Query 006506
Match_columns 643
No_of_seqs 275 out of 1313
Neff 5.1
Searched_HMMs 13730
Date Tue Mar 26 18:09:06 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/006506.a3m -d /local_scratch/syshi/scop70.hhm -v 0 -o /local_scratch/syshi/H1_2135-2139//hhsearch_scop/006506hhsearch_scop
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ga8a_ c.68.1.4 (A:) Galactos 100.0 1.3E-43 0 313.3 18.7 252 346-634 1-273 (282)
2 d1ll2a_ c.68.1.14 (A:) Glycoge 99.9 5.9E-27 4.3E-31 199.4 11.1 234 348-638 7-263 (263)
3 d1fo8a_ c.68.1.10 (A:) N-acety 87.2 0.69 5E-05 21.3 11.9 119 344-488 2-122 (343)
4 d1o7qa_ c.68.1.9 (A:) alpha-1, 50.9 5 0.00037 15.3 14.9 214 343-611 45-278 (287)
5 d1lzia_ c.68.1.9 (A:) Glycosyl 41.9 6.9 0.0005 14.4 13.2 208 343-605 51-281 (283)
6 d1s4na_ c.68.1.16 (A:) Glycoli 13.2 23 0.0017 10.8 13.9 215 347-579 21-279 (339)
7 d2axtm1 f.23.35.1 (M:1-36) Pho 8.0 39 0.0028 9.3 2.1 14 34-47 12-25 (36)
8 d2py5a2 e.8.1.1 (A:188-575) ph 5.9 56 0.0041 8.2 3.5 48 450-497 245-295 (388)
9 d1iapa_ a.91.1.1 (A:) p115RhoG 5.9 23 0.0016 10.9 -2.1 35 359-394 17-54 (190)
10 d2bi6h1 g.3.12.1 (H:8-31) Brom 5.2 67 0.0049 7.7 0.6 12 172-183 11-22 (26)
No 1
>d1ga8a_ c.68.1.4 (A:) Galactosyltransferase LgtC {Neisseria meningitidis [TaxId: 487]}
Probab=100.00 E-value=1.3e-43 Score=313.28 Aligned_cols=252 Identities=19% Similarity=0.248 Sum_probs=198.0
Q ss_pred EEEEE-EECCCHHH-HHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHH
Q ss_conf 18999-81996146-99999998730999971999994998988899999733688814999973442124541678875
Q 006506 346 HHYVI-FSTNVLAS-SVVINSTVLCARESKNQVFHVLTDGQNYFAMKLWFFRNTFKEATVQVLNIEQLNLESHDKAILIH 423 (643)
Q Consensus 346 iHIvi-~sDNvLaa-sVvInSii~Nsk~p~~ivFHIItD~is~~~mk~wF~~n~~~~a~I~Vi~ie~~~~~~~~~~~l~~ 423 (643)
+|||+ +++|++.. +|+++|++.++++ .+++|||++++++.+..+.+...-...+..+.++.++...+..
T Consensus 1 mnIv~~~D~nY~~~~~~~i~SL~~~~~~-~~~~~~il~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~-------- 71 (282)
T d1ga8a_ 1 MDIVFAADDNYAAYLCVAAKSVEAAHPD-TEIRFHVLDAGISEANRAAVAANLRGGGGNIRFIDVNPEDFAG-------- 71 (282)
T ss_dssp CEEEEEECGGGHHHHHHHHHHHHHHCTT-SCCEEEEEESSCCHHHHHHHHHTSGGGTTTEEEEECCGGGGTT--------
T ss_pred CEEEEECCHHHHHHHHHHHHHHHHHCCC-CCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHCC--------
T ss_conf 9899987887999999999999998869-9879999769999999999999998749869999779057515--------
Q ss_pred HCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCEEEECCCHHHHCCCCCCCEEEEECCCCC
Q ss_conf 03541001102357999865545423386778865321302578299981456680791678711489971254213422
Q 006506 424 MFLPVEYRVSLLSVDGPSIHSKMQYISVFSHLHYLLPEIFQSLTKVVVLDDDVVVQKDLSALWDINMGGKVNGAVQSCSV 503 (643)
Q Consensus 424 l~~~~~fr~~f~~~~~p~~~~r~~ylS~lny~Rl~LPeLlP~ldKVLYLD~DVIVq~DLseLw~iDL~gkviaAVedc~~ 503 (643)
.+. ..+++|.++|+||++|++||+++||||||+|+||.+||++||++|++++.+||+.++..
T Consensus 72 ---------------~~~---~~~~~s~~~y~Rl~l~~~lp~~~kiiyLD~D~iv~~dl~~L~~~~~~~~~~aa~~d~~~ 133 (282)
T d1ga8a_ 72 ---------------FPL---NIRHISITTYARLKLGEYIADCDKVLYLDIDVLVRDSLTPLWDTDLGDNWLGASIDLFV 133 (282)
T ss_dssp ---------------SCC---CCTTCCGGGGGGGGHHHHCCSCSCEEEECSSEEECSCCHHHHTCCCTTCSEEEEECHHH
T ss_pred ---------------CCC---CCCCCCHHHHHHHHHHHHCCCCCEEEEECCCEEEECCHHHHHHCCCCCCEEEEEHHHHH
T ss_conf ---------------632---24545799999998765487655589941888985360788724245660032113443
Q ss_pred CHHHHHHHHCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHCC-----CCCCCCCCCCCCCHHHHCCCCEEEE
Q ss_conf 23455432125999999875324407760378878659999999999716-----9941101100100021026846880
Q 006506 504 SLGQLKSYLGENSYDKNSCAWMSGLNIVDLARWRELDLTKTYQRLVREVS-----MGEESKEAVALRGSLLTFQDLVYAL 578 (643)
Q Consensus 504 ~~~~~~~yl~~~~~~~~~cyfNSGVlLiDL~kWRk~nitek~~~~lq~~~-----~DQdllnlGsLP~~ll~F~g~i~~L 578 (643)
.. ...+....++.+..+||||||||+|+++||+.++++++++++++.. .||+++| .+|.|++..|
T Consensus 134 ~~--~~~~~~~~~~~~~~~yfNsGVml~n~~~~r~~~~~~~~~~~~~~~~~~~~~~DQd~LN--------~~f~~~~~~L 203 (282)
T d1ga8a_ 134 ER--QEGYKQKIGMADGEYYFNAGVLLINLKKWRRHDIFKMSSEWVEQYKDVMQYQDQDILN--------GLFKGGVCYA 203 (282)
T ss_dssp HT--STTHHHHTTCCTTSCCEEEEEEEECHHHHTTSCHHHHHHHHHHHHTTTCSSTHHHHHH--------HHHTTSEEEE
T ss_pred HH--HHHHHHHHCCCCCCCEEECCEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH--------HHHCCCEEEC
T ss_conf 10--1326877078887751234303545044221327999999999643574267265787--------8744777767
Q ss_pred CCCCCCCCCCCCCCC--------C------HHHHCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCH
Q ss_conf 784343577888988--------8------7541698699824899985349953029999999820801
Q 006506 579 DGVWALSGLGHDYGL--------N------IEAIKKAAVLHYNGNMKPWLELGIPRYKKFWKKFLNQEDQ 634 (643)
Q Consensus 579 d~~WN~~gLGyd~~i--------~------~e~ie~a~IIHY~G~~KPW~~~~~~~yr~lW~kYl~~s~~ 634 (643)
|.+||++..++.... . .+...+++||||+|+.|||...+.+.+++.|++|+.....
T Consensus 204 ~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iiHf~G~~KPW~~~~~~~~~~~~~~~~~~~~~ 273 (282)
T d1ga8a_ 204 NSRFNFMPTNYAFMANWFASRHTDPLYRDRTNTVMPVAVSHYCGPAKPWHRDCTAWGAERFTELAGSLTT 273 (282)
T ss_dssp CGGGSBCHHHHHTCC----CSCCCHHHHHHHSCCSSCSEEECCSSCCTTSTTCCSTTTHHHHHHHTTCSC
T ss_pred CHHHEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHC
T ss_conf 8788026544454211012235115566554024798899208789899889887268999999976531
No 2
>d1ll2a_ c.68.1.14 (A:) Glycogenin {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=99.94 E-value=5.9e-27 Score=199.38 Aligned_cols=234 Identities=15% Similarity=0.084 Sum_probs=153.5
Q ss_pred EEEE-ECCCHH-HHHHHHHHHHHCCCCCCEEEEE-EECCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHH
Q ss_conf 9998-199614-6999999987309999719999-949989888999997336888149999734421245416788750
Q 006506 348 YVIF-STNVLA-SSVVINSTVLCARESKNQVFHV-LTDGQNYFAMKLWFFRNTFKEATVQVLNIEQLNLESHDKAILIHM 424 (643)
Q Consensus 348 Ivi~-sDNvLa-asVvInSii~Nsk~p~~ivFHI-ItD~is~~~mk~wF~~n~~~~a~I~Vi~ie~~~~~~~~~~~l~~l 424 (643)
|.++ +||++. +.|++.|+.+++.. +.++| ++++++.+..+.+.... . .++.++....... ...
T Consensus 7 vt~~t~d~Yl~~a~vl~~SL~~~~~~---~~~vvl~~~~i~~~~~~~L~~~~----~--~~~~v~~i~~~~~--~~~--- 72 (263)
T d1ll2a_ 7 VTLTTNDAYAKGALVLGSSLKQHRTS---RRLAVLTTPQVSDTMRKALEIVF----D--EVITVDILDSGDS--AHL--- 72 (263)
T ss_dssp EEEESSHHHHHHHHHHHHHHHHTTCC---SEEEEEECTTSCHHHHHHHHHHC----S--EEEECCTTSTTST--THH---
T ss_pred EEEEECHHHHHHHHHHHHHHHHHCCC---CCEEEEECCCCCHHHHHHHHHHC----C--CCEEEEEECCCCH--HHH---
T ss_conf 99976987999999999999997899---99999987999999999999728----8--4236776328514--420---
Q ss_pred CCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCEEEECCCHHHHCCCCCCCEEEEECCCCCC
Q ss_conf 35410011023579998655454233867788653213025782999814566807916787114899712542134222
Q 006506 425 FLPVEYRVSLLSVDGPSIHSKMQYISVFSHLHYLLPEIFQSLTKVVVLDDDVVVQKDLSALWDINMGGKVNGAVQSCSVS 504 (643)
Q Consensus 425 ~~~~~fr~~f~~~~~p~~~~r~~ylS~lny~Rl~LPeLlP~ldKVLYLD~DVIVq~DLseLw~iDL~gkviaAVedc~~~ 504 (643)
.. .....+..+|+||+++++ ++++||||||+|+||.+||++||+.+ ..+|+.++..
T Consensus 73 -----------------~~-~~~~~~~~ty~Kl~i~~l-~~ydkvlYLDaD~lv~~~id~Lf~~~----~~~a~~~~~~- 128 (263)
T d1ll2a_ 73 -----------------TL-MKRPELGVTLTKLHCWSL-TQYSKCVFMDADTLVLANIDDLFERE----ELSAAPDPGW- 128 (263)
T ss_dssp -----------------HH-HHCGGGHHHHHHGGGGGC-TTCSEEEEECTTEEECSCCGGGGGSC----SSEEEECSSS-
T ss_pred -----------------HH-HCCCCCHHHHHHHHHHHH-CCCCEEEEECCCEEEECCHHHHHCCC----CCCEECCCCC-
T ss_conf -----------------02-116652032599998663-04454799579988866878873687----4102146777-
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCEEEECCCCCC
Q ss_conf 34554321259999998753244077603788786599999999997169941101100100021026846880784343
Q 006506 505 LGQLKSYLGENSYDKNSCAWMSGLNIVDLARWRELDLTKTYQRLVREVSMGEESKEAVALRGSLLTFQDLVYALDGVWAL 584 (643)
Q Consensus 505 ~~~~~~yl~~~~~~~~~cyfNSGVlLiDL~kWRk~nitek~~~~lq~~~~DQdllnlGsLP~~ll~F~g~i~~Ld~~WN~ 584 (643)
..|||+|||++++++||..++.+...........||+.+|..-+ +..+.+.+..|+..||+
T Consensus 129 ----------------~~~~nsGv~l~~p~~~~~~~i~~~~~~~~~~~~~dq~~ln~~~~---~~~~~~~~~~l~~~~~~ 189 (263)
T d1ll2a_ 129 ----------------PDCFNSGVFVYQPSVETYNQLLHVASEQGSFDGGDQGLLNTFFN---SWATTDIRKHLPFIYNL 189 (263)
T ss_dssp ----------------TTSEEEEEEEECCCHHHHHHHHHHHHHTCCTTSSHHHHHHHHTT---TTTTSCGGGBCCGGGSE
T ss_pred ----------------CCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH---HHHCCCCCCCCCHHHHH
T ss_conf ----------------44456776787740889999999999647888345558999987---40125860005778752
Q ss_pred CCCC-CCCCC-CHHHHCCCEEEECCCCCCCCCCCC-----------------CCCHHHHHHHHHHHC-CHHHCC
Q ss_conf 5778-88988-875416986998248999853499-----------------530299999998208-010101
Q 006506 585 SGLG-HDYGL-NIEAIKKAAVLHYNGNMKPWLELG-----------------IPRYKKFWKKFLNQE-DQLLSE 638 (643)
Q Consensus 585 ~gLG-yd~~i-~~e~ie~a~IIHY~G~~KPW~~~~-----------------~~~yr~lW~kYl~~s-~~fl~~ 638 (643)
...+ +.... ......+++||||+|..|||.... ...+.+.||++++.. .||+||
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~iIHf~g~~KPW~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ww~~~~~~~~~~~~~ 263 (263)
T d1ll2a_ 190 SSISIYSYLPAFKAFGANAKVVHFLGQTKPWNYTYDTKTKSVRSEGHDPTMTHPQFLNVWWDIFTTSVVPLLQQ 263 (263)
T ss_dssp ETTHHHHTHHHHHHHGGGCSEEECCSSCCGGGSCEETTTTEEC--------CCHHHHHHHHHHHHHTHHHHHTC
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 12565542476774038729998388998987889998543443111011017999999999985252237879
No 3
>d1fo8a_ c.68.1.10 (A:) N-acetylglucosaminyltransferase I {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=87.15 E-value=0.69 Score=21.26 Aligned_cols=119 Identities=15% Similarity=0.213 Sum_probs=74.5
Q ss_pred CCEEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHH
Q ss_conf 92189998199614699999998730999971999994998988899999733688814999973442124541678875
Q 006506 344 SLHHYVIFSTNVLASSVVINSTVLCARESKNQVFHVLTDGQNYFAMKLWFFRNTFKEATVQVLNIEQLNLESHDKAILIH 423 (643)
Q Consensus 344 ~~iHIvi~sDNvLaasVvInSii~Nsk~p~~ivFHIItD~is~~~mk~wF~~n~~~~a~I~Vi~ie~~~~~~~~~~~l~~ 423 (643)
+.+.|+++.-|-....-++.|++++....+...++|..|+-..+..+.. +.+... +..+. +..+....
T Consensus 2 ~viPVlv~a~NRP~l~r~LesLlk~~p~~~~~~I~Vs~DG~~~~~~~~v---~~~~~~-v~~I~--~~~~~~~~------ 69 (343)
T d1fo8a_ 2 AVIPILVIACDRSTVRRCLDKLLHYRPSAELFPIIVSQDCGHEETAQVI---ASYGSA-VTHIR--QPDLSNIA------ 69 (343)
T ss_dssp CCCCEEEEESSCTTHHHHHHHHHHHCSCTTTSCEEEEECTTCHHHHHHH---HTTGGG-SEEEE--CSCCCCCC------
T ss_pred CCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHH---HHHHHH-HHHHC--CCCCCCCE------
T ss_conf 8304899975778899999999842755668538999649954579999---998889-88730--77545635------
Q ss_pred HCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC--CCEEEEEECCEEEECCCHHHHCC
Q ss_conf 035410011023579998655454233867788653213025--78299981456680791678711
Q 006506 424 MFLPVEYRVSLLSVDGPSIHSKMQYISVFSHLHYLLPEIFQS--LTKVVVLDDDVVVQKDLSALWDI 488 (643)
Q Consensus 424 l~~~~~fr~~f~~~~~p~~~~r~~ylS~lny~Rl~LPeLlP~--ldKVLYLD~DVIVq~DLseLw~i 488 (643)
..+....+..+.....|++.-|-.+|.. ++++|.|.+|+++-.|.-+.++.
T Consensus 70 --------------~~~~~~k~~~n~giarhy~~AL~~~F~~~~~~~~IiLEDDl~~spdFf~y~~~ 122 (343)
T d1fo8a_ 70 --------------VQPDHRKFQGYYKIARHYRWALGQIFHNFNYPAAVVVEDDLEVAPDFFEYFQA 122 (343)
T ss_dssp --------------CCTTCGGGHHHHHHHHHHHHHHHHHHTTSCCSEEEEEETTEEECTTHHHHHHH
T ss_pred --------------ECCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEHHHHHHHHH
T ss_conf --------------42113203311678889999999874115776499992575040779999999
No 4
>d1o7qa_ c.68.1.9 (A:) alpha-1,3-galactosyltransferase catalytic domain {Cow (Bos taurus) [TaxId: 9913]}
Probab=50.92 E-value=5 Score=15.35 Aligned_cols=214 Identities=9% Similarity=0.086 Sum_probs=110.5
Q ss_pred CCCEEEEEEEC-CCHH-HH-HHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCCCC-CCCCHH
Q ss_conf 99218999819-9614-69-99999987309999719999949989888999997336888149999734421-245416
Q 006506 343 PSLHHYVIFST-NVLA-SS-VVINSTVLCARESKNQVFHVLTDGQNYFAMKLWFFRNTFKEATVQVLNIEQLN-LESHDK 418 (643)
Q Consensus 343 ~~~iHIvi~sD-NvLa-as-VvInSii~Nsk~p~~ivFHIItD~is~~~mk~wF~~n~~~~a~I~Vi~ie~~~-~~~~~~ 418 (643)
+-.+-+++|.- .|+. -. --+.|+=++=-...++.|||+||+-..-. + .+..+...+.|..+.... |- .
T Consensus 45 ~~tIgl~vfAtgkY~~~Fl~~FleSaEk~Fm~g~~v~yyVFTD~~~~~P---~--i~l~~~r~~~v~~v~~~~~Wp---~ 116 (287)
T d1o7qa_ 45 KITVGLTVFAVGRYIEHYLEEFLTSANKHFMVGHPVIFYIMVDDVSRMP---L--IELGPLRSFKVFKIKPEKRWQ---D 116 (287)
T ss_dssp TCCEEEEEEECTTHHHHHHHHHHHHHHHHBSTTSCEEEEEEESCGGGCC---C--CCCCTTEEEEEEECCCCSSHH---H
T ss_pred CCEEEEEEEEECHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCC---C--CCCCCCCCEEEEECCCCCCCC---H
T ss_conf 9669999998373389999999999998568997479999979964577---6--556776605899724667884---2
Q ss_pred HHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCEEEECCCHHHHCCCCCCCEEEEE
Q ss_conf 78875035410011023579998655454233867788653213025782999814566807916787114899712542
Q 006506 419 AILIHMFLPVEYRVSLLSVDGPSIHSKMQYISVFSHLHYLLPEIFQSLTKVVVLDDDVVVQKDLSALWDINMGGKVNGAV 498 (643)
Q Consensus 419 ~~l~~l~~~~~fr~~f~~~~~p~~~~r~~ylS~lny~Rl~LPeLlP~ldKVLYLD~DVIVq~DLseLw~iDL~gkviaAV 498 (643)
..|. |.+ +...+..-+++.++|-++|+|+|+++++.+.+= .|+ ..+|..
T Consensus 117 iTL~----------------------Rm~-----~i~~~i~~~~~~e~Dylf~~DaDm~f~~~vg~E---~L~-~lv~~l 165 (287)
T d1o7qa_ 117 ISMM----------------------RMK-----TIGEHIVAHIQHEVDFLFCMDVDQVFQDKFGVE---TLG-ESVAQL 165 (287)
T ss_dssp HHHH----------------------HHH-----HHHHHHHHTHHHHCSEEEEECSSEEECSCBCGG---GCS-SEEEEE
T ss_pred HHHH----------------------HHH-----HHHHHHHHHHHCCCCEEEEEECCCEEECCCCCC---CCC-CCCCEE
T ss_conf 5799----------------------999-----999999986403488599974896685265565---268-765550
Q ss_pred CCCCCCHH--H--HHHHHCCC---CCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHC--C------CCCCCCCCCC
Q ss_conf 13422234--5--54321259---9999987532440776037887865999999999971--6------9941101100
Q 006506 499 QSCSVSLG--Q--LKSYLGEN---SYDKNSCAWMSGLNIVDLARWRELDLTKTYQRLVREV--S------MGEESKEAVA 563 (643)
Q Consensus 499 edc~~~~~--~--~~~yl~~~---~~~~~~cyfNSGVlLiDL~kWRk~nitek~~~~lq~~--~------~DQdllnlGs 563 (643)
.-+..... . +.+.-... ..+.+.-|+..|+.==-..+.- ++++.+...+..- + .|..-||-
T Consensus 166 Hp~~y~~~~~~fpyErrp~S~AyIp~~egd~Yy~G~~~GG~~~~vl--~m~~~~~~~i~~D~~n~IiA~WHDESHLNk-- 241 (287)
T d1o7qa_ 166 QAWWYKADPNDFTYERRKESAAYIPFGEGDFYYHAAIFGGTPTQVL--NITQECFKGILKDKKNDIEAQWHDESHLNK-- 241 (287)
T ss_dssp CTTTTTSCGGGSCCCCCTTSTTCCCTTCCSCCEEEEEEEECHHHHH--HHHHHHHHHHHHHHHTTCCCTTTHHHHHHH--
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHH--HHHHHHHHHCCCCCCCCCCEECCCHHHHHH--
T ss_conf 4542477887787768977643466777866887423298879999--999999982667423895510145777766--
Q ss_pred CCCHHHHCCCCEEEECCCCCCCC-CCCCCCCCHHHHCCCEEEECCCCCC
Q ss_conf 10002102684688078434357-7888988875416986998248999
Q 006506 564 LRGSLLTFQDLVYALDGVWALSG-LGHDYGLNIEAIKKAAVLHYNGNMK 611 (643)
Q Consensus 564 LP~~ll~F~g~i~~Ld~~WN~~g-LGyd~~i~~e~ie~a~IIHY~G~~K 611 (643)
.......++.|++.|.+-. .++ ...++|||+.-..|
T Consensus 242 ----yf~~~kp~~~LsPeY~~~~~~~~--------~~~~kiv~l~~~~k 278 (287)
T d1o7qa_ 242 ----YFLLNKPTKILSPEYCWDYHIGL--------PADIKLVKMSWQTK 278 (287)
T ss_dssp ----HHHHSCCSEEECGGGSBCGGGCC--------CTTCCSCSEEECCC
T ss_pred ----HHHHCCCCCCCCHHHCCCCCCCC--------CCCCEEEEEECCCC
T ss_conf ----78767997460866548754589--------99754999804685
No 5
>d1lzia_ c.68.1.9 (A:) Glycosyltransferase A catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=41.88 E-value=6.9 Score=14.42 Aligned_cols=208 Identities=12% Similarity=0.150 Sum_probs=108.6
Q ss_pred CCCEEEEEEECC-CHHHH-HHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCCC-CCCCCHHH
Q ss_conf 992189998199-61469-9999998730999971999994998988899999733688814999973442-12454167
Q 006506 343 PSLHHYVIFSTN-VLASS-VVINSTVLCARESKNQVFHVLTDGQNYFAMKLWFFRNTFKEATVQVLNIEQL-NLESHDKA 419 (643)
Q Consensus 343 ~~~iHIvi~sDN-vLaas-VvInSii~Nsk~p~~ivFHIItD~is~~~mk~wF~~n~~~~a~I~Vi~ie~~-~~~~~~~~ 419 (643)
+--+-+++|.-+ |+.-. --+.|+-++=-...++.|||+||+-..-. + ...-.+..+.++.+... .|-. .
T Consensus 51 ~~tIgl~vfATGkY~~Fl~~f~eSaek~Fmpg~~v~yyvFTD~~~~vP---~--i~l~~~~~v~v~~i~~~~~Wp~---i 122 (283)
T d1lzia_ 51 NTTIGLTVFAIKKYVAFLKLFLETAEKHFMVGHRVHYYVFTDQPAAVP---R--VTLGTGRQLSVLEVRAYKRWQD---V 122 (283)
T ss_dssp TCEEEEEEEECGGGGGGHHHHHHHHHHHBSTTSEEEEEEEESCGGGSC---C--CCCCTTEEEEEEECC-----------
T ss_pred CCEEEEEEEEECHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCC---C--CCCCCCCCEEEEECCCCCCCCH---H
T ss_conf 966999999827299999999999998568997169999979975577---6--5446677448996047788733---7
Q ss_pred HHHHHCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCEEEECCCHHHHCCCCCCCEEEEEC
Q ss_conf 88750354100110235799986554542338677886532130257829998145668079167871148997125421
Q 006506 420 ILIHMFLPVEYRVSLLSVDGPSIHSKMQYISVFSHLHYLLPEIFQSLTKVVVLDDDVVVQKDLSALWDINMGGKVNGAVQ 499 (643)
Q Consensus 420 ~l~~l~~~~~fr~~f~~~~~p~~~~r~~ylS~lny~Rl~LPeLlP~ldKVLYLD~DVIVq~DLseLw~iDL~gkviaAVe 499 (643)
.| .|.++++ .+..-+++.++|-++|+|+|+++++.+.+= .| |..+|...
T Consensus 123 TL----------------------~R~~~i~-----k~i~~~~~~e~DyLf~~DaDm~f~~~vg~E---~L-~~lvgv~H 171 (283)
T d1lzia_ 123 SM----------------------RRMEMIS-----DFCERRFLSEVDYLVCVDVDMEFRDHVGVE---IL-TPLFGTLH 171 (283)
T ss_dssp --------------------------------------CHHHHHHHCSEEEEECSSEEECSCBCGG---GC-SSEEEEBC
T ss_pred HH----------------------HHHHHHH-----HHHHHHHHHCCCEEEEEECCEEEECCCCCE---EE-CCEEEEEC
T ss_conf 89----------------------9999999-----988887640388799952664786143628---70-57346706
Q ss_pred CCCCCHHH----H------HHHHCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHC-C-C------CCCCCCC
Q ss_conf 34222345----5------43212599999987532440776037887865999999999971-6-9------9411011
Q 006506 500 SCSVSLGQ----L------KSYLGENSYDKNSCAWMSGLNIVDLARWRELDLTKTYQRLVREV-S-M------GEESKEA 561 (643)
Q Consensus 500 dc~~~~~~----~------~~yl~~~~~~~~~cyfNSGVlLiDL~kWRk~nitek~~~~lq~~-~-~------DQdllnl 561 (643)
-|.-...+ + ..|+ ..+.+.-||..|+.==-..+.-+ +++.+...+..- . + |..-+|-
T Consensus 172 P~~y~~~~~~~~yErrp~S~AyI---p~~egd~Yy~G~~~GG~~~~vl~--m~~~~~~~i~~D~~n~IiA~WHDEShlNk 246 (283)
T d1lzia_ 172 PGFYGSSREAFTYERRPQSQAYI---PKDEGDFYYLGGFFGGSVQEVQR--LTRACHQAMMVDQANGIEAVWHDESHLNK 246 (283)
T ss_dssp TTTTTCCGGGSCCCCCTTSTTCC---CTTCCSCCBCTTEEEEEHHHHHH--HHHHHHHHHHHHHHTTCCCTTHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCEEEEC---CCCCCCEEEEEEEECCCHHHHHH--HHHHHHHHHHHHHCCCCEEEECCHHHHHH
T ss_conf 43037887788754673512624---67789868873131877999999--99999998877763890363045667666
Q ss_pred CCCCCHHHHCCCCEEEECCCCCCCC--CCCCCCCCHHHHCCCEEEE
Q ss_conf 0010002102684688078434357--7888988875416986998
Q 006506 562 VALRGSLLTFQDLVYALDGVWALSG--LGHDYGLNIEAIKKAAVLH 605 (643)
Q Consensus 562 GsLP~~ll~F~g~i~~Ld~~WN~~g--LGyd~~i~~e~ie~a~IIH 605 (643)
.. ..+..++.|++.|++-. .|+. ..+..++++|
T Consensus 247 -----yf-~~nkp~kvLsPeY~~~e~~~~~p-----~~ik~~r~~~ 281 (283)
T d1lzia_ 247 -----YL-LRHKPTKVLSPEYLWDQQLLGWP-----AVLRKLRFTA 281 (283)
T ss_dssp -----HH-HHSCCSEEECGGGSBCHHHHCCC-----TTCSCCCEEE
T ss_pred -----HH-HHCCCCCEECHHHCCCCCCCCCC-----CCCCEEEEEC
T ss_conf -----78-77899726296556893224797-----6032546742
No 6
>d1s4na_ c.68.1.16 (A:) Glycolipid 2-alpha-mannosyltransferase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=13.24 E-value=23 Score=10.82 Aligned_cols=215 Identities=14% Similarity=0.107 Sum_probs=112.8
Q ss_pred EEEEEECC-CHHHH-HHHHHHHHHCCCCCCEEEEEEECC-CCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCH---HHH
Q ss_conf 89998199-61469-999999873099997199999499-8988899999733688814999973442124541---678
Q 006506 347 HYVIFSTN-VLASS-VVINSTVLCARESKNQVFHVLTDG-QNYFAMKLWFFRNTFKEATVQVLNIEQLNLESHD---KAI 420 (643)
Q Consensus 347 HIvi~sDN-vLaas-VvInSii~Nsk~p~~ivFHIItD~-is~~~mk~wF~~n~~~~a~I~Vi~ie~~~~~~~~---~~~ 420 (643)
-++++..| -|... -+|.|+-.+=..--++-.-++.|+ .+.+-++..-.. . ...+++..|..-.|.-.+ ...
T Consensus 21 ~~v~L~RN~el~~~l~si~~~e~rFN~ky~YPwvflnd~~fteeFk~~i~~~--~-sg~~~F~~i~~e~w~~P~~Id~~~ 97 (339)
T d1s4na_ 21 CYVTLVRNKELKGLLSSIKYVENKINKKFPYPWVFLNDEPFTEEFKEAVTKA--V-SSEVKFGILPKEHWSYPEWINQTK 97 (339)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHHHTTTTSCCCEEEEESSCCCHHHHHHHHHH--C-SSCEEEEECCGGGSSCCTTSCHHH
T ss_pred EEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHH--C-CCCEEEEECCHHHCCCCCCCCHHH
T ss_conf 8999951377999999999999973435899989946998999999999986--6-886389975989867989869899
Q ss_pred HHHHCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-----HCCCCEEEEEECCEEEECCCH-HHHC-CCCCCC
Q ss_conf 875035410011023579998655454233867788653213-----025782999814566807916-7871-148997
Q 006506 421 LIHMFLPVEYRVSLLSVDGPSIHSKMQYISVFSHLHYLLPEI-----FQSLTKVVVLDDDVVVQKDLS-ALWD-INMGGK 493 (643)
Q Consensus 421 l~~l~~~~~fr~~f~~~~~p~~~~r~~ylS~lny~Rl~LPeL-----lP~ldKVLYLD~DVIVq~DLs-eLw~-iDL~gk 493 (643)
..+. +..- .....+ ..-.|.-...||+...+ +.+++-+.-+|+|+.+..||. ++|. +.-+++
T Consensus 98 ~~~~------~~~~---~~~v~y--g~s~sYrhMCRF~sg~f~~~p~L~~YdYywRvdpD~~f~cdI~yD~F~~M~~n~k 166 (339)
T d1s4na_ 98 AAEI------RADA---ATKYIY--GGSESYRHMCRYQSGFFWRHELLEEYDWYWRVEPDIKLYCDINYDVFKWMQENEK 166 (339)
T ss_dssp HHHH------HHHH---TTTSTT--TTCHHHHHHHHHHHHTGGGSGGGTTCSEEEECCTTCEECSCCCSCHHHHHHHTTC
T ss_pred HHHH------HHHH---HCCCCC--CCCCCHHHHHHHHHCCCCCCHHHHCCCEEEEECCCCEEECCCCCCHHHHHHHCCC
T ss_conf 9999------9864---426765--4421106788785155313623321545898179957825788878898754397
Q ss_pred EEEEEC---CCCC---C-HHHHHHHH-------CCC----------CCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHH
Q ss_conf 125421---3422---2-34554321-------259----------9999987532440776037887865999999999
Q 006506 494 VNGAVQ---SCSV---S-LGQLKSYL-------GEN----------SYDKNSCAWMSGLNIVDLARWRELDLTKTYQRLV 549 (643)
Q Consensus 494 viaAVe---dc~~---~-~~~~~~yl-------~~~----------~~~~~~cyfNSGVlLiDL~kWRk~nitek~~~~l 549 (643)
..|.+. ++.. . +...++|+ ... +-.-+.|.|=+.+.+.+|+-||...+.+ +.+++
T Consensus 167 ~YGf~~~~~e~~~t~~tLw~~~~~f~~~~~~~~~~~n~~~~l~~~~~~~yn~c~fwsNFeI~~l~ffrs~~y~~-~f~~L 245 (339)
T d1s4na_ 167 VYGFTVSIHEYEVTIPTLWQTSMDFIKKNPEYLDENNLMSFLSNDNGKTYNLCHFWSNFEIANLNLWRSPAYRE-YFDTL 245 (339)
T ss_dssp CEEESCEEECCGGGCTTHHHHHHHHHHHCGGGSCTTCCHHHHCSSTTSSCCCEEECTTSEEEEHHHHTSHHHHH-HHHHH
T ss_pred EEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCEEEEECHHHCCHHHHH-HHHHH
T ss_conf 18998761442777763999999999859200480545532347787721234210670686026864889999-99999
Q ss_pred HHCC-------CCCCCCCCCCCCCHHHHCCCCEEEEC
Q ss_conf 9716-------99411011001000210268468807
Q 006506 550 REVS-------MGEESKEAVALRGSLLTFQDLVYALD 579 (643)
Q Consensus 550 q~~~-------~DQdllnlGsLP~~ll~F~g~i~~Ld 579 (643)
.+.+ +|..+..+ ...+.+-..+++..+
T Consensus 246 D~~GGfyyeRWGDapVhsl---a~~lfl~k~~ih~F~ 279 (339)
T d1s4na_ 246 DHQGGFFYERWGDAPVHSI---AAALFLPKDKIHYFS 279 (339)
T ss_dssp HHHTHHHHSCCCHHHHHHH---HHHHHSCGGGEEECT
T ss_pred HHCCCEEEECCCCHHHHHH---HHHHCCCHHHCEECC
T ss_conf 9759988862553899999---999809999923235
No 7
>d2axtm1 f.23.35.1 (M:1-36) Photosystem II reaction center protein M, PsbM {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=7.98 E-value=39 Score=9.30 Aligned_cols=14 Identities=50% Similarity=0.674 Sum_probs=11.6
Q ss_pred HHHHHHHHHHHHHH
Q ss_conf 99988889998752
Q 006506 34 ILSMLVPLAFLLGL 47 (643)
Q Consensus 34 ~~~~~~~~~~~~~~ 47 (643)
.|+++||-+||+-|
T Consensus 12 ~LFilvPt~FLliL 25 (36)
T d2axtm1 12 ALFVLVPSVFLIIL 25 (36)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
T ss_conf 99999989998875
No 8
>d2py5a2 e.8.1.1 (A:188-575) phi29 DNA polymerase {Bacteriophage phi-29 [TaxId: 10756]}
Probab=5.95 E-value=56 Score=8.17 Aligned_cols=48 Identities=13% Similarity=0.119 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHHHC-CCCEEEEEECCEEEEC--CCHHHHCCCCCCCEEEE
Q ss_conf 386778865321302-5782999814566807--91678711489971254
Q 006506 450 SVFSHLHYLLPEIFQ-SLTKVVVLDDDVVVQK--DLSALWDINMGGKVNGA 497 (643)
Q Consensus 450 S~lny~Rl~LPeLlP-~ldKVLYLD~DVIVq~--DLseLw~iDL~gkviaA 497 (643)
+..+++|+++-.... .-++|+|-|+|-|+.. ++.++..--..+..+|.
T Consensus 245 ~ita~~r~~~~~~~~~~~~~v~Y~DTDSi~~~~~~~~~~~~~~~~~~~lg~ 295 (388)
T d2py5a2 245 FITAWARYTTITAAQACYDRIIYCDTDSIHLTGTEIPDVIKDIVDPKKLGY 295 (388)
T ss_dssp HHHHHHHHHHHHHHHHTTTTEEEEETTEEEEESSSCCGGGGGGBCSSSTTS
T ss_pred HHHHHHHHHHHHHHHCCCCCEEEEECCEEEECCCCCHHHHHHHHCHHHHCC
T ss_conf 999888888998764148837998363688657762156776424565054
No 9
>d1iapa_ a.91.1.1 (A:) p115RhoGEF {Human (Homo sapiens) [TaxId: 9606]}
Probab=5.88 E-value=23 Score=10.89 Aligned_cols=35 Identities=14% Similarity=0.033 Sum_probs=27.9
Q ss_pred HHHHHHHHHHCCCCCCEEEEEEECC---CCHHHHHHHHH
Q ss_conf 9999999873099997199999499---89888999997
Q 006506 359 SVVINSTVLCARESKNQVFHVLTDG---QNYFAMKLWFF 394 (643)
Q Consensus 359 sVvInSii~Nsk~p~~ivFHIItD~---is~~~mk~wF~ 394 (643)
+|-++=++.|+ +|..+.||+++|- .+-..|++||.
T Consensus 17 aVFL~yv~sq~-DPspLLfyL~td~yk~~~~Kd~rk~~~ 54 (190)
T d1iapa_ 17 MALLQHVALQF-EPGPLLCCLHADMLGSLGPKEAKKAFL 54 (190)
T ss_dssp HHHHHHHHHHS-CSHHHHHHHHHHHHTTSCHHHHHHHHH
T ss_pred HHHHHHHHHCC-CCHHHHHHHHHHHHHCCCHHHHHHHHH
T ss_conf 99999999548-961569999999984568489999999
No 10
>d2bi6h1 g.3.12.1 (H:8-31) Bromelain inhibitor VI (cysteine protease inhibitor) {Pineapple (Ananas comosus) [TaxId: 4615]}
Probab=5.21 E-value=67 Score=7.67 Aligned_cols=12 Identities=33% Similarity=0.916 Sum_probs=8.9
Q ss_pred CCCCCEECCCEE
Q ss_conf 653100014400
Q 006506 172 NENCELKFGSYC 183 (643)
Q Consensus 172 ~~~~~~~~g~y~ 183 (643)
-|.|..+||+|-
T Consensus 11 cktckaefgkyi 22 (26)
T d2bi6h1 11 CKTCKAEFGKYI 22 (26)
T ss_dssp CSSBCCBTTBCC
T ss_pred HHHHHHHHCCEE
T ss_conf 889999857564
Done!