Query 006498
Match_columns 643
No_of_seqs 223 out of 1374
Neff 4.3
Searched_HMMs 29240
Date Tue Mar 26 18:19:12 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/006498.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_2126-2130//hhsearch_pdb/006498hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1o0s_A NAD-ME, NAD-dependent m 1.0 1 1 1581.2 43.0 544 98-643 33-578 (605)
2 1gq2_A Malic enzyme; oxidoredu 1.0 1 1 1578.2 45.4 540 102-643 1-541 (555)
3 1pj3_A NAD-dependent malic enz 1.0 1 1 1575.0 45.2 542 101-643 2-546 (564)
4 3nv9_A Malic enzyme; rossmann 1.0 1 1 918.1 29.9 383 180-634 55-449 (487)
5 2a9f_A Putative malic enzyme ( 1.0 1 1 841.8 19.8 361 174-615 24-391 (398)
6 1vl6_A Malate oxidoreductase; 1.0 1 1 798.3 23.8 354 173-611 27-388 (388)
7 2dvm_A Malic enzyme, 439AA lon 1.0 1 1 655.2 25.6 382 176-639 24-420 (439)
8 3h9u_A Adenosylhomocysteinase; 1.0 1 1 77.8 15.7 131 350-514 171-312 (436)
9 3gvp_A Adenosylhomocysteinase 1.0 1 1 77.0 14.8 169 305-512 112-319 (435)
10 1x13_A NAD(P) transhydrogenase 1.0 1 1 65.8 5.2 219 218-501 26-295 (401)
No 1
>1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, MAla dehydrogenase; HET: NAI; 2.00A {Ascaris suum} SCOP: c.2.1.7 c.58.1.3 PDB: 1llq_A*
Probab=1.00 E-value=1 Score=1581.17 Aligned_cols=544 Identities=47% Similarity=0.847 Sum_probs=534.8
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 33433321101276776688999888710145788997303799999999999741799446899989999862999999
Q 006498 98 SVSVASGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYK 177 (643)
Q Consensus 98 ~~~~~~G~~lL~~p~~NKGtAFt~~ER~~l~L~GLLPp~v~t~e~Q~~R~~~~~~~~~~~l~Ky~~L~~L~~rNe~LFY~ 177 (643)
..+..+|+++|++|++|||||||.+||++|||+|||||+|+|+|+|++|+|.++++++++|+||+||++||++||+||||
T Consensus 33 ~~~~~~G~~lL~~p~~NKGtAFt~~ER~~l~L~GLLPp~v~t~e~Q~~r~~~~~~~~~~~l~k~~~L~~L~~~Ne~Lfyr 112 (605)
T 1o0s_A 33 VTPKKRSAELLKEPRLNKGMGFSLYERQYLGLHGLLPPAFMTQEQQAYRVITKLREQPNDLARYIQLDGLQDRNEKLFYR 112 (605)
T ss_dssp CCCSCCHHHHHTCTTTCCGGGSCHHHHHHTTCTTTSCSCCCCHHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHCHHHHHH
T ss_pred CCCCCCHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHH
T ss_conf 64676607772797545778989999987799737899847999999999999871798489999999862511023035
Q ss_pred HHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC--CHHHHHHHCCCCCCEEEEEEECCCEEECCCCCCCCC
Q ss_conf 962160134873026205999998754413999541045791--129999844999980299995084000378888765
Q 006498 178 LLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDK--GKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHG 255 (643)
Q Consensus 178 ll~~~~ee~lPivYTPtVg~ac~~~s~i~r~p~Glyis~~d~--g~i~~il~nwp~~~v~viVVTDG~rILGLGDlG~~G 255 (643)
|+++|++|+|||+||||||++|++||+|||+|+|+|||++|+ |+++++++|||.++|++||||||||||||||||++|
T Consensus 113 ll~~~~~e~lpivYTPtVg~ac~~~s~i~r~p~g~yis~~d~~~~~i~~~l~n~~~~~~~v~VVTDG~~ILGLGD~G~~g 192 (605)
T 1o0s_A 113 VVCDHVKELMPIVYTPTVGLACQNFGYIYRKPKGLYITINDNSVSKIYQILSNWHEEDVRAIVVTDGERILGLGDLGAYG 192 (605)
T ss_dssp HHHHTHHHHHHHHSTTHHHHHHHHHCSCCCCCCSEEEEGGGCSHHHHHHHHTTSSCSCCCEEEEECSSCBTTTBCCGGGG
T ss_pred HHHHCHHHHCCEEECCCHHHHHHHHHHHHCCHHHHHCCCCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCEECCCCCCCC
T ss_conf 56548897278352764799999999875186752004557660469999860877782699997551200367778776
Q ss_pred CCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEC
Q ss_conf 44430346667661699999521222037899501447933214456677626668999999999998609972001203
Q 006498 256 MGIPVGKLSLYTALGGIRPSACLPVTIDVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGERILIQFED 335 (643)
Q Consensus 256 mgI~iGKl~LYta~gGI~P~~~LPI~LDvGTnNe~LL~DplYlGlr~~R~~geeY~~fidEfv~Av~~~fGp~~lIqfED 335 (643)
|||||||++|||+||||||++|||||||+|||||+||+||+||||||+|++|++||+|+||||+||+++|||+++|||||
T Consensus 193 ~~ipvGKl~Ly~~~aGIdP~~~lPI~LDvGTnne~LL~DPlYlG~r~~Rv~g~~Yd~fvdefv~av~~~fGp~~~I~~ED 272 (605)
T 1o0s_A 193 IGIPVGKLALYVALGGVQPKWCLPVLLDVGTNNMDLLNDPFYIGLRHKRVRGKDYDTLLDNFMKACTKKYGQKTLIQFED 272 (605)
T ss_dssp GHHHHHHHHHHHHHHCCCGGGEEEEEEESCCCCHHHHHCTTCCSCSSCCCCSHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred CCCEEEHHHHHHHCCCCCHHHEEEEEECCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEHHH
T ss_conf 76220089887760588841152058525777065436976457577888757899999999999998719872765766
Q ss_pred CCCCCHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCHH
Q ss_conf 99871899999872798603057750579999999999998399987864998273658999999999999983599965
Q 006498 336 FANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLE 415 (643)
Q Consensus 336 f~~~~Af~lL~rYr~~~~~FNDDIQGTaaV~LAgllaAlk~~g~~L~d~riv~~GAGsAgiGIA~li~~~~~~~~G~s~e 415 (643)
|+++|||++|+|||+++|||||||||||+|+||||+||+|++|++|+||||||+|||+||+|||+||+.+|++ .|++++
T Consensus 273 f~~p~af~il~ryr~~ipvFnDDiqGTA~V~lAgllnAlki~gk~l~d~riv~~GAGaAgigia~ll~~~m~~-~Gl~~e 351 (605)
T 1o0s_A 273 FANPNAFRLLDKYQDKYTMFNDDIQGTASVIVAGLLTCTRVTKKLVSQEKYLFFGAGAASTGIAEMIVHQMQN-EGISKE 351 (605)
T ss_dssp CCHHHHHHHHHHHTTTSEEEEHHHHHHHHHHHHHHHHHHHHHCCCGGGCCEEEECCSHHHHHHHHHHHHHHHT-TTCCHH
T ss_pred CCCCCHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHHHCCCHHHCEEEEECCCHHHHHHHHHHHHHHHH-CCCCHH
T ss_conf 3882179999986327876576666388999999999999808986455899978887899999999999987-599856
Q ss_pred HHCCEEEEEECCCCCCCCCCCCCCHHCHHHCCCCCCCCCHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHCCCCCCEEE
Q ss_conf 41280999907896458974488422111012148988899998305996999735899997999999998079994798
Q 006498 416 ETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIF 495 (643)
Q Consensus 416 eAr~~i~lvDs~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~evV~~vkPtvLIG~S~~~g~Fteevi~~Ma~~~erPIIF 495 (643)
||+++||+||++|||+++|. +|+++|++||++.++.++|+|+|+.||||||||+|+++|+||+|+|++|+++|+|||||
T Consensus 352 eA~~~i~~vD~~Gli~~~r~-~l~~~k~~~A~~~~~~~~L~eav~~vkpdVlIG~S~~~g~ft~evv~~Ma~~~~~PIIF 430 (605)
T 1o0s_A 352 EACNRIYLMDIDGLVTKNRK-EMNPRHVQFAKDMPETTSILEVIRAARPGALIGASTVRGAFNEEVIRAMAEINERPIIF 430 (605)
T ss_dssp HHHHTEEEEETTEECBTTCS-SCCGGGTTTCBSSCCCCCHHHHHHHHCCSEEEECSSCTTCSCHHHHHHHHHHCSSCEEE
T ss_pred HHHCEEEEEECCCCEECCCC-CCHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCEEE
T ss_conf 64080999979980328998-86499999986447779899998523998899936888988999999997248997798
Q ss_pred ECCCCCCCCCCCHHHHHCCCCCCEEEEECCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHH
Q ss_conf 66999997889988886312783898608999973129943076787743234024579987179142989999999999
Q 006498 496 SLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMLLAAAEAL 575 (643)
Q Consensus 496 aLSNPT~~aEct~edA~~wT~GraifASGSPF~pv~~~Gkt~~p~Q~NN~yiFPGiglG~i~s~a~~Itd~M~laAA~aL 575 (643)
||||||+++||+||||++||+|+|||||||||+||+|+||+++||||||+|+|||||||+++++|++|||+|+++||++|
T Consensus 431 aLSNPt~~aE~~pe~a~~~t~G~aivATGspF~pV~~~Grs~~pnQ~NN~liFPGi~lGal~~~A~~Itd~M~~aAA~aL 510 (605)
T 1o0s_A 431 ALSNPTSKAECTAEEAYTFTNGAALYASGSPFPNFELNGHTYKPGQGNNAYIFPGVALGTILFQIRHVDNDLFLLAAKKV 510 (605)
T ss_dssp ECCSSGGGCSSCHHHHHHTTTSCCEEEESSCCCCEEETTEEECCEECCGGGTHHHHHHHHHHHTBSCCCHHHHHHHHHHH
T ss_pred ECCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCEEECCEEECCCCCCCEEECCCHHHHHHHCCCEECCHHHHHHHHHHH
T ss_conf 78997997673899998642588899978998873179878666655624565631045552178076899999999999
Q ss_pred HCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCC
Q ss_conf 72468667899864489998010279999999999999099999999323999999299656899999
Q 006498 576 AGQVTQENFDKGLLYPPFKNIRKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 643 (643)
Q Consensus 576 A~~v~~e~~~~g~i~P~i~~irevs~~VA~aVa~~A~~~GlA~~~~~p~dl~~~i~~~my~P~Y~~~~ 643 (643)
|++++++++..+.|||++++||+||.+||.||+++|+++|+|+..+.|+|+.+|++++||+|+|++|+
T Consensus 511 A~~v~~~~~~~~~i~P~~~dir~vs~~VA~AVa~~A~~~GvA~~~~~~~d~~~~i~~~~w~P~Y~~~~ 578 (605)
T 1o0s_A 511 ASCVTEDSLKVGRVYPQLKEIREISIQIAVEMAKYCYKNGTANLYPQPEDLEKYVRAQVYNTEYEELI 578 (605)
T ss_dssp HHTCCHHHHTTTCCSCCGGGHHHHHHHHHHHHHHHHHHTTCBCSSSCCSCHHHHHHHHSCCCSCCCCS
T ss_pred HHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC
T ss_conf 85025136898755689522657689999999999998299888898699999999844488887652
No 2
>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A
Probab=1.00 E-value=1 Score=1578.25 Aligned_cols=540 Identities=53% Similarity=0.934 Sum_probs=531.9
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 33211012767766889998887101457889973037999999999997417994468999899998629999999621
Q 006498 102 ASGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLID 181 (643)
Q Consensus 102 ~~G~~lL~~p~~NKGtAFt~~ER~~l~L~GLLPp~v~t~e~Q~~R~~~~~~~~~~~l~Ky~~L~~L~~rNe~LFY~ll~~ 181 (643)
++|+++|++|++|||||||.+||++|||+|||||+|+|+|+|++|+|.++++++++|+||+||++||++||+|||||+++
T Consensus 1 ~~G~~lL~~p~~NKGtAFt~~ER~~l~l~GLLPp~v~t~e~Q~~r~~~~~~~~~~~l~k~~~L~~L~~~Ne~Lfy~ll~~ 80 (555)
T 1gq2_A 1 KKGYEVLRDPHLNKGMAFTLEERQQLNIHGLLPPCFLGQDAQVYSILKNFERLTSDLDRYILLMSLQDRNEKLFYKVLTS 80 (555)
T ss_dssp CCTTHHHHCTTTCCGGGSCHHHHHHTTCTTSSCSCBCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred CCHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEHHHHHH
T ss_conf 97555416986557789899999877996378999689999999999998617985899999998417431001154765
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEEECCCEEECCCCCCCCCCCCCHH
Q ss_conf 60134873026205999998754413999541045791129999844999980299995084000378888765444303
Q 006498 182 NVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVG 261 (643)
Q Consensus 182 ~~ee~lPivYTPtVg~ac~~~s~i~r~p~Glyis~~d~g~i~~il~nwp~~~v~viVVTDG~rILGLGDlG~~GmgI~iG 261 (643)
|++|+|||+||||||++|++||+|||+|+|+|+|++|+|+++++++|||.++|++||||||||||||||||++|||||||
T Consensus 81 ~~~e~lpivYTP~V~~ac~~~s~i~~~p~g~yis~~d~~~i~~~l~n~~~~~~~v~VVTDG~~ILGLGD~G~~g~~ipvG 160 (555)
T 1gq2_A 81 DIERFMPIVYTPTVGLACQHYGLAFRRPRGLFITIHDRGHIATMLQSWPESVIKAIVVTDGERILGLGDLGCYGMGIPVG 160 (555)
T ss_dssp THHHHHHHHSTTHHHHHHHTHHHHCSSCCSEEEEGGGTTCHHHHHHTSSCSCCCEEEEECSSSCGGGCCCGGGGGHHHHH
T ss_pred HHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHH
T ss_conf 49985674638528999999998762923300366787899999961877783799997440210267778773650200
Q ss_pred HHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCH
Q ss_conf 46667661699999521222037899501447933214456677626668999999999998609972001203998718
Q 006498 262 KLSLYTALGGIRPSACLPVTIDVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNA 341 (643)
Q Consensus 262 Kl~LYta~gGI~P~~~LPI~LDvGTnNe~LL~DplYlGlr~~R~~geeY~~fidEfv~Av~~~fGp~~lIqfEDf~~~~A 341 (643)
|++|||+||||||++|||||||+|||||+||+||+|||+||+|++|+|||+|+||||++|+++|||+++||||||+++||
T Consensus 161 Kl~Ly~~~aGIdP~~~lPI~LD~GTnn~~LL~DplYlG~r~~Rv~g~eyd~fvdefv~av~~~fGp~~~I~~EDf~~~~a 240 (555)
T 1gq2_A 161 KLALYTACGGVKPHQCLPVMLDVGTDNETLLKDPLYIGLRHKRIRGQAYDDLLDEFMEAVTSRYGMNCLIQFEDFANANA 240 (555)
T ss_dssp HHHHHHHTTCCCGGGEEEEEEESCCCCHHHHHCTTCCSCSSCCCCTHHHHHHHHHHHHHHHHHHCTTCEEEECSCCHHHH
T ss_pred HHHHHHHCCCCCHHHEEEEEEECCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCH
T ss_conf 78886754688841162168504877065437986578677888658899999999999998618882885010598428
Q ss_pred HHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHCCEE
Q ss_conf 99999872798603057750579999999999998399987864998273658999999999999983599965412809
Q 006498 342 FDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKI 421 (643)
Q Consensus 342 f~lL~rYr~~~~~FNDDIQGTaaV~LAgllaAlk~~g~~L~d~riv~~GAGsAgiGIA~li~~~~~~~~G~s~eeAr~~i 421 (643)
|++|+|||+++|||||||||||+|+||||+||+|++|++|+||||||+|||+||+|||+||+.+|+++ |++++||+++|
T Consensus 241 f~il~ryr~~ipvFnDDiqGTa~V~lAgllnAlki~gk~l~d~riv~~GAGaAg~gia~ll~~~~~~~-G~~~eeA~~~i 319 (555)
T 1gq2_A 241 FRLLHKYRNKYCTFNDDIQGTASVAVAGLLAALRITKNRLSDHTVLFQGAGEAALGIANLIVMAMQKE-GVSKEEAIKRI 319 (555)
T ss_dssp HHHHHHHTTTSEEEETTTHHHHHHHHHHHHHHHHHHTSCGGGCCEEEECCSHHHHHHHHHHHHHHHHH-TCCHHHHHTTE
T ss_pred HHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHCCCHHHCEEEEECCCHHHHHHHHHHHHHHHHC-CCCHHHHHCCE
T ss_conf 99999973058776676340999999999999998489754558999787778999999999999876-99968872859
Q ss_pred EEEECCCCCCCCCCCCCCHHCHHHCCCCCCCCCHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHCCCCCCEEEECCCCC
Q ss_conf 99907896458974488422111012148988899998305996999735899997999999998079994798669999
Q 006498 422 WLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPT 501 (643)
Q Consensus 422 ~lvDs~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~evV~~vkPtvLIG~S~~~g~Fteevi~~Ma~~~erPIIFaLSNPT 501 (643)
|+||++|||+++|. +|+++|++||++.++.++|+|+|+.||||||||+|+++|+||+|+|++|+++|+|||||||||||
T Consensus 320 ~~~D~~Gli~~~r~-~l~~~k~~~A~~~~~~~~L~eav~~vkp~vlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSNPt 398 (555)
T 1gq2_A 320 WMVDSKGLIVKGRA-SLTPEKEHFAHEHCEMKNLEDIVKDIKPTVLIGVAAIGGAFTQQILQDMAAFNKRPIIFALSNPT 398 (555)
T ss_dssp EEEETTEECBTTCS-SCCTTGGGGCBSCCCCCCHHHHHHHHCCSEEEECSCCTTCSCHHHHHHHHHHCSSCEEEECCSSG
T ss_pred EEEECCCEEECCCC-CCHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCEEEECCCCC
T ss_conf 99979980328998-86499999986347779899998522998899936888988999999987158997798789979
Q ss_pred CCCCCCHHHHHCCCCCCEEEEECCCCCCCCC-CCEEECCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCC
Q ss_conf 9788998888631278389860899997312-994307678774323402457998717914298999999999972468
Q 006498 502 SQSECTAEEAYTWSQGRAIFASGSPFDPFEY-GDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMLLAAAEALAGQVT 580 (643)
Q Consensus 502 ~~aEct~edA~~wT~GraifASGSPF~pv~~-~Gkt~~p~Q~NN~yiFPGiglG~i~s~a~~Itd~M~laAA~aLA~~v~ 580 (643)
+++||+||||++||+|+|||||||||+||+| +||+++||||||+|+|||||||+++++|++|||+|+++||++||++++
T Consensus 399 ~~aE~~pe~a~~~t~G~aivATGspf~pv~~~~Grs~~pnQ~NN~liFPGi~~Gal~~~A~~Itd~M~~aAA~alA~~v~ 478 (555)
T 1gq2_A 399 SKAECTAEQLYKYTEGRGIFASGSPFDPVTLPSGQTLYPGQGNNSYVFPGVALGVISCGLKHIGDDVFLTTAEVIAQEVS 478 (555)
T ss_dssp GGCSSCHHHHHHHTTTCCEEEESSCCCCEECTTSCEECCEECCGGGTHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHTCC
T ss_pred CCCCCCHHHHHHHCCCCEEEEECCCCCCEEECCCCEECCCCCCCEEECCCHHHHHHHCCCEECCHHHHHHHHHHHHHCCC
T ss_conf 86676899999752588799968998872616985754665561566551336667418808889999999999985025
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCC
Q ss_conf 667899864489998010279999999999999099999999323999999299656899999
Q 006498 581 QENFDKGLLYPPFKNIRKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 643 (643)
Q Consensus 581 ~e~~~~g~i~P~i~~irevs~~VA~aVa~~A~~~GlA~~~~~p~dl~~~i~~~my~P~Y~~~~ 643 (643)
++++..+.|||++++||+||.+||.||+++|+++|+|+..+.|+|+.+|++++||+|+|++|+
T Consensus 479 ~~~~~~~~i~P~~~~ir~vs~~VA~aVa~~A~~~GvA~~~~~~~d~~~~i~~~~~~P~Y~~~~ 541 (555)
T 1gq2_A 479 EENLQEGRLYPPLVTIQQVSLKIAVRIAKEAYRNNTASTYPQPEDLEAFIRSQVYSTDYNCFV 541 (555)
T ss_dssp HHHHHHTCSSCCGGGHHHHHHHHHHHHHHHHHHTTCCCCSSCCSSHHHHHHTTSCCCSCCCCS
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC
T ss_conf 136898754689522657689999999999998299888998699999999845588887741
No 3
>1pj3_A NAD-dependent malic enzyme, mitochondrial; oxidative decarboxylase, oxidoreductase; HET: NAD; 2.10A {Homo sapiens} SCOP: c.2.1.7 c.58.1.3 PDB: 1pj2_A* 1do8_A* 1pj4_A* 1qr6_A* 1efl_A* 1pjl_A* 1efk_A* 1gz4_A* 1gz3_A*
Probab=1.00 E-value=1 Score=1574.99 Aligned_cols=542 Identities=50% Similarity=0.908 Sum_probs=532.5
Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 33321101276776688999888710145788997303799999999999741799446899989999862999999962
Q 006498 101 VASGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLI 180 (643)
Q Consensus 101 ~~~G~~lL~~p~~NKGtAFt~~ER~~l~L~GLLPp~v~t~e~Q~~R~~~~~~~~~~~l~Ky~~L~~L~~rNe~LFY~ll~ 180 (643)
..+|+++|++|++|||||||.+||++|||+|||||+|+|+|+|++|+|.++++++++|+||+||++||++||+|||||++
T Consensus 2 ~~~G~~lL~~p~~NKGtAFt~~ER~~l~l~GLLPp~v~t~e~Q~~r~~~~~~~~~~~l~k~~~L~~L~~~Ne~Lfy~ll~ 81 (564)
T 1pj3_A 2 KEKGKPLMLNPRTNKGMAFTLQERQMLGLQGLLPPKIETQDIQALRFHRNLKKMTSPLEKYIYIMGIQERNEKLFYRILQ 81 (564)
T ss_dssp CCCSTHHHHSTTTCCGGGSCHHHHHHTTCTTTSCSCCCCHHHHHHHHHHHHHHCCSHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCCHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEHHHHH
T ss_conf 87567772797655778989999986799747899847999999999999861799589999999863313000314464
Q ss_pred HCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEEECCCEEECCCCCCCCCCCCCH
Q ss_conf 16013487302620599999875441399954104579112999984499998029999508400037888876544430
Q 006498 181 DNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPV 260 (643)
Q Consensus 181 ~~~ee~lPivYTPtVg~ac~~~s~i~r~p~Glyis~~d~g~i~~il~nwp~~~v~viVVTDG~rILGLGDlG~~GmgI~i 260 (643)
+|++|+|||+||||||++|++||+|||+|+|+|+|++|+|+|+++|+|||.++|++||||||||||||||||++||||||
T Consensus 82 ~~~~e~lpivYTP~Vg~ac~~~s~i~~~p~g~ylsi~d~~~i~~~l~n~~~~~v~v~VVTDG~~ILGLGD~G~~gm~ipv 161 (564)
T 1pj3_A 82 DDIESLMPIVYTPTVGLACSQYGHIFRRPKGLFISISDRGHVRSIVDNWPENHVKAVVVTDGERILGLGDLGVYGMGIPV 161 (564)
T ss_dssp HCHHHHHHHHSTTHHHHHHHTHHHHCSSCCSEEEEGGGTTCHHHHHTTCSCSCCCEEEEECSSSCTTSCCCGGGGGHHHH
T ss_pred HCHHHHCCEEECCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEE
T ss_conf 48897288265861799999999875483302225257778999997288778369999744021207777877231221
Q ss_pred HHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCC
Q ss_conf 34666766169999952122203789950144793321445667762666899999999999860997200120399871
Q 006498 261 GKLSLYTALGGIRPSACLPVTIDVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGERILIQFEDFANHN 340 (643)
Q Consensus 261 GKl~LYta~gGI~P~~~LPI~LDvGTnNe~LL~DplYlGlr~~R~~geeY~~fidEfv~Av~~~fGp~~lIqfEDf~~~~ 340 (643)
||++|||+||||||++|||||||+|||||+||+||+|||+||+|++|+|||+|+||||++|+.+|||+++||||||+++|
T Consensus 162 GKl~Ly~~~aGIdP~~~lPI~lDvgTnn~~LL~DPlYlG~r~~Rv~g~eYd~fvdefv~av~~~fG~~~~I~~EDf~~~~ 241 (564)
T 1pj3_A 162 GKLCLYTACAGIRPDRCLPVCIDVGTDNIALLKDPFYMGLYQKRDRTQQYDDLIDEFMKAITDRYGRNTLIQFEDFGNHN 241 (564)
T ss_dssp HHHHHHHHHHCCCGGGEEEEEEESCCCCTTGGGCTTCCSCSSCCCCSHHHHHHHHHHHHHHHHHHCTTCEEEECSCCHHH
T ss_pred HHHHHHHHCCCCCHHHEEEEEEECCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEHHCCCCC
T ss_conf 49998876169885324015851376714323697435767788761567889999999999872987377413148843
Q ss_pred HHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHCCE
Q ss_conf 89999987279860305775057999999999999839998786499827365899999999999998359996541280
Q 006498 341 AFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKK 420 (643)
Q Consensus 341 Af~lL~rYr~~~~~FNDDIQGTaaV~LAgllaAlk~~g~~L~d~riv~~GAGsAgiGIA~li~~~~~~~~G~s~eeAr~~ 420 (643)
||++|+|||+++|||||||||||+|+||||+||+|++|++|+||||||+|||+||+|||+||+.+|++ .|++++||+++
T Consensus 242 af~il~ryr~~ipvFnDDiqGTa~V~lAgllnAlki~gk~l~d~riv~~GAGaAgigia~ll~~~m~~-~Gl~~eeA~~~ 320 (564)
T 1pj3_A 242 AFRFLRKYREKYCTFNDDIQGTAAVALAGLLAAQKVISKPISEHKILFLGAGEAALGIANLIVMSMVE-NGLSEQEAQKK 320 (564)
T ss_dssp HHHHHHHHTTTSSEEEHHHHHHHHHHHHHHHHHHHHHCCCGGGCCEEEECCSHHHHHHHHHHHHHHHH-TTCCHHHHHHT
T ss_pred HHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHHHCCCHHHCEEEEECCCHHHHHHHHHHHHHHHH-CCCCHHHHHCC
T ss_conf 89999986338877477776189999999999999819967682799967777899999999999987-59985775080
Q ss_pred EEEEECCCCCCCCCCCCCCHHCHHHCCCCCCC--CCHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHCCCCCCEEEECC
Q ss_conf 99990789645897448842211101214898--8899998305996999735899997999999998079994798669
Q 006498 421 IWLVDSKGLIVSSRLESLQHFKKPWAHEHEPV--KELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLS 498 (643)
Q Consensus 421 i~lvDs~GLi~~~R~~~l~~~k~~fA~~~~~~--~~L~evV~~vkPtvLIG~S~~~g~Fteevi~~Ma~~~erPIIFaLS 498 (643)
||+||++|||+++|.++|+++|++||++.++. ++|+|+|+.||||||||+|+++|+||+|+|++|+++|+||||||||
T Consensus 321 i~~~D~~Gli~~~r~~~l~~~k~~~A~~~~~~~~~~L~eav~~vkp~vlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLS 400 (564)
T 1pj3_A 321 IWMFDKYGLLVKGRKAKIDSYQEPFTHSAPESIPDTFEDAVNILKPSTIIGVAGAGRLFTPDVIRAMASINERPVIFALS 400 (564)
T ss_dssp EEEEETTEECBTTCSSCCCTTTGGGCBCCCSSCCSSHHHHHHHHCCSEEEECCCSSCCSCHHHHHHHHHHCSSCEEEECC
T ss_pred EEEEECCCEEECCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCEEEECC
T ss_conf 99993798078987200209999998745745568999999642998899947889988999999997158997798789
Q ss_pred CCCCCCCCCHHHHHCCCCCCEEEEECCCCCCCCC-CCEEECCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHC
Q ss_conf 9999788998888631278389860899997312-994307678774323402457998717914298999999999972
Q 006498 499 NPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEY-GDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMLLAAAEALAG 577 (643)
Q Consensus 499 NPT~~aEct~edA~~wT~GraifASGSPF~pv~~-~Gkt~~p~Q~NN~yiFPGiglG~i~s~a~~Itd~M~laAA~aLA~ 577 (643)
|||+++||+||||++||+|+|||||||||+||+| +||+|+||||||+|+|||||||+++++|++|||+|+++||++||+
T Consensus 401 NPt~~aE~~pe~a~~~t~G~aivATGspf~pv~~~~G~~~~pnQ~NN~liFPGi~~Gal~~~A~~Itd~M~~aAA~aLA~ 480 (564)
T 1pj3_A 401 NPTAQAECTAEEAYTLTEGRCLFASGSPFGPVKLTDGRVFTPGQGNNVYIFPGVALAVILCNTRHISDSVFLEAAKALTS 480 (564)
T ss_dssp SSGGGCSCCHHHHHHHTTTCCEEEESSCCCCEECTTSCEECCEECCGGGTHHHHHHHHHHTTCSCCCHHHHHHHHHHHHT
T ss_pred CCCCCCCCCHHHHHHHCCCCEEEEECCCCCCEEECCCCEECCCCCCEEEECCCHHHHHHHCCCEECCHHHHHHHHHHHHH
T ss_conf 97986674899998645698899858998863615885644654550566451336667518808789999999999985
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCC
Q ss_conf 468667899864489998010279999999999999099999999323999999299656899999
Q 006498 578 QVTQENFDKGLLYPPFKNIRKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAYRTYR 643 (643)
Q Consensus 578 ~v~~e~~~~g~i~P~i~~irevs~~VA~aVa~~A~~~GlA~~~~~p~dl~~~i~~~my~P~Y~~~~ 643 (643)
+++++++..+.|||+++++|+||.+||.||+++|+++|+|+..+.|+|+.+|++++||+|.|++|+
T Consensus 481 ~v~~~~~~~~~i~P~~~~~r~vs~~VA~aVa~~A~~~GvA~~~~~~~d~~~~i~~~~~~p~Y~~~~ 546 (564)
T 1pj3_A 481 QLTDEELAQGRLYPPLANIQEVSINIAIKVTEYLYANKMAFRYPEPEDKAKYVKERTWRSEYDSLL 546 (564)
T ss_dssp TCCHHHHHTTCSSCCGGGHHHHHHHHHHHHHHHHHHTTCCCCSSCCSSHHHHHHHTCCCCSCCCCC
T ss_pred HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
T ss_conf 025136898714689631667689999999999997299888898699999999972287898764
No 4
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=1.00 E-value=1 Score=918.05 Aligned_cols=383 Identities=30% Similarity=0.419 Sum_probs=343.4
Q ss_pred HHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEEECCCEEECCCCCCC-CCCCC
Q ss_conf 21601348730262059999987544139995410457911299998449999802999950840003788887-65444
Q 006498 180 IDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGC-HGMGI 258 (643)
Q Consensus 180 ~~~~ee~lPivYTPtVg~ac~~~s~i~r~p~Glyis~~d~g~i~~il~nwp~~~v~viVVTDG~rILGLGDlG~-~GmgI 258 (643)
+.+. +.||++||||||++|++|+ +|+++++++..+| ++++|||||||||||||||+ +||||
T Consensus 55 ~~~~-~dLslaYTPgVa~~c~~i~-------------~dp~~~~~yt~kg----n~VaVVTDG~aILGLGDiG~~agmpI 116 (487)
T 3nv9_A 55 LAGF-NWFNAYYTPGVSRISTNIR-------------DNNDSSLFYSLRG----NFVGVVSDSTRVLGDGDVTPPGGLGV 116 (487)
T ss_dssp CSSG-GGHHHHSTTTHHHHHHHHH-------------HCGGGHHHHSGGG----GEEEEEECSSSBGGGBCCCGGGGHHH
T ss_pred CCCH-HHCEEEECCCHHHHHHHHH-------------HCHHHHHHHCCCC----CEEEEEECCCEEEECCCCCCCCCCCH
T ss_conf 7997-8770344755599999999-------------6968776430468----77999975860402443352137730
Q ss_pred CHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCC
Q ss_conf 30346667661699999521222037899501447933214456677626668999999999998609972001203998
Q 006498 259 PVGKLSLYTALGGIRPSACLPVTIDVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGERILIQFEDFAN 338 (643)
Q Consensus 259 ~iGKl~LYta~gGI~P~~~LPI~LDvGTnNe~LL~DplYlGlr~~R~~geeY~~fidEfv~Av~~~fGp~~lIqfEDf~~ 338 (643)
|+||++|||+||||| |||||||+||+| +++|| |+|+ |||+++.++||. ||||||++
T Consensus 117 meGKl~Lyk~~aGId---~lPI~LD~gt~~--~~~d~---------------defv-e~v~~~~P~fG~---InlEDf~a 172 (487)
T 3nv9_A 117 MEGKALLMKYLGGID---AVPICIDSKNKE--GKNDP---------------DAVI-EFVQRIQHTFGA---INLEDISQ 172 (487)
T ss_dssp HHHHHHHHHHHHCCE---EEEEECCCBCTT--SCBCH---------------HHHH-HHHHHHGGGCSE---EEECSCCT
T ss_pred HHHHHHHHHHCCCCC---EEEEEEECCCCC--CCCCH---------------HHHH-HHHHHHCCCCCE---ECHHHCCC
T ss_conf 443778887557986---442677578865--66999---------------9999-999996788775---06754687
Q ss_pred CCHHHHHHHHCC--CCCEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHH
Q ss_conf 718999998727--986030577505799999999999983999878649982736589999999999999835999654
Q 006498 339 HNAFDLLEKYGT--THLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEE 416 (643)
Q Consensus 339 ~~Af~lL~rYr~--~~~~FNDDIQGTaaV~LAgllaAlk~~g~~L~d~riv~~GAGsAgiGIA~li~~~~~~~~G~s~ee 416 (643)
+|||++|+|||+ ++|||||||||||+|+||||+||+|++|++|+||||||+|||+||+|||+||+. .|+++
T Consensus 173 p~af~il~ryr~~~~ipvFnDD~qGTA~V~lAgllnAlki~gk~l~d~riV~~GAGaAGigia~ll~~-----~G~~~-- 245 (487)
T 3nv9_A 173 PNCYKILDVLRESCDIPVWHDDQQGTASVTLAGLLNALKLVKKDIHECRMVFIGAGSSNTTCLRLIVT-----AGADP-- 245 (487)
T ss_dssp THHHHHHHHHHHHCSSCEEETTTHHHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSHHHHHHHHHHHH-----TTCCG--
T ss_pred CHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHCEEEEECCCHHHHHHHHHHHH-----CCCCC--
T ss_conf 03899999998641587045541048899999999999985998203579998987889999999998-----49980--
Q ss_pred HCCEEEEEECCCCCCCCCCCCCC-----HHCHHHCCCC--CCCCCHHHHHHCCCCCEEEECCCC-CCCCCHHHHHHHHCC
Q ss_conf 12809999078964589744884-----2211101214--898889999830599699973589-999799999999807
Q 006498 417 TRKKIWLVDSKGLIVSSRLESLQ-----HFKKPWAHEH--EPVKELVDAVNAIKPTILIGTSGQ-GRTFTKEVVEAMASL 488 (643)
Q Consensus 417 Ar~~i~lvDs~GLi~~~R~~~l~-----~~k~~fA~~~--~~~~~L~evV~~vkPtvLIG~S~~-~g~Fteevi~~Ma~~ 488 (643)
++||+||++|||+++|.+ |. ++|.+||++. +...+|+|+|+. +|||||+|++ +|+||+|+|++|+
T Consensus 246 --~~i~l~D~~Gli~~~R~~-l~~~~~~~~k~~~A~~~n~~~~~~L~eav~~--adVlIG~S~~~pg~ft~e~V~~Ma-- 318 (487)
T 3nv9_A 246 --KKIVMFDSKGSLHNGRED-IKKDTRFYRKWEICETTNPSKFGSIAEACVG--ADVLISLSTPGPGVVKAEWIKSMG-- 318 (487)
T ss_dssp --GGEEEEETTEECCTTCHH-HHHCGGGHHHHHHHHHSCTTCCCSHHHHHTT--CSEEEECCCSSCCCCCHHHHHTSC--
T ss_pred --CCEEEEECCCCCCCCCCH-HHHHCCCHHHHHHHHHCCCCCCCCHHHHHHC--CCEEEEECCCCCCCCCHHHHHHHC--
T ss_conf --209998066541478300-1010015788999875055567899999821--999997156678978999998416--
Q ss_pred CCCCEEEECCCCCCCCCCCHHHHHCCCCCCEEEEECCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHCCCCCCHHHH
Q ss_conf 99947986699999788998888631278389860899997312994307678774323402457998717914298999
Q 006498 489 NEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDML 568 (643)
Q Consensus 489 ~erPIIFaLSNPT~~aEct~edA~~wT~GraifASGSPF~pv~~~Gkt~~p~Q~NN~yiFPGiglG~i~s~a~~Itd~M~ 568 (643)
+||||||||||| +||+||||++ +|+||||||+ +++|||+||+|+|||||||+++++|++|||+|+
T Consensus 319 -~~PIIFaLSNPt--pEi~pe~A~~--~G~aIvATGr----------sd~PnQ~NN~liFPGI~~Gal~~~A~~Itd~M~ 383 (487)
T 3nv9_A 319 -EKPIVFCCANPV--PEIYPYEAKE--AGAYIVATGR----------GDFPNQVNNSVGFPGILKGALIVRARKITDNMA 383 (487)
T ss_dssp -SSCEEEECCSSS--CSSCHHHHHH--TTCSEEEESC----------TTSSSBCCGGGTHHHHHHHHHHTTCSSCCHHHH
T ss_pred -CCCEEEECCCCC--CCCCHHHHHH--HCCEEEEECC----------CCCCCCCCCEEECCHHHHHHHHCCCCCCCHHHH
T ss_conf -798899789997--4589999987--3988999799----------898666762357641667888707815688999
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC-CCCHHHHHHHHHCC
Q ss_conf 9999999724686678998644899980102799999999999990999999-99323999999299
Q 006498 569 LAAAEALAGQVTQENFDKGLLYPPFKNIRKISAHIAAEVAAKAYELGLATRL-PPPKDLVKYAESCM 634 (643)
Q Consensus 569 laAA~aLA~~v~~e~~~~g~i~P~i~~irevs~~VA~aVa~~A~~~GlA~~~-~~p~dl~~~i~~~m 634 (643)
++||++||++++++++.++.|||++++ ++||.+||.||+++|+++|+|+.. +.++++.+++++.+
T Consensus 384 ~AAA~ALA~~v~~~~l~~~~i~P~~~d-~~Vs~~VA~AVa~aA~~~GvA~~~~~~~~~~~~~~~~~~ 449 (487)
T 3nv9_A 384 IAASRALAEFAEKRGINPDNIIGTMDE-PGIFPKEAADVAMQAIKDGVARVTDLTWQQVYDIAEHDI 449 (487)
T ss_dssp HHHHHHHHHHHHHTCCBTTBCSCCTTC-TTHHHHHHHHHHHHHHHHTCCSCCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCCCEECCCCC-CCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
T ss_conf 999999986277111789856489662-202799999999999981998888899999999999999
No 5
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=1.00 E-value=1 Score=841.83 Aligned_cols=361 Identities=28% Similarity=0.418 Sum_probs=335.9
Q ss_pred HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEEECCCEEECCCCCCC
Q ss_conf 99999621601348730262059999987544139995410457911299998449999802999950840003788887
Q 006498 174 LFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGC 253 (643)
Q Consensus 174 LFY~ll~~~~ee~lPivYTPtVg~ac~~~s~i~r~p~Glyis~~d~g~i~~il~nwp~~~v~viVVTDG~rILGLGDlG~ 253 (643)
+++++.+++.+ +|||+||||||++|++|+ + |+++++ +|+.++++++|||||+|||||||+|+
T Consensus 24 ~~~~~~~~~~~-~l~i~YtP~V~~~c~~i~---~----------~p~~v~----~~t~~~~~V~VvTdG~~iLGLGD~G~ 85 (398)
T 2a9f_A 24 VQPKVDIKTKH-DLSIAYTPGVASVSSAIA---K----------DKTLAY----DLTTKKNTVAVISDGTAVLGLGDIGP 85 (398)
T ss_dssp EEESSCCSSHH-HHHHHSTTTTHHHHHHHH---H----------CGGGHH----HHSGGGTEEEEEECSSSCTTSCCCCH
T ss_pred EEEECCCCCHH-HCEEEECCHHHHHHHHHH---H----------CHHHHH----HHCCCCCEEEEEECCCCCCCCCCCCC
T ss_conf 99821129978-895777841799999998---6----------989999----74145988999989832058887553
Q ss_pred C-CCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC-CCE
Q ss_conf 6-54443034666766169999952122203789950144793321445667762666899999999999860997-200
Q 006498 254 H-GMGIPVGKLSLYTALGGIRPSACLPVTIDVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGER-ILI 331 (643)
Q Consensus 254 ~-GmgI~iGKl~LYta~gGI~P~~~LPI~LDvGTnNe~LL~DplYlGlr~~R~~geeY~~fidEfv~Av~~~fGp~-~lI 331 (643)
+ |||||+||+.||++||||| |+|||||+|| +||||++++..| |. ..|
T Consensus 86 ~aG~pI~eGK~~Lf~~~agid---~~pi~Ldv~~---------------------------~dEfv~~v~~~~-p~F~~I 134 (398)
T 2a9f_A 86 EAAMPVMEGKAALFKAFAGVD---AIPIVLDTKD---------------------------TEEIISIVKALA-PTFGGI 134 (398)
T ss_dssp HHHHHHHHHHHHHHHHHSSCE---EEEEECCCCC---------------------------HHHHHHHHHHHG-GGCSEE
T ss_pred CCCCCCHHCHHHHHHHCCCCC---EEEEEECCCC---------------------------HHHHHHHHHHCC-CCEEEE
T ss_conf 468852117999987415985---2405857899---------------------------999999999769-825686
Q ss_pred EEECCCCCCHHHHHHHHCCC--CCEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHH
Q ss_conf 12039987189999987279--8603057750579999999999998399987864998273658999999999999983
Q 006498 332 QFEDFANHNAFDLLEKYGTT--HLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQ 409 (643)
Q Consensus 332 qfEDf~~~~Af~lL~rYr~~--~~~FNDDIQGTaaV~LAgllaAlk~~g~~L~d~riv~~GAGsAgiGIA~li~~~~~~~ 409 (643)
|||||++++||++|+|||++ +|||||||||||+|++||+++|+|++|++++|+||||+|||+||+|||++++..
T Consensus 135 ~lED~~~p~~f~il~~~r~~~~ipvf~DDiqGTa~V~lAall~al~l~g~~l~d~kVVi~GAGaAG~~iA~ll~~~---- 210 (398)
T 2a9f_A 135 NLEDISAPRCFEIEQRLIKECHIPVFHDDQHGTAIVVLAAIFNSLKLLKKSLDEVSIVVNGGGSAGLSITRKLLAA---- 210 (398)
T ss_dssp EECSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHTTTCCTTSCEEEEECCSHHHHHHHHHHHHH----
T ss_pred CCCCCCCHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHC----
T ss_conf 4023798679999999665278463512244289999999998898719987760799989888999999999976----
Q ss_pred CCCCHHHHCCEEEEEECCCCCCCCCCCCCCHHCHHHCCCCCC---CCCHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHH
Q ss_conf 599965412809999078964589744884221110121489---88899998305996999735899997999999998
Q 006498 410 TNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEP---VKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMA 486 (643)
Q Consensus 410 ~G~s~eeAr~~i~lvDs~GLi~~~R~~~l~~~k~~fA~~~~~---~~~L~evV~~vkPtvLIG~S~~~g~Fteevi~~Ma 486 (643)
|. ++||++|++|||+++|.++|+++|++||++... ..+|.|+|+. +|+|||+|+ +|+||+|+|+.|+
T Consensus 211 -Ga------~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~~~~~~~~L~eav~~--ADV~IG~Sa-pgl~T~EmVk~Ma 280 (398)
T 2a9f_A 211 -GA------TKVTVVDKFGIINEQEAAQLAPHHLDIAKVTNREFKSGTLEDALEG--ADIFIGVSA-PGVLKAEWISKMA 280 (398)
T ss_dssp -TC------CEEEEEETTEECCTTCCCSCCC---CHHHHHSCTTCCCSCSHHHHT--TCSEEECCS-TTCCCHHHHHTSC
T ss_pred -CC------CEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHCC--CCEEEECCC-CCCCCHHHHHHHC
T ss_conf -99------9599997988425895201119999985326765655309999556--999996688-8987999998637
Q ss_pred CCCCCCEEEECCCCCCCCCCCHHHHHCCCCCCEEEEECCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHCCCCCCHH
Q ss_conf 07999479866999997889988886312783898608999973129943076787743234024579987179142989
Q 006498 487 SLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDD 566 (643)
Q Consensus 487 ~~~erPIIFaLSNPT~~aEct~edA~~wT~GraifASGSPF~pv~~~Gkt~~p~Q~NN~yiFPGiglG~i~s~a~~Itd~ 566 (643)
++|||||||||| +||+||||++| |+|||||| |+++|||+||+|+|||||||+++++|++|||+
T Consensus 281 ---~~pIIfalsNPt--~E~~pe~a~~~--g~~i~atG----------rs~~p~Q~NN~~~FPgi~~Gal~~~a~~I~d~ 343 (398)
T 2a9f_A 281 ---ARPVIFAMANPI--PEIYPDEALEA--GAYIVGTG----------RSDFPNQINNVLAFPGIFRGALDARAKTITVE 343 (398)
T ss_dssp ---SSCEEEECCSSS--CSSCHHHHHTT--TCSEEEES----------CTTSSSBCCGGGTHHHHHHHHHHHTCSSCCHH
T ss_pred ---CCCEEEECCCCC--CCCCHHHHHHH--CCEEEEEC----------CCCCCCCCCCEEECCHHHHHHHHCCCCCCCHH
T ss_conf ---898999788997--56799999983--78199868----------97888867714573447789998289278999
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
Q ss_conf 9999999997246866789986448999801027999999999999909
Q 006498 567 MLLAAAEALAGQVTQENFDKGLLYPPFKNIRKISAHIAAEVAAKAYELG 615 (643)
Q Consensus 567 M~laAA~aLA~~v~~e~~~~g~i~P~i~~irevs~~VA~aVa~~A~~~G 615 (643)
|+++||++||++++++++.++.|||++++ |+||.+||.||+++|++..
T Consensus 344 m~~aAa~alA~~~~~~~~~~~~i~P~~~~-~~v~~~VA~aVa~~A~~~~ 391 (398)
T 2a9f_A 344 MQIAAAKGIASLVPDDALSTTNIIPDAFK-EGVAEIVAKSVRSVVLKSE 391 (398)
T ss_dssp HHHHHHHHHHHTCSSCSSCCSCCSCSSTT-HHHHHHHTTTTCCCCC---
T ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCCC-CHHHHHHHHHHHHHHHHHC
T ss_conf 99999999985077012788756799874-4247999999999999817
No 6
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=1.00 E-value=1 Score=798.26 Aligned_cols=354 Identities=28% Similarity=0.435 Sum_probs=329.6
Q ss_pred HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEEECCCEEECCCCCC
Q ss_conf 99999962160134873026205999998754413999541045791129999844999980299995084000378888
Q 006498 173 KLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLG 252 (643)
Q Consensus 173 ~LFY~ll~~~~ee~lPivYTPtVg~ac~~~s~i~r~p~Glyis~~d~g~i~~il~nwp~~~v~viVVTDG~rILGLGDlG 252 (643)
..++++.+++.++ |||+||||||++|++|+ ++|. +++ +|+.++++++|||||+|||||||+|
T Consensus 27 ~~~~~~~~~~~~~-l~i~YtP~V~~~c~~~~---~~p~----------~v~----~~t~~~~~V~VvTdg~~vLGlGD~G 88 (388)
T 1vl6_A 27 RTALPVEKVDRET-LSLLYTPGVADVARACA---EDPE----------KTY----VYTSRWNTVAVVSDGSAVLGLGNIG 88 (388)
T ss_dssp EEECSCSCCCHHH-HHHHSTTTHHHHHHHHH---HCGG----------GHH----HHSGGGGEEEEEECSTTBTTTBSCC
T ss_pred EEEEEEECCCHHH-CEEEECCHHHHHHHHHH---HCHH----------HHH----HHCCCCCEEEEEECCCCCCCCCCCC
T ss_conf 9998420299788-93788841799999998---4989----------898----5322687699998980126888656
Q ss_pred CC-CCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC-CC
Q ss_conf 76-54443034666766169999952122203789950144793321445667762666899999999999860997-20
Q 006498 253 CH-GMGIPVGKLSLYTALGGIRPSACLPVTIDVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGER-IL 330 (643)
Q Consensus 253 ~~-GmgI~iGKl~LYta~gGI~P~~~LPI~LDvGTnNe~LL~DplYlGlr~~R~~geeY~~fidEfv~Av~~~fGp~-~l 330 (643)
++ |||||+||+.||++||||| |+|||||+|+ +||||++|+..| |. ..
T Consensus 89 ~~ag~pI~egK~~Lf~~~agid---~~pi~ldv~~---------------------------~dE~v~~vk~~~-p~f~~ 137 (388)
T 1vl6_A 89 PYGALPVMEGKAFLFKAFADID---AFPICLSESE---------------------------EEKIISIVKSLE-PSFGG 137 (388)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCE---EEEEECSCCC---------------------------HHHHHHHHHHTG-GGCSE
T ss_pred CCCCCCCHHCHHHHHHHCCCCC---EEEEEECCCC---------------------------HHHHHHHHHHCC-CCCEE
T ss_conf 4468851117999997525986---3757847999---------------------------999999999718-85137
Q ss_pred EEEECCCCCCHHHHHHHHCC--CCCEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHH
Q ss_conf 01203998718999998727--9860305775057999999999999839998786499827365899999999999998
Q 006498 331 IQFEDFANHNAFDLLEKYGT--THLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISK 408 (643)
Q Consensus 331 IqfEDf~~~~Af~lL~rYr~--~~~~FNDDIQGTaaV~LAgllaAlk~~g~~L~d~riv~~GAGsAgiGIA~li~~~~~~ 408 (643)
||||||++++||++|+|||+ ++||||||||||++|++||+++|++++|++++|+||||+|||+||+++|++++..
T Consensus 138 i~lED~~~p~af~il~r~r~~~~Ipvf~DDiqGTasV~lAal~~A~~i~g~~l~~~kVVv~GAGaAG~~iAkll~~~--- 214 (388)
T 1vl6_A 138 INLEDIGAPKCFRILQRLSEEMNIPVFHDDQQGTAVVVSAAFLNALKLTEKKIEEVKVVVNGIGAAGYNIVKFLLDL--- 214 (388)
T ss_dssp EEECSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHHHTCCTTTCEEEEECCSHHHHHHHHHHHHH---
T ss_pred ECHHHCCCHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHC---
T ss_conf 38755578789999999655258452312223689999999999999849997776899989878999999999967---
Q ss_pred HCCCCHHHHCCEEEEEECCCCCCCCCCCC-CCHHCHHHCCCCCC---CCCHHHHHHCCCCCEEEECCCCCCCCCHHHHHH
Q ss_conf 35999654128099990789645897448-84221110121489---888999983059969997358999979999999
Q 006498 409 QTNMPLEETRKKIWLVDSKGLIVSSRLES-LQHFKKPWAHEHEP---VKELVDAVNAIKPTILIGTSGQGRTFTKEVVEA 484 (643)
Q Consensus 409 ~~G~s~eeAr~~i~lvDs~GLi~~~R~~~-l~~~k~~fA~~~~~---~~~L~evV~~vkPtvLIG~S~~~g~Fteevi~~ 484 (643)
| .++||++|++|||+.+|.+. |+++|+.||++... ..+|.|+|+. +|+|||+|+ +++||+|+|+.
T Consensus 215 --G------~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~~~~~~L~eav~~--ADVlIG~Sa-p~l~t~emVk~ 283 (388)
T 1vl6_A 215 --G------VKNVVAVDRKGILNENDPETCLNEYHLEIARITNPERLSGDLETALEG--ADFFIGVSR-GNILKPEWIKK 283 (388)
T ss_dssp --T------CCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTTCCCSCHHHHHTT--CSEEEECSC-SSCSCHHHHTT
T ss_pred --C------CCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCC--CCEEEEECC-CCCCCHHHHHH
T ss_conf --9------986999989995227986543479999997765335764049999703--999999078-88649999972
Q ss_pred HHCCCCCCEEEECCCCCCCCCCCHHHHHCCCCCCEEEEECCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHCCCCCC
Q ss_conf 98079994798669999978899888863127838986089999731299430767877432340245799871791429
Q 006498 485 MASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVH 564 (643)
Q Consensus 485 Ma~~~erPIIFaLSNPT~~aEct~edA~~wT~GraifASGSPF~pv~~~Gkt~~p~Q~NN~yiFPGiglG~i~s~a~~It 564 (643)
|+ ++||||+||||| +||+||||++| |+|||||| ++++|||+||+|+|||||||+++++|+ ||
T Consensus 284 Ma---~~pIIfalSNPt--~E~~p~~a~~~--g~~i~atG----------r~~~p~Q~NN~~~FPgi~~Gal~~~a~-i~ 345 (388)
T 1vl6_A 284 MS---RKPVIFALANPV--PEIDPELAREA--GAFIVATG----------RSDHPNQVNNLLAFPGIMKGAVEKRSK-IT 345 (388)
T ss_dssp SC---SSCEEEECCSSS--CSSCHHHHHHT--TCSEEEES----------CTTSSSBCCGGGTHHHHHHHHHHHCSC-CC
T ss_pred CC---CCCEEEECCCCC--CCCCHHHHHHH--CCEEEEEC----------CCCCCCCCCCEEECCHHHHHHHHCCCC-CC
T ss_conf 37---897899768998--78799999983--57399868----------978787677246733476788753981-68
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 89999999999724686678998644899980102799999999999
Q 006498 565 DDMLLAAAEALAGQVTQENFDKGLLYPPFKNIRKISAHIAAEVAAKA 611 (643)
Q Consensus 565 d~M~laAA~aLA~~v~~e~~~~g~i~P~i~~irevs~~VA~aVa~~A 611 (643)
|+|+++||++||+++ ++.++.|||++++ |+||.+||.||+++|
T Consensus 346 ~~m~~aAa~alA~~~---~~~~~~i~P~~~~-~~v~~~vA~aVa~~A 388 (388)
T 1vl6_A 346 KNMLLSAVEAIARSC---EPEPERIIPEAFD-MKVHLNVYTAVKGSA 388 (388)
T ss_dssp HHHHHHHHHHHHHTS---CCBTTBSSCCTTC-HHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHH---CCCCCCCCCCCCC-CHHHHHHHHHHHHHC
T ss_conf 999999999998522---5688765599885-344699999999639
No 7
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=1.00 E-value=1 Score=655.24 Aligned_cols=382 Identities=30% Similarity=0.442 Sum_probs=345.5
Q ss_pred HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEEECCCEEECCCCCCCC-
Q ss_conf 9996216013487302620599999875441399954104579112999984499998029999508400037888876-
Q 006498 176 YKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCH- 254 (643)
Q Consensus 176 Y~ll~~~~ee~lPivYTPtVg~ac~~~s~i~r~p~Glyis~~d~g~i~~il~nwp~~~v~viVVTDG~rILGLGDlG~~- 254 (643)
+++.+++.+ +|||+||||||++|++|+ +|++++++ |+.++++++|||||+|||||||+|.+
T Consensus 24 ~~~~~~~~~-~l~~~YtP~v~~~c~~~~-------------~~~~~~~~----~~~~~~~v~vvtdgt~ilGlG~iG~hS 85 (439)
T 2dvm_A 24 PKVSLESRE-ELTLAYTPGVAEPCKEIA-------------RDPGKVYE----YTSKGNLVAVVSDGSRILGLGNIGPLA 85 (439)
T ss_dssp ESSCCCSHH-HHHHHSTTTTHHHHHHHH-------------HCGGGHHH----HSSGGGEEEEEECSTTBTTTBCCCHHH
T ss_pred EEECCCCHH-HCEEEECCHHHHHHHHHH-------------HCHHHHHH----HCCCCCEEEEEECCCEEECCCCEECCC
T ss_conf 830239978-895677803699999999-------------79898986----334586799997887086144143664
Q ss_pred CCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC-CCEEE
Q ss_conf 54443034666766169999952122203789950144793321445667762666899999999999860997-20012
Q 006498 255 GMGIPVGKLSLYTALGGIRPSACLPVTIDVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGER-ILIQF 333 (643)
Q Consensus 255 GmgI~iGKl~LYta~gGI~P~~~LPI~LDvGTnNe~LL~DplYlGlr~~R~~geeY~~fidEfv~Av~~~fGp~-~lIqf 333 (643)
++|+++||++||+++|||| ++|+++|+. | .|||+++++..+ |+ ..+||
T Consensus 86 ~sPvmh~ka~lf~~~gGid---~~yi~ldv~--------d-------------------~de~~~~v~~l~-~~f~Ginv 134 (439)
T 2dvm_A 86 GLPVMEGKALLFKRFGGVD---AFPIMIKEQ--------E-------------------PNKFIDIVKAIA-PTFGGINL 134 (439)
T ss_dssp HHHHHHHHHHHHHHHHCCE---EEEEECSCC--------S-------------------HHHHHHHHHHTG-GGCSEEEE
T ss_pred CCHHHHHHHHHHHHHCCCC---CEEEEEECC--------C-------------------HHHHHHHHHHHC-CCCCEEEE
T ss_conf 6779999999999947999---723444259--------9-------------------899999999837-36717999
Q ss_pred ECCCCCCHHHHHHHHCC--CCCEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCC
Q ss_conf 03998718999998727--9860305775057999999999999839998786499827365899999999999998359
Q 006498 334 EDFANHNAFDLLEKYGT--THLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTN 411 (643)
Q Consensus 334 EDf~~~~Af~lL~rYr~--~~~~FNDDIQGTaaV~LAgllaAlk~~g~~L~d~riv~~GAGsAgiGIA~li~~~~~~~~G 411 (643)
|||..|++|+++++|++ ++++||||+||||.+.++|+++|++..|++++++|+|++|||+||.+|+.+|.. .|
T Consensus 135 ED~T~P~k~~il~~l~~avNt~vf~dD~~gtgntd~aG~~~AL~~~g~~l~~~rvlvlGAGgAg~aia~~L~~-----~G 209 (439)
T 2dvm_A 135 EDIASPKCFYILERLREELDIPVFHDDQQGTAAVVLAGLLNALKVVGKKISEITLALFGAGAAGFATLRILTE-----AG 209 (439)
T ss_dssp CSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHHHTCCTTTCCEEEECCSHHHHHHHHHHHH-----TT
T ss_pred EECCCCHHHHHHHHHHHHCCEEEEECCCCEEEEHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHH-----CC
T ss_conf 8188853999999988754987991898178410899999999984988568889999954999999999998-----49
Q ss_pred CCHHHHCCEEEEEE----CCCCCCCCCCCC---CCHHCHHHCCCCC---CCCCHHHHHHCCCCCEEEECCCCC-CCCCHH
Q ss_conf 99654128099990----789645897448---8422111012148---988899998305996999735899-997999
Q 006498 412 MPLEETRKKIWLVD----SKGLIVSSRLES---LQHFKKPWAHEHE---PVKELVDAVNAIKPTILIGTSGQG-RTFTKE 480 (643)
Q Consensus 412 ~s~eeAr~~i~lvD----s~GLi~~~R~~~---l~~~k~~fA~~~~---~~~~L~evV~~vkPtvLIG~S~~~-g~Ftee 480 (643)
++ +++||++| ++||++++. . +.+++..|++... ...+|.|+++. +|++||+|..+ |.|+++
T Consensus 210 ~~----~~~I~vvd~~~~R~G~~~~a~--~~~~L~~~~~~~a~~~~~~~~~~~L~e~l~~--aDVlInaT~~~~G~~~~e 281 (439)
T 2dvm_A 210 VK----PENVRVVELVNGKPRILTSDL--DLEKLFPYRGWLLKKTNGENIEGGPQEALKD--ADVLISFTRPGPGVIKPQ 281 (439)
T ss_dssp CC----GGGEEEEEEETTEEEECCTTS--CHHHHSTTCHHHHTTSCTTCCCSSHHHHHTT--CSEEEECSCCCSSSSCHH
T ss_pred CC----CCEEEEEECCCCCCCCCCCCC--CHHHHHHHHHHHHHCCCCCCCCCCHHHHHCC--CCEEEECCCCCCCCCCHH
T ss_conf 99----671999976678767544663--2567899999973303544461349988606--999999377866788867
Q ss_pred HHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHCCCCCCEEEEECCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHCC
Q ss_conf 99999807999479866999997889988886312783898608999973129943076787743234024579987179
Q 006498 481 VVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGA 560 (643)
Q Consensus 481 vi~~Ma~~~erPIIFaLSNPT~~aEct~edA~~wT~GraifASGSPF~pv~~~Gkt~~p~Q~NN~yiFPGiglG~i~s~a 560 (643)
+++.|+ ++||||+||||+ +||++++|++| |++++|+| +.+.|+|+||+|+|||||+|+++++|
T Consensus 282 ~v~~m~---~~~iVfDLynP~--~t~~~~~A~~~--G~~ivatG----------~~ml~~Q~nn~~~FPGi~~g~l~~~a 344 (439)
T 2dvm_A 282 WIEKMN---EDAIVFPLANPV--PEILPEEAKKA--GARIVATG----------RSDYPNQINNLLGFPGIFRGALDVRA 344 (439)
T ss_dssp HHTTSC---TTCEEEECCSSS--CSSCHHHHHHH--TCSEECBS----------CSSSSSBCCGGGTHHHHHHHHHHTTC
T ss_pred HHHHCC---CCCEEEECCCCC--CCCHHHHHHHC--CCEEECCC----------CCHHHHHHHHHHCCCCCHHHHHHCCC
T ss_conf 898608---898999899998--75049999973--89298489----------72528999998655671488886388
Q ss_pred CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCC
Q ss_conf 1429899999999997246866789986448999801027999999999999909999999932399999929965689
Q 006498 561 IRVHDDMLLAAAEALAGQVTQENFDKGLLYPPFKNIRKISAHIAAEVAAKAYELGLATRLPPPKDLVKYAESCMYSPAY 639 (643)
Q Consensus 561 ~~Itd~M~laAA~aLA~~v~~e~~~~g~i~P~i~~irevs~~VA~aVa~~A~~~GlA~~~~~p~dl~~~i~~~my~P~Y 639 (643)
++|||+|+++||++||++++++ ..+.|||++++ |+||.+||.||+++|+++|+|+..+.|+|+.+|+++.||.+.|
T Consensus 345 ~~i~~~m~~aaa~ala~~~~~~--~~~~i~P~~~~-~~v~~~va~av~~~a~~~g~a~~~~~~~~~~~~~~~~~~~~~~ 420 (439)
T 2dvm_A 345 RTITDSMIIAAAKAIASIVEEP--SEENIIPSPLN-PIVYAREARAVAEEAMKEGVARTKVKGEWVEEHTIRLIEFYEN 420 (439)
T ss_dssp SCCCHHHHHHHHHHHHHTSSSC--BTTBCSCCTTC-HHHHHHHHHHHHHHHHHHTCCSSCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHCCCC--CCCCCCCCCCC-CHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 8789999999999998507535--68854799652-0023999999999999829998999828999999998520389
No 8
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=1.00 E-value=1 Score=77.77 Aligned_cols=131 Identities=18% Similarity=0.195 Sum_probs=104.2
Q ss_pred CCCCEE----------CCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHCC
Q ss_conf 798603----------0577505799999999999983999878649982736589999999999999835999654128
Q 006498 350 TTHLVF----------NDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRK 419 (643)
Q Consensus 350 ~~~~~F----------NDDIQGTaaV~LAgllaAlk~~g~~L~d~riv~~GAGsAgiGIA~li~~~~~~~~G~s~eeAr~ 419 (643)
..+|+| .|++.||+.++++|++. .++..+...+++++|.|..|.++|..+.. .|.
T Consensus 171 L~iPVinvndsvtk~~~Dn~~Gt~~slldgi~r---atg~~L~GktVgIiG~G~IG~~vA~~Lka-----~Ga------- 235 (436)
T 3h9u_A 171 LTIPAMNVNDSVTKSKFDNLYGCRESLVDGIKR---ATDVMIAGKTACVCGYGDVGKGCAAALRG-----FGA------- 235 (436)
T ss_dssp CCSCEEECTTSHHHHTTHHHHHHHHHHHHHHHH---HHCCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------
T ss_pred CCCCEEEECHHHHHHHHHCCCCCHHHHHHHHHH---HCCCCCCCCEEEEEEECHHHHHHHHHHHH-----CCC-------
T ss_conf 887568525066643432103201889999998---40973369999998539999999999998-----799-------
Q ss_pred EEEEEECCCCCCCCCCCCCCHHCHHHCC-CCCCCCCHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHCCCCCCEEEECC
Q ss_conf 0999907896458974488422111012-148988899998305996999735899997999999998079994798669
Q 006498 420 KIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLS 498 (643)
Q Consensus 420 ~i~lvDs~GLi~~~R~~~l~~~k~~fA~-~~~~~~~L~evV~~vkPtvLIG~S~~~g~Fteevi~~Ma~~~erPIIFaLS 498 (643)
+++++|+.. .+...|. ......+|.|+++. .|+++.+++..++++++.++.|. +..||+-.|
T Consensus 236 ~Viv~D~~p------------~~a~~A~~~G~~~~sL~eal~~--ADVVilt~gt~~iI~~e~l~~MK---~gAIVINvg 298 (436)
T 3h9u_A 236 RVVVTEVDP------------INALQAAMEGYQVLLVEDVVEE--AHIFVTTTGNDDIITSEHFPRMR---DDAIVCNIG 298 (436)
T ss_dssp EEEEECSCH------------HHHHHHHHTTCEECCHHHHTTT--CSEEEECSSCSCSBCTTTGGGCC---TTEEEEECS
T ss_pred EEEEECCCH------------HHHHHHHHHCCEECCHHHHHHH--CCEEEECCCCCCCCCHHHHHHCC---CCCEEEEEC
T ss_conf 899978984------------6668999719730689999853--99999889976766999995068---993899807
Q ss_pred CCCCCCCCCHHHHHCC
Q ss_conf 9999788998888631
Q 006498 499 NPTSQSECTAEEAYTW 514 (643)
Q Consensus 499 NPT~~aEct~edA~~w 514 (643)
++. .|+..+...+.
T Consensus 299 Rg~--vEID~~~L~~~ 312 (436)
T 3h9u_A 299 HFD--TEIQVAWLKAN 312 (436)
T ss_dssp SSG--GGBCHHHHHHH
T ss_pred CCC--CCCCHHHHHHH
T ss_conf 998--76488999862
No 9
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=1.00 E-value=1 Score=76.95 Aligned_cols=169 Identities=12% Similarity=0.194 Sum_probs=119.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHH---------------------HHHC-------CCCCEE-
Q ss_conf 76266689999999999986099720012039987189999---------------------9872-------798603-
Q 006498 305 AIGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNAFDLL---------------------EKYG-------TTHLVF- 355 (643)
Q Consensus 305 ~~geeY~~fidEfv~Av~~~fGp~~lIqfEDf~~~~Af~lL---------------------~rYr-------~~~~~F- 355 (643)
-+.+||+..++..+.. ..++|+.++ |-+..-...+. .||+ -.+|+|
T Consensus 112 ~~~~ey~~~~~~~~~~--~~~~p~~il---DdGgdl~~~~h~~~~~~~~~i~G~~EeTttGv~rl~~~~~~g~L~~Pvi~ 186 (435)
T 3gvp_A 112 ESEDDFWWCIDRCVNV--EGWQPNMIL---DDGGDLTHWIYKKYPNMFKKIKGIVEESVTGVHRLYQLSKAGKLCVPAMN 186 (435)
T ss_dssp CCHHHHHHHHHHHHCB--TTBCCSEEE---ESSSHHHHHHHHHCHHHHHTCCEEEECCHHHHHHHTCC--CCCCCSCEEE
T ss_pred CCHHHHHHHHHHHHHC--CCCCCCEEE---ECCHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHCCCCCCCEEE
T ss_conf 9989999999999823--478974798---36348999999871877752432574244558999999976998877797
Q ss_pred ---------CCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHCCEEEEEEC
Q ss_conf ---------05775057999999999999839998786499827365899999999999998359996541280999907
Q 006498 356 ---------NDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (643)
Q Consensus 356 ---------NDDIQGTaaV~LAgllaAlk~~g~~L~d~riv~~GAGsAgiGIA~li~~~~~~~~G~s~eeAr~~i~lvDs 426 (643)
.|++.||+-.+++|+..+ ++..+...+++++|+|..|.++|..+.. .|. +++.+|.
T Consensus 187 vnds~tK~~fDn~yGt~~s~~~gi~ra---t~~~L~GktV~ViG~G~IGk~vA~~Lra-----~Ga-------~Viv~D~ 251 (435)
T 3gvp_A 187 VNDSVTKQKFDNLYCCRESILDGLKRT---TDMMFGGKQVVVCGYGEVGKGCCAALKA-----MGS-------IVYVTEI 251 (435)
T ss_dssp CTTCHHHHHHHTHHHHHHHHHHHHHHH---HCCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECS
T ss_pred ECCHHHHHHHHHHHHHHHHHHHHHHHH---HCCEECCCEEEEEEECHHHHHHHHHHHH-----CCC-------EEEEEEC
T ss_conf 663666556664566678899999984---0962169999999049899999999987-----889-------9999938
Q ss_pred CCCCCCCCCCCCCHHCHHHCC-CCCCCCCHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCCC
Q ss_conf 896458974488422111012-1489888999983059969997358999979999999980799947986699999788
Q 006498 427 KGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSE 505 (643)
Q Consensus 427 ~GLi~~~R~~~l~~~k~~fA~-~~~~~~~L~evV~~vkPtvLIG~S~~~g~Fteevi~~Ma~~~erPIIFaLSNPT~~aE 505 (643)
... +...|. +.-...+|.|+++. .|+++.+++..++++++.++.|. +..||+-.+++. .|
T Consensus 252 dp~------------ra~~A~~~G~~v~~Leeal~~--ADIVi~atgt~~lI~~e~l~~MK---~gailINvgrg~--~E 312 (435)
T 3gvp_A 252 DPI------------CALQACMDGFRLVKLNEVIRQ--VDIVITCTGNKNVVTREHLDRMK---NSCIVCNMGHSN--TE 312 (435)
T ss_dssp CHH------------HHHHHHHTTCEECCHHHHTTT--CSEEEECSSCSCSBCHHHHHHSC---TTEEEEECSSTT--TT
T ss_pred CHH------------HHHHHHHCCCEECCHHHHHHC--CCEEEECCCCCCCCCHHHHHHCC---CCCEEEEECCCC--CC
T ss_conf 812------------467899719873359999843--99999999971447899998318---994999945998--66
Q ss_pred CCHHHHH
Q ss_conf 9988886
Q 006498 506 CTAEEAY 512 (643)
Q Consensus 506 ct~edA~ 512 (643)
+..+...
T Consensus 313 Id~~~L~ 319 (435)
T 3gvp_A 313 IDVASLR 319 (435)
T ss_dssp BTGGGGC
T ss_pred CCHHHHH
T ss_conf 7979998
No 10
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=1.00 E-value=1 Score=65.82 Aligned_cols=219 Identities=17% Similarity=0.216 Sum_probs=123.6
Q ss_pred CCCHHHHHHHCCCCCCEEEEEEECCCEEECCCCCCCC--CCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCC
Q ss_conf 9112999984499998029999508400037888876--54443034666766169999952122203789950144793
Q 006498 218 DKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCH--GMGIPVGKLSLYTALGGIRPSACLPVTIDVGTNNEKLLDDE 295 (643)
Q Consensus 218 d~g~i~~il~nwp~~~v~viVVTDG~rILGLGDlG~~--GmgI~iGKl~LYta~gGI~P~~~LPI~LDvGTnNe~LL~Dp 295 (643)
.+..+..+.++ +.+|+|.++++..+|++|.+.. |..|..+ ..+|. + +++|.+.+-.
T Consensus 26 tP~~v~~L~~~----G~~V~ve~~ag~~~gf~d~~y~~aGa~i~~~-~~~~~-a---------diil~vk~p~------- 83 (401)
T 1x13_A 26 TPKTVEQLLKL----GFTVAVESGAGQLASFDDKAFVQAGAEIVEG-NSVWQ-S---------EIILKVNAPL------- 83 (401)
T ss_dssp CHHHHHHHHHT----TCEEEEETTTTGGGTCCHHHHHHHTCEEECG-GGGGS-S---------SEEECSSCCC-------
T ss_pred CHHHHHHHHHC----CCEEEEEECCCCCCCCCHHHHHHCCCEEECC-HHHHC-C---------CEEEEECCCC-------
T ss_conf 99999999978----9989999789855687867798789899661-89843-8---------8599808999-------
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCC-CCCHHHHHHHHCCCCCEEC-CCCC----------CHH
Q ss_conf 321445667762666899999999999860997200120399-8718999998727986030-5775----------057
Q 006498 296 FYIGLRQKRAIGQEYAELLHEFMTAVKQNYGERILIQFEDFA-NHNAFDLLEKYGTTHLVFN-DDIQ----------GTA 363 (643)
Q Consensus 296 lYlGlr~~R~~geeY~~fidEfv~Av~~~fGp~~lIqfEDf~-~~~Af~lL~rYr~~~~~FN-DDIQ----------GTa 363 (643)
.+.+..+++ ...+|.|-..+ ++..++-|.+ ..+.+|+ +.+. .+.
T Consensus 84 -------------------~~~i~~l~~---~~~li~~~~~~~d~~~~~al~~--~gI~v~~~e~v~~~~~a~~l~~l~~ 139 (401)
T 1x13_A 84 -------------------DDEIALLNP---GTTLVSFIWPAQNPELMQKLAE--RNVTVMAMDSVPRISRAQSLDALSS 139 (401)
T ss_dssp -------------------HHHHTTCCT---TCEEEECCCGGGCHHHHHHHHH--TTCEEEEGGGCCCSGGGGGGCHHHH
T ss_pred -------------------HHHHHHHCC---CCCEEEEECCCCCHHHHHHHHH--CCCEEEEEEHHHHHHHHCCCCHHHH
T ss_conf -------------------999998617---9958999247789999999997--7997999602223443246626778
Q ss_pred HHHHHHHHHHHHHH----CC----------CCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHCCEEEEEECCCC
Q ss_conf 99999999999983----99----------98786499827365899999999999998359996541280999907896
Q 006498 364 SVVLAGLISAMKFL----GG----------SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 429 (643)
Q Consensus 364 aV~LAgllaAlk~~----g~----------~L~d~riv~~GAGsAgiGIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GL 429 (643)
...+|| .+|++.. ++ .+...+++++|+|.+|..++.++.. .|. +++.+|+..-
T Consensus 140 ~a~~ag-~~av~~~~~~~~~~~~~~~~~~g~l~g~~V~ViGaG~iG~~aa~~a~~-----~Ga-------~V~v~D~~~~ 206 (401)
T 1x13_A 140 MANIAG-YRAIVEAAHEFGRFFTGQITAAGKVPPAKVMVIGAGVAGLAAIGAANS-----LGA-------IVRAFDTRPE 206 (401)
T ss_dssp HHHHHH-HHHHHHHHHHCSSCSSCEEETTEEECCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSCGG
T ss_pred HHHHHH-HHHHHHHHHHCCCCCCCCEEECCCCCCCEEEEECCCHHHHHHHHHHHH-----CCC-------EEEEECCCHH
T ss_conf 999999-999999998545456886010157289989998987999999999997-----799-------8999808888
Q ss_pred CCCCCCCCCCH------------HCHHHCCCCCC------CCCHHHHHHCCCCCEEEECCCCC-----CCCCHHHHHHHH
Q ss_conf 45897448842------------21110121489------88899998305996999735899-----997999999998
Q 006498 430 IVSSRLESLQH------------FKKPWAHEHEP------VKELVDAVNAIKPTILIGTSGQG-----RTFTKEVVEAMA 486 (643)
Q Consensus 430 i~~~R~~~l~~------------~k~~fA~~~~~------~~~L~evV~~vkPtvLIG~S~~~-----g~Fteevi~~Ma 486 (643)
..+... .+.. .+..|++...+ ..++.+.++. .|++|++...+ .+++++.++.|.
T Consensus 207 ~~~~~~-~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~e~~~~--aDvVI~~~~~pg~~ap~li~~~~l~~mk 283 (401)
T 1x13_A 207 VKEQVQ-SMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELFAAQAKE--VDIIVTTALIPGKPAPKLITREMVDSMK 283 (401)
T ss_dssp GHHHHH-HTTCEECCC--------CCHHHHHHSHHHHHHHHHHHHHHHHH--CSEEEECCCCTTSCCCCCBCHHHHHTSC
T ss_pred HHHHHH-HCCCEEEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHCC--CCEEEECCCCCCCCCCEEECHHHHHCCC
T ss_conf 999999-7599899711200123455301222688887778899998678--9999978866899878541799995078
Q ss_pred CCCCCCEEEECCCCC
Q ss_conf 079994798669999
Q 006498 487 SLNEKPIIFSLSNPT 501 (643)
Q Consensus 487 ~~~erPIIFaLSNPT 501 (643)
...+|+-+|+|.
T Consensus 284 ---~g~vIVdva~~~ 295 (401)
T 1x13_A 284 ---AGSVIVDLAAQN 295 (401)
T ss_dssp ---TTCEEEETTGGG
T ss_pred ---CCCEEEEECCCC
T ss_conf ---996899976899
Done!