Confidence 478899999999999999999999999998888 899999999999999999999999
Q ss_pred cCCCccccCceEEEEEEEcC
Q 006493 421 DKTGTLTCNQMDFLKCSVAG 440 (643)
Q Consensus 421 DKTGTLT~n~m~v~~~~i~~ 440 (643)
|||||||+|+|.+..+...+
T Consensus 411 DKTGTLT~G~p~v~~v~~~~ 430 (713)
T COG2217 411 DKTGTLTEGKPEVTDVVALD 430 (713)
T ss_pred eCCCCCcCCceEEEEEecCC
Confidence 99999999999999987543
No 31
>PRK10671 copA copper exporting ATPase; Provisional
Probab=100.00 E-value=1.9e-35 Score=346.24 Aligned_cols=241 Identities=18% Similarity=0.185 Sum_probs=206.3
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhh------cceEEEEEeCCCeEEEeeeeccccCcEEEeccCcccCccEEEEeecCCCC
Q 006493 111 IVVGVSMAKEALEDWRRFMQDKEV------NARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDG 184 (643)
Q Consensus 111 ~vl~i~~i~~~~~~~~~~k~~~~~------n~~~~~V~~r~g~~~~i~~~~LvvGDIV~l~~ge~iPaD~ill~~s~~~g 184 (643)
+++++..+.+++|++.+.|+.+.+ .+..++|+ |+|++++|+.++|+|||+|.|++||.|||||+|++++
T Consensus 291 ~i~~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~-~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~g~---- 365 (834)
T PRK10671 291 MIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVV-TDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQGE---- 365 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEE-eCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEEce----
Confidence 445566677888888887765543 34789999 8999999999999999999999999999999999954
Q ss_pred eEEEEccCCCCccceeeecccccCCCCCchhhhcccceEEEeeCCCCCceEEEEEEEECCeeeccCCCCeEEeceeeecC
Q 006493 185 ICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNT 264 (643)
Q Consensus 185 ~~~Vdes~LtGEs~p~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~ni~~rgs~l~~t 264 (643)
+.||||+|||||.|+.|.+++.+ |+||++.+|.
T Consensus 366 -~~vdeS~lTGEs~pv~k~~gd~V---------------------------~aGt~~~~G~------------------- 398 (834)
T PRK10671 366 -AWLDEAMLTGEPIPQQKGEGDSV---------------------------HAGTVVQDGS------------------- 398 (834)
T ss_pred -EEEeehhhcCCCCCEecCCCCEE---------------------------Eecceeccee-------------------
Confidence 89999999999999999998766 9999999998
Q ss_pred CeEEEEEEEeccccceec---ccCCCCCccChHHHHHHHHHHHHHHHHHHHHHHHHHHhhheeccCCCCccccCCCCCcc
Q 006493 265 AHVYGSVIFTGHDSKVMQ---NATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDV 341 (643)
Q Consensus 265 ~~~~gvVv~tG~~Tk~~~---~~~~~~~k~s~l~~~~~~~~~~~~~~~l~~~~i~~i~~~~~~~~~~~~~~~l~~~~~~~ 341 (643)
+.+.|+++|.+|.+.+ ...+.+..++++++..++++.++.+++++++++.+++|++... +
T Consensus 399 --~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~v~~~a~~~~~~~~~~~~------~--------- 461 (834)
T PRK10671 399 --VLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALVSAAIWYFFGP------A--------- 461 (834)
T ss_pred --EEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC------c---------
Confidence 9999999999996544 4445556689999999999999999998888888777644211 0
Q ss_pred ccCCCCCchhHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccccccccCCCCceeccCcchhhcccccEEEEc
Q 006493 342 YFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSD 421 (643)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~D 421 (643)
......+..++.+++.+|||+|+++++++...+..++ +++++++|+.+.+|.||+++++|||
T Consensus 462 --------~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~----------a~~gilvk~~~~le~l~~v~~v~fD 523 (834)
T PRK10671 462 --------PQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRA----------AEFGVLVRDADALQRASTLDTLVFD 523 (834)
T ss_pred --------hHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHH----------HHCCeEEecHHHHHhhcCCCEEEEc
Confidence 0112467788999999999999999999999988888 8899999999999999999999999
Q ss_pred CCCccccCceEEEEEEE
Q 006493 422 KTGTLTCNQMDFLKCSV 438 (643)
Q Consensus 422 KTGTLT~n~m~v~~~~i 438 (643)
||||||+|+|++.++..
T Consensus 524 KTGTLT~g~~~v~~~~~ 540 (834)
T PRK10671 524 KTGTLTEGKPQVVAVKT 540 (834)
T ss_pred CCCccccCceEEEEEEc
Confidence 99999999999998764
No 32
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.9e-33 Score=307.19 Aligned_cols=251 Identities=18% Similarity=0.178 Sum_probs=212.6
Q ss_pred HHHHHHHHHHHHHHhhhhhhh------cceEEEEEeCCCe-EEEeeeeccccCcEEEeccCcccCccEEEEeecCCCCeE
Q 006493 114 GVSMAKEALEDWRRFMQDKEV------NARKVSVHVGNGV-FSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGIC 186 (643)
Q Consensus 114 ~i~~i~~~~~~~~~~k~~~~~------n~~~~~V~~r~g~-~~~i~~~~LvvGDIV~l~~ge~iPaD~ill~~s~~~g~~ 186 (643)
.+..+..++|...+.|+...+ .+.++.++ .+|+ .++|+...|++||+|+|.+|+.||+||++++|+ +
T Consensus 349 ~fi~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii-~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv~Gs-----s 422 (951)
T KOG0207|consen 349 TFITLGRWLESLAKGKTSEALSKLMSLAPSKATII-EDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVVVDGS-----S 422 (951)
T ss_pred HHHHHHHHHHHHhhccchHHHHHHhhcCcccceEe-ecCCcceEeeeeeeccCCEEEECCCCccccccEEEeCc-----e
Confidence 355677889998888875544 35788888 7886 789999999999999999999999999999955 9
Q ss_pred EEEccCCCCccceeeecccccCCCCCchhhhcccceEEEeeCCCCCceEEEEEEEECCeeeccCCCCeEEeceeeecCCe
Q 006493 187 YVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAH 266 (643)
Q Consensus 187 ~Vdes~LtGEs~p~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~ni~~rgs~l~~t~~ 266 (643)
+||||.+|||+.|+.|++++.+ .+|+++.+|.
T Consensus 423 ~VDEs~iTGEs~PV~Kk~gs~V---------------------------iaGsiN~nG~--------------------- 454 (951)
T KOG0207|consen 423 EVDESLITGESMPVPKKKGSTV---------------------------IAGSINLNGT--------------------- 454 (951)
T ss_pred eechhhccCCceecccCCCCee---------------------------eeeeecCCce---------------------
Confidence 9999999999999999998877 8999999998
Q ss_pred EEEEEEEeccccce---ecccCCCCCccChHHHHHHHHHHHHHHHHHHHHHHHHHHhhheeccCCCCccccCCCCCcccc
Q 006493 267 VYGSVIFTGHDSKV---MQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYF 343 (643)
Q Consensus 267 ~~gvVv~tG~~Tk~---~~~~~~~~~k~s~l~~~~~~~~~~~~~~~l~~~~i~~i~~~~~~~~~~~~~~~l~~~~~~~~~ 343 (643)
.+.-++++|.||.+ .+..++++..++|+|+..|+++.++.+++++++++++++|.+..... .||.
T Consensus 455 l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~yFvP~Vi~lS~~t~~~w~~~g~~~---~~~~--------- 522 (951)
T KOG0207|consen 455 LLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYFVPVVIVLSLATFVVWILIGKIV---FKYP--------- 522 (951)
T ss_pred EEEEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhcCCchhhHHHHHHHHHHHHHcccc---ccCc---------
Confidence 88899999999954 55566788889999999999999999999999999999988766533 2321
Q ss_pred CCCCCchhHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccccccccCCCCceeccCcchhhcccccEEEEcCC
Q 006493 344 NPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKT 423 (643)
Q Consensus 344 ~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKT 423 (643)
..........|..++.+++.+|||+|.++.+.+..++...- +++++++|..+.+|.+.+|++|.||||
T Consensus 523 --~~~~~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvg----------A~nGvLIKGge~LE~~hkv~tVvFDKT 590 (951)
T KOG0207|consen 523 --RSFFDAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVG----------ATNGVLIKGGEALEKAHKVKTVVFDKT 590 (951)
T ss_pred --chhhHHHHHHHHhhheEEEEECchhhhcCCceEEEEEechh----------hhcceEEcCcHHHHHHhcCCEEEEcCC
Confidence 11112233477788999999999999999888766665444 789999999999999999999999999
Q ss_pred CccccCceEEEEEEEcCee
Q 006493 424 GTLTCNQMDFLKCSVAGTA 442 (643)
Q Consensus 424 GTLT~n~m~v~~~~i~~~~ 442 (643)
||||+|++.+.++...+..
T Consensus 591 GTLT~G~~~V~~~~~~~~~ 609 (951)
T KOG0207|consen 591 GTLTEGKPTVVDFKSLSNP 609 (951)
T ss_pred CceecceEEEEEEEecCCc
Confidence 9999999999999876654
No 33
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=99.98 E-value=2.2e-31 Score=266.67 Aligned_cols=222 Identities=26% Similarity=0.363 Sum_probs=181.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhcc---eE-EEEEeCCCeEEEeeeeccccCcEEEeccCcccCccEEEEeecCCCC
Q 006493 109 LAIVVGVSMAKEALEDWRRFMQDKEVNA---RK-VSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDG 184 (643)
Q Consensus 109 l~~vl~i~~i~~~~~~~~~~k~~~~~n~---~~-~~V~~r~g~~~~i~~~~LvvGDIV~l~~ge~iPaD~ill~~s~~~g 184 (643)
+++++++..+.+.++++++++..+++++ .+ ++|+ |||++++++|+||+|||||.|++||.+||||+|++ + |
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~-r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~-~---g 76 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVI-RDGRWQKIPSSELVPGDIIILKAGDIVPADGILLE-S---G 76 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEE-ETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEE-S---S
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEE-eccccccchHhhccceeeeecccccccccCcccee-c---c
Confidence 4566677778889999999998877654 34 8999 89999999999999999999999999999999999 1 4
Q ss_pred eEEEEccCCCCccceeeecccccCCCCCchhhhcccceEEEeeCCCCCceEEEEEEEECCeeeccCCCCeEEeceeeecC
Q 006493 185 ICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNT 264 (643)
Q Consensus 185 ~~~Vdes~LtGEs~p~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~ni~~rgs~l~~t 264 (643)
.++||||.+|||+.|+.|.+. +++..|++++||.+. +
T Consensus 77 ~~~vd~s~ltGes~pv~k~~~------------------------------------------~~~~~~~i~~Gs~v~-~ 113 (230)
T PF00122_consen 77 SAYVDESALTGESEPVKKTPL------------------------------------------PLNPGNIIFAGSIVV-S 113 (230)
T ss_dssp EEEEECHHHHSBSSEEEESSS------------------------------------------CCCTTTEE-TTEEEE-E
T ss_pred ccccccccccccccccccccc------------------------------------------cccccchhhcccccc-c
Confidence 599999999999999999863 345677888888888 7
Q ss_pred CeEEEEEEEeccccceecccC---CCCCccChHHHHHHHHHHHHHHHHHHHHHHHHHHhhheeccCCCCccccCCCCCcc
Q 006493 265 AHVYGSVIFTGHDSKVMQNAT---TSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDV 341 (643)
Q Consensus 265 ~~~~gvVv~tG~~Tk~~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~l~~~~i~~i~~~~~~~~~~~~~~~l~~~~~~~ 341 (643)
||++++|++||.+|++++... ....+++++++.++++..+++++.++++++++++++++ .....|+
T Consensus 114 g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-------- 182 (230)
T PF00122_consen 114 GWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIIIILAIAILVFIIWFFN---DSGISFF-------- 182 (230)
T ss_dssp EEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHHHHHHHHHHHHHCHTG---STTCHCC--------
T ss_pred cccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhcccccchhhhccceec---ccccccc--------
Confidence 789999999999997655443 45556799999999999999988888888777665443 1112333
Q ss_pred ccCCCCCchhHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccccccccCCCCceeccCcchhh
Q 006493 342 YFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEE 411 (643)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~ 411 (643)
..+..++.+++.++|++|+++++++...++.++ .++++++|+++++|+
T Consensus 183 ------------~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~----------~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 183 ------------KSFLFAISLLIVLIPCALPLALPLSLAIAARRL----------AKNGIIVKNLSALEA 230 (230)
T ss_dssp ------------HHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHH----------HHTTEEESSTTHHHH
T ss_pred ------------cccccccceeeeecccceeehHHHHHHHHHHHH----------HHCCEEEeCcccccC
Confidence 477888999999999999999999999999998 788999999999985
No 34
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=99.92 E-value=2e-24 Score=223.30 Aligned_cols=238 Identities=19% Similarity=0.220 Sum_probs=163.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhc----ceEEEEEeCCCeEEEeeeeccccCcEEEeccCcccCccEEEEeecCCCC
Q 006493 109 LAIVVGVSMAKEALEDWRRFMQDKEVN----ARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDG 184 (643)
Q Consensus 109 l~~vl~i~~i~~~~~~~~~~k~~~~~n----~~~~~V~~r~g~~~~i~~~~LvvGDIV~l~~ge~iPaD~ill~~s~~~g 184 (643)
|+|.+++..+-+++.|-+-+.+-..+. ...+++++.+|+++.+++.+|+.||+|.|+.||.||+||.+++ |
T Consensus 72 L~fTVlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIe-----G 146 (681)
T COG2216 72 LWFTVLFANFAEAVAEGRGKAQADSLRKTKTETIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIE-----G 146 (681)
T ss_pred HHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHhcCCCCeeeccccccccCCEEEEecCCCccCCCeEEe-----e
Confidence 334444444556655544333322222 1346666455999999999999999999999999999999999 5
Q ss_pred eEEEEccCCCCccceeeecccccCCCCCchhhhcccceEEEeeCCCCCceEEEEEEEECCeeeccCCCCeEEeceeeecC
Q 006493 185 ICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNT 264 (643)
Q Consensus 185 ~~~Vdes~LtGEs~p~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~ni~~rgs~l~~t 264 (643)
.+.||||.+||||.|+.|.++.... ..-.||.++ +
T Consensus 147 ~asVdESAITGESaPViresGgD~s------------------------sVtGgT~v~---------------------S 181 (681)
T COG2216 147 VASVDESAITGESAPVIRESGGDFS------------------------SVTGGTRVL---------------------S 181 (681)
T ss_pred eeecchhhccCCCcceeeccCCCcc------------------------cccCCcEEe---------------------e
Confidence 5999999999999999999874431 012333333 6
Q ss_pred CeEEEEEEEeccccc---eecccCCCCCccChHHHHHHHHHHHHHHHHHHHHHHHHHHhhheeccCCCCccccCCCCCcc
Q 006493 265 AHVYGSVIFTGHDSK---VMQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDV 341 (643)
Q Consensus 265 ~~~~gvVv~tG~~Tk---~~~~~~~~~~k~s~l~~~~~~~~~~~~~~~l~~~~i~~i~~~~~~~~~~~~~~~l~~~~~~~ 341 (643)
+|+...++..-.+|. +....+.+..+++|-|..++.+..-+.++.++..+. + +.+- .|...
T Consensus 182 D~l~irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~~LTliFL~~~~T--l-~p~a--------~y~~g----- 245 (681)
T COG2216 182 DWLKIRITANPGETFLDRMIALVEGAERQKTPNEIALTILLSGLTLIFLLAVAT--L-YPFA--------IYSGG----- 245 (681)
T ss_pred eeEEEEEEcCCCccHHHHHHHHhhchhccCChhHHHHHHHHHHHHHHHHHHHHh--h-hhHH--------HHcCC-----
Confidence 788888888777784 445566777888998888776655543322221111 1 1110 11000
Q ss_pred ccCCCCCchhHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccccccccCCCCceeccCcchhhcccccEEEEc
Q 006493 342 YFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSD 421 (643)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~D 421 (643)
.-..+...+.+++.++|..+.-.++..-+..+-++ .+-+++.++..+.|..|.||++..|
T Consensus 246 ----------~~~~i~~LiALlV~LIPTTIGgLLsAIGIAGMdRv----------~~~NViA~SGRAVEaaGDvdtliLD 305 (681)
T COG2216 246 ----------GAASVTVLVALLVCLIPTTIGGLLSAIGIAGMDRV----------TQFNVIATSGRAVEAAGDVDTLLLD 305 (681)
T ss_pred ----------CCcCHHHHHHHHHHHhcccHHHHHHHhhhhhhhHh----------hhhceeecCcchhhhcCCccEEEec
Confidence 00244556777888899988776666655566666 7789999999999999999999999
Q ss_pred CCCccccCceE
Q 006493 422 KTGTLTCNQMD 432 (643)
Q Consensus 422 KTGTLT~n~m~ 432 (643)
||||+|-|+=.
T Consensus 306 KTGTIT~GnR~ 316 (681)
T COG2216 306 KTGTITLGNRQ 316 (681)
T ss_pred ccCceeecchh
Confidence 99999977643
No 35
>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit
Probab=99.77 E-value=3.1e-19 Score=150.67 Aligned_cols=91 Identities=32% Similarity=0.500 Sum_probs=72.3
Q ss_pred hhcccccccccCCCCceeEecCChhHHHHHHHHHHcCcEEEEecCCeEEEEecCCCCCCcceeEEEEEEeecCCCCCceE
Q 006493 531 AICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRM 610 (643)
Q Consensus 531 alch~~~~~~~~~~~~~~y~~gsp~E~All~~a~~~g~~~~~r~~~~~~~~~~~~~~g~~~~~~~~il~~~~F~S~rKrM 610 (643)
++||++....+++.+... ..|||+|.||+.++.++|..+... ..+..+++++++||||+||||
T Consensus 1 ~LCn~a~~~~~~~~~~~~-~~G~ptE~ALl~~~~~~g~~~~~~----------------~~~~~~~~~~~~pF~S~rK~m 63 (91)
T PF13246_consen 1 ALCNDAEIEYDDESKTEE-IIGDPTEKALLRFAKKLGVGIDIK----------------EIRSKYKIVAEIPFDSERKRM 63 (91)
T ss_pred CCccccEeecCCCCcccc-ccCCcCHHHHHHHHHHcCCCCcHH----------------HHHhhcceeEEEccCccccee
Confidence 589999876554333311 469999999999999997654211 036789999999999999999
Q ss_pred EEEEEcCCCeEEEEEeccchhhhhhhhcc
Q 006493 611 SVIVRDEDGQILLLCKGADRLASPLLFNF 639 (643)
Q Consensus 611 SViv~~~~g~~~l~~KGA~e~Il~~c~~~ 639 (643)
|||++ .++.+++|+|||||.|+++|+++
T Consensus 64 svv~~-~~~~~~~~~KGA~e~il~~Ct~i 91 (91)
T PF13246_consen 64 SVVVR-NDGKYILYVKGAPEVILDRCTHI 91 (91)
T ss_pred EEEEe-CCCEEEEEcCCChHHHHHhcCCC
Confidence 99999 34468889999999999999975
No 36
>smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322.
Probab=97.43 E-value=6.1e-05 Score=58.96 Aligned_cols=47 Identities=23% Similarity=0.196 Sum_probs=40.1
Q ss_pred ccccCCCCCCCceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 006493 46 MHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVT 95 (643)
Q Consensus 46 ~~~~~~~~yg~N~i~~~k~~~~~flp~~l~~~f~~~~~~~~l~~~il~~~ 95 (643)
+.++|+++||.|+++.++.+.+. +.++++|.+++.++++++++++++
T Consensus 15 ~v~~r~~~~G~N~l~~~~~~s~~---~~~l~~~~~p~~~iL~~~a~is~~ 61 (64)
T smart00831 15 EAARRLERYGPNELPPPKKRSPL---LRFLRQFHNPLIYILLAAAVLSAL 61 (64)
T ss_pred HHHHHHHHhCCCCCCCCCCCCHH---HHHHHHHHhHHHHHHHHHHHHHHH
Confidence 45678999999999988754443 889999999999999999999876
No 37
>PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A ....
Probab=97.31 E-value=5e-05 Score=60.50 Aligned_cols=46 Identities=30% Similarity=0.367 Sum_probs=38.6
Q ss_pred CccccCCCCCCCceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHHh
Q 006493 45 HMHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLS 93 (643)
Q Consensus 45 ~~~~~~~~~yg~N~i~~~k~~~~~flp~~l~~~f~~~~~~~~l~~~il~ 93 (643)
++.++|+++||+|+++.++...+. +.++++|.+++.+++++++++|
T Consensus 24 ~ev~~r~~~~G~N~l~~~~~~s~~---~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 24 EEVEERRKKYGPNELPEPKKKSLW---RIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp HHHHHHHHHHSSSSTTTTTSSSHH---HHHHHHTTSHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcccccccccccCcHH---HHHHHHHHhHHHHHHHHHHHHC
Confidence 345678999999999777665553 8999999999999999999886
No 38
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=96.67 E-value=0.00074 Score=66.18 Aligned_cols=19 Identities=53% Similarity=0.676 Sum_probs=18.2
Q ss_pred ccEEEEcCCCccccCceEE
Q 006493 415 VDTILSDKTGTLTCNQMDF 433 (643)
Q Consensus 415 v~~i~~DKTGTLT~n~m~v 433 (643)
|++||||||||||+++|.+
T Consensus 1 i~~i~fDktGTLt~~~~~v 19 (215)
T PF00702_consen 1 IDAICFDKTGTLTQGKMSV 19 (215)
T ss_dssp ESEEEEECCTTTBESHHEE
T ss_pred CeEEEEecCCCcccCeEEE
Confidence 6899999999999999999
No 39
>KOG4383 consensus Uncharacterized conserved protein [Function unknown]
Probab=88.27 E-value=1.5 Score=48.82 Aligned_cols=37 Identities=19% Similarity=0.106 Sum_probs=34.0
Q ss_pred CCCeEEEeeeeccccCcEEEeccCcccCccEEEEeec
Q 006493 144 GNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSS 180 (643)
Q Consensus 144 r~g~~~~i~~~~LvvGDIV~l~~ge~iPaD~ill~~s 180 (643)
|||+..+++..-||.||||-+++|+..||.+.=++++
T Consensus 162 RDGhlm~lP~~LLVeGDiIa~RPGQeafan~~g~~dd 198 (1354)
T KOG4383|consen 162 RDGHLMELPRILLVEGDIIAFRPGQEAFANCEGFDDD 198 (1354)
T ss_pred ccCeeeecceeEEEeccEEEecCCccccccccccCCC
Confidence 8999999999999999999999999999998776643
No 40
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=81.03 E-value=35 Score=42.05 Aligned_cols=20 Identities=30% Similarity=0.179 Sum_probs=16.3
Q ss_pred CeEEEee--eeccccCcEEEec
Q 006493 146 GVFSYKP--WEKIQVGDIVKVE 165 (643)
Q Consensus 146 g~~~~i~--~~~LvvGDIV~l~ 165 (643)
|....+. ..+.+|.|.+.++
T Consensus 250 GDiv~l~~~~g~~iPaD~~ll~ 271 (1054)
T TIGR01657 250 GDIVSIPRPEEKTMPCDSVLLS 271 (1054)
T ss_pred CCEEEEecCCCCEecceEEEEe
Confidence 6777787 7888888988885
No 41
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=72.40 E-value=28 Score=39.70 Aligned_cols=178 Identities=12% Similarity=0.056 Sum_probs=107.8
Q ss_pred cccccchhhhHHHHHHHHHHHHHHHHHHHHHHh-hccCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhcceE-
Q 006493 61 TTKYNFFSYFPKALFEQFNRVANIYFLIAALLS-VTPLSPFSPVSMLLPLAIVVGVSMAKEALEDWRRFMQDKEVNARK- 138 (643)
Q Consensus 61 ~~k~~~~~flp~~l~~~f~~~~~~~~l~~~il~-~~~~~~~~~~~~~~~l~~vl~i~~i~~~~~~~~~~k~~~~~n~~~- 138 (643)
-..++++.+++..-|.+|.+.+++++.+..++. +-.-....++..+.+++++.++--..+-+++++|.+..+...-..
T Consensus 89 yn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~ty~~pl~fvl~itl~keavdd~~r~~rd~~~Nse~y~~l 168 (1051)
T KOG0210|consen 89 YNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGYLSTYWGPLGFVLTITLIKEAVDDLKRRRRDRELNSEKYTKL 168 (1051)
T ss_pred cceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecchhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhheee
Confidence 356888888899999999999999988887653 322122444555666777778888889999999998765544211
Q ss_pred ---------EEEEeCCCeEEEeeeeccccCcEEEeccCcccCccEEEEeecCCCCeE-------EEEccCCCCccceeee
Q 006493 139 ---------VSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGIC-------YVETMNLDGETNLKVK 202 (643)
Q Consensus 139 ---------~~V~~r~g~~~~i~~~~LvvGDIV~l~~ge~iPaD~ill~~s~~~g~~-------~Vdes~LtGEs~p~~K 202 (643)
..-+ .-|....+.-.+=+|-|.|.++.-|.- --..+.++..+|.. .--+..++-++..-.-
T Consensus 169 tr~~~~~~~Ss~i-~vGDvi~v~K~~RVPADmilLrTsd~s--g~~FiRTDQLDGETDWKLrl~vp~tQ~l~~~~el~~i 245 (1051)
T KOG0210|consen 169 TRDGTRREPSSDI-KVGDVIIVHKDERVPADMILLRTSDKS--GSCFIRTDQLDGETDWKLRLPVPRTQHLTEDSELMEI 245 (1051)
T ss_pred ccCCccccccccc-ccccEEEEecCCcCCcceEEEEccCCC--CceEEeccccCCcccceeeccchhhccCCcccchheE
Confidence 1112 336677777888899999999865532 11223333222221 0113334444433222
Q ss_pred cccccCCCCCchhhhcccceEEEeeCC------CCCceEEEEEEEECCe
Q 006493 203 RAMEATSPLNEDEAFKEFTGTVKCENP------NPSLYTFVGNIEYDRE 245 (643)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~i~~~~p------~~~~~~f~Gt~~~~g~ 245 (643)
. ........++..+-|++..... +-.+.+|++|.+-.|.
T Consensus 246 ~----v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t 290 (1051)
T KOG0210|consen 246 S----VYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGT 290 (1051)
T ss_pred E----EeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCc
Confidence 1 0001123344556777666443 2346789999998876
No 42
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=57.76 E-value=1.4e+02 Score=36.44 Aligned_cols=23 Identities=13% Similarity=-0.057 Sum_probs=20.1
Q ss_pred CCeEEEeeeeccccCcEEEeccC
Q 006493 145 NGVFSYKPWEKIQVGDIVKVEKD 167 (643)
Q Consensus 145 ~g~~~~i~~~~LvvGDIV~l~~g 167 (643)
-|....+...|.+|-|.+.++..
T Consensus 93 ~GDiv~l~~Gd~IPaD~~ll~~~ 115 (917)
T TIGR01116 93 PGDIVELAVGDKVPADIRVLSLK 115 (917)
T ss_pred CCCEEEECCCCEeeccEEEEEec
Confidence 47889999999999999998765
No 43
>PF12791 RsgI_N: Anti-sigma factor N-terminus; InterPro: IPR024449 The heat shock genes in Bacillus subtilis can be classified into several groups according to their regulation [], and the sigma gene, sigI, of Bacillus subtilis belongs to the group IV heat-shock response genes and has many orthologues in the bacterial phylum Firmicutes []. Regulation of sigma factor I is carried out by RsgI from the same operon. This entry represents the N-terminal cytoplasmic portion of RsgI ('upstream' of the single transmembrane helix) which has been shown to interact directly with Sigma-I [].
Probab=52.43 E-value=21 Score=26.71 Aligned_cols=39 Identities=13% Similarity=0.251 Sum_probs=31.2
Q ss_pred hcceEEEEEeCCCeEEEeee-eccccCcEEEeccCcccCc
Q 006493 134 VNARKVSVHVGNGVFSYKPW-EKIQVGDIVKVEKDQFFPA 172 (643)
Q Consensus 134 ~n~~~~~V~~r~g~~~~i~~-~~LvvGDIV~l~~ge~iPa 172 (643)
+.+..+.|+..+|++.+|+. .+..+||.|.+.+.+..+.
T Consensus 3 i~~~~aiVlT~dGeF~~ik~~~~~~vG~eI~~~~~~~~~~ 42 (56)
T PF12791_consen 3 IKKKYAIVLTPDGEFIKIKRKPGMEVGQEIEFDEKDIINK 42 (56)
T ss_pred CcCCEEEEEcCCCcEEEEeCCCCCcccCEEEEechhhccc
Confidence 34567888889999999875 4799999999988877653
No 44
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=48.92 E-value=1.9e+02 Score=35.61 Aligned_cols=24 Identities=8% Similarity=-0.115 Sum_probs=20.5
Q ss_pred CCCeEEEeeeeccccCcEEEeccC
Q 006493 144 GNGVFSYKPWEKIQVGDIVKVEKD 167 (643)
Q Consensus 144 r~g~~~~i~~~~LvvGDIV~l~~g 167 (643)
.-|....+...|.+|.|.+.++..
T Consensus 160 v~GDiv~l~~Gd~IPaD~~il~~~ 183 (997)
T TIGR01106 160 VVGDLVEVKGGDRIPADLRIISAQ 183 (997)
T ss_pred CCCCEEEECCCCEEeeeEEEEEcc
Confidence 347889999999999999998764
No 45
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=48.85 E-value=1.1e+02 Score=37.29 Aligned_cols=168 Identities=10% Similarity=0.039 Sum_probs=93.1
Q ss_pred CCeEEEeeeeccccCcEEEeccCcccCccEEEEeecCCCCeEEEEc-cCCCCccceeeecccccCCCCCchhhhcccceE
Q 006493 145 NGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVET-MNLDGETNLKVKRAMEATSPLNEDEAFKEFTGT 223 (643)
Q Consensus 145 ~g~~~~i~~~~LvvGDIV~l~~ge~iPaD~ill~~s~~~g~~~Vde-s~LtGEs~p~~K~~~~~~~~~~~~~~~~~~~~~ 223 (643)
-|..+.+...|.+|-|...|+..+ .=+|=-.|.|... ...-. ..++++..|..
T Consensus 160 pGDiV~l~~gd~vPAD~rLl~~~~-l~VdEs~LTGES~---pv~K~~~~~~~~~~~~~---------------------- 213 (917)
T COG0474 160 PGDIVLLEAGDVVPADLRLLESSD-LEVDESALTGESL---PVEKQALPLTKSDAPLG---------------------- 213 (917)
T ss_pred CCcEEEECCCCccccceEEEEecC-ceEEcccccCCCc---chhcccccccccccccc----------------------
Confidence 478999999999999999999876 3333333332210 00011 11111222211
Q ss_pred EEeeCCCCCceEEEEEEEECCeeeccCCCCeEEeceeeecCCeEEEEEEEeccccceeccc-CCCCCccChHHHHHHHHH
Q 006493 224 VKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNA-TTSPSKRSGIEKKMDKII 302 (643)
Q Consensus 224 i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~ni~~rgs~l~~t~~~~gvVv~tG~~Tk~~~~~-~~~~~k~s~l~~~~~~~~ 302 (643)
.+..+..|+||.+..|+.. |..+ ..|.-++-|+.++.+... .....-...+.+....+.
T Consensus 214 -----~d~~n~l~sGt~V~~G~~~----------giVv-----aTG~~T~~G~ia~~~~~~~~~~t~l~~~l~~~~~~l~ 273 (917)
T COG0474 214 -----LDRDNMLFSGTTVVSGRAK----------GIVV-----ATGFETEFGKIARLLPTKKEVKTPLQRKLNKLGKFLL 273 (917)
T ss_pred -----CCccceEEeCCEEEcceEE----------EEEE-----EEcCccHHHHHHHhhccccccCCcHHHHHHHHHHHHH
Confidence 1234478999999999822 2222 566677889888777776 333333455666666666
Q ss_pred HHHHHHHHHHHHHHHHHhhh-eeccCCCCccccCCCCCccccCCCCCchhHHHHHHHHHHHHhccccchhHHHHHHHHHH
Q 006493 303 FILFAILVLISLISSIGFAV-KINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFL 381 (643)
Q Consensus 303 ~~~~~~~l~~~~i~~i~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~l~~~~~~ 381 (643)
.+.+.+.+++.++....... |... .| ..+.-++.+.=-.+|..+.+++.+....
T Consensus 274 ~~~l~~~~~~~~~~~~~~~~~~~~~----~~---------------------~~v~l~va~IPegLp~~vti~la~g~~~ 328 (917)
T COG0474 274 VLALVLGALVFVVGLFRGGNGLLES----FL---------------------TALALAVAAVPEGLPAVVTIALALGAQR 328 (917)
T ss_pred HHHHHHHHHHHHHHHHhcCccHHHH----HH---------------------HHHHHHHhccccchHHHHHHHHHHHHHH
Confidence 65555555555554333111 1111 11 2444555556667777777666665444
Q ss_pred HH
Q 006493 382 QA 383 (643)
Q Consensus 382 ~~ 383 (643)
-+
T Consensus 329 ma 330 (917)
T COG0474 329 MA 330 (917)
T ss_pred HH
Confidence 33
No 46
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=48.37 E-value=68 Score=39.11 Aligned_cols=67 Identities=12% Similarity=0.117 Sum_probs=45.2
Q ss_pred CCchhhhHHHHHHHHHHHHHHHHHHHHHhhhh----h----hhcc-eEEEEEe---CCCeEEEeeeeccccCcEEEecc
Q 006493 100 FSPVSMLLPLAIVVGVSMAKEALEDWRRFMQD----K----EVNA-RKVSVHV---GNGVFSYKPWEKIQVGDIVKVEK 166 (643)
Q Consensus 100 ~~~~~~~~~l~~vl~i~~i~~~~~~~~~~k~~----~----~~n~-~~~~V~~---r~g~~~~i~~~~LvvGDIV~l~~ 166 (643)
.+....+++++++++++++.++.+++..++.+ . .+.+ +...|-. .-|....+...|.+|.|.+.++.
T Consensus 129 ~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g 207 (941)
T TIGR01517 129 IEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADGVFISG 207 (941)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccEEEEEc
Confidence 34555667778888899999999888655531 1 1212 2222211 34788999999999999998853
No 47
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=43.84 E-value=4.2e+02 Score=32.04 Aligned_cols=82 Identities=16% Similarity=0.141 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhcceEEEEEeCCCeEEEeeeeccccCcEEEeccCcccCccEEEEeecC---CCCe
Q 006493 109 LAIVVGVSMAKEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSY---EDGI 185 (643)
Q Consensus 109 l~~vl~i~~i~~~~~~~~~~k~~~~~n~~~~~V~~r~g~~~~i~~~~LvvGDIV~l~~ge~iPaD~ill~~s~---~~g~ 185 (643)
-..+++++.+.-+..-|..+++.+.+.+ .+ +. .++..=++.|-...|...|.+|-|++++.... +...
T Consensus 217 A~cI~iisv~Si~~sv~e~r~qs~rlr~----mv-~~----~~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa 287 (1140)
T KOG0208|consen 217 AFCIVIISVYSIVLSVYETRKQSIRLRS----MV-KF----TCPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDA 287 (1140)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHH----Hh-cC----CceEEEEECCEEEEEeccccccccEEEECCCCeEeecce
Confidence 3455566666555666666666666654 12 22 24555667788888888899999988888531 1112
Q ss_pred EEEEccCCCCccce
Q 006493 186 CYVETMNLDGETNL 199 (643)
Q Consensus 186 ~~Vdes~LtGEs~p 199 (643)
+.++-+.+.-|+.+
T Consensus 288 ~Li~g~civNEsmL 301 (1140)
T KOG0208|consen 288 LLISGDCIVNESML 301 (1140)
T ss_pred EEEeCcEEeecccc
Confidence 34444555555544
No 48
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=42.82 E-value=13 Score=35.10 Aligned_cols=14 Identities=36% Similarity=0.413 Sum_probs=12.8
Q ss_pred EEEcCCCccccCce
Q 006493 418 ILSDKTGTLTCNQM 431 (643)
Q Consensus 418 i~~DKTGTLT~n~m 431 (643)
+|||.+||||.+.+
T Consensus 1 v~fD~DGTL~~~~~ 14 (192)
T PF12710_consen 1 VIFDFDGTLTDSDS 14 (192)
T ss_dssp EEEESBTTTBSSHH
T ss_pred eEEecCcCeecCCC
Confidence 69999999999984
No 49
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=42.42 E-value=1.6e+02 Score=34.87 Aligned_cols=22 Identities=18% Similarity=-0.019 Sum_probs=18.6
Q ss_pred CCeEEEeeeeccccCcEEEecc
Q 006493 145 NGVFSYKPWEKIQVGDIVKVEK 166 (643)
Q Consensus 145 ~g~~~~i~~~~LvvGDIV~l~~ 166 (643)
-|....+...|.+|-|.+.++.
T Consensus 112 ~GDiV~l~~Gd~IPaDg~vi~g 133 (755)
T TIGR01647 112 PGDVVRLKIGDIVPADCRLFEG 133 (755)
T ss_pred CCCEEEECCCCEEeceEEEEec
Confidence 4788899999999999998863
No 50
>smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322.
Probab=39.71 E-value=72 Score=24.23 Aligned_cols=40 Identities=23% Similarity=0.243 Sum_probs=28.0
Q ss_pred eecccCCCCCccChHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006493 280 VMQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIG 319 (643)
Q Consensus 280 ~~~~~~~~~~k~s~l~~~~~~~~~~~~~~~l~~~~i~~i~ 319 (643)
.+.|.-..+.+++.+...+..+...+.+++++.+++++++
T Consensus 23 ~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~~ 62 (64)
T smart00831 23 YGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSALL 62 (64)
T ss_pred hCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 3555555555578888888888877777777777766553
No 51
>TIGR00739 yajC preprotein translocase, YajC subunit. While this protein is part of the preprotein translocase in Escherichia coli, it is not essential for viability or protein secretion. The N-terminus region contains a predicted membrane-spanning region followed by a region consisting almost entirely of residues with charged (acidic, basic, or zwitterionic) side chains. This small protein is about 100 residues in length, and is restricted to bacteria; however, this protein is absent from some lineages, including spirochetes and Mycoplasmas.
Probab=39.40 E-value=58 Score=26.83 Aligned_cols=7 Identities=43% Similarity=0.724 Sum_probs=2.7
Q ss_pred cccCcEE
Q 006493 156 IQVGDIV 162 (643)
Q Consensus 156 LvvGDIV 162 (643)
|+|||-|
T Consensus 38 L~~Gd~V 44 (84)
T TIGR00739 38 LKKGDKV 44 (84)
T ss_pred CCCCCEE
Confidence 3333333
No 52
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=37.01 E-value=1.5e+02 Score=36.08 Aligned_cols=22 Identities=9% Similarity=0.003 Sum_probs=18.8
Q ss_pred CCeEEEeeeeccccCcEEEecc
Q 006493 145 NGVFSYKPWEKIQVGDIVKVEK 166 (643)
Q Consensus 145 ~g~~~~i~~~~LvvGDIV~l~~ 166 (643)
-|....+...|.+|-|.+.++.
T Consensus 185 pGDiV~l~~Gd~IPaDg~li~g 206 (902)
T PRK10517 185 PGDIIKLAAGDMIPADLRILQA 206 (902)
T ss_pred CCCEEEECCCCEEeeeEEEEEc
Confidence 4788999999999999988863
No 53
>PF03120 DNA_ligase_OB: NAD-dependent DNA ligase OB-fold domain; InterPro: IPR004150 DNA ligases catalyse the crucial step of joining the breaks in duplex DNA during DNA replication, repair and recombination, utilizing either ATP or NAD(+) as a cofactor []. This family is a small domain found after the adenylation domain DNA_ligase_N in NAD+-dependent ligases (IPR001679 from INTERPRO). OB-fold domains generally are involved in nucleic acid binding.; GO: 0003911 DNA ligase (NAD+) activity, 0006260 DNA replication, 0006281 DNA repair; PDB: 2OWO_A 1TAE_A 3UQ8_A 1DGS_A 1V9P_B 3SGI_A.
Probab=35.11 E-value=21 Score=29.27 Aligned_cols=22 Identities=27% Similarity=0.358 Sum_probs=16.3
Q ss_pred eeeeccccCcEEEec-cCcccCc
Q 006493 151 KPWEKIQVGDIVKVE-KDQFFPA 172 (643)
Q Consensus 151 i~~~~LvvGDIV~l~-~ge~iPa 172 (643)
+.-.+|.+||.|.|. .||.||-
T Consensus 45 i~~~~i~~Gd~V~V~raGdVIP~ 67 (82)
T PF03120_consen 45 IKELDIRIGDTVLVTRAGDVIPK 67 (82)
T ss_dssp HHHTT-BBT-EEEEEEETTTEEE
T ss_pred HHHcCCCCCCEEEEEECCCccce
Confidence 345789999999885 8999994
No 54
>PRK05585 yajC preprotein translocase subunit YajC; Validated
Probab=30.57 E-value=1.1e+02 Score=26.45 Aligned_cols=11 Identities=45% Similarity=0.776 Sum_probs=4.7
Q ss_pred hhhhHHHHHHH
Q 006493 103 VSMLLPLAIVV 113 (643)
Q Consensus 103 ~~~~~~l~~vl 113 (643)
+..++|+++++
T Consensus 18 ~~~ll~lvii~ 28 (106)
T PRK05585 18 LSSLLPLVVFF 28 (106)
T ss_pred HHHHHHHHHHH
Confidence 34444444333
No 55
>PF02699 YajC: Preprotein translocase subunit; InterPro: IPR003849 Secretion across the inner membrane in some Gram-negative bacteria occurs via the preprotein translocase pathway. Proteins are produced in the cytoplasm as precursors, and require a chaperone subunit to direct them to the translocase component []. From there, the mature proteins are either targeted to the outer membrane, or remain as periplasmic proteins []. The translocase protein subunits are encoded on the bacterial chromosome. The translocase itself comprises 7 proteins, including a chaperone (SecB), ATPase (SecA), an integral membrane complex (SecY, SecE and SecG), and two additional membrane proteins that promote the release of the mature peptide into the periplasm (SecD and SecF) []. Other cytoplasmic/periplasmic proteins play a part in preprotein translocase activity, namely YidC and YajC []. The latter is bound in a complex to SecD and SecF, and plays a part in stabilising and regulating secretion through the SecYEG integral membrane component via SecA []. Homologues of the YajC gene have been found in a range of pathogenic and commensal microbes. Brucella abortis YajC- and SecD-like proteins were shown to stimulate a Th1 cell-mediated immune response in mice, and conferred protection when challenged with B.abortis []. Therefore, these proteins may have an antigenic role as well as a secretory one in virulent bacteria []. A number of previously uncharacterised "hypothetical" proteins also show similarity to E.coli YajC, suggesting that this family is wider than first thought []. More recently, the precise interactions between the E.coli SecYEG complex, SecD, SecF, YajC and YidC have been studied []. Rather than acting individually, the four proteins form a heterotetrameric complex and associate with the SecYEG heterotrimeric complex []. The SecF and YajC subunits link the complex to the integral membrane translocase. ; PDB: 2RDD_B.
Probab=29.71 E-value=81 Score=25.79 Aligned_cols=11 Identities=27% Similarity=0.311 Sum_probs=0.0
Q ss_pred ccccCcEEEec
Q 006493 155 KIQVGDIVKVE 165 (643)
Q Consensus 155 ~LvvGDIV~l~ 165 (643)
+|+|||-|...
T Consensus 36 ~Lk~Gd~VvT~ 46 (82)
T PF02699_consen 36 SLKPGDEVVTI 46 (82)
T ss_dssp -----------
T ss_pred cCCCCCEEEEC
Confidence 44455544443
No 56
>PF13253 DUF4044: Protein of unknown function (DUF4044)
Probab=27.93 E-value=1.9e+02 Score=19.58 Aligned_cols=19 Identities=21% Similarity=0.427 Sum_probs=12.4
Q ss_pred CCccChHHHHHHHHHHHHH
Q 006493 288 PSKRSGIEKKMDKIIFILF 306 (643)
Q Consensus 288 ~~k~s~l~~~~~~~~~~~~ 306 (643)
+.++|.+|+...-++..+.
T Consensus 3 kkkKS~fekiT~v~v~lM~ 21 (35)
T PF13253_consen 3 KKKKSTFEKITMVVVWLML 21 (35)
T ss_pred CccccHHHHHHHHHHHHHH
Confidence 4567888887765555443
No 57
>PF12148 DUF3590: Protein of unknown function (DUF3590); InterPro: IPR021991 This domain is found in eukaryotes, and is typically between 83 and 97 amino acids in length. It is found in association with PF00097 from PFAM, PF02182 from PFAM, PF00628 from PFAM, PF00240 from PFAM. There are two conserved sequence motifs: RAR and NYN. The domain is part of the protein NIRF which has zinc finger and ubiquitinating domains. The function of this domain is likely to be mainly structural, however this has not been confirmed. ; PDB: 3DB4_A 3ASK_A 3DB3_A 2L3R_A.
Probab=26.50 E-value=39 Score=27.82 Aligned_cols=24 Identities=25% Similarity=0.492 Sum_probs=13.6
Q ss_pred EEEeeeeccccCcEEEeccCcccC
Q 006493 148 FSYKPWEKIQVGDIVKVEKDQFFP 171 (643)
Q Consensus 148 ~~~i~~~~LvvGDIV~l~~ge~iP 171 (643)
...++|.+|.||++|.|.-+-.-|
T Consensus 58 Rt~l~w~~L~VG~~VMvNYN~d~P 81 (85)
T PF12148_consen 58 RTILKWDELKVGQVVMVNYNVDEP 81 (85)
T ss_dssp -SBE-GGG--TT-EEEEEE-TTST
T ss_pred eEeccHHhCCcccEEEEecCCCCc
Confidence 445899999999999997554333
No 58
>PRK11507 ribosome-associated protein; Provisional
Probab=26.47 E-value=56 Score=25.89 Aligned_cols=25 Identities=24% Similarity=0.278 Sum_probs=20.7
Q ss_pred EEeCCCeEEEeeeeccccCcEEEecc
Q 006493 141 VHVGNGVFSYKPWEKIQVGDIVKVEK 166 (643)
Q Consensus 141 V~~r~g~~~~i~~~~LvvGDIV~l~~ 166 (643)
|. -||+...-.-+.|.+||+|.+..
T Consensus 39 V~-VNGeve~rRgkKl~~GD~V~~~g 63 (70)
T PRK11507 39 VK-VDGAVETRKRCKIVAGQTVSFAG 63 (70)
T ss_pred eE-ECCEEecccCCCCCCCCEEEECC
Confidence 44 57888888899999999998854
No 59
>PF15584 Imm44: Immunity protein 44
Probab=25.34 E-value=32 Score=28.60 Aligned_cols=21 Identities=14% Similarity=0.137 Sum_probs=16.2
Q ss_pred cCcEEEeccCcccCccEEEEe
Q 006493 158 VGDIVKVEKDQFFPADLLFLS 178 (643)
Q Consensus 158 vGDIV~l~~ge~iPaD~ill~ 178 (643)
+.+...|+.|+.||||||=--
T Consensus 13 ~~~~~~I~SG~~iP~~GIwEP 33 (94)
T PF15584_consen 13 PSEGGVIKSGQEIPCDGIWEP 33 (94)
T ss_pred CCCCCEEecCCCcccCCeEcc
Confidence 345567889999999998644
No 60
>PF13275 S4_2: S4 domain; PDB: 1P9K_A.
Probab=24.33 E-value=46 Score=25.99 Aligned_cols=22 Identities=27% Similarity=0.502 Sum_probs=11.7
Q ss_pred CCCeEEEeeeeccccCcEEEec
Q 006493 144 GNGVFSYKPWEKIQVGDIVKVE 165 (643)
Q Consensus 144 r~g~~~~i~~~~LvvGDIV~l~ 165 (643)
-||+.+.-.-+.|.+||+|.+.
T Consensus 37 VNGe~e~rrg~Kl~~GD~V~~~ 58 (65)
T PF13275_consen 37 VNGEVETRRGKKLRPGDVVEID 58 (65)
T ss_dssp ETTB----SS----SSEEEEET
T ss_pred ECCEEccccCCcCCCCCEEEEC
Confidence 4788888888999999999983
No 61
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=23.14 E-value=1.2e+02 Score=29.58 Aligned_cols=20 Identities=25% Similarity=0.612 Sum_probs=9.1
Q ss_pred CcEEEeccCcccCccEEEEe
Q 006493 159 GDIVKVEKDQFFPADLLFLS 178 (643)
Q Consensus 159 GDIV~l~~ge~iPaD~ill~ 178 (643)
|....+...|.+|-|.++|.
T Consensus 42 ~~~~~i~~~~L~~GDiI~l~ 61 (230)
T PF00122_consen 42 GRWQKIPSSELVPGDIIILK 61 (230)
T ss_dssp TEEEEEEGGGT-TTSEEEEE
T ss_pred cccccchHhhccceeeeecc
Confidence 44444444444444444443
No 62
>PF09926 DUF2158: Uncharacterized small protein (DUF2158); InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function.
Probab=21.72 E-value=57 Score=24.35 Aligned_cols=13 Identities=23% Similarity=0.572 Sum_probs=10.9
Q ss_pred ccCcEEEeccCcc
Q 006493 157 QVGDIVKVEKDQF 169 (643)
Q Consensus 157 vvGDIV~l~~ge~ 169 (643)
.+||+|.|+.|-.
T Consensus 2 ~~GDvV~LKSGGp 14 (53)
T PF09926_consen 2 KIGDVVQLKSGGP 14 (53)
T ss_pred CCCCEEEEccCCC
Confidence 5899999998864
No 63
>smart00306 HintN Hint (Hedgehog/Intein) domain N-terminal region. Hedgehog/Intein domain, N-terminal region. Domain has been split to accommodate large insertions of endonucleases.
Probab=20.11 E-value=1.2e+02 Score=25.02 Aligned_cols=27 Identities=22% Similarity=0.270 Sum_probs=20.2
Q ss_pred EEEEEeCCCeEEEeeeeccccCcEEEec
Q 006493 138 KVSVHVGNGVFSYKPWEKIQVGDIVKVE 165 (643)
Q Consensus 138 ~~~V~~r~g~~~~i~~~~LvvGDIV~l~ 165 (643)
+..+. .++....+...+|++||.|.+.
T Consensus 73 ~~~~~-~~~~~~w~~a~~l~~gd~v~~~ 99 (100)
T smart00306 73 LLLVR-DGGKLVWVFASELKPGDYVLVP 99 (100)
T ss_pred EEEEe-cCCcEEEEEHHHCCCCCEEEec
Confidence 44455 5566667899999999999764
Done!