BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006503
(643 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q14149|MORC3_HUMAN MORC family CW-type zinc finger protein 3 OS=Homo sapiens GN=MORC3
PE=1 SV=3
Length = 939
Score = 213 bits (541), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 142/390 (36%), Positives = 218/390 (55%), Gaps = 29/390 (7%)
Query: 96 PKFLHSNATSHKWAFGAIAELLDNAVDEVQNGATFVKVDRVNIMKDNSPALVFIDDGGGM 155
PKFLH+N+TSH W F A+AEL+DNA D N A + +D+ I ++ L F D+G GM
Sbjct: 16 PKFLHTNSTSHTWPFSAVAELIDNAYDPDVN-AKQIWIDKTVI--NDHICLTFTDNGNGM 72
Query: 156 DPESLRKCMSLGYS---TKKANKTIGQYGNGFKTSTMRLGADVIVFSRATHESKSTQSIG 212
+ L K +S G+S T + +G YGNGFK+ +MRLG D IVF++ + + S+G
Sbjct: 73 TSDKLHKMLSFGFSDKVTMNGHVPVGLYGNGFKSGSMRLGKDAIVFTK----NGESMSVG 128
Query: 213 LLSYTYLRKTGQDDVIVPMIDFDISGHWAEPIIYSSQDDWSFNLKTILEWSPFASKSELL 272
LLS TYL + V+VP++ F+ H + S+ +L ILE S F+++ +LL
Sbjct: 129 LLSQTYLEVIKAEHVVVPIVAFN--KHRQMINLAESK----ASLAAILEHSLFSTEQKLL 182
Query: 273 QQFED-IGPHGTKVIIYNLWMNDEGVYELSFDDDEEDICLRDEANSGSLKKLPKKVLERQ 331
+ + IG GT++II+NL + + E F+ D+ DI + ++ + + KK KK ER
Sbjct: 183 AELDAIIGKKGTRIIIWNL-RSYKNATEFDFEKDKYDIRIPEDLDEITGKKGYKK-QERM 240
Query: 332 SHISYRIRYSLRAYASMLYLGKFDNFKIILRGKPIQQFHIADELKFPKVISYRPQVSAPL 391
I+ YSLRAY S+LYL +IILRG+ ++ ++ L + + YRP+ +
Sbjct: 241 DQIAPESDYSLRAYCSILYLKP--RMQIILRGQKVKTQLVSKSLAYIERDVYRPKFLS-- 296
Query: 392 KDATAETTIGFIKEAPALSVSGFNVYHKNRLIRPFWKVTGD--GSLKGNGVVGVLEANFI 449
T T GF G +YH+NRLI+ + KV + G GVVG++E NF+
Sbjct: 297 --KTVRITFGF--NCRNKDHYGIMMYHRNRLIKAYEKVGCQLRANNMGVGVVGIIECNFL 352
Query: 450 EPTHDKQDFERSTLFVRLESKLKQMTLEYW 479
+PTH+KQDF+ + + + L + +YW
Sbjct: 353 KPTHNKQDFDYTNEYRLTITALGEKLNDYW 382
>sp|Q8TE76|MORC4_HUMAN MORC family CW-type zinc finger protein 4 OS=Homo sapiens GN=MORC4
PE=1 SV=2
Length = 937
Score = 211 bits (536), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 150/433 (34%), Positives = 221/433 (51%), Gaps = 57/433 (13%)
Query: 94 VHPKFLHSNATSHKWAFGAIAELLDNAVD-EVQNGATFVKVDRVNIMKDNSPALVFIDDG 152
+ P++L SN++SH F AIAELLDNAVD +V F+ V+ V N L F DDG
Sbjct: 35 MSPRYLQSNSSSHTRPFSAIAELLDNAVDPDVSARTVFIDVEEVK----NKSCLTFTDDG 90
Query: 153 GGMDPESLRKCMSLGYS---TKKANKTIGQYGNGFKTSTMRLGADVIVFSRATHESKSTQ 209
GM P L + +S G++ KK+ IG +GNGFK+ +MRLG D +VF++ + T
Sbjct: 91 CGMTPHKLHRMLSFGFTDKVIKKSQCPIGVFGNGFKSGSMRLGKDALVFTK----NGGTL 146
Query: 210 SIGLLSYTYLRKTGQDDVIVPMIDFDISGHWAEPIIYSSQDDWSFNLKTILEWSPFASKS 269
++GLLS TYL VIVP++ F+ + +I + +D +L+ IL +S F ++
Sbjct: 147 TVGLLSQTYLECVQAQAVIVPIVPFN---QQNKKMIIT--EDSLPSLEAILNYSIFNREN 201
Query: 270 ELLQQFEDI-GPHGTKVIIYNLWMNDEGVYELSFDDDEEDICLRD-----EANSGSLKKL 323
+LL QF+ I G GT+V+I+N+ N G EL FD D+ DI + D + G +L
Sbjct: 202 DLLAQFDAIPGKKGTRVLIWNIRRNKNGKSELDFDTDQYDILVSDFDTEEKMTGGVTSEL 261
Query: 324 PKKVLERQSHISYRIRYSLRAYASMLYLGKFDNFKIILRGKPIQQFHIADELKFPKVISY 383
P+ YSLRA+ +LY+ KI LR K + IA L + +Y
Sbjct: 262 PE------------TEYSLRAFCGILYMKP--RMKIFLRQKKVTTQMIAKSLANVEYDTY 307
Query: 384 RPQVSAPLKDATAETTIGFIKEAPALSVSGFNVYHKNRLIRPFWKV---TGDGSLKGNGV 440
+P + + T GF + G +YH NRLI+ F KV +G GV
Sbjct: 308 KPTFT----NKQVRITFGF--SCKNSNQFGIMMYHNNRLIKSFEKVGCQVKPTRGEGVGV 361
Query: 441 VGVLEANFIEPTHDKQDFERSTLFVRLESKLKQMTLEYWKAYYHLIGHQLPASSSYNMES 500
+GV+E NF++P ++KQDFE + + + L Q YWK +S N E+
Sbjct: 362 IGVIECNFLKPAYNKQDFEYTKEYRLTINALAQKLNAYWKE----------KTSQDNFET 411
Query: 501 GGSVLSPVGHGPD 513
+V P+ PD
Sbjct: 412 -STVARPIPKVPD 423
>sp|Q8BMD7|MORC4_MOUSE MORC family CW-type zinc finger protein 4 OS=Mus musculus GN=Morc4
PE=2 SV=2
Length = 928
Score = 210 bits (534), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 144/408 (35%), Positives = 216/408 (52%), Gaps = 38/408 (9%)
Query: 82 STPVQGSLEHARVHPKFLHSNATSHKWAFGAIAELLDNAVD-EVQNGATFVKVDRVNIMK 140
S P + + + P++L SN++SH F AIAELLDNAVD +V F+ V+ V
Sbjct: 23 SVPQAFRIRLSTMSPRYLQSNSSSHTRPFSAIAELLDNAVDPDVSARTVFIDVEEVK--- 79
Query: 141 DNSPALVFIDDGGGMDPESLRKCMSLGYS---TKKANKTIGQYGNGFKTSTMRLGADVIV 197
P L F DDG GM P L + +S G++ KK+ + IG +GNGFK+ +MRLG D +V
Sbjct: 80 -KKPCLTFTDDGCGMTPHKLHRMLSFGFTDKVIKKSQRPIGVFGNGFKSGSMRLGKDALV 138
Query: 198 FSRATHESKSTQSIGLLSYTYLRKTGQDDVIVPMIDFDISGHWAEPIIYSSQDDWSFNLK 257
F++ + +T ++GLLS TYL VIVP++ F S + I+ +D +L+
Sbjct: 139 FTK----NGNTLAVGLLSQTYLECIQAQAVIVPIVPF--SQQNKKMIV---TEDSLPSLE 189
Query: 258 TILEWSPFASKSELLQQFEDI-GPHGTKVIIYNLWMNDEGVYELSFDDDEEDICLRD-EA 315
IL +S F + +LL QF+ I G GT+V+I+N+ N +G EL FD D+ DI + D +A
Sbjct: 190 AILNYSIFNCEKDLLSQFDAIPGKKGTRVLIWNIRRNKDGKSELDFDTDQYDILVSDFDA 249
Query: 316 NSGSLKKLPKKVLERQSHISYRIRYSLRAYASMLYLGKFDNFKIILRGKPIQQFHIADEL 375
+ + ++ E + YSLRA+ S+LY+ KI LR K + IA L
Sbjct: 250 EEKEIGGVTSELPETE--------YSLRAFCSILYMKP--RMKIFLRQKKVTTQMIAKSL 299
Query: 376 KFPKVISYRPQVSAPLKDATAETTIGFIKEAPALSVSGFNVYHKNRLIRPFWKVTGD--- 432
+ Y+P + + T GF + G +YH NRLI+ F K
Sbjct: 300 ANVEYDIYKPTST----NKQVRITFGF--SCKYHNQFGVMMYHNNRLIKAFEKAGCQLKP 353
Query: 433 GSLKGNGVVGVLEANFIEPTHDKQDFERSTLFVRLESKLKQMTLEYWK 480
+G GV+GV+E NF++P ++KQDFE + + + L + YWK
Sbjct: 354 TCGEGVGVIGVIECNFLKPAYNKQDFEYTKEYRLTINALARKLNAYWK 401
>sp|Q9WVL5|MORC1_MOUSE MORC family CW-type zinc finger protein 1 OS=Mus musculus GN=Morc1
PE=2 SV=1
Length = 950
Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/306 (35%), Positives = 160/306 (52%), Gaps = 48/306 (15%)
Query: 89 LEHARVHPKFLHSNATSHKWAFGAIAELLDNAVDEVQNGATFVKVDRVNIMKDNSP---- 144
L+ A++H F+H+N+T+H + FGA+AELLDNA D A V++D ++ DN
Sbjct: 7 LQRAKLHLDFIHANSTTHSFLFGALAELLDNARD-----AGAVRLDVFSV--DNETLQGG 59
Query: 145 -ALVFIDDGGGMDPESLRKCMSLGYSTKKAN--KTIGQYGNGFKTSTMRLGADVIVFSRA 201
L F+DDG GM P+ + G S K+ + K IGQYGNG K+ +MR+G D I+F++
Sbjct: 60 FMLCFLDDGCGMSPDEASDVIYFGTSKKRLSTLKFIGQYGNGLKSGSMRIGKDCILFTK- 118
Query: 202 THESKSTQSIGLLSYTYLRKTGQDDVIVPMIDFDISGHWAEPIIYSSQDD---WSFNLKT 258
+ T + S T+ K G +V+VP+ W S DD + L
Sbjct: 119 ---KEETMTCLFFSQTFCEKEGLTEVVVPI------PSWLTRTRESITDDPQKFFTELSI 169
Query: 259 ILEWSPFASKSELLQQFEDI-GPHGTKVIIYNLWMNDEGVYELSFDDDEEDICLRDEANS 317
I ++SPF +++EL+QQF+ I G GT +IIYNL + G EL D+EDI L EA
Sbjct: 170 IFKYSPFKTEAELMQQFDMIYGRCGTLLIIYNLKLLLSGEPELDVTTDKEDI-LMAEA-- 226
Query: 318 GSLKKLPKKVLERQSHISYRIRYSLRAYASMLYLGKFDNFKIILRGKPIQQFHIADELKF 377
P+++ ER+ S RAY ++LY KI ++ K +Q H+ L
Sbjct: 227 ------PEEIPERR---------SFRAYTAVLYFEP--RMKIFIQAKRVQTKHLCYSLYK 269
Query: 378 PKVISY 383
P+ Y
Sbjct: 270 PRKYQY 275
>sp|Q86VD1|MORC1_HUMAN MORC family CW-type zinc finger protein 1 OS=Homo sapiens GN=MORC1
PE=2 SV=2
Length = 984
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/303 (33%), Positives = 158/303 (52%), Gaps = 40/303 (13%)
Query: 88 SLEHARVHPKFLHSNATSHKWAFGAIAELLDNAVDEVQNGATFVKVDRVNIMK-DNSPAL 146
+L+ A++ F+H+N+T+H + FGA+AELLDNA D GA + V V+ K L
Sbjct: 7 ALQRAQLRLDFIHANSTTHSFLFGALAELLDNARDA---GAERLDVFSVDNEKLQGGFML 63
Query: 147 VFIDDGGGMDPESLRKCMSLGYSTKKAN--KTIGQYGNGFKTSTMRLGADVIVFSRATHE 204
F+DDG GM PE + G S K+ + K IGQYGNG K+ +MR+G D I+F++
Sbjct: 64 CFLDDGCGMSPEEASDIIYFGRSKKRLSTLKFIGQYGNGLKSGSMRIGKDFILFTK---- 119
Query: 205 SKSTQSIGLLSYTYLRKTGQDDVIVPMIDFDISGHWAEPIIYSSQDD---WSFNLKTILE 261
+ T + S T+ + +V+VPM W S DD ++ L I +
Sbjct: 120 KEETMTCVFFSQTFCEEESLSEVVVPM------PSWLIRTRESVTDDPQKFAMELSIIYK 173
Query: 262 WSPFASKSELLQQFEDI-GPHGTKVIIYNLWMNDEGVYELSFDDDEEDICLRDEANSGSL 320
+SPF +++EL+QQF+ I G GT ++IYNL + G EL D+EDI + +G+L
Sbjct: 174 YSPFKTEAELMQQFDVIYGKCGTLLVIYNLKLLLNGEPELDVKTDKEDILM-----AGAL 228
Query: 321 KKLPKKVLERQSHISYRIRYSLRAYASMLYLGKFDNFKIILRGKPIQQFHIADELKFPKV 380
+ P R+S RAY S+LY + +I ++ K ++ H+ L P+
Sbjct: 229 EDFPA-------------RWSFRAYTSVLYFNPW--MRIFIQAKRVKTKHLCYCLYRPRK 273
Query: 381 ISY 383
Y
Sbjct: 274 YLY 276
Score = 39.3 bits (90), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 410 SVSGFNVYHKNRLIRPFWKVTGDGSLK---GNGVVGVLEA--NFIEPTHDKQDFERSTLF 464
S +G +Y NRLI+ KV LK G GVVG++ +EP+H+KQ+F +
Sbjct: 364 SQAGMFIYSNNRLIKMHEKVGSQLKLKSLLGAGVVGIVNIPLEVMEPSHNKQEFLNVQEY 423
Query: 465 VRLESKLKQMTLEYWK 480
L + Q ++Y K
Sbjct: 424 NHLLKVMGQYLVQYCK 439
>sp|Q9Y6X9|MORC2_HUMAN MORC family CW-type zinc finger protein 2 OS=Homo sapiens GN=MORC2
PE=1 SV=2
Length = 1032
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/306 (31%), Positives = 158/306 (51%), Gaps = 42/306 (13%)
Query: 87 GSLEHARVHPKFLHSNATSHKWAFGAIAELLDNAVDEVQNGATFVKVDRVNIMKDNSP-- 144
SL A++ ++LH+N+T+H++ FGA+AEL+DNA D R++I +
Sbjct: 7 SSLNRAQLTFEYLHTNSTTHEFLFGALAELVDNARD--------ADATRIDIYAERREDL 58
Query: 145 ----ALVFIDDGGGMDPESLRKCMSLGYSTKKANKT--IGQYGNGFKTSTMRLGADVIVF 198
L F+DDG GMDP + G S K+ ++ IGQYGNG K+ +MR+G D I+F
Sbjct: 59 RGGFMLCFLDDGAGMDPSDAASVIQFGKSAKRTPESTQIGQYGNGLKSGSMRIGKDFILF 118
Query: 199 SRATHESKSTQSIGLLSYTYLRKTGQDDVIVPMIDFDISGHWAEPIIYSSQDDWSFNLKT 258
++ + T + LS T+ + G D+VIVP+ ++ EP+ + + ++ +
Sbjct: 119 TK----KEDTMTCLFLSRTFHEEEGIDEVIVPLPTWN--ARTREPVT-DNVEKFAIETEL 171
Query: 259 ILEWSPFASKSELLQQFEDI-GPHGTKVIIYNLWMNDEGVYELSFDDDEEDICLRDEANS 317
I ++SPF ++ E++ QF I G GT VII+NL + D G EL + DI + + +
Sbjct: 172 IYKYSPFRTEEEVMTQFMKIPGDSGTLVIIFNLKLMDNGEPELDIISNPRDIQMAETSPE 231
Query: 318 GSLKKLPKKVLERQSHISYRIRYSLRAYASMLYLGKFDNFKIILRGKPIQQFHIADELKF 377
G+ + R S RAYA++LY+ +I + G +Q ++ L
Sbjct: 232 GTKPE----------------RRSFRAYAAVLYIDP--RMRIFIHGHKVQTKRLSCCLYK 273
Query: 378 PKVISY 383
P++ Y
Sbjct: 274 PRMYKY 279
>sp|Q69ZX6|MOR2A_MOUSE MORC family CW-type zinc finger protein 2A OS=Mus musculus
GN=Morc2a PE=1 SV=2
Length = 1030
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 159/306 (51%), Gaps = 42/306 (13%)
Query: 87 GSLEHARVHPKFLHSNATSHKWAFGAIAELLDNAVDEVQNGATFVKVDRVNIMKDNSP-- 144
SL A++ ++LH+N+T+H++ FGA+AEL+DNA D R++I +
Sbjct: 7 SSLNRAQLTFEYLHTNSTTHEFLFGALAELVDNARD--------ADATRIDIYAERREDL 58
Query: 145 ----ALVFIDDGGGMDPESLRKCMSLGYSTKKANKT--IGQYGNGFKTSTMRLGADVIVF 198
L F+DDG GMDP + G S K+ ++ IGQYGNG K+ +MR+G D I+F
Sbjct: 59 RGGFMLCFLDDGAGMDPSDAASVIQFGKSAKRTPESTQIGQYGNGLKSGSMRIGKDFILF 118
Query: 199 SRATHESKSTQSIGLLSYTYLRKTGQDDVIVPMIDFDISGHWAEPIIYSSQDDWSFNLKT 258
++ + T + LS T+ + G D+VIVP+ ++ EPI + + ++ +
Sbjct: 119 TK----KEDTMTCLFLSRTFHEEEGIDEVIVPLPTWN--ARTREPIT-DNVEKFAIETEL 171
Query: 259 ILEWSPFASKSELLQQFEDI-GPHGTKVIIYNLWMNDEGVYELSFDDDEEDICLRDEANS 317
+ ++SPF ++ +++ QF I G GT VII+NL + D G EL + +DI + + +
Sbjct: 172 VYKYSPFHTEEQVMNQFMKIPGNSGTLVIIFNLKLMDNGEPELDIISNPKDIQMAETSPE 231
Query: 318 GSLKKLPKKVLERQSHISYRIRYSLRAYASMLYLGKFDNFKIILRGKPIQQFHIADELKF 377
G+ + R S RAYA++LY+ +I + G +Q ++ L
Sbjct: 232 GTKPE----------------RRSFRAYAAVLYIDP--RMRIFIHGHKVQTKRLSCCLYK 273
Query: 378 PKVISY 383
P++ Y
Sbjct: 274 PRMYKY 279
>sp|Q8C5W4|MOR2B_MOUSE MORC family CW-type zinc finger protein 2B OS=Mus musculus
GN=Morc2b PE=2 SV=2
Length = 1022
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 157/306 (51%), Gaps = 42/306 (13%)
Query: 87 GSLEHARVHPKFLHSNATSHKWAFGAIAELLDNAVDEVQNGATFVKVDRVNIMKDNSP-- 144
+L A++ +LH+N+T+H + FGA+AEL+DNA D R++I +
Sbjct: 7 STLNRAQLTFDYLHTNSTTHAFLFGALAELIDNARD--------ADATRIDIYAEKREDL 58
Query: 145 ----ALVFIDDGGGMDPESLRKCMSLGYSTKKANKT--IGQYGNGFKTSTMRLGADVIVF 198
L F+D+G GMDP + + G S K+ ++ IG+YGNG K+ +MR+G D I+F
Sbjct: 59 QGGFMLCFLDNGVGMDPNDVINVIQFGKSAKRTPESTQIGRYGNGLKSGSMRIGKDFILF 118
Query: 199 SRATHESKSTQSIGLLSYTYLRKTGQDDVIVPMIDFDISGHWAEPIIYSSQDDWSFNLKT 258
++ ++T S LS T+ + G D+VIVP+ ++ EP+ + + ++ +
Sbjct: 119 TK----KENTMSCLFLSRTFHEEEGIDEVIVPLPTWN--SQTREPVT-DNMEKFAIETEL 171
Query: 259 ILEWSPFASKSELLQQFEDI-GPHGTKVIIYNLWMNDEGVYELSFDDDEEDICLRDEANS 317
I ++SPF ++ E++ QF I G GT V+I+NL + D G EL + +DI + + +
Sbjct: 172 IYKYSPFHTEEEVMTQFTKISGTSGTLVVIFNLKLTDNGEPELDVTSNPKDIRMAEISQE 231
Query: 318 GSLKKLPKKVLERQSHISYRIRYSLRAYASMLYLGKFDNFKIILRGKPIQQFHIADELKF 377
G + R+S AYA++LY+ +I + G +Q + L
Sbjct: 232 GVKPE----------------RHSFCAYAAVLYIDP--RMRIFIHGHKVQTKKLCCCLYK 273
Query: 378 PKVISY 383
P+ ++
Sbjct: 274 PRKYTF 279
>sp|Q9ZCB9|HTPG_RICPR Chaperone protein HtpG OS=Rickettsia prowazekii (strain Madrid E)
GN=htpG PE=3 SV=1
Length = 621
Score = 36.6 bits (83), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 50/106 (47%), Gaps = 22/106 (20%)
Query: 126 NGATFVKVDRVNIMKDNSPALVFIDDGGGMDPESLRKCM-------------SLGYSTKK 172
N VKVD KDN ++ D+G GM+ E L + + +L +KK
Sbjct: 61 NFKIIVKVD-----KDNGQ-IIIRDNGIGMNKEDLIENLGTIARSGTANFLKNLSGDSKK 114
Query: 173 ANKTIGQYGNGFKTSTMRLGADVIVFSRATHESK--STQSIGLLSY 216
N IGQ+G GF +S M + V V SR ESK + +S GL Y
Sbjct: 115 DNMLIGQFGVGFYSSFM-VADKVTVTSRKAGESKVHTWESDGLGEY 159
>sp|Q68Y08|HTPG_RICTY Chaperone protein HtpG OS=Rickettsia typhi (strain ATCC VR-144 /
Wilmington) GN=htpG PE=3 SV=1
Length = 621
Score = 35.8 bits (81), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 50/106 (47%), Gaps = 22/106 (20%)
Query: 126 NGATFVKVDRVNIMKDNSPALVFIDDGGGMDPESLRKCM-------------SLGYSTKK 172
N VKVD KDN ++ D+G GM+ E L + + +L +KK
Sbjct: 61 NFKIIVKVD-----KDNEQ-IIIRDNGIGMNKEDLIENLGTIARSGTANFLKNLSGDSKK 114
Query: 173 ANKTIGQYGNGFKTSTMRLGADVIVFSRATHESK--STQSIGLLSY 216
N IGQ+G GF +S M + V V SR E+K + +S GL Y
Sbjct: 115 DNMLIGQFGVGFYSSFM-VADKVTVTSRKAGENKVYTWESDGLGEY 159
>sp|Q9K620|BCES_BACHD Sensor protein BceS OS=Bacillus halodurans (strain ATCC BAA-125 /
DSM 18197 / FERM 7344 / JCM 9153 / C-125) GN=bceS PE=3
SV=1
Length = 334
Score = 35.8 bits (81), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 4/81 (4%)
Query: 104 TSHKWAFGAIAELLDNAVDEVQNGATFVKVDRVNIMKDNSPALVFIDDGGGMDPESLRKC 163
T KW + +LL NAV + +K D V+ + D G G++P+ L +
Sbjct: 216 TDAKWLSFILRQLLSNAVKYSEASDIIIKSDVVS----GKTVVEVTDFGRGIEPKDLPRI 271
Query: 164 MSLGYSTKKANKTIGQYGNGF 184
G+++ K ++T G G G
Sbjct: 272 FEKGFTSTKTDQTNGATGMGL 292
>sp|A8GTZ5|HTPG_RICRS Chaperone protein HtpG OS=Rickettsia rickettsii (strain Sheila
Smith) GN=htpG PE=3 SV=1
Length = 621
Score = 35.4 bits (80), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 46/97 (47%), Gaps = 17/97 (17%)
Query: 136 VNIMKDNSPALVFIDDGGGMDPESLRKCM-------------SLGYSTKKANKTIGQYGN 182
V + KDN ++ D+G GM+ + L + + SL +KK N IGQ+G
Sbjct: 66 VKVDKDNGQ-IIIRDNGIGMNKDDLIENLGTIARSGTANFLKSLSGDSKKDNMLIGQFGV 124
Query: 183 GFKTSTMRLGADVIVFSRATHESKST--QSIGLLSYT 217
GF +S M + V V SR E K +S GL YT
Sbjct: 125 GFYSSFM-VADKVTVTSRKAGEDKVHIWESDGLGEYT 160
>sp|B0BVI6|HTPG_RICRO Chaperone protein HtpG OS=Rickettsia rickettsii (strain Iowa)
GN=htpG PE=3 SV=1
Length = 621
Score = 35.4 bits (80), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 46/97 (47%), Gaps = 17/97 (17%)
Query: 136 VNIMKDNSPALVFIDDGGGMDPESLRKCM-------------SLGYSTKKANKTIGQYGN 182
V + KDN ++ D+G GM+ + L + + SL +KK N IGQ+G
Sbjct: 66 VKVDKDNGQ-IIIRDNGIGMNKDDLIENLGTIARSGTANFLKSLSGDSKKDNMLIGQFGV 124
Query: 183 GFKTSTMRLGADVIVFSRATHESKST--QSIGLLSYT 217
GF +S M + V V SR E K +S GL YT
Sbjct: 125 GFYSSFM-VADKVTVTSRKAGEDKVHIWESDGLGEYT 160
>sp|A8F2Y0|HTPG_RICM5 Chaperone protein HtpG OS=Rickettsia massiliae (strain Mtu5)
GN=htpG PE=3 SV=1
Length = 623
Score = 35.4 bits (80), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 46/97 (47%), Gaps = 17/97 (17%)
Query: 136 VNIMKDNSPALVFIDDGGGMDPESLRKCM-------------SLGYSTKKANKTIGQYGN 182
V + KDN ++ D+G GM+ + L + + SL +KK N IGQ+G
Sbjct: 68 VKVDKDNGQ-IIIRDNGIGMNKDDLIENLGTIARSGTANFLKSLSGDSKKDNMLIGQFGV 126
Query: 183 GFKTSTMRLGADVIVFSRATHESKST--QSIGLLSYT 217
GF +S M + V V SR E K +S GL YT
Sbjct: 127 GFYSSFM-VADKVTVTSRKAGEDKVHIWESDGLGEYT 162
>sp|Q5NBJ3|GYRB_ORYSJ DNA gyrase subunit B, chloroplastic/mitochondrial OS=Oryza sativa
subsp. japonica GN=GYRB PE=2 SV=1
Length = 729
Score = 35.0 bits (79), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 59/118 (50%), Gaps = 17/118 (14%)
Query: 52 AIASSPPVNEAPESRSFWKAGTY-AANITIKSTPVQGSLEHARVHPKFLHSNATSHKWAF 110
A +S +EA + + AG Y AAN+ + +L+ R P ++ +T +
Sbjct: 69 AFMASTAASEAMQEKRV--AGEYTAANVQVLE-----ALDGVRTRPG-MYIGSTGSRGLH 120
Query: 111 GAIAELLDNAVDEVQNGATFVKVDRVNIMKDNSPALVFIDDGGG----MDPESLRKCM 164
+ E+LDNAVDE Q G KVD V + DNS ++ D+G G + P++ + C+
Sbjct: 121 HLVYEILDNAVDEAQAGYA-TKVD-VILHGDNSVSVT--DNGRGIPTDIHPQTKKSCV 174
>sp|A2QQE8|IML2_ASPNC Mitochondrial outer membrane protein iml2 OS=Aspergillus niger
(strain CBS 513.88 / FGSC A1513) GN=iml2 PE=3 SV=1
Length = 692
Score = 35.0 bits (79), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 56/121 (46%), Gaps = 7/121 (5%)
Query: 133 VDRVNIMKDNSPALVFIDDG-GGMDPESLRKCMS-LGYSTKKANKTIGQYGNGFKTSTMR 190
VD V + D ++F +G M E L + M+ L +S +ANKT + G K
Sbjct: 504 VDAVGV--DPIEEMIFFWNGHSRMTQEQLEESMTKLAWSESEANKTWSREGPEEKAILQL 561
Query: 191 LGADVIVFSRATHESKSTQSIGLLSYTYLRKTG--QDDVIVPMIDFDISGH-WAEPIIYS 247
L A V+ R E+K + S + TG +DD I P+ F+++ + W E YS
Sbjct: 562 LRAAVLRAMRRHDEAKEMIRTSIFSQDKSQFTGHLKDDWIYPVAHFEMAANLWMERPTYS 621
Query: 248 S 248
+
Sbjct: 622 A 622
>sp|Q8N9C0|IGS22_HUMAN Immunoglobulin superfamily member 22 OS=Homo sapiens GN=IGSF22 PE=1
SV=2
Length = 903
Score = 35.0 bits (79), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 277 DIGPHGTK--VIIYNLWMNDEGVYELSFDDDE--EDICLRDEANSGSLKKLPKKVLERQS 332
D+ GTK ++I N+ MND G+Y LS D ++ + DE + P KV ERQ+
Sbjct: 285 DVKQMGTKYMLVISNVNMNDAGIYSLSVGDKRMSAELTVLDEPLKFLGEMKPVKVTERQT 344
Query: 333 HISYRIRYS 341
+ + IR S
Sbjct: 345 AV-FEIRLS 352
>sp|A8F060|HTPG_RICCK Chaperone protein HtpG OS=Rickettsia canadensis (strain McKiel)
GN=htpG PE=3 SV=1
Length = 623
Score = 34.3 bits (77), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 20/89 (22%)
Query: 131 VKVDRVNIMKDNSPALVFIDDGGGMDPESLRKCM-------------SLGYSTKKANKTI 177
VK+D+ N+ ++ D+G GM+ E L + + +L +KK N I
Sbjct: 66 VKIDK------NNGQIIIRDNGIGMNKEDLIENLGTIARSGTANFLKNLSGDSKKDNMLI 119
Query: 178 GQYGNGFKTSTMRLGADVIVFSRATHESK 206
GQ+G GF +S M + V V SR E K
Sbjct: 120 GQFGVGFYSSFM-VADKVTVTSRKAGEDK 147
>sp|B3EL44|MUTL_CHLPB DNA mismatch repair protein MutL OS=Chlorobium phaeobacteroides
(strain BS1) GN=mutL PE=3 SV=1
Length = 624
Score = 34.3 bits (77), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 8/61 (13%)
Query: 112 AIAELLDNAVDEVQNGATFVKVDRVNIMKDNSPALV-FIDDGGGMDPESLRKCMSLGYST 170
+ ELL+NA+D GAT + V +KD LV ID+G GMD E +C+ ++
Sbjct: 27 VVKELLENAIDA---GATRITV----AIKDAGKELVQVIDNGSGMDEEDALRCVERFATS 79
Query: 171 K 171
K
Sbjct: 80 K 80
>sp|B4U9V3|ISPG_HYDS0 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
OS=Hydrogenobaculum sp. (strain Y04AAS1) GN=ispG PE=3
SV=1
Length = 354
Score = 33.9 bits (76), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 62/137 (45%), Gaps = 15/137 (10%)
Query: 279 GPHGTKVIIYNLWMNDEGVYELSFDDDEEDICLRDEANSGSLKKLPKKVLERQSHISYR- 337
G HG ++ N+ E V ++ + + +IC+R NSGSL+ K +LE+ + S
Sbjct: 96 GAHGIRINPGNIN-KKEIVRDIVLEAKKRNICVRLGVNSGSLE---KHLLEKYGYPSAEA 151
Query: 338 IRYSLRAYASMLYLGKFDNFKIILRGKPIQQFHIADELKFPKVISYRPQVSAPLKDATAE 397
+ S ++ F NFK+ ++G + Q +A+E+ + + PL E
Sbjct: 152 LAESALNWSEFFESLGFYNFKVSIKGSDVIQNALANEI-------FAEKTDTPLHIGITE 204
Query: 398 T---TIGFIKEAPALSV 411
T G +K + L +
Sbjct: 205 AGMGTQGIVKSSVGLGI 221
>sp|O67137|GYRB_AQUAE DNA gyrase subunit B OS=Aquifex aeolicus (strain VF5) GN=gyrB PE=3
SV=1
Length = 792
Score = 33.5 bits (75), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Query: 79 TIKSTPVQGSLEHARVHPKFLHSNATSHKWAFGAIAELLDNAVDEVQNGATFVKVDRVNI 138
T ++ LEH R+ P ++ + I E+LDNAVDE G + + V I
Sbjct: 13 TAEAIKAVSGLEHVRLRPA-MYIGDIGERGLHHLIWEILDNAVDEAVAG--YARNISVTI 69
Query: 139 MKDNSPALVFIDDGGGM 155
+DNS + DDG G+
Sbjct: 70 HRDNSVTVE--DDGRGI 84
>sp|Q6GH51|PARE_STAAR DNA topoisomerase 4 subunit B OS=Staphylococcus aureus (strain
MRSA252) GN=parE PE=3 SV=2
Length = 663
Score = 32.7 bits (73), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 56/115 (48%), Gaps = 12/115 (10%)
Query: 77 NITIKSTPVQGSLEHARVHPKFLHSNATSHKWAFGAIAELLDNAVDEVQNGATFVKVDRV 136
N + S V LE R P ++ +T + + E++DN+VDEV NG ++D V
Sbjct: 6 NYSDDSIQVLEGLEAVRKRPG-MYIGSTDKRGLHHLVYEIVDNSVDEVLNGYG-NEID-V 62
Query: 137 NIMKDNSPALVFIDDGGGMDPESLRK----CMSLGYSTKKANKTIGQYGNGFKTS 187
I KD S ++ D+G GM P + K + + ++ A GQ G+KTS
Sbjct: 63 TINKDGSISIE--DNGRGM-PTGIHKSGKPTVEVIFTVLHAGGKFGQ--GGYKTS 112
>sp|Q6G9K5|PARE_STAAS DNA topoisomerase 4 subunit B OS=Staphylococcus aureus (strain
MSSA476) GN=parE PE=3 SV=2
Length = 663
Score = 32.7 bits (73), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 56/115 (48%), Gaps = 12/115 (10%)
Query: 77 NITIKSTPVQGSLEHARVHPKFLHSNATSHKWAFGAIAELLDNAVDEVQNGATFVKVDRV 136
N + S V LE R P ++ +T + + E++DN+VDEV NG ++D V
Sbjct: 6 NYSDDSIQVLEGLEAVRKRPG-MYIGSTDKRGLHHLVYEIVDNSVDEVLNGYG-NEID-V 62
Query: 137 NIMKDNSPALVFIDDGGGMDPESLRK----CMSLGYSTKKANKTIGQYGNGFKTS 187
I KD S ++ D+G GM P + K + + ++ A GQ G+KTS
Sbjct: 63 TINKDGSISIE--DNGRGM-PTGIHKSGKPTVEVIFTVLHAGGKFGQ--GGYKTS 112
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.131 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 247,251,610
Number of Sequences: 539616
Number of extensions: 11100656
Number of successful extensions: 22398
Number of sequences better than 100.0: 42
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 22328
Number of HSP's gapped (non-prelim): 53
length of query: 643
length of database: 191,569,459
effective HSP length: 124
effective length of query: 519
effective length of database: 124,657,075
effective search space: 64697021925
effective search space used: 64697021925
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 65 (29.6 bits)