Query 006518
Match_columns 642
No_of_seqs 488 out of 3126
Neff 5.9
Searched_HMMs 29240
Date Tue Mar 26 18:41:01 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/006518.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_2145-2148//hhsearch_pdb/006518hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hg2_A Methyltransferase type 1.0 1 1 139.7 9.8 128 220-359 11-139 (257)
2 4e2x_A TCAB9; kijanose, tetron 1.0 1 1 129.2 7.0 102 253-358 107-211 (416)
3 1vl5_A Unknown conserved prote 1.0 1 1 125.4 13.0 113 234-358 26-143 (260)
4 4fsd_A Arsenic methyltransfera 1.0 1 1 124.0 12.5 106 253-359 83-207 (383)
5 1xtp_A LMAJ004091AAA; SGPP, st 1.0 1 1 122.6 7.6 103 253-358 93-200 (254)
6 1pjz_A Thiopurine S-methyltran 1.0 1 1 121.6 9.8 99 254-356 23-141 (203)
7 4gek_A TRNA (CMO5U34)-methyltr 1.0 1 1 121.0 13.9 105 253-360 70-183 (261)
8 3ujc_A Phosphoethanolamine N-m 1.0 1 1 120.8 10.8 104 253-359 55-163 (266)
9 2o57_A Putative sarcosine dime 1.0 1 1 120.8 12.6 104 253-359 82-191 (297)
10 3dh0_A SAM dependent methyltra 1.0 1 1 120.2 12.1 147 235-390 27-178 (219)
No 1
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=1.00 E-value=1 Score=139.71 Aligned_cols=128 Identities=18% Similarity=0.250 Sum_probs=99.4
Q ss_pred CCCCCCCCCC-HHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHCC
Q ss_conf 2332534423-133699999997202454211257775999799984689998224892328999539999999999809
Q 006518 220 FRSASLIFDG-VEDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG 298 (642)
Q Consensus 220 F~~~~~~fd~-~~~y~~~i~~lL~l~~g~~l~~~~~r~VLDIGCG~G~~a~~La~~g~~~~sV~giD~s~~~i~~A~erg 298 (642)
|...+..|+. ...|...+.+.+....+ ...+|||||||+|.++..|++++ ..|+++|+|+.|++.|+++
T Consensus 11 F~~~a~~Y~~~Rp~yp~~l~~~l~~~~~------~~~~vLDvGcGtG~~~~~l~~~~---~~v~gvD~s~~ml~~a~~~- 80 (257)
T 4hg2_A 11 FTPVADAYRAFRPRYPRALFRWLGEVAP------ARGDALDCGCGSGQASLGLAEFF---ERVHAVDPGEAQIRQALRH- 80 (257)
T ss_dssp ---------CCCCCCCHHHHHHHHHHSS------CSSEEEEESCTTTTTHHHHHTTC---SEEEEEESCHHHHHTCCCC-
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHCC------CCCCEEEECCCCCHHHHHHHHHC---CEEEEEECCHHHHHHHHHC-
T ss_conf 8899999998788758999999997369------99989998488979999999849---9899994817765554406-
Q ss_pred CCCEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCC
Q ss_conf 9926973024579899998008994554443454689999999750467919999958999
Q 006518 299 LPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLTN 359 (642)
Q Consensus 299 l~~~~~~~da~~LPfpd~SFDlV~s~~~l~~~~~d~~~lL~Ei~RVLKPGG~Lvis~~~~~ 359 (642)
.++.+.+++++.+|+++++||+|+|..+ +||. +...++.|+.|+|||||.|++......
T Consensus 81 ~~v~~~~~~~e~~~~~~~sfD~v~~~~~-~h~~-~~~~~~~e~~rvLkpgG~l~~~~~~~~ 139 (257)
T 4hg2_A 81 PRVTYAVAPAEDTGLPPASVDVAIAAQA-MHWF-DLDRFWAELRRVARPGAVFAAVTYGLT 139 (257)
T ss_dssp TTEEEEECCTTCCCCCSSCEEEEEECSC-CTTC-CHHHHHHHHHHHEEEEEEEEEEEECCC
T ss_pred CCCEEEHHHHHHHCCCCCCCCEEEEEEE-HHHH-HHHHHHHHHHHHCCCCCEEEEEECCCC
T ss_conf 7723430146664156874048977112-6674-489999999997589978999989998
No 2
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=1.00 E-value=1 Score=129.17 Aligned_cols=102 Identities=19% Similarity=0.243 Sum_probs=86.9
Q ss_pred CCCEEEEECCCCCHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHCCCCCE---EEEECCCCCCCCCCCCCEEEECCCCCC
Q ss_conf 77759997999846899982248923289995399999999998099926---973024579899998008994554443
Q 006518 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAM---IGSFASKQLPYPSLSFDMLHCARCGVD 329 (642)
Q Consensus 253 ~~r~VLDIGCG~G~~a~~La~~g~~~~sV~giD~s~~~i~~A~ergl~~~---~~~~da~~LPfpd~SFDlV~s~~~l~~ 329 (642)
+..+|||||||+|.++..+++++. .++++|+++.+++.|++++.+.. +...+...+++++++||+|++..+ ++
T Consensus 107 ~~~~VLDiGcG~G~~~~~l~~~g~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~fD~I~~~~v-l~ 182 (416)
T 4e2x_A 107 PDPFIVEIGCNDGIMLRTIQEAGV---RHLGFEPSSGVAAKAREKGIRVRTDFFEKATADDVRRTEGPANVIYAANT-LC 182 (416)
T ss_dssp SSCEEEEETCTTTTTHHHHHHTTC---EEEEECCCHHHHHHHHTTTCCEECSCCSHHHHHHHHHHHCCEEEEEEESC-GG
T ss_pred CCCEEEEECCCCCHHHHHHHHCCC---CEEEECCCHHHHHHHHHCCCCCCEEEECHHHHHHCCCCCCCEEEEEECCH-HH
T ss_conf 998799945889799999997699---68998989899999997499850146326357541357999799998985-77
Q ss_pred CCCCHHHHHHHHHHCCCCCCEEEEEECCC
Q ss_conf 45468999999975046791999995899
Q 006518 330 WDQKDGILLLEVDRVLKPGGYFVWTSPLT 358 (642)
Q Consensus 330 ~~~d~~~lL~Ei~RVLKPGG~Lvis~~~~ 358 (642)
+.+++..++.++.|+|||||++++.++..
T Consensus 183 h~~d~~~~l~~~~r~LkpgG~l~i~~~~~ 211 (416)
T 4e2x_A 183 HIPYVQSVLEGVDALLAPDGVFVFEDPYL 211 (416)
T ss_dssp GCTTHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred HCCCHHHHHHHHHHHCCCCEEEEEEECCH
T ss_conf 46789999999999858982899993776
No 3
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=1.00 E-value=1 Score=125.36 Aligned_cols=113 Identities=15% Similarity=0.263 Sum_probs=94.1
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHC----CC-CCEEEEECC
Q ss_conf 9999999720245421125777599979998468999822489232899953999999999980----99-926973024
Q 006518 234 SHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFAS 308 (642)
Q Consensus 234 ~~~i~~lL~l~~g~~l~~~~~r~VLDIGCG~G~~a~~La~~g~~~~sV~giD~s~~~i~~A~er----gl-~~~~~~~da 308 (642)
...+.+.+...+ +.+|||||||+|.++..+++.+ ..++++|.++.|++.++++ ++ ++.+..+|+
T Consensus 26 ~~~l~~~l~~~~--------~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~ 94 (260)
T 1vl5_A 26 LAKLMQIAALKG--------NEEVLDVATGGGHVANAFAPFV---KKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDA 94 (260)
T ss_dssp HHHHHHHHTCCS--------CCEEEEETCTTCHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC
T ss_pred HHHHHHHHCCCC--------CCEEEEEECCCCHHHHHHHHHC---CEEEEEECCHHHHHHHHHHHHHCCCCCEEEEEECH
T ss_conf 999999718888--------9979998278898999999758---97999909999999999999865999649999057
Q ss_pred CCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCC
Q ss_conf 57989999800899455444345468999999975046791999995899
Q 006518 309 KQLPYPSLSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 358 (642)
Q Consensus 309 ~~LPfpd~SFDlV~s~~~l~~~~~d~~~lL~Ei~RVLKPGG~Lvis~~~~ 358 (642)
..+|+++++||+|+|..+ ++|.+++..+|.++.|+|||||++++.++..
T Consensus 95 ~~l~~~~~~fD~V~~~~~-l~~~~d~~~~l~~~~r~LkpgG~l~~~~~~~ 143 (260)
T 1vl5_A 95 EQMPFTDERFHIVTCRIA-AHHFPNPASFVSEAYRVLKKGGQLLLVDNSA 143 (260)
T ss_dssp -CCCSCTTCEEEEEEESC-GGGCSCHHHHHHHHHHHEEEEEEEEEEEEEB
T ss_pred HHCCCCCCCEEEEEEHHH-HHHCCCHHHHHHHHHHHCCCCCEEEEEECCC
T ss_conf 769999997789988435-6726899999999999867797899997478
No 4
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=1.00 E-value=1 Score=124.04 Aligned_cols=106 Identities=19% Similarity=0.199 Sum_probs=91.0
Q ss_pred CCCEEEEECCCCCHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHC---------C----CCCEEEEECCCCC------CC
Q ss_conf 777599979998468999822489232899953999999999980---------9----9926973024579------89
Q 006518 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER---------G----LPAMIGSFASKQL------PY 313 (642)
Q Consensus 253 ~~r~VLDIGCG~G~~a~~La~~g~~~~sV~giD~s~~~i~~A~er---------g----l~~~~~~~da~~L------Pf 313 (642)
++.+|||||||+|.++..+++.......|+++|.++.+++.++++ | .++.+..+++..+ ++
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~~ 162 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEGV 162 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCCC
T ss_pred CCCEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHCCCCCC
T ss_conf 98979994571579999999972999889999799999999999998725530465678866999766887653015788
Q ss_pred CCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCC
Q ss_conf 9998008994554443454689999999750467919999958999
Q 006518 314 PSLSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLTN 359 (642)
Q Consensus 314 pd~SFDlV~s~~~l~~~~~d~~~lL~Ei~RVLKPGG~Lvis~~~~~ 359 (642)
++++||+|++..+ +++.++...+|.++.|+|||||+++++++...
T Consensus 163 ~~~~fD~V~~~~~-l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~ 207 (383)
T 4fsd_A 163 PDSSVDIVISNCV-CNLSTNKLALFKEIHRVLRDGGELYFSDVYAD 207 (383)
T ss_dssp CTTCEEEEEEESC-GGGCSCHHHHHHHHHHHEEEEEEEEEEEEEES
T ss_pred CCCCEEEEEECCC-HHCCCCHHHHHHHHHHHCCCCCEEEEEEECCC
T ss_conf 8997789988240-54277899999999997389978999995455
No 5
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=1.00 E-value=1 Score=122.61 Aligned_cols=103 Identities=15% Similarity=0.186 Sum_probs=87.4
Q ss_pred CCCEEEEECCCCCHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHCCC---CCEEEEECCCCCCCCCCCCCEEEECCCCCC
Q ss_conf 77759997999846899982248923289995399999999998099---926973024579899998008994554443
Q 006518 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGL---PAMIGSFASKQLPYPSLSFDMLHCARCGVD 329 (642)
Q Consensus 253 ~~r~VLDIGCG~G~~a~~La~~g~~~~sV~giD~s~~~i~~A~ergl---~~~~~~~da~~LPfpd~SFDlV~s~~~l~~ 329 (642)
+..+|||||||+|.++..+++.+ ...++++|.++.+++.++++.. .+.+...+...+++++++||+|+|..+ ++
T Consensus 93 ~~~~vLDiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~-l~ 169 (254)
T 1xtp_A 93 GTSRALDCGAGIGRITKNLLTKL--YATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETATLPPNTYDLIVIQWT-AI 169 (254)
T ss_dssp CCSEEEEETCTTTHHHHHTHHHH--CSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCCCCSSCEEEEEEESC-GG
T ss_pred CCCEEEEECCCCCHHHHHHHHHH--CCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCHHHCCCCCCCEEEEEECCH-HH
T ss_conf 89879997997579999999863--4879999599999999998720078329998568877899897679997231-45
Q ss_pred CC--CCHHHHHHHHHHCCCCCCEEEEEECCC
Q ss_conf 45--468999999975046791999995899
Q 006518 330 WD--QKDGILLLEVDRVLKPGGYFVWTSPLT 358 (642)
Q Consensus 330 ~~--~d~~~lL~Ei~RVLKPGG~Lvis~~~~ 358 (642)
+. .+...++.++.++|||||++++.++..
T Consensus 170 ~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 200 (254)
T 1xtp_A 170 YLTDADFVKFFKHCQQALTPNGYIFFKENCS 200 (254)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred HCCHHHHHHHHHHHHHHCCCCEEEEEEECCC
T ss_conf 2997899999999999639984999986677
No 6
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=1.00 E-value=1 Score=121.59 Aligned_cols=99 Identities=10% Similarity=-0.078 Sum_probs=81.2
Q ss_pred CCEEEEECCCCCHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHC-----------------CCCCEEEEECCCCCCCCC-
Q ss_conf 77599979998468999822489232899953999999999980-----------------999269730245798999-
Q 006518 254 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER-----------------GLPAMIGSFASKQLPYPS- 315 (642)
Q Consensus 254 ~r~VLDIGCG~G~~a~~La~~g~~~~sV~giD~s~~~i~~A~er-----------------gl~~~~~~~da~~LPfpd- 315 (642)
+.+|||+|||+|..+..|++++. .|+|+|.|+.|++.|+++ ..++.+.++|+..+++++
T Consensus 23 ~~~vLD~GCG~G~~~~~la~~g~---~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~~ 99 (203)
T 1pjz_A 23 GARVLVPLCGKSQDMSWLSGQGY---HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARDI 99 (203)
T ss_dssp TCEEEETTTCCSHHHHHHHHHCC---EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHHH
T ss_pred CCEEEEECCCCCHHHHHHHHCCC---EEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCC
T ss_conf 98799958989674999997899---699995889999999987068732134665433457862799775265882337
Q ss_pred CCCCEEEECCCCCCCCCCH--HHHHHHHHHCCCCCCEEEEEEC
Q ss_conf 9800899455444345468--9999999750467919999958
Q 006518 316 LSFDMLHCARCGVDWDQKD--GILLLEVDRVLKPGGYFVWTSP 356 (642)
Q Consensus 316 ~SFDlV~s~~~l~~~~~d~--~~lL~Ei~RVLKPGG~Lvis~~ 356 (642)
++||+|++..+ +++.+.. ..++.++.|+|||||++++...
T Consensus 100 ~~fD~v~~~~~-l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~ 141 (203)
T 1pjz_A 100 GHCAAFYDRAA-MIALPADMRERYVQHLEALMPQACSGLLITL 141 (203)
T ss_dssp HSEEEEEEESC-GGGSCHHHHHHHHHHHHHHSCSEEEEEEEEE
T ss_pred CCEEEEEECCC-HHHCCHHHHHHHHHHHHHHCCCCCEEEEEEE
T ss_conf 88799998712-4528999999999999997099958999997
No 7
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=1.00 E-value=1 Score=121.04 Aligned_cols=105 Identities=14% Similarity=0.168 Sum_probs=85.7
Q ss_pred CCCEEEEECCCCCHHHHHHHHCC-CCEEEEEEECCCHHHHHHHHHC----C--CCCEEEEECCCCCCCCCCCCCEEEECC
Q ss_conf 77759997999846899982248-9232899953999999999980----9--992697302457989999800899455
Q 006518 253 GVRTILDIGCGYGSFGAHLFSKE-LLTMCIANYEASGSQVQLTLER----G--LPAMIGSFASKQLPYPSLSFDMLHCAR 325 (642)
Q Consensus 253 ~~r~VLDIGCG~G~~a~~La~~g-~~~~sV~giD~s~~~i~~A~er----g--l~~~~~~~da~~LPfpd~SFDlV~s~~ 325 (642)
++.+|||+|||+|.++..|+++. .....|+|+|+|+.|++.|+++ + .++.+.++|+..+|++ .||+|++..
T Consensus 70 ~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~--~~d~v~~~~ 147 (261)
T 4gek_A 70 PGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIE--NASMVVLNF 147 (261)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCC--SEEEEEEES
T ss_pred CCCEEEEEECCCCHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCC--CCCCCEEEE
T ss_conf 979899994789989999998548899889999898999999998777524573079963332222334--345112565
Q ss_pred CCCCCCCCH--HHHHHHHHHCCCCCCEEEEEECCCCC
Q ss_conf 444345468--99999997504679199999589991
Q 006518 326 CGVDWDQKD--GILLLEVDRVLKPGGYFVWTSPLTNP 360 (642)
Q Consensus 326 ~l~~~~~d~--~~lL~Ei~RVLKPGG~Lvis~~~~~~ 360 (642)
+ +++.++. ..+|.+++|+|||||.|++++.....
T Consensus 148 ~-l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~~~ 183 (261)
T 4gek_A 148 T-LQFLEPSERQALLDKIYQGLNPGGALVLSEKFSFE 183 (261)
T ss_dssp C-GGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCS
T ss_pred E-EEECCCHHHHHHHHHHHHHCCCCCEEEEEECCCCC
T ss_conf 5-21067156769999999873998389999646778
No 8
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=1.00 E-value=1 Score=120.83 Aligned_cols=104 Identities=18% Similarity=0.194 Sum_probs=90.0
Q ss_pred CCCEEEEECCCCCHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHCC---CCCEEEEECCCCCCCCCCCCCEEEECCCCCC
Q ss_conf 7775999799984689998224892328999539999999999809---9926973024579899998008994554443
Q 006518 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---LPAMIGSFASKQLPYPSLSFDMLHCARCGVD 329 (642)
Q Consensus 253 ~~r~VLDIGCG~G~~a~~La~~g~~~~sV~giD~s~~~i~~A~erg---l~~~~~~~da~~LPfpd~SFDlV~s~~~l~~ 329 (642)
++.+|||||||+|.++..+++.. ...++++|.++.+++.++++. ..+.+...|...+|+++++||+|++..+ ++
T Consensus 55 ~~~~vLdiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~-l~ 131 (266)
T 3ujc_A 55 ENSKVLDIGSGLGGGCMYINEKY--GAHTHGIDICSNIVNMANERVSGNNKIIFEANDILTKEFPENNFDLIYSRDA-IL 131 (266)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCCCCTTCEEEEEEESC-GG
T ss_pred CCCEEEEECCCCCHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEEEHHHH-HH
T ss_conf 99999997898987899999973--9979999699999999999863589738997763458999985787768878-98
Q ss_pred CC--CCHHHHHHHHHHCCCCCCEEEEEECCCC
Q ss_conf 45--4689999999750467919999958999
Q 006518 330 WD--QKDGILLLEVDRVLKPGGYFVWTSPLTN 359 (642)
Q Consensus 330 ~~--~d~~~lL~Ei~RVLKPGG~Lvis~~~~~ 359 (642)
+. ++...++.++.|+|||||++++.++...
T Consensus 132 ~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 163 (266)
T 3ujc_A 132 ALSLENKNKLFQKCYKWLKPTGTLLITDYCAT 163 (266)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEEEES
T ss_pred HCCHHHHHHHHHHHHHHCCCCCEEEEEEECCC
T ss_conf 46968899999999998599988999972157
No 9
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=1.00 E-value=1 Score=120.78 Aligned_cols=104 Identities=24% Similarity=0.305 Sum_probs=88.7
Q ss_pred CCCEEEEECCCCCHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHC----CC--CCEEEEECCCCCCCCCCCCCEEEECCC
Q ss_conf 777599979998468999822489232899953999999999980----99--926973024579899998008994554
Q 006518 253 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARC 326 (642)
Q Consensus 253 ~~r~VLDIGCG~G~~a~~La~~g~~~~sV~giD~s~~~i~~A~er----gl--~~~~~~~da~~LPfpd~SFDlV~s~~~ 326 (642)
+..+|||||||+|.++..+++.. ...++++|.++.+++.++++ ++ .+.+..++...+|+++++||+|++..+
T Consensus 82 ~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 159 (297)
T 2o57_A 82 RQAKGLDLGAGYGGAARFLVRKF--GVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIWSQDA 159 (297)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEEEESC
T ss_pred CCCEEEEECCCCCHHHHHHHHHH--CCEEEEEECCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCEEEEEECCH
T ss_conf 99989996788998999999980--9979999699999999999999659975528997680028999997728985143
Q ss_pred CCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCC
Q ss_conf 443454689999999750467919999958999
Q 006518 327 GVDWDQKDGILLLEVDRVLKPGGYFVWTSPLTN 359 (642)
Q Consensus 327 l~~~~~d~~~lL~Ei~RVLKPGG~Lvis~~~~~ 359 (642)
+++.++...+|.++.|+|||||++++.++...
T Consensus 160 -l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 191 (297)
T 2o57_A 160 -FLHSPDKLKVFQECARVLKPRGVMAITDPMKE 191 (297)
T ss_dssp -GGGCSCHHHHHHHHHHHEEEEEEEEEEEEEEC
T ss_pred -HHHCCCHHHHHHHHHHHCCCCEEEEEEEECCC
T ss_conf -56469899999999987098808999971157
No 10
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=1.00 E-value=1 Score=120.21 Aligned_cols=147 Identities=18% Similarity=0.142 Sum_probs=107.8
Q ss_pred HHHHHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHC----CC-CCEEEEECCC
Q ss_conf 999999720245421125777599979998468999822489232899953999999999980----99-9269730245
Q 006518 235 HQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASK 309 (642)
Q Consensus 235 ~~i~~lL~l~~g~~l~~~~~r~VLDIGCG~G~~a~~La~~g~~~~sV~giD~s~~~i~~A~er----gl-~~~~~~~da~ 309 (642)
..+.+.+...++ .+|||+|||+|.++..+++.+.....++++|.++.+++.++++ ++ ++.+..++..
T Consensus 27 ~~~~~~~~~~~~--------~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~ 98 (219)
T 3dh0_A 27 EKVLKEFGLKEG--------MTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEEN 98 (219)
T ss_dssp HHHHHHHTCCTT--------CEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTT
T ss_pred HHHHHHHCCCCC--------CEEEEEECCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCC
T ss_conf 999997299999--------989997068888999999984998379999799999999999888739884799965611
Q ss_pred CCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
Q ss_conf 79899998008994554443454689999999750467919999958999144431277675454566643101327742
Q 006518 310 QLPYPSLSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVS 389 (642)
Q Consensus 310 ~LPfpd~SFDlV~s~~~l~~~~~d~~~lL~Ei~RVLKPGG~Lvis~~~~~~~~~lr~~E~~~~w~~ie~la~~lcW~ll~ 389 (642)
.+++++++||+|++..+ +++.++...++.++.++|||||++++.++.................+.+..+.+..+++.+.
T Consensus 99 ~~~~~~~~fD~v~~~~~-l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 177 (219)
T 3dh0_A 99 KIPLPDNTVDFIFMAFT-FHELSEPLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGR 177 (219)
T ss_dssp BCSSCSSCEEEEEEESC-GGGCSSHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEE
T ss_pred CCCCCCCCEEEEEEEHH-HHHCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCHHCCCCHHHHHHHHHHCCCEEEE
T ss_conf 28999877449971000-34158999999999998599819999970256655588611146999999999987997988
Q ss_pred E
Q ss_conf 1
Q 006518 390 Q 390 (642)
Q Consensus 390 ~ 390 (642)
.
T Consensus 178 ~ 178 (219)
T 3dh0_A 178 V 178 (219)
T ss_dssp E
T ss_pred E
T ss_conf 8
Done!