Query 006496
Match_columns 643
No_of_seqs 226 out of 2974
Neff 8.6
Searched_HMMs 29240
Date Tue Mar 26 19:18:40 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/006496.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_2121-2125//hhsearch_pdb/006496hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4f4c_A Multidrug resistance pr 1.0 1 1 911.3 56.7 578 57-639 58-654 (1321)
2 4f4c_A Multidrug resistance pr 1.0 1 1 905.2 75.2 582 58-643 737-1321(1321)
3 3g5u_A MCG1178, multidrug resi 1.0 1 1 813.6 61.2 575 61-640 35-627 (1284)
4 3g5u_A MCG1178, multidrug resi 1.0 1 1 779.6 58.5 581 60-642 692-1274(1284)
5 3qf4_B Uncharacterized ABC tra 1.0 1 1 763.8 65.4 571 58-640 22-592 (598)
6 3qf4_A ABC transporter, ATP-bi 1.0 1 1 763.2 69.9 568 63-640 13-580 (587)
7 4a82_A Cystic fibrosis transme 1.0 1 1 758.9 68.0 572 61-639 2-577 (578)
8 2yl4_A ATP-binding cassette SU 1.0 1 1 740.6 75.2 578 60-641 6-586 (595)
9 3b5x_A Lipid A export ATP-bind 1.0 1 1 737.6 78.2 571 59-640 11-581 (582)
10 3b60_A Lipid A export ATP-bind 1.0 1 1 736.5 74.4 571 59-640 11-581 (582)
No 1
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=1.00 E-value=1 Score=911.33 Aligned_cols=578 Identities=36% Similarity=0.579 Sum_probs=523.8
Q ss_pred CHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC------------------HHHHHHHHHH
Q ss_conf 8089999989834-55899999999999999899899999999999950258------------------0468752789
Q 006496 57 TAPSFRRLLALNI-PEWKQASLGCLSAVLFGAVQPVYAFAMGSMISVYFLKD------------------HDEIKEKTRF 117 (643)
Q Consensus 57 ~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~ 117 (643)
+..++.++++++. .++..++++.+++++.++..|++++++|.+++.+.... .....+....
T Consensus 58 ~~v~~~~Lfrya~~~d~~l~~~g~~~a~~~G~~~p~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (1321)
T 4f4c_A 58 NKVSIPQLYRYTTTLEKLLLFIGTLVAVITGAGLPLMSILQGKVSQAFINEQIVINNNGSTFLPTGQNYTKTDFEHDVMN 137 (1321)
T ss_dssp SCCCHHHHTTTCCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHTTSCBCSSTTCBCCHHHHHHHHHH
T ss_pred CCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 87799997315676789999999999999999999999999999999970100014543000344310016899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999971995332237769458999999779999999999899
Q 006496 118 YSLCFFGLSIFSLLTNVCQQYYFAYMGEYLTKRIRENMLSKILTFEVGWFDQDENSSGAICSRLAKDANVVRSLVGDRVA 197 (643)
Q Consensus 118 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~~~~f~~~~~~~G~i~~r~s~D~~~i~~~~~~~~~ 197 (643)
+++.+++++++..++.+++.+++.++++++..++|.++|+|++++|++||+ ++++|++++|+++|++.+++++...+.
T Consensus 138 ~~~~~~~l~i~~~~~~~~~~~~~~~~~~r~~~~lR~~~~~~ll~~~~~~fd--~~~~G~l~sr~~~D~~~i~~~~~~~l~ 215 (1321)
T 4f4c_A 138 VVWSYAAMTVGMWAAGQITVTCYLYVAEQMNNRLRREFVKSILRQEISWFD--TNHSGTLATKLFDNLERVKEGTGDKIG 215 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHH--HTCCTTHHHHHHHHHHHHHHTSSHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHC--CCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999999999999999999999999999788989987--998489999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHH
Q ss_conf 99989999999999999996889999999999999999999999999999999999999999999981199999963089
Q 006496 198 LLVQTFSSITIAFTMSLIISWRLALVIIAVQPLVIVCLYGKEVLLKSMSKKVIKAQDESSKLAAEAVSNLRTINAFSSQE 277 (643)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~ 277 (643)
.++..+..++++++++++++|.+++++++++|+++++.....+...+..++.++..++..+.+.|.++|+++||+|++|+
T Consensus 216 ~~~~~~~~~i~~~i~~~~~~~~l~lv~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~ 295 (1321)
T 4f4c_A 216 MAFQYLSQFITGFIVAFTHSWQLTLVMLAVTPIQALCGFAIAKSMSTFAIRETLRYAKAGKVVEETISSIRTVVSLNGLR 295 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHCHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
T ss_conf 99999999999999999998999999999999999999999999999999999999999999999998399999821429
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999999999998718779888999999999999999999999
Q 006496 278 RIQKMLKKAHEAPRREGVRQSWIAGICLAFSRALVSCVVALAFWYGGRLVGRGYIDGKSLFEIFLILVSTGKVIADAGTM 357 (643)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~g~l~~~~~~~~~~~~~~~~l~~~ 357 (643)
.+.++|.+..++..+...+.....++..+...++..+.+++++++|.+++..|.+++|.+++++.++..+..|+..+...
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~~~~~ 375 (1321)
T 4f4c_A 296 YELERYSTAVEEAKKAGVLKGLFLGISFGAMQASNFISFALAFYIGVGWVHDGSLNFGDMLTTFSSVMMGSMALGLAGPQ 375 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999999999959986999999999999999999989999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEEEEECCCEEEEECCCCC
Q ss_conf 99999999999999998725767798999999998755658999589988999984320001599848958999869999
Q 006496 358 TTDIAKGSDAVASVFAVLDRHTKIDPDDLNGYQPEKIIGHIELEDVHFAYPARPNVMIFKGFSINIEAKKSTALVGQSGS 437 (643)
Q Consensus 358 ~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~~vsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~sGs 437 (643)
+..+..+..++.|++++++.+++.+........+....|.|+|+||+|+||++++.++|+|+||+|++|+++||||||||
T Consensus 376 ~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~I~~~nvsF~Y~~~~~~~vL~~isl~i~~G~~vaivG~sGs 455 (1321)
T 4f4c_A 376 LAVLGTAQGAASGIYEVLDRKPVIDSSSKAGRKDMKIKGDITVENVHFTYPSRPDVPILRGMNLRVNAGQTVALVGSSGC 455 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHTTTSCCSSCSSSCCCCCCCCCCCEEEEEEEECCSSSTTSCSEEEEEEEECTTCEEEEEECSSS
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEECEEEEECCCCEEEEEECCCC
T ss_conf 99999999999999999717853456665565677888767999855407999987433331886228827899805898
Q ss_pred CHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHCCCEEEECCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHCCH
Q ss_conf 87889999851578997479899960899998887323078805888870028999715999999989999999980308
Q 006496 438 GKSTIIGLIERFYDPLKGVVKIDGRDIRSHHLRSLRRHIALVSQEPALFAGTIRENITYGASDKIDESEIIEAGKAANAH 517 (643)
Q Consensus 438 GKSTL~~lL~gl~~~~~G~I~idG~di~~~~~~~lR~~i~~v~Q~p~lf~gTIreNi~~g~~~~~~de~i~~al~~~~l~ 517 (643)
|||||+++|+|+|+|++|+|.+||+|+++++.++||++|+||||+||||+|||||||++|. +++++|++++||+.|+++
T Consensus 456 GKSTll~ll~~~~~~~~G~I~idG~~i~~~~~~~lr~~i~~v~Q~~~Lf~~TI~eNI~~g~-~~~~~~~v~~a~~~a~l~ 534 (1321)
T 4f4c_A 456 GKSTIISLLLRYYDVLKGKITIDGVDVRDINLEFLRKNVAVVSQEPALFNCTIEENISLGK-EGITREEMVAACKMANAE 534 (1321)
T ss_dssp CHHHHHHHHTTSSCCSEEEEEETTEETTTSCHHHHHHHEEEECSSCCCCSEEHHHHHHTTC-TTCCHHHHHHHHHHTTCH
T ss_pred CHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCHHHHHHCCCCCCCCCEEECCCHHHHHHHHC-CCCHHHHHHHHHHHCCCH
T ss_conf 5778888754565164486157996501125999850466658753320786167886415-522099999999875654
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCC
Q ss_conf 89982001555412799998894699999999998159987886355789998989999999998717963999805921
Q 006496 518 DFIAGLYEGYDTWCGDRGLQLSGGQKQRIAIARAVLKNPAVLLLDEATSALDSQSEKVVQEALERLMVERTSVVVAHRLS 597 (643)
Q Consensus 518 ~~I~~lp~Gl~t~ige~G~~LSGGQkQRiaLARAll~~~~IliLDE~TSalD~~te~~i~~~i~~~~~~~TvI~ItHrl~ 597 (643)
+||+.||+||||.|||+|.+||||||||||||||+|++|+||||||||||||++||+.++++|++..++||+|+||||++
T Consensus 535 ~~i~~lp~G~~T~vGe~G~~LSGGQkQRiaiARAl~~~~~IliLDE~tSaLD~~te~~i~~~l~~~~~~~T~iiiaHrls 614 (1321)
T 4f4c_A 535 KFIKTLPNGYNTLVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESEGIVQQALDKAAKGRTTIIIAHRLS 614 (1321)
T ss_dssp HHHHHSTTTTSSEESSSSCCCCHHHHHHHHHHHHHTTCCSEEEEESTTTTSCTTTHHHHHHHHHHHHTTSEEEEECSCTT
T ss_pred HHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCHH
T ss_conf 68870888886075589887777787999999987259998998455446887899999999999847988999736387
Q ss_pred HHHHCCEEEEEECCEEEEECCHHHHHHCCCCCHHHHHHHHHC
Q ss_conf 465139789996997989728247850399907899997211
Q 006496 598 TIQNCDIIAVLEQGRVVEEGSHQSLLAKGPAGAYYSLVSLQT 639 (643)
Q Consensus 598 ~i~~~D~Iivl~~G~ive~G~~~~Ll~~~~~~~~~~l~~~~~ 639 (643)
++++||+|+||++|+|+|+|+|+||++ ++|.|++|++.|.
T Consensus 615 ~i~~aD~Iivl~~G~ive~Gth~eL~~--~~g~y~~l~~~q~ 654 (1321)
T 4f4c_A 615 TIRNADLIISCKNGQVVEVGDHRALMA--QQGLYYDLVTAQT 654 (1321)
T ss_dssp TTTTCSEEEEEETTEEEEEECHHHHHT--TTCHHHHHHHHHH
T ss_pred HHHHCCEEEEEECCEEECCCCHHHHHH--HHHHHHHHHHHHH
T ss_conf 898689899963996513689999998--5327999999622
No 2
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=1.00 E-value=1 Score=905.19 Aligned_cols=582 Identities=34% Similarity=0.573 Sum_probs=506.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 08999998983455899999999999999899899999999999950258046875278999999999999999999999
Q 006496 58 APSFRRLLALNIPEWKQASLGCLSAVLFGAVQPVYAFAMGSMISVYFLKDHDEIKEKTRFYSLCFFGLSIFSLLTNVCQQ 137 (643)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 137 (643)
...+++++...+++|..+.++.++..+.+.+.+.++++++.+++.+.... ........+|++++++++++..++.++..
T Consensus 737 ~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~i~~~~~~ 815 (1321)
T 4f4c_A 737 KTNLFEILYHARPHALSLFIGMSTATIGGFIYPTYSVFFTSFMNVFAGNP-ADFLSQGHFWALMFLVLAAAQGICSFLMT 815 (1321)
T ss_dssp CCCHHHHHHHTGGGHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHTSSCS-STTTTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 31099999998778999999999999999999999999999998751793-45566789999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999997199533223776945899999977999999999989999989999999999999996
Q 006496 138 YYFAYMGEYLTKRIRENMLSKILTFEVGWFDQDENSSGAICSRLAKDANVVRSLVGDRVALLVQTFSSITIAFTMSLIIS 217 (643)
Q Consensus 138 ~~~~~~~~~~~~~lr~~l~~~il~~~~~~f~~~~~~~G~i~~r~s~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (643)
+++...+.++..++|.++|++++++|++||+..++++|+++||+++|++.+++.+...+..++..++.++++++++++++
T Consensus 816 ~~~~~~~~~~~~~lr~~l~~~il~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~l~~~l~~~~~~~~~~i~~~~~~~~~~ 895 (1321)
T 4f4c_A 816 FFMGIASESLTRDLRNKLFRNVLSQHIGFFDSPQNASGKISTRLATDVPNLRTAIDFRFSTVITTLVSMVAGIGLAFFYG 895 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSCSSSTTSGGGCHHHHHHHHHTHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHH
T ss_conf 99999999999999999988873499333216788848888502505999999999999999998653777702213786
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 88999999999999999999999999999999999999999999998119999996308999999999999999999999
Q 006496 218 WRLALVIIAVQPLVIVCLYGKEVLLKSMSKKVIKAQDESSKLAAEAVSNLRTINAFSSQERIQKMLKKAHEAPRREGVRQ 297 (643)
Q Consensus 218 ~~~~~v~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~ 297 (643)
|.+++++++++|++++..+.+.+.......+..+..++....+.|+++|+++||+|++|+++.+++.+..+...+...+.
T Consensus 896 ~~l~lv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~ 975 (1321)
T 4f4c_A 896 WQMALLIIAILPIVAFGQYLRGRRFTGKNVKSASEFADSGKIAIEAIENVRTVQALAREDTFYENFCEKLDIPHKEAIKE 975 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSCCSSCSTTTSSHHHHHHHHHHHHHHTHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 89999999988899999999999999999999999888988999999627988861414889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999871877988--8999999999999999999999999999999999999987
Q 006496 298 SWIAGICLAFSRALVSCVVALAFWYGGRLVGRGYIDGK--SLFEIFLILVSTGKVIADAGTMTTDIAKGSDAVASVFAVL 375 (643)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~g--~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~~ 375 (643)
.+...+...+...+..+..++++++|..++..+..+.+ .++.++..+.....++..+...+..+..+..+..|+++++
T Consensus 976 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l 1055 (1321)
T 4f4c_A 976 AFIQGLSYGCASSVLYLLNTCAYRMGLALIITDPPTMQPMRVLRVMYAITISTSTLGFATSYFPEYAKATFAGGIIFGML 1055 (1321)
T ss_dssp HHHHHHHHHHHTTHHHHHHHHHHHHHHHTTSSSSCSSCHHHHHHHHHHHHTTTSSTTGGGGHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999875788753765421478999999998778899999999999999999999899986
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCC
Q ss_conf 25767798999999998755658999589988999984320001599848958999869999878899998515789974
Q 006496 376 DRHTKIDPDDLNGYQPEKIIGHIELEDVHFAYPARPNVMIFKGFSINIEAKKSTALVGQSGSGKSTIIGLIERFYDPLKG 455 (643)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~I~~~~vsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTL~~lL~gl~~~~~G 455 (643)
+.+++.+..... ..+.+..|.|+|+||+|+||++++.+||+|+||+|+|||+||||||||||||||+++|+|+|+|++|
T Consensus 1056 ~~~~~~~~~~~~-~~~~~~~g~I~f~nVsf~Y~~~~~~~VL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G 1134 (1321)
T 4f4c_A 1056 RKISKIDSLSLA-GEKKKLYGKVIFKNVRFAYPERPEIEILKGLSFSVEPGQTLALVGPSGCGKSTVVALLERFYDTLGG 1134 (1321)
T ss_dssp HCCCSSCTTCCC-SBCCCCCCCEEEEEEEECCTTSCSSCSEEEEEEEECTTCEEEEECSTTSSTTSHHHHHTTSSCCSSS
T ss_pred HCCCCCCCCCCC-CCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCC
T ss_conf 076657776677-8788888818999879857999988212451699889899999899998199999999568638997
Q ss_pred EEEECCEECCCCCHHHHHCCCEEEECCCCCCCCCHHHHHHCCC-CCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCC
Q ss_conf 7989996089999888732307880588887002899971599-999998999999998030889982001555412799
Q 006496 456 VVKIDGRDIRSHHLRSLRRHIALVSQEPALFAGTIRENITYGA-SDKIDESEIIEAGKAANAHDFIAGLYEGYDTWCGDR 534 (643)
Q Consensus 456 ~I~idG~di~~~~~~~lR~~i~~v~Q~p~lf~gTIreNi~~g~-~~~~~de~i~~al~~~~l~~~I~~lp~Gl~t~ige~ 534 (643)
+|.|||+|++++++++||+++++|||||+||+|||||||++|. +++++|+++|+||+.|++++||++||+||||.|||+
T Consensus 1135 ~I~iDG~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNI~~gld~~~~sd~ei~~Al~~a~l~~~I~~Lp~GldT~vge~ 1214 (1321)
T 4f4c_A 1135 EIFIDGSEIKTLNPEHTRSQIAIVSQEPTLFDCSIAENIIYGLDPSSVTMAQVEEAARLANIHNFIAELPEGFETRVGDR 1214 (1321)
T ss_dssp EEEETTEETTTBCHHHHHTTEEEECSSCCCCSEEHHHHHSSSSCTTTSCHHHHHHHHHHTTCHHHHHTSTTTTCSEETTT
T ss_pred EEEECCEEHHHCCHHHHHHHEEEECCCCEEECCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCEECCC
T ss_conf 89999998654999999854599878997327239999745499999999999999998298499971767899982388
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHCCEEEEEECCEEE
Q ss_conf 99889469999999999815998788635578999898999999999871796399980592146513978999699798
Q 006496 535 GLQLSGGQKQRIAIARAVLKNPAVLLLDEATSALDSQSEKVVQEALERLMVERTSVVVAHRLSTIQNCDIIAVLEQGRVV 614 (643)
Q Consensus 535 G~~LSGGQkQRiaLARAll~~~~IliLDE~TSalD~~te~~i~~~i~~~~~~~TvI~ItHrl~~i~~~D~Iivl~~G~iv 614 (643)
|.+||||||||||||||++|+|+||||||||||||++||+.|+++|++.+++||+|+||||++|+++||+|+|||+|+|+
T Consensus 1215 G~~LSgGQrQriaiARAllr~~~ILiLDEaTSaLD~~tE~~Iq~~l~~~~~~~TvI~IAHRLsTi~~aD~I~Vld~G~Iv 1294 (1321)
T 4f4c_A 1215 GTQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEKVVQEALDRAREGRTCIVIAHRLNTVMNADCIAVVSNGTII 1294 (1321)
T ss_dssp SCSSCHHHHHHHHHHHHHHSCCSEEEEESCCCSTTSHHHHHHHHHHTTTSSSSEEEEECSSSSTTTTCSEEEEESSSSEE
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCEEEEEECCEEE
T ss_conf 91569999999999999971799899968111578999999999999973999899960689999969999999898999
Q ss_pred EECCHHHHHHCCCCCHHHHHHHHHCCCCC
Q ss_conf 97282478503999078999972118999
Q 006496 615 EEGSHQSLLAKGPAGAYYSLVSLQTTPQN 643 (643)
Q Consensus 615 e~G~~~~Ll~~~~~~~~~~l~~~~~~~~~ 643 (643)
|+|+|+||++ ++|.|++||+.|...+.
T Consensus 1295 E~Gth~eLl~--~~g~y~~L~~~Q~~e~e 1321 (1321)
T 4f4c_A 1295 EKGTHTQLMS--EKGAYYKLTQKQMTEKK 1321 (1321)
T ss_dssp EEECHHHHHH--CC---------------
T ss_pred EECCHHHHHH--CCCHHHHHHHHHHHCCC
T ss_conf 9888899984--98099999999985059
No 3
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=1.00 E-value=1 Score=813.64 Aligned_cols=575 Identities=35% Similarity=0.599 Sum_probs=515.4
Q ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH-----------------HHHHHHHHHHHHHH
Q ss_conf 99998983-4558999999999999998998999999999999502580-----------------46875278999999
Q 006496 61 FRRLLALN-IPEWKQASLGCLSAVLFGAVQPVYAFAMGSMISVYFLKDH-----------------DEIKEKTRFYSLCF 122 (643)
Q Consensus 61 ~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~ 122 (643)
+.+++.+. +.+|..++++.++.++.+++.+..+++++.+++.+..... .........+++++
T Consensus 35 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (1284)
T 3g5u_A 35 VLTMFRYAGWLDRLYMLVGTLAAIIHGVALPLMMLIFGDMTDSFASVGNVSKNSTNMSEADKRAMFAKLEEEMTTYAYYY 114 (1284)
T ss_dssp THHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 99999872657999999999999999999999999999999998613444332222221111100244688999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999997199533223776945899999977999999999989999989
Q 006496 123 FGLSIFSLLTNVCQQYYFAYMGEYLTKRIRENMLSKILTFEVGWFDQDENSSGAICSRLAKDANVVRSLVGDRVALLVQT 202 (643)
Q Consensus 123 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~~~~f~~~~~~~G~i~~r~s~D~~~i~~~~~~~~~~~~~~ 202 (643)
++++++..++.+++.+++...+.+...++|.++|++++++|++||+ ++++|++++|+++|++.+++.+...+..++..
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~f~--~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~ 192 (1284)
T 3g5u_A 115 TGIGAGVLIVAYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFD--VHDVGELNTRLTDDVSKINEGIGDKIGMFFQA 192 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTHHHH--SCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999999999999999999869989975--68877899999988999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHH
Q ss_conf 99999999999999688999999999999999999999999999999999999999999998119999996308999999
Q 006496 203 FSSITIAFTMSLIISWRLALVIIAVQPLVIVCLYGKEVLLKSMSKKVIKAQDESSKLAAEAVSNLRTINAFSSQERIQKM 282 (643)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~v~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~ 282 (643)
++.+++++++++.++|.+++++++++|+++++...+.+...+..++.++..++....+.|+++|+++||+|++|+++.++
T Consensus 193 ~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~ikaf~~e~~~~~~ 272 (1284)
T 3g5u_A 193 MATFFGGFIIGFTRGWKLTLVILAISPVLGLSAGIWAKILSSFTDKELHAYAKAGAVAEEVLAAIRTVIAFGGQKKELER 272 (1284)
T ss_dssp HHHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHHTTCCCCSHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHH
T ss_conf 99999999999999899999999999999999999999999999999999999999999999787999984653999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999999871877988899999999999999999999999999
Q 006496 283 LKKAHEAPRREGVRQSWIAGICLAFSRALVSCVVALAFWYGGRLVGRGYIDGKSLFEIFLILVSTGKVIADAGTMTTDIA 362 (643)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~g~l~~~~~~~~~~~~~~~~l~~~~~~~~ 362 (643)
|.+..++..+...+..+......++..++..+..++++|+|++++..|.++.|.+++++.++.....++..+...+..+.
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (1284)
T 3g5u_A 273 YNNNLEEAKRLGIKKAITANISMGAAFLLIYASYALAFWYGTSLVISKEYSIGQVLTVFFSVLIGAFSVGQASPNIEAFA 352 (1284)
T ss_dssp HHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999992998899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEEEEECCCEEEEECCCCCCHHHH
Q ss_conf 99999999999872576779899999999875565899958998899998432000159984895899986999987889
Q 006496 363 KGSDAVASVFAVLDRHTKIDPDDLNGYQPEKIIGHIELEDVHFAYPARPNVMIFKGFSINIEAKKSTALVGQSGSGKSTI 442 (643)
Q Consensus 363 ~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~~vsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTL 442 (643)
.+..++.|++++++.+++.++.......++...|.|+|+||+|+|+++++.++|+|+||++++||++|||||||||||||
T Consensus 353 ~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~~~~~vL~~isl~i~~G~~~~ivG~sGsGKSTl 432 (1284)
T 3g5u_A 353 NARGAAYEVFKIIDNKPSIDSFSKSGHKPDNIQGNLEFKNIHFSYPSRKEVQILKGLNLKVKSGQTVALVGNSGCGKSTT 432 (1284)
T ss_dssp HHHHHHHHHHHTTSCCCCCSSCCSSCCCCTTCCCCEEEEEEEECCSSTTSCCSEEEEEEEECTTCEEEEECCSSSSHHHH
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEECCEEEECCCCEEEEECCCCCCHHHH
T ss_conf 99999999999972898677666567777777771899998997699998710125458975998899989999979999
Q ss_pred HHHHHCCCCCCCCEEEECCEECCCCCHHHHHCCCEEEECCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHH
Q ss_conf 99985157899747989996089999888732307880588887002899971599999998999999998030889982
Q 006496 443 IGLIERFYDPLKGVVKIDGRDIRSHHLRSLRRHIALVSQEPALFAGTIRENITYGASDKIDESEIIEAGKAANAHDFIAG 522 (643)
Q Consensus 443 ~~lL~gl~~~~~G~I~idG~di~~~~~~~lR~~i~~v~Q~p~lf~gTIreNi~~g~~~~~~de~i~~al~~~~l~~~I~~ 522 (643)
+++|+|+|+|++|+|.+||+|+++++++++|++++||||+|++|++||+|||.+|. +++++++++++++.++++++++.
T Consensus 433 ~~ll~g~~~~~~G~i~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~g~-~~~~~~~~~~~~~~~~~~~~i~~ 511 (1284)
T 3g5u_A 433 VQLMQRLYDPLDGMVSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYGR-EDVTMDEIEKAVKEANAYDFIMK 511 (1284)
T ss_dssp HHHTTTSSCCSEEEEEETTEEGGGSCHHHHHHHEEEECSSCCCCSSCHHHHHHHHC-SSCCHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHCCCCCCCEEEEECCEEHHHCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCC-CCCCHHHHHHHHHHHCCHHHHHH
T ss_conf 99980788999738999999877579999986548986887537766999974579-89999999999998296999974
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHC
Q ss_conf 00155541279999889469999999999815998788635578999898999999999871796399980592146513
Q 006496 523 LYEGYDTWCGDRGLQLSGGQKQRIAIARAVLKNPAVLLLDEATSALDSQSEKVVQEALERLMVERTSVVVAHRLSTIQNC 602 (643)
Q Consensus 523 lp~Gl~t~ige~G~~LSGGQkQRiaLARAll~~~~IliLDE~TSalD~~te~~i~~~i~~~~~~~TvI~ItHrl~~i~~~ 602 (643)
+|+|+||.+||+|.+||||||||+|||||++++|+|||||||||+||+++|+.+++.++...+++|+|+||||++++.+|
T Consensus 512 l~~g~~t~~~~~g~~LSgGq~QriaiARal~~~p~iliLDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~i~~~ 591 (1284)
T 3g5u_A 512 LPHQFDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQAALDKAREGRTTIVIAHRLSTVRNA 591 (1284)
T ss_dssp STTGGGCCCSSSSCSSCHHHHHHHHHHHHHHHCCSEEEEESTTCSSCHHHHHHHHHHHHHHHTTSEEEEECSCHHHHTTC
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCC
T ss_conf 65633450147878659999999999999952999899979877779999999999999973999899994077899749
Q ss_pred CEEEEEECCEEEEECCHHHHHHCCCCCHHHHHHHHHCC
Q ss_conf 97899969979897282478503999078999972118
Q 006496 603 DIIAVLEQGRVVEEGSHQSLLAKGPAGAYYSLVSLQTT 640 (643)
Q Consensus 603 D~Iivl~~G~ive~G~~~~Ll~~~~~~~~~~l~~~~~~ 640 (643)
|+|+||++|+|+|.|+|++|++ +++.|++++..|..
T Consensus 592 d~i~vl~~G~i~~~g~~~~l~~--~~~~~~~~~~~~~~ 627 (1284)
T 3g5u_A 592 DVIAGFDGGVIVEQGNHDELMR--EKGIYFKLVMTQTA 627 (1284)
T ss_dssp SEEEECSSSCCCCEECHHHHHH--TTSHHHHHHHHTC-
T ss_pred CEEEEEECCEEEEECCHHHHHH--CCCHHHHHHHHHHH
T ss_conf 9899998999999788999986--78779999997430
No 4
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=1.00 E-value=1 Score=779.59 Aligned_cols=581 Identities=37% Similarity=0.664 Sum_probs=515.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999989834558999999999999998998999999999999502580-468752789999999999999999999999
Q 006496 60 SFRRLLALNIPEWKQASLGCLSAVLFGAVQPVYAFAMGSMISVYFLKDH-DEIKEKTRFYSLCFFGLSIFSLLTNVCQQY 138 (643)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 138 (643)
.+++++.+.+++|+.++++.++.++.+.+.+.++++++.+++.+..... .........|.+++++++++..++.+++.+
T Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~ 771 (1284)
T 3g5u_A 692 SFWRILKLNSTEWPYFVVGIFCAIINGGLQPAFSVIFSKVVGVFTNGGPPETQRQNSNLFSLLFLILGIISFITFFLQGF 771 (1284)
T ss_dssp CTTHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 89999998451579999999999999999999999999999998556850336779999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999971995332237769458999999779999999999899999899999999999999968
Q 006496 139 YFAYMGEYLTKRIRENMLSKILTFEVGWFDQDENSSGAICSRLAKDANVVRSLVGDRVALLVQTFSSITIAFTMSLIISW 218 (643)
Q Consensus 139 ~~~~~~~~~~~~lr~~l~~~il~~~~~~f~~~~~~~G~i~~r~s~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (643)
++...+.++..++|.++|++++++|++||+..++++|++++|+++|++.++..+...+..++..+..++.++++++.++|
T Consensus 772 ~~~~~~~~~~~~lr~~l~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~~~~~i~~~~~~~ 851 (1284)
T 3g5u_A 772 TFGKAGEILTKRLRYMVFKSMLRQDVSWFDDPKNTTGALTTRLANDAAQVKGATGSRLAVIFQNIANLGTGIIISLIYGW 851 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCSHHHHSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999983998887578998899999999999999999999999999999999999999999969
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89999999999999999999999999999999999999999999981199999963089999999999999999999999
Q 006496 219 RLALVIIAVQPLVIVCLYGKEVLLKSMSKKVIKAQDESSKLAAEAVSNLRTINAFSSQERIQKMLKKAHEAPRREGVRQS 298 (643)
Q Consensus 219 ~~~~v~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~ 298 (643)
.+++++++++|+++++.+...++......+..+..+.......|+++|+++||+|++|+++.+++.+..+...+...+..
T Consensus 852 ~l~lv~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~ti~a~~~e~~~~~~~~~~~~~~~~~~~~~~ 931 (1284)
T 3g5u_A 852 QLTLLLLAIVPIIAIAGVVEMKMLSGQALKDKKELEGSGKIATEAIENFRTVVSLTREQKFETMYAQSLQIPYRNAMKKA 931 (1284)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTTTTCSSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999998899999846599999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 99999999999999999999999999998718779888999999999999999999999999999999999999987257
Q 006496 299 WIAGICLAFSRALVSCVVALAFWYGGRLVGRGYIDGKSLFEIFLILVSTGKVIADAGTMTTDIAKGSDAVASVFAVLDRH 378 (643)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~~~~~ 378 (643)
++.+....+...+..+..++++|+|++++..+.++.+.++.++.++.....++..+......+..+..+..|+.++++.+
T Consensus 932 ~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~l~~~ 1011 (1284)
T 3g5u_A 932 HVFGITFSFTQAMMYFSYAAAFRFGAYLVTQQLMTFENVLLVFSAIVFGAMAVGQVSSFAPDYAKATVSASHIIRIIEKT 1011 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSSCSCSTTHHHHHHHHHHHHHHHHHHTSSSCCSTHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999999999999999999999999999909806999999999999999999999999999999999999999998388
Q ss_pred CCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEE
Q ss_conf 67798999999998755658999589988999984320001599848958999869999878899998515789974798
Q 006496 379 TKIDPDDLNGYQPEKIIGHIELEDVHFAYPARPNVMIFKGFSINIEAKKSTALVGQSGSGKSTIIGLIERFYDPLKGVVK 458 (643)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~I~~~~vsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTL~~lL~gl~~~~~G~I~ 458 (643)
++.+........+....|.|+|+||+|+|+++++.++|+|+||+|++||++||||+||||||||+++|+|+|+|++|+|.
T Consensus 1012 ~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~~~~~~l~~vsl~i~~Ge~v~ivG~sGsGKSTl~~~l~g~~~p~~G~I~ 1091 (1284)
T 3g5u_A 1012 PEIDSYSTQGLKPNMLEGNVQFSGVVFNYPTRPSIPVLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERFYDPMAGSVF 1091 (1284)
T ss_dssp CSSSSCCSSCCCTTTTSCCEEEEEEEBCCSCGGGCCSBSSCCEEECSSSEEEEECSSSTTHHHHHHHHTTSSCCSEEEEE
T ss_pred CCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCEEECCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEE
T ss_conf 76666555665456777857999989977999987002030599769988999889999789999999468678997798
Q ss_pred ECCEECCCCCHHHHHCCCEEEECCCCCCCCCHHHHHHCCCC-CCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 99960899998887323078805888870028999715999-99998999999998030889982001555412799998
Q 006496 459 IDGRDIRSHHLRSLRRHIALVSQEPALFAGTIRENITYGAS-DKIDESEIIEAGKAANAHDFIAGLYEGYDTWCGDRGLQ 537 (643)
Q Consensus 459 idG~di~~~~~~~lR~~i~~v~Q~p~lf~gTIreNi~~g~~-~~~~de~i~~al~~~~l~~~I~~lp~Gl~t~ige~G~~ 537 (643)
+||+|+++++++++|++++||||||.+|++||+|||.++.+ ...++++++++++.++++++++.+|+||||.+||+|.+
T Consensus 1092 i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~~~~~~~~~~~~i~~~~~~~~~~~~i~~l~~gldt~vge~G~~ 1171 (1284)
T 3g5u_A 1092 LDGKEIKQLNVQWLRAQLGIVSQEPILFDCSIAENIAYGDNSRVVSYEEIVRAAKEANIHQFIDSLPDKYNTRVGDKGTQ 1171 (1284)
T ss_dssp SSSSCTTSSCHHHHTTSCEEEESSCCCCSSBHHHHHTCCCSSCCCCHHHHHHHHHHHTCHHHHSSTTTGGGCBCSTTSCS
T ss_pred ECCEECCCCCHHHHHHCEEEECCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCC
T ss_conf 99998000789999702689877874066669999746687789999999999998395999972704245611788893
Q ss_pred CCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHCCEEEEEECCEEEEEC
Q ss_conf 89469999999999815998788635578999898999999999871796399980592146513978999699798972
Q 006496 538 LSGGQKQRIAIARAVLKNPAVLLLDEATSALDSQSEKVVQEALERLMVERTSVVVAHRLSTIQNCDIIAVLEQGRVVEEG 617 (643)
Q Consensus 538 LSGGQkQRiaLARAll~~~~IliLDE~TSalD~~te~~i~~~i~~~~~~~TvI~ItHrl~~i~~~D~Iivl~~G~ive~G 617 (643)
||||||||+|||||++++|+|||||||||+||.++++.+++.|++..+++|+|+||||++++..||+|+||++|+|+|+|
T Consensus 1172 LSgGq~Qrv~iARal~~~p~iLiLDEpTs~lD~~~~~~i~~~l~~~~~~~tvi~isH~l~~i~~~dri~vl~~G~i~~~g 1251 (1284)
T 3g5u_A 1172 LSGGQKQRIAIARALVRQPHILLLDEATSALDTESEKVVQEALDKAREGRTCIVIAHRLSTIQNADLIVVIQNGKVKEHG 1251 (1284)
T ss_dssp SCHHHHHHHHHHHHHHHCCSSEEEESCSSSCCHHHHHHHHHHHHHHSSSSCEEEECSCTTGGGSCSEEEEEETBEEEEEE
T ss_pred CCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEEEC
T ss_conf 38999999999999974999999868755579999999999999867999899995587999809989999899899977
Q ss_pred CHHHHHHCCCCCHHHHHHHHHCCCC
Q ss_conf 8247850399907899997211899
Q 006496 618 SHQSLLAKGPAGAYYSLVSLQTTPQ 642 (643)
Q Consensus 618 ~~~~Ll~~~~~~~~~~l~~~~~~~~ 642 (643)
+|++|++ ++|.|++||+.|....
T Consensus 1252 ~~~~l~~--~~g~y~~l~~~q~~~~ 1274 (1284)
T 3g5u_A 1252 THQQLLA--QKGIYFSMVSVQAGAK 1274 (1284)
T ss_dssp CHHHHHH--SCSHHHHHHHHHC---
T ss_pred CHHHHHH--CCCHHHHHHHHHHHCC
T ss_conf 8999984--7777999999976132
No 5
>3qf4_B Uncharacterized ABC transporter ATP-binding prote TM_0288; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=763.83 Aligned_cols=571 Identities=28% Similarity=0.436 Sum_probs=512.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 08999998983455899999999999999899899999999999950258046875278999999999999999999999
Q 006496 58 APSFRRLLALNIPEWKQASLGCLSAVLFGAVQPVYAFAMGSMISVYFLKDHDEIKEKTRFYSLCFFGLSIFSLLTNVCQQ 137 (643)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 137 (643)
...+++++.+.+++++.+.++.++.++.+++.+..|++++.+++....... ......++++++++.++..++.+++.
T Consensus 22 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (598)
T 3qf4_B 22 TATLRRLLGYLRPHTFTLIMVFVFVTVSSILGVLSPYLIGKTIDVVFVPRR---FDLLPRYMLILGTIYALTSLLFWLQG 98 (598)
T ss_dssp HHHHHHHGGGTGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTC---GGGHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC---HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 899999999999999999999999999999999999999999999973688---89999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999997199533223776945899999977999999999989999989999999999999996
Q 006496 138 YYFAYMGEYLTKRIRENMLSKILTFEVGWFDQDENSSGAICSRLAKDANVVRSLVGDRVALLVQTFSSITIAFTMSLIIS 217 (643)
Q Consensus 138 ~~~~~~~~~~~~~lr~~l~~~il~~~~~~f~~~~~~~G~i~~r~s~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (643)
++....+.++..++|.++|+|++++|+.||+ ++++|++++|+++|++.+++.+...+..++..++.+++++++++.++
T Consensus 99 ~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~--~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~ 176 (598)
T 3qf4_B 99 KIMLTLSQDVVFRLRKELFEKLQRVPVGFFD--RTPHGDIISRVINDVDNINNVLGNSIIQFFSGIVTLAGAVIMMFRVN 176 (598)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCTHHHH--HSCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999779999976--88889999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 88999999999999999999999999999999999999999999998119999996308999999999999999999999
Q 006496 218 WRLALVIIAVQPLVIVCLYGKEVLLKSMSKKVIKAQDESSKLAAEAVSNLRTINAFSSQERIQKMLKKAHEAPRREGVRQ 297 (643)
Q Consensus 218 ~~~~~v~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~ 297 (643)
|.+++++++++|+.+++.....+..++..++..+..++....+.|.++|+++||+|++|+.+.+++.+..++..+...+.
T Consensus 177 ~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~ 256 (598)
T 3qf4_B 177 VILSLVTLSIVPLTVLITQIVSSQTRKYFYENQRVLGQLNGIIEEDISGLTVIKLFTREEKEMEKFDRVNESLRKVGTKA 256 (598)
T ss_dssp HHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999997379999974870999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99999999999999999999999999999871877988899999999999999999999999999999999999998725
Q 006496 298 SWIAGICLAFSRALVSCVVALAFWYGGRLVGRGYIDGKSLFEIFLILVSTGKVIADAGTMTTDIAKGSDAVASVFAVLDR 377 (643)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~~~~ 377 (643)
.+.......+..++..+..++++++|++++..|.++.|.+++++.+...+..++..+...+..+..+..+..|+.++++.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~ls~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~ 336 (598)
T 3qf4_B 257 QIFSGVLPPLMNMVNNLGFALISGFGGWLALKDIITVGTIATFIGYSRQFTRPLNELSNQFNMIQMALASAERIFEILDL 336 (598)
T ss_dssp HHHTTTHHHHHHHHHHHHHHHHHHHHHHHGGGTSSCHHHHHHHHTTTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999999999999999999999985997899999999999999999999999999999999999999999768
Q ss_pred CCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEE
Q ss_conf 76779899999999875565899958998899998432000159984895899986999987889999851578997479
Q 006496 378 HTKIDPDDLNGYQPEKIIGHIELEDVHFAYPARPNVMIFKGFSINIEAKKSTALVGQSGSGKSTIIGLIERFYDPLKGVV 457 (643)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~I~~~~vsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTL~~lL~gl~~~~~G~I 457 (643)
+++.+.. .....+...+.|+++||+|+|++ +.++|+|+||++++||++||+||||||||||+++|+|+|+|++|+|
T Consensus 337 ~~~~~~~--~~~~~~~~~~~i~~~~v~~~y~~--~~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~i 412 (598)
T 3qf4_B 337 EEEKDDP--DAVELREVRGEIEFKNVWFSYDK--KKPVLKDITFHIKPGQKVALVGPTGSGKTTIVNLLMRFYDVDRGQI 412 (598)
T ss_dssp CCCCCCS--SCCCCCSCCCCEEEEEEECCSSS--SSCSCCSEEEECCTTCEEEEECCTTSSTTHHHHHHTTSSCCSEEEE
T ss_pred CCCCCCC--CCCCCCCCCCEEEEEEEEEECCC--CCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEEE
T ss_conf 8777777--77777777771899998997799--9860122279986998899989999969999999945857998089
Q ss_pred EECCEECCCCCHHHHHCCCEEEECCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 89996089999888732307880588887002899971599999998999999998030889982001555412799998
Q 006496 458 KIDGRDIRSHHLRSLRRHIALVSQEPALFAGTIRENITYGASDKIDESEIIEAGKAANAHDFIAGLYEGYDTWCGDRGLQ 537 (643)
Q Consensus 458 ~idG~di~~~~~~~lR~~i~~v~Q~p~lf~gTIreNi~~g~~~~~~de~i~~al~~~~l~~~I~~lp~Gl~t~ige~G~~ 537 (643)
.+||+|+++++.+++|++++||||+|++|++|++|||.+|. +..++++++++++.++++++++.+|+|++|.+||+|.+
T Consensus 413 ~~~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~~~g~~ 491 (598)
T 3qf4_B 413 LVDGIDIRKIKRSSLRSSIGIVLQDTILFSTTVKENLKYGN-PGATDEEIKEAAKLTHSDHFIKHLPEGYETVLTDNGED 491 (598)
T ss_dssp EETTEEGGGSCHHHHHHHEEEECTTCCCCSSBHHHHHHSSS-TTCCTTHHHHHTTTTTCHHHHHTSTTGGGCBCHHHHTT
T ss_pred EECCEEHHHCCHHHHHHCEEEEECCCCCCCCCHHHHHHCCC-CCCCHHHHHHHHHHHCCHHHHHHCCCCCCCHHCCCCCC
T ss_conf 99999830188999984108990798232463999974479-99999999999999697888974645323642278898
Q ss_pred CCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHCCEEEEEECCEEEEEC
Q ss_conf 89469999999999815998788635578999898999999999871796399980592146513978999699798972
Q 006496 538 LSGGQKQRIAIARAVLKNPAVLLLDEATSALDSQSEKVVQEALERLMVERTSVVVAHRLSTIQNCDIIAVLEQGRVVEEG 617 (643)
Q Consensus 538 LSGGQkQRiaLARAll~~~~IliLDE~TSalD~~te~~i~~~i~~~~~~~TvI~ItHrl~~i~~~D~Iivl~~G~ive~G 617 (643)
||||||||+|||||++++|+|||||||||+||+++++.+++.+++..+++|+|+||||++++..||+|++|++|++++.|
T Consensus 492 LSgGq~Qrv~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g 571 (598)
T 3qf4_B 492 LSQGQRQLLAITRAFLANPKILILDEATSNVDTKTEKSIQAAMWKLMEGKTSIIIAHRLNTIKNADLIIVLRDGEIVEMG 571 (598)
T ss_dssp SCHHHHHHHHHHHHHHTCCSEEEECCCCTTCCHHHHHHHHHHHHHHHTTSEEEEESCCTTHHHHCSEEEEECSSSEEECS
T ss_pred CCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEEEC
T ss_conf 79999999999999964999999989766799999999999999980899899994277899719989999899999877
Q ss_pred CHHHHHHCCCCCHHHHHHHHHCC
Q ss_conf 82478503999078999972118
Q 006496 618 SHQSLLAKGPAGAYYSLVSLQTT 640 (643)
Q Consensus 618 ~~~~Ll~~~~~~~~~~l~~~~~~ 640 (643)
+|+||++ ++|.|++++..|..
T Consensus 572 ~~~~l~~--~~~~~~~~~~~~~~ 592 (598)
T 3qf4_B 572 KHDELIQ--KRGFYYELFTSQYG 592 (598)
T ss_dssp CHHHHHH--TTCHHHHHHHHHHG
T ss_pred CHHHHHH--CCCHHHHHHHHHHH
T ss_conf 8999986--78779999999764
No 6
>3qf4_A ABC transporter, ATP-binding protein; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=763.25 Aligned_cols=568 Identities=26% Similarity=0.417 Sum_probs=504.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99898345589999999999999989989999999999995025804687527899999999999999999999999999
Q 006496 63 RLLALNIPEWKQASLGCLSAVLFGAVQPVYAFAMGSMISVYFLKDHDEIKEKTRFYSLCFFGLSIFSLLTNVCQQYYFAY 142 (643)
Q Consensus 63 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 142 (643)
+++.+.+++|+.+.++.++.++..++.+..|++++.+++....... ......+..+++++.++..++.++..++..+
T Consensus 13 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (587)
T 3qf4_A 13 TLARYLKPYWIFAVLAPLFMVVEVICDLSQPTLLARIVDEGIARGD---FSLVLKTGILMLIVALIGAVGGIGCTVFASY 89 (587)
T ss_dssp CGGGGTGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999999999999999999999873698---7999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999719953322377694589999997799999999998999998999999999999999688999
Q 006496 143 MGEYLTKRIRENMLSKILTFEVGWFDQDENSSGAICSRLAKDANVVRSLVGDRVALLVQTFSSITIAFTMSLIISWRLAL 222 (643)
Q Consensus 143 ~~~~~~~~lr~~l~~~il~~~~~~f~~~~~~~G~i~~r~s~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (643)
.+.++..++|.++|+|++++|+.||+ ++++|++++|+++|++.+++++...+..++..++.+++++++++.++|.+++
T Consensus 90 ~~~~~~~~lr~~l~~~ll~~~~~~~~--~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~l 167 (587)
T 3qf4_A 90 ASQNFGADLRRDLFRKVLSFSISNVN--RFHTSSLITRLTNDVTQLQNLVMMLLRIVVRAPLLFVGGIVMAVSINVKLSS 167 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCHHHHH--HSCHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHCTTTTH
T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999788979976--5888999999999999999999999999999999999999999999899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999811999999630899999999999999999999999999
Q 006496 223 VIIAVQPLVIVCLYGKEVLLKSMSKKVIKAQDESSKLAAEAVSNLRTINAFSSQERIQKMLKKAHEAPRREGVRQSWIAG 302 (643)
Q Consensus 223 v~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (643)
++++.+|+++++.....+...+..++..+..++..+.+.|.++|+++||+|++|+.+.+++.+..++..+...+..+...
T Consensus 168 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (587)
T 3qf4_A 168 VLIFLIPPIVLLFVWLTKKGNPLFRKIQESTDEVNRVVRENLLGVRVVRAFRREEYENENFRKANESLRRSIISAFSLIV 247 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999855999998621499999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 99999999999999999999999987187798889999999999999999999999999999999999999872576779
Q 006496 303 ICLAFSRALVSCVVALAFWYGGRLVGRGYIDGKSLFEIFLILVSTGKVIADAGTMTTDIAKGSDAVASVFAVLDRHTKID 382 (643)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~~~~~~~~~ 382 (643)
....+..++..+..++++++|++++..|.++.|.+++++.+...+..++..+...+..+..+..+..|+.++++.+++.+
T Consensus 248 ~~~~~~~~~~~~~~~~vl~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~ 327 (587)
T 3qf4_A 248 FALPLFIFIVNMGMIAVLWFGGVLVRNNQMEIGSIMAYTNYLMQIMFSLMMIGNILNFIVRASASAKRVLEVLNEKPAIE 327 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 99999999999999999999999998499389999999999999999999999999999999999999999976897657
Q ss_pred CCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCE
Q ss_conf 89999999987556589995899889999843200015998489589998699998788999985157899747989996
Q 006496 383 PDDLNGYQPEKIIGHIELEDVHFAYPARPNVMIFKGFSINIEAKKSTALVGQSGSGKSTIIGLIERFYDPLKGVVKIDGR 462 (643)
Q Consensus 383 ~~~~~~~~~~~~~~~I~~~~vsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTL~~lL~gl~~~~~G~I~idG~ 462 (643)
+.. .....+...+.|+++||+|+|++. +.++|+|+||++++||++|||||||||||||+++|+|+|+|++|+|.+||+
T Consensus 328 ~~~-~~~~~~~~~~~i~~~~v~~~y~~~-~~~~l~~isl~i~~Ge~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~i~g~ 405 (587)
T 3qf4_A 328 EAD-NALALPNVEGSVSFENVEFRYFEN-TDPVLSGVNFSVKPGSLVAVLGETGSGKSTLMNLIPRLIDPERGRVEVDEL 405 (587)
T ss_dssp CCT-TCBCCSCCCCCEEEEEEEECSSSS-SCCSEEEEEEEECTTCEEEEECSSSSSHHHHHHTTTTSSCCSEEEEEESSS
T ss_pred CCC-CCCCCCCCCCCEEEEEEEEECCCC-CCCCEECEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCE
T ss_conf 887-765668888807997889984899-976421117998699889998999997999999992786699867989999
Q ss_pred ECCCCCHHHHHCCCEEEECCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHH
Q ss_conf 08999988873230788058888700289997159999999899999999803088998200155541279999889469
Q 006496 463 DIRSHHLRSLRRHIALVSQEPALFAGTIRENITYGASDKIDESEIIEAGKAANAHDFIAGLYEGYDTWCGDRGLQLSGGQ 542 (643)
Q Consensus 463 di~~~~~~~lR~~i~~v~Q~p~lf~gTIreNi~~g~~~~~~de~i~~al~~~~l~~~I~~lp~Gl~t~ige~G~~LSGGQ 542 (643)
|+++++.+++|++++||||+|++|++|++|||.++. +.+++++++++++.++++++++.+|+|+||.++|+|.+|||||
T Consensus 406 ~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~~~-~~~~~~~~~~~~~~~~~~~~i~~l~~g~~~~~~~~~~~LSgGq 484 (587)
T 3qf4_A 406 DVRTVKLKDLRGHISAVPQETVLFSGTIKENLKWGR-EDATDDEIVEAAKIAQIHDFIISLPEGYDSRVERGGRNFSGGQ 484 (587)
T ss_dssp BGGGBCHHHHHHHEEEECSSCCCCSEEHHHHHTTTC-SSCCHHHHHHHHHHTTCHHHHHTSSSGGGCEECSSSCSSCHHH
T ss_pred ECCCCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCC-CCCCHHHHHHHHHHHCCHHHHHHCCCCHHHHHCCCCCCCCHHH
T ss_conf 834078999984138977898676755999985248-8999999999999968499997565312127518989929999
Q ss_pred HHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHCCEEEEEECCEEEEECCHHHH
Q ss_conf 99999999981599878863557899989899999999987179639998059214651397899969979897282478
Q 006496 543 KQRIAIARAVLKNPAVLLLDEATSALDSQSEKVVQEALERLMVERTSVVVAHRLSTIQNCDIIAVLEQGRVVEEGSHQSL 622 (643)
Q Consensus 543 kQRiaLARAll~~~~IliLDE~TSalD~~te~~i~~~i~~~~~~~TvI~ItHrl~~i~~~D~Iivl~~G~ive~G~~~~L 622 (643)
|||+|||||++++|+|||||||||+||+++++.+++.+++..+++|+|+||||++++..||+|++|++|+++|.|+|+||
T Consensus 485 rQrv~lARal~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~~~~~d~i~vl~~G~i~~~g~~~el 564 (587)
T 3qf4_A 485 KQRLSIARALVKKPKVLILDDCTSSVDPITEKRILDGLKRYTKGCTTFIITQKIPTALLADKILVLHEGKVAGFGTHKEL 564 (587)
T ss_dssp HHHHHHHHHHHTCCSEEEEESCCTTSCHHHHHHHHHHHHHHSTTCEEEEEESCHHHHTTSSEEEEEETTEEEEEECHHHH
T ss_pred HHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECCHHHH
T ss_conf 99999999997299999997975447999999999999986799989998227688981998999989989997889999
Q ss_pred HHCCCCCHHHHHHHHHCC
Q ss_conf 503999078999972118
Q 006496 623 LAKGPAGAYYSLVSLQTT 640 (643)
Q Consensus 623 l~~~~~~~~~~l~~~~~~ 640 (643)
++ +++.|++++..|..
T Consensus 565 ~~--~~~~~~~~~~~~~~ 580 (587)
T 3qf4_A 565 LE--HCKPYREIYESQFG 580 (587)
T ss_dssp HH--HCHHHHHHHHHHC-
T ss_pred HH--CCCHHHHHHHHHHC
T ss_conf 86--78399999999846
No 7
>4a82_A Cystic fibrosis transmembrane conductance regulat; CFTR, ION channel, transport protein, casse protein; 2.00A {Homo sapiens} PDB: 2onj_A* 2hyd_A
Probab=1.00 E-value=1 Score=758.95 Aligned_cols=572 Identities=29% Similarity=0.431 Sum_probs=505.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH----HHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999898345589999999999999989989999999999995025804687527----899999999999999999999
Q 006496 61 FRRLLALNIPEWKQASLGCLSAVLFGAVQPVYAFAMGSMISVYFLKDHDEIKEKT----RFYSLCFFGLSIFSLLTNVCQ 136 (643)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~~~~~~~~ 136 (643)
+++++.+.+++++.++.+.++.++..++.+..|++++.+++.............. ..++.+++++.++..++.++.
T Consensus 2 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (578)
T 4a82_A 2 IKRYLQFVKPYKYRIFATIIVGIIKFGIPMLIPLLIKYAIDGVINNHALTTDEKVHHLTIAIGIALFIFVIVRPPIEFIR 81 (578)
T ss_dssp HHHHHHHHGGGHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 79999998899999999999999999999999999999999998168711467788889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999719953322377694589999997799999999998999998999999999999999
Q 006496 137 QYYFAYMGEYLTKRIRENMLSKILTFEVGWFDQDENSSGAICSRLAKDANVVRSLVGDRVALLVQTFSSITIAFTMSLII 216 (643)
Q Consensus 137 ~~~~~~~~~~~~~~lr~~l~~~il~~~~~~f~~~~~~~G~i~~r~s~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (643)
.++..+.+.++..++|.++|+|++++|++||+ ++++|++++|+++|++.+++++...+..++..++.+++++++++.+
T Consensus 82 ~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~--~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~ 159 (578)
T 4a82_A 82 QYLAQWTSNKILYDIRKKLYNHLQALSARFYA--NNQVGQVISRVINDVEQTKDFILTGLMNIWLDCITIIIALSIMFFL 159 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHH--TSCHHHHHHHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999878999976--8986999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 68899999999999999999999999999999999999999999999811999999630899999999999999999999
Q 006496 217 SWRLALVIIAVQPLVIVCLYGKEVLLKSMSKKVIKAQDESSKLAAEAVSNLRTINAFSSQERIQKMLKKAHEAPRREGVR 296 (643)
Q Consensus 217 ~~~~~~v~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~ 296 (643)
+|.+++++++..|+++++.....+...+..++..+..++..+.+.|.++|+++||+|++|+.+.+++.+..++..+...+
T Consensus 160 ~~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~ 239 (578)
T 4a82_A 160 DVKLTLAALFIFPFYILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKSFAIEDNEAKNFDKKNTNFLTRALK 239 (578)
T ss_dssp CTTTHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 69999999999999999999999999999999999999999999999824999998166499999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 99999999999999999999999999999987187798889999999999999999999999999999999999999872
Q 006496 297 QSWIAGICLAFSRALVSCVVALAFWYGGRLVGRGYIDGKSLFEIFLILVSTGKVIADAGTMTTDIAKGSDAVASVFAVLD 376 (643)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~~~ 376 (643)
..++......+..++..+..++++++|++++..|.++.|.+++++.+...+..|+..+...+..+..+..+..|+.++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~ 319 (578)
T 4a82_A 240 HTRWNAYSFAAINTVTDIGPIIVIGVGAYLAISGSITVGTLAAFVGYLELLFGPLRRLVASFTTLTQSFASMDRVFQLID 319 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHTHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 99999999999999999999999999999998599589999999999999999999999999999999999999999976
Q ss_pred CCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCE
Q ss_conf 57677989999999987556589995899889999843200015998489589998699998788999985157899747
Q 006496 377 RHTKIDPDDLNGYQPEKIIGHIELEDVHFAYPARPNVMIFKGFSINIEAKKSTALVGQSGSGKSTIIGLIERFYDPLKGV 456 (643)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~I~~~~vsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTL~~lL~gl~~~~~G~ 456 (643)
.+++..+.. .....+...+.|+++||+|+|++. +.++|+|+||++++||++||+||||||||||+++|+|+++|++|+
T Consensus 320 ~~~~~~~~~-~~~~~~~~~~~i~~~~v~~~y~~~-~~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~ 397 (578)
T 4a82_A 320 EDYDIKNGV-GAQPIEIKQGRIDIDHVSFQYNDN-EAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQ 397 (578)
T ss_dssp CCCSSCCCT-TCCCCCCCSCCEEEEEEEECSCSS-SCCSEEEEEEEECTTCEEEEECSTTSSHHHHHTTTTTSSCCSEEE
T ss_pred CCCCCCCCC-CCCCCCCCCCEEEEEEEEEECCCC-CCCCEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCE
T ss_conf 897666787-766667778807999999975899-974134337998799999998999985999999984678899967
Q ss_pred EEECCEECCCCCHHHHHCCCEEEECCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCC
Q ss_conf 98999608999988873230788058888700289997159999999899999999803088998200155541279999
Q 006496 457 VKIDGRDIRSHHLRSLRRHIALVSQEPALFAGTIRENITYGASDKIDESEIIEAGKAANAHDFIAGLYEGYDTWCGDRGL 536 (643)
Q Consensus 457 I~idG~di~~~~~~~lR~~i~~v~Q~p~lf~gTIreNi~~g~~~~~~de~i~~al~~~~l~~~I~~lp~Gl~t~ige~G~ 536 (643)
|.+||.|+++++.+++|++++||||+|++|++|++|||.+|. ++.++++++++++.++++++++.+|+|+||.+||+|.
T Consensus 398 i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~tv~eni~~~~-~~~~~~~~~~~~~~~~~~~~~~~lp~g~~t~~~~~g~ 476 (578)
T 4a82_A 398 ILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGR-PTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGV 476 (578)
T ss_dssp EEETTEEGGGSCHHHHHHTEEEECSSCCCCSSBHHHHHGGGC-SSCCHHHHHHHHHHTTCHHHHHTSTTGGGCBCCGGGT
T ss_pred EEECCEEHHHCCHHHHHHHEEEEECCCCCCCCCHHHHHHCCC-CCCCHHHHHHHHHHHCCHHHHHHCCCHHHHHHCCCCC
T ss_conf 999999844278999960068992898347645999985279-9988999999998809599997573301025306889
Q ss_pred CCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHCCEEEEEECCEEEEE
Q ss_conf 88946999999999981599878863557899989899999999987179639998059214651397899969979897
Q 006496 537 QLSGGQKQRIAIARAVLKNPAVLLLDEATSALDSQSEKVVQEALERLMVERTSVVVAHRLSTIQNCDIIAVLEQGRVVEE 616 (643)
Q Consensus 537 ~LSGGQkQRiaLARAll~~~~IliLDE~TSalD~~te~~i~~~i~~~~~~~TvI~ItHrl~~i~~~D~Iivl~~G~ive~ 616 (643)
+||||||||++||||++++|+|+|||||||+||+++++.+++.+++..+++|+|+||||+++++.||+|++|++|++++.
T Consensus 477 ~LSgGq~Qrv~lAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~ 556 (578)
T 4a82_A 477 KLSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVET 556 (578)
T ss_dssp TSCHHHHHHHHHHHHHHHCCSEEEEESTTTTCCHHHHHHHHHHHHHHTTTSEEEEECSSGGGTTTCSEEEEEETTEEEEE
T ss_pred CCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEEE
T ss_conf 67999999999999997499999997865457999999999999998089979998317899971998999989989998
Q ss_pred CCHHHHHHCCCCCHHHHHHHHHC
Q ss_conf 28247850399907899997211
Q 006496 617 GSHQSLLAKGPAGAYYSLVSLQT 639 (643)
Q Consensus 617 G~~~~Ll~~~~~~~~~~l~~~~~ 639 (643)
|+|+||++ +++.|+++|+.|.
T Consensus 557 g~~~el~~--~~~~~~~~~~~q~ 577 (578)
T 4a82_A 557 GTHRELIA--KQGAYEHLYSIQN 577 (578)
T ss_dssp ECHHHHHH--TTSHHHHHHTTTT
T ss_pred CCHHHHHH--CCCHHHHHHHHHC
T ss_conf 88999985--8838999998506
No 8
>2yl4_A ATP-binding cassette SUB-family B member 10, mitochondrial; membrane protein, mitochondrial transport; HET: ACP LMT CDL 14Y; 2.85A {Homo sapiens} PDB: 4aa3_A*
Probab=1.00 E-value=1 Score=740.58 Aligned_cols=578 Identities=34% Similarity=0.521 Sum_probs=502.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999898345589999999999999989989999999999995025804687527899999999999999999999999
Q 006496 60 SFRRLLALNIPEWKQASLGCLSAVLFGAVQPVYAFAMGSMISVYFLKDHDEIKEKTRFYSLCFFGLSIFSLLTNVCQQYY 139 (643)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 139 (643)
.+++++.+.+++++.+..+.++.++.+++.+..|++++.+++................++.+++++.++..++.+++.++
T Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (595)
T 2yl4_A 6 EARKLLGLAYPERRRLAAAVGFLTMSSVISMSAPFFLGKIIDVIYTNPTVDYSDNLTRLCLGLSAVFLCGAAANAIRVYL 85 (595)
T ss_dssp HHHHHHHHHGGGHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHCTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999887899999999999999999999999999999999735740266799999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999719953322377694589999997799999999998999998999999999999999688
Q 006496 140 FAYMGEYLTKRIRENMLSKILTFEVGWFDQDENSSGAICSRLAKDANVVRSLVGDRVALLVQTFSSITIAFTMSLIISWR 219 (643)
Q Consensus 140 ~~~~~~~~~~~lr~~l~~~il~~~~~~f~~~~~~~G~i~~r~s~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (643)
....+.++..++|.++|++++++|++||+ ++++|++++|+++|++.+++.+...+..++..++.+++.+++++.++|.
T Consensus 86 ~~~~~~~~~~~lr~~l~~~l~~~~~~~~~--~~~~g~l~~r~~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~ 163 (595)
T 2yl4_A 86 MQTSGQRIVNRLRTSLFSSILRQEVAFFD--KTRTGELINRLSSDTALLGRSVTENLSDGLRAGAQASVGISMMFFVSPN 163 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCHHHHH--HSCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHHHC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999819999977--7984889999999999999999999999999999999999999998199
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999999811999999630899999999999999999999999
Q 006496 220 LALVIIAVQPLVIVCLYGKEVLLKSMSKKVIKAQDESSKLAAEAVSNLRTINAFSSQERIQKMLKKAHEAPRREGVRQSW 299 (643)
Q Consensus 220 ~~~v~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 299 (643)
+++++++.+|+++++.....+...+..++..+..++....+.|.++|+++||+|++|+.+.+++.+..++..+...+..+
T Consensus 164 l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 243 (595)
T 2yl4_A 164 LATFVLSVVPPVSIIAVIYGRYLRKLTKVTQDSLAQATQLAEERIGNVRTVRAFGKEMTEIEKYASKVDHVMQLARKEAF 243 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999811999998375699999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 99999999999999999999999999987187798889999999999999999999999999999999999999872576
Q 006496 300 IAGICLAFSRALVSCVVALAFWYGGRLVGRGYIDGKSLFEIFLILVSTGKVIADAGTMTTDIAKGSDAVASVFAVLDRHT 379 (643)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~~~~~~ 379 (643)
...+...+..++..+..++++++|++++..|.+++|.+++++.+...+..|+..+...+..+..+..+..|+.++++.++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~ 323 (595)
T 2yl4_A 244 ARAGFFGATGLSGNLIVLSVLYKGGLLMGSAHMTVGELSSFLMYAFWVGISIGGLSSFYSELMKGLGAGGRLWELLEREP 323 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99999999999999999999999999998699789999999999999999999999999999999999999999983897
Q ss_pred CCCCCCCCCCCCCCCCCC-EEEEEEEEECCCCCCCCCEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEE
Q ss_conf 779899999999875565-8999589988999984320001599848958999869999878899998515789974798
Q 006496 380 KIDPDDLNGYQPEKIIGH-IELEDVHFAYPARPNVMIFKGFSINIEAKKSTALVGQSGSGKSTIIGLIERFYDPLKGVVK 458 (643)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~-I~~~~vsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTL~~lL~gl~~~~~G~I~ 458 (643)
+.+... ....+....+. |+++||+|+|+++++.++|+|+||++++||++||+||||||||||+++|.|+++|++|+|.
T Consensus 324 ~~~~~~-~~~~~~~~~~~~i~~~~v~~~y~~~~~~~vl~~isl~i~~G~~~~ivG~sGsGKSTLl~~l~g~~~p~~G~i~ 402 (595)
T 2yl4_A 324 KLPFNE-GVILNEKSFQGALEFKNVHFAYPARPEVPIFQDFSLSIPSGSVTALVGPSGSGKSTVLSLLLRLYDPASGTIS 402 (595)
T ss_dssp SSCSSC-SBCCCTTTCCCCEEEEEEEEECSSCTTSEEEEEEEEEECTTCEEEEECCTTSSSTHHHHHHTTSSCCSEEEEE
T ss_pred CCCCCC-CCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEE
T ss_conf 667777-8777767899838999889985899888120112799849988999899999799999998258578983799
Q ss_pred ECCEECCCCCHHHHHCCCEEEECCCCCCCCCHHHHHHCCCCC--CCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCC
Q ss_conf 999608999988873230788058888700289997159999--999899999999803088998200155541279999
Q 006496 459 IDGRDIRSHHLRSLRRHIALVSQEPALFAGTIRENITYGASD--KIDESEIIEAGKAANAHDFIAGLYEGYDTWCGDRGL 536 (643)
Q Consensus 459 idG~di~~~~~~~lR~~i~~v~Q~p~lf~gTIreNi~~g~~~--~~~de~i~~al~~~~l~~~I~~lp~Gl~t~ige~G~ 536 (643)
+||+|+++++.+++|++++||||+|++|++|++|||.++.+. +.++++++++++.++++++++.+|+|+||.+||+|.
T Consensus 403 ~~g~~i~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~~~~~~~ 482 (595)
T 2yl4_A 403 LDGHDIRQLNPVWLRSKIGTVSQEPILFSCSIAENIAYGADDPSSVTAEEIQRVAEVANAVAFIRNFPQGFNTVVGEKGV 482 (595)
T ss_dssp ETTEETTTBCHHHHHHSEEEECSSCCCCSSBHHHHHHTTSSSTTTSCHHHHHHHHHHTTCHHHHHTSSSGGGCBCSSSSC
T ss_pred ECCEEHHHCCHHHHHHCEEEECCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCC
T ss_conf 99998111799999732289836883268779999840587766568999999999869799997473201350168878
Q ss_pred CCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHCCEEEEEECCEEEEE
Q ss_conf 88946999999999981599878863557899989899999999987179639998059214651397899969979897
Q 006496 537 QLSGGQKQRIAIARAVLKNPAVLLLDEATSALDSQSEKVVQEALERLMVERTSVVVAHRLSTIQNCDIIAVLEQGRVVEE 616 (643)
Q Consensus 537 ~LSGGQkQRiaLARAll~~~~IliLDE~TSalD~~te~~i~~~i~~~~~~~TvI~ItHrl~~i~~~D~Iivl~~G~ive~ 616 (643)
+||||||||++||||++++|+|+|||||||+||+++++.+.+.+++..+++|+|+||||++++..||+|++|++|++++.
T Consensus 483 ~LSgGq~qrv~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~ 562 (595)
T 2yl4_A 483 LLSGGQKQRIAIARALLKNPKILLLDEATSALDAENEYLVQEALDRLMDGRTVLVIAHRLSTIKNANMVAVLDQGKITEY 562 (595)
T ss_dssp CCCHHHHHHHHHHHHHHHCCSEEEEECCCSSCCHHHHHHHHHHHHHHHTTSEEEEECCCHHHHHHSSEEEEEETTEEEEE
T ss_pred CCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHCCCEEEEEECCEEEEE
T ss_conf 68999999999999997599999998866689989999999999999659979999468789975998999989989997
Q ss_pred CCHHHHHHCCCCCHHHHHHHHHCCC
Q ss_conf 2824785039990789999721189
Q 006496 617 GSHQSLLAKGPAGAYYSLVSLQTTP 641 (643)
Q Consensus 617 G~~~~Ll~~~~~~~~~~l~~~~~~~ 641 (643)
|+|++++++ +++.|+++++.|...
T Consensus 563 g~~~~l~~~-~~~~~~~~~~~q~~~ 586 (595)
T 2yl4_A 563 GKHEELLSK-PNGIYRKLMNKQSFI 586 (595)
T ss_dssp ECSCC-------C------------
T ss_pred CCHHHHHHC-CCHHHHHHHHHHHCC
T ss_conf 889999747-872999999974302
No 9
>3b5x_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; 5.50A {Vibrio cholerae}
Probab=1.00 E-value=1 Score=737.55 Aligned_cols=571 Identities=29% Similarity=0.469 Sum_probs=502.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89999989834558999999999999998998999999999999502580468752789999999999999999999999
Q 006496 59 PSFRRLLALNIPEWKQASLGCLSAVLFGAVQPVYAFAMGSMISVYFLKDHDEIKEKTRFYSLCFFGLSIFSLLTNVCQQY 138 (643)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 138 (643)
..+++++.+.+++++.+.++.++.++.+++.+..|++++.+++....... .....+++.+++++.++..++.++..+
T Consensus 11 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (582)
T 3b5x_A 11 QTFKRLWTYIRLYKAGLVVSTIALVINAAADTYMISLLKPLLDEGFGNAE---SNFLRILPFMILGLMFVRGLSGFASSY 87 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC---HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999988999999999999999999999999999999999864686---679999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999971995332237769458999999779999999999899999899999999999999968
Q 006496 139 YFAYMGEYLTKRIRENMLSKILTFEVGWFDQDENSSGAICSRLAKDANVVRSLVGDRVALLVQTFSSITIAFTMSLIISW 218 (643)
Q Consensus 139 ~~~~~~~~~~~~lr~~l~~~il~~~~~~f~~~~~~~G~i~~r~s~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (643)
+....+.++..++|.+++++++++|+.||+ ++++|++++|+++|++.+++.+...+..++..++.+++++++++.++|
T Consensus 88 ~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~--~~~~g~l~~rl~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~ 165 (582)
T 3b5x_A 88 CLSWVSGNVVMQMRRRLFNHFMHMPVRFFD--QESTGGLLSRITYDSEQVAGATSRALVSIVREGASIIGLLTLMFWNSW 165 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHHC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999999869999977--898789999999889999999999999999999999999999999829
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89999999999999999999999999999999999999999999981199999963089999999999999999999999
Q 006496 219 RLALVIIAVQPLVIVCLYGKEVLLKSMSKKVIKAQDESSKLAAEAVSNLRTINAFSSQERIQKMLKKAHEAPRREGVRQS 298 (643)
Q Consensus 219 ~~~~v~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~ 298 (643)
.+++++++.+|+.+++.....+...+..++..+..++....+.|.++|+++||+|++|+.+.+++.+..++..+...+..
T Consensus 166 ~l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~ 245 (582)
T 3b5x_A 166 QLSLVLIVVAPVVAFAISFVSKRFRKISRNMQTAMGHVTSSAEQMLKGHKVVLSYGGQEVERKRFDKVSNSMRQQTMKLV 245 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999995199999708759999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 99999999999999999999999999998718779888999999999999999999999999999999999999987257
Q 006496 299 WIAGICLAFSRALVSCVVALAFWYGGRLVGRGYIDGKSLFEIFLILVSTGKVIADAGTMTTDIAKGSDAVASVFAVLDRH 378 (643)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~~~~~ 378 (643)
+...+...+..++..+..++++++|++++..|.++.|.+++++.+...+..|+..+...+..+..+..+..|+.++++.+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~i~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~~l~~~ 325 (582)
T 3b5x_A 246 SAQSIADPVIQMIASLALFAVLFLASVDSIRAELTPGTFTVVFSAMFGLMRPLKALTSVTSEFQRGMAACQTLFGLMDLE 325 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999999999999999999999999999859988999999999999999999999999999999999999999997589
Q ss_pred CCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEE
Q ss_conf 67798999999998755658999589988999984320001599848958999869999878899998515789974798
Q 006496 379 TKIDPDDLNGYQPEKIIGHIELEDVHFAYPARPNVMIFKGFSINIEAKKSTALVGQSGSGKSTIIGLIERFYDPLKGVVK 458 (643)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~I~~~~vsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTL~~lL~gl~~~~~G~I~ 458 (643)
++.++ . ....+...+.|+++||+|+|+++ +.++|+|+||++++||+++|+||||||||||+++|.|+++|++|+|.
T Consensus 326 ~~~~~-~--~~~~~~~~~~i~~~~v~~~y~~~-~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~i~ 401 (582)
T 3b5x_A 326 TERDN-G--KYEAERVNGEVDVKDVTFTYQGK-EKPALSHVSFSIPQGKTVALVGRSGSGKSTIANLFTRFYDVDSGSIC 401 (582)
T ss_pred CCCCC-C--CCCCCCCCCEEEEEEEEEECCCC-CCCCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEE
T ss_conf 76777-7--77777788828999989972899-86540041699879998999899999799999999657789998798
Q ss_pred ECCEECCCCCHHHHHCCCEEEECCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 99960899998887323078805888870028999715999999989999999980308899820015554127999988
Q 006496 459 IDGRDIRSHHLRSLRRHIALVSQEPALFAGTIRENITYGASDKIDESEIIEAGKAANAHDFIAGLYEGYDTWCGDRGLQL 538 (643)
Q Consensus 459 idG~di~~~~~~~lR~~i~~v~Q~p~lf~gTIreNi~~g~~~~~~de~i~~al~~~~l~~~I~~lp~Gl~t~ige~G~~L 538 (643)
+||.|+++++.+++|++++||||+|++|++|++|||.++..++.++++++++++.++++++++.+|+|+||.+||+|.+|
T Consensus 402 ~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~g~~t~~~~~~~~L 481 (582)
T 3b5x_A 402 LDGHDVRDYKLTNLRRHFALVSQNVHLFNDTIANNIAYAAEGEYTREQIEQAARQAHAMEFIENMPQGLDTVIGENGTSL 481 (582)
T ss_pred ECCEEHHHCCHHHHHCCEEEECCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCHHCCCCCCC
T ss_conf 99998563889999648589827990531029999856688999999999999987989999847653345106888847
Q ss_pred CHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHCCEEEEEECCEEEEECC
Q ss_conf 94699999999998159987886355789998989999999998717963999805921465139789996997989728
Q 006496 539 SGGQKQRIAIARAVLKNPAVLLLDEATSALDSQSEKVVQEALERLMVERTSVVVAHRLSTIQNCDIIAVLEQGRVVEEGS 618 (643)
Q Consensus 539 SGGQkQRiaLARAll~~~~IliLDE~TSalD~~te~~i~~~i~~~~~~~TvI~ItHrl~~i~~~D~Iivl~~G~ive~G~ 618 (643)
|||||||++||||++++|+|+|||||||+||+++++.+++.|++..+++|+|+||||++++..||+|++|++|++++.|+
T Consensus 482 SgGq~qr~~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~ 561 (582)
T 3b5x_A 482 SGGQRQRVAIARALLRDAPVLILDEATSALDTESERAIQAALDELQKNKTVLVIAHRLSTIEQADEILVVDEGEIIERGR 561 (582)
T ss_pred CHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECC
T ss_conf 99999999999999749999999785446899999999999999728998999936889998199899998998999778
Q ss_pred HHHHHHCCCCCHHHHHHHHHCC
Q ss_conf 2478503999078999972118
Q 006496 619 HQSLLAKGPAGAYYSLVSLQTT 640 (643)
Q Consensus 619 ~~~Ll~~~~~~~~~~l~~~~~~ 640 (643)
|+++++ .++.|+++++.|..
T Consensus 562 ~~~l~~--~~~~~~~~~~~q~~ 581 (582)
T 3b5x_A 562 HADLLA--QDGAYAQLHRIQFG 581 (582)
T ss_pred HHHHHH--CCCHHHHHHHHHHC
T ss_conf 999984--88589999998612
No 10
>3b60_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; HET: ANP; 3.70A {Salmonella typhimurium} SCOP: c.37.1.12 f.37.1.1 PDB: 3b5y_A* 3b5z_A* 3b5w_A
Probab=1.00 E-value=1 Score=736.51 Aligned_cols=571 Identities=31% Similarity=0.485 Sum_probs=502.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89999989834558999999999999998998999999999999502580468752789999999999999999999999
Q 006496 59 PSFRRLLALNIPEWKQASLGCLSAVLFGAVQPVYAFAMGSMISVYFLKDHDEIKEKTRFYSLCFFGLSIFSLLTNVCQQY 138 (643)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 138 (643)
..+++++.+.+++++.+..+.++.++.+++.+..|++++.+++....... . ....+++.+++++.++..++.++..+
T Consensus 11 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (582)
T 3b60_A 11 QTFRRLWPTIAPFKAGLIVAGIALILNAASDTFMLSLLKPLLDDGFGKTD--R-SVLLWMPLVVIGLMILRGITSYISSY 87 (582)
T ss_dssp HHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHSSTTSTT--H-HHHHHSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC--H-HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999998843686--5-79999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999971995332237769458999999779999999999899999899999999999999968
Q 006496 139 YFAYMGEYLTKRIRENMLSKILTFEVGWFDQDENSSGAICSRLAKDANVVRSLVGDRVALLVQTFSSITIAFTMSLIISW 218 (643)
Q Consensus 139 ~~~~~~~~~~~~lr~~l~~~il~~~~~~f~~~~~~~G~i~~r~s~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (643)
+....+.++..++|.+++++++++|+.||+ ++++|++++|+++|++.+++.+...+..++..++.+++.+++++.++|
T Consensus 88 ~~~~~~~~~~~~lr~~l~~~l~~~~~~~~~--~~~~g~l~~r~~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~ 165 (582)
T 3b60_A 88 CISWVSGKVVMTMRRRLFGHMMGMPVAFFD--KQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSW 165 (582)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCSTHHH--HSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHHC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999999809999978--898658999999879999999999999999999999999999999809
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89999999999999999999999999999999999999999999981199999963089999999999999999999999
Q 006496 219 RLALVIIAVQPLVIVCLYGKEVLLKSMSKKVIKAQDESSKLAAEAVSNLRTINAFSSQERIQKMLKKAHEAPRREGVRQS 298 (643)
Q Consensus 219 ~~~~v~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~ 298 (643)
.+++++++.+|+++++.....+...+..++..+..++....+.|.++|+++||+|++|+.+.+++.+..++..+...+..
T Consensus 166 ~l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~ 245 (582)
T 3b60_A 166 QLSIILVVLAPIVSIAIRVVSKRFRSISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNKMRLQGMKMV 245 (582)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999996199999837689999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 99999999999999999999999999998718779888999999999999999999999999999999999999987257
Q 006496 299 WIAGICLAFSRALVSCVVALAFWYGGRLVGRGYIDGKSLFEIFLILVSTGKVIADAGTMTTDIAKGSDAVASVFAVLDRH 378 (643)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~~~~~ 378 (643)
+...+...+..++..+..++++++|++++..|.++.|.+++++.+...+..|+..+...+..+..+..+..|+.++++.+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~~l~~~ 325 (582)
T 3b60_A 246 SASSISDPIIQLIASLALAFVLYAASFPSVMDSLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDSE 325 (582)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSSSTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999999999999999999999999999849998999999999999999999999999999999999999999997599
Q ss_pred CCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEE
Q ss_conf 67798999999998755658999589988999984320001599848958999869999878899998515789974798
Q 006496 379 TKIDPDDLNGYQPEKIIGHIELEDVHFAYPARPNVMIFKGFSINIEAKKSTALVGQSGSGKSTIIGLIERFYDPLKGVVK 458 (643)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~I~~~~vsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTL~~lL~gl~~~~~G~I~ 458 (643)
++.+. . ....+...+.|+++||+|+|+++ +.++|+|+||++++||++||+||||||||||+++|.|+++|++|+|.
T Consensus 326 ~~~~~-~--~~~~~~~~~~i~~~~v~~~y~~~-~~~~l~~v~~~i~~G~~~~ivG~sGsGKSTLl~~l~g~~~p~~G~i~ 401 (582)
T 3b60_A 326 QEKDE-G--KRVIDRATGDLEFRNVTFTYPGR-EVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDEGHIL 401 (582)
T ss_dssp CSCCC-C--CBCCSCCCCCEEEEEEEECSSSS-SCCSEEEEEEEECTTCEEEEEECTTSSHHHHHHHHTTTTCCSEEEEE
T ss_pred CCCCC-C--CCCCCCCCCCEEEEEEEEECCCC-CCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCEEE
T ss_conf 87667-7--77777888847999889973999-97441561599769998999899999899999998610689897697
Q ss_pred ECCEECCCCCHHHHHCCCEEEECCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 99960899998887323078805888870028999715999999989999999980308899820015554127999988
Q 006496 459 IDGRDIRSHHLRSLRRHIALVSQEPALFAGTIRENITYGASDKIDESEIIEAGKAANAHDFIAGLYEGYDTWCGDRGLQL 538 (643)
Q Consensus 459 idG~di~~~~~~~lR~~i~~v~Q~p~lf~gTIreNi~~g~~~~~~de~i~~al~~~~l~~~I~~lp~Gl~t~ige~G~~L 538 (643)
+||+|+++++.+++|++++||||+|++|++|++|||.++..++.++++++++++.++++++++.+|+|+||.+||+|.+|
T Consensus 402 ~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p~g~~~~~~~~~~~L 481 (582)
T 3b60_A 402 MDGHDLREYTLASLRNQVALVSQNVHLFNDTVANNIAYARTEEYSREQIEEAARMAYAMDFINKMDNGLDTIIGENGVLL 481 (582)
T ss_dssp ETTEETTTBCHHHHHHTEEEECSSCCCCSSBHHHHHHTTTTSCCCHHHHHHHHHTTTCHHHHHHSTTGGGSBCCTTSCSS
T ss_pred ECCEECCCCCHHHHHHHCEEECCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCC
T ss_conf 99998230699999960808806874778789999854599998999999999984979999845041145114798878
Q ss_pred CHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHCCEEEEEECCEEEEECC
Q ss_conf 94699999999998159987886355789998989999999998717963999805921465139789996997989728
Q 006496 539 SGGQKQRIAIARAVLKNPAVLLLDEATSALDSQSEKVVQEALERLMVERTSVVVAHRLSTIQNCDIIAVLEQGRVVEEGS 618 (643)
Q Consensus 539 SGGQkQRiaLARAll~~~~IliLDE~TSalD~~te~~i~~~i~~~~~~~TvI~ItHrl~~i~~~D~Iivl~~G~ive~G~ 618 (643)
|||||||++||||++++|+|+|||||||+||+++++.+++.+++..+++|+|+||||++++..||+|++|++|++++.|+
T Consensus 482 SgGq~qrl~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~ 561 (582)
T 3b60_A 482 SGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEQADEIVVVEDGIIVERGT 561 (582)
T ss_dssp CHHHHHHHHHHHHHHHCCSEEEEETTTSSCCHHHHHHHHHHHHHHHTTSEEEEECSCGGGTTTCSEEEEEETTEEEEEEC
T ss_pred CHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECC
T ss_conf 99999999999999728998999786555798999999999999967997999945477898599899997888988458
Q ss_pred HHHHHHCCCCCHHHHHHHHHCC
Q ss_conf 2478503999078999972118
Q 006496 619 HQSLLAKGPAGAYYSLVSLQTT 640 (643)
Q Consensus 619 ~~~Ll~~~~~~~~~~l~~~~~~ 640 (643)
|+++++ +++.|+++++.|..
T Consensus 562 ~~~l~~--~~~~~~~~~~~q~~ 581 (582)
T 3b60_A 562 HSELLA--QHGVYAQLHKMQFG 581 (582)
T ss_dssp HHHHHH--HTSSHHHHHHHTCC
T ss_pred HHHHHH--CCCHHHHHHHHHCC
T ss_conf 999987--69889999997502
Done!