BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006510
(642 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZT48|ATE1_ARATH Arginyl-tRNA--protein transferase 1 OS=Arabidopsis thaliana GN=ATE1
PE=2 SV=2
Length = 632
Score = 657 bits (1696), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/655 (53%), Positives = 454/655 (69%), Gaps = 48/655 (7%)
Query: 6 MRSEASSSSNN-SNRKGETVVGDCGTCRSSCGYCKSSGRTSITHGLWAYSVTVDDYQDLL 64
++++ASSS + SNR E+V+ D G +S+CGYCKS R+SI+HGL A ++TV DYQ L+
Sbjct: 3 LKNDASSSHDGGSNR--ESVIDDHGRRKSTCGYCKSPARSSISHGLSAQTLTVYDYQALI 60
Query: 65 DRGWRRSGSFLYKPDMERTCCPSYTIRLRASDFAPSKEQRRVSRRMQSVVYIPRFLDGTV 124
DRGWRRSG++LYK +M++TCCP YTIRL+ASDF P+KEQ+RVSRR++ RFLDG +
Sbjct: 61 DRGWRRSGTYLYKHEMDKTCCPPYTIRLKASDFVPTKEQQRVSRRLE------RFLDGKL 114
Query: 125 DVEKKSVELIKDPSTSNCNKVSSSVENNSLSHNNEENNKEEEILQFLSGQIDNAVQLCIV 184
DV+ + + S+ VS + + +EEN K E ++ LS ID AVQLCI
Sbjct: 115 DVQPR-----EQRGASSSGDVSDTRRKTLGAAKSEENKKVEAVMDDLSKNIDQAVQLCIR 169
Query: 185 RGQFLSGIQLPKASVKKVSQAKRKLLVEGMENLLYTSNIAFQLAATLNRAQLAEKDVQQI 244
G+F S +Q+PKASVKKV A+RK L EG E +LYTSNIAF +AA + R Q +EK+
Sbjct: 170 SGEFPSNMQIPKASVKKVFCARRKKLAEGTEQILYTSNIAFPIAAAIKRIQTSEKEGIN- 228
Query: 245 RVFGQSIEDTGPSPKIIAAKLASSLIQLAETSGLSIRACNGHLNFYSAMKQASLDEDV-H 303
S E SP+ I+ L S++ ++ ET +SI+ C GH+NF S+ K + D DV
Sbjct: 229 -----SAEGNRLSPETISEMLLSAMHKVGETPDVSIKVCKGHINFLSSAKDSFSDRDVVP 283
Query: 304 IGTVSKESAKTCESKGGCLKNSSEHPQAKRHKLQIRLKRSSFDPQEFELYRRYQIKVHND 363
G +S+ + S+ K SE+ QA++ KL+I LKRSSFDP+E ELY+RYQ+KVHND
Sbjct: 284 NGNISRGANSLDGSETLHAKKDSENHQARKRKLEIHLKRSSFDPEEHELYKRYQLKVHND 343
Query: 364 KPDQVTETSYRRFLVDSPLVFVPPSGDDTVPPCGFGSFHQQYLIDDRLVAVGVIDILPRC 423
KP V E+SYRRFLVDSPL+ V PSGD+ VPPCGFGSFHQQY ID RL+AVGV+DILP+C
Sbjct: 344 KPGHVVESSYRRFLVDSPLIDVQPSGDEKVPPCGFGSFHQQYRIDGRLIAVGVVDILPKC 403
Query: 424 LSSKYLFWDPDYAFLSLGKYSALQEISWVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAY 483
LSS YLFWDPDYAFLSLGKYSA+QEI+WV ENQ CP+LQYYYLGYYIHSC KMRYKAAY
Sbjct: 404 LSSVYLFWDPDYAFLSLGKYSAIQEINWVIENQARCPSLQYYYLGYYIHSCSKMRYKAAY 463
Query: 484 HPSELLCPLRYQWVPYDIARPLLDRKPYVVLSDFASLQNESS--PCISENVM---GCQHD 538
PSELLCPLR+QWVP+++ARP+LD+KPYV+LSD A N+ S SE ++ +H+
Sbjct: 464 RPSELLCPLRFQWVPFEVARPMLDKKPYVILSDIAISHNQCSLLAGASETLVEPAASEHE 523
Query: 539 DIGQGDSNDVRMD---------------YDYDDEMLDPESESDDDEPDTETSCQTVGVED 583
D+ QG++ND M D D+EM + ESE E D G +D
Sbjct: 524 DMEQGETNDNFMGCSDEDEDEDEDDDDDDDDDEEMYETESEDSHIESDP-------GSKD 576
Query: 584 GDISNIVIRGQGTRVRYKDIQRVFGPIQRRSLESQLRKYMKVVGAELSERMVYAL 638
DI+NI+I G++ RYK+++++ P+ R+ LE L+ Y KVVGAELSERMVY +
Sbjct: 577 NDINNILIGLYGSQYRYKEMRQIITPVGRKQLEPMLQSYRKVVGAELSERMVYEI 631
>sp|O95260|ATE1_HUMAN Arginyl-tRNA--protein transferase 1 OS=Homo sapiens GN=ATE1 PE=1
SV=2
Length = 518
Score = 198 bits (504), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 95/192 (49%), Positives = 129/192 (67%), Gaps = 13/192 (6%)
Query: 329 PQAKRHKLQIRLKRSSFDPQEF--------ELYRRYQIKVHNDKPDQVTETSYRRFLVDS 380
P+ HKL++R+ RSS +F ++Y+RYQ+ +H + PD TE+ + RFL S
Sbjct: 263 PENASHKLEVRVVRSSPPSSQFKATLLESYQVYKRYQMVIHKNPPDTPTESQFTRFLCSS 322
Query: 381 PL-VFVPPSGDDTVPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLS 439
PL PP+G D CG+GSFHQQY +D +++AVGVIDILP C+SS YL++DPDY+FLS
Sbjct: 323 PLEAETPPNGPD----CGYGSFHQQYWLDGKIIAVGVIDILPNCVSSVYLYYDPDYSFLS 378
Query: 440 LGKYSALQEISWVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQWVPY 499
LG YSAL+EI++ ++ L YYY+G+YIHSC KM+YK Y PS+LLCP Y WVP
Sbjct: 379 LGVYSALREIAFTRQLHEKTSQLSYYYMGFYIHSCPKMKYKGQYRPSDLLCPETYVWVPI 438
Query: 500 DIARPLLDRKPY 511
+ P L+ Y
Sbjct: 439 EQCLPSLENSKY 450
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 58/76 (76%), Gaps = 1/76 (1%)
Query: 35 CGYCKSSGRTSITHGLWAYSVTVDDYQDLLDRGWRRSGSFLYKPDMERTCCPSYTIRLRA 94
CGYCK+ S ++G+WA+S+TV DYQDL+DRGWRRSG ++YKP M +TCCP YTIR R
Sbjct: 23 CGYCKNES-GSRSNGMWAHSMTVQDYQDLIDRGWRRSGKYVYKPVMNQTCCPQYTIRCRP 81
Query: 95 SDFAPSKEQRRVSRRM 110
F PSK ++V ++M
Sbjct: 82 LQFQPSKSHKKVLKKM 97
>sp|Q9Z2A5|ATE1_MOUSE Arginyl-tRNA--protein transferase 1 OS=Mus musculus GN=Ate1 PE=1
SV=2
Length = 516
Score = 194 bits (493), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 96/203 (47%), Positives = 131/203 (64%), Gaps = 11/203 (5%)
Query: 329 PQAKRHKLQIRLKRSSFDPQEF--------ELYRRYQIKVHNDKPDQVTETSYRRFLVDS 380
P+ HKL++R+ RSS +F ++Y+RYQ+ VH D PD+ T + + RFL S
Sbjct: 261 PENASHKLEVRVVRSSPPSPQFRATFQESYQVYKRYQMVVHKDPPDKPTVSQFTRFLCSS 320
Query: 381 PLVFVPPSGDDTVPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSL 440
PL P+ P CG+GSFHQQY +D +++AVGV+DILP C+SS YL++DPDY+FLSL
Sbjct: 321 PLEAEHPADG---PECGYGSFHQQYWLDGKIIAVGVLDILPYCVSSVYLYYDPDYSFLSL 377
Query: 441 GKYSALQEISWVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQWVPYD 500
G YSAL+EI++ ++ L YYY+G+YIHSC KMRYK Y PS+LLCP Y WVP +
Sbjct: 378 GVYSALREIAFTRQLHEKTSQLSYYYMGFYIHSCPKMRYKGQYRPSDLLCPETYVWVPIE 437
Query: 501 IARPLLDRKPYVVLSDFASLQNE 523
P LD Y + ++E
Sbjct: 438 QCLPSLDNSKYCRFNQDPEAEDE 460
Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 44/82 (53%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
Query: 29 GTCRSSCGYCKSSGRTSITHGLWAYSVTVDDYQDLLDRGWRRSGSFLYKPDMERTCCPSY 88
G CGYCK+ S ++G+WA+S+TV DYQDL+DRGWRRSG ++YKP M++TCCP Y
Sbjct: 17 GQTSFQCGYCKNK-LGSRSYGMWAHSMTVQDYQDLIDRGWRRSGKYVYKPVMDQTCCPQY 75
Query: 89 TIRLRASDFAPSKEQRRVSRRM 110
TIR F PSK ++V ++M
Sbjct: 76 TIRCHPLQFQPSKSHKKVLKKM 97
>sp|Q2PFX0|ATE1_MACFA Arginyl-tRNA--protein transferase 1 OS=Macaca fascicularis GN=ATE1
PE=2 SV=1
Length = 518
Score = 192 bits (488), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 95/192 (49%), Positives = 127/192 (66%), Gaps = 13/192 (6%)
Query: 329 PQAKRHKLQIRLKRSSF-DPQEFE-------LYRRYQIKVHNDKPDQVTETSYRRFLVDS 380
P+ HKL++RL +SF DP+ LY +YQ+ +H D PD+ +T + RFL S
Sbjct: 263 PENASHKLEVRLVPASFEDPEFKSSFSQSFSLYVKYQVAIHQDLPDECGKTEFTRFLCSS 322
Query: 381 PL-VFVPPSGDDTVPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLS 439
PL PP+G D CG+GSFHQQY +D +++AVGVIDILP +SS YL++DPDY+FLS
Sbjct: 323 PLEAETPPNGPD----CGYGSFHQQYWLDGKIIAVGVIDILPNYVSSVYLYYDPDYSFLS 378
Query: 440 LGKYSALQEISWVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQWVPY 499
LG YSAL+EI++ ++ L YYY+G+YIHSC KM+YK Y PS+LLCP Y WVP
Sbjct: 379 LGVYSALREIAFTRQLHEKTSQLSYYYMGFYIHSCPKMKYKGQYRPSDLLCPETYVWVPI 438
Query: 500 DIARPLLDRKPY 511
+ P L+ Y
Sbjct: 439 EQCLPSLENSKY 450
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 58/76 (76%), Gaps = 1/76 (1%)
Query: 35 CGYCKSSGRTSITHGLWAYSVTVDDYQDLLDRGWRRSGSFLYKPDMERTCCPSYTIRLRA 94
CGYCK+ S ++G+WA+S+TV DYQDL+DRGWRRSG ++YKP M +TCCP YTIR R
Sbjct: 23 CGYCKNES-GSRSNGMWAHSMTVQDYQDLIDRGWRRSGKYVYKPVMNQTCCPQYTIRCRP 81
Query: 95 SDFAPSKEQRRVSRRM 110
F PSK ++V ++M
Sbjct: 82 LQFQPSKSHKKVLKKM 97
>sp|O96539|ATE1_DROME Arginyl-tRNA--protein transferase 1 OS=Drosophila melanogaster
GN=Ate1 PE=2 SV=3
Length = 484
Score = 183 bits (464), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 93/194 (47%), Positives = 124/194 (63%), Gaps = 12/194 (6%)
Query: 330 QAKRHKLQIRLKRSSFD------PQEFELYRRYQIKVHNDKPDQVTETSYRRFLVDSPLV 383
+ +H+L++RL D PQ F LY++YQI +HND P + +Y+ L +PL
Sbjct: 231 ETNKHRLKLRLIHVYDDEFRRTLPQSFALYKKYQISIHNDPPKD--QDAYKEHLQATPLQ 288
Query: 384 FVPPSGDDTVPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKY 443
P P G+GSFHQQY +DD+L+AVGVIDILP C+SS Y F+DPDY+FLSLG Y
Sbjct: 289 NEKPWDG---PEMGYGSFHQQYWLDDKLIAVGVIDILPGCVSSVYFFYDPDYSFLSLGTY 345
Query: 444 SALQEISWVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQWVPY-DIA 502
+L+EI V+ P+L+YYY+G+YIHSC KMRYK PS LLCP Y+W+P D+
Sbjct: 346 GSLREIELVQSLAEKVPSLKYYYMGFYIHSCPKMRYKGKLSPSYLLCPETYEWLPLTDVI 405
Query: 503 RPLLDRKPYVVLSD 516
R LD Y L++
Sbjct: 406 RAKLDEHKYQRLNE 419
Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 61/101 (60%), Gaps = 8/101 (7%)
Query: 23 TVVGDCGTCRSSCGYCKSSGRTSITHGLWAYSVTVDDYQDLLDRGWRRSGSFLYKPDMER 82
++V G+ +S CGYC + S++HG+ AY + DYQDL+DRGWRR G + YK +
Sbjct: 4 SIVSYYGSQQSKCGYC-AGANCSLSHGMHAYQLDCRDYQDLIDRGWRRCGYYCYKLRNQE 62
Query: 83 TCCPSYTIRLRASDFAPSKEQRRVSRRMQSVVYIPRFL-DG 122
TCCP YTI+ +F SK +R+ RR I RFL DG
Sbjct: 63 TCCPCYTIKCNGLEFKLSKSNKRILRR------INRFLRDG 97
>sp|Q55EI0|ATE1_DICDI Arginyl-tRNA--protein transferase 1 OS=Dictyostelium discoideum
GN=ate1 PE=3 SV=1
Length = 629
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 70/118 (59%), Positives = 86/118 (72%)
Query: 389 GDDTVPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQE 448
G+ P G+GSFHQ Y +D +LV VGVIDILP CLSS Y F+DPD+ FLSLGKYSAL E
Sbjct: 431 GEIKTPKPGYGSFHQYYRLDGKLVGVGVIDILPECLSSVYFFYDPDFNFLSLGKYSALNE 490
Query: 449 ISWVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQWVPYDIARPLL 506
I WV++ P L+YYY+GYYIHSC+KM+YKA Y PS+LLC ++WV + A L
Sbjct: 491 IEWVQKVSQSIPQLKYYYMGYYIHSCQKMKYKANYQPSQLLCLETFKWVEFKKAISFL 548
Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 104/411 (25%), Positives = 192/411 (46%), Gaps = 68/411 (16%)
Query: 1 MKKSKMRSEASSSSNNSNRKGETVVGDCGTCRSSCGYCKSS--GRTSITHGLWAYSVTVD 58
M++ M+S S+SS ++ G+ SSC YC + + I +G+ A +T +
Sbjct: 1 MERFLMQSSLSTSS---------LIYPHGSYDSSCNYCDAGEDKKGRICYGMVADQLTCE 51
Query: 59 DYQDLLDRGWRRSGSFLYKPDM--ERTCCPSYTIRLRASDFAPSKEQRRVSRRMQSVVYI 116
DYQ L+D+GWRRSG+FLYKP+ ++TCCP YTIRL S F PSK+ + ++ + +
Sbjct: 52 DYQLLIDQGWRRSGTFLYKPNNSDKKTCCPQYTIRLDTSSFKPSKDNKSTIKKFNNYI-- 109
Query: 117 PRFLDGTVDVEKKSVELIKDPSTSNCNK-VSSSVENNSLSHNNEENNKEEEILQFLSGQI 175
L+ + KD ST++ K + ++ + S + NN +E I+ ++
Sbjct: 110 ---LNNIIKE--------KDSSTTSTTKDIINTTQIKSNTKNNNNKTNDENII-----KL 153
Query: 176 DNAVQLCIVRGQFLSGIQLPKASVKKVSQAKRKLLVEGME-----NLLYTSNIAFQLAAT 230
+N + I+ +F++ K ++ +K+L E ++ N + ++ L+
Sbjct: 154 NNDIIEIILNNEFIN----------KFNEQDKKILKENLKIKINSNKMIKETGSYSLSFG 203
Query: 231 L---NRAQLAEKDVQQIRVFGQSIEDTGPSPKIIAAKLASSLIQLAETSGLSIRACNGHL 287
+ R++L + + ++ +I + + + +S Q G N H+
Sbjct: 204 IFNKYRSELNQHSITIDQIINFTILEFNKT-------INNSDYQFNLEKGQ-----NNHI 251
Query: 288 NFYSAMKQASLDEDVHIGT--VSKESAKTCESKGGCLKNSSEHPQAKRHKLQIRLKRSSF 345
NF L++ T + S K + ++ +HK +I + +
Sbjct: 252 NFKMINSSQILNDSTKTKTLNIQNNSNKNSTTTATTATTTTTTTNEPKHKFEISIHKPKC 311
Query: 346 DPQEFELYRRYQIKVHNDKPDQVTETSYRRFLVDSPLV-FVPP--SGDDTV 393
+ F LY +YQ +H + D+ T++ ++RFLVDSPL+ + P S DD V
Sbjct: 312 TDEVFSLYCKYQKIIHKE-DDEKTKSGFKRFLVDSPLIPIIHPDESYDDYV 361
>sp|O14133|ATE1_SCHPO Arginyl-tRNA--protein transferase 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC3C7.07c PE=3 SV=3
Length = 391
Score = 127 bits (318), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/234 (35%), Positives = 133/234 (56%), Gaps = 38/234 (16%)
Query: 335 KLQIRLKRSSFDPQEFELYRRYQIKVHNDKPDQVTETSYRRFLVDSPLVFVPPSGDDTVP 394
K + ++ ++ ++FE++++YQ++VH +K +++T+ + RFL +SPL + D +
Sbjct: 126 KYSVTMEPCTYTDEKFEVFKKYQMQVHLEKEEEITKKGFSRFLCNSPLF----NEDKGIK 181
Query: 395 PCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQEISWVKE 454
+GS+HQ Y RLVAVGV+D+LP +SS YLF+DPD + SLG+ SA +EI W+
Sbjct: 182 ---YGSYHQMYRFQGRLVAVGVLDLLPHGVSSVYLFYDPDMSKFSLGRISACREI-WL-- 235
Query: 455 NQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQWVPYDIARPLLDRKPYVVL 514
C YY+GYYIH+C KM+YKA Y PS LL P +W+P +
Sbjct: 236 -ALECGYRY-YYMGYYIHTCPKMKYKATYSPSYLLNPGTNKWIP---------------I 278
Query: 515 SDFASLQNESSPCISENVMGCQHDDIGQGDSNDVRMDYDYDDEMLDPESESDDD 568
+F SL N +P ++ G +++D++ DYD + S+++DD
Sbjct: 279 ENFTSLWNTGAP---------KYISFGDENNSDIQTAVDYDSS--EDSSQNEDD 321
Score = 83.2 bits (204), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 55/82 (67%), Gaps = 1/82 (1%)
Query: 33 SSCGYCKSSGRTSITHGLWAYSVTVDDYQDLLDRGWRRSGSFLYKPDMERTCCPSYTIRL 92
+ CGYCKS GR + GL A ++ +DYQ L+D GWRRSG +LYKP+ + +CC YTIRL
Sbjct: 15 TECGYCKS-GRKTEHFGLLAEKLSCEDYQRLIDLGWRRSGHYLYKPNGKTSCCSLYTIRL 73
Query: 93 RASDFAPSKEQRRVSRRMQSVV 114
+ +F +KEQ++ ++ V
Sbjct: 74 DSYNFKIAKEQKKAIKKWVKYV 95
>sp|P16639|ATE1_YEAST Arginyl-tRNA--protein transferase 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ATE1 PE=1 SV=2
Length = 503
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 103/194 (53%), Gaps = 26/194 (13%)
Query: 339 RLKRSSFDPQEFELYRRYQIKVHNDKPDQVTETSYRRFLVDSPLVFVPPSGDDT------ 392
R + + + +++ L+ +YQ KVH D + + S++RFL D+P F P + T
Sbjct: 156 RFEPALYSEEKYHLFVKYQEKVHQDYNN--SPKSFKRFLCDTP--FGPEAVLGTQESWEQ 211
Query: 393 ------VPPC----GFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGK 442
+ P G H+ Y + +L+A+ V DILP +SS Y WDPDY+ SLGK
Sbjct: 212 LNNWQRMKPGEKLKHMGPVHECYYYEGKLIAITVSDILPSGISSVYFIWDPDYSKWSLGK 271
Query: 443 YSALQEISWVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQWVPYDIA 502
SAL++++ ++ LQYYYLGYYI C KM YKA Y +E+L +++P
Sbjct: 272 LSALRDLAIIQRTN-----LQYYYLGYYIEDCPKMNYKANYG-AEVLDVCHSKYIPLKPI 325
Query: 503 RPLLDRKPYVVLSD 516
+ ++ R V+ +
Sbjct: 326 QDMISRGKLFVIGE 339
Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 47 THGLWAYSVTVDDYQDLLDRGWRRSGSFLYKPDMERTCCPSYTIRLRASDFAPSKEQR-- 104
T G + + V Y + + G+RRSG FLYK D R CC YTIR + +KE +
Sbjct: 57 TIGSFVEHMDVATYDRMCNMGFRRSGKFLYKVDPLRNCCRLYTIRTAPQELNMTKELKKC 116
Query: 105 --RVSRRMQSVVYIP 117
R + R+ S Y P
Sbjct: 117 ISRFATRITSEDYCP 131
>sp|Q9I0M0|ATE_PSEAE Putative arginyl-tRNA--protein transferase OS=Pseudomonas
aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 /
LMG 12228) GN=ate PE=3 SV=1
Length = 235
Score = 86.7 bits (213), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 83/170 (48%), Gaps = 36/170 (21%)
Query: 335 KLQIRLKRSSFDPQEFELYRRYQIKVHNDKPDQVTETSYRRFLVDSPLVFVPPSGDDT-- 392
+LQ+ KR SF+ + ++LYRRY + H D PPS D
Sbjct: 92 ELQVIRKRPSFNEEYYDLYRRYIEQRHADGD------------------MYPPSRDQFAT 133
Query: 393 -----VPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQ 447
+P C F F + RL+A+ V D+LP LS+ Y F+DPD SLG+Y+ L
Sbjct: 134 FLVRDLPFCCFFEFR----LHGRLLAIAVTDVLPNGLSAVYTFYDPDEEQRSLGRYAILW 189
Query: 448 EISWVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQWV 497
+I+ +T LQ YLGY+I +CRKM YK Y P EL R WV
Sbjct: 190 QIA-----ETERLGLQAVYLGYWIKNCRKMNYKTQYRPIELFVNQR--WV 232
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 4/76 (5%)
Query: 60 YQDLLDRGWRRSGSFLYKPDMERTCCPSYTIRLRASDFAPSKEQRRVSRR---MQSVVYI 116
Y L + G+RRSG LY+P + C R+ +DF+P+++QRR+ +R +Q +
Sbjct: 41 YASLSEVGFRRSGDHLYRPHCQH-CTACIAARIPVADFSPNRQQRRILKRNAELQVIRKR 99
Query: 117 PRFLDGTVDVEKKSVE 132
P F + D+ ++ +E
Sbjct: 100 PSFNEEYYDLYRRYIE 115
>sp|Q02NB0|ATE_PSEAB Putative arginyl-tRNA--protein transferase OS=Pseudomonas
aeruginosa (strain UCBPP-PA14) GN=ate PE=3 SV=1
Length = 235
Score = 86.7 bits (213), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 83/170 (48%), Gaps = 36/170 (21%)
Query: 335 KLQIRLKRSSFDPQEFELYRRYQIKVHNDKPDQVTETSYRRFLVDSPLVFVPPSGDDT-- 392
+LQ+ KR SF+ + ++LYRRY + H D PPS D
Sbjct: 92 ELQVIRKRPSFNEEYYDLYRRYIEQRHADGD------------------MYPPSRDQFAT 133
Query: 393 -----VPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQ 447
+P C F F + RL+A+ V D+LP LS+ Y F+DPD SLG+Y+ L
Sbjct: 134 FLVRDLPFCCFFEFR----LHGRLLAIAVTDVLPNGLSAVYTFYDPDEEQRSLGRYAILW 189
Query: 448 EISWVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQWV 497
+I+ +T LQ YLGY+I +CRKM YK Y P EL R WV
Sbjct: 190 QIA-----ETERLGLQAVYLGYWIKNCRKMNYKTQYRPIELFVNQR--WV 232
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 4/76 (5%)
Query: 60 YQDLLDRGWRRSGSFLYKPDMERTCCPSYTIRLRASDFAPSKEQRRVSRR---MQSVVYI 116
Y L + G+RRSG LY+P + C R+ +DF+P+++QRR+ +R +Q +
Sbjct: 41 YASLSEVGFRRSGDHLYRPHCQH-CTACIAARIPVADFSPNRQQRRILKRNAELQVIRKR 99
Query: 117 PRFLDGTVDVEKKSVE 132
P F + D+ ++ +E
Sbjct: 100 PSFNEEYYDLYRRYIE 115
>sp|B7UV23|ATE_PSEA8 Putative arginyl-tRNA--protein transferase OS=Pseudomonas
aeruginosa (strain LESB58) GN=ate PE=3 SV=1
Length = 235
Score = 86.7 bits (213), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 83/170 (48%), Gaps = 36/170 (21%)
Query: 335 KLQIRLKRSSFDPQEFELYRRYQIKVHNDKPDQVTETSYRRFLVDSPLVFVPPSGDDT-- 392
+LQ+ KR SF+ + ++LYRRY + H D PPS D
Sbjct: 92 ELQVIRKRPSFNEEYYDLYRRYIEQRHADGD------------------MYPPSRDQFAT 133
Query: 393 -----VPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQ 447
+P C F F + RL+A+ V D+LP LS+ Y F+DPD SLG+Y+ L
Sbjct: 134 FLVRDLPFCCFFEFR----LHGRLLAIAVTDVLPNGLSAVYTFYDPDEEQRSLGRYAILW 189
Query: 448 EISWVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQWV 497
+I+ +T LQ YLGY+I +CRKM YK Y P EL R WV
Sbjct: 190 QIA-----ETERLGLQAVYLGYWIKNCRKMNYKTQYRPIELFVNQR--WV 232
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 4/76 (5%)
Query: 60 YQDLLDRGWRRSGSFLYKPDMERTCCPSYTIRLRASDFAPSKEQRRVSRR---MQSVVYI 116
Y L + G+RRSG LY+P + C R+ +DF+P+++QRR+ +R +Q +
Sbjct: 41 YASLSEVGFRRSGDHLYRPHCQH-CTACIAARIPVADFSPNRQQRRILKRNAELQVIRKR 99
Query: 117 PRFLDGTVDVEKKSVE 132
P F + D+ ++ +E
Sbjct: 100 PSFNEEYYDLYRRYIE 115
>sp|A6V4G8|ATE_PSEA7 Putative arginyl-tRNA--protein transferase OS=Pseudomonas
aeruginosa (strain PA7) GN=ate PE=3 SV=1
Length = 235
Score = 86.7 bits (213), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 83/170 (48%), Gaps = 36/170 (21%)
Query: 335 KLQIRLKRSSFDPQEFELYRRYQIKVHNDKPDQVTETSYRRFLVDSPLVFVPPSGDDT-- 392
+LQ+ KR SF+ + ++LYRRY + H D PPS D
Sbjct: 92 ELQVIRKRPSFNEEYYDLYRRYIEQRHADGD------------------MYPPSRDQFAT 133
Query: 393 -----VPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQ 447
+P C F F + RL+A+ V D+LP LS+ Y F+DPD SLG+Y+ L
Sbjct: 134 FLVRDLPFCCFFEFR----LHGRLLAIAVTDVLPNGLSAVYTFYDPDEEQRSLGRYAILW 189
Query: 448 EISWVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQWV 497
+I+ +T LQ YLGY+I +CRKM YK Y P EL R WV
Sbjct: 190 QIA-----ETERLGLQAVYLGYWIKNCRKMNYKTQYRPIELFVNQR--WV 232
Score = 42.0 bits (97), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 60 YQDLLDRGWRRSGSFLYKPDMERTCCPSYTIRLRASDFAPSKEQRRVSRR---MQSVVYI 116
Y L + G+RRSG LY+P + C R+ + F+P+++QRR+ +R +Q +
Sbjct: 41 YASLSEVGFRRSGDHLYRPHCQH-CTACIAARIPVAGFSPNRQQRRILKRNAELQVIRKR 99
Query: 117 PRFLDGTVDVEKKSVE 132
P F + D+ ++ +E
Sbjct: 100 PSFNEEYYDLYRRYIE 115
>sp|Q48H68|ATE_PSE14 Putative arginyl-tRNA--protein transferase OS=Pseudomonas syringae
pv. phaseolicola (strain 1448A / Race 6) GN=ate PE=3
SV=1
Length = 235
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 83/166 (50%), Gaps = 30/166 (18%)
Query: 336 LQIRLKRSSFDPQEFELYRRYQIKVHNDKPDQVTETSYRRFLVDSPLVFVPPSGDD---- 391
+Q++ R +F + F+LY+RY + H D PPS +
Sbjct: 93 VQVQSARPAFTEEYFDLYQRYIEQRHADGD------------------MFPPSREQFSTF 134
Query: 392 TVPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQEISW 451
V F F++ + +D RL+AV V D+LP LS+ Y F++PD SLG+Y+ L +I+
Sbjct: 135 LVRDLPFSRFYE-FRVDQRLLAVAVTDLLPNGLSAVYTFYEPDEERRSLGRYAILWQIAE 193
Query: 452 VKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQWV 497
Q LQ YLGY+I +C+KM YK Y P ELL R WV
Sbjct: 194 AARLQ-----LQAVYLGYWIKNCKKMNYKTQYRPIELLTNQR--WV 232
Score = 41.6 bits (96), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 8/81 (9%)
Query: 57 VDDYQDLLDRGWRRSGSFLYKPDMER--TCCPSYTIRLRASDFAPSKEQRRVSRR---MQ 111
V Y DL D G+RRSG LY+P + C P+ R+ + F P ++Q+R+ +R +Q
Sbjct: 38 VQVYADLSDMGFRRSGDHLYRPHCQNCSACVPA---RIPVNLFVPDRQQKRILKRNADVQ 94
Query: 112 SVVYIPRFLDGTVDVEKKSVE 132
P F + D+ ++ +E
Sbjct: 95 VQSARPAFTEEYFDLYQRYIE 115
>sp|Q4ZRK9|ATE_PSEU2 Putative arginyl-tRNA--protein transferase OS=Pseudomonas syringae
pv. syringae (strain B728a) GN=ate PE=3 SV=1
Length = 235
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 86/167 (51%), Gaps = 32/167 (19%)
Query: 336 LQIRLKRSSFDPQEFELYRRYQIKVHND----KPDQVTETSYRRFLV-DSPLVFVPPSGD 390
+Q++ + +F + F+LY+RY + H D P Q + FLV D P
Sbjct: 93 IQVQSAKPAFTQEYFDLYQRYIEQRHADGDMFPPSQ---EQFSTFLVRDLP--------- 140
Query: 391 DTVPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQEIS 450
F F++ + +D RL+AV V D+LP LS+ Y F++PD SLG+Y+ L +I+
Sbjct: 141 -------FSRFYE-FRVDQRLLAVAVTDLLPNGLSAVYTFYEPDEERRSLGRYAILWQIA 192
Query: 451 WVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQWV 497
Q LQ YLGY+I +C+KM YK Y P ELL R WV
Sbjct: 193 EAARLQ-----LQAVYLGYWIKNCKKMNYKTQYRPIELLTNQR--WV 232
Score = 40.8 bits (94), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 8/81 (9%)
Query: 57 VDDYQDLLDRGWRRSGSFLYKPDMER--TCCPSYTIRLRASDFAPSKEQRRVSRR---MQ 111
V Y DL D G+RRSG LY+P + C P+ R+ + F P ++Q+R+ +R +Q
Sbjct: 38 VQVYADLSDMGFRRSGDHLYRPHCQNCSACVPA---RIPVNLFIPDRQQKRILKRNVDIQ 94
Query: 112 SVVYIPRFLDGTVDVEKKSVE 132
P F D+ ++ +E
Sbjct: 95 VQSAKPAFTQEYFDLYQRYIE 115
>sp|A7H303|ATE_CAMJD Putative arginyl-tRNA--protein transferase OS=Campylobacter jejuni
subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97)
GN=ate PE=3 SV=1
Length = 239
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 61/95 (64%), Gaps = 7/95 (7%)
Query: 397 GFGSFHQQ--YLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQEISWVKE 454
GF +F + + I+D+LV V +IDIL +SS Y F+DPD+++ SLGK+S L EI K+
Sbjct: 135 GFMNFGYELAFYIEDKLVCVDLIDILEDGISSIYCFYDPDFSYFSLGKFSLLNEIQIAKK 194
Query: 455 NQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELL 489
L Y YLGY++ C+ + YKA Y PSE+L
Sbjct: 195 -----MNLDYIYLGYFVKKCQSLSYKADYTPSEIL 224
>sp|A8FM84|ATE_CAMJ8 Putative arginyl-tRNA--protein transferase OS=Campylobacter jejuni
subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828)
GN=ate PE=3 SV=1
Length = 239
Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 61/95 (64%), Gaps = 7/95 (7%)
Query: 397 GFGSFHQQ--YLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQEISWVKE 454
GF +F + + I+D+LV V +IDIL +SS Y F+DPD+++ SLGK+S L EI K+
Sbjct: 135 GFMNFGYELAFYIEDKLVCVDLIDILEDGISSIYCFYDPDFSYFSLGKFSLLNEIQIAKK 194
Query: 455 NQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELL 489
L Y YLGY++ C+ + YKA Y P+E+L
Sbjct: 195 -----MNLDYIYLGYFVKKCQSLSYKADYTPNEIL 224
>sp|Q5HU66|ATE_CAMJR Putative arginyl-tRNA--protein transferase OS=Campylobacter jejuni
(strain RM1221) GN=ate PE=3 SV=1
Length = 239
Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 61/95 (64%), Gaps = 7/95 (7%)
Query: 397 GFGSFHQQ--YLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQEISWVKE 454
GF +F + + I+D+LV V +IDIL +SS Y F+DPD+++ SLGK+S L EI K+
Sbjct: 135 GFMNFGYELAFYIEDKLVCVDLIDILEDGISSIYCFYDPDFSYFSLGKFSLLNEIQIAKK 194
Query: 455 NQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELL 489
L Y YLGY++ C+ + YKA Y P+E+L
Sbjct: 195 -----MNLDYIYLGYFVKKCQSLSYKADYTPNEIL 224
>sp|A1W023|ATE_CAMJJ Putative arginyl-tRNA--protein transferase OS=Campylobacter jejuni
subsp. jejuni serotype O:23/36 (strain 81-176) GN=ate
PE=3 SV=1
Length = 239
Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 61/95 (64%), Gaps = 7/95 (7%)
Query: 397 GFGSFHQQ--YLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQEISWVKE 454
GF +F + + I+D+LV V +IDIL +SS Y F+DPD+++ SLGK+S L EI K+
Sbjct: 135 GFMNFGYELAFYIEDKLVCVDLIDILEDGISSIYCFYDPDFSYFSLGKFSLLNEIQIAKK 194
Query: 455 NQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELL 489
L Y YLGY++ C+ + YKA Y P+E+L
Sbjct: 195 -----MNLDYIYLGYFVKKCQSLSYKADYTPNEIL 224
>sp|Q9PNQ6|ATE_CAMJE Putative arginyl-tRNA--protein transferase OS=Campylobacter jejuni
subsp. jejuni serotype O:2 (strain NCTC 11168) GN=ate
PE=3 SV=1
Length = 239
Score = 80.5 bits (197), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 61/95 (64%), Gaps = 7/95 (7%)
Query: 397 GFGSFHQQ--YLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQEISWVKE 454
GF +F + + I+D+LV V +IDIL +SS Y F+DPD+++ SLGK+S L EI K+
Sbjct: 135 GFMNFGYELAFYIEDKLVCVDLIDILEDGISSIYCFYDPDFSYFSLGKFSLLNEIQIAKK 194
Query: 455 NQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELL 489
L Y YLGY++ C+ + YKA Y P+E+L
Sbjct: 195 -----MNLDYIYLGYFVKKCQSLSYKADYTPNEIL 224
>sp|Q88FS6|ATE_PSEPK Putative arginyl-tRNA--protein transferase OS=Pseudomonas putida
(strain KT2440) GN=ate PE=3 SV=1
Length = 235
Score = 80.1 bits (196), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 83/170 (48%), Gaps = 38/170 (22%)
Query: 336 LQIRLKRSSFDPQEFELYRRYQIKVHNDKPDQVTETSYRRFLVDSPLVFVPPSGDDT--- 392
L + R +F + FELYRRY H D PPS D
Sbjct: 93 LTVTAARPAFKEEYFELYRRYIETRHADGD------------------MYPPSRDQFSTF 134
Query: 393 ----VPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQE 448
+P C F F ++ RL+AV V D+LP LS+ Y F++PD SLG+++ L +
Sbjct: 135 LVRDLPFCWFYEFR----LEGRLMAVAVCDLLPNGLSAVYTFYEPDEERRSLGRFAILWQ 190
Query: 449 IS-WVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQWV 497
I+ +++N L+ YLGY+I +C+KM YK Y P ELL + +WV
Sbjct: 191 ITEALRQN------LEAVYLGYWIKNCKKMNYKTQYRPIELL--INQRWV 232
Score = 42.4 bits (98), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 8/81 (9%)
Query: 57 VDDYQDLLDRGWRRSGSFLYKPDME--RTCCPSYTIRLRASDFAPSKEQRRVSRRMQSVV 114
V Y DL + G+RRSG LY+P + C P+ R+ A+ F P+++QRR+ +R +
Sbjct: 38 VHVYADLSEMGFRRSGDHLYRPHCQNCNACVPA---RIPAARFIPNRQQRRILKRNADLT 94
Query: 115 YI---PRFLDGTVDVEKKSVE 132
P F + ++ ++ +E
Sbjct: 95 VTAARPAFKEEYFELYRRYIE 115
>sp|A5W1H0|ATE_PSEP1 Putative arginyl-tRNA--protein transferase OS=Pseudomonas putida
(strain F1 / ATCC 700007) GN=ate PE=3 SV=1
Length = 235
Score = 79.3 bits (194), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 83/170 (48%), Gaps = 38/170 (22%)
Query: 336 LQIRLKRSSFDPQEFELYRRYQIKVHNDKPDQVTETSYRRFLVDSPLVFVPPSGDDT--- 392
L + R +F + FELYRRY H D PPS D
Sbjct: 93 LTVTAARPAFKEEYFELYRRYIETRHADGD------------------MYPPSRDQFSTF 134
Query: 393 ----VPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQE 448
+P C F F ++ RL+AV V D+LP LS+ Y F++PD SLG+++ L +
Sbjct: 135 LVRDLPFCWFYEFR----LEGRLMAVAVCDLLPNGLSAVYTFYEPDEDRRSLGRFAILWQ 190
Query: 449 IS-WVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQWV 497
I+ +++N L+ YLGY+I +C+KM YK Y P ELL + +WV
Sbjct: 191 ITEALRQN------LEAVYLGYWIKNCKKMNYKTQYRPIELL--INQRWV 232
Score = 42.4 bits (98), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 8/81 (9%)
Query: 57 VDDYQDLLDRGWRRSGSFLYKPDME--RTCCPSYTIRLRASDFAPSKEQRRVSRRMQSVV 114
V Y DL + G+RRSG LY+P + C P+ R+ A+ F P+++QRR+ +R +
Sbjct: 38 VHVYADLSEMGFRRSGDHLYRPHCQNCNACVPA---RIPAARFIPNRQQRRILKRNADLT 94
Query: 115 YI---PRFLDGTVDVEKKSVE 132
P F + ++ ++ +E
Sbjct: 95 VTAARPAFKEEYFELYRRYIE 115
>sp|A4VLV4|ATE_PSEU5 Putative arginyl-tRNA--protein transferase OS=Pseudomonas stutzeri
(strain A1501) GN=ate PE=3 SV=1
Length = 235
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 82/165 (49%), Gaps = 28/165 (16%)
Query: 336 LQIRLKRSSFDPQEFELYRRYQIKVHNDKPDQV--TETSYRRFLV-DSPLVFVPPSGDDT 392
LQ+R R +F + + LY Y K H D D + + FLV D P
Sbjct: 93 LQVRGVRPAFSEELYALYANYIEKRHADG-DMYPPSREQFNTFLVRDLP----------- 140
Query: 393 VPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQEISWV 452
F F++ + +D RL+AV V D+LP LS+ Y F+DPD SLG+Y+ L ++
Sbjct: 141 -----FSRFYE-FRLDGRLLAVAVTDVLPNGLSAVYTFYDPDEERRSLGRYAILWQM--- 191
Query: 453 KENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQWV 497
+ L+ YLGY+I +CRKM YK Y P ELL R WV
Sbjct: 192 --GEAARLGLKAVYLGYWIKNCRKMNYKTEYRPIELLVNQR--WV 232
>sp|Q3KA78|ATE_PSEPF Putative arginyl-tRNA--protein transferase OS=Pseudomonas
fluorescens (strain Pf0-1) GN=ate PE=3 SV=1
Length = 235
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 82/166 (49%), Gaps = 30/166 (18%)
Query: 336 LQIRLKRSSFDPQEFELYRRYQIKVHNDKPDQVTETSYRRFLVDSPLVFVPPSGDD---- 391
LQ+R + +F + F+LY+RY + H D PPS D
Sbjct: 93 LQVRPVKPAFSEEYFDLYQRYIEQRHADGD------------------MYPPSRDQFSTF 134
Query: 392 TVPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQEISW 451
V F F++ + +D RL+AV V D+LP LS+ Y F++P SLG+Y+ L +I+
Sbjct: 135 LVRDLPFSRFYE-FRLDGRLLAVAVTDLLPNGLSAVYTFYEPQEERRSLGRYAILWQIA- 192
Query: 452 VKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQWV 497
+ L+ YLGY+I +C+KM YK Y P ELL R WV
Sbjct: 193 ----EAQRLGLEAVYLGYWIKNCKKMNYKTQYRPIELLINQR--WV 232
Score = 42.4 bits (98), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 29 GTCRSSCGYCKSSGRTSITHGLWAYSVTVDDYQDLLDRGWRRSGSFLYKPDME--RTCCP 86
T SC Y T++ + + V Y DL + G+RRSG LY+P + C P
Sbjct: 11 ATQPHSCSYLPEEQATTLFLDP-SQPMDVHVYADLSEMGFRRSGDHLYRPHCQNCNACVP 69
Query: 87 SYTIRLRASDFAPSKEQRRVSRR---MQSVVYIPRFLDGTVDVEKKSVE 132
+ R+ + F P+++Q+R+ +R +Q P F + D+ ++ +E
Sbjct: 70 A---RIPVAQFNPNRQQKRIFKRNVDLQVRPVKPAFSEEYFDLYQRYIE 115
>sp|Q87ZS3|ATE_PSESM Putative arginyl-tRNA--protein transferase OS=Pseudomonas syringae
pv. tomato (strain DC3000) GN=ate PE=3 SV=1
Length = 235
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 80/166 (48%), Gaps = 30/166 (18%)
Query: 336 LQIRLKRSSFDPQEFELYRRYQIKVHNDKPDQVTETSYRRFLVDSPLVFVPPSGDD---- 391
+Q+ + F + F+LY+RY + H D PPS +
Sbjct: 93 IQVSSAKPVFTQEYFDLYQRYIEQRHADGD------------------MFPPSREQFSTF 134
Query: 392 TVPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQEISW 451
V F F++ + +D RL+AV V D+LP LS+ Y F++PD SLG+Y+ L +I
Sbjct: 135 LVRDLPFSRFYE-FRVDQRLLAVAVTDLLPNGLSAVYTFYEPDEERRSLGRYAILWQIGE 193
Query: 452 VKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQWV 497
Q LQ YLGY+I +C+KM YK Y P ELL R WV
Sbjct: 194 ATRLQ-----LQAVYLGYWIKNCKKMNYKTQYRPIELLTNQR--WV 232
Score = 40.8 bits (94), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 8/81 (9%)
Query: 57 VDDYQDLLDRGWRRSGSFLYKPDMER--TCCPSYTIRLRASDFAPSKEQRRVSRR---MQ 111
V Y DL D G+RRSG LY+P + C P+ R+ + F P ++Q+R+ +R +Q
Sbjct: 38 VQVYADLSDMGFRRSGDHLYRPHCQNCSACVPA---RIPVNLFVPDRQQKRILKRNADIQ 94
Query: 112 SVVYIPRFLDGTVDVEKKSVE 132
P F D+ ++ +E
Sbjct: 95 VSSAKPVFTQEYFDLYQRYIE 115
>sp|Q1IBD6|ATE_PSEE4 Putative arginyl-tRNA--protein transferase OS=Pseudomonas
entomophila (strain L48) GN=ate PE=3 SV=1
Length = 235
Score = 77.4 bits (189), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 82/170 (48%), Gaps = 38/170 (22%)
Query: 336 LQIRLKRSSFDPQEFELYRRYQIKVHNDKPDQVTETSYRRFLVDSPLVFVPPSGDDT--- 392
L + R F + F+LYRRY + H D PPS D
Sbjct: 93 LTVSAVRPVFKEEYFDLYRRYIEQRHADGD------------------MYPPSRDQFSTF 134
Query: 393 ----VPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQE 448
+P C F F ++ RL+AV V D+LP LS+ Y F++PD SLG+Y+ L +
Sbjct: 135 LVRDLPFCWFYEFR----LEGRLMAVAVCDLLPNGLSAVYTFYEPDEERRSLGRYAILWQ 190
Query: 449 IS-WVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQWV 497
I+ +++N L YLGY+I +C+KM YK Y P ELL + +WV
Sbjct: 191 ITEALRQN------LDAVYLGYWIKNCKKMNYKTQYRPIELL--INQRWV 232
Score = 41.6 bits (96), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 8/81 (9%)
Query: 57 VDDYQDLLDRGWRRSGSFLYKPDME--RTCCPSYTIRLRASDFAPSKEQRRVSRR---MQ 111
V Y DL + G+RRSG LY+P + C P+ R+ A F P+++QRR+ +R +
Sbjct: 38 VHVYADLSEMGFRRSGDHLYRPHCQNCNACVPA---RIPAVRFIPNRQQRRILKRNADLT 94
Query: 112 SVVYIPRFLDGTVDVEKKSVE 132
P F + D+ ++ +E
Sbjct: 95 VSAVRPVFKEEYFDLYRRYIE 115
>sp|B0KLX4|ATE_PSEPG Putative arginyl-tRNA--protein transferase OS=Pseudomonas putida
(strain GB-1) GN=ate PE=3 SV=1
Length = 235
Score = 77.0 bits (188), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 78/169 (46%), Gaps = 36/169 (21%)
Query: 336 LQIRLKRSSFDPQEFELYRRYQIKVHNDKPDQVTETSYRRFLVDSPLVFVPPSGDDT--- 392
L + R +F + FELYRRY H D PPS D
Sbjct: 93 LTVTAARPAFKEEYFELYRRYIETRHADGD------------------MYPPSRDQFSTF 134
Query: 393 ----VPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQE 448
+P C F F ++ L+AV V D+LP LS+ Y F++PD SLG+++ L +
Sbjct: 135 LVRDLPFCWFYEFR----LEGHLMAVAVCDLLPNGLSAVYTFYEPDEERRSLGRFAILWQ 190
Query: 449 ISWVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQWV 497
I+ L+ YLGY+I +C+KM YK Y P ELL + +WV
Sbjct: 191 ITEALRQD-----LEAVYLGYWIKNCKKMNYKTQYRPIELL--INQRWV 232
Score = 43.1 bits (100), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 57 VDDYQDLLDRGWRRSGSFLYKPDME--RTCCPSYTIRLRASDFAPSKEQRRVSRRMQSVV 114
V+ Y DL + G+RRSG LY+P + C P+ R+ A+ F P+++QRR+ +R +
Sbjct: 38 VNVYADLSEMGFRRSGDHLYRPHCQNCNACVPA---RIPAARFIPNRQQRRILKRNADLT 94
Query: 115 YI---PRFLDGTVDVEKKSVE 132
P F + ++ ++ +E
Sbjct: 95 VTAARPAFKEEYFELYRRYIE 115
>sp|Q82ST4|ATE_NITEU Putative arginyl-tRNA--protein transferase OS=Nitrosomonas europaea
(strain ATCC 19718 / NBRC 14298) GN=ate PE=3 SV=1
Length = 238
Score = 76.6 bits (187), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 88/182 (48%), Gaps = 34/182 (18%)
Query: 324 NSSEHPQAKRHK-LQIRLKRSSFDPQEFELYRRYQIKVHN----DKPDQVTETSYRRFL- 377
N ++ KRH+ LQI FDP F+LY+RYQ H D+ D+ YR FL
Sbjct: 77 NRTQRRIWKRHQHLQIAWHPLHFDPVHFDLYQRYQKSRHTNGSMDQDDENGRKQYRDFLL 136
Query: 378 ---VDSPLVFVPPSGDDTVPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPD 434
VDS LV +FH+ +++L V +ID LP LS Y F++PD
Sbjct: 137 KSTVDSFLV----------------TFHE----NEQLRMVSIIDRLPDGLSPVYTFFEPD 176
Query: 435 YAFLSLGKYSALQEISWVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRY 494
S G ++ L + + Q L Y YLGY+I + RKM YKA + P + L ++
Sbjct: 177 VPGSSYGTFNILWQTA-----QCRADRLPYLYLGYWIANSRKMHYKANFQPLQYLIDNQW 231
Query: 495 QW 496
Q+
Sbjct: 232 QY 233
Score = 43.5 bits (101), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 5/56 (8%)
Query: 60 YQDLLDRGWRRSGSFLYKPDME--RTCCPSYTIRLRASDFAPSKEQRRVSRRMQSV 113
Y L+ +G+RRSGS +Y+PD + C P +R+ F P++ QRR+ +R Q +
Sbjct: 38 YAQLIQQGYRRSGSLIYRPDCDYCHACIP---VRIPVELFDPNRTQRRIWKRHQHL 90
>sp|B1JBE6|ATE_PSEPW Putative arginyl-tRNA--protein transferase OS=Pseudomonas putida
(strain W619) GN=ate PE=3 SV=1
Length = 235
Score = 76.3 bits (186), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 78/169 (46%), Gaps = 36/169 (21%)
Query: 336 LQIRLKRSSFDPQEFELYRRYQIKVHNDKPDQVTETSYRRFLVDSPLVFVPPSGDDT--- 392
L + R +F + F+LYRRY H D PPS D
Sbjct: 93 LTVTAARPAFKEEYFDLYRRYIETRHADGD------------------MYPPSRDQFSTF 134
Query: 393 ----VPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQE 448
+P C F F + RL+AV V D+LP LS+ Y F++PD SLG+++ L +
Sbjct: 135 LVRDLPFCWFYEFR----LAGRLLAVAVCDLLPNGLSAVYTFYEPDEERRSLGRFAILWQ 190
Query: 449 ISWVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQWV 497
I+ L+ YLGY+I +C+KM YK Y P ELL + +WV
Sbjct: 191 ITEALRQD-----LEAVYLGYWIKNCKKMNYKTQYRPIELL--INQRWV 232
Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 8/81 (9%)
Query: 57 VDDYQDLLDRGWRRSGSFLYKPDME--RTCCPSYTIRLRASDFAPSKEQRRVSRRMQSVV 114
V Y DL + G+RRSG LY+P + C P+ R+ A+ F P+++QRR+ +R +
Sbjct: 38 VHVYADLSEMGFRRSGDHLYRPHCQNCNACVPA---RIPAARFIPNRQQRRILKRNADLT 94
Query: 115 YI---PRFLDGTVDVEKKSVE 132
P F + D+ ++ +E
Sbjct: 95 VTAARPAFKEEYFDLYRRYIE 115
>sp|Q4K9V0|ATE_PSEF5 Putative arginyl-tRNA--protein transferase OS=Pseudomonas
fluorescens (strain Pf-5 / ATCC BAA-477) GN=ate PE=3
SV=1
Length = 235
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 79/166 (47%), Gaps = 30/166 (18%)
Query: 336 LQIRLKRSSFDPQEFELYRRYQIKVHNDKPDQVTETSYRRFLVDSPLVFVPPSGDD---- 391
L + + F + F+LY+RY + H D PPS D
Sbjct: 93 LTVHAAKPCFSEEYFDLYQRYIEQRHADGD------------------MFPPSRDQFSTF 134
Query: 392 TVPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQEISW 451
V F F++ + +D RL+AV V D+LP LS+ Y F++PD SLG+++ L +I
Sbjct: 135 LVRDLPFSRFYE-FRLDGRLLAVAVTDLLPNGLSAVYTFYEPDEERRSLGRFAILWQIG- 192
Query: 452 VKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQWV 497
+T L YLGY+I +C+KM YK Y P ELL R WV
Sbjct: 193 ----ETLRLGLDAVYLGYWIKNCKKMNYKTQYRPIELLVNQR--WV 232
Score = 42.4 bits (98), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 5/55 (9%)
Query: 57 VDDYQDLLDRGWRRSGSFLYKPDME--RTCCPSYTIRLRASDFAPSKEQRRVSRR 109
V Y DL + G+RRSG LY+P + C P+ R+ A+ F PS++Q+R+ +R
Sbjct: 38 VHVYADLSEMGFRRSGDHLYRPHCQNCNACVPA---RIPATQFLPSRQQKRIIKR 89
>sp|Q2SJK9|ATE_HAHCH Putative arginyl-tRNA--protein transferase OS=Hahella chejuensis
(strain KCTC 2396) GN=ate PE=3 SV=1
Length = 234
Score = 72.8 bits (177), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 85/173 (49%), Gaps = 22/173 (12%)
Query: 325 SSEHPQAKRHKLQIRLKRSSFDPQEFELYRRYQIKVHNDKPDQVTETSYRRFLVDSPLVF 384
S E + L +RL+ + F+ + F LY+RY H D D T +D F
Sbjct: 82 SQERTWKRNSDLTVRLRSAQFEQEHFALYQRYISARHQDG-DMYPPT------LDQYESF 134
Query: 385 VPPSGDDTVPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYS 444
+ + +T+ F F + D +L+A+ V D LS+ Y F+DP+ +LG Y+
Sbjct: 135 LLEARSETL----FIEFRK----DSKLLAIAVTDRTTDGLSAIYTFFDPNEDKRALGVYA 186
Query: 445 ALQEISWVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQWV 497
L ++ + +E + L Y YLGY+I CRKM YK Y P ++L +R W+
Sbjct: 187 ILWQLQFAREQR-----LPYLYLGYWIRGCRKMSYKTNYRPIQVL--VRDSWI 232
>sp|C3JY60|ATE_PSEFS Putative arginyl-tRNA--protein transferase OS=Pseudomonas
fluorescens (strain SBW25) GN=ate PE=3 SV=1
Length = 235
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 78/166 (46%), Gaps = 30/166 (18%)
Query: 336 LQIRLKRSSFDPQEFELYRRYQIKVHNDKPDQVTETSYRRFLVDSPLVFVPPSGDD---- 391
L + + F + F+LY+RY + H D PPS D
Sbjct: 93 LTVMPAKPRFTEEYFDLYQRYIEERHADGD------------------MFPPSRDQFSTF 134
Query: 392 TVPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQEISW 451
V F F++ + D RLVAV V D+LP LS+ Y F++P SLG+++ L +I
Sbjct: 135 LVRDLPFSRFYE-FRADGRLVAVAVTDLLPNGLSAVYTFYEPAEERRSLGRFAILWQIGE 193
Query: 452 VKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQWV 497
+ L+ YLGY+I +C+KM YK Y P ELL + +WV
Sbjct: 194 ALRQE-----LEAVYLGYWIKNCKKMNYKTQYRPIELL--INQRWV 232
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 9/109 (8%)
Query: 29 GTCRSSCGYCKSSGRTSITHGLWAYSVTVDDYQDLLDRGWRRSGSFLYKPDME--RTCCP 86
T SC Y T++ + + V Y DL + G+RRSG LY+P + C P
Sbjct: 11 ATQPHSCSYLPDEQATTLFLDP-SQPMDVHVYADLSEMGFRRSGDHLYRPHCQNCNACVP 69
Query: 87 SYTIRLRASDFAPSKEQRRVSRRMQSVVYI---PRFLDGTVDVEKKSVE 132
+ R+ + F P + Q+R+ +R + + PRF + D+ ++ +E
Sbjct: 70 A---RIPVAQFLPDRNQKRILKRNADLTVMPAKPRFTEEYFDLYQRYIE 115
>sp|Q0BTF8|ATE_GRABC Putative arginyl-tRNA--protein transferase OS=Granulibacter
bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=ate
PE=3 SV=1
Length = 267
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 73/152 (48%), Gaps = 23/152 (15%)
Query: 348 QEFELYRRYQIKVHNDKP-DQVTETSYRRFLVDSPLVFVPPSGDDTVPPCGFGSFHQQYL 406
++F L++RYQ H D + T YR + D+P+ F Q
Sbjct: 109 EQFMLFQRYQKSRHGDGDMAAMGFTDYRAMVEDTPIQ------------TSILEFRDQ-- 154
Query: 407 IDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQEISWVKENQTHCPTLQYYY 466
DD L+ + D L LS+ Y F+DPD SLG Y+ L ++ QT L Y Y
Sbjct: 155 -DDVLLCACLTDRLNDGLSAVYSFYDPDLPQRSLGSYAILSMVA-----QTKAEGLPYLY 208
Query: 467 LGYYIHSCRKMRYKAAYHPSELLCPLRYQWVP 498
LGY++ + RKM YK+AY P+E+L R W P
Sbjct: 209 LGYWVANSRKMAYKSAYQPAEILS--RGAWRP 238
>sp|Q7NX30|ATE_CHRVO Putative arginyl-tRNA--protein transferase OS=Chromobacterium
violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 /
NBRC 12614 / NCIMB 9131 / NCTC 9757) GN=ate PE=3 SV=1
Length = 242
Score = 70.1 bits (170), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 76/161 (47%), Gaps = 32/161 (19%)
Query: 344 SFDPQEFELYRRYQIKVH------NDKPDQVTETSYRRFLVDSPLVFVPPSGDDTVPPCG 397
+FD + + LYR YQ H +D Q +E F+ SG D
Sbjct: 106 AFDAEHYALYRWYQQTRHAGGGMSDDDAQQYSE-------------FILKSGVD------ 146
Query: 398 FGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQEISWVKENQT 457
S ++ +D L V ++D L LS+ Y F+DP+ + SLG Y+ L ++ Q
Sbjct: 147 --SHLAEFRLDGELKMVSLVDRLVDGLSAVYTFYDPEDSQSSLGVYNVLWQV-----EQA 199
Query: 458 HCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQWVP 498
L Y YLGY+I CRKM YK+ Y P ++L R+Q +P
Sbjct: 200 RMLGLSYVYLGYWIADCRKMAYKSGYRPLQMLHGGRWQTMP 240
Score = 38.5 bits (88), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 7/74 (9%)
Query: 60 YQDLLDRGWRRSGSFLYKP--DMERTCCPSYTIRLRASDFAPSKEQRRVSRRMQSVVYIP 117
Y L+ G+RRSG + Y+P D + C P +RL F P++ QR+V RR +
Sbjct: 46 YSQLVRLGFRRSGLYTYRPYCDSCQACIP---VRLPVDQFRPNRTQRKVWRRGAGMS--A 100
Query: 118 RFLDGTVDVEKKSV 131
R+L D E ++
Sbjct: 101 RWLPLAFDAEHYAL 114
>sp|A4SNL5|ATE_AERS4 Putative arginyl-tRNA--protein transferase OS=Aeromonas salmonicida
(strain A449) GN=ate PE=3 SV=1
Length = 238
Score = 69.7 bits (169), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 70/144 (48%), Gaps = 22/144 (15%)
Query: 347 PQEFELYRRYQIKVHNDKPD-QVTETSYRRFLVDSPLVFVPPSGDDTVPPCGFGSFHQQY 405
P+ ++LY RY + H+D + T Y+ FL D +PP + +
Sbjct: 103 PEYYQLYERYIRERHHDGSMYPPSRTQYKGFL-----------HCDWMPP-----LYLEM 146
Query: 406 LIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQEISWVKENQTHCPTLQYY 465
D+RL+ V D+LP LS+ Y F+DP +A SLG ++ L ++ K +
Sbjct: 147 RKDNRLIGVATTDLLPHSLSAMYTFFDPAHADRSLGTFAILSQLDLAKRTGR-----TWL 201
Query: 466 YLGYYIHSCRKMRYKAAYHPSELL 489
YLGY + +CRKM YK Y P E L
Sbjct: 202 YLGYLVEACRKMNYKRQYLPHERL 225
Score = 37.7 bits (86), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 55 VTVDDYQDLLDRGWRRSGSFLYKPDMERTCCPSYTIRLRASDFAPSKEQRRVSRRMQSV 113
+ Y+ LL G+RRSG+ +Y+P C ++R+ + F PS+ Q+R+ + Q +
Sbjct: 36 LNASGYERLLTAGFRRSGNDIYRPHCP-ACSACQSLRIHSERFVPSRSQKRIRQLNQDL 93
>sp|C5BIJ7|ATE_TERTT Putative arginyl-tRNA--protein transferase OS=Teredinibacter
turnerae (strain ATCC 39867 / T7901) GN=ate PE=3 SV=1
Length = 243
Score = 69.7 bits (169), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 75/161 (46%), Gaps = 24/161 (14%)
Query: 344 SFDPQE-FELYRRYQIKVHNDKPDQ-VTETSYRRFLVDSPLVFVPPSGDDTVPPCGFGSF 401
S D +E F LY RY + H+D +T YR FL G F
Sbjct: 100 SIDNEECFSLYERYINERHSDGDMYPADKTQYRDFLTSE---------------WGITRF 144
Query: 402 HQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQEISWVKENQTHCPT 461
L+AV V+D L LS+ Y F+DPD SLG+++ L ++ K+ Q
Sbjct: 145 LLFRDAQQSLLAVAVVDRLENGLSAVYTFFDPDAEKRSLGRFAILYQLEQAKQQQ----- 199
Query: 462 LQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQWVPYDIA 502
L Y YLGY+I +C KM YK Y P ++L + WV D++
Sbjct: 200 LPYLYLGYWIRACTKMNYKTDYQPYQML--INQNWVNIDVS 238
Score = 37.0 bits (84), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 5/48 (10%)
Query: 60 YQDLLDRGWRRSGSFLYKPDME--RTCCPSYTIRLRASDFAPSKEQRR 105
Y +L G+RRSGS +Y+P E + C P IR+ A F P++ Q+R
Sbjct: 41 YSELSAYGFRRSGSHVYRPHCEQCQACIP---IRVCADSFTPNRSQKR 85
>sp|A0KJD9|ATE_AERHH Putative arginyl-tRNA--protein transferase OS=Aeromonas hydrophila
subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=ate
PE=3 SV=1
Length = 238
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 69/144 (47%), Gaps = 22/144 (15%)
Query: 347 PQEFELYRRYQIKVHNDKPD-QVTETSYRRFLVDSPLVFVPPSGDDTVPPCGFGSFHQQY 405
P+ ++LY RY + H+D + T Y+ FL D +PP + +
Sbjct: 103 PEYYQLYERYIRERHHDGSMYPPSRTQYKGFL-----------HCDWMPP-----LYLEM 146
Query: 406 LIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQEISWVKENQTHCPTLQYY 465
D+RL+ V D+LP LS+ Y F+DP +A SLG ++ L ++ + +
Sbjct: 147 RKDNRLIGVATTDLLPHSLSAMYTFFDPAHADRSLGTFAILSQLELARRTGR-----SWL 201
Query: 466 YLGYYIHSCRKMRYKAAYHPSELL 489
YLGY + CRKM YK Y P E L
Sbjct: 202 YLGYLVEECRKMNYKRQYLPHERL 225
Score = 38.1 bits (87), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 55 VTVDDYQDLLDRGWRRSGSFLYKPDMERTCCPSYTIRLRASDFAPSKEQRRVSRRMQSV 113
+ Y+ LL G+RRSG+ +Y+P C ++R+ + F PS+ Q+R+ + Q +
Sbjct: 36 LNASGYERLLTAGFRRSGNDIYRPHCP-ACNACQSLRIHSERFVPSRSQKRIRQLNQDI 93
>sp|A4XUY1|ATE_PSEMY Putative arginyl-tRNA--protein transferase OS=Pseudomonas mendocina
(strain ymp) GN=ate PE=3 SV=1
Length = 235
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 73/157 (46%), Gaps = 28/157 (17%)
Query: 342 RSSFDPQEFELYRRYQIKVHNDKPDQVTETSYRRFLVDSPLVFVPPSGDD----TVPPCG 397
R +F + ++LY RY + H D PPS D V
Sbjct: 99 RPAFTEEYYDLYVRYIEQRHADGD------------------MYPPSRDQFSTFLVRDLP 140
Query: 398 FGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQEISWVKENQT 457
F F++ + + RLVA+ V D+LP LS+ Y F+DP SLG+++ L +I +T
Sbjct: 141 FSRFYE-FRLAGRLVAIAVTDVLPNGLSAVYTFYDPAEERRSLGRFAILWQI-----GET 194
Query: 458 HCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRY 494
L YLGY+I +CRKM YK Y P EL R+
Sbjct: 195 ARLGLGAVYLGYWIKNCRKMNYKTQYRPIELFVNQRW 231
Score = 41.2 bits (95), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 36/56 (64%), Gaps = 5/56 (8%)
Query: 60 YQDLLDRGWRRSGSFLYKPDMER--TCCPSYTIRLRASDFAPSKEQRRVSRRMQSV 113
Y +L + G+RRSG LY+P ++ C P+ R+ A+ F P+++QRR+ +R + V
Sbjct: 41 YAELSEMGFRRSGDHLYRPHCQQCTACIPA---RIPAALFTPNRQQRRILKRNEDV 93
>sp|B2FTC1|ATE_STRMK Putative arginyl-tRNA--protein transferase OS=Stenotrophomonas
maltophilia (strain K279a) GN=ate PE=3 SV=1
Length = 251
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 73/162 (45%), Gaps = 24/162 (14%)
Query: 331 AKRHKLQIRLKRSSFDPQEFELYRRYQIKVH-NDKPDQVTETSYRRFLVDS----PLVFV 385
A+ L++R+ ++ F LY RY H N D + +FL+ S + +
Sbjct: 92 ARNADLEVRITAATARDDLFALYHRYLTHRHANGGMDDHGPHEFEQFLIGSWSHTRFMEM 151
Query: 386 PPSGDDTVPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSA 445
G D P +L+ V V D+ LS+ Y F+DPD+A LG ++
Sbjct: 152 RLPGHDGQP--------------SQLLGVAVTDVTEHGLSAVYTFFDPDHAARGLGTFAI 197
Query: 446 LQEISWVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSE 487
LQ+I W + L + YLGY+I +KM YK +HP E
Sbjct: 198 LQQIEWARRE-----GLPHVYLGYWIRGHQKMDYKRRFHPLE 234
Score = 33.9 bits (76), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 64 LDRGWRRSGSFLYKPDMERTCCPSYTIRLRASDFAPSKEQRRVSRR 109
L G+RRSG +Y+P C +R+ + FAP + QRR + R
Sbjct: 49 LSWGFRRSGDLVYRPHCAH-CQACVAVRIPVARFAPDRSQRRCAAR 93
>sp|A6T105|ATE_JANMA Putative arginyl-tRNA--protein transferase OS=Janthinobacterium sp.
(strain Marseille) GN=ate PE=3 SV=1
Length = 249
Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 81/185 (43%), Gaps = 23/185 (12%)
Query: 325 SSEHPQAKRHKLQIRLKRSSFDPQEFELYRRYQIKVH-NDKPDQVTETSYRRFLVDSPLV 383
S QAK LQ + + ++ + ++LY RYQ H DQ + Y +FL+ S +
Sbjct: 87 SQRRAQAKHSDLQTSVTKLTYLAEHYDLYLRYQTARHAGGGMDQDSREQYAQFLLQSKVN 146
Query: 384 FVPPSGDDTVPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKY 443
F + D L V +ID+L LSS Y F+DP+ S G Y
Sbjct: 147 ------------TRLVEFRED---DGTLRMVSIIDVLDDGLSSVYTFYDPEPPNASYGTY 191
Query: 444 SALQEISWVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQWVPYDIAR 503
+ L +I+ K Q + Y YLGY+I KM YK + P E L + +W P +
Sbjct: 192 NILWQIAQAKALQ-----MPYIYLGYWIKESPKMSYKTNFQPLEAL--QQGEWTPLPVVD 244
Query: 504 PLLDR 508
P R
Sbjct: 245 PAATR 249
Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 5/54 (9%)
Query: 55 VTVDDYQDLLDRGWRRSGSFLYKP--DMERTCCPSYTIRLRASDFAPSKEQRRV 106
+ D Y +L+ G+RRSG F Y+P D + C P +R++ +DF P++ QRR
Sbjct: 41 INADVYSELVKSGFRRSGIFTYRPYCDGCQACTP---VRIKVADFIPNRSQRRA 91
>sp|A7N1L8|ATE_VIBHB Putative arginyl-tRNA--protein transferase OS=Vibrio harveyi
(strain ATCC BAA-1116 / BB120) GN=ate PE=3 SV=1
Length = 233
Score = 67.0 bits (162), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 76/169 (44%), Gaps = 27/169 (15%)
Query: 330 QAKRHKLQIRLKRSSFDPQEFELYRRYQIKVHNDK---PDQVTETSYRRFLVDSPLVFVP 386
Q+K L +K DP F+LY RY + H D P + E + RF + L
Sbjct: 88 QSKGKALHWEMK-PELDPNWFDLYSRYIYERHKDGTMFPPR--EDEFARFTQTTWLT--- 141
Query: 387 PSGDDTVPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSAL 446
GF + + DRL+AV V DI+ +C S+ Y F+DPDY LSLG L
Sbjct: 142 ---------TGFLHIYDE---SDRLLAVAVTDIMDKCASAFYTFFDPDYP-LSLGTLGVL 188
Query: 447 QEISWVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQ 495
++ + + H + YLGY I C M YK + + L R+Q
Sbjct: 189 FQLEYCQRENKH-----WLYLGYQIDECPAMNYKTRFQRHQRLVNQRWQ 232
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 56 TVDDYQDLLDRGWRRSGSFLYKPDMERTCCPSYTIRLRASDFAPSKEQRRVSRRMQSVVY 115
T D+YQ L+ G+RRSG +YKP + C IR+ DF PSK Q+R+ + +++ +
Sbjct: 38 TEDNYQVLMANGFRRSGDTIYKPHCQH-CNACQPIRIAVPDFIPSKSQKRLQSKGKALHW 96
>sp|Q2Y5H6|ATE_NITMU Putative arginyl-tRNA--protein transferase OS=Nitrosospira
multiformis (strain ATCC 25196 / NCIMB 11849) GN=ate
PE=3 SV=1
Length = 251
Score = 66.6 bits (161), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 79/178 (44%), Gaps = 39/178 (21%)
Query: 324 NSSEHPQAKRHKLQIRLKRSSFDPQEFELYRRYQIKVHNDKP-DQVTETSYRRFL----V 378
N H A +H L + P + LY RYQ + H+ D+ + YR FL V
Sbjct: 93 NRHRHLVATQHDLY-------YHPDHYALYLRYQAQRHSGGGMDRDSREQYRHFLLPSNV 145
Query: 379 DSPLVFVPPSGDDTVPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFL 438
DS LV ++ + L V +ID LP +SS Y F+DPD
Sbjct: 146 DSKLV--------------------EFRENGVLRMVSIIDELPDGISSVYTFFDPDVPGA 185
Query: 439 SLGKYSALQEISWVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQW 496
S G Y+ L + +E + L Y YLGY+I RKM YKAA+ P + L + QW
Sbjct: 186 SFGTYNILWQAHQCRELK-----LPYLYLGYWIKDSRKMAYKAAFRPLQAL--INGQW 236
Score = 35.0 bits (79), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
Query: 60 YQDLLDRGWRRSGSFLYKP--DMERTCCPSYTIRLRASDFAPSKEQRRVSRRMQSVV 114
Y L+ G+RRSG+F Y+P D R C P +R+ A + QRR R + +V
Sbjct: 46 YGGLVQAGFRRSGAFTYRPFCDNCRACLP---VRVVVDSLALRRSQRRSWNRHRHLV 99
>sp|Q12B44|ATE_POLSJ Putative arginyl-tRNA--protein transferase OS=Polaromonas sp.
(strain JS666 / ATCC BAA-500) GN=ate PE=3 SV=1
Length = 254
Score = 66.6 bits (161), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 86/179 (48%), Gaps = 22/179 (12%)
Query: 333 RHK-LQIRLKRSSFDPQEFELYRRYQIKVH-NDKPDQVTETSYRRFLVDSPLVFVPPSGD 390
RH+ +Q R+ + F P+ ++LY RYQ H D + Y +FL+ S +
Sbjct: 94 RHQGMQARVLKLCFMPEHYQLYLRYQNGRHAGGGMDHDSIDQYTQFLLQSRVNSRLVEFR 153
Query: 391 DTVPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSALQEIS 450
+++P G+ L V ++D+L +S+ Y F++PD S G YS L +I
Sbjct: 154 ESLPNGEAGA----------LKMVSILDVLEDGISAVYTFYEPD-TRASYGNYSVLWQIE 202
Query: 451 WVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQWVPYDIA--RPLLD 507
+ + L Y YLGY+I KM YKA + P E+L + QW P D A RP D
Sbjct: 203 QARRLE-----LPYVYLGYWIAQSPKMNYKAGFKPHEIL--VNGQWTPSDAATRRPKTD 254
Score = 37.7 bits (86), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Query: 58 DDYQDLLDRGWRRSGSFLYKP--DMERTCCPSYTIRLRASDFAPSKEQRRVSRRMQSV 113
D Y +L+ G+RRSG F Y+P D + C P +R+ F + QRR R Q +
Sbjct: 44 DAYSELVTNGFRRSGMFTYRPYCDGCQACVP---LRVPVKSFKADRSQRRAWSRHQGM 98
>sp|B4SP02|ATE_STRM5 Putative arginyl-tRNA--protein transferase OS=Stenotrophomonas
maltophilia (strain R551-3) GN=ate PE=3 SV=1
Length = 251
Score = 66.2 bits (160), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 72/162 (44%), Gaps = 24/162 (14%)
Query: 331 AKRHKLQIRLKRSSFDPQEFELYRRYQIKVH-NDKPDQVTETSYRRFLVDS----PLVFV 385
A+ L++R+ ++ F LY RY H N D + +FL+ S + +
Sbjct: 92 ARNEDLEVRITAATARDDLFALYHRYLTHRHANGGMDDHGPHEFEQFLIGSWSHTRFMEM 151
Query: 386 PPSGDDTVPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSA 445
G D P +L+ V V D+ LS+ Y F+DPD+A LG ++
Sbjct: 152 RLPGHDGQP--------------SQLLGVAVTDVTEHGLSAVYTFFDPDHAARGLGTFAI 197
Query: 446 LQEISWVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSE 487
LQ+I W + L + YLGY+I +KM YK Y P E
Sbjct: 198 LQQIEWARRE-----GLPHVYLGYWIRGHQKMDYKRRYRPLE 234
Score = 33.9 bits (76), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 64 LDRGWRRSGSFLYKPDMERTCCPSYTIRLRASDFAPSKEQRRVSRRMQSV 113
L G+RRSG +Y+P C +R+ + FAP + QRR + R + +
Sbjct: 49 LSWGFRRSGDLVYRPHCAH-CQACVAVRIPVARFAPDRSQRRCAARNEDL 97
>sp|B0V8X8|ATE_ACIBY Putative arginyl-tRNA--protein transferase OS=Acinetobacter
baumannii (strain AYE) GN=ate PE=3 SV=1
Length = 271
Score = 66.2 bits (160), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 61/115 (53%), Gaps = 12/115 (10%)
Query: 386 PPSGDD----TVPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLG 441
PPS D V C SF + D+RL++V D++ LS+ Y F+DPD SLG
Sbjct: 132 PPSLDQFEKFLVHSCT-DSFFLELWKDNRLISVSTCDLMDDGLSAVYTFFDPDEHRRSLG 190
Query: 442 KYSALQEISWVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQW 496
YS L +I +VK L+Y YLGY++ KM YK+ Y P ELL L QW
Sbjct: 191 VYSILNQIEYVK-----TLGLEYVYLGYWVPHSAKMNYKSQYTPLELL--LDGQW 238
>sp|A3M311|ATE_ACIBT Putative arginyl-tRNA--protein transferase OS=Acinetobacter
baumannii (strain ATCC 17978 / NCDC KC 755) GN=ate PE=3
SV=2
Length = 271
Score = 66.2 bits (160), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 61/115 (53%), Gaps = 12/115 (10%)
Query: 386 PPSGDD----TVPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLG 441
PPS D V C SF + D+RL++V D++ LS+ Y F+DPD SLG
Sbjct: 132 PPSLDQFEKFLVHSCT-DSFFLELWKDNRLISVSTCDLMDDGLSAVYTFFDPDEHRRSLG 190
Query: 442 KYSALQEISWVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQW 496
YS L +I +VK L+Y YLGY++ KM YK+ Y P ELL L QW
Sbjct: 191 VYSILNQIEYVK-----TLGLEYVYLGYWVPHSAKMNYKSQYTPLELL--LDGQW 238
>sp|B0VTF8|ATE_ACIBS Putative arginyl-tRNA--protein transferase OS=Acinetobacter
baumannii (strain SDF) GN=ate PE=3 SV=1
Length = 271
Score = 66.2 bits (160), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 61/115 (53%), Gaps = 12/115 (10%)
Query: 386 PPSGDD----TVPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLG 441
PPS D V C SF + D+RL++V D++ LS+ Y F+DPD SLG
Sbjct: 132 PPSLDQFEKFLVHSCT-DSFFLELWKDNRLISVSTCDLMDDGLSAVYTFFDPDEHRRSLG 190
Query: 442 KYSALQEISWVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQW 496
YS L +I +VK L+Y YLGY++ KM YK+ Y P ELL L QW
Sbjct: 191 VYSILNQIEYVK-----TLGLEYVYLGYWVPHSAKMNYKSQYTPLELL--LDGQW 238
>sp|B2HUQ9|ATE_ACIBC Putative arginyl-tRNA--protein transferase OS=Acinetobacter
baumannii (strain ACICU) GN=ate PE=3 SV=1
Length = 271
Score = 66.2 bits (160), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 61/115 (53%), Gaps = 12/115 (10%)
Query: 386 PPSGDD----TVPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLG 441
PPS D V C SF + D+RL++V D++ LS+ Y F+DPD SLG
Sbjct: 132 PPSLDQFEKFLVHSCT-DSFFLELWKDNRLISVSTCDLMDDGLSAVYTFFDPDEHRRSLG 190
Query: 442 KYSALQEISWVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQW 496
YS L +I +VK L+Y YLGY++ KM YK+ Y P ELL L QW
Sbjct: 191 VYSILNQIEYVK-----TLGLEYVYLGYWVPHSAKMNYKSQYTPLELL--LDGQW 238
>sp|B7I7S8|ATE_ACIB5 Putative arginyl-tRNA--protein transferase OS=Acinetobacter
baumannii (strain AB0057) GN=ate PE=3 SV=1
Length = 271
Score = 66.2 bits (160), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 61/115 (53%), Gaps = 12/115 (10%)
Query: 386 PPSGDD----TVPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLG 441
PPS D V C SF + D+RL++V D++ LS+ Y F+DPD SLG
Sbjct: 132 PPSLDQFEKFLVHSCT-DSFFLELWKDNRLISVSTCDLMDDGLSAVYTFFDPDEHRRSLG 190
Query: 442 KYSALQEISWVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQW 496
YS L +I +VK L+Y YLGY++ KM YK+ Y P ELL L QW
Sbjct: 191 VYSILNQIEYVK-----TLGLEYVYLGYWVPHSAKMNYKSQYTPLELL--LDGQW 238
>sp|A1W7D8|ATE_ACISJ Putative arginyl-tRNA--protein transferase OS=Acidovorax sp.
(strain JS42) GN=ate PE=3 SV=1
Length = 246
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 79/170 (46%), Gaps = 26/170 (15%)
Query: 332 KRHK-LQIRLKRSSFDPQEFELYRRYQIKVH-NDKPDQVTETSYRRFL----VDSPLVFV 385
KRH LQ R+ R + P+ ++LY RYQ H DQ + Y +FL V+S LV
Sbjct: 93 KRHAGLQARVLRLCYLPEHYQLYLRYQNARHAGGGMDQDSIDQYTQFLLQSRVNSRLVEF 152
Query: 386 PPSGDDTVPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSA 445
+G D P L V ++D+L LS+ Y F++P+ S G Y+
Sbjct: 153 RETGADGQP--------------GTLKMVSILDVLEDGLSAVYTFYEPEPG-ASYGTYNV 197
Query: 446 LQEISWVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQ 495
L ++ Q L Y YLGY+I KM YKA + P EL R+Q
Sbjct: 198 LWQV-----QQARTLGLPYVYLGYWIEQSPKMNYKARFMPHELRIDGRWQ 242
Score = 39.7 bits (91), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 58 DDYQDLLDRGWRRSGSFLYKP--DMERTCCPSYTIRLRASDFAPSKEQRRVSRR 109
D Y L+ RG+RRSG F Y+P D + C P +R+ F P + QRR +R
Sbjct: 44 DVYSGLVARGFRRSGMFTYRPYCDGCQACTP---LRVVVDPFKPDRSQRRAWKR 94
>sp|B9MJA6|ATE_ACIET Putative arginyl-tRNA--protein transferase OS=Acidovorax ebreus
(strain TPSY) GN=ate PE=3 SV=1
Length = 246
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 79/170 (46%), Gaps = 26/170 (15%)
Query: 332 KRHK-LQIRLKRSSFDPQEFELYRRYQIKVH-NDKPDQVTETSYRRFL----VDSPLVFV 385
KRH LQ R+ R + P+ ++LY RYQ H DQ + Y +FL V+S LV
Sbjct: 93 KRHAGLQARVLRLCYLPEHYQLYLRYQNARHAGGGMDQDSIDQYTQFLLQSRVNSRLVEF 152
Query: 386 PPSGDDTVPPCGFGSFHQQYLIDDRLVAVGVIDILPRCLSSKYLFWDPDYAFLSLGKYSA 445
+G D P L V ++D+L LS+ Y F++P+ S G Y+
Sbjct: 153 RETGADGQP--------------GTLKMVSILDVLEDGLSAVYTFYEPEPG-ASYGTYNV 197
Query: 446 LQEISWVKENQTHCPTLQYYYLGYYIHSCRKMRYKAAYHPSELLCPLRYQ 495
L ++ Q L Y YLGY+I KM YKA + P EL R+Q
Sbjct: 198 LWQV-----QQARTLGLPYVYLGYWIEQSPKMNYKARFMPHELRIDGRWQ 242
Score = 39.7 bits (91), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 58 DDYQDLLDRGWRRSGSFLYKP--DMERTCCPSYTIRLRASDFAPSKEQRRVSRR 109
D Y L+ RG+RRSG F Y+P D + C P +R+ F P + QRR +R
Sbjct: 44 DVYSGLVARGFRRSGMFTYRPYCDGCQACTP---LRVVVDPFKPDRSQRRAWKR 94
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.133 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 233,736,566
Number of Sequences: 539616
Number of extensions: 9945784
Number of successful extensions: 51823
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 186
Number of HSP's successfully gapped in prelim test: 63
Number of HSP's that attempted gapping in prelim test: 50706
Number of HSP's gapped (non-prelim): 779
length of query: 642
length of database: 191,569,459
effective HSP length: 124
effective length of query: 518
effective length of database: 124,657,075
effective search space: 64572364850
effective search space used: 64572364850
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)