Query 006503
Match_columns 643
No_of_seqs 272 out of 1331
Neff 5.2
Searched_HMMs 29240
Date Tue Mar 26 18:18:20 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/006503.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_2131-2134//hhsearch_pdb/006503hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ioq_A Chaperone protein HTPG; 1.0 1 1 142.9 15.2 105 87-203 15-145 (624)
2 1y4s_A Chaperone protein HTPG; 1.0 1 1 142.4 19.4 298 87-491 15-387 (559)
3 2o1u_A Endoplasmin; GRP94, HSP 1.0 1 1 141.8 17.5 106 87-204 33-167 (666)
4 1b63_A MUTL; DNA mismatch repa 1.0 1 1 130.2 15.1 273 107-475 23-332 (333)
5 2cg9_A ATP-dependent molecular 1.0 1 1 126.2 20.3 106 87-204 14-143 (677)
6 1yc1_A HSP 86, heat shock prot 1.0 1 1 120.0 5.4 130 62-203 27-184 (264)
7 3peh_A Endoplasmin homolog; st 1.0 1 1 119.8 8.7 106 87-204 34-164 (281)
8 3o0i_A HSP90AA1 protein; HSP90 1.0 1 1 119.5 4.8 106 86-203 47-176 (256)
9 1qy5_A Endoplasmin; GRP94, NEC 1.0 1 1 119.2 5.6 98 98-204 24-150 (269)
10 2gqp_A Endoplasmin; GRP94, HSP 1.0 1 1 118.6 4.5 96 99-203 29-153 (236)
No 1
>2ioq_A Chaperone protein HTPG; heat shock protein, HSP90; 3.50A {Escherichia coli} PDB: 2iop_A
Probab=1.00 E-value=1 Score=142.91 Aligned_cols=105 Identities=27% Similarity=0.330 Sum_probs=79.1
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHH-------------CCCCEEEEEEEECCCCCCCEEEEEECCC
Q ss_conf 853311126434334433420499999987304122562-------------7990699999971689988299997899
Q 006503 87 GSLEHARVHPKFLHSNATSHKWAFGAIAELLDNAVDEVQ-------------NGATFVKVDRVNIMKDNSPALVFIDDGG 153 (643)
Q Consensus 87 ~~l~~~~i~p~fLhsnsTsh~~~f~AIaELIDNAiDA~~-------------~gAt~I~I~i~~~~~~~~~~I~I~DNG~ 153 (643)
.+++.+.-+ ||||.. .+|.|||+||+||.. ..++.+.|.|..+. +...|+|.|||.
T Consensus 15 ~Ll~ll~~~---lYsn~~------ifLrELIsNA~DA~~k~r~~~l~~~~~~~~a~~~~I~I~~d~--~~~~I~I~DnGi 83 (624)
T 2ioq_A 15 QLLHLMIHS---LYSNKE------IFLRELISNASDAADKLRFRALSNPDLYEGDGELRVRVSFDK--DKRTLTISDNGV 83 (624)
T ss_dssp CCHHHHHHH---HSSCTT------HHHHHHHHHHHHHHHHHHHHHHTSTTTTTTCCCCCEEEEEET--TTTEEEEEECSC
T ss_pred HHHHHHHHH---CCCCHH------HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEC--CCCEEEEEECCC
T ss_conf 999999873---379857------999999997998656567764268100367887479999968--974899998998
Q ss_pred CCCHHHHHHHH-HCCCCCCC------------CCCCCCCCCCCCCCCCCCCCCEEEEEEEECC
Q ss_conf 99998898965-21644555------------8988652123112212135998999942089
Q 006503 154 GMDPESLRKCM-SLGYSTKK------------ANKTIGQYGNGFKTSTMRLGADVIVFSRATH 203 (643)
Q Consensus 154 GMs~e~l~~~l-~~G~S~K~------------~~~~IG~yGiGlKsAs~~lg~~v~V~Sk~~~ 203 (643)
||+.+++..++ ++|+|.+. +...||+||+||++ ++.++.+++|.||..+
T Consensus 84 GMt~edl~~~l~tiA~Sg~~~f~~~l~~~~~~~~~~iG~fGvGfyS-~f~VadkV~V~Sr~~~ 145 (624)
T 2ioq_A 84 GMTRDEVIDHLGTIAKSGTKSFLESLGSDQAKDSQLIGQFGVGFYS-AFIVADKVTVRTRAAG 145 (624)
T ss_dssp CCCHHHHHHHHHHHCC---------------CCTTHHHHHHHHHHH-HHHHEEEEEEEEECTT
T ss_pred CCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHH-HHHCCCEEEEEECCCC
T ss_conf 9899999999876605561778987301111354445888843798-9705786999977899
No 2
>1y4s_A Chaperone protein HTPG; HSP90, molecular chaperone, ATPase; HET: ADP; 2.90A {Escherichia coli} PDB: 1y4u_A
Probab=1.00 E-value=1 Score=142.41 Aligned_cols=298 Identities=19% Similarity=0.264 Sum_probs=159.1
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHH-------------CCCCEEEEEEEECCCCCCCEEEEEECCC
Q ss_conf 853311126434334433420499999987304122562-------------7990699999971689988299997899
Q 006503 87 GSLEHARVHPKFLHSNATSHKWAFGAIAELLDNAVDEVQ-------------NGATFVKVDRVNIMKDNSPALVFIDDGG 153 (643)
Q Consensus 87 ~~l~~~~i~p~fLhsnsTsh~~~f~AIaELIDNAiDA~~-------------~gAt~I~I~i~~~~~~~~~~I~I~DNG~ 153 (643)
.+++.+.-+ ||||.. .+|.|||.||+||.. ..++.+.|.|..+. +...|+|.|||.
T Consensus 15 ~Ll~ll~~~---lYsn~~------ifLrELIsNA~DA~~k~r~~~l~~~~~~~~~~~~~I~I~~d~--~~~~I~I~DnGi 83 (559)
T 1y4s_A 15 QLLHLMIHS---LYSNKE------IFLRELISNASDAADKLRFRALSNPDLYEGDGELRVRVSFDK--DKRTLTISDNGV 83 (559)
T ss_dssp HHHHHHHHH---TGGGTT------HHHHHHHHHHHHHHHHHHHHHHHCGGGGCSCCCCCEEEEEET--TTTEEEEEECSS
T ss_pred HHHHHHHHH---CCCCHH------HHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCEEEEEEEC--CCCEEEEEECCC
T ss_conf 999999874---379848------999999987998757677764268111267876479999968--985899998998
Q ss_pred CCCHHHHHHHHH-CCCCCCC------------CCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEEEEEHH
Q ss_conf 999988989652-1644555------------898865212311221213599899994208998752256211100021
Q 006503 154 GMDPESLRKCMS-LGYSTKK------------ANKTIGQYGNGFKTSTMRLGADVIVFSRATHESKSTQSIGLLSYTYLR 220 (643)
Q Consensus 154 GMs~e~l~~~l~-~G~S~K~------------~~~~IG~yGiGlKsAs~~lg~~v~V~Sk~~~~~~~t~svgllS~tfl~ 220 (643)
||+.+++..++. +|+|.+. +...||+||+||++ ++.++..++|.||..++.. ..+
T Consensus 84 GMt~edl~~~l~tiA~Sg~~~f~e~l~~~~~~~~~~iG~fGvGfyS-~f~VadkV~V~Sr~~~~~~---~~~-------- 151 (559)
T 1y4s_A 84 GMTRDEVIDHLGTIAKSGTKSFLESLGSDQAKDSQLIGQFGVGFYS-AFIVADKVTVRTRAAGEKP---ENG-------- 151 (559)
T ss_dssp CCCHHHHHHHHSCCSCCCCCCTTCC--------CCCCSSCCCSGGG-HHHHEEEEEEEEECSSSCG---GGE--------
T ss_pred CCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHH-HHHCCCEEEEEECCCCCCC---CEE--------
T ss_conf 8899999999765515562778987411111354434888763565-6414576899975799888---724--------
Q ss_pred CCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCC
Q ss_conf 06999807622321589873233212573220011220003598899678888630059980199994552356884001
Q 006503 221 KTGQDDVIVPMIDFDISGHWAEPIIYSSQDDWSFNLKTILEWSPFASKSELLQQFEDIGPHGTKVIIYNLWMNDEGVYEL 300 (643)
Q Consensus 221 ~~~~~di~VPi~d~d~~~~~~~~ii~~~~edw~~~l~~Il~ySPf~se~eL~~qf~~i~~~GT~IiI~nL~~~~~g~~El 300 (643)
+.|+..+ ...+.. . | .. -..+||.|++. |+. + ..|
T Consensus 152 -----------~~w~s~g----------~~~~~i-----~---~----------~~-~~~~GT~I~L~-Lk~--d-~~E- 186 (559)
T 1y4s_A 152 -----------VFWESAG----------EGEYTV-----A---D----------IT-KEDRGTEITLH-LRE--G-EDE- 186 (559)
T ss_dssp -----------EEEEECS----------SSEEEE-----E---E----------EC-CCSCEEEEEEE-ECT--T-CGG-
T ss_pred -----------EEEEEEC----------CCEEEE-----E---E----------CC-CCCCCEEEEEE-ECC--H-HHH-
T ss_conf -----------8999937----------973588-----6---7----------77-78998399999-765--5-542-
Q ss_pred CCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEE---------------EECC-E
Q ss_conf 57898022321022345644541144552201102445444665665410499994699---------------9969-4
Q 006503 301 SFDDDEEDICLRDEANSGSLKKLPKKVLERQSHISYRIRYSLRAYASMLYLGKFDNFKI---------------ILRG-K 364 (643)
Q Consensus 301 df~~D~~DI~i~~~~~~~~~~~~~~~~~el~~hl~~~~~ySLRaYlSiLYL~~~~~fkI---------------~LnG-~ 364 (643)
|-. . . ++ .--++.|+. |+.. | ..+ .+|. +
T Consensus 187 -fle---~----------------~-------~I----~~iv~kys~--fi~~-P-I~~~~~e~~~~~~~~~~~~in~~~ 231 (559)
T 1y4s_A 187 -FLD---D----------------W-------RV----RSIISKYSD--HIAL-P-VEIEKREEKDGETVISWEKINKAQ 231 (559)
T ss_dssp -GSC---H----------------H-------HH----HHHHHHHHT--TCSS-C-EEEEEEECSTTSCEEEEEECCCCC
T ss_pred -CCH---H----------------H-------HH----HHHHHHHHC--CCCC-C-EEEEECCCCCCCCCCCEEEEECCC
T ss_conf -350---9----------------9-------99----999999734--5787-5-389611455665433228975783
Q ss_pred ECCCCCCCCCCCCCCC-CCCC---CCCCCC---C---CCCEEEEE--EEEECCCC-----CCCCCCEEEEEECCEECCCC
Q ss_conf 2345556421368831-1478---877677---7---66407999--75531688-----75678528997082204443
Q 006503 365 PIQQFHIADELKFPKV-ISYR---PQVSAP---L---KDATAETT--IGFIKEAP-----ALSVSGFNVYHKNRLIRPFW 427 (643)
Q Consensus 365 ~V~~~~i~~~L~~~e~-~~Yk---Pq~~~~---v---~~~~v~i~--iGf~kea~-----~~~~~Gi~IY~nnRLI~~~e 427 (643)
++=.++. +++.-.++ ..|+ ...... + .+..+.++ ++.-+.+| .....|+.+|.|+|+|.-.-
T Consensus 232 ~lw~~~~-~~i~~e~y~~fy~~~~~d~~~~l~~ih~~~eg~~~~~gll~~P~~~p~~~~~r~~~~~i~lyvn~v~I~d~~ 310 (559)
T 1y4s_A 232 ALWTRNK-SEITDEEYKEFYKHIAHDFNDPLTWSHNRVEGKQEYTSLLYIPSQAPWDMWNRDHKHGLKLYVQRVFIMDDA 310 (559)
T ss_dssp CGGGSCG-GGCCHHHHHHHHHHHHTCSSCEEEEEEECCCSSSCEEEEEEEESSCCTTCSSSSCCCCEEEEETTEEEEEEE
T ss_pred CCEECCC-CCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEEEEEECCCCCCCHHHHHCCCCCEEEEECCEEEECCH
T ss_conf 2222586-403099999998764132424838998325785699999990786761022021368769999587933612
Q ss_pred C-CCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---------------HHHHHHHHHHHCCCCC
Q ss_conf 3-36888866845999964275698997100211279999999999999---------------9999999888278788
Q 006503 428 K-VTGDGSLKGNGVVGVLEANFIEPTHDKQDFERSTLFVRLESKLKQMT---------------LEYWKAYYHLIGHQLP 491 (643)
Q Consensus 428 k-Vg~~~~~~grgVIGVle~nflePthnKQdFe~t~~y~~l~~~L~e~l---------------~~YW~~~~~~~g~~~~ 491 (643)
+ +... ..+-|-|||+.+-|+++-...-+..+..++.+...|.+.+ ..||..+..-+.+...
T Consensus 311 ~~llP~---~l~fv~gvVDs~dlplNVSRE~lq~~~~l~~I~~~l~kkv~~~l~~l~~~d~e~y~~f~~~f~~~lK~G~~ 387 (559)
T 1y4s_A 311 EQFMPN---YLRFVRGLIDSSDLPLNVSREILQDSTVTRNLRNALTKRVLQMLEKLAKDDAEKYQTFWQQFGLVLKEGPA 387 (559)
T ss_dssp GGGSCG---GGTTCEEEEEESSSCTTCCTTGGGGCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTSTT
T ss_pred HHHCHH---HHHHEEEEECHHHCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC
T ss_conf 304747---57254674076227972175344233899999999999999999998741999999999998677554200
No 3
>2o1u_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, AMP-PNP, GP96; HET: ANP; 2.40A {Canis lupus familiaris} PDB: 2o1v_A* 2o1w_A 2o1t_A
Probab=1.00 E-value=1 Score=141.76 Aligned_cols=106 Identities=26% Similarity=0.327 Sum_probs=79.2
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHH-------------CCCCEEEEEEEECCCCCCCEEEEEECCC
Q ss_conf 853311126434334433420499999987304122562-------------7990699999971689988299997899
Q 006503 87 GSLEHARVHPKFLHSNATSHKWAFGAIAELLDNAVDEVQ-------------NGATFVKVDRVNIMKDNSPALVFIDDGG 153 (643)
Q Consensus 87 ~~l~~~~i~p~fLhsnsTsh~~~f~AIaELIDNAiDA~~-------------~gAt~I~I~i~~~~~~~~~~I~I~DNG~ 153 (643)
.+++.+.-+ ||||.. .+|.|||.||+||.. ..++.+.|.|..+. +...|+|.|||+
T Consensus 33 ~Ll~li~~s---LYsn~e------ifLRELIsNA~DA~dk~r~~~l~~~~~~~~a~~~~I~I~~d~--~~~~I~I~DnGi 101 (666)
T 2o1u_A 33 RMMKLIINS---LYKNKE------IFLRELISNASDALDKIRLISLTDENALAGNEELTVKIKCDK--EKNLLHVTDTGV 101 (666)
T ss_dssp -CCSSSTTT---TSSSCT------THHHHHHHHHHHHHHHHHHHTTSCTTSSSSCCCCCEEEEEET--TTTEEEEEECSC
T ss_pred HHHHHHHHH---CCCCCH------HHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCEEEEEEEC--CCCEEEEEECCC
T ss_conf 999998873---269823------989998756999999888874268021167876379999938--977899998898
Q ss_pred CCCHHHHHHHHH-CCCCCCC---------------CCCCCCCCCCCCCCCCCCCCCEEEEEEEECCC
Q ss_conf 999988989652-1644555---------------89886521231122121359989999420899
Q 006503 154 GMDPESLRKCMS-LGYSTKK---------------ANKTIGQYGNGFKTSTMRLGADVIVFSRATHE 204 (643)
Q Consensus 154 GMs~e~l~~~l~-~G~S~K~---------------~~~~IG~yGiGlKsAs~~lg~~v~V~Sk~~~~ 204 (643)
||+.+++..++. +++|.+. +...||+||+||+++ |.++.+++|.||..++
T Consensus 102 GMt~edl~~~l~tIA~SGtk~f~~kl~~~~~~~~~d~~~IGqFGvGfySa-f~vAdkV~V~Sr~~~~ 167 (666)
T 2o1u_A 102 GMTREELVKNLGTIAKSGTSEFLNKMTEAQEDGQSTSELIGQFGVGFYSA-FLVADKVIVTSKHNND 167 (666)
T ss_dssp CCCHHHHHHHTTC-------------------------------CTTGGG-GGTEEEEEEEEECTTS
T ss_pred CCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCHHHHH-HHHCCEEEEEEEECCC
T ss_conf 98999999997655253628889986400235532055426788078859-8755888999961897
No 4
>1b63_A MUTL; DNA mismatch repair, ATPase; HET: ANP; 1.90A {Escherichia coli K12} SCOP: d.14.1.3 d.122.1.2 PDB: 1nhh_A* 1nhi_A* 1bkn_A 1nhj_A* 1b62_A*
Probab=1.00 E-value=1 Score=130.23 Aligned_cols=273 Identities=17% Similarity=0.229 Sum_probs=143.6
Q ss_pred CCHHHHHHHHHCCCHHHHHCCCCEEEEEEEECCCCCCCEEEEEECCCCCCHHHHHHHHH-CCCCCCC-------CCCCCC
Q ss_conf 04999999873041225627990699999971689988299997899999988989652-1644555-------898865
Q 006503 107 KWAFGAIAELLDNAVDEVQNGATFVKVDRVNIMKDNSPALVFIDDGGGMDPESLRKCMS-LGYSTKK-------ANKTIG 178 (643)
Q Consensus 107 ~~~f~AIaELIDNAiDA~~~gAt~I~I~i~~~~~~~~~~I~I~DNG~GMs~e~l~~~l~-~G~S~K~-------~~~~IG 178 (643)
..+..+|.|||+||+|| +|+.|.|.+.. ++...|.|.|||.||+++++..+|. +++| |. ....+|
T Consensus 23 ~~~~~~v~ELi~NaidA---~a~~I~I~i~~---~~~~~i~V~DnG~Gi~~~~l~~~~~~~~ts-K~~~~~d~~~~~~~G 95 (333)
T 1b63_A 23 ERPASVVKELVENSLDA---GATRIDIDIER---GGAKLIRIRDNGCGIKKDELALALARHATS-KIASLDDLEAIISLG 95 (333)
T ss_dssp SSHHHHHHHHHHHHHHT---TCSEEEEEEEG---GGTSEEEEEECSCCCCGGGHHHHHSTTCCS-SCCSHHHHHTCCSSC
T ss_pred HCHHHHHHHHHHHHHHC---CCCEEEEEEEE---CCCEEEEEEECCCCCCHHHHHHHHHCCCCC-CCCCCCHHHHCCCCC
T ss_conf 47999999999999987---99869999990---994699999848786979999763333526-765433133223567
Q ss_pred CCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEEEEEHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 21231122121359989999420899875225621110002106999807622321589873233212573220011220
Q 006503 179 QYGNGFKTSTMRLGADVIVFSRATHESKSTQSIGLLSYTYLRKTGQDDVIVPMIDFDISGHWAEPIIYSSQDDWSFNLKT 258 (643)
Q Consensus 179 ~yGiGlKsAs~~lg~~v~V~Sk~~~~~~~t~svgllS~tfl~~~~~~di~VPi~d~d~~~~~~~~ii~~~~edw~~~l~~ 258 (643)
.+|+|+. ++....+++|.|++.++. . + +.+...+.. ...
T Consensus 96 ~~G~gl~--si~~vs~l~v~s~~~~~~-~----~-------------------~~~~~~g~~-----------~~~---- 134 (333)
T 1b63_A 96 FRGEALA--SISSVSRLTLTSRTAEQQ-E----A-------------------WQAYAEGRD-----------MNV---- 134 (333)
T ss_dssp CSSCHHH--HHHTTSEEEEEEECTTCS-S----E-------------------EEEEEETTT-----------TEE----
T ss_pred CCCCCHH--HHHCCCCEEEEEECCCCC-E----E-------------------EEEEECCCC-----------CEE----
T ss_conf 6653423--544477399999318984-2----8-------------------999991883-----------057----
Q ss_pred HCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHCCCHHHH
Q ss_conf 00359889967888863005998019999455235688400157898022321022345644541144552201102445
Q 006503 259 ILEWSPFASKSELLQQFEDIGPHGTKVIIYNLWMNDEGVYELSFDDDEEDICLRDEANSGSLKKLPKKVLERQSHISYRI 338 (643)
Q Consensus 259 Il~ySPf~se~eL~~qf~~i~~~GT~IiI~nL~~~~~g~~Eldf~~D~~DI~i~~~~~~~~~~~~~~~~~el~~hl~~~~ 338 (643)
+-.| .-..+||.|.+++|..+..... .| +.. ... +. .++
T Consensus 135 --~~~~------------~~~~~GT~V~v~~Lf~n~P~r~--kf--------lk~---------~~~---e~-~~i---- 173 (333)
T 1b63_A 135 --TVKP------------AAHPVGTTLEVLDLFYNTPARR--KF--------LRT---------EKT---EF-NHI---- 173 (333)
T ss_dssp --EEEE------------ECCCSEEEEEEESTTTTCHHHH--HT--------CCC---------HHH---HH-HHH----
T ss_pred --EEEC------------CCCCCCCEEEEECCCCCCHHHH--HH--------HCC---------HHH---HH-HHH----
T ss_conf --6620------------4689998999933412461666--65--------134---------789---99-999----
Q ss_pred HHHHHHHHHHHCCCCCCCEEEEECCEECCCCCCCC---CCC-CCCCCCCCCCCCCC---C--CCCEEEEEEEEECCCC-C
Q ss_conf 44466566541049999469999694234555642---136-88311478877677---7--6640799975531688-7
Q 006503 339 RYSLRAYASMLYLGKFDNFKIILRGKPIQQFHIAD---ELK-FPKVISYRPQVSAP---L--KDATAETTIGFIKEAP-A 408 (643)
Q Consensus 339 ~ySLRaYlSiLYL~~~~~fkI~LnG~~V~~~~i~~---~L~-~~e~~~YkPq~~~~---v--~~~~v~i~iGf~kea~-~ 408 (643)
..-++.|+ +++.. -+|.++.+|+.+....... .+. ... ..|....... + ....+.+. ||+..+. .
T Consensus 174 ~~~~~~~a-l~~p~--v~~~l~~ng~~~~~~~~~~~~~~~~~~i~-~i~G~~~~~~li~i~~~~~~~~v~-G~i~~p~~~ 248 (333)
T 1b63_A 174 DEIIRRIA-LARFD--VTINLSHNGKIVRQYRAVPEGGQKERRLG-AICGTAFLEQALAIEWQHGDLTLR-GWVADPNHT 248 (333)
T ss_dssp HHHHHHHH-HHCTT--CEEEEEETTEEEEEECCCCTTCCTHHHHH-HHHCHHHHHHEEEEEEEETTEEEE-EEEECGGGC
T ss_pred HHHHHHHH-CCCCC--CEEEEEECCEEEEECCCCCCCCHHHHHHH-HHHCHHHHHHEEEEEECCCCEEEE-EEEECCCCC
T ss_conf 99999985-04998--37999999999885378888720999999-971956373149997047987999-999767556
Q ss_pred C-C-CCCEEEEEECCEECCC----------CCCCCCCCCCCCEEEEEEEC--CCCCC--CCCCCCC--CC-CHHHHHHHH
Q ss_conf 5-6-7852899708220444----------33368888668459999642--75698--9971002--11-279999999
Q 006503 409 L-S-VSGFNVYHKNRLIRPF----------WKVTGDGSLKGNGVVGVLEA--NFIEP--THDKQDF--ER-STLFVRLES 469 (643)
Q Consensus 409 ~-~-~~Gi~IY~nnRLI~~~----------ekVg~~~~~~grgVIGVle~--nfleP--thnKQdF--e~-t~~y~~l~~ 469 (643)
. . ....++|-|||+|... ..+......-. ++=.+++ ..+++ +-+|..+ .+ ..++..+..
T Consensus 249 ~~~~~~~~~~fvNgR~V~~~~l~~ai~~~y~~~l~~~~~P~--~~l~l~~~p~~vDvNvhP~K~ev~f~~~~~v~~~i~~ 326 (333)
T 1b63_A 249 TPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPA--FVLYLEIDPHQVDVNVHPAKHEVRFHQSRLVHDFIYQ 326 (333)
T ss_dssp CTTGGGCEEEEETTEECCCHHHHHHHHHHHHHHSSSCCCCC--EEEEEECCGGGEECTTSTTCCCCEETTHHHHHHHHHH
T ss_pred CCCCCCCEEEEECCEEECCHHHHHHHHHHHHHHCCCCCCCE--EEEEEEECCHHCCCEECCCCCEEEECCHHHHHHHHHH
T ss_conf 67778768999999994678999999999986465889848--9999994803355008888498995788999999999
Q ss_pred HHHHHH
Q ss_conf 999999
Q 006503 470 KLKQMT 475 (643)
Q Consensus 470 ~L~e~l 475 (643)
.+.+.|
T Consensus 327 ~i~~~l 332 (333)
T 1b63_A 327 GVLSVL 332 (333)
T ss_dssp HHHHHT
T ss_pred HHHHHH
T ss_conf 999975
No 5
>2cg9_A ATP-dependent molecular chaperone HSP82; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=1.00 E-value=1 Score=126.19 Aligned_cols=106 Identities=23% Similarity=0.250 Sum_probs=78.7
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHH-------------CCCCEEEEEEEECCCCCCCEEEEEECCC
Q ss_conf 853311126434334433420499999987304122562-------------7990699999971689988299997899
Q 006503 87 GSLEHARVHPKFLHSNATSHKWAFGAIAELLDNAVDEVQ-------------NGATFVKVDRVNIMKDNSPALVFIDDGG 153 (643)
Q Consensus 87 ~~l~~~~i~p~fLhsnsTsh~~~f~AIaELIDNAiDA~~-------------~gAt~I~I~i~~~~~~~~~~I~I~DNG~ 153 (643)
.+++.+.- .||||.. .+|.|||.||+||.. ..+..+.|.|..+. +...|+|.|||+
T Consensus 14 ~Ll~li~~---sLYsnke------ifLRELIsNA~DA~~k~r~~~ltd~~~~~~~~~~~I~I~~d~--~~~~I~I~DnGi 82 (677)
T 2cg9_A 14 QLMSLIIN---TVYSNKE------IFLRELISNASDALDKIRYKSLSDPKQLETEPDLFIRITPKP--EQKVLEIRDSGI 82 (677)
T ss_dssp HHHHHHHH---SCCSCTT------HHHHHHHHHHHHHHHHHHHHTSSCTTTTTTCCCCCEEEEEEG--GGTEEEEEECSC
T ss_pred HHHHHHHH---HCCCCCH------HHHHHHHHCHHHHHHHHHHHHCCCHHHCCCCCCCEEEEEEEC--CCCEEEEEECCC
T ss_conf 99999887---3779815------879888538999999888875269132067877289999938--978899997898
Q ss_pred CCCHHHHHHHHH-CCCCCCC----------CCCCCCCCCCCCCCCCCCCCCEEEEEEEECCC
Q ss_conf 999988989652-1644555----------89886521231122121359989999420899
Q 006503 154 GMDPESLRKCMS-LGYSTKK----------ANKTIGQYGNGFKTSTMRLGADVIVFSRATHE 204 (643)
Q Consensus 154 GMs~e~l~~~l~-~G~S~K~----------~~~~IG~yGiGlKsAs~~lg~~v~V~Sk~~~~ 204 (643)
||+.+++.+++. +++|.+. +...||+||+||++| |..+..++|.||+.++
T Consensus 83 GMt~edl~~~l~tIA~Sgt~~f~~kl~~~~d~~~IGqFGvGFySa-f~vadkV~V~Sk~~~~ 143 (677)
T 2cg9_A 83 GMTKAELINNLGTIAKSGTKAFMEALSAGADVSMIGQFGVGFYSL-FLVADRVQVISKSNDD 143 (677)
T ss_dssp CCCHHHHHGGGSSSSSCTTHHHHSCCCSSCCCCCCCCTTCTTGGG-GGTEEEEEEEEECTTS
T ss_pred CCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHCCCCCCHHHHH-HHCCCEEEEEECCCCC
T ss_conf 989999999987670356277888631224344417877126877-5157678999726998
No 6
>1yc1_A HSP 86, heat shock protein HSP 90-alpha; cell-cycle, cancer, drug design, cell cycle; HET: 4BC; 1.70A {Homo sapiens} SCOP: d.122.1.1 PDB: 1yc3_A* 1yc4_A*
Probab=1.00 E-value=1 Score=119.97 Aligned_cols=130 Identities=18% Similarity=0.273 Sum_probs=88.9
Q ss_pred CCHHHHHHHCCCCCCCCC---CCCCCC-CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHC-----------
Q ss_conf 901466530366565675---445787-68533111264343344334204999999873041225627-----------
Q 006503 62 APESRSFWKAGTYAANIT---IKSTPV-QGSLEHARVHPKFLHSNATSHKWAFGAIAELLDNAVDEVQN----------- 126 (643)
Q Consensus 62 ~~~~~~fw~ag~~~~~~~---~~~~~~-~~~l~~~~i~p~fLhsnsTsh~~~f~AIaELIDNAiDA~~~----------- 126 (643)
...-|.+|.++.-..... ..+.+. ..+++.+.-. |+++.. .+|.|||+||+||...
T Consensus 27 ~~~~~~~~~~~~~~~~~~~e~~~F~~ei~~Ll~ll~~~---lys~~~------~~lrELI~NA~DA~ak~r~~~l~~~~~ 97 (264)
T 1yc1_A 27 DDDDKDRWGSDQPMEEEEVETFAFQAEIAQLMSLIINT---FYSNKE------IFLRELISNSSDALDKIRYETLTDPSK 97 (264)
T ss_dssp ----------------CCEEEEECCHHHHHHHHHHHHC---CCSCTT------HHHHHHHHHHHHHHHHHHHHHHHCGGG
T ss_pred HHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHHHH---CCCCHH------HHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 77778864478855543324687358899999999886---028888------999999878998866355442257311
Q ss_pred --CCCEEEEEEEECCCCCCCEEEEEECCCCCCHHHHHHHH-HCCCCCCC----------CCCCCCCCCCCCCCCCCCCCC
Q ss_conf --99069999997168998829999789999998898965-21644555----------898865212311221213599
Q 006503 127 --GATFVKVDRVNIMKDNSPALVFIDDGGGMDPESLRKCM-SLGYSTKK----------ANKTIGQYGNGFKTSTMRLGA 193 (643)
Q Consensus 127 --gAt~I~I~i~~~~~~~~~~I~I~DNG~GMs~e~l~~~l-~~G~S~K~----------~~~~IG~yGiGlKsAs~~lg~ 193 (643)
..+.+.|.+..+ .+...|.|.|||.||+++++..++ ++|+|.+. +...||+||+||++++ .++.
T Consensus 98 ~~~~~~i~I~i~~d--~~~~~I~I~DnG~GMs~edL~~~l~~ia~S~~~~f~~~l~~~~d~~~iG~fGiGf~S~f-~va~ 174 (264)
T 1yc1_A 98 LDSGKELHINLIPN--KQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAY-LVAE 174 (264)
T ss_dssp GGGCCCCCEEEEEE--TTTTEEEEEECSCCCCHHHHHHHHHSCTTSCHHHHHHHHHTTCCGGGGGGGTCGGGGHH-HHEE
T ss_pred CCCCCEEEEEEEEC--CCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHCCCCCCCCCCCC-CCCC
T ss_conf 37897389999987--98469999988868799999999876612343556666302345223178777726202-4778
Q ss_pred EEEEEEEECC
Q ss_conf 8999942089
Q 006503 194 DVIVFSRATH 203 (643)
Q Consensus 194 ~v~V~Sk~~~ 203 (643)
.+.|.|+..+
T Consensus 175 ~v~V~Sr~~~ 184 (264)
T 1yc1_A 175 KVTVITKHND 184 (264)
T ss_dssp EEEEEEECTT
T ss_pred EEEEEEECCC
T ss_conf 7899970699
No 7
>3peh_A Endoplasmin homolog; structural genomics, structural genomics consortium, SGC, HE protein, chaperone, ATP binding; HET: IBD; 2.75A {Plasmodium falciparum 3D7} PDB: 3pej_A*
Probab=1.00 E-value=1 Score=119.84 Aligned_cols=106 Identities=21% Similarity=0.307 Sum_probs=79.7
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHC-------------CCCEEEEEEEECCCCCCCEEEEEECCC
Q ss_conf 8533111264343344334204999999873041225627-------------990699999971689988299997899
Q 006503 87 GSLEHARVHPKFLHSNATSHKWAFGAIAELLDNAVDEVQN-------------GATFVKVDRVNIMKDNSPALVFIDDGG 153 (643)
Q Consensus 87 ~~l~~~~i~p~fLhsnsTsh~~~f~AIaELIDNAiDA~~~-------------gAt~I~I~i~~~~~~~~~~I~I~DNG~ 153 (643)
.+++.+.-+ ||||.. .+|.|||.||.||... ....+.|.|..+. ....|+|.|||.
T Consensus 34 ~Ll~ll~~~---lYsn~~------ifLRELIsNA~DA~~k~r~~~l~d~~~~~~~~~l~I~I~~d~--~~~tLtI~DNGi 102 (281)
T 3peh_A 34 RLMDIIVNS---LYTQKE------VFLRELISNAADALEKIRFLSLSDESVLGEEKKLEIRISANK--EKNILSITDTGI 102 (281)
T ss_dssp HHHHHHHHH---HTTCGG------GHHHHHHHHHHHHHHHHHHHHTTCGGGGTTCCCCCEEEEEET--TTTEEEEEECSC
T ss_pred HHHHHHHHH---CCCCHH------HHHHHHHHCHHHHHHHHHHHHCCCCHHCCCCCCEEEEEEECC--CCCEEEEEECCC
T ss_conf 999999886---148809------999999868687999999885278021168884499999828--976799994898
Q ss_pred CCCHHHHHHHHH-CCCCCC-----------CCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCC
Q ss_conf 999988989652-164455-----------589886521231122121359989999420899
Q 006503 154 GMDPESLRKCMS-LGYSTK-----------KANKTIGQYGNGFKTSTMRLGADVIVFSRATHE 204 (643)
Q Consensus 154 GMs~e~l~~~l~-~G~S~K-----------~~~~~IG~yGiGlKsAs~~lg~~v~V~Sk~~~~ 204 (643)
||+++++...+. +|+|.+ .+...||+||+||+++ |.++..+.|.|+..++
T Consensus 103 GMt~edL~~~LgtIa~Sgtk~f~e~l~~~~~d~~~IGqFGVGFySa-f~vadkV~V~Sk~~~~ 164 (281)
T 3peh_A 103 GMTKVDLINNLGTIAKSGTSNFLEAISKSGGDMSLIGQFGVGFYSA-FLVADKVIVYTKNNDD 164 (281)
T ss_dssp CCCHHHHHHHHHHHHHSCHHHHHHHHHHTTCCSTTTTTTTCGGGGG-GGTEEEEEEEEECTTS
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHH-CCCCCEEEEEEECCCC
T ss_conf 9899999999999876765637776420245512004557320100-0016879999940788
No 8
>3o0i_A HSP90AA1 protein; HSP90 heat-shock proteins, chaperone-inhibitor complex; HET: P54; 1.47A {Homo sapiens} PDB: 2fwz_A* 2fwy_A* 2h55_A*
Probab=1.00 E-value=1 Score=119.51 Aligned_cols=106 Identities=21% Similarity=0.318 Sum_probs=80.5
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHC-------------CCCEEEEEEEECCCCCCCEEEEEECC
Q ss_conf 68533111264343344334204999999873041225627-------------99069999997168998829999789
Q 006503 86 QGSLEHARVHPKFLHSNATSHKWAFGAIAELLDNAVDEVQN-------------GATFVKVDRVNIMKDNSPALVFIDDG 152 (643)
Q Consensus 86 ~~~l~~~~i~p~fLhsnsTsh~~~f~AIaELIDNAiDA~~~-------------gAt~I~I~i~~~~~~~~~~I~I~DNG 152 (643)
..+++.+.-+ ||||.. .+|.|||.||+||... ....+.|.+..+ .+...|.|.|||
T Consensus 47 ~~Ll~ll~~~---lYs~~~------iflRELIsNA~DA~~k~r~~~l~~~~~~~~~~~~~I~I~~d--~~~~~I~I~DnG 115 (256)
T 3o0i_A 47 AQLMSLIINT---FYSNKE------IFLRELISNSSDALDKIRYESLTDPSKLDSGKELHINLIPN--KQDRTLTIVDTG 115 (256)
T ss_dssp HHHHHHHHHS---CCSCTT------HHHHHHHHHHHHHHHHHHHHHHHCGGGGTTCCCCCEEEEEE--TTTTEEEEEECS
T ss_pred HHHHHHHHHH---CCCCCH------HHHHHHHHCHHHHHHHHHHHHCCCCHHCCCCCCEEEEEEEC--CCCEEEEEECCC
T ss_conf 9999999986---158809------99999986869899999888605812105788559999982--991079996389
Q ss_pred CCCCHHHHHHHH-HCCCCCCC----------CCCCCCCCCCCCCCCCCCCCCEEEEEEEECC
Q ss_conf 999998898965-21644555----------8988652123112212135998999942089
Q 006503 153 GGMDPESLRKCM-SLGYSTKK----------ANKTIGQYGNGFKTSTMRLGADVIVFSRATH 203 (643)
Q Consensus 153 ~GMs~e~l~~~l-~~G~S~K~----------~~~~IG~yGiGlKsAs~~lg~~v~V~Sk~~~ 203 (643)
.||+++++..++ ++++|.+. +...||+||+||+++ +.++.++.|.||..+
T Consensus 116 ~GMt~edl~~~l~~ia~S~~~~f~~~L~~~~~~~~iG~fG~Gf~S~-f~Vadkv~V~Sr~~~ 176 (256)
T 3o0i_A 116 IGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSA-YLVAEKVTVITKHND 176 (256)
T ss_dssp CCCCHHHHHTHHHHHHHHHHHHHHHHHHTTCCGGGGGGGTCGGGGG-GGTEEEEEEEEECTT
T ss_pred CCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHH-HCCCCEEEEEECCCC
T ss_conf 8969999999987551654400556630257866558776167886-465886999975799
No 9
>1qy5_A Endoplasmin; GRP94, NECA, HSP90, chaperone; HET: NEC; 1.75A {Canis lupus familiaris} SCOP: d.122.1.1 PDB: 1qy8_A* 1qye_A* 1u0y_A* 1yt2_A*
Probab=1.00 E-value=1 Score=119.24 Aligned_cols=98 Identities=29% Similarity=0.374 Sum_probs=74.9
Q ss_pred CCCCCCCCCCCHHHHHHHHHCCCHHHHH-------------CCCCEEEEEEEECCCCCCCEEEEEECCCCCCHHHHHHHH
Q ss_conf 4334433420499999987304122562-------------799069999997168998829999789999998898965
Q 006503 98 FLHSNATSHKWAFGAIAELLDNAVDEVQ-------------NGATFVKVDRVNIMKDNSPALVFIDDGGGMDPESLRKCM 164 (643)
Q Consensus 98 fLhsnsTsh~~~f~AIaELIDNAiDA~~-------------~gAt~I~I~i~~~~~~~~~~I~I~DNG~GMs~e~l~~~l 164 (643)
.||||.. .+|.|||.||+||.. ...+.+.|.+..+ .+...|.|.|||.||+.+++.+.|
T Consensus 24 ~lYsn~e------ifLrELIsNA~DA~~k~r~~~l~~~~~~~~~~~~~I~i~~d--~~~~~l~I~DnGiGMt~edl~~~l 95 (269)
T 1qy5_A 24 SLYKNKE------IFLRELISNASDALDKIRLISLTDENALAGNEELTVKIKCD--KEKNLLHVTDTGVGMTREELVKNL 95 (269)
T ss_dssp HHTTCTT------HHHHHHHHHHHHHHHHHHHHHHHCTTTTTTCCCCCEEEEEE--TTTTEEEEEECSCCCCHHHHHHHH
T ss_pred HCCCCCH------HHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCEEEEEEEC--CCCEEEEEEECCCCCCHHHHHHHH
T ss_conf 4559805------99999999999988744555315811126897169999982--891399999788887999999886
Q ss_pred -HCCCCCC---------------CCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCC
Q ss_conf -2164455---------------589886521231122121359989999420899
Q 006503 165 -SLGYSTK---------------KANKTIGQYGNGFKTSTMRLGADVIVFSRATHE 204 (643)
Q Consensus 165 -~~G~S~K---------------~~~~~IG~yGiGlKsAs~~lg~~v~V~Sk~~~~ 204 (643)
.+|+|.+ .+...||+||+||+++ |.++..+.|.|+..++
T Consensus 96 ~tia~Sgtk~F~~kl~~~~~~~~~d~~~IG~fGvGfySa-f~va~~v~V~Sk~~~~ 150 (269)
T 1qy5_A 96 GTIAKSGTSEFLNKMTEAQEDGQSTSELIGQFGVGFYSA-FLVADKVIVTSKHNND 150 (269)
T ss_dssp HSCCSHHHHHHHHHHHHHHHHTCCCHHHHHHTTCGGGGG-GGTEEEEEEEEECTTS
T ss_pred HHHCCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHH-HHCCCEEEEEEEECCC
T ss_conf 444054538787764200134434412227766008888-6426669999995588
No 10
>2gqp_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, ligand, NECA, NPCA, adenosine; HET: PA7 PG4 1PE; 1.50A {Canis lupus familiaris} SCOP: d.122.1.1 PDB: 1tc0_A* 1tbw_A* 1u0z_A* 1u2o_A* 1ysz_A* 1yt0_A* 1yt1_A* 2exl_A* 2fyp_A* 2gfd_A* 1tc6_A* 2h8m_A* 2hch_A* 2hg1_A* 3o2f_A* 2esa_A*
Probab=1.00 E-value=1 Score=118.57 Aligned_cols=96 Identities=29% Similarity=0.374 Sum_probs=72.9
Q ss_pred CCCCCCCCCCHHHHHHHHHCCCHHHHHC-------------CCCEEEEEEEECCCCCCCEEEEEECCCCCCHHHHHHHHH
Q ss_conf 3344334204999999873041225627-------------990699999971689988299997899999988989652
Q 006503 99 LHSNATSHKWAFGAIAELLDNAVDEVQN-------------GATFVKVDRVNIMKDNSPALVFIDDGGGMDPESLRKCMS 165 (643)
Q Consensus 99 LhsnsTsh~~~f~AIaELIDNAiDA~~~-------------gAt~I~I~i~~~~~~~~~~I~I~DNG~GMs~e~l~~~l~ 165 (643)
||++.. .+|.|||+||+||... ..+.+.|.+..+. +...|.|.|||.||+++++..+|.
T Consensus 29 lys~~~------~~lrELI~NA~DA~ak~~~~~~~~~~~~~~~~~~~I~i~~d~--~~~~i~I~DnG~GMt~edl~~~l~ 100 (236)
T 2gqp_A 29 LYKNKE------IFLRELISNASDALDKIRLISLTDENALAGNEELTVKIKCDK--EKNLLHVTDTGVGMTREELVKNLG 100 (236)
T ss_dssp TTTCTT------HHHHHHHHHHHHHHHHHHHHHHHCTTTTTTCCCCCEEEEEET--TTTEEEEEECSCCCCHHHHHHHHH
T ss_pred HCCCCH------HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECC--CCCEEEEEECCCCCCHHHHHHHHH
T ss_conf 139926------999999984987524022002467210367883599999908--987899998895879999999976
Q ss_pred -CCCCCCC---------------CCCCCCCCCCCCCCCCCCCCCEEEEEEEECC
Q ss_conf -1644555---------------8988652123112212135998999942089
Q 006503 166 -LGYSTKK---------------ANKTIGQYGNGFKTSTMRLGADVIVFSRATH 203 (643)
Q Consensus 166 -~G~S~K~---------------~~~~IG~yGiGlKsAs~~lg~~v~V~Sk~~~ 203 (643)
+|+|.+. +...||+||+||++ ++.++..+.|.|+..+
T Consensus 101 ~ia~Sg~~~f~~kl~~~~~~~~~d~~~iG~fGiG~~S-~f~va~~v~V~Sr~~~ 153 (236)
T 2gqp_A 101 TIAKSGTSEFLNKMTEAQEDGQSTSELIGQFGVGFYS-AFLVADKVIVTSKHNN 153 (236)
T ss_dssp CC---------------------CHHHHHHTTCGGGG-GGGTEEEEEEEEECTT
T ss_pred HHCCCCCHHHHHHHHCCCCCCCCCHHHCCCCCCCHHH-HHHCCCEEEEEEECCC
T ss_conf 5524363767877530134454332233788852513-8535887999980799
Done!