BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006497
(643 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6NLV4|FY_ARATH Flowering time control protein FY OS=Arabidopsis thaliana GN=FY
PE=1 SV=1
Length = 647
Score = 789 bits (2037), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/624 (69%), Positives = 468/624 (75%), Gaps = 61/624 (9%)
Query: 1 MRKLTQRRAVDYTSTVVRYMQIRMWQRDSRDRTVLQATPAAAIDMLPTVAYTDNPSTSFA 60
MRK TQRRAVDYTSTVVRY+Q R WQRDSRDRT LQ TPAAA+DMLPTVAY+DNPSTSFA
Sbjct: 52 MRKHTQRRAVDYTSTVVRYIQARTWQRDSRDRTTLQPTPAAAVDMLPTVAYSDNPSTSFA 111
Query: 61 AKFVHTSLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSM 120
AKFVH SLNKNRCSINRVLWTP+GRRLITGSQSGEFTLWNGQSFNFEMILQAHD IRSM
Sbjct: 112 AKFVHASLNKNRCSINRVLWTPSGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQPIRSM 171
Query: 121 VWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTV 180
VWSHN+N+MVSGDDGG +KYWQNNMNNVKANK+AHKES+RDLSFC+TDLKFCSCSDDTTV
Sbjct: 172 VWSHNENYMVSGDDGGTLKYWQNNMNNVKANKTAHKESIRDLSFCKTDLKFCSCSDDTTV 231
Query: 181 KVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHK 240
KVWDF +C +E SLTGHGWDVKSVDWHPTKSLLVSGGKD LVKLWD +SGRELCS HGHK
Sbjct: 232 KVWDFTKCVDESSLTGHGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRSGRELCSLHGHK 291
Query: 241 NMVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVS 300
N+VL VKWNQNGNW+LTASKDQIIKLYDIR MKEL+SFRGH KDVT+LAWHP HEEYFVS
Sbjct: 292 NIVLSVKWNQNGNWLLTASKDQIIKLYDIRTMKELQSFRGHTKDVTSLAWHPCHEEYFVS 351
Query: 301 GSLDGSIFHWLVGHETPQVEIHNVHDNTVWDLAWHPIGYLLCSGSNDHTTKFWCRNRPGD 360
GS DGSI HW+VGHE PQ+EI N HDN+VWDLAWHPIGYLLCSGSNDHTTKFWCRNRP D
Sbjct: 352 GSSDGSICHWIVGHENPQIEIPNAHDNSVWDLAWHPIGYLLCSGSNDHTTKFWCRNRPAD 411
Query: 361 TARDKFNMGQNQGYGEQNAVFAGRMPGNFPLPEGPTTPGPFAPGLTRNEGTIPGVGVAMP 420
RD + QNQGY EQ GR P NF E PG F PGLTRNEGTIPG+G+AMP
Sbjct: 412 NPRDV--LMQNQGYNEQG---FGRQPDNFQPSEASPIPGAFVPGLTRNEGTIPGIGIAMP 466
Query: 421 LSIPSFDSSAQGEQKQPLSMPLGAPPLPPGPHPSLLTANQQQGYQQNPPPMPPQQHQGHP 480
FD+S+QG+ KQPL + P G Q QQHQGHP
Sbjct: 467 -----FDASSQGDHKQPLPGSMALGAPP----LPPGPHPSLLGSGQQQGYQQQQQHQGHP 517
Query: 481 QQMPHLAMPPQNMP--QLQPPSHLPMLQHPHISRPPPQMPQLGMPSPM---PGSLPTPSS 535
QQM L MP NMP QL P SH+P+ HPH +P PM P P S
Sbjct: 518 QQM--LPMP--NMPHHQLPPSSHMPL--HPH-----------HLPRPMQMPPHGHMPPPS 560
Query: 536 HPMS--MPVPVGMQGSMNQMAPPMQQGHYMGMNPMHSGGGAPPQVGGFPNGMQGPPNSSG 593
PMS MP +GMQG MN P M Q H+M GAP V QG PNS G
Sbjct: 561 MPMSHQMPGSMGMQGGMN---PQMSQSHFM---------GAPSGV------FQGQPNSGG 602
Query: 594 PQMYPQG-GAFNRPQGQMPMMPGY 616
PQMYPQG G FNRPQ M+PGY
Sbjct: 603 PQMYPQGRGGFNRPQ----MIPGY 622
>sp|Q9C0J8|WDR33_HUMAN pre-mRNA 3' end processing protein WDR33 OS=Homo sapiens GN=WDR33
PE=1 SV=2
Length = 1336
Score = 473 bits (1216), Expect = e-132, Method: Compositional matrix adjust.
Identities = 210/384 (54%), Positives = 269/384 (70%), Gaps = 4/384 (1%)
Query: 1 MRKLTQRRAVDYTSTVVRYMQIRMWQRDSRDRTVLQATPAAAIDMLPTVAYTDNPSTSFA 60
MRK R+ +DY +V++Y++ R+WQRD RD +Q D++P + +NP +
Sbjct: 48 MRKAVNRKTIDYNPSVIKYLENRIWQRDQRDMRAIQPDAGYYNDLVPPIGMLNNPMNAVT 107
Query: 61 AKFVHTSLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSM 120
KFV TS NK +C + V WTP GRRL+TG+ SGEFTLWNG +FNFE ILQAHD +R+M
Sbjct: 108 TKFVRTSTNKVKCPVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAM 167
Query: 121 VWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTV 180
WSHND WM++ D GG +KYWQ+NMNNVK + AHKE++R+ SF TD KF +CSDD TV
Sbjct: 168 TWSHNDMWMLTADHGGYVKYWQSNMNNVKMFQ-AHKEAIREASFSPTDNKFATCSDDGTV 226
Query: 181 KVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSL--VKLWDAKSGRELCSFHG 238
++WDF RC EER L GHG DVK VDWHPTK L+VSG KDS +K WD K+G+ L + H
Sbjct: 227 RIWDFLRCHEERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHA 286
Query: 239 HKNMVLCVKWNQNGNWVLTASKDQIIKLYDIRAMK-ELESFRGHRKDVTALAWHPFHEEY 297
HKN V+ VK N NGNW+LTAS+D + KL+DIR +K EL+ FRGH+K+ TA+AWHP HE
Sbjct: 287 HKNTVMEVKLNLNGNWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGL 346
Query: 298 FVSGSLDGSIFHWLVGHETPQVEIHNVHDNTVWDLAWHPIGYLLCSGSNDHTTKFWCRNR 357
F SG DGS+ W VG E + H+ +W LAWHP+G++LCSGSNDHT+KFW RNR
Sbjct: 347 FASGGSDGSLLFWHVGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNR 406
Query: 358 PGDTARDKFNMGQNQGYGEQNAVF 381
PGD RD++N+ G E +
Sbjct: 407 PGDKMRDRYNLNLLPGMSEDGVEY 430
>sp|Q8K4P0|WDR33_MOUSE pre-mRNA 3' end processing protein WDR33 OS=Mus musculus GN=Wdr33
PE=2 SV=1
Length = 1330
Score = 473 bits (1216), Expect = e-132, Method: Compositional matrix adjust.
Identities = 210/384 (54%), Positives = 269/384 (70%), Gaps = 4/384 (1%)
Query: 1 MRKLTQRRAVDYTSTVVRYMQIRMWQRDSRDRTVLQATPAAAIDMLPTVAYTDNPSTSFA 60
MRK R+ +DY +V++Y++ R+WQRD RD +Q D++P + +NP +
Sbjct: 48 MRKAVNRKTIDYNPSVIKYLENRIWQRDQRDMRAIQPDAGYYNDLVPPIGMLNNPMNAVT 107
Query: 61 AKFVHTSLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSM 120
KFV TS NK +C + V WTP GRRL+TG+ SGEFTLWNG +FNFE ILQAHD +R+M
Sbjct: 108 TKFVRTSTNKVKCPVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAM 167
Query: 121 VWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTV 180
WSHND WM++ D GG +KYWQ+NMNNVK + AHKE++R+ SF TD KF +CSDD TV
Sbjct: 168 TWSHNDMWMLTADHGGYVKYWQSNMNNVKMFQ-AHKEAIREASFSPTDNKFATCSDDGTV 226
Query: 181 KVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSL--VKLWDAKSGRELCSFHG 238
++WDF RC EER L GHG DVK VDWHPTK L+VSG KDS +K WD K+G+ L + H
Sbjct: 227 RIWDFLRCHEERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHA 286
Query: 239 HKNMVLCVKWNQNGNWVLTASKDQIIKLYDIRAMK-ELESFRGHRKDVTALAWHPFHEEY 297
HKN V+ VK N NGNW+LTAS+D + KL+DIR +K EL+ FRGH+K+ TA+AWHP HE
Sbjct: 287 HKNTVMEVKLNLNGNWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGL 346
Query: 298 FVSGSLDGSIFHWLVGHETPQVEIHNVHDNTVWDLAWHPIGYLLCSGSNDHTTKFWCRNR 357
F SG DGS+ W VG E + H+ +W LAWHP+G++LCSGSNDHT+KFW RNR
Sbjct: 347 FASGGSDGSLLFWHVGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNR 406
Query: 358 PGDTARDKFNMGQNQGYGEQNAVF 381
PGD RD++N+ G E +
Sbjct: 407 PGDKMRDRYNLNLLPGMSEDGVEY 430
>sp|Q7RY68|PFS2_NEUCR Polyadenylation factor subunit 2 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=pfs-2 PE=3 SV=2
Length = 660
Score = 362 bits (929), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 178/402 (44%), Positives = 252/402 (62%), Gaps = 34/402 (8%)
Query: 2 RKLTQRRAVDYTSTVVRYMQIRM-WQRDSRDRTVLQATPAAAIDMLPTVAYTDNPSTSFA 60
R +R DY ++VV YM+ R R S V + +P+ +DMLP A NP+ S
Sbjct: 25 RNRGRRPVTDYGASVVHYMRHRQPRYRGSYAGEVERPSPSYIVDMLPPYARVTNPADSVP 84
Query: 61 AKFVHTSLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSM 120
++ +H+SLNK + IN V WTP GRRL+T S SGEFTLWNG FNFE I+QAHD AIR++
Sbjct: 85 SRHLHSSLNKIKHPINVVRWTPEGRRLLTASSSGEFTLWNGTGFNFETIMQAHDSAIRAL 144
Query: 121 VWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTV 180
V+SH+D+W+VS D G IKYWQ N NNV++ + H + +RDL+F D KF + SDD T+
Sbjct: 145 VYSHSDDWLVSADHDGIIKYWQPNFNNVESIR-GHTDPIRDLAFSPNDTKFVTASDDQTL 203
Query: 181 KVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHK 240
KV+DFA + +LTGHGWD KS DWHP++ L+VSG KD LVKLWD ++GR L + HGHK
Sbjct: 204 KVFDFAGGSTDMTLTGHGWDAKSCDWHPSRGLIVSGSKDHLVKLWDPRTGRCLTTLHGHK 263
Query: 241 NMVLCVKWNQ-NGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFV 299
N + + + GN + T+++DQ +++D+R M+++ RGH KD++ L WHP H
Sbjct: 264 NTITKTLFERVQGNCLATSARDQTARVFDLRMMRDIALLRGHEKDISTLTWHPVHSNLLS 323
Query: 300 SGSLDGSIFHWLVG----------------HET------------PQVEIHNVHDNTVWD 331
+G DGS+FH+L+ ++T P +I HD +W
Sbjct: 324 TGGSDGSLFHYLLDEPNTAPDGSVMPIPAVYDTADPSSAPAQPIYPAHKIPYAHDFAIWS 383
Query: 332 LAWHPIGYLLCSGSNDHTTKFWCRNRPG---DTARDKFNMGQ 370
L WHP+G++L SGSND T+FW R RPG ++ D++++G+
Sbjct: 384 LDWHPLGHILASGSNDRITRFWSRARPGEAPESFNDRYHIGE 425
>sp|Q9UTN4|PFS2_SCHPO Polyadenylation factor subunit 2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=pfs2 PE=4 SV=1
Length = 509
Score = 354 bits (909), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 200/508 (39%), Positives = 284/508 (55%), Gaps = 51/508 (10%)
Query: 1 MRKLTQRRAVDYTSTVVRYMQIRMWQRDSRDRTVLQATPAAAIDMLPTVAYTDNPSTSFA 60
++K RR VDY S + +Y+ R + + V + P I++ P Y N ++S
Sbjct: 10 IQKPMTRRTVDYGSGLSKYIVNRHLRSNRYHIHVPRPNPNQIINLYPPYEYKYNNTSSLC 69
Query: 61 AKFVHTSLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSM 120
K++HTS NK R IN V WTP GRRL+TGS +GEFTLWNG +FNFE+I Q+HD+A+R
Sbjct: 70 TKYIHTSANKARHVINVVRWTPDGRRLLTGSSTGEFTLWNGLTFNFELINQSHDYAVRCA 129
Query: 121 VWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTV 180
WS + W++SGD GG +KY++ N+NNVK + AH+ VRD++F D KF + SDD ++
Sbjct: 130 EWSTDGRWLISGDGGGMVKYFEPNLNNVKIVQ-AHEMEVRDVAFSPNDSKFVTASDDGSL 188
Query: 181 KVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHK 240
KVW+F EE LTGHGWDVK+VDWHP+K LL SG KD+LVK WD ++G + + HGHK
Sbjct: 189 KVWNFHMSTEELKLTGHGWDVKTVDWHPSKGLLASGSKDNLVKFWDPRTGTCIATLHGHK 248
Query: 241 NMVLCVKWNQN--GNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYF 298
N ++ + +N N++ T S+D +++D+RAMK++ RGH KDV + WHP +
Sbjct: 249 NTIMQASFQKNFGSNYLATVSRDSTCRVFDLRAMKDVRVLRGHEKDVNCVTWHPLYPNLL 308
Query: 299 VSGSLDGSIFHWLVG----------HET--------------PQVEIHNVHDNTVWDLAW 334
+G DGS+ H+ + HE P EI HD +W + +
Sbjct: 309 TTGGSDGSVNHYSLDEPPLLSQQKYHEKHPNVTLSASSYLLYPTAEIPFAHDLGIWSMQY 368
Query: 335 HPIGYLLCSGSNDHTTKFWCRNRPGD--TARDKFNMGQNQGYGEQNAVFAGRMPG----- 387
HP+G+LLC+GSND TT+FW R+RP D + D+ ++G+ Q A+ + R
Sbjct: 369 HPLGHLLCTGSNDKTTRFWSRSRPDDKESTMDRHHLGEEQS----EAMLSQRKAAIEEDD 424
Query: 388 NFPLPEGPTTPGPFAPGLTRNEGT--IPGVGVAMPLSIPSFDSSAQGEQKQP---LSMPL 442
N+ E P T + G +PG+G ++PSF S Q Q Q L L
Sbjct: 425 NYEPDENPLTETLANAHNPQFSGVLNLPGLG-----TMPSFPSPYQHGQPQIPGMLHASL 479
Query: 443 GAPPLPPGPHPSL---LTANQQQGYQQN 467
P S LT+ Q GY QN
Sbjct: 480 SNSYAEPSTQNSFIPGLTSKSQDGYPQN 507
>sp|P0CS47|PFS2_CRYNB Polyadenylation factor subunit 2 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=PFS2 PE=3 SV=1
Length = 713
Score = 348 bits (893), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 170/418 (40%), Positives = 248/418 (59%), Gaps = 5/418 (1%)
Query: 2 RKLTQRRAVDYTSTVVRYMQIRMWQRDSRDRTVLQATPAAAIDMLPTVAYTDNPSTSFAA 61
RK+ RR VDY V ++ + + R + P+ ++ LP VA NPSTS
Sbjct: 63 RKIKPRRTVDYQGGVQKWRMLNKLKGVHEFRPAIHPNPSDIVNFLPPVALRSNPSTSICD 122
Query: 62 KFVHTSLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMV 121
+VHTS+NK R V WTP RRL+TG+ G+FTLWNG SFN+E I Q HD +IRS
Sbjct: 123 YWVHTSINKERSPTRVVRWTPDARRLLTGNDKGQFTLWNGASFNYESITQVHDDSIRSFT 182
Query: 122 WSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVK 181
+SHN +VS D GG IKY+ ++ N+ + H+E+ D+S+ D +F +C DD VK
Sbjct: 183 YSHNGQALVSADKGGTIKYFTPHLTNIHGFQ-GHREACHDVSWSPNDERFVTCGDDGLVK 241
Query: 182 VWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKN 241
+W + +EERSL+GHGWDV+ VDWHPTK L+VSG KD LVK WD ++G++L + H K+
Sbjct: 242 IWSYREAKEERSLSGHGWDVRCVDWHPTKGLIVSGSKDMLVKFWDPRTGKDLSTLHSSKS 301
Query: 242 MVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSG 301
+ +W+ +G+ V TA +D +I+L+DIR +ELE +GH K+V + WHP H VSG
Sbjct: 302 TINTCRWSPDGHLVATAGQDSVIRLFDIRTFRELEVLKGHEKEVNCIEWHPIHHSLLVSG 361
Query: 302 SLDGSIFHWLVGHETPQVEIHNV---HDNTVWDLAWHPIGYLLCSGSNDHTTKFWCRNR- 357
G+I ++ + TP I + H++ V+ L++HP+G++LCSGS D T +FWCR R
Sbjct: 362 DALGTINYFSLLSPTPSTPITTLSAAHEDAVFSLSFHPLGHILCSGSKDFTARFWCRARP 421
Query: 358 PGDTARDKFNMGQNQGYGEQNAVFAGRMPGNFPLPEGPTTPGPFAPGLTRNEGTIPGV 415
PG DK+++ + ++ R G LP G G + + +PG+
Sbjct: 422 PGGQEFDKWHLTEEGAAQKELERITKREWGTNALPANAAGGGGGGGGGDKQQVALPGL 479
>sp|P0CS46|PFS2_CRYNJ Polyadenylation factor subunit 2 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=PFS2 PE=3 SV=1
Length = 712
Score = 345 bits (885), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 162/373 (43%), Positives = 234/373 (62%), Gaps = 5/373 (1%)
Query: 2 RKLTQRRAVDYTSTVVRYMQIRMWQRDSRDRTVLQATPAAAIDMLPTVAYTDNPSTSFAA 61
RK+ RR VDY V ++ + + R + P+ ++ LP VA NPSTS
Sbjct: 63 RKIKPRRTVDYQGGVQKWRMLNKLKGVHEFRPAIHPNPSDIVNFLPPVALRSNPSTSICD 122
Query: 62 KFVHTSLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMV 121
+VHTS+NK R V WTP RRL+TG+ G+FTLWNG SFN+E I Q HD +IRS
Sbjct: 123 YWVHTSINKERSPTRVVRWTPDARRLLTGNDKGQFTLWNGASFNYESITQVHDDSIRSFT 182
Query: 122 WSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVK 181
+SHN +VS D GG IKY+ ++ N+ + H+E+ D+S+ D +F +C DD VK
Sbjct: 183 YSHNGQALVSADKGGTIKYFTPHLTNIHGFQ-GHREACHDVSWSPNDERFVTCGDDGLVK 241
Query: 182 VWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKN 241
+W + +EERSL+GHGWDV+ VDWHPTK L+VSG KD LVK WD ++G++L + H K+
Sbjct: 242 IWSYREAKEERSLSGHGWDVRCVDWHPTKGLIVSGSKDMLVKFWDPRTGKDLSTLHSSKS 301
Query: 242 MVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSG 301
+ +W+ +G+ V TA +D +I+L+DIR +ELE +GH K+V + WHP H VSG
Sbjct: 302 TINTCRWSPDGHLVATAGQDSVIRLFDIRTFRELEVLKGHEKEVNCIEWHPIHHSLLVSG 361
Query: 302 SLDGSIFHWLVGHETPQVEIHNV---HDNTVWDLAWHPIGYLLCSGSNDHTTKFWCRNR- 357
G+I ++ + TP I + H++ V+ L++HP+G++LCSGS D T +FWCR R
Sbjct: 362 DALGTINYFSLLSPTPSTPITTLSAAHEDAVFSLSFHPLGHILCSGSKDFTARFWCRARP 421
Query: 358 PGDTARDKFNMGQ 370
PG DK+++ +
Sbjct: 422 PGGQEFDKWHLTE 434
>sp|Q4I7X1|PFS2_GIBZE Polyadenylation factor subunit 2 OS=Gibberella zeae (strain PH-1 /
ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=PFS2 PE=3
SV=1
Length = 612
Score = 342 bits (877), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 163/357 (45%), Positives = 229/357 (64%), Gaps = 30/357 (8%)
Query: 43 IDMLPTVAYTDNPSTSFAAKFVHTSLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQ 102
+DMLP A + S K +H+SLNK + IN V WTP GRRL+T S SGEFTLWNG
Sbjct: 66 VDMLPPAARVTKAADSIPIKHLHSSLNKIKHPINVVRWTPEGRRLLTASTSGEFTLWNGT 125
Query: 103 SFNFEMILQAHDHAIRSMVWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDL 162
FNFE I+QAHD AIR++ +SH+D+W++S D GA+KYWQ N NNV++ +AH + +RDL
Sbjct: 126 GFNFETIMQAHDSAIRALEYSHSDDWLISADHDGAVKYWQPNFNNVQS-INAHTDPIRDL 184
Query: 163 SFCRTDLKFCSCSDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLV 222
+F +D KF + SDD+T+K++DFA Q E L GHGWD KSVDWHPTK LLVSG KD LV
Sbjct: 185 AFSPSDSKFVTASDDSTLKIFDFALGQMESKLEGHGWDAKSVDWHPTKGLLVSGSKDHLV 244
Query: 223 KLWDAKSGRELCSFHGHKNMVLCVKWNQ-NGNWVLTASKDQIIKLYDIRAMKELESFRGH 281
KLWD ++ R L + HGHK+ + V + + G + T+++DQ +++D+R M+++ +GH
Sbjct: 245 KLWDPRTSRCLTTLHGHKSTITKVLFEKVRGACLATSARDQTARVFDLRMMRDICLLKGH 304
Query: 282 RKDVTALAWHPFHEEYFVSGSLDGSIFHWLVGHET------------------------- 316
KD++ L WHP H +G +DGS+FH+L+
Sbjct: 305 EKDISTLTWHPVHPNLLSTGGMDGSLFHYLLDSPNPPPGQSFTVAPYDSPDPTTVPAQSV 364
Query: 317 -PQVEIHNVHDNTVWDLAWHPIGYLLCSGSNDHTTKFWCRNRPGDTA--RDKFNMGQ 370
P ++ HD +W L WHP+G++L SGSND T+FW R RPGD +D++++G+
Sbjct: 365 WPTHKVPYAHDYAIWSLDWHPLGHILASGSNDRITRFWSRARPGDAEVFQDRYHIGE 421
>sp|Q2TZG4|PFS2_ASPOR Polyadenylation factor subunit 2 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=pfs2 PE=3 SV=1
Length = 610
Score = 331 bits (848), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 161/404 (39%), Positives = 238/404 (58%), Gaps = 34/404 (8%)
Query: 7 RRAVDYTSTVVRYMQIRMWQRDSRDRTVLQATPAAAI-DMLPTVAYTDNPSTSFAAKFVH 65
R DY S++V++M+ R + R + A+ I DMLP +A +P + + +H
Sbjct: 32 RLVTDYGSSLVQWMRTRRPRYKGGHRMETERPSASYIVDMLPPLARIHSPVDTIPVRHLH 91
Query: 66 TSLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAH----DHAIRSMV 121
S+ K++ I V WTP GRRL+TG +GEF LWNG +FNFE ++ AH + S+
Sbjct: 92 QSIGKSKKPITVVRWTPEGRRLLTGGHTGEFMLWNGTAFNFETVMDAHYDQLQAGVTSLA 151
Query: 122 WSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVK 181
WSH+ +W++SG G IKYW+ N NNV+ AH ++VRDL++ +D KF S SDDTT+K
Sbjct: 152 WSHSHDWLISGGQKGDIKYWRPNFNNVETIDDAHHDAVRDLAWSPSDTKFLSASDDTTLK 211
Query: 182 VWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKN 241
++DF + LTGH WDVKS DWHPTK LLVSG KD VK WD ++ R L + H HKN
Sbjct: 212 IFDFTSRTADTVLTGHNWDVKSCDWHPTKGLLVSGSKDHQVKFWDPRTARCLTTLHSHKN 271
Query: 242 MVLCVKWNQ-NGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVS 300
V ++++ N N + T+S+DQ +++D+R M+++ RGH K V++L WHP H +
Sbjct: 272 TVTATRFSRVNQNLLATSSRDQTARVFDLRMMRDICILRGHEKPVSSLTWHPIHSSLIST 331
Query: 301 GSLDGSIFHWLVGHET--------------------------PQVEIHNVHDNTVWDLAW 334
GS DGS++H+L+ P + H T+W L W
Sbjct: 332 GSEDGSLYHYLLDEPNVPSGQIPTIAPYDSPDPANTPAQVIYPAHRVQYAHSATIWSLDW 391
Query: 335 HPIGYLLCSGSNDHTTKFWCRNRPGDTA--RDKFNMGQNQGYGE 376
HP+G++L SGS D+ T+FW R RPG+T+ +D+F++G+ +
Sbjct: 392 HPLGHILASGSKDNFTRFWSRARPGETSYMKDRFHIGEEAAEAQ 435
>sp|Q6BVZ3|PFS2_DEBHA Polyadenylation factor subunit 2 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=PFS2 PE=3 SV=2
Length = 504
Score = 309 bits (791), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 173/455 (38%), Positives = 246/455 (54%), Gaps = 41/455 (9%)
Query: 2 RKLTQRRAVDYTSTVVRYMQIRMWQRDSRDRTVLQATPAAAIDMLPTVAYTDNPS----- 56
+K RR VD+ + + R+ R D + ++ + ID+LP+ AY N
Sbjct: 43 KKTAYRRTVDHGNNMGRWYINRSLGIDDQPIGKIRPESSYLIDLLPSPAYASNSVRENKN 102
Query: 57 ----TSFAAKFVHTSLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQA 112
KFVH S NK + SIN V WTP GRRL+ S SGEFT+WNG +FNFE I+QA
Sbjct: 103 NMSIMDIQTKFVHLSSNKAKHSINTVKWTPEGRRLLVASHSGEFTVWNGMTFNFETIMQA 162
Query: 113 HDHAIRSMVWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFC 172
HD AI S+ +SHND W++SGD G IKYWQ N NNV + H + +RD++F D KF
Sbjct: 163 HDSAILSLKYSHNDEWLLSGDQSGVIKYWQTNFNNVNI-INGHSDGIRDIAFSPNDSKFL 221
Query: 173 SCSDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRE 232
+CSDD+T+K+W+F QEERSL GH WDVKS DWHP L+VSG KD+L+KLWD ++
Sbjct: 222 TCSDDSTMKIWNFNNGQEERSLVGHHWDVKSADWHPNLGLIVSGSKDNLIKLWDPRASSC 281
Query: 233 LCSFHGHKNMVLCVKWNQNGNWVLTA--SKDQIIKLYDIRAMKELESFRGHRKDVTALAW 290
+ + HG K+ + K+ G L A S+D+ +++D+R MK++ R H D++ + W
Sbjct: 282 VSTLHGFKHTITKTKFQPTGTKRLLASVSRDKSCRIFDLRTMKDILVIRDHETDLSCVEW 341
Query: 291 HPFHEEYFVSGSLDGSIFHWLVG---------------HETPQVEIHNV---HDNTVWDL 332
HP H + + DGS+ H+++ +P H + H+ + L
Sbjct: 342 HPVHPSMITTAAYDGSMNHYIMDSYISDNNIKNDSNNNSTSPIEASHKIPYAHEKAIHAL 401
Query: 333 AWHPIGYLLCSGSNDHTTKFWCRNRPGD--TARDKFNMGQNQG---YGEQNAVFAGRMPG 387
+HP+G+LLCS D + +FW R RP D + +D G YG N + A P
Sbjct: 402 EYHPLGHLLCSAGADRSARFWSRARPNDPMSFQDALYTNDKVGAWYYGVNNNINAVIEPS 461
Query: 388 NFPL-PEGPTTPGPF-APGLTR----NEGTIPGVG 416
+ + P++ PGL NE T G G
Sbjct: 462 TASVNKDDPSSAQAINLPGLNNLPNGNESTTNGWG 496
>sp|Q75AV4|PFS2_ASHGO Polyadenylation factor subunit 2 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=PSF2
PE=3 SV=1
Length = 449
Score = 301 bits (771), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 156/367 (42%), Positives = 226/367 (61%), Gaps = 12/367 (3%)
Query: 2 RKLTQRRAVDYTSTVVRYMQIRMWQRDSRDRTVLQATPAAAIDMLPTVAYTDNPST-SFA 60
+ ++QRR VD +S Y ++ +++ + +Q D++P AY D+ +
Sbjct: 11 KYVSQRRTVDMSSP---YDRLYFYKKHAIPLRTIQPESTYTADIMPPDAYRDHRRVLNIP 67
Query: 61 AKFVHTSLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSM 120
KF H S NK + I + WTP GRRL+ + SGEF+LWNG SFNFE I+QAHD A+ M
Sbjct: 68 TKFTHLSSNKVKHVIPAITWTPEGRRLVVATYSGEFSLWNGSSFNFESIMQAHDSAVTVM 127
Query: 121 VWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTV 180
+SH +W++SGD G IK WQ N N VK AH E +RD+SF +D KF +CSDD +
Sbjct: 128 QYSHAGDWLISGDADGTIKIWQPNFNMVKVLDRAHTECMRDISFSYSDQKFVTCSDDNVL 187
Query: 181 KVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHK 240
K+W+F+ Q+ER L+GH WDVKS DWHP L+VSG KD+L+KLWD ++GR + + G K
Sbjct: 188 KIWNFSNGQQERVLSGHHWDVKSCDWHPKMGLIVSGSKDNLIKLWDPRTGRNVSTILGLK 247
Query: 241 NMVLCVKWN-QNGNWVLTASKDQIIKLYDIRA-MKELESFRGHRKDVTALAWHPFHEEYF 298
+ V+ K+ GN + SKD+ IK+YD+R M+EL++ R D +L+WHP +E F
Sbjct: 248 HTVIKTKFQPTQGNLLAVVSKDKSIKIYDMRQHMRELQTIRDDM-DYMSLSWHPINETIF 306
Query: 299 VSGSLDGSIFHWLVGHE----TPQVE-IHNVHDNTVWDLAWHPIGYLLCSGSNDHTTKFW 353
G +G+I H+ + H+ TP I H+ +V LA+ P+G++L S + D T +FW
Sbjct: 307 SVGCYNGAIKHFDLLHDNSNSTPACHTIPYAHEKSVTSLAYSPVGHILASAAKDRTIRFW 366
Query: 354 CRNRPGD 360
R+RP D
Sbjct: 367 ARSRPVD 373
>sp|Q5AZX0|PFS2_EMENI Polyadenylation factor subunit 2 OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=pfs2 PE=3 SV=1
Length = 567
Score = 298 bits (762), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 154/400 (38%), Positives = 225/400 (56%), Gaps = 53/400 (13%)
Query: 7 RRAVDYTSTVVRYMQIRMWQRDSRDRTVLQATPAA-AIDMLPTVAYTDNPSTSFAAKFVH 65
R DY S++V++M+ R + R + A+ +DMLP +A +P S + +H
Sbjct: 28 RLVTDYGSSMVQWMRNRRPKYQGGHRMETERPSASYMVDMLPPLARIHSPVDSIPVRHLH 87
Query: 66 TSLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHN 125
S+ K++ I V WTP GRRL+TG +GEF LWNG +FNFE ++
Sbjct: 88 QSIGKSKKPITVVRWTPEGRRLLTGGHTGEFMLWNGTAFNFETVM--------------- 132
Query: 126 DNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDF 185
D G +KYW+ N NNV+ AH ++VRDL++ +D KF S SDDTT+K++DF
Sbjct: 133 --------DKGDVKYWRPNFNNVETIDDAHHDAVRDLAWSPSDTKFLSASDDTTLKIYDF 184
Query: 186 ARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLC 245
+ LTGH WDVKS DWHPTK LLVSG KD VK WD ++ R L + H HKN V
Sbjct: 185 TARTCDTVLTGHNWDVKSCDWHPTKGLLVSGSKDHQVKFWDPRTARCLTTLHSHKNTVTA 244
Query: 246 VKWNQ-NGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLD 304
K+++ N N + T+S+DQ +++D+R M+++ RGH K ++ L WHP H +GS D
Sbjct: 245 TKFSRVNNNLLATSSRDQTARVFDLRMMRDICILRGHEKPISTLTWHPVHCSLISTGSED 304
Query: 305 GSIFHWLVGH------ETPQV--------------------EIHNVHDNTVWDLAWHPIG 338
GS++H+L+ + P V I H T+W L WHP+G
Sbjct: 305 GSLYHYLLDEPNLPAGQIPTVAPYDSPDPANTPAQVIYPAHRIQYAHAATIWTLDWHPLG 364
Query: 339 YLLCSGSNDHTTKFWCRNRPGDTA--RDKFNMGQNQGYGE 376
++L SGS D+ T+FW R RPG+T+ +D+F++G+ +
Sbjct: 365 HILASGSKDNFTRFWSRARPGETSYLKDRFHIGEEAAEAQ 404
>sp|Q4X1Y0|PFS2_ASPFU Polyadenylation factor subunit 2 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=pfs2
PE=3 SV=1
Length = 510
Score = 292 bits (747), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 141/361 (39%), Positives = 207/361 (57%), Gaps = 48/361 (13%)
Query: 45 MLPTVAYTDNPSTSFAAKFVHTSLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSF 104
MLP +A +P+ + + +H S+ K++ I V WTP GRRL+TG +GEF LWNG +F
Sbjct: 1 MLPPLARIHSPADTIPVRHLHQSIGKSKKPITVVRWTPEGRRLLTGGHTGEFMLWNGTAF 60
Query: 105 NFEMILQAHDHAIRSMVWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSF 164
NFE ++ G IKYW+ N NNV+ AH ++VRDL++
Sbjct: 61 NFETVMDVRGQK-------------------GDIKYWRPNFNNVETIDDAHHDAVRDLAW 101
Query: 165 CRTDLKFCSCSDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKL 224
+D KF S SDDTT+K++DF + LTGH WDVKS DWHPTK LLVSG KD VK
Sbjct: 102 SPSDTKFLSASDDTTLKIFDFTARTADTVLTGHNWDVKSCDWHPTKGLLVSGSKDHQVKF 161
Query: 225 WDAKSGRELCSFHGHKNMVLCVKWNQ-NGNWVLTASKDQIIKLYDIRAMKELESFRGHRK 283
WD ++ R L + H HKN V ++++ N N + T+S+DQ +++D+R M+++ RGH K
Sbjct: 162 WDPRTARCLTTLHSHKNTVTTTRFSRVNSNLLATSSRDQTARVFDLRMMRDICILRGHEK 221
Query: 284 DVTALAWHPFHEEYFVSGSLDGSIFHWLVGH------ETPQV------------------ 319
+++L WHP H +GS DGS++H+L+ + P +
Sbjct: 222 PISSLTWHPIHSSLISTGSEDGSLYHYLLDEPNLPSGQVPTIAPYDSPDPANTPAQVIYP 281
Query: 320 --EIHNVHDNTVWDLAWHPIGYLLCSGSNDHTTKFWCRNRPGDTA--RDKFNMGQNQGYG 375
I H T+W L WHP+G++L SGS D+ T+FW R RPG+T+ +D+F++G+
Sbjct: 282 AHRIQYAHSATIWSLDWHPLGHILASGSKDNFTRFWSRARPGETSYMKDRFHIGEEAAEA 341
Query: 376 E 376
+
Sbjct: 342 Q 342
>sp|P42841|PFS2_YEAST Polyadenylation factor subunit 2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=PFS2 PE=1 SV=1
Length = 465
Score = 291 bits (744), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 168/445 (37%), Positives = 245/445 (55%), Gaps = 33/445 (7%)
Query: 2 RKLTQRRAVDYTSTVVRYMQIRMWQRDSRDRTVLQATPAAAIDMLPTVAYT-DNPSTSFA 60
+ +TQRR+VD +S Y+ + +R V++ + ID++P AY + +
Sbjct: 25 KYVTQRRSVDVSSP---YINLYYNRRHGLPNLVVEPETSYTIDIMPPNAYRGRDRVINLP 81
Query: 61 AKFVHTSLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSM 120
+KF H S NK + I + WTP GRRL+ + SGEF+LWN SF FE ++QAHD A+ +M
Sbjct: 82 SKFTHLSSNKVKHVIPAIQWTPEGRRLVVATYSGEFSLWNASSFTFETLMQAHDSAVTTM 141
Query: 121 VWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTV 180
+SH+ +WM+SGD G IK WQ N + VK +AH ES+RD++F D KF +CSDD +
Sbjct: 142 KYSHDSDWMISGDADGMIKIWQPNFSMVKEIDAAHTESIRDMAFSSNDSKFVTCSDDNIL 201
Query: 181 KVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHK 240
K+W+F+ ++ER L+GH WDVKS DWHP L+ S KD+LVKLWD +SG + S K
Sbjct: 202 KIWNFSNGKQERVLSGHHWDVKSCDWHPEMGLIASASKDNLVKLWDPRSGNCISSILKFK 261
Query: 241 NMVLCVKWN-QNGNWVLTASKDQIIKLYDIR-AMKELESFRGHRKDVTALAWHPFHEEYF 298
+ VL ++ GN ++ SKD+ +++DIR +MKEL R D L WHP +E F
Sbjct: 262 HTVLKTRFQPTKGNLLMAISKDKSCRVFDIRYSMKELMCVRD-ETDYMTLEWHPINESMF 320
Query: 299 VSGSLDGSIFHW--LVGHETPQVEIHNVHDNTVWDLAWHPIGYLLCSGSNDHTTKFWCRN 356
DGS+ H+ L P + I HD + L+++P+G++ + + D T +FW R
Sbjct: 321 TLACYDGSLKHFDLLQNLNEPILTIPYAHDKCITSLSYNPVGHIFATAAKDRTIRFWTRA 380
Query: 357 RPGD-TARDK--FNMGQNQG--YGEQNAVFAGRMPGNF-PLPEGPTTPGPFA-------- 402
RP D A D +N + G +G N + A R F P P T P A
Sbjct: 381 RPIDPNAYDDPTYNNKKINGWFFGINNDINAVREKSEFGAAPPPPATLEPHALPNMNGFI 440
Query: 403 --------PGLTRN--EGTIPGVGV 417
PG+ N T+PG+ +
Sbjct: 441 NKKPRQEIPGIDSNIKSSTLPGLSI 465
>sp|Q6CP71|PFS2_KLULA Polyadenylation factor subunit 2 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=PFS2 PE=3 SV=1
Length = 452
Score = 289 bits (740), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 155/366 (42%), Positives = 216/366 (59%), Gaps = 10/366 (2%)
Query: 2 RKLTQRRAVDYTSTVVRYMQIRMWQRDSRDRTVLQATPAAAIDMLPTVAY-TDNPSTSFA 60
+ +QRR +D +++ R ++ + + + ++A + +LP AY + + A
Sbjct: 12 KYTSQRRTIDISASYDRLYFLK--KHGQENSSYIEAETSYNAHILPPDAYGFHGHAINTA 69
Query: 61 AKFVHTSLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSM 120
KF H S NK + I + WTP GRRL+ + +GEF+LW+G SFNFE I+QAHD A+ M
Sbjct: 70 TKFTHLSSNKVKHVIPALTWTPEGRRLVVATYNGEFSLWSGSSFNFESIMQAHDSAVTVM 129
Query: 121 VWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTV 180
+SH +WMVSG G +K WQ N N VK AH E VR++SF TD KF SCSDD +
Sbjct: 130 TYSHTGDWMVSGSADGELKIWQPNFNMVKVMDQAHMECVREISFSPTDQKFVSCSDDNVL 189
Query: 181 KVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHK 240
K+W+F+ Q+ER L+GH WDVKS DWHP L+VSG KD+L+K WD +SG + + G K
Sbjct: 190 KIWNFSNGQQERVLSGHHWDVKSCDWHPKMGLIVSGSKDNLIKFWDPRSGSCVSTMLGFK 249
Query: 241 NMVLCVKWN-QNGNWVLTASKDQIIKLYDIR-AMKELESFRGHRKDVTALAWHPFHEEYF 298
+ ++ K+ + GN + SKD+ K+YDIR KEL S R D L WHP E F
Sbjct: 250 HTIISTKFQPKQGNLLSVISKDKTCKVYDIRQQAKELFSVRD-DVDYMTLQWHPIDETVF 308
Query: 299 VSGSLDGSIFHWLVGHET-PQVEIHNV---HDNTVWDLAWHPIGYLLCSGSNDHTTKFWC 354
G DGSI H+ + E P HN+ H+ V LA+ PIG+++ S S D T +FW
Sbjct: 309 TVGCYDGSIKHFDLSQENQPNKPTHNIPYAHEKCVTSLAYSPIGHIMASASKDRTIRFWT 368
Query: 355 RNRPGD 360
R+R D
Sbjct: 369 RSRAVD 374
>sp|Q59WJ4|PFS2_CANAL Polyadenylation factor subunit 2 OS=Candida albicans (strain SC5314
/ ATCC MYA-2876) GN=PFS2 PE=3 SV=1
Length = 543
Score = 289 bits (739), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 151/402 (37%), Positives = 227/402 (56%), Gaps = 44/402 (10%)
Query: 2 RKLTQRRAVDYTSTVVR-YMQIRMWQRDSRDRTVLQATPAAA--IDMLPTVAYTDN---- 54
+K RR D+ + + R Y++ + + + + P ++ ID+LP++AY+ +
Sbjct: 50 KKQAYRRITDHGNNMGRWYIEKSLGLTNRSQQAIGTIRPESSYLIDLLPSLAYSSSFNLN 109
Query: 55 --------PSTSFAAKFVHTSLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNF 106
KFVH S NK + +IN V WTP GRRL+ S SGEFTLWNG +FNF
Sbjct: 110 RRNNKNNLAVLDLQTKFVHLSSNKVKHTINTVKWTPEGRRLLVASHSGEFTLWNGMTFNF 169
Query: 107 EMILQAHDHAIRSMVWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCR 166
E I+QAH+ I +M +S++D W++SGD G +KYWQ N NNV N SAH VRD++F
Sbjct: 170 ETIMQAHESPILTMKYSNHDEWLLSGDQNGTVKYWQPNFNNVN-NISAHANGVRDIAFSP 228
Query: 167 TDLKFCSCSDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWD 226
D KF +C DD+ +K+W+F +EER+L+GH W+VKS DWHP L+VSG KD+LVKLWD
Sbjct: 229 NDSKFLTCGDDSAIKIWNFNNGKEERTLSGHHWEVKSADWHPNLGLIVSGSKDNLVKLWD 288
Query: 227 AKSGRELCSFHGHKNMVLCVKWNQNGNWVLTA--SKDQIIKLYDIRAMKELESFRGHRKD 284
+S + + HG K+ V ++ NG L A S+D+ +++D+R MK++ R D
Sbjct: 289 PRSANCVSTLHGFKHTVNKTRFQPNGTARLLASVSRDRSCRIFDLRTMKDMLVIRDSETD 348
Query: 285 VTALAWHPFHEEYFVSGSLDGSIFHWLVGHETPQV------------------------- 319
++ +AWHP H + + +GSI ++L+ P
Sbjct: 349 LSCVAWHPIHASMVTTAAYNGSISNFLLDSYIPDSNESVPKRSNNNSNLSTNTNNTIDAV 408
Query: 320 -EIHNVHDNTVWDLAWHPIGYLLCSGSNDHTTKFWCRNRPGD 360
+I H+ + + +HP+G+LLC+ +D T +FW R RP D
Sbjct: 409 QKIPYAHEKAIHAVEYHPLGHLLCTAGSDKTARFWSRARPND 450
>sp|Q6CGP9|PFS2_YARLI Polyadenylation factor subunit 2 OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=PFS2 PE=3 SV=1
Length = 532
Score = 288 bits (737), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 164/421 (38%), Positives = 233/421 (55%), Gaps = 50/421 (11%)
Query: 2 RKLTQRRAVDYTSTVVRYMQIRMWQRDSRDRTVLQATPAAAIDMLPTVAYTD-------- 53
R+ RR VD+ S ++ R+ R + +++ + +D+LP AYT+
Sbjct: 64 RRPAHRRTVDHGSAFGKWHLDRLSGRTIQPAN-MRSEQSYIVDLLPPSAYTNINGSLRST 122
Query: 54 NPS-TSFAA---KFVHTSLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMI 109
NP TS AA KF+ +LNK R + WTP GRRL+TGS SGEFTLWNG +FNFE I
Sbjct: 123 NPHITSVAATPAKFIQVALNKVRHPVYSATWTPDGRRLLTGSMSGEFTLWNGMTFNFESI 182
Query: 110 LQAHDHAIRSMVWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDL 169
+QAH+ +RS+ +SH+ W++SGD G +K+WQ ++N V AH+ES+R+L+F +D
Sbjct: 183 MQAHESGVRSLKYSHSGEWLLSGDHEGNVKFWQPSLNCVNVIDKAHRESIRELAFAPSDH 242
Query: 170 KFCSCSDDTTVKVWDF-ARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAK 228
KF + SDD +K+WDF E L GHGWDVKSVDWH L+VSG KD+L+KLWD +
Sbjct: 243 KFVTGSDDGLLKIWDFHESSNAESVLKGHGWDVKSVDWHSELGLIVSGSKDNLIKLWDPR 302
Query: 229 SGRELCSFHGHKNMVLCVKWNQNGNWVLTAS--KDQIIKLYDIRAM-------------- 272
S + + +FHG KN V+ + G L A+ +D+ ++ D+R +
Sbjct: 303 SAKNVNTFHGFKNTVMKTTFQPTGTKRLLAAGCRDRTCRILDLRMLNSGSSEAGPTAGTD 362
Query: 273 ------KELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFHWLVGHE----------- 315
+ + RGH DV +L WHP H SG+ GSI+ + V
Sbjct: 363 MPTRGDRSMAVLRGHDSDVFSLTWHPTHANVVTSGTKTGSIYTFNVDTTPAGGAYGPDSG 422
Query: 316 -TPQVEIHNVHDNTVWDLAWHPIGYLLCSGSNDHTTKFWCRNRPGD--TARDKFNMGQNQ 372
P I + HD V L +HP G++LCSG D T+FW R RPGD + RDK+ + +
Sbjct: 423 ILPVNTIPSAHDYCVSTLDYHPEGHVLCSGGLDRMTRFWARPRPGDPTSFRDKYYEPKEE 482
Query: 373 G 373
G
Sbjct: 483 G 483
>sp|Q6FJS0|PFS2_CANGA Polyadenylation factor subunit 2 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=PFS2 PE=3 SV=1
Length = 455
Score = 276 bits (705), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 145/365 (39%), Positives = 216/365 (59%), Gaps = 11/365 (3%)
Query: 2 RKLTQRRAVDYTSTVVRYMQIRMWQRDSRDRTVLQATPAAAIDMLPTVAYTDNPS-TSFA 60
+ LT RR+VD +S+ Y ++ ++ ++ + +++P AY N +
Sbjct: 14 KYLTLRRSVDVSSS---YNRLYYLKKHGLSLPPIEPETSFTANIMPPDAYKRNDRIVNLP 70
Query: 61 AKFVHTSLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSM 120
KF H S NK + I + W+P GRRLI + SGEF+LWNG SF FE I+QAHD ++ +M
Sbjct: 71 TKFTHLSSNKVKHVIPAIQWSPEGRRLIVATFSGEFSLWNGSSFTFETIMQAHDTSVTTM 130
Query: 121 VWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTV 180
+SH +WM+SGD G IK WQ N N VK H E +RD++F D KF +CSDD +
Sbjct: 131 KYSHAGDWMISGDADGTIKIWQPNFNMVKELDRIHTEGIRDVAFSNNDSKFVTCSDDNIL 190
Query: 181 KVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHK 240
K+W+F+ Q+ER L+GH WDV+S DWHP L+VSG KD+LVKLWD +SG+ + + K
Sbjct: 191 KIWNFSNGQQERVLSGHHWDVRSCDWHPELGLIVSGSKDNLVKLWDPRSGQCVSTLLKFK 250
Query: 241 NMVLCVKWN-QNGNWVLTASKDQIIKLYDIRA-MKELESFRGHRKDVTALAWHPFHEEYF 298
+ VL ++ GN + SKD+ +++D+RA M EL R D L W +E F
Sbjct: 251 HTVLKTRFQPTKGNLLAAISKDKSCRVFDLRASMNELMCVRDE-VDFMELEWSTINESMF 309
Query: 299 VSGSLDGSIFHWLVGHETPQVEIHNV---HDNTVWDLAWHPIGYLLCSGSNDHTTKFWCR 355
G DGS+ H+ +G +T + IH + H+ + +A++P+G++L + + D T +FW R
Sbjct: 310 TVGCYDGSLKHFDLGQDTEK-PIHIIPFAHEKCISAIAYNPVGHILATAAKDRTIRFWTR 368
Query: 356 NRPGD 360
RP D
Sbjct: 369 ARPVD 373
>sp|P49695|PKWA_THECU Probable serine/threonine-protein kinase PkwA OS=Thermomonospora
curvata GN=pkwA PE=3 SV=1
Length = 742
Score = 122 bits (307), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 115/241 (47%), Gaps = 2/241 (0%)
Query: 75 INRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGDD 134
+ V ++P G L +GS LW+ + + + H H + + +S + + + SG
Sbjct: 504 VRAVAFSPDGALLASGSDDATVRLWDVAAAEERAVFEGHTHYVLDIAFSPDGSMVASGSR 563
Query: 135 GGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERSL 194
G + W A H + V ++F S S D T+++WD A +E L
Sbjct: 564 DGTARLWNVATGTEHAVLKGHTDYVYAVAFSPDGSMVASGSRDGTIRLWDVATGKERDVL 623
Query: 195 TGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQNGNW 254
+V S+ + P S+LV G DS V LWD SG L +F GH + V V ++ +G
Sbjct: 624 QAPAENVVSLAFSPDGSMLVH-GSDSTVHLWDVASGEALHTFEGHTDWVRAVAFSPDGAL 682
Query: 255 VLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFHWLVGH 314
+ + S D+ I+L+D+ A +E + GH + V ++A+HP S S DG+I W +
Sbjct: 683 LASGSDDRTIRLWDVAAQEEHTTLEGHTEPVHSVAFHP-EGTTLASASEDGTIRIWPIAT 741
Query: 315 E 315
E
Sbjct: 742 E 742
Score = 116 bits (291), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 118/256 (46%), Gaps = 3/256 (1%)
Query: 98 LWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKE 157
+W+ S + L+ H +R++ +S + + SG D ++ W +A H
Sbjct: 485 VWDVASGDELHTLEGHTDWVRAVAFSPDGALLASGSDDATVRLWDVAAAEERAVFEGHTH 544
Query: 158 SVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGG 217
V D++F S S D T ++W+ A E L GH V +V + P S++ SG
Sbjct: 545 YVLDIAFSPDGSMVASGSRDGTARLWNVATGTEHAVLKGHTDYVYAVAFSPDGSMVASGS 604
Query: 218 KDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELES 277
+D ++LWD +G+E V+ + ++ +G+ +L D + L+D+ + + L +
Sbjct: 605 RDGTIRLWDVATGKERDVLQAPAENVVSLAFSPDGS-MLVHGSDSTVHLWDVASGEALHT 663
Query: 278 FRGHRKDVTALAWHPFHEEYFVSGSLDGSIFHWLVGHETPQVEIHNVHDNTVWDLAWHPI 337
F GH V A+A+ P SGS D +I W V + + H V +A+HP
Sbjct: 664 FEGHTDWVRAVAFSP-DGALLASGSDDRTIRLWDVAAQEEHTTLEG-HTEPVHSVAFHPE 721
Query: 338 GYLLCSGSNDHTTKFW 353
G L S S D T + W
Sbjct: 722 GTTLASASEDGTIRIW 737
Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 104/218 (47%), Gaps = 7/218 (3%)
Query: 138 IKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERSLTGH 197
I W + H + VR ++F S SDD TV++WD A +E GH
Sbjct: 483 IHVWDVASGDELHTLEGHTDWVRAVAFSPDGALLASGSDDATVRLWDVAAAEERAVFEGH 542
Query: 198 GWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQNGNWVLT 257
V + + P S++ SG +D +LW+ +G E GH + V V ++ +G+ V +
Sbjct: 543 THYVLDIAFSPDGSMVASGSRDGTARLWNVATGTEHAVLKGHTDYVYAVAFSPDGSMVAS 602
Query: 258 ASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFHWLVGHETP 317
S+D I+L+D+ KE + + ++V +LA+ P V GS D ++ W V
Sbjct: 603 GSRDGTIRLWDVATGKERDVLQAPAENVVSLAFSP-DGSMLVHGS-DSTVHLWDVASGE- 659
Query: 318 QVEIHNVHDNTVW--DLAWHPIGYLLCSGSNDHTTKFW 353
+H +T W +A+ P G LL SGS+D T + W
Sbjct: 660 --ALHTFEGHTDWVRAVAFSPDGALLASGSDDRTIRLW 695
Score = 79.7 bits (195), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 1/161 (0%)
Query: 65 HTSLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSH 124
H L + + V ++P G + +GS+ G LW+ + +LQA + S+ +S
Sbjct: 578 HAVLKGHTDYVYAVAFSPDGSMVASGSRDGTIRLWDVATGKERDVLQAPAENVVSLAFSP 637
Query: 125 NDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWD 184
+ + +V G D + W H + VR ++F S SDD T+++WD
Sbjct: 638 DGSMLVHGSD-STVHLWDVASGEALHTFEGHTDWVRAVAFSPDGALLASGSDDRTIRLWD 696
Query: 185 FARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLW 225
A +E +L GH V SV +HP + L S +D +++W
Sbjct: 697 VAAQEEHTTLEGHTEPVHSVAFHPEGTTLASASEDGTIRIW 737
>sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1
Length = 1526
Score = 119 bits (298), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 136/281 (48%), Gaps = 6/281 (2%)
Query: 75 INRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGDD 134
+ V+++P G L +G LW+ S N LQ + +R +V+S N + +G
Sbjct: 1077 VRSVVFSPDGAMLASGGDDQIVRLWDISSGNCLYTLQGYTSWVRFLVFSPNGVTLANGSS 1136
Query: 135 GGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERSL 194
++ W + H V ++F S S D TV++WD + + L
Sbjct: 1137 DQIVRLWDISSKKCLYTLQGHTNWVNAVAFSPDGATLASGSGDQTVRLWDISSSKCLYIL 1196
Query: 195 TGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQNGNW 254
GH V SV ++P S L SG D V+LW+ S + LC+F GH + V V +N +G+
Sbjct: 1197 QGHTSWVNSVVFNPDGSTLASGSSDQTVRLWEINSSKCLCTFQGHTSWVNSVVFNPDGSM 1256
Query: 255 VLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFHWLVGH 314
+ + S D+ ++L+DI + K L +F+GH V ++A++P SGS D ++ W +
Sbjct: 1257 LASGSSDKTVRLWDISSSKCLHTFQGHTNWVNSVAFNP-DGSMLASGSGDQTVRLWEISS 1315
Query: 315 ETPQVEIHNVHDNTVW--DLAWHPIGYLLCSGSNDHTTKFW 353
+H +T W + + P G +L SGS+D T + W
Sbjct: 1316 SKC---LHTFQGHTSWVSSVTFSPDGTMLASGSDDQTVRLW 1353
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 136/279 (48%), Gaps = 2/279 (0%)
Query: 75 INRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGDD 134
+ V+++P L +GS LW+ S I Q H + S+ ++ + + + +G
Sbjct: 951 VRSVVFSPNSLMLASGSSDQTVRLWDISSGECLYIFQGHTGWVYSVAFNLDGSMLATGSG 1010
Query: 135 GGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERSL 194
++ W + + H VR + F S SDD TV++WD + +L
Sbjct: 1011 DQTVRLWDISSSQCFYIFQGHTSCVRSVVFSSDGAMLASGSDDQTVRLWDISSGNCLYTL 1070
Query: 195 TGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQNGNW 254
GH V+SV + P ++L SGG D +V+LWD SG L + G+ + V + ++ NG
Sbjct: 1071 QGHTSCVRSVVFSPDGAMLASGGDDQIVRLWDISSGNCLYTLQGYTSWVRFLVFSPNGVT 1130
Query: 255 VLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFHWLVGH 314
+ S DQI++L+DI + K L + +GH V A+A+ P SGS D ++ W +
Sbjct: 1131 LANGSSDQIVRLWDISSKKCLYTLQGHTNWVNAVAFSP-DGATLASGSGDQTVRLWDIS- 1188
Query: 315 ETPQVEIHNVHDNTVWDLAWHPIGYLLCSGSNDHTTKFW 353
+ + I H + V + ++P G L SGS+D T + W
Sbjct: 1189 SSKCLYILQGHTSWVNSVVFNPDGSTLASGSSDQTVRLW 1227
Score = 117 bits (293), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 136/279 (48%), Gaps = 2/279 (0%)
Query: 75 INRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGDD 134
+ V+++ G L +GS LW+ S N LQ H +RS+V+S + + SG D
Sbjct: 1035 VRSVVFSSDGAMLASGSDDQTVRLWDISSGNCLYTLQGHTSCVRSVVFSPDGAMLASGGD 1094
Query: 135 GGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERSL 194
++ W + N + VR L F + + S D V++WD + + +L
Sbjct: 1095 DQIVRLWDISSGNCLYTLQGYTSWVRFLVFSPNGVTLANGSSDQIVRLWDISSKKCLYTL 1154
Query: 195 TGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQNGNW 254
GH V +V + P + L SG D V+LWD S + L GH + V V +N +G+
Sbjct: 1155 QGHTNWVNAVAFSPDGATLASGSGDQTVRLWDISSSKCLYILQGHTSWVNSVVFNPDGST 1214
Query: 255 VLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFHWLVGH 314
+ + S DQ ++L++I + K L +F+GH V ++ ++P SGS D ++ W +
Sbjct: 1215 LASGSSDQTVRLWEINSSKCLCTFQGHTSWVNSVVFNP-DGSMLASGSSDKTVRLWDIS- 1272
Query: 315 ETPQVEIHNVHDNTVWDLAWHPIGYLLCSGSNDHTTKFW 353
+ + H N V +A++P G +L SGS D T + W
Sbjct: 1273 SSKCLHTFQGHTNWVNSVAFNPDGSMLASGSGDQTVRLW 1311
Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 134/279 (48%), Gaps = 2/279 (0%)
Query: 75 INRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGDD 134
+N V ++P G L +GS LW+ S ILQ H + S+V++ + + + SG
Sbjct: 1161 VNAVAFSPDGATLASGSGDQTVRLWDISSSKCLYILQGHTSWVNSVVFNPDGSTLASGSS 1220
Query: 135 GGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERSL 194
++ W+ N + H V + F S S D TV++WD + + +
Sbjct: 1221 DQTVRLWEINSSKCLCTFQGHTSWVNSVVFNPDGSMLASGSSDKTVRLWDISSSKCLHTF 1280
Query: 195 TGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQNGNW 254
GH V SV ++P S+L SG D V+LW+ S + L +F GH + V V ++ +G
Sbjct: 1281 QGHTNWVNSVAFNPDGSMLASGSGDQTVRLWEISSSKCLHTFQGHTSWVSSVTFSPDGTM 1340
Query: 255 VLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFHWLVGH 314
+ + S DQ ++L+ I + + L +F GH V ++ + P SGS D ++ W +
Sbjct: 1341 LASGSDDQTVRLWSISSGECLYTFLGHTNWVGSVIFSP-DGAILASGSGDQTVRLWSISS 1399
Query: 315 ETPQVEIHNVHDNTVWDLAWHPIGYLLCSGSNDHTTKFW 353
+ H+N V + + P G LL SGS+D T + W
Sbjct: 1400 GKCLYTLQG-HNNWVGSIVFSPDGTLLASGSDDQTVRLW 1437
Score = 108 bits (271), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 130/279 (46%), Gaps = 2/279 (0%)
Query: 75 INRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGDD 134
+N V++ P G L +GS LW S Q H + S+V++ + + + SG
Sbjct: 1203 VNSVVFNPDGSTLASGSSDQTVRLWEINSSKCLCTFQGHTSWVNSVVFNPDGSMLASGSS 1262
Query: 135 GGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERSL 194
++ W + + H V ++F S S D TV++W+ + + +
Sbjct: 1263 DKTVRLWDISSSKCLHTFQGHTNWVNSVAFNPDGSMLASGSGDQTVRLWEISSSKCLHTF 1322
Query: 195 TGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQNGNW 254
GH V SV + P ++L SG D V+LW SG L +F GH N V V ++ +G
Sbjct: 1323 QGHTSWVSSVTFSPDGTMLASGSDDQTVRLWSISSGECLYTFLGHTNWVGSVIFSPDGAI 1382
Query: 255 VLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFHWLVGH 314
+ + S DQ ++L+ I + K L + +GH V ++ + P SGS D ++ W +
Sbjct: 1383 LASGSGDQTVRLWSISSGKCLYTLQGHNNWVGSIVFSP-DGTLLASGSDDQTVRLWNISS 1441
Query: 315 ETPQVEIHNVHDNTVWDLAWHPIGYLLCSGSNDHTTKFW 353
+H H N+V +A+ G +L SGS+D T K W
Sbjct: 1442 GECLYTLHG-HINSVRSVAFSSDGLILASGSDDETIKLW 1479
Score = 108 bits (271), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 112/238 (47%), Gaps = 2/238 (0%)
Query: 116 AIRSMVWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCS 175
++ ++ +S + +GD GG +++W+ H V + F + S S
Sbjct: 866 SVLTVAFSPDGKLFATGDSGGIVRFWEAATGKELLTCKGHNSWVNSVGFSQDGKMLASGS 925
Query: 176 DDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCS 235
DD TV++WD + Q ++ GH V+SV + P +L SG D V+LWD SG L
Sbjct: 926 DDQTVRLWDISSGQCLKTFKGHTSRVRSVVFSPNSLMLASGSSDQTVRLWDISSGECLYI 985
Query: 236 FHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHE 295
F GH V V +N +G+ + T S DQ ++L+DI + + F+GH V ++ +
Sbjct: 986 FQGHTGWVYSVAFNLDGSMLATGSGDQTVRLWDISSSQCFYIFQGHTSCVRSVVFSS-DG 1044
Query: 296 EYFVSGSLDGSIFHWLVGHETPQVEIHNVHDNTVWDLAWHPIGYLLCSGSNDHTTKFW 353
SGS D ++ W + + H + V + + P G +L SG +D + W
Sbjct: 1045 AMLASGSDDQTVRLWDISSGNCLYTLQG-HTSCVRSVVFSPDGAMLASGGDDQIVRLW 1101
Score = 103 bits (256), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 129/296 (43%), Gaps = 8/296 (2%)
Query: 61 AKFVHTSLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSM 120
A ++ K S+ V ++P G+ TG G W + + + H+ + S+
Sbjct: 853 ANLAYSVFTKILGSVLTVAFSPDGKLFATGDSGGIVRFWEAATGKELLTCKGHNSWVNSV 912
Query: 121 VWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTV 180
+S + + SG D ++ W + H VR + F L S S D TV
Sbjct: 913 GFSQDGKMLASGSDDQTVRLWDISSGQCLKTFKGHTSRVRSVVFSPNSLMLASGSSDQTV 972
Query: 181 KVWDFARCQEERSLTGH-GWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGH 239
++WD + + GH GW V SV ++ S+L +G D V+LWD S + F GH
Sbjct: 973 RLWDISSGECLYIFQGHTGW-VYSVAFNLDGSMLATGSGDQTVRLWDISSSQCFYIFQGH 1031
Query: 240 KNMVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFV 299
+ V V ++ +G + + S DQ ++L+DI + L + +GH V ++ + P
Sbjct: 1032 TSCVRSVVFSSDGAMLASGSDDQTVRLWDISSGNCLYTLQGHTSCVRSVVFSP-DGAMLA 1090
Query: 300 SGSLDGSIFHWLVGHETPQVEIHNVHDNTVWD--LAWHPIGYLLCSGSNDHTTKFW 353
SG D + W + ++ + T W L + P G L +GS+D + W
Sbjct: 1091 SGGDDQIVRLWDISSGNC---LYTLQGYTSWVRFLVFSPNGVTLANGSSDQIVRLW 1143
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%)
Query: 75 INRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGDD 134
+N V + P G L +GS LW S Q H + S+ +S + + SG D
Sbjct: 1287 VNSVAFNPDGSMLASGSGDQTVRLWEISSSKCLHTFQGHTSWVSSVTFSPDGTMLASGSD 1346
Query: 135 GGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERSL 194
++ W + H V + F S S D TV++W + + +L
Sbjct: 1347 DQTVRLWSISSGECLYTFLGHTNWVGSVIFSPDGAILASGSGDQTVRLWSISSGKCLYTL 1406
Query: 195 TGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQNGNW 254
GH V S+ + P +LL SG D V+LW+ SG L + HGH N V V ++ +G
Sbjct: 1407 QGHNNWVGSIVFSPDGTLLASGSDDQTVRLWNISSGECLYTLHGHINSVRSVAFSSDGLI 1466
Query: 255 VLTASKDQIIKLYDIRAMKELESFRGHR 282
+ + S D+ IKL+D++ + +++ + +
Sbjct: 1467 LASGSDDETIKLWDVKTGECIKTLKSEK 1494
>sp|C3XVT5|LIS1_BRAFL Lissencephaly-1 homolog OS=Branchiostoma floridae
GN=BRAFLDRAFT_59218 PE=3 SV=1
Length = 406
Score = 117 bits (292), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 119/243 (48%), Gaps = 20/243 (8%)
Query: 129 MVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARC 188
MVS + IK W + + H ++V+D+SF + SCS D T+K+WDF
Sbjct: 121 MVSASEDATIKIWDYETGDFERTLKGHTDAVQDVSFDQQGKLLASCSADMTIKLWDFQTF 180
Query: 189 QEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKW 248
+ +++ GH +V SV + P L+S +D +K+W+ +G + +F GH+ V V+
Sbjct: 181 ENIKTMHGHDHNVSSVHFMPNGDFLISASRDKTIKMWELATGYCVKTFTGHREWVRTVRV 240
Query: 249 NQNGNWVLTASKDQIIKLYDIRAMKELES-FRGHRKDVTALAWHPFHEE----------- 296
NQ+G+ + + S DQ ++++ + A KE ++ R H V +AW P
Sbjct: 241 NQDGSLLASCSNDQTVRVW-VVANKECKAELREHEHVVECIAWAPESCNGHVSEVMGAEK 299
Query: 297 ------YFVSGSLDGSIFHWLVGHETPQVEIHNVHDNTVWDLAWHPIGYLLCSGSNDHTT 350
+ +SGS D +I W + + + HDN V + WHP G + S S+D T
Sbjct: 300 KGRSGPFLLSGSRDKTIKMWDISTGVCIMTLVG-HDNWVRGVVWHPGGKYIISASDDKTI 358
Query: 351 KFW 353
+ W
Sbjct: 359 RVW 361
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 118/257 (45%), Gaps = 23/257 (8%)
Query: 74 SINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGD 133
++ V + G+ L + S LW+ Q+F + HDH + S+ + N ++++S
Sbjct: 150 AVQDVSFDQQGKLLASCSADMTIKLWDFQTFENIKTMHGHDHNVSSVHFMPNGDFLISAS 209
Query: 134 DGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERS 193
IK W+ + H+E VR + + SCS+D TV+VW A + +
Sbjct: 210 RDKTIKMWELATGYCVKTFTGHREWVRTVRVNQDGSLLASCSNDQTVRVWVVANKECKAE 269
Query: 194 LTGHGWDVKSVDWHPTKS------------------LLVSGGKDSLVKLWDAKSGRELCS 235
L H V+ + W P L+SG +D +K+WD +G + +
Sbjct: 270 LREHEHVVECIAWAPESCNGHVSEVMGAEKKGRSGPFLLSGSRDKTIKMWDISTGVCIMT 329
Query: 236 FHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHE 295
GH N V V W+ G ++++AS D+ I+++D + + ++ H+ T++ FH
Sbjct: 330 LVGHDNWVRGVVWHPGGKYIISASDDKTIRVWDYKNKRCQKTLEAHQHFCTSI---DFHR 386
Query: 296 E--YFVSGSLDGSIFHW 310
Y ++GS+D ++ W
Sbjct: 387 SAPYVITGSVDQTVKVW 403
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 86/161 (53%), Gaps = 2/161 (1%)
Query: 193 SLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQNG 252
SL+GH + V +HP S++VS +D+ +K+WD ++G + GH + V V ++Q G
Sbjct: 101 SLSGHRSPITRVLFHPVYSVMVSASEDATIKIWDYETGDFERTLKGHTDAVQDVSFDQQG 160
Query: 253 NWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFHWLV 312
+ + S D IKL+D + + +++ GH +V+++ + P + ++ +S S D +I W +
Sbjct: 161 KLLASCSADMTIKLWDFQTFENIKTMHGHDHNVSSVHFMP-NGDFLISASRDKTIKMWEL 219
Query: 313 GHETPQVEIHNVHDNTVWDLAWHPIGYLLCSGSNDHTTKFW 353
V+ H V + + G LL S SND T + W
Sbjct: 220 A-TGYCVKTFTGHREWVRTVRVNQDGSLLASCSNDQTVRVW 259
>sp|Q00808|HETE1_PODAS Vegetative incompatibility protein HET-E-1 OS=Podospora anserina
GN=HET-E1 PE=4 SV=1
Length = 1356
Score = 116 bits (291), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 132/279 (47%), Gaps = 2/279 (0%)
Query: 75 INRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGDD 134
+ V ++P G+R+ +GS +W+ S L+ H ++ S+ +S + + SG
Sbjct: 928 VQSVAFSPDGQRVASGSDDHTIKIWDAASGTCTQTLEGHGSSVLSVAFSPDGQRVASGSG 987
Query: 135 GGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERSL 194
IK W H SV ++F + S SDD T+K+WD A ++L
Sbjct: 988 DKTIKIWDTASGTCTQTLEGHGGSVWSVAFSPDGQRVASGSDDKTIKIWDTASGTCTQTL 1047
Query: 195 TGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQNGNW 254
GHG V+SV + P + SG D +K+WDA SG + GH + V V ++ +G
Sbjct: 1048 EGHGGWVQSVVFSPDGQRVASGSDDHTIKIWDAVSGTCTQTLEGHGDSVWSVAFSPDGQR 1107
Query: 255 VLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFHWLVGH 314
V + S D IK++D + ++ GH V ++A+ P + SGS+DG+I W
Sbjct: 1108 VASGSIDGTIKIWDAASGTCTQTLEGHGGWVHSVAFSP-DGQRVASGSIDGTIKIWDAAS 1166
Query: 315 ETPQVEIHNVHDNTVWDLAWHPIGYLLCSGSNDHTTKFW 353
T + H V +A+ P G + SGS+D T K W
Sbjct: 1167 GTCTQTLEG-HGGWVQSVAFSPDGQRVASGSSDKTIKIW 1204
Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 133/282 (47%), Gaps = 6/282 (2%)
Query: 74 SINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGD 133
S+ V ++ G+R+ +GS +W+ S L+ H ++ S+ +S + + SG
Sbjct: 843 SVLSVAFSADGQRVASGSDDKTIKIWDTASGTGTQTLEGHGGSVWSVAFSPDRERVASGS 902
Query: 134 DGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERS 193
D IK W H V+ ++F + S SDD T+K+WD A ++
Sbjct: 903 DDKTIKIWDAASGTCTQTLEGHGGRVQSVAFSPDGQRVASGSDDHTIKIWDAASGTCTQT 962
Query: 194 LTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQNGN 253
L GHG V SV + P + SG D +K+WD SG + GH V V ++ +G
Sbjct: 963 LEGHGSSVLSVAFSPDGQRVASGSGDKTIKIWDTASGTCTQTLEGHGGSVWSVAFSPDGQ 1022
Query: 254 WVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFHW--L 311
V + S D+ IK++D + ++ GH V ++ + P + SGS D +I W +
Sbjct: 1023 RVASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSP-DGQRVASGSDDHTIKIWDAV 1081
Query: 312 VGHETPQVEIHNVHDNTVWDLAWHPIGYLLCSGSNDHTTKFW 353
G T +E H ++VW +A+ P G + SGS D T K W
Sbjct: 1082 SGTCTQTLEGHG---DSVWSVAFSPDGQRVASGSIDGTIKIW 1120
Score = 112 bits (281), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 127/280 (45%), Gaps = 2/280 (0%)
Query: 74 SINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGD 133
S+ V ++P R+ +GS +W+ S L+ H ++S+ +S + + SG
Sbjct: 885 SVWSVAFSPDRERVASGSDDKTIKIWDAASGTCTQTLEGHGGRVQSVAFSPDGQRVASGS 944
Query: 134 DGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERS 193
D IK W H SV ++F + S S D T+K+WD A ++
Sbjct: 945 DDHTIKIWDAASGTCTQTLEGHGSSVLSVAFSPDGQRVASGSGDKTIKIWDTASGTCTQT 1004
Query: 194 LTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQNGN 253
L GHG V SV + P + SG D +K+WD SG + GH V V ++ +G
Sbjct: 1005 LEGHGGSVWSVAFSPDGQRVASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPDGQ 1064
Query: 254 WVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFHWLVG 313
V + S D IK++D + ++ GH V ++A+ P + SGS+DG+I W
Sbjct: 1065 RVASGSDDHTIKIWDAVSGTCTQTLEGHGDSVWSVAFSP-DGQRVASGSIDGTIKIWDAA 1123
Query: 314 HETPQVEIHNVHDNTVWDLAWHPIGYLLCSGSNDHTTKFW 353
T + H V +A+ P G + SGS D T K W
Sbjct: 1124 SGTCTQTLEG-HGGWVHSVAFSPDGQRVASGSIDGTIKIW 1162
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 134/298 (44%), Gaps = 4/298 (1%)
Query: 74 SINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGD 133
S+ V ++P G+R+ +GS +W+ S L+ H ++ S+ +S + + SG
Sbjct: 969 SVLSVAFSPDGQRVASGSGDKTIKIWDTASGTCTQTLEGHGGSVWSVAFSPDGQRVASGS 1028
Query: 134 DGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERS 193
D IK W H V+ + F + S SDD T+K+WD ++
Sbjct: 1029 DDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPDGQRVASGSDDHTIKIWDAVSGTCTQT 1088
Query: 194 LTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQNGN 253
L GHG V SV + P + SG D +K+WDA SG + GH V V ++ +G
Sbjct: 1089 LEGHGDSVWSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQ 1148
Query: 254 WVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFHWLVG 313
V + S D IK++D + ++ GH V ++A+ P + SGS D +I W
Sbjct: 1149 RVASGSIDGTIKIWDAASGTCTQTLEGHGGWVQSVAFSP-DGQRVASGSSDKTIKIWDTA 1207
Query: 314 HETPQVEIHNVHDNTVWDLAWHPIGYLLCSGSNDHTTKFWCRNRPGDTARDKFNMGQN 371
T + H V +A+ P G + SGS+D+T K W + T N+G
Sbjct: 1208 SGTCTQTLEG-HGGWVQSVAFSPDGQRVASGSSDNTIKIW--DTASGTCTQTLNVGST 1262
Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 77/162 (47%), Gaps = 2/162 (1%)
Query: 192 RSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQN 251
++L GHG V SV + + SG D +K+WD SG + GH V V ++ +
Sbjct: 835 QTLEGHGSSVLSVAFSADGQRVASGSDDKTIKIWDTASGTGTQTLEGHGGSVWSVAFSPD 894
Query: 252 GNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFHWL 311
V + S D+ IK++D + ++ GH V ++A+ P + SGS D +I W
Sbjct: 895 RERVASGSDDKTIKIWDAASGTCTQTLEGHGGRVQSVAFSP-DGQRVASGSDDHTIKIWD 953
Query: 312 VGHETPQVEIHNVHDNTVWDLAWHPIGYLLCSGSNDHTTKFW 353
T + H ++V +A+ P G + SGS D T K W
Sbjct: 954 AASGTCTQTLEG-HGSSVLSVAFSPDGQRVASGSGDKTIKIW 994
>sp|O61585|KTNB1_STRPU Katanin p80 WD40 repeat-containing subunit B1 OS=Strongylocentrotus
purpuratus GN=KATNB1 PE=1 SV=1
Length = 690
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 113/225 (50%), Gaps = 15/225 (6%)
Query: 129 MVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARC 188
MV+G + + W N + S H V + F ++ + S T+K++D
Sbjct: 32 MVTGGEDKKVNLWAVGKQNCIISLSGHTSPVDSVKFNSSEELVVAGSQSGTMKIYDLEPA 91
Query: 189 QEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKW 248
+ R+LTGH ++ +D+HP + SG D+ VKLWD + + ++ GH + V +K+
Sbjct: 92 KIVRTLTGHRNSIRCMDFHPFGEFVASGSTDTNVKLWDVRRKGCIYTYKGHSDQVNMIKF 151
Query: 249 NQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIF 308
+ +G W++TAS+D IKL+D+ K + F+ H VT + +HP +E SGS D ++
Sbjct: 152 SPDGKWLVTASEDTTIKLWDLTMGKLFQEFKNHTGGVTGIEFHP-NEFLLASGSSDRTVQ 210
Query: 309 HW------LVGHETPQVEIHNVHDNTVWDLAWHPIG-YLLCSGSN 346
W LV +P + V +++HP G YL CS +
Sbjct: 211 FWDLETFQLVSSTSPGA-------SAVRSISFHPDGSYLFCSSQD 248
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 101/228 (44%)
Query: 83 TGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGDDGGAIKYWQ 142
+GR ++TG + + LW N + L H + S+ ++ ++ +V+G G +K +
Sbjct: 28 SGRVMVTGGEDKKVNLWAVGKQNCIISLSGHTSPVDSVKFNSSEELVVAGSQSGTMKIYD 87
Query: 143 NNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERSLTGHGWDVK 202
+ + H+ S+R + F S S DT VK+WD R + GH V
Sbjct: 88 LEPAKIVRTLTGHRNSIRCMDFHPFGEFVASGSTDTNVKLWDVRRKGCIYTYKGHSDQVN 147
Query: 203 SVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQNGNWVLTASKDQ 262
+ + P LV+ +D+ +KLWD G+ F H V ++++ N + + S D+
Sbjct: 148 MIKFSPDGKWLVTASEDTTIKLWDLTMGKLFQEFKNHTGGVTGIEFHPNEFLLASGSSDR 207
Query: 263 IIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFHW 310
++ +D+ + + S V ++++HP F S F W
Sbjct: 208 TVQFWDLETFQLVSSTSPGASAVRSISFHPDGSYLFCSSQDMLHAFGW 255
Score = 77.4 bits (189), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 90/197 (45%)
Query: 67 SLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHND 126
SL+ + ++ V + + ++ GSQSG +++ + L H ++IR M +
Sbjct: 54 SLSGHTSPVDSVKFNSSEELVVAGSQSGTMKIYDLEPAKIVRTLTGHRNSIRCMDFHPFG 113
Query: 127 NWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFA 186
++ SG +K W H + V + F + S+DTT+K+WD
Sbjct: 114 EFVASGSTDTNVKLWDVRRKGCIYTYKGHSDQVNMIKFSPDGKWLVTASEDTTIKLWDLT 173
Query: 187 RCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCV 246
+ + H V +++HP + LL SG D V+ WD ++ + + S + V +
Sbjct: 174 MGKLFQEFKNHTGGVTGIEFHPNEFLLASGSSDRTVQFWDLETFQLVSSTSPGASAVRSI 233
Query: 247 KWNQNGNWVLTASKDQI 263
++ +G+++ +S+D +
Sbjct: 234 SFHPDGSYLFCSSQDML 250
>sp|C4Q0P6|LIS1_SCHMA Lissencephaly-1 homolog OS=Schistosoma mansoni GN=Smp_129340 PE=3
SV=1
Length = 417
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/244 (31%), Positives = 117/244 (47%), Gaps = 14/244 (5%)
Query: 127 NWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFA 186
N VS + +IK W + H +SV+D++F + SCS D VK+WDF
Sbjct: 135 NVFVSASEDASIKVWDYETGEFEHTLKGHTDSVQDVAFDPSGKFLASCSADMQVKLWDFT 194
Query: 187 RCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCV 246
Q ++LTGH +V SV + P+ LVS +D +K+W+ +G +F GH + V
Sbjct: 195 IYQCIKTLTGHDHNVSSVAFLPSGDFLVSASRDKTIKMWEVSTGYCTKTFIGHTEWIRSV 254
Query: 247 KWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAW--HPFH---------- 294
+ + GN + + S D I+++ + + + RGH V +AW HP +
Sbjct: 255 RPSPEGNLLASCSNDHTIRIWSVESRECQVVLRGHEHVVECIAWASHPQNLNSLPSSMNS 314
Query: 295 EEYFVSGSLDGSIFHWLVGHETPQVEIHNVHDNTVWDLAWHPIGYLLCSGSNDHTTKFW- 353
VSGS D +I W V + HDN V L +HP G LL S S+D T + W
Sbjct: 315 SLLLVSGSRDRTIRFWDVNIGICLFVLIG-HDNWVRQLVFHPHGRLLLSASDDKTIRVWD 373
Query: 354 CRNR 357
+NR
Sbjct: 374 LKNR 377
Score = 93.6 bits (231), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 136/309 (44%), Gaps = 19/309 (6%)
Query: 61 AKFVHTSLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSM 120
AKF +L +R I RVL+ P ++ S+ +W+ ++ FE L+ H +++ +
Sbjct: 114 AKF---TLTGHRSPITRVLFHPHYNVFVSASEDASIKVWDYETGEFEHTLKGHTDSVQDV 170
Query: 121 VWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTV 180
+ + ++ S +K W + + H +V ++F + S S D T+
Sbjct: 171 AFDPSGKFLASCSADMQVKLWDFTIYQCIKTLTGHDHNVSSVAFLPSGDFLVSASRDKTI 230
Query: 181 KVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHK 240
K+W+ + ++ GH ++SV P +LL S D +++W +S GH+
Sbjct: 231 KMWEVSTGYCTKTFIGHTEWIRSVRPSPEGNLLASCSNDHTIRIWSVESRECQVVLRGHE 290
Query: 241 NMVLCVKWN---QNGN----------WVLTASKDQIIKLYDIRAMKELESFRGHRKDVTA 287
++V C+ W QN N +++ S+D+ I+ +D+ L GH V
Sbjct: 291 HVVECIAWASHPQNLNSLPSSMNSSLLLVSGSRDRTIRFWDVNIGICLFVLIGHDNWVRQ 350
Query: 288 LAWHPFHEEYFVSGSLDGSIFHWLVGHETPQVEIHNVHDNTVWDLAWHPIGYLLCSGSND 347
L +HP H +S S D +I W + + + N H + V L + + +GS D
Sbjct: 351 LVFHP-HGRLLLSASDDKTIRVWDLKNRRCHKTL-NAHSHFVTSLDVNRLAPYAITGSVD 408
Query: 348 HTTKFW-CR 355
T W CR
Sbjct: 409 QTIHIWDCR 417
>sp|Q42384|PRL1_ARATH Protein pleiotropic regulatory locus 1 OS=Arabidopsis thaliana
GN=PRL1 PE=1 SV=1
Length = 486
Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 96/198 (48%), Gaps = 1/198 (0%)
Query: 109 ILQAHDHAIRSMVWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTD 168
++Q H +RS+ + ++ W +G IK W +K + H E VR L+
Sbjct: 171 VIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRH 230
Query: 169 LKFCSCSDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAK 228
S DD VK WD + + RS GH V + HPT +L++GG+DS+ ++WD +
Sbjct: 231 TYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIR 290
Query: 229 SGRELCSFHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTAL 288
+ ++ + GH N V V V+T S D IK +D+R K + + H+K V A+
Sbjct: 291 TKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAM 350
Query: 289 AWHPFHEEYFVSGSLDGS 306
HP E F S S D +
Sbjct: 351 TLHP-KENAFASASADNT 367
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 99/195 (50%), Gaps = 4/195 (2%)
Query: 159 VRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGK 218
VR ++F ++ FC+ S D T+K+WD A + +LTGH V+ + + + S G
Sbjct: 179 VRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTYMFSAGD 238
Query: 219 DSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESF 278
D VK WD + + + S+HGH + V C+ + + +LT +D + +++DIR ++ +
Sbjct: 239 DKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTKMQIFAL 298
Query: 279 RGHRKDVTALAWHPFHEEYFVSGSLDGSIFHWLVGH-ETPQVEIHNVHDNTVWDLAWHPI 337
GH V ++ P + V+GS D +I W + + +T H H +V + HP
Sbjct: 299 SGHDNTVCSVFTRPTDPQ-VVTGSHDTTIKFWDLRYGKTMSTLTH--HKKSVRAMTLHPK 355
Query: 338 GYLLCSGSNDHTTKF 352
S S D+T KF
Sbjct: 356 ENAFASASADNTKKF 370
Score = 83.2 bits (204), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 112/286 (39%), Gaps = 9/286 (3%)
Query: 75 INRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGDD 134
+ V + P+ TGS +W+ + ++ L H +R + S+ +M S D
Sbjct: 179 VRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTYMFSAGD 238
Query: 135 GGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERSL 194
+K W N V + H V L+ T + D+ +VWD + +L
Sbjct: 239 DKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTKMQIFAL 298
Query: 195 TGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQNGNW 254
+GH V SV PT +V+G D+ +K WD + G+ + + HK V + + N
Sbjct: 299 SGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHPKENA 358
Query: 255 VLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFH--WLV 312
+AS D K + + + A+A + + V+G +GSI+ W
Sbjct: 359 FASASADNTKKFSLPKGEFCHNMLSQQKTIINAMAVN--EDGVMVTGGDNGSIWFWDWKS 416
Query: 313 GHETPQVEI-----HNVHDNTVWDLAWHPIGYLLCSGSNDHTTKFW 353
GH Q E + ++ + G L + D T K W
Sbjct: 417 GHSFQQSETIVQPGSLESEAGIYAACYDNTGSRLVTCEADKTIKMW 462
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 79/163 (48%), Gaps = 4/163 (2%)
Query: 192 RSLTGH-GWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQ 250
R + GH GW V+SV + P+ +G D +K+WD +G + GH V + +
Sbjct: 170 RVIQGHLGW-VRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSN 228
Query: 251 NGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFHW 310
++ +A D+ +K +D+ K + S+ GH V LA HP + ++G D W
Sbjct: 229 RHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLD-VLLTGGRDSVCRVW 287
Query: 311 LVGHETPQVEIHNVHDNTVWDLAWHPIGYLLCSGSNDHTTKFW 353
+ + Q+ + HDNTV + P + +GS+D T KFW
Sbjct: 288 DIRTKM-QIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFW 329
>sp|Q8JZX3|POC1A_MOUSE POC1 centriolar protein homolog A OS=Mus musculus GN=Poc1a PE=2
SV=2
Length = 405
Score = 113 bits (283), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 115/237 (48%), Gaps = 1/237 (0%)
Query: 74 SINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGD 133
++ V ++P+G L +GS+ +W + +AH +RS+ + + +V+
Sbjct: 63 AVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTAS 122
Query: 134 DGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERS 193
D +K W + + + H VR F S SDD TVK+WD + S
Sbjct: 123 DDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHS 182
Query: 194 LTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQNGN 253
HG V VD+HP+ + + + G D+ VK+WDA++ R L + H V + ++ +GN
Sbjct: 183 YCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGN 242
Query: 254 WVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFHW 310
+++TAS D +K+ D+ + L + GH+ T +A+ EYF SG D + W
Sbjct: 243 YLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRT-GEYFASGGSDEQVMVW 298
Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 158/381 (41%), Gaps = 54/381 (14%)
Query: 71 NRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMV 130
+R ++ V ++ + L +GS +W+ + + H A+ + +S + + +
Sbjct: 18 HRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLA 77
Query: 131 SGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQE 190
SG ++ W N+ AH +VR + FC + SDD TVKVW R +
Sbjct: 78 SGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQRF 137
Query: 191 ERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQ 250
SLT H V+ + P L+VS D VKLWD S + S+ H V V ++
Sbjct: 138 LFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHP 197
Query: 251 NGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGS-------- 302
+G + A D +K++D R + L+ ++ H V AL++HP Y ++ S
Sbjct: 198 SGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHP-SGNYLITASSDSTLKIL 256
Query: 303 --LDGSIFHWLVGHETPQVEIHNVHDNTVWDLAWHPIGYLLCSGSNDHTTKFWCRNRPGD 360
++G + + L GH+ P + A+ G SG +D W N
Sbjct: 257 DLMEGRLLYTLHGHQGPATTV-----------AFSRTGEYFASGGSDEQVMVWKSN---- 301
Query: 361 TARDKFNMGQNQGYGEQNAVFAGRMPGNFPLPEGPTTPGPFAPGLTRNEGTIPGVGVAMP 420
F++ YG+ A R P P LT + GT+P + + +P
Sbjct: 302 -----FDIVD---YGDMKA----RRP----------------PPLTSSSGTLPKMDLPVP 333
Query: 421 LSIPSFDSSAQGEQKQPLSMP 441
S QGE ++ +SMP
Sbjct: 334 PGRDRSLESVQGEPQESISMP 354
Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 92/218 (42%), Gaps = 4/218 (1%)
Query: 66 TSLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHN 125
T + ++ V + G+ L+T S +W+ F L H + +R +S +
Sbjct: 97 TVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPD 156
Query: 126 DNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDF 185
+VS D +K W + H V + F + + D TVKVWD
Sbjct: 157 GRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDA 216
Query: 186 ARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLC 245
+ + H V ++ +HP+ + L++ DS +K+ D GR L + HGH+
Sbjct: 217 RTHRLLQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATT 276
Query: 246 VKWNQNGNWVLTASKDQIIKL----YDIRAMKELESFR 279
V +++ G + + D+ + + +DI ++++ R
Sbjct: 277 VAFSRTGEYFASGGSDEQVMVWKSNFDIVDYGDMKARR 314
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 73/163 (44%), Gaps = 2/163 (1%)
Query: 191 ERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQ 250
ER GH V VD+ L SG DS + +W K F GHK+ V CV ++
Sbjct: 12 ERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSP 71
Query: 251 NGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFHW 310
+G+ + + S+D+ ++++ E FR H V ++ + + V+ S D ++ W
Sbjct: 72 SGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCS-DGQSLVTASDDKTVKVW 130
Query: 311 LVGHETPQVEIHNVHDNTVWDLAWHPIGYLLCSGSNDHTTKFW 353
+ + H N V + P G L+ S S+D T K W
Sbjct: 131 STHRQRFLFSLTQ-HINWVRCAKFSPDGRLIVSASDDKTVKLW 172
>sp|B7PS00|LIS1_IXOSC Lissencephaly-1 homolog OS=Ixodes scapularis GN=IscW_ISCW007420
PE=3 SV=2
Length = 411
Score = 112 bits (280), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 118/247 (47%), Gaps = 23/247 (9%)
Query: 129 MVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARC 188
+VS + +IK W + + H +SV+D++F T SCS D T+K+WDF
Sbjct: 121 VVSASEDASIKVWDYETGDFERTIKGHTDSVQDIAFDHTGQFLASCSADMTIKLWDFKSY 180
Query: 189 QEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKW 248
+ R++ GH +V SV + P+ +VS +D +K+W+ +G + +F GH++ V V+
Sbjct: 181 ECLRTMHGHDHNVSSVCFLPSGDHVVSCSRDKSIKMWEVATGYCVRTFTGHRDWVRMVRV 240
Query: 249 NQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEE------------ 296
N +G+ + + S DQ ++++ + + R H V +AW P H +
Sbjct: 241 NSDGSLLASCSNDQTVRVWVVGTKECKLELREHDHVVECVAWAPAHAQLCGAAGDSNRRP 300
Query: 297 ----------YFVSGSLDGSIFHWLVGHETPQVEIHNVHDNTVWDLAWHPIGYLLCSGSN 346
+ VSGS D +I W V + HDN V + +HP G L S S+
Sbjct: 301 GAGGAQGTGPFLVSGSRDKTIKVWDVSTGLALFTLVG-HDNWVRGVKFHPGGKYLLSASD 359
Query: 347 DHTTKFW 353
D T + W
Sbjct: 360 DKTLRVW 366
Score = 100 bits (248), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 135/314 (42%), Gaps = 26/314 (8%)
Query: 66 TSLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHN 125
++L +R I RVL+ P +++ S+ +W+ ++ +FE ++ H +++ + + H
Sbjct: 100 SALLGHRAPITRVLFHPVYSVVVSASEDASIKVWDYETGDFERTIKGHTDSVQDIAFDHT 159
Query: 126 DNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDF 185
++ S IK W H +V + F + SCS D ++K+W+
Sbjct: 160 GQFLASCSADMTIKLWDFKSYECLRTMHGHDHNVSSVCFLPSGDHVVSCSRDKSIKMWEV 219
Query: 186 ARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLC 245
A R+ TGH V+ V + SLL S D V++W + H ++V C
Sbjct: 220 ATGYCVRTFTGHRDWVRMVRVNSDGSLLASCSNDQTVRVWVVGTKECKLELREHDHVVEC 279
Query: 246 VKW-----------------------NQNGNWVLTASKDQIIKLYDIRAMKELESFRGHR 282
V W G ++++ S+D+ IK++D+ L + GH
Sbjct: 280 VAWAPAHAQLCGAAGDSNRRPGAGGAQGTGPFLVSGSRDKTIKVWDVSTGLALFTLVGHD 339
Query: 283 KDVTALAWHPFHEEYFVSGSLDGSIFHWLVGHETPQVEIHNVHDNTVWDLAWHPIGYLLC 342
V + +HP +Y +S S D ++ W + H+ + + H + L +H +
Sbjct: 340 NWVRGVKFHP-GGKYLLSASDDKTLRVWELAHQRC-CKTLDAHSHFCTSLDFHRTAPYVV 397
Query: 343 SGSNDHTTKFW-CR 355
+GS D T K W CR
Sbjct: 398 TGSVDQTVKVWECR 411
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 85/164 (51%), Gaps = 2/164 (1%)
Query: 190 EERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWN 249
E +L GH + V +HP S++VS +D+ +K+WD ++G + GH + V + ++
Sbjct: 98 ERSALLGHRAPITRVLFHPVYSVVVSASEDASIKVWDYETGDFERTIKGHTDSVQDIAFD 157
Query: 250 QNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFH 309
G ++ + S D IKL+D ++ + L + GH +V+++ + P ++ VS S D SI
Sbjct: 158 HTGQFLASCSADMTIKLWDFKSYECLRTMHGHDHNVSSVCFLP-SGDHVVSCSRDKSIKM 216
Query: 310 WLVGHETPQVEIHNVHDNTVWDLAWHPIGYLLCSGSNDHTTKFW 353
W V V H + V + + G LL S SND T + W
Sbjct: 217 WEVA-TGYCVRTFTGHRDWVRMVRVNSDGSLLASCSNDQTVRVW 259
>sp|Q8NBT0|POC1A_HUMAN POC1 centriolar protein homolog A OS=Homo sapiens GN=POC1A PE=1
SV=2
Length = 407
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 114/237 (48%), Gaps = 1/237 (0%)
Query: 74 SINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGD 133
++ V ++P+G L +GS+ +W + +AH +RS+ + + V+
Sbjct: 63 AVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTAS 122
Query: 134 DGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERS 193
D +K W + + S H VR F S SDD TVK+WD + + S
Sbjct: 123 DDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHS 182
Query: 194 LTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQNGN 253
HG V VD+HP+ + + + G D+ VK+WD ++ R L + H V + ++ +GN
Sbjct: 183 YCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGN 242
Query: 254 WVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFHW 310
+++TAS D +K+ D+ + L + GH+ T +A+ EYF SG D + W
Sbjct: 243 YLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRT-GEYFASGGSDEQVMVW 298
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 143/339 (42%), Gaps = 29/339 (8%)
Query: 71 NRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMV 130
+R ++ V ++ ++L +GS +W+ + + H A+ + +S + + +
Sbjct: 18 HRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLA 77
Query: 131 SGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQE 190
SG ++ W N+ AH +VR + FC F + SDD TVKVW R +
Sbjct: 78 SGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKF 137
Query: 191 ERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQ 250
SL+ H V+ + P L+VS D VKLWD S + S+ H V V ++
Sbjct: 138 LFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHP 197
Query: 251 NGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGS-------- 302
+G + A D +K++D+R + L+ ++ H V L++HP Y ++ S
Sbjct: 198 SGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHP-SGNYLITASSDSTLKIL 256
Query: 303 --LDGSIFHWLVGHETPQVEIHNVHDNTVWDLAWHPIGYLLCSGSNDHTTKFWCRNRPGD 360
++G + + L GH+ P + A+ G SG +D W N
Sbjct: 257 DLMEGRLLYTLHGHQGPATTV-----------AFSRTGEYFASGGSDEQVMVWKSN---- 301
Query: 361 TARDKFNMGQNQGYGEQNAVFAGRMPGNFPLPEGPTTPG 399
D + G+ A A M GN P + P PG
Sbjct: 302 --FDIVDHGEVTKVPRPPATLASSM-GNLPEVDFPVPPG 337
Score = 83.6 bits (205), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 111/248 (44%), Gaps = 2/248 (0%)
Query: 105 NFEMILQAHDHAIRSMVWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSF 164
+ E + H A+ + +S N + SG + W + + HK++V ++F
Sbjct: 10 SLERHFKGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNF 69
Query: 165 CRTDLKFCSCSDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKL 224
+ S S D TV++W E H V+SV + V+ D VK+
Sbjct: 70 SPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKV 129
Query: 225 WDAKSGRELCSFHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKD 284
W + L S H N V C K++ +G +++AS D+ +KL+D + + + S+ H
Sbjct: 130 WATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGF 189
Query: 285 VTALAWHPFHEEYFVSGSLDGSIFHWLVGHETPQVEIHNVHDNTVWDLAWHPIGYLLCSG 344
VT + +HP +G +D ++ W V ++ + +H V L++HP G L +
Sbjct: 190 VTYVDFHPSGTCIAAAG-MDNTVKVWDV-RTHRLLQHYQLHSAAVNGLSFHPSGNYLITA 247
Query: 345 SNDHTTKF 352
S+D T K
Sbjct: 248 SSDSTLKI 255
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 83/202 (41%)
Query: 66 TSLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHN 125
T + ++ V + G+ +T S +W F L H + +R +S +
Sbjct: 97 TVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPD 156
Query: 126 DNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDF 185
+VS D +K W + + H V + F + + D TVKVWD
Sbjct: 157 GRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDV 216
Query: 186 ARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLC 245
+ + H V + +HP+ + L++ DS +K+ D GR L + HGH+
Sbjct: 217 RTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATT 276
Query: 246 VKWNQNGNWVLTASKDQIIKLY 267
V +++ G + + D+ + ++
Sbjct: 277 VAFSRTGEYFASGGSDEQVMVW 298
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 75/163 (46%), Gaps = 2/163 (1%)
Query: 191 ERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQ 250
ER GH V VD+ L SG DS + +W K F GHK+ V CV ++
Sbjct: 12 ERHFKGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSP 71
Query: 251 NGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFHW 310
+G+ + + S+D+ ++++ E FR H V ++ + + FV+ S D ++ W
Sbjct: 72 SGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCS-DGQSFVTASDDKTVKVW 130
Query: 311 LVGHETPQVEIHNVHDNTVWDLAWHPIGYLLCSGSNDHTTKFW 353
H + + H N V + P G L+ S S+D T K W
Sbjct: 131 -ATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLW 172
>sp|Q2TBP4|POC1A_BOVIN POC1 centriolar protein homolog A OS=Bos taurus GN=POC1A PE=2 SV=1
Length = 407
Score = 110 bits (276), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 113/237 (47%), Gaps = 1/237 (0%)
Query: 74 SINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGD 133
++ V ++P+G L +GS+ +W + +AH +RS+ + + V+
Sbjct: 63 AVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTAS 122
Query: 134 DGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERS 193
D +K W + + S H VR F S SDD TVK+WD + S
Sbjct: 123 DDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHS 182
Query: 194 LTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQNGN 253
HG V VD+HP+ + + + G D+ VK+WD ++ R L + H V + ++ +GN
Sbjct: 183 YCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGN 242
Query: 254 WVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFHW 310
+++TAS D +K+ D+ + L + GH+ T +A+ EYF SG D + W
Sbjct: 243 YLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRT-GEYFASGGSDEQVMVW 298
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 129/296 (43%), Gaps = 22/296 (7%)
Query: 71 NRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMV 130
+R ++ V ++ ++L +GS +W+ + H A+ + +S + + +
Sbjct: 18 HRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFSPSGHLLA 77
Query: 131 SGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQE 190
SG ++ W N+ AH +VR + FC F + SDD TVKVW R +
Sbjct: 78 SGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWSTHRQKF 137
Query: 191 ERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQ 250
SL+ H V+ + P L+VS D VKLWD S + S+ H V V ++
Sbjct: 138 LFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHP 197
Query: 251 NGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGS-------- 302
+G + A D +K++D+R + L+ ++ H V AL++HP Y V+ S
Sbjct: 198 SGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHP-SGNYLVTASSDSTLKIL 256
Query: 303 --LDGSIFHWLVGHETPQVEIHNVHDNTVWDLAWHPIGYLLCSGSNDHTTKFWCRN 356
++G + + L GH+ P + A+ G SG +D W N
Sbjct: 257 DLMEGRLLYTLHGHQGPATTV-----------AFSRTGEYFASGGSDEQVMVWKSN 301
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 111/248 (44%), Gaps = 2/248 (0%)
Query: 105 NFEMILQAHDHAIRSMVWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSF 164
+ E + H A+ S+ +S N + SG + W + HK++V ++F
Sbjct: 10 SLERHFKGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNF 69
Query: 165 CRTDLKFCSCSDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKL 224
+ S S D TV++W E H V+SV + V+ D VK+
Sbjct: 70 SPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKV 129
Query: 225 WDAKSGRELCSFHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKD 284
W + L S H N V C K++ +G +++AS D+ +KL+D + + + S+ H
Sbjct: 130 WSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGF 189
Query: 285 VTALAWHPFHEEYFVSGSLDGSIFHWLVGHETPQVEIHNVHDNTVWDLAWHPIGYLLCSG 344
VT + +HP +G +D ++ W V ++ + +H V L++HP G L +
Sbjct: 190 VTYVDFHPSGTCIAAAG-MDNTVKVWDV-RTHRLLQHYQLHSAAVNALSFHPSGNYLVTA 247
Query: 345 SNDHTTKF 352
S+D T K
Sbjct: 248 SSDSTLKI 255
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 84/202 (41%)
Query: 66 TSLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHN 125
T + ++ V + G+ +T S +W+ F L H + +R +S +
Sbjct: 97 TVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPD 156
Query: 126 DNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDF 185
+VS D +K W + H V + F + + D TVKVWD
Sbjct: 157 GRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDV 216
Query: 186 ARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLC 245
+ + H V ++ +HP+ + LV+ DS +K+ D GR L + HGH+
Sbjct: 217 RTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATT 276
Query: 246 VKWNQNGNWVLTASKDQIIKLY 267
V +++ G + + D+ + ++
Sbjct: 277 VAFSRTGEYFASGGSDEQVMVW 298
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 75/163 (46%), Gaps = 2/163 (1%)
Query: 191 ERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQ 250
ER GH V SVD+ L SG DS + +W K F GHK+ V CV ++
Sbjct: 12 ERHFKGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFSP 71
Query: 251 NGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFHW 310
+G+ + + S+D+ ++++ E FR H V ++ + + FV+ S D ++ W
Sbjct: 72 SGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCS-DGQSFVTASDDKTVKVW 130
Query: 311 LVGHETPQVEIHNVHDNTVWDLAWHPIGYLLCSGSNDHTTKFW 353
+ + H N V + P G L+ S S+D T K W
Sbjct: 131 STHRQKFLFSLSQ-HINWVRCAKFSPDGRLIVSASDDKTVKLW 172
Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 278 FRGHRKDVTALAWHPFHEEYFVSGSLDGSIFHWLVGHETPQVEIHNV--HDNTVWDLAWH 335
F+GHR VT++ + + + SGS+D + W H PQ + H + V + +
Sbjct: 15 FKGHRDAVTSVDF-SLNTKQLASGSMDSCLMVW---HMKPQTRAYRFAGHKDAVTCVNFS 70
Query: 336 PIGYLLCSGSNDHTTKFWCRNRPGDT 361
P G+LL SGS D T + W N G++
Sbjct: 71 PSGHLLASGSRDKTVRIWVPNVKGES 96
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 54/122 (44%), Gaps = 2/122 (1%)
Query: 236 FHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHE 295
F GH++ V V ++ N + + S D + ++ ++ F GH+ VT + + P
Sbjct: 15 FKGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFSP-SG 73
Query: 296 EYFVSGSLDGSIFHWLVGHETPQVEIHNVHDNTVWDLAWHPIGYLLCSGSNDHTTKFWCR 355
SGS D ++ W V + + + H TV + + G + S+D T K W
Sbjct: 74 HLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWST 132
Query: 356 NR 357
+R
Sbjct: 133 HR 134
>sp|Q5A7Q3|PRP46_CANAL Pre-mRNA-splicing factor PRP46 OS=Candida albicans (strain SC5314 /
ATCC MYA-2876) GN=PRP46 PE=3 SV=1
Length = 389
Score = 110 bits (276), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 123/260 (47%), Gaps = 23/260 (8%)
Query: 112 AHDHAIRSMVWSHNDN-WMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLK 170
AH IR++ N W V+G IK W N++KA + H +R L +
Sbjct: 83 AHQGWIRAIALDEITNKWYVTGSADSTIKIWDFENNSLKAVLTGHVLGIRSLCISKRHPY 142
Query: 171 FCSCSDDTTVKVWDFARCQEE-----RSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLW 225
S +D +++ WD R + RS GH V S+ HP +L SGGKD +V++W
Sbjct: 143 LFSGGEDKSLRCWDLERSNSDAGCQIRSYHGHLGGVYSIGLHPELDVLFSGGKDCVVRVW 202
Query: 226 DAKSGRELCSFHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDV 285
D +S E + GH N + ++ + N V+T+S D I+L+D+R K H K +
Sbjct: 203 DIRSRVEAMTLLGHTNDITSIETDYNDPQVITSSMDGTIRLWDLRKSKTELLITNHSKSI 262
Query: 286 TALAWHPFHEEYFVSGSLDGSIFHWLVGHETPQVEIHNV----------HDNT--VWDLA 333
++ HP E FVSG +G I WL+ P+ E+ N DN+ + LA
Sbjct: 263 RSMKSHP-KEATFVSGDSNGEIKQWLL----PKGELLNEFGTSQLSPNQRDNSRIINTLA 317
Query: 334 WHPIGYLLCSGSNDHTTKFW 353
+P+ L SG +D +F+
Sbjct: 318 INPVTNTLFSGYDDGKLEFY 337
Score = 38.9 bits (89), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 86 RLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGDDGGAIKYW 141
++IT S G LW+ + E+++ H +IRSM + VSGD G IK W
Sbjct: 231 QVITSSMDGTIRLWDLRKSKTELLITNHSKSIRSMKSHPKEATFVSGDSNGEIKQW 286
Score = 33.1 bits (74), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 29/153 (18%), Positives = 63/153 (41%), Gaps = 9/153 (5%)
Query: 87 LITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGDDGGAIKYWQNNMN 146
L +G + +W+ +S M L H + I S+ +ND +++ G I+ W +
Sbjct: 190 LFSGGKDCVVRVWDIRSRVEAMTLLGHTNDITSIETDYNDPQVITSSMDGTIRLWDLRKS 249
Query: 147 NVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVW---------DFARCQEERSLTGH 197
+ + H +S+R + + F S + +K W +F Q + +
Sbjct: 250 KTELLITNHSKSIRSMKSHPKEATFVSGDSNGEIKQWLLPKGELLNEFGTSQLSPNQRDN 309
Query: 198 GWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSG 230
+ ++ +P + L SG D ++ ++ +G
Sbjct: 310 SRIINTLAINPVTNTLFSGYDDGKLEFYNYTTG 342
>sp|Q803D2|LIS1B_DANRE Lissencephaly-1 homolog B OS=Danio rerio GN=pafah1b1b PE=2 SV=3
Length = 410
Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 120/245 (48%), Gaps = 22/245 (8%)
Query: 129 MVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARC 188
MVS + IK W + + H +SV+D+SF +T SCS D T+K+WDF
Sbjct: 123 MVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQGF 182
Query: 189 QEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKW 248
+ R++ GH +V SV P +VS +D +K+W+ +G + +F GH+ V V+
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRP 242
Query: 249 NQNGNWVLTASKDQIIKLYDIRAMKELES-FRGHRKDVTALAW-----HPFHEE------ 296
NQ+G + + S DQ ++++ + A KE ++ R H V ++W HP E
Sbjct: 243 NQDGTLLASCSNDQTVRVW-VVATKECKAELREHEHVVECISWAPESAHPTISEATGSEN 301
Query: 297 --------YFVSGSLDGSIFHWLVGHETPQVEIHNVHDNTVWDLAWHPIGYLLCSGSNDH 348
+ +SGS D +I W + + + HDN V + +HP G + S ++D
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVG-HDNWVRGVLFHPGGRFVVSCADDK 360
Query: 349 TTKFW 353
T + W
Sbjct: 361 TLRIW 365
Score = 99.4 bits (246), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 119/257 (46%), Gaps = 21/257 (8%)
Query: 74 SINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGD 133
S+ + + TG+ L + S LW+ Q F + HDH + S+ N + +VS
Sbjct: 152 SVQDISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAS 211
Query: 134 DGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERS 193
+K W+ + H+E VR + + SCS+D TV+VW A + +
Sbjct: 212 RDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAE 271
Query: 194 LTGHGWDVKSVDW-----HPTKS---------------LLVSGGKDSLVKLWDAKSGREL 233
L H V+ + W HPT S L+SG +D +K+WD +G L
Sbjct: 272 LREHEHVVECISWAPESAHPTISEATGSENKKSGKPGPFLLSGSRDKTIKMWDISTGMCL 331
Query: 234 CSFHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPF 293
+ GH N V V ++ G +V++ + D+ ++++D + + +++ H VT+L +H
Sbjct: 332 MTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDYKNKRCMKTLSAHEHFVTSLDFHK- 390
Query: 294 HEEYFVSGSLDGSIFHW 310
Y V+GS+D ++ W
Sbjct: 391 ASPYVVTGSVDQTVKVW 407
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 87/164 (53%), Gaps = 2/164 (1%)
Query: 190 EERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWN 249
E+ +L+GH V V +HP SL+VS +D+ +K+WD ++G + GH + V + ++
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFD 159
Query: 250 QNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFH 309
Q G + + S D IKL+D + + + + GH +V+++A P + ++ VS S D ++
Sbjct: 160 QTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP-NGDHIVSASRDKTMKM 218
Query: 310 WLVGHETPQVEIHNVHDNTVWDLAWHPIGYLLCSGSNDHTTKFW 353
W V V+ H V + + G LL S SND T + W
Sbjct: 219 WEVA-TGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVW 261
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/217 (20%), Positives = 89/217 (41%), Gaps = 20/217 (9%)
Query: 74 SINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGD 133
+++ V P G +++ S+ +W + H +R + + + + S
Sbjct: 194 NVSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLLASCS 253
Query: 134 DGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLK--------------------FCS 173
+ ++ W KA H+ V +S+ S
Sbjct: 254 NDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTISEATGSENKKSGKPGPFLLS 313
Query: 174 CSDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGREL 233
S D T+K+WD + +L GH V+ V +HP +VS D +++WD K+ R +
Sbjct: 314 GSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDYKNKRCM 373
Query: 234 CSFHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIR 270
+ H++ V + +++ +V+T S DQ +K+++ R
Sbjct: 374 KTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKVWECR 410
>sp|B3S4I5|LIS1_TRIAD Lissencephaly-1 homolog OS=Trichoplax adhaerens GN=TRIADDRAFT_50647
PE=3 SV=1
Length = 409
Score = 110 bits (275), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 124/265 (46%), Gaps = 24/265 (9%)
Query: 110 LQAHDHAIRSMVWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDL 169
L H I +V+ N MVS + ++K W + + H +SV+DL+F +
Sbjct: 103 LSGHRSPITCVVFHPVYNVMVSSSEDASMKIWDYESGDFERTLRGHTDSVQDLAFDSSGK 162
Query: 170 KFCSCSDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKS 229
S S D TVK+WDF + +L GH +V SV + P+ L+S +D +K+W+ +
Sbjct: 163 LLASSSADMTVKIWDFQTFECRMTLRGHDHNVSSVCFLPSGDFLLSSSRDKTIKMWEVAT 222
Query: 230 GRELCSFHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALA 289
G + +F GH+ V V +G+ + + S DQ ++++ + + + E RGH V +
Sbjct: 223 GYCVYNFEGHREWVRRVAVASDGSLMASCSNDQTVRIWSLSSKECKEELRGHEHVVECIK 282
Query: 290 WHP-----FHEE--------------YFVSGSLDGSIFHWLVGHETPQVEIHNV--HDNT 328
W P + E + SGS D I W V T V + ++ HDN
Sbjct: 283 WAPESCNRYINEASGTEVPKGQKSGPFLASGSRDRVIKIWDV---TTAVCLFSLVGHDNW 339
Query: 329 VWDLAWHPIGYLLCSGSNDHTTKFW 353
V LA+H G L S S+D T K W
Sbjct: 340 VRGLAFHAGGKYLTSASDDKTIKIW 364
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 135/310 (43%), Gaps = 23/310 (7%)
Query: 67 SLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHND 126
SL+ +R I V++ P +++ S+ +W+ +S +FE L+ H +++ + + +
Sbjct: 102 SLSGHRSPITCVVFHPVYNVMVSSSEDASMKIWDYESGDFERTLRGHTDSVQDLAFDSSG 161
Query: 127 NWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFA 186
+ S +K W + H +V + F + S S D T+K+W+ A
Sbjct: 162 KLLASSSADMTVKIWDFQTFECRMTLRGHDHNVSSVCFLPSGDFLLSSSRDKTIKMWEVA 221
Query: 187 RCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCV 246
+ GH V+ V SL+ S D V++W S GH+++V C+
Sbjct: 222 TGYCVYNFEGHREWVRRVAVASDGSLMASCSNDQTVRIWSLSSKECKEELRGHEHVVECI 281
Query: 247 KW--------------------NQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVT 286
KW ++G ++ + S+D++IK++D+ L S GH V
Sbjct: 282 KWAPESCNRYINEASGTEVPKGQKSGPFLASGSRDRVIKIWDVTTAVCLFSLVGHDNWVR 341
Query: 287 ALAWHPFHEEYFVSGSLDGSIFHWLVGHETPQVEIHNVHDNTVWDLAWHPIGYLLCSGSN 346
LA+H +Y S S D +I W + H+ + H++ V + +H + +GS
Sbjct: 342 GLAFHA-GGKYLTSASDDKTIKIWELRHKRCSKSL-EAHNHFVTTIDFHRSSPFVITGSV 399
Query: 347 DHTTKFW-CR 355
D T K W CR
Sbjct: 400 DLTIKVWECR 409
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 88/166 (53%), Gaps = 6/166 (3%)
Query: 190 EERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWN 249
E+ SL+GH + V +HP +++VS +D+ +K+WD +SG + GH + V + ++
Sbjct: 99 EKHSLSGHRSPITCVVFHPVYNVMVSSSEDASMKIWDYESGDFERTLRGHTDSVQDLAFD 158
Query: 250 QNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFH 309
+G + ++S D +K++D + + + RGH +V+++ + P ++ +S S D +I
Sbjct: 159 SSGKLLASSSADMTVKIWDFQTFECRMTLRGHDHNVSSVCFLP-SGDFLLSSSRDKTIKM 217
Query: 310 WLVGHETPQVEIHNVHDNTVW--DLAWHPIGYLLCSGSNDHTTKFW 353
W V ++N + W +A G L+ S SND T + W
Sbjct: 218 WEVA---TGYCVYNFEGHREWVRRVAVASDGSLMASCSNDQTVRIW 260
>sp|B5X3Z6|LIS1A_SALSA Lissencephaly-1 homolog A OS=Salmo salar GN=pafah1b1-1 PE=2 SV=1
Length = 410
Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 115/244 (47%), Gaps = 20/244 (8%)
Query: 129 MVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARC 188
MVS + IK W + + H +SV+D+SF T SCS D T+K+WDF
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGF 182
Query: 189 QEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKW 248
+ R++ GH +V SV P +VS +D +K+W+ +G + +F GH+ V V+
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRP 242
Query: 249 NQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAW-----HPFHEE------- 296
NQ+G + + S DQ ++++ + + + R H V ++W HP E
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVASKECKAELREHEHVVECISWAPESAHPTILEATGSESK 302
Query: 297 -------YFVSGSLDGSIFHWLVGHETPQVEIHNVHDNTVWDLAWHPIGYLLCSGSNDHT 349
+ +SGS D +I W V + + HDN V + HP G + S ++D T
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSIGMCLMTLVG-HDNWVRGMLVHPGGKFILSCADDKT 361
Query: 350 TKFW 353
+ W
Sbjct: 362 LRIW 365
Score = 95.9 bits (237), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 119/257 (46%), Gaps = 21/257 (8%)
Query: 74 SINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGD 133
S+ + + TG+ L + S LW+ Q F + HDH + S+ N + +VS
Sbjct: 152 SVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAS 211
Query: 134 DGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERS 193
IK W+ + H+E VR + + SCS+D TV+VW A + +
Sbjct: 212 RDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVASKECKAE 271
Query: 194 LTGHGWDVKSVDW-----HPT----------KS-----LLVSGGKDSLVKLWDAKSGREL 233
L H V+ + W HPT KS L+SG +D +K+WD G L
Sbjct: 272 LREHEHVVECISWAPESAHPTILEATGSESKKSGKPGPFLLSGSRDKTIKMWDVSIGMCL 331
Query: 234 CSFHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPF 293
+ GH N V + + G ++L+ + D+ ++++D + + +++ H VT+L +H
Sbjct: 332 MTLVGHDNWVRGMLVHPGGKFILSCADDKTLRIWDYKNKRCMKTLGAHEHFVTSLDFHK- 390
Query: 294 HEEYFVSGSLDGSIFHW 310
+ Y V+GS+D ++ W
Sbjct: 391 NAPYVVTGSVDQTVKVW 407
Score = 73.2 bits (178), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 86/164 (52%), Gaps = 2/164 (1%)
Query: 190 EERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWN 249
E+ +L+GH V V +HP S++VS +D+ +K+WD ++G + GH + V + ++
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD 159
Query: 250 QNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFH 309
G + + S D IKL+D + + + + GH +V+++A P + ++ VS S D +I
Sbjct: 160 HTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP-NGDHIVSASRDKTIKM 218
Query: 310 WLVGHETPQVEIHNVHDNTVWDLAWHPIGYLLCSGSNDHTTKFW 353
W V V+ H V + + G L+ S SND T + W
Sbjct: 219 WEVA-TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 57.0 bits (136), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 92/217 (42%), Gaps = 20/217 (9%)
Query: 74 SINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGD 133
+++ V P G +++ S+ +W + H +R + + + + S
Sbjct: 194 NVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASCS 253
Query: 134 DGGAIKYWQNNMNNVKANKSAHKESVRDLSFCR-----TDLK---------------FCS 173
+ ++ W KA H+ V +S+ T L+ S
Sbjct: 254 NDQTVRVWVVASKECKAELREHEHVVECISWAPESAHPTILEATGSESKKSGKPGPFLLS 313
Query: 174 CSDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGREL 233
S D T+K+WD + +L GH V+ + HP ++S D +++WD K+ R +
Sbjct: 314 GSRDKTIKMWDVSIGMCLMTLVGHDNWVRGMLVHPGGKFILSCADDKTLRIWDYKNKRCM 373
Query: 234 CSFHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIR 270
+ H++ V + +++N +V+T S DQ +K+++ R
Sbjct: 374 KTLGAHEHFVTSLDFHKNAPYVVTGSVDQTVKVWECR 410
>sp|Q9WUC8|PLRG1_RAT Pleiotropic regulator 1 OS=Rattus norvegicus GN=Plrg1 PE=2 SV=1
Length = 514
Score = 109 bits (272), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 138/333 (41%), Gaps = 30/333 (9%)
Query: 109 ILQAHDHAIRSMVWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTD 168
++ H +R + + W V+G IK W +K + + H +VR +
Sbjct: 199 VISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRS 258
Query: 169 LKFCSCSDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAK 228
SC +D VK WD + R GH V +D HPT +LV+ +DS ++WD +
Sbjct: 259 PYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVR 318
Query: 229 SGRELCSFHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTAL 288
+ + + GH N V V+ ++T S D I+L+D+ A K + H+K V A+
Sbjct: 319 TKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAV 378
Query: 289 AWHPFHEEYFVSGSLDGSIFHWLV--GHETPQVEIHNVHDNTVWDLAWHPIGYLLCSGSN 346
HP H F SGS D +I W G + HN NT LA + G +L SG++
Sbjct: 379 VLHPLHYT-FASGSPD-NIKQWKFPDGGFIQNLSGHNAIINT---LAVNTDG-VLVSGAD 432
Query: 347 DHTTKFWCRNRPGDTARDKFNMGQNQGYGEQNAVFAGRMPGNFPLPEGPTTPGPFAPGLT 406
+ T W GY Q V A PG+ + G FA
Sbjct: 433 NGTMHLW---------------DWRTGYNFQR-VHAAVQPGSL-----DSESGIFACAFD 471
Query: 407 RNEGTIPGVGVAMPLSIPSFDSSAQGEQKQPLS 439
R+E + + + D +A E+ P+S
Sbjct: 472 RSESRLLTAEADKTIKVYREDETAT-EETHPVS 503
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 96/224 (42%), Gaps = 3/224 (1%)
Query: 87 LITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGDDGGAIKYWQNNMN 146
+TGS +W+ S ++ L H +R ++ S ++ S + +K W N
Sbjct: 219 FVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYN 278
Query: 147 NVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERSLTGHGWDVKSVDW 206
V + H +V L T +CS D+T ++WD +L+GH V +V
Sbjct: 279 KVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRC 338
Query: 207 HPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQNGNWVLTASKDQIIKL 266
+ +++G D+ ++LWD +G+ + HK V V + + S D IK
Sbjct: 339 QAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPLHYTFASGSPDN-IKQ 397
Query: 267 YDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFHW 310
+ +++ GH + LA + + VSG+ +G++ W
Sbjct: 398 WKFPDGGFIQNLSGHNAIINTLAVNT--DGVLVSGADNGTMHLW 439
Score = 63.5 bits (153), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 8/165 (4%)
Query: 192 RSLTGH-GWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQ 250
R ++GH GW V+ + P V+G D +K+WD SG+ S GH + V V +
Sbjct: 198 RVISGHLGW-VRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVST 256
Query: 251 NGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFHW 310
++ + +D+ +K +D+ K + + GH V L HP + V+ S D + W
Sbjct: 257 RSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPT-IDVLVTCSRDSTARIW 315
Query: 311 LVGHETPQVEIHNV--HDNTVWDLAWHPIGYLLCSGSNDHTTKFW 353
V + +H + H N V + + +GS+D T + W
Sbjct: 316 DV---RTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLW 357
Score = 59.3 bits (142), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 87/194 (44%), Gaps = 10/194 (5%)
Query: 82 PTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGDDGGAIKYW 141
PT L+T S+ +W+ ++ L H +A+ ++ + +++G I+ W
Sbjct: 298 PTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLW 357
Query: 142 QNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERSLTGHGWDV 201
+ + HK+SVR + F S S D +K W F ++L+GH +
Sbjct: 358 DLVAGKTRVTLTNHKKSVRAVVLHPLHYTFASGSPDN-IKQWKFPDGGFIQNLSGHNAII 416
Query: 202 KSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHG--------HKNMVLCVKWNQNGN 253
++ + T +LVSG + + LWD ++G H ++ + ++++ +
Sbjct: 417 NTLAVN-TDGVLVSGADNGTMHLWDWRTGYNFQRVHAAVQPGSLDSESGIFACAFDRSES 475
Query: 254 WVLTASKDQIIKLY 267
+LTA D+ IK+Y
Sbjct: 476 RLLTAEADKTIKVY 489
>sp|Q7T394|LIS1A_DANRE Lissencephaly-1 homolog A OS=Danio rerio GN=pafah1b1a PE=2 SV=3
Length = 410
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 120/245 (48%), Gaps = 22/245 (8%)
Query: 129 MVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARC 188
+VS + IK W + + + H +SV+D+SF T SCS D T+K+WDF
Sbjct: 123 IVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGF 182
Query: 189 QEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKW 248
+ R++ GH +V SV P +VS +D +K+W+ +G + +F GH+ V V+
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRP 242
Query: 249 NQNGNWVLTASKDQIIKLYDIRAMKELES-FRGHRKDVTALAW-----HPFHEE------ 296
NQ+G + ++S DQ ++++ + A KE ++ R H V ++W HP E
Sbjct: 243 NQDGTLIASSSNDQTVRVW-VVATKECKAELREHEHVVECISWAPESAHPTILEATGSET 301
Query: 297 --------YFVSGSLDGSIFHWLVGHETPQVEIHNVHDNTVWDLAWHPIGYLLCSGSNDH 348
+ +SGS D +I W V + + HDN V + HP G + S ++D
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDVSIGMCLMTLVG-HDNWVRGVLVHPGGKYIVSCADDK 360
Query: 349 TTKFW 353
T + W
Sbjct: 361 TLRIW 365
Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 116/257 (45%), Gaps = 21/257 (8%)
Query: 74 SINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGD 133
S+ + + TG+ L + S LW+ Q F + HDH + S+ N + +VS
Sbjct: 152 SVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAS 211
Query: 134 DGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERS 193
IK W+ + H+E VR + + S S+D TV+VW A + +
Sbjct: 212 RDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVATKECKAE 271
Query: 194 LTGHGWDVKSVDW-----HPT----------KS-----LLVSGGKDSLVKLWDAKSGREL 233
L H V+ + W HPT KS L+SG +D +K+WD G L
Sbjct: 272 LREHEHVVECISWAPESAHPTILEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSIGMCL 331
Query: 234 CSFHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPF 293
+ GH N V V + G ++++ + D+ ++++D + + ++ H VT+L +H
Sbjct: 332 MTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWDYKNKRCTKTLSAHEHFVTSLDFHKT 391
Query: 294 HEEYFVSGSLDGSIFHW 310
Y V+GS+D ++ W
Sbjct: 392 -APYVVTGSVDQTVKVW 407
Score = 72.8 bits (177), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 86/164 (52%), Gaps = 2/164 (1%)
Query: 190 EERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWN 249
E+ +L+GH V V +HP S++VS +D+ +K+WD ++G + GH + V + ++
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFD 159
Query: 250 QNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFH 309
G + + S D IKL+D + + + + GH +V+++A P + ++ VS S D +I
Sbjct: 160 HTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP-NGDHIVSASRDKTIKM 218
Query: 310 WLVGHETPQVEIHNVHDNTVWDLAWHPIGYLLCSGSNDHTTKFW 353
W V V+ H V + + G L+ S SND T + W
Sbjct: 219 WEVA-TGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVW 261
Score = 57.4 bits (137), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 90/217 (41%), Gaps = 20/217 (9%)
Query: 74 SINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGD 133
+++ V P G +++ S+ +W + H +R + + + + S
Sbjct: 194 NVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASSS 253
Query: 134 DGGAIKYWQNNMNNVKANKSAHKESVRDLSFC------------RTDLK--------FCS 173
+ ++ W KA H+ V +S+ ++ K S
Sbjct: 254 NDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTILEATGSETKKSGKPGPFLLS 313
Query: 174 CSDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGREL 233
S D T+K+WD + +L GH V+ V HP +VS D +++WD K+ R
Sbjct: 314 GSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWDYKNKRCT 373
Query: 234 CSFHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIR 270
+ H++ V + +++ +V+T S DQ +K+++ R
Sbjct: 374 KTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>sp|B5X3C4|LIS1B_SALSA Lissencephaly-1 homolog B OS=Salmo salar GN=pafah1b1-2 PE=2 SV=1
Length = 410
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 116/244 (47%), Gaps = 20/244 (8%)
Query: 129 MVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARC 188
MV+ + IK W + + H +SV+D+SF +T SCS D T+K+WDF
Sbjct: 123 MVTSSEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQGF 182
Query: 189 QEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKW 248
+ R++ GH +V SV P +VS +D +K+W+ +G + +F GH+ V V+
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRP 242
Query: 249 NQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAW-----HPFHEE------- 296
NQ+G+ + + S DQ ++++ + + R H V +AW HP E
Sbjct: 243 NQDGSLIASCSNDQTVRVWVATSKECKAELREHEHVVECIAWAPDTAHPTILEATSSESK 302
Query: 297 -------YFVSGSLDGSIFHWLVGHETPQVEIHNVHDNTVWDLAWHPIGYLLCSGSNDHT 349
+ +SGS D +I W + + + HDN V + HP G + S ++D T
Sbjct: 303 KNGKSGPFLLSGSRDKTIKMWDISTGMCLMTLVG-HDNWVRGVLVHPGGRFIVSCADDKT 361
Query: 350 TKFW 353
+ W
Sbjct: 362 LRIW 365
Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 117/257 (45%), Gaps = 21/257 (8%)
Query: 74 SINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGD 133
S+ + + TG+ L + S LW+ Q F + HDH + S+ N + +VS
Sbjct: 152 SVQDISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAS 211
Query: 134 DGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERS 193
IK W+ + H+E VR + + SCS+D TV+VW + +
Sbjct: 212 RDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGSLIASCSNDQTVRVWVATSKECKAE 271
Query: 194 LTGHGWDVKSVDW-----HPT-------------KS--LLVSGGKDSLVKLWDAKSGREL 233
L H V+ + W HPT KS L+SG +D +K+WD +G L
Sbjct: 272 LREHEHVVECIAWAPDTAHPTILEATSSESKKNGKSGPFLLSGSRDKTIKMWDISTGMCL 331
Query: 234 CSFHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPF 293
+ GH N V V + G ++++ + D+ ++++D + + +++ H VT+L H
Sbjct: 332 MTLVGHDNWVRGVLVHPGGRFIVSCADDKTLRIWDYKNKRCMKTLCAHEHFVTSLDMHQT 391
Query: 294 HEEYFVSGSLDGSIFHW 310
Y V+GS+D ++ W
Sbjct: 392 -APYVVTGSVDQTVKVW 407
Score = 72.8 bits (177), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 86/164 (52%), Gaps = 2/164 (1%)
Query: 190 EERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWN 249
E +L+GH V V +HP S++V+ +D+ +K+WD ++G + GH + V + ++
Sbjct: 100 ERYALSGHRSPVTRVIFHPVFSVMVTSSEDATIKVWDYEAGDFERTLKGHTDSVQDISFD 159
Query: 250 QNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFH 309
Q G + + S D IKL+D + + + + GH +V+++A P + ++ VS S D +I
Sbjct: 160 QTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP-NGDHIVSASRDKTIKM 218
Query: 310 WLVGHETPQVEIHNVHDNTVWDLAWHPIGYLLCSGSNDHTTKFW 353
W V V+ H V + + G L+ S SND T + W
Sbjct: 219 WEVA-TGYCVKTFTGHREWVRMVRPNQDGSLIASCSNDQTVRVW 261
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 91/217 (41%), Gaps = 20/217 (9%)
Query: 74 SINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGD 133
+++ V P G +++ S+ +W + H +R + + + + + S
Sbjct: 194 NVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGSLIASCS 253
Query: 134 DGGAIKYWQNNMNNVKANKSAHKESVRDLSFC------------RTDLK--------FCS 173
+ ++ W KA H+ V +++ ++ K S
Sbjct: 254 NDQTVRVWVATSKECKAELREHEHVVECIAWAPDTAHPTILEATSSESKKNGKSGPFLLS 313
Query: 174 CSDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGREL 233
S D T+K+WD + +L GH V+ V HP +VS D +++WD K+ R +
Sbjct: 314 GSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLVHPGGRFIVSCADDKTLRIWDYKNKRCM 373
Query: 234 CSFHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIR 270
+ H++ V + +Q +V+T S DQ +K+++ R
Sbjct: 374 KTLCAHEHFVTSLDMHQTAPYVVTGSVDQTVKVWECR 410
>sp|Q4RJN5|LIS1_TETNG Lissencephaly-1 homolog OS=Tetraodon nigroviridis GN=pafah1b1 PE=3
SV=1
Length = 410
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 114/244 (46%), Gaps = 20/244 (8%)
Query: 129 MVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARC 188
MVS + IK W + + H +SV+D+SF T SCS D T+K+WDF
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDLTGKLLASCSADMTIKLWDFQSF 182
Query: 189 QEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKW 248
+ R++ GH +V SV P ++S +D +K+W+ +G + +F GH+ V V+
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIISASRDKTMKMWEVATGYCVKTFTGHREWVRMVRP 242
Query: 249 NQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEE------------ 296
NQ+G + + S DQ ++++ + + + R H V ++W P
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVASKECKAELREHEHVVECISWAPESAHPTILDATSSESK 302
Query: 297 -------YFVSGSLDGSIFHWLVGHETPQVEIHNVHDNTVWDLAWHPIGYLLCSGSNDHT 349
+ +SGS D +I W V + + HDN V + +HP G + + ++D T
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVG-HDNWVRGVLFHPGGKFIVTCADDKT 361
Query: 350 TKFW 353
+ W
Sbjct: 362 LRIW 365
Score = 80.1 bits (196), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 134/310 (43%), Gaps = 23/310 (7%)
Query: 67 SLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHND 126
+L+ +R + RV++ P +++ S+ +W+ ++ +FE L+ H +++ + +
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDLTG 162
Query: 127 NWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFA 186
+ S IK W H +V ++ S S D T+K+W+ A
Sbjct: 163 KLLASCSADMTIKLWDFQSFECIRTMHGHDHNVSSVAIMPNGDHIISASRDKTMKMWEVA 222
Query: 187 RCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCV 246
++ TGH V+ V + +L+ S D V++W S H+++V C+
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVASKECKAELREHEHVVECI 282
Query: 247 KW-----------------NQNGN---WVLTASKDQIIKLYDIRAMKELESFRGHRKDVT 286
W ++G ++L+ S+D+ IK++D+ L + GH V
Sbjct: 283 SWAPESAHPTILDATSSESKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVR 342
Query: 287 ALAWHPFHEEYFVSGSLDGSIFHWLVGHETPQVEIHNVHDNTVWDLAWHPIGYLLCSGSN 346
+ +HP ++ V+ + D ++ W ++ + H++ V L +H + +GS
Sbjct: 343 GVLFHP-GGKFIVTCADDKTLRIWDYKNKRCMKTL-CAHEHFVTSLDFHKAAPYVVTGSV 400
Query: 347 DHTTKFW-CR 355
D T K W CR
Sbjct: 401 DQTVKVWECR 410
Score = 70.5 bits (171), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 86/164 (52%), Gaps = 2/164 (1%)
Query: 190 EERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWN 249
E +L+GH V V +HP S++VS +D+ +K+WD ++G + GH + V + ++
Sbjct: 100 ERYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD 159
Query: 250 QNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFH 309
G + + S D IKL+D ++ + + + GH +V+++A P + ++ +S S D ++
Sbjct: 160 LTGKLLASCSADMTIKLWDFQSFECIRTMHGHDHNVSSVAIMP-NGDHIISASRDKTMKM 218
Query: 310 WLVGHETPQVEIHNVHDNTVWDLAWHPIGYLLCSGSNDHTTKFW 353
W V V+ H V + + G L+ S SND T + W
Sbjct: 219 WEVA-TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
>sp|Q9V3J8|WDS_DROME Protein will die slowly OS=Drosophila melanogaster GN=wds PE=2 SV=1
Length = 361
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 130/285 (45%), Gaps = 6/285 (2%)
Query: 74 SINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGD 133
+++ V ++P G L + S +W FE + H I + WS + +VSG
Sbjct: 74 AVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGS 133
Query: 134 DGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERS 193
D +K W+ + H V +F S S D +V++WD + ++
Sbjct: 134 DDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKT 193
Query: 194 LTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKN-MVLCVKWNQNG 252
L H V +V ++ SL+VS D L ++WD SG+ L + N V VK++ NG
Sbjct: 194 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG 253
Query: 253 NWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALA--WHPFHEEYFVSGSLDGSIFHW 310
++L A+ D +KL+D K L+++ GH+ + + + ++ VSGS D ++ W
Sbjct: 254 KYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIW 313
Query: 311 LVGHETPQVEIHNVHDNTVWDLAWHPIGYLLCSGS--NDHTTKFW 353
+ V+ H +TV A HP ++ S + ND T K W
Sbjct: 314 NL-QSKEVVQKLQGHTDTVLCTACHPTENIIASAALENDKTIKLW 357
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 119/261 (45%), Gaps = 12/261 (4%)
Query: 58 SFAAKFVHTSLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAI 117
++ KF T ++ ++ I+ V W+ R L++GS +W + L+ H + +
Sbjct: 101 AYDGKFEKT-ISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYV 159
Query: 118 RSMVWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDD 177
++ N +VSG +++ W AH + V + F R S S D
Sbjct: 160 FCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 219
Query: 178 TTVKVWDFARCQEERSLTGHGWD---VKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELC 234
++WD A Q ++L D V V + P +++ D+ +KLWD G+ L
Sbjct: 220 GLCRIWDTASGQCLKTLIDD--DNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLK 277
Query: 235 SFHGHKNMVLCVKWN---QNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWH 291
++ GHKN C+ N G W+++ S+D ++ ++++++ + ++ +GH V A H
Sbjct: 278 TYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTVLCTACH 337
Query: 292 PFHEEYFVSGSL--DGSIFHW 310
P E S +L D +I W
Sbjct: 338 P-TENIIASAALENDKTIKLW 357
>sp|Q90ZL4|LIS1_XENLA Lissencephaly-1 homolog OS=Xenopus laevis GN=pafah1b1 PE=2 SV=3
Length = 410
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 118/245 (48%), Gaps = 22/245 (8%)
Query: 129 MVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARC 188
MV+ + IK W + + H +SV+D+SF + SCS D T+K+WDF
Sbjct: 123 MVTASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF 182
Query: 189 QEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKW 248
+ R++ GH +V SV P +VS +D +K+W+ ++G + +F GH+ V V+
Sbjct: 183 ECLRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRP 242
Query: 249 NQNGNWVLTASKDQIIKLYDIRAMKELES-FRGHRKDVTALAWHPFHEE----------- 296
NQ+G + + S DQ ++++ + A KE ++ R H V ++W P
Sbjct: 243 NQDGTLIASCSNDQTVRVW-VVATKECKAELREHEHVVECISWAPESSYSTISDATGSET 301
Query: 297 --------YFVSGSLDGSIFHWLVGHETPQVEIHNVHDNTVWDLAWHPIGYLLCSGSNDH 348
+ +SGS D +I W + + + HDN V + +HP G + S ++D
Sbjct: 302 KRSGKPGPFLLSGSRDKTIKMWDISIGMCLMTLVG-HDNWVRGVQFHPGGKFILSCADDK 360
Query: 349 TTKFW 353
T + W
Sbjct: 361 TIRIW 365
Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 135/310 (43%), Gaps = 23/310 (7%)
Query: 67 SLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHND 126
+L+ +R + RV++ P ++T S+ +W+ ++ +FE L+ H +++ + + H+
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVTASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query: 127 NWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFA 186
+ S IK W H +V ++ S S D T+K+W+
Sbjct: 163 KLLASCSADMTIKLWDFQGFECLRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 222
Query: 187 RCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCV 246
++ TGH V+ V + +L+ S D V++W + H+++V C+
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECI 282
Query: 247 KW--------------------NQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVT 286
W + G ++L+ S+D+ IK++DI L + GH V
Sbjct: 283 SWAPESSYSTISDATGSETKRSGKPGPFLLSGSRDKTIKMWDISIGMCLMTLVGHDNWVR 342
Query: 287 ALAWHPFHEEYFVSGSLDGSIFHWLVGHETPQVEIHNVHDNTVWDLAWHPIGYLLCSGSN 346
+ +HP ++ +S + D +I W ++ + N H++ V L +H + +GS
Sbjct: 343 GVQFHP-GGKFILSCADDKTIRIWDYKNKRCMKTL-NAHEHFVTSLDFHKTAPYVVTGSV 400
Query: 347 DHTTKFW-CR 355
D T K W CR
Sbjct: 401 DQTVKVWECR 410
Score = 72.4 bits (176), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 87/164 (53%), Gaps = 2/164 (1%)
Query: 190 EERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWN 249
E+ +L+GH V V +HP S++V+ +D+ +K+WD ++G + GH + V + ++
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVMVTASEDATIKVWDYETGDFERTLKGHTDSVQDISFD 159
Query: 250 QNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFH 309
+G + + S D IKL+D + + L + GH +V+++A P + ++ VS S D +I
Sbjct: 160 HSGKLLASCSADMTIKLWDFQGFECLRTMHGHDHNVSSVAIMP-NGDHIVSASRDKTIKM 218
Query: 310 WLVGHETPQVEIHNVHDNTVWDLAWHPIGYLLCSGSNDHTTKFW 353
W V V+ H V + + G L+ S SND T + W
Sbjct: 219 WEV-QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
>sp|Q6NZH4|LIS1_XENTR Lissencephaly-1 homolog OS=Xenopus tropicalis GN=pafah1b1 PE=2 SV=3
Length = 410
Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 118/245 (48%), Gaps = 22/245 (8%)
Query: 129 MVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARC 188
MV+ + IK W + + H +SV+D+SF + SCS D T+K+WDF
Sbjct: 123 MVTASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF 182
Query: 189 QEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKW 248
+ R++ GH +V SV P +VS +D +K+W+ ++G + +F GH+ V V+
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRP 242
Query: 249 NQNGNWVLTASKDQIIKLYDIRAMKELES-FRGHRKDVTALAWHPFHEE----------- 296
NQ+G + + S DQ ++++ + A KE ++ R H V ++W P
Sbjct: 243 NQDGTLIASCSNDQTVRVW-VVATKECKAELREHEHVVECISWAPESSYSTISDATGSET 301
Query: 297 --------YFVSGSLDGSIFHWLVGHETPQVEIHNVHDNTVWDLAWHPIGYLLCSGSNDH 348
+ +SGS D +I W + + + HDN V + +HP G + S ++D
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDISIGMCLMTLVG-HDNWVRGVQFHPGGKFILSCADDK 360
Query: 349 TTKFW 353
T + W
Sbjct: 361 TIRIW 365
Score = 99.8 bits (247), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 117/257 (45%), Gaps = 21/257 (8%)
Query: 74 SINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGD 133
S+ + + +G+ L + S LW+ Q F + HDH + S+ N + +VS
Sbjct: 152 SVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAS 211
Query: 134 DGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERS 193
IK W+ + H+E VR + + SCS+D TV+VW A + +
Sbjct: 212 RDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAE 271
Query: 194 LTGHGWDVKSVDWHPTKS--------------------LLVSGGKDSLVKLWDAKSGREL 233
L H V+ + W P S L+SG +D +K+WD G L
Sbjct: 272 LREHEHVVECISWAPESSYSTISDATGSETKKSGKPGPFLLSGSRDKTIKMWDISIGMCL 331
Query: 234 CSFHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPF 293
+ GH N V V+++ G ++L+ + D+ I+++D + + +++ H VT+L +H
Sbjct: 332 MTLVGHDNWVRGVQFHPGGKFILSCADDKTIRIWDYKNKRCMKTLNAHEHFVTSLDFHK- 390
Query: 294 HEEYFVSGSLDGSIFHW 310
Y V+GS+D ++ W
Sbjct: 391 TAPYVVTGSVDQTVKVW 407
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 87/164 (53%), Gaps = 2/164 (1%)
Query: 190 EERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWN 249
E+ +L+GH V V +HP S++V+ +D+ +K+WD ++G + GH + V + ++
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVMVTASEDATIKVWDYETGDFERTLKGHTDSVQDISFD 159
Query: 250 QNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFH 309
+G + + S D IKL+D + + + + GH +V+++A P + ++ VS S D +I
Sbjct: 160 HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP-NGDHIVSASRDKTIKM 218
Query: 310 WLVGHETPQVEIHNVHDNTVWDLAWHPIGYLLCSGSNDHTTKFW 353
W V V+ H V + + G L+ S SND T + W
Sbjct: 219 WEV-QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 63.2 bits (152), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 94/217 (43%), Gaps = 20/217 (9%)
Query: 74 SINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGD 133
+++ V P G +++ S+ +W Q+ H +R + + + + S
Sbjct: 194 NVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCS 253
Query: 134 DGGAIKYWQNNMNNVKANKSAHKESVRDLSFC------------RTDLK--------FCS 173
+ ++ W KA H+ V +S+ ++ K S
Sbjct: 254 NDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISDATGSETKKSGKPGPFLLS 313
Query: 174 CSDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGREL 233
S D T+K+WD + +L GH V+ V +HP ++S D +++WD K+ R +
Sbjct: 314 GSRDKTIKMWDISIGMCLMTLVGHDNWVRGVQFHPGGKFILSCADDKTIRIWDYKNKRCM 373
Query: 234 CSFHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIR 270
+ + H++ V + +++ +V+T S DQ +K+++ R
Sbjct: 374 KTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>sp|Q4V7Y7|KTNB1_XENLA Katanin p80 WD40 repeat-containing subunit B1 OS=Xenopus laevis
GN=katnb1 PE=1 SV=1
Length = 655
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 102/202 (50%), Gaps = 2/202 (0%)
Query: 110 LQAHDHAIRSMVWSHNDNWMV-SGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTD 168
+ AH ++ S+V + +V +G D + W N N + + H V + F ++
Sbjct: 16 IVAHGCSVSSVVLGRSSGRLVATGGDDCRVHLWSVNKPNCIMSLTGHTTPVESVRFNNSE 75
Query: 169 LKFCSCSDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAK 228
+ S ++++WD + R+L GH +V S+D+HP + SG D+ +KLWD +
Sbjct: 76 ELIVAGSQSGSLRIWDLEAAKILRTLMGHKANVSSLDFHPYGEFVASGSLDTNIKLWDVR 135
Query: 229 SGRELCSFHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTAL 288
+ + GH V C++++ +G W+ +AS D +KL+D+ A K + H+ V +
Sbjct: 136 RKGCVFRYKGHTQAVRCLRFSPDGKWLASASDDHSVKLWDLTAGKMMAELSEHKGPVNII 195
Query: 289 AWHPFHEEYFVSGSLDGSIFHW 310
+HP +E SGS D ++ W
Sbjct: 196 EFHP-NEYLLASGSADRTVRFW 216
Score = 92.8 bits (229), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 102/201 (50%), Gaps = 3/201 (1%)
Query: 154 AHKESVRDLSFCRTDLKFCSCS-DDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSL 212
AH SV + R+ + + DD V +W + SLTGH V+SV ++ ++ L
Sbjct: 18 AHGCSVSSVVLGRSSGRLVATGGDDCRVHLWSVNKPNCIMSLTGHTTPVESVRFNNSEEL 77
Query: 213 LVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIRAM 272
+V+G + +++WD ++ + L + GHK V + ++ G +V + S D IKL+D+R
Sbjct: 78 IVAGSQSGSLRIWDLEAAKILRTLMGHKANVSSLDFHPYGEFVASGSLDTNIKLWDVRRK 137
Query: 273 KELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFHWLVGHETPQVEIHNVHDNTVWDL 332
+ ++GH + V L + P ++ S S D S+ W + E+ H V +
Sbjct: 138 GCVFRYKGHTQAVRCLRFSP-DGKWLASASDDHSVKLWDLTAGKMMAELSE-HKGPVNII 195
Query: 333 AWHPIGYLLCSGSNDHTTKFW 353
+HP YLL SGS D T +FW
Sbjct: 196 EFHPNEYLLASGSADRTVRFW 216
Score = 86.3 bits (212), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 102/239 (42%), Gaps = 1/239 (0%)
Query: 73 CSINRV-LWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVS 131
CS++ V L +GR + TG LW+ N M L H + S+ +++++ +V+
Sbjct: 21 CSVSSVVLGRSSGRLVATGGDDCRVHLWSVNKPNCIMSLTGHTTPVESVRFNNSEELIVA 80
Query: 132 GDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEE 191
G G+++ W + HK +V L F S S DT +K+WD R
Sbjct: 81 GSQSGSLRIWDLEAAKILRTLMGHKANVSSLDFHPYGEFVASGSLDTNIKLWDVRRKGCV 140
Query: 192 RSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQN 251
GH V+ + + P L S D VKLWD +G+ + HK V ++++ N
Sbjct: 141 FRYKGHTQAVRCLRFSPDGKWLASASDDHSVKLWDLTAGKMMAELSEHKGPVNIIEFHPN 200
Query: 252 GNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFHW 310
+ + S D+ ++ +D+ + + G V A+ + F G ++ W
Sbjct: 201 EYLLASGSADRTVRFWDLEKFQLVGCTEGETIPVRAILFSNDGGCIFCGGKDSLRVYGW 259
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 83/197 (42%)
Query: 67 SLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHND 126
SL + + V + + ++ GSQSG +W+ ++ L H + S+ +
Sbjct: 58 SLTGHTTPVESVRFNNSEELIVAGSQSGSLRIWDLEAAKILRTLMGHKANVSSLDFHPYG 117
Query: 127 NWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFA 186
++ SG IK W H ++VR L F S SDD +VK+WD
Sbjct: 118 EFVASGSLDTNIKLWDVRRKGCVFRYKGHTQAVRCLRFSPDGKWLASASDDHSVKLWDLT 177
Query: 187 RCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCV 246
+ L+ H V +++HP + LL SG D V+ WD + + + G V +
Sbjct: 178 AGKMMAELSEHKGPVNIIEFHPNEYLLASGSADRTVRFWDLEKFQLVGCTEGETIPVRAI 237
Query: 247 KWNQNGNWVLTASKDQI 263
++ +G + KD +
Sbjct: 238 LFSNDGGCIFCGGKDSL 254
Score = 42.7 bits (99), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 48/115 (41%), Gaps = 2/115 (1%)
Query: 251 NGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFHW 310
+G V T D + L+ + + S GH V ++ ++ EE V+GS GS+ W
Sbjct: 32 SGRLVATGGDDCRVHLWSVNKPNCIMSLTGHTTPVESVRFNN-SEELIVAGSQSGSLRIW 90
Query: 311 LVGHETPQVEIHNVHDNTVWDLAWHPIGYLLCSGSNDHTTKFWCRNRPGDTARDK 365
+ + H V L +HP G + SGS D K W R G R K
Sbjct: 91 DL-EAAKILRTLMGHKANVSSLDFHPYGEFVASGSLDTNIKLWDVRRKGCVFRYK 144
>sp|Q6NVM2|KTNB1_XENTR Katanin p80 WD40 repeat-containing subunit B1 OS=Xenopus tropicalis
GN=katnb1 PE=2 SV=1
Length = 655
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 101/202 (50%), Gaps = 2/202 (0%)
Query: 110 LQAHDHAIRSMVWSHNDNWMV-SGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTD 168
+ AH ++ S+V + +V +G D + W N N + + H V + F +
Sbjct: 16 IVAHGSSVSSVVLGKSSGRLVATGGDDCRVNLWSVNKPNCIMSLTGHTTPVESVRFNNAE 75
Query: 169 LKFCSCSDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAK 228
+ S +++VWD + R+L GH +V S+D+HP + SG D+ +KLWD +
Sbjct: 76 ELIVAGSQSGSLRVWDLEAAKILRTLMGHKANVCSLDFHPYGDFVASGSLDTNIKLWDVR 135
Query: 229 SGRELCSFHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTAL 288
+ + GH V C++++ +G W+ +AS D +KL+D+ A K + H+ V +
Sbjct: 136 RKGCVFRYKGHTQAVRCLRFSPDGKWLASASDDHSVKLWDLTAGKMMAELSEHKGPVNII 195
Query: 289 AWHPFHEEYFVSGSLDGSIFHW 310
+HP +E SGS D ++ W
Sbjct: 196 EFHP-NEYLLASGSADRTVRFW 216
Score = 93.6 bits (231), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 102/201 (50%), Gaps = 3/201 (1%)
Query: 154 AHKESVRDLSFCRTDLKFCSCS-DDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSL 212
AH SV + ++ + + DD V +W + SLTGH V+SV ++ + L
Sbjct: 18 AHGSSVSSVVLGKSSGRLVATGGDDCRVNLWSVNKPNCIMSLTGHTTPVESVRFNNAEEL 77
Query: 213 LVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIRAM 272
+V+G + +++WD ++ + L + GHK V + ++ G++V + S D IKL+D+R
Sbjct: 78 IVAGSQSGSLRVWDLEAAKILRTLMGHKANVCSLDFHPYGDFVASGSLDTNIKLWDVRRK 137
Query: 273 KELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFHWLVGHETPQVEIHNVHDNTVWDL 332
+ ++GH + V L + P ++ S S D S+ W + E+ H V +
Sbjct: 138 GCVFRYKGHTQAVRCLRFSP-DGKWLASASDDHSVKLWDLTAGKMMAELSE-HKGPVNII 195
Query: 333 AWHPIGYLLCSGSNDHTTKFW 353
+HP YLL SGS D T +FW
Sbjct: 196 EFHPNEYLLASGSADRTVRFW 216
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 97/233 (41%)
Query: 78 VLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGDDGGA 137
VL +GR + TG LW+ N M L H + S+ +++ + +V+G G+
Sbjct: 27 VLGKSSGRLVATGGDDCRVNLWSVNKPNCIMSLTGHTTPVESVRFNNAEELIVAGSQSGS 86
Query: 138 IKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERSLTGH 197
++ W + HK +V L F S S DT +K+WD R GH
Sbjct: 87 LRVWDLEAAKILRTLMGHKANVCSLDFHPYGDFVASGSLDTNIKLWDVRRKGCVFRYKGH 146
Query: 198 GWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQNGNWVLT 257
V+ + + P L S D VKLWD +G+ + HK V ++++ N + +
Sbjct: 147 TQAVRCLRFSPDGKWLASASDDHSVKLWDLTAGKMMAELSEHKGPVNIIEFHPNEYLLAS 206
Query: 258 ASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFHW 310
S D+ ++ +D+ + + G V A+ + F G ++ W
Sbjct: 207 GSADRTVRFWDLEKFQLIGCTEGETIPVRAILFSSDGGCIFCGGRDALRVYGW 259
Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 48/117 (41%), Gaps = 2/117 (1%)
Query: 249 NQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIF 308
+G V T D + L+ + + S GH V ++ ++ EE V+GS GS+
Sbjct: 30 KSSGRLVATGGDDCRVNLWSVNKPNCIMSLTGHTTPVESVRFNN-AEELIVAGSQSGSLR 88
Query: 309 HWLVGHETPQVEIHNVHDNTVWDLAWHPIGYLLCSGSNDHTTKFWCRNRPGDTARDK 365
W + + H V L +HP G + SGS D K W R G R K
Sbjct: 89 VWDL-EAAKILRTLMGHKANVCSLDFHPYGDFVASGSLDTNIKLWDVRRKGCVFRYK 144
>sp|Q23256|YH92_CAEEL Uncharacterized WD repeat-containing protein ZC302.2
OS=Caenorhabditis elegans GN=ZC302.2 PE=4 SV=1
Length = 501
Score = 106 bits (265), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 126/290 (43%), Gaps = 10/290 (3%)
Query: 74 SINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGD 133
S++ + ++ G+ L TGS + +WN + L +H I WS N ++ S
Sbjct: 215 SVSVIKFSYCGKYLGTGSADKQIKVWNTVDMTYLQTLASHQLGINDFSWSSNSQFIASAS 274
Query: 134 DGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERS 193
D +K + H V SF S D TV+VWDF +
Sbjct: 275 DDTTVKIFDVISGACLRTMRGHTNYVFCCSFNPQSSLIASAGFDETVRVWDFKTGLCVKC 334
Query: 194 LTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNM-VLCVKWNQNG 252
+ H + S+ ++ + + + D +++WDA SG L + + V V ++ NG
Sbjct: 335 IPAHSDPITSISYNHDGNTMATSSYDGCIRVWDAASGSCLKTLVDTDHAPVTFVCFSPNG 394
Query: 253 NWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWH---PFHEEYFVSGSLDGSIFH 309
++L+A D +KL+D + K L+ + GH+ L + P ++ +SGS DG I
Sbjct: 395 KYLLSAQLDSSLKLWDPKKAKPLKYYNGHKNKKYCLFANMSVPL-GKHIISGSEDGRILV 453
Query: 310 WLVGHETPQ-VEIHNVHDNTVWDLAWHPIGYLLCSG--SNDHTTKFWCRN 356
W + +T Q V+I H V HP ++ SG D+ + W RN
Sbjct: 454 WSI--QTKQIVQILEGHTTPVLATDSHPTLNIIASGGLEPDNVIRIWRRN 501
Score = 102 bits (254), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 120/258 (46%), Gaps = 7/258 (2%)
Query: 100 NGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESV 159
NG+ F+ + H ++ + +S+ ++ +G IK W ++H+ +
Sbjct: 200 NGE-FSLVKTISGHTKSVSVIKFSYCGKYLGTGSADKQIKVWNTVDMTYLQTLASHQLGI 258
Query: 160 RDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKD 219
D S+ S SDDTTVK++D R++ GH V ++P SL+ S G D
Sbjct: 259 NDFSWSSNSQFIASASDDTTVKIFDVISGACLRTMRGHTNYVFCCSFNPQSSLIASAGFD 318
Query: 220 SLVKLWDAKSGRELCSFHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESF- 278
V++WD K+G + H + + + +N +GN + T+S D I+++D + L++
Sbjct: 319 ETVRVWDFKTGLCVKCIPAHSDPITSISYNHDGNTMATSSYDGCIRVWDAASGSCLKTLV 378
Query: 279 RGHRKDVTALAWHPFHEEYFVSGSLDGSIFHWLVGHETPQVEIHNVHDNTVWDLAWH--- 335
VT + + P + +Y +S LD S+ W P ++ +N H N + L +
Sbjct: 379 DTDHAPVTFVCFSP-NGKYLLSAQLDSSLKLWDPKKAKP-LKYYNGHKNKKYCLFANMSV 436
Query: 336 PIGYLLCSGSNDHTTKFW 353
P+G + SGS D W
Sbjct: 437 PLGKHIISGSEDGRILVW 454
>sp|Q9PTR5|LIS1_CHICK Lissencephaly-1 homolog OS=Gallus gallus GN=PAFAH1B1 PE=2 SV=3
Length = 410
Score = 106 bits (265), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 117/245 (47%), Gaps = 22/245 (8%)
Query: 129 MVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARC 188
MVS + IK W + + H +SV+D+SF T SCS D T+K+WDF
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGF 182
Query: 189 QEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKW 248
+ R++ GH +V SV P +VS +D +K+W+ ++G + +F GH+ V V+
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRP 242
Query: 249 NQNGNWVLTASKDQIIKLYDIRAMKELES-FRGHRKDVTALAWHPFHEE----------- 296
NQ+G + + S DQ ++++ + A KE ++ R H V ++W P
Sbjct: 243 NQDGTLIASCSNDQTVRVW-VVATKECKAELREHEHVVECISWAPESSYSTISEATGSET 301
Query: 297 --------YFVSGSLDGSIFHWLVGHETPQVEIHNVHDNTVWDLAWHPIGYLLCSGSNDH 348
+ +SGS D +I W + + + HDN V + +H G + S ++D
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVG-HDNWVRGVLFHSGGKFILSCADDK 360
Query: 349 TTKFW 353
T + W
Sbjct: 361 TLRVW 365
Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 117/257 (45%), Gaps = 21/257 (8%)
Query: 74 SINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGD 133
S+ + + TG+ L + S LW+ Q F + HDH + S+ N + +VS
Sbjct: 152 SVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAS 211
Query: 134 DGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERS 193
IK W+ + H+E VR + + SCS+D TV+VW A + +
Sbjct: 212 RDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAE 271
Query: 194 LTGHGWDVKSVDWHPTKS--------------------LLVSGGKDSLVKLWDAKSGREL 233
L H V+ + W P S L+SG +D +K+WD +G L
Sbjct: 272 LREHEHVVECISWAPESSYSTISEATGSETKKSGKPGPFLLSGSRDKTIKMWDISTGMCL 331
Query: 234 CSFHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPF 293
+ GH N V V ++ G ++L+ + D+ ++++D + + +++ H VT+L +H
Sbjct: 332 MTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDFKNKRCMKTLNAHEHFVTSLDFHK- 390
Query: 294 HEEYFVSGSLDGSIFHW 310
Y V+GS+D ++ W
Sbjct: 391 TAPYVVTGSVDQTVKVW 407
Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 86/164 (52%), Gaps = 2/164 (1%)
Query: 190 EERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWN 249
E+ +L+GH V V +HP S++VS +D+ +K+WD ++G + GH + V + ++
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD 159
Query: 250 QNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFH 309
G + + S D IKL+D + + + + GH +V+++A P + ++ VS S D +I
Sbjct: 160 HTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP-NGDHIVSASRDKTIKM 218
Query: 310 WLVGHETPQVEIHNVHDNTVWDLAWHPIGYLLCSGSNDHTTKFW 353
W V V+ H V + + G L+ S SND T + W
Sbjct: 219 WEV-QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/217 (20%), Positives = 93/217 (42%), Gaps = 20/217 (9%)
Query: 74 SINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGD 133
+++ V P G +++ S+ +W Q+ H +R + + + + S
Sbjct: 194 NVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCS 253
Query: 134 DGGAIKYWQNNMNNVKANKSAHKESVRDLSFC------------RTDLK--------FCS 173
+ ++ W KA H+ V +S+ ++ K S
Sbjct: 254 NDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISEATGSETKKSGKPGPFLLS 313
Query: 174 CSDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGREL 233
S D T+K+WD + +L GH V+ V +H ++S D +++WD K+ R +
Sbjct: 314 GSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDFKNKRCM 373
Query: 234 CSFHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIR 270
+ + H++ V + +++ +V+T S DQ +K+++ R
Sbjct: 374 KTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>sp|Q8YV57|Y2124_NOSS1 Uncharacterized WD repeat-containing protein all2124 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=all2124 PE=4 SV=1
Length = 1683
Score = 106 bits (265), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 130/272 (47%), Gaps = 4/272 (1%)
Query: 84 GRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGDDGGAIKYWQN 143
G+ + +GS LW+ F L H+ A+ S+ +S + + SG IK WQ
Sbjct: 1084 GQTIASGSLDKTIKLWSRDGRLFRT-LNGHEDAVYSVSFSPDGQTIASGGSDKTIKLWQT 1142
Query: 144 NMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERSLTGHGWDVKS 203
+ + + H+++V ++ F S S D ++K+WD Q +LTGH V +
Sbjct: 1143 SDGTLLKTITGHEQTVNNVYFSPDGKNLASASSDHSIKLWDTTSGQLLMTLTGHSAGVIT 1202
Query: 204 VDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQNGNWVLTASKDQI 263
V + P + +G +D VKLW + G+ L + +GH++ V + ++ +G + +AS D+
Sbjct: 1203 VRFSPDGQTIAAGSEDKTVKLWHRQDGKLLKTLNGHQDWVNSLSFSPDGKTLASASADKT 1262
Query: 264 IKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFHWLVGHETPQVEIHN 323
IKL+ I K +++ +GH V + + + S S D +I W ++E
Sbjct: 1263 IKLWRIADGKLVKTLKGHNDSVWDVNFSS-DGKAIASASRDNTIKLW--NRHGIELETFT 1319
Query: 324 VHDNTVWDLAWHPIGYLLCSGSNDHTTKFWCR 355
H V+ + + P ++ S S D+T + W R
Sbjct: 1320 GHSGGVYAVNFLPDSNIIASASLDNTIRLWQR 1351
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 135/285 (47%), Gaps = 15/285 (5%)
Query: 75 INRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEM----ILQAHDHAIRSMVWSHNDNWMV 130
+N V+ P +L T + TL Q FEM L+ H + S+ S + +
Sbjct: 1037 VNHVIAVPNNLKLATVT-----TL---QQALFEMQERNRLEGHKDGVISISISRDGQTIA 1088
Query: 131 SGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQE 190
SG IK W + + + H+++V +SF S D T+K+W +
Sbjct: 1089 SGSLDKTIKLWSRD-GRLFRTLNGHEDAVYSVSFSPDGQTIASGGSDKTIKLWQTSDGTL 1147
Query: 191 ERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQ 250
+++TGH V +V + P L S D +KLWD SG+ L + GH V+ V+++
Sbjct: 1148 LKTITGHEQTVNNVYFSPDGKNLASASSDHSIKLWDTTSGQLLMTLTGHSAGVITVRFSP 1207
Query: 251 NGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFHW 310
+G + S+D+ +KL+ + K L++ GH+ V +L++ P + S S D +I W
Sbjct: 1208 DGQTIAAGSEDKTVKLWHRQDGKLLKTLNGHQDWVNSLSFSP-DGKTLASASADKTIKLW 1266
Query: 311 LVGHETPQVEIHNVHDNTVWDLAWHPIGYLLCSGSNDHTTKFWCR 355
+ + V+ H+++VWD+ + G + S S D+T K W R
Sbjct: 1267 RIA-DGKLVKTLKGHNDSVWDVNFSSDGKAIASASRDNTIKLWNR 1310
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 135/336 (40%), Gaps = 42/336 (12%)
Query: 67 SLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHND 126
+LN + ++ V ++P G+ + +G LW + H+ + ++ +S +
Sbjct: 1108 TLNGHEDAVYSVSFSPDGQTIASGGSDKTIKLWQTSDGTLLKTITGHEQTVNNVYFSPDG 1167
Query: 127 NWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFA 186
+ S +IK W + + H V + F + S+D TVK+W
Sbjct: 1168 KNLASASSDHSIKLWDTTSGQLLMTLTGHSAGVITVRFSPDGQTIAAGSEDKTVKLWHRQ 1227
Query: 187 RCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCV 246
+ ++L GH V S+ + P L S D +KLW G+ + + GH + V V
Sbjct: 1228 DGKLLKTLNGHQDWVNSLSFSPDGKTLASASADKTIKLWRIADGKLVKTLKGHNDSVWDV 1287
Query: 247 KWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGS 306
++ +G + +AS+D IKL++ R ELE+F GH V A+ + P S SLD +
Sbjct: 1288 NFSSDGKAIASASRDNTIKLWN-RHGIELETFTGHSGGVYAVNFLP-DSNIIASASLDNT 1345
Query: 307 IFHW---------LVGHETPQVEIHNVHDNTVWDLA--------WH-------------- 335
I W ++ + + +HD ++ A WH
Sbjct: 1346 IRLWQRPLISPLEVLAGNSGVYAVSFLHDGSIIATAGADGNIQLWHSQDGSLLKTLPGNK 1405
Query: 336 --------PIGYLLCSGSNDHTTKFWCRNRPGDTAR 363
P G L+ S + D T K W R R G +
Sbjct: 1406 AIYGISFTPQGDLIASANADKTVKIW-RVRDGKALK 1440
Score = 93.2 bits (230), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 120/274 (43%), Gaps = 12/274 (4%)
Query: 84 GRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGDDGGAIKYWQN 143
G + T G LW+ Q + L + AI + ++ + + S + +K W+
Sbjct: 1375 GSIIATAGADGNIQLWHSQDGSLLKTLPG-NKAIYGISFTPQGDLIASANADKTVKIWRV 1433
Query: 144 NMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERSLTGHGWDVKS 203
H V ++F S S D TVK+W+ + + +++L GH +V
Sbjct: 1434 RDGKALKTLIGHDNEVNKVNFSPDGKTLASASRDNTVKLWNVSDGKFKKTLKGHTDEVFW 1493
Query: 204 VDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQNGNWVLTASKDQI 263
V + P ++ S D ++LWD+ SG + S H ++V V +N +G+ + + S D+
Sbjct: 1494 VSFSPDGKIIASASADKTIRLWDSFSGNLIKSLPAHNDLVYSVNFNPDGSMLASTSADKT 1553
Query: 264 IKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFHWLV-GH---ETPQV 319
+KL+ L +F GH V + ++ P Y S S D ++ W + GH PQ
Sbjct: 1554 VKLWRSHDGHLLHTFSGHSNVVYSSSFSP-DGRYIASASEDKTVKIWQIDGHLLTTLPQ- 1611
Query: 320 EIHNVHDNTVWDLAWHPIGYLLCSGSNDHTTKFW 353
H V + P G L SGS D TTK W
Sbjct: 1612 -----HQAGVMSAIFSPDGKTLISGSLDTTTKIW 1640
Score = 86.3 bits (212), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 114/242 (47%), Gaps = 3/242 (1%)
Query: 112 AHDHAIRSMVWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKF 171
A + + ++ + H+ + + + G I+ W + ++ +K ++ +SF
Sbjct: 1361 AGNSGVYAVSFLHDGSIIATAGADGNIQLWHSQDGSLLKTLPGNK-AIYGISFTPQGDLI 1419
Query: 172 CSCSDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGR 231
S + D TVK+W + ++L GH +V V++ P L S +D+ VKLW+ G+
Sbjct: 1420 ASANADKTVKIWRVRDGKALKTLIGHDNEVNKVNFSPDGKTLASASRDNTVKLWNVSDGK 1479
Query: 232 ELCSFHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWH 291
+ GH + V V ++ +G + +AS D+ I+L+D + ++S H V ++ ++
Sbjct: 1480 FKKTLKGHTDEVFWVSFSPDGKIIASASADKTIRLWDSFSGNLIKSLPAHNDLVYSVNFN 1539
Query: 292 PFHEEYFVSGSLDGSIFHWLVGHETPQVEIHNVHDNTVWDLAWHPIGYLLCSGSNDHTTK 351
P S S D ++ W H+ + + H N V+ ++ P G + S S D T K
Sbjct: 1540 P-DGSMLASTSADKTVKLWR-SHDGHLLHTFSGHSNVVYSSSFSPDGRYIASASEDKTVK 1597
Query: 352 FW 353
W
Sbjct: 1598 IW 1599
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 108/237 (45%), Gaps = 2/237 (0%)
Query: 74 SINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGD 133
+I + +TP G + + + +W + L HD+ + + +S + + S
Sbjct: 1406 AIYGISFTPQGDLIASANADKTVKIWRVRDGKALKTLIGHDNEVNKVNFSPDGKTLASAS 1465
Query: 134 DGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERS 193
+K W + K H + V +SF S S D T+++WD +S
Sbjct: 1466 RDNTVKLWNVSDGKFKKTLKGHTDEVFWVSFSPDGKIIASASADKTIRLWDSFSGNLIKS 1525
Query: 194 LTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQNGN 253
L H V SV+++P S+L S D VKLW + G L +F GH N+V ++ +G
Sbjct: 1526 LPAHNDLVYSVNFNPDGSMLASTSADKTVKLWRSHDGHLLHTFSGHSNVVYSSSFSPDGR 1585
Query: 254 WVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFHW 310
++ +AS+D+ +K++ I L + H+ V + + P + +SGSLD + W
Sbjct: 1586 YIASASEDKTVKIWQIDG-HLLTTLPQHQAGVMSAIFSP-DGKTLISGSLDTTTKIW 1640
Score = 33.9 bits (76), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 45/119 (37%), Gaps = 1/119 (0%)
Query: 75 INRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGDD 134
+ V + P G L + S LW + H + + S +S + ++ S +
Sbjct: 1533 VYSVNFNPDGSMLASTSADKTVKLWRSHDGHLLHTFSGHSNVVYSSSFSPDGRYIASASE 1592
Query: 135 GGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERS 193
+K WQ + ++ H+ V F S S DTT K+W F Q + S
Sbjct: 1593 DKTVKIWQID-GHLLTTLPQHQAGVMSAIFSPDGKTLISGSLDTTTKIWRFDSQQAKTS 1650
>sp|Q8HXX0|LIS1_MACFA Platelet-activating factor acetylhydrolase IB subunit alpha
OS=Macaca fascicularis GN=PAFAH1B1 PE=2 SV=3
Length = 410
Score = 106 bits (265), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 117/245 (47%), Gaps = 22/245 (8%)
Query: 129 MVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARC 188
MVS + IK W + + H +SV+D+SF + SCS D T+K+WDF
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLTSCSADMTIKLWDFQGF 182
Query: 189 QEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKW 248
+ R++ GH +V SV P LVS +D +K+W+ ++G + +F GH+ V V+
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHLVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRP 242
Query: 249 NQNGNWVLTASKDQIIKLYDIRAMKELES-FRGHRKDVTALAWHPFHEE----------- 296
NQ+G + + S DQ ++++ + A KE ++ R H V ++W P
Sbjct: 243 NQDGTLIASCSNDQTVRVW-VVATKECKAELREHEHVVECISWAPESSYSSISEATGSET 301
Query: 297 --------YFVSGSLDGSIFHWLVGHETPQVEIHNVHDNTVWDLAWHPIGYLLCSGSNDH 348
+ +SGS D +I W V + + HDN V + +H G + S ++D
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVG-HDNWVRGVLFHSGGKFILSCADDK 360
Query: 349 TTKFW 353
T + W
Sbjct: 361 TLRVW 365
Score = 99.8 bits (247), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 117/257 (45%), Gaps = 21/257 (8%)
Query: 74 SINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGD 133
S+ + + +G+ L + S LW+ Q F + HDH + S+ N + +VS
Sbjct: 152 SVQDISFDHSGKLLTSCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHLVSAS 211
Query: 134 DGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERS 193
IK W+ + H+E VR + + SCS+D TV+VW A + +
Sbjct: 212 RDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAE 271
Query: 194 LTGHGWDVKSVDWHPTKS--------------------LLVSGGKDSLVKLWDAKSGREL 233
L H V+ + W P S L+SG +D +K+WD +G L
Sbjct: 272 LREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCL 331
Query: 234 CSFHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPF 293
+ GH N V V ++ G ++L+ + D+ ++++D + + +++ H VT+L +H
Sbjct: 332 MTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHK- 390
Query: 294 HEEYFVSGSLDGSIFHW 310
Y V+GS+D ++ W
Sbjct: 391 TAPYVVTGSVDQTVKVW 407
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 87/164 (53%), Gaps = 2/164 (1%)
Query: 190 EERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWN 249
E+ +L+GH V V +HP S++VS +D+ +K+WD ++G + GH + V + ++
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD 159
Query: 250 QNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFH 309
+G + + S D IKL+D + + + + GH +V+++A P + ++ VS S D +I
Sbjct: 160 HSGKLLTSCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP-NGDHLVSASRDKTIKM 218
Query: 310 WLVGHETPQVEIHNVHDNTVWDLAWHPIGYLLCSGSNDHTTKFW 353
W V V+ H V + + G L+ S SND T + W
Sbjct: 219 WEV-QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 92/216 (42%), Gaps = 20/216 (9%)
Query: 75 INRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGDD 134
++ V P G L++ S+ +W Q+ H +R + + + + S +
Sbjct: 195 VSSVAIMPNGDHLVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSN 254
Query: 135 GGAIKYWQNNMNNVKANKSAHKESVRDLSFC------------RTDLK--------FCSC 174
++ W KA H+ V +S+ ++ K S
Sbjct: 255 DQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG 314
Query: 175 SDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELC 234
S D T+K+WD + +L GH V+ V +H ++S D +++WD K+ R +
Sbjct: 315 SRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMK 374
Query: 235 SFHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIR 270
+ + H++ V + +++ +V+T S DQ +K+++ R
Sbjct: 375 TLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>sp|Q9GL51|LIS1_PIG Platelet-activating factor acetylhydrolase IB subunit alpha OS=Sus
scrofa GN=PAFAH1B1 PE=2 SV=3
Length = 410
Score = 106 bits (264), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 117/245 (47%), Gaps = 22/245 (8%)
Query: 129 MVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARC 188
MVS + IK W + + H +SV+D+SF + SCS D T+K+WDF
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF 182
Query: 189 QEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKW 248
+ R++ GH +V SV P +VS +D +K+W+ ++G + +F GH+ V V+
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRP 242
Query: 249 NQNGNWVLTASKDQIIKLYDIRAMKELES-FRGHRKDVTALAWHPFHEE----------- 296
NQ+G + + S DQ ++++ + A KE ++ R H V ++W P
Sbjct: 243 NQDGTLIASCSNDQTVRVW-VVATKECKAELREHEHVVECISWAPESSYSSISEATGSET 301
Query: 297 --------YFVSGSLDGSIFHWLVGHETPQVEIHNVHDNTVWDLAWHPIGYLLCSGSNDH 348
+ +SGS D +I W V + + HDN V + +H G + S ++D
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVG-HDNWVRGVLFHSGGKFILSCADDK 360
Query: 349 TTKFW 353
T + W
Sbjct: 361 TLRVW 365
Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 117/257 (45%), Gaps = 21/257 (8%)
Query: 74 SINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGD 133
S+ + + +G+ L + S LW+ Q F + HDH + S+ N + +VS
Sbjct: 152 SVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAA 211
Query: 134 DGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERS 193
IK W+ + H+E VR + + SCS+D TV+VW A + +
Sbjct: 212 RDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAE 271
Query: 194 LTGHGWDVKSVDWHPTKS--------------------LLVSGGKDSLVKLWDAKSGREL 233
L H V+ + W P S L+SG +D +K+WD +G L
Sbjct: 272 LREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCL 331
Query: 234 CSFHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPF 293
+ GH N V V ++ G ++L+ + D+ ++++D + + +++ H VT+L +H
Sbjct: 332 MTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHK- 390
Query: 294 HEEYFVSGSLDGSIFHW 310
Y V+GS+D ++ W
Sbjct: 391 TAPYVVTGSVDQTVKVW 407
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 87/164 (53%), Gaps = 2/164 (1%)
Query: 190 EERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWN 249
E+ +L+GH V V +HP S++VS +D+ +K+WD ++G + GH + V + ++
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD 159
Query: 250 QNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFH 309
+G + + S D IKL+D + + + + GH +V+++A P + ++ VS + D +I
Sbjct: 160 HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP-NGDHIVSAARDKTIKM 218
Query: 310 WLVGHETPQVEIHNVHDNTVWDLAWHPIGYLLCSGSNDHTTKFW 353
W V V+ H V + + G L+ S SND T + W
Sbjct: 219 WEV-QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 57.4 bits (137), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/216 (19%), Positives = 92/216 (42%), Gaps = 20/216 (9%)
Query: 75 INRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGDD 134
++ V P G +++ ++ +W Q+ H +R + + + + S +
Sbjct: 195 VSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSN 254
Query: 135 GGAIKYWQNNMNNVKANKSAHKESVRDLSFC------------RTDLK--------FCSC 174
++ W KA H+ V +S+ ++ K S
Sbjct: 255 DQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG 314
Query: 175 SDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELC 234
S D T+K+WD + +L GH V+ V +H ++S D +++WD K+ R +
Sbjct: 315 SRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMK 374
Query: 235 SFHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIR 270
+ + H++ V + +++ +V+T S DQ +K+++ R
Sbjct: 375 TLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>sp|P63004|LIS1_RAT Platelet-activating factor acetylhydrolase IB subunit alpha
OS=Rattus norvegicus GN=Pafah1b1 PE=1 SV=2
Length = 410
Score = 105 bits (263), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 117/245 (47%), Gaps = 22/245 (8%)
Query: 129 MVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARC 188
MVS + IK W + + H +SV+D+SF + SCS D T+K+WDF
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF 182
Query: 189 QEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKW 248
+ R++ GH +V SV P +VS +D +K+W+ ++G + +F GH+ V V+
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRP 242
Query: 249 NQNGNWVLTASKDQIIKLYDIRAMKELES-FRGHRKDVTALAWHPFHEE----------- 296
NQ+G + + S DQ ++++ + A KE ++ R H V ++W P
Sbjct: 243 NQDGTLIASCSNDQTVRVW-VVATKECKAELREHEHVVECISWAPESSYSSISEATGSET 301
Query: 297 --------YFVSGSLDGSIFHWLVGHETPQVEIHNVHDNTVWDLAWHPIGYLLCSGSNDH 348
+ +SGS D +I W V + + HDN V + +H G + S ++D
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVG-HDNWVRGVLFHSGGKFILSCADDK 360
Query: 349 TTKFW 353
T + W
Sbjct: 361 TLRVW 365
Score = 99.4 bits (246), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 117/257 (45%), Gaps = 21/257 (8%)
Query: 74 SINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGD 133
S+ + + +G+ L + S LW+ Q F + HDH + S+ N + +VS
Sbjct: 152 SVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAS 211
Query: 134 DGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERS 193
IK W+ + H+E VR + + SCS+D TV+VW A + +
Sbjct: 212 RDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAE 271
Query: 194 LTGHGWDVKSVDWHPTKS--------------------LLVSGGKDSLVKLWDAKSGREL 233
L H V+ + W P S L+SG +D +K+WD +G L
Sbjct: 272 LREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCL 331
Query: 234 CSFHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPF 293
+ GH N V V ++ G ++L+ + D+ ++++D + + +++ H VT+L +H
Sbjct: 332 MTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHK- 390
Query: 294 HEEYFVSGSLDGSIFHW 310
Y V+GS+D ++ W
Sbjct: 391 TAPYVVTGSVDQTVKVW 407
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 87/164 (53%), Gaps = 2/164 (1%)
Query: 190 EERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWN 249
E+ +L+GH V V +HP S++VS +D+ +K+WD ++G + GH + V + ++
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD 159
Query: 250 QNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFH 309
+G + + S D IKL+D + + + + GH +V+++A P + ++ VS S D +I
Sbjct: 160 HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP-NGDHIVSASRDKTIKM 218
Query: 310 WLVGHETPQVEIHNVHDNTVWDLAWHPIGYLLCSGSNDHTTKFW 353
W V V+ H V + + G L+ S SND T + W
Sbjct: 219 WEV-QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 92/216 (42%), Gaps = 20/216 (9%)
Query: 75 INRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGDD 134
++ V P G +++ S+ +W Q+ H +R + + + + S +
Sbjct: 195 VSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSN 254
Query: 135 GGAIKYWQNNMNNVKANKSAHKESVRDLSFC------------RTDLK--------FCSC 174
++ W KA H+ V +S+ ++ K S
Sbjct: 255 DQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG 314
Query: 175 SDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELC 234
S D T+K+WD + +L GH V+ V +H ++S D +++WD K+ R +
Sbjct: 315 SRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMK 374
Query: 235 SFHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIR 270
+ + H++ V + +++ +V+T S DQ +K+++ R
Sbjct: 375 TLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>sp|P63005|LIS1_MOUSE Platelet-activating factor acetylhydrolase IB subunit alpha OS=Mus
musculus GN=Pafah1b1 PE=1 SV=2
Length = 410
Score = 105 bits (263), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 117/245 (47%), Gaps = 22/245 (8%)
Query: 129 MVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARC 188
MVS + IK W + + H +SV+D+SF + SCS D T+K+WDF
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF 182
Query: 189 QEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKW 248
+ R++ GH +V SV P +VS +D +K+W+ ++G + +F GH+ V V+
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRP 242
Query: 249 NQNGNWVLTASKDQIIKLYDIRAMKELES-FRGHRKDVTALAWHPFHEE----------- 296
NQ+G + + S DQ ++++ + A KE ++ R H V ++W P
Sbjct: 243 NQDGTLIASCSNDQTVRVW-VVATKECKAELREHEHVVECISWAPESSYSSISEATGSET 301
Query: 297 --------YFVSGSLDGSIFHWLVGHETPQVEIHNVHDNTVWDLAWHPIGYLLCSGSNDH 348
+ +SGS D +I W V + + HDN V + +H G + S ++D
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVG-HDNWVRGVLFHSGGKFILSCADDK 360
Query: 349 TTKFW 353
T + W
Sbjct: 361 TLRVW 365
Score = 99.4 bits (246), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 117/257 (45%), Gaps = 21/257 (8%)
Query: 74 SINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGD 133
S+ + + +G+ L + S LW+ Q F + HDH + S+ N + +VS
Sbjct: 152 SVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAS 211
Query: 134 DGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERS 193
IK W+ + H+E VR + + SCS+D TV+VW A + +
Sbjct: 212 RDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAE 271
Query: 194 LTGHGWDVKSVDWHPTKS--------------------LLVSGGKDSLVKLWDAKSGREL 233
L H V+ + W P S L+SG +D +K+WD +G L
Sbjct: 272 LREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCL 331
Query: 234 CSFHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPF 293
+ GH N V V ++ G ++L+ + D+ ++++D + + +++ H VT+L +H
Sbjct: 332 MTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHK- 390
Query: 294 HEEYFVSGSLDGSIFHW 310
Y V+GS+D ++ W
Sbjct: 391 TAPYVVTGSVDQTVKVW 407
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 87/164 (53%), Gaps = 2/164 (1%)
Query: 190 EERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWN 249
E+ +L+GH V V +HP S++VS +D+ +K+WD ++G + GH + V + ++
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD 159
Query: 250 QNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFH 309
+G + + S D IKL+D + + + + GH +V+++A P + ++ VS S D +I
Sbjct: 160 HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP-NGDHIVSASRDKTIKM 218
Query: 310 WLVGHETPQVEIHNVHDNTVWDLAWHPIGYLLCSGSNDHTTKFW 353
W V V+ H V + + G L+ S SND T + W
Sbjct: 219 WEV-QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 92/216 (42%), Gaps = 20/216 (9%)
Query: 75 INRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGDD 134
++ V P G +++ S+ +W Q+ H +R + + + + S +
Sbjct: 195 VSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSN 254
Query: 135 GGAIKYWQNNMNNVKANKSAHKESVRDLSFC------------RTDLK--------FCSC 174
++ W KA H+ V +S+ ++ K S
Sbjct: 255 DQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG 314
Query: 175 SDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELC 234
S D T+K+WD + +L GH V+ V +H ++S D +++WD K+ R +
Sbjct: 315 SRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMK 374
Query: 235 SFHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIR 270
+ + H++ V + +++ +V+T S DQ +K+++ R
Sbjct: 375 TLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>sp|B0LSW3|LIS1_FELCA Platelet-activating factor acetylhydrolase IB subunit alpha
OS=Felis catus GN=PAFAH1B1 PE=2 SV=1
Length = 410
Score = 105 bits (263), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 117/245 (47%), Gaps = 22/245 (8%)
Query: 129 MVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARC 188
MVS + IK W + + H +SV+D+SF + SCS D T+K+WDF
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF 182
Query: 189 QEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKW 248
+ R++ GH +V SV P +VS +D +K+W+ ++G + +F GH+ V V+
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRP 242
Query: 249 NQNGNWVLTASKDQIIKLYDIRAMKELES-FRGHRKDVTALAWHPFHEE----------- 296
NQ+G + + S DQ ++++ + A KE ++ R H V ++W P
Sbjct: 243 NQDGTLIASCSNDQTVRVW-VVATKECKAELREHEHVVECISWAPESSYSSISEATGSET 301
Query: 297 --------YFVSGSLDGSIFHWLVGHETPQVEIHNVHDNTVWDLAWHPIGYLLCSGSNDH 348
+ +SGS D +I W V + + HDN V + +H G + S ++D
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVG-HDNWVRGVLFHSGGKFILSCADDK 360
Query: 349 TTKFW 353
T + W
Sbjct: 361 TLRVW 365
Score = 99.4 bits (246), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 117/257 (45%), Gaps = 21/257 (8%)
Query: 74 SINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGD 133
S+ + + +G+ L + S LW+ Q F + HDH + S+ N + +VS
Sbjct: 152 SVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAS 211
Query: 134 DGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERS 193
IK W+ + H+E VR + + SCS+D TV+VW A + +
Sbjct: 212 RDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAE 271
Query: 194 LTGHGWDVKSVDWHPTKS--------------------LLVSGGKDSLVKLWDAKSGREL 233
L H V+ + W P S L+SG +D +K+WD +G L
Sbjct: 272 LREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCL 331
Query: 234 CSFHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPF 293
+ GH N V V ++ G ++L+ + D+ ++++D + + +++ H VT+L +H
Sbjct: 332 MTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHK- 390
Query: 294 HEEYFVSGSLDGSIFHW 310
Y V+GS+D ++ W
Sbjct: 391 TAPYVVTGSVDQTVKVW 407
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 87/164 (53%), Gaps = 2/164 (1%)
Query: 190 EERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWN 249
E+ +L+GH V V +HP S++VS +D+ +K+WD ++G + GH + V + ++
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD 159
Query: 250 QNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFH 309
+G + + S D IKL+D + + + + GH +V+++A P + ++ VS S D +I
Sbjct: 160 HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP-NGDHIVSASRDKTIKM 218
Query: 310 WLVGHETPQVEIHNVHDNTVWDLAWHPIGYLLCSGSNDHTTKFW 353
W V V+ H V + + G L+ S SND T + W
Sbjct: 219 WEV-QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 92/216 (42%), Gaps = 20/216 (9%)
Query: 75 INRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGDD 134
++ V P G +++ S+ +W Q+ H +R + + + + S +
Sbjct: 195 VSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSN 254
Query: 135 GGAIKYWQNNMNNVKANKSAHKESVRDLSFC------------RTDLK--------FCSC 174
++ W KA H+ V +S+ ++ K S
Sbjct: 255 DQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG 314
Query: 175 SDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELC 234
S D T+K+WD + +L GH V+ V +H ++S D +++WD K+ R +
Sbjct: 315 SRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMK 374
Query: 235 SFHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIR 270
+ + H++ V + +++ +V+T S DQ +K+++ R
Sbjct: 375 TLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.133 0.439
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 292,356,459
Number of Sequences: 539616
Number of extensions: 14817490
Number of successful extensions: 120765
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1502
Number of HSP's successfully gapped in prelim test: 3532
Number of HSP's that attempted gapping in prelim test: 57642
Number of HSP's gapped (non-prelim): 30915
length of query: 643
length of database: 191,569,459
effective HSP length: 124
effective length of query: 519
effective length of database: 124,657,075
effective search space: 64697021925
effective search space used: 64697021925
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)