Query 006495
Match_columns 643
No_of_seqs 321 out of 1204
Neff 4.8
Searched_HMMs 29240
Date Tue Mar 26 18:57:59 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/006495.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_2121-2125//hhsearch_pdb/006495hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3mtc_A Type II inositol-1,4,5- 1.0 1 1 684.1 33.7 305 91-606 2-309 (313)
2 4a9c_A Phosphatidylinositol-3, 1.0 1 1 642.9 31.1 228 371-601 79-314 (316)
3 1i9z_A Synaptojanin, phosphati 1.0 1 1 627.6 34.3 317 77-611 10-328 (347)
4 2xsw_A 72 kDa inositol polypho 1.0 1 1 596.6 31.9 229 371-604 85-326 (357)
5 2imq_X Salivary nitrophorin; f 1.0 1 1 475.3 25.3 205 372-600 72-282 (282)
6 4gew_A 5'-tyrosyl-DNA phosphod 1.0 1 1 73.4 11.8 142 415-598 210-362 (362)
7 4gz1_A Tyrosyl-DNA phosphodies 1.0 1 1 72.5 14.6 146 414-598 99-254 (256)
8 4fva_A 5'-tyrosyl-DNA phosphod 1.0 1 1 72.0 11.8 142 415-598 104-256 (256)
9 3teb_A Endonuclease/exonucleas 1.0 1 1 71.7 14.3 141 414-598 120-266 (266)
10 1zwx_A SMCL, sphingomyelinase- 1.0 1 1 70.8 12.8 147 414-598 128-300 (301)
No 1
>3mtc_A Type II inositol-1,4,5-trisphosphate 5-phosphatas; INPP5BA,phosphoinositide 5-phosphatase, inositol signalling, phosphatase, magnesium; HET: PIF; 2.40A {Homo sapiens} PDB: 3n9v_A
Probab=1.00 E-value=1 Score=684.14 Aligned_cols=305 Identities=34% Similarity=0.649 Sum_probs=279.9
Q ss_pred CCEEEEEEEEEEEEECCCCCCCCCCCCCCCCCC-CCCCCEEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCC
Q ss_conf 430133899996320799899999993121388-9999799991354343698850156899734469999999741467
Q 006495 91 YINTKEVRICVGTWNVGGKLPPDDLDIDDWIDM-NEPADIYVLGLQEIVPLTAGNIFGAEDSRPVSKWENIIRDTLNRIR 169 (643)
Q Consensus 91 y~~~~~~ri~vGTwNV~G~~p~~~ldL~~WL~~-~~~~DIYVlGfQEiV~Lna~nvl~~~d~~~~~~W~~~I~~aLn~~~ 169 (643)
||..+++|||||||||||+.|++ +|.+||.. ..+||||||||||+ +|++++++.. ++.....|+.+|.++|+.
T Consensus 2 yt~~~~~~i~v~TwNvng~~~~~--~l~~wL~~~~~~pDI~viGlQE~-~l~~~~~~~~-~~~~~~~W~~~i~~~L~~-- 75 (313)
T 3mtc_A 2 YTYIQNFRFFAGTYNVNGQSPKE--CLRLWLSNGIQAPDVYCVGFQEL-DLSKEAFFFH-DTPKEEEWFKAVSEGLHP-- 75 (313)
T ss_dssp CEEEEEEEEEEEEEECTTCCCCS--CTHHHHSSSCCCCSEEEEEEECS-CCSHHHHTTC-CCHHHHHHHHHHHHHSCT--
T ss_pred CCEEECCEEEEEEEECCCCCCCH--HHHHHHCCCCCCCCEEEEEEEEC-CCCHHHHCCC-CCCHHHHHHHHHHHHCCC--
T ss_conf 72131118999999758824826--69998665678998499999861-6553231016-760377999999986179--
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 88886434689999999999999630233220268888787655577789997666787543223221111223334677
Q 006495 170 HTTGRVKSLSDPPSPSKFKPSEDIPDIEEEITHESDSDVGEEVYPLDDENNGFDEVNDKPVKMFTNYEVSACADSAKLDM 249 (643)
Q Consensus 170 ~~~~~~~~~s~ppsp~~~~~s~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (643)
T Consensus 76 -------------------------------------------------------------------------------- 75 (313)
T 3mtc_A 76 -------------------------------------------------------------------------------- 75 (313)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
T ss_conf --------------------------------------------------------------------------------
Q ss_pred CCHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 30110001368984201333310022468887610002100000245654468799999742010011258775221134
Q 006495 250 PAENNLQRHFSSPKRFDRLYCLRMEESKGNVEAPAVQYNGRLTKMLSGSERIGLSWPEPPLNLLTQKVLERPNSLKTVKS 329 (643)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~s~~~r~~~~~~e~~~~~~~~~~~~~~~s~~~~~~ 329 (643)
T Consensus 76 -------------------------------------------------------------------------------- 75 (313)
T 3mtc_A 76 -------------------------------------------------------------------------------- 75 (313)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
T ss_conf --------------------------------------------------------------------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEHHHEEEEEEEECCCCCCCCCEEEEEEEEC
Q ss_conf 35665422346777775541168887776658998731199984999842024002200352443333440067589611
Q 006495 330 FKTSNSFRRYSSFKPAVDDMSSELALLAEIDIETLMKRKRRSSYVRMVSKQMVGIFLTIWVRRSLRRHIQNVRVSTVGVG 409 (643)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~i~SkqMvGI~L~V~vr~~L~~~I~~v~vs~Vg~G 409 (643)
...|++|+++|||||+|+||||.++.++|+++++++|+||
T Consensus 76 ----------------------------------------~~~Y~~v~s~~lvGl~l~Vfvr~~~~~~i~~v~~~~v~tG 115 (313)
T 3mtc_A 76 ----------------------------------------DAKYAKVKLIRLVGIMLLLYVKQEHAAYISEVEAETVGTG 115 (313)
T ss_dssp ----------------------------------------TSCEEEEEEEEETTEEEEEEEEGGGGGGEEEEEEEEEECS
T ss_pred ----------------------------------------CCCEEEEEEECHHHHHHHHHHHHHHHHHCCEEEEEEECCC
T ss_conf ----------------------------------------9988999981123110222006655521512584336331
Q ss_pred CCCCCCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCC
Q ss_conf 14323550299999998796889983338999999667898540999987348788878899864477532899576675
Q 006495 410 VMGFIGNKGSVSVSMSIHQTLFCFVCAHLTSGEKDGDELKRNADVHEIHRRTHFRSHSEIGFPKSICDHERIIWLGDLNY 489 (643)
Q Consensus 410 i~G~lGNKGaVsVsl~l~~tslcFVnsHLaAgek~~d~~rRN~D~~eIl~r~~F~~~~~~~~P~~I~dhD~iiwlGDLNY 489 (643)
+||++||||||+|||.+++|+||||||||+||+++ ..+||+|+.+|++++.|+.......|.+|.+||++||+|||||
T Consensus 116 ~~g~~GNKGaV~ir~~~~~ts~cFVnsHLaA~~~~--~~~Rn~d~~~I~~~l~f~~~~~~~~~~~i~~~d~vfw~GDLNy 193 (313)
T 3mtc_A 116 IMGRMGNKGGVAIRFQFHNTSICVVNSHLAAHIEE--YERRNQDYKDICSRMQFCQPDPSLPPLTISNHDVILWLGDLNY 193 (313)
T ss_dssp GGGTSTTSEEEEEEEEETTEEEEEEEEECCCSGGG--HHHHHHHHHHHHHHCCBCCSCSSSCCBCTTSSSEEEEEEECCC
T ss_pred CCCCCCCCCEEEEEEEECCCEEEEEEECCCCCCHH--HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCC
T ss_conf 34522677529999998782899996436888517--9999999999998446687787667753467755999566666
Q ss_pred CCC-CCHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf 446-9947899999521646774333536987519865576657856699865336886666889988888974344342
Q 006495 490 RIN-LPYEKTRELISKKQWSKLAESDQLLRELRKGRAFDGWSEGTLIFAPTYKYELNSEKYYGEDPKVGRRNPSWCDRIL 568 (643)
Q Consensus 490 RI~-l~~~~v~~lI~~~~~~~LLe~DQL~~e~~~g~~F~gf~Eg~I~FpPTYKy~~~Sd~Y~~~~~~~kkR~PAWCDRIL 568 (643)
||+ ++.++++++|+.++|..||++|||++|+++|++|.||.||+|+|||||||+.|++.|++ ++|+|+||||||||
T Consensus 194 Ri~~~~~~~v~~~i~~~~~~~Ll~~DQL~~~~~~g~~f~gf~E~~I~F~PTYKyd~~s~~ydt---s~k~R~PsWcDRIL 270 (313)
T 3mtc_A 194 RIEELDVEKVKKLIEEKDFQMLYAYDQLKIQVAAKTVFEGFTEGELTFQPTYKYDTGSDDWDT---SEKCRAPAWCDRIL 270 (313)
T ss_dssp CBCSSCHHHHHHHHHTTCHHHHHTTBHHHHHHHTTSSCTTCBCCCCCSCCCBCBCTTSSSBCC---STTCCCCBCCEEEE
T ss_pred CCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC---CCCEECCCCCCEEE
T ss_conf 656799899999986388999987689999987688558853388575998667689864244---35772566545378
Q ss_pred ECCCCEEEEEECCC-CCCCCCCCCCEEEEEEEEEECCHH
Q ss_conf 11787079765035-578899978110799798860956
Q 006495 569 SYGKGMRLLNYRRN-EIKMSDHRPVTATYMAEVEVFSPR 606 (643)
Q Consensus 569 ~~g~gi~~l~Y~s~-e~~~SDHRPV~A~F~v~V~v~~~~ 606 (643)
|++++++++.|.+. ++++||||||+|+|.+++.|+.+.
T Consensus 271 ~~~~~i~~~~Y~s~~~~~~SDHrPV~a~f~~~~~~~~~~ 309 (313)
T 3mtc_A 271 WKGKNITQLSYQSHMALKTSDHKPVSSVFDIGVRVVAHH 309 (313)
T ss_dssp EEESSEEEEEEEECTTCCSSSSCCEEEEEEEEEEEECCC
T ss_pred EECCCEEEEEEEECCCCCCCCCCCEEEEEEEEEEEEECC
T ss_conf 705875887453546736779637579999988786223
No 2
>4a9c_A Phosphatidylinositol-3,4,5-trisphosphate 5-phosph; SGC, signalling, structural genomics consortium stockholm, magnesium binding, hydrolase; HET: B5F; 2.10A {Homo sapiens} PDB: 3nr8_B*
Probab=1.00 E-value=1 Score=642.94 Aligned_cols=228 Identities=32% Similarity=0.510 Sum_probs=205.0
Q ss_pred CCEEEEEEEEHHHEEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCHHHH
Q ss_conf 98499984202400220035244333344006758961114323550299999998796889983338999999667898
Q 006495 371 SSYVRMVSKQMVGIFLTIWVRRSLRRHIQNVRVSTVGVGVMGFIGNKGSVSVSMSIHQTLFCFVCAHLTSGEKDGDELKR 450 (643)
Q Consensus 371 ~~Y~~i~SkqMvGI~L~V~vr~~L~~~I~~v~vs~Vg~Gi~G~lGNKGaVsVsl~l~~tslcFVnsHLaAgek~~d~~rR 450 (643)
..|++|+++||+||+|+||||.++.++|+++++++|+||++|++||||||+|+|.+++++||||||||+||++ +..+|
T Consensus 79 ~~Y~~v~s~~L~gi~l~Vfvk~~~~~~I~~v~~~~v~tG~~g~~GNKGaV~ir~~~~~ts~~FVn~HLaAg~~--~~~~R 156 (316)
T 4a9c_A 79 LDYRPIAMQSLWNIKVAVLVKPEHENRISHVSTSSVKTGIANTLGNKGAVGVSFMFNGTSFGFVNCHLTSGNE--KTARR 156 (316)
T ss_dssp CCCEEEEEEEETTEEEEEEECGGGGGGEEEEEEEEEEEC------CEEEEEEEEEETTEEEEEEEEECCCSTT--CHHHH
T ss_pred CCEEEEEEEEEHHEEEEEEEEHHHHHHCCCCCCCEEEEEEEEECCCCCEEEEEEEECCCEEEEEEECCCCCCH--HHHHH
T ss_conf 8879998650001425337768786327111545454303572588865999999878289999763456753--88899
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 54099998734878887889986447753289957667544699478999995216467743335369875198655766
Q 006495 451 NADVHEIHRRTHFRSHSEIGFPKSICDHERIIWLGDLNYRINLPYEKTRELISKKQWSKLAESDQLLRELRKGRAFDGWS 530 (643)
Q Consensus 451 N~D~~eIl~r~~F~~~~~~~~P~~I~dhD~iiwlGDLNYRI~l~~~~v~~lI~~~~~~~LLe~DQL~~e~~~g~~F~gf~ 530 (643)
|+|+.+|++++.|.... ......+.+||||||+|||||||++++++++++|+.++|..||++|||++|+++|++|.||.
T Consensus 157 n~d~~~I~~~l~f~~~~-~~~~d~~~~~d~vfw~GDLNyRi~~~~~~v~~~i~~~~~~~Ll~~DQL~~e~~~g~~F~gf~ 235 (316)
T 4a9c_A 157 NQNYLDILRLLSLGDRQ-LNAFDISLRFTHLFWFGDLNYRLDMDIQEILNYISRKEFEPLLRVDQLNLEREKHKVFLRFS 235 (316)
T ss_dssp HHHHHHHHHHCCC--------CCTTTTSSEEEEEEECCCCBSSCHHHHHHHHHTTCCHHHHTTBHHHHHHHTTSSSTTCB
T ss_pred HHHHHHHHHHCCCCCCC-CCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCHHHHHCCCHHHHHHHCCCCCCCCC
T ss_conf 99999999747778877-67455677678699868746784899899999885066999861681789986598553310
Q ss_pred CCCCCCCCCCCCCCCCC-CCCCCC---CCCCCCCCCCCCCEEECCC---CEEEEEECC-CCCCCCCCCCCEEEEEEEEE
Q ss_conf 57856699865336886-666889---9888889743443421178---707976503-55788999781107997988
Q 006495 531 EGTLIFAPTYKYELNSE-KYYGED---PKVGRRNPSWCDRILSYGK---GMRLLNYRR-NEIKMSDHRPVTATYMAEVE 601 (643)
Q Consensus 531 Eg~I~FpPTYKy~~~Sd-~Y~~~~---~~~kkR~PAWCDRIL~~g~---gi~~l~Y~s-~e~~~SDHRPV~A~F~v~V~ 601 (643)
||+|+|||||||+.|++ .|+++. .+.++|+|||||||||++. .++++.|.+ .++++||||||+|+|.+.|.
T Consensus 236 E~~i~F~PTYKy~~~s~~~y~~~~~~~~~~k~R~PaWcDRIL~~~~~~~~i~~~~Y~s~~~~~~SDHrPV~a~f~v~V~ 314 (316)
T 4a9c_A 236 EEEISFPPTYRYERGSRDTYAWHKQKPTGVRTNVPSWCDRILWKSYPETHIICNSYGCTDDIVTSDHSPVFGTFEVGVT 314 (316)
T ss_dssp CCCCCSCCCBCBCTTCSSCBCCC--------CCCCBCCEEEEEEECTTCCEEEEEEEECSSCCSSSSCCEEEEEEEECC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEEEE
T ss_conf 5884668876366898643244345566654257762004775057877249856532277677883247789999988
No 3
>1i9z_A Synaptojanin, phosphatidylinositol phosphate phosphatase; spsynaptojanin, IPP5C, IP3, IP2,, hydrolase; HET: 2IP; 1.80A {Schizosaccharomyces pombe} SCOP: d.151.1.2 PDB: 1i9y_A*
Probab=1.00 E-value=1 Score=627.57 Aligned_cols=317 Identities=34% Similarity=0.587 Sum_probs=289.2
Q ss_pred HHHHHHCCHHHHCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCCC--CCCCCEEEEEEEEEEECCCCCCCCCCCCCCH
Q ss_conf 67762012010013430133899996320799899999993121388--9999799991354343698850156899734
Q 006495 77 PRIRRRKSETFRAQYINTKEVRICVGTWNVGGKLPPDDLDIDDWIDM--NEPADIYVLGLQEIVPLTAGNIFGAEDSRPV 154 (643)
Q Consensus 77 ~~~~~~~~e~~r~~y~~~~~~ri~vGTwNV~G~~p~~~ldL~~WL~~--~~~~DIYVlGfQEiV~Lna~nvl~~~d~~~~ 154 (643)
..+++|..| |+..++++||||||||||+.|+ .||.+||.. ..+||||||||||||+|+++++++. |+.+.
T Consensus 10 ~~l~~r~~e-----~~~~~~~~i~v~TwNv~g~~~~--~~l~~~L~~~~~~~~DI~viglQEiv~l~~~~~~~~-~~~~~ 81 (347)
T 1i9z_A 10 HELRKRENE-----FSEHKNVKIFVASYNLNGCSAT--TKLENWLFPENTPLADIYVVGFQEIVQLTPQQVISA-DPAKR 81 (347)
T ss_dssp HHHHHTGGG-----TEEEEEEEEEEEEEECTTCCCC--SCCHHHHSCSSSCCCSEEEEEEECSSCCC-----CC-CHHHH
T ss_pred HHHHHHHHH-----CCCCCCCEEEEEEEECCCCCCC--HHHHHHHCCCCCCCCCEEEEEEEEEECCCHHHHCCC-CCHHH
T ss_conf 999988871-----5787886799996736997885--558987563457888879998688403761120246-84167
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 46999999974146788886434689999999999999630233220268888787655577789997666787543223
Q 006495 155 SKWENIIRDTLNRIRHTTGRVKSLSDPPSPSKFKPSEDIPDIEEEITHESDSDVGEEVYPLDDENNGFDEVNDKPVKMFT 234 (643)
Q Consensus 155 ~~W~~~I~~aLn~~~~~~~~~~~~s~ppsp~~~~~s~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (643)
..|+.+|+++|+...+
T Consensus 82 ~~w~~~i~~~L~~~~~---------------------------------------------------------------- 97 (347)
T 1i9z_A 82 REWESCVKRLLNGKCT---------------------------------------------------------------- 97 (347)
T ss_dssp HHHHHHHHHHHHHTCC----------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHCCC----------------------------------------------------------------
T ss_conf 8999999998742036----------------------------------------------------------------
Q ss_pred CCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 22111122333467730110001368984201333310022468887610002100000245654468799999742010
Q 006495 235 NYEVSACADSAKLDMPAENNLQRHFSSPKRFDRLYCLRMEESKGNVEAPAVQYNGRLTKMLSGSERIGLSWPEPPLNLLT 314 (643)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~s~~~r~~~~~~e~~~~~~~ 314 (643)
T Consensus 98 -------------------------------------------------------------------------------- 97 (347)
T 1i9z_A 98 -------------------------------------------------------------------------------- 97 (347)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
T ss_conf --------------------------------------------------------------------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEHHHEEEEEEEECCC
Q ss_conf 01125877522113435665422346777775541168887776658998731199984999842024002200352443
Q 006495 315 QKVLERPNSLKTVKSFKTSNSFRRYSSFKPAVDDMSSELALLAEIDIETLMKRKRRSSYVRMVSKQMVGIFLTIWVRRSL 394 (643)
Q Consensus 315 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~i~SkqMvGI~L~V~vr~~L 394 (643)
.+..|+++.++||+|++|+||+|.++
T Consensus 98 ------------------------------------------------------~~~~Y~~v~s~~l~g~~L~Vfvr~~~ 123 (347)
T 1i9z_A 98 ------------------------------------------------------SGPGYVQLRSGQLVGTALMIFCKESC 123 (347)
T ss_dssp ------------------------------------------------------SSCCEEEEEEEEETTEEEEEEEEGGG
T ss_pred ------------------------------------------------------CCCCEEEEEEEECCCEEEEEEEEHHH
T ss_conf ------------------------------------------------------88852689874013469999980576
Q ss_pred CCCCCCEEEEEEEECCCCCCCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 33344006758961114323550299999998796889983338999999667898540999987348788878899864
Q 006495 395 RRHIQNVRVSTVGVGVMGFIGNKGSVSVSMSIHQTLFCFVCAHLTSGEKDGDELKRNADVHEIHRRTHFRSHSEIGFPKS 474 (643)
Q Consensus 395 ~~~I~~v~vs~Vg~Gi~G~lGNKGaVsVsl~l~~tslcFVnsHLaAgek~~d~~rRN~D~~eIl~r~~F~~~~~~~~P~~ 474 (643)
+++|+++.+++|++|++|++||||+|+++|.+++++||||||||+||+.+ ..+||+|+.+|++++.|.. +..
T Consensus 124 ~~~i~~v~~~~v~tG~~g~~gnKGav~vr~~~~~~~l~fvn~HLaa~~~~--~~~R~~d~~~I~~~l~f~~------~~~ 195 (347)
T 1i9z_A 124 LPSIKNVEGTVKKTGLGGVSGNKGAVAIRFDYEDTGLCFITSHLAAGYTN--YDERDHDYRTIASGLRFRR------GRS 195 (347)
T ss_dssp GGGEEEEEEEEEECCCC----CCEEEEEEEEETTEEEEEEEEECCCCSSC--HHHHHHHHHHHHHHCCCGG------GCC
T ss_pred HHHCCCEEEEEEECCCCCCCCCCCEEEEEEEECCEEEEEEEECCCCCCCC--HHHHHHHHHHHHHHHCCCC------CCC
T ss_conf 41034246205731688756888559999998996999998517788854--8899999999998624576------544
Q ss_pred CCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 47753289957667544699478999995216467743335369875198655766578566998653368866668899
Q 006495 475 ICDHERIIWLGDLNYRINLPYEKTRELISKKQWSKLAESDQLLRELRKGRAFDGWSEGTLIFAPTYKYELNSEKYYGEDP 554 (643)
Q Consensus 475 I~dhD~iiwlGDLNYRI~l~~~~v~~lI~~~~~~~LLe~DQL~~e~~~g~~F~gf~Eg~I~FpPTYKy~~~Sd~Y~~~~~ 554 (643)
|.+||++||+|||||||+++.+.++++|+.++|..||++|||+.++++|++|.||.|++|+|||||||+.+++.|++
T Consensus 196 i~~~d~v~~~GDlNyRi~~~~~~v~~~i~~~~~~~Ll~~DqL~~~~~~~~~f~~f~E~~i~F~PTYK~~~~~~~yd~--- 272 (347)
T 1i9z_A 196 IFNHDYVVWFGDFNYRISLTYEEVVPCIAQGKLSYLFEYDQLNKQMLTGKVFPFFSELPITFPPTYKFDIGTDIYDT--- 272 (347)
T ss_dssp TTSSSEEEEEEECCCCBSSCHHHHHHHHHTTCHHHHHTTBHHHHHHHTTSSSTTCBCCCCCSCCCBCBCTTSSCBCC---
T ss_pred CCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC---
T ss_conf 35676189964436655777899999986404777630237799986177665444678788987446788864344---
Q ss_pred CCCCCCCCCCCCEEECCCCEEEEEECCCCCCCCCCCCCEEEEEEEEEECCHHHHHHH
Q ss_conf 888889743443421178707976503557889997811079979886095645310
Q 006495 555 KVGRRNPSWCDRILSYGKGMRLLNYRRNEIKMSDHRPVTATYMAEVEVFSPRKLQRA 611 (643)
Q Consensus 555 ~~kkR~PAWCDRIL~~g~gi~~l~Y~s~e~~~SDHRPV~A~F~v~V~v~~~~k~qr~ 611 (643)
++++|+|||||||||++ .++++.|.+.++++||||||+|.|.+.|.++++.++++.
T Consensus 273 s~k~R~PsWcDRIL~~~-~l~~~~Y~~~~~~~SDH~PV~a~f~~~v~~~~~~~~~~~ 328 (347)
T 1i9z_A 273 SDKHRVPAWTDRILYRG-ELVPHSYQSVPLYYSDHRPIYATYEANIVKVDREKKKIL 328 (347)
T ss_dssp STTCCCCBCCEEEEEES-SCEEEEEEECCCCSSSBCCEEEEEEEEEEEECHHHHHHH
T ss_pred CCCCCCCCCCCEEEEEC-CEEEEEEEECCCCCCCCCCCEEEEEEEEECCCHHHHHHH
T ss_conf 45634775465699748-878988775675679957711079888742799999999
No 4
>2xsw_A 72 kDa inositol polyphosphate 5-phosphatase; inositol signalling, SGC stockholm, structural genomics CONS hydrolase; 1.90A {Homo sapiens}
Probab=1.00 E-value=1 Score=596.64 Aligned_cols=229 Identities=27% Similarity=0.472 Sum_probs=206.8
Q ss_pred CCEEEEEEEEHHHEEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCHHHH
Q ss_conf 98499984202400220035244333344006758961114323550299999998796889983338999999667898
Q 006495 371 SSYVRMVSKQMVGIFLTIWVRRSLRRHIQNVRVSTVGVGVMGFIGNKGSVSVSMSIHQTLFCFVCAHLTSGEKDGDELKR 450 (643)
Q Consensus 371 ~~Y~~i~SkqMvGI~L~V~vr~~L~~~I~~v~vs~Vg~Gi~G~lGNKGaVsVsl~l~~tslcFVnsHLaAgek~~d~~rR 450 (643)
+.|+++.+.||+|++|+||+|.++.++|+++++++|++|++|++||||+|+|+|.+++++||||||||+||+++ ..+|
T Consensus 85 ~~Y~~v~s~~l~g~~l~Vfvr~~~~~~i~~v~~~~v~tG~~g~~gNKGav~vr~~~~~t~~~Fvn~HLaa~~~~--~~~R 162 (357)
T 2xsw_A 85 PHYVLLSSAAHGVLYMSLFIRRDLIWFCSEVECSTVTTRIVSQIKTKGALGISFTFFGTSFLFITSHFTSGDGK--VAER 162 (357)
T ss_dssp TTEEEEEEEEETTEEEEEEEEGGGGGGBBCCEEEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEECCCSTTC--HHHH
T ss_pred CCCCCHHHHHHHHEEEEEEECHHHHHCCCEEEECCCCCCCCCCCCCCCEEEEEEEECCEEEEEEEECCCCCCCH--HHHH
T ss_conf 86430366653238899998238861076268544125645643665079999998990899998746789832--8999
Q ss_pred HHHHHHHHHHCCCCCCCCCCC------CCCCCCCCEEEEECCCCCCCCCCHHHHHHHHH---HHCHHHHHHHHHHHHHHH
Q ss_conf 540999987348788878899------86447753289957667544699478999995---216467743335369875
Q 006495 451 NADVHEIHRRTHFRSHSEIGF------PKSICDHERIIWLGDLNYRINLPYEKTRELIS---KKQWSKLAESDQLLRELR 521 (643)
Q Consensus 451 N~D~~eIl~r~~F~~~~~~~~------P~~I~dhD~iiwlGDLNYRI~l~~~~v~~lI~---~~~~~~LLe~DQL~~e~~ 521 (643)
|+|+.+|++++.|+....... ...+.+||++||+|||||||++++.++++++. .++|..|+++|||+.+++
T Consensus 163 n~d~~~I~~~l~f~~~~~~~~~~~~~~~~~~~~~d~vfw~GDlNyRi~~~~~~v~~~i~~~~~~~~~~Ll~~DQL~~~~~ 242 (357)
T 2xsw_A 163 LLDYTRTVQALVLPRNVPDTNPYRSSAADVTTRFDEVFWFGDFNFRLSGGRTVVDALLCQGLVVDVPALLQHDQLIREMR 242 (357)
T ss_dssp HHHHHHHHHHCCCCSSSCCSSGGGCBTTBGGGSSSEEEEEEECCCCBSSCHHHHHHHHC---CCCHHHHHTTBHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCHHHHHHH
T ss_conf 99999999974256556655543444333345665389955457666656688999986111002999876576589886
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECC---CCEEEEEECCC-CCCCCCCCCCEEEEE
Q ss_conf 19865576657856699865336886666889988888974344342117---87079765035-578899978110799
Q 006495 522 KGRAFDGWSEGTLIFAPTYKYELNSEKYYGEDPKVGRRNPSWCDRILSYG---KGMRLLNYRRN-EIKMSDHRPVTATYM 597 (643)
Q Consensus 522 ~g~~F~gf~Eg~I~FpPTYKy~~~Sd~Y~~~~~~~kkR~PAWCDRIL~~g---~gi~~l~Y~s~-e~~~SDHRPV~A~F~ 597 (643)
+|++|.||.|++|+|||||||+.+++.|++ ++++|+|||||||||++ ..++++.|.+. ++++||||||+|.|.
T Consensus 243 ~g~~F~gf~E~~I~F~PTYKy~~~t~~Ydt---s~k~R~PaWcDRIL~~~~~~~~i~~~~Y~s~~~~~~SDHrPV~a~f~ 319 (357)
T 2xsw_A 243 KGSIFKGFQEPDIHFLPSYKFDIGKDTYDS---TSKQRTPSYTDRVLYRSRHKGDICPVSYSSCPGIKTSDHRPVYGLFR 319 (357)
T ss_dssp HTSSSTTCBCCCCCSCCCBCBCTTSSSBCC---STTCCCCBCCEEEEEEESSTTSEEEEEEEECTTCCSSSSCCEEEEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC---CCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCCCCCCCCCEEEEE
T ss_conf 166245745167788988312589866556---67777876203699964889956888967506604789677536999
Q ss_pred EEEEECC
Q ss_conf 7988609
Q 006495 598 AEVEVFS 604 (643)
Q Consensus 598 v~V~v~~ 604 (643)
+.+....
T Consensus 320 v~v~~~~ 326 (357)
T 2xsw_A 320 VKVRPGR 326 (357)
T ss_dssp EECCCCC
T ss_pred EEEECCC
T ss_conf 9975177
No 5
>2imq_X Salivary nitrophorin; ferrous heme, beta-sandwich, transport protein; HET: HEM; 1.30A {Cimex lectularius} SCOP: d.151.1.2 PDB: 1ntf_A* 1y21_A* 1yjh_A* 1si6_X*
Probab=1.00 E-value=1 Score=475.30 Aligned_cols=205 Identities=22% Similarity=0.430 Sum_probs=183.9
Q ss_pred CEEEEEE--EEHHHEEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCHHH
Q ss_conf 8499984--20240022003524433334400675896111432355029999999879688998333899999966789
Q 006495 372 SYVRMVS--KQMVGIFLTIWVRRSLRRHIQNVRVSTVGVGVMGFIGNKGSVSVSMSIHQTLFCFVCAHLTSGEKDGDELK 449 (643)
Q Consensus 372 ~Y~~i~S--kqMvGI~L~V~vr~~L~~~I~~v~vs~Vg~Gi~G~lGNKGaVsVsl~l~~tslcFVnsHLaAgek~~d~~r 449 (643)
.|+++.+ .+|+|++++||+|.++.+.|+++.+ +|++|.+||||+|.++|.+++++||||||||++++.+ ..+
T Consensus 72 ~Y~~v~~~~~~~~G~~l~vf~k~~~~~~i~~~~~----~~~~g~~g~kGav~~r~~~~~~~~~fvn~HL~~~~~~--~~~ 145 (282)
T 2imq_X 72 GYTKLKNTITETMGLTVYCLEKHLDQNTLKNETI----IVTVDDQKKSGGIVTSFTIYNKRFSFTTSRMSDEDVT--STN 145 (282)
T ss_dssp TEEEEEEEECSSEEEEEEEEGGGCCTTTCCCEEE----EEECSTTSCSEEEEEEEEETTEEEEEEEEECCTTCCC--TTS
T ss_pred CEEEEEECCCCEEEEEEEEEECCCCCCCCEEEEE----CCCCCCCCCCCEEEEEEEECCEEEEEEEECCCCCCCH--HHH
T ss_conf 6589876157406999999974544762346540----4415656687149999998998999999778899733--899
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 85409999873487888788998644775328995766754469947899999521646774333536987519865576
Q 006495 450 RNADVHEIHRRTHFRSHSEIGFPKSICDHERIIWLGDLNYRINLPYEKTRELISKKQWSKLAESDQLLRELRKGRAFDGW 529 (643)
Q Consensus 450 RN~D~~eIl~r~~F~~~~~~~~P~~I~dhD~iiwlGDLNYRI~l~~~~v~~lI~~~~~~~LLe~DQL~~e~~~g~~F~gf 529 (643)
|++++..|++++.+ +.+++++||+||||||++.+.++++++|+.++|..|+++|||..+++ |.+|.||
T Consensus 146 R~~~~~~I~~~~~~-----------~~~~~~vi~~GDfN~r~~~~~~~~~~~i~~~~~~~l~~~DqL~~~~~-~~~f~~f 213 (282)
T 2imq_X 146 TKYAYDTRLDYSKK-----------DDPSDFLFWIGDLNVRVETNATHAKSLVDQNNIDGLMAFDQLKKAKE-QKLFDGW 213 (282)
T ss_dssp SSSSCCGGGCTTSS-----------SSCCSEEEEEEECSCCBCSCHHHHHHHHHTTCHHHHHTTBTHHHHHH-TTSSTTC
T ss_pred HHHHHHHHHHHHHC-----------CCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHC-CCCCCCC
T ss_conf 99999999986423-----------67655489954346666889899999876346888765227877644-5624556
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECC---CCEEEEEECCC-CCCCCCCCCCEEEEEEEE
Q ss_conf 657856699865336886666889988888974344342117---87079765035-578899978110799798
Q 006495 530 SEGTLIFAPTYKYELNSEKYYGEDPKVGRRNPSWCDRILSYG---KGMRLLNYRRN-EIKMSDHRPVTATYMAEV 600 (643)
Q Consensus 530 ~Eg~I~FpPTYKy~~~Sd~Y~~~~~~~kkR~PAWCDRIL~~g---~gi~~l~Y~s~-e~~~SDHRPV~A~F~v~V 600 (643)
.|++|+|+|||||+.+++.|+ .+|+|||||||||++ ..++++.|.+. ++.+|||+||+|.|.+.+
T Consensus 214 ~e~~i~f~PTYk~~~~~~~y~------~~R~Psw~DrIl~~~~~~~~~~~~~y~~~~~~~~SDH~PV~a~f~~~~ 282 (282)
T 2imq_X 214 TEPQVTFKPTYKFKPNTDEYD------LSATPSWTDRALYKSGTGKTIQPLSYNSLTNYKQTEHRPVLAKFRVTL 282 (282)
T ss_dssp BCCCCCSCCCBCBCTTSSCBC------TTSCCBCCEEEEEECSSSCCEEEEEEEECTTCCSSSSCCEEEEEEEEC
T ss_pred CCCCCCCCCCCCCCCCCCCCC------CCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEEC
T ss_conf 668868898862667975436------668865455699966888725863761789977789377178999979
No 6
>4gew_A 5'-tyrosyl-DNA phosphodiesterase; 5'-phosphotyrosyl-DNA diesterase, hydrolase; 2.35A {Caenorhabditis elegans} PDB: 4f1i_A
Probab=1.00 E-value=1 Score=73.39 Aligned_cols=142 Identities=20% Similarity=0.146 Sum_probs=75.9
Q ss_pred CCEEEEEEEEEECCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCC
Q ss_conf 55029999999879688998333899999966789854099998734878887889986447753289957667544699
Q 006495 415 GNKGSVSVSMSIHQTLFCFVCAHLTSGEKDGDELKRNADVHEIHRRTHFRSHSEIGFPKSICDHERIIWLGDLNYRINLP 494 (643)
Q Consensus 415 GNKGaVsVsl~l~~tslcFVnsHLaAgek~~d~~rRN~D~~eIl~r~~F~~~~~~~~P~~I~dhD~iiwlGDLNYRI~l~ 494 (643)
...+++.+.+.+.+..|+++|+||.++.. ....|..++..++....... .......+|+.||||-+-...
T Consensus 210 ~~r~~l~~~i~~~g~~l~v~ntHL~s~~~--~~~~R~~Q~~~l~~~~~~~~--------~~~~~~pvIl~GDFN~~p~~~ 279 (362)
T 4gew_A 210 MYRTLQILEGSIGGLKVFLLNTHLESTRE--HRPQRCAQFGFCMDKVREII--------AQNPGALVFFGGDLNLRDEEV 279 (362)
T ss_dssp SCCEEEEEEEEETTEEEEEEEEECCCSGG--GHHHHHHHHHHHHHHHHHHH--------HHCTTCEEEEEEECCCCGGGC
T ss_pred CCCEEEEEEEEECCEEEEEEEECCCCCCC--CHHHHHHHHHHHHHHHHHHH--------HCCCCCCEEEEECCCCCCCCC
T ss_conf 66369999999899899999705886541--04679999999999867654--------217898759841389997420
Q ss_pred HHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCEEECC
Q ss_conf 47899999521646774333536987519865576657--8566998653368866668899888889743-44342117
Q 006495 495 YEKTRELISKKQWSKLAESDQLLRELRKGRAFDGWSEG--TLIFAPTYKYELNSEKYYGEDPKVGRRNPSW-CDRILSYG 571 (643)
Q Consensus 495 ~~~v~~lI~~~~~~~LLe~DQL~~e~~~g~~F~gf~Eg--~I~FpPTYKy~~~Sd~Y~~~~~~~kkR~PAW-CDRIL~~g 571 (643)
.. ....| ...|.+. +-....||-...+... ...+.|.| .|+||+.+
T Consensus 280 ~~------~~~gl------------------~Da~~~~~~~~~~~~Tw~~~~n~~~-------~~~~~~~~RIDyIf~s~ 328 (362)
T 4gew_A 280 SR------VPDGV------------------KDAWEAAGSDNKTKFTWDTFKNDNK-------QGFHGAKMRFDRLYWSG 328 (362)
T ss_dssp CC------CCTTC------------------EEHHHHTTCCGGGCCSEETTTCTTS-------CCSSCCEECCEEEEEES
T ss_pred CH------HCCHH------------------HHHHHHHCCCCCCCCCCCCCCCCCC-------CCCCCCCCCEEEEEECC
T ss_conf 10------00007------------------7899985899778857665467655-------66789882528999759
Q ss_pred CCEEEEEEC-----CC---CCCCCCCCCCEEEEEE
Q ss_conf 870797650-----35---5788999781107997
Q 006495 572 KGMRLLNYR-----RN---EIKMSDHRPVTATYMA 598 (643)
Q Consensus 572 ~gi~~l~Y~-----s~---e~~~SDHRPV~A~F~v 598 (643)
. ++...+. +. ....|||.||.|.|++
T Consensus 329 ~-l~~~~~~vi~~~ri~~~~~~pSDH~pV~A~FSa 362 (362)
T 4gew_A 329 P-LDKVKFTLEGRQRIRSCLCFPSDHWAINATFFA 362 (362)
T ss_dssp S-CCEEEEEEECCSCCTTTSSCSCSSCEEEEEEEC
T ss_pred C-CCEEEEEEEEEEECCCCCCCCCCCCCEEEEECC
T ss_conf 8-613689998665447889897753187999849
No 7
>4gz1_A Tyrosyl-DNA phosphodiesterase 2; protein-DNA complex, DNA repair, 5'-DNA END processing, endonuclease/exonuclease/phosphatase domain; HET: DNA EPE; 1.50A {Mus musculus} PDB: 4gyz_A* 4gz0_A* 4gz2_A*
Probab=1.00 E-value=1 Score=72.51 Aligned_cols=146 Identities=18% Similarity=0.165 Sum_probs=76.5
Q ss_pred CCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCC
Q ss_conf 35502999999987968899833389999996678985409999873487888788998644775328995766754469
Q 006495 414 IGNKGSVSVSMSIHQTLFCFVCAHLTSGEKDGDELKRNADVHEIHRRTHFRSHSEIGFPKSICDHERIIWLGDLNYRINL 493 (643)
Q Consensus 414 lGNKGaVsVsl~l~~tslcFVnsHLaAgek~~d~~rRN~D~~eIl~r~~F~~~~~~~~P~~I~dhD~iiwlGDLNYRI~l 493 (643)
...++.+.+.+.+.+..|.++|+||.++... ...|..++..|++.+.- ......+|++||||..-
T Consensus 99 ~~~~~~~~~~~~~~~~~~~v~~~Hl~~~~~~--~~~~~~q~~~~~~~l~~-----------~~~~~pvIl~GDfN~~~-- 163 (256)
T 4gz1_A 99 KMMRNLLCVNVSLGGNEFCLMTSHLESTREH--SAERIRQLKTVLGKMQE-----------APDSTTVIFAGDTNLRD-- 163 (256)
T ss_dssp SSCCEEEEEEEEETTEEEEEEECBCCCSGGG--HHHHHHHHHHHHHHHHH-----------SCTTSEEEEEEECCCCH--
T ss_pred CCCCEEEEEEEEECCEEEEEEEECCCCCCCC--HHHHHHHHHHHHHHHHH-----------CCCCCEEEEECCCCCCC--
T ss_conf 5562599999986997999996046644441--35566788777656652-----------36764699937269996--
Q ss_pred CHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCEEECCC
Q ss_conf 947899999521646774333536987519865576657856699865336886666889988888974-3443421178
Q 006495 494 PYEKTRELISKKQWSKLAESDQLLRELRKGRAFDGWSEGTLIFAPTYKYELNSEKYYGEDPKVGRRNPS-WCDRILSYGK 572 (643)
Q Consensus 494 ~~~~v~~lI~~~~~~~LLe~DQL~~e~~~g~~F~gf~Eg~I~FpPTYKy~~~Sd~Y~~~~~~~kkR~PA-WCDRIL~~g~ 572 (643)
.+..........+ ...|.+..-...++|.+......+.. ..+.|. ..|+||+.+.
T Consensus 164 -~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~riD~I~~~~~ 219 (256)
T 4gz1_A 164 -QEVIKCGGLPDNV------------------FDAWEFLGKPKHCQYTWDTKANNNLR-----IPAAYKHRFDRIFFRAE 219 (256)
T ss_dssp -HHHHHHTCSCTTE------------------EEHHHHTTCCGGGSCSEETTTCCTTC-----CSSCCEECCEEEEEECC
T ss_pred -CHHHHHHHCCCHH------------------HHHHHHHCCCCCCCCCCCCCCCCCCC-----CCCCCCCCEEEEEEECC
T ss_conf -0333321000001------------------45899836877787543567777655-----68899963789999787
Q ss_pred --CEEEEEEC-----C--CCCCCCCCCCCEEEEEE
Q ss_conf --70797650-----3--55788999781107997
Q 006495 573 --GMRLLNYR-----R--NEIKMSDHRPVTATYMA 598 (643)
Q Consensus 573 --gi~~l~Y~-----s--~e~~~SDHRPV~A~F~v 598 (643)
.+....+. . .....|||.||.|.|.+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~SDH~pv~a~~~i 254 (256)
T 4gz1_A 220 EGHLIPQSLDLVGLEKLDCGRFPSDHWGLLCTLNV 254 (256)
T ss_dssp -CSEEEEEEEEECCSCCTTSSCSCSBCEEEEEEEE
T ss_pred CCCEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEE
T ss_conf 36655669999721225789998843058999999
No 8
>4fva_A 5'-tyrosyl-DNA phosphodiesterase; 5'-phosphotyrosyl-DNA diesterase, hydrolase; HET: EDO; 2.07A {Caenorhabditis elegans}
Probab=1.00 E-value=1 Score=71.97 Aligned_cols=142 Identities=20% Similarity=0.155 Sum_probs=74.7
Q ss_pred CCEEEEEEEEEECCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCC
Q ss_conf 55029999999879688998333899999966789854099998734878887889986447753289957667544699
Q 006495 415 GNKGSVSVSMSIHQTLFCFVCAHLTSGEKDGDELKRNADVHEIHRRTHFRSHSEIGFPKSICDHERIIWLGDLNYRINLP 494 (643)
Q Consensus 415 GNKGaVsVsl~l~~tslcFVnsHLaAgek~~d~~rRN~D~~eIl~r~~F~~~~~~~~P~~I~dhD~iiwlGDLNYRI~l~ 494 (643)
..++.+.+.+.+.+..|.++|+||.+.... ...|..++..++....... .......+|++||||.+-...
T Consensus 104 ~~~~~~~~~~~~~g~~~~v~~~Hl~~~~~~--~~~~~~q~~~~~~~~~~~~--------~~~~~~~vIl~GDfN~~~~~~ 173 (256)
T 4fva_A 104 MYRTLQILEGSIGGLKVFLLNTHLESTREH--RPQRCAQFGFCMDKVREII--------AQNPGALVFFGGDLNLRDEEV 173 (256)
T ss_dssp SCCEEEEEEEEETTEEEEEEEEECCCSGGG--HHHHHHHHHHHHHHHHHHH--------HHSTTCEEEEEEECCCCGGGC
T ss_pred CCCEEEEEEEEECCEEEEEEEECCCCCCCC--HHHHHHHHHHHHHHHHHHH--------HCCCCCCEEEECCCCCCCCHH
T ss_conf 544268999974992899999657888730--6779999999998766666--------426887589966688885302
Q ss_pred HHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCEEECC
Q ss_conf 47899999521646774333536987519865576657--8566998653368866668899888889743-44342117
Q 006495 495 YEKTRELISKKQWSKLAESDQLLRELRKGRAFDGWSEG--TLIFAPTYKYELNSEKYYGEDPKVGRRNPSW-CDRILSYG 571 (643)
Q Consensus 495 ~~~v~~lI~~~~~~~LLe~DQL~~e~~~g~~F~gf~Eg--~I~FpPTYKy~~~Sd~Y~~~~~~~kkR~PAW-CDRIL~~g 571 (643)
... ...+ .| .|.+. +-....||-...+... ...+.|.+ .|+||+.+
T Consensus 174 ~~~------~~~~-----~d-------------~~~~~~~~~~~~~T~~~~~~~~~-------~~~~~~~~RiD~I~~~~ 222 (256)
T 4fva_A 174 SRV------PDGV-----KD-------------AWEAAGSDNKTKFTWDTFKNDNK-------QGFHGAKMRFDRLYWSG 222 (256)
T ss_dssp CCC------CTTC-----EE-------------HHHHTTCCGGGCCSEETTTCCSS-------CSCCSCEECCEEEEEES
T ss_pred HHH------HCCH-----HH-------------HHHHHCCCCCCCCCCCCCCCCCC-------CCCCCCCCCEEEEEECC
T ss_conf 333------1230-----46-------------89973789778846566467554-------66789881757899749
Q ss_pred CCEEEEEEC-----C---CCCCCCCCCCCEEEEEE
Q ss_conf 870797650-----3---55788999781107997
Q 006495 572 KGMRLLNYR-----R---NEIKMSDHRPVTATYMA 598 (643)
Q Consensus 572 ~gi~~l~Y~-----s---~e~~~SDHRPV~A~F~v 598 (643)
. ++...+. + .....|||.||.|.|++
T Consensus 223 ~-~~~~~~~~~~~~~~~~~~~~~SDH~pv~a~Fsa 256 (256)
T 4fva_A 223 P-LDKVKFTLEGRQRIRSCLCFPSDHWAINATFFA 256 (256)
T ss_dssp S-CCEEEEEEECCSCCTTTCSCSCSSCEEEEEEEC
T ss_pred C-CEEEEEEEEEEEECCCCCCCCCCCCCEEEEECC
T ss_conf 9-504689998667547899996753298999859
No 9
>3teb_A Endonuclease/exonuclease/phosphatase; PSI-biology, MCSG, midwest center for structural genomics; 2.99A {Leptotrichia buccalis c-1013-b}
Probab=1.00 E-value=1 Score=71.71 Aligned_cols=141 Identities=15% Similarity=0.139 Sum_probs=79.3
Q ss_pred CCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCC
Q ss_conf 35502999999987968899833389999996678985409999873487888788998644775328995766754469
Q 006495 414 IGNKGSVSVSMSIHQTLFCFVCAHLTSGEKDGDELKRNADVHEIHRRTHFRSHSEIGFPKSICDHERIIWLGDLNYRINL 493 (643)
Q Consensus 414 lGNKGaVsVsl~l~~tslcFVnsHLaAgek~~d~~rRN~D~~eIl~r~~F~~~~~~~~P~~I~dhD~iiwlGDLNYRI~l 493 (643)
+..++++.+.+.+.+..|+++|+||.+..... ..|..++..|++.+. ....+|++||||..-..
T Consensus 120 ~~~r~~~~~~~~~~~~~~~v~~~Hl~~~~~~~--~~r~~q~~~l~~~~~--------------~~~~~il~GDfN~~~~~ 183 (266)
T 3teb_A 120 ISARRIVSITINYEGQDIEFYSCHMNLPNCET--EDMGKNIQTILNRTQ--------------NSNLKILMGDFNTDAIG 183 (266)
T ss_dssp TTCCEEEEEEEEETTEEEEEEEEECCCTTCTT--CCHHHHHHHHHTSSC--------------SCCEEEEEEECCCCTTT
T ss_pred CCCCEEEEEEEEECCEEEEEEEECCCCCCCCH--HHHHHHHHHHHHHHH--------------CCCCEEEEEECCCCCCC
T ss_conf 35634899999759969999994688766776--999999999999885--------------39967998078999878
Q ss_pred CHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCC
Q ss_conf 94789999952164677433353698751986557665785-66998653368866668899888889743443421178
Q 006495 494 PYEKTRELISKKQWSKLAESDQLLRELRKGRAFDGWSEGTL-IFAPTYKYELNSEKYYGEDPKVGRRNPSWCDRILSYGK 572 (643)
Q Consensus 494 ~~~~v~~lI~~~~~~~LLe~DQL~~e~~~g~~F~gf~Eg~I-~FpPTYKy~~~Sd~Y~~~~~~~kkR~PAWCDRIL~~g~ 572 (643)
.......++..+ +. ..|.+... ...+||.+.. ..|. ......-.|+||..+
T Consensus 184 ~~~~~~~l~~~~-l~------------------d~~~~~~~~~~~~t~~~~~--~~~~------~~~~~~riD~i~~s~- 235 (266)
T 3teb_A 184 NVAAYENILSQG-LF------------------DTYVMAEKKDDGITVDKSI--HGWD------NDKAKKRLDYIFSNK- 235 (266)
T ss_dssp CHHHHHHHHTTT-CE------------------EHHHHCSEECCCCCEECC--------------CTTEECCEEEEESS-
T ss_pred CCCHHHHHCCCC-CC------------------CHHHHHCCCCCCCCCCCCC--CCCC------CCCCCCEEEEEEECC-
T ss_conf 970887632466-40------------------1487624235786446756--8767------677677067999689-
Q ss_pred CEEEEEECCC-----CCCCCCCCCCEEEEEE
Q ss_conf 7079765035-----5788999781107997
Q 006495 573 GMRLLNYRRN-----EIKMSDHRPVTATYMA 598 (643)
Q Consensus 573 gi~~l~Y~s~-----e~~~SDHRPV~A~F~v 598 (643)
++....+... ....|||.||.+.|.+
T Consensus 236 ~~~~~~~~v~~~~~~~~~~SDH~Pv~~~l~l 266 (266)
T 3teb_A 236 ELKVKESKVIFNNKNKEIVSDHFGIEVKIEF 266 (266)
T ss_dssp CCCEEEEEEESSSSSSCCCSSSCEEEEEECC
T ss_pred CEEEEEEEEEECCCCCCCCCCCCCEEEEEEC
T ss_conf 8279998997678899874886688999979
No 10
>1zwx_A SMCL, sphingomyelinase-C; dnase1-like fold, beta-hairpin, hydrolase; 1.90A {Listeria ivanovii} SCOP: d.151.1.3
Probab=1.00 E-value=1 Score=70.78 Aligned_cols=147 Identities=20% Similarity=0.232 Sum_probs=81.4
Q ss_pred CCCEEEEEEEEEECCEEEEEEEECCCCCCCC----CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCC
Q ss_conf 3550299999998796889983338999999----667898540999987348788878899864477532899576675
Q 006495 414 IGNKGSVSVSMSIHQTLFCFVCAHLTSGEKD----GDELKRNADVHEIHRRTHFRSHSEIGFPKSICDHERIIWLGDLNY 489 (643)
Q Consensus 414 lGNKGaVsVsl~l~~tslcFVnsHLaAgek~----~d~~rRN~D~~eIl~r~~F~~~~~~~~P~~I~dhD~iiwlGDLNY 489 (643)
..++|++.+.+.+.+..|.++|+||.+.... .....|..++..|.+.+.-. . +.....+|++||||-
T Consensus 128 ~~~r~~~~~~~~~~g~~~~v~~~Hl~~~~~~~~~~~~~~~R~~q~~~l~~~i~~~-----~----~~~~~pvIl~GDfN~ 198 (301)
T 1zwx_A 128 LSNKGFAYVKIMKNGKPYHIIGTHTQADDSLISKDTSRAIRAEQMQEIQTFIAKK-----N----IPKDEIIFIGGDLNV 198 (301)
T ss_dssp GBCCEEEEEEEEETTEEEEEEEEECCCCCTTSCHHHHHHHHHHHHHHHHHHHHHH-----T----CCTTSEEEEEEECCC
T ss_pred CCCCCEEEEEEEECCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH-----C----CCCCCEEEEEEECCC
T ss_conf 1477869999998997999999647889878876405899999999999999970-----7----798986999952899
Q ss_pred CCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCC
Q ss_conf 446994789999952164677433353698751986557665785669986533688---66668899888889743443
Q 006495 490 RINLPYEKTRELISKKQWSKLAESDQLLRELRKGRAFDGWSEGTLIFAPTYKYELNS---EKYYGEDPKVGRRNPSWCDR 566 (643)
Q Consensus 490 RI~l~~~~v~~lI~~~~~~~LLe~DQL~~e~~~g~~F~gf~Eg~I~FpPTYKy~~~S---d~Y~~~~~~~kkR~PAWCDR 566 (643)
.-.. .. +..|+. ..... .-..|.. .++||-+..|. ..|. . ......|+
T Consensus 199 ~~~~---~~--------~~~l~~------~~~~~-~~d~~~g----~~~T~~~~~n~~~~~t~~------~-~~~~rID~ 249 (301)
T 1zwx_A 199 NYGT---DE--------YHDMLK------LLNVS-SPANFNG----QMATWDPTTNSMLKESYP------K-AAPEYLDY 249 (301)
T ss_dssp CTTS---HH--------HHHHHH------HHTBC-CCTTCCT----TSCSBCTTTCHHHHHHCT------T-SCCBCCEE
T ss_pred CCCC---HH--------HHHHHH------HCCCC-CCCCCCC----CCCEECCCCCCCCCCCCC------C-CCCCEEEE
T ss_conf 9986---89--------999999------71888-8754468----872378765742224579------9-98422769
Q ss_pred EEECCCC-----------------EEEEEECCC--CCCCCCCCCCEEEEEE
Q ss_conf 4211787-----------------079765035--5788999781107997
Q 006495 567 ILSYGKG-----------------MRLLNYRRN--EIKMSDHRPVTATYMA 598 (643)
Q Consensus 567 IL~~g~g-----------------i~~l~Y~s~--e~~~SDHRPV~A~F~v 598 (643)
||+.+.. +....|... ....|||.||.+.|.+
T Consensus 250 I~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~SDH~Pv~a~l~~ 300 (301)
T 1zwx_A 250 IFVENGHARPHSWHNKVLHTKSPQWSVKSWFKTYTYQDFSDHYPVVGFTDN 300 (301)
T ss_dssp EEEBTTSCCCSCEEEEECCCCCCCEEEEETTEEEEECCSSSSCCEEEEEC-
T ss_pred EEEECCCCCCCCCCCEEECCCCCCCEEECCCCCCCCCCCCCCCCEEEEEEC
T ss_conf 987578778650213244145665044125688642577787637899836
Done!