BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006522
(642 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 154/292 (52%), Gaps = 24/292 (8%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
++G+ G +YK + G T+VAV+RL E F++EVE I+ H N++
Sbjct: 45 ILGRGGFGKVYKGRLADG------TLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLL 98
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHE 468
RL+ F E+LL+ ++ NGS+ + L P +S PPL W R +IA G+ARGL Y+H+
Sbjct: 99 RLRGFCMTPTERLLVYPYMANGSVASCLRERP-ESQPPLDWPKRQRIALGSARGLAYLHD 157
Query: 469 YSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAIS 528
+ K +H ++K+ ILLD+E + FGL +L+ K+ + + G+ I I+
Sbjct: 158 HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD-----YKDXHVXXAVRGT-IGHIA 211
Query: 529 NVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTG-RLPDAG--PENDGKGLESLVRKAFR 585
YL+ K ++K DV+ +G++LLE++TG R D +D L V+ +
Sbjct: 212 PEYLST------GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLK 265
Query: 586 ERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 637
E++ L ++D L + + +V +AL CT+ P RP+M V L+
Sbjct: 266 EKK-LEALVDVDL-QGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 149/292 (51%), Gaps = 24/292 (8%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
++G+ G +YK + G +VAV+RL E F++EVE I+ H N++
Sbjct: 37 ILGRGGFGKVYKGRLADG------XLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLL 90
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHE 468
RL+ F E+LL+ ++ NGS+ + L P +S PPL W R +IA G+ARGL Y+H+
Sbjct: 91 RLRGFCMTPTERLLVYPYMANGSVASCLRERP-ESQPPLDWPKRQRIALGSARGLAYLHD 149
Query: 469 YSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAIS 528
+ K +H ++K+ ILLD+E + FGL +L+ + V I I+
Sbjct: 150 HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM------DYKDXHVXXAVRGXIGHIA 203
Query: 529 NVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTG-RLPDAG--PENDGKGLESLVRKAFR 585
YL+ K ++K DV+ +G++LLE++TG R D +D L V+ +
Sbjct: 204 PEYLST------GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLK 257
Query: 586 ERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 637
E++ L ++D L + + +V +AL CT+ P RP+M V L+
Sbjct: 258 EKK-LEALVDVDL-QGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 94/293 (32%), Positives = 140/293 (47%), Gaps = 30/293 (10%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG-DATWR--FKDFESEVEAIARVQHPN 406
+G+ G++YK G T VAV++L D T + F+ E++ +A+ QH N
Sbjct: 39 MGEGGFGVVYK-------GYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91
Query: 407 IVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYI 466
+V L F D+ L+ ++ NGSL L D PPL W R KIAQG A G+ ++
Sbjct: 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSC--LDGTPPLSWHMRCKIAQGAANGINFL 149
Query: 467 HEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISA 526
HE ++H +IKS ILLD+ IS FGL R +E + SRI
Sbjct: 150 HE---NHHIHRDIKSANILLDEAFTAKISDFGLAR---------ASEKFAQTVMXSRIVG 197
Query: 527 ISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE 586
+ Y+APEA + T K D+YSFG+VLLEI+TG LP + + L + + E
Sbjct: 198 -TTAYMAPEA--LRGEITPKSDIYSFGVVLLEIITG-LPAVDEHREPQLLLDIKEEIEDE 253
Query: 587 RRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 639
+ + + ID + V A + +A C RP ++ V + L +
Sbjct: 254 EKTIEDYIDKKMNDA--DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 304
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 139/293 (47%), Gaps = 30/293 (10%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG-DATWR--FKDFESEVEAIARVQHPN 406
+G+ G++YK G T VAV++L D T + F+ E++ +A+ QH N
Sbjct: 39 MGEGGFGVVYK-------GYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91
Query: 407 IVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYI 466
+V L F D+ L+ ++ NGSL L D PPL W R KIAQG A G+ ++
Sbjct: 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSC--LDGTPPLSWHMRCKIAQGAANGINFL 149
Query: 467 HEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISA 526
HE ++H +IKS ILLD+ IS FGL R +E + RI
Sbjct: 150 HE---NHHIHRDIKSANILLDEAFTAKISDFGLAR---------ASEKFAQTVMXXRIVG 197
Query: 527 ISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE 586
+ Y+APEA + T K D+YSFG+VLLEI+TG LP + + L + + E
Sbjct: 198 -TTAYMAPEA--LRGEITPKSDIYSFGVVLLEIITG-LPAVDEHREPQLLLDIKEEIEDE 253
Query: 587 RRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 639
+ + + ID + V A + +A C RP ++ V + L +
Sbjct: 254 EKTIEDYIDKKMNDA--DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 304
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/293 (32%), Positives = 140/293 (47%), Gaps = 30/293 (10%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG-DATWR--FKDFESEVEAIARVQHPN 406
+G+ G++YK G T VAV++L D T + F+ E++ +A+ QH N
Sbjct: 33 MGEGGFGVVYK-------GYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 85
Query: 407 IVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYI 466
+V L F D+ L+ ++ NGSL L D PPL W R KIAQG A G+ ++
Sbjct: 86 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSC--LDGTPPLSWHMRCKIAQGAANGINFL 143
Query: 467 HEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISA 526
HE ++H +IKS ILLD+ IS FGL R ++ IV GT +
Sbjct: 144 HE---NHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIV--GTTA---- 194
Query: 527 ISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE 586
Y+APEA + T K D+YSFG+VLLEI+TG LP + + L + + E
Sbjct: 195 ----YMAPEA--LRGEITPKSDIYSFGVVLLEIITG-LPAVDEHREPQLLLDIKEEIEDE 247
Query: 587 RRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 639
+ + + ID + V A + +A C RP ++ V + L +
Sbjct: 248 EKTIEDYIDKKMNDA--DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 298
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 107/215 (49%), Gaps = 27/215 (12%)
Query: 351 GKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG-DATWR--FKDFESEVEAIARVQHPNI 407
G+ G++YK G T VAV++L D T + F+ E++ A+ QH N+
Sbjct: 31 GEGGFGVVYK-------GYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENL 83
Query: 408 VRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIH 467
V L F D+ L+ + NGSL L D PPL W R KIAQG A G+ ++H
Sbjct: 84 VELLGFSSDGDDLCLVYVYXPNGSLLDRLSC--LDGTPPLSWHXRCKIAQGAANGINFLH 141
Query: 468 EYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAI 527
E ++H +IKS ILLD+ IS FGL R +E SRI
Sbjct: 142 E---NHHIHRDIKSANILLDEAFTAKISDFGLAR---------ASEKFAQXVXXSRIVG- 188
Query: 528 SNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTG 562
+ Y APEA + T K D+YSFG+VLLEI+TG
Sbjct: 189 TTAYXAPEA--LRGEITPKSDIYSFGVVLLEIITG 221
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 97/313 (30%), Positives = 158/313 (50%), Gaps = 34/313 (10%)
Query: 333 EGFSLELEDLLRAS-----AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATW 387
E + + L DL A+ +++G G +YK V+ G+ VA++R T +++
Sbjct: 25 ESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAK------VALKRRTP-ESSQ 77
Query: 388 RFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPL 447
++FE+E+E ++ +HP++V L F +E +LI ++ NG+L L+ ++ +
Sbjct: 78 GIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTM-SM 136
Query: 448 PWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTS 507
WE RL+I G ARGL Y+H R +H ++KS ILLD+ P I+ FG+++ GT
Sbjct: 137 SWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISK--KGTE 191
Query: 508 KVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDA 567
+ V GT Y+ PE I G + T+K DVYSFG+VL E+L R A
Sbjct: 192 LDQTHLXXVVKGTLG--------YIDPEYFIKG-RLTEKSDVYSFGVVLFEVLCAR--SA 240
Query: 568 GPENDGKGLESLVRKAFRERR--PLSEVIDPALVKEIHAKRQVLATF-HIALNCTELDPE 624
++ + + +L A L +++DP L +I + + L F A+ C L E
Sbjct: 241 IVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKI--RPESLRKFGDTAVKCLALSSE 298
Query: 625 FRPRMRTVSESLD 637
RP M V L+
Sbjct: 299 DRPSMGDVLWKLE 311
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 97/313 (30%), Positives = 158/313 (50%), Gaps = 34/313 (10%)
Query: 333 EGFSLELEDLLRAS-----AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATW 387
E + + L DL A+ +++G G +YK V+ G+ VA++R T +++
Sbjct: 25 ESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAK------VALKRRTP-ESSQ 77
Query: 388 RFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPL 447
++FE+E+E ++ +HP++V L F +E +LI ++ NG+L L+ ++ +
Sbjct: 78 GIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTM-SM 136
Query: 448 PWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTS 507
WE RL+I G ARGL Y+H R +H ++KS ILLD+ P I+ FG+++ GT
Sbjct: 137 SWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISK--KGTE 191
Query: 508 KVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDA 567
+ V GT Y+ PE I G + T+K DVYSFG+VL E+L R A
Sbjct: 192 LGQTHLXXVVKGTLG--------YIDPEYFIKG-RLTEKSDVYSFGVVLFEVLCAR--SA 240
Query: 568 GPENDGKGLESLVRKAFRERR--PLSEVIDPALVKEIHAKRQVLATF-HIALNCTELDPE 624
++ + + +L A L +++DP L +I + + L F A+ C L E
Sbjct: 241 IVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKI--RPESLRKFGDTAVKCLALSSE 298
Query: 625 FRPRMRTVSESLD 637
RP M V L+
Sbjct: 299 DRPSMGDVLWKLE 311
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 138/301 (45%), Gaps = 41/301 (13%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
V+GK G KV R +G V+ ++ L D + + F EV+ + ++HPN++
Sbjct: 17 VLGKGCFGQAIKVT-HRETG----EVMVMKELIRFDEETQ-RTFLKEVKVMRCLEHPNVL 70
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHE 468
+ Y + I+++I+ G+L + + S PW R+ A+ A G+ Y+H
Sbjct: 71 KFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQ----YPWSQRVSFAKDIASGMAYLHS 126
Query: 469 YSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNE---TIVTSGTGSRIS 525
+ +H ++ S L+ + + ++ FGL RL+ + T+ E ++ R +
Sbjct: 127 MN---IIHRDLNSHNCLVRENKNVVVADFGLARLM--VDEKTQPEGLRSLKKPDRKKRYT 181
Query: 526 AISNVY-LAPEARIYGSKFTQKCDVYSFGIVLLEILTGRL---PDAGPENDGKGLESLVR 581
+ N Y +APE I G + +K DV+SFGIVL EI+ GR+ PD P GL
Sbjct: 182 VVGNPYWMAPEM-INGRSYDEKVDVFSFGIVLCEII-GRVNADPDYLPRTMDFGLNV--- 236
Query: 582 KAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 641
+ F +R P+ F I + C +LDPE RP + L+ +++
Sbjct: 237 RGFLDRY-CPPNCPPSF-------------FPITVRCCDLDPEKRPSFVKLEHWLETLRM 282
Query: 642 Q 642
Sbjct: 283 H 283
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 112/234 (47%), Gaps = 40/234 (17%)
Query: 373 TVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL 432
T VAV+ L +G + F +E + ++QH +VRL A + +I++++ NGSL
Sbjct: 34 TKVAVKSLKQGSMS--PDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSL 90
Query: 433 YAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHP 492
L + S L L +A A G+ +I E R Y+H N+++ IL+ D L
Sbjct: 91 VDFLK---TPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRNLRAANILVSDTLSC 144
Query: 493 CISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSF 552
I+ FGL RL + NE G I + APEA YG+ FT K DV+SF
Sbjct: 145 KIADFGLARL------IEDNEYTAREGAKFPIK-----WTAPEAINYGT-FTIKSDVWSF 192
Query: 553 GIVLLEILT-GRLPDAG------------------PENDGKGLESLVRKAFRER 587
GI+L EI+T GR+P G P+N + L L+R ++ER
Sbjct: 193 GILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKER 246
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 124/263 (47%), Gaps = 43/263 (16%)
Query: 344 RASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ 403
R + +V + G +V +G +G T VAV+ L +G + F +E + ++Q
Sbjct: 21 RETLKLVERLGAGQFGEVWMGYYNGH---TKVAVKSLKQGSMS--PDAFLAEANLMKQLQ 75
Query: 404 HPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGL 463
H +VRL A + +I++++ NGSL L + S L L +A A G+
Sbjct: 76 HQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLK---TPSGIKLTINKLLDMAAQIAEGM 131
Query: 464 MYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSR 523
+I E R Y+H ++++ IL+ D L I+ FGL RL + NE G
Sbjct: 132 AFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARL------IEDNEXTAREGAKFP 182
Query: 524 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAG-------------- 568
I + APEA YG+ FT K DV+SFGI+L EI+T GR+P G
Sbjct: 183 IK-----WTAPEAINYGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY 236
Query: 569 ----PENDGKGLESLVRKAFRER 587
P+N + L L+R ++ER
Sbjct: 237 RMVRPDNCPEELYQLMRLCWKER 259
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 112/234 (47%), Gaps = 40/234 (17%)
Query: 373 TVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL 432
T VAV+ L +G + F +E + ++QH +VRL A + +I++++ NGSL
Sbjct: 46 TKVAVKSLKQGSMS--PDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSL 102
Query: 433 YAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHP 492
L + S L L +A A G+ +I E R Y+H ++++ IL+ D L
Sbjct: 103 VDFLK---TPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSC 156
Query: 493 CISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSF 552
I+ FGL RL + NE G I + APEA YG+ FT K DV+SF
Sbjct: 157 KIADFGLARL------IEDNEXTAREGAKFPIK-----WTAPEAINYGT-FTIKSDVWSF 204
Query: 553 GIVLLEILT-GRLPDAG------------------PENDGKGLESLVRKAFRER 587
GI+L EI+T GR+P G P+N + L L+R ++ER
Sbjct: 205 GILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKER 258
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 112/234 (47%), Gaps = 40/234 (17%)
Query: 373 TVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL 432
T VAV+ L +G + F +E + ++QH +VRL A + +I++++ NGSL
Sbjct: 44 TKVAVKSLKQGSMS--PDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSL 100
Query: 433 YAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHP 492
L + S L L +A A G+ +I E R Y+H ++++ IL+ D L
Sbjct: 101 VDFLK---TPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSC 154
Query: 493 CISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSF 552
I+ FGL RL + NE G I + APEA YG+ FT K DV+SF
Sbjct: 155 KIADFGLARL------IEDNEXTAREGAKFPIK-----WTAPEAINYGT-FTIKSDVWSF 202
Query: 553 GIVLLEILT-GRLPDAG------------------PENDGKGLESLVRKAFRER 587
GI+L EI+T GR+P G P+N + L L+R ++ER
Sbjct: 203 GILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKER 256
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 112/234 (47%), Gaps = 40/234 (17%)
Query: 373 TVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL 432
T VAV+ L +G + F +E + ++QH +VRL A + +I++++ NGSL
Sbjct: 38 TKVAVKSLKQGSMS--PDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSL 94
Query: 433 YAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHP 492
L + S L L +A A G+ +I E R Y+H ++++ IL+ D L
Sbjct: 95 VDFLK---TPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSC 148
Query: 493 CISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSF 552
I+ FGL RL + NE G I + APEA YG+ FT K DV+SF
Sbjct: 149 KIADFGLARL------IEDNEXTAREGAKFPIK-----WTAPEAINYGT-FTIKSDVWSF 196
Query: 553 GIVLLEILT-GRLPDAG------------------PENDGKGLESLVRKAFRER 587
GI+L EI+T GR+P G P+N + L L+R ++ER
Sbjct: 197 GILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKER 250
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 112/234 (47%), Gaps = 40/234 (17%)
Query: 373 TVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL 432
T VAV+ L +G + F +E + ++QH +VRL A + +I++++ NGSL
Sbjct: 48 TKVAVKSLKQGSMS--PDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSL 104
Query: 433 YAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHP 492
L + S L L +A A G+ +I E R Y+H ++++ IL+ D L
Sbjct: 105 VDFLK---TPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSC 158
Query: 493 CISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSF 552
I+ FGL RL + NE G I + APEA YG+ FT K DV+SF
Sbjct: 159 KIADFGLARL------IEDNEYTAREGAKFPIK-----WTAPEAINYGT-FTIKSDVWSF 206
Query: 553 GIVLLEILT-GRLPDAG------------------PENDGKGLESLVRKAFRER 587
GI+L EI+T GR+P G P+N + L L+R ++ER
Sbjct: 207 GILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKER 260
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 112/234 (47%), Gaps = 40/234 (17%)
Query: 373 TVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL 432
T VAV+ L +G + F +E + ++QH +VRL A + +I++++ NGSL
Sbjct: 40 TKVAVKSLKQGSMS--PDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSL 96
Query: 433 YAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHP 492
L + S L L +A A G+ +I E R Y+H ++++ IL+ D L
Sbjct: 97 VDFLK---TPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSC 150
Query: 493 CISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSF 552
I+ FGL RL + NE G I + APEA YG+ FT K DV+SF
Sbjct: 151 KIADFGLARL------IEDNEXTAREGAKFPIK-----WTAPEAINYGT-FTIKSDVWSF 198
Query: 553 GIVLLEILT-GRLPDAG------------------PENDGKGLESLVRKAFRER 587
GI+L EI+T GR+P G P+N + L L+R ++ER
Sbjct: 199 GILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKER 252
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 112/234 (47%), Gaps = 40/234 (17%)
Query: 373 TVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL 432
T VAV+ L +G + F +E + ++QH +VRL A + +I++++ NGSL
Sbjct: 39 TKVAVKSLKQGSMS--PDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSL 95
Query: 433 YAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHP 492
L + S L L +A A G+ +I E R Y+H ++++ IL+ D L
Sbjct: 96 VDFLK---TPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSC 149
Query: 493 CISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSF 552
I+ FGL RL + NE G I + APEA YG+ FT K DV+SF
Sbjct: 150 KIADFGLARL------IEDNEXTAREGAKFPIK-----WTAPEAINYGT-FTIKSDVWSF 197
Query: 553 GIVLLEILT-GRLPDAG------------------PENDGKGLESLVRKAFRER 587
GI+L EI+T GR+P G P+N + L L+R ++ER
Sbjct: 198 GILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKER 251
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 112/234 (47%), Gaps = 40/234 (17%)
Query: 373 TVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL 432
T VAV+ L +G + F +E + ++QH +VRL A + +I++++ NGSL
Sbjct: 43 TKVAVKSLKQGSMS--PDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSL 99
Query: 433 YAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHP 492
L + S L L +A A G+ +I E R Y+H ++++ IL+ D L
Sbjct: 100 VDFLK---TPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSC 153
Query: 493 CISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSF 552
I+ FGL RL + NE G I + APEA YG+ FT K DV+SF
Sbjct: 154 KIADFGLARL------IEDNEYTAREGAKFPIK-----WTAPEAINYGT-FTIKSDVWSF 201
Query: 553 GIVLLEILT-GRLPDAG------------------PENDGKGLESLVRKAFRER 587
GI+L EI+T GR+P G P+N + L L+R ++ER
Sbjct: 202 GILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKER 255
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 112/234 (47%), Gaps = 40/234 (17%)
Query: 373 TVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL 432
T VAV+ L +G + F +E + ++QH +VRL A + +I++++ NGSL
Sbjct: 44 TKVAVKSLKQGSMS--PDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSL 100
Query: 433 YAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHP 492
L + S L L +A A G+ +I E R Y+H ++++ IL+ D L
Sbjct: 101 VDFLK---TPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSC 154
Query: 493 CISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSF 552
I+ FGL RL + NE G I + APEA YG+ FT K DV+SF
Sbjct: 155 KIADFGLARL------IEDNEYTAREGAKFPIK-----WTAPEAINYGT-FTIKSDVWSF 202
Query: 553 GIVLLEILT-GRLPDAG------------------PENDGKGLESLVRKAFRER 587
GI+L EI+T GR+P G P+N + L L+R ++ER
Sbjct: 203 GILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKER 256
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 112/234 (47%), Gaps = 40/234 (17%)
Query: 373 TVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL 432
T VAV+ L +G + F +E + ++QH +VRL A + +I++++ NGSL
Sbjct: 38 TKVAVKSLKQGSMS--PDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSL 94
Query: 433 YAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHP 492
L + S L L +A A G+ +I E R Y+H ++++ IL+ D L
Sbjct: 95 VDFLK---TPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSC 148
Query: 493 CISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSF 552
I+ FGL RL + NE G I + APEA YG+ FT K DV+SF
Sbjct: 149 KIADFGLARL------IEDNEXTAREGAKFPIK-----WTAPEAINYGT-FTIKSDVWSF 196
Query: 553 GIVLLEILT-GRLPDAG------------------PENDGKGLESLVRKAFRER 587
GI+L EI+T GR+P G P+N + L L+R ++ER
Sbjct: 197 GILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKER 250
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 112/234 (47%), Gaps = 40/234 (17%)
Query: 373 TVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL 432
T VAV+ L +G + F +E + ++QH +VRL A + +I++++ NGSL
Sbjct: 38 TKVAVKSLKQGSMS--PDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSL 94
Query: 433 YAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHP 492
L + S L L +A A G+ +I E R Y+H ++++ IL+ D L
Sbjct: 95 VDFLK---TPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSC 148
Query: 493 CISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSF 552
I+ FGL RL + NE G I + APEA YG+ FT K DV+SF
Sbjct: 149 KIADFGLARL------IEDNEYTAREGAKFPIK-----WTAPEAINYGT-FTIKSDVWSF 196
Query: 553 GIVLLEILT-GRLPDAG------------------PENDGKGLESLVRKAFRER 587
GI+L EI+T GR+P G P+N + L L+R ++ER
Sbjct: 197 GILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKER 250
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 112/234 (47%), Gaps = 40/234 (17%)
Query: 373 TVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL 432
T VAV+ L +G + F +E + ++QH +VRL A + +I++++ NGSL
Sbjct: 33 TKVAVKSLKQGSMS--PDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSL 89
Query: 433 YAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHP 492
L + S L L +A A G+ +I E R Y+H ++++ IL+ D L
Sbjct: 90 VDFLK---TPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSC 143
Query: 493 CISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSF 552
I+ FGL RL + NE G I + APEA YG+ FT K DV+SF
Sbjct: 144 KIADFGLARL------IEDNEYTAREGAKFPIK-----WTAPEAINYGT-FTIKSDVWSF 191
Query: 553 GIVLLEILT-GRLPDAG------------------PENDGKGLESLVRKAFRER 587
GI+L EI+T GR+P G P+N + L L+R ++ER
Sbjct: 192 GILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKER 245
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 98/192 (51%), Gaps = 17/192 (8%)
Query: 375 VAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLY 433
VAV+ L E D R +F EV + R++HPNIV ++++++ GSLY
Sbjct: 63 VAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLY 122
Query: 434 AALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPC 493
LH S + L RL +A A+G+ Y+H +P VH N+KS +L+D +
Sbjct: 123 RLLHK--SGAREQLDERRRLSMAYDVAKGMNYLHNRNP-PIVHRNLKSPNLLVDKKYTVK 179
Query: 494 ISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFG 553
+ FGL+RL K T ++S + +A + ++APE + +K DVYSFG
Sbjct: 180 VCDFGLSRL--------KASTFLSSKS----AAGTPEWMAPEV-LRDEPSNEKSDVYSFG 226
Query: 554 IVLLEILTGRLP 565
++L E+ T + P
Sbjct: 227 VILWELATLQQP 238
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 141/295 (47%), Gaps = 42/295 (14%)
Query: 344 RASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ 403
R S ++ + NG +V +G +G T VA++ L G T + F E + + +++
Sbjct: 8 RESLQLIKRLGNGQFGEVWMGTWNG---NTKVAIKTLKPG--TMSPESFLEEAQIMKKLK 62
Query: 404 HPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGL 463
H +V+L A + + ++++++ GSL L G +L LP + +A A G+
Sbjct: 63 HDKLVQLYAVV-SEEPIYIVTEYMNKGSLLDFLKDGEGRALK-LP--NLVDMAAQVAAGM 118
Query: 464 MYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSR 523
YI + Y+H +++S IL+ + L I+ FGL RL + NE G
Sbjct: 119 AYIERMN---YIHRDLRSANILVGNGLICKIADFGLARL------IEDNEXTARQGAKFP 169
Query: 524 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRK 582
I + APEA +YG +FT K DV+SFGI+L E++T GR+P G N+ + LE V +
Sbjct: 170 IK-----WTAPEAALYG-RFTIKSDVWSFGILLTELVTKGRVPYPG-MNNREVLEQ-VER 221
Query: 583 AFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 637
+R P + ++ + ++C + DPE RP + L+
Sbjct: 222 GYRMPCP---------------QDCPISLHELMIHCWKKDPEERPTFEYLQSFLE 261
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 139/295 (47%), Gaps = 41/295 (13%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAP-TVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNI 407
V+G + G +V GR G + VA++ L G + ++F SE + + +HPNI
Sbjct: 21 VIGAGEFG---EVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNI 77
Query: 408 VRLKAFYYANDEKLLISDFIRNGSL--YAALHAGPSDSLPPLPWEARLKIAQGTARGLMY 465
+RL+ + +++++F+ NG+L + L+ G + + + +G A G+ Y
Sbjct: 78 IRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVI------QLVGMLRGIASGMRY 131
Query: 466 IHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRIS 525
+ E S YVH ++ + IL++ L +S FGL+R L S ++ TS G +I
Sbjct: 132 LAEMS---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENS----SDPTYTSSLGGKIP 184
Query: 526 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAF 584
+ APEA I KFT D +S+GIV+ E+++ G P N + + + + + +
Sbjct: 185 I---RWTAPEA-IAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSN--QDVINAIEQDY 238
Query: 585 RERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 639
R P P +H + L+C + D RPR V +LD++
Sbjct: 239 RLPPP------PDCPTSLH---------QLMLDCWQKDRNARPRFPQVVSALDKM 278
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 117/263 (44%), Gaps = 50/263 (19%)
Query: 385 ATWRFKD--------------FESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNG 430
A WR KD F E+ ++RV HPNIV+L + + L+ ++ G
Sbjct: 28 AKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKL--YGACLNPVCLVMEYAEGG 85
Query: 431 SLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDEL 490
SLY LH ++ LP + ++G+ Y+H P+ +H ++K +LL
Sbjct: 86 SLYNVLHG--AEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLL---- 139
Query: 491 HPCISGFGLNRLLP-GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDV 549
++G + ++ GT+ +T +T+ GS ++APE GS +++KCDV
Sbjct: 140 ---VAGGTVLKICDFGTA--CDIQTHMTNNKGS------AAWMAPEV-FEGSNYSEKCDV 187
Query: 550 YSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVL 609
+S+GI+L E++T R P + + AFR + P L+K + + L
Sbjct: 188 FSWGIILWEVITRRKP----------FDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESL 237
Query: 610 ATFHIALNCTELDPEFRPRMRTV 632
T C DP RP M +
Sbjct: 238 MT-----RCWSKDPSQRPSMEEI 255
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 117/263 (44%), Gaps = 50/263 (19%)
Query: 385 ATWRFKD--------------FESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNG 430
A WR KD F E+ ++RV HPNIV+L + + L+ ++ G
Sbjct: 27 AKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKL--YGACLNPVCLVMEYAEGG 84
Query: 431 SLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDEL 490
SLY LH ++ LP + ++G+ Y+H P+ +H ++K +LL
Sbjct: 85 SLYNVLHG--AEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLL---- 138
Query: 491 HPCISGFGLNRLLP-GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDV 549
++G + ++ GT+ +T +T+ GS ++APE GS +++KCDV
Sbjct: 139 ---VAGGTVLKICDFGTA--CDIQTHMTNNKGS------AAWMAPEV-FEGSNYSEKCDV 186
Query: 550 YSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVL 609
+S+GI+L E++T R P + + AFR + P L+K + + L
Sbjct: 187 FSWGIILWEVITRRKP----------FDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESL 236
Query: 610 ATFHIALNCTELDPEFRPRMRTV 632
T C DP RP M +
Sbjct: 237 MT-----RCWSKDPSQRPSMEEI 254
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 129/270 (47%), Gaps = 37/270 (13%)
Query: 373 TVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL 432
+ VA++ L G + ++F SE + + +HPNI+RL+ + +++++F+ NG+L
Sbjct: 45 SCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGAL 104
Query: 433 --YAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDEL 490
+ L+ G + + + +G A G+ Y+ E S YVH ++ + IL++ L
Sbjct: 105 DSFLRLNDGQFTVI------QLVGMLRGIASGMRYLAEMS---YVHRDLAARNILVNSNL 155
Query: 491 HPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVY 550
+S FGL+R L S ++ TS G +I + APEA I KFT D +
Sbjct: 156 VCKVSDFGLSRFLEENS----SDPTETSSLGGKIPI---RWTAPEA-IAFRKFTSASDAW 207
Query: 551 SFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVL 609
S+GIV+ E+++ G P N + + + + + +R P P +H
Sbjct: 208 SYGIVMWEVMSFGERPYWDMSN--QDVINAIEQDYRLPPP------PDCPTSLH------ 253
Query: 610 ATFHIALNCTELDPEFRPRMRTVSESLDRV 639
+ L+C + D RPR V +LD++
Sbjct: 254 ---QLMLDCWQKDRNARPRFPQVVSALDKM 280
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 113/234 (48%), Gaps = 40/234 (17%)
Query: 373 TVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL 432
T VAV+ L +G + F +E + ++QH +VRL A + +I++++ NGSL
Sbjct: 38 TKVAVKSLKQGSMS--PDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSL 94
Query: 433 YAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHP 492
L + S L L +A A G+ +I E R Y+H ++++ IL+ D L
Sbjct: 95 VDFLK---TPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSC 148
Query: 493 CISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSF 552
I+ FGL RL+ T+ G++ + APEA YG+ FT K DV+SF
Sbjct: 149 KIADFGLARLIEDAEX--------TAREGAKFPI---KWTAPEAINYGT-FTIKSDVWSF 196
Query: 553 GIVLLEILT-GRLPDAG------------------PENDGKGLESLVRKAFRER 587
GI+L EI+T GR+P G P+N + L L+R ++ER
Sbjct: 197 GILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKER 250
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 125/266 (46%), Gaps = 33/266 (12%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
VA++ L G + +DF SE + + HPN++ L+ + ++I++F+ NGSL +
Sbjct: 64 VAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDS 123
Query: 435 ALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCI 494
L + + +G A G+ Y+ + + YVH ++ + IL++ L +
Sbjct: 124 FLRQNDGQ----FTVIQLVGMLRGIAAGMKYLADMN---YVHRDLAARNILVNSNLVCKV 176
Query: 495 SGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGI 554
S FGL+R L + ++ TS G +I + APEA Y KFT DV+S+GI
Sbjct: 177 SDFGLSRFLEDDT----SDPTYTSALGGKIPI---RWTAPEAIQY-RKFTSASDVWSYGI 228
Query: 555 VLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFH 613
V+ E+++ G P N + + + + + +R P+ P+ A
Sbjct: 229 VMWEVMSYGERPYWDMTN--QDVINAIEQDYRLPPPMDC---PS------------ALHQ 271
Query: 614 IALNCTELDPEFRPRMRTVSESLDRV 639
+ L+C + D RP+ + +LD++
Sbjct: 272 LMLDCWQKDRNHRPKFGQIVNTLDKM 297
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 143/324 (44%), Gaps = 49/324 (15%)
Query: 318 TDEEEGQKGKFFIIDEGFSLELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTV-VA 376
T EE G+ G+ F+ E+E ++G +G +V GR G V VA
Sbjct: 31 TYEEPGRAGR------SFTREIEASRIHIEKIIGSGDSG---EVCYGRLRVPGQRDVPVA 81
Query: 377 VRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL--YA 434
++ L G + +DF SE + + HPNI+RL+ +++++++ NGSL +
Sbjct: 82 IKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFL 141
Query: 435 ALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCI 494
H G + + + +G G+ Y+ + YVH ++ + +L+D L +
Sbjct: 142 RTHDGQFTIM------QLVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKV 192
Query: 495 SGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGI 554
S FGL+R+L + + TG +I + APEA I F+ DV+SFG+
Sbjct: 193 SDFGLSRVL------EDDPDAAXTTTGGKIPI---RWTAPEA-IAFRTFSSASDVWSFGV 242
Query: 555 VLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFH 613
V+ E+L G P N + + S V + +R PA + HA Q++
Sbjct: 243 VMWEVLAYGERPYWNMTN--RDVISSVEEGYRL---------PAPMGCPHALHQLM---- 287
Query: 614 IALNCTELDPEFRPRMRTVSESLD 637
L+C D RPR + LD
Sbjct: 288 --LDCWHKDRAQRPRFSQIVSVLD 309
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 143/324 (44%), Gaps = 49/324 (15%)
Query: 318 TDEEEGQKGKFFIIDEGFSLELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTV-VA 376
T EE G+ G+ F+ E+E ++G +G +V GR G V VA
Sbjct: 31 TYEEPGRAGR------SFTREIEASRIHIEKIIGSGDSG---EVCYGRLRVPGQRDVPVA 81
Query: 377 VRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL--YA 434
++ L G + +DF SE + + HPNI+RL+ +++++++ NGSL +
Sbjct: 82 IKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFL 141
Query: 435 ALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCI 494
H G + + + +G G+ Y+ + YVH ++ + +L+D L +
Sbjct: 142 RTHDGQFTIM------QLVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKV 192
Query: 495 SGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGI 554
S FGL+R+L + + TG +I + APEA I F+ DV+SFG+
Sbjct: 193 SDFGLSRVL------EDDPDAAYTTTGGKIPI---RWTAPEA-IAFRTFSSASDVWSFGV 242
Query: 555 VLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFH 613
V+ E+L G P N + + S V + +R PA + HA Q++
Sbjct: 243 VMWEVLAYGERPYWNMTN--RDVISSVEEGYRL---------PAPMGCPHALHQLM---- 287
Query: 614 IALNCTELDPEFRPRMRTVSESLD 637
L+C D RPR + LD
Sbjct: 288 --LDCWHKDRAQRPRFSQIVSVLD 309
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 124/266 (46%), Gaps = 33/266 (12%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
VA++ L G + +DF SE + + HPN++ L+ + ++I++F+ NGSL +
Sbjct: 38 VAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDS 97
Query: 435 ALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCI 494
L + + +G A G+ Y+ + + YVH + + IL++ L +
Sbjct: 98 FLRQNDGQ----FTVIQLVGMLRGIAAGMKYLADMN---YVHRALAARNILVNSNLVCKV 150
Query: 495 SGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGI 554
S FGL+R L + ++ TS G +I + APEA Y KFT DV+S+GI
Sbjct: 151 SDFGLSRFLEDDT----SDPTYTSALGGKIPI---RWTAPEAIQY-RKFTSASDVWSYGI 202
Query: 555 VLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFH 613
V+ E+++ G P N + + + + + +R P+ P+ A
Sbjct: 203 VMWEVMSYGERPYWDMTN--QDVINAIEQDYRLPPPMD---CPS------------ALHQ 245
Query: 614 IALNCTELDPEFRPRMRTVSESLDRV 639
+ L+C + D RP+ + +LD++
Sbjct: 246 LMLDCWQKDRNHRPKFGQIVNTLDKM 271
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 122/273 (44%), Gaps = 49/273 (17%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
VA++ L G + +DF E + + HPNI+RL+ + +++++++ NGSL +
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 435 ALHAGPSDSLPPLPWEARLKIAQ------GTARGLMYIHEYSPRKYVHGNIKSTKILLDD 488
L +A+ + Q G A G+ Y+ S YVH ++ + IL++
Sbjct: 136 FLRKH----------DAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINS 182
Query: 489 ELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCD 548
L +S FGL+R+L E + +R I + +PEA Y KFT D
Sbjct: 183 NLVCKVSDFGLSRVL---------EDDPEAAYTTRGGKIPIRWTSPEAIAY-RKFTSASD 232
Query: 549 VYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVID-PALVKEIHAKR 606
V+S+GIVL E+++ G P N V KA E L +D PA
Sbjct: 233 VWSYGIVLWEVMSYGERPYWEMSNQD------VIKAVDEGYRLPPPMDCPA--------- 277
Query: 607 QVLATFHIALNCTELDPEFRPRMRTVSESLDRV 639
A + + L+C + D RP+ + LD++
Sbjct: 278 ---ALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 122/273 (44%), Gaps = 49/273 (17%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
VA++ L G + +DF E + + HPNI+RL+ + +++++++ NGSL +
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 435 ALHAGPSDSLPPLPWEARLKIAQ------GTARGLMYIHEYSPRKYVHGNIKSTKILLDD 488
L +A+ + Q G A G+ Y+ S YVH ++ + IL++
Sbjct: 136 FLRKH----------DAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINS 182
Query: 489 ELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCD 548
L +S FGL+R+L E + +R I + +PEA Y KFT D
Sbjct: 183 NLVCKVSDFGLSRVL---------EDDPEAAYTTRGGKIPIRWTSPEAIAY-RKFTSASD 232
Query: 549 VYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVID-PALVKEIHAKR 606
V+S+GIVL E+++ G P N V KA E L +D PA
Sbjct: 233 VWSYGIVLWEVMSYGERPYWEMSNQD------VIKAVDEGYRLPPPMDCPA--------- 277
Query: 607 QVLATFHIALNCTELDPEFRPRMRTVSESLDRV 639
A + + L+C + D RP+ + LD++
Sbjct: 278 ---ALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 126/268 (47%), Gaps = 43/268 (16%)
Query: 373 TVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL 432
T VAV+ + G + + F +E + +QH +V+L A + +I++F+ GSL
Sbjct: 40 TKVAVKTMKPGSMS--VEAFLAEANVMKTLQHDKLVKLHAVV-TKEPIYIITEFMAKGSL 96
Query: 433 YAALHA--GPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDEL 490
L + G LP L + + A G+ +I + R Y+H ++++ IL+ L
Sbjct: 97 LDFLKSDEGSKQPLPKL-----IDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASL 148
Query: 491 HPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVY 550
I+ FGL R+ + NE G I + APEA +GS FT K DV+
Sbjct: 149 VCKIADFGLARV------IEDNEYTAREGAKFPIK-----WTAPEAINFGS-FTIKSDVW 196
Query: 551 SFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVL 609
SFGI+L+EI+T GR+P G N + + +L R +R RP + +E+
Sbjct: 197 SFGILLMEIVTYGRIPYPGMSNP-EVIRALER-GYRMPRPEN------CPEEL------- 241
Query: 610 ATFHIALNCTELDPEFRPRMRTVSESLD 637
++I + C + PE RP + LD
Sbjct: 242 --YNIMMRCWKNRPEERPTFEYIQSVLD 267
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 122/273 (44%), Gaps = 49/273 (17%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
VA++ L G + +DF E + + HPNI+RL+ + +++++++ NGSL +
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 435 ALHAGPSDSLPPLPWEARLKIAQ------GTARGLMYIHEYSPRKYVHGNIKSTKILLDD 488
L +A+ + Q G A G+ Y+ S YVH ++ + IL++
Sbjct: 136 FLRKH----------DAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINS 182
Query: 489 ELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCD 548
L +S FGL+R+L E + +R I + +PEA Y KFT D
Sbjct: 183 NLVCKVSDFGLSRVL---------EDDPEAAYTTRGGKIPIRWTSPEAIAY-RKFTSASD 232
Query: 549 VYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVID-PALVKEIHAKR 606
V+S+GIVL E+++ G P N V KA E L +D PA
Sbjct: 233 VWSYGIVLWEVMSYGERPYWEMSNQD------VIKAVDEGYRLPPPMDCPA--------- 277
Query: 607 QVLATFHIALNCTELDPEFRPRMRTVSESLDRV 639
A + + L+C + D RP+ + LD++
Sbjct: 278 ---ALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 122/273 (44%), Gaps = 49/273 (17%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
VA++ L G + +DF E + + HPNI+RL+ + +++++++ NGSL +
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 435 ALHAGPSDSLPPLPWEARLKIAQ------GTARGLMYIHEYSPRKYVHGNIKSTKILLDD 488
L +A+ + Q G A G+ Y+ S YVH ++ + IL++
Sbjct: 136 FLRKH----------DAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINS 182
Query: 489 ELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCD 548
L +S FGL+R+L E + +R I + +PEA Y KFT D
Sbjct: 183 NLVCKVSDFGLSRVL---------EDDPEAAYTTRGGKIPIRWTSPEAIAY-RKFTSASD 232
Query: 549 VYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVID-PALVKEIHAKR 606
V+S+GIVL E+++ G P N V KA E L +D PA
Sbjct: 233 VWSYGIVLWEVMSYGERPYWEMSNQD------VIKAVDEGYRLPPPMDCPA--------- 277
Query: 607 QVLATFHIALNCTELDPEFRPRMRTVSESLDRV 639
A + + L+C + D RP+ + LD++
Sbjct: 278 ---ALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 122/273 (44%), Gaps = 49/273 (17%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
VA++ L G + +DF E + + HPNI+RL+ + +++++++ NGSL +
Sbjct: 74 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 133
Query: 435 ALHAGPSDSLPPLPWEARLKIAQ------GTARGLMYIHEYSPRKYVHGNIKSTKILLDD 488
L +A+ + Q G A G+ Y+ S YVH ++ + IL++
Sbjct: 134 FLRKH----------DAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINS 180
Query: 489 ELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCD 548
L +S FGL+R+L E + +R I + +PEA Y KFT D
Sbjct: 181 NLVCKVSDFGLSRVL---------EDDPEAAYTTRGGKIPIRWTSPEAIAY-RKFTSASD 230
Query: 549 VYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVID-PALVKEIHAKR 606
V+S+GIVL E+++ G P N V KA E L +D PA
Sbjct: 231 VWSYGIVLWEVMSYGERPYWEMSNQD------VIKAVDEGYRLPPPMDCPA--------- 275
Query: 607 QVLATFHIALNCTELDPEFRPRMRTVSESLDRV 639
A + + L+C + D RP+ + LD++
Sbjct: 276 ---ALYQLMLDCWQKDRNNRPKFEQIVSILDKL 305
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 124/268 (46%), Gaps = 43/268 (16%)
Query: 373 TVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL 432
T VAV+ + G + + F +E + +QH +V+L A + +I++F+ GSL
Sbjct: 213 TKVAVKTMKPGSMS--VEAFLAEANVMKTLQHDKLVKLHAVV-TKEPIYIITEFMAKGSL 269
Query: 433 YAALHA--GPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDEL 490
L + G LP L + + A G+ +I + R Y+H ++++ IL+ L
Sbjct: 270 LDFLKSDEGSKQPLPKL-----IDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASL 321
Query: 491 HPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVY 550
I+ FGL R+ + NE G I + APEA +GS FT K DV+
Sbjct: 322 VCKIADFGLARV------IEDNEYTAREGAKFPIK-----WTAPEAINFGS-FTIKSDVW 369
Query: 551 SFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVL 609
SFGI+L+EI+T GR+P G N + + +L R +R RP E L
Sbjct: 370 SFGILLMEIVTYGRIPYPGMSNP-EVIRALER-GYRMPRP--ENCPEEL----------- 414
Query: 610 ATFHIALNCTELDPEFRPRMRTVSESLD 637
++I + C + PE RP + LD
Sbjct: 415 --YNIMMRCWKNRPEERPTFEYIQSVLD 440
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 122/273 (44%), Gaps = 49/273 (17%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
VA++ L G + +DF E + + HPNI+RL+ + +++++++ NGSL +
Sbjct: 64 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 123
Query: 435 ALHAGPSDSLPPLPWEARLKIAQ------GTARGLMYIHEYSPRKYVHGNIKSTKILLDD 488
L +A+ + Q G A G+ Y+ S YVH ++ + IL++
Sbjct: 124 FLRKH----------DAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINS 170
Query: 489 ELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCD 548
L +S FGL+R+L E + +R I + +PEA Y KFT D
Sbjct: 171 NLVCKVSDFGLSRVL---------EDDPEAAYTTRGGKIPIRWTSPEAIAY-RKFTSASD 220
Query: 549 VYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVID-PALVKEIHAKR 606
V+S+GIVL E+++ G P N V KA E L +D PA
Sbjct: 221 VWSYGIVLWEVMSYGERPYWEMSNQD------VIKAVDEGYRLPPPMDCPA--------- 265
Query: 607 QVLATFHIALNCTELDPEFRPRMRTVSESLDRV 639
A + + L+C + D RP+ + LD++
Sbjct: 266 ---ALYQLMLDCWQKDRNNRPKFEQIVSILDKL 295
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 121/273 (44%), Gaps = 49/273 (17%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
VA++ L G + +DF E + + HPNI+RL+ + +++++++ NGSL +
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 435 ALHAGPSDSLPPLPWEARLKIAQ------GTARGLMYIHEYSPRKYVHGNIKSTKILLDD 488
L +A+ + Q G A G+ Y+ S YVH ++ + IL++
Sbjct: 136 FLRKH----------DAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINS 182
Query: 489 ELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCD 548
L +S FGL R+L E + +R I + +PEA Y KFT D
Sbjct: 183 NLVCKVSDFGLGRVL---------EDDPEAAYTTRGGKIPIRWTSPEAIAY-RKFTSASD 232
Query: 549 VYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVID-PALVKEIHAKR 606
V+S+GIVL E+++ G P N V KA E L +D PA
Sbjct: 233 VWSYGIVLWEVMSYGERPYWEMSNQD------VIKAVDEGYRLPPPMDCPA--------- 277
Query: 607 QVLATFHIALNCTELDPEFRPRMRTVSESLDRV 639
A + + L+C + D RP+ + LD++
Sbjct: 278 ---ALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 95/192 (49%), Gaps = 17/192 (8%)
Query: 375 VAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLY 433
VAV+ L E D R +F EV + R++HPNIV ++++++ GSLY
Sbjct: 63 VAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLY 122
Query: 434 AALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPC 493
LH S + L RL +A A+G+ Y+H +P VH ++KS +L+D +
Sbjct: 123 RLLHK--SGAREQLDERRRLSMAYDVAKGMNYLHNRNP-PIVHRDLKSPNLLVDKKYTVK 179
Query: 494 ISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFG 553
+ FGL+RL + S+ +A + ++APE + +K DVYSFG
Sbjct: 180 VCDFGLSRLK------------ASXFLXSKXAAGTPEWMAPEV-LRDEPSNEKSDVYSFG 226
Query: 554 IVLLEILTGRLP 565
++L E+ T + P
Sbjct: 227 VILWELATLQQP 238
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 122/273 (44%), Gaps = 49/273 (17%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
VA++ L G + +DF E + + HPNI+RL+ + +++++++ NGSL +
Sbjct: 47 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 106
Query: 435 ALHAGPSDSLPPLPWEARLKIAQ------GTARGLMYIHEYSPRKYVHGNIKSTKILLDD 488
L +A+ + Q G A G+ Y+ S YVH ++ + IL++
Sbjct: 107 FLRKH----------DAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINS 153
Query: 489 ELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCD 548
L +S FGL+R+L E + +R I + +PEA Y KFT D
Sbjct: 154 NLVCKVSDFGLSRVL---------EDDPEAAYTTRGGKIPIRWTSPEAIAY-RKFTSASD 203
Query: 549 VYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVID-PALVKEIHAKR 606
V+S+GIVL E+++ G P N V KA E L +D PA
Sbjct: 204 VWSYGIVLWEVMSYGERPYWEMSNQD------VIKAVDEGYRLPPPMDCPA--------- 248
Query: 607 QVLATFHIALNCTELDPEFRPRMRTVSESLDRV 639
A + + L+C + D RP+ + LD++
Sbjct: 249 ---ALYQLMLDCWQKDRNNRPKFEQIVSILDKL 278
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 121/273 (44%), Gaps = 49/273 (17%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
VA++ L G + +DF E + + HPNI+RL+ + +++++++ NGSL +
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 435 ALHAGPSDSLPPLPWEARLKIAQ------GTARGLMYIHEYSPRKYVHGNIKSTKILLDD 488
L +A+ + Q G A G+ Y+ S YVH ++ + IL++
Sbjct: 136 FLRKH----------DAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINS 182
Query: 489 ELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCD 548
L +S FGL R+L E + +R I + +PEA Y KFT D
Sbjct: 183 NLVCKVSDFGLARVL---------EDDPEAAYTTRGGKIPIRWTSPEAIAY-RKFTSASD 232
Query: 549 VYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVID-PALVKEIHAKR 606
V+S+GIVL E+++ G P N V KA E L +D PA
Sbjct: 233 VWSYGIVLWEVMSYGERPYWEMSNQD------VIKAVDEGYRLPPPMDCPA--------- 277
Query: 607 QVLATFHIALNCTELDPEFRPRMRTVSESLDRV 639
A + + L+C + D RP+ + LD++
Sbjct: 278 ---ALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 72/138 (52%), Gaps = 3/138 (2%)
Query: 111 NATNLVYLDLAHNSFCGPIPDRIKTLKNLTHXXXXXXXXXXXXPEFLLDLRALTGTLNLS 170
N ++++LD+++N G IP I ++ L P+ + DLR L L+LS
Sbjct: 627 NNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLN-ILDLS 685
Query: 171 FNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGLCGFPLQSP 230
N+ G+IP+ ++ +DL NNNLSG IP++G P F NPGLCG+PL P
Sbjct: 686 SNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPL--P 743
Query: 231 CPEPENPKVHANPEVEDG 248
+P N +A+ + G
Sbjct: 744 RCDPSNADGYAHHQRSHG 761
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 60/125 (48%), Gaps = 7/125 (5%)
Query: 101 FSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHXXXXXXXXXXXXPEFLLDL 160
F+ IP L N + LV L L+ N G IP + +L L P+ L+ +
Sbjct: 403 FTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYV 462
Query: 161 RALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQ-VG-----SLLNQGPT 214
+ L TL L FN +G+IP + + + L NN L+GEIP+ +G ++L
Sbjct: 463 KTLE-TLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNN 521
Query: 215 AFSGN 219
+FSGN
Sbjct: 522 SFSGN 526
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Query: 101 FSKPIPANLFN-ATNLVYLDLAHNSFCGPI-PDRIKTLKN-LTHXXXXXXXXXXXXPEFL 157
FS +P +L N + +L+ LDL+ N+F GPI P+ + KN L P L
Sbjct: 352 FSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTL 411
Query: 158 LDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQ 204
+ L +L+LSFN SG IP G + L L N L GEIPQ
Sbjct: 412 SNCSELV-SLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQ 457
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 57/140 (40%), Gaps = 1/140 (0%)
Query: 64 RNRVTSLYLPNRNLTGYMPXXXXXXXXXXXXXXXXXXFSKPIPANLFNATNLVYLDLAHN 123
+N + LYL N TG +P S IP++L + + L L L N
Sbjct: 390 KNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLN 449
Query: 124 SFCGPIPDRIKTLKNLTHXXXXXXXXXXXXPEFLLDLRALTGTLNLSFNQFSGQIPEMYG 183
G IP + +K L P L + L ++LS N+ +G+IP+ G
Sbjct: 450 MLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLN-WISLSNNRLTGEIPKWIG 508
Query: 184 HFPVMVSLDLRNNNLSGEIP 203
+ L L NN+ SG IP
Sbjct: 509 RLENLAILKLSNNSFSGNIP 528
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 42/99 (42%), Gaps = 25/99 (25%)
Query: 105 IPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHXXXXXXXXXXXXPEFLLDLRALT 164
IP+ L N TNL ++ L++N G IP I L+NL
Sbjct: 479 IPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLA------------------------ 514
Query: 165 GTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIP 203
L LS N FSG IP G ++ LDL N +G IP
Sbjct: 515 -ILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIP 552
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 4/105 (3%)
Query: 101 FSKPIPANLFNATN-LVYLDLAHNSFCGPIPDRIKTLKNLTHXXXXXXXXXXXXP-EFLL 158
F+ IP L A + L LDL+ N F G +P + L P + LL
Sbjct: 278 FTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLL 337
Query: 159 DLRALTGTLNLSFNQFSGQIPEMYGHFPV-MVSLDLRNNNLSGEI 202
+R L L+LSFN+FSG++PE + +++LDL +NN SG I
Sbjct: 338 KMRGLK-VLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPI 381
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 52/105 (49%), Gaps = 8/105 (7%)
Query: 101 FSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHXXXXXXXXXXXXPEFLLD- 159
FS+ I T L L+++ N F GPIP LK+L + P+FL
Sbjct: 236 FSRAIST----CTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGA 289
Query: 160 LRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQ 204
LTG L+LS N F G +P +G ++ SL L +NN SGE+P
Sbjct: 290 CDTLTG-LDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPM 333
Score = 33.1 bits (74), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 27/61 (44%)
Query: 70 LYLPNRNLTGYMPXXXXXXXXXXXXXXXXXXFSKPIPANLFNATNLVYLDLAHNSFCGPI 129
+ L N LTG +P FS IPA L + +L++LDL N F G I
Sbjct: 492 ISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTI 551
Query: 130 P 130
P
Sbjct: 552 P 552
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 98/192 (51%), Gaps = 24/192 (12%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEK--LLISDFIRNGS 431
VVAV++L +DFE E+E + +QH NIV+ K Y+ + LI +++ GS
Sbjct: 44 VVAVKKLQHSTEE-HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS 102
Query: 432 L--YAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDE 489
L Y HA D + L + +++ +G+ Y+ ++Y+H ++ + IL+++E
Sbjct: 103 LRDYLQAHAERIDHIKLLQYTSQI------CKGMEYL---GTKRYIHRDLATRNILVENE 153
Query: 490 LHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDV 549
I FGL ++LP + K V S I + APE+ + SKF+ DV
Sbjct: 154 NRVKIGDFGLTKVLPQDKEXXK----VKEPGESPI-----FWYAPES-LTESKFSVASDV 203
Query: 550 YSFGIVLLEILT 561
+SFG+VL E+ T
Sbjct: 204 WSFGVVLYELFT 215
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 122/273 (44%), Gaps = 49/273 (17%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
VA++ L G + +DF E + + HPNI+RL+ + +++++++ NGSL +
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 435 ALHAGPSDSLPPLPWEARLKIAQ------GTARGLMYIHEYSPRKYVHGNIKSTKILLDD 488
L +A+ + Q G A G+ Y+ S +VH ++ + IL++
Sbjct: 136 FLRKH----------DAQFTVIQLVGMLRGIASGMKYL---SDMGFVHRDLAARNILINS 182
Query: 489 ELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCD 548
L +S FGL+R+L E + +R I + +PEA Y KFT D
Sbjct: 183 NLVCKVSDFGLSRVL---------EDDPEAAYTTRGGKIPIRWTSPEAIAY-RKFTSASD 232
Query: 549 VYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVID-PALVKEIHAKR 606
V+S+GIVL E+++ G P N V KA E L +D PA
Sbjct: 233 VWSYGIVLWEVMSYGERPYWEMSNQD------VIKAVDEGYRLPPPMDCPA--------- 277
Query: 607 QVLATFHIALNCTELDPEFRPRMRTVSESLDRV 639
A + + L+C + D RP+ + LD++
Sbjct: 278 ---ALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 121/273 (44%), Gaps = 49/273 (17%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
VA++ L G + +DF E + + HPNI+RL+ + +++++ + NGSL +
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDS 135
Query: 435 ALHAGPSDSLPPLPWEARLKIAQ------GTARGLMYIHEYSPRKYVHGNIKSTKILLDD 488
L +A+ + Q G A G+ Y+ S YVH ++ + IL++
Sbjct: 136 FLRKH----------DAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINS 182
Query: 489 ELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCD 548
L +S FGL+R+L E + +R I + +PEA Y KFT D
Sbjct: 183 NLVCKVSDFGLSRVL---------EDDPEAAYTTRGGKIPIRWTSPEAIAY-RKFTSASD 232
Query: 549 VYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVID-PALVKEIHAKR 606
V+S+GIVL E+++ G P N V KA E L +D PA
Sbjct: 233 VWSYGIVLWEVMSYGERPYWEMSNQD------VIKAVDEGYRLPPPMDCPA--------- 277
Query: 607 QVLATFHIALNCTELDPEFRPRMRTVSESLDRV 639
A + + L+C + D RP+ + LD++
Sbjct: 278 ---ALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 139/308 (45%), Gaps = 46/308 (14%)
Query: 333 EGFSLELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDF 392
+G + + ++ R S + K G +V +G +G T VA++ L G T + F
Sbjct: 6 QGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGT---TRVAIKTLKPG--TMSPEAF 60
Query: 393 ESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHA--GPSDSLPPLPWE 450
E + + +++H +V+L A + + ++++++ GSL L G LP L
Sbjct: 61 LQEAQVMKKIRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQL--- 116
Query: 451 ARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVT 510
+ +A A G+ Y+ + YVH ++++ IL+ + L ++ FGL RL +
Sbjct: 117 --VDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARL------IE 165
Query: 511 KNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGP 569
NE G I + APEA +YG +FT K DV+SFGI+L E+ T GR+P G
Sbjct: 166 DNEYTARQGAKFPIK-----WTAPEAALYG-RFTIKSDVWSFGILLTELTTKGRVPYPGM 219
Query: 570 ENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRM 629
N + + V + +R P P + +H + C DPE RP
Sbjct: 220 VN--REVLDQVERGYRMPCP------PECPESLH---------DLMCQCWRKDPEERPTF 262
Query: 630 RTVSESLD 637
+ L+
Sbjct: 263 EYLQAFLE 270
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 140/308 (45%), Gaps = 46/308 (14%)
Query: 333 EGFSLELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDF 392
+G + + ++ R S + K G +V +G +G T VA++ L G+ + + F
Sbjct: 173 QGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGT---TRVAIKTLKPGNMS--PEAF 227
Query: 393 ESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHA--GPSDSLPPLPWE 450
E + + +++H +V+L A + + ++++++ GSL L G LP L
Sbjct: 228 LQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQL--- 283
Query: 451 ARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVT 510
+ +A A G+ Y+ + YVH ++++ IL+ + L ++ FGL RL +
Sbjct: 284 --VDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLGRL------IE 332
Query: 511 KNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGP 569
NE G I + APEA +YG +FT K DV+SFGI+L E+ T GR+P G
Sbjct: 333 DNEYTARQGAKFPIK-----WTAPEAALYG-RFTIKSDVWSFGILLTELTTKGRVPYPGM 386
Query: 570 ENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRM 629
N + + V + +R P P + +H + C DPE RP
Sbjct: 387 VN--REVLDQVERGYRMPCP------PECPESLH---------DLMCQCWRKDPEERPTF 429
Query: 630 RTVSESLD 637
+ L+
Sbjct: 430 EYLQAFLE 437
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 69/131 (52%), Gaps = 3/131 (2%)
Query: 111 NATNLVYLDLAHNSFCGPIPDRIKTLKNLTHXXXXXXXXXXXXPEFLLDLRALTGTLNLS 170
N ++++LD+++N G IP I ++ L P+ + DLR L L+LS
Sbjct: 630 NNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLN-ILDLS 688
Query: 171 FNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGLCGFPLQSP 230
N+ G+IP+ ++ +DL NNNLSG IP++G P F NPGLCG+PL P
Sbjct: 689 SNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPL--P 746
Query: 231 CPEPENPKVHA 241
+P N +A
Sbjct: 747 RCDPSNADGYA 757
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 60/125 (48%), Gaps = 7/125 (5%)
Query: 101 FSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHXXXXXXXXXXXXPEFLLDL 160
F+ IP L N + LV L L+ N G IP + +L L P+ L+ +
Sbjct: 406 FTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYV 465
Query: 161 RALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQ-VG-----SLLNQGPT 214
+ L TL L FN +G+IP + + + L NN L+GEIP+ +G ++L
Sbjct: 466 KTLE-TLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNN 524
Query: 215 AFSGN 219
+FSGN
Sbjct: 525 SFSGN 529
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Query: 101 FSKPIPANLFN-ATNLVYLDLAHNSFCGPI-PDRIKTLKN-LTHXXXXXXXXXXXXPEFL 157
FS +P +L N + +L+ LDL+ N+F GPI P+ + KN L P L
Sbjct: 355 FSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTL 414
Query: 158 LDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQ 204
+ L +L+LSFN SG IP G + L L N L GEIPQ
Sbjct: 415 SNCSELV-SLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQ 460
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 57/140 (40%), Gaps = 1/140 (0%)
Query: 64 RNRVTSLYLPNRNLTGYMPXXXXXXXXXXXXXXXXXXFSKPIPANLFNATNLVYLDLAHN 123
+N + LYL N TG +P S IP++L + + L L L N
Sbjct: 393 KNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLN 452
Query: 124 SFCGPIPDRIKTLKNLTHXXXXXXXXXXXXPEFLLDLRALTGTLNLSFNQFSGQIPEMYG 183
G IP + +K L P L + L ++LS N+ +G+IP+ G
Sbjct: 453 MLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLN-WISLSNNRLTGEIPKWIG 511
Query: 184 HFPVMVSLDLRNNNLSGEIP 203
+ L L NN+ SG IP
Sbjct: 512 RLENLAILKLSNNSFSGNIP 531
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 42/99 (42%), Gaps = 25/99 (25%)
Query: 105 IPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHXXXXXXXXXXXXPEFLLDLRALT 164
IP+ L N TNL ++ L++N G IP I L+NL
Sbjct: 482 IPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENL------------------------- 516
Query: 165 GTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIP 203
L LS N FSG IP G ++ LDL N +G IP
Sbjct: 517 AILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIP 555
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 4/105 (3%)
Query: 101 FSKPIPANLFNATN-LVYLDLAHNSFCGPIPDRIKTLKNLTHXXXXXXXXXXXXP-EFLL 158
F+ IP L A + L LDL+ N F G +P + L P + LL
Sbjct: 281 FTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLL 340
Query: 159 DLRALTGTLNLSFNQFSGQIPEMYGHFPV-MVSLDLRNNNLSGEI 202
+R L L+LSFN+FSG++PE + +++LDL +NN SG I
Sbjct: 341 KMRGLK-VLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPI 384
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 52/105 (49%), Gaps = 8/105 (7%)
Query: 101 FSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHXXXXXXXXXXXXPEFLLD- 159
FS+ I T L L+++ N F GPIP LK+L + P+FL
Sbjct: 239 FSRAIST----CTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGA 292
Query: 160 LRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQ 204
LTG L+LS N F G +P +G ++ SL L +NN SGE+P
Sbjct: 293 CDTLTG-LDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPM 336
Score = 32.7 bits (73), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 27/61 (44%)
Query: 70 LYLPNRNLTGYMPXXXXXXXXXXXXXXXXXXFSKPIPANLFNATNLVYLDLAHNSFCGPI 129
+ L N LTG +P FS IPA L + +L++LDL N F G I
Sbjct: 495 ISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTI 554
Query: 130 P 130
P
Sbjct: 555 P 555
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 97/192 (50%), Gaps = 24/192 (12%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEK--LLISDFIRNGS 431
VVAV++L +DFE E+E + +QH NIV+ K Y+ + LI +++ GS
Sbjct: 42 VVAVKKLQHSTEE-HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS 100
Query: 432 L--YAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDE 489
L Y H D + L + +++ +G+ Y+ ++Y+H N+ + IL+++E
Sbjct: 101 LRDYLQKHKERIDHIKLLQYTSQI------CKGMEYL---GTKRYIHRNLATRNILVENE 151
Query: 490 LHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDV 549
I FGL ++LP + K V S I + APE+ + SKF+ DV
Sbjct: 152 NRVKIGDFGLTKVLPQDKEYYK----VKEPGESPI-----FWYAPES-LTESKFSVASDV 201
Query: 550 YSFGIVLLEILT 561
+SFG+VL E+ T
Sbjct: 202 WSFGVVLYELFT 213
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 97/192 (50%), Gaps = 24/192 (12%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEK--LLISDFIRNGS 431
VVAV++L +DFE E+E + +QH NIV+ K Y+ + LI +F+ GS
Sbjct: 44 VVAVKKLQHSTEE-HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGS 102
Query: 432 L--YAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDE 489
L Y H D + L + +++ +G+ Y+ ++Y+H ++ + IL+++E
Sbjct: 103 LREYLQKHKERIDHIKLLQYTSQI------CKGMEYL---GTKRYIHRDLATRNILVENE 153
Query: 490 LHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDV 549
I FGL ++LP + K V S I + APE+ + SKF+ DV
Sbjct: 154 NRVKIGDFGLTKVLPQDKEXXK----VKEPGESPI-----FWYAPES-LTESKFSVASDV 203
Query: 550 YSFGIVLLEILT 561
+SFG+VL E+ T
Sbjct: 204 WSFGVVLYELFT 215
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 118/272 (43%), Gaps = 47/272 (17%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
VA++ L G + +DF SE + + HPNI+ L+ ++I++++ NGSL A
Sbjct: 45 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 104
Query: 435 ALHAGPSDSLPPLPWEARLKIAQ------GTARGLMYIHEYSPRKYVHGNIKSTKILLDD 488
L + R + Q G G+ Y+ + S YVH ++ + IL++
Sbjct: 105 FLRKN----------DGRFTVIQLVGMLRGIGSGMKYLSDMS---YVHRDLAARNILVNS 151
Query: 489 ELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCD 548
L +S FG++R+L E + +R I + APEA Y KFT D
Sbjct: 152 NLVCKVSDFGMSRVL---------EDDPEAAYTTRGGKIPIRWTAPEAIAY-RKFTSASD 201
Query: 549 VYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQ 607
V+S+GIV+ E+++ G P N V KA E L +D
Sbjct: 202 VWSYGIVMWEVMSYGERPYWDMSNQD------VIKAIEEGYRLPPPMDCP---------- 245
Query: 608 VLATFHIALNCTELDPEFRPRMRTVSESLDRV 639
+A + L+C + + RP+ + LD++
Sbjct: 246 -IALHQLMLDCWQKERSDRPKFGQIVNMLDKL 276
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 139/308 (45%), Gaps = 46/308 (14%)
Query: 333 EGFSLELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDF 392
+G + + ++ R S + K G +V +G +G T VA++ L G T + F
Sbjct: 6 QGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGT---TRVAIKTLKPG--TMSPEAF 60
Query: 393 ESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHA--GPSDSLPPLPWE 450
E + + +++H +V+L A + + ++++++ GSL L G LP L
Sbjct: 61 LQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQL--- 116
Query: 451 ARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVT 510
+ +A A G+ Y+ + YVH ++++ IL+ + L ++ FGL RL +
Sbjct: 117 --VDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARL------IE 165
Query: 511 KNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGP 569
NE G I + APEA +YG +FT K DV+SFGI+L E+ T GR+P G
Sbjct: 166 DNEYTARQGAKFPIK-----WTAPEAALYG-RFTIKSDVWSFGILLTELTTKGRVPYPGM 219
Query: 570 ENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRM 629
N + + V + +R P P + +H + C DPE RP
Sbjct: 220 VN--REVLDQVERGYRMPCP------PECPESLH---------DLMCQCWRKDPEERPTF 262
Query: 630 RTVSESLD 637
+ L+
Sbjct: 263 EYLQAFLE 270
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 118/272 (43%), Gaps = 47/272 (17%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
VA++ L G + +DF SE + + HPNI+ L+ ++I++++ NGSL A
Sbjct: 39 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 98
Query: 435 ALHAGPSDSLPPLPWEARLKIAQ------GTARGLMYIHEYSPRKYVHGNIKSTKILLDD 488
L + R + Q G G+ Y+ + S YVH ++ + IL++
Sbjct: 99 FLRKN----------DGRFTVIQLVGMLRGIGSGMKYLSDMS---YVHRDLAARNILVNS 145
Query: 489 ELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCD 548
L +S FG++R+L E + +R I + APEA Y KFT D
Sbjct: 146 NLVCKVSDFGMSRVL---------EDDPEAAYTTRGGKIPIRWTAPEAIAY-RKFTSASD 195
Query: 549 VYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQ 607
V+S+GIV+ E+++ G P N V KA E L +D
Sbjct: 196 VWSYGIVMWEVMSYGERPYWDMSNQD------VIKAIEEGYRLPPPMDCP---------- 239
Query: 608 VLATFHIALNCTELDPEFRPRMRTVSESLDRV 639
+A + L+C + + RP+ + LD++
Sbjct: 240 -IALHQLMLDCWQKERSDRPKFGQIVNMLDKL 270
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 121/273 (44%), Gaps = 49/273 (17%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
VA++ L G + +DF E + + HPNI+RL+ + +++++ + NGSL +
Sbjct: 47 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDS 106
Query: 435 ALHAGPSDSLPPLPWEARLKIAQ------GTARGLMYIHEYSPRKYVHGNIKSTKILLDD 488
L +A+ + Q G A G+ Y+ S YVH ++ + IL++
Sbjct: 107 FLRKH----------DAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINS 153
Query: 489 ELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCD 548
L +S FGL+R+L E + +R I + +PEA Y KFT D
Sbjct: 154 NLVCKVSDFGLSRVL---------EDDPEAAYTTRGGKIPIRWTSPEAIAY-RKFTSASD 203
Query: 549 VYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVID-PALVKEIHAKR 606
V+S+GIVL E+++ G P N V KA E L +D PA
Sbjct: 204 VWSYGIVLWEVMSYGERPYWEMSNQD------VIKAVDEGYRLPPPMDCPA--------- 248
Query: 607 QVLATFHIALNCTELDPEFRPRMRTVSESLDRV 639
A + + L+C + D RP+ + LD++
Sbjct: 249 ---ALYQLMLDCWQKDRNNRPKFEQIVSILDKL 278
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 138/308 (44%), Gaps = 46/308 (14%)
Query: 333 EGFSLELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDF 392
+G + + ++ R S + K G +V +G +G T VA++ L G T + F
Sbjct: 6 QGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGT---TRVAIKTLKPG--TMSPEAF 60
Query: 393 ESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHA--GPSDSLPPLPWE 450
E + + +++H +V+L A + + ++ +++ GSL L G LP L
Sbjct: 61 LQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQL--- 116
Query: 451 ARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVT 510
+ +A A G+ Y+ + YVH ++++ IL+ + L ++ FGL RL +
Sbjct: 117 --VDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARL------IE 165
Query: 511 KNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGP 569
NE G I + APEA +YG +FT K DV+SFGI+L E+ T GR+P G
Sbjct: 166 DNEYTARQGAKFPIK-----WTAPEAALYG-RFTIKSDVWSFGILLTELTTKGRVPYPGM 219
Query: 570 ENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRM 629
N + + V + +R P P + +H + C DPE RP
Sbjct: 220 VN--REVLDQVERGYRMPCP------PECPESLH---------DLMCQCWRKDPEERPTF 262
Query: 630 RTVSESLD 637
+ L+
Sbjct: 263 EYLQAFLE 270
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 109/228 (47%), Gaps = 20/228 (8%)
Query: 335 FSLELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFES 394
F+ E+ V+G + G +YK ++ SG VA++ L G + DF
Sbjct: 37 FTTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSG-KKEVPVAIKTLKAGYTEKQRVDFLG 95
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSD-SLPPLPWEARL 453
E + + H NI+RL+ ++I++++ NG+L L + S+ L +
Sbjct: 96 EAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQL-----V 150
Query: 454 KIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNE 513
+ +G A G+ Y+ + YVH ++ + IL++ L +S FGL+R+L +
Sbjct: 151 GMLRGIAAGMKYLANMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA---- 203
Query: 514 TIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT 561
T TSG I + APEA Y KFT DV+SFGIV+ E++T
Sbjct: 204 TYTTSG-----GKIPIRWTAPEAISY-RKFTSASDVWSFGIVMWEVMT 245
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 138/308 (44%), Gaps = 46/308 (14%)
Query: 333 EGFSLELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDF 392
+G + + ++ R S + K G +V +G +G T VA++ L G T + F
Sbjct: 6 QGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGT---TRVAIKTLKPG--TMSPEAF 60
Query: 393 ESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHA--GPSDSLPPLPWE 450
E + + +++H +V+L A + + ++++++ GSL L G LP L
Sbjct: 61 LQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQL--- 116
Query: 451 ARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVT 510
+ +A A G+ Y+ + YVH ++ + IL+ + L ++ FGL RL +
Sbjct: 117 --VDMAAQIASGMAYVERMN---YVHRDLAAANILVGENLVCKVADFGLARL------IE 165
Query: 511 KNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGP 569
NE G I + APEA +YG +FT K DV+SFGI+L E+ T GR+P G
Sbjct: 166 DNEYTARQGAKFPIK-----WTAPEAALYG-RFTIKSDVWSFGILLTELTTKGRVPYPGM 219
Query: 570 ENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRM 629
N + + V + +R P P + +H + C DPE RP
Sbjct: 220 VN--REVLDQVERGYRMPCP------PECPESLH---------DLMCQCWRKDPEERPTF 262
Query: 630 RTVSESLD 637
+ L+
Sbjct: 263 EYLQAFLE 270
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 97/192 (50%), Gaps = 24/192 (12%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEK--LLISDFIRNGS 431
VVAV++L +DFE E+E + +QH NIV+ K Y+ + LI +++ GS
Sbjct: 46 VVAVKKLQHSTEE-HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS 104
Query: 432 L--YAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDE 489
L Y H D + L + +++ +G+ Y+ ++Y+H ++ + IL+++E
Sbjct: 105 LRDYLQKHKERIDHIKLLQYTSQI------CKGMEYL---GTKRYIHRDLATRNILVENE 155
Query: 490 LHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDV 549
I FGL ++LP + K V S I + APE+ + SKF+ DV
Sbjct: 156 NRVKIGDFGLTKVLPQDKEXXK----VKEPGESPI-----FWYAPES-LTESKFSVASDV 205
Query: 550 YSFGIVLLEILT 561
+SFG+VL E+ T
Sbjct: 206 WSFGVVLYELFT 217
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 97/192 (50%), Gaps = 24/192 (12%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEK--LLISDFIRNGS 431
VVAV++L +DFE E+E + +QH NIV+ K Y+ + LI +++ GS
Sbjct: 59 VVAVKKLQHSTEE-HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS 117
Query: 432 L--YAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDE 489
L Y H D + L + +++ +G+ Y+ ++Y+H ++ + IL+++E
Sbjct: 118 LRDYLQKHKERIDHIKLLQYTSQI------CKGMEYL---GTKRYIHRDLATRNILVENE 168
Query: 490 LHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDV 549
I FGL ++LP + K V S I + APE+ + SKF+ DV
Sbjct: 169 NRVKIGDFGLTKVLPQDKEXXK----VKEPGESPI-----FWYAPES-LTESKFSVASDV 218
Query: 550 YSFGIVLLEILT 561
+SFG+VL E+ T
Sbjct: 219 WSFGVVLYELFT 230
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 97/192 (50%), Gaps = 24/192 (12%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEK--LLISDFIRNGS 431
VVAV++L +DFE E+E + +QH NIV+ K Y+ + LI +++ GS
Sbjct: 44 VVAVKKLQHSTEE-HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS 102
Query: 432 L--YAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDE 489
L Y H D + L + +++ +G+ Y+ ++Y+H ++ + IL+++E
Sbjct: 103 LRDYLQKHKERIDHIKLLQYTSQI------CKGMEYL---GTKRYIHRDLATRNILVENE 153
Query: 490 LHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDV 549
I FGL ++LP + K V S I + APE+ + SKF+ DV
Sbjct: 154 NRVKIGDFGLTKVLPQDKEXXK----VKEPGESPI-----FWYAPES-LTESKFSVASDV 203
Query: 550 YSFGIVLLEILT 561
+SFG+VL E+ T
Sbjct: 204 WSFGVVLYELFT 215
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 97/192 (50%), Gaps = 24/192 (12%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEK--LLISDFIRNGS 431
VVAV++L +DFE E+E + +QH NIV+ K Y+ + LI +++ GS
Sbjct: 47 VVAVKKLQHSTEE-HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS 105
Query: 432 L--YAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDE 489
L Y H D + L + +++ +G+ Y+ ++Y+H ++ + IL+++E
Sbjct: 106 LRDYLQKHKERIDHIKLLQYTSQI------CKGMEYL---GTKRYIHRDLATRNILVENE 156
Query: 490 LHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDV 549
I FGL ++LP + K V S I + APE+ + SKF+ DV
Sbjct: 157 NRVKIGDFGLTKVLPQDKEXXK----VKEPGESPI-----FWYAPES-LTESKFSVASDV 206
Query: 550 YSFGIVLLEILT 561
+SFG+VL E+ T
Sbjct: 207 WSFGVVLYELFT 218
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 97/192 (50%), Gaps = 24/192 (12%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEK--LLISDFIRNGS 431
VVAV++L +DFE E+E + +QH NIV+ K Y+ + LI +++ GS
Sbjct: 39 VVAVKKLQHSTEE-HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS 97
Query: 432 L--YAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDE 489
L Y H D + L + +++ +G+ Y+ ++Y+H ++ + IL+++E
Sbjct: 98 LRDYLQKHKERIDHIKLLQYTSQI------CKGMEYL---GTKRYIHRDLATRNILVENE 148
Query: 490 LHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDV 549
I FGL ++LP + K V S I + APE+ + SKF+ DV
Sbjct: 149 NRVKIGDFGLTKVLPQDKEXXK----VKEPGESPI-----FWYAPES-LTESKFSVASDV 198
Query: 550 YSFGIVLLEILT 561
+SFG+VL E+ T
Sbjct: 199 WSFGVVLYELFT 210
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 97/192 (50%), Gaps = 24/192 (12%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEK--LLISDFIRNGS 431
VVAV++L +DFE E+E + +QH NIV+ K Y+ + LI +++ GS
Sbjct: 72 VVAVKKLQHSTEE-HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS 130
Query: 432 L--YAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDE 489
L Y H D + L + +++ +G+ Y+ ++Y+H ++ + IL+++E
Sbjct: 131 LRDYLQKHKERIDHIKLLQYTSQI------CKGMEYL---GTKRYIHRDLATRNILVENE 181
Query: 490 LHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDV 549
I FGL ++LP + K V S I + APE+ + SKF+ DV
Sbjct: 182 NRVKIGDFGLTKVLPQDKEXXK----VKEPGESPI-----FWYAPES-LTESKFSVASDV 231
Query: 550 YSFGIVLLEILT 561
+SFG+VL E+ T
Sbjct: 232 WSFGVVLYELFT 243
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 139/308 (45%), Gaps = 46/308 (14%)
Query: 333 EGFSLELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDF 392
+G + + ++ R S + K G +V +G +G T VA++ L G T + F
Sbjct: 255 QGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGT---TRVAIKTLKPG--TMSPEAF 309
Query: 393 ESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAAL--HAGPSDSLPPLPWE 450
E + + +++H +V+L A + + ++++++ GSL L G LP L
Sbjct: 310 LQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQL--- 365
Query: 451 ARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVT 510
+ +A A G+ Y+ + YVH ++++ IL+ + L ++ FGL RL +
Sbjct: 366 --VDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARL------IE 414
Query: 511 KNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGP 569
NE G I + APEA +YG +FT K DV+SFGI+L E+ T GR+P G
Sbjct: 415 DNEYTARQGAKFPIK-----WTAPEAALYG-RFTIKSDVWSFGILLTELTTKGRVPYPGM 468
Query: 570 ENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRM 629
N + + V + +R P P + +H + C +PE RP
Sbjct: 469 VN--REVLDQVERGYRMPCP------PECPESLH---------DLMCQCWRKEPEERPTF 511
Query: 630 RTVSESLD 637
+ L+
Sbjct: 512 EYLQAFLE 519
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 97/192 (50%), Gaps = 24/192 (12%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEK--LLISDFIRNGS 431
VVAV++L +DFE E+E + +QH NIV+ K Y+ + LI +++ GS
Sbjct: 41 VVAVKKLQHSTEE-HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS 99
Query: 432 L--YAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDE 489
L Y H D + L + +++ +G+ Y+ ++Y+H ++ + IL+++E
Sbjct: 100 LRDYLQKHKERIDHIKLLQYTSQI------CKGMEYL---GTKRYIHRDLATRNILVENE 150
Query: 490 LHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDV 549
I FGL ++LP + K V S I + APE+ + SKF+ DV
Sbjct: 151 NRVKIGDFGLTKVLPQDKEXXK----VKEPGESPI-----FWYAPES-LTESKFSVASDV 200
Query: 550 YSFGIVLLEILT 561
+SFG+VL E+ T
Sbjct: 201 WSFGVVLYELFT 212
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 97/192 (50%), Gaps = 24/192 (12%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEK--LLISDFIRNGS 431
VVAV++L +DFE E+E + +QH NIV+ K Y+ + LI +++ GS
Sbjct: 59 VVAVKKLQHSTEE-HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS 117
Query: 432 L--YAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDE 489
L Y H D + L + +++ +G+ Y+ ++Y+H ++ + IL+++E
Sbjct: 118 LRDYLQKHKERIDHIKLLQYTSQI------CKGMEYL---GTKRYIHRDLATRNILVENE 168
Query: 490 LHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDV 549
I FGL ++LP + K V S I + APE+ + SKF+ DV
Sbjct: 169 NRVKIGDFGLTKVLPQDKEXXK----VKEPGESPI-----FWYAPES-LTESKFSVASDV 218
Query: 550 YSFGIVLLEILT 561
+SFG+VL E+ T
Sbjct: 219 WSFGVVLYELFT 230
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 97/192 (50%), Gaps = 24/192 (12%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEK--LLISDFIRNGS 431
VVAV++L +DFE E+E + +QH NIV+ K Y+ + LI +++ GS
Sbjct: 48 VVAVKKLQHSTEE-HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS 106
Query: 432 L--YAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDE 489
L Y H D + L + +++ +G+ Y+ ++Y+H ++ + IL+++E
Sbjct: 107 LRDYLQKHKERIDHIKLLQYTSQI------CKGMEYL---GTKRYIHRDLATRNILVENE 157
Query: 490 LHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDV 549
I FGL ++LP + K V S I + APE+ + SKF+ DV
Sbjct: 158 NRVKIGDFGLTKVLPQDKEXXK----VKEPGESPI-----FWYAPES-LTESKFSVASDV 207
Query: 550 YSFGIVLLEILT 561
+SFG+VL E+ T
Sbjct: 208 WSFGVVLYELFT 219
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 97/192 (50%), Gaps = 24/192 (12%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEK--LLISDFIRNGS 431
VVAV++L +DFE E+E + +QH NIV+ K Y+ + LI +++ GS
Sbjct: 40 VVAVKKLQHSTEE-HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS 98
Query: 432 L--YAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDE 489
L Y H D + L + +++ +G+ Y+ ++Y+H ++ + IL+++E
Sbjct: 99 LRDYLQKHKERIDHIKLLQYTSQI------CKGMEYL---GTKRYIHRDLATRNILVENE 149
Query: 490 LHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDV 549
I FGL ++LP + K V S I + APE+ + SKF+ DV
Sbjct: 150 NRVKIGDFGLTKVLPQDKEXXK----VKEPGESPI-----FWYAPES-LTESKFSVASDV 199
Query: 550 YSFGIVLLEILT 561
+SFG+VL E+ T
Sbjct: 200 WSFGVVLYELFT 211
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 97/192 (50%), Gaps = 24/192 (12%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEK--LLISDFIRNGS 431
VVAV++L +DFE E+E + +QH NIV+ K Y+ + LI +++ GS
Sbjct: 41 VVAVKKLQHSTEE-HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS 99
Query: 432 L--YAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDE 489
L Y H D + L + +++ +G+ Y+ ++Y+H ++ + IL+++E
Sbjct: 100 LRDYLQKHKERIDHIKLLQYTSQI------CKGMEYL---GTKRYIHRDLATRNILVENE 150
Query: 490 LHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDV 549
I FGL ++LP + K V S I + APE+ + SKF+ DV
Sbjct: 151 NRVKIGDFGLTKVLPQDKEXXK----VKEPGESPI-----FWYAPES-LTESKFSVASDV 200
Query: 550 YSFGIVLLEILT 561
+SFG+VL E+ T
Sbjct: 201 WSFGVVLYELFT 212
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 138/308 (44%), Gaps = 46/308 (14%)
Query: 333 EGFSLELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDF 392
+G + + ++ R S + K G +V +G +G T VA++ L G T + F
Sbjct: 6 QGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGT---TRVAIKTLKPG--TMSPEAF 60
Query: 393 ESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHA--GPSDSLPPLPWE 450
E + + +++H +V+L A + + ++ +++ GSL L G LP L
Sbjct: 61 LQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQL--- 116
Query: 451 ARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVT 510
+ +A A G+ Y+ + YVH ++++ IL+ + L ++ FGL RL +
Sbjct: 117 --VDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARL------IE 165
Query: 511 KNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGP 569
NE G I + APEA +YG +FT K DV+SFGI+L E+ T GR+P G
Sbjct: 166 DNEXTARQGAKFPIK-----WTAPEAALYG-RFTIKSDVWSFGILLTELTTKGRVPYPGM 219
Query: 570 ENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRM 629
N + + V + +R P P + +H + C DPE RP
Sbjct: 220 VN--REVLDQVERGYRMPCP------PECPESLH---------DLMCQCWRKDPEERPTF 262
Query: 630 RTVSESLD 637
+ L+
Sbjct: 263 EYLQAFLE 270
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 97/192 (50%), Gaps = 24/192 (12%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEK--LLISDFIRNGS 431
VVAV++L +DFE E+E + +QH NIV+ K Y+ + LI +++ GS
Sbjct: 45 VVAVKKLQHSTEE-HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS 103
Query: 432 L--YAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDE 489
L Y H D + L + +++ +G+ Y+ ++Y+H ++ + IL+++E
Sbjct: 104 LRDYLQKHKERIDHIKLLQYTSQI------CKGMEYL---GTKRYIHRDLATRNILVENE 154
Query: 490 LHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDV 549
I FGL ++LP + K V S I + APE+ + SKF+ DV
Sbjct: 155 NRVKIGDFGLTKVLPQDKEXXK----VKEPGESPI-----FWYAPES-LTESKFSVASDV 204
Query: 550 YSFGIVLLEILT 561
+SFG+VL E+ T
Sbjct: 205 WSFGVVLYELFT 216
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 133/297 (44%), Gaps = 46/297 (15%)
Query: 344 RASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ 403
R S + K G +V +G +G T VA++ L G T + F E + + +++
Sbjct: 8 RESLRLEVKLGQGCFGEVWMGTWNGT---TRVAIKTLKPG--TMSPEAFLQEAQVMKKLR 62
Query: 404 HPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHA--GPSDSLPPLPWEARLKIAQGTAR 461
H +V+L A + + ++++++ GSL L G LP L + +A A
Sbjct: 63 HEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQL-----VDMAAQIAS 116
Query: 462 GLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTG 521
G+ Y+ + YVH ++++ IL+ + L ++ FGL RL + NE G
Sbjct: 117 GMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARL------IEDNEYTARQGAK 167
Query: 522 SRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLV 580
I + APEA +YG +FT K DV+SFGI+L E+ T GR+P G N + + V
Sbjct: 168 FPIK-----WTAPEAALYG-RFTIKSDVWSFGILLTELTTKGRVPYPGMVN--REVLDQV 219
Query: 581 RKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 637
+ +R P P + +H + C DPE RP + L+
Sbjct: 220 ERGYRMPCP------PECPESLH---------DLMCQCWRKDPEERPTFEYLQAFLE 261
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 97/192 (50%), Gaps = 24/192 (12%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEK--LLISDFIRNGS 431
VVAV++L +DFE E+E + +QH NIV+ K Y+ + LI +++ GS
Sbjct: 41 VVAVKKLQHSTEE-HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGS 99
Query: 432 L--YAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDE 489
L Y H D + L + +++ +G+ Y+ ++Y+H ++ + IL+++E
Sbjct: 100 LRDYLQKHKERIDHIKLLQYTSQI------CKGMEYL---GTKRYIHRDLATRNILVENE 150
Query: 490 LHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDV 549
I FGL ++LP + K V S I + APE+ + SKF+ DV
Sbjct: 151 NRVKIGDFGLTKVLPQDKEFFK----VKEPGESPI-----FWYAPES-LTESKFSVASDV 200
Query: 550 YSFGIVLLEILT 561
+SFG+VL E+ T
Sbjct: 201 WSFGVVLYELFT 212
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 138/308 (44%), Gaps = 46/308 (14%)
Query: 333 EGFSLELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDF 392
+G + + ++ R S + K G +V +G +G T VA++ L G T + F
Sbjct: 6 QGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGT---TRVAIKTLKPG--TMSPEAF 60
Query: 393 ESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHA--GPSDSLPPLPWE 450
E + + +++H +V+L A + + ++ +++ GSL L G LP L
Sbjct: 61 LQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQL--- 116
Query: 451 ARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVT 510
+ +A A G+ Y+ + YVH ++++ IL+ + L ++ FGL RL +
Sbjct: 117 --VDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARL------IE 165
Query: 511 KNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGP 569
NE G I + APEA +YG +FT K DV+SFGI+L E+ T GR+P G
Sbjct: 166 DNEYTARQGAKFPIK-----WTAPEAALYG-RFTIKSDVWSFGILLTELTTKGRVPYPGM 219
Query: 570 ENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRM 629
N + + V + +R P P + +H + C DPE RP
Sbjct: 220 VN--REVLDQVERGYRMPCP------PECPESLH---------DLMCQCWRKDPEERPTF 262
Query: 630 RTVSESLD 637
+ L+
Sbjct: 263 EYLQAFLE 270
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 138/308 (44%), Gaps = 46/308 (14%)
Query: 333 EGFSLELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDF 392
+G + + ++ R S + K G +V +G +G T VA++ L G T + F
Sbjct: 6 QGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGT---TRVAIKTLKPG--TMSPEAF 60
Query: 393 ESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHA--GPSDSLPPLPWE 450
E + + +++H +V+L A + + ++++++ G L L G LP L
Sbjct: 61 LQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQL--- 116
Query: 451 ARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVT 510
+ +A A G+ Y+ + YVH ++++ IL+ + L ++ FGL RL +
Sbjct: 117 --VDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARL------IE 165
Query: 511 KNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGP 569
NE G I + APEA +YG +FT K DV+SFGI+L E+ T GR+P G
Sbjct: 166 DNEYTARQGAKFPIK-----WTAPEAALYG-RFTIKSDVWSFGILLTELTTKGRVPYPGM 219
Query: 570 ENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRM 629
N + + V + +R P P + +H + C DPE RP
Sbjct: 220 VN--REVLDQVERGYRMPCP------PECPESLH---------DLMCQCWRKDPEERPTF 262
Query: 630 RTVSESLD 637
+ L+
Sbjct: 263 EYLQAFLE 270
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 139/308 (45%), Gaps = 46/308 (14%)
Query: 333 EGFSLELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDF 392
+G + + ++ R S + K G +V +G +G T VA++ L G T + F
Sbjct: 172 QGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGT---TRVAIKTLKPG--TMSPEAF 226
Query: 393 ESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAAL--HAGPSDSLPPLPWE 450
E + + +++H +V+L A + + ++++++ GSL L G LP L
Sbjct: 227 LQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQL--- 282
Query: 451 ARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVT 510
+ +A A G+ Y+ + YVH ++++ IL+ + L ++ FGL RL +
Sbjct: 283 --VDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARL------IE 331
Query: 511 KNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGP 569
NE G I + APEA +YG +FT K DV+SFGI+L E+ T GR+P G
Sbjct: 332 DNEYTARQGAKFPIK-----WTAPEAALYG-RFTIKSDVWSFGILLTELTTKGRVPYPGM 385
Query: 570 ENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRM 629
N + + V + +R P P + +H + C +PE RP
Sbjct: 386 VN--REVLDQVERGYRMPCP------PECPESLH---------DLMCQCWRKEPEERPTF 428
Query: 630 RTVSESLD 637
+ L+
Sbjct: 429 EYLQAFLE 436
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 133/297 (44%), Gaps = 46/297 (15%)
Query: 344 RASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ 403
R S + K G +V +G +G T VA++ L G T + F E + + +++
Sbjct: 6 RESLRLEVKLGQGCFGEVWMGTWNGT---TRVAIKTLKPG--TMSPEAFLQEAQVMKKLR 60
Query: 404 HPNIVRLKAFYYANDEKLLISDFIRNGSLYAAL--HAGPSDSLPPLPWEARLKIAQGTAR 461
H +V+L A + + ++++++ GSL L G LP L + +A A
Sbjct: 61 HEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQL-----VDMAAQIAS 114
Query: 462 GLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTG 521
G+ Y+ + YVH ++++ IL+ + L ++ FGL RL + NE G
Sbjct: 115 GMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARL------IEDNEYTARQGAK 165
Query: 522 SRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLV 580
I + APEA +YG +FT K DV+SFGI+L E+ T GR+P G N + + V
Sbjct: 166 FPIK-----WTAPEAALYG-RFTIKSDVWSFGILLTELTTKGRVPYPGMVN--REVLDQV 217
Query: 581 RKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 637
+ +R P P + +H + C DPE RP + L+
Sbjct: 218 ERGYRMPCP------PECPESLH---------DLMCQCWRKDPEERPTFEYLQAFLE 259
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 139/308 (45%), Gaps = 46/308 (14%)
Query: 333 EGFSLELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDF 392
+G + + ++ R S + K G +V +G +G T VA++ L G T + F
Sbjct: 172 QGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGT---TRVAIKTLKPG--TMSPEAF 226
Query: 393 ESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAAL--HAGPSDSLPPLPWE 450
E + + +++H +V+L A + + ++++++ GSL L G LP L
Sbjct: 227 LQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQL--- 282
Query: 451 ARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVT 510
+ +A A G+ Y+ + YVH ++++ IL+ + L ++ FGL RL +
Sbjct: 283 --VDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARL------IE 331
Query: 511 KNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGP 569
NE G I + APEA +YG +FT K DV+SFGI+L E+ T GR+P G
Sbjct: 332 DNEYTARQGAKFPIK-----WTAPEAALYG-RFTIKSDVWSFGILLTELTTKGRVPYPGM 385
Query: 570 ENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRM 629
N + + V + +R P P + +H + C +PE RP
Sbjct: 386 VN--REVLDQVERGYRMPCP------PECPESLH---------DLMCQCWRKEPEERPTF 428
Query: 630 RTVSESLD 637
+ L+
Sbjct: 429 EYLQAFLE 436
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 139/308 (45%), Gaps = 46/308 (14%)
Query: 333 EGFSLELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDF 392
+G + + ++ R S + K G +V +G +G T VA++ L G T + F
Sbjct: 3 QGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGT---TRVAIKTLKPG--TMSPEAF 57
Query: 393 ESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAAL--HAGPSDSLPPLPWE 450
E + + +++H +V+L A + + ++++++ GSL L G LP L
Sbjct: 58 LQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQL--- 113
Query: 451 ARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVT 510
+ ++ A G+ Y+ + YVH ++++ IL+ + L ++ FGL RL +
Sbjct: 114 --VDMSAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARL------IE 162
Query: 511 KNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGP 569
NE G I + APEA +YG +FT K DV+SFGI+L E+ T GR+P G
Sbjct: 163 DNEWTARQGAKFPIK-----WTAPEAALYG-RFTIKSDVWSFGILLTELTTKGRVPYPGM 216
Query: 570 ENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRM 629
N + + V + +R P P + +H + C +PE RP
Sbjct: 217 VN--REVLDQVERGYRMPCP------PECPESLH---------DLMCQCWRKEPEERPTF 259
Query: 630 RTVSESLD 637
+ L+
Sbjct: 260 EYLQAFLE 267
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 114/234 (48%), Gaps = 29/234 (12%)
Query: 341 DLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIA 400
++ R S + K G +V +G +G T VA++ L G T + F E + +
Sbjct: 4 EIPRESLRLEVKLGQGCFGEVWMGTWNGT---TRVAIKTLKPG--TMSPEAFLQEAQVMK 58
Query: 401 RVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAAL--HAGPSDSLPPLPWEARLKIAQG 458
+++H +V+L A + + ++++++ GSL L G LP L + +A
Sbjct: 59 KLRHEKLVQLYAVV-SEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQL-----VDMAAQ 112
Query: 459 TARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTS 518
A G+ Y+ + YVH ++++ IL+ + L ++ FGL RL + NE
Sbjct: 113 IASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARL------IEDNEXTARQ 163
Query: 519 GTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPEN 571
G I + APEA +YG +FT K DV+SFGI+L E+ T GR+P G N
Sbjct: 164 GAKFPIK-----WTAPEAALYG-RFTIKSDVWSFGILLTELTTKGRVPYPGMVN 211
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 97/202 (48%), Gaps = 25/202 (12%)
Query: 373 TVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL 432
T VAV+ L G T + F E + +QH +VRL A + +I++++ GSL
Sbjct: 38 TKVAVKTLKPG--TMSVQAFLEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSL 95
Query: 433 YAALHA--GPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDEL 490
L + G LP L + + A G+ YI + Y+H ++++ +L+ + L
Sbjct: 96 LDFLKSDEGGKVLLPKL-----IDFSAQIAEGMAYIER---KNYIHRDLRAANVLVSESL 147
Query: 491 HPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVY 550
I+ FGL R+ + NE G I + APEA +G FT K DV+
Sbjct: 148 MCKIADFGLARV------IEDNEYTAREGAKFPIK-----WTAPEAINFGC-FTIKSDVW 195
Query: 551 SFGIVLLEILT-GRLPDAGPEN 571
SFGI+L EI+T G++P G N
Sbjct: 196 SFGILLYEIVTYGKIPYPGRTN 217
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 97/202 (48%), Gaps = 25/202 (12%)
Query: 373 TVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL 432
T VAV+ L G T + F E + +QH +VRL A + +I++F+ GSL
Sbjct: 37 TKVAVKTLKPG--TMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSL 94
Query: 433 YAALHA--GPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDEL 490
L + G LP L + + A G+ YI + Y+H ++++ +L+ + L
Sbjct: 95 LDFLKSDEGGKVLLPKL-----IDFSAQIAEGMAYIER---KNYIHRDLRAANVLVSESL 146
Query: 491 HPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVY 550
I+ FGL R+ + NE G I + APEA +G FT K +V+
Sbjct: 147 MCKIADFGLARV------IEDNEYTAREGAKFPIK-----WTAPEAINFGC-FTIKSNVW 194
Query: 551 SFGIVLLEILT-GRLPDAGPEN 571
SFGI+L EI+T G++P G N
Sbjct: 195 SFGILLYEIVTYGKIPYPGRTN 216
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 120/273 (43%), Gaps = 49/273 (17%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
VA++ L G + +DF E + + HPNI+RL+ + +++++ + NGSL +
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDS 135
Query: 435 ALHAGPSDSLPPLPWEARLKIAQ------GTARGLMYIHEYSPRKYVHGNIKSTKILLDD 488
L +A+ + Q G A G+ Y+ + VH ++ + IL++
Sbjct: 136 FLRKH----------DAQFTVIQLVGMLRGIASGMKYLSDMGA---VHRDLAARNILINS 182
Query: 489 ELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCD 548
L +S FGL+R+L E + +R I + +PEA Y KFT D
Sbjct: 183 NLVCKVSDFGLSRVL---------EDDPEAAYTTRGGKIPIRWTSPEAIAY-RKFTSASD 232
Query: 549 VYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVID-PALVKEIHAKR 606
V+S+GIVL E+++ G P N V KA E L +D PA
Sbjct: 233 VWSYGIVLWEVMSYGERPYWEMSNQD------VIKAVDEGYRLPPPMDCPA--------- 277
Query: 607 QVLATFHIALNCTELDPEFRPRMRTVSESLDRV 639
A + + L+C + D RP+ + LD++
Sbjct: 278 ---ALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 139/308 (45%), Gaps = 46/308 (14%)
Query: 333 EGFSLELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDF 392
+G + + ++ R S + K G +V +G +G T VA++ L G T + F
Sbjct: 3 QGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGT---TRVAIKTLKPG--TMSPEAF 57
Query: 393 ESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAAL--HAGPSDSLPPLPWE 450
E + + +++H +V+L A + + ++++++ GSL L G LP L
Sbjct: 58 LQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQL--- 113
Query: 451 ARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVT 510
+ ++ A G+ Y+ + YVH ++++ IL+ + L ++ FGL RL +
Sbjct: 114 --VDMSAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARL------IE 162
Query: 511 KNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGP 569
NE G I + APEA +YG +FT K DV+SFGI+L E+ T GR+P G
Sbjct: 163 DNEYTARQGAKFPIK-----WTAPEAALYG-RFTIKSDVWSFGILLTELTTKGRVPYPGM 216
Query: 570 ENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRM 629
N + + V + +R P P + +H + C +PE RP
Sbjct: 217 VN--REVLDQVERGYRMPCP------PECPESLH---------DLMCQCWRKEPEERPTF 259
Query: 630 RTVSESLD 637
+ L+
Sbjct: 260 EYLQAFLE 267
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 117/272 (43%), Gaps = 47/272 (17%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
VA++ L G + +DF SE + + HPNI+ L+ ++I++++ NGSL A
Sbjct: 60 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 119
Query: 435 ALHAGPSDSLPPLPWEARLKIAQ------GTARGLMYIHEYSPRKYVHGNIKSTKILLDD 488
L + R + Q G G+ Y+ + S VH ++ + IL++
Sbjct: 120 FLRKN----------DGRFTVIQLVGMLRGIGSGMKYLSDMSA---VHRDLAARNILVNS 166
Query: 489 ELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCD 548
L +S FG++R+L E + +R I + APEA Y KFT D
Sbjct: 167 NLVCKVSDFGMSRVL---------EDDPEAAYTTRGGKIPIRWTAPEAIAY-RKFTSASD 216
Query: 549 VYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQ 607
V+S+GIV+ E+++ G P N V KA E L +D
Sbjct: 217 VWSYGIVMWEVMSYGERPYWDMSNQD------VIKAIEEGYRLPPPMDCP---------- 260
Query: 608 VLATFHIALNCTELDPEFRPRMRTVSESLDRV 639
+A + L+C + + RP+ + LD++
Sbjct: 261 -IALHQLMLDCWQKERSDRPKFGQIVNMLDKL 291
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 138/308 (44%), Gaps = 46/308 (14%)
Query: 333 EGFSLELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDF 392
+G + + ++ R S + K G +V +G +G T VA++ L G T + F
Sbjct: 172 QGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGT---TRVAIKTLKPG--TMSPEAF 226
Query: 393 ESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAAL--HAGPSDSLPPLPWE 450
E + + +++H +V+L A + + ++ +++ GSL L G LP L
Sbjct: 227 LQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQL--- 282
Query: 451 ARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVT 510
+ +A A G+ Y+ + YVH ++++ IL+ + L ++ FGL RL +
Sbjct: 283 --VDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARL------IE 331
Query: 511 KNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGP 569
NE G I + APEA +YG +FT K DV+SFGI+L E+ T GR+P G
Sbjct: 332 DNEYTARQGAKFPIK-----WTAPEAALYG-RFTIKSDVWSFGILLTELTTKGRVPYPGM 385
Query: 570 ENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRM 629
N + + V + +R P P + +H + C +PE RP
Sbjct: 386 VN--REVLDQVERGYRMPCP------PECPESLH---------DLMCQCWRKEPEERPTF 428
Query: 630 RTVSESLD 637
+ L+
Sbjct: 429 EYLQAFLE 436
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 137/308 (44%), Gaps = 46/308 (14%)
Query: 333 EGFSLELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDF 392
+G + + ++ R S + K G +V +G +G T VA++ L G T + F
Sbjct: 6 QGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGT---TRVAIKTLKPG--TMSPEAF 60
Query: 393 ESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHA--GPSDSLPPLPWE 450
E + + +++H +V+L A + + ++ +++ G L L G LP L
Sbjct: 61 LQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQL--- 116
Query: 451 ARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVT 510
+ +A A G+ Y+ + YVH ++++ IL+ + L ++ FGL RL +
Sbjct: 117 --VDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARL------IE 165
Query: 511 KNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGP 569
NE G I + APEA +YG +FT K DV+SFGI+L E+ T GR+P G
Sbjct: 166 DNEYTARQGAKFPIK-----WTAPEAALYG-RFTIKSDVWSFGILLTELTTKGRVPYPGM 219
Query: 570 ENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRM 629
N + + V + +R P P + +H + C DPE RP
Sbjct: 220 VN--REVLDQVERGYRMPCP------PECPESLH---------DLMCQCWRKDPEERPTF 262
Query: 630 RTVSESLD 637
+ L+
Sbjct: 263 EYLQAFLE 270
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 110/230 (47%), Gaps = 25/230 (10%)
Query: 335 FSLELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTV-VAVRRLTEGDATWRFKDFE 393
F+ EL+ V+G + G +V GR G V VA++ L G + +DF
Sbjct: 36 FAKELDASCIKIERVIGAGEFG---EVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFL 92
Query: 394 SEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAAL--HAGPSDSLPPLPWEA 451
E + + HPN+V L+ +++ +F+ NG+L A L H G +
Sbjct: 93 CEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVI------Q 146
Query: 452 RLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTK 511
+ + +G A G+ Y+ + YVH ++ + IL++ L +S FGL+R+ +
Sbjct: 147 LVGMLRGIAAGMRYLADMG---YVHRDLAARNILVNSNLVCKVSDFGLSRV------IED 197
Query: 512 NETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT 561
+ V + TG +I + APEA Y KFT DV+S+GIV+ E+++
Sbjct: 198 DPEAVYTTTGGKIPV---RWTAPEAIQY-RKFTSASDVWSYGIVMWEVMS 243
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 112/231 (48%), Gaps = 29/231 (12%)
Query: 344 RASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ 403
R S + K G +V +G +G T VA++ L G T + F E + + +++
Sbjct: 10 RESLRLEVKLGQGCFGEVWMGTWNGT---TRVAIKTLKPG--TMSPEAFLQEAQVMKKLR 64
Query: 404 HPNIVRLKAFYYANDEKLLISDFIRNGSLYAAL--HAGPSDSLPPLPWEARLKIAQGTAR 461
H +V+L A + + ++++++ GSL L G LP L + +A A
Sbjct: 65 HEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQL-----VDMAAQIAS 118
Query: 462 GLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTG 521
G+ Y+ + YVH ++++ IL+ + L ++ FGL RL + NE G
Sbjct: 119 GMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARL------IEDNEYTARQGAK 169
Query: 522 SRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPEN 571
I + APEA +YG +FT K DV+SFGI+L E+ T GR+P G N
Sbjct: 170 FPIK-----WTAPEAALYG-RFTIKSDVWSFGILLTELTTKGRVPYPGMVN 214
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 110/237 (46%), Gaps = 29/237 (12%)
Query: 332 DEGFSLELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT-WRFK 390
D + E+E + +G G +YK G+ G VAV+ L D T +F+
Sbjct: 26 DSSYYWEIEASEVMLSTRIGSGSFGTVYK---GKWHG-----DVAVKILKVVDPTPEQFQ 77
Query: 391 DFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWE 450
F +EV + + +H NI+ Y D +++ + SLY LH +
Sbjct: 78 AFRNEVAVLRKTRHVNILLFMG-YMTKDNLAIVTQWCEGSSLYKHLHVQETK----FQMF 132
Query: 451 ARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVT 510
+ IA+ TA+G+ Y+H + +H ++KS I L + L I FGL + S
Sbjct: 133 QLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQ 189
Query: 511 KNETIVTSGTGSRISAISNVYLAPEA-RIYGSK-FTQKCDVYSFGIVLLEILTGRLP 565
+ V TGS + ++APE R+ + F+ + DVYS+GIVL E++TG LP
Sbjct: 190 Q----VEQPTGSVL------WMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELP 236
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 119/270 (44%), Gaps = 43/270 (15%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
VA++ L G + +DF E + + HPNI+ L+ + +++++++ NGSL
Sbjct: 53 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDT 112
Query: 435 ALHAGPSDSLPPLPWEARLKIAQ--GTARGLMYIHEY-SPRKYVHGNIKSTKILLDDELH 491
L + + + Q G RG+ +Y S YVH ++ + IL++ L
Sbjct: 113 FLKKN----------DGQFTVIQLVGMLRGISAGMKYLSDMGYVHRDLAARNILINSNLV 162
Query: 492 PCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYS 551
+S FGL+R+L E + +R I + APEA I KFT DV+S
Sbjct: 163 CKVSDFGLSRVL---------EDDPEAAYTTRGGKIPIRWTAPEA-IAFRKFTSASDVWS 212
Query: 552 FGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVID-PALVKEIHAKRQVL 609
+GIV+ E+++ G P N V KA E L +D PA
Sbjct: 213 YGIVMWEVVSYGERPYWEMTNQD------VIKAVEEGYRLPSPMDCPA------------ 254
Query: 610 ATFHIALNCTELDPEFRPRMRTVSESLDRV 639
A + + L+C + + RP+ + LD++
Sbjct: 255 ALYQLMLDCWQKERNSRPKFDEIVNMLDKL 284
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 122/268 (45%), Gaps = 53/268 (19%)
Query: 373 TVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL 432
T VAV+ + G + + F +E + +QH +V+L A + +I++F+ GSL
Sbjct: 207 TKVAVKTMKPGSMS--VEAFLAEANVMKTLQHDKLVKLHAVV-TKEPIYIITEFMAKGSL 263
Query: 433 YAALHA--GPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDEL 490
L + G LP L + + A G+ +I + R Y+H ++++ IL+ L
Sbjct: 264 LDFLKSDEGSKQPLPKL-----IDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASL 315
Query: 491 HPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVY 550
I+ FGL R+ G++ + APEA +GS FT K DV+
Sbjct: 316 VCKIADFGLARV------------------GAKFPI---KWTAPEAINFGS-FTIKSDVW 353
Query: 551 SFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVL 609
SFGI+L+EI+T GR+P G N + + +L R +R RP E L
Sbjct: 354 SFGILLMEIVTYGRIPYPGMSNP-EVIRALER-GYRMPRP--ENCPEEL----------- 398
Query: 610 ATFHIALNCTELDPEFRPRMRTVSESLD 637
++I + C + PE RP + LD
Sbjct: 399 --YNIMMRCWKNRPEERPTFEYIQSVLD 424
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 29/204 (14%)
Query: 373 TVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL 432
V A R + D + ++ E + A ++HPNI+ L+ L+ +F R G L
Sbjct: 34 AVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPL 93
Query: 433 YAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHP 492
L +PP + + A ARG+ Y+H+ + +H ++KS+ IL+ ++
Sbjct: 94 NRVLSG---KRIPP---DILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVEN 147
Query: 493 C--------ISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFT 544
I+ FGL R T+K++ +A + ++APE I S F+
Sbjct: 148 GDLSNKILKITDFGLAREWHRTTKMS--------------AAGAYAWMAPEV-IRASMFS 192
Query: 545 QKCDVYSFGIVLLEILTGRLPDAG 568
+ DV+S+G++L E+LTG +P G
Sbjct: 193 KGSDVWSYGVLLWELLTGEVPFRG 216
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 108/226 (47%), Gaps = 35/226 (15%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA------TWRFKDFESEVEAIARVQ 403
+GK G+++K G + +VVA++ L GD+ +F++F+ EV ++ +
Sbjct: 27 IGKGGFGLVHK-----GRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN 81
Query: 404 HPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGL 463
HPNIV+L + + ++ +F+ G LY L D P+ W +L++ A G+
Sbjct: 82 HPNIVKLYGLMH--NPPRMVMEFVPCGDLYHRL----LDKAHPIKWSVKLRLMLDIALGI 135
Query: 464 MYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSR 523
Y+ +P VH +++S I L L+ P +KV + ++ S
Sbjct: 136 EYMQNQNP-PIVHRDLRSPNIFLQ----------SLDENAPVCAKVA-DFSLSQQSVHSV 183
Query: 524 ISAISNV-YLAPEARIYGSK---FTQKCDVYSFGIVLLEILTGRLP 565
+ N ++APE G++ +T+K D YSF ++L ILTG P
Sbjct: 184 SGLLGNFQWMAPET--IGAEEESYTEKADTYSFAMILYTILTGEGP 227
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 116/238 (48%), Gaps = 29/238 (12%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT-WRFKDFESEVEAIARVQHPNIV 408
+G G +YK G+ G VAV+ L T + + F++EV + + +H NI+
Sbjct: 20 IGSGSFGTVYK---GKWHG-----DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 71
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHE 468
L Y + +++ + SLY LHA + + + IA+ TARG+ Y+H
Sbjct: 72 -LFMGYSTKPQLAIVTQWCEGSSLYHHLHASET----KFEMKKLIDIARQTARGMDYLH- 125
Query: 469 YSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAIS 528
+ +H ++KS I L ++ I FGL + S + E + SG S
Sbjct: 126 --AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQL--SG--------S 173
Query: 529 NVYLAPEA-RIYGSK-FTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAF 584
+++APE R+ S ++ + DVY+FGIVL E++TG+LP + N + +E + R +
Sbjct: 174 ILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSL 231
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 104/227 (45%), Gaps = 37/227 (16%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA------TWRFKDFESEVEAIARVQ 403
+GK G+++K G + +VVA++ L GD+ +F++F+ EV ++ +
Sbjct: 27 IGKGGFGLVHK-----GRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN 81
Query: 404 HPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGL 463
HPNIV+L + + ++ +F+ G LY L D P+ W +L++ A G+
Sbjct: 82 HPNIVKLYGLMH--NPPRMVMEFVPCGDLYHRL----LDKAHPIKWSVKLRLMLDIALGI 135
Query: 464 MYIHEYSPRKYVHGNIKSTKILLD--DELHPC---ISGFGLNRLLPGTSKVTKNETIVTS 518
Y+ +P VH +++S I L DE P ++ FGL ++ S
Sbjct: 136 EYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFGL----------SQQSVHSVS 184
Query: 519 GTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
G ++ + E Y T+K D YSF ++L ILTG P
Sbjct: 185 GLLGNFQWMAPETIGAEEESY----TEKADTYSFAMILYTILTGEGP 227
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 132/296 (44%), Gaps = 46/296 (15%)
Query: 349 VVGKSKNGIMYK-VVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNI 407
V+G G +YK + V G + P VA++ L E +F E +A + HP++
Sbjct: 22 VLGSGAFGTVYKGIWVPEGETVKIP--VAIKILNETTGPKANVEFMDEALIMASMDHPHL 79
Query: 408 VRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSD--SLPPLPWEARLKIAQGTARGLMY 465
VRL + +L ++ + +G L +H + S L W ++ A+G+MY
Sbjct: 80 VRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI------AKGMMY 132
Query: 466 IHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRIS 525
+ E R+ VH ++ + +L+ H I+ FGL RLL G K + G ++
Sbjct: 133 LEE---RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEK-------EYNADGGKMP 182
Query: 526 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT--GRLPDAGPENDGKGLESLVRKA 583
++A E I+ KFT + DV+S+G+ + E++T G+ D P + + L+ K
Sbjct: 183 I---KWMALEC-IHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTRE---IPDLLEKG 235
Query: 584 FRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 639
R +P ID + + + C +D + RP+ + ++ R+
Sbjct: 236 ERLPQPPICTID---------------VYMVMVKCWMIDADSRPKFKELAAEFSRM 276
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 109/230 (47%), Gaps = 43/230 (18%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA------TWRFKDFESEVEAIARVQ 403
+GK G+++K G + +VVA++ L GD+ +F++F+ EV ++ +
Sbjct: 27 IGKGGFGLVHK-----GRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN 81
Query: 404 HPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGL 463
HPNIV+L + + ++ +F+ G LY L D P+ W +L++ A G+
Sbjct: 82 HPNIVKLYGLMH--NPPRMVMEFVPCGDLYHRL----LDKAHPIKWSVKLRLMLDIALGI 135
Query: 464 MYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSR 523
Y+ +P VH +++S I L L+ P +KV T +
Sbjct: 136 EYMQNQNP-PIVHRDLRSPNIFLQS----------LDENAPVCAKVADFGT-----SQQS 179
Query: 524 ISAISNV-----YLAPEARIYGSK---FTQKCDVYSFGIVLLEILTGRLP 565
+ ++S + ++APE G++ +T+K D YSF ++L ILTG P
Sbjct: 180 VHSVSGLLGNFQWMAPET--IGAEEESYTEKADTYSFAMILYTILTGEGP 227
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 98/203 (48%), Gaps = 26/203 (12%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLY 433
+VAV+ L E + R +DF+ E E + +QH +IVR L++ +++R+G L
Sbjct: 73 LVAVKALKEASESAR-QDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLN 131
Query: 434 ---------AALHAGPSDSLP-PLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTK 483
A L AG D P PL L +A A G++Y+ + +VH ++ +
Sbjct: 132 RFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRN 188
Query: 484 ILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKF 543
L+ L I FG++R + T G R + + ++ PE+ +Y KF
Sbjct: 189 CLVGQGLVVKIGDFGMSRDIYSTDYYR---------VGGR-TMLPIRWMPPESILY-RKF 237
Query: 544 TQKCDVYSFGIVLLEILT-GRLP 565
T + DV+SFG+VL EI T G+ P
Sbjct: 238 TTESDVWSFGVVLWEIFTYGKQP 260
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 106/213 (49%), Gaps = 21/213 (9%)
Query: 375 VAVRRLTEGDAT-WRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLY 433
VAV+ L T + + F++EV + + +H NI+ L Y + +++ + SLY
Sbjct: 49 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLY 107
Query: 434 AALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPC 493
LHA S + + IA+ TARG+ Y+H + +H ++KS I L ++
Sbjct: 108 HHLHA----SETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVK 160
Query: 494 ISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEA-RIYGSK-FTQKCDVYS 551
I FGL T+ S ++S S +++APE R+ S ++ + DVY+
Sbjct: 161 IGDFGL---------ATEKSRWSGSHQFEQLSG-SILWMAPEVIRMQDSNPYSFQSDVYA 210
Query: 552 FGIVLLEILTGRLPDAGPENDGKGLESLVRKAF 584
FGIVL E++TG+LP + N + +E + R +
Sbjct: 211 FGIVLYELMTGQLPYSNINNRDQIIEMVGRGSL 243
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 131/296 (44%), Gaps = 46/296 (15%)
Query: 349 VVGKSKNGIMYK-VVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNI 407
V+G G +YK + V G + P VA++ L E +F E +A + HP++
Sbjct: 45 VLGSGAFGTVYKGIWVPEGETVKIP--VAIKILNETTGPKANVEFMDEALIMASMDHPHL 102
Query: 408 VRLKAFYYANDEKLLISDFIRNGSL--YAALHAGPSDSLPPLPWEARLKIAQGTARGLMY 465
VRL + +L ++ + +G L Y H S L W ++ A+G+MY
Sbjct: 103 VRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI------AKGMMY 155
Query: 466 IHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRIS 525
+ E R+ VH ++ + +L+ H I+ FGL RLL G K + G ++
Sbjct: 156 LEE---RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEK-------EYNADGGKMP 205
Query: 526 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT--GRLPDAGPENDGKGLESLVRKA 583
++A E I+ KFT + DV+S+G+ + E++T G+ D P + + L+ K
Sbjct: 206 I---KWMALEC-IHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTRE---IPDLLEKG 258
Query: 584 FRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 639
R +P ID + + + C +D + RP+ + ++ R+
Sbjct: 259 ERLPQPPICTID---------------VYMVMVKCWMIDADSRPKFKELAAEFSRM 299
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 98/201 (48%), Gaps = 24/201 (11%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLY 433
+VAV+ L + R KDF E E + +QH +IV+ D +++ +++++G L
Sbjct: 45 LVAVKTLKDASDNAR-KDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLN 103
Query: 434 AALHAGPSDSL------PP--LPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKIL 485
L A D++ PP L L IAQ A G++Y+ + + +VH ++ + L
Sbjct: 104 KFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYL---ASQHFVHRDLATRNCL 160
Query: 486 LDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQ 545
+ + L I FG++R + T G + I ++ PE+ +Y KFT
Sbjct: 161 VGENLLVKIGDFGMSRDVYSTDYYRVG--------GHTMLPIR--WMPPESIMY-RKFTT 209
Query: 546 KCDVYSFGIVLLEILT-GRLP 565
+ DV+S G+VL EI T G+ P
Sbjct: 210 ESDVWSLGVVLWEIFTYGKQP 230
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 98/203 (48%), Gaps = 26/203 (12%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLY 433
+VAV+ L E + R +DF+ E E + +QH +IVR L++ +++R+G L
Sbjct: 50 LVAVKALKEASESAR-QDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLN 108
Query: 434 ---------AALHAGPSDSLP-PLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTK 483
A L AG D P PL L +A A G++Y+ + +VH ++ +
Sbjct: 109 RFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRN 165
Query: 484 ILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKF 543
L+ L I FG++R + T G R + + ++ PE+ +Y KF
Sbjct: 166 CLVGQGLVVKIGDFGMSRDIYSTDYYR---------VGGR-TMLPIRWMPPESILY-RKF 214
Query: 544 TQKCDVYSFGIVLLEILT-GRLP 565
T + DV+SFG+VL EI T G+ P
Sbjct: 215 TTESDVWSFGVVLWEIFTYGKQP 237
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 114/235 (48%), Gaps = 29/235 (12%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT-WRFKDFESEVEAIARVQHPNIV 408
+G G +YK G+ G VAV+ L T + + F++EV + + +H NI+
Sbjct: 32 IGSGSFGTVYK---GKWHG-----DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 83
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHE 468
+ A + +++ + SLY LHA + + + IA+ TARG+ Y+H
Sbjct: 84 LFMGYSTA-PQLAIVTQWCEGSSLYHHLHASET----KFEMKKLIDIARQTARGMDYLH- 137
Query: 469 YSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAIS 528
+ +H ++KS I L ++ I FGL T+ S ++S S
Sbjct: 138 --AKSIIHRDLKSNNIFLHEDNTVKIGDFGL---------ATEKSRWSGSHQFEQLSG-S 185
Query: 529 NVYLAPEA-RIYGSK-FTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVR 581
+++APE R+ S ++ + DVY+FGIVL E++TG+LP + N + +E + R
Sbjct: 186 ILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGR 240
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 98/203 (48%), Gaps = 26/203 (12%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLY 433
+VAV+ L E + R +DF+ E E + +QH +IVR L++ +++R+G L
Sbjct: 44 LVAVKALKEASESAR-QDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLN 102
Query: 434 ---------AALHAGPSDSLP-PLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTK 483
A L AG D P PL L +A A G++Y+ + +VH ++ +
Sbjct: 103 RFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRN 159
Query: 484 ILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKF 543
L+ L I FG++R + T G R + + ++ PE+ +Y KF
Sbjct: 160 CLVGQGLVVKIGDFGMSRDIYSTDYYR---------VGGR-TMLPIRWMPPESILY-RKF 208
Query: 544 TQKCDVYSFGIVLLEILT-GRLP 565
T + DV+SFG+VL EI T G+ P
Sbjct: 209 TTESDVWSFGVVLWEIFTYGKQP 231
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 115/238 (48%), Gaps = 30/238 (12%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKD---FESEVEAIARVQHP 405
V+G+ G ++ +V + SG A + A++ L + AT + +D + E + + V HP
Sbjct: 31 VLGQGSFGKVF--LVKKISGSDARQLYAMKVLKK--ATLKVRDRVRTKMERDILVEVNHP 86
Query: 406 NIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMY 465
IV+L + + LI DF+R G L+ L S + + + +A+ A L +
Sbjct: 87 FIVKLHYAFQTEGKLYLILDFLRGGDLFTRL----SKEVMFTEEDVKFYLAE-LALALDH 141
Query: 466 IHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRIS 525
+H ++ ++K ILLD+E H ++ FGL++ + +E S G+
Sbjct: 142 LHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK------ESIDHEKKAYSFCGT--- 189
Query: 526 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKA 583
Y+APE + TQ D +SFG+++ E+LTG LP G D K +++ KA
Sbjct: 190 ---VEYMAPEV-VNRRGHTQSADWWSFGVLMFEMLTGTLPFQG--KDRKETMTMILKA 241
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 115/238 (48%), Gaps = 30/238 (12%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKD---FESEVEAIARVQHP 405
V+G+ G ++ +V + SG A + A++ L + AT + +D + E + + V HP
Sbjct: 31 VLGQGSFGKVF--LVKKISGSDARQLYAMKVLKK--ATLKVRDRVRTKMERDILVEVNHP 86
Query: 406 NIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMY 465
IV+L + + LI DF+R G L+ L S + + + +A+ A L +
Sbjct: 87 FIVKLHYAFQTEGKLYLILDFLRGGDLFTRL----SKEVMFTEEDVKFYLAE-LALALDH 141
Query: 466 IHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRIS 525
+H ++ ++K ILLD+E H ++ FGL++ + +E S G+
Sbjct: 142 LHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK------ESIDHEKKAYSFCGT--- 189
Query: 526 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKA 583
Y+APE + TQ D +SFG+++ E+LTG LP G D K +++ KA
Sbjct: 190 ---VEYMAPEV-VNRRGHTQSADWWSFGVLMFEMLTGTLPFQG--KDRKETMTMILKA 241
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 115/238 (48%), Gaps = 30/238 (12%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKD---FESEVEAIARVQHP 405
V+G+ G ++ +V + SG A + A++ L + AT + +D + E + + V HP
Sbjct: 32 VLGQGSFGKVF--LVKKISGSDARQLYAMKVLKK--ATLKVRDRVRTKMERDILVEVNHP 87
Query: 406 NIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMY 465
IV+L + + LI DF+R G L+ L S + + + +A+ A L +
Sbjct: 88 FIVKLHYAFQTEGKLYLILDFLRGGDLFTRL----SKEVMFTEEDVKFYLAE-LALALDH 142
Query: 466 IHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRIS 525
+H ++ ++K ILLD+E H ++ FGL++ + +E S G+
Sbjct: 143 LHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK------ESIDHEKKAYSFCGT--- 190
Query: 526 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKA 583
Y+APE + TQ D +SFG+++ E+LTG LP G D K +++ KA
Sbjct: 191 ---VEYMAPEV-VNRRGHTQSADWWSFGVLMFEMLTGTLPFQG--KDRKETMTMILKA 242
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 106/225 (47%), Gaps = 29/225 (12%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT-WRFKDFESEVEAIARVQHPNIV 408
+G G +YK G+ G VAV+ L T + + F++EV + + +H NI+
Sbjct: 21 IGSGSFGTVYK---GKWHG-----DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 72
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHE 468
Y + +++ + SLY LH + + IA+ TA+G+ Y+H
Sbjct: 73 LFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLH- 126
Query: 469 YSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAIS 528
+ +H ++KS I L ++L I FGL + S + E + SG S
Sbjct: 127 --AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQL--SG--------S 174
Query: 529 NVYLAPEARIYGSK--FTQKCDVYSFGIVLLEILTGRLPDAGPEN 571
+++APE K ++ + DVY+FGIVL E++TG+LP + N
Sbjct: 175 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 219
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 106/225 (47%), Gaps = 29/225 (12%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT-WRFKDFESEVEAIARVQHPNIV 408
+G G +YK G+ G VAV+ L T + + F++EV + + +H NI+
Sbjct: 16 IGSGSFGTVYK---GKWHG-----DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHE 468
Y + +++ + SLY LH + + IA+ TA+G+ Y+H
Sbjct: 68 LFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLH- 121
Query: 469 YSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAIS 528
+ +H ++KS I L ++L I FGL + S + E + SG S
Sbjct: 122 --AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQL--SG--------S 169
Query: 529 NVYLAPEARIYGSK--FTQKCDVYSFGIVLLEILTGRLPDAGPEN 571
+++APE K ++ + DVY+FGIVL E++TG+LP + N
Sbjct: 170 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 214
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 106/225 (47%), Gaps = 29/225 (12%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT-WRFKDFESEVEAIARVQHPNIV 408
+G G +YK G+ G VAV+ L T + + F++EV + + +H NI+
Sbjct: 21 IGSGSFGTVYK---GKWHG-----DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 72
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHE 468
Y + +++ + SLY LH + + IA+ TA+G+ Y+H
Sbjct: 73 LFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLH- 126
Query: 469 YSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAIS 528
+ +H ++KS I L ++L I FGL + S + E + SG S
Sbjct: 127 --AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQL--SG--------S 174
Query: 529 NVYLAPEARIYGSK--FTQKCDVYSFGIVLLEILTGRLPDAGPEN 571
+++APE K ++ + DVY+FGIVL E++TG+LP + N
Sbjct: 175 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 219
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 106/225 (47%), Gaps = 29/225 (12%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT-WRFKDFESEVEAIARVQHPNIV 408
+G G +YK G+ G VAV+ L T + + F++EV + + +H NI+
Sbjct: 18 IGSGSFGTVYK---GKWHG-----DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 69
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHE 468
Y + +++ + SLY LH + + IA+ TA+G+ Y+H
Sbjct: 70 LFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLH- 123
Query: 469 YSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAIS 528
+ +H ++KS I L ++L I FGL + S + E + SG S
Sbjct: 124 --AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQL--SG--------S 171
Query: 529 NVYLAPEARIYGSK--FTQKCDVYSFGIVLLEILTGRLPDAGPEN 571
+++APE K ++ + DVY+FGIVL E++TG+LP + N
Sbjct: 172 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 216
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 107/225 (47%), Gaps = 29/225 (12%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT-WRFKDFESEVEAIARVQHPNIV 408
+G G +YK G+ G VAV+ L T + + F++EV + + +H NI+
Sbjct: 44 IGSGSFGTVYK---GKWHG-----DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 95
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHE 468
L Y + +++ + SLY LH + + IA+ TA+G+ Y+H
Sbjct: 96 -LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIET----KFEMIKLIDIARQTAQGMDYLHA 150
Query: 469 YSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAIS 528
S +H ++KS I L ++L I FGL + S + E + SG S
Sbjct: 151 KS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQL--SG--------S 197
Query: 529 NVYLAPEARIYGSK--FTQKCDVYSFGIVLLEILTGRLPDAGPEN 571
+++APE K ++ + DVY+FGIVL E++TG+LP + N
Sbjct: 198 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 242
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 106/225 (47%), Gaps = 29/225 (12%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT-WRFKDFESEVEAIARVQHPNIV 408
+G G +YK G+ G VAV+ L T + + F++EV + + +H NI+
Sbjct: 43 IGSGSFGTVYK---GKWHG-----DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 94
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHE 468
Y + +++ + SLY LH + + IA+ TA+G+ Y+H
Sbjct: 95 LFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIET----KFEMIKLIDIARQTAQGMDYLHA 149
Query: 469 YSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAIS 528
S +H ++KS I L ++L I FGL + S + E + SG S
Sbjct: 150 KS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQL--SG--------S 196
Query: 529 NVYLAPEARIYGSK--FTQKCDVYSFGIVLLEILTGRLPDAGPEN 571
+++APE K ++ + DVY+FGIVL E++TG+LP + N
Sbjct: 197 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 241
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 132/317 (41%), Gaps = 59/317 (18%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+G+ + G + K G T VAV+ L E + +D SE + +V HP++++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALH----AGPSDSLP---------------PLPWE 450
L + LLI ++ + GSL L GP L
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 451 ARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVT 510
+ A ++G+ Y+ E K VH ++ + IL+ + IS FGL+R V
Sbjct: 151 DLISFAWQISQGMQYLAEM---KLVHRDLAARNILVAEGRKMKISDFGLSR------DVY 201
Query: 511 KNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT---GRLPDA 567
+ ++ V G I ++A E+ ++ +T + DV+SFG++L EI+T P
Sbjct: 202 EEDSYVKRSQGR----IPVKWMAIES-LFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI 256
Query: 568 GPENDGKGLESLVRKAFRERRP--LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEF 625
PE L +L++ R RP SE + + L C + +P+
Sbjct: 257 PPER----LFNLLKTGHRMERPDNCSE-----------------EMYRLMLQCWKQEPDK 295
Query: 626 RPRMRTVSESLDRVKLQ 642
RP +S+ L+++ ++
Sbjct: 296 RPVFADISKDLEKMMVK 312
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 132/317 (41%), Gaps = 59/317 (18%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+G+ + G + K G T VAV+ L E + +D SE + +V HP++++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALH----AGPSDSLP---------------PLPWE 450
L + LLI ++ + GSL L GP L
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 451 ARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVT 510
+ A ++G+ Y+ E K VH ++ + IL+ + IS FGL+R V
Sbjct: 151 DLISFAWQISQGMQYLAEM---KLVHRDLAARNILVAEGRKMKISDFGLSR------DVY 201
Query: 511 KNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT---GRLPDA 567
+ ++ V G I ++A E+ ++ +T + DV+SFG++L EI+T P
Sbjct: 202 EEDSXVKRSQGR----IPVKWMAIES-LFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI 256
Query: 568 GPENDGKGLESLVRKAFRERRP--LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEF 625
PE L +L++ R RP SE + + L C + +P+
Sbjct: 257 PPER----LFNLLKTGHRMERPDNCSE-----------------EMYRLMLQCWKQEPDK 295
Query: 626 RPRMRTVSESLDRVKLQ 642
RP +S+ L+++ ++
Sbjct: 296 RPVFADISKDLEKMMVK 312
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 105/225 (46%), Gaps = 29/225 (12%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT-WRFKDFESEVEAIARVQHPNIV 408
+G G +YK G+ G VAV+ L T + + F++EV + + +H NI+
Sbjct: 16 IGSGSFGTVYK---GKWHG-----DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHE 468
Y + +++ + SLY LH + + IA+ TA+G+ Y+H
Sbjct: 68 LFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLH- 121
Query: 469 YSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAIS 528
+ +H ++KS I L ++L I FGL T+ S ++S S
Sbjct: 122 --AKSIIHRDLKSNNIFLHEDLTVKIGDFGL---------ATEKSRWSGSHQFEQLSG-S 169
Query: 529 NVYLAPEARIYGSK--FTQKCDVYSFGIVLLEILTGRLPDAGPEN 571
+++APE K ++ + DVY+FGIVL E++TG+LP + N
Sbjct: 170 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 214
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 105/225 (46%), Gaps = 29/225 (12%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT-WRFKDFESEVEAIARVQHPNIV 408
+G G +YK G+ G VAV+ L T + + F++EV + + +H NI+
Sbjct: 36 IGSGSFGTVYK---GKWHG-----DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 87
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHE 468
Y + +++ + SLY LH + + IA+ TA+G+ Y+H
Sbjct: 88 LFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIET----KFEMIKLIDIARQTAQGMDYLHA 142
Query: 469 YSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAIS 528
S +H ++KS I L ++L I FGL T+ S ++S S
Sbjct: 143 KS---IIHRDLKSNNIFLHEDLTVKIGDFGL---------ATEKSRWSGSHQFEQLSG-S 189
Query: 529 NVYLAPEARIYGSK--FTQKCDVYSFGIVLLEILTGRLPDAGPEN 571
+++APE K ++ + DVY+FGIVL E++TG+LP + N
Sbjct: 190 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 234
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 106/225 (47%), Gaps = 29/225 (12%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT-WRFKDFESEVEAIARVQHPNIV 408
+G G +YK G+ G VAV+ L T + + F++EV + + +H NI+
Sbjct: 44 IGSGSFGTVYK---GKWHG-----DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 95
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHE 468
L Y + +++ + SLY LH + + IA+ TA+G+ Y+H
Sbjct: 96 -LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIET----KFEMIKLIDIARQTAQGMDYLHA 150
Query: 469 YSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAIS 528
S +H ++KS I L ++L I FGL T+ S ++S S
Sbjct: 151 KS---IIHRDLKSNNIFLHEDLTVKIGDFGL---------ATEKSRWSGSHQFEQLSG-S 197
Query: 529 NVYLAPEARIYGSK--FTQKCDVYSFGIVLLEILTGRLPDAGPEN 571
+++APE K ++ + DVY+FGIVL E++TG+LP + N
Sbjct: 198 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 242
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 132/317 (41%), Gaps = 59/317 (18%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+G+ + G + K G T VAV+ L E + +D SE + +V HP++++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALH----AGPSDSLP---------------PLPWE 450
L + LLI ++ + GSL L GP L
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 451 ARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVT 510
+ A ++G+ Y+ E S VH ++ + IL+ + IS FGL+R V
Sbjct: 151 DLISFAWQISQGMQYLAEMS---LVHRDLAARNILVAEGRKMKISDFGLSR------DVY 201
Query: 511 KNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT---GRLPDA 567
+ ++ V G I ++A E+ ++ +T + DV+SFG++L EI+T P
Sbjct: 202 EEDSXVKRSQGR----IPVKWMAIES-LFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI 256
Query: 568 GPENDGKGLESLVRKAFRERRP--LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEF 625
PE L +L++ R RP SE + + L C + +P+
Sbjct: 257 PPER----LFNLLKTGHRMERPDNCSE-----------------EMYRLMLQCWKQEPDK 295
Query: 626 RPRMRTVSESLDRVKLQ 642
RP +S+ L+++ ++
Sbjct: 296 RPVFADISKDLEKMMVK 312
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 107/225 (47%), Gaps = 29/225 (12%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT-WRFKDFESEVEAIARVQHPNIV 408
+G G +YK G+ G VAV+ L T + + F++EV + + +H NI+
Sbjct: 16 IGSGSFGTVYK---GKWHG-----DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHE 468
+ A + +++ + SLY LH + + IA+ TA+G+ Y+H
Sbjct: 68 LFMGYSTA-PQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLH- 121
Query: 469 YSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAIS 528
+ +H ++KS I L ++L I FGL + S + E + SG S
Sbjct: 122 --AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQL--SG--------S 169
Query: 529 NVYLAPEARIYGSK--FTQKCDVYSFGIVLLEILTGRLPDAGPEN 571
+++APE K ++ + DVY+FGIVL E++TG+LP + N
Sbjct: 170 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 214
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 95/208 (45%), Gaps = 33/208 (15%)
Query: 373 TVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL 432
T+VAV+ L E + DF+ E +A +PNIV+L L+ +++ G L
Sbjct: 78 TMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDL 137
Query: 433 YAALHAGPSDSL-------------------PPLPWEARLKIAQGTARGLMYIHEYSPRK 473
L + ++ PPL +L IA+ A G+ Y+ E RK
Sbjct: 138 NEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE---RK 194
Query: 474 YVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLA 533
+VH ++ + L+ + + I+ FGL+R + + G AI ++
Sbjct: 195 FVHRDLATRNCLVGENMVVKIADFGLSR------NIYSADYYKADGN----DAIPIRWMP 244
Query: 534 PEARIYGSKFTQKCDVYSFGIVLLEILT 561
PE+ I+ +++T + DV+++G+VL EI +
Sbjct: 245 PES-IFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 98/204 (48%), Gaps = 27/204 (13%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLY 433
+VAV+ L + R KDF+ E E + +QH +IV+ D +++ +++++G L
Sbjct: 47 LVAVKALKDPTLAAR-KDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLN 105
Query: 434 AALHAGPSDSLPPLPWEAR-----------LKIAQGTARGLMYIHEYSPRKYVHGNIKST 482
L A D++ + + R L IA A G++Y+ + + +VH ++ +
Sbjct: 106 KFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYL---ASQHFVHRDLATR 162
Query: 483 KILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSK 542
L+ L I FG++R V + G + + ++ PE+ +Y K
Sbjct: 163 NCLVGANLLVKIGDFGMSR------DVYSTDYYRVGGH----TMLPIRWMPPESIMY-RK 211
Query: 543 FTQKCDVYSFGIVLLEILT-GRLP 565
FT + DV+SFG++L EI T G+ P
Sbjct: 212 FTTESDVWSFGVILWEIFTYGKQP 235
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 121/282 (42%), Gaps = 47/282 (16%)
Query: 370 GAPTVVAVRRLTEGDATWR-FKDFESEVEAIARVQHPNIVRLKAFYYANDEK-----LLI 423
G VAV+ + +++ R ++F SE + HPN++RL + ++I
Sbjct: 60 GTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVI 119
Query: 424 SDFIRNGSL-----YAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGN 478
F++ G L Y+ L GP +P + LK A G+ Y+ S R ++H +
Sbjct: 120 LPFMKYGDLHTYLLYSRLETGPKH----IPLQTLLKFMVDIALGMEYL---SNRNFLHRD 172
Query: 479 IKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARI 538
+ + +L D++ C++ FGL++ + + RI+ + ++A E+ +
Sbjct: 173 LAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQG----------RIAKMPVKWIAIES-L 221
Query: 539 YGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPA 597
+T K DV++FG+ + EI T G P G +N + + R ++P + +D
Sbjct: 222 ADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQN--HEMYDYLLHGHRLKQP-EDCLD-- 276
Query: 598 LVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 639
+ I +C DP RP + L+++
Sbjct: 277 ------------ELYEIMYSCWRTDPLDRPTFSVLRLQLEKL 306
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 110/237 (46%), Gaps = 41/237 (17%)
Query: 362 VVGRGSGMGAPTVVAVRRLTEGD------------ATWRFKD---FESEVEAIARVQHPN 406
V+G+GS V VR++T D AT + +D + E + +A V HP
Sbjct: 35 VLGQGS---FGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPF 91
Query: 407 IVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYI 466
+V+L + + LI DF+R G L+ L S + + + +A+ A GL ++
Sbjct: 92 VVKLHYAFQTEGKLYLILDFLRGGDLFTRL----SKEVMFTEEDVKFYLAE-LALGLDHL 146
Query: 467 HEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISA 526
H ++ ++K ILLD+E H ++ FGL++ + +E S G
Sbjct: 147 HSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK------EAIDHEKKAYSFCG----- 192
Query: 527 ISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKA 583
+ Y+APE + + D +S+G+++ E+LTG LP G D K +L+ KA
Sbjct: 193 -TVEYMAPEV-VNRQGHSHSADWWSYGVLMFEMLTGSLPFQG--KDRKETMTLILKA 245
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 102/217 (47%), Gaps = 23/217 (10%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLY 433
VAV+ L E T ++F E + ++HPN+V+L +I++F+ G+L
Sbjct: 247 TVAVKTLKED--TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 304
Query: 434 AALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPC 493
L + + L +A + + Y+ + + ++H N+ + L+ +
Sbjct: 305 DYLRECNRQEVSAV---VLLYMATQISSAMEYLEK---KNFIHRNLAARNCLVGENHLVK 358
Query: 494 ISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFG 553
++ FGL+RL+ G + T+ G++ + APE+ Y +KF+ K DV++FG
Sbjct: 359 VADFGLSRLMTGDT--------YTAHAGAKFPI---KWTAPESLAY-NKFSIKSDVWAFG 406
Query: 554 IVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 589
++L EI T G P G D + L+ K +R RP
Sbjct: 407 VLLWEIATYGMSPYPGI--DLSQVYELLEKDYRMERP 441
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 85/195 (43%), Gaps = 15/195 (7%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
VA++R+ + E++A+++ HPNIV + DE L+ + GS+
Sbjct: 43 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD 102
Query: 435 ALH---AGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELH 491
+ A L I + GL Y+H+ +H ++K+ ILL ++
Sbjct: 103 IIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGS 159
Query: 492 PCISGFGLNRLLPGTSKVTKNETIVT-SGTGSRISAISNVYLAPEARIYGSKFTQKCDVY 550
I+ FG++ L +T+N+ T GT ++APE + K D++
Sbjct: 160 VQIADFGVSAFLATGGDITRNKVRKTFVGT--------PCWMAPEVMEQVRGYDFKADIW 211
Query: 551 SFGIVLLEILTGRLP 565
SFGI +E+ TG P
Sbjct: 212 SFGITAIELATGAAP 226
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 102/217 (47%), Gaps = 23/217 (10%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLY 433
VAV+ L E T ++F E + ++HPN+V+L +I++F+ G+L
Sbjct: 244 TVAVKTLKED--TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 301
Query: 434 AALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPC 493
L + + L +A + + Y+ + + ++H N+ + L+ +
Sbjct: 302 DYLRECNRQEVNAV---VLLYMATQISSAMEYLEK---KNFIHRNLAARNCLVGENHLVK 355
Query: 494 ISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFG 553
++ FGL+RL+ G + T+ G++ + APE+ Y +KF+ K DV++FG
Sbjct: 356 VADFGLSRLMTGDT--------YTAHAGAKFPI---KWTAPESLAY-NKFSIKSDVWAFG 403
Query: 554 IVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 589
++L EI T G P G D + L+ K +R RP
Sbjct: 404 VLLWEIATYGMSPYPGI--DLSQVYELLEKDYRMERP 438
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 102/217 (47%), Gaps = 23/217 (10%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLY 433
VAV+ L E T ++F E + ++HPN+V+L +I++F+ G+L
Sbjct: 286 TVAVKTLKED--TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 343
Query: 434 AALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPC 493
L + + L +A + + Y+ + + ++H N+ + L+ +
Sbjct: 344 DYLRECNRQEVNAV---VLLYMATQISSAMEYLEK---KNFIHRNLAARNCLVGENHLVK 397
Query: 494 ISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFG 553
++ FGL+RL+ G + T+ G++ + APE+ Y +KF+ K DV++FG
Sbjct: 398 VADFGLSRLMTGDT--------YTAHAGAKFPI---KWTAPESLAY-NKFSIKSDVWAFG 445
Query: 554 IVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 589
++L EI T G P G D + L+ K +R RP
Sbjct: 446 VLLWEIATYGMSPYPGI--DLSQVYELLEKDYRMERP 480
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 84/194 (43%), Gaps = 13/194 (6%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
VA++R+ + E++A+++ HPNIV + DE L+ + GS+
Sbjct: 38 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD 97
Query: 435 ALH---AGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELH 491
+ A L I + GL Y+H+ +H ++K+ ILL ++
Sbjct: 98 IIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGS 154
Query: 492 PCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYS 551
I+ FG++ L +T+N+ + + ++APE + K D++S
Sbjct: 155 VQIADFGVSAFLATGGDITRNKV-------RKTFVGTPCWMAPEVMEQVRGYDFKADIWS 207
Query: 552 FGIVLLEILTGRLP 565
FGI +E+ TG P
Sbjct: 208 FGITAIELATGAAP 221
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 102/216 (47%), Gaps = 23/216 (10%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
VAV+ L E T ++F E + ++HPN+V+L +I++F+ G+L
Sbjct: 39 VAVKTLKED--TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 96
Query: 435 ALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCI 494
L + + L +A + + Y+ + + ++H ++ + L+ + +
Sbjct: 97 YLRECNRQEVSAV---VLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKV 150
Query: 495 SGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGI 554
+ FGL+RL+ G + T+ G++ + APE+ Y +KF+ K DV++FG+
Sbjct: 151 ADFGLSRLMTGDT--------FTAHAGAKFPI---KWTAPESLAY-NKFSIKSDVWAFGV 198
Query: 555 VLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 589
+L EI T G P G D + L+ K +R RP
Sbjct: 199 LLWEIATYGMSPYPGI--DPSQVYELLEKDYRMERP 232
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 102/216 (47%), Gaps = 23/216 (10%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
VAV+ L E T ++F E + ++HPN+V+L +I++F+ G+L
Sbjct: 39 VAVKTLKED--TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 96
Query: 435 ALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCI 494
L + + L +A + + Y+ + + ++H ++ + L+ + +
Sbjct: 97 YLRECNRQEVSAV---VLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKV 150
Query: 495 SGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGI 554
+ FGL+RL+ G + T+ G++ + APE+ Y +KF+ K DV++FG+
Sbjct: 151 ADFGLSRLMTGDTX--------TAHAGAKFPI---KWTAPESLAY-NKFSIKSDVWAFGV 198
Query: 555 VLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 589
+L EI T G P G D + L+ K +R RP
Sbjct: 199 LLWEIATYGMSPYPGI--DPSQVYELLEKDYRMERP 232
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 112/241 (46%), Gaps = 28/241 (11%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+G + G +Y+ V + S VAV+ L E T ++F E + ++HPN+V+
Sbjct: 26 LGGGQYGEVYEGVWKKYS-----LTVAVKTLKED--TMEVEEFLKEAAVMKEIKHPNLVQ 78
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEY 469
L +I++F+ G+L L + + L +A + + Y+ +
Sbjct: 79 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQISSAMEYLEK- 134
Query: 470 SPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISN 529
+ ++H ++ + L+ + ++ FGL+RL+ G + T+ G++
Sbjct: 135 --KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--------TAHAGAKFPI--- 181
Query: 530 VYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERR 588
+ APE+ Y +KF+ K DV++FG++L EI T G P G D + L+ K +R R
Sbjct: 182 KWTAPESLAY-NKFSIKSDVWAFGVLLWEIATYGMSPYPGI--DLSQVYELLEKDYRMER 238
Query: 589 P 589
P
Sbjct: 239 P 239
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 112/241 (46%), Gaps = 28/241 (11%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+G + G +Y+ V + S VAV+ L E T ++F E + ++HPN+V+
Sbjct: 26 LGGGQYGEVYEGVWKKYS-----LTVAVKTLKED--TMEVEEFLKEAAVMKEIKHPNLVQ 78
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEY 469
L +I++F+ G+L L + + L +A + + Y+ +
Sbjct: 79 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQISSAMEYLEK- 134
Query: 470 SPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISN 529
+ ++H ++ + L+ + ++ FGL+RL+ G + T+ G++
Sbjct: 135 --KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--------YTAHAGAKFPI--- 181
Query: 530 VYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERR 588
+ APE+ Y +KF+ K DV++FG++L EI T G P G D + L+ K +R R
Sbjct: 182 KWTAPESLAY-NKFSIKSDVWAFGVLLWEIATYGMSPYPGI--DLSQVYELLEKDYRMER 238
Query: 589 P 589
P
Sbjct: 239 P 239
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 102/216 (47%), Gaps = 23/216 (10%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
VAV+ L E T ++F E + ++HPN+V+L +I++F+ G+L
Sbjct: 46 VAVKTLKED--TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 103
Query: 435 ALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCI 494
L + + L +A + + Y+ + + ++H ++ + L+ + +
Sbjct: 104 YLRECNRQEVSAV---VLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKV 157
Query: 495 SGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGI 554
+ FGL+RL+ G + T+ G++ + APE+ Y +KF+ K DV++FG+
Sbjct: 158 ADFGLSRLMTGDT--------YTAHAGAKFPI---KWTAPESLAY-NKFSIKSDVWAFGV 205
Query: 555 VLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 589
+L EI T G P G D + L+ K +R RP
Sbjct: 206 LLWEIATYGMSPYPGI--DLSQVYELLEKDYRMERP 239
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 112/267 (41%), Gaps = 27/267 (10%)
Query: 370 GAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEK--LLISDFI 427
G +VAV+ L EG ++ E+E + + H +IV+ K EK L+ +++
Sbjct: 35 GTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYV 94
Query: 428 RNGSLYAALHAGPSDSLP--PLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKIL 485
GSL D LP + L AQ G+ Y+H + Y+H + + +L
Sbjct: 95 PLGSL--------RDYLPRHCVGLAQLLLFAQQICEGMAYLH---AQHYIHRALAARNVL 143
Query: 486 LDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQ 545
LD++ I FGL + +P + + V S + + APE + KF
Sbjct: 144 LDNDRLVKIGDFGLAKAVPEGHEYYR----VREDGDSPV-----FWYAPEC-LKECKFYY 193
Query: 546 KCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAK 605
DV+SFG+ L E+LT + P L + R L+E+++ +
Sbjct: 194 ASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLR-LTELLERG-ERLPRPD 251
Query: 606 RQVLATFHIALNCTELDPEFRPRMRTV 632
R +H+ NC E + FRP + +
Sbjct: 252 RCPCEIYHLMKNCWETEASFRPTFQNL 278
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 112/267 (41%), Gaps = 27/267 (10%)
Query: 370 GAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEK--LLISDFI 427
G +VAV+ L EG ++ E+E + + H +IV+ K EK L+ +++
Sbjct: 36 GTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYV 95
Query: 428 RNGSLYAALHAGPSDSLP--PLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKIL 485
GSL D LP + L AQ G+ Y+H + Y+H + + +L
Sbjct: 96 PLGSL--------RDYLPRHCVGLAQLLLFAQQICEGMAYLH---AQHYIHRALAARNVL 144
Query: 486 LDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQ 545
LD++ I FGL + +P + + V S + + APE + KF
Sbjct: 145 LDNDRLVKIGDFGLAKAVPEGHEYYR----VREDGDSPV-----FWYAPEC-LKECKFYY 194
Query: 546 KCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAK 605
DV+SFG+ L E+LT + P L + R L+E+++ +
Sbjct: 195 ASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLR-LTELLERG-ERLPRPD 252
Query: 606 RQVLATFHIALNCTELDPEFRPRMRTV 632
R +H+ NC E + FRP + +
Sbjct: 253 RCPCEIYHLMKNCWETEASFRPTFQNL 279
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 102/216 (47%), Gaps = 23/216 (10%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
VAV+ L E T ++F E + ++HPN+V+L +I++F+ G+L
Sbjct: 41 VAVKTLKED--TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 98
Query: 435 ALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCI 494
L + + L +A + + Y+ + + ++H ++ + L+ + +
Sbjct: 99 YLRECNRQEVSAV---VLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKV 152
Query: 495 SGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGI 554
+ FGL+RL+ G + T+ G++ + APE+ Y +KF+ K DV++FG+
Sbjct: 153 ADFGLSRLMTGDT--------YTAHAGAKFPI---KWTAPESLAY-NKFSIKSDVWAFGV 200
Query: 555 VLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 589
+L EI T G P G D + L+ K +R RP
Sbjct: 201 LLWEIATYGMSPYPGI--DLSQVYELLEKDYRMERP 234
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 102/216 (47%), Gaps = 23/216 (10%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
VAV+ L E T ++F E + ++HPN+V+L +I++F+ G+L
Sbjct: 41 VAVKTLKED--TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 98
Query: 435 ALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCI 494
L + + L +A + + Y+ + + ++H ++ + L+ + +
Sbjct: 99 YLRECNRQEVSAV---VLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKV 152
Query: 495 SGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGI 554
+ FGL+RL+ G + T+ G++ + APE+ Y +KF+ K DV++FG+
Sbjct: 153 ADFGLSRLMTGDT--------YTAHAGAKFPI---KWTAPESLAY-NKFSIKSDVWAFGV 200
Query: 555 VLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 589
+L EI T G P G D + L+ K +R RP
Sbjct: 201 LLWEIATYGMSPYPGI--DLSQVYELLEKDYRMERP 234
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 104/228 (45%), Gaps = 23/228 (10%)
Query: 363 VGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLL 422
V G VAV+ L E T ++F E + ++HPN+V+L +
Sbjct: 29 VYEGVWKKYSLTVAVKTLKED--TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 86
Query: 423 ISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKST 482
I++F+ G+L L + + L +A + + Y+ + + ++H ++ +
Sbjct: 87 ITEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQISSAMEYLEK---KNFIHRDLAAR 140
Query: 483 KILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSK 542
L+ + ++ FGL+RL+ G + T+ G++ + APE+ Y +K
Sbjct: 141 NCLVGENHLVKVADFGLSRLMTGDT--------YTAHAGAKFPI---KWTAPESLAY-NK 188
Query: 543 FTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 589
F+ K DV++FG++L EI T G P G D + L+ K +R RP
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSPYPGI--DLSQVYELLEKDYRMERP 234
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 126/282 (44%), Gaps = 46/282 (16%)
Query: 370 GAPTVVAVRRL-TEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEK------LL 422
G+ VAV+ L + A+ ++F E + HP++ +L + K ++
Sbjct: 49 GSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMV 108
Query: 423 ISDFIRNGSLYAALHAGPSDSLP-PLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKS 481
I F+++G L+A L A P LP + ++ A G+ Y+ S R ++H ++ +
Sbjct: 109 ILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYL---SSRNFIHRDLAA 165
Query: 482 TKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNV---YLAPEARI 538
+L +++ C++ FGL+R + SG R S + +LA E+ +
Sbjct: 166 RNCMLAEDMTVCVADFGLSR-------------KIYSGDYYRQGCASKLPVKWLALES-L 211
Query: 539 YGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPA 597
+ +T DV++FG+ + EI+T G+ P AG EN + + + R ++P P
Sbjct: 212 ADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIEN--AEIYNYLIGGNRLKQP------PE 263
Query: 598 LVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 639
++E+ + + C DP+ RP + L+ +
Sbjct: 264 CMEEV---------YDLMYQCWSADPKQRPSFTCLRMELENI 296
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 112/241 (46%), Gaps = 28/241 (11%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+G + G +Y+ V + S VAV+ L E T ++F E + ++HPN+V+
Sbjct: 25 LGGGQYGEVYEGVWKKYS-----LTVAVKTLKED--TMEVEEFLKEAAVMKEIKHPNLVQ 77
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEY 469
L +I++F+ G+L L + + L +A + + Y+ +
Sbjct: 78 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQISSAMEYLEK- 133
Query: 470 SPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISN 529
+ ++H ++ + L+ + ++ FGL+RL+ G + T+ G++
Sbjct: 134 --KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--------YTAHAGAKFPI--- 180
Query: 530 VYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERR 588
+ APE+ Y +KF+ K DV++FG++L EI T G P G D + L+ K +R R
Sbjct: 181 KWTAPESLAY-NKFSIKSDVWAFGVLLWEIATYGMSPYPGI--DLSQVYELLEKDYRMER 237
Query: 589 P 589
P
Sbjct: 238 P 238
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 112/241 (46%), Gaps = 28/241 (11%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+G + G +Y+ V + S VAV+ L E T ++F E + ++HPN+V+
Sbjct: 34 LGGGQYGEVYEGVWKKYS-----LTVAVKTLKED--TMEVEEFLKEAAVMKEIKHPNLVQ 86
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEY 469
L +I++F+ G+L L + + L +A + + Y+ +
Sbjct: 87 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQISSAMEYLEK- 142
Query: 470 SPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISN 529
+ ++H ++ + L+ + ++ FGL+RL+ G + T+ G++
Sbjct: 143 --KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--------YTAHAGAKFPI--- 189
Query: 530 VYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERR 588
+ APE+ Y +KF+ K DV++FG++L EI T G P G D + L+ K +R R
Sbjct: 190 KWTAPESLAY-NKFSIKSDVWAFGVLLWEIATYGMSPYPGI--DLSQVYELLEKDYRMER 246
Query: 589 P 589
P
Sbjct: 247 P 247
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 102/216 (47%), Gaps = 23/216 (10%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
VAV+ L E T ++F E + ++HPN+V+L +I++F+ G+L
Sbjct: 46 VAVKTLKED--TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 103
Query: 435 ALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCI 494
L + + L +A + + Y+ + + ++H ++ + L+ + +
Sbjct: 104 YLRECNRQEVNAV---VLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKV 157
Query: 495 SGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGI 554
+ FGL+RL+ G + T+ G++ + APE+ Y +KF+ K DV++FG+
Sbjct: 158 ADFGLSRLMTGDT--------YTAHAGAKFPI---KWTAPESLAY-NKFSIKSDVWAFGV 205
Query: 555 VLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 589
+L EI T G P G D + L+ K +R RP
Sbjct: 206 LLWEIATYGMSPYPGI--DLSQVYELLEKDYRMERP 239
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 102/216 (47%), Gaps = 23/216 (10%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
VAV+ L E T ++F E + ++HPN+V+L +I++F+ G+L
Sbjct: 41 VAVKTLKED--TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 98
Query: 435 ALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCI 494
L + + L +A + + Y+ + + ++H ++ + L+ + +
Sbjct: 99 YLRECNRQEVNAV---VLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKV 152
Query: 495 SGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGI 554
+ FGL+RL+ G + T+ G++ + APE+ Y +KF+ K DV++FG+
Sbjct: 153 ADFGLSRLMTGDT--------YTAHAGAKFPI---KWTAPESLAY-NKFSIKSDVWAFGV 200
Query: 555 VLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 589
+L EI T G P G D + L+ K +R RP
Sbjct: 201 LLWEIATYGMSPYPGI--DLSQVYELLEKDYRMERP 234
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 102/216 (47%), Gaps = 23/216 (10%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
VAV+ L E T ++F E + ++HPN+V+L +I++F+ G+L
Sbjct: 43 VAVKTLKED--TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 100
Query: 435 ALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCI 494
L + + L +A + + Y+ + + ++H ++ + L+ + +
Sbjct: 101 YLRECNRQEVNAV---VLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKV 154
Query: 495 SGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGI 554
+ FGL+RL+ G + T+ G++ + APE+ Y +KF+ K DV++FG+
Sbjct: 155 ADFGLSRLMTGDT--------YTAHAGAKFPI---KWTAPESLAY-NKFSIKSDVWAFGV 202
Query: 555 VLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 589
+L EI T G P G D + L+ K +R RP
Sbjct: 203 LLWEIATYGMSPYPGI--DLSQVYELLEKDYRMERP 236
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 89/197 (45%), Gaps = 19/197 (9%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN--DEKLLISDFIRNGSL 432
VAV+ L D + E+E + + H NIV+ K + + LI +F+ +GSL
Sbjct: 53 VAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSL 112
Query: 433 YAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHP 492
L + + + +LK A +G+ Y+ R+YVH ++ + +L++ E
Sbjct: 113 KEYLPKNKNK----INLKQQLKYAVQICKGMDYL---GSRQYVHRDLAARNVLVESEHQV 165
Query: 493 CISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSF 552
I FGL + + + K V S + + APE + SKF DV+SF
Sbjct: 166 KIGDFGLTKAI----ETDKEXXTVKDDRDSPV-----FWYAPEC-LMQSKFYIASDVWSF 215
Query: 553 GIVLLEILTGRLPDAGP 569
G+ L E+LT D+ P
Sbjct: 216 GVTLHELLTYCDSDSSP 232
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 102/216 (47%), Gaps = 23/216 (10%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
VAV+ L E T ++F E + ++HPN+V+L +I++F+ G+L
Sbjct: 43 VAVKTLKED--TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 100
Query: 435 ALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCI 494
L + + L +A + + Y+ + + ++H ++ + L+ + +
Sbjct: 101 YLRECNRQEVNAV---VLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKV 154
Query: 495 SGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGI 554
+ FGL+RL+ G + T+ G++ + APE+ Y +KF+ K DV++FG+
Sbjct: 155 ADFGLSRLMTGDT--------YTAHAGAKFPI---KWTAPESLAY-NKFSIKSDVWAFGV 202
Query: 555 VLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 589
+L EI T G P G D + L+ K +R RP
Sbjct: 203 LLWEIATYGMSPYPGI--DLSQVYELLEKDYRMERP 236
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 89/197 (45%), Gaps = 19/197 (9%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN--DEKLLISDFIRNGSL 432
VAV+ L D + E+E + + H NIV+ K + + LI +F+ +GSL
Sbjct: 41 VAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSL 100
Query: 433 YAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHP 492
L + + + +LK A +G+ Y+ R+YVH ++ + +L++ E
Sbjct: 101 KEYLPKNKNK----INLKQQLKYAVQICKGMDYL---GSRQYVHRDLAARNVLVESEHQV 153
Query: 493 CISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSF 552
I FGL + + + K V S + + APE + SKF DV+SF
Sbjct: 154 KIGDFGLTKAI----ETDKEXXTVKDDRDSPV-----FWYAPEC-LMQSKFYIASDVWSF 203
Query: 553 GIVLLEILTGRLPDAGP 569
G+ L E+LT D+ P
Sbjct: 204 GVTLHELLTYCDSDSSP 220
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 102/216 (47%), Gaps = 23/216 (10%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
VAV+ L E T ++F E + ++HPN+V+L +I++F+ G+L
Sbjct: 42 VAVKTLKED--TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 99
Query: 435 ALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCI 494
L + + L +A + + Y+ + + ++H ++ + L+ + +
Sbjct: 100 YLRECNRQEVNAV---VLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKV 153
Query: 495 SGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGI 554
+ FGL+RL+ G + T+ G++ + APE+ Y +KF+ K DV++FG+
Sbjct: 154 ADFGLSRLMTGDT--------YTAPAGAKFPI---KWTAPESLAY-NKFSIKSDVWAFGV 201
Query: 555 VLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 589
+L EI T G P G D + L+ K +R RP
Sbjct: 202 LLWEIATYGMSPYPGI--DLSQVYELLEKDYRMERP 235
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 102/216 (47%), Gaps = 23/216 (10%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
VAV+ L E T ++F E + ++HPN+V+L +I++F+ G+L
Sbjct: 43 VAVKTLKED--TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 100
Query: 435 ALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCI 494
L + + L +A + + Y+ + + ++H ++ + L+ + +
Sbjct: 101 YLRECNRQEVNAV---VLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKV 154
Query: 495 SGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGI 554
+ FGL+RL+ G + T+ G++ + APE+ Y +KF+ K DV++FG+
Sbjct: 155 ADFGLSRLMTGDT--------YTAPAGAKFPI---KWTAPESLAY-NKFSIKSDVWAFGV 202
Query: 555 VLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 589
+L EI T G P G D + L+ K +R RP
Sbjct: 203 LLWEIATYGMSPYPGI--DLSQVYELLEKDYRMERP 236
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 101/222 (45%), Gaps = 35/222 (15%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
V+G G++Y+ + + VA++++ +G A FK+ E++ + ++ H NIV
Sbjct: 27 VIGNGSFGVVYQAKLCDSGEL-----VAIKKVLQGKA---FKN--RELQIMRKLDHCNIV 76
Query: 409 RLKAFYYANDEKL------LISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARG 462
RL+ F+Y++ EK L+ D++ A H + P+ + +L + Q R
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRS 134
Query: 463 LMYIHEYSPRKYVHGNIKSTKILLD-DELHPCISGFGLNRLLPGTSKVTKNETIVTSGTG 521
L YIH + H +IK +LLD D + FG ++ + E V+
Sbjct: 135 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFG------SAKQLVRGEPNVSY--- 182
Query: 522 SRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
S Y APE + +T DV+S G VL E+L G+
Sbjct: 183 ----ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 101/222 (45%), Gaps = 35/222 (15%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
V+G G++Y+ + + VA++++ +G A FK+ E++ + ++ H NIV
Sbjct: 27 VIGNGSFGVVYQAKLCDSGEL-----VAIKKVLQGKA---FKN--RELQIMRKLDHCNIV 76
Query: 409 RLKAFYYANDEKL------LISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARG 462
RL+ F+Y++ EK L+ D++ A H + P+ + +L + Q R
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRS 134
Query: 463 LMYIHEYSPRKYVHGNIKSTKILLD-DELHPCISGFGLNRLLPGTSKVTKNETIVTSGTG 521
L YIH + H +IK +LLD D + FG ++ + E V+
Sbjct: 135 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFG------SAKQLVRGEPNVSX--- 182
Query: 522 SRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
S Y APE + +T DV+S G VL E+L G+
Sbjct: 183 ----ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 101/216 (46%), Gaps = 23/216 (10%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
VAV+ L E T ++F E + ++HPN+V+L +I +F+ G+L
Sbjct: 39 VAVKTLKED--TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLD 96
Query: 435 ALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCI 494
L + + L +A + + Y+ + + ++H ++ + L+ + +
Sbjct: 97 YLRECNRQEVSAV---VLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKV 150
Query: 495 SGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGI 554
+ FGL+RL+ G + T+ G++ + APE+ Y +KF+ K DV++FG+
Sbjct: 151 ADFGLSRLMTGDTX--------TAHAGAKFPI---KWTAPESLAY-NKFSIKSDVWAFGV 198
Query: 555 VLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 589
+L EI T G P G D + L+ K +R RP
Sbjct: 199 LLWEIATYGMSPYPGI--DPSQVYELLEKDYRMERP 232
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 101/222 (45%), Gaps = 35/222 (15%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
V+G G++Y+ + + VA++++ +G A FK+ E++ + ++ H NIV
Sbjct: 27 VIGNGSFGVVYQAKLCDSGEL-----VAIKKVLQGKA---FKN--RELQIMRKLDHCNIV 76
Query: 409 RLKAFYYANDEKL------LISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARG 462
RL+ F+Y++ EK L+ D++ A H + P+ + +L + Q R
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRS 134
Query: 463 LMYIHEYSPRKYVHGNIKSTKILLD-DELHPCISGFGLNRLLPGTSKVTKNETIVTSGTG 521
L YIH + H +IK +LLD D + FG ++ + E V+
Sbjct: 135 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFG------SAKQLVRGEPNVSY--- 182
Query: 522 SRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
S Y APE + +T DV+S G VL E+L G+
Sbjct: 183 ----ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 101/216 (46%), Gaps = 23/216 (10%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
VAV+ L E T ++F E + ++HPN+V+L +I +F+ G+L
Sbjct: 41 VAVKTLKED--TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLD 98
Query: 435 ALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCI 494
L + + L +A + + Y+ + + ++H ++ + L+ + +
Sbjct: 99 YLRECNRQEVSAV---VLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKV 152
Query: 495 SGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGI 554
+ FGL+RL+ G + T+ G++ + APE+ Y +KF+ K DV++FG+
Sbjct: 153 ADFGLSRLMTGDT--------YTAHAGAKFPI---KWTAPESLAY-NKFSIKSDVWAFGV 200
Query: 555 VLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 589
+L EI T G P G D + L+ K +R RP
Sbjct: 201 LLWEIATYGMSPYPGI--DLSQVYELLEKDYRMERP 234
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 111/241 (46%), Gaps = 28/241 (11%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+G + G +Y+ V + S VAV+ L E T ++F E + ++HPN+V+
Sbjct: 26 LGGGQYGEVYEGVWKKYS-----LTVAVKTLKED--TMEVEEFLKEAAVMKEIKHPNLVQ 78
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEY 469
L +I +F+ G+L L + + L +A + + Y+ +
Sbjct: 79 LLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQISSAMEYLEK- 134
Query: 470 SPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISN 529
+ ++H ++ + L+ + ++ FGL+RL+ G + T+ G++
Sbjct: 135 --KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--------YTAHAGAKFPI--- 181
Query: 530 VYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERR 588
+ APE+ Y +KF+ K DV++FG++L EI T G P G D + L+ K +R R
Sbjct: 182 KWTAPESLAY-NKFSIKSDVWAFGVLLWEIATYGMSPYPGI--DLSQVYELLEKDYRMER 238
Query: 589 P 589
P
Sbjct: 239 P 239
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 101/216 (46%), Gaps = 23/216 (10%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
VAV+ L E T ++F E + ++HPN+V+L +I +F+ G+L
Sbjct: 42 VAVKTLKED--TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLD 99
Query: 435 ALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCI 494
L + + L +A + + Y+ + + ++H ++ + L+ + +
Sbjct: 100 YLRECNRQEVNAV---VLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKV 153
Query: 495 SGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGI 554
+ FGL+RL+ G + T+ G++ + APE+ Y +KF+ K DV++FG+
Sbjct: 154 ADFGLSRLMTGDTX--------TAHAGAKFPI---KWTAPESLAY-NKFSIKSDVWAFGV 201
Query: 555 VLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 589
+L EI T G P G D + L+ K +R RP
Sbjct: 202 LLWEIATYGMSPYPGI--DLSQVYELLEKDYRMERP 235
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 101/216 (46%), Gaps = 23/216 (10%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
VAV+ L E T ++F E + ++HPN+V+L +I +F+ G+L
Sbjct: 41 VAVKTLKED--TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLD 98
Query: 435 ALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCI 494
L + + L +A + + Y+ + + ++H ++ + L+ + +
Sbjct: 99 YLRECNRQEVSAV---VLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKV 152
Query: 495 SGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGI 554
+ FGL+RL+ G + T+ G++ + APE+ Y +KF+ K DV++FG+
Sbjct: 153 ADFGLSRLMTGDT--------YTAHAGAKFPI---KWTAPESLAY-NKFSIKSDVWAFGV 200
Query: 555 VLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 589
+L EI T G P G D + L+ K +R RP
Sbjct: 201 LLWEIATYGMSPYPGI--DLSQVYELLEKDYRMERP 234
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 100/200 (50%), Gaps = 26/200 (13%)
Query: 366 GSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYA--NDEKLLI 423
G GA +VAV++L + +DF+ E++ + + IV+ + Y E L+
Sbjct: 32 GDNTGA--LVAVKQLQHSGPDQQ-RDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLV 88
Query: 424 SDFIRNGSL--YAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKS 481
+++ +G L + H D+ L + +++ +G+ Y+ R+ VH ++ +
Sbjct: 89 MEYLPSGCLRDFLQRHRARLDASRLLLYSSQI------CKGMEYL---GSRRCVHRDLAA 139
Query: 482 TKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGS 541
IL++ E H I+ FGL +LLP + K+ +V S I + APE+ + +
Sbjct: 140 RNILVESEAHVKIADFGLAKLLP----LDKDXXVVREPGQSPI-----FWYAPES-LSDN 189
Query: 542 KFTQKCDVYSFGIVLLEILT 561
F+++ DV+SFG+VL E+ T
Sbjct: 190 IFSRQSDVWSFGVVLYELFT 209
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 100/222 (45%), Gaps = 35/222 (15%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
V+G G++Y+ + + VA++++ + RFK+ E++ + ++ H NIV
Sbjct: 28 VIGNGSFGVVYQAKLCDSGEL-----VAIKKVLQDK---RFKN--RELQIMRKLDHCNIV 77
Query: 409 RLKAFYYANDEKL------LISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARG 462
RL+ F+Y++ EK L+ D++ A H + P+ + +L + Q R
Sbjct: 78 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRS 135
Query: 463 LMYIHEYSPRKYVHGNIKSTKILLD-DELHPCISGFGLNRLLPGTSKVTKNETIVTSGTG 521
L YIH + H +IK +LLD D + FG ++ + E V+
Sbjct: 136 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFG------SAKQLVRGEPNVSX--- 183
Query: 522 SRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
S Y APE + +T DV+S G VL E+L G+
Sbjct: 184 ----ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 100/224 (44%), Gaps = 39/224 (17%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
V+G G++Y+ + + VA++++ + RFK+ E++ + ++ H NIV
Sbjct: 61 VIGNGSFGVVYQAKLCDSGEL-----VAIKKVLQDK---RFKN--RELQIMRKLDHCNIV 110
Query: 409 RLKAFYYANDEKL------LISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARG 462
RL+ F+Y++ EK L+ D++ A H + P+ + +L + Q R
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRS 168
Query: 463 LMYIHEYSPRKYVHGNIKSTKILLDDE---LHPCISGFGLNRLLPGTSKVTKNETIVTSG 519
L YIH + H +IK +LLD + L C G +L+ G V+
Sbjct: 169 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFG-SAKQLVRGEPNVS--------- 215
Query: 520 TGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
S Y APE + +T DV+S G VL E+L G+
Sbjct: 216 -----XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 100/222 (45%), Gaps = 35/222 (15%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
V+G G++Y+ + + VA++++ + RFK+ E++ + ++ H NIV
Sbjct: 35 VIGNGSFGVVYQAKLCDSGEL-----VAIKKVLQDK---RFKN--RELQIMRKLDHCNIV 84
Query: 409 RLKAFYYANDEKL------LISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARG 462
RL+ F+Y++ EK L+ D++ A H + P+ + +L + Q R
Sbjct: 85 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRS 142
Query: 463 LMYIHEYSPRKYVHGNIKSTKILLD-DELHPCISGFGLNRLLPGTSKVTKNETIVTSGTG 521
L YIH + H +IK +LLD D + FG ++ + E V+
Sbjct: 143 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFG------SAKQLVRGEPNVSX--- 190
Query: 522 SRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
S Y APE + +T DV+S G VL E+L G+
Sbjct: 191 ----ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 100/222 (45%), Gaps = 35/222 (15%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
V+G G++Y+ + + VA++++ + RFK+ E++ + ++ H NIV
Sbjct: 27 VIGNGSFGVVYQAKLCDSGEL-----VAIKKVLQDK---RFKN--RELQIMRKLDHCNIV 76
Query: 409 RLKAFYYANDEKL------LISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARG 462
RL+ F+Y++ EK L+ D++ A H + P+ + +L + Q R
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRS 134
Query: 463 LMYIHEYSPRKYVHGNIKSTKILLD-DELHPCISGFGLNRLLPGTSKVTKNETIVTSGTG 521
L YIH + H +IK +LLD D + FG ++ + E V+
Sbjct: 135 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFG------SAKQLVRGEPNVSX--- 182
Query: 522 SRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
S Y APE + +T DV+S G VL E+L G+
Sbjct: 183 ----ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 100/222 (45%), Gaps = 35/222 (15%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
V+G G++Y+ + + VA++++ + RFK+ E++ + ++ H NIV
Sbjct: 31 VIGNGSFGVVYQAKLCDSGEL-----VAIKKVLQDK---RFKN--RELQIMRKLDHCNIV 80
Query: 409 RLKAFYYANDEKL------LISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARG 462
RL+ F+Y++ EK L+ D++ A H + P+ + +L + Q R
Sbjct: 81 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRS 138
Query: 463 LMYIHEYSPRKYVHGNIKSTKILLD-DELHPCISGFGLNRLLPGTSKVTKNETIVTSGTG 521
L YIH + H +IK +LLD D + FG ++ + E V+
Sbjct: 139 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFG------SAKQLVRGEPNVSX--- 186
Query: 522 SRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
S Y APE + +T DV+S G VL E+L G+
Sbjct: 187 ----ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 100/222 (45%), Gaps = 35/222 (15%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
V+G G++Y+ + + VA++++ + RFK+ E++ + ++ H NIV
Sbjct: 39 VIGNGSFGVVYQAKLCDSGEL-----VAIKKVLQDK---RFKN--RELQIMRKLDHCNIV 88
Query: 409 RLKAFYYANDEKL------LISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARG 462
RL+ F+Y++ EK L+ D++ A H + P+ + +L + Q R
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRS 146
Query: 463 LMYIHEYSPRKYVHGNIKSTKILLD-DELHPCISGFGLNRLLPGTSKVTKNETIVTSGTG 521
L YIH + H +IK +LLD D + FG ++ + E V+
Sbjct: 147 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFG------SAKQLVRGEPNVSX--- 194
Query: 522 SRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
S Y APE + +T DV+S G VL E+L G+
Sbjct: 195 ----ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 100/222 (45%), Gaps = 35/222 (15%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
V+G G++Y+ + + VA++++ + RFK+ E++ + ++ H NIV
Sbjct: 27 VIGNGSFGVVYQAKLCDSGEL-----VAIKKVLQDK---RFKN--RELQIMRKLDHCNIV 76
Query: 409 RLKAFYYANDEKL------LISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARG 462
RL+ F+Y++ EK L+ D++ A H + P+ + +L + Q R
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRS 134
Query: 463 LMYIHEYSPRKYVHGNIKSTKILLD-DELHPCISGFGLNRLLPGTSKVTKNETIVTSGTG 521
L YIH + H +IK +LLD D + FG ++ + E V+
Sbjct: 135 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFG------SAKQLVRGEPNVSX--- 182
Query: 522 SRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
S Y APE + +T DV+S G VL E+L G+
Sbjct: 183 ----ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 100/224 (44%), Gaps = 39/224 (17%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
V+G G++Y+ + + VA++++ + RFK+ E++ + ++ H NIV
Sbjct: 39 VIGNGSFGVVYQAKLCDSGEL-----VAIKKVLQDK---RFKN--RELQIMRKLDHCNIV 88
Query: 409 RLKAFYYANDEKL------LISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARG 462
RL+ F+Y++ EK L+ D++ A H + P+ + +L + Q R
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRS 146
Query: 463 LMYIHEYSPRKYVHGNIKSTKILLDDE---LHPCISGFGLNRLLPGTSKVTKNETIVTSG 519
L YIH + H +IK +LLD + L C G +L+ G V+
Sbjct: 147 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFG-SAKQLVRGEPNVS--------- 193
Query: 520 TGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
S Y APE + +T DV+S G VL E+L G+
Sbjct: 194 -----XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 100/222 (45%), Gaps = 35/222 (15%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
V+G G++Y+ + + VA++++ + RFK+ E++ + ++ H NIV
Sbjct: 46 VIGNGSFGVVYQAKLCDSGEL-----VAIKKVLQDK---RFKN--RELQIMRKLDHCNIV 95
Query: 409 RLKAFYYANDEKL------LISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARG 462
RL+ F+Y++ EK L+ D++ A H + P+ + +L + Q R
Sbjct: 96 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRS 153
Query: 463 LMYIHEYSPRKYVHGNIKSTKILLD-DELHPCISGFGLNRLLPGTSKVTKNETIVTSGTG 521
L YIH + H +IK +LLD D + FG ++ + E V+
Sbjct: 154 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFG------SAKQLVRGEPNVSX--- 201
Query: 522 SRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
S Y APE + +T DV+S G VL E+L G+
Sbjct: 202 ----ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 100/222 (45%), Gaps = 35/222 (15%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
V+G G++Y+ + + VA++++ + RFK+ E++ + ++ H NIV
Sbjct: 27 VIGNGSFGVVYQAKLCDSGEL-----VAIKKVLQDK---RFKN--RELQIMRKLDHCNIV 76
Query: 409 RLKAFYYANDEKL------LISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARG 462
RL+ F+Y++ EK L+ D++ A H + P+ + +L + Q R
Sbjct: 77 RLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRS 134
Query: 463 LMYIHEYSPRKYVHGNIKSTKILLD-DELHPCISGFGLNRLLPGTSKVTKNETIVTSGTG 521
L YIH + H +IK +LLD D + FG ++ + E V+
Sbjct: 135 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFG------SAKQLVRGEPNVSX--- 182
Query: 522 SRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
S Y APE + +T DV+S G VL E+L G+
Sbjct: 183 ----ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 100/224 (44%), Gaps = 39/224 (17%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
V+G G++Y+ + + VA++++ + RFK+ E++ + ++ H NIV
Sbjct: 61 VIGNGSFGVVYQAKLCDSGEL-----VAIKKVLQDK---RFKN--RELQIMRKLDHCNIV 110
Query: 409 RLKAFYYANDEKL------LISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARG 462
RL+ F+Y++ EK L+ D++ A H + P+ + +L + Q R
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRS 168
Query: 463 LMYIHEYSPRKYVHGNIKSTKILLDDE---LHPCISGFGLNRLLPGTSKVTKNETIVTSG 519
L YIH + H +IK +LLD + L C G +L+ G V+
Sbjct: 169 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFG-SAKQLVRGEPNVS--------- 215
Query: 520 TGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
S Y APE + +T DV+S G VL E+L G+
Sbjct: 216 -----YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 100/224 (44%), Gaps = 39/224 (17%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
V+G G++Y+ + + VA++++ + RFK+ E++ + ++ H NIV
Sbjct: 63 VIGNGSFGVVYQAKLCDSGEL-----VAIKKVLQDK---RFKN--RELQIMRKLDHCNIV 112
Query: 409 RLKAFYYANDEKL------LISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARG 462
RL+ F+Y++ EK L+ D++ A H + P+ + +L + Q R
Sbjct: 113 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRS 170
Query: 463 LMYIHEYSPRKYVHGNIKSTKILLDDE---LHPCISGFGLNRLLPGTSKVTKNETIVTSG 519
L YIH + H +IK +LLD + L C G +L+ G V+
Sbjct: 171 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFG-SAKQLVRGEPNVS--------- 217
Query: 520 TGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
S Y APE + +T DV+S G VL E+L G+
Sbjct: 218 -----YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 100/222 (45%), Gaps = 35/222 (15%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
V+G G++Y+ + + VA++++ + RFK+ E++ + ++ H NIV
Sbjct: 40 VIGNGSFGVVYQAKLCDSGEL-----VAIKKVLQDK---RFKN--RELQIMRKLDHCNIV 89
Query: 409 RLKAFYYANDEKL------LISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARG 462
RL+ F+Y++ EK L+ D++ A H + P+ + +L + Q R
Sbjct: 90 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRS 147
Query: 463 LMYIHEYSPRKYVHGNIKSTKILLD-DELHPCISGFGLNRLLPGTSKVTKNETIVTSGTG 521
L YIH + H +IK +LLD D + FG ++ + E V+
Sbjct: 148 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFG------SAKQLVRGEPNVSY--- 195
Query: 522 SRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
S Y APE + +T DV+S G VL E+L G+
Sbjct: 196 ----ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 100/224 (44%), Gaps = 39/224 (17%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
V+G G++Y+ + + VA++++ + RFK+ E++ + ++ H NIV
Sbjct: 55 VIGNGSFGVVYQAKLCDSGEL-----VAIKKVLQDK---RFKN--RELQIMRKLDHCNIV 104
Query: 409 RLKAFYYANDEKL------LISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARG 462
RL+ F+Y++ EK L+ D++ A H + P+ + +L + Q R
Sbjct: 105 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRS 162
Query: 463 LMYIHEYSPRKYVHGNIKSTKILLDDE---LHPCISGFGLNRLLPGTSKVTKNETIVTSG 519
L YIH + H +IK +LLD + L C G +L+ G V+
Sbjct: 163 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFG-SAKQLVRGEPNVS--------- 209
Query: 520 TGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
S Y APE + +T DV+S G VL E+L G+
Sbjct: 210 -----YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 100/222 (45%), Gaps = 35/222 (15%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
V+G G++Y+ + + VA++++ + RFK+ E++ + ++ H NIV
Sbjct: 27 VIGNGSFGVVYQAKLCDSGEL-----VAIKKVLQDK---RFKN--RELQIMRKLDHCNIV 76
Query: 409 RLKAFYYANDEKL------LISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARG 462
RL+ F+Y++ EK L+ D++ A H + P+ + +L + Q R
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRS 134
Query: 463 LMYIHEYSPRKYVHGNIKSTKILLD-DELHPCISGFGLNRLLPGTSKVTKNETIVTSGTG 521
L YIH + H +IK +LLD D + FG ++ + E V+
Sbjct: 135 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFG------SAKQLVRGEPNVSY--- 182
Query: 522 SRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
S Y APE + +T DV+S G VL E+L G+
Sbjct: 183 ----ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 109/238 (45%), Gaps = 36/238 (15%)
Query: 333 EGFSLELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDF 392
+G + E ++ + V+G G++++ + VA++++ + RFK+
Sbjct: 31 DGKTGEQREIAYTNCKVIGNGSFGVVFQAKLVESDE------VAIKKVLQDK---RFKNR 81
Query: 393 ESEVEAIARVQHPNIVRLKAFYYANDEKL------LISDFIRNGSLYAALHAGPSDSLPP 446
E ++ I V+HPN+V LKAF+Y+N +K L+ +++ A+ H P
Sbjct: 82 ELQIMRI--VKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMP 139
Query: 447 LPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLP-G 505
+ +L + Q R L YIH H +IK +LLD G+ +L+ G
Sbjct: 140 M-LLIKLYMYQ-LLRSLAYIHSIG---ICHRDIKPQNLLLD-------PPSGVLKLIDFG 187
Query: 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
++K I+ +G + S Y APE + +T D++S G V+ E++ G+
Sbjct: 188 SAK------ILIAGEPNVSXICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 100/224 (44%), Gaps = 39/224 (17%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
V+G G++Y+ + + VA++++ + RFK+ E++ + ++ H NIV
Sbjct: 65 VIGNGSFGVVYQAKLCDSGEL-----VAIKKVLQDK---RFKN--RELQIMRKLDHCNIV 114
Query: 409 RLKAFYYANDEKL------LISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARG 462
RL+ F+Y++ EK L+ D++ A H + P+ + +L + Q R
Sbjct: 115 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRS 172
Query: 463 LMYIHEYSPRKYVHGNIKSTKILLDDE---LHPCISGFGLNRLLPGTSKVTKNETIVTSG 519
L YIH + H +IK +LLD + L C G +L+ G V+
Sbjct: 173 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFG-SAKQLVRGEPNVSY-------- 220
Query: 520 TGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
S Y APE + +T DV+S G VL E+L G+
Sbjct: 221 ------ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 100/224 (44%), Gaps = 39/224 (17%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
V+G G++Y+ + + VA++++ + RFK+ E++ + ++ H NIV
Sbjct: 32 VIGNGSFGVVYQAKLCDSGEL-----VAIKKVLQDK---RFKN--RELQIMRKLDHCNIV 81
Query: 409 RLKAFYYANDEKL------LISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARG 462
RL+ F+Y++ EK L+ D++ A H + P+ + +L + Q R
Sbjct: 82 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRS 139
Query: 463 LMYIHEYSPRKYVHGNIKSTKILLDDE---LHPCISGFGLNRLLPGTSKVTKNETIVTSG 519
L YIH + H +IK +LLD + L C G +L+ G V+
Sbjct: 140 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFG-SAKQLVRGEPNVS--------- 186
Query: 520 TGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
S Y APE + +T DV+S G VL E+L G+
Sbjct: 187 -----YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 100/224 (44%), Gaps = 39/224 (17%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
V+G G++Y+ + + VA++++ + RFK+ E++ + ++ H NIV
Sbjct: 106 VIGNGSFGVVYQAKLCDSGEL-----VAIKKVLQDK---RFKN--RELQIMRKLDHCNIV 155
Query: 409 RLKAFYYANDEKL------LISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARG 462
RL+ F+Y++ EK L+ D++ A H + P+ + +L + Q R
Sbjct: 156 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRS 213
Query: 463 LMYIHEYSPRKYVHGNIKSTKILLDDE---LHPCISGFGLNRLLPGTSKVTKNETIVTSG 519
L YIH + H +IK +LLD + L C G +L+ G V+
Sbjct: 214 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFG-SAKQLVRGEPNVSY-------- 261
Query: 520 TGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
S Y APE + +T DV+S G VL E+L G+
Sbjct: 262 ------ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 87/185 (47%), Gaps = 24/185 (12%)
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLK 454
E++ + P IV +Y++ E + + + GSL L +P E K
Sbjct: 64 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKR-----IPEEILGK 118
Query: 455 IAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNET 514
++ RGL Y+ E + +H ++K + IL++ + FG++ L ++
Sbjct: 119 VSIAVLRGLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQL--------IDS 168
Query: 515 IVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGK 574
+ S G+R Y+APE R+ G+ ++ + D++S G+ L+E+ GR P P D K
Sbjct: 169 MANSFVGTR------SYMAPE-RLQGTHYSVQSDIWSMGLSLVELAVGRYPIPPP--DAK 219
Query: 575 GLESL 579
LE++
Sbjct: 220 ELEAI 224
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 97/224 (43%), Gaps = 33/224 (14%)
Query: 416 ANDEKLLISDFIRNGSLYAALHAGPSDSL--PPLPWEARLKIAQGTARGLMYIHEYSPRK 473
+ E S F + SL SD P+ E + + ARG+ ++ S RK
Sbjct: 163 TSSESFASSGFQEDKSLSDVEEEEDSDGFYKEPITMEDLISYSFQVARGMEFL---SSRK 219
Query: 474 YVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLA 533
+H ++ + ILL + I FGL R + KN V G + + ++A
Sbjct: 220 CIHRDLAARNILLSENNVVKICDFGLAR------DIYKNPDYVRKGD----TRLPLKWMA 269
Query: 534 PEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSE 592
PE+ I+ ++ K DV+S+G++L EI + G P G + D + S +R+ R R P E
Sbjct: 270 PES-IFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMD-EDFCSRLREGMRMRAP--E 325
Query: 593 VIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESL 636
P + + I L+C DP+ RPR + E L
Sbjct: 326 YSTPEI-------------YQIMLDCWHRDPKERPRFAELVEKL 356
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 111/264 (42%), Gaps = 39/264 (14%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
VAV+ + EG + +F E + + ++ HP +V+ +++++I NG L
Sbjct: 35 VAVKMIKEGSMS--EDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLN 92
Query: 435 ALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCI 494
L + P E + +G A +++H ++ + L+D +L +
Sbjct: 93 YLRSHGKGLEPSQLLEMCYDVCEGMAF-------LESHQFIHRDLAARNCLVDRDLCVKV 145
Query: 495 SGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGI 554
S FG+ R V ++ + + GT + + APE Y K++ K DV++FGI
Sbjct: 146 SDFGMTRY------VLDDQYVSSVGTKFPVK-----WSAPEVFHY-FKYSSKSDVWAFGI 193
Query: 555 VLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFH 613
++ E+ + G++P N L+ V + R RP H + +
Sbjct: 194 LMWEVFSLGKMPYDLYTNSEVVLK--VSQGHRLYRP-------------HLASDTI--YQ 236
Query: 614 IALNCTELDPEFRPRMRTVSESLD 637
I +C PE RP + + S++
Sbjct: 237 IMYSCWHELPEKRPTFQQLLSSIE 260
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 100/200 (50%), Gaps = 26/200 (13%)
Query: 366 GSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEK--LLI 423
G GA +VAV++L + +DF+ E++ + + IV+ + Y + L+
Sbjct: 36 GDNTGA--LVAVKQLQHSGPDQQ-RDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLV 92
Query: 424 SDFIRNGSL--YAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKS 481
+++ +G L + H D+ L + +++ +G+ Y+ R+ VH ++ +
Sbjct: 93 MEYLPSGCLRDFLQRHRARLDASRLLLYSSQI------CKGMEYL---GSRRCVHRDLAA 143
Query: 482 TKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGS 541
IL++ E H I+ FGL +LLP + K+ +V S I + APE+ + +
Sbjct: 144 RNILVESEAHVKIADFGLAKLLP----LDKDYYVVREPGQSPI-----FWYAPES-LSDN 193
Query: 542 KFTQKCDVYSFGIVLLEILT 561
F+++ DV+SFG+VL E+ T
Sbjct: 194 IFSRQSDVWSFGVVLYELFT 213
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 100/200 (50%), Gaps = 26/200 (13%)
Query: 366 GSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEK--LLI 423
G GA +VAV++L + +DF+ E++ + + IV+ + Y + L+
Sbjct: 35 GDNTGA--LVAVKQLQHSGPDQQ-RDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLV 91
Query: 424 SDFIRNGSL--YAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKS 481
+++ +G L + H D+ L + +++ +G+ Y+ R+ VH ++ +
Sbjct: 92 MEYLPSGCLRDFLQRHRARLDASRLLLYSSQI------CKGMEYL---GSRRCVHRDLAA 142
Query: 482 TKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGS 541
IL++ E H I+ FGL +LLP + K+ +V S I + APE+ + +
Sbjct: 143 RNILVESEAHVKIADFGLAKLLP----LDKDYYVVREPGQSPI-----FWYAPES-LSDN 192
Query: 542 KFTQKCDVYSFGIVLLEILT 561
F+++ DV+SFG+VL E+ T
Sbjct: 193 IFSRQSDVWSFGVVLYELFT 212
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 100/200 (50%), Gaps = 26/200 (13%)
Query: 366 GSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEK--LLI 423
G GA +VAV++L + +DF+ E++ + + IV+ + Y + L+
Sbjct: 48 GDNTGA--LVAVKQLQHSGPDQQ-RDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLV 104
Query: 424 SDFIRNGSL--YAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKS 481
+++ +G L + H D+ L + +++ +G+ Y+ R+ VH ++ +
Sbjct: 105 MEYLPSGCLRDFLQRHRARLDASRLLLYSSQI------CKGMEYL---GSRRCVHRDLAA 155
Query: 482 TKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGS 541
IL++ E H I+ FGL +LLP + K+ +V S I + APE+ + +
Sbjct: 156 RNILVESEAHVKIADFGLAKLLP----LDKDYYVVREPGQSPI-----FWYAPES-LSDN 205
Query: 542 KFTQKCDVYSFGIVLLEILT 561
F+++ DV+SFG+VL E+ T
Sbjct: 206 IFSRQSDVWSFGVVLYELFT 225
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 126/289 (43%), Gaps = 46/289 (15%)
Query: 349 VVGKSKNGIMYK-VVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNI 407
V+G G +YK + + G + P VA++ L E + K+ E +A V +P++
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIP--VAIKELREATSPKANKEILDEAYVMASVDNPHV 81
Query: 408 VRLKAFYYANDEKLLISDFIRNGSL--YAALHAGPSDSLPPLPWEARLKIAQGTARGLMY 465
RL + +L I+ + G L Y H S L W ++ A+G+ Y
Sbjct: 82 CRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNY 134
Query: 466 IHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRIS 525
+ + R+ VH ++ + +L+ H I+ FGL +LL K E G ++
Sbjct: 135 LED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE-------GGKVP 184
Query: 526 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLP-DAGPENDGKGLESLVRKA 583
++A E+ I +T + DV+S+G+ + E++T G P D P ++ + S++ K
Sbjct: 185 I---KWMALES-ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSILEKG 237
Query: 584 FRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTV 632
R +P ID + I + C +D + RP+ R +
Sbjct: 238 ERLPQPPICTID---------------VYMIMVKCWMIDADSRPKFREL 271
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 126/289 (43%), Gaps = 46/289 (15%)
Query: 349 VVGKSKNGIMYK-VVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNI 407
V+G G +YK + + G + P VA++ L E + K+ E +A V +P++
Sbjct: 47 VLGSGAFGTVYKGLWIPEGEKVKIP--VAIKELREATSPKANKEILDEAYVMASVDNPHV 104
Query: 408 VRLKAFYYANDEKLLISDFIRNGSL--YAALHAGPSDSLPPLPWEARLKIAQGTARGLMY 465
RL + +L I+ + G L Y H S L W ++ A+G+ Y
Sbjct: 105 CRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNY 157
Query: 466 IHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRIS 525
+ + R+ VH ++ + +L+ H I+ FGL +LL K E G ++
Sbjct: 158 LED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE-------GGKVP 207
Query: 526 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLP-DAGPENDGKGLESLVRKA 583
++A E+ I +T + DV+S+G+ + E++T G P D P ++ + S++ K
Sbjct: 208 I---KWMALES-ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSILEKG 260
Query: 584 FRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTV 632
R +P ID + I + C +D + RP+ R +
Sbjct: 261 ERLPQPPICTID---------------VYMIMVKCWMIDADSRPKFREL 294
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 118/260 (45%), Gaps = 31/260 (11%)
Query: 319 DEEEGQKGKFFIIDEGFSLELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVR 378
DE++ ++ + F+ + EL+D +G G+++KV + SG+ V R
Sbjct: 45 DEQQRKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVS-HKPSGL-----VMAR 98
Query: 379 RLTEGDATWRFKD-FESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALH 437
+L + ++ E++ + P IV +Y++ E + + + GSL L
Sbjct: 99 KLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK 158
Query: 438 AGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGF 497
+P + K++ +GL Y+ E K +H ++K + IL++ + F
Sbjct: 159 KAGR-----IPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDF 211
Query: 498 GLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLL 557
G++ L +++ S G+R Y++PE R+ G+ ++ + D++S G+ L+
Sbjct: 212 GVSGQL--------IDSMANSFVGTR------SYMSPE-RLQGTHYSVQSDIWSMGLSLV 256
Query: 558 EILTGRLPDAGPENDGKGLE 577
E+ GR P P D K LE
Sbjct: 257 EMAVGRYPIPPP--DAKELE 274
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 126/289 (43%), Gaps = 46/289 (15%)
Query: 349 VVGKSKNGIMYK-VVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNI 407
V+G G +YK + + G + P VA++ L E + K+ E +A V +P++
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIP--VAIKELREATSPKANKEILDEAYVMASVDNPHV 79
Query: 408 VRLKAFYYANDEKLLISDFIRNGSL--YAALHAGPSDSLPPLPWEARLKIAQGTARGLMY 465
RL + +L I+ + G L Y H S L W ++ A+G+ Y
Sbjct: 80 CRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNY 132
Query: 466 IHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRIS 525
+ + R+ VH ++ + +L+ H I+ FGL +LL K E G ++
Sbjct: 133 LED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE-------GGKVP 182
Query: 526 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLP-DAGPENDGKGLESLVRKA 583
++A E+ I +T + DV+S+G+ + E++T G P D P ++ + S++ K
Sbjct: 183 I---KWMALES-ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSILEKG 235
Query: 584 FRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTV 632
R +P ID + I + C +D + RP+ R +
Sbjct: 236 ERLPQPPICTID---------------VYMIMVKCWMIDADSRPKFREL 269
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 126/289 (43%), Gaps = 46/289 (15%)
Query: 349 VVGKSKNGIMYK-VVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNI 407
V+G G +YK + + G + P VA++ L E + K+ E +A V +P++
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKVKIP--VAIKELREATSPKANKEILDEAYVMASVDNPHV 82
Query: 408 VRLKAFYYANDEKLLISDFIRNGSL--YAALHAGPSDSLPPLPWEARLKIAQGTARGLMY 465
RL + +L I+ + G L Y H S L W ++ A+G+ Y
Sbjct: 83 CRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNY 135
Query: 466 IHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRIS 525
+ + R+ VH ++ + +L+ H I+ FGL +LL K E G ++
Sbjct: 136 LED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE-------GGKVP 185
Query: 526 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLP-DAGPENDGKGLESLVRKA 583
++A E+ I +T + DV+S+G+ + E++T G P D P ++ + S++ K
Sbjct: 186 I---KWMALES-ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSILEKG 238
Query: 584 FRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTV 632
R +P ID + I + C +D + RP+ R +
Sbjct: 239 ERLPQPPICTID---------------VYMIMVKCWMIDADSRPKFREL 272
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 126/289 (43%), Gaps = 46/289 (15%)
Query: 349 VVGKSKNGIMYK-VVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNI 407
V+G G +YK + + G + P VA++ L E + K+ E +A V +P++
Sbjct: 28 VLGSGAFGTVYKGLWIPEGEKVKIP--VAIKELREATSPKANKEILDEAYVMASVDNPHV 85
Query: 408 VRLKAFYYANDEKLLISDFIRNGSL--YAALHAGPSDSLPPLPWEARLKIAQGTARGLMY 465
RL + +L I+ + G L Y H S L W ++ A+G+ Y
Sbjct: 86 CRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNY 138
Query: 466 IHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRIS 525
+ + R+ VH ++ + +L+ H I+ FGL +LL K E G ++
Sbjct: 139 LED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE-------GGKVP 188
Query: 526 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLP-DAGPENDGKGLESLVRKA 583
++A E+ I +T + DV+S+G+ + E++T G P D P ++ + S++ K
Sbjct: 189 I---KWMALES-ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSILEKG 241
Query: 584 FRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTV 632
R +P ID + I + C +D + RP+ R +
Sbjct: 242 ERLPQPPICTID---------------VYMIMVKCWMIDADSRPKFREL 275
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 126/289 (43%), Gaps = 46/289 (15%)
Query: 349 VVGKSKNGIMYK-VVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNI 407
V+G G +YK + + G + P VA++ L E + K+ E +A V +P++
Sbjct: 29 VLGSGAFGTVYKGLWIPEGEKVKIP--VAIKELREATSPKANKEILDEAYVMASVDNPHV 86
Query: 408 VRLKAFYYANDEKLLISDFIRNGSL--YAALHAGPSDSLPPLPWEARLKIAQGTARGLMY 465
RL + +L I+ + G L Y H S L W ++ A+G+ Y
Sbjct: 87 CRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNY 139
Query: 466 IHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRIS 525
+ + R+ VH ++ + +L+ H I+ FGL +LL K E G ++
Sbjct: 140 LED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE-------GGKVP 189
Query: 526 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLP-DAGPENDGKGLESLVRKA 583
++A E+ I +T + DV+S+G+ + E++T G P D P ++ + S++ K
Sbjct: 190 I---KWMALES-ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSILEKG 242
Query: 584 FRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTV 632
R +P ID + I + C +D + RP+ R +
Sbjct: 243 ERLPQPPICTID---------------VYMIMVKCWMIDADSRPKFREL 276
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 126/289 (43%), Gaps = 46/289 (15%)
Query: 349 VVGKSKNGIMYK-VVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNI 407
V+G G +YK + + G + P VA++ L E + K+ E +A V +P++
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKVKIP--VAIKELREATSPKANKEILDEAYVMASVDNPHV 82
Query: 408 VRLKAFYYANDEKLLISDFIRNGSL--YAALHAGPSDSLPPLPWEARLKIAQGTARGLMY 465
RL + +L I+ + G L Y H S L W ++ A+G+ Y
Sbjct: 83 CRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNY 135
Query: 466 IHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRIS 525
+ + R+ VH ++ + +L+ H I+ FGL +LL K E G ++
Sbjct: 136 LED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE-------GGKVP 185
Query: 526 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLP-DAGPENDGKGLESLVRKA 583
++A E+ I +T + DV+S+G+ + E++T G P D P ++ + S++ K
Sbjct: 186 I---KWMALES-ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSILEKG 238
Query: 584 FRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTV 632
R +P ID + I + C +D + RP+ R +
Sbjct: 239 ERLPQPPICTID---------------VYMIMVKCWMIDADSRPKFREL 272
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 105/235 (44%), Gaps = 37/235 (15%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNI 407
V+G+ G +V+ R G A++R+ E + +DF E+E + ++ HPNI
Sbjct: 29 VIGEGNFG---QVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 85
Query: 408 VRLK-----------AFYYANDEKLLISDFIRNGSLYAA--LHAGPSDSLPPLPWEARLK 454
+ L A YA LL DF+R + A + + L + L
Sbjct: 86 INLLGACEHRGYLYLAIEYAPHGNLL--DFLRKSRVLETDPAFAIANSTASTLSSQQLLH 143
Query: 455 IAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNET 514
A ARG+ Y+ S ++++H N+ + IL+ + I+ FGL+R +
Sbjct: 144 FAADVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSR----------GQE 190
Query: 515 IVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAG 568
+ T R+ ++A E+ Y S +T DV+S+G++L EI++ G P G
Sbjct: 191 VYVKKTMGRLPV---RWMAIESLNY-SVYTTNSDVWSYGVLLWEIVSLGGTPYCG 241
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 126/289 (43%), Gaps = 46/289 (15%)
Query: 349 VVGKSKNGIMYK-VVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNI 407
V+G G +YK + + G + P VA++ L E + K+ E +A V +P++
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIP--VAIKELREATSPKANKEILDEAYVMASVDNPHV 79
Query: 408 VRLKAFYYANDEKLLISDFIRNGSL--YAALHAGPSDSLPPLPWEARLKIAQGTARGLMY 465
RL + +L I+ + G L Y H S L W ++ A+G+ Y
Sbjct: 80 CRLLGICLTSTVQL-ITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQI------AKGMNY 132
Query: 466 IHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRIS 525
+ + R+ VH ++ + +L+ H I+ FGL +LL K E G ++
Sbjct: 133 LED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE-------GGKVP 182
Query: 526 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLP-DAGPENDGKGLESLVRKA 583
++A E+ I +T + DV+S+G+ + E++T G P D P ++ + S++ K
Sbjct: 183 I---KWMALES-ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSILEKG 235
Query: 584 FRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTV 632
R +P ID + I + C +D + RP+ R +
Sbjct: 236 ERLPQPPICTID---------------VYMIMVKCWMIDADSRPKFREL 269
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 117/268 (43%), Gaps = 44/268 (16%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKL-LISDFIRNGSLY 433
VAV+ + + DAT + F +E + +++H N+V+L L ++++++ GSL
Sbjct: 47 VAVKCI-KNDAT--AQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLV 103
Query: 434 AALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPC 493
L S L + LK + + Y+ +VH ++ + +L+ ++
Sbjct: 104 DYLR---SRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAK 157
Query: 494 ISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFG 553
+S FGL + E T TG + + APEA + KF+ K DV+SFG
Sbjct: 158 VSDFGLTK-----------EASSTQDTGK----LPVKWTAPEA-LREKKFSTKSDVWSFG 201
Query: 554 IVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATF 612
I+L EI + GR+P P K + V K ++ P + PA+ +
Sbjct: 202 ILLWEIYSFGRVP--YPRIPLKDVVPRVEKGYKMDAP--DGCPPAV-------------Y 244
Query: 613 HIALNCTELDPEFRPRMRTVSESLDRVK 640
+ NC LD RP + E L+ +K
Sbjct: 245 EVMKNCWHLDAAMRPSFLQLREQLEHIK 272
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 112/274 (40%), Gaps = 27/274 (9%)
Query: 370 GAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEK--LLISDFI 427
G +VAV+ L ++ E++ + + H +I++ K EK L+ +++
Sbjct: 41 GTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYV 100
Query: 428 RNGSLYAALHAGPSDSLP--PLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKIL 485
GSL D LP + L AQ G+ Y+H + Y+H N+ + +L
Sbjct: 101 PLGSL--------RDYLPRHSIGLAQLLLFAQQICEGMAYLHS---QHYIHRNLAARNVL 149
Query: 486 LDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQ 545
LD++ I FGL + +P + + V S + + APE + KF
Sbjct: 150 LDNDRLVKIGDFGLAKAVPEGHEYYR----VREDGDSPV-----FWYAPEC-LKEYKFYY 199
Query: 546 KCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAK 605
DV+SFG+ L E+LT P L + + R L+E+++ +
Sbjct: 200 ASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLR-LTELLERG-ERLPRPD 257
Query: 606 RQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 639
+ +H+ NC E + FRP + L V
Sbjct: 258 KCPCEVYHLMKNCWETEASFRPTFENLIPILKTV 291
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 102/216 (47%), Gaps = 23/216 (10%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
VAV+ L E T ++F E + ++HPN+V+L ++++++ G+L
Sbjct: 60 VAVKTLKED--TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLD 117
Query: 435 ALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCI 494
L + + + L +A + + Y+ + + ++H ++ + L+ + +
Sbjct: 118 YLRECNREEVTAV---VLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHVVKV 171
Query: 495 SGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGI 554
+ FGL+RL+ G + T+ G++ + APE+ Y + F+ K DV++FG+
Sbjct: 172 ADFGLSRLMTGDT--------YTAHAGAKFPI---KWTAPESLAYNT-FSIKSDVWAFGV 219
Query: 555 VLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP 589
+L EI T G P G D + L+ K +R +P
Sbjct: 220 LLWEIATYGMSPYPGI--DLSQVYDLLEKGYRMEQP 253
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 117/268 (43%), Gaps = 44/268 (16%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKL-LISDFIRNGSLY 433
VAV+ + + DAT + F +E + +++H N+V+L L ++++++ GSL
Sbjct: 32 VAVKCI-KNDAT--AQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLV 88
Query: 434 AALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPC 493
L S L + LK + + Y+ +VH ++ + +L+ ++
Sbjct: 89 DYLR---SRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAK 142
Query: 494 ISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFG 553
+S FGL + E T TG + + APEA + KF+ K DV+SFG
Sbjct: 143 VSDFGLTK-----------EASSTQDTGK----LPVKWTAPEA-LREKKFSTKSDVWSFG 186
Query: 554 IVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATF 612
I+L EI + GR+P P K + V K ++ P + PA+ +
Sbjct: 187 ILLWEIYSFGRVP--YPRIPLKDVVPRVEKGYKMDAP--DGCPPAV-------------Y 229
Query: 613 HIALNCTELDPEFRPRMRTVSESLDRVK 640
+ NC LD RP + E L+ +K
Sbjct: 230 EVMKNCWHLDAAMRPSFLQLREQLEHIK 257
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 125/287 (43%), Gaps = 46/287 (16%)
Query: 349 VVGKSKNGIMYK-VVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNI 407
V+G G +YK + + G + P VA++ L E + K+ E +A V +P++
Sbjct: 16 VLGSGAFGTVYKGLWIPEGEKVKIP--VAIKELREATSPKANKEILDEAYVMASVDNPHV 73
Query: 408 VRLKAFYYANDEKLLISDFIRNGSL--YAALHAGPSDSLPPLPWEARLKIAQGTARGLMY 465
RL + +L I+ + G L Y H S L W ++ A+G+ Y
Sbjct: 74 CRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNY 126
Query: 466 IHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRIS 525
+ + R+ VH ++ + +L+ H I+ FGL +LL K E G ++
Sbjct: 127 LED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE-------GGKVP 176
Query: 526 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLP-DAGPENDGKGLESLVRKA 583
++A E+ I +T + DV+S+G+ + E++T G P D P ++ + S++ K
Sbjct: 177 I---KWMALES-ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSILEKG 229
Query: 584 FRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMR 630
R +P ID + I + C +D + RP+ R
Sbjct: 230 ERLPQPPICTID---------------VYMIMVKCWMIDADSRPKFR 261
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 112/274 (40%), Gaps = 27/274 (9%)
Query: 370 GAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEK--LLISDFI 427
G +VAV+ L ++ E++ + + H +I++ K EK L+ +++
Sbjct: 41 GTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYV 100
Query: 428 RNGSLYAALHAGPSDSLP--PLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKIL 485
GSL D LP + L AQ G+ Y+H + Y+H N+ + +L
Sbjct: 101 PLGSL--------RDYLPRHSIGLAQLLLFAQQICEGMAYLH---AQHYIHRNLAARNVL 149
Query: 486 LDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQ 545
LD++ I FGL + +P + + V S + + APE + KF
Sbjct: 150 LDNDRLVKIGDFGLAKAVPEGHEYYR----VREDGDSPV-----FWYAPEC-LKEYKFYY 199
Query: 546 KCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAK 605
DV+SFG+ L E+LT P L + + R L+E+++ +
Sbjct: 200 ASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLR-LTELLERG-ERLPRPD 257
Query: 606 RQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 639
+ +H+ NC E + FRP + L V
Sbjct: 258 KCPCEVYHLMKNCWETEASFRPTFENLIPILKTV 291
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 124/295 (42%), Gaps = 44/295 (14%)
Query: 349 VVGKSKNGIMYK-VVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNI 407
V+G G ++K V + G + P + V G + F+ + AI + H +I
Sbjct: 38 VLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQS--FQAVTDHMLAIGSLDHAHI 95
Query: 408 VRLKAFYYANDEKLLISDFIRNGSL--YAALHAGPSDSLPPLPWEARLKIAQGTARGLMY 465
VRL + +L ++ ++ GSL + H G L W ++ A+G+ Y
Sbjct: 96 VRLLGLCPGSSLQL-VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI------AKGMYY 148
Query: 466 IHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRIS 525
+ E+ VH N+ + +LL ++ FG+ LLP K ++ S + I
Sbjct: 149 LEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDK-----QLLYSEAKTPIK 200
Query: 526 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAF 584
++A E+ +G K+T + DV+S+G+ + E++T G P AG + L+ K
Sbjct: 201 -----WMALESIHFG-KYTHQSDVWSYGVTVWELMTFGAEPYAGLRL--AEVPDLLEKGE 252
Query: 585 RERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 639
R +P ID + + + C +D RP + ++ R+
Sbjct: 253 RLAQPQICTID---------------VYMVMVKCWMIDENIRPTFKELANEFTRM 292
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 125/289 (43%), Gaps = 46/289 (15%)
Query: 349 VVGKSKNGIMYK-VVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNI 407
V+G G +YK + + G + P VA++ L E + K+ E +A V +P++
Sbjct: 26 VLGSGAFGTVYKGLWIPEGEKVKIP--VAIKELREATSPKANKEILDEAYVMASVDNPHV 83
Query: 408 VRLKAFYYANDEKLLISDFIRNGSL--YAALHAGPSDSLPPLPWEARLKIAQGTARGLMY 465
RL + +L I + G L Y H S L W ++ A+G+ Y
Sbjct: 84 CRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNY 136
Query: 466 IHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRIS 525
+ + R+ VH ++ + +L+ H I+ FGL +LL K E G ++
Sbjct: 137 LED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE-------GGKVP 186
Query: 526 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLP-DAGPENDGKGLESLVRKA 583
++A E+ I +T + DV+S+G+ + E++T G P D P ++ + S++ K
Sbjct: 187 I---KWMALES-ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSILEKG 239
Query: 584 FRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTV 632
R +P ID + I + C +D + RP+ R +
Sbjct: 240 ERLPQPPICTID---------------VYMIMVKCWMIDADSRPKFREL 273
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 99/217 (45%), Gaps = 30/217 (13%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
++G+ +G KV + +V+A ++ + + +D+ E++ +A HPNIV
Sbjct: 41 IIGELGDGAFGKVYKAQNK---ETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIV 97
Query: 409 R-LKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIH 467
+ L AFYY N+ +LI +F G++ A + PL + + T L Y+H
Sbjct: 98 KLLDAFYYENNLWILI-EFCAGGAVDAVMLELER----PLTESQIQVVCKQTLDALNYLH 152
Query: 468 EYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAI 527
+ K +H ++K+ IL + ++ FG++ KN T R S I
Sbjct: 153 D---NKIIHRDLKAGNILFTLDGDIKLADFGVS---------AKN----TRTIQRRDSFI 196
Query: 528 SNVY-LAPEARIYGSK----FTQKCDVYSFGIVLLEI 559
Y +APE + + + K DV+S GI L+E+
Sbjct: 197 GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 101/216 (46%), Gaps = 28/216 (12%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
++G+ +G KV + +V+A ++ + + +D+ E++ +A HPNIV
Sbjct: 41 IIGELGDGAFGKVYKAQNK---ETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIV 97
Query: 409 R-LKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIH 467
+ L AFYY N+ +LI +F G++ A + PL + + T L Y+H
Sbjct: 98 KLLDAFYYENNLWILI-EFCAGGAVDAVMLELER----PLTESQIQVVCKQTLDALNYLH 152
Query: 468 EYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAI 527
+ K +H ++K+ IL + ++ FG++ T + + ++ + GT
Sbjct: 153 D---NKIIHRDLKAGNILFTLDGDIKLADFGVSA--KNTRXIQRRDSFI--GTP------ 199
Query: 528 SNVYLAPEARIYGSK----FTQKCDVYSFGIVLLEI 559
++APE + + + K DV+S GI L+E+
Sbjct: 200 --YWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 126/289 (43%), Gaps = 46/289 (15%)
Query: 349 VVGKSKNGIMYK-VVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNI 407
V+G G +YK + + G + P VA++ L E + K+ E +A V +P++
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIP--VAIKELREATSPKANKEILDEAYVMASVDNPHV 81
Query: 408 VRLKAFYYANDEKLLISDFIRNGSL--YAALHAGPSDSLPPLPWEARLKIAQGTARGLMY 465
RL + +L++ + G L Y H S L W ++ A+G+ Y
Sbjct: 82 CRLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNY 134
Query: 466 IHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRIS 525
+ + R+ VH ++ + +L+ H I+ FGL +LL K E G ++
Sbjct: 135 LED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE-------GGKVP 184
Query: 526 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLP-DAGPENDGKGLESLVRKA 583
++A E+ I +T + DV+S+G+ + E++T G P D P ++ + S++ K
Sbjct: 185 I---KWMALES-ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSILEKG 237
Query: 584 FRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTV 632
R +P ID + I + C +D + RP+ R +
Sbjct: 238 ERLPQPPICTID---------------VYMIMVKCWMIDADSRPKFREL 271
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 125/289 (43%), Gaps = 46/289 (15%)
Query: 349 VVGKSKNGIMYK-VVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNI 407
V+G G +YK + + G + P VA++ L E + K+ E +A V +P++
Sbjct: 23 VLGSGAFGTVYKGLWIPEGEKVKIP--VAIKELREATSPKANKEILDEAYVMASVDNPHV 80
Query: 408 VRLKAFYYANDEKLLISDFIRNGSL--YAALHAGPSDSLPPLPWEARLKIAQGTARGLMY 465
RL + +L I + G L Y H S L W ++ A+G+ Y
Sbjct: 81 CRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNY 133
Query: 466 IHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRIS 525
+ + R+ VH ++ + +L+ H I+ FGL +LL K E G ++
Sbjct: 134 LED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE-------GGKVP 183
Query: 526 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLP-DAGPENDGKGLESLVRKA 583
++A E+ I +T + DV+S+G+ + E++T G P D P ++ + S++ K
Sbjct: 184 I---KWMALES-ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSILEKG 236
Query: 584 FRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTV 632
R +P ID + I + C +D + RP+ R +
Sbjct: 237 ERLPQPPICTID---------------VYMIMVKCWMIDADSRPKFREL 270
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 125/289 (43%), Gaps = 46/289 (15%)
Query: 349 VVGKSKNGIMYK-VVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNI 407
V+G G +YK + + G + P VA++ L E + K+ E +A V +P++
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIP--VAIKELREATSPKANKEILDEAYVMASVDNPHV 79
Query: 408 VRLKAFYYANDEKLLISDFIRNGSL--YAALHAGPSDSLPPLPWEARLKIAQGTARGLMY 465
RL + +L I + G L Y H S L W ++ A+G+ Y
Sbjct: 80 CRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNY 132
Query: 466 IHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRIS 525
+ + R+ VH ++ + +L+ H I+ FGL +LL K E G ++
Sbjct: 133 LED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE-------GGKVP 182
Query: 526 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLP-DAGPENDGKGLESLVRKA 583
++A E+ I +T + DV+S+G+ + E++T G P D P ++ + S++ K
Sbjct: 183 I---KWMALES-ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSILEKG 235
Query: 584 FRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTV 632
R +P ID + I + C +D + RP+ R +
Sbjct: 236 ERLPQPPICTID---------------VYMIMVKCWMIDADSRPKFREL 269
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 124/287 (43%), Gaps = 46/287 (16%)
Query: 349 VVGKSKNGIMYK-VVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNI 407
V+G G +YK + + G + P VA++ L E + K+ E +A V +P++
Sbjct: 19 VLGSGAFGTVYKGLWIPEGEKVKIP--VAIKELREATSPKANKEILDEAYVMASVDNPHV 76
Query: 408 VRLKAFYYANDEKLLISDFIRNGSL--YAALHAGPSDSLPPLPWEARLKIAQGTARGLMY 465
RL + +L I+ + G L Y H S L W ++ A G+ Y
Sbjct: 77 CRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AEGMNY 129
Query: 466 IHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRIS 525
+ + R+ VH ++ + +L+ H I+ FGL +LL K E G ++
Sbjct: 130 LED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE-------GGKVP 179
Query: 526 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLP-DAGPENDGKGLESLVRKA 583
++A E+ I +T + DV+S+G+ + E++T G P D P ++ + S++ K
Sbjct: 180 I---KWMALES-ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSILEKG 232
Query: 584 FRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMR 630
R +P ID + I + C +D + RP+ R
Sbjct: 233 ERLPQPPICTID---------------VYMIMVKCWMIDADSRPKFR 264
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 125/289 (43%), Gaps = 46/289 (15%)
Query: 349 VVGKSKNGIMYK-VVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNI 407
V+G G +YK + + G + P VA++ L E + K+ E +A V +P++
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKVKIP--VAIKELREATSPKANKEILDEAYVMASVDNPHV 82
Query: 408 VRLKAFYYANDEKLLISDFIRNGSL--YAALHAGPSDSLPPLPWEARLKIAQGTARGLMY 465
RL + +L I + G L Y H S L W ++ A+G+ Y
Sbjct: 83 CRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNY 135
Query: 466 IHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRIS 525
+ + R+ VH ++ + +L+ H I+ FGL +LL K E G ++
Sbjct: 136 LED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE-------GGKVP 185
Query: 526 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLP-DAGPENDGKGLESLVRKA 583
++A E+ I +T + DV+S+G+ + E++T G P D P ++ + S++ K
Sbjct: 186 I---KWMALES-ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSILEKG 238
Query: 584 FRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTV 632
R +P ID + I + C +D + RP+ R +
Sbjct: 239 ERLPQPPICTID---------------VYMIMVKCWMIDADSRPKFREL 272
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 119/263 (45%), Gaps = 31/263 (11%)
Query: 316 LVTDEEEGQKGKFFIIDEGFSLELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTVV 375
L DE++ ++ + F+ + EL+D +G G+++KV + SG+ V
Sbjct: 7 LELDEQQRKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVS-HKPSGL-----V 60
Query: 376 AVRRLTEGDATWRFKD-FESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
R+L + ++ E++ + P IV +Y++ E + + + GSL
Sbjct: 61 MARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQ 120
Query: 435 ALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCI 494
L +P + K++ +GL Y+ E K +H ++K + IL++ +
Sbjct: 121 VLKKAGR-----IPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKL 173
Query: 495 SGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGI 554
FG++ L +++ S G+R Y++PE R+ G+ ++ + D++S G+
Sbjct: 174 CDFGVSGQLI--------DSMANSFVGTR------SYMSPE-RLQGTHYSVQSDIWSMGL 218
Query: 555 VLLEILTGRLPDAGPENDGKGLE 577
L+E+ GR P P D K LE
Sbjct: 219 SLVEMAVGRYPIPPP--DAKELE 239
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 125/289 (43%), Gaps = 46/289 (15%)
Query: 349 VVGKSKNGIMYK-VVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNI 407
V+G G +YK + + G + P VA++ L E + K+ E +A V +P++
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKVKIP--VAIKELREATSPKANKEILDEAYVMASVDNPHV 82
Query: 408 VRLKAFYYANDEKLLISDFIRNGSL--YAALHAGPSDSLPPLPWEARLKIAQGTARGLMY 465
RL + +L I+ + G L Y H S L W ++ A+G+ Y
Sbjct: 83 CRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNY 135
Query: 466 IHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRIS 525
+ + R+ VH ++ + +L+ H I+ FGL +LL K E G ++
Sbjct: 136 LED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE-------GGKVP 185
Query: 526 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLP-DAGPENDGKGLESLVRKA 583
++A E+ I +T + DV+S+G+ + E++T G P D P ++ + S++ K
Sbjct: 186 I---KWMALES-ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSILEKG 238
Query: 584 FRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTV 632
R +P ID + I C +D + RP+ R +
Sbjct: 239 ERLPQPPICTID---------------VYMIMRKCWMIDADSRPKFREL 272
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 125/289 (43%), Gaps = 46/289 (15%)
Query: 349 VVGKSKNGIMYK-VVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNI 407
V+G G +YK + + G + P VA++ L E + K+ E +A V +P++
Sbjct: 32 VLGSGAFGTVYKGLWIPEGEKVKIP--VAIKELREATSPKANKEILDEAYVMASVDNPHV 89
Query: 408 VRLKAFYYANDEKLLISDFIRNGSL--YAALHAGPSDSLPPLPWEARLKIAQGTARGLMY 465
RL + +L I+ + G L Y H S L W ++ A+G+ Y
Sbjct: 90 CRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNY 142
Query: 466 IHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRIS 525
+ + R+ VH ++ + +L+ H I+ FGL +LL K E G ++
Sbjct: 143 LED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE-------GGKVP 192
Query: 526 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLP-DAGPENDGKGLESLVRKA 583
++A E+ I +T + DV+S+G+ + E++T G P D P ++ + S++ K
Sbjct: 193 I---KWMALES-ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSILEKG 245
Query: 584 FRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTV 632
R +P ID + I C +D + RP+ R +
Sbjct: 246 ERLPQPPICTID---------------VYMIMRKCWMIDADSRPKFREL 279
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 124/295 (42%), Gaps = 44/295 (14%)
Query: 349 VVGKSKNGIMYK-VVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNI 407
V+G G ++K V + G + P + V G + F+ + AI + H +I
Sbjct: 20 VLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQS--FQAVTDHMLAIGSLDHAHI 77
Query: 408 VRLKAFYYANDEKLLISDFIRNGSL--YAALHAGPSDSLPPLPWEARLKIAQGTARGLMY 465
VRL + +L ++ ++ GSL + H G L W ++ A+G+ Y
Sbjct: 78 VRLLGLCPGSSLQL-VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI------AKGMYY 130
Query: 466 IHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRIS 525
+ E+ VH N+ + +LL ++ FG+ LLP K ++ S + I
Sbjct: 131 LEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDK-----QLLYSEAKTPIK 182
Query: 526 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAF 584
++A E+ I+ K+T + DV+S+G+ + E++T G P AG + L+ K
Sbjct: 183 -----WMALES-IHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRL--AEVPDLLEKGE 234
Query: 585 RERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 639
R +P ID + + + C +D RP + ++ R+
Sbjct: 235 RLAQPQICTID---------------VYMVMVKCWMIDENIRPTFKELANEFTRM 274
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 108/236 (45%), Gaps = 46/236 (19%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG-----DATWRFKDFESEVEAIARVQH 404
+GK GI++K + R +G VVAV+++ + DA F++ E H
Sbjct: 17 LGKGAYGIVWKSI-DRRTG----EVVAVKKIFDAFQNSTDAQRTFREIMILTELSG---H 68
Query: 405 PNIVRLKAFYYANDEK--LLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARG 462
NIV L A++++ L+ D++ L+A + A + L P+ + + +
Sbjct: 69 ENIVNLLNVLRADNDRDVYLVFDYMET-DLHAVIRA---NILEPV---HKQYVVYQLIKV 121
Query: 463 LMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKN---------- 512
+ Y+H +H ++K + ILL+ E H ++ FGL+R +VT N
Sbjct: 122 IKYLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTE 178
Query: 513 -----ETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
+ I+T +R Y APE + +K+T+ D++S G +L EIL G+
Sbjct: 179 NFDDDQPILTDYVATRW------YRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 125/289 (43%), Gaps = 46/289 (15%)
Query: 349 VVGKSKNGIMYK-VVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNI 407
V+G G +YK + + G + P VA++ L E + K+ E +A V +P++
Sbjct: 23 VLGSGAFGTVYKGLWIPEGEKVKIP--VAIKELREATSPKANKEILDEAYVMASVDNPHV 80
Query: 408 VRLKAFYYANDEKLLISDFIRNGSL--YAALHAGPSDSLPPLPWEARLKIAQGTARGLMY 465
RL + +L I + G L Y H S L W ++ A+G+ Y
Sbjct: 81 CRLLGICLTSTVQL-IMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQI------AKGMNY 133
Query: 466 IHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRIS 525
+ + R+ VH ++ + +L+ H I+ FGL +LL K E G ++
Sbjct: 134 LED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE-------GGKVP 183
Query: 526 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLP-DAGPENDGKGLESLVRKA 583
++A E+ I +T + DV+S+G+ + E++T G P D P ++ + S++ K
Sbjct: 184 I---KWMALES-ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSILEKG 236
Query: 584 FRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTV 632
R +P ID + I + C +D + RP+ R +
Sbjct: 237 ERLPQPPICTID---------------VYMIMVKCWMIDADSRPKFREL 270
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 124/287 (43%), Gaps = 46/287 (16%)
Query: 349 VVGKSKNGIMYK-VVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNI 407
V+G G +YK + + G + P VA+ L E + K+ E +A V +P++
Sbjct: 56 VLGSGAFGTVYKGLWIPEGEKVKIP--VAIMELREATSPKANKEILDEAYVMASVDNPHV 113
Query: 408 VRLKAFYYANDEKLLISDFIRNGSL--YAALHAGPSDSLPPLPWEARLKIAQGTARGLMY 465
RL + +L I+ + G L Y H S L W ++ A+G+ Y
Sbjct: 114 CRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNY 166
Query: 466 IHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRIS 525
+ + R+ VH ++ + +L+ H I+ FGL +LL K E G ++
Sbjct: 167 LED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE-------GGKVP 216
Query: 526 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLP-DAGPENDGKGLESLVRKA 583
++A E+ I +T + DV+S+G+ + E++T G P D P ++ + S++ K
Sbjct: 217 I---KWMALES-ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSILEKG 269
Query: 584 FRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMR 630
R +P ID + I + C +D + RP+ R
Sbjct: 270 ERLPQPPICTID---------------VYMIMVKCWMIDADSRPKFR 301
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 99/234 (42%), Gaps = 39/234 (16%)
Query: 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTV-----------VAVRRL----TEGDATWRFKD 391
++++GK N YK+V G G G TV VA++ + E + T K
Sbjct: 2 SHMIGKIINE-RYKIVDKLGGG-GMSTVYLAEDTILNIKVAIKAIFIPPREKEET--LKR 57
Query: 392 FESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEA 451
FE EV +++ H NIV + +D L+ ++I +L + +S PL +
Sbjct: 58 FEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYI-----ESHGPLSVDT 112
Query: 452 RLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTK 511
+ G+ + H+ + VH +IK IL+D I FG+ + L TS
Sbjct: 113 AINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQT 169
Query: 512 NETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
N + T Y +PE + G + D+YS GIVL E+L G P
Sbjct: 170 NHVLGTVQ-----------YFSPE-QAKGEATDECTDIYSIGIVLYEMLVGEPP 211
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 100/216 (46%), Gaps = 28/216 (12%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
++G+ +G KV + +V+A ++ + + +D+ E++ +A HPNIV
Sbjct: 41 IIGELGDGAFGKVYKAQNK---ETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIV 97
Query: 409 R-LKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIH 467
+ L AFYY N+ +LI +F G++ A + PL + + T L Y+H
Sbjct: 98 KLLDAFYYENNLWILI-EFCAGGAVDAVMLELER----PLTESQIQVVCKQTLDALNYLH 152
Query: 468 EYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAI 527
+ K +H ++K+ IL + ++ FG++ T + + + + GT
Sbjct: 153 D---NKIIHRDLKAGNILFTLDGDIKLADFGVSA--KNTRXIQRRDXFI--GTP------ 199
Query: 528 SNVYLAPEARIYGSK----FTQKCDVYSFGIVLLEI 559
++APE + + + K DV+S GI L+E+
Sbjct: 200 --YWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 117/268 (43%), Gaps = 44/268 (16%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKL-LISDFIRNGSLY 433
VAV+ + + DAT + F +E + +++H N+V+L L ++++++ GSL
Sbjct: 38 VAVKCI-KNDAT--AQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLV 94
Query: 434 AALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPC 493
L S L + LK + + Y+ +VH ++ + +L+ ++
Sbjct: 95 DYLR---SRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAK 148
Query: 494 ISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFG 553
+S FGL + E T TG + + APEA + + F+ K DV+SFG
Sbjct: 149 VSDFGLTK-----------EASSTQDTGK----LPVKWTAPEA-LREAAFSTKSDVWSFG 192
Query: 554 IVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATF 612
I+L EI + GR+P P K + V K ++ P + PA+ +
Sbjct: 193 ILLWEIYSFGRVPY--PRIPLKDVVPRVEKGYKMDAP--DGCPPAV-------------Y 235
Query: 613 HIALNCTELDPEFRPRMRTVSESLDRVK 640
+ NC LD RP + E L+ +K
Sbjct: 236 EVMKNCWHLDAAMRPSFLQLREQLEHIK 263
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 124/287 (43%), Gaps = 46/287 (16%)
Query: 349 VVGKSKNGIMYK-VVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNI 407
V+G G +YK + + G + P VA++ L E + K+ E +A V +P++
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIP--VAIKELREATSPKANKEILDEAYVMASVDNPHV 79
Query: 408 VRLKAFYYANDEKLLISDFIRNGSL--YAALHAGPSDSLPPLPWEARLKIAQGTARGLMY 465
RL + +L I+ + G L Y H S L W ++ A+G+ Y
Sbjct: 80 CRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNY 132
Query: 466 IHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRIS 525
+ + R+ VH ++ + +L+ H I+ FGL +LL K E G ++
Sbjct: 133 LED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE-------GGKVP 182
Query: 526 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLP-DAGPENDGKGLESLVRKA 583
++A E+ I +T + DV+S+G+ + E++T G P D P ++ + S++ K
Sbjct: 183 I---KWMALES-ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSILEKG 235
Query: 584 FRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMR 630
R +P ID + I C +D + RP+ R
Sbjct: 236 ERLPQPPICTID---------------VYMIMRKCWMIDADSRPKFR 267
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 105/235 (44%), Gaps = 37/235 (15%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNI 407
V+G+ G +V+ R G A++R+ E + +DF E+E + ++ HPNI
Sbjct: 32 VIGEGNFG---QVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 88
Query: 408 VRLK-----------AFYYANDEKLLISDFIRNGSLYAA--LHAGPSDSLPPLPWEARLK 454
+ L A YA LL DF+R + A + + L + L
Sbjct: 89 INLLGACEHRGYLYLAIEYAPHGNLL--DFLRKSRVLETDPAFAIANSTASTLSSQQLLH 146
Query: 455 IAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNET 514
A ARG+ Y+ S ++++H ++ + IL+ + I+ FGL+R +
Sbjct: 147 FAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR----------GQE 193
Query: 515 IVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAG 568
+ T R+ ++A E+ Y S +T DV+S+G++L EI++ G P G
Sbjct: 194 VYVKKTMGRLPV---RWMAIESLNY-SVYTTNSDVWSYGVLLWEIVSLGGTPYCG 244
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 128/304 (42%), Gaps = 53/304 (17%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPT-VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
+G+ + G +YK + G G T VA++ L + ++F E AR+QHPN+V
Sbjct: 34 LGEDRFGKVYKGHLF-GPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVV 92
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAAL-------HAGPSD-------SLPPLPWEARLK 454
L + +I + +G L+ L G +D +L P + +
Sbjct: 93 CLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDF---VH 149
Query: 455 IAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNET 514
+ A G+ Y+ S VH ++ + +L+ D+L+ IS GL R +V +
Sbjct: 150 LVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFR------EVYAADY 200
Query: 515 IVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDG 573
G S + ++APEA +YG KF+ D++S+G+VL E+ + G P G N
Sbjct: 201 YKLLGN----SLLPIRWMAPEAIMYG-KFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQD 255
Query: 574 KGLESLVRKAFRERRPLSEVID-PALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTV 632
V + R R+ L D PA V + + + C P RPR + +
Sbjct: 256 ------VVEMIRNRQVLPCPDDCPAWV------------YALMIECWNEFPSRRPRFKDI 297
Query: 633 SESL 636
L
Sbjct: 298 HSRL 301
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 105/235 (44%), Gaps = 37/235 (15%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNI 407
V+G+ G +V+ R G A++R+ E + +DF E+E + ++ HPNI
Sbjct: 22 VIGEGNFG---QVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 78
Query: 408 VRLK-----------AFYYANDEKLLISDFIRNGSLYAA--LHAGPSDSLPPLPWEARLK 454
+ L A YA LL DF+R + A + + L + L
Sbjct: 79 INLLGACEHRGYLYLAIEYAPHGNLL--DFLRKSRVLETDPAFAIANSTASTLSSQQLLH 136
Query: 455 IAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNET 514
A ARG+ Y+ S ++++H ++ + IL+ + I+ FGL+R +
Sbjct: 137 FAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR----------GQE 183
Query: 515 IVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAG 568
+ T R+ ++A E+ Y S +T DV+S+G++L EI++ G P G
Sbjct: 184 VYVKKTMGRLPV---RWMAIESLNY-SVYTTNSDVWSYGVLLWEIVSLGGTPYCG 234
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 128/304 (42%), Gaps = 53/304 (17%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPT-VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
+G+ + G +YK + G G T VA++ L + ++F E AR+QHPN+V
Sbjct: 17 LGEDRFGKVYKGHLF-GPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVV 75
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAAL-------HAGPSD-------SLPPLPWEARLK 454
L + +I + +G L+ L G +D +L P + +
Sbjct: 76 CLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDF---VH 132
Query: 455 IAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNET 514
+ A G+ Y+ S VH ++ + +L+ D+L+ IS GL R +V +
Sbjct: 133 LVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFR------EVYAADY 183
Query: 515 IVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDG 573
G S + ++APEA +YG KF+ D++S+G+VL E+ + G P G N
Sbjct: 184 YKLLGN----SLLPIRWMAPEAIMYG-KFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQD 238
Query: 574 KGLESLVRKAFRERRPLSEVID-PALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTV 632
V + R R+ L D PA V + + + C P RPR + +
Sbjct: 239 ------VVEMIRNRQVLPCPDDCPAWV------------YALMIECWNEFPSRRPRFKDI 280
Query: 633 SESL 636
L
Sbjct: 281 HSRL 284
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/282 (21%), Positives = 122/282 (43%), Gaps = 42/282 (14%)
Query: 363 VGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYA--NDEK 420
+ +G G VV V ++ + +T + +DF E + HPN++ + +
Sbjct: 26 LWKGRWQGNDIVVKVLKVRDW-STRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHP 84
Query: 421 LLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIK 480
LI+ ++ GSLY LH G + + +K A ARG+ ++H P H +
Sbjct: 85 TLITHWMPYGSLYNVLHEGTNFVVDQ---SQAVKFALDMARGMAFLHTLEPLIPRHA-LN 140
Query: 481 STKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYG 540
S +++D+++ T++++ + + + R+ A + ++APEA
Sbjct: 141 SRSVMIDEDM---------------TARISMADVKFSFQSPGRMYAPA--WVAPEALQKK 183
Query: 541 SKFTQK--CDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPAL 598
+ T + D++SF ++L E++T +P A D +E ++ A RP I P +
Sbjct: 184 PEDTNRRSADMWSFAVLLWELVTREVPFA----DLSNMEIGMKVALEGLRP---TIPPGI 236
Query: 599 VKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 640
+ ++ C DP RP+ + L++++
Sbjct: 237 SPHVSKLMKI---------CMNEDPAKRPKFDMIVPILEKMQ 269
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 127/314 (40%), Gaps = 50/314 (15%)
Query: 338 ELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMG---APTVVAVRRLTEGDATWRFKDFES 394
+L+++ R + ++ +G +V G+ SGM +P VAV+ L E + DF
Sbjct: 38 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 97
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAAL-HAGPSDSLP-PLPWEAR 452
E I+++ H NIVR + + ++ + + G L + L P S P L
Sbjct: 98 EALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 157
Query: 453 LKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPC--------ISGFGLNRLLP 504
L +A+ A G Y+ E ++H +I + LL C I FG+ R +
Sbjct: 158 LHVARDIACGCQYLEE---NHFIHRDIAARNCLLT-----CPGPGRVAKIGDFGMARDIY 209
Query: 505 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GR 563
S K G + + ++ PEA + G FT K D +SFG++L EI + G
Sbjct: 210 RASYYRKG--------GCAMLPVK--WMPPEAFMEGI-FTSKTDTWSFGVLLWEIFSLGY 258
Query: 564 LPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDP 623
+P P + + V R +DP K + I C + P
Sbjct: 259 MPY--PSKSNQEVLEFVTSGGR--------MDP-------PKNCPGPVYRIMTQCWQHQP 301
Query: 624 EFRPRMRTVSESLD 637
E RP + E ++
Sbjct: 302 EDRPNFAIILERIE 315
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 125/289 (43%), Gaps = 46/289 (15%)
Query: 349 VVGKSKNGIMYK-VVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNI 407
V+ G +YK + + G + P VA++ L E + K+ E +A V +P++
Sbjct: 22 VLSSGAFGTVYKGLWIPEGEKVKIP--VAIKELREATSPKANKEILDEAYVMASVDNPHV 79
Query: 408 VRLKAFYYANDEKLLISDFIRNGSL--YAALHAGPSDSLPPLPWEARLKIAQGTARGLMY 465
RL + +L I+ + G L Y H S L W ++ A+G+ Y
Sbjct: 80 CRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNY 132
Query: 466 IHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRIS 525
+ + R+ VH ++ + +L+ H I+ FGL +LL K E G ++
Sbjct: 133 LED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE-------GGKVP 182
Query: 526 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLP-DAGPENDGKGLESLVRKA 583
++A E+ I +T + DV+S+G+ + E++T G P D P ++ + S++ K
Sbjct: 183 I---KWMALES-ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSILEKG 235
Query: 584 FRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTV 632
R +P ID + I + C +D + RP+ R +
Sbjct: 236 ERLPQPPICTID---------------VYMIMVKCWMIDADSRPKFREL 269
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 125/289 (43%), Gaps = 46/289 (15%)
Query: 349 VVGKSKNGIMYK-VVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNI 407
V+ G +YK + + G + P VA++ L E + K+ E +A V +P++
Sbjct: 29 VLSSGAFGTVYKGLWIPEGEKVKIP--VAIKELREATSPKANKEILDEAYVMASVDNPHV 86
Query: 408 VRLKAFYYANDEKLLISDFIRNGSL--YAALHAGPSDSLPPLPWEARLKIAQGTARGLMY 465
RL + +L I+ + G L Y H S L W ++ A+G+ Y
Sbjct: 87 CRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNY 139
Query: 466 IHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRIS 525
+ + R+ VH ++ + +L+ H I+ FGL +LL K E G ++
Sbjct: 140 LED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE-------GGKVP 189
Query: 526 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLP-DAGPENDGKGLESLVRKA 583
++A E+ I +T + DV+S+G+ + E++T G P D P ++ + S++ K
Sbjct: 190 I---KWMALES-ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSILEKG 242
Query: 584 FRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTV 632
R +P ID + I + C +D + RP+ R +
Sbjct: 243 ERLPQPPICTID---------------VYMIMVKCWMIDADSRPKFREL 276
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 96/226 (42%), Gaps = 30/226 (13%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLT-EGDATWRFKDFESEVEAIARVQHPNI 407
V+GK +M V + R G V VRR+ E + + E+ HPNI
Sbjct: 16 VIGKGFEDLM-TVNLARYKPTGE--YVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNI 72
Query: 408 VRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIH 467
V +A + A++E +++ F+ GS + D + L A I QG + L YIH
Sbjct: 73 VPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNEL---AIAYILQGVLKALDYIH 129
Query: 468 EYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRI--- 524
YVH ++K++ IL+ + +SG + N ++++ G R+
Sbjct: 130 HMG---YVHRSVKASHILISVDGKVYLSG------------LRSNLSMISHGQRQRVVHD 174
Query: 525 ----SAISNVYLAPEARIYGSK-FTQKCDVYSFGIVLLEILTGRLP 565
S +L+PE + + K D+YS GI E+ G +P
Sbjct: 175 FPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVP 220
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 126/314 (40%), Gaps = 50/314 (15%)
Query: 338 ELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMG---APTVVAVRRLTEGDATWRFKDFES 394
+L+++ R + ++ +G +V G+ SGM +P VAV+ L E + DF
Sbjct: 38 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 97
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAAL-HAGPSDSLP-PLPWEAR 452
E I++ H NIVR + + ++ + + G L + L P S P L
Sbjct: 98 EALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDL 157
Query: 453 LKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPC--------ISGFGLNRLLP 504
L +A+ A G Y+ E ++H +I + LL C I FG+ R +
Sbjct: 158 LHVARDIACGCQYLEE---NHFIHRDIAARNCLLT-----CPGPGRVAKIGDFGMARDIY 209
Query: 505 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GR 563
S K G + + ++ PEA + G FT K D +SFG++L EI + G
Sbjct: 210 RASYYRKG--------GCAMLPVK--WMPPEAFMEGI-FTSKTDTWSFGVLLWEIFSLGY 258
Query: 564 LPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDP 623
+P P + + V R +DP K + I C + P
Sbjct: 259 MPY--PSKSNQEVLEFVTSGGR--------MDP-------PKNCPGPVYRIMTQCWQHQP 301
Query: 624 EFRPRMRTVSESLD 637
E RP + E ++
Sbjct: 302 EDRPNFAIILERIE 315
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 96/226 (42%), Gaps = 30/226 (13%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLT-EGDATWRFKDFESEVEAIARVQHPNI 407
V+GK +M V + R G V VRR+ E + + E+ HPNI
Sbjct: 32 VIGKGFEDLM-TVNLARYKPTGE--YVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNI 88
Query: 408 VRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIH 467
V +A + A++E +++ F+ GS + D + L A I QG + L YIH
Sbjct: 89 VPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNEL---AIAYILQGVLKALDYIH 145
Query: 468 EYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRI--- 524
YVH ++K++ IL+ + +SG + N ++++ G R+
Sbjct: 146 HMG---YVHRSVKASHILISVDGKVYLSG------------LRSNLSMISHGQRQRVVHD 190
Query: 525 ----SAISNVYLAPEARIYGSK-FTQKCDVYSFGIVLLEILTGRLP 565
S +L+PE + + K D+YS GI E+ G +P
Sbjct: 191 FPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVP 236
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 125/289 (43%), Gaps = 46/289 (15%)
Query: 349 VVGKSKNGIMYK-VVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNI 407
V+G G +YK + + G + P VA++ L E + K+ E +A V +P++
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIP--VAIKELREATSPKANKEILDEAYVMASVDNPHV 79
Query: 408 VRLKAFYYANDEKLLISDFIRNGSL--YAALHAGPSDSLPPLPWEARLKIAQGTARGLMY 465
RL + +L I+ + G L Y H S L W ++ A+G+ Y
Sbjct: 80 CRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNY 132
Query: 466 IHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRIS 525
+ + R+ VH ++ + +L+ H I+ FG +LL K E G ++
Sbjct: 133 LED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE-------GGKVP 182
Query: 526 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLP-DAGPENDGKGLESLVRKA 583
++A E+ I +T + DV+S+G+ + E++T G P D P ++ + S++ K
Sbjct: 183 I---KWMALES-ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSILEKG 235
Query: 584 FRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTV 632
R +P ID + I + C +D + RP+ R +
Sbjct: 236 ERLPQPPICTID---------------VYMIMVKCWMIDADSRPKFREL 269
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 30/209 (14%)
Query: 356 GIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR-LKAFY 414
G +YK S + A V+ + E +D+ E++ +A HPNIV+ L AFY
Sbjct: 24 GKVYKAQNKETSVLAAAKVIDTKSEEE------LEDYMVEIDILASCDHPNIVKLLDAFY 77
Query: 415 YANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKY 474
Y N+ +LI +F G++ A + PL + + T L Y+H+ K
Sbjct: 78 YENNLWILI-EFCAGGAVDAVMLELER----PLTESQIQVVCKQTLDALNYLHD---NKI 129
Query: 475 VHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAP 534
+H ++K+ IL + ++ FG++ KN S I + ++AP
Sbjct: 130 IHRDLKAGNILFTLDGDIKLADFGVS---------AKNTRTXIQRRDSFIG--TPYWMAP 178
Query: 535 EARIYGSK----FTQKCDVYSFGIVLLEI 559
E + + + K DV+S GI L+E+
Sbjct: 179 EVVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 85/203 (41%), Gaps = 32/203 (15%)
Query: 364 GRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLI 423
GR M V RL + + T E ++ V HP I+R+ + + +I
Sbjct: 31 GRYYAMKVLKKEIVVRLKQVEHT------NDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84
Query: 424 SDFIRNGSLYAALHAGPSDSLP-PLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKST 482
D+I G L++ L S P P+ A+ A+ L Y+H + ++ ++K
Sbjct: 85 MDYIEGGELFSLLRK--SQRFPNPV---AKFYAAE-VCLALEYLHS---KDIIYRDLKPE 135
Query: 483 KILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSK 542
ILLD H I+ FG + +P T GT Y+APE +
Sbjct: 136 NILLDKNGHIKITDFGFAKYVPDV-------TYXLCGTPD--------YIAPEV-VSTKP 179
Query: 543 FTQKCDVYSFGIVLLEILTGRLP 565
+ + D +SFGI++ E+L G P
Sbjct: 180 YNKSIDWWSFGILIYEMLAGYTP 202
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 126/314 (40%), Gaps = 50/314 (15%)
Query: 338 ELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMG---APTVVAVRRLTEGDATWRFKDFES 394
+L+++ R + ++ +G +V G+ SGM +P VAV+ L E + DF
Sbjct: 23 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 82
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAAL-HAGPSDSLP-PLPWEAR 452
E I++ H NIVR + + ++ + + G L + L P S P L
Sbjct: 83 EALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDL 142
Query: 453 LKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPC--------ISGFGLNRLLP 504
L +A+ A G Y+ E ++H +I + LL C I FG+ R +
Sbjct: 143 LHVARDIACGCQYLEE---NHFIHRDIAARNCLLT-----CPGPGRVAKIGDFGMARDIY 194
Query: 505 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GR 563
S K G + + ++ PEA + G FT K D +SFG++L EI + G
Sbjct: 195 RASYYRKG--------GCAMLPVK--WMPPEAFMEGI-FTSKTDTWSFGVLLWEIFSLGY 243
Query: 564 LPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDP 623
+P P + + V R +DP K + I C + P
Sbjct: 244 MP--YPSKSNQEVLEFVTSGGR--------MDP-------PKNCPGPVYRIMTQCWQHQP 286
Query: 624 EFRPRMRTVSESLD 637
E RP + E ++
Sbjct: 287 EDRPNFAIILERIE 300
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 126/314 (40%), Gaps = 50/314 (15%)
Query: 338 ELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMG---APTVVAVRRLTEGDATWRFKDFES 394
+L+++ R + ++ +G +V G+ SGM +P VAV+ L E + DF
Sbjct: 24 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 83
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAAL-HAGPSDSLP-PLPWEAR 452
E I+++ H NIVR + + ++ + + G L + L P S P L
Sbjct: 84 EALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 143
Query: 453 LKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPC--------ISGFGLNRLLP 504
L +A+ A G Y+ E ++H +I + LL C I FG+ R +
Sbjct: 144 LHVARDIACGCQYLEE---NHFIHRDIAARNCLLT-----CPGPGRVAKIGDFGMARDIY 195
Query: 505 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GR 563
S K + + ++ PEA + G FT K D +SFG++L EI + G
Sbjct: 196 RASYYRKGGC----------AMLPVKWMPPEAFMEGI-FTSKTDTWSFGVLLWEIFSLGY 244
Query: 564 LPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDP 623
+P P + + V R +DP K + I C + P
Sbjct: 245 MP--YPSKSNQEVLEFVTSGGR--------MDP-------PKNCPGPVYRIMTQCWQHQP 287
Query: 624 EFRPRMRTVSESLD 637
E RP + E ++
Sbjct: 288 EDRPNFAIILERIE 301
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 84/195 (43%), Gaps = 31/195 (15%)
Query: 393 ESEVEAIARVQHPNIVRL----KAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLP 448
E EV ++ ++H NI++ K + + LI+ F GSL L A +
Sbjct: 66 EYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANV------VS 119
Query: 449 WEARLKIAQGTARGLMYIHEYSPR-------KYVHGNIKSTKILLDDELHPCISGFGLNR 501
W IA+ ARGL Y+HE P H +IKS +LL + L CI+ FGL
Sbjct: 120 WNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLA- 178
Query: 502 LLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQ----KCDVYSFGIVLL 557
L + + +T GT Y+APE F + + D+Y+ G+VL
Sbjct: 179 -LKFEAGKSAGDTHGQVGT--------RRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLW 229
Query: 558 EILTGRLPDAGPEND 572
E+ + GP ++
Sbjct: 230 ELASRCTAADGPVDE 244
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 117/268 (43%), Gaps = 44/268 (16%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKL-LISDFIRNGSLY 433
VAV+ + + DAT + F +E + +++H N+V+L L ++++++ GSL
Sbjct: 219 VAVKCI-KNDAT--AQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLV 275
Query: 434 AALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPC 493
L S L + LK + + Y+ +VH ++ + +L+ ++
Sbjct: 276 DYLR---SRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAK 329
Query: 494 ISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFG 553
+S FGL + E T TG + + APEA + KF+ K DV+SFG
Sbjct: 330 VSDFGLTK-----------EASSTQDTGK----LPVKWTAPEA-LREKKFSTKSDVWSFG 373
Query: 554 IVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATF 612
I+L EI + GR+P P K + V K ++ P + PA+ +
Sbjct: 374 ILLWEIYSFGRVP--YPRIPLKDVVPRVEKGYKMDAP--DGCPPAV-------------Y 416
Query: 613 HIALNCTELDPEFRPRMRTVSESLDRVK 640
+ NC LD RP + E L+ ++
Sbjct: 417 DVMKNCWHLDAATRPTFLQLREQLEHIR 444
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 87/192 (45%), Gaps = 22/192 (11%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
VA++ + EG + +DF E E + ++ HP +V+L L+++F+ +G L
Sbjct: 35 VAIKTIREGAMS--EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSD 92
Query: 435 ALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCI 494
L E L + G+ Y+ E +H ++ + L+ + +
Sbjct: 93 YLRTQRG----LFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKV 145
Query: 495 SGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGI 554
S FG+ R + TS TG++ + +PE + S+++ K DV+SFG+
Sbjct: 146 SDFGMTRFVLDDQ--------YTSSTGTKFPV---KWASPEVFSF-SRYSSKSDVWSFGV 193
Query: 555 VLLEILT-GRLP 565
++ E+ + G++P
Sbjct: 194 LMWEVFSEGKIP 205
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 126/314 (40%), Gaps = 50/314 (15%)
Query: 338 ELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMG---APTVVAVRRLTEGDATWRFKDFES 394
+L+++ R + ++ +G +V G+ SGM +P VAV+ L E + DF
Sbjct: 23 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 82
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAAL-HAGPSDSLP-PLPWEAR 452
E I++ H NIVR + + ++ + + G L + L P S P L
Sbjct: 83 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 142
Query: 453 LKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPC--------ISGFGLNRLLP 504
L +A+ A G Y+ E ++H +I + LL C I FG+ R +
Sbjct: 143 LHVARDIACGCQYLEE---NHFIHRDIAARNCLLT-----CPGPGRVAKIGDFGMARDIY 194
Query: 505 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GR 563
S K G + + ++ PEA + G FT K D +SFG++L EI + G
Sbjct: 195 RASYYRKG--------GCAMLPVK--WMPPEAFMEGI-FTSKTDTWSFGVLLWEIFSLGY 243
Query: 564 LPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDP 623
+P P + + V R +DP K + I C + P
Sbjct: 244 MP--YPSKSNQEVLEFVTSGGR--------MDP-------PKNCPGPVYRIMTQCWQHQP 286
Query: 624 EFRPRMRTVSESLD 637
E RP + E ++
Sbjct: 287 EDRPNFAIILERIE 300
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 125/289 (43%), Gaps = 46/289 (15%)
Query: 349 VVGKSKNGIMYK-VVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNI 407
V+G G +YK + + G + P VA++ L E + K+ E +A V +P++
Sbjct: 29 VLGSGAFGTVYKGLWIPEGEKVKIP--VAIKELREATSPKANKEILDEAYVMASVDNPHV 86
Query: 408 VRLKAFYYANDEKLLISDFIRNGSL--YAALHAGPSDSLPPLPWEARLKIAQGTARGLMY 465
RL + +L I+ + G L Y H S L W ++ A+G+ Y
Sbjct: 87 CRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNY 139
Query: 466 IHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRIS 525
+ + R+ VH ++ + +L+ H I+ FG +LL K E G ++
Sbjct: 140 LED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE-------GGKVP 189
Query: 526 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLP-DAGPENDGKGLESLVRKA 583
++A E+ I +T + DV+S+G+ + E++T G P D P ++ + S++ K
Sbjct: 190 I---KWMALES-ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSILEKG 242
Query: 584 FRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTV 632
R +P ID + I + C +D + RP+ R +
Sbjct: 243 ERLPQPPICTID---------------VYMIMVKCWMIDADSRPKFREL 276
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 110/250 (44%), Gaps = 34/250 (13%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
VA++ + EG + +F E + + + H +V+L +I++++ NG L
Sbjct: 51 VAIKMIKEGSMS--EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN 108
Query: 435 AL----HAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDEL 490
L H + L L++ + + Y+ ++++H ++ + L++D+
Sbjct: 109 YLREMRHRFQTQQL--------LEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQG 157
Query: 491 HPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVY 550
+S FGL+R V +E TS GS+ + PE +Y SKF+ K D++
Sbjct: 158 VVKVSDFGLSRY------VLDDE--YTSSVGSKFPV---RWSPPEVLMY-SKFSSKSDIW 205
Query: 551 SFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP--LSEVIDPALVKEIHAKRQ 607
+FG+++ EI + G++P N + + R RP SE + + H K
Sbjct: 206 AFGVLMWEIYSLGKMPYERFTNSETA--EHIAQGLRLYRPHLASEKVYTIMYSCWHEKAD 263
Query: 608 VLATFHIALN 617
TF I L+
Sbjct: 264 ERPTFKILLS 273
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 77/170 (45%), Gaps = 25/170 (14%)
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPP---LPWEA 451
EV +A ++HPNIV+ + + N ++ D+ G L+ ++A L W
Sbjct: 73 EVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFV 132
Query: 452 RLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTK 511
++ +A L ++H+ RK +H +IKS I L + + FG+ R+L T ++
Sbjct: 133 QICLA------LKHVHD---RKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVEL-- 181
Query: 512 NETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT 561
+R + YL+PE + K D+++ G VL E+ T
Sbjct: 182 ----------ARACIGTPYYLSPEI-CENKPYNNKSDIWALGCVLYELCT 220
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 131/314 (41%), Gaps = 58/314 (18%)
Query: 349 VVGKS-KNGIMYKVVVGRGSGMGAP-----TVVAVRRLTEGDATWR-FKDFESEVEAIAR 401
V+GK G +VV+ G+ T VAV+ L + DAT + D SE+E +
Sbjct: 31 VLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML-KSDATEKDLSDLISEMEMMKM 89
Query: 402 V-QHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHA----GPSDSLPP-------LPW 449
+ +H NI+ L + +I ++ G+L L A G S P L
Sbjct: 90 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSS 149
Query: 450 EARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKV 509
+ + A ARG+ Y+ + +K +H ++ + +L+ ++ I+ FGL R +
Sbjct: 150 KDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXX 206
Query: 510 TKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGP 569
K T R+ ++APEA ++ +T + DV+SFG++L EI T G
Sbjct: 207 KKT-------TNGRLPV---KWMAPEA-LFDRIYTHQSDVWSFGVLLWEIFTL----GGS 251
Query: 570 ENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQ----VLATFHIALNCTELDPEF 625
G +E L + L+KE H + + + +C P
Sbjct: 252 PYPGVPVEELFK----------------LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQ 295
Query: 626 RPRMRTVSESLDRV 639
RP + + E LDR+
Sbjct: 296 RPTFKQLVEDLDRI 309
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 87/192 (45%), Gaps = 22/192 (11%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
VA++ + EG + +DF E E + ++ HP +V+L L+ +F+ +G L
Sbjct: 34 VAIKTIREGAMS--EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSD 91
Query: 435 ALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCI 494
L E L + G+ Y+ E S +H ++ + L+ + +
Sbjct: 92 YLRTQRG----LFAAETLLGMCLDVCEGMAYLEEAS---VIHRDLAARNCLVGENQVIKV 144
Query: 495 SGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGI 554
S FG+ R + TS TG++ + +PE + S+++ K DV+SFG+
Sbjct: 145 SDFGMTRFVLDDQ--------YTSSTGTKFPV---KWASPEVFSF-SRYSSKSDVWSFGV 192
Query: 555 VLLEILT-GRLP 565
++ E+ + G++P
Sbjct: 193 LMWEVFSEGKIP 204
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 110/250 (44%), Gaps = 34/250 (13%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
VA++ + EG + +F E + + + H +V+L +I++++ NG L
Sbjct: 51 VAIKMIKEGSMS--EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN 108
Query: 435 AL----HAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDEL 490
L H + L L++ + + Y+ ++++H ++ + L++D+
Sbjct: 109 YLREMRHRFQTQQL--------LEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQG 157
Query: 491 HPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVY 550
+S FGL+R V +E TS GS+ + PE +Y SKF+ K D++
Sbjct: 158 VVKVSDFGLSRY------VLDDEE--TSSVGSKFPV---RWSPPEVLMY-SKFSSKSDIW 205
Query: 551 SFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP--LSEVIDPALVKEIHAKRQ 607
+FG+++ EI + G++P N + + R RP SE + + H K
Sbjct: 206 AFGVLMWEIYSLGKMPYERFTNSETA--EHIAQGLRLYRPHLASEKVYTIMYSCWHEKAD 263
Query: 608 VLATFHIALN 617
TF I L+
Sbjct: 264 ERPTFKILLS 273
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 126/314 (40%), Gaps = 50/314 (15%)
Query: 338 ELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMG---APTVVAVRRLTEGDATWRFKDFES 394
+L+++ R + ++ +G +V G+ SGM +P VAV+ L E + DF
Sbjct: 40 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 99
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAAL-HAGPSDSLP-PLPWEAR 452
E I++ H NIVR + + ++ + + G L + L P S P L
Sbjct: 100 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 159
Query: 453 LKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPC--------ISGFGLNRLLP 504
L +A+ A G Y+ E ++H +I + LL C I FG+ R +
Sbjct: 160 LHVARDIACGCQYLEE---NHFIHRDIAARNCLLT-----CPGPGRVAKIGDFGMARDIY 211
Query: 505 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GR 563
S K G + + ++ PEA + G FT K D +SFG++L EI + G
Sbjct: 212 RASYYRKG--------GCAMLPVK--WMPPEAFMEGI-FTSKTDTWSFGVLLWEIFSLGY 260
Query: 564 LPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDP 623
+P P + + V R +DP K + I C + P
Sbjct: 261 MP--YPSKSNQEVLEFVTSGGR--------MDP-------PKNCPGPVYRIMTQCWQHQP 303
Query: 624 EFRPRMRTVSESLD 637
E RP + E ++
Sbjct: 304 EDRPNFAIILERIE 317
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 125/314 (39%), Gaps = 50/314 (15%)
Query: 338 ELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMG---APTVVAVRRLTEGDATWRFKDFES 394
+L+++ R + ++ +G +V G+ SGM +P VAV+ L E + DF
Sbjct: 15 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 74
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAAL-HAGPSDSLP-PLPWEAR 452
E I++ H NIVR + + ++ + + G L + L P S P L
Sbjct: 75 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 134
Query: 453 LKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPC--------ISGFGLNRLLP 504
L +A+ A G Y+ E ++H +I + LL C I FG+ R +
Sbjct: 135 LHVARDIACGCQYLEE---NHFIHRDIAARNCLLT-----CPGPGRVAKIGDFGMARDIY 186
Query: 505 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GR 563
S K + + ++ PEA + G FT K D +SFG++L EI + G
Sbjct: 187 RASYYRKGGC----------AMLPVKWMPPEAFMEGI-FTSKTDTWSFGVLLWEIFSLGY 235
Query: 564 LPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDP 623
+P P + + V R +DP K + I C + P
Sbjct: 236 MPY--PSKSNQEVLEFVTSGGR--------MDP-------PKNCPGPVYRIMTQCWQHQP 278
Query: 624 EFRPRMRTVSESLD 637
E RP + E ++
Sbjct: 279 EDRPNFAIILERIE 292
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 113/263 (42%), Gaps = 45/263 (17%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK G ++K + R VVA++ + +A +D + E+ +++ P + +
Sbjct: 30 IGKGSFGEVFKGIDNRTQ-----KVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTK 84
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLK-IAQGTARGLMYIHE 468
Y + + +I +++ GS L GP D E ++ I + +GL Y+H
Sbjct: 85 YYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLD-------ETQIATILREILKGLDYLHS 137
Query: 469 YSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAIS 528
K +H +IK+ +LL + ++ FG+ L T ++ +N + T
Sbjct: 138 ---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT-QIKRNXFVGTP---------- 183
Query: 529 NVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAG----------PENDGKGLES 578
++APE I S + K D++S GI +E+ G P + P+N+ LE
Sbjct: 184 -FWMAPEV-IKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEG 241
Query: 579 LVRKAFRERRPLSEVIDPALVKE 601
+PL E ++ L KE
Sbjct: 242 ------NYSKPLKEFVEACLNKE 258
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 109/242 (45%), Gaps = 31/242 (12%)
Query: 337 LELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKD-FESE 395
+EL+D +G G+++KV + SG+ V R+L + ++ E
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVS-HKPSGL-----VMARKLIHLEIKPAIRNQIIRE 54
Query: 396 VEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKI 455
++ + P IV +Y++ E + + + GSL L +P + K+
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-----IPEQILGKV 109
Query: 456 AQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETI 515
+ +GL Y+ E K +H ++K + IL++ + FG++ L +++
Sbjct: 110 SIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL--------IDSM 159
Query: 516 VTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKG 575
S G+R Y++PE R+ G+ ++ + D++S G+ L+E+ GR P P D K
Sbjct: 160 ANSFVGTR------SYMSPE-RLQGTHYSVQSDIWSMGLSLVEMAVGRYPI--PPPDAKE 210
Query: 576 LE 577
LE
Sbjct: 211 LE 212
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 124/282 (43%), Gaps = 48/282 (17%)
Query: 373 TVVAVRRLTEGDATWR-FKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLISDFIRNG 430
T VAV+ L + DAT + D SE+E + + +H NI+ L + +I ++ G
Sbjct: 102 TKVAVKML-KSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 160
Query: 431 SLYAALHA----GPSDSLPP-------LPWEARLKIAQGTARGLMYIHEYSPRKYVHGNI 479
+L L A G S P L + + A ARG+ Y+ + +K +H ++
Sbjct: 161 NLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDL 217
Query: 480 KSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIY 539
+ +L+ ++ I+ FGL R + K T R+ ++APEA ++
Sbjct: 218 AARNVLVTEDNVMKIADFGLARDIHHIDYYKKT-------TNGRLPV---KWMAPEA-LF 266
Query: 540 GSKFTQKCDVYSFGIVLLEILT-GRLPDAG-PENDGKGLESLVRKAFRERRPLSEVIDPA 597
+T + DV+SFG++L EI T G P G P + L L+++ R +P +
Sbjct: 267 DRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE---LFKLLKEGHRMDKPSN------ 317
Query: 598 LVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 639
E+ + + +C P RP + + E LDR+
Sbjct: 318 CTNEL---------YMMMRDCWHAVPSQRPTFKQLVEDLDRI 350
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 126/314 (40%), Gaps = 50/314 (15%)
Query: 338 ELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMG---APTVVAVRRLTEGDATWRFKDFES 394
+L+++ R + ++ +G +V G+ SGM +P VAV+ L E + DF
Sbjct: 38 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLM 97
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAAL-HAGPSDSLP-PLPWEAR 452
E I++ H NIVR + + ++ + + G L + L P S P L
Sbjct: 98 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 157
Query: 453 LKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPC--------ISGFGLNRLLP 504
L +A+ A G Y+ E ++H +I + LL C I FG+ R +
Sbjct: 158 LHVARDIACGCQYLEE---NHFIHRDIAARNCLLT-----CPGPGRVAKIGDFGMARDIY 209
Query: 505 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GR 563
S K G + + ++ PEA + G FT K D +SFG++L EI + G
Sbjct: 210 RASYYRKG--------GCAMLPVK--WMPPEAFMEGI-FTSKTDTWSFGVLLWEIFSLGY 258
Query: 564 LPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDP 623
+P P + + V R +DP K + I C + P
Sbjct: 259 MPY--PSKSNQEVLEFVTSGGR--------MDP-------PKNCPGPVYRIMTQCWQHQP 301
Query: 624 EFRPRMRTVSESLD 637
E RP + E ++
Sbjct: 302 EDRPNFAIILERIE 315
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 126/314 (40%), Gaps = 50/314 (15%)
Query: 338 ELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMG---APTVVAVRRLTEGDATWRFKDFES 394
+L+++ R + ++ +G +V G+ SGM +P VAV+ L E + DF
Sbjct: 30 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 89
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAAL-HAGPSDSLP-PLPWEAR 452
E I++ H NIVR + + ++ + + G L + L P S P L
Sbjct: 90 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 149
Query: 453 LKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPC--------ISGFGLNRLLP 504
L +A+ A G Y+ E ++H +I + LL C I FG+ R +
Sbjct: 150 LHVARDIACGCQYLEE---NHFIHRDIAARNCLLT-----CPGPGRVAKIGDFGMARDIY 201
Query: 505 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GR 563
S K G + + ++ PEA + G FT K D +SFG++L EI + G
Sbjct: 202 RASYYRKG--------GCAMLPVK--WMPPEAFMEGI-FTSKTDTWSFGVLLWEIFSLGY 250
Query: 564 LPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDP 623
+P P + + V R +DP K + I C + P
Sbjct: 251 MP--YPSKSNQEVLEFVTSGGR--------MDP-------PKNCPGPVYRIMTQCWQHQP 293
Query: 624 EFRPRMRTVSESLD 637
E RP + E ++
Sbjct: 294 EDRPNFAIILERIE 307
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 125/314 (39%), Gaps = 50/314 (15%)
Query: 338 ELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMG---APTVVAVRRLTEGDATWRFKDFES 394
+L+++ R + ++ +G +V G+ SGM +P VAV+ L E + DF
Sbjct: 24 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 83
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAAL-HAGPSDSLP-PLPWEAR 452
E I++ H NIVR + + ++ + + G L + L P S P L
Sbjct: 84 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 143
Query: 453 LKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPC--------ISGFGLNRLLP 504
L +A+ A G Y+ E ++H +I + LL C I FG+ R +
Sbjct: 144 LHVARDIACGCQYLEE---NHFIHRDIAARNCLLT-----CPGPGRVAKIGDFGMARDIY 195
Query: 505 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GR 563
S K + + ++ PEA + G FT K D +SFG++L EI + G
Sbjct: 196 RASYYRKGGC----------AMLPVKWMPPEAFMEGI-FTSKTDTWSFGVLLWEIFSLGY 244
Query: 564 LPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDP 623
+P P + + V R +DP K + I C + P
Sbjct: 245 MP--YPSKSNQEVLEFVTSGGR--------MDP-------PKNCPGPVYRIMTQCWQHQP 287
Query: 624 EFRPRMRTVSESLD 637
E RP + E ++
Sbjct: 288 EDRPNFAIILERIE 301
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 109/242 (45%), Gaps = 31/242 (12%)
Query: 337 LELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKD-FESE 395
+EL+D +G G+++KV + SG+ V R+L + ++ E
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVS-HKPSGL-----VMARKLIHLEIKPAIRNQIIRE 54
Query: 396 VEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKI 455
++ + P IV +Y++ E + + + GSL L +P + K+
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-----IPEQILGKV 109
Query: 456 AQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETI 515
+ +GL Y+ E K +H ++K + IL++ + FG++ L +++
Sbjct: 110 SIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL--------IDSM 159
Query: 516 VTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKG 575
S G+R Y++PE R+ G+ ++ + D++S G+ L+E+ GR P P D K
Sbjct: 160 ANSFVGTR------SYMSPE-RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPP--DAKE 210
Query: 576 LE 577
LE
Sbjct: 211 LE 212
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 110/250 (44%), Gaps = 34/250 (13%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
VA++ + EG + +F E + + + H +V+L +I++++ NG L
Sbjct: 36 VAIKMIKEGSMS--EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN 93
Query: 435 AL----HAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDEL 490
L H + L L++ + + Y+ ++++H ++ + L++D+
Sbjct: 94 YLREMRHRFQTQQL--------LEMCKDVCEAMEYL---ESKQFLHRDLAARNCLVNDQG 142
Query: 491 HPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVY 550
+S FGL+R V +E TS GS+ + PE +Y SKF+ K D++
Sbjct: 143 VVKVSDFGLSRY------VLDDE--YTSSVGSKFPV---RWSPPEVLMY-SKFSSKSDIW 190
Query: 551 SFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP--LSEVIDPALVKEIHAKRQ 607
+FG+++ EI + G++P N + + R RP SE + + H K
Sbjct: 191 AFGVLMWEIYSLGKMPYERFTNSETA--EHIAQGLRLYRPHLASEKVYTIMYSCWHEKAD 248
Query: 608 VLATFHIALN 617
TF I L+
Sbjct: 249 ERPTFKILLS 258
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 83/183 (45%), Gaps = 29/183 (15%)
Query: 394 SEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAAL-HAGPSDSLPPLPWEAR 452
+E+ + + HPNI++L + L+++F G L+ + + D
Sbjct: 95 NEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAAN---- 150
Query: 453 LKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDE---LHPCISGFGLNRLLPGTSKV 509
I + G+ Y+H+++ VH +IK ILL+++ L+ I FGL+ K+
Sbjct: 151 --IMKQILSGICYLHKHNI---VHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKL 205
Query: 510 TKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGP 569
R + Y+APE + K+ +KCDV+S G+++ +L G P G
Sbjct: 206 -------------RDRLGTAYYIAPE--VLKKKYNEKCDVWSCGVIMYILLCG-YPPFGG 249
Query: 570 END 572
+ND
Sbjct: 250 QND 252
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 109/250 (43%), Gaps = 34/250 (13%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
VA++ + EG + +F E + + + H +V+L +I++++ NG L
Sbjct: 36 VAIKMIKEGSMS--EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN 93
Query: 435 AL----HAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDEL 490
L H + L L++ + + Y+ ++++H ++ + L++D+
Sbjct: 94 YLREMRHRFQTQQL--------LEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQG 142
Query: 491 HPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVY 550
+S FGL+R V +E T SR S + PE +Y SKF+ K D++
Sbjct: 143 VVKVSDFGLSRY------VLDDEY-----TSSRGSKFPVRWSPPEVLMY-SKFSSKSDIW 190
Query: 551 SFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP--LSEVIDPALVKEIHAKRQ 607
+FG+++ EI + G++P N + + R RP SE + + H K
Sbjct: 191 AFGVLMWEIYSLGKMPYERFTNSETA--EHIAQGLRLYRPHLASEKVYTIMYSCWHEKAD 248
Query: 608 VLATFHIALN 617
TF I L+
Sbjct: 249 ERPTFKILLS 258
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 99/230 (43%), Gaps = 34/230 (14%)
Query: 343 LRASAYVVGKSKN-GIMYKVVVGRGSGMGAPTVVAV---RRLTEGDATWRFKDFESEVEA 398
++ Y++G + G KV VG+ G V + +++ D + + E++
Sbjct: 13 VKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIR---REIQN 69
Query: 399 IARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQG 458
+ +HP+I++L + ++ +++ G L+ + L + ++ Q
Sbjct: 70 LKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGR-----LDEKESRRLFQQ 124
Query: 459 TARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTS 518
G+ Y H + VH ++K +LLD ++ I+ FGL+ ++ +
Sbjct: 125 ILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMM-------------SD 168
Query: 519 GTGSRISAISNVYLAPEA---RIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
G R S S Y APE R+Y + D++S G++L +L G LP
Sbjct: 169 GEFLRXSCGSPNYAAPEVISGRLYAGP---EVDIWSSGVILYALLCGTLP 215
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 110/250 (44%), Gaps = 34/250 (13%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
VA++ + EG + +F E + + + H +V+L +I++++ NG L
Sbjct: 31 VAIKMIKEGSMS--EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN 88
Query: 435 AL----HAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDEL 490
L H + L L++ + + Y+ ++++H ++ + L++D+
Sbjct: 89 YLREMRHRFQTQQL--------LEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQG 137
Query: 491 HPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVY 550
+S FGL+R V +E TS GS+ + PE +Y SKF+ K D++
Sbjct: 138 VVKVSDFGLSRY------VLDDE--YTSSVGSKFPV---RWSPPEVLMY-SKFSSKSDIW 185
Query: 551 SFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP--LSEVIDPALVKEIHAKRQ 607
+FG+++ EI + G++P N + + R RP SE + + H K
Sbjct: 186 AFGVLMWEIYSLGKMPYERFTNSETA--EHIAQGLRLYRPHLASEKVYTIMYSCWHEKAD 243
Query: 608 VLATFHIALN 617
TF I L+
Sbjct: 244 ERPTFKILLS 253
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 110/250 (44%), Gaps = 34/250 (13%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
VA++ + EG + +F E + + + H +V+L +I++++ NG L
Sbjct: 35 VAIKMIKEGSMS--EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN 92
Query: 435 AL----HAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDEL 490
L H + L L++ + + Y+ ++++H ++ + L++D+
Sbjct: 93 YLREMRHRFQTQQL--------LEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQG 141
Query: 491 HPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVY 550
+S FGL+R V +E TS GS+ + PE +Y SKF+ K D++
Sbjct: 142 VVKVSDFGLSRY------VLDDE--YTSSVGSKFPV---RWSPPEVLMY-SKFSSKSDIW 189
Query: 551 SFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP--LSEVIDPALVKEIHAKRQ 607
+FG+++ EI + G++P N + + R RP SE + + H K
Sbjct: 190 AFGVLMWEIYSLGKMPYERFTNSETA--EHIAQGLRLYRPHLASEKVYTIMYSCWHEKAD 247
Query: 608 VLATFHIALN 617
TF I L+
Sbjct: 248 ERPTFKILLS 257
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 125/314 (39%), Gaps = 50/314 (15%)
Query: 338 ELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMG---APTVVAVRRLTEGDATWRFKDFES 394
+L+++ R + ++ +G +V G+ SGM +P VAV+ L E + DF
Sbjct: 41 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 100
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAAL-HAGPSDSLP-PLPWEAR 452
E I++ H NIVR + + ++ + + G L + L P S P L
Sbjct: 101 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 160
Query: 453 LKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTK- 511
L +A+ A G Y+ E ++H +I + LL PG +V K
Sbjct: 161 LHVARDIACGCQYLEE---NHFIHRDIAARNCLLT---------------CPGPGRVAKI 202
Query: 512 -----NETIVTSGTGSR--ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GR 563
I +G + + + ++ PEA + G FT K D +SFG++L EI + G
Sbjct: 203 GDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGI-FTSKTDTWSFGVLLWEIFSLGY 261
Query: 564 LPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDP 623
+P P + + V R +DP K + I C + P
Sbjct: 262 MPY--PSKSNQEVLEFVTSGGR--------MDP-------PKNCPGPVYRIMTQCWQHQP 304
Query: 624 EFRPRMRTVSESLD 637
E RP + E ++
Sbjct: 305 EDRPNFAIILERIE 318
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 125/314 (39%), Gaps = 50/314 (15%)
Query: 338 ELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMG---APTVVAVRRLTEGDATWRFKDFES 394
+L+++ R + ++ +G +V G+ SGM +P VAV+ L E + DF
Sbjct: 64 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 123
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAAL-HAGPSDSLP-PLPWEAR 452
E I++ H NIVR + + ++ + + G L + L P S P L
Sbjct: 124 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 183
Query: 453 LKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTK- 511
L +A+ A G Y+ E ++H +I + LL PG +V K
Sbjct: 184 LHVARDIACGCQYLEE---NHFIHRDIAARNCLLT---------------CPGPGRVAKI 225
Query: 512 -----NETIVTSGTGSR--ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GR 563
I +G + + + ++ PEA + G FT K D +SFG++L EI + G
Sbjct: 226 GDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGI-FTSKTDTWSFGVLLWEIFSLGY 284
Query: 564 LPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDP 623
+P P + + V R +DP K + I C + P
Sbjct: 285 MPY--PSKSNQEVLEFVTSGGR--------MDP-------PKNCPGPVYRIMTQCWQHQP 327
Query: 624 EFRPRMRTVSESLD 637
E RP + E ++
Sbjct: 328 EDRPNFAIILERIE 341
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 126/314 (40%), Gaps = 50/314 (15%)
Query: 338 ELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMG---APTVVAVRRLTEGDATWRFKDFES 394
+L+++ R + ++ +G +V G+ SGM +P VAV+ L E + DF
Sbjct: 50 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 109
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAAL-HAGPSDSLP-PLPWEAR 452
E I++ H NIVR + + ++ + + G L + L P S P L
Sbjct: 110 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 169
Query: 453 LKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPC--------ISGFGLNRLLP 504
L +A+ A G Y+ E ++H +I + LL C I FG+ R +
Sbjct: 170 LHVARDIACGCQYLEE---NHFIHRDIAARNCLLT-----CPGPGRVAKIGDFGMARDIY 221
Query: 505 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GR 563
S K G + + ++ PEA + G FT K D +SFG++L EI + G
Sbjct: 222 RASYYRKG--------GCAMLPVK--WMPPEAFMEGI-FTSKTDTWSFGVLLWEIFSLGY 270
Query: 564 LPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDP 623
+P P + + V R +DP K + I C + P
Sbjct: 271 MP--YPSKSNQEVLEFVTSGGR--------MDP-------PKNCPGPVYRIMTQCWQHQP 313
Query: 624 EFRPRMRTVSESLD 637
E RP + E ++
Sbjct: 314 EDRPNFAIILERIE 327
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 110/250 (44%), Gaps = 34/250 (13%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
VA++ + EG + +F E + + + H +V+L +I++++ NG L
Sbjct: 42 VAIKMIKEGSMS--EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN 99
Query: 435 AL----HAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDEL 490
L H + L L++ + + Y+ ++++H ++ + L++D+
Sbjct: 100 YLREMRHRFQTQQL--------LEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQG 148
Query: 491 HPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVY 550
+S FGL+R V +E TS GS+ + PE +Y SKF+ K D++
Sbjct: 149 VVKVSDFGLSRY------VLDDE--YTSSVGSKFPV---RWSPPEVLMY-SKFSSKSDIW 196
Query: 551 SFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP--LSEVIDPALVKEIHAKRQ 607
+FG+++ EI + G++P N + + R RP SE + + H K
Sbjct: 197 AFGVLMWEIYSLGKMPYERFTNSETA--EHIAQGLRLYRPHLASEKVYTIMYSCWHEKAD 254
Query: 608 VLATFHIALN 617
TF I L+
Sbjct: 255 ERPTFKILLS 264
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 124/289 (42%), Gaps = 46/289 (15%)
Query: 349 VVGKSKNGIMYK-VVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNI 407
V+ G +YK + + G + P VA++ L E + K+ E +A V +P++
Sbjct: 29 VLSSGAFGTVYKGLWIPEGEKVKIP--VAIKELREATSPKANKEILDEAYVMASVDNPHV 86
Query: 408 VRLKAFYYANDEKLLISDFIRNGSL--YAALHAGPSDSLPPLPWEARLKIAQGTARGLMY 465
RL + +L I + G L Y H S L W ++ A+G+ Y
Sbjct: 87 CRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNY 139
Query: 466 IHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRIS 525
+ + R+ VH ++ + +L+ H I+ FGL +LL K E G ++
Sbjct: 140 LED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE-------GGKVP 189
Query: 526 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLP-DAGPENDGKGLESLVRKA 583
++A E+ I +T + DV+S+G+ + E++T G P D P ++ + S++ K
Sbjct: 190 I---KWMALES-ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSILEKG 242
Query: 584 FRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTV 632
R +P ID + I + C +D + RP+ R +
Sbjct: 243 ERLPQPPICTID---------------VYMIMVKCWMIDADSRPKFREL 276
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 89/220 (40%), Gaps = 44/220 (20%)
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLK 454
E+E A + HPNI+RL ++Y LI ++ G LY L + +
Sbjct: 73 EIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCT-----FDEQRTAT 127
Query: 455 IAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNET 514
I + A LMY H +K +H +IK +LL + I+ FG + P + T T
Sbjct: 128 IMEELADALMYCH---GKKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTMCGT 184
Query: 515 IVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP-DAGPENDG 573
+ YL PE I G +K D++ G++ E+L G P ++ N+
Sbjct: 185 L--------------DYLPPEM-IEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNET 229
Query: 574 ----------------KGLESLVRKAFR----ERRPLSEV 593
G + L+ K R ER PL++V
Sbjct: 230 YRRIVKVDLKFPASVPTGAQDLISKLLRHNPSERLPLAQV 269
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 113/263 (42%), Gaps = 45/263 (17%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK G ++K + R VVA++ + +A +D + E+ +++ P + +
Sbjct: 35 IGKGSFGEVFKGIDNR-----TQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTK 89
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLK-IAQGTARGLMYIHE 468
Y + + +I +++ GS L GP D E ++ I + +GL Y+H
Sbjct: 90 YYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLD-------ETQIATILREILKGLDYLHS 142
Query: 469 YSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAIS 528
K +H +IK+ +LL + ++ FG+ L T ++ +N + T
Sbjct: 143 ---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT-QIKRNTFVGTP---------- 188
Query: 529 NVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAG----------PENDGKGLES 578
++APE I S + K D++S GI +E+ G P + P+N+ LE
Sbjct: 189 -FWMAPEV-IKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEG 246
Query: 579 LVRKAFRERRPLSEVIDPALVKE 601
+PL E ++ L KE
Sbjct: 247 ------NYSKPLKEFVEACLNKE 263
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 124/289 (42%), Gaps = 46/289 (15%)
Query: 349 VVGKSKNGIMYK-VVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNI 407
V+G G +YK + + G + P VA++ L E + K+ E +A V +P++
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIP--VAIKELREATSPKANKEILDEAYVMASVDNPHV 81
Query: 408 VRLKAFYYANDEKLLISDFIRNGSL--YAALHAGPSDSLPPLPWEARLKIAQGTARGLMY 465
RL + + LI + G L Y H S L W ++ A+G+ Y
Sbjct: 82 CRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNY 134
Query: 466 IHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRIS 525
+ + R+ VH ++ + +L+ H I+ FG +LL K E G ++
Sbjct: 135 LED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE-------GGKVP 184
Query: 526 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLP-DAGPENDGKGLESLVRKA 583
++A E+ I +T + DV+S+G+ + E++T G P D P ++ + S++ K
Sbjct: 185 I---KWMALES-ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSILEKG 237
Query: 584 FRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTV 632
R +P ID + I + C +D + RP+ R +
Sbjct: 238 ERLPQPPICTID---------------VYMIMVKCWMIDADSRPKFREL 271
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 99/231 (42%), Gaps = 37/231 (16%)
Query: 360 KVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDE 419
KV + R G + + T+ + T K F EV + + HPNIV+L
Sbjct: 30 KVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVKLFEVIETEKT 88
Query: 420 KLLISDFIRNGSL--YAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHG 477
LI ++ G + Y H + EAR K Q + Y H+ ++ VH
Sbjct: 89 LYLIMEYASGGEVFDYLVAHGRMKEK------EARSKFRQ-IVSAVQYCHQ---KRIVHR 138
Query: 478 NIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNV--YLAPE 535
++K+ +LLD +++ I+ FG + NE V G ++ A Y APE
Sbjct: 139 DLKAENLLLDADMNIKIADFGFS-----------NEFTV----GGKLDAFCGAPPYAAPE 183
Query: 536 ARIYGSKFTQ-KCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR 585
G K+ + DV+S G++L +++G LP DG+ L+ L + R
Sbjct: 184 L-FQGKKYDGPEVDVWSLGVILYTLVSGSLP-----FDGQNLKELRERVLR 228
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 124/289 (42%), Gaps = 46/289 (15%)
Query: 349 VVGKSKNGIMYK-VVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNI 407
V+G G +YK + + G + P VA++ L E + K+ E +A V +P++
Sbjct: 26 VLGSGAFGTVYKGLWIPEGEKVKIP--VAIKELREATSPKANKEILDEAYVMASVDNPHV 83
Query: 408 VRLKAFYYANDEKLLISDFIRNGSL--YAALHAGPSDSLPPLPWEARLKIAQGTARGLMY 465
RL + + LI + G L Y H S L W ++ A+G+ Y
Sbjct: 84 CRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNY 136
Query: 466 IHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRIS 525
+ + R+ VH ++ + +L+ H I+ FG +LL K E G ++
Sbjct: 137 LED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE-------GGKVP 186
Query: 526 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLP-DAGPENDGKGLESLVRKA 583
++A E+ I +T + DV+S+G+ + E++T G P D P ++ + S++ K
Sbjct: 187 I---KWMALES-ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSILEKG 239
Query: 584 FRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTV 632
R +P ID + I + C +D + RP+ R +
Sbjct: 240 ERLPQPPICTID---------------VYMIMVKCWMIDADSRPKFREL 273
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 113/263 (42%), Gaps = 45/263 (17%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK G ++K + R VVA++ + +A +D + E+ +++ P + +
Sbjct: 15 IGKGSFGEVFKGIDNR-----TQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTK 69
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLK-IAQGTARGLMYIHE 468
Y + + +I +++ GS L GP D E ++ I + +GL Y+H
Sbjct: 70 YYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLD-------ETQIATILREILKGLDYLHS 122
Query: 469 YSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAIS 528
K +H +IK+ +LL + ++ FG+ L T ++ +N + T
Sbjct: 123 ---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT-QIKRNTFVGTP---------- 168
Query: 529 NVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAG----------PENDGKGLES 578
++APE I S + K D++S GI +E+ G P + P+N+ LE
Sbjct: 169 -FWMAPEV-IKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEG 226
Query: 579 LVRKAFRERRPLSEVIDPALVKE 601
+PL E ++ L KE
Sbjct: 227 ------NYSKPLKEFVEACLNKE 243
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 99/246 (40%), Gaps = 53/246 (21%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDF--ESEVEAIARVQHPN 406
++G+ + G +YK GS P V V ++F E + + ++H N
Sbjct: 20 LIGRGRYGAVYK-----GSLDERPVAVKVFSFANR------QNFINEKNIYRVPLMEHDN 68
Query: 407 IVRLKAFYYANDEK---------LLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQ 457
I R + DE+ LL+ ++ NGSL L SD W + ++A
Sbjct: 69 IAR----FIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSD------WVSSCRLAH 118
Query: 458 GTARGLMYIHEYSPR------KYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTK 511
RGL Y+H PR H ++ S +L+ ++ IS FGL+ L G V
Sbjct: 119 SVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRP 178
Query: 512 NETIVTSGTGSRISAISNV-YLAPEA-------RIYGSKFTQKCDVYSFGIVLLEILTGR 563
E + IS + + Y+APE R S Q D+Y+ G++ EI R
Sbjct: 179 GEE-----DNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQ-VDMYALGLIYWEIFM-R 231
Query: 564 LPDAGP 569
D P
Sbjct: 232 CTDLFP 237
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 113/263 (42%), Gaps = 45/263 (17%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK G ++K + R VVA++ + +A +D + E+ +++ P + +
Sbjct: 15 IGKGSFGEVFKGIDNR-----TQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTK 69
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLK-IAQGTARGLMYIHE 468
Y + + +I +++ GS L GP D E ++ I + +GL Y+H
Sbjct: 70 YYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLD-------ETQIATILREILKGLDYLHS 122
Query: 469 YSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAIS 528
K +H +IK+ +LL + ++ FG+ L T ++ +N + T
Sbjct: 123 ---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT-QIKRNXFVGTP---------- 168
Query: 529 NVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAG----------PENDGKGLES 578
++APE I S + K D++S GI +E+ G P + P+N+ LE
Sbjct: 169 -FWMAPEV-IKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEG 226
Query: 579 LVRKAFRERRPLSEVIDPALVKE 601
+PL E ++ L KE
Sbjct: 227 ------NYSKPLKEFVEACLNKE 243
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 109/242 (45%), Gaps = 31/242 (12%)
Query: 337 LELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKD-FESE 395
+EL+D +G G+++KV + SG+ V R+L + ++ E
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVS-HKPSGL-----VMARKLIHLEIKPAIRNQIIRE 54
Query: 396 VEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKI 455
++ + P IV +Y++ E + + + GSL L +P + K+
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-----IPEQILGKV 109
Query: 456 AQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETI 515
+ +GL Y+ E K +H ++K + IL++ + FG++ L +++
Sbjct: 110 SIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI--------DSM 159
Query: 516 VTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKG 575
S G+R Y++PE R+ G+ ++ + D++S G+ L+E+ GR P P D K
Sbjct: 160 ANSFVGTR------SYMSPE-RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPP--DAKE 210
Query: 576 LE 577
LE
Sbjct: 211 LE 212
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 109/242 (45%), Gaps = 31/242 (12%)
Query: 337 LELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKD-FESE 395
+EL+D +G G+++KV + SG+ V R+L + ++ E
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVS-HKPSGL-----VMARKLIHLEIKPAIRNQIIRE 54
Query: 396 VEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKI 455
++ + P IV +Y++ E + + + GSL L +P + K+
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-----IPEQILGKV 109
Query: 456 AQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETI 515
+ +GL Y+ E K +H ++K + IL++ + FG++ L +++
Sbjct: 110 SIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI--------DSM 159
Query: 516 VTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKG 575
S G+R Y++PE R+ G+ ++ + D++S G+ L+E+ GR P P D K
Sbjct: 160 ANSFVGTR------SYMSPE-RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPP--DAKE 210
Query: 576 LE 577
LE
Sbjct: 211 LE 212
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 131/314 (41%), Gaps = 58/314 (18%)
Query: 349 VVGKS-KNGIMYKVVVGRGSGMGAP-----TVVAVRRLTEGDATWR-FKDFESEVEAIAR 401
V+GK G +VV+ G+ T VAV+ L + DAT + D SE+E +
Sbjct: 20 VLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML-KSDATEKDLSDLISEMEMMKM 78
Query: 402 V-QHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHA----GPSDSLPP-------LPW 449
+ +H NI+ L + +I ++ G+L L A G S P L
Sbjct: 79 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 138
Query: 450 EARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKV 509
+ + A ARG+ Y+ + +K +H ++ + +L+ ++ I+ FGL R +
Sbjct: 139 KDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 195
Query: 510 TKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGP 569
K T R+ ++APEA ++ +T + DV+SFG++L EI T G
Sbjct: 196 KKT-------TNGRLPV---KWMAPEA-LFDRIYTHQSDVWSFGVLLWEIFTL----GGS 240
Query: 570 ENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQ----VLATFHIALNCTELDPEF 625
G +E L + L+KE H + + + +C P
Sbjct: 241 PYPGVPVEELFK----------------LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQ 284
Query: 626 RPRMRTVSESLDRV 639
RP + + E LDR+
Sbjct: 285 RPTFKQLVEDLDRI 298
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 124/282 (43%), Gaps = 48/282 (17%)
Query: 373 TVVAVRRLTEGDATWR-FKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLISDFIRNG 430
T VAV+ L + DAT + D SE+E + + +H NI+ L + +I ++ G
Sbjct: 61 TKVAVKML-KSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 119
Query: 431 SLYAALHA----GPSDSLPP-------LPWEARLKIAQGTARGLMYIHEYSPRKYVHGNI 479
+L L A G S P L + + A ARG+ Y+ + +K +H ++
Sbjct: 120 NLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDL 176
Query: 480 KSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIY 539
+ +L+ ++ I+ FGL R + K T R+ ++APEA ++
Sbjct: 177 AARNVLVTEDNVMKIADFGLARDIHHIDYYKKT-------TNGRLPV---KWMAPEA-LF 225
Query: 540 GSKFTQKCDVYSFGIVLLEILT-GRLPDAG-PENDGKGLESLVRKAFRERRPLSEVIDPA 597
+T + DV+SFG++L EI T G P G P + L L+++ R +P +
Sbjct: 226 DRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE---LFKLLKEGHRMDKPSN------ 276
Query: 598 LVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 639
E+ + + +C P RP + + E LDR+
Sbjct: 277 CTNEL---------YMMMRDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 85/192 (44%), Gaps = 22/192 (11%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
VA++ + EG + DF E E + ++ HP +V+L L+ +F+ +G L
Sbjct: 54 VAIKTIKEGSMS--EDDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSD 111
Query: 435 ALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCI 494
L E L + G+ Y+ E +H ++ + L+ + +
Sbjct: 112 YLRTQRG----LFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKV 164
Query: 495 SGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGI 554
S FG+ R + TS TG++ + +PE + S+++ K DV+SFG+
Sbjct: 165 SDFGMTRFVLDDQ--------YTSSTGTKFPV---KWASPEVFSF-SRYSSKSDVWSFGV 212
Query: 555 VLLEILT-GRLP 565
++ E+ + G++P
Sbjct: 213 LMWEVFSEGKIP 224
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 124/282 (43%), Gaps = 48/282 (17%)
Query: 373 TVVAVRRLTEGDATWR-FKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLISDFIRNG 430
T VAV+ L + DAT + D SE+E + + +H NI+ L + +I ++ G
Sbjct: 53 TKVAVKML-KSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 111
Query: 431 SLYAALHA----GPSDSLPP-------LPWEARLKIAQGTARGLMYIHEYSPRKYVHGNI 479
+L L A G S P L + + A ARG+ Y+ + +K +H ++
Sbjct: 112 NLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDL 168
Query: 480 KSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIY 539
+ +L+ ++ I+ FGL R + K T R+ ++APEA ++
Sbjct: 169 AARNVLVTEDNVMKIADFGLARDIHHIDYYKKT-------TNGRLPV---KWMAPEA-LF 217
Query: 540 GSKFTQKCDVYSFGIVLLEILT-GRLPDAG-PENDGKGLESLVRKAFRERRPLSEVIDPA 597
+T + DV+SFG++L EI T G P G P + L L+++ R +P +
Sbjct: 218 DRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE---LFKLLKEGHRMDKPSN------ 268
Query: 598 LVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 639
E+ + + +C P RP + + E LDR+
Sbjct: 269 CTNEL---------YMMMRDCWHAVPSQRPTFKQLVEDLDRI 301
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 124/282 (43%), Gaps = 48/282 (17%)
Query: 373 TVVAVRRLTEGDATWR-FKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLISDFIRNG 430
T VAV+ L + DAT + D SE+E + + +H NI+ L + +I ++ G
Sbjct: 61 TKVAVKML-KSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 119
Query: 431 SLYAALHA----GPSDSLPP-------LPWEARLKIAQGTARGLMYIHEYSPRKYVHGNI 479
+L L A G S P L + + A ARG+ Y+ + +K +H ++
Sbjct: 120 NLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDL 176
Query: 480 KSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIY 539
+ +L+ ++ I+ FGL R + K T R+ ++APEA ++
Sbjct: 177 AARNVLVTEDNVMKIADFGLARDIHHIDYYKKT-------TNGRLPV---KWMAPEA-LF 225
Query: 540 GSKFTQKCDVYSFGIVLLEILT-GRLPDAG-PENDGKGLESLVRKAFRERRPLSEVIDPA 597
+T + DV+SFG++L EI T G P G P + L L+++ R +P +
Sbjct: 226 DRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE---LFKLLKEGHRMDKPSN------ 276
Query: 598 LVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 639
E+ + + +C P RP + + E LDR+
Sbjct: 277 CTNEL---------YMMMRDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 124/289 (42%), Gaps = 46/289 (15%)
Query: 349 VVGKSKNGIMYK-VVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNI 407
V+G G +YK + + G + P VA++ L E + K+ E +A V +P++
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIP--VAIKELREATSPKANKEILDEAYVMASVDNPHV 81
Query: 408 VRLKAFYYANDEKLLISDFIRNGSL--YAALHAGPSDSLPPLPWEARLKIAQGTARGLMY 465
RL + +L I+ + G L Y H S L W ++ A+G+ Y
Sbjct: 82 CRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNY 134
Query: 466 IHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRIS 525
+ + R+ VH ++ + +L+ H I+ FG +LL K E G ++
Sbjct: 135 LED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE-------GGKVP 184
Query: 526 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLP-DAGPENDGKGLESLVRKA 583
++A E+ I +T + DV+S+G+ + E++T G P D P ++ + S++ K
Sbjct: 185 I---KWMALES-ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSILEKG 237
Query: 584 FRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTV 632
R +P ID + I C +D + RP+ R +
Sbjct: 238 ERLPQPPICTID---------------VYMIMRKCWMIDADSRPKFREL 271
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 123/314 (39%), Gaps = 50/314 (15%)
Query: 338 ELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMG---APTVVAVRRLTEGDATWRFKDFES 394
+L+++ R + ++ +G +V G+ SGM +P VAV+ L E + DF
Sbjct: 24 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 83
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAAL-HAGPSDSLP-PLPWEAR 452
E I++ H NIVR + + ++ + + G L + L P S P L
Sbjct: 84 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 143
Query: 453 LKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKN 512
L +A+ A G Y+ E ++H +I + LL PG +V K
Sbjct: 144 LHVARDIACGCQYLEE---NHFIHRDIAARNCLLT---------------CPGPGRVAKI 185
Query: 513 ETIVTSGTGSRIS--------AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GR 563
+ R S + ++ PEA + G FT K D +SFG++L EI + G
Sbjct: 186 GDFGMAQDIYRASYYRKGGCAMLPVKWMPPEAFMEGI-FTSKTDTWSFGVLLWEIFSLGY 244
Query: 564 LPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDP 623
+P P + + V R +DP K + I C + P
Sbjct: 245 MP--YPSKSNQEVLEFVTSGGR--------MDP-------PKNCPGPVYRIMTQCWQHQP 287
Query: 624 EFRPRMRTVSESLD 637
E RP + E ++
Sbjct: 288 EDRPNFAIILERIE 301
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 86/192 (44%), Gaps = 22/192 (11%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
VA++ + EG + +DF E E + ++ HP +V+L L+ +F+ +G L
Sbjct: 34 VAIKTIREGAMS--EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSD 91
Query: 435 ALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCI 494
L E L + G+ Y+ E +H ++ + L+ + +
Sbjct: 92 YLRTQRG----LFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKV 144
Query: 495 SGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGI 554
S FG+ R + TS TG++ + +PE + S+++ K DV+SFG+
Sbjct: 145 SDFGMTRFVLDDQ--------YTSSTGTKFPV---KWASPEVFSF-SRYSSKSDVWSFGV 192
Query: 555 VLLEILT-GRLP 565
++ E+ + G++P
Sbjct: 193 LMWEVFSEGKIP 204
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 106/235 (45%), Gaps = 29/235 (12%)
Query: 337 LELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKD-FESE 395
+EL+D +G G+++KV + SG+ V R+L + ++ E
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVS-HKPSGL-----VMARKLIHLEIKPAIRNQIIRE 54
Query: 396 VEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKI 455
++ + P IV +Y++ E + + + GSL L +P + K+
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-----IPEQILGKV 109
Query: 456 AQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETI 515
+ +GL Y+ E K +H ++K + IL++ + FG++ L +++
Sbjct: 110 SIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL--------IDSM 159
Query: 516 VTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPE 570
S G+R Y++PE R+ G+ ++ + D++S G+ L+E+ GR P P+
Sbjct: 160 ANSFVGTR------SYMSPE-RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPD 207
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 124/282 (43%), Gaps = 48/282 (17%)
Query: 373 TVVAVRRLTEGDATWR-FKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLISDFIRNG 430
T VAV+ L + DAT + D SE+E + + +H NI+ L + +I ++ G
Sbjct: 54 TKVAVKML-KSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 112
Query: 431 SLYAALHA----GPSDSLPP-------LPWEARLKIAQGTARGLMYIHEYSPRKYVHGNI 479
+L L A G S P L + + A ARG+ Y+ + +K +H ++
Sbjct: 113 NLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDL 169
Query: 480 KSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIY 539
+ +L+ ++ I+ FGL R + K T R+ ++APEA ++
Sbjct: 170 AARNVLVTEDNVMKIADFGLARDIHHIDYYKKT-------TNGRLPV---KWMAPEA-LF 218
Query: 540 GSKFTQKCDVYSFGIVLLEILT-GRLPDAG-PENDGKGLESLVRKAFRERRPLSEVIDPA 597
+T + DV+SFG++L EI T G P G P + L L+++ R +P +
Sbjct: 219 DRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE---LFKLLKEGHRMDKPSN------ 269
Query: 598 LVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 639
E+ + + +C P RP + + E LDR+
Sbjct: 270 CTNEL---------YMMMRDCWHAVPSQRPTFKQLVEDLDRI 302
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 86/192 (44%), Gaps = 22/192 (11%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
VA++ + EG + +DF E E + ++ HP +V+L L+ +F+ +G L
Sbjct: 37 VAIKTIREGAMS--EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSD 94
Query: 435 ALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCI 494
L E L + G+ Y+ E +H ++ + L+ + +
Sbjct: 95 YLRTQRG----LFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKV 147
Query: 495 SGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGI 554
S FG+ R + TS TG++ + +PE + S+++ K DV+SFG+
Sbjct: 148 SDFGMTRFVLDDQ--------YTSSTGTKFPV---KWASPEVFSF-SRYSSKSDVWSFGV 195
Query: 555 VLLEILT-GRLP 565
++ E+ + G++P
Sbjct: 196 LMWEVFSEGKIP 207
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 126/296 (42%), Gaps = 46/296 (15%)
Query: 349 VVGKSKNGIMYK-VVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNI 407
V+G G +YK + + G + P VA++ L E + K+ E +A V P +
Sbjct: 24 VLGSGAFGTVYKGIWIPDGENVKIP--VAIKVLRENTSPKANKEILDEAYVMAGVGSPYV 81
Query: 408 VRLKAFYYANDEKLLISDFIRNGSL--YAALHAGPSDSLPPLPWEARLKIAQGTARGLMY 465
RL + +L ++ + G L + + G S L W ++ A+G+ Y
Sbjct: 82 SRLLGICLTSTVQL-VTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQI------AKGMSY 134
Query: 466 IHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRIS 525
+ + + VH ++ + +L+ H I+ FGL RLL +ET + G
Sbjct: 135 LEDV---RLVHRDLAARNVLVKSPNHVKITDFGLARLL------DIDETEYHADGGK--- 182
Query: 526 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLP-DAGPENDGKGLESLVRKA 583
+ ++A E+ I +FT + DV+S+G+ + E++T G P D P + + L+ K
Sbjct: 183 -VPIKWMALES-ILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIP---AREIPDLLEKG 237
Query: 584 FRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 639
R +P ID + I + C +D E RPR R + R+
Sbjct: 238 ERLPQPPICTID---------------VYMIMVKCWMIDSECRPRFRELVSEFSRM 278
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 89/216 (41%), Gaps = 26/216 (12%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK K G +Y + + A V+ +L + + + EVE + ++HPNI+R
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR---REVEIQSHLRHPNILR 98
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEY 469
L +++ LI ++ G++Y L L + A L Y H
Sbjct: 99 LYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTATYITELANALSYCHS- 152
Query: 470 SPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISN 529
++ +H +IK +LL I+ FG + P + + T T+
Sbjct: 153 --KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL-------------- 196
Query: 530 VYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
YL PE I G +K D++S G++ E L G+ P
Sbjct: 197 DYLPPEM-IEGRMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 86/192 (44%), Gaps = 22/192 (11%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
VA++ + EG + +DF E E + ++ HP +V+L L+ +F+ +G L
Sbjct: 32 VAIKTIREGAMS--EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSD 89
Query: 435 ALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCI 494
L E L + G+ Y+ E +H ++ + L+ + +
Sbjct: 90 YLRTQRG----LFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKV 142
Query: 495 SGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGI 554
S FG+ R + TS TG++ + +PE + S+++ K DV+SFG+
Sbjct: 143 SDFGMTRFVLDDQ--------YTSSTGTKFPV---KWASPEVFSF-SRYSSKSDVWSFGV 190
Query: 555 VLLEILT-GRLP 565
++ E+ + G++P
Sbjct: 191 LMWEVFSEGKIP 202
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 88/216 (40%), Gaps = 26/216 (12%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK K G +Y + + A V+ +L + + + EVE + ++HPNI+R
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR---REVEIQSHLRHPNILR 77
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEY 469
L +++ LI ++ G +Y L L + A L Y H
Sbjct: 78 LYGYFHDATRVYLILEYAPRGEVYKELQ-----KLSKFDEQRTATYITELANALSYCHS- 131
Query: 470 SPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISN 529
++ +H +IK +LL I+ FG + P + + T T+
Sbjct: 132 --KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL-------------- 175
Query: 530 VYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
YL PE I G +K D++S G++ E L G+ P
Sbjct: 176 DYLPPEM-IEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 89/197 (45%), Gaps = 29/197 (14%)
Query: 371 APTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNG 430
A ++ + L + D R E E+ + ++HP+I++L + DE +++ ++ N
Sbjct: 33 ALKIINKKVLAKSDMQGRI---EREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNE 89
Query: 431 SL-YAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDE 489
Y S+ EAR + Q + Y H + K VH ++K +LLD+
Sbjct: 90 LFDYIVQRDKMSEQ------EAR-RFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEH 139
Query: 490 LHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQ-KCD 548
L+ I+ FGL+ I+T G + S S Y APE I G + + D
Sbjct: 140 LNVKIADFGLS-------------NIMTDGNFLKTSCGSPNYAAPEV-ISGKLYAGPEVD 185
Query: 549 VYSFGIVLLEILTGRLP 565
V+S G++L +L RLP
Sbjct: 186 VWSCGVILYVMLCRRLP 202
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 90/216 (41%), Gaps = 26/216 (12%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK K G +Y + + A V+ +L + + + EVE + ++HPNI+R
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR---REVEIQSHLRHPNILR 73
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEY 469
L +++ LI ++ G++Y L L + A L Y H
Sbjct: 74 LYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHS- 127
Query: 470 SPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISN 529
++ +H +IK +LL I+ FG + P + + T SGT
Sbjct: 128 --KRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTT------LSGTLD------- 172
Query: 530 VYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
YL PE I G +K D++S G++ E L G+ P
Sbjct: 173 -YLPPEM-IEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 89/197 (45%), Gaps = 29/197 (14%)
Query: 371 APTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNG 430
A ++ + L + D R E E+ + ++HP+I++L + DE +++ ++ N
Sbjct: 43 ALKIINKKVLAKSDMQGRI---EREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNE 99
Query: 431 SL-YAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDE 489
Y S+ EAR + Q + Y H + K VH ++K +LLD+
Sbjct: 100 LFDYIVQRDKMSEQ------EAR-RFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEH 149
Query: 490 LHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQ-KCD 548
L+ I+ FGL+ I+T G + S S Y APE I G + + D
Sbjct: 150 LNVKIADFGLS-------------NIMTDGNFLKTSCGSPNYAAPEV-ISGKLYAGPEVD 195
Query: 549 VYSFGIVLLEILTGRLP 565
V+S G++L +L RLP
Sbjct: 196 VWSCGVILYVMLCRRLP 212
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 89/197 (45%), Gaps = 29/197 (14%)
Query: 371 APTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNG 430
A ++ + L + D R E E+ + ++HP+I++L + DE +++ ++ N
Sbjct: 37 ALKIINKKVLAKSDMQGRI---EREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNE 93
Query: 431 SL-YAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDE 489
Y S+ EAR + Q + Y H + K VH ++K +LLD+
Sbjct: 94 LFDYIVQRDKMSEQ------EAR-RFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEH 143
Query: 490 LHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQ-KCD 548
L+ I+ FGL+ I+T G + S S Y APE I G + + D
Sbjct: 144 LNVKIADFGLS-------------NIMTDGNFLKTSCGSPNYAAPEV-ISGKLYAGPEVD 189
Query: 549 VYSFGIVLLEILTGRLP 565
V+S G++L +L RLP
Sbjct: 190 VWSCGVILYVMLCRRLP 206
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 89/197 (45%), Gaps = 29/197 (14%)
Query: 371 APTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNG 430
A ++ + L + D R E E+ + ++HP+I++L + DE +++ ++ N
Sbjct: 42 ALKIINKKVLAKSDMQGRI---EREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNE 98
Query: 431 SL-YAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDE 489
Y S+ EAR + Q + Y H + K VH ++K +LLD+
Sbjct: 99 LFDYIVQRDKMSEQ------EAR-RFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEH 148
Query: 490 LHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQ-KCD 548
L+ I+ FGL+ I+T G + S S Y APE I G + + D
Sbjct: 149 LNVKIADFGLS-------------NIMTDGNFLKTSCGSPNYAAPEV-ISGKLYAGPEVD 194
Query: 549 VYSFGIVLLEILTGRLP 565
V+S G++L +L RLP
Sbjct: 195 VWSCGVILYVMLCRRLP 211
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 107/247 (43%), Gaps = 37/247 (14%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK G +YK G VVA++ + +A +D + E+ +++ P I R
Sbjct: 27 IGKGSFGEVYK-----GIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITR 81
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEY 469
Y + + +I +++ GS L GP L I + +GL Y+H
Sbjct: 82 YFGSYLKSTKLWIIMEYLGGGSALDLLKPGP------LEETYIATILREILKGLDYLH-- 133
Query: 470 SPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISN 529
S RK +H +IK+ +LL ++ ++ FG+ L T ++ +N + T
Sbjct: 134 SERK-IHRDIKAANVLLSEQGDVKLADFGVAGQLTDT-QIKRNXFVGTP----------- 180
Query: 530 VYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAG----------PENDGKGLESL 579
++APE I S + K D++S GI +E+ G P++ P+N LE
Sbjct: 181 FWMAPEV-IKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPPTLEGQ 239
Query: 580 VRKAFRE 586
K F+E
Sbjct: 240 HSKPFKE 246
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 89/216 (41%), Gaps = 26/216 (12%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK K G +Y + + A V+ +L + + + EVE + ++HPNI+R
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR---REVEIQSHLRHPNILR 89
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEY 469
L +++ LI ++ G++Y L L + A L Y H
Sbjct: 90 LYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTATYITELANALSYCH-- 142
Query: 470 SPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISN 529
++ +H +IK +LL I+ FG + P + + T T+
Sbjct: 143 -SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL-------------- 187
Query: 530 VYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
YL PE I G +K D++S G++ E L G+ P
Sbjct: 188 DYLPPEM-IEGRMHDEKVDLWSLGVLCYEFLVGKPP 222
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 89/216 (41%), Gaps = 26/216 (12%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK K G +Y + + A V+ +L + + + EVE + ++HPNI+R
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR---REVEIQSHLRHPNILR 77
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEY 469
L +++ LI ++ G++Y L L + A L Y H
Sbjct: 78 LYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHS- 131
Query: 470 SPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISN 529
++ +H +IK +LL I+ FG + P + + T T+
Sbjct: 132 --KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL-------------- 175
Query: 530 VYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
YL PE I G +K D++S G++ E L G+ P
Sbjct: 176 DYLPPEX-IEGRXHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 130/317 (41%), Gaps = 64/317 (20%)
Query: 349 VVGKS-KNGIMYKVVVGRGSGMGAP-----TVVAVRRLTEGDATWR-FKDFESEVEAIAR 401
V+GK G +VV+ G+ T VAV+ L + DAT + D SE+E +
Sbjct: 16 VLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML-KSDATEKDLSDLISEMEMMKM 74
Query: 402 V-QHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHA--------------GPSDSLPP 446
+ +H NI+ L + +I ++ G+L L A P + L
Sbjct: 75 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSS 134
Query: 447 LPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506
+ + A ARG+ Y+ + +K +H ++ + +L+ ++ I+ FGL R +
Sbjct: 135 ---KDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI 188
Query: 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPD 566
K T R+ ++APEA ++ +T + DV+SFG++L EI T
Sbjct: 189 DYYKKT-------TNGRLPV---KWMAPEA-LFDRIYTHQSDVWSFGVLLWEIFTL---- 233
Query: 567 AGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQ----VLATFHIALNCTELD 622
G G +E L + L+KE H + + + +C
Sbjct: 234 GGSPYPGVPVEELFK----------------LLKEGHRMDKPSNCTNELYMMMRDCWHAV 277
Query: 623 PEFRPRMRTVSESLDRV 639
P RP + + E LDR+
Sbjct: 278 PSQRPTFKQLVEDLDRI 294
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 96/224 (42%), Gaps = 37/224 (16%)
Query: 359 YKVVVGRGSGMGAPTVVAVRRLTEGD--------ATWRFKDFES---EVEAIARVQHPNI 407
Y +V G G + R+T+ + A+ + KD + EVE + ++ HPNI
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNI 83
Query: 408 VRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIH 467
++L + ++ + G L+ + S +I + G+ Y+H
Sbjct: 84 MKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA-----RIIKQVFSGITYMH 138
Query: 468 EYSPRKYVHGNIKSTKILLDDELHPC---ISGFGLNRLLPGTSKVTKNETIVTSGTGSRI 524
+++ VH ++K ILL+ + C I FGL+ +K+ RI
Sbjct: 139 KHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMK-----------DRI 184
Query: 525 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAG 568
+ Y+APE + + +KCDV+S G++L +L+G P G
Sbjct: 185 G--TAYYIAPE--VLRGTYDEKCDVWSAGVILYILLSGTPPFYG 224
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 89/216 (41%), Gaps = 26/216 (12%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK K G +Y + + A V+ +L + + + EVE + ++HPNI+R
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR---REVEIQSHLRHPNILR 74
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEY 469
L +++ LI ++ G++Y L L + A L Y H
Sbjct: 75 LYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHS- 128
Query: 470 SPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISN 529
++ +H +IK +LL I+ FG + P + + T T+
Sbjct: 129 --KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTL-------------- 172
Query: 530 VYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
YL PE I G +K D++S G++ E L G+ P
Sbjct: 173 DYLPPEM-IEGRMHDEKVDLWSLGVLCYEFLVGKPP 207
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 130/317 (41%), Gaps = 64/317 (20%)
Query: 349 VVGKS-KNGIMYKVVVGRGSGMGAP-----TVVAVRRLTEGDATWR-FKDFESEVEAIAR 401
V+GK G +VV+ G+ T VAV+ L + DAT + D SE+E +
Sbjct: 31 VLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML-KSDATEKDLSDLISEMEMMKM 89
Query: 402 V-QHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHA--------------GPSDSLPP 446
+ +H NI+ L + +I ++ G+L L A P + L
Sbjct: 90 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSS 149
Query: 447 LPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506
+ + A ARG+ Y+ + +K +H ++ + +L+ ++ I+ FGL R +
Sbjct: 150 ---KDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI 203
Query: 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPD 566
K T R+ ++APEA ++ +T + DV+SFG++L EI T
Sbjct: 204 DYYKKT-------TNGRLPV---KWMAPEA-LFDRIYTHQSDVWSFGVLLWEIFTL---- 248
Query: 567 AGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQ----VLATFHIALNCTELD 622
G G +E L + L+KE H + + + +C
Sbjct: 249 GGSPYPGVPVEELFK----------------LLKEGHRMDKPSNCTNELYMMMRDCWHAV 292
Query: 623 PEFRPRMRTVSESLDRV 639
P RP + + E LDR+
Sbjct: 293 PSQRPTFKQLVEDLDRI 309
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 106/247 (42%), Gaps = 37/247 (14%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK G ++K + R VVA++ + +A +D + E+ +++ + +
Sbjct: 31 IGKGSFGEVFKGIDNR-----TQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTK 85
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEY 469
Y + +I +++ GS L AGP D + + +GL Y+H
Sbjct: 86 YYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEF------QIATMLKEILKGLDYLHS- 138
Query: 470 SPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISN 529
K +H +IK+ +LL ++ ++ FG+ L T ++ +N + T
Sbjct: 139 --EKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDT-QIKRNTFVGTP----------- 184
Query: 530 VYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAG----------PENDGKGLESL 579
++APE I S + K D++S GI +E+ G P++ P+N+ L
Sbjct: 185 FWMAPEV-IQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLVGD 243
Query: 580 VRKAFRE 586
K+F+E
Sbjct: 244 FTKSFKE 250
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 89/216 (41%), Gaps = 26/216 (12%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK K G +Y + + A V+ +L + + + EVE + ++HPNI+R
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR---REVEIQSHLRHPNILR 72
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEY 469
L +++ LI ++ G++Y L L + A L Y H
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHS- 126
Query: 470 SPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISN 529
++ +H +IK +LL I+ FG + P + + T T+
Sbjct: 127 --KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL-------------- 170
Query: 530 VYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
YL PE I G +K D++S G++ E L G+ P
Sbjct: 171 DYLPPEM-IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 123/289 (42%), Gaps = 46/289 (15%)
Query: 349 VVGKSKNGIMYK-VVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNI 407
V+G G +YK + + G + P VA++ L E + K+ E +A V +P++
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIP--VAIKELREATSPKANKEILDEAYVMASVDNPHV 81
Query: 408 VRLKAFYYANDEKLLISDFIRNGSL--YAALHAGPSDSLPPLPWEARLKIAQGTARGLMY 465
RL + + LI + G L Y H S L W ++ A+G+ Y
Sbjct: 82 CRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNY 134
Query: 466 IHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRIS 525
+ + R+ VH ++ + +L+ H I+ FG +LL K E G ++
Sbjct: 135 LED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE-------GGKVP 184
Query: 526 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLP-DAGPENDGKGLESLVRKA 583
++A E+ I +T + DV+S+G+ + E++T G P D P ++ + S++ K
Sbjct: 185 I---KWMALES-ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSILEKG 237
Query: 584 FRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTV 632
R +P ID + I C +D + RP+ R +
Sbjct: 238 ERLPQPPICTID---------------VYMIMRKCWMIDADSRPKFREL 271
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 100/247 (40%), Gaps = 37/247 (14%)
Query: 389 FKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLP 448
+ E+E+E + + HPNI+++ + ++ + G L + + + L
Sbjct: 64 MEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARG-KALS 122
Query: 449 WEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDEL-HPCIS--GFGLNRLLPG 505
++ + L Y H + VH ++K IL D H I FGL L
Sbjct: 123 EGYVAELMKQMMNALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELF-- 177
Query: 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
K++ T+ G+ + Y+APE ++ T KCD++S G+V+ +LTG LP
Sbjct: 178 -----KSDEHSTNAAGTAL------YMAPE--VFKRDVTFKCDIWSAGVVMYFLLTGCLP 224
Query: 566 DAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEF 625
G LE + +KA + + P + + +Q+L DPE
Sbjct: 225 FTGT-----SLEEVQQKATYKEPNYAVECRPLTPQAVDLLKQMLTK----------DPER 269
Query: 626 RPRMRTV 632
RP V
Sbjct: 270 RPSAAQV 276
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 98/223 (43%), Gaps = 29/223 (13%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
V K +G +V++ R + + R T + K E EV + + HPNI++
Sbjct: 42 VKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLE-EVAVLKLLDHPNIMK 100
Query: 410 LKAFYYANDEKLLISDFIRNGSLY-AALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHE 468
L F+ L+ + + G L+ +H + + +A + I Q G+ Y+H+
Sbjct: 101 LYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEV-----DAAVIIKQ-VLSGVTYLHK 154
Query: 469 YSPRKYVHGNIKSTKILLDDELHPC---ISGFGLNRLLPGTSKVTKNETIVTSGTGSRIS 525
++ VH ++K +LL+ + I FGL+ + K+ + GT
Sbjct: 155 HN---IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKER-----LGTA---- 202
Query: 526 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAG 568
Y+APE + K+ +KCDV+S G++L +L G P G
Sbjct: 203 ----YYIAPE--VLRKKYDEKCDVWSIGVILFILLAGYPPFGG 239
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 89/216 (41%), Gaps = 26/216 (12%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK K G +Y + + A V+ +L + + + EVE + ++HPNI+R
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR---REVEIQSHLRHPNILR 75
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEY 469
L +++ LI ++ G++Y L L + A L Y H
Sbjct: 76 LYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHS- 129
Query: 470 SPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISN 529
++ +H +IK +LL I+ FG + P + + T T+
Sbjct: 130 --KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL-------------- 173
Query: 530 VYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
YL PE I G +K D++S G++ E L G+ P
Sbjct: 174 DYLPPEM-IEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 103/236 (43%), Gaps = 39/236 (16%)
Query: 356 GIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYY 415
G KV + R G V + T+ + T K F EV + + HPNIV+L
Sbjct: 26 GNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVKLFEVIE 84
Query: 416 ANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTA--RGLMYIHEYSPRK 473
L+ ++ G ++ L A R+K + A R ++ +Y +K
Sbjct: 85 TEKTLYLVMEYASGGEVFDYLVA-----------HGRMKEKEARAKFRQIVSAVQYCHQK 133
Query: 474 Y-VHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAI--SNV 530
Y VH ++K+ +LLD +++ I+ FG + NE V G+++ S
Sbjct: 134 YIVHRDLKAENLLLDGDMNIKIADFGFS-----------NEFTV----GNKLDTFCGSPP 178
Query: 531 YLAPEARIYGSKFTQ-KCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR 585
Y APE G K+ + DV+S G++L +++G LP DG+ L+ L + R
Sbjct: 179 YAAPEL-FQGKKYDGPEVDVWSLGVILYTLVSGSLP-----FDGQNLKELRERVLR 228
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 89/216 (41%), Gaps = 26/216 (12%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK K G +Y + + A V+ +L + + + EVE + ++HPNI+R
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR---REVEIQSHLRHPNILR 77
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEY 469
L +++ LI ++ G++Y L L + A L Y H
Sbjct: 78 LYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHS- 131
Query: 470 SPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISN 529
++ +H +IK +LL I+ FG + P + + T T+
Sbjct: 132 --KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL-------------- 175
Query: 530 VYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
YL PE I G +K D++S G++ E L G+ P
Sbjct: 176 DYLPPEM-IEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 32/238 (13%)
Query: 335 FSLELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFES 394
F+++ D++R +GK K G +Y + + A V+ +L + + +
Sbjct: 11 FTIDDFDIVRP----LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLR---R 63
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHA-GPSDSLPPLPWEARL 453
E+E + ++HPNI+R+ +++ L+ +F G LY L G D +
Sbjct: 64 EIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDE------QRSA 117
Query: 454 KIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNE 513
+ A L Y HE RK +H +IK +L+ + I+ FG + P +
Sbjct: 118 TFMEELADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRR----- 169
Query: 514 TIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEN 571
R + YL PE I G +K D++ G++ E L G P P +
Sbjct: 170 ---------RXMCGTLDYLPPEM-IEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSH 217
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 89/216 (41%), Gaps = 26/216 (12%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK K G +Y + + A V+ +L + + + EVE + ++HPNI+R
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR---REVEIQSHLRHPNILR 75
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEY 469
L +++ LI ++ G++Y L L + A L Y H
Sbjct: 76 LYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHS- 129
Query: 470 SPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISN 529
++ +H +IK +LL I+ FG + P + + T T+
Sbjct: 130 --KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTL-------------- 173
Query: 530 VYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
YL PE I G +K D++S G++ E L G+ P
Sbjct: 174 DYLPPEM-IEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 80/171 (46%), Gaps = 22/171 (12%)
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLK 454
E++ + P IV +Y++ E + + + GSL L +P + K
Sbjct: 73 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-----IPEQILGK 127
Query: 455 IAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNET 514
++ +GL Y+ E K +H ++K + IL++ + FG++ L ++
Sbjct: 128 VSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI--------DS 177
Query: 515 IVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
+ S G+R Y++PE R+ G+ ++ + D++S G+ L+E+ GR P
Sbjct: 178 MANSFVGTR------SYMSPE-RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 221
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 118/275 (42%), Gaps = 42/275 (15%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRL-KAFYYANDEKLLISDFIRNGS 431
VAV+ L EG + SE++ + + H N+V L A ++I +F + G+
Sbjct: 61 TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGN 120
Query: 432 LYAALHAGPSDSLPPLP---------WEARLKIAQGTARGLMYIHEYSPRKYVHGNIKST 482
L L + ++ +P P E + + A+G+ ++ + RK +H ++ +
Sbjct: 121 LSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAAR 177
Query: 483 KILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSK 542
ILL ++ I FGL R + K+ V G + + ++APE I+
Sbjct: 178 NILLSEKNVVKICDFGLAR------DIXKDPDXVRKGD----ARLPLKWMAPET-IFDRV 226
Query: 543 FTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKE 601
+T + DV+SFG++L EI + G P G + D + L ++ R R P + P +
Sbjct: 227 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL-KEGTRMRAP--DYTTPEM--- 280
Query: 602 IHAKRQVLATFHIALNCTELDPEFRPRMRTVSESL 636
+ L+C +P RP + E L
Sbjct: 281 ----------YQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 99/232 (42%), Gaps = 38/232 (16%)
Query: 343 LRASAYVVGKSKN-GIMYKVVVGRGSGMGAPTVVAV---RRLTEGDATWRFKDFESEVEA 398
++ YV+G + G KV +G G V + +++ D + K E++
Sbjct: 8 VKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIK---REIQN 64
Query: 399 IARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL--YAALHAGPSDSLPPLPWEARLKIA 456
+ +HP+I++L + ++ +++ G L Y H + EAR ++
Sbjct: 65 LKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEE------MEAR-RLF 117
Query: 457 QGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIV 516
Q + Y H + VH ++K +LLD ++ I+ FGL+ ++
Sbjct: 118 QQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMM------------- 161
Query: 517 TSGTGSRISAISNVYLAPEA---RIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
+ G R S S Y APE R+Y + D++S G++L +L G LP
Sbjct: 162 SDGEFLRTSCGSPNYAAPEVISGRLYAGP---EVDIWSCGVILYALLCGTLP 210
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 96/224 (42%), Gaps = 37/224 (16%)
Query: 359 YKVVVGRGSGMGAPTVVAVRRLTEGD--------ATWRFKDFES---EVEAIARVQHPNI 407
Y +V G G + R+T+ + A+ + KD + EVE + ++ HPNI
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNI 83
Query: 408 VRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIH 467
++L + ++ + G L+ + S +I + G+ Y+H
Sbjct: 84 MKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA-----RIIKQVFSGITYMH 138
Query: 468 EYSPRKYVHGNIKSTKILLDDELHPC---ISGFGLNRLLPGTSKVTKNETIVTSGTGSRI 524
+++ VH ++K ILL+ + C I FGL+ +K+ RI
Sbjct: 139 KHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMK-----------DRI 184
Query: 525 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAG 568
+ Y+APE + + +KCDV+S G++L +L+G P G
Sbjct: 185 G--TAYYIAPE--VLRGTYDEKCDVWSAGVILYILLSGTPPFYG 224
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 96/224 (42%), Gaps = 37/224 (16%)
Query: 359 YKVVVGRGSGMGAPTVVAVRRLTEGD--------ATWRFKDFES---EVEAIARVQHPNI 407
Y +V G G + R+T+ + A+ + KD + EVE + ++ HPNI
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNI 83
Query: 408 VRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIH 467
++L + ++ + G L+ + S +I + G+ Y+H
Sbjct: 84 MKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA-----RIIKQVFSGITYMH 138
Query: 468 EYSPRKYVHGNIKSTKILLDDELHPC---ISGFGLNRLLPGTSKVTKNETIVTSGTGSRI 524
+++ VH ++K ILL+ + C I FGL+ +K+ RI
Sbjct: 139 KHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMK-----------DRI 184
Query: 525 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAG 568
+ Y+APE + + +KCDV+S G++L +L+G P G
Sbjct: 185 G--TAYYIAPE--VLRGTYDEKCDVWSAGVILYILLSGTPPFYG 224
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 99/231 (42%), Gaps = 37/231 (16%)
Query: 360 KVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDE 419
KV + R G + + T+ + T K F EV + + HPNIV+L
Sbjct: 27 KVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVKLFEVIETEKT 85
Query: 420 KLLISDFIRNGSL--YAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHG 477
LI ++ G + Y H + EAR K Q + Y H+ ++ VH
Sbjct: 86 LYLIMEYASGGEVFDYLVAHGRMKEK------EARSKFRQ-IVSAVQYCHQ---KRIVHR 135
Query: 478 NIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAI--SNVYLAPE 535
++K+ +LLD +++ I+ FG + NE V G ++ S Y APE
Sbjct: 136 DLKAENLLLDADMNIKIADFGFS-----------NEFTV----GGKLDTFCGSPPYAAPE 180
Query: 536 ARIYGSKFTQ-KCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR 585
G K+ + DV+S G++L +++G LP DG+ L+ L + R
Sbjct: 181 L-FQGKKYDGPEVDVWSLGVILYTLVSGSLP-----FDGQNLKELRERVLR 225
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 89/216 (41%), Gaps = 26/216 (12%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK K G +Y + + A V+ +L + + + EVE + ++HPNI+R
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR---REVEIQSHLRHPNILR 71
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEY 469
L +++ LI ++ G++Y L L + A L Y H
Sbjct: 72 LYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHS- 125
Query: 470 SPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISN 529
++ +H +IK +LL I+ FG + P + + T T+
Sbjct: 126 --KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL-------------- 169
Query: 530 VYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
YL PE I G +K D++S G++ E L G+ P
Sbjct: 170 DYLPPEM-IEGRMHDEKVDLWSLGVLCYEFLVGKPP 204
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 99/231 (42%), Gaps = 37/231 (16%)
Query: 360 KVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDE 419
KV + R G V + T+ +++ K F EV + + HPNIV+L
Sbjct: 29 KVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFEVIETEKT 87
Query: 420 KLLISDFIRNGSL--YAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHG 477
L+ ++ G + Y H + EAR K Q + Y H+ + VH
Sbjct: 88 LYLVMEYASGGEVFDYLVAHGRMKEK------EARAKFRQ-IVSAVQYCHQ---KFIVHR 137
Query: 478 NIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNV--YLAPE 535
++K+ +LLD +++ I+ FG + NE G+++ A Y APE
Sbjct: 138 DLKAENLLLDADMNIKIADFGFS-----------NEFTF----GNKLDAFCGAPPYAAPE 182
Query: 536 ARIYGSKFTQ-KCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR 585
G K+ + DV+S G++L +++G LP DG+ L+ L + R
Sbjct: 183 L-FQGKKYDGPEVDVWSLGVILYTLVSGSLP-----FDGQNLKELRERVLR 227
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 49/104 (47%), Gaps = 8/104 (7%)
Query: 104 PIPANLFNATNLVYLDLAH----NSFCGPIPDRIKTLKNLTHXXXXXXXXXXXXPEFLLD 159
PIP++L NL YL+ + N+ GPIP I L L + P+FL
Sbjct: 67 PIPSSL---ANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQ 123
Query: 160 LRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIP 203
++ L TL+ S+N SG +P P +V + N +SG IP
Sbjct: 124 IKTLV-TLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIP 166
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 49/108 (45%), Gaps = 2/108 (1%)
Query: 104 PIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHXXXXXXXXXXXXPEFLLDLRAL 163
PIP + T L YL + H + G IPD + +K L P + L L
Sbjct: 92 PIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNL 151
Query: 164 TGTLNLSFNQFSGQIPEMYGHFP-VMVSLDLRNNNLSGEIPQVGSLLN 210
G + N+ SG IP+ YG F + S+ + N L+G+IP + LN
Sbjct: 152 VG-ITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN 198
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%)
Query: 167 LNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGLCGFP 226
L+L N+ G +P+ + SL++ NNL GEIPQ G+L +A++ N LCG P
Sbjct: 249 LDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSP 308
Query: 227 L 227
L
Sbjct: 309 L 309
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 54/155 (34%), Gaps = 23/155 (14%)
Query: 75 RNLTGYMPXXXXXXXXXXXXXXXXXXFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIK 134
NL G +P S IP L LV LD ++N+ G +P I
Sbjct: 87 NNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSIS 146
Query: 135 TLKNLTHXXXXXXXXXXXXPEFLLDLRALTGTLNLSFNQFSGQIPEMY------------ 182
+L NL P+ L ++ +S N+ +G+IP +
Sbjct: 147 SLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSR 206
Query: 183 ----GHFPVMVSLD-------LRNNNLSGEIPQVG 206
G V+ D L N+L+ ++ +VG
Sbjct: 207 NMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVG 241
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 89/216 (41%), Gaps = 26/216 (12%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK K G +Y + + A V+ +L + + + EVE + ++HPNI+R
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR---REVEIQSHLRHPNILR 76
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEY 469
L +++ LI ++ G++Y L L + A L Y H
Sbjct: 77 LYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHS- 130
Query: 470 SPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISN 529
++ +H +IK +LL I+ FG + P + + T T+
Sbjct: 131 --KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL-------------- 174
Query: 530 VYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
YL PE I G +K D++S G++ E L G+ P
Sbjct: 175 DYLPPEM-IEGRMHDEKVDLWSLGVLCYEFLVGKPP 209
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 87/196 (44%), Gaps = 19/196 (9%)
Query: 371 APTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNG 430
A T VAV+ + E + +F +E + ++VRL L++ + + +G
Sbjct: 47 AETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHG 106
Query: 431 SLYAAL-----HAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKIL 485
L + L A + PP + +++A A G+ Y++ +K+VH N+ + +
Sbjct: 107 DLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRNLAARNCM 163
Query: 486 LDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQ 545
+ + I FG+ R + T K G G + ++APE+ G FT
Sbjct: 164 VAHDFTVKIGDFGMTRDIYETDYYRK------GGKG----LLPVRWMAPESLKDGV-FTT 212
Query: 546 KCDVYSFGIVLLEILT 561
D++SFG+VL EI +
Sbjct: 213 SSDMWSFGVVLWEITS 228
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 118/272 (43%), Gaps = 40/272 (14%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRL-KAFYYANDEKLLISDFIRNGSL 432
VAV+ L EG + SE++ + + H N+V L A ++I +F + G+L
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 433 YAALHAGPSDSLPP-------LPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKIL 485
L + ++ +P L E + + A+G+ ++ + RK +H ++ + IL
Sbjct: 120 STYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNIL 176
Query: 486 LDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQ 545
L ++ I FGL R + K+ V G + + ++APE I+ +T
Sbjct: 177 LSEKNVVKIXDFGLAR------DIYKDPDYVRKGD----ARLPLKWMAPET-IFDRVYTI 225
Query: 546 KCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHA 604
+ DV+SFG++L EI + G P G + D + L ++ R R P + P +
Sbjct: 226 QSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXRRL-KEGTRMRAP--DYTTPEM------ 276
Query: 605 KRQVLATFHIALNCTELDPEFRPRMRTVSESL 636
+ L+C +P RP + E L
Sbjct: 277 -------YQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 98/231 (42%), Gaps = 37/231 (16%)
Query: 360 KVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDE 419
KV + R G V + T+ +++ K F EV + + HPNIV+L
Sbjct: 22 KVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFEVIETEKT 80
Query: 420 KLLISDFIRNGSLYAALHAGPSDSLPPLPW----EARLKIAQGTARGLMYIHEYSPRKYV 475
L+ ++ G ++ D L W EAR K Q + Y H+ + V
Sbjct: 81 LYLVMEYASGGEVF--------DYLVAHGWMKEKEARAKFRQ-IVSAVQYCHQ---KFIV 128
Query: 476 HGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPE 535
H ++K+ +LLD +++ I+ FG + NE T G S Y APE
Sbjct: 129 HRDLKAENLLLDADMNIKIADFGFS-----------NE--FTFGNKLDTFCGSPPYAAPE 175
Query: 536 ARIYGSKFTQ-KCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR 585
G K+ + DV+S G++L +++G LP DG+ L+ L + R
Sbjct: 176 L-FQGKKYDGPEVDVWSLGVILYTLVSGSLP-----FDGQNLKELRERVLR 220
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 90/223 (40%), Gaps = 28/223 (12%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK K G +Y + + A V+ +L + + + E+E + ++HPNI+R
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLR---REIEIQSHLRHPNILR 79
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHA-GPSDSLPPLPWEARLKIAQGTARGLMYIHE 468
+ +++ L+ +F G LY L G D + + A L Y HE
Sbjct: 80 MYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDE------QRSATFMEELADALHYCHE 133
Query: 469 YSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAIS 528
RK +H +IK +L+ + I+ FG + P + R +
Sbjct: 134 ---RKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRR--------------RXMCGT 176
Query: 529 NVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEN 571
YL PE I G +K D++ G++ E L G P P +
Sbjct: 177 LDYLPPEM-IEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSH 218
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 87/196 (44%), Gaps = 19/196 (9%)
Query: 371 APTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNG 430
A T VAV+ + E + +F +E + ++VRL L++ + + +G
Sbjct: 46 AETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHG 105
Query: 431 SLYAAL-----HAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKIL 485
L + L A + PP + +++A A G+ Y++ +K+VH N+ + +
Sbjct: 106 DLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRNLAARNCM 162
Query: 486 LDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQ 545
+ + I FG+ R + T K G G + ++APE+ G FT
Sbjct: 163 VAHDFTVKIGDFGMTRDIYETDYYRK------GGKG----LLPVRWMAPESLKDGV-FTT 211
Query: 546 KCDVYSFGIVLLEILT 561
D++SFG+VL EI +
Sbjct: 212 SSDMWSFGVVLWEITS 227
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 89/216 (41%), Gaps = 26/216 (12%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK K G +Y + + A V+ +L + + + EVE + ++HPNI+R
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR---REVEIQSHLRHPNILR 75
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEY 469
L +++ LI ++ G++Y L L + A L Y H
Sbjct: 76 LYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHS- 129
Query: 470 SPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISN 529
++ +H +IK +LL I+ FG + P + + T T+
Sbjct: 130 --KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL-------------- 173
Query: 530 VYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
YL PE I G +K D++S G++ E L G+ P
Sbjct: 174 DYLPPEM-IEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 118/272 (43%), Gaps = 40/272 (14%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRL-KAFYYANDEKLLISDFIRNGSL 432
VAV+ L EG + SE++ + + H N+V L A ++I +F + G+L
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 433 YAALHAGPSDSLPP-------LPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKIL 485
L + ++ +P L E + + A+G+ ++ + RK +H ++ + IL
Sbjct: 120 STYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKXIHRDLAARNIL 176
Query: 486 LDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQ 545
L ++ I FGL R + K+ V G + + ++APE I+ +T
Sbjct: 177 LSEKNVVKICDFGLAR------DIYKDPDYVRKGD----ARLPLKWMAPET-IFDRVYTI 225
Query: 546 KCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHA 604
+ DV+SFG++L EI + G P G + D + L ++ R R P + P +
Sbjct: 226 QSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL-KEGTRMRAP--DYTTPEM------ 276
Query: 605 KRQVLATFHIALNCTELDPEFRPRMRTVSESL 636
+ L+C +P RP + E L
Sbjct: 277 -------YQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 90/223 (40%), Gaps = 28/223 (12%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK K G +Y + + A V+ +L + + + E+E + ++HPNI+R
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLR---REIEIQSHLRHPNILR 78
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHA-GPSDSLPPLPWEARLKIAQGTARGLMYIHE 468
+ +++ L+ +F G LY L G D + + A L Y HE
Sbjct: 79 MYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDE------QRSATFMEELADALHYCHE 132
Query: 469 YSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAIS 528
RK +H +IK +L+ + I+ FG + P + R +
Sbjct: 133 ---RKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRR--------------RXMCGT 175
Query: 529 NVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEN 571
YL PE I G +K D++ G++ E L G P P +
Sbjct: 176 LDYLPPEM-IEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSH 217
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 114/276 (41%), Gaps = 31/276 (11%)
Query: 370 GAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYY-ANDEKL-LISDFI 427
G +VAV+ L ++ E++ + + H +I++ K A L L+ +++
Sbjct: 58 GTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYV 117
Query: 428 RNGSLYAALHAGPSDSLP--PLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKIL 485
GSL D LP + L AQ G+ Y+H + Y+H ++ + +L
Sbjct: 118 PLGSL--------RDYLPRHSIGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVL 166
Query: 486 LDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQ 545
LD++ I FGL + +P + + V S + + APE + KF
Sbjct: 167 LDNDRLVKIGDFGLAKAVPEGHEXYR----VREDGDSPV-----FWYAPEC-LKEYKFYY 216
Query: 546 KCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPA--LVKEIH 603
DV+SFG+ L E+LT P L + + R L+E+++ L +
Sbjct: 217 ASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLR-LTELLERGERLPRPDK 275
Query: 604 AKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 639
+V +H+ NC E + FRP + L V
Sbjct: 276 CPAEV---YHLMKNCWETEASFRPTFENLIPILKTV 308
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 87/196 (44%), Gaps = 19/196 (9%)
Query: 371 APTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNG 430
A T VAV+ + E + +F +E + ++VRL L++ + + +G
Sbjct: 43 AETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHG 102
Query: 431 SLYAAL-----HAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKIL 485
L + L A + PP + +++A A G+ Y++ +K+VH ++ + +
Sbjct: 103 DLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCM 159
Query: 486 LDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQ 545
+ + I FG+ R + T K G G + ++APE+ G FT
Sbjct: 160 VAHDFTVKIGDFGMTRDIXETDXXRKG------GKG----LLPVRWMAPESLKDGV-FTT 208
Query: 546 KCDVYSFGIVLLEILT 561
D++SFG+VL EI +
Sbjct: 209 SSDMWSFGVVLWEITS 224
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 106/257 (41%), Gaps = 56/257 (21%)
Query: 340 EDLLRASAYVVGKSKNG--IMYKVVVGRGS------GMGAPTVVAV-------RRLTEGD 384
+D+ VG S +G + + + +GRGS G+ T V V R+LT+ +
Sbjct: 9 DDIEELETKAVGXSNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSE 68
Query: 385 ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKL-------LISDFIRNGSLYAALH 437
RFK+ E E + +QHPNIVR FY + + + L+++ +G+L L
Sbjct: 69 RQ-RFKE---EAEXLKGLQHPNIVR---FYDSWESTVKGKKCIVLVTELXTSGTLKTYLK 121
Query: 438 AGPSDSLPPL-PWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISG 496
+ L W + +GL ++H +P +H ++K I I+G
Sbjct: 122 RFKVXKIKVLRSW------CRQILKGLQFLHTRTP-PIIHRDLKCDNIF--------ITG 166
Query: 497 FGLNRLLPGTSKVTKNETIVTSGTGSRISAISNV--YLAPEARIYGSKFTQKCDVYSFGI 554
P S + + T S A+ + APE Y K+ + DVY+FG
Sbjct: 167 -------PTGSVKIGDLGLATLKRASFAKAVIGTPEFXAPEX--YEEKYDESVDVYAFGX 217
Query: 555 VLLEILTGRLPDAGPEN 571
LE T P + +N
Sbjct: 218 CXLEXATSEYPYSECQN 234
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 87/196 (44%), Gaps = 19/196 (9%)
Query: 371 APTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNG 430
A T VAV+ + E + +F +E + ++VRL L++ + + +G
Sbjct: 46 AETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHG 105
Query: 431 SLYAAL-----HAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKIL 485
L + L A + PP + +++A A G+ Y++ +K+VH ++ + +
Sbjct: 106 DLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCM 162
Query: 486 LDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQ 545
+ + I FG+ R + T K G G + ++APE+ G FT
Sbjct: 163 VAHDFTVKIGDFGMTRDIXETDXXRKG------GKG----LLPVRWMAPESLKDGV-FTT 211
Query: 546 KCDVYSFGIVLLEILT 561
D++SFG+VL EI +
Sbjct: 212 SSDMWSFGVVLWEITS 227
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 107/238 (44%), Gaps = 29/238 (12%)
Query: 341 DLLRASAYVV-GKSKNGIMYKVVVGRG-----------SGMGAPTVVAVRRLTEGDATWR 388
+L++A +VV G S + + V+GRG G AV+ L
Sbjct: 14 ELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE 73
Query: 389 FKDFESEVEAIARVQHPNIVRLKAFYYAND-EKLLISDFIRNGSLYAALHAGPSDSLPPL 447
F +E + HPN++ L ++ L++ ++++G L + + P +
Sbjct: 74 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PTV 131
Query: 448 PWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTS 507
+ + A+G+ Y+ + +K+VH ++ + +LD++ ++ FGL R
Sbjct: 132 --KDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-----D 181
Query: 508 KVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
K V + TG+++ ++A E+ + KFT K DV+SFG++L E++T P
Sbjct: 182 MYDKEXXSVHNKTGAKLPV---KWMALES-LQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 72/171 (42%), Gaps = 23/171 (13%)
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLK 454
EVE + ++HPNI+RL +++ + LI ++ G++Y L L +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYREL-----QKLSKFDEQRTAT 112
Query: 455 IAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNET 514
A L Y H +K +H +IK +LL I+ FG + P + + T
Sbjct: 113 YITELANALSYCHS---KKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGT 169
Query: 515 IVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
+ YL PE I G +K D++S G++ E L G+ P
Sbjct: 170 L--------------DYLPPEM-IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 87/196 (44%), Gaps = 19/196 (9%)
Query: 371 APTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNG 430
A T VAV+ + E + +F +E + ++VRL L++ + + +G
Sbjct: 46 AETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHG 105
Query: 431 SLYAAL-----HAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKIL 485
L + L A + PP + +++A A G+ Y++ +K+VH ++ + +
Sbjct: 106 DLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCM 162
Query: 486 LDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQ 545
+ + I FG+ R + T K G G + ++APE+ G FT
Sbjct: 163 VAHDFTVKIGDFGMTRDIXETDXXRK------GGKG----LLPVRWMAPESLKDGV-FTT 211
Query: 546 KCDVYSFGIVLLEILT 561
D++SFG+VL EI +
Sbjct: 212 SSDMWSFGVVLWEITS 227
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 87/216 (40%), Gaps = 26/216 (12%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK K G +Y + + A V+ +L + + + EVE + ++HPNI+R
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR---REVEIQSHLRHPNILR 77
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEY 469
L +++ LI ++ G +Y L L + A L Y H
Sbjct: 78 LYGYFHDATRVYLILEYAPRGEVYKEL-----QKLSKFDEQRTATYITELANALSYCHS- 131
Query: 470 SPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISN 529
++ +H +IK +LL I+ FG + P + + T+
Sbjct: 132 --KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLXGTL-------------- 175
Query: 530 VYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
YL PE I G +K D++S G++ E L G+ P
Sbjct: 176 DYLPPEM-IEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 100/214 (46%), Gaps = 37/214 (17%)
Query: 359 YKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ-HPNIVRLKAFYYAN 417
Y V + +G G+ + V+ L E AT + EV+ + +V HPNI++LK Y N
Sbjct: 32 YAVKIIDVTGGGSFSAEEVQELRE--ATLK------EVDILRKVSGHPNIIQLKDTYETN 83
Query: 418 DEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHG 477
L+ D ++ G L+ L ++ + E R KI + + +H+ + VH
Sbjct: 84 TFFFLVFDLMKKGELFDYL----TEKVTLSEKETR-KIMRALLEVICALHKLN---IVHR 135
Query: 478 NIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEAR 537
++K ILLDD+++ ++ FG + L K+ + GT S YLAPE
Sbjct: 136 DLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRE-----VCGTPS--------YLAPEI- 181
Query: 538 IYGSK------FTQKCDVYSFGIVLLEILTGRLP 565
I S + ++ D++S G+++ +L G P
Sbjct: 182 IECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 215
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 99/232 (42%), Gaps = 38/232 (16%)
Query: 343 LRASAYVVGKSKN-GIMYKVVVGRGSGMGAPTVVAV---RRLTEGDATWRFKDFESEVEA 398
++ YV+G + G KV +G G V + +++ D + K E++
Sbjct: 8 VKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIK---REIQN 64
Query: 399 IARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL--YAALHAGPSDSLPPLPWEARLKIA 456
+ +HP+I++L + ++ +++ G L Y H + EAR ++
Sbjct: 65 LKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEE------MEAR-RLF 117
Query: 457 QGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIV 516
Q + Y H + VH ++K +LLD ++ I+ FGL+ ++
Sbjct: 118 QQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMM------------- 161
Query: 517 TSGTGSRISAISNVYLAPEA---RIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
+ G R S S Y APE R+Y + D++S G++L +L G LP
Sbjct: 162 SDGEFLRDSCGSPNYAAPEVISGRLYAGP---EVDIWSCGVILYALLCGTLP 210
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 100/214 (46%), Gaps = 37/214 (17%)
Query: 359 YKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ-HPNIVRLKAFYYAN 417
Y V + +G G+ + V+ L E AT + EV+ + +V HPNI++LK Y N
Sbjct: 45 YAVKIIDVTGGGSFSAEEVQELRE--ATLK------EVDILRKVSGHPNIIQLKDTYETN 96
Query: 418 DEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHG 477
L+ D ++ G L+ L ++ + E R KI + + +H+ + VH
Sbjct: 97 TFFFLVFDLMKKGELFDYL----TEKVTLSEKETR-KIMRALLEVICALHKLN---IVHR 148
Query: 478 NIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEAR 537
++K ILLDD+++ ++ FG + L K+ + GT S YLAPE
Sbjct: 149 DLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRE-----VCGTPS--------YLAPEI- 194
Query: 538 IYGSK------FTQKCDVYSFGIVLLEILTGRLP 565
I S + ++ D++S G+++ +L G P
Sbjct: 195 IECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 89/216 (41%), Gaps = 26/216 (12%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK K G +Y + + A V+ +L + + + EVE + ++HPNI+R
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR---REVEIQSHLRHPNILR 73
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEY 469
L +++ LI ++ G++Y L L + A L Y H
Sbjct: 74 LYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTATYITELANALSYCHS- 127
Query: 470 SPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISN 529
++ +H +IK +LL I+ FG + P + + T T+
Sbjct: 128 --KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLCGTL-------------- 171
Query: 530 VYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
YL PE I G +K D++S G++ E L G+ P
Sbjct: 172 DYLPPEM-IEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 97/229 (42%), Gaps = 33/229 (14%)
Query: 360 KVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDE 419
KV + R G V + T+ +++ K F EV + + HPNIV+L
Sbjct: 29 KVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFEVIETEKT 87
Query: 420 KLLISDFIRNGSL--YAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHG 477
L+ ++ G + Y H + EAR K Q + Y H+ + VH
Sbjct: 88 LYLVMEYASGGEVFDYLVAHGRMKEK------EARAKFRQ-IVSAVQYCHQ---KFIVHR 137
Query: 478 NIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEAR 537
++K+ +LLD +++ I+ FG + NE T G S Y APE
Sbjct: 138 DLKAENLLLDADMNIKIADFGFS-----------NE--FTFGNKLDTFCGSPPYAAPEL- 183
Query: 538 IYGSKFTQ-KCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR 585
G K+ + DV+S G++L +++G LP DG+ L+ L + R
Sbjct: 184 FQGKKYDGPEVDVWSLGVILYTLVSGSLP-----FDGQNLKELRERVLR 227
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 97/229 (42%), Gaps = 33/229 (14%)
Query: 360 KVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDE 419
KV + R G V + T+ +++ K F EV + + HPNIV+L
Sbjct: 29 KVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFEVIETEKT 87
Query: 420 KLLISDFIRNGSL--YAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHG 477
L+ ++ G + Y H + EAR K Q + Y H+ + VH
Sbjct: 88 LYLVMEYASGGEVFDYLVAHGRMKEK------EARAKFRQ-IVSAVQYCHQ---KFIVHR 137
Query: 478 NIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEAR 537
++K+ +LLD +++ I+ FG + NE T G S Y APE
Sbjct: 138 DLKAENLLLDADMNIKIADFGFS-----------NE--FTFGNKLDTFCGSPPYAAPEL- 183
Query: 538 IYGSKFTQ-KCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR 585
G K+ + DV+S G++L +++G LP DG+ L+ L + R
Sbjct: 184 FQGKKYDGPEVDVWSLGVILYTLVSGSLP-----FDGQNLKELRERVLR 227
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 118/277 (42%), Gaps = 44/277 (15%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRL-KAFYYANDEKLLISDFIRNGS 431
VAV+ L EG + SE++ + + H N+V L A ++I++F + G+
Sbjct: 50 TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGN 109
Query: 432 LYAALHAGPSDSLPP-----------LPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIK 480
L L + ++ +P L E + + A+G+ ++ + RK +H ++
Sbjct: 110 LSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLA 166
Query: 481 STKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYG 540
+ ILL ++ I FGL R + K+ V G + ++APE I+
Sbjct: 167 ARNILLSEKNVVKICDFGLAR------DIXKDPDXVRKGDAR----LPLKWMAPET-IFD 215
Query: 541 SKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALV 599
+T + DV+SFG++L EI + G P G + D + L ++ R R P + P +
Sbjct: 216 RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL-KEGTRMRAP--DYTTPEM- 271
Query: 600 KEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESL 636
+ L+C +P RP + E L
Sbjct: 272 ------------YQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 72/171 (42%), Gaps = 23/171 (13%)
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLK 454
EVE + ++HPNI+RL +++ LI ++ G++Y L L +
Sbjct: 55 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTAT 109
Query: 455 IAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNET 514
A L Y H ++ +H +IK +LL I+ FG + P + + T T
Sbjct: 110 YITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGT 166
Query: 515 IVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
+ YL PE I G +K D++S G++ E L G+ P
Sbjct: 167 L--------------DYLPPEM-IEGRMHDEKVDLWSLGVLCYEFLVGKPP 202
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 118/291 (40%), Gaps = 40/291 (13%)
Query: 356 GIMYKVVVGRGSGMG---APTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLK 411
G KVV G+G A VAV+ L + SE++ ++ + QH NIV L
Sbjct: 49 GAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLL 108
Query: 412 AFYYANDEKLLISDFIRNGSLYAALHAGPSDSLP-----PLPWEARLKIAQGTARGLMYI 466
L+I+++ G L L L PL L + A+G+ ++
Sbjct: 109 GACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFL 168
Query: 467 HEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISA 526
+ + +H ++ + +LL + I FGL R + + + G
Sbjct: 169 ---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR------DIMNDSNYIVKGNAR---- 215
Query: 527 ISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFR 585
+ ++APE+ I+ +T + DV+S+GI+L EI + G P G + K LV+ ++
Sbjct: 216 LPVKWMAPES-IFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK-FYKLVKDGYQ 273
Query: 586 ERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESL 636
+P P K I++ Q C L+P RP + + L
Sbjct: 274 MAQP---AFAP---KNIYSIMQA---------CWALEPTHRPTFQQICSFL 309
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 119/277 (42%), Gaps = 44/277 (15%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRL-KAFYYANDEKLLISDFIRNGS 431
VAV+ L EG + SE++ + + H N+V L A ++I++F + G+
Sbjct: 50 TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGN 109
Query: 432 LYAALHAGPSDSLPP-----------LPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIK 480
L L + ++ +P L E + + A+G+ ++ + RK +H ++
Sbjct: 110 LSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLA 166
Query: 481 STKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYG 540
+ ILL ++ I FGL R + K+ V G + + ++APE I+
Sbjct: 167 ARNILLSEKNVVKICDFGLAR------DIYKDPDYVRKGD----ARLPLKWMAPET-IFD 215
Query: 541 SKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALV 599
+T + DV+SFG++L EI + G P G + D + L ++ R R P + P +
Sbjct: 216 RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL-KEGTRMRAP--DYTTPEM- 271
Query: 600 KEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESL 636
+ L+C +P RP + E L
Sbjct: 272 ------------YQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 118/277 (42%), Gaps = 44/277 (15%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRL-KAFYYANDEKLLISDFIRNGS 431
VAV+ L EG + SE++ + + H N+V L A ++I++F + G+
Sbjct: 50 TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGN 109
Query: 432 LYAALHAGPSDSLPP-----------LPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIK 480
L L + ++ +P L E + + A+G+ ++ + RK +H ++
Sbjct: 110 LSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLA 166
Query: 481 STKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYG 540
+ ILL ++ I FGL R + K+ V G + ++APE I+
Sbjct: 167 ARNILLSEKNVVKICDFGLAR------DIYKDPDYVRKGDAR----LPLKWMAPET-IFD 215
Query: 541 SKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALV 599
+T + DV+SFG++L EI + G P G + D + L ++ R R P + P +
Sbjct: 216 RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL-KEGTRMRAP--DYTTPEM- 271
Query: 600 KEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESL 636
+ L+C +P RP + E L
Sbjct: 272 ------------YQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 99/214 (46%), Gaps = 37/214 (17%)
Query: 359 YKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ-HPNIVRLKAFYYAN 417
Y V + +G G+ + V+ L E AT + EV+ + +V HPNI++LK Y N
Sbjct: 45 YAVKIIDVTGGGSFSAEEVQELRE--ATLK------EVDILRKVSGHPNIIQLKDTYETN 96
Query: 418 DEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHG 477
L+ D ++ G L+ L ++ + E R KI + + +H+ + VH
Sbjct: 97 TFFFLVFDLMKKGELFDYL----TEKVTLSEKETR-KIMRALLEVICALHKLN---IVHR 148
Query: 478 NIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEAR 537
++K ILLDD+++ ++ FG + L K+ GT S YLAPE
Sbjct: 149 DLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRS-----VCGTPS--------YLAPEI- 194
Query: 538 IYGSK------FTQKCDVYSFGIVLLEILTGRLP 565
I S + ++ D++S G+++ +L G P
Sbjct: 195 IECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 124/303 (40%), Gaps = 51/303 (16%)
Query: 356 GIMYKVVVGRGSGMGA-----PTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVR 409
G +VV+ G+ VAV+ L + D SE+E + + +H NI+
Sbjct: 46 GAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIN 105
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHA------GPSDSLPPLPWEAR-----LKIAQG 458
L + +I ++ G+L L A S + +P E +
Sbjct: 106 LLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQ 165
Query: 459 TARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTS 518
ARG+ Y+ + +K +H ++ + +L+ + I+ FGL R + K
Sbjct: 166 LARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKT------ 216
Query: 519 GTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAG-PENDGKGL 576
T R+ ++APEA ++ +T + DV+SFG+++ EI T G P G P + L
Sbjct: 217 -TNGRLPV---KWMAPEA-LFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE---L 268
Query: 577 ESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESL 636
L+++ R +P + E+ + + +C P RP + + E L
Sbjct: 269 FKLLKEGHRMDKPAN------CTNEL---------YMMMRDCWHAVPSQRPTFKQLVEDL 313
Query: 637 DRV 639
DR+
Sbjct: 314 DRI 316
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 96/218 (44%), Gaps = 21/218 (9%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAP-TVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
+G+ G++Y+ V +G P T VA++ + E + +F +E + ++V
Sbjct: 18 LGQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 76
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDS-----LPPLPWEARLKIAQGTARGL 463
RL L+I + + G L + L + + L P +++A A G+
Sbjct: 77 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 136
Query: 464 MYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSR 523
Y++ K+VH ++ + ++ ++ I FG+ R + T K G G
Sbjct: 137 AYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKG------GKG-- 185
Query: 524 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT 561
+ +++PE+ G FT DV+SFG+VL EI T
Sbjct: 186 --LLPVRWMSPESLKDGV-FTTYSDVWSFGVVLWEIAT 220
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 97/229 (42%), Gaps = 33/229 (14%)
Query: 360 KVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDE 419
KV + R G V + T+ +++ K F EV + + HPNIV+L
Sbjct: 29 KVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFEVIETEKT 87
Query: 420 KLLISDFIRNGSL--YAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHG 477
L+ ++ G + Y H + EAR K Q + Y H+ + VH
Sbjct: 88 LYLVMEYASGGEVFDYLVAHGRMKEK------EARAKFRQ-IVSAVQYCHQ---KFIVHR 137
Query: 478 NIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEAR 537
++K+ +LLD +++ I+ FG + NE T G S Y APE
Sbjct: 138 DLKAENLLLDADMNIKIADFGFS-----------NE--FTFGNKLDTFCGSPPYAAPEL- 183
Query: 538 IYGSKFTQ-KCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR 585
G K+ + DV+S G++L +++G LP DG+ L+ L + R
Sbjct: 184 FQGKKYDGPEVDVWSLGVILYTLVSGSLP-----FDGQNLKELRERVLR 227
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 107/238 (44%), Gaps = 29/238 (12%)
Query: 341 DLLRASAYVV-GKSKNGIMYKVVVGRG-----------SGMGAPTVVAVRRLTEGDATWR 388
+L++A +VV G S + + V+GRG G AV+ L
Sbjct: 15 ELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE 74
Query: 389 FKDFESEVEAIARVQHPNIVRLKAFYYAND-EKLLISDFIRNGSLYAALHAGPSDSLPPL 447
F +E + HPN++ L ++ L++ ++++G L + + P +
Sbjct: 75 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PTV 132
Query: 448 PWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTS 507
+ + A+G+ Y+ + +K+VH ++ + +LD++ ++ FGL R
Sbjct: 133 --KDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-----D 182
Query: 508 KVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
K V + TG+++ ++A E+ + KFT K DV+SFG++L E++T P
Sbjct: 183 MYDKEYYSVHNKTGAKLPV---KWMALES-LQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 88/216 (40%), Gaps = 26/216 (12%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK K G +Y + + A V+ +L + + + EVE + ++HPNI+R
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR---REVEIQSHLRHPNILR 72
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEY 469
L +++ LI ++ G++Y L L + A L Y H
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHS- 126
Query: 470 SPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISN 529
++ +H +IK +LL I+ FG + P + + T+
Sbjct: 127 --KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELCGTL-------------- 170
Query: 530 VYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
YL PE I G +K D++S G++ E L G+ P
Sbjct: 171 DYLPPEM-IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 118/276 (42%), Gaps = 43/276 (15%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRL-KAFYYANDEKLLISDFIRNGS 431
VAV+ L EG + SE++ + + H N+V L A ++I +F + G+
Sbjct: 60 TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGN 119
Query: 432 LYAALHAGPSDSLPP----------LPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKS 481
L L + ++ +P L E + + A+G+ ++ + RK +H ++ +
Sbjct: 120 LSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAA 176
Query: 482 TKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGS 541
ILL ++ I FGL R + K+ V G + + ++APE I+
Sbjct: 177 RNILLSEKNVVKICDFGLAR------DIXKDPDXVRKGD----ARLPLKWMAPET-IFDR 225
Query: 542 KFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVK 600
+T + DV+SFG++L EI + G P G + D + L ++ R R P + P +
Sbjct: 226 VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL-KEGTRMRAP--DYTTPEM-- 280
Query: 601 EIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESL 636
+ L+C +P RP + E L
Sbjct: 281 -----------YQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 100/219 (45%), Gaps = 30/219 (13%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRL-TEGDATWRFKDFESEVEAIARVQHPNIV 408
+G+ G +YK + + +G +VA++++ E D ++ E+ + + P++V
Sbjct: 37 LGEGSYGSVYKAI-HKETGQ----IVAIKQVPVESD----LQEIIKEISIMQQCDSPHVV 87
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHE 468
+ Y+ N + ++ ++ GS+ + L + I Q T +GL Y+H
Sbjct: 88 KYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKT----LTEDEIATILQSTLKGLEYLHF 143
Query: 469 YSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAIS 528
+ +H +IK+ ILL+ E H ++ FG+ L T + K ++ GT
Sbjct: 144 M---RKIHRDIKAGNILLNTEGHAKLADFGVAGQL--TDXMAKRNXVI--GTP------- 189
Query: 529 NVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDA 567
++APE I + D++S GI +E+ G+ P A
Sbjct: 190 -FWMAPEV-IQEIGYNCVADIWSLGITAIEMAEGKPPYA 226
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 88/216 (40%), Gaps = 26/216 (12%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK K G +Y + + A V+ +L + + + EVE + ++HPNI+R
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR---REVEIQSHLRHPNILR 75
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEY 469
L +++ LI ++ G++Y L L + A L Y H
Sbjct: 76 LYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHS- 129
Query: 470 SPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISN 529
++ +H +IK +LL I+ FG + P + + T+
Sbjct: 130 --KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTL-------------- 173
Query: 530 VYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
YL PE I G +K D++S G++ E L G+ P
Sbjct: 174 DYLPPEM-IEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 88/196 (44%), Gaps = 19/196 (9%)
Query: 371 APTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNG 430
A T VAV+ + E + +F +E + ++VRL L++ + + +G
Sbjct: 46 AETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHG 105
Query: 431 SLYAAL-----HAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKIL 485
L + L A + PP + +++A A G+ Y++ +K+VH ++ + +
Sbjct: 106 DLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCM 162
Query: 486 LDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQ 545
+ + I FG+ R + T+ K G G + ++APE+ G FT
Sbjct: 163 VAHDFTVKIGDFGMTRDIYETAYYRKG------GKG----LLPVRWMAPESLKDGV-FTT 211
Query: 546 KCDVYSFGIVLLEILT 561
D++SFG+VL EI +
Sbjct: 212 SSDMWSFGVVLWEITS 227
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 97/238 (40%), Gaps = 26/238 (10%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIAR-VQHPNI 407
V+GK G KV++ R V V + K SE + + V+HP +
Sbjct: 45 VIGKGSFG---KVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFL 101
Query: 408 VRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIH 467
V L + D+ + D+I G L+ L P AR A+ A L Y+H
Sbjct: 102 VGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEP----RARFYAAE-IASALGYLH 156
Query: 468 EYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAI 527
+ V+ ++K ILLD + H ++ FGL + E I + T S
Sbjct: 157 SLN---IVYRDLKPENILLDSQGHIVLTDFGLCK-----------ENIEHNSTTSTFCGT 202
Query: 528 SNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR 585
YLAPE ++ + + D + G VL E+L G LP N + ++++ K +
Sbjct: 203 PE-YLAPEV-LHKQPYDRTVDWWCLGAVLYEMLYG-LPPFYSRNTAEMYDNILNKPLQ 257
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 96/218 (44%), Gaps = 21/218 (9%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAP-TVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
+G+ G++Y+ V +G P T VA++ + E + +F +E + ++V
Sbjct: 27 LGQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 85
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDS-----LPPLPWEARLKIAQGTARGL 463
RL L+I + + G L + L + + L P +++A A G+
Sbjct: 86 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 464 MYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSR 523
Y++ K+VH ++ + ++ ++ I FG+ R + T K G G
Sbjct: 146 AYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKG------GKG-- 194
Query: 524 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT 561
+ +++PE+ G FT DV+SFG+VL EI T
Sbjct: 195 --LLPVRWMSPESLKDGV-FTTYSDVWSFGVVLWEIAT 229
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 107/238 (44%), Gaps = 29/238 (12%)
Query: 341 DLLRASAYVV-GKSKNGIMYKVVVGRG-----------SGMGAPTVVAVRRLTEGDATWR 388
+L++A +VV G S + + V+GRG G AV+ L
Sbjct: 33 ELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE 92
Query: 389 FKDFESEVEAIARVQHPNIVRLKAFYYAND-EKLLISDFIRNGSLYAALHAGPSDSLPPL 447
F +E + HPN++ L ++ L++ ++++G L + + P +
Sbjct: 93 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PTV 150
Query: 448 PWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTS 507
+ + A+G+ Y+ + +K+VH ++ + +LD++ ++ FGL R
Sbjct: 151 --KDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-----D 200
Query: 508 KVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
K V + TG+++ ++A E+ + KFT K DV+SFG++L E++T P
Sbjct: 201 MYDKEYYSVHNKTGAKLPV---KWMALES-LQTQKFTTKSDVWSFGVLLWELMTRGAP 254
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 87/196 (44%), Gaps = 19/196 (9%)
Query: 371 APTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNG 430
A T VAV+ + E + +F +E + ++VRL L++ + + +G
Sbjct: 45 AETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHG 104
Query: 431 SLYAAL-----HAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKIL 485
L + L A + PP + +++A A G+ Y++ +K+VH ++ + +
Sbjct: 105 DLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCM 161
Query: 486 LDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQ 545
+ + I FG+ R + T K G G + ++APE+ G FT
Sbjct: 162 VAHDFTVKIGDFGMTRDIYETDYYRK------GGKG----LLPVRWMAPESLKDGV-FTT 210
Query: 546 KCDVYSFGIVLLEILT 561
D++SFG+VL EI +
Sbjct: 211 SSDMWSFGVVLWEITS 226
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 103/238 (43%), Gaps = 27/238 (11%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
V K +G +V++ + GA + + + + T EV + ++ HPNI++
Sbjct: 26 VKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMK 85
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEY 469
L F+ L+ + R G L+ + S +A + I + G Y+H++
Sbjct: 86 LYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFS----EVDAAV-IMKQVLSGTTYLHKH 140
Query: 470 SPRKYVHGNIKSTKILLDDELHPC---ISGFGLNRLLPGTSKVTKNETIVTSGTGSRISA 526
+ VH ++K +LL+ + I FGL+ K+ + GT
Sbjct: 141 N---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKER-----LGTA----- 187
Query: 527 ISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAF 584
Y+APE + K+ +KCDV+S G++L +L G P G + D + L+ + + F
Sbjct: 188 ---YYIAPE--VLRKKYDEKCDVWSCGVILYILLCG-YPPFGGQTDQEILKRVEKGKF 239
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 102/240 (42%), Gaps = 31/240 (12%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
V K +G +V++ + GA + + + + T EV + ++ HPNI++
Sbjct: 9 VKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMK 68
Query: 410 LKAFYYANDEKLLISDFIRNGSLY--AALHAGPSDSLPPLPWEARLKIAQGTARGLMYIH 467
L F+ L+ + R G L+ L S+ + I + G Y+H
Sbjct: 69 LYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV-------IMKQVLSGTTYLH 121
Query: 468 EYSPRKYVHGNIKSTKILLDDELHPC---ISGFGLNRLLPGTSKVTKNETIVTSGTGSRI 524
+++ VH ++K +LL+ + I FGL+ K+ + GT
Sbjct: 122 KHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKER-----LGTA--- 170
Query: 525 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAF 584
Y+APE + K+ +KCDV+S G++L +L G P G + D + L+ + + F
Sbjct: 171 -----YYIAPE--VLRKKYDEKCDVWSCGVILYILLCG-YPPFGGQTDQEILKRVEKGKF 222
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 107/238 (44%), Gaps = 29/238 (12%)
Query: 341 DLLRASAYVV-GKSKNGIMYKVVVGRG-----------SGMGAPTVVAVRRLTEGDATWR 388
+L++A +VV G S + + V+GRG G AV+ L
Sbjct: 14 ELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE 73
Query: 389 FKDFESEVEAIARVQHPNIVRLKAFYYAND-EKLLISDFIRNGSLYAALHAGPSDSLPPL 447
F +E + HPN++ L ++ L++ ++++G L + + P +
Sbjct: 74 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PTV 131
Query: 448 PWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTS 507
+ + A+G+ Y+ + +K+VH ++ + +LD++ ++ FGL R
Sbjct: 132 --KDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-----D 181
Query: 508 KVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
K V + TG+++ ++A E+ + KFT K DV+SFG++L E++T P
Sbjct: 182 MYDKEYYSVHNKTGAKLPV---KWMALES-LQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 107/238 (44%), Gaps = 29/238 (12%)
Query: 341 DLLRASAYVV-GKSKNGIMYKVVVGRG-----------SGMGAPTVVAVRRLTEGDATWR 388
+L++A +VV G S + + V+GRG G AV+ L
Sbjct: 10 ELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE 69
Query: 389 FKDFESEVEAIARVQHPNIVRLKAFYYAND-EKLLISDFIRNGSLYAALHAGPSDSLPPL 447
F +E + HPN++ L ++ L++ ++++G L + + P +
Sbjct: 70 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PTV 127
Query: 448 PWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTS 507
+ + A+G+ Y+ + +K+VH ++ + +LD++ ++ FGL R
Sbjct: 128 --KDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-----D 177
Query: 508 KVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
K V + TG+++ ++A E+ + KFT K DV+SFG++L E++T P
Sbjct: 178 MYDKEYYSVHNKTGAKLPV---KWMALES-LQTQKFTTKSDVWSFGVLLWELMTRGAP 231
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 107/238 (44%), Gaps = 29/238 (12%)
Query: 341 DLLRASAYVV-GKSKNGIMYKVVVGRG-----------SGMGAPTVVAVRRLTEGDATWR 388
+L++A +VV G S + + V+GRG G AV+ L
Sbjct: 13 ELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE 72
Query: 389 FKDFESEVEAIARVQHPNIVRLKAFYYAND-EKLLISDFIRNGSLYAALHAGPSDSLPPL 447
F +E + HPN++ L ++ L++ ++++G L + + P +
Sbjct: 73 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PTV 130
Query: 448 PWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTS 507
+ + A+G+ Y+ + +K+VH ++ + +LD++ ++ FGL R
Sbjct: 131 --KDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-----D 180
Query: 508 KVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
K V + TG+++ ++A E+ + KFT K DV+SFG++L E++T P
Sbjct: 181 MYDKEYYSVHNKTGAKLPV---KWMALES-LQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 81/171 (47%), Gaps = 26/171 (15%)
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLK 454
EV+ + ++ HPNI++L F+ L+ + G L+ + + S +
Sbjct: 99 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA-----R 153
Query: 455 IAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPC---ISGFGLNRLLPGTSKVTK 511
I + G+ Y+H+ K VH ++K +LL+ + I FGL+ + K+
Sbjct: 154 IIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM-- 208
Query: 512 NETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTG 562
+ I T+ Y+APE ++G+ + +KCDV+S G++L +L+G
Sbjct: 209 KDKIGTA-----------YYIAPEV-LHGT-YDEKCDVWSTGVILYILLSG 246
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 107/238 (44%), Gaps = 29/238 (12%)
Query: 341 DLLRASAYVV-GKSKNGIMYKVVVGRG-----------SGMGAPTVVAVRRLTEGDATWR 388
+L++A +VV G S + + V+GRG G AV+ L
Sbjct: 12 ELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE 71
Query: 389 FKDFESEVEAIARVQHPNIVRLKAFYYAND-EKLLISDFIRNGSLYAALHAGPSDSLPPL 447
F +E + HPN++ L ++ L++ ++++G L + + P +
Sbjct: 72 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PTV 129
Query: 448 PWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTS 507
+ + A+G+ Y+ + +K+VH ++ + +LD++ ++ FGL R
Sbjct: 130 --KDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-----D 179
Query: 508 KVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
K V + TG+++ ++A E+ + KFT K DV+SFG++L E++T P
Sbjct: 180 MYDKEYYSVHNKTGAKLPV---KWMALES-LQTQKFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 107/238 (44%), Gaps = 29/238 (12%)
Query: 341 DLLRASAYVV-GKSKNGIMYKVVVGRG-----------SGMGAPTVVAVRRLTEGDATWR 388
+L++A +VV G S + + V+GRG G AV+ L
Sbjct: 15 ELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE 74
Query: 389 FKDFESEVEAIARVQHPNIVRLKAFYYAND-EKLLISDFIRNGSLYAALHAGPSDSLPPL 447
F +E + HPN++ L ++ L++ ++++G L + + P +
Sbjct: 75 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PTV 132
Query: 448 PWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTS 507
+ + A+G+ Y+ + +K+VH ++ + +LD++ ++ FGL R
Sbjct: 133 --KDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-----D 182
Query: 508 KVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
K V + TG+++ ++A E+ + KFT K DV+SFG++L E++T P
Sbjct: 183 MYDKEYYSVHNKTGAKLPV---KWMALES-LQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 88/216 (40%), Gaps = 26/216 (12%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK K G +Y + + A V+ +L + + + EVE + ++HPNI+R
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR---REVEIQSHLRHPNILR 72
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEY 469
L +++ LI ++ G++Y L L + A L Y H
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTATYITELANALSYCHS- 126
Query: 470 SPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISN 529
++ +H +IK +LL I+ FG + P + + T+
Sbjct: 127 --KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTL-------------- 170
Query: 530 VYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
YL PE I G +K D++S G++ E L G+ P
Sbjct: 171 DYLPPEM-IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 107/238 (44%), Gaps = 29/238 (12%)
Query: 341 DLLRASAYVV-GKSKNGIMYKVVVGRG-----------SGMGAPTVVAVRRLTEGDATWR 388
+L++A +VV G S + + V+GRG G AV+ L
Sbjct: 34 ELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE 93
Query: 389 FKDFESEVEAIARVQHPNIVRLKAFYYAND-EKLLISDFIRNGSLYAALHAGPSDSLPPL 447
F +E + HPN++ L ++ L++ ++++G L + + P +
Sbjct: 94 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PTV 151
Query: 448 PWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTS 507
+ + A+G+ Y+ + +K+VH ++ + +LD++ ++ FGL R
Sbjct: 152 --KDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-----D 201
Query: 508 KVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
K V + TG+++ ++A E+ + KFT K DV+SFG++L E++T P
Sbjct: 202 MYDKEYYSVHNKTGAKLPV---KWMALES-LQTQKFTTKSDVWSFGVLLWELMTRGAP 255
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 81/171 (47%), Gaps = 26/171 (15%)
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLK 454
EV+ + ++ HPNI++L F+ L+ + G L+ + + S +
Sbjct: 100 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA-----R 154
Query: 455 IAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPC---ISGFGLNRLLPGTSKVTK 511
I + G+ Y+H+ K VH ++K +LL+ + I FGL+ + K+
Sbjct: 155 IIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM-- 209
Query: 512 NETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTG 562
+ I T+ Y+APE ++G+ + +KCDV+S G++L +L+G
Sbjct: 210 KDKIGTA-----------YYIAPEV-LHGT-YDEKCDVWSTGVILYILLSG 247
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 124/307 (40%), Gaps = 59/307 (19%)
Query: 356 GIMYKVVVGRGSGMGA-----PTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVR 409
G +VV+ G+ VAV+ L + D SE+E + + +H NI+
Sbjct: 46 GAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIN 105
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPP---------------LPWEARLK 454
L + +I ++ G+L L A PP + ++ +
Sbjct: 106 LLGACTQDGPLYVIVEYASKGNLREYLRA----RRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 455 IAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNET 514
ARG+ Y+ + +K +H ++ + +L+ + I+ FGL R + K
Sbjct: 162 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKT-- 216
Query: 515 IVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAG-PEND 572
T R+ ++APEA ++ +T + DV+SFG+++ EI T G P G P +
Sbjct: 217 -----TNGRLPV---KWMAPEA-LFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267
Query: 573 GKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTV 632
L L+++ R +P + E+ + + +C P RP + +
Sbjct: 268 ---LFKLLKEGHRMDKPAN------CTNEL---------YMMMRDCWHAVPSQRPTFKQL 309
Query: 633 SESLDRV 639
E LDR+
Sbjct: 310 VEDLDRI 316
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 88/216 (40%), Gaps = 26/216 (12%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK K G +Y + + A V+ +L + + + EVE + ++HPNI+R
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR---REVEIQSHLRHPNILR 77
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEY 469
L +++ LI ++ G++Y L L + A L Y H
Sbjct: 78 LYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHS- 131
Query: 470 SPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISN 529
++ +H +IK +LL I+ FG + P + + T+
Sbjct: 132 --KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTL-------------- 175
Query: 530 VYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
YL PE I G +K D++S G++ E L G+ P
Sbjct: 176 DYLPPEM-IEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 98/233 (42%), Gaps = 33/233 (14%)
Query: 356 GIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYY 415
G KV + R G V + T+ +++ K F EV + HPNIV+L
Sbjct: 25 GNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIXKVLNHPNIVKLFEVIE 83
Query: 416 ANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYV 475
L+ ++ G ++ L A EAR K Q + Y H+ + V
Sbjct: 84 TEKTLYLVXEYASGGEVFDYLVAHGRXK----EKEARAKFRQ-IVSAVQYCHQ---KFIV 135
Query: 476 HGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNV--YLA 533
H ++K+ +LLD + + I+ FG + NE G+++ A Y A
Sbjct: 136 HRDLKAENLLLDADXNIKIADFGFS-----------NEFTF----GNKLDAFCGAPPYAA 180
Query: 534 PEARIYGSKFTQ-KCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR 585
PE G K+ + DV+S G++L +++G LP DG+ L+ L + R
Sbjct: 181 PEL-FQGKKYDGPEVDVWSLGVILYTLVSGSLP-----FDGQNLKELRERVLR 227
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 107/238 (44%), Gaps = 29/238 (12%)
Query: 341 DLLRASAYVV-GKSKNGIMYKVVVGRG-----------SGMGAPTVVAVRRLTEGDATWR 388
+L++A +VV G S + + V+GRG G AV+ L
Sbjct: 7 ELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE 66
Query: 389 FKDFESEVEAIARVQHPNIVRLKAFYYAND-EKLLISDFIRNGSLYAALHAGPSDSLPPL 447
F +E + HPN++ L ++ L++ ++++G L + + P +
Sbjct: 67 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PTV 124
Query: 448 PWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTS 507
+ + A+G+ Y+ + +K+VH ++ + +LD++ ++ FGL R
Sbjct: 125 --KDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-----D 174
Query: 508 KVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
K V + TG+++ ++A E+ + KFT K DV+SFG++L E++T P
Sbjct: 175 MYDKEYYSVHNKTGAKLPV---KWMALES-LQTQKFTTKSDVWSFGVLLWELMTRGAP 228
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 88/216 (40%), Gaps = 26/216 (12%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK K G +Y + + A V+ +L + + + EVE + ++HPNI+R
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR---REVEIQSHLRHPNILR 98
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEY 469
L +++ LI ++ G++Y L L + A L Y H
Sbjct: 99 LYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTATYITELANALSYCHS- 152
Query: 470 SPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISN 529
++ +H +IK +LL I+ FG + P + + T+
Sbjct: 153 --KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTL-------------- 196
Query: 530 VYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
YL PE I G +K D++S G++ E L G+ P
Sbjct: 197 DYLPPEM-IEGRMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 94/204 (46%), Gaps = 32/204 (15%)
Query: 362 VVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKL 421
+ G+ + + V++ T+ ++ R EV+ + ++ HPNI++L F+
Sbjct: 49 ITGQECAVKVISKRQVKQKTDKESLLR------EVQLLKQLDHPNIMKLYEFFEDKGYFY 102
Query: 422 LISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKS 481
L+ + G L+ + + S +I + G+ Y+H+ K VH ++K
Sbjct: 103 LVGEVYTGGELFDEIISRKRFSEVDAA-----RIIRQVLSGITYMHK---NKIVHRDLKP 154
Query: 482 TKILLDDELHPC---ISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARI 538
+LL+ + I FGL+ + K+ + I T+ Y+APE +
Sbjct: 155 ENLLLESKSKDANIRIIDFGLSTHFEASKKM--KDKIGTA-----------YYIAPEV-L 200
Query: 539 YGSKFTQKCDVYSFGIVLLEILTG 562
+G+ + +KCDV+S G++L +L+G
Sbjct: 201 HGT-YDEKCDVWSTGVILYILLSG 223
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 79/174 (45%), Gaps = 24/174 (13%)
Query: 393 ESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEAR 452
E E+ + ++HP+I++L + +++ ++ G L+ + + +
Sbjct: 57 EREISYLKLLRHPHIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKR-----MTEDEG 110
Query: 453 LKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKN 512
+ Q + Y H + K VH ++K +LLDD L+ I+ FGL+
Sbjct: 111 RRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLS------------ 155
Query: 513 ETIVTSGTGSRISAISNVYLAPEARIYGSKFTQ-KCDVYSFGIVLLEILTGRLP 565
I+T G + S S Y APE I G + + DV+S GIVL +L GRLP
Sbjct: 156 -NIMTDGNFLKTSCGSPNYAAPEV-INGKLYAGPEVDVWSCGIVLYVMLVGRLP 207
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 119/291 (40%), Gaps = 40/291 (13%)
Query: 356 GIMYKVVVGRGSGMG---APTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLK 411
G KVV G+G A VAV+ L + SE++ ++ + QH NIV L
Sbjct: 57 GAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLL 116
Query: 412 AFYYANDEKLLISDFIRNGSLYAALHAGPSDSLP-----PLPWEARLKIAQGTARGLMYI 466
L+I+++ G L L L PL L + A+G+ ++
Sbjct: 117 GACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFL 176
Query: 467 HEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISA 526
+ + +H ++ + +LL + I FGL R + + + G +
Sbjct: 177 ---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR------DIMNDSNYIVKGN----AR 223
Query: 527 ISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFR 585
+ ++APE+ I+ +T + DV+S+GI+L EI + G P G + K LV+ ++
Sbjct: 224 LPVKWMAPES-IFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK-FYKLVKDGYQ 281
Query: 586 ERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESL 636
+P P K I++ Q C L+P RP + + L
Sbjct: 282 MAQP---AFAP---KNIYSIMQA---------CWALEPTHRPTFQQICSFL 317
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 118/276 (42%), Gaps = 44/276 (15%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRL-KAFYYANDEKLLISDFIRNGSL 432
VAV+ L EG + SE++ + + H N+V L A ++I +F + G+L
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 433 YAALHAGPSDSLPP-----------LPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKS 481
L + ++ +P L E + + A+G+ ++ + RK +H ++ +
Sbjct: 120 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAA 176
Query: 482 TKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGS 541
ILL ++ I FGL R + K+ V G + + ++APE I+
Sbjct: 177 RNILLSEKNVVKICDFGLAR------DIXKDPDXVRKGD----ARLPLKWMAPET-IFDR 225
Query: 542 KFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVK 600
+T + DV+SFG++L EI + G P G + D + L ++ R R P + P +
Sbjct: 226 VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL-KEGTRMRAP--DYTTPEM-- 280
Query: 601 EIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESL 636
+ L+C +P RP + E L
Sbjct: 281 -----------YQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 124/307 (40%), Gaps = 59/307 (19%)
Query: 356 GIMYKVVVGRGSGMGA-----PTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVR 409
G +VV+ G+ VAV+ L + D SE+E + + +H NI+
Sbjct: 33 GCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIN 92
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPP---------------LPWEARLK 454
L + +I ++ G+L L A PP + ++ +
Sbjct: 93 LLGACTQDGPLYVIVEYASKGNLREYLRA----RRPPGMEYSYDINRVPEEQMTFKDLVS 148
Query: 455 IAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNET 514
ARG+ Y+ + +K +H ++ + +L+ + I+ FGL R + K
Sbjct: 149 CTYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKT-- 203
Query: 515 IVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAG-PEND 572
T R+ ++APEA ++ +T + DV+SFG+++ EI T G P G P +
Sbjct: 204 -----TNGRLPV---KWMAPEA-LFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 254
Query: 573 GKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTV 632
L L+++ R +P + E+ + + +C P RP + +
Sbjct: 255 ---LFKLLKEGHRMDKPAN------CTNEL---------YMMMRDCWHAVPSQRPTFKQL 296
Query: 633 SESLDRV 639
E LDR+
Sbjct: 297 VEDLDRI 303
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 88/216 (40%), Gaps = 26/216 (12%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK K G +Y + + A V+ +L + + + EVE + ++HPNI+R
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR---REVEIQSHLRHPNILR 73
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEY 469
L +++ LI ++ G++Y L L + A L Y H
Sbjct: 74 LYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTATYITELANALSYCHS- 127
Query: 470 SPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISN 529
++ +H +IK +LL I+ FG + P + + T+
Sbjct: 128 --KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTL-------------- 171
Query: 530 VYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
YL PE I G +K D++S G++ E L G+ P
Sbjct: 172 DYLPPEM-IEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 87/196 (44%), Gaps = 19/196 (9%)
Query: 371 APTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNG 430
A T VAV+ + E + +F +E + ++VRL L++ + + +G
Sbjct: 46 AETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHG 105
Query: 431 SLYAAL-----HAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKIL 485
L + L A + PP + +++A A G+ Y++ +K+VH ++ + +
Sbjct: 106 DLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCM 162
Query: 486 LDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQ 545
+ + I FG+ R + T K G G + ++APE+ G FT
Sbjct: 163 VAHDFTVKIGDFGMTRDIYETDYYRKG------GKG----LLPVRWMAPESLKDGV-FTT 211
Query: 546 KCDVYSFGIVLLEILT 561
D++SFG+VL EI +
Sbjct: 212 SSDMWSFGVVLWEITS 227
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 124/307 (40%), Gaps = 59/307 (19%)
Query: 356 GIMYKVVVGRGSGMGA-----PTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVR 409
G +VV+ G+ VAV+ L + D SE+E + + +H NI+
Sbjct: 35 GCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIN 94
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPP---------------LPWEARLK 454
L + +I ++ G+L L A PP + ++ +
Sbjct: 95 LLGACTQDGPLYVIVEYASKGNLREYLRA----RRPPGMEYSYDINRVPEEQMTFKDLVS 150
Query: 455 IAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNET 514
ARG+ Y+ + +K +H ++ + +L+ + I+ FGL R + K
Sbjct: 151 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT-- 205
Query: 515 IVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAG-PEND 572
T R+ ++APEA ++ +T + DV+SFG+++ EI T G P G P +
Sbjct: 206 -----TNGRLPV---KWMAPEA-LFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 256
Query: 573 GKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTV 632
L L+++ R +P + E+ + + +C P RP + +
Sbjct: 257 ---LFKLLKEGHRMDKPAN------CTNEL---------YMMMRDCWHAVPSQRPTFKQL 298
Query: 633 SESLDRV 639
E LDR+
Sbjct: 299 VEDLDRI 305
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 88/216 (40%), Gaps = 26/216 (12%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK K G +Y + + A V+ +L + + + EVE + ++HPNI+R
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR---REVEIQSHLRHPNILR 72
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEY 469
L +++ LI ++ G++Y L L + A L Y H
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHS- 126
Query: 470 SPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISN 529
++ +H +IK +LL I+ FG + P + + T+
Sbjct: 127 --KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTL-------------- 170
Query: 530 VYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
YL PE I G +K D++S G++ E L G+ P
Sbjct: 171 DYLPPEM-IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 118/277 (42%), Gaps = 44/277 (15%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRL-KAFYYANDEKLLISDFIRNGS 431
VAV+ L EG + SE++ + + H N+V L A ++I +F + G+
Sbjct: 61 TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGN 120
Query: 432 LYAALHAGPSDSLPP-----------LPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIK 480
L L + ++ +P L E + + A+G+ ++ + RK +H ++
Sbjct: 121 LSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLA 177
Query: 481 STKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYG 540
+ ILL ++ I FGL R + K+ V G + + ++APE I+
Sbjct: 178 ARNILLSEKNVVKICDFGLAR------DIYKDPDYVRKGD----ARLPLKWMAPET-IFD 226
Query: 541 SKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALV 599
+T + DV+SFG++L EI + G P G + D + L ++ R R P + P +
Sbjct: 227 RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL-KEGTRMRAP--DYTTPEM- 282
Query: 600 KEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESL 636
+ L+C +P RP + E L
Sbjct: 283 ------------YQTMLDCWHGEPSQRPTFSELVEHL 307
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 88/216 (40%), Gaps = 26/216 (12%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK K G +Y + + A V+ +L + + + EVE + ++HPNI+R
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR---REVEIQSHLRHPNILR 72
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEY 469
L +++ LI ++ G++Y L L + A L Y H
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTATYITELANALSYCHS- 126
Query: 470 SPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISN 529
++ +H +IK +LL I+ FG + P + + T+
Sbjct: 127 --KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTL-------------- 170
Query: 530 VYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
YL PE I G +K D++S G++ E L G+ P
Sbjct: 171 DYLPPEM-IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 124/307 (40%), Gaps = 59/307 (19%)
Query: 356 GIMYKVVVGRGSGMGA-----PTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVR 409
G +VV+ G+ VAV+ L + D SE+E + + +H NI+
Sbjct: 38 GCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIN 97
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPP---------------LPWEARLK 454
L + +I ++ G+L L A PP + ++ +
Sbjct: 98 LLGACTQDGPLYVIVEYASKGNLREYLRA----RRPPGMEYSYDINRVPEEQMTFKDLVS 153
Query: 455 IAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNET 514
ARG+ Y+ + +K +H ++ + +L+ + I+ FGL R + K
Sbjct: 154 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT-- 208
Query: 515 IVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAG-PEND 572
T R+ ++APEA ++ +T + DV+SFG+++ EI T G P G P +
Sbjct: 209 -----TNGRLPV---KWMAPEA-LFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 259
Query: 573 GKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTV 632
L L+++ R +P + E+ + + +C P RP + +
Sbjct: 260 ---LFKLLKEGHRMDKPAN------CTNEL---------YMMMRDCWHAVPSQRPTFKQL 301
Query: 633 SESLDRV 639
E LDR+
Sbjct: 302 VEDLDRI 308
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 88/216 (40%), Gaps = 26/216 (12%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK K G +Y + + A V+ +L + + + EVE + ++HPNI+R
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR---REVEIQSHLRHPNILR 74
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEY 469
L +++ LI ++ G++Y L L + A L Y H
Sbjct: 75 LYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHS- 128
Query: 470 SPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISN 529
++ +H +IK +LL I+ FG + P + + T+
Sbjct: 129 --KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTL-------------- 172
Query: 530 VYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
YL PE I G +K D++S G++ E L G+ P
Sbjct: 173 DYLPPEM-IEGRMHDEKVDLWSLGVLCYEFLVGKPP 207
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 101/236 (42%), Gaps = 30/236 (12%)
Query: 332 DEGFSLELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKD 391
+E + + ++LRA +GK G + V M A + ++ E + ++
Sbjct: 9 NEDVNFDHFEILRA----IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEV---RN 61
Query: 392 FESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEA 451
E++ + ++HP +V L + ++ ++ D + G L L E
Sbjct: 62 VFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFK------EE 115
Query: 452 RLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTK 511
+K+ +M + ++ +H ++K ILLD+ H I+ F + +LP
Sbjct: 116 TVKLF--ICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLP------- 166
Query: 512 NETIVTSGTGSRISAISNVYLAPE--ARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
ET +T+ G++ Y+APE + G+ ++ D +S G+ E+L GR P
Sbjct: 167 RETQITTMAGTK------PYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRP 216
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 96/218 (44%), Gaps = 21/218 (9%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAP-TVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
+G+ G++Y+ V +G P T VA++ + E + +F +E + ++V
Sbjct: 33 LGQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 91
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAALHA-----GPSDSLPPLPWEARLKIAQGTARGL 463
RL L+I + + G L + L + + L P +++A A G+
Sbjct: 92 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 151
Query: 464 MYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSR 523
Y++ K+VH ++ + ++ ++ I FG+ R + T K G G
Sbjct: 152 AYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG------GKG-- 200
Query: 524 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT 561
+ +++PE+ G FT DV+SFG+VL EI T
Sbjct: 201 --LLPVRWMSPESLKDGV-FTTYSDVWSFGVVLWEIAT 235
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 88/216 (40%), Gaps = 26/216 (12%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK K G +Y + + A V+ +L + + + EVE + ++HPNI+R
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR---REVEIQSHLRHPNILR 72
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEY 469
L +++ LI ++ G++Y L L + A L Y H
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHS- 126
Query: 470 SPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISN 529
++ +H +IK +LL I+ FG + P + + T+
Sbjct: 127 --KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLCGTL-------------- 170
Query: 530 VYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
YL PE I G +K D++S G++ E L G+ P
Sbjct: 171 DYLPPEM-IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 79/171 (46%), Gaps = 22/171 (12%)
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLK 454
E++ + P IV +Y++ E + + + GSL L +P + K
Sbjct: 57 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-----IPEQILGK 111
Query: 455 IAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNET 514
++ +GL Y+ E K +H ++K + IL++ + FG++ L NE
Sbjct: 112 VSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDE---MANEF 166
Query: 515 IVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
+ GT S Y++PE R+ G+ ++ + D++S G+ L+E+ GR P
Sbjct: 167 V---GTRS--------YMSPE-RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 205
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 117/276 (42%), Gaps = 44/276 (15%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRL-KAFYYANDEKLLISDFIRNGSL 432
VAV+ L EG + SE++ + + H N+V L A ++I +F + G+L
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 433 YAALHAGPSDSLPP-----------LPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKS 481
L + ++ +P L E + + A+G+ ++ + RK +H ++ +
Sbjct: 120 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAA 176
Query: 482 TKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGS 541
ILL ++ I FGL R + K+ V G + ++APE I+
Sbjct: 177 RNILLSEKNVVKICDFGLAR------DIYKDPDYVRKGDAR----LPLKWMAPET-IFDR 225
Query: 542 KFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVK 600
+T + DV+SFG++L EI + G P G + D + L ++ R R P + P +
Sbjct: 226 VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL-KEGTRMRAP--DYTTPEM-- 280
Query: 601 EIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESL 636
+ L+C +P RP + E L
Sbjct: 281 -----------YQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 124/307 (40%), Gaps = 59/307 (19%)
Query: 356 GIMYKVVVGRGSGMGA-----PTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVR 409
G +VV+ G+ VAV+ L + D SE+E + + +H NI+
Sbjct: 46 GAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKNIIN 105
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPP---------------LPWEARLK 454
L + +I ++ G+L L A PP + ++ +
Sbjct: 106 LLGACTQDGPLYVIVEYASKGNLREYLRA----RRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 455 IAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNET 514
ARG+ Y+ + +K +H ++ + +L+ + I+ FGL R + K
Sbjct: 162 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT-- 216
Query: 515 IVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAG-PEND 572
T R+ ++APEA ++ +T + DV+SFG+++ EI T G P G P +
Sbjct: 217 -----TNGRLPV---KWMAPEA-LFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267
Query: 573 GKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTV 632
L L+++ R +P + E+ + + +C P RP + +
Sbjct: 268 ---LFKLLKEGHRMDKPAN------CTNEL---------YMMMRDCWHAVPSQRPTFKQL 309
Query: 633 SESLDRV 639
E LDR+
Sbjct: 310 VEDLDRI 316
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 117/276 (42%), Gaps = 44/276 (15%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRL-KAFYYANDEKLLISDFIRNGSL 432
VAV+ L EG + SE++ + + H N+V L A ++I +F + G+L
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 433 YAALHAGPSDSLPP-----------LPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKS 481
L + ++ +P L E + + A+G+ ++ + RK +H ++ +
Sbjct: 120 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAA 176
Query: 482 TKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGS 541
ILL ++ I FGL R + K+ V G + ++APE I+
Sbjct: 177 RNILLSEKNVVKICDFGLAR------DIYKDPDXVRKGDAR----LPLKWMAPET-IFDR 225
Query: 542 KFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVK 600
+T + DV+SFG++L EI + G P G + D + L ++ R R P + P +
Sbjct: 226 VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL-KEGTRMRAP--DYTTPEM-- 280
Query: 601 EIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESL 636
+ L+C +P RP + E L
Sbjct: 281 -----------YQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 88/216 (40%), Gaps = 26/216 (12%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK K G +Y + + A V+ +L + + + EVE + ++HPNI+R
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLR---REVEIQSHLRHPNILR 76
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEY 469
L +++ LI ++ G++Y L L + A L Y H
Sbjct: 77 LYGYFHDATRVYLILEYAPLGTVYREL-----QKLSRFDEQRTATYITELANALSYCHS- 130
Query: 470 SPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISN 529
++ +H +IK +LL I+ FG + P + + T T+
Sbjct: 131 --KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTLCGTL-------------- 174
Query: 530 VYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
YL PE I G +K D++S G++ E L G P
Sbjct: 175 DYLPPEM-IEGRMHDEKVDLWSLGVLCYEFLVGMPP 209
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 118/276 (42%), Gaps = 44/276 (15%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRL-KAFYYANDEKLLISDFIRNGSL 432
VAV+ L EG + SE++ + + H N+V L A ++I +F + G+L
Sbjct: 97 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 156
Query: 433 YAALHAGPSDSLPP-----------LPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKS 481
L + ++ +P L E + + A+G+ ++ + RK +H ++ +
Sbjct: 157 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAA 213
Query: 482 TKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGS 541
ILL ++ I FGL R + K+ V G + + ++APE I+
Sbjct: 214 RNILLSEKNVVKICDFGLAR------DIYKDPDYVRKGD----ARLPLKWMAPET-IFDR 262
Query: 542 KFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVK 600
+T + DV+SFG++L EI + G P G + D + L ++ R R P + P +
Sbjct: 263 VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL-KEGTRMRAP--DYTTPEM-- 317
Query: 601 EIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESL 636
+ L+C +P RP + E L
Sbjct: 318 -----------YQTMLDCWHGEPSQRPTFSELVEHL 342
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 124/307 (40%), Gaps = 59/307 (19%)
Query: 356 GIMYKVVVGRGSGMGA-----PTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVR 409
G +VV+ G+ VAV+ L + D SE+E + + +H NI+
Sbjct: 46 GAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIH 105
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPP---------------LPWEARLK 454
L + +I ++ G+L L A PP + ++ +
Sbjct: 106 LLGACTQDGPLYVIVEYASKGNLREYLRA----RRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 455 IAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNET 514
ARG+ Y+ + +K +H ++ + +L+ + I+ FGL R + K
Sbjct: 162 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT-- 216
Query: 515 IVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAG-PEND 572
T R+ ++APEA ++ +T + DV+SFG+++ EI T G P G P +
Sbjct: 217 -----TNGRLPV---KWMAPEA-LFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267
Query: 573 GKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTV 632
L L+++ R +P + E+ + + +C P RP + +
Sbjct: 268 ---LFKLLKEGHRMDKPAN------CTNEL---------YMMMRDCWHAVPSQRPTFKQL 309
Query: 633 SESLDRV 639
E LDR+
Sbjct: 310 VEDLDRI 316
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 96/218 (44%), Gaps = 21/218 (9%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAP-TVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
+G+ G++Y+ V +G P T VA++ + E + +F +E + ++V
Sbjct: 33 LGQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 91
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDS-----LPPLPWEARLKIAQGTARGL 463
RL L+I + + G L + L + + L P +++A A G+
Sbjct: 92 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 151
Query: 464 MYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSR 523
Y++ K+VH ++ + ++ ++ I FG+ R + T K G G
Sbjct: 152 AYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG------GKG-- 200
Query: 524 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT 561
+ +++PE+ G FT DV+SFG+VL EI T
Sbjct: 201 --LLPVRWMSPESLKDGV-FTTYSDVWSFGVVLWEIAT 235
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 117/276 (42%), Gaps = 44/276 (15%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRL-KAFYYANDEKLLISDFIRNGSL 432
VAV+ L EG + SE++ + + H N+V L A ++I +F + G+L
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 110
Query: 433 YAALHAGPSDSLPP-----------LPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKS 481
L + ++ +P L E + + A+G+ ++ + RK +H ++ +
Sbjct: 111 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAA 167
Query: 482 TKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGS 541
ILL ++ I FGL R + K+ V G + ++APE I+
Sbjct: 168 RNILLSEKNVVKICDFGLAR------DIXKDPDXVRKGDAR----LPLKWMAPET-IFDR 216
Query: 542 KFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVK 600
+T + DV+SFG++L EI + G P G + D + L ++ R R P + P +
Sbjct: 217 VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL-KEGTRMRAP--DYTTPEM-- 271
Query: 601 EIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESL 636
+ L+C +P RP + E L
Sbjct: 272 -----------YQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 107/269 (39%), Gaps = 36/269 (13%)
Query: 373 TVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL 432
T+VAV+ E F E + + HPNIVRL ++ + ++ G
Sbjct: 140 TLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 199
Query: 433 YAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHP 492
L + L + L++ A G+ Y+ + +H ++ + L+ ++
Sbjct: 200 LTFLRTEGAR----LRVKTLLQMVGDAAAGMEYLES---KCCIHRDLAARNCLVTEKNVL 252
Query: 493 CISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSF 552
IS FG++R + + + + G R + + APEA YG +++ + DV+SF
Sbjct: 253 KISDFGMSR--------EEADGVXAASGGLRQVPVK--WTAPEALNYG-RYSSESDVWSF 301
Query: 553 GIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLAT 611
GI+L E + G P P + V K R P E+ A+
Sbjct: 302 GILLWETFSLGASPY--PNLSNQQTREFVEKG--GRLPCPELCPDAV------------- 344
Query: 612 FHIALNCTELDPEFRPRMRTVSESLDRVK 640
F + C +P RP T+ + L ++
Sbjct: 345 FRLMEQCWAYEPGQRPSFSTIYQELQSIR 373
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 96/211 (45%), Gaps = 32/211 (15%)
Query: 362 VVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKL 421
+ G+ + + V++ T+ ++ R EV+ + ++ HPNI++L F+
Sbjct: 55 ITGQECAVKVISKRQVKQKTDKESLLR------EVQLLKQLDHPNIMKLYEFFEDKGYFY 108
Query: 422 LISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKS 481
L+ + G L+ + + S +I + G+ Y+H+ K VH ++K
Sbjct: 109 LVGEVYTGGELFDEIISRKRFSEVDAA-----RIIRQVLSGITYMHK---NKIVHRDLKP 160
Query: 482 TKILLDDELHPC---ISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARI 538
+LL+ + I FGL+ + K+ + I T+ Y+APE +
Sbjct: 161 ENLLLESKSKDANIRIIDFGLSTHFEASKKM--KDKIGTA-----------YYIAPEV-L 206
Query: 539 YGSKFTQKCDVYSFGIVLLEILTGRLPDAGP 569
+G+ + +KCDV+S G++L +L+G P G
Sbjct: 207 HGT-YDEKCDVWSTGVILYILLSGCPPFNGA 236
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 97/229 (42%), Gaps = 33/229 (14%)
Query: 360 KVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDE 419
KV + R G V + T+ +++ K F EV + + HPNIV+L
Sbjct: 29 KVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFEVIETEKT 87
Query: 420 KLLISDFIRNGSL--YAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHG 477
L+ ++ G + Y H + EAR K Q + Y H+ + VH
Sbjct: 88 LYLVMEYASGGEVFDYLVAHGRMKEK------EARAKFRQ-IVSAVQYCHQ---KFIVHR 137
Query: 478 NIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEAR 537
++K+ +LLD +++ I+ FG + NE T G S Y APE
Sbjct: 138 DLKAENLLLDADMNIKIADFGFS-----------NE--FTFGNKLDEFCGSPPYAAPEL- 183
Query: 538 IYGSKFTQ-KCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR 585
G K+ + DV+S G++L +++G LP DG+ L+ L + R
Sbjct: 184 FQGKKYDGPEVDVWSLGVILYTLVSGSLP-----FDGQNLKELRERVLR 227
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 125/307 (40%), Gaps = 59/307 (19%)
Query: 356 GIMYKVVVGRGSGMGA-----PTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVR 409
G +VV+ G+ VAV+ L + D SE+E + + +H NI+
Sbjct: 46 GAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIN 105
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPP---------------LPWEARLK 454
L + +I ++ G+L L A PP + ++ +
Sbjct: 106 LLGACTQDGPLYVIVEYASKGNLREYLRA----RRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 455 IAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNET 514
ARG+ Y+ + +K +H ++ + +L+ + I+ FGL R + N
Sbjct: 162 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDI-------NNID 211
Query: 515 IVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAG-PEND 572
+ T R+ ++APEA ++ +T + DV+SFG+++ EI T G P G P +
Sbjct: 212 YYKNTTNGRLPV---KWMAPEA-LFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267
Query: 573 GKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTV 632
L L+++ R +P + E+ + + +C P RP + +
Sbjct: 268 ---LFKLLKEGHRMDKPAN------CTNEL---------YMMMRDCWHAVPSQRPTFKQL 309
Query: 633 SESLDRV 639
E LDR+
Sbjct: 310 VEDLDRI 316
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 91/219 (41%), Gaps = 40/219 (18%)
Query: 362 VVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEV----EAIARVQ-----------HPN 406
V+GRGS V + RL + D + K + E+ E I VQ HP
Sbjct: 16 VIGRGSY----AKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPF 71
Query: 407 IVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYI 466
+V L + + + +++ G L H LP AR A+ + L Y+
Sbjct: 72 LVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPEE--HARFYSAE-ISLALNYL 126
Query: 467 HEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISA 526
HE R ++ ++K +LLD E H ++ +G+ + E + T S
Sbjct: 127 HE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCK-----------EGLRPGDTTSXFCG 172
Query: 527 ISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
N Y+APE + G + D ++ G+++ E++ GR P
Sbjct: 173 TPN-YIAPEI-LRGEDYGFSVDWWALGVLMFEMMAGRSP 209
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 108/238 (45%), Gaps = 29/238 (12%)
Query: 341 DLLRASAYVV-GKSKNGIMYKVVVGRG-----------SGMGAPTVVAVRRLTEGDATWR 388
+L++A +VV G S + + V+GRG G AV+ L
Sbjct: 16 ELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE 75
Query: 389 FKDFESEVEAIARVQHPNIVRLKAFYYAND-EKLLISDFIRNGSLYAALHAGPSDSLPPL 447
F +E + HPN++ L ++ L++ ++++G L + + P +
Sbjct: 76 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PTV 133
Query: 448 PWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTS 507
+ + A+G+ ++ + +K+VH ++ + +LD++ ++ FGL R
Sbjct: 134 --KDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-----D 183
Query: 508 KVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
+ K V + TG+++ ++A E+ + KFT K DV+SFG++L E++T P
Sbjct: 184 MLDKEFDSVHNKTGAKLPV---KWMALES-LQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 96/218 (44%), Gaps = 21/218 (9%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAP-TVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
+G+ G++Y+ V +G P T VA++ + E + +F +E + ++V
Sbjct: 23 LGQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 81
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAALHA-----GPSDSLPPLPWEARLKIAQGTARGL 463
RL L+I + + G L + L + + L P +++A A G+
Sbjct: 82 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 141
Query: 464 MYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSR 523
Y++ K+VH ++ + ++ ++ I FG+ R + T K G G
Sbjct: 142 AYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG------GKG-- 190
Query: 524 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT 561
+ +++PE+ G FT DV+SFG+VL EI T
Sbjct: 191 --LLPVRWMSPESLKDGV-FTTYSDVWSFGVVLWEIAT 225
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 107/269 (39%), Gaps = 36/269 (13%)
Query: 373 TVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL 432
T+VAV+ E F E + + HPNIVRL ++ + ++ G
Sbjct: 140 TLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 199
Query: 433 YAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHP 492
L + L + L++ A G+ Y+ + +H ++ + L+ ++
Sbjct: 200 LTFLRTEGAR----LRVKTLLQMVGDAAAGMEYLES---KCCIHRDLAARNCLVTEKNVL 252
Query: 493 CISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSF 552
IS FG++R + + + + G R + + APEA YG +++ + DV+SF
Sbjct: 253 KISDFGMSR--------EEADGVYAASGGLRQVPVK--WTAPEALNYG-RYSSESDVWSF 301
Query: 553 GIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLAT 611
GI+L E + G P P + V K R P E+ A+
Sbjct: 302 GILLWETFSLGASPY--PNLSNQQTREFVEKG--GRLPCPELCPDAV------------- 344
Query: 612 FHIALNCTELDPEFRPRMRTVSESLDRVK 640
F + C +P RP T+ + L ++
Sbjct: 345 FRLMEQCWAYEPGQRPSFSTIYQELQSIR 373
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 73/169 (43%), Gaps = 15/169 (8%)
Query: 404 HPNIVRLKAFYY----ANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGT 459
HPNI+RL A+ A E L+ F + G+L+ + D L + L + G
Sbjct: 85 HPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIER-LKDKGNFLTEDQILWLLLGI 143
Query: 460 ARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFG-LNRLLPGTSKVTKNETIVTS 518
RGL IH + Y H ++K T ILL DE P + G +N+ + +
Sbjct: 144 CRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVE--GSRQALTLQ 198
Query: 519 GTGSRISAISNVYLAPEARIYGSK--FTQKCDVYSFGIVLLEILTGRLP 565
++ IS Y APE S ++ DV+S G VL ++ G P
Sbjct: 199 DWAAQRCTIS--YRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGP 245
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 124/307 (40%), Gaps = 59/307 (19%)
Query: 356 GIMYKVVVGRGSGMGA-----PTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVR 409
G +VV+ G+ VAV+ L + D SE+E + + +H NI+
Sbjct: 92 GCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIN 151
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPP---------------LPWEARLK 454
L + +I ++ G+L L A PP + ++ +
Sbjct: 152 LLGACTQDGPLYVIVEYASKGNLREYLRA----RRPPGMEYSYDINRVPEEQMTFKDLVS 207
Query: 455 IAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNET 514
ARG+ Y+ + +K +H ++ + +L+ + I+ FGL R + K
Sbjct: 208 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT-- 262
Query: 515 IVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAG-PEND 572
T R+ ++APEA ++ +T + DV+SFG+++ EI T G P G P +
Sbjct: 263 -----TNGRLPV---KWMAPEA-LFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 313
Query: 573 GKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTV 632
L L+++ R +P + E+ + + +C P RP + +
Sbjct: 314 ---LFKLLKEGHRMDKPAN------CTNEL---------YMMMRDCWHAVPSQRPTFKQL 355
Query: 633 SESLDRV 639
E LDR+
Sbjct: 356 VEDLDRI 362
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 89/187 (47%), Gaps = 18/187 (9%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
VA++ L +G ++ E + + ++ +P IVRL A + +L+ + G L+
Sbjct: 366 VAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGPLHK 424
Query: 435 ALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCI 494
L G + +P ++ + G+ Y+ E + +VH N+ + +LL + + I
Sbjct: 425 FL-VGKREEIPV---SNVAELLHQVSMGMKYLEE---KNFVHRNLAARNVLLVNRHYAKI 477
Query: 495 SGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGI 554
S FGL++ L +++ T+ + + + APE I KF+ + DV+S+G+
Sbjct: 478 SDFGLSKALGA------DDSYYTARSAGKWPL---KWYAPEC-INFRKFSSRSDVWSYGV 527
Query: 555 VLLEILT 561
+ E L+
Sbjct: 528 TMWEALS 534
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 88/216 (40%), Gaps = 26/216 (12%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK K G +Y + + A V+ +L + + + EVE + ++HPNI+R
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR---REVEIQSHLRHPNILR 72
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEY 469
L +++ LI ++ G++Y L L + A L Y H
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHS- 126
Query: 470 SPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISN 529
++ +H +IK +LL I+ FG + P + + T+
Sbjct: 127 --KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTL-------------- 170
Query: 530 VYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
YL PE I G +K D++S G++ E L G+ P
Sbjct: 171 DYLPPEM-IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 88/216 (40%), Gaps = 26/216 (12%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK K G +Y + + A V+ +L + + + EVE + ++HPNI+R
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR---REVEIQSHLRHPNILR 75
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEY 469
L +++ LI ++ G++Y L L + A L Y H
Sbjct: 76 LYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCHS- 129
Query: 470 SPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISN 529
++ +H +IK +LL I+ FG + P + + T+
Sbjct: 130 --KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTL-------------- 173
Query: 530 VYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
YL PE I G +K D++S G++ E L G+ P
Sbjct: 174 DYLPPEM-IEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 124/307 (40%), Gaps = 59/307 (19%)
Query: 356 GIMYKVVVGRGSGMGA-----PTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVR 409
G +VV+ G+ VAV+ L + D SE+E + + +H NI+
Sbjct: 46 GAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIT 105
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPP---------------LPWEARLK 454
L + +I ++ G+L L A PP + ++ +
Sbjct: 106 LLGACTQDGPLYVIVEYASKGNLREYLRA----RRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 455 IAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNET 514
ARG+ Y+ + +K +H ++ + +L+ + I+ FGL R + K
Sbjct: 162 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT-- 216
Query: 515 IVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAG-PEND 572
T R+ ++APEA ++ +T + DV+SFG+++ EI T G P G P +
Sbjct: 217 -----TNGRLPV---KWMAPEA-LFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267
Query: 573 GKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTV 632
L L+++ R +P + E+ + + +C P RP + +
Sbjct: 268 ---LFKLLKEGHRMDKPAN------CTNEL---------YMMMRDCWHAVPSQRPTFKQL 309
Query: 633 SESLDRV 639
E LDR+
Sbjct: 310 VEDLDRI 316
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 124/307 (40%), Gaps = 59/307 (19%)
Query: 356 GIMYKVVVGRGSGMGA-----PTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVR 409
G +VV+ G+ VAV+ L + D SE+E + + +H NI+
Sbjct: 46 GAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIN 105
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPP---------------LPWEARLK 454
L + +I ++ G+L L A PP + ++ +
Sbjct: 106 LLGACTQDGPLYVIVEYASKGNLREYLRA----RRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 455 IAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNET 514
ARG+ Y+ + +K +H ++ + +L+ + I+ FGL R + K
Sbjct: 162 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKT-- 216
Query: 515 IVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAG-PEND 572
T R+ ++APEA ++ +T + DV+SFG+++ EI T G P G P +
Sbjct: 217 -----TNGRLPV---KWMAPEA-LFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267
Query: 573 GKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTV 632
L L+++ R +P + E+ + + +C P RP + +
Sbjct: 268 ---LFKLLKEGHRMDKPAN------CTNEL---------YMMMRDCWHAVPSQRPTFKQL 309
Query: 633 SESLDRV 639
E LDR+
Sbjct: 310 VEDLDRI 316
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 92/221 (41%), Gaps = 44/221 (19%)
Query: 362 VVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEV----EAIARVQ-----------HPN 406
V+GRGS V + RL + D + K + E+ E I VQ HP
Sbjct: 27 VIGRGS----YAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPF 82
Query: 407 IVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYI 466
+V L + + + +++ G L H LP AR A+ + L Y+
Sbjct: 83 LVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPEE--HARFYSAE-ISLALNYL 137
Query: 467 HEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNR--LLPGTSKVTKNETIVTSGTGSRI 524
HE R ++ ++K +LLD E H ++ +G+ + L PG T S
Sbjct: 138 HE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD-------------TTSXF 181
Query: 525 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
N Y+APE + G + D ++ G+++ E++ GR P
Sbjct: 182 CGTPN-YIAPEI-LRGEDYGFSVDWWALGVLMFEMMAGRSP 220
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 96/218 (44%), Gaps = 21/218 (9%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAP-TVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
+G+ G++Y+ V +G P T VA++ + E + +F +E + ++V
Sbjct: 20 LGQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 78
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDS-----LPPLPWEARLKIAQGTARGL 463
RL L+I + + G L + L + + L P +++A A G+
Sbjct: 79 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 464 MYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSR 523
Y++ K+VH ++ + ++ ++ I FG+ R + T K G G
Sbjct: 139 AYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG------GKG-- 187
Query: 524 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT 561
+ +++PE+ G FT DV+SFG+VL EI T
Sbjct: 188 --LLPVRWMSPESLKDGV-FTTYSDVWSFGVVLWEIAT 222
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 91/219 (41%), Gaps = 40/219 (18%)
Query: 362 VVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEV----EAIARVQ-----------HPN 406
V+GRGS V + RL + D + K + E+ E I VQ HP
Sbjct: 12 VIGRGSY----AKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPF 67
Query: 407 IVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYI 466
+V L + + + +++ G L H LP AR A+ + L Y+
Sbjct: 68 LVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPEE--HARFYSAE-ISLALNYL 122
Query: 467 HEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISA 526
HE R ++ ++K +LLD E H ++ +G+ + E + T S
Sbjct: 123 HE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCK-----------EGLRPGDTTSXFCG 168
Query: 527 ISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
N Y+APE + G + D ++ G+++ E++ GR P
Sbjct: 169 TPN-YIAPEI-LRGEDYGFSVDWWALGVLMFEMMAGRSP 205
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 96/218 (44%), Gaps = 21/218 (9%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAP-TVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
+G+ G++Y+ V +G P T VA++ + E + +F +E + ++V
Sbjct: 24 LGQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 82
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDS-----LPPLPWEARLKIAQGTARGL 463
RL L+I + + G L + L + + L P +++A A G+
Sbjct: 83 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 142
Query: 464 MYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSR 523
Y++ K+VH ++ + ++ ++ I FG+ R + T K G G
Sbjct: 143 AYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG------GKG-- 191
Query: 524 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT 561
+ +++PE+ G FT DV+SFG+VL EI T
Sbjct: 192 --LLPVRWMSPESLKDGV-FTTYSDVWSFGVVLWEIAT 226
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 109/250 (43%), Gaps = 34/250 (13%)
Query: 317 VTDEEEGQKGKFFIIDEGFSLELEDLLRASAYV-VGKSKNGIMYKVVVGRGSGMGAPTVV 375
V E+ + ++D+G + L +YV +G+ GI V + R G V
Sbjct: 24 VVTHEQFKAALRMVVDQG-----DPRLLLDSYVKIGEGSTGI---VCLAREKHSGRQVAV 75
Query: 376 AVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAA 435
+ L + R + +EV + QH N+V + Y +E ++ +F++ G+L
Sbjct: 76 KMMDLRKQQ---RRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDI 132
Query: 436 LHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCIS 495
+ S L E + + + L Y+H + +H +IKS ILL + +S
Sbjct: 133 V------SQVRLNEEQIATVCEAVLQALAYLH---AQGVIHRDIKSDSILLTLDGRVKLS 183
Query: 496 GFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIV 555
FG + + V K + +V GT ++APE I S + + D++S GI+
Sbjct: 184 DFGFCAQI--SKDVPKRKXLV--GT--------PYWMAPEV-ISRSLYATEVDIWSLGIM 230
Query: 556 LLEILTGRLP 565
++E++ G P
Sbjct: 231 VIEMVDGEPP 240
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 96/218 (44%), Gaps = 21/218 (9%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAP-TVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
+G+ G++Y+ V +G P T VA++ + E + +F +E + ++V
Sbjct: 26 LGQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 84
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDS-----LPPLPWEARLKIAQGTARGL 463
RL L+I + + G L + L + + L P +++A A G+
Sbjct: 85 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 464 MYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSR 523
Y++ K+VH ++ + ++ ++ I FG+ R + T K G G
Sbjct: 145 AYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG------GKG-- 193
Query: 524 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT 561
+ +++PE+ G FT DV+SFG+VL EI T
Sbjct: 194 --LLPVRWMSPESLKDGV-FTTYSDVWSFGVVLWEIAT 228
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 96/218 (44%), Gaps = 21/218 (9%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAP-TVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
+G+ G++Y+ V +G P T VA++ + E + +F +E + ++V
Sbjct: 27 LGQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 85
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDS-----LPPLPWEARLKIAQGTARGL 463
RL L+I + + G L + L + + L P +++A A G+
Sbjct: 86 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 464 MYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSR 523
Y++ K+VH ++ + ++ ++ I FG+ R + T K G G
Sbjct: 146 AYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG------GKG-- 194
Query: 524 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT 561
+ +++PE+ G FT DV+SFG+VL EI T
Sbjct: 195 --LLPVRWMSPESLKDGV-FTTYSDVWSFGVVLWEIAT 229
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 96/218 (44%), Gaps = 21/218 (9%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAP-TVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
+G+ G++Y+ V +G P T VA++ + E + +F +E + ++V
Sbjct: 26 LGQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 84
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDS-----LPPLPWEARLKIAQGTARGL 463
RL L+I + + G L + L + + L P +++A A G+
Sbjct: 85 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 464 MYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSR 523
Y++ K+VH ++ + ++ ++ I FG+ R + T K G G
Sbjct: 145 AYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG------GKG-- 193
Query: 524 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT 561
+ +++PE+ G FT DV+SFG+VL EI T
Sbjct: 194 --LLPVRWMSPESLKDGV-FTTYSDVWSFGVVLWEIAT 228
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 81/173 (46%), Gaps = 23/173 (13%)
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLIS-DFIRNGSLYAALHA-GPSDSLPPLPWEAR 452
E + ++R+ HP V+L F + +DEKL + +NG L + G D + A
Sbjct: 82 ERDVMSRLDHPFFVKL-YFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAE 140
Query: 453 LKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKN 512
+ L Y+H + +H ++K ILL++++H I+ FG ++L SK +
Sbjct: 141 I------VSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 191
Query: 513 ETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
+ V GT Y++PE S ++ D+++ G ++ +++ G P
Sbjct: 192 NSFV--GTAQ--------YVSPELLTEKSA-SKSSDLWALGCIIYQLVAGLPP 233
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 127/314 (40%), Gaps = 67/314 (21%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRR----LTEGDATWRFKDFESEVEAIARVQH 404
V+GK G KV++ R G V V + L + D E + ++AR H
Sbjct: 30 VLGKGSFG---KVMLARVKETGDLYAVKVLKKDVILQDDDVECTMT--EKRILSLAR-NH 83
Query: 405 PNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKI-AQGTARGL 463
P + +L + D + +F+ G L H S EAR + A L
Sbjct: 84 PFLTQLFCCFQTPDRLFFVMEFVNGGDL--MFHIQKSRRFD----EARARFYAAEIISAL 137
Query: 464 MYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSR 523
M++H+ + ++ ++K +LLD E H ++ FG+ + E I T +
Sbjct: 138 MFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCK-----------EGICNGVTTAT 183
Query: 524 ISAISNVYLAPE---ARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESL- 579
+ Y+APE +YG D ++ G++L E+L G P EN+ E++
Sbjct: 184 FCGTPD-YIAPEILQEMLYGPA----VDWWAMGVLLYEMLCGHAPFEA-ENEDDLFEAIL 237
Query: 580 ----------------VRKAFRERRP------LSEVIDPALVKEIHAKRQVLATFHIALN 617
+ K+F + P L++ + A+++ K A LN
Sbjct: 238 NDEVVYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEIDWAQ----LN 293
Query: 618 CTELDPEFRPRMRT 631
+++P FRPR+++
Sbjct: 294 HRQIEPPFRPRIKS 307
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 96/220 (43%), Gaps = 35/220 (15%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRL-----TEGDATWRFKDFESEVEAIARVQH 404
+G+ G++YK R G VVA++++ TEG + + E+ + + H
Sbjct: 15 IGEGTYGVVYK---ARNKLTGE--VVALKKIRLDTETEGVPSTAIR----EISLLKELNH 65
Query: 405 PNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLP-PLPWEARLKIAQGTARGL 463
PNIV+L + ++ L+ +F+ L + A +P PL ++ QG A
Sbjct: 66 PNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA--- 121
Query: 464 MYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSR 523
+ H + + +H ++K +L++ E ++ FGL R G T +VT
Sbjct: 122 -FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLW---- 172
Query: 524 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
Y APE + ++ D++S G + E++T R
Sbjct: 173 -------YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 88/216 (40%), Gaps = 26/216 (12%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK K G +Y + + A V+ +L + + + EVE + ++HPNI+R
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR---REVEIQSHLRHPNILR 75
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEY 469
L +++ LI ++ G++Y L L + A L Y H
Sbjct: 76 LYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTATYITELANALSYCHS- 129
Query: 470 SPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISN 529
++ +H +IK +LL I+ FG + P + + T+
Sbjct: 130 --KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTL-------------- 173
Query: 530 VYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
YL PE I G +K D++S G++ E L G+ P
Sbjct: 174 DYLPPEM-IEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 96/218 (44%), Gaps = 21/218 (9%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAP-TVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
+G+ G++Y+ V +G P T VA++ + E + +F +E + ++V
Sbjct: 55 LGQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 113
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDS-----LPPLPWEARLKIAQGTARGL 463
RL L+I + + G L + L + + L P +++A A G+
Sbjct: 114 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 173
Query: 464 MYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSR 523
Y++ K+VH ++ + ++ ++ I FG+ R + T K G G
Sbjct: 174 AYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK------GGKG-- 222
Query: 524 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT 561
+ +++PE+ G FT DV+SFG+VL EI T
Sbjct: 223 --LLPVRWMSPESLKDGV-FTTYSDVWSFGVVLWEIAT 257
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 107/238 (44%), Gaps = 29/238 (12%)
Query: 341 DLLRASAYVV-GKSKNGIMYKVVVGRG-----------SGMGAPTVVAVRRLTEGDATWR 388
+L++A +VV G S + + V+GRG G AV+ L
Sbjct: 13 ELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE 72
Query: 389 FKDFESEVEAIARVQHPNIVRLKAFYYAND-EKLLISDFIRNGSLYAALHAGPSDSLPPL 447
F +E + HPN++ L ++ L++ ++++G L + + P +
Sbjct: 73 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PTV 130
Query: 448 PWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTS 507
+ + A+G+ ++ + +K+VH ++ + +LD++ ++ FGL R
Sbjct: 131 --KDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-----D 180
Query: 508 KVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
K V + TG+++ ++A E+ + KFT K DV+SFG++L E++T P
Sbjct: 181 MYDKEFDSVHNKTGAKLPV---KWMALES-LQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 107/238 (44%), Gaps = 29/238 (12%)
Query: 341 DLLRASAYVV-GKSKNGIMYKVVVGRG-----------SGMGAPTVVAVRRLTEGDATWR 388
+L++A +VV G S + + V+GRG G AV+ L
Sbjct: 20 ELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE 79
Query: 389 FKDFESEVEAIARVQHPNIVRLKAFYYAND-EKLLISDFIRNGSLYAALHAGPSDSLPPL 447
F +E + HPN++ L ++ L++ ++++G L + + P +
Sbjct: 80 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PTV 137
Query: 448 PWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTS 507
+ + A+G+ ++ + +K+VH ++ + +LD++ ++ FGL R
Sbjct: 138 --KDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-----D 187
Query: 508 KVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
K V + TG+++ ++A E+ + KFT K DV+SFG++L E++T P
Sbjct: 188 MYDKEFDSVHNKTGAKLPV---KWMALES-LQTQKFTTKSDVWSFGVLLWELMTRGAP 241
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 88/216 (40%), Gaps = 26/216 (12%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK K G +Y + + A V+ +L + + + EVE + ++HPNI+R
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLR---REVEIQSHLRHPNILR 76
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEY 469
L +++ LI ++ G++Y L L + A L Y H
Sbjct: 77 LYGYFHDATRVYLILEYAPLGTVYREL-----QKLSRFDEQRTATYITELANALSYCHS- 130
Query: 470 SPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISN 529
++ +H +IK +LL I+ FG + P + + T T+
Sbjct: 131 --KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLCGTL-------------- 174
Query: 530 VYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
YL PE I G +K D++S G++ E L G P
Sbjct: 175 DYLPPEM-IEGRMHDEKVDLWSLGVLCYEFLVGMPP 209
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 90/223 (40%), Gaps = 28/223 (12%)
Query: 359 YKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ----------HPNIV 408
+ +V G G +AV R+TE + D + V+ ++ H N+V
Sbjct: 8 WDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHE 468
+ + + L ++ G L+ + P +P +A+ Q A G++Y+H
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEP--DAQRFFHQLMA-GVVYLHG 122
Query: 469 YSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAIS 528
H +IK +LLD+ + IS FGL + + E ++ G+
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVF----RYNNRERLLNKMCGTL----- 170
Query: 529 NVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEN 571
Y+APE + DV+S GIVL +L G LP P +
Sbjct: 171 -PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 96/220 (43%), Gaps = 35/220 (15%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRL-----TEGDATWRFKDFESEVEAIARVQH 404
+G+ G++YK R G VVA++++ TEG + + E+ + + H
Sbjct: 18 IGEGTYGVVYK---ARNKLTGE--VVALKKIRLDTETEGVPSTAIR----EISLLKELNH 68
Query: 405 PNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLP-PLPWEARLKIAQGTARGL 463
PNIV+L + ++ L+ +F+ L + A +P PL ++ QG A
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA--- 124
Query: 464 MYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSR 523
+ H + + +H ++K +L++ E ++ FGL R G T +VT
Sbjct: 125 -FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLW---- 175
Query: 524 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
Y APE + ++ D++S G + E++T R
Sbjct: 176 -------YRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 100/222 (45%), Gaps = 31/222 (13%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
V+GK GI+Y G + +A++ + E D+ + + E+ ++H NIV
Sbjct: 29 VLGKGTYGIVYA-----GRDLSNQVRIAIKEIPERDSRYS-QPLHEEIALHKHLKHKNIV 82
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAALHA--GP-SDSLPPLPWEARLKIAQGTARGLMY 465
+ + N + + + GSL A L + GP D+ + + + + GL Y
Sbjct: 83 QYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQIL-----EGLKY 137
Query: 466 IHEYSPRKYVHGNIKSTKILLDDELHPC-ISGFGLNRLLPGTSKVTKNETIVTSGTGSRI 524
+H+ + VH +IK +L++ IS FG ++ L G + T+ T GT
Sbjct: 138 LHD---NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT----GTLQ-- 188
Query: 525 SAISNVYLAPEARIYGSK-FTQKCDVYSFGIVLLEILTGRLP 565
Y+APE G + + + D++S G ++E+ TG+ P
Sbjct: 189 ------YMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPP 224
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 107/238 (44%), Gaps = 29/238 (12%)
Query: 341 DLLRASAYVV-GKSKNGIMYKVVVGRG-----------SGMGAPTVVAVRRLTEGDATWR 388
+L++A +VV G S + + V+GRG G AV+ L
Sbjct: 16 ELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE 75
Query: 389 FKDFESEVEAIARVQHPNIVRLKAFYYAND-EKLLISDFIRNGSLYAALHAGPSDSLPPL 447
F +E + HPN++ L ++ L++ ++++G L + + P +
Sbjct: 76 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PTV 133
Query: 448 PWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTS 507
+ + A+G+ ++ + +K+VH ++ + +LD++ ++ FGL R
Sbjct: 134 --KDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-----D 183
Query: 508 KVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
K V + TG+++ ++A E+ + KFT K DV+SFG++L E++T P
Sbjct: 184 MYDKEFDSVHNKTGAKLPV---KWMALES-LQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 96/220 (43%), Gaps = 35/220 (15%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRL-----TEGDATWRFKDFESEVEAIARVQH 404
+G+ G++YK R G VVA++++ TEG + + E+ + + H
Sbjct: 11 IGEGTYGVVYK---ARNKLTGE--VVALKKIRLDTETEGVPSTAIR----EISLLKELNH 61
Query: 405 PNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLP-PLPWEARLKIAQGTARGL 463
PNIV+L + ++ L+ +F+ L + A +P PL ++ QG A
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA--- 117
Query: 464 MYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSR 523
+ H + + +H ++K +L++ E ++ FGL R G T +VT
Sbjct: 118 -FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLW---- 168
Query: 524 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
Y APE + ++ D++S G + E++T R
Sbjct: 169 -------YRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 96/220 (43%), Gaps = 35/220 (15%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRL-----TEGDATWRFKDFESEVEAIARVQH 404
+G+ G++YK R G VVA++++ TEG + + E+ + + H
Sbjct: 18 IGEGTYGVVYK---ARNKLTGE--VVALKKIRLDTETEGVPSTAIR----EISLLKELNH 68
Query: 405 PNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLP-PLPWEARLKIAQGTARGL 463
PNIV+L + ++ L+ +F+ L + A +P PL ++ QG A
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA--- 124
Query: 464 MYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSR 523
+ H + + +H ++K +L++ E ++ FGL R G T +VT
Sbjct: 125 -FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLW---- 175
Query: 524 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
Y APE + ++ D++S G + E++T R
Sbjct: 176 -------YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 96/220 (43%), Gaps = 35/220 (15%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRL-----TEGDATWRFKDFESEVEAIARVQH 404
+G+ G++YK R G VVA++++ TEG + + E+ + + H
Sbjct: 14 IGEGTYGVVYK---ARNKLTGE--VVALKKIRLDTETEGVPSTAIR----EISLLKELNH 64
Query: 405 PNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLP-PLPWEARLKIAQGTARGL 463
PNIV+L + ++ L+ +F+ L + A +P PL ++ QG A
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLHQ-DLKTFMDASALTGIPLPLIKSYLFQLLQGLA--- 120
Query: 464 MYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSR 523
+ H + + +H ++K +L++ E ++ FGL R G T +VT
Sbjct: 121 -FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLW---- 171
Query: 524 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
Y APE + ++ D++S G + E++T R
Sbjct: 172 -------YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 96/220 (43%), Gaps = 35/220 (15%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRL-----TEGDATWRFKDFESEVEAIARVQH 404
+G+ G++YK R G VVA++++ TEG + + E+ + + H
Sbjct: 12 IGEGTYGVVYK---ARNKLTGE--VVALKKIRLDTETEGVPSTAIR----EISLLKELNH 62
Query: 405 PNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLP-PLPWEARLKIAQGTARGL 463
PNIV+L + ++ L+ +F+ L + A +P PL ++ QG A
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA--- 118
Query: 464 MYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSR 523
+ H + + +H ++K +L++ E ++ FGL R G T +VT
Sbjct: 119 -FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLW---- 169
Query: 524 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
Y APE + ++ D++S G + E++T R
Sbjct: 170 -------YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 86/189 (45%), Gaps = 24/189 (12%)
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLIS-DFIRNGSLYAALHA-GPSDSLPPLPWEAR 452
E + ++R+ HP V+L F + +DEKL + +NG L + G D + A
Sbjct: 82 ERDVMSRLDHPFFVKL-YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 140
Query: 453 LKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKN 512
+ L Y+H + +H ++K ILL++++H I+ FG ++L SK +
Sbjct: 141 I------VSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 191
Query: 513 ETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEND 572
V GT Y++PE S + D+++ G ++ +++ G LP N+
Sbjct: 192 NXFV--GTAQ--------YVSPELLTEKSA-CKSSDLWALGCIIYQLVAG-LPPFRAGNE 239
Query: 573 GKGLESLVR 581
G +++
Sbjct: 240 GLIFAKIIK 248
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 81/181 (44%), Gaps = 29/181 (16%)
Query: 391 DFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWE 450
+ E+E+E + ++ HP I+++K F+ A D +++ + + G L+ + E
Sbjct: 186 NVETEIEILKKLNHPCIIKIKNFFDAEDYYIVL-ELMEGGELFDKVVGNKRLK------E 238
Query: 451 ARLKIA-QGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPC---ISGFGLNRLLPGT 506
A K+ + Y+HE +H ++K +LL + C I+ FG +++L T
Sbjct: 239 ATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 295
Query: 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIY--GSKFTQKCDVYSFGIVLLEILTGRL 564
S + R + YLAPE + + + + D +S G++L L+G
Sbjct: 296 SLM-------------RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYP 342
Query: 565 P 565
P
Sbjct: 343 P 343
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 86/189 (45%), Gaps = 24/189 (12%)
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLIS-DFIRNGSLYAALHA-GPSDSLPPLPWEAR 452
E + ++R+ HP V+L F + +DEKL + +NG L + G D + A
Sbjct: 82 ERDVMSRLDHPFFVKL-YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 140
Query: 453 LKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKN 512
+ L Y+H + +H ++K ILL++++H I+ FG ++L SK +
Sbjct: 141 I------VSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 191
Query: 513 ETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEND 572
V GT Y++PE S + D+++ G ++ +++ G LP N+
Sbjct: 192 NXFV--GTAQ--------YVSPELLTEKSA-XKSSDLWALGCIIYQLVAG-LPPFRAGNE 239
Query: 573 GKGLESLVR 581
G +++
Sbjct: 240 GLIFAKIIK 248
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 107/238 (44%), Gaps = 29/238 (12%)
Query: 341 DLLRASAYVV-GKSKNGIMYKVVVGRG-----------SGMGAPTVVAVRRLTEGDATWR 388
+L++A +VV G S + + V+GRG G AV+ L
Sbjct: 15 ELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE 74
Query: 389 FKDFESEVEAIARVQHPNIVRLKAFYYAND-EKLLISDFIRNGSLYAALHAGPSDSLPPL 447
F +E + HPN++ L ++ L++ ++++G L + + P +
Sbjct: 75 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PTV 132
Query: 448 PWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTS 507
+ + A+G+ ++ + +K+VH ++ + +LD++ ++ FGL R
Sbjct: 133 --KDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-----D 182
Query: 508 KVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
K V + TG+++ ++A E+ + KFT K DV+SFG++L E++T P
Sbjct: 183 MYDKEFDSVHNKTGAKLPV---KWMALES-LQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 96/220 (43%), Gaps = 35/220 (15%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRL-----TEGDATWRFKDFESEVEAIARVQH 404
+G+ G++YK R G VVA++++ TEG + + E+ + + H
Sbjct: 11 IGEGTYGVVYK---ARNKLTGE--VVALKKIRLDTETEGVPSTAIR----EISLLKELNH 61
Query: 405 PNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLP-PLPWEARLKIAQGTARGL 463
PNIV+L + ++ L+ +F+ L + A +P PL ++ QG A
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA--- 117
Query: 464 MYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSR 523
+ H + + +H ++K +L++ E ++ FGL R G T +VT
Sbjct: 118 -FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLW---- 168
Query: 524 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
Y APE + ++ D++S G + E++T R
Sbjct: 169 -------YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 107/238 (44%), Gaps = 29/238 (12%)
Query: 341 DLLRASAYVV-GKSKNGIMYKVVVGRG-----------SGMGAPTVVAVRRLTEGDATWR 388
+L++A +VV G S + + V+GRG G AV+ L
Sbjct: 15 ELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE 74
Query: 389 FKDFESEVEAIARVQHPNIVRLKAFYYAND-EKLLISDFIRNGSLYAALHAGPSDSLPPL 447
F +E + HPN++ L ++ L++ ++++G L + + P +
Sbjct: 75 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PTV 132
Query: 448 PWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTS 507
+ + A+G+ ++ + +K+VH ++ + +LD++ ++ FGL R
Sbjct: 133 --KDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-----D 182
Query: 508 KVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
K V + TG+++ ++A E+ + KFT K DV+SFG++L E++T P
Sbjct: 183 MYDKEFDSVHNKTGAKLPV---KWMALES-LQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 116/285 (40%), Gaps = 54/285 (18%)
Query: 373 TVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLISDFIRNGS 431
VAV+ L + D SE+E + + +H NI+ L + +I + G+
Sbjct: 68 VTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGN 127
Query: 432 LYAALHAGPSDSLPP---------------LPWEARLKIAQGTARGLMYIHEYSPRKYVH 476
L L A PP + ++ + ARG+ Y+ + +K +H
Sbjct: 128 LREYLRA----RRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIH 180
Query: 477 GNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEA 536
++ + +L+ + I+ FGL R + K T R+ ++APEA
Sbjct: 181 RDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT-------TNGRLPV---KWMAPEA 230
Query: 537 RIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAG-PENDGKGLESLVRKAFRERRPLSEVI 594
++ +T + DV+SFG+++ EI T G P G P + L L+++ R +P +
Sbjct: 231 -LFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE---LFKLLKEGHRMDKPAN--- 283
Query: 595 DPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 639
E+ + + +C P RP + + E LDR+
Sbjct: 284 ---CTNEL---------YMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 96/220 (43%), Gaps = 35/220 (15%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRL-----TEGDATWRFKDFESEVEAIARVQH 404
+G+ G++YK R G VVA++++ TEG + + E+ + + H
Sbjct: 11 IGEGTYGVVYK---ARNKLTGE--VVALKKIRLDTETEGVPSTAIR----EISLLKELNH 61
Query: 405 PNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLP-PLPWEARLKIAQGTARGL 463
PNIV+L + ++ L+ +F+ L + A +P PL ++ QG A
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA--- 117
Query: 464 MYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSR 523
+ H + + +H ++K +L++ E ++ FGL R G T +VT
Sbjct: 118 -FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLW---- 168
Query: 524 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
Y APE + ++ D++S G + E++T R
Sbjct: 169 -------YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 96/220 (43%), Gaps = 35/220 (15%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRL-----TEGDATWRFKDFESEVEAIARVQH 404
+G+ G++YK R G VVA++++ TEG + + E+ + + H
Sbjct: 10 IGEGTYGVVYK---ARNKLTGE--VVALKKIRLDTETEGVPSTAIR----EISLLKELNH 60
Query: 405 PNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLP-PLPWEARLKIAQGTARGL 463
PNIV+L + ++ L+ +F+ L + A +P PL ++ QG A
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA--- 116
Query: 464 MYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSR 523
+ H + + +H ++K +L++ E ++ FGL R G T +VT
Sbjct: 117 -FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLW---- 167
Query: 524 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
Y APE + ++ D++S G + E++T R
Sbjct: 168 -------YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 80/173 (46%), Gaps = 23/173 (13%)
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLIS-DFIRNGSLYAALHA-GPSDSLPPLPWEAR 452
E + ++R+ HP V+L F + +DEKL + +NG L + G D + A
Sbjct: 83 ERDVMSRLDHPFFVKL-YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 141
Query: 453 LKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKN 512
+ L Y+H + +H ++K ILL++++H I+ FG ++L SK +
Sbjct: 142 I------VSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 192
Query: 513 ETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
+ V GT Y++PE S + D+++ G ++ +++ G P
Sbjct: 193 NSFV--GTAQ--------YVSPELLTEKSA-CKSSDLWALGCIIYQLVAGLPP 234
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 123/307 (40%), Gaps = 59/307 (19%)
Query: 356 GIMYKVVVGRGSGMGA-----PTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVR 409
G +VV+ G+ VAV+ L + D SE+E + + +H NI+
Sbjct: 46 GAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIN 105
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPP---------------LPWEARLK 454
L + +I + G+L L A PP + ++ +
Sbjct: 106 LLGACTQDGPLYVIVAYASKGNLREYLRA----RRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 455 IAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNET 514
ARG+ Y+ + +K +H ++ + +L+ + I+ FGL R + K
Sbjct: 162 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT-- 216
Query: 515 IVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAG-PEND 572
T R+ ++APEA ++ +T + DV+SFG+++ EI T G P G P +
Sbjct: 217 -----TNGRLPV---KWMAPEA-LFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267
Query: 573 GKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTV 632
L L+++ R +P + E+ + + +C P RP + +
Sbjct: 268 ---LFKLLKEGHRMDKPAN------CTNEL---------YMMMRDCWHAVPSQRPTFKQL 309
Query: 633 SESLDRV 639
E LDR+
Sbjct: 310 VEDLDRI 316
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 100/222 (45%), Gaps = 31/222 (13%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
V+GK GI+Y G + +A++ + E D+ + + E+ ++H NIV
Sbjct: 15 VLGKGTYGIVYA-----GRDLSNQVRIAIKEIPERDSRYS-QPLHEEIALHKHLKHKNIV 68
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAALHA--GP-SDSLPPLPWEARLKIAQGTARGLMY 465
+ + N + + + GSL A L + GP D+ + + + + GL Y
Sbjct: 69 QYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQIL-----EGLKY 123
Query: 466 IHEYSPRKYVHGNIKSTKILLDDELHPC-ISGFGLNRLLPGTSKVTKNETIVTSGTGSRI 524
+H+ + VH +IK +L++ IS FG ++ L G + T+ T GT
Sbjct: 124 LHD---NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT----GTLQ-- 174
Query: 525 SAISNVYLAPEARIYGSK-FTQKCDVYSFGIVLLEILTGRLP 565
Y+APE G + + + D++S G ++E+ TG+ P
Sbjct: 175 ------YMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPP 210
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 96/220 (43%), Gaps = 35/220 (15%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRL-----TEGDATWRFKDFESEVEAIARVQH 404
+G+ G++YK R G VVA++++ TEG + + E+ + + H
Sbjct: 10 IGEGTYGVVYK---ARNKLTGE--VVALKKIRLDTETEGVPSTAIR----EISLLKELNH 60
Query: 405 PNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLP-PLPWEARLKIAQGTARGL 463
PNIV+L + ++ L+ +F+ L + A +P PL ++ QG A
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA--- 116
Query: 464 MYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSR 523
+ H + + +H ++K +L++ E ++ FGL R G T +VT
Sbjct: 117 -FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLW---- 167
Query: 524 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
Y APE + ++ D++S G + E++T R
Sbjct: 168 -------YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 96/220 (43%), Gaps = 35/220 (15%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRL-----TEGDATWRFKDFESEVEAIARVQH 404
+G+ G++YK R G VVA++++ TEG + + E+ + + H
Sbjct: 14 IGEGTYGVVYK---ARNKLTGE--VVALKKIRLDTETEGVPSTAIR----EISLLKELNH 64
Query: 405 PNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLP-PLPWEARLKIAQGTARGL 463
PNIV+L + ++ L+ +F+ L + A +P PL ++ QG A
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA--- 120
Query: 464 MYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSR 523
+ H + + +H ++K +L++ E ++ FGL R G T +VT
Sbjct: 121 -FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLW---- 171
Query: 524 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
Y APE + ++ D++S G + E++T R
Sbjct: 172 -------YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 75/177 (42%), Gaps = 25/177 (14%)
Query: 393 ESEVEAIARVQ-HPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEA 451
+ E+ A+ + HPNIV+L ++ L+ + + G L+ + S +
Sbjct: 53 QKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASY-- 110
Query: 452 RLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDE---LHPCISGFGLNRLLPGTSK 508
I + + ++H+ VH ++K +L DE L I FG RL P ++
Sbjct: 111 ---IMRKLVSAVSHMHDVG---VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ 164
Query: 509 VTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
K Y APE + + + + CD++S G++L +L+G++P
Sbjct: 165 PLKTPCFTLH------------YAAPEL-LNQNGYDESCDLWSLGVILYTMLSGQVP 208
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 96/220 (43%), Gaps = 35/220 (15%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRL-----TEGDATWRFKDFESEVEAIARVQH 404
+G+ G++YK R G VVA++++ TEG + + E+ + + H
Sbjct: 15 IGEGTYGVVYK---ARNKLTGE--VVALKKIRLDTETEGVPSTAIR----EISLLKELNH 65
Query: 405 PNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLP-PLPWEARLKIAQGTARGL 463
PNIV+L + ++ L+ +F+ L + A +P PL ++ QG A
Sbjct: 66 PNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA--- 121
Query: 464 MYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSR 523
+ H + + +H ++K +L++ E ++ FGL R G T +VT
Sbjct: 122 -FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLW---- 172
Query: 524 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
Y APE + ++ D++S G + E++T R
Sbjct: 173 -------YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 96/220 (43%), Gaps = 35/220 (15%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRL-----TEGDATWRFKDFESEVEAIARVQH 404
+G+ G++YK R G VVA++++ TEG + + E+ + + H
Sbjct: 14 IGEGTYGVVYK---ARNKLTGE--VVALKKIRLDTETEGVPSTAIR----EISLLKELNH 64
Query: 405 PNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLP-PLPWEARLKIAQGTARGL 463
PNIV+L + ++ L+ +F+ L + A +P PL ++ QG A
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA--- 120
Query: 464 MYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSR 523
+ H + + +H ++K +L++ E ++ FGL R G T +VT
Sbjct: 121 -FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLW---- 171
Query: 524 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
Y APE + ++ D++S G + E++T R
Sbjct: 172 -------YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 96/220 (43%), Gaps = 35/220 (15%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRL-----TEGDATWRFKDFESEVEAIARVQH 404
+G+ G++YK R G VVA++++ TEG + + E+ + + H
Sbjct: 13 IGEGTYGVVYK---ARNKLTGE--VVALKKIRLDTETEGVPSTAIR----EISLLKELNH 63
Query: 405 PNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLP-PLPWEARLKIAQGTARGL 463
PNIV+L + ++ L+ +F+ L + A +P PL ++ QG A
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA--- 119
Query: 464 MYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSR 523
+ H + + +H ++K +L++ E ++ FGL R G T +VT
Sbjct: 120 -FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLW---- 170
Query: 524 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
Y APE + ++ D++S G + E++T R
Sbjct: 171 -------YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 94/221 (42%), Gaps = 44/221 (19%)
Query: 362 VVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEV----EAIARVQ-----------HPN 406
V+GRGS V + RL + D + + + E+ E I VQ HP
Sbjct: 59 VIGRGS----YAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPF 114
Query: 407 IVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYI 466
+V L + + + +++ G L H LP AR A+ + L Y+
Sbjct: 115 LVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPE--EHARFYSAE-ISLALNYL 169
Query: 467 HEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNR--LLPGTSKVTKNETIVTSGTGSRI 524
HE R ++ ++K +LLD E H ++ +G+ + L PG + T GT +
Sbjct: 170 HE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT------TSTFCGTPN-- 218
Query: 525 SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
Y+APE + G + D ++ G+++ E++ GR P
Sbjct: 219 ------YIAPEI-LRGEDYGFSVDWWALGVLMFEMMAGRSP 252
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 81/181 (44%), Gaps = 29/181 (16%)
Query: 391 DFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWE 450
+ E+E+E + ++ HP I+++K F+ A D +++ + + G L+ + E
Sbjct: 200 NVETEIEILKKLNHPCIIKIKNFFDAEDYYIVL-ELMEGGELFDKVVGNKRLK------E 252
Query: 451 ARLKIA-QGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPC---ISGFGLNRLLPGT 506
A K+ + Y+HE +H ++K +LL + C I+ FG +++L T
Sbjct: 253 ATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 309
Query: 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIY--GSKFTQKCDVYSFGIVLLEILTGRL 564
S + R + YLAPE + + + + D +S G++L L+G
Sbjct: 310 SLM-------------RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYP 356
Query: 565 P 565
P
Sbjct: 357 P 357
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 96/220 (43%), Gaps = 35/220 (15%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRL-----TEGDATWRFKDFESEVEAIARVQH 404
+G+ G++YK R G VVA++++ TEG + + E+ + + H
Sbjct: 13 IGEGTYGVVYK---ARNKLTGE--VVALKKIRLDTETEGVPSTAIR----EISLLKELNH 63
Query: 405 PNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLP-PLPWEARLKIAQGTARGL 463
PNIV+L + ++ L+ +F+ L + A +P PL ++ QG A
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA--- 119
Query: 464 MYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSR 523
+ H + + +H ++K +L++ E ++ FGL R G T +VT
Sbjct: 120 -FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLW---- 170
Query: 524 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
Y APE + ++ D++S G + E++T R
Sbjct: 171 -------YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 107/238 (44%), Gaps = 29/238 (12%)
Query: 341 DLLRASAYVV-GKSKNGIMYKVVVGRG-----------SGMGAPTVVAVRRLTEGDATWR 388
+L++A +VV G S + + V+GRG G AV+ L
Sbjct: 74 ELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE 133
Query: 389 FKDFESEVEAIARVQHPNIVRLKAFYYAND-EKLLISDFIRNGSLYAALHAGPSDSLPPL 447
F +E + HPN++ L ++ L++ ++++G L + + P +
Sbjct: 134 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PTV 191
Query: 448 PWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTS 507
+ + A+G+ ++ + +K+VH ++ + +LD++ ++ FGL R
Sbjct: 192 --KDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-----D 241
Query: 508 KVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
K V + TG+++ ++A E+ + KFT K DV+SFG++L E++T P
Sbjct: 242 MYDKEFDSVHNKTGAKLPV---KWMALES-LQTQKFTTKSDVWSFGVLLWELMTRGAP 295
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 80/173 (46%), Gaps = 23/173 (13%)
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLIS-DFIRNGSLYAALHA-GPSDSLPPLPWEAR 452
E + ++R+ HP V+L F + +DEKL + +NG L + G D + A
Sbjct: 79 ERDVMSRLDHPFFVKL-YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 137
Query: 453 LKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKN 512
+ L Y+H + +H ++K ILL++++H I+ FG ++L SK +
Sbjct: 138 I------VSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 188
Query: 513 ETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
+ V GT Y++PE S + D+++ G ++ +++ G P
Sbjct: 189 NSFV--GTAQ--------YVSPELLTEKSA-CKSSDLWALGCIIYQLVAGLPP 230
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 96/220 (43%), Gaps = 35/220 (15%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRL-----TEGDATWRFKDFESEVEAIARVQH 404
+G+ G++YK R G VVA++++ TEG + + E+ + + H
Sbjct: 13 IGEGTYGVVYK---ARNKLTGE--VVALKKIRLDTETEGVPSTAIR----EISLLKELNH 63
Query: 405 PNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLP-PLPWEARLKIAQGTARGL 463
PNIV+L + ++ L+ +F+ L + A +P PL ++ QG A
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA--- 119
Query: 464 MYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSR 523
+ H + + +H ++K +L++ E ++ FGL R G T +VT
Sbjct: 120 -FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLW---- 170
Query: 524 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
Y APE + ++ D++S G + E++T R
Sbjct: 171 -------YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 96/220 (43%), Gaps = 35/220 (15%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRL-----TEGDATWRFKDFESEVEAIARVQH 404
+G+ G++YK R G VVA++++ TEG + + E+ + + H
Sbjct: 12 IGEGTYGVVYK---ARNKLTGE--VVALKKIRLDTETEGVPSTAIR----EISLLKELNH 62
Query: 405 PNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLP-PLPWEARLKIAQGTARGL 463
PNIV+L + ++ L+ +F+ L + A +P PL ++ QG A
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA--- 118
Query: 464 MYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSR 523
+ H + + +H ++K +L++ E ++ FGL R G T +VT
Sbjct: 119 -FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLW---- 169
Query: 524 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
Y APE + ++ D++S G + E++T R
Sbjct: 170 -------YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 96/220 (43%), Gaps = 35/220 (15%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRL-----TEGDATWRFKDFESEVEAIARVQH 404
+G+ G++YK R G VVA++++ TEG + + E+ + + H
Sbjct: 11 IGEGTYGVVYK---ARNKLTGE--VVALKKIRLDTETEGVPSTAIR----EISLLKELNH 61
Query: 405 PNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLP-PLPWEARLKIAQGTARGL 463
PNIV+L + ++ L+ +F+ L + A +P PL ++ QG A
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA--- 117
Query: 464 MYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSR 523
+ H + + +H ++K +L++ E ++ FGL R G T +VT
Sbjct: 118 -FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLW---- 168
Query: 524 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
Y APE + ++ D++S G + E++T R
Sbjct: 169 -------YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 81/181 (44%), Gaps = 29/181 (16%)
Query: 391 DFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWE 450
+ E+E+E + ++ HP I+++K F+ A D +++ + + G L+ + E
Sbjct: 67 NVETEIEILKKLNHPCIIKIKNFFDAEDYYIVL-ELMEGGELFDKVVGNKRLK------E 119
Query: 451 ARLKIA-QGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPC---ISGFGLNRLLPGT 506
A K+ + Y+HE +H ++K +LL + C I+ FG +++L T
Sbjct: 120 ATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 176
Query: 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIY--GSKFTQKCDVYSFGIVLLEILTGRL 564
S + R + YLAPE + + + + D +S G++L L+G
Sbjct: 177 SLM-------------RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYP 223
Query: 565 P 565
P
Sbjct: 224 P 224
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 96/220 (43%), Gaps = 35/220 (15%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRL-----TEGDATWRFKDFESEVEAIARVQH 404
+G+ G++YK R G VVA++++ TEG + + E+ + + H
Sbjct: 11 IGEGTYGVVYK---ARNKLTGE--VVALKKIRLDTETEGVPSTAIR----EISLLKELNH 61
Query: 405 PNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLP-PLPWEARLKIAQGTARGL 463
PNIV+L + ++ L+ +F+ L + A +P PL ++ Q GL
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQ----GL 116
Query: 464 MYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSR 523
+ H + + +H ++K +L++ E ++ FGL R G T +VT
Sbjct: 117 SFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLW---- 168
Query: 524 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
Y APE + ++ D++S G + E++T R
Sbjct: 169 -------YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 96/220 (43%), Gaps = 35/220 (15%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRL-----TEGDATWRFKDFESEVEAIARVQH 404
+G+ G++YK R G VVA++++ TEG + + E+ + + H
Sbjct: 12 IGEGTYGVVYK---ARNKLTGE--VVALKKIRLDTETEGVPSTAIR----EISLLKELNH 62
Query: 405 PNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLP-PLPWEARLKIAQGTARGL 463
PNIV+L + ++ L+ +F+ L + A +P PL ++ QG A
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA--- 118
Query: 464 MYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSR 523
+ H + + +H ++K +L++ E ++ FGL R G T +VT
Sbjct: 119 -FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLW---- 169
Query: 524 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
Y APE + ++ D++S G + E++T R
Sbjct: 170 -------YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 96/220 (43%), Gaps = 35/220 (15%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRL-----TEGDATWRFKDFESEVEAIARVQH 404
+G+ G++YK R G VVA++++ TEG + + E+ + + H
Sbjct: 11 IGEGTYGVVYK---ARNKLTGE--VVALKKIRLDTETEGVPSTAIR----EISLLKELNH 61
Query: 405 PNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLP-PLPWEARLKIAQGTARGL 463
PNIV+L + ++ L+ +F+ L + A +P PL ++ QG A
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA--- 117
Query: 464 MYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSR 523
+ H + + +H ++K +L++ E ++ FGL R G T +VT
Sbjct: 118 -FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLW---- 168
Query: 524 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
Y APE + ++ D++S G + E++T R
Sbjct: 169 -------YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 96/220 (43%), Gaps = 35/220 (15%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRL-----TEGDATWRFKDFESEVEAIARVQH 404
+G+ G++YK R G VVA++++ TEG + + E+ + + H
Sbjct: 10 IGEGTYGVVYK---ARNKLTGE--VVALKKIRLDTETEGVPSTAIR----EISLLKELNH 60
Query: 405 PNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLP-PLPWEARLKIAQGTARGL 463
PNIV+L + ++ L+ +F+ L + A +P PL ++ QG A
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA--- 116
Query: 464 MYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSR 523
+ H + + +H ++K +L++ E ++ FGL R G T +VT
Sbjct: 117 -FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLW---- 167
Query: 524 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
Y APE + ++ D++S G + E++T R
Sbjct: 168 -------YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 93/216 (43%), Gaps = 28/216 (12%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
+VG+ +G KV + GA +A ++ E + +D+ E+E +A HP IV
Sbjct: 15 IVGELGDGAFGKVYKAKNKETGA---LAAAKVIETKSEEELEDYIVEIEILATCDHPYIV 71
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHE 468
+L YY + + ++ +F G++ A + P + + L ++H
Sbjct: 72 KLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEP----QIQVVCRQMLEALNFLHS 127
Query: 469 YSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAIS 528
++ +H ++K+ +L+ E ++ FG++ KN R S I
Sbjct: 128 ---KRIIHRDLKAGNVLMTLEGDIRLADFGVS---------AKN----LKTLQKRDSFIG 171
Query: 529 NVY-LAPEA----RIYGSKFTQKCDVYSFGIVLLEI 559
Y +APE + + + K D++S GI L+E+
Sbjct: 172 TPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 207
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 96/220 (43%), Gaps = 35/220 (15%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRL-----TEGDATWRFKDFESEVEAIARVQH 404
+G+ G++YK R G VVA++++ TEG + + E+ + + H
Sbjct: 11 IGEGTYGVVYK---ARNKLTGE--VVALKKIRLDTETEGVPSTAIR----EISLLKELNH 61
Query: 405 PNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLP-PLPWEARLKIAQGTARGL 463
PNIV+L + ++ L+ +F+ L + A +P PL ++ QG A
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA--- 117
Query: 464 MYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSR 523
+ H + + +H ++K +L++ E ++ FGL R G T +VT
Sbjct: 118 -FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLW---- 168
Query: 524 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
Y APE + ++ D++S G + E++T R
Sbjct: 169 -------YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 96/220 (43%), Gaps = 35/220 (15%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRL-----TEGDATWRFKDFESEVEAIARVQH 404
+G+ G++YK R G VVA++++ TEG + + E+ + + H
Sbjct: 11 IGEGTYGVVYK---ARNKLTGE--VVALKKIRLDTETEGVPSTAIR----EISLLKELNH 61
Query: 405 PNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLP-PLPWEARLKIAQGTARGL 463
PNIV+L + ++ L+ +F+ L + A +P PL ++ QG A
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA--- 117
Query: 464 MYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSR 523
+ H + + +H ++K +L++ E ++ FGL R G T +VT
Sbjct: 118 -FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLW---- 168
Query: 524 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
Y APE + ++ D++S G + E++T R
Sbjct: 169 -------YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 81/181 (44%), Gaps = 29/181 (16%)
Query: 391 DFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWE 450
+ E+E+E + ++ HP I+++K F+ A D +++ + + G L+ + E
Sbjct: 61 NVETEIEILKKLNHPCIIKIKNFFDAEDYYIVL-ELMEGGELFDKVVGNKRLK------E 113
Query: 451 ARLKIA-QGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPC---ISGFGLNRLLPGT 506
A K+ + Y+HE +H ++K +LL + C I+ FG +++L T
Sbjct: 114 ATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 170
Query: 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIY--GSKFTQKCDVYSFGIVLLEILTGRL 564
S + R + YLAPE + + + + D +S G++L L+G
Sbjct: 171 SLM-------------RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYP 217
Query: 565 P 565
P
Sbjct: 218 P 218
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 96/220 (43%), Gaps = 35/220 (15%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRL-----TEGDATWRFKDFESEVEAIARVQH 404
+G+ G++YK R G VVA++++ TEG + + E+ + + H
Sbjct: 10 IGEGTYGVVYK---ARNKLTGE--VVALKKIRLDTETEGVPSTAIR----EISLLKELNH 60
Query: 405 PNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLP-PLPWEARLKIAQGTARGL 463
PNIV+L + ++ L+ +F+ L + A +P PL ++ QG A
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA--- 116
Query: 464 MYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSR 523
+ H + + +H ++K +L++ E ++ FGL R G T +VT
Sbjct: 117 -FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLW---- 167
Query: 524 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
Y APE + ++ D++S G + E++T R
Sbjct: 168 -------YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 96/220 (43%), Gaps = 35/220 (15%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRL-----TEGDATWRFKDFESEVEAIARVQH 404
+G+ G++YK R G VVA++++ TEG + + E+ + + H
Sbjct: 12 IGEGTYGVVYK---ARNKLTGE--VVALKKIRLDTETEGVPSTAIR----EISLLKELNH 62
Query: 405 PNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLP-PLPWEARLKIAQGTARGL 463
PNIV+L + ++ L+ +F+ L + A +P PL ++ QG A
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA--- 118
Query: 464 MYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSR 523
+ H + + +H ++K +L++ E ++ FGL R G T +VT
Sbjct: 119 -FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLW---- 169
Query: 524 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
Y APE + ++ D++S G + E++T R
Sbjct: 170 -------YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 96/237 (40%), Gaps = 22/237 (9%)
Query: 355 NGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFY 414
G KV++ R G + + R A +E + +HP + LK +
Sbjct: 15 KGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAF 74
Query: 415 YANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKY 474
+D + ++ G L+ L S AR A+ L Y+H R
Sbjct: 75 QTHDRLCFVMEYANGGELFFHL----SRERVFTEERARFYGAE-IVSALEYLH---SRDV 126
Query: 475 VHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAP 534
V+ +IK ++LD + H I+ FGL + ++ G + + YLAP
Sbjct: 127 VYRDIKLENLMLDKDGHIKITDFGLCK------------EGISDGATMKTFCGTPEYLAP 174
Query: 535 EARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLS 591
E + + + + D + G+V+ E++ GRLP +++ + E ++ + R R LS
Sbjct: 175 EV-LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-RLFELILMEEIRFPRTLS 229
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 123/304 (40%), Gaps = 53/304 (17%)
Query: 356 GIMYKVVVGRGSGMG---APTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLK 411
G KVV G+G A VAV+ L + SE++ ++ + QH NIV L
Sbjct: 42 GAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLL 101
Query: 412 AFYYANDEKLLISDFIRNGSLY------AALHAGPS----------DSLPPLPWEAR--L 453
L+I+++ G L A GPS D P E R L
Sbjct: 102 GACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLL 161
Query: 454 KIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNE 513
+ A+G+ ++ + + +H ++ + +LL + I FGL R + +
Sbjct: 162 HFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR------DIMNDS 212
Query: 514 TIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPEND 572
+ G + + ++APE+ I+ +T + DV+S+GI+L EI + G P G +
Sbjct: 213 NYIVKGN----ARLPVKWMAPES-IFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVN 267
Query: 573 GKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTV 632
K LV+ ++ +P P K I++ Q C L+P RP + +
Sbjct: 268 SK-FYKLVKDGYQMAQP---AFAP---KNIYSIMQA---------CWALEPTHRPTFQQI 311
Query: 633 SESL 636
L
Sbjct: 312 CSFL 315
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 81/181 (44%), Gaps = 29/181 (16%)
Query: 391 DFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWE 450
+ E+E+E + ++ HP I+++K F+ A D +++ + + G L+ + E
Sbjct: 61 NVETEIEILKKLNHPCIIKIKNFFDAEDYYIVL-ELMEGGELFDKVVGNKRLK------E 113
Query: 451 ARLKIA-QGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPC---ISGFGLNRLLPGT 506
A K+ + Y+HE +H ++K +LL + C I+ FG +++L T
Sbjct: 114 ATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 170
Query: 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIY--GSKFTQKCDVYSFGIVLLEILTGRL 564
S + R + YLAPE + + + + D +S G++L L+G
Sbjct: 171 SLM-------------RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYP 217
Query: 565 P 565
P
Sbjct: 218 P 218
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 95/218 (43%), Gaps = 21/218 (9%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAP-TVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
+G+ G++Y+ V +G P T VA++ + E + +F +E + ++V
Sbjct: 20 LGQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 78
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDS-----LPPLPWEARLKIAQGTARGL 463
RL L+I + + G L + L + + L P +++A A G+
Sbjct: 79 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 464 MYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSR 523
Y++ K+VH ++ + + ++ I FG+ R + T K G G
Sbjct: 139 AYLN---ANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKG------GKG-- 187
Query: 524 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT 561
+ +++PE+ G FT DV+SFG+VL EI T
Sbjct: 188 --LLPVRWMSPESLKDGV-FTTYSDVWSFGVVLWEIAT 222
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 72/170 (42%), Gaps = 21/170 (12%)
Query: 403 QHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARG 462
+HP + + + + + +++ G L + + L + A G
Sbjct: 77 EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATF-----YAAEIILG 131
Query: 463 LMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGS 522
L ++H + V+ ++K ILLD + H I+ FG+ + E ++ +
Sbjct: 132 LQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCK-----------ENMLGDAKTN 177
Query: 523 RISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEND 572
+ Y+APE + G K+ D +SFG++L E+L G+ P G + +
Sbjct: 178 EFCGTPD-YIAPEI-LLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE 225
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 96/237 (40%), Gaps = 22/237 (9%)
Query: 355 NGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFY 414
G KV++ R G + + R A +E + +HP + LK +
Sbjct: 15 KGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAF 74
Query: 415 YANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKY 474
+D + ++ G L+ L S AR A+ L Y+H R
Sbjct: 75 QTHDRLCFVMEYANGGELFFHL----SRERVFTEERARFYGAE-IVSALEYLH---SRDV 126
Query: 475 VHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAP 534
V+ +IK ++LD + H I+ FGL + ++ G + + YLAP
Sbjct: 127 VYRDIKLENLMLDKDGHIKITDFGLCK------------EGISDGATMKXFCGTPEYLAP 174
Query: 535 EARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLS 591
E + + + + D + G+V+ E++ GRLP +++ + E ++ + R R LS
Sbjct: 175 EV-LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-RLFELILMEEIRFPRTLS 229
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 81/181 (44%), Gaps = 29/181 (16%)
Query: 391 DFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWE 450
+ E+E+E + ++ HP I+++K F+ A D +++ + + G L+ + E
Sbjct: 61 NVETEIEILKKLNHPCIIKIKNFFDAEDYYIVL-ELMEGGELFDKVVGNKRLK------E 113
Query: 451 ARLKIA-QGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPC---ISGFGLNRLLPGT 506
A K+ + Y+HE +H ++K +LL + C I+ FG +++L T
Sbjct: 114 ATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 170
Query: 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIY--GSKFTQKCDVYSFGIVLLEILTGRL 564
S + R + YLAPE + + + + D +S G++L L+G
Sbjct: 171 SLM-------------RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYP 217
Query: 565 P 565
P
Sbjct: 218 P 218
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 81/181 (44%), Gaps = 29/181 (16%)
Query: 391 DFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWE 450
+ E+E+E + ++ HP I+++K F+ A D +++ + + G L+ + E
Sbjct: 60 NVETEIEILKKLNHPCIIKIKNFFDAEDYYIVL-ELMEGGELFDKVVGNKRLK------E 112
Query: 451 ARLKIA-QGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPC---ISGFGLNRLLPGT 506
A K+ + Y+HE +H ++K +LL + C I+ FG +++L T
Sbjct: 113 ATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 169
Query: 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIY--GSKFTQKCDVYSFGIVLLEILTGRL 564
S + R + YLAPE + + + + D +S G++L L+G
Sbjct: 170 SLM-------------RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYP 216
Query: 565 P 565
P
Sbjct: 217 P 217
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 90/223 (40%), Gaps = 28/223 (12%)
Query: 359 YKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ----------HPNIV 408
+ +V G G +AV R+TE + D + V+ ++ H N+V
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 68
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHE 468
+ + + L ++ G L+ + P +P +A+ Q A G++Y+H
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEP--DAQRFFHQLMA-GVVYLHG 123
Query: 469 YSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAIS 528
H +IK +LLD+ + IS FGL + + E ++ G+
Sbjct: 124 IG---ITHRDIKPENLLLDERDNLKISDFGLATVF----RYNNRERLLNKMCGTL----- 171
Query: 529 NVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEN 571
Y+APE + DV+S GIVL +L G LP P +
Sbjct: 172 -PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 96/237 (40%), Gaps = 22/237 (9%)
Query: 355 NGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFY 414
G KV++ R G + + R A +E + +HP + LK +
Sbjct: 15 KGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAF 74
Query: 415 YANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKY 474
+D + ++ G L+ L S AR A+ L Y+H R
Sbjct: 75 QTHDRLCFVMEYANGGELFFHL----SRERVFTEERARFYGAE-IVSALEYLH---SRDV 126
Query: 475 VHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAP 534
V+ +IK ++LD + H I+ FGL + ++ G + + YLAP
Sbjct: 127 VYRDIKLENLMLDKDGHIKITDFGLCK------------EGISDGATMKTFCGTPEYLAP 174
Query: 535 EARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLS 591
E + + + + D + G+V+ E++ GRLP +++ + E ++ + R R LS
Sbjct: 175 EV-LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-RLFELILMEEIRFPRTLS 229
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 96/237 (40%), Gaps = 22/237 (9%)
Query: 355 NGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFY 414
G KV++ R G + + R A +E + +HP + LK +
Sbjct: 15 KGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAF 74
Query: 415 YANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKY 474
+D + ++ G L+ L S AR A+ L Y+H R
Sbjct: 75 QTHDRLCFVMEYANGGELFFHL----SRERVFTEERARFYGAE-IVSALEYLH---SRDV 126
Query: 475 VHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAP 534
V+ +IK ++LD + H I+ FGL + ++ G + + YLAP
Sbjct: 127 VYRDIKLENLMLDKDGHIKITDFGLCK------------EGISDGATMKXFCGTPEYLAP 174
Query: 535 EARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLS 591
E + + + + D + G+V+ E++ GRLP +++ + E ++ + R R LS
Sbjct: 175 EV-LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-RLFELILMEEIRFPRTLS 229
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 96/238 (40%), Gaps = 24/238 (10%)
Query: 355 NGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFY 414
G KV++ R G + + R A +E + +HP + LK +
Sbjct: 15 KGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAF 74
Query: 415 YANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKI-AQGTARGLMYIHEYSPRK 473
+D + ++ G L+ L S + E R + L Y+H R
Sbjct: 75 QTHDRLCFVMEYANGGELFFHL------SRERVFTEERARFYGAEIVSALEYLH---SRD 125
Query: 474 YVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLA 533
V+ +IK ++LD + H I+ FGL + ++ G + + YLA
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCK------------EGISDGATMKXFCGTPEYLA 173
Query: 534 PEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLS 591
PE + + + + D + G+V+ E++ GRLP +++ + E ++ + R R LS
Sbjct: 174 PEV-LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-RLFELILMEEIRFPRTLS 229
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 96/237 (40%), Gaps = 22/237 (9%)
Query: 355 NGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFY 414
G KV++ R G + + R A +E + +HP + LK +
Sbjct: 18 KGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAF 77
Query: 415 YANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKY 474
+D + ++ G L+ L S AR A+ L Y+H R
Sbjct: 78 QTHDRLCFVMEYANGGELFFHL----SRERVFTEERARFYGAE-IVSALEYLH---SRDV 129
Query: 475 VHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAP 534
V+ +IK ++LD + H I+ FGL + ++ G + + YLAP
Sbjct: 130 VYRDIKLENLMLDKDGHIKITDFGLCK------------EGISDGATMKTFCGTPEYLAP 177
Query: 535 EARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLS 591
E + + + + D + G+V+ E++ GRLP +++ + E ++ + R R LS
Sbjct: 178 EV-LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-RLFELILMEEIRFPRTLS 232
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 90/223 (40%), Gaps = 28/223 (12%)
Query: 359 YKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ----------HPNIV 408
+ +V G G +AV R+TE + D + V+ ++ H N+V
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHE 468
+ + + L ++ G L+ + P +P +A+ Q A G++Y+H
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEP--DAQRFFHQLMA-GVVYLHG 122
Query: 469 YSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAIS 528
H +IK +LLD+ + IS FGL + + E ++ G+
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVF----RYNNRERLLNKMCGTL----- 170
Query: 529 NVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEN 571
Y+APE + DV+S GIVL +L G LP P +
Sbjct: 171 -PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 23/173 (13%)
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLIS-DFIRNGSLYAALHA-GPSDSLPPLPWEAR 452
E + ++R+ HP V+L F + +DEKL + +NG L + G D + A
Sbjct: 80 ERDVMSRLDHPFFVKL-YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 138
Query: 453 LKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKN 512
+ L Y+H + +H ++K ILL++++H I+ FG ++L SK +
Sbjct: 139 I------VSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 189
Query: 513 ETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
V GT Y++PE S + D+++ G ++ +++ G P
Sbjct: 190 NAFV--GTAQ--------YVSPELLTEKSA-CKSSDLWALGCIIYQLVAGLPP 231
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 96/237 (40%), Gaps = 22/237 (9%)
Query: 355 NGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFY 414
G KV++ R G + + R A +E + +HP + LK +
Sbjct: 20 KGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAF 79
Query: 415 YANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKY 474
+D + ++ G L+ L S AR A+ L Y+H R
Sbjct: 80 QTHDRLCFVMEYANGGELFFHL----SRERVFTEERARFYGAE-IVSALEYLH---SRDV 131
Query: 475 VHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAP 534
V+ +IK ++LD + H I+ FGL + ++ G + + YLAP
Sbjct: 132 VYRDIKLENLMLDKDGHIKITDFGLCK------------EGISDGATMKXFCGTPEYLAP 179
Query: 535 EARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLS 591
E + + + + D + G+V+ E++ GRLP +++ + E ++ + R R LS
Sbjct: 180 EV-LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-RLFELILMEEIRFPRTLS 234
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 23/173 (13%)
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLIS-DFIRNGSLYAALHA-GPSDSLPPLPWEAR 452
E + ++R+ HP V+L F + +DEKL + +NG L + G D + A
Sbjct: 58 ERDVMSRLDHPFFVKL-YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 116
Query: 453 LKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKN 512
+ L Y+H + +H ++K ILL++++H I+ FG ++L SK +
Sbjct: 117 I------VSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 167
Query: 513 ETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
V GT Y++PE S + D+++ G ++ +++ G P
Sbjct: 168 NXFV--GTAQ--------YVSPELLTEKSA-CKSSDLWALGCIIYQLVAGLPP 209
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 85/181 (46%), Gaps = 35/181 (19%)
Query: 394 SEVEAIARVQHPNIVRL-KAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLP---PLPW 449
E+ + ++ HPN+V+L + N++ L + ++ ++ GP +P PL
Sbjct: 85 QEIAILKKLDHPNVVKLVEVLDDPNEDHLYM--------VFELVNQGPVMEVPTLKPLSE 136
Query: 450 EARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKV 509
+ Q +G+ Y+H +K +H +IK + +L+ ++ H I+ FG++ G+ +
Sbjct: 137 DQARFYFQDLIKGIEYLHY---QKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDAL 193
Query: 510 TKNETIVTSGTGSRISAISNVYLAPEA-----RIYGSKFTQKCDVYSFGIVLLEILTGRL 564
N T GT + ++APE+ +I+ K DV++ G+ L + G+
Sbjct: 194 LSN----TVGTPA--------FMAPESLSETRKIFSGK---ALDVWAMGVTLYCFVFGQC 238
Query: 565 P 565
P
Sbjct: 239 P 239
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 23/173 (13%)
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLIS-DFIRNGSLYAALHA-GPSDSLPPLPWEAR 452
E + ++R+ HP V+L F + +DEKL + +NG L + G D + A
Sbjct: 57 ERDVMSRLDHPFFVKL-YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 115
Query: 453 LKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKN 512
+ L Y+H + +H ++K ILL++++H I+ FG ++L SK +
Sbjct: 116 I------VSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 166
Query: 513 ETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
V GT Y++PE S + D+++ G ++ +++ G P
Sbjct: 167 NXFV--GTAQ--------YVSPELLTEKSA-CKSSDLWALGCIIYQLVAGLPP 208
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 23/173 (13%)
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLIS-DFIRNGSLYAALHA-GPSDSLPPLPWEAR 452
E + ++R+ HP V+L F + +DEKL + +NG L + G D + A
Sbjct: 80 ERDVMSRLDHPFFVKL-YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 138
Query: 453 LKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKN 512
+ L Y+H + +H ++K ILL++++H I+ FG ++L SK +
Sbjct: 139 I------VSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 189
Query: 513 ETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
V GT Y++PE S + D+++ G ++ +++ G P
Sbjct: 190 NXFV--GTAQ--------YVSPELLTEKSA-CKSSDLWALGCIIYQLVAGLPP 231
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 90/223 (40%), Gaps = 28/223 (12%)
Query: 359 YKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ----------HPNIV 408
+ +V G G +AV R+TE + D + V+ ++ H N+V
Sbjct: 7 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 66
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHE 468
+ + + L ++ G L+ + P +P +A+ Q A G++Y+H
Sbjct: 67 KFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEP--DAQRFFHQLMA-GVVYLHG 121
Query: 469 YSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAIS 528
H +IK +LLD+ + IS FGL + + E ++ G+
Sbjct: 122 IG---ITHRDIKPENLLLDERDNLKISDFGLATVF----RYNNRERLLNKMCGTL----- 169
Query: 529 NVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEN 571
Y+APE + DV+S GIVL +L G LP P +
Sbjct: 170 -PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 211
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 93/216 (43%), Gaps = 28/216 (12%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
+VG+ +G KV + GA +A ++ E + +D+ E+E +A HP IV
Sbjct: 23 IVGELGDGAFGKVYKAKNKETGA---LAAAKVIETKSEEELEDYIVEIEILATCDHPYIV 79
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHE 468
+L YY + + ++ +F G++ A + P + + L ++H
Sbjct: 80 KLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEP----QIQVVCRQMLEALNFLHS 135
Query: 469 YSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAIS 528
++ +H ++K+ +L+ E ++ FG++ KN R S I
Sbjct: 136 ---KRIIHRDLKAGNVLMTLEGDIRLADFGVS---------AKN----LKTLQKRDSFIG 179
Query: 529 NVY-LAPEA----RIYGSKFTQKCDVYSFGIVLLEI 559
Y +APE + + + K D++S GI L+E+
Sbjct: 180 TPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 215
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 90/223 (40%), Gaps = 28/223 (12%)
Query: 359 YKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAI----------ARVQHPNIV 408
+ +V G G +AV R+TE + D + V+ A + H N+V
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVV 68
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHE 468
+ + + L ++ G L+ + P +P +A+ Q A G++Y+H
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEP--DAQRFFHQLMA-GVVYLHG 123
Query: 469 YSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAIS 528
H +IK +LLD+ + IS FGL + + E ++ G+
Sbjct: 124 IG---ITHRDIKPENLLLDERDNLKISDFGLATVF----RYNNRERLLNKMCGTL----- 171
Query: 529 NVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEN 571
Y+APE + DV+S GIVL +L G LP P +
Sbjct: 172 -PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 23/173 (13%)
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLIS-DFIRNGSLYAALHA-GPSDSLPPLPWEAR 452
E + ++R+ HP V+L F + +DEKL + +NG L + G D + A
Sbjct: 87 ERDVMSRLDHPFFVKL-YFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 145
Query: 453 LKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKN 512
+ L Y+H + +H ++K ILL++++H I+ FG ++L SK +
Sbjct: 146 I------VSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 196
Query: 513 ETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
V GT Y++PE S + D+++ G ++ +++ G P
Sbjct: 197 NXFV--GTAQ--------YVSPELLTEKSA-CKSSDLWALGCIIYQLVAGLPP 238
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 23/173 (13%)
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLIS-DFIRNGSLYAALHA-GPSDSLPPLPWEAR 452
E + ++R+ HP V+L F + +DEKL + +NG L + G D + A
Sbjct: 80 ERDVMSRLDHPFFVKL-YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 138
Query: 453 LKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKN 512
+ L Y+H + +H ++K ILL++++H I+ FG ++L SK +
Sbjct: 139 I------VSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 189
Query: 513 ETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
V GT Y++PE S + D+++ G ++ +++ G P
Sbjct: 190 NXFV--GTAQ--------YVSPELLTEKSA-CKSSDLWALGCIIYQLVAGLPP 231
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 23/173 (13%)
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLIS-DFIRNGSLYAALHA-GPSDSLPPLPWEAR 452
E + ++R+ HP V+L F + +DEKL + +NG L + G D + A
Sbjct: 80 ERDVMSRLDHPFFVKL-YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 138
Query: 453 LKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKN 512
+ L Y+H + +H ++K ILL++++H I+ FG ++L SK +
Sbjct: 139 I------VSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 189
Query: 513 ETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
V GT Y++PE S + D+++ G ++ +++ G P
Sbjct: 190 NXFV--GTAQ--------YVSPELLTEKSA-CKSSDLWALGCIIYQLVAGLPP 231
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 90/223 (40%), Gaps = 28/223 (12%)
Query: 359 YKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ----------HPNIV 408
+ +V G G +AV R+TE + D + V+ ++ H N+V
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 68
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHE 468
+ + + L ++ G L+ + P +P +A+ Q A G++Y+H
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEP--DAQRFFHQLMA-GVVYLHG 123
Query: 469 YSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAIS 528
H +IK +LLD+ + IS FGL + + E ++ G+
Sbjct: 124 IG---ITHRDIKPENLLLDERDNLKISDFGLATVF----RYNNRERLLNKMCGTL----- 171
Query: 529 NVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEN 571
Y+APE + DV+S GIVL +L G LP P +
Sbjct: 172 -PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 23/173 (13%)
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLIS-DFIRNGSLYAALHA-GPSDSLPPLPWEAR 452
E + ++R+ HP V+L F + +DEKL + +NG L + G D + A
Sbjct: 82 ERDVMSRLDHPFFVKL-YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 140
Query: 453 LKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKN 512
+ L Y+H + +H ++K ILL++++H I+ FG ++L SK +
Sbjct: 141 I------VSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 191
Query: 513 ETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
V GT Y++PE S + D+++ G ++ +++ G P
Sbjct: 192 NXFV--GTAQ--------YVSPELLTEKSA-CKSSDLWALGCIIYQLVAGLPP 233
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 23/173 (13%)
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLIS-DFIRNGSLYAALHA-GPSDSLPPLPWEAR 452
E + ++R+ HP V+L F + +DEKL + +NG L + G D + A
Sbjct: 59 ERDVMSRLDHPFFVKL-YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 117
Query: 453 LKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKN 512
+ L Y+H + +H ++K ILL++++H I+ FG ++L SK +
Sbjct: 118 I------VSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 168
Query: 513 ETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
V GT Y++PE S + D+++ G ++ +++ G P
Sbjct: 169 NXFV--GTAQ--------YVSPELLTEKSA-CKSSDLWALGCIIYQLVAGLPP 210
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 23/173 (13%)
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLIS-DFIRNGSLYAALHA-GPSDSLPPLPWEAR 452
E + ++R+ HP V+L F + +DEKL + +NG L + G D + A
Sbjct: 83 ERDVMSRLDHPFFVKL-YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 141
Query: 453 LKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKN 512
+ L Y+H + +H ++K ILL++++H I+ FG ++L SK +
Sbjct: 142 I------VSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 192
Query: 513 ETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
V GT Y++PE S + D+++ G ++ +++ G P
Sbjct: 193 NXFV--GTAQ--------YVSPELLTEKSA-CKSSDLWALGCIIYQLVAGLPP 234
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 97/220 (44%), Gaps = 35/220 (15%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRL-----TEGDATWRFKDFESEVEAIARVQH 404
+G+ G++YK R G VVA++++ TEG + + E+ + + H
Sbjct: 14 IGEGTYGVVYK---ARNKLTGE--VVALKKIRLDTETEGVPSTAIR----EISLLKELNH 64
Query: 405 PNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLP-PLPWEARLKIAQGTARGL 463
PNIV+L + ++ L+ +F+ + L + A +P PL ++ QG A
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLA--- 120
Query: 464 MYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSR 523
+ H + + +H ++K +L++ E ++ FGL R G T +VT
Sbjct: 121 -FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLW---- 171
Query: 524 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
Y APE + ++ D++S G + E++T R
Sbjct: 172 -------YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 92/218 (42%), Gaps = 31/218 (14%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRL---TEGDATWRFKDFESEVEAIARVQHPN 406
+G+ G++YK R G + RL TEG + + E+ + + HPN
Sbjct: 11 IGEGTYGVVYK---ARNKLTGEVVALXKIRLDTETEGVPSTAIR----EISLLKELNHPN 63
Query: 407 IVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLP-PLPWEARLKIAQGTARGLMY 465
IV+L + ++ L+ +F+ L + A +P PL ++ QG A +
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA----F 118
Query: 466 IHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRIS 525
H + + +H ++K +L++ E ++ FGL R G T +VT
Sbjct: 119 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLW------ 168
Query: 526 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
Y APE + ++ D++S G + E++T R
Sbjct: 169 -----YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 23/173 (13%)
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLIS-DFIRNGSLYAALHA-GPSDSLPPLPWEAR 452
E + ++R+ HP V+L F + +DEKL + +NG L + G D + A
Sbjct: 60 ERDVMSRLDHPFFVKL-YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 118
Query: 453 LKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKN 512
+ L Y+H + +H ++K ILL++++H I+ FG ++L SK +
Sbjct: 119 I------VSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 169
Query: 513 ETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
V GT Y++PE S + D+++ G ++ +++ G P
Sbjct: 170 NXFV--GTAQ--------YVSPELLTEKSA-CKSSDLWALGCIIYQLVAGLPP 211
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 92/218 (42%), Gaps = 31/218 (14%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRL---TEGDATWRFKDFESEVEAIARVQHPN 406
+G+ G++YK R G + RL TEG + + E+ + + HPN
Sbjct: 10 IGEGTYGVVYK---ARNKLTGEVVALXKIRLDTETEGVPSTAIR----EISLLKELNHPN 62
Query: 407 IVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLP-PLPWEARLKIAQGTARGLMY 465
IV+L + ++ L+ +F+ L + A +P PL ++ QG A +
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA----F 117
Query: 466 IHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRIS 525
H + + +H ++K +L++ E ++ FGL R G T +VT
Sbjct: 118 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLW------ 167
Query: 526 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
Y APE + ++ D++S G + E++T R
Sbjct: 168 -----YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 96/220 (43%), Gaps = 35/220 (15%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRL-----TEGDATWRFKDFESEVEAIARVQH 404
+G+ G++YK R G VVA++++ TEG + + E+ + + H
Sbjct: 11 IGEGTYGVVYK---ARNKLTGE--VVALKKIRLDTETEGVPSTAIR----EISLLKELNH 61
Query: 405 PNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLP-PLPWEARLKIAQGTARGL 463
PNIV+L + ++ L+ +F+ L + A +P PL ++ QG A
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQ-DLKDFMDASALTGIPLPLIKSYLFQLLQGLA--- 117
Query: 464 MYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSR 523
+ H + + +H ++K +L++ E ++ FGL R G T +VT
Sbjct: 118 -FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLW---- 168
Query: 524 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
Y APE + ++ D++S G + E++T R
Sbjct: 169 -------YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 23/173 (13%)
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLIS-DFIRNGSLYAALHA-GPSDSLPPLPWEAR 452
E + ++R+ HP V+L F + +DEKL + +NG L + G D + A
Sbjct: 82 ERDVMSRLDHPFFVKL-YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 140
Query: 453 LKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKN 512
+ L Y+H + +H ++K ILL++++H I+ FG ++L SK +
Sbjct: 141 I------VSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 191
Query: 513 ETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
V GT Y++PE S + D+++ G ++ +++ G P
Sbjct: 192 NXFV--GTAQ--------YVSPELLTEKSA-CKSSDLWALGCIIYQLVAGLPP 233
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 91/204 (44%), Gaps = 32/204 (15%)
Query: 362 VVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKL 421
+ G+ + + V++ T+ ++ R EV+ + ++ HPNI +L F+
Sbjct: 49 ITGQECAVKVISKRQVKQKTDKESLLR------EVQLLKQLDHPNIXKLYEFFEDKGYFY 102
Query: 422 LISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKS 481
L+ + G L+ + + S +I + G+ Y H+ K VH ++K
Sbjct: 103 LVGEVYTGGELFDEIISRKRFSEVDAA-----RIIRQVLSGITYXHK---NKIVHRDLKP 154
Query: 482 TKILLDDELHPC---ISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARI 538
+LL+ + I FGL+ + K + I T+ Y+APE +
Sbjct: 155 ENLLLESKSKDANIRIIDFGLSTHFEASKKX--KDKIGTA-----------YYIAPEV-L 200
Query: 539 YGSKFTQKCDVYSFGIVLLEILTG 562
+G+ + +KCDV+S G++L +L+G
Sbjct: 201 HGT-YDEKCDVWSTGVILYILLSG 223
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 90/223 (40%), Gaps = 28/223 (12%)
Query: 359 YKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ----------HPNIV 408
+ +V G G +AV R+TE + D + V+ ++ H N+V
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHE 468
+ + + L ++ G L+ + P +P +A+ Q A G++Y+H
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEP--DAQRFFHQLMA-GVVYLHG 122
Query: 469 YSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAIS 528
H +IK +LLD+ + IS FGL + + E ++ G+
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVF----RYNNRERLLNKMCGTL----- 170
Query: 529 NVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEN 571
Y+APE + DV+S GIVL +L G LP P +
Sbjct: 171 -PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 90/223 (40%), Gaps = 28/223 (12%)
Query: 359 YKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ----------HPNIV 408
+ +V G G +AV R+TE + D + V+ ++ H N+V
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHE 468
+ + + L ++ G L+ + P +P +A+ Q A G++Y+H
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEP--DAQRFFHQLMA-GVVYLHG 122
Query: 469 YSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAIS 528
H +IK +LLD+ + IS FGL + + E ++ G+
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVF----RYNNRERLLNKMCGTL----- 170
Query: 529 NVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEN 571
Y+APE + DV+S GIVL +L G LP P +
Sbjct: 171 -PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 90/223 (40%), Gaps = 28/223 (12%)
Query: 359 YKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ----------HPNIV 408
+ +V G G +AV R+TE + D + V+ ++ H N+V
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 68
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHE 468
+ + + L ++ G L+ + P +P +A+ Q A G++Y+H
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEP--DAQRFFHQLMA-GVVYLHG 123
Query: 469 YSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAIS 528
H +IK +LLD+ + IS FGL + + E ++ G+
Sbjct: 124 IG---ITHRDIKPENLLLDERDNLKISDFGLATVF----RYNNRERLLNKMCGTL----- 171
Query: 529 NVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEN 571
Y+APE + DV+S GIVL +L G LP P +
Sbjct: 172 -PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 90/223 (40%), Gaps = 28/223 (12%)
Query: 359 YKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ----------HPNIV 408
+ +V G G +AV R+TE + D + V+ ++ H N+V
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 68
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHE 468
+ + + L ++ G L+ + P +P +A+ Q A G++Y+H
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEP--DAQRFFHQLMA-GVVYLHG 123
Query: 469 YSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAIS 528
H +IK +LLD+ + IS FGL + + E ++ G+
Sbjct: 124 IG---ITHRDIKPENLLLDERDNLKISDFGLATVF----RYNNRERLLNKMCGTL----- 171
Query: 529 NVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEN 571
Y+APE + DV+S GIVL +L G LP P +
Sbjct: 172 -PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 90/223 (40%), Gaps = 28/223 (12%)
Query: 359 YKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ----------HPNIV 408
+ +V G G +AV R+TE + D + V+ ++ H N+V
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 68
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHE 468
+ + + L ++ G L+ + P +P +A+ Q A G++Y+H
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEP--DAQRFFHQLMA-GVVYLHG 123
Query: 469 YSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAIS 528
H +IK +LLD+ + IS FGL + + E ++ G+
Sbjct: 124 IG---ITHRDIKPENLLLDERDNLKISDFGLATVF----RYNNRERLLNKMCGTL----- 171
Query: 529 NVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEN 571
Y+APE + DV+S GIVL +L G LP P +
Sbjct: 172 -PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 73/170 (42%), Gaps = 21/170 (12%)
Query: 403 QHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARG 462
+HP + + + + + +++ G L + + L + A I G
Sbjct: 76 EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIIL-----G 130
Query: 463 LMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGS 522
L ++H + V+ ++K ILLD + H I+ FG+ + E ++ +
Sbjct: 131 LQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCK-----------ENMLGDAKTN 176
Query: 523 RISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEND 572
+ Y+APE + G K+ D +SFG++L E+L G+ P G + +
Sbjct: 177 XFCGTPD-YIAPEI-LLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE 224
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 23/173 (13%)
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLIS-DFIRNGSLYAALHA-GPSDSLPPLPWEAR 452
E + ++R+ HP V+L F + +DEKL + +NG L + G D + A
Sbjct: 82 ERDVMSRLDHPFFVKL-YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 140
Query: 453 LKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKN 512
+ L Y+H + +H ++K ILL++++H I+ FG ++L SK +
Sbjct: 141 I------VSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 191
Query: 513 ETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
V GT Y++PE S + D+++ G ++ +++ G P
Sbjct: 192 NXFV--GTAQ--------YVSPELLTEKSA-CKSSDLWALGCIIYQLVAGLPP 233
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 90/223 (40%), Gaps = 28/223 (12%)
Query: 359 YKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ----------HPNIV 408
+ +V G G +AV R+TE + D + V+ ++ H N+V
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 68
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHE 468
+ + + L ++ G L+ + P +P +A+ Q A G++Y+H
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEP--DAQRFFHQLMA-GVVYLHG 123
Query: 469 YSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAIS 528
H +IK +LLD+ + IS FGL + + E ++ G+
Sbjct: 124 IG---ITHRDIKPENLLLDERDNLKISDFGLATVF----RYNNRERLLNKMCGTL----- 171
Query: 529 NVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEN 571
Y+APE + DV+S GIVL +L G LP P +
Sbjct: 172 -PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 90/223 (40%), Gaps = 28/223 (12%)
Query: 359 YKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ----------HPNIV 408
+ +V G G +AV R+TE + D + V+ ++ H N+V
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHE 468
+ + + L ++ G L+ + P +P +A+ Q A G++Y+H
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEP--DAQRFFHQLMA-GVVYLHG 122
Query: 469 YSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAIS 528
H +IK +LLD+ + IS FGL + + E ++ G+
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVF----RYNNRERLLNKMCGTL----- 170
Query: 529 NVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEN 571
Y+APE + DV+S GIVL +L G LP P +
Sbjct: 171 -PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 97/220 (44%), Gaps = 35/220 (15%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRL-----TEGDATWRFKDFESEVEAIARVQH 404
+G+ G++YK R G VVA++++ TEG + + E+ + + H
Sbjct: 12 IGEGTYGVVYK---ARNKLTGE--VVALKKIRLDTETEGVPSTAIR----EISLLKELNH 62
Query: 405 PNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLP-PLPWEARLKIAQGTARGL 463
PNIV+L + ++ L+ +F+ + L + A +P PL ++ QG A
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLA--- 118
Query: 464 MYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSR 523
+ H + + +H ++K +L++ E ++ FGL R G T +VT
Sbjct: 119 -FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLW---- 169
Query: 524 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
Y APE + ++ D++S G + E++T R
Sbjct: 170 -------YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 80/182 (43%), Gaps = 22/182 (12%)
Query: 394 SEVEAIARVQHPNIVRLKAFYY------------ANDEKLLIS-DFIRNGSLYAALHAGP 440
SEV +A + H +VR A + L I ++ NG+LY +H+
Sbjct: 51 SEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSEN 110
Query: 441 SDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLN 500
+ W ++ + L YIH + +H ++K I +D+ + I FGL
Sbjct: 111 LNQQRDEYW----RLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLA 163
Query: 501 RLLPGTSKVTKNETIVTSGTGSRI-SAI-SNVYLAPEARIYGSKFTQKCDVYSFGIVLLE 558
+ + + + K ++ G+ + SAI + +Y+A E + +K D+YS GI+ E
Sbjct: 164 KNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFE 223
Query: 559 IL 560
++
Sbjct: 224 MI 225
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 89/187 (47%), Gaps = 18/187 (9%)
Query: 375 VAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA 434
VA++ L +G ++ E + + ++ +P IVRL A + +L+ + G L+
Sbjct: 40 VAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGPLHK 98
Query: 435 ALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCI 494
L G + +P ++ + G+ Y+ E + +VH ++ + +LL + + I
Sbjct: 99 FL-VGKREEIPV---SNVAELLHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKI 151
Query: 495 SGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGI 554
S FGL++ L +++ T+ + + + APE I KF+ + DV+S+G+
Sbjct: 152 SDFGLSKALGA------DDSYYTARSAGKWPL---KWYAPEC-INFRKFSSRSDVWSYGV 201
Query: 555 VLLEILT 561
+ E L+
Sbjct: 202 TMWEALS 208
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 23/173 (13%)
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLIS-DFIRNGSLYAALHA-GPSDSLPPLPWEAR 452
E + ++R+ HP V+L F + +DEKL + +NG L + G D + A
Sbjct: 64 ERDVMSRLDHPFFVKL-YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 122
Query: 453 LKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKN 512
+ L Y+H + +H ++K ILL++++H I+ FG ++L SK +
Sbjct: 123 I------VSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 173
Query: 513 ETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
V GT Y++PE S + D+++ G ++ +++ G P
Sbjct: 174 NXFV--GTAQ--------YVSPELLTEKSA-CKSSDLWALGCIIYQLVAGLPP 215
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 23/173 (13%)
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLIS-DFIRNGSLYAALHA-GPSDSLPPLPWEAR 452
E + ++R+ HP V+L F + +DEKL + +NG L + G D + A
Sbjct: 85 ERDVMSRLDHPFFVKL-YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 143
Query: 453 LKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKN 512
+ L Y+H + +H ++K ILL++++H I+ FG ++L SK +
Sbjct: 144 I------VSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 194
Query: 513 ETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
V GT Y++PE S + D+++ G ++ +++ G P
Sbjct: 195 NXFV--GTAQ--------YVSPELLTEKSA-CKSSDLWALGCIIYQLVAGLPP 236
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 23/173 (13%)
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLIS-DFIRNGSLYAALHA-GPSDSLPPLPWEAR 452
E + ++R+ HP V+L F + +DEKL + +NG L + G D + A
Sbjct: 79 ERDVMSRLDHPFFVKL-YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 137
Query: 453 LKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKN 512
+ L Y+H + +H ++K ILL++++H I+ FG ++L SK +
Sbjct: 138 I------VSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 188
Query: 513 ETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
V GT Y++PE S + D+++ G ++ +++ G P
Sbjct: 189 NXFV--GTAQ--------YVSPELLTEKSA-CKSSDLWALGCIIYQLVAGLPP 230
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 96/224 (42%), Gaps = 37/224 (16%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
VGK + G ++ RGS G VAV+ + D F+ E+E+ ++H NI+
Sbjct: 45 VGKGRYGEVW-----RGSWQGEN--VAVKIFSSRDEKSWFR--ETELYNTVMLRHENILG 95
Query: 410 LKAF----YYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMY 465
A +++ + LI+ + GSLY L D++ + L+I A GL +
Sbjct: 96 FIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTV------SCLRIVLSIASGLAH 149
Query: 466 IH-----EYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
+H H ++KS IL+ CI+ GL V +++
Sbjct: 150 LHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGL--------AVMHSQSTNQLDV 201
Query: 521 GSRISAISNVYLAPEA-----RIYGSKFTQKCDVYSFGIVLLEI 559
G+ + Y+APE ++ ++ D+++FG+VL E+
Sbjct: 202 GNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 90/223 (40%), Gaps = 28/223 (12%)
Query: 359 YKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ----------HPNIV 408
+ +V G G +AV R+TE + D + V+ ++ H N+V
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHE 468
+ + + L ++ G L+ + P +P +A+ Q A G++Y+H
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEP--DAQRFFHQLMA-GVVYLHG 122
Query: 469 YSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAIS 528
H +IK +LLD+ + IS FGL + + E ++ G+
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVF----RYNNRERLLNKMCGTL----- 170
Query: 529 NVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEN 571
Y+APE + DV+S GIVL +L G LP P +
Sbjct: 171 -PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 90/223 (40%), Gaps = 28/223 (12%)
Query: 359 YKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ----------HPNIV 408
+ +V G G +AV R+TE + D + V+ ++ H N+V
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVV 67
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHE 468
+ + + L ++ G L+ + P +P +A+ Q A G++Y+H
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEP--DAQRFFHQLMA-GVVYLHG 122
Query: 469 YSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAIS 528
H +IK +LLD+ + IS FGL + + E ++ G+
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVF----RYNNRERLLNKMCGTL----- 170
Query: 529 NVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEN 571
Y+APE + DV+S GIVL +L G LP P +
Sbjct: 171 -PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 99/228 (43%), Gaps = 45/228 (19%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK + G V G G V V TE +A+W F+ E+E+ ++H NI+
Sbjct: 45 IGKGRYG-----EVWMGKWRGEKVAVKVFFTTE-EASW-FR--ETEIYQTVLMRHENIL- 94
Query: 410 LKAFYYAN-------DEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARG 462
F A+ + LI+D+ NGSLY L + D+ ++ LK+A + G
Sbjct: 95 --GFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDA------KSMLKLAYSSVSG 146
Query: 463 LMYIHE--YSPR---KYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVT 517
L ++H +S + H ++KS IL+ CI+ GL K + V
Sbjct: 147 LCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL------AVKFISDTNEVD 200
Query: 518 SGTGSRISAISNVYLAPEA------RIYGSKFTQKCDVYSFGIVLLEI 559
+R+ + Y+ PE R + + D+YSFG++L E+
Sbjct: 201 IPPNTRVG--TKRYMPPEVLDESLNRNHFQSYIM-ADMYSFGLILWEV 245
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 100/225 (44%), Gaps = 28/225 (12%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLY 433
+VA++ + + + E+E+ + +++HPNIV L Y + LI + G L+
Sbjct: 45 LVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF 104
Query: 434 AALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKIL---LDDEL 490
+ + +A I Q + Y+H+ VH ++K +L LD++
Sbjct: 105 DRI----VEKGFYTERDASRLIFQ-VLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDS 156
Query: 491 HPCISGFGLNRLL-PGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDV 549
IS FGL+++ PG +++++ G + Y+APE + +++ D
Sbjct: 157 KIMISDFGLSKMEDPG--------SVLSTACG------TPGYVAPEV-LAQKPYSKAVDC 201
Query: 550 YSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVI 594
+S G++ +L G P END K E +++ + P + I
Sbjct: 202 WSIGVIAYILLCG-YPPFYDENDAKLFEQILKAEYEFDSPYWDDI 245
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 90/223 (40%), Gaps = 28/223 (12%)
Query: 359 YKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ----------HPNIV 408
+ +V G G +AV R+TE + D + V+ ++ H N+V
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVV 68
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHE 468
+ + + L ++ G L+ + P +P +A+ Q A G++Y+H
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEP--DAQRFFHQLMA-GVVYLHG 123
Query: 469 YSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAIS 528
H +IK +LLD+ + IS FGL + + E ++ G+
Sbjct: 124 IG---ITHRDIKPENLLLDERDNLKISDFGLATVF----RYNNRERLLNKMXGTL----- 171
Query: 529 NVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEN 571
Y+APE + DV+S GIVL +L G LP P +
Sbjct: 172 -PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 90/223 (40%), Gaps = 28/223 (12%)
Query: 359 YKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ----------HPNIV 408
+ +V G G +AV R+TE + D + V+ ++ H N+V
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHE 468
+ + + L ++ G L+ + P +P +A+ Q A G++Y+H
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEP--DAQRFFHQLMA-GVVYLHG 122
Query: 469 YSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAIS 528
H +IK +LLD+ + IS FGL + + E ++ G+
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVF----RYNNRERLLNKMCGTL----- 170
Query: 529 NVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEN 571
Y+APE + DV+S GIVL +L G LP P +
Sbjct: 171 -PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 97/220 (44%), Gaps = 35/220 (15%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRL-----TEGDATWRFKDFESEVEAIARVQH 404
+G+ G++YK R G VVA++++ TEG + + E+ + + H
Sbjct: 14 IGEGTYGVVYK---ARNKLTGE--VVALKKIRLDTETEGVPSTAIR----EISLLKELNH 64
Query: 405 PNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLP-PLPWEARLKIAQGTARGL 463
PNIV+L + ++ L+ +F+ + L + A +P PL ++ QG A
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLA--- 120
Query: 464 MYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSR 523
+ H + + +H ++K +L++ E ++ FGL R G T +VT
Sbjct: 121 -FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLW---- 171
Query: 524 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
Y APE + ++ D++S G + E++T R
Sbjct: 172 -------YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 90/223 (40%), Gaps = 28/223 (12%)
Query: 359 YKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ----------HPNIV 408
+ +V G G +AV R+TE + D + V+ ++ H N+V
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHE 468
+ + + L ++ G L+ + P +P +A+ Q A G++Y+H
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEP--DAQRFFHQLMA-GVVYLHG 122
Query: 469 YSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAIS 528
H +IK +LLD+ + IS FGL + + E ++ G+
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVF----RYNNRERLLNKMXGTL----- 170
Query: 529 NVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEN 571
Y+APE + DV+S GIVL +L G LP P +
Sbjct: 171 -PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 96/224 (42%), Gaps = 37/224 (16%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
VGK + G ++ RGS G VAV+ + D F+ E+E+ ++H NI+
Sbjct: 16 VGKGRYGEVW-----RGSWQGEN--VAVKIFSSRDEKSWFR--ETELYNTVMLRHENILG 66
Query: 410 LKAF----YYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMY 465
A +++ + LI+ + GSLY L D++ + L+I A GL +
Sbjct: 67 FIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTV------SCLRIVLSIASGLAH 120
Query: 466 IH-----EYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
+H H ++KS IL+ CI+ GL V +++
Sbjct: 121 LHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGL--------AVMHSQSTNQLDV 172
Query: 521 GSRISAISNVYLAPEA-----RIYGSKFTQKCDVYSFGIVLLEI 559
G+ + Y+APE ++ ++ D+++FG+VL E+
Sbjct: 173 GNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 96/224 (42%), Gaps = 37/224 (16%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
VGK + G ++ RGS G VAV+ + D F+ E+E+ ++H NI+
Sbjct: 16 VGKGRYGEVW-----RGSWQGEN--VAVKIFSSRDEKSWFR--ETELYNTVMLRHENILG 66
Query: 410 LKAF----YYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMY 465
A +++ + LI+ + GSLY L D++ + L+I A GL +
Sbjct: 67 FIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTV------SCLRIVLSIASGLAH 120
Query: 466 IH-----EYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
+H H ++KS IL+ CI+ GL V +++
Sbjct: 121 LHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGL--------AVMHSQSTNQLDV 172
Query: 521 GSRISAISNVYLAPEA-----RIYGSKFTQKCDVYSFGIVLLEI 559
G+ + Y+APE ++ ++ D+++FG+VL E+
Sbjct: 173 GNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 97/220 (44%), Gaps = 35/220 (15%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRL-----TEGDATWRFKDFESEVEAIARVQH 404
+G+ G++YK R G VVA++++ TEG + + E+ + + H
Sbjct: 13 IGEGTYGVVYK---ARNKLTGE--VVALKKIRLDTETEGVPSTAIR----EISLLKELNH 63
Query: 405 PNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLP-PLPWEARLKIAQGTARGL 463
PNIV+L + ++ L+ +F+ + L + A +P PL ++ QG A
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLA--- 119
Query: 464 MYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSR 523
+ H + + +H ++K +L++ E ++ FGL R G T +VT
Sbjct: 120 -FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLW---- 170
Query: 524 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
Y APE + ++ D++S G + E++T R
Sbjct: 171 -------YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 90/223 (40%), Gaps = 28/223 (12%)
Query: 359 YKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ----------HPNIV 408
+ +V G G +AV R+TE + D + V+ ++ H N+V
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHE 468
+ + + L ++ G L+ + P +P +A+ Q A G++Y+H
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEP--DAQRFFHQLMA-GVVYLHG 122
Query: 469 YSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAIS 528
H +IK +LLD+ + IS FGL + + E ++ G+
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVF----RYNNRERLLNKMXGTL----- 170
Query: 529 NVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEN 571
Y+APE + DV+S GIVL +L G LP P +
Sbjct: 171 -PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 90/223 (40%), Gaps = 28/223 (12%)
Query: 359 YKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ----------HPNIV 408
+ +V G G +AV R+TE + D + V+ ++ H N+V
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVV 67
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHE 468
+ + + L ++ G L+ + P +P +A+ Q A G++Y+H
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEP--DAQRFFHQLMA-GVVYLHG 122
Query: 469 YSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAIS 528
H +IK +LLD+ + IS FGL + + E ++ G+
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVF----RYNNRERLLNKMXGTL----- 170
Query: 529 NVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEN 571
Y+APE + DV+S GIVL +L G LP P +
Sbjct: 171 -PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 90/223 (40%), Gaps = 28/223 (12%)
Query: 359 YKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ----------HPNIV 408
+ +V G G +AV R+TE + D + V+ ++ H N+V
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHE 468
+ + + L ++ G L+ + P +P +A+ Q A G++Y+H
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEP--DAQRFFHQLMA-GVVYLHG 122
Query: 469 YSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAIS 528
H +IK +LLD+ + IS FGL + + E ++ G+
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVF----RYNNRERLLNKMXGTL----- 170
Query: 529 NVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEN 571
Y+APE + DV+S GIVL +L G LP P +
Sbjct: 171 -PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 120/295 (40%), Gaps = 44/295 (14%)
Query: 356 GIMYKVVVGRGSGMG---APTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLK 411
G KVV G+G A VAV+ L + SE++ ++ + QH NIV L
Sbjct: 57 GAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLL 116
Query: 412 AFYYANDEKLLISDFIRNGSLY-------AALHAGPSDSLPPLPWEAR--LKIAQGTARG 462
L+I+++ G L L P+ ++ R L + A+G
Sbjct: 117 GACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQG 176
Query: 463 LMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGS 522
+ ++ + + +H ++ + +LL + I FGL R + + + G
Sbjct: 177 MAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR------DIMNDSNYIVKGNAR 227
Query: 523 RISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVR 581
+ ++APE+ I+ +T + DV+S+GI+L EI + G P G + K LV+
Sbjct: 228 ----LPVKWMAPES-IFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK-FYKLVK 281
Query: 582 KAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESL 636
++ +P P K I++ Q C L+P RP + + L
Sbjct: 282 DGYQMAQP---AFAP---KNIYSIMQA---------CWALEPTHRPTFQQICSFL 321
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 98/220 (44%), Gaps = 28/220 (12%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLY 433
+VA++ + + + E+E+ + +++HPNIV L Y + LI + G L+
Sbjct: 45 LVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF 104
Query: 434 AALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKIL---LDDEL 490
+ + +A I Q + Y+H+ VH ++K +L LD++
Sbjct: 105 DRI----VEKGFYTERDASRLIFQ-VLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDS 156
Query: 491 HPCISGFGLNRLL-PGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDV 549
IS FGL+++ PG +++++ G + Y+APE + +++ D
Sbjct: 157 KIMISDFGLSKMEDPG--------SVLSTACG------TPGYVAPEV-LAQKPYSKAVDC 201
Query: 550 YSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP 589
+S G++ +L G P END K E +++ + P
Sbjct: 202 WSIGVIAYILLCG-YPPFYDENDAKLFEQILKAEYEFDSP 240
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/217 (19%), Positives = 91/217 (41%), Gaps = 32/217 (14%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFE-SEVEAIARVQHPNIV 408
+G+ G+++K R +G +VA+++ E + K E+ + +++HPN+V
Sbjct: 11 IGEGSYGVVFKCR-NRDTGQ----IVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLV 65
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAA---LHAGPSDSLPPLPWEARLKIAQGTARGLMY 465
L + L+ ++ + L+ P + + W+ T + + +
Sbjct: 66 NLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQ--------TLQAVNF 117
Query: 466 IHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRIS 525
H+++ +H ++K IL+ + FG RLL G S +E
Sbjct: 118 CHKHN---CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDE------------ 162
Query: 526 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTG 562
+ Y +PE + +++ DV++ G V E+L+G
Sbjct: 163 VATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 74/169 (43%), Gaps = 23/169 (13%)
Query: 405 PNIVRLKAFYYANDEKLLISDFIRNGSL-YAALHAGPSDSLPPLPWEARLKIAQGTARGL 463
P + +L + + D + +++ G L Y G + + A + I GL
Sbjct: 80 PFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISI------GL 133
Query: 464 MYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSR 523
++H+ R ++ ++K ++LD E H I+ FG+ + + G +R
Sbjct: 134 FFLHK---RGIIYRDLKLDNVMLDSEGHIKIADFGMCK------------EHMMDGVTTR 178
Query: 524 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEND 572
+ Y+APE Y + + D +++G++L E+L G+ P G + D
Sbjct: 179 EFCGTPDYIAPEIIAY-QPYGKSVDWWAYGVLLYEMLAGQPPFDGEDED 226
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 120/295 (40%), Gaps = 44/295 (14%)
Query: 356 GIMYKVVVGRGSGMG---APTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLK 411
G KVV G+G A VAV+ L + SE++ ++ + QH NIV L
Sbjct: 57 GAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLL 116
Query: 412 AFYYANDEKLLISDFIRNGSLY-------AALHAGPSDSLPPLPWEAR--LKIAQGTARG 462
L+I+++ G L L P+ ++ R L + A+G
Sbjct: 117 GACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQG 176
Query: 463 LMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGS 522
+ ++ + + +H ++ + +LL + I FGL R + + + G
Sbjct: 177 MAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR------DIMNDSNYIVKGNAR 227
Query: 523 RISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVR 581
+ ++APE+ I+ +T + DV+S+GI+L EI + G P G + K LV+
Sbjct: 228 ----LPVKWMAPES-IFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK-FYKLVK 281
Query: 582 KAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESL 636
++ +P P K I++ Q C L+P RP + + L
Sbjct: 282 DGYQMAQP---AFAP---KNIYSIMQA---------CWALEPTHRPTFQQICSFL 321
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 98/220 (44%), Gaps = 28/220 (12%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLY 433
+VA++ + + + E+E+ + +++HPNIV L Y + LI + G L+
Sbjct: 45 LVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF 104
Query: 434 AALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKIL---LDDEL 490
+ + +A I Q + Y+H+ VH ++K +L LD++
Sbjct: 105 DRI----VEKGFYTERDASRLIFQ-VLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDS 156
Query: 491 HPCISGFGLNRLL-PGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDV 549
IS FGL+++ PG +++++ G + Y+APE + +++ D
Sbjct: 157 KIMISDFGLSKMEDPG--------SVLSTACG------TPGYVAPEV-LAQKPYSKAVDC 201
Query: 550 YSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP 589
+S G++ +L G P END K E +++ + P
Sbjct: 202 WSIGVIAYILLCG-YPPFYDENDAKLFEQILKAEYEFDSP 240
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 98/220 (44%), Gaps = 28/220 (12%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLY 433
+VA++ + + + E+E+ + +++HPNIV L Y + LI + G L+
Sbjct: 45 LVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF 104
Query: 434 AALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKIL---LDDEL 490
+ + +A I Q + Y+H+ VH ++K +L LD++
Sbjct: 105 DRI----VEKGFYTERDASRLIFQ-VLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDS 156
Query: 491 HPCISGFGLNRLL-PGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDV 549
IS FGL+++ PG +++++ G + Y+APE + +++ D
Sbjct: 157 KIMISDFGLSKMEDPG--------SVLSTACG------TPGYVAPEV-LAQKPYSKAVDC 201
Query: 550 YSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP 589
+S G++ +L G P END K E +++ + P
Sbjct: 202 WSIGVIAYILLCG-YPPFYDENDAKLFEQILKAEYEFDSP 240
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 92/219 (42%), Gaps = 18/219 (8%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV 408
++GK + G +Y GR G A ++ + R E + K F+ EV A + +H N+V
Sbjct: 40 LIGKGRFGQVYH---GRWHGEVAIRLIDIERDNED----QLKAFKREVMAYRQTRHENVV 92
Query: 409 RLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHE 468
+ +I+ + +LY+ + D+ L +IAQ +G+ Y+H
Sbjct: 93 LFMGACMSPPHLAIITSLCKGRTLYSVVR----DAKIVLDVNKTRQIAQEIVKGMGYLH- 147
Query: 469 YSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAIS 528
+ +H ++KS + D+ I+ FGL + G + + E + G
Sbjct: 148 --AKGILHKDLKSKNVFYDNG-KVVITDFGLFS-ISGVLQAGRREDKLRIQNGWLCHLAP 203
Query: 529 NVY--LAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
+ L+P+ F++ DV++ G + E+ P
Sbjct: 204 EIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWP 242
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 85/194 (43%), Gaps = 43/194 (22%)
Query: 393 ESEVEAIARVQHPNIVRLKA----FYY---ANDEKLLISDF----IRNGS------LYAA 435
E EV+A+A++ H NIV F Y +D+ L SD+ +N S L+
Sbjct: 53 EREVKALAKLDHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQ 112
Query: 436 LHAGPSDSLPPLPWEAR---------LKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILL 486
+ +L + R L++ + +G+ YIH +K +H ++K + I L
Sbjct: 113 MEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNIFL 169
Query: 487 DDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQK 546
D I FGL L K T+++ + Y++PE +I + ++
Sbjct: 170 VDTKQVKIGDFGLVTSLKNDGKRTRSKGTLR-------------YMSPE-QISSQDYGKE 215
Query: 547 CDVYSFGIVLLEIL 560
D+Y+ G++L E+L
Sbjct: 216 VDLYALGLILAELL 229
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 95/220 (43%), Gaps = 35/220 (15%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRL-----TEGDATWRFKDFESEVEAIARVQH 404
+G+ G++YK R G VVA++++ TEG + + E+ + + H
Sbjct: 10 IGEGTYGVVYK---ARNKLTGE--VVALKKIRLDTETEGVPSTAIR----EISLLKELNH 60
Query: 405 PNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLP-PLPWEARLKIAQGTARGL 463
PNIV+L + ++ L+ + + L + A +P PL ++ QG A
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEHVHQ-DLKTFMDASALTGIPLPLIKSYLFQLLQGLA--- 116
Query: 464 MYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSR 523
+ H + + +H ++K +L++ E ++ FGL R G T +VT
Sbjct: 117 -FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLW---- 167
Query: 524 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
Y APE + ++ D++S G + E++T R
Sbjct: 168 -------YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 110/259 (42%), Gaps = 38/259 (14%)
Query: 384 DATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAAL-HAGPSD 442
DA R D E++ + ++ HPN+++ A + ++E ++ + G L + H
Sbjct: 72 DAKAR-ADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQK 130
Query: 443 SLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRL 502
L +P K L ++H R+ +H +IK + + + GL R
Sbjct: 131 RL--IPERTVWKYFVQLCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRF 185
Query: 503 LPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTG 562
+SK T ++V GT Y++PE RI+ + + K D++S G +L E+
Sbjct: 186 F--SSKTTAAHSLV--GTP--------YYMSPE-RIHENGYNFKSDIWSLGCLLYEMAAL 232
Query: 563 RLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAK--RQVLATFHIALNCTE 620
+ P G D L SL +K + + P L + +++ RQ++ C
Sbjct: 233 QSPFYG---DKMNLYSLCKK-------IEQCDYPPLPSDHYSEELRQLVNM------CIN 276
Query: 621 LDPEFRPRMRTVSESLDRV 639
DPE RP + V + R+
Sbjct: 277 PDPEKRPDVTYVYDVAKRM 295
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 60/282 (21%), Positives = 113/282 (40%), Gaps = 42/282 (14%)
Query: 363 VGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYA--NDEK 420
+ +G G VV V ++ + +T + +DF E + HPN++ + +
Sbjct: 26 LWKGRWQGNDIVVKVLKVRDW-STRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHP 84
Query: 421 LLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIK 480
LI+ + GSLY LH G + + +K A ARG ++H P H +
Sbjct: 85 TLITHWXPYGSLYNVLHEGTNFVVDQ---SQAVKFALDXARGXAFLHTLEPLIPRHA-LN 140
Query: 481 STKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYG 540
S + +D++ T++++ + + + R A + ++APEA
Sbjct: 141 SRSVXIDED---------------XTARISXADVKFSFQSPGRXYAPA--WVAPEALQKK 183
Query: 541 SKFTQK--CDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPAL 598
+ T + D +SF ++L E++T +P A N G + A RP I P +
Sbjct: 184 PEDTNRRSADXWSFAVLLWELVTREVPFADLSNXEIG----XKVALEGLRP---TIPPGI 236
Query: 599 VKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 640
+ ++ C DP RP+ + L++ +
Sbjct: 237 SPHVSKLXKI---------CXNEDPAKRPKFDXIVPILEKXQ 269
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 95/226 (42%), Gaps = 41/226 (18%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
VGK + G +++ G+ VAV+ + D F+ E+E+ ++H NI+
Sbjct: 16 VGKGRYGEVWR-------GLWHGESVAVKIFSSRDEQSWFR--ETEIYNTVLLRHDNILG 66
Query: 410 LKAFYY----ANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMY 465
A ++ + LI+ + +GSLY L +L P L++A A GL +
Sbjct: 67 FIASDMTSRNSSTQLWLITHYHEHGSLYDFLQ---RQTLEP---HLALRLAVSAACGLAH 120
Query: 466 IH-----EYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
+H H + KS +L+ L CI+ GL + ++ + G
Sbjct: 121 LHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMH------SQGSDYLDIGN 174
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKC-------DVYSFGIVLLEI 559
R+ + Y+APE + + C D+++FG+VL EI
Sbjct: 175 NPRVG--TKRYMAPE--VLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 73/172 (42%), Gaps = 20/172 (11%)
Query: 394 SEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARL 453
+E + +HP + LK + +D + ++ G L+ L S AR
Sbjct: 200 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSED----RARF 255
Query: 454 KIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNE 513
A+ L Y+H S + V+ ++K ++LD + H I+ FGL +
Sbjct: 256 YGAE-IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK------------ 300
Query: 514 TIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
+ G + + YLAPE + + + + D + G+V+ E++ GRLP
Sbjct: 301 EGIKDGATMKTFCGTPEYLAPEV-LEDNDYGRAVDWWGLGVVMYEMMCGRLP 351
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 76/181 (41%), Gaps = 28/181 (15%)
Query: 459 TARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTS 518
ARG+ Y+ E +K+VH ++ + +LD+ ++ FGL R + E S
Sbjct: 133 VARGMEYLAE---QKFVHRDLAARNCMLDESFTVKVADFGLAR------DILDREY--YS 181
Query: 519 GTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLES 578
R + + + A E+ + +FT K DV+SFG++L E+LT P P +
Sbjct: 182 VQQHRHARLPVKWTALES-LQTYRFTTKSDVWSFGVLLWELLTRGAP---PYRHIDPFDL 237
Query: 579 LVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 638
A R P E +L + + C E DP RP R + +++
Sbjct: 238 THFLAQGRRLPQPEYCPDSL-------------YQVMQQCWEADPAVRPTFRVLVGEVEQ 284
Query: 639 V 639
+
Sbjct: 285 I 285
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 96/220 (43%), Gaps = 35/220 (15%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRL-----TEGDATWRFKDFESEVEAIARVQH 404
+G+ G++YK R G VVA++++ TEG + + E+ + + H
Sbjct: 14 IGEGTYGVVYK---ARNKLTGE--VVALKKIRLDTETEGVPSTAIR----EISLLKELNH 64
Query: 405 PNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLP-PLPWEARLKIAQGTARGL 463
PNIV+L + ++ L+ + + + L + A +P PL ++ QG A
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEHV-DQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA--- 120
Query: 464 MYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSR 523
+ H + + +H ++K +L++ E ++ FGL R G T +VT
Sbjct: 121 -FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLW---- 171
Query: 524 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
Y APE + ++ D++S G + E++T R
Sbjct: 172 -------YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 97/238 (40%), Gaps = 33/238 (13%)
Query: 342 LLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLT-----------EGDATWRFK 390
LL+A ++ V G Y+++ G+G A RRLT D K
Sbjct: 41 LLKARSFDV-TFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAK 99
Query: 391 DFESEVEAIARVQHPNIVRLKAFY-----YANDEKLLISDFIRNGSLYAALHAGPSDSLP 445
E++ + +H NI+ +K Y + + + + L+ +H S
Sbjct: 100 RTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIH-----SSQ 154
Query: 446 PLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPG 505
PL E RGL Y+H + +H ++K + +L+++ I FG+ R L
Sbjct: 155 PLTLEHVRYFLYQLLRGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARGL-- 209
Query: 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
+ +++ +T +R Y APE + ++TQ D++S G + E+L R
Sbjct: 210 CTSPAEHQYFMTEYVATRW------YRAPELMLSLHEYTQAIDLWSVGCIFGEMLARR 261
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 77/172 (44%), Gaps = 22/172 (12%)
Query: 394 SEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARL 453
+EV + H N+V + + Y DE ++ +F+ G+L + + E
Sbjct: 91 NEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNE------EQIA 144
Query: 454 KIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNE 513
+ R L Y+H + +H +IKS ILL + +S FG + + +V K +
Sbjct: 145 TVCLSVLRALSYLHN---QGVIHRDIKSDSILLTSDGRIKLSDFGFCAQV--SKEVPKRK 199
Query: 514 TIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
+V GT ++APE I + + D++S GI+++E++ G P
Sbjct: 200 XLV--GT--------PYWMAPEV-ISRLPYGTEVDIWSLGIMVIEMIDGEPP 240
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 73/172 (42%), Gaps = 20/172 (11%)
Query: 394 SEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARL 453
+E + +HP + LK + +D + ++ G L+ L S AR
Sbjct: 197 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSED----RARF 252
Query: 454 KIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNE 513
A+ L Y+H S + V+ ++K ++LD + H I+ FGL +
Sbjct: 253 YGAE-IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK------------ 297
Query: 514 TIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
+ G + + YLAPE + + + + D + G+V+ E++ GRLP
Sbjct: 298 EGIKDGATMKTFCGTPEYLAPEV-LEDNDYGRAVDWWGLGVVMYEMMCGRLP 348
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 78/182 (42%), Gaps = 24/182 (13%)
Query: 392 FESEVEAIARVQHPNIVRLKAFYYANDEK----LLISDFIRNGSLYAALHAGPSDSLPPL 447
F E + A + HP IV + A A ++ +++ +L +H + P+
Sbjct: 59 FRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVH-----TEGPM 113
Query: 448 PWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT- 506
+ +++ + L + H+ +H ++K I++ + FG+ R + +
Sbjct: 114 TPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSG 170
Query: 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPD 566
+ VT+ ++ GT YL+PE + G + DVYS G VL E+LTG P
Sbjct: 171 NSVTQTAAVI--GTAQ--------YLSPE-QARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
Query: 567 AG 568
G
Sbjct: 220 TG 221
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 81/197 (41%), Gaps = 34/197 (17%)
Query: 393 ESEVEAIARVQHPNIVRLKAFYYAND----EKLLISDFIRNGSLYAALHAGPSDSLPPLP 448
E E+ + ++H N+++ A E LI+ F GSL L +
Sbjct: 57 EREIFSTPGMKHENLLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYLKGNI------IT 110
Query: 449 WEARLKIAQGTARGLMYIHEYSPR--------KYVHGNIKSTKILLDDELHPCISGFGLN 500
W +A+ +RGL Y+HE P H + KS +LL +L ++ FGL
Sbjct: 111 WNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLA 170
Query: 501 -RLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQ----KCDVYSFGIV 555
R PG + + G+R Y+APE F + + D+Y+ G+V
Sbjct: 171 VRFEPGKPPGDTHGQV-----GTR------RYMAPEVLEGAINFQRDAFLRIDMYAMGLV 219
Query: 556 LLEILTGRLPDAGPEND 572
L E+++ GP ++
Sbjct: 220 LWELVSRCKAADGPVDE 236
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 80/186 (43%), Gaps = 24/186 (12%)
Query: 392 FESEVEAIARVQHPNIVRL----KAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPL 447
F E + A + HP IV + +A A ++ +++ +L +H + P+
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH-----TEGPM 113
Query: 448 PWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT- 506
+ +++ + L + H+ +H ++K I++ + FG+ R + +
Sbjct: 114 TPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSG 170
Query: 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPD 566
+ VT+ ++ GT YL+PE + G + DVYS G VL E+LTG P
Sbjct: 171 NSVTQTAAVI--GTAQ--------YLSPE-QARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
Query: 567 AGPEND 572
G D
Sbjct: 220 TGDSPD 225
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 84/200 (42%), Gaps = 27/200 (13%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLY 433
+VAV+ + G A ++ + E+ ++HPNIVR K +I ++ G LY
Sbjct: 47 LVAVKYIERGAAI--DENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELY 104
Query: 434 AAL-HAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHP 492
+ +AG EAR Q + G+ Y H + H ++K LLD P
Sbjct: 105 ERICNAGRFSE-----DEARFFFQQLLS-GVSYCHSM---QICHRDLKLENTLLDGSPAP 155
Query: 493 --CISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVY 550
I FG ++ S V ++ T GT + Y+APE + + DV+
Sbjct: 156 RLKICDFGYSK-----SSVLHSQPKSTVGTPA--------YIAPEVLLRQEYDGKIADVW 202
Query: 551 SFGIVLLEILTGRLPDAGPE 570
S G+ L +L G P PE
Sbjct: 203 SCGVTLYVMLVGAYPFEDPE 222
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 97/238 (40%), Gaps = 33/238 (13%)
Query: 342 LLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLT-----------EGDATWRFK 390
LL+A ++ V G Y+++ G+G A RRLT D K
Sbjct: 40 LLKARSFDV-TFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAK 98
Query: 391 DFESEVEAIARVQHPNIVRLKAFY-----YANDEKLLISDFIRNGSLYAALHAGPSDSLP 445
E++ + +H NI+ +K Y + + + + L+ +H S
Sbjct: 99 RTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIH-----SSQ 153
Query: 446 PLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPG 505
PL E RGL Y+H + +H ++K + +L+++ I FG+ R L
Sbjct: 154 PLTLEHVRYFLYQLLRGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARGL-- 208
Query: 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
+ +++ +T +R Y APE + ++TQ D++S G + E+L R
Sbjct: 209 CTSPAEHQYFMTEYVATRW------YRAPELMLSLHEYTQAIDLWSVGCIFGEMLARR 260
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 120/297 (40%), Gaps = 46/297 (15%)
Query: 356 GIMYKVVVGRGSGMG---APTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLK 411
G KVV G+G A VAV+ L + SE++ ++ + QH NIV L
Sbjct: 57 GAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLL 116
Query: 412 AFYYANDEKLLISDFIRNGSLYAALH----AGPSDSLPP-------LPWEARLKIAQGTA 460
L+I+++ G L L G S P L L + A
Sbjct: 117 GACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVA 176
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
+G+ ++ + + +H ++ + +LL + I FGL R + + + G
Sbjct: 177 QGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR------DIMNDSNYIVKGN 227
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESL 579
+ + ++APE+ I+ +T + DV+S+GI+L EI + G P G + K L
Sbjct: 228 ----ARLPVKWMAPES-IFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK-FYKL 281
Query: 580 VRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESL 636
V+ ++ +P P K I++ Q C L+P RP + + L
Sbjct: 282 VKDGYQMAQP---AFAP---KNIYSIMQA---------CWALEPTHRPTFQQICSFL 323
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 82/188 (43%), Gaps = 27/188 (14%)
Query: 390 KDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLP 448
+D E+E + R QHPNI+ LK Y L+++ +R G L + S
Sbjct: 65 RDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFS----E 120
Query: 449 WEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELH--PC--ISGFGLNRLLP 504
EA + + + Y+H + VH ++K + IL DE C I FG + L
Sbjct: 121 REASF-VLHTIGKTVEYLHS---QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLR 176
Query: 505 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRL 564
+N ++T + ++APE + + + CD++S GI+L +L G
Sbjct: 177 A-----ENGLLMT-------PCYTANFVAPEV-LKRQGYDEGCDIWSLGILLYTMLAGYT 223
Query: 565 PDA-GPEN 571
P A GP +
Sbjct: 224 PFANGPSD 231
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 94/216 (43%), Gaps = 28/216 (12%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+G+ GI+ V R SG +VAV+++ R F +EV + QH N+V
Sbjct: 159 IGEGSTGIVCIATV-RSSG----KLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVE 212
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEY 469
+ Y DE ++ +F+ G+L + + E + + L +H
Sbjct: 213 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE------EQIAAVCLAVLQALSVLHAQ 266
Query: 470 SPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISN 529
+H +IKS ILL + +S FG + + +V + + +V GT
Sbjct: 267 G---VIHRDIKSDSILLTHDGRVKLSDFGFCAQV--SKEVPRRKXLV--GT--------P 311
Query: 530 VYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
++APE I + + D++S GI+++E++ G P
Sbjct: 312 YWMAPEL-ISRLPYGPEVDIWSLGIMVIEMVDGEPP 346
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 97/222 (43%), Gaps = 41/222 (18%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRL-----TEGDATWRFKDFESEVEAIARVQH 404
VG+ G++YK +G +VA++R+ EG + + E+ + + H
Sbjct: 29 VGEGTYGVVYKAKDSQGR------IVALKRIRLDAEDEGIPSTAIR----EISLLKELHH 78
Query: 405 PNIVRLKAFYYANDEKLLISDFIRNGSLYAAL---HAGPSDSLPPLPWEARLKIAQGTAR 461
PNIV L ++ L+ +F+ L L G DS + ++ + Q R
Sbjct: 79 PNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDS------QIKIYLYQ-LLR 130
Query: 462 GLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTG 521
G+ + H++ + +H ++K +L++ + ++ FGL R G + +VT
Sbjct: 131 GVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAF-GIPVRSYTHEVVTLW-- 184
Query: 522 SRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
Y AP+ + K++ D++S G + E++TG+
Sbjct: 185 ---------YRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 82/188 (43%), Gaps = 27/188 (14%)
Query: 390 KDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLP 448
+D E+E + R QHPNI+ LK Y L+++ +R G L + S
Sbjct: 65 RDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFS----E 120
Query: 449 WEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELH--PC--ISGFGLNRLLP 504
EA + + + Y+H + VH ++K + IL DE C I FG + L
Sbjct: 121 REASF-VLHTIGKTVEYLHS---QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLR 176
Query: 505 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRL 564
+N ++T + ++APE + + + CD++S GI+L +L G
Sbjct: 177 A-----ENGLLMT-------PCYTANFVAPEV-LKRQGYDEGCDIWSLGILLYTMLAGYT 223
Query: 565 PDA-GPEN 571
P A GP +
Sbjct: 224 PFANGPSD 231
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 76/181 (41%), Gaps = 22/181 (12%)
Query: 392 FESEVEAIARVQHPNIVRL----KAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPL 447
F E + A + HP IV + +A A ++ +++ +L +H + P+
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH-----TEGPM 113
Query: 448 PWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTS 507
+ +++ + L + H+ +H ++K IL+ + FG+ R + S
Sbjct: 114 TPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANILISATNAVKVVDFGIARAI-ADS 169
Query: 508 KVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDA 567
+ +T GT YL+PE + G + DVYS G VL E+LTG P
Sbjct: 170 GNSVXQTAAVIGTAQ--------YLSPE-QARGDSVDARSDVYSLGCVLYEVLTGEPPFT 220
Query: 568 G 568
G
Sbjct: 221 G 221
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 79/182 (43%), Gaps = 24/182 (13%)
Query: 392 FESEVEAIARVQHPNIVRL----KAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPL 447
F E + A + HP IV + +A A ++ +++ +L +H + P+
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH-----TEGPM 113
Query: 448 PWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT- 506
+ +++ + L + H+ +H ++K I++ + FG+ R + +
Sbjct: 114 TPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSG 170
Query: 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPD 566
+ VT+ ++ GT YL+PE + G + DVYS G VL E+LTG P
Sbjct: 171 NSVTQTAAVI--GTAQ--------YLSPE-QARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
Query: 567 AG 568
G
Sbjct: 220 TG 221
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 97/222 (43%), Gaps = 41/222 (18%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRL-----TEGDATWRFKDFESEVEAIARVQH 404
VG+ G++YK +G +VA++R+ EG + + E+ + + H
Sbjct: 29 VGEGTYGVVYKAKDSQGR------IVALKRIRLDAEDEGIPSTAIR----EISLLKELHH 78
Query: 405 PNIVRLKAFYYANDEKLLISDFIRNGSLYAAL---HAGPSDSLPPLPWEARLKIAQGTAR 461
PNIV L ++ L+ +F+ L L G DS + ++ + Q R
Sbjct: 79 PNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDS------QIKIYLYQ-LLR 130
Query: 462 GLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTG 521
G+ + H++ + +H ++K +L++ + ++ FGL R G + +VT
Sbjct: 131 GVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAF-GIPVRSYTHEVVTLW-- 184
Query: 522 SRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
Y AP+ + K++ D++S G + E++TG+
Sbjct: 185 ---------YRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 91/216 (42%), Gaps = 28/216 (12%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+G+ GI+ V R SG +VAV+++ R F +EV + QH N+V
Sbjct: 82 IGEGSTGIVCIATV-RSSG----KLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVE 135
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEY 469
+ Y DE ++ +F+ G+L + + E + + L +H
Sbjct: 136 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE------EQIAAVCLAVLQALSVLHA- 188
Query: 470 SPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISN 529
+ +H +IKS ILL + +S FG + + +V + + +V + IS
Sbjct: 189 --QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQV--SKEVPRRKXLVGTPYWMAPELISR 244
Query: 530 VYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
+ PE D++S GI+++E++ G P
Sbjct: 245 LPYGPE-----------VDIWSLGIMVIEMVDGEPP 269
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 72/172 (41%), Gaps = 20/172 (11%)
Query: 394 SEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARL 453
+E + +HP + LK + +D + ++ G L+ L S AR
Sbjct: 59 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSED----RARF 114
Query: 454 KIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNE 513
A+ L Y+H S + V+ ++K ++LD + H I+ FGL + E
Sbjct: 115 YGAE-IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK-----------E 160
Query: 514 TIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
I T YLAPE + + + + D + G+V+ E++ GRLP
Sbjct: 161 GIKDGATMKXFCGTPE-YLAPEV-LEDNDYGRAVDWWGLGVVMYEMMCGRLP 210
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 72/172 (41%), Gaps = 20/172 (11%)
Query: 394 SEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARL 453
+E + +HP + LK + +D + ++ G L+ L S AR
Sbjct: 57 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSED----RARF 112
Query: 454 KIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNE 513
A+ L Y+H S + V+ ++K ++LD + H I+ FGL + E
Sbjct: 113 YGAE-IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK-----------E 158
Query: 514 TIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
I T YLAPE + + + + D + G+V+ E++ GRLP
Sbjct: 159 GIKDGATMKXFCGTPE-YLAPEV-LEDNDYGRAVDWWGLGVVMYEMMCGRLP 208
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 79/182 (43%), Gaps = 24/182 (13%)
Query: 392 FESEVEAIARVQHPNIVRL----KAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPL 447
F E + A + HP IV + +A A ++ +++ +L +H + P+
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH-----TEGPM 113
Query: 448 PWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT- 506
+ +++ + L + H+ +H ++K I++ + FG+ R + +
Sbjct: 114 TPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSG 170
Query: 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPD 566
+ VT+ ++ GT YL+PE + G + DVYS G VL E+LTG P
Sbjct: 171 NSVTQTAAVI--GTAQ--------YLSPE-QARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
Query: 567 AG 568
G
Sbjct: 220 TG 221
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 72/172 (41%), Gaps = 20/172 (11%)
Query: 394 SEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARL 453
+E + +HP + LK + +D + ++ G L+ L S AR
Sbjct: 58 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSED----RARF 113
Query: 454 KIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNE 513
A+ L Y+H S + V+ ++K ++LD + H I+ FGL + E
Sbjct: 114 YGAE-IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK-----------E 159
Query: 514 TIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
I T YLAPE + + + + D + G+V+ E++ GRLP
Sbjct: 160 GIKDGATMKXFCGTPE-YLAPEV-LEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 18/103 (17%)
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
RGL YIH +H ++K + + ++++ I GFGL R T +E +T
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILGFGLARH-------TDDE--MTGYV 183
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
+R Y APE + + Q D++S G ++ E+LTGR
Sbjct: 184 ATRW------YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 80/186 (43%), Gaps = 30/186 (16%)
Query: 394 SEVEAIARVQHPNIVRLKAFYYA----------------NDEKLLIS-DFIRNGSLYAAL 436
SEV +A + H +VR YYA L I ++ N +LY +
Sbjct: 51 SEVMLLASLNHQYVVR----YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLI 106
Query: 437 HAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISG 496
H+ + W ++ + L YIH + +H ++K I +D+ + I
Sbjct: 107 HSENLNQQRDEYW----RLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGD 159
Query: 497 FGLNRLLPGTSKVTKNETIVTSGTGSRI-SAI-SNVYLAPEARIYGSKFTQKCDVYSFGI 554
FGL + + + + K ++ G+ + SAI + +Y+A E + +K D+YS GI
Sbjct: 160 FGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGI 219
Query: 555 VLLEIL 560
+ E++
Sbjct: 220 IFFEMI 225
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 72/169 (42%), Gaps = 23/169 (13%)
Query: 405 PNIVRLKAFYYANDEKLLISDFIRNGSL-YAALHAGPSDSLPPLPWEARLKIAQGTARGL 463
P + +L + + D + +++ G L Y G + + A + I GL
Sbjct: 402 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAI------GL 455
Query: 464 MYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSR 523
++ + ++ ++K ++LD E H I+ FG+ + + G ++
Sbjct: 456 FFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCK------------ENIWDGVTTK 500
Query: 524 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEND 572
+ Y+APE Y + + D ++FG++L E+L G+ P G + D
Sbjct: 501 XFCGTPDYIAPEIIAY-QPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED 548
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 74/183 (40%), Gaps = 26/183 (14%)
Query: 390 KDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPW 449
+D E EV + +QHPN++ L Y + +LI + + G L+ L S L
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKES-----LTE 113
Query: 450 EARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHP----CISGFGLNRLLPG 505
E + + G+ Y+H + H ++K I+L D P I FGL +
Sbjct: 114 EEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID- 169
Query: 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
NE GT ++APE Y + D++S G++ +L+G P
Sbjct: 170 ----FGNEFKNIFGTPE--------FVAPEIVNY-EPLGLEADMWSIGVITYILLSGASP 216
Query: 566 DAG 568
G
Sbjct: 217 FLG 219
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 111/270 (41%), Gaps = 44/270 (16%)
Query: 359 YKVVVGRGSGMGAPTVVAVRRLTEGDA-TWRFKDF-----------ESEVEAIARVQHPN 406
Y+V+ G+G +RR ++G W+ D+ SEV + ++HPN
Sbjct: 8 YEVLYTIGTG-SYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN 66
Query: 407 IVRLKAFYY------ANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTA 460
IVR YY N ++ ++ G L + + G + L E L++
Sbjct: 67 IVR----YYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKER-QYLDEEFVLRVMTQLT 121
Query: 461 RGLMYIHEYSP--RKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTS 518
L H S +H ++K + LD + + + FGL R+L + K T V
Sbjct: 122 LALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAK--TFV-- 177
Query: 519 GTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAG---PENDGKG 575
GT Y++PE ++ + +K D++S G +L E+ P E GK
Sbjct: 178 GTP--------YYMSPE-QMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKI 228
Query: 576 LESLVRKA-FRERRPLSEVIDPAL-VKEIH 603
E R+ +R L+E+I L +K+ H
Sbjct: 229 REGKFRRIPYRYSDELNEIITRMLNLKDYH 258
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 79/182 (43%), Gaps = 24/182 (13%)
Query: 392 FESEVEAIARVQHPNIVRL----KAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPL 447
F E + A + HP IV + +A A ++ +++ +L +H + P+
Sbjct: 76 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH-----TEGPM 130
Query: 448 PWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT- 506
+ +++ + L + H+ +H ++K I++ + FG+ R + +
Sbjct: 131 TPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSG 187
Query: 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPD 566
+ VT+ ++ GT YL+PE + G + DVYS G VL E+LTG P
Sbjct: 188 NSVTQTAAVI--GTAQ--------YLSPE-QARGDSVDARSDVYSLGCVLYEVLTGEPPF 236
Query: 567 AG 568
G
Sbjct: 237 TG 238
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 98/251 (39%), Gaps = 38/251 (15%)
Query: 390 KDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPW 449
+ F E + + HP+IV+L N +I + G L + L L
Sbjct: 84 EKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYS----LDL 138
Query: 450 EARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKV 509
+ + A + L Y+ +++VH +I + +L+ + FGL+R +
Sbjct: 139 ASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM------ 189
Query: 510 TKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAG 568
++ T + G + ++APE+ I +FT DV+ FG+ + EIL G P G
Sbjct: 190 -EDSTYYKASKGK----LPIKWMAPES-INFRRFTSASDVWMFGVCMWEILMHGVKPFQG 243
Query: 569 PENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPR 628
+N+ + + R ER P+ P L + + C DP RPR
Sbjct: 244 VKNN----DVIGRIENGERLPMPPNCPPTL-------------YSLMTKCWAYDPSRRPR 286
Query: 629 MRTVSESLDRV 639
+ L +
Sbjct: 287 FTELKAQLSTI 297
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 91/216 (42%), Gaps = 28/216 (12%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+G+ GI+ V R SG +VAV+++ R F +EV + QH N+V
Sbjct: 39 IGEGSTGIVCIATV-RSSG----KLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVE 92
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEY 469
+ Y DE ++ +F+ G+L + + E + + L +H
Sbjct: 93 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE------EQIAAVCLAVLQALSVLHA- 145
Query: 470 SPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISN 529
+ +H +IKS ILL + +S FG + + +V + + +V + IS
Sbjct: 146 --QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQV--SKEVPRRKXLVGTPYWMAPELISR 201
Query: 530 VYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
+ PE D++S GI+++E++ G P
Sbjct: 202 LPYGPE-----------VDIWSLGIMVIEMVDGEPP 226
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 98/251 (39%), Gaps = 38/251 (15%)
Query: 390 KDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPW 449
+ F E + + HP+IV+L N +I + G L + L L
Sbjct: 59 EKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYS----LDL 113
Query: 450 EARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKV 509
+ + A + L Y+ +++VH +I + +L+ + FGL+R +
Sbjct: 114 ASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM------ 164
Query: 510 TKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAG 568
++ T + G + ++APE+ I +FT DV+ FG+ + EIL G P G
Sbjct: 165 -EDSTYYKASKGK----LPIKWMAPES-INFRRFTSASDVWMFGVCMWEILMHGVKPFQG 218
Query: 569 PENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPR 628
+N+ + + R ER P+ P L + + C DP RPR
Sbjct: 219 VKNN----DVIGRIENGERLPMPPNCPPTL-------------YSLMTKCWAYDPSRRPR 261
Query: 629 MRTVSESLDRV 639
+ L +
Sbjct: 262 FTELKAQLSTI 272
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 98/251 (39%), Gaps = 38/251 (15%)
Query: 390 KDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPW 449
+ F E + + HP+IV+L N +I + G L + L L
Sbjct: 61 EKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYS----LDL 115
Query: 450 EARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKV 509
+ + A + L Y+ +++VH +I + +L+ + FGL+R +
Sbjct: 116 ASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM------ 166
Query: 510 TKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAG 568
++ T + G + ++APE+ I +FT DV+ FG+ + EIL G P G
Sbjct: 167 -EDSTYYKASKGK----LPIKWMAPES-INFRRFTSASDVWMFGVCMWEILMHGVKPFQG 220
Query: 569 PENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPR 628
+N+ + + R ER P+ P L + + C DP RPR
Sbjct: 221 VKNN----DVIGRIENGERLPMPPNCPPTL-------------YSLMTKCWAYDPSRRPR 263
Query: 629 MRTVSESLDRV 639
+ L +
Sbjct: 264 FTELKAQLSTI 274
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 75/183 (40%), Gaps = 26/183 (14%)
Query: 390 KDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPW 449
+D E EV + +QHPN++ L Y + +LI + + G L+ L S L
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTE 113
Query: 450 EARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHP----CISGFGLNRLLPG 505
E + + G+ Y+H + H ++K I+L D P I FGL +
Sbjct: 114 EEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID- 169
Query: 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
NE GT + ++APE Y + D++S G++ +L+G P
Sbjct: 170 ----FGNEFKNIFGTPA--------FVAPEIVNY-EPLGLEADMWSIGVITYILLSGASP 216
Query: 566 DAG 568
G
Sbjct: 217 FLG 219
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 72/169 (42%), Gaps = 23/169 (13%)
Query: 405 PNIVRLKAFYYANDEKLLISDFIRNGSL-YAALHAGPSDSLPPLPWEARLKIAQGTARGL 463
P + +L + + D + +++ G L Y G + + A + I GL
Sbjct: 81 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAI------GL 134
Query: 464 MYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSR 523
++ + ++ ++K ++LD E H I+ FG+ + + G ++
Sbjct: 135 FFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCK------------ENIWDGVTTK 179
Query: 524 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEND 572
+ Y+APE Y + + D ++FG++L E+L G+ P G + D
Sbjct: 180 XFCGTPDYIAPEIIAY-QPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED 227
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 98/251 (39%), Gaps = 38/251 (15%)
Query: 390 KDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPW 449
+ F E + + HP+IV+L N +I + G L + L L
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYS----LDL 110
Query: 450 EARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKV 509
+ + A + L Y+ +++VH +I + +L+ + FGL+R +
Sbjct: 111 ASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM------ 161
Query: 510 TKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAG 568
++ T + G + ++APE+ I +FT DV+ FG+ + EIL G P G
Sbjct: 162 -EDSTYYKASKGK----LPIKWMAPES-INFRRFTSASDVWMFGVCMWEILMHGVKPFQG 215
Query: 569 PENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPR 628
+N+ + + R ER P+ P L + + C DP RPR
Sbjct: 216 VKNN----DVIGRIENGERLPMPPNCPPTL-------------YSLMTKCWAYDPSRRPR 258
Query: 629 MRTVSESLDRV 639
+ L +
Sbjct: 259 FTELKAQLSTI 269
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 98/251 (39%), Gaps = 38/251 (15%)
Query: 390 KDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPW 449
+ F E + + HP+IV+L N +I + G L + L L
Sbjct: 53 EKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYS----LDL 107
Query: 450 EARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKV 509
+ + A + L Y+ +++VH +I + +L+ + FGL+R +
Sbjct: 108 ASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM------ 158
Query: 510 TKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAG 568
++ T + G + ++APE+ I +FT DV+ FG+ + EIL G P G
Sbjct: 159 -EDSTYYKASKGK----LPIKWMAPES-INFRRFTSASDVWMFGVCMWEILMHGVKPFQG 212
Query: 569 PENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPR 628
+N+ + + R ER P+ P L + + C DP RPR
Sbjct: 213 VKNN----DVIGRIENGERLPMPPNCPPTL-------------YSLMTKCWAYDPSRRPR 255
Query: 629 MRTVSESLDRV 639
+ L +
Sbjct: 256 FTELKAQLSTI 266
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 109/270 (40%), Gaps = 44/270 (16%)
Query: 359 YKVVVGRGSGMGAPTVVAVRRLTEGDA-TWRFKDF-----------ESEVEAIARVQHPN 406
Y+V+ G+G +RR ++G W+ D+ SEV + ++HPN
Sbjct: 8 YEVLYTIGTG-SYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN 66
Query: 407 IVRLKAFYY------ANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTA 460
IVR YY N ++ ++ G L + + G + L E L++
Sbjct: 67 IVR----YYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKER-QYLDEEFVLRVMTQLT 121
Query: 461 RGLMYIHEYSP--RKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTS 518
L H S +H ++K + LD + + + FGL R+L +E
Sbjct: 122 LALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL------NHDEDFAKE 175
Query: 519 GTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAG---PENDGKG 575
G + Y++PE ++ + +K D++S G +L E+ P E GK
Sbjct: 176 FVG------TPYYMSPE-QMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKI 228
Query: 576 LESLVRKA-FRERRPLSEVIDPAL-VKEIH 603
E R+ +R L+E+I L +K+ H
Sbjct: 229 REGKFRRIPYRYSDELNEIITRMLNLKDYH 258
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 75/182 (41%), Gaps = 22/182 (12%)
Query: 394 SEVEAIARVQHPNIVRLKAFYY------------ANDEKLLIS-DFIRNGSLYAALHAGP 440
SEV +A + H +VR A + L I ++ N +LY +H+
Sbjct: 51 SEVXLLASLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSEN 110
Query: 441 SDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLN 500
+ W ++ + L YIH + +H N+K I +D+ + I FGL
Sbjct: 111 LNQQRDEYW----RLFRQILEALSYIH---SQGIIHRNLKPXNIFIDESRNVKIGDFGLA 163
Query: 501 RLLPGTSKVTKNETIVTSGTGSRI-SAISNV-YLAPEARIYGSKFTQKCDVYSFGIVLLE 558
+ + + + K ++ G+ + SAI Y+A E + +K D YS GI+ E
Sbjct: 164 KNVHRSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFE 223
Query: 559 IL 560
+
Sbjct: 224 XI 225
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 91/216 (42%), Gaps = 28/216 (12%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+G+ GI+ V R SG +VAV+++ R F +EV + QH N+V
Sbjct: 37 IGEGSTGIVCIATV-RSSG----KLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVE 90
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEY 469
+ Y DE ++ +F+ G+L + + E + + L +H
Sbjct: 91 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE------EQIAAVCLAVLQALSVLHA- 143
Query: 470 SPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISN 529
+ +H +IKS ILL + +S FG + + +V + + +V + IS
Sbjct: 144 --QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQV--SKEVPRRKXLVGTPYWMAPELISR 199
Query: 530 VYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
+ PE D++S GI+++E++ G P
Sbjct: 200 LPYGPE-----------VDIWSLGIMVIEMVDGEPP 224
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 71/167 (42%), Gaps = 26/167 (15%)
Query: 404 HPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGL 463
HP+I+ L Y ++ L+ D +R G L+ L ++ + E R I + +
Sbjct: 159 HPHIITLIDSYESSSFMFLVFDLMRKGELFDYL----TEKVALSEKETR-SIMRSLLEAV 213
Query: 464 MYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSR 523
++H VH ++K ILLDD + +S FG + L K+ E T G
Sbjct: 214 SFLH---ANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKL--RELCGTPG---- 264
Query: 524 ISAISNVYLAPEARIYGSKFT-----QKCDVYSFGIVLLEILTGRLP 565
YLAPE T ++ D+++ G++L +L G P
Sbjct: 265 -------YLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPP 304
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 74/183 (40%), Gaps = 26/183 (14%)
Query: 390 KDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPW 449
+D E EV + +QHPN++ L Y + +LI + + G L+ L S L
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTE 113
Query: 450 EARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHP----CISGFGLNRLLPG 505
E + + G+ Y+H + H ++K I+L D P I FGL +
Sbjct: 114 EEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID- 169
Query: 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
NE GT ++APE Y + D++S G++ +L+G P
Sbjct: 170 ----FGNEFKNIFGTPE--------FVAPEIVNY-EPLGLEADMWSIGVITYILLSGASP 216
Query: 566 DAG 568
G
Sbjct: 217 FLG 219
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 98/251 (39%), Gaps = 38/251 (15%)
Query: 390 KDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPW 449
+ F E + + HP+IV+L N +I + G L + L L
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKFS----LDL 110
Query: 450 EARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKV 509
+ + A + L Y+ +++VH +I + +L+ + FGL+R +
Sbjct: 111 ASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM------ 161
Query: 510 TKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAG 568
++ T + G + ++APE+ I +FT DV+ FG+ + EIL G P G
Sbjct: 162 -EDSTXXKASKGK----LPIKWMAPES-INFRRFTSASDVWMFGVCMWEILMHGVKPFQG 215
Query: 569 PENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPR 628
+N+ + + R ER P+ P L + + C DP RPR
Sbjct: 216 VKNN----DVIGRIENGERLPMPPNCPPTL-------------YSLMTKCWAYDPSRRPR 258
Query: 629 MRTVSESLDRV 639
+ L +
Sbjct: 259 FTELKAQLSTI 269
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 81/181 (44%), Gaps = 31/181 (17%)
Query: 459 TARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTS 518
A+G+ ++ + + +H ++ + ILL I FGL R + KN++
Sbjct: 177 VAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARHI-------KNDSNYVV 226
Query: 519 GTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLE 577
+R+ ++APE+ I+ +T + DV+S+GI L E+ + G P G D K
Sbjct: 227 KGNARLPV---KWMAPES-IFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK-FY 281
Query: 578 SLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 637
++++ FR P HA ++ + I C + DP RP + + + ++
Sbjct: 282 KMIKEGFRMLSPE------------HAPAEM---YDIMKTCWDADPLKRPTFKQIVQLIE 326
Query: 638 R 638
+
Sbjct: 327 K 327
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 98/251 (39%), Gaps = 38/251 (15%)
Query: 390 KDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPW 449
+ F E + + HP+IV+L N +I + G L + L L
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYS----LDL 110
Query: 450 EARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKV 509
+ + A + L Y+ +++VH +I + +L+ + FGL+R +
Sbjct: 111 ASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM------ 161
Query: 510 TKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAG 568
++ T + G + ++APE+ I +FT DV+ FG+ + EIL G P G
Sbjct: 162 -EDSTYYKASKGK----LPIKWMAPES-INFRRFTSASDVWMFGVCMWEILMHGVKPFQG 215
Query: 569 PENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPR 628
+N+ + + R ER P+ P L + + C DP RPR
Sbjct: 216 VKNN----DVIGRIENGERLPMPPNCPPTL-------------YSLMTKCWAYDPSRRPR 258
Query: 629 MRTVSESLDRV 639
+ L +
Sbjct: 259 FTELKAQLSTI 269
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 98/251 (39%), Gaps = 38/251 (15%)
Query: 390 KDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPW 449
+ F E + + HP+IV+L N +I + G L + L L
Sbjct: 58 EKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYS----LDL 112
Query: 450 EARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKV 509
+ + A + L Y+ +++VH +I + +L+ + FGL+R +
Sbjct: 113 ASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM------ 163
Query: 510 TKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAG 568
++ T + G + ++APE+ I +FT DV+ FG+ + EIL G P G
Sbjct: 164 -EDSTYYKASKGK----LPIKWMAPES-INFRRFTSASDVWMFGVCMWEILMHGVKPFQG 217
Query: 569 PENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPR 628
+N+ + + R ER P+ P L + + C DP RPR
Sbjct: 218 VKNN----DVIGRIENGERLPMPPNCPPTL-------------YSLMTKCWAYDPSRRPR 260
Query: 629 MRTVSESLDRV 639
+ L +
Sbjct: 261 FTELKAQLSTI 271
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 74/183 (40%), Gaps = 26/183 (14%)
Query: 390 KDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPW 449
+D E EV + +QHPN++ L Y + +LI + + G L+ L S L
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTE 113
Query: 450 EARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHP----CISGFGLNRLLPG 505
E + + G+ Y+H + H ++K I+L D P I FGL +
Sbjct: 114 EEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID- 169
Query: 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
NE GT ++APE Y + D++S G++ +L+G P
Sbjct: 170 ----FGNEFKNIFGTPE--------FVAPEIVNY-EPLGLEADMWSIGVITYILLSGASP 216
Query: 566 DAG 568
G
Sbjct: 217 FLG 219
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 109/270 (40%), Gaps = 44/270 (16%)
Query: 359 YKVVVGRGSGMGAPTVVAVRRLTEGDA-TWRFKDF-----------ESEVEAIARVQHPN 406
Y+V+ G+G +RR ++G W+ D+ SEV + ++HPN
Sbjct: 8 YEVLYTIGTG-SYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN 66
Query: 407 IVRLKAFYY------ANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTA 460
IVR YY N ++ ++ G L + + G + L E L++
Sbjct: 67 IVR----YYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKER-QYLDEEFVLRVMTQLT 121
Query: 461 RGLMYIHEYSP--RKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTS 518
L H S +H ++K + LD + + + FGL R+L + K
Sbjct: 122 LALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAK----AFV 177
Query: 519 GTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAG---PENDGKG 575
GT Y++PE ++ + +K D++S G +L E+ P E GK
Sbjct: 178 GTP--------YYMSPE-QMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKI 228
Query: 576 LESLVRKA-FRERRPLSEVIDPAL-VKEIH 603
E R+ +R L+E+I L +K+ H
Sbjct: 229 REGKFRRIPYRYSDELNEIITRMLNLKDYH 258
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 74/183 (40%), Gaps = 26/183 (14%)
Query: 390 KDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPW 449
+D E EV + +QHPN++ L Y + +LI + + G L+ L S L
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTE 113
Query: 450 EARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHP----CISGFGLNRLLPG 505
E + + G+ Y+H + H ++K I+L D P I FGL +
Sbjct: 114 EEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID- 169
Query: 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
NE GT ++APE Y + D++S G++ +L+G P
Sbjct: 170 ----FGNEFKNIFGTPE--------FVAPEIVNY-EPLGLEADMWSIGVITYILLSGASP 216
Query: 566 DAG 568
G
Sbjct: 217 FLG 219
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 74/183 (40%), Gaps = 26/183 (14%)
Query: 390 KDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPW 449
+D E EV + +QHPN++ L Y + +LI + + G L+ L S L
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTE 113
Query: 450 EARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHP----CISGFGLNRLLPG 505
E + + G+ Y+H + H ++K I+L D P I FGL +
Sbjct: 114 EEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID- 169
Query: 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
NE GT ++APE Y + D++S G++ +L+G P
Sbjct: 170 ----FGNEFKNIFGTPE--------FVAPEIVNY-EPLGLEADMWSIGVITYILLSGASP 216
Query: 566 DAG 568
G
Sbjct: 217 FLG 219
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 74/183 (40%), Gaps = 26/183 (14%)
Query: 390 KDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPW 449
+D E EV + +QHPN++ L Y + +LI + + G L+ L S L
Sbjct: 58 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTE 112
Query: 450 EARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHP----CISGFGLNRLLPG 505
E + + G+ Y+H + H ++K I+L D P I FGL +
Sbjct: 113 EEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID- 168
Query: 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
NE GT ++APE Y + D++S G++ +L+G P
Sbjct: 169 ----FGNEFKNIFGTPE--------FVAPEIVNY-EPLGLEADMWSIGVITYILLSGASP 215
Query: 566 DAG 568
G
Sbjct: 216 FLG 218
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 74/183 (40%), Gaps = 26/183 (14%)
Query: 390 KDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPW 449
+D E EV + +QHPN++ L Y + +LI + + G L+ L S L
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTE 113
Query: 450 EARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHP----CISGFGLNRLLPG 505
E + + G+ Y+H + H ++K I+L D P I FGL +
Sbjct: 114 EEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID- 169
Query: 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
NE GT ++APE Y + D++S G++ +L+G P
Sbjct: 170 ----FGNEFKNIFGTPE--------FVAPEIVNY-EPLGLEADMWSIGVITYILLSGASP 216
Query: 566 DAG 568
G
Sbjct: 217 FLG 219
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 74/183 (40%), Gaps = 26/183 (14%)
Query: 390 KDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPW 449
+D E EV + +QHPN++ L Y + +LI + + G L+ L S L
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTE 113
Query: 450 EARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHP----CISGFGLNRLLPG 505
E + + G+ Y+H + H ++K I+L D P I FGL +
Sbjct: 114 EEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID- 169
Query: 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
NE GT ++APE Y + D++S G++ +L+G P
Sbjct: 170 ----FGNEFKNIFGTPE--------FVAPEIVNY-EPLGLEADMWSIGVITYILLSGASP 216
Query: 566 DAG 568
G
Sbjct: 217 FLG 219
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 108/243 (44%), Gaps = 25/243 (10%)
Query: 333 EGFSLELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDF 392
+ FS ED+ + V+G+ + + + + AV+ + + R + F
Sbjct: 4 DSFSGRFEDVYQLQEDVLGEGAHARVQTCI-----NLITSQEYAVKIIEKQPGHIRSRVF 58
Query: 393 ESEVEAIARVQ-HPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEA 451
EVE + + Q H N++ L F+ D L+ + +R GS+ + +H + EA
Sbjct: 59 R-EVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFN----ELEA 113
Query: 452 RLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLD--DELHPC-ISGFGLN---RLLPG 505
+ + Q A L ++H + H ++K IL + +++ P I FGL +L
Sbjct: 114 SV-VVQDVASALDFLHN---KGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGD 169
Query: 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
S ++ E + G+ ++ + EA IY ++CD++S G++L +L+G P
Sbjct: 170 CSPISTPELLTPCGSAEYMAPEVVEAFSEEASIY----DKRCDLWSLGVILYILLSGYPP 225
Query: 566 DAG 568
G
Sbjct: 226 FVG 228
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 74/183 (40%), Gaps = 26/183 (14%)
Query: 390 KDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPW 449
+D E EV + +QHPN++ L Y + +LI + + G L+ L S L
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTE 113
Query: 450 EARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHP----CISGFGLNRLLPG 505
E + + G+ Y+H + H ++K I+L D P I FGL +
Sbjct: 114 EEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID- 169
Query: 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
NE GT ++APE Y + D++S G++ +L+G P
Sbjct: 170 ----FGNEFKNIFGTPE--------FVAPEIVNY-EPLGLEADMWSIGVITYILLSGASP 216
Query: 566 DAG 568
G
Sbjct: 217 FLG 219
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 74/183 (40%), Gaps = 26/183 (14%)
Query: 390 KDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPW 449
+D E EV + +QHPN++ L Y + +LI + + G L+ L S L
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTE 113
Query: 450 EARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHP----CISGFGLNRLLPG 505
E + + G+ Y+H + H ++K I+L D P I FGL +
Sbjct: 114 EEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID- 169
Query: 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
NE GT ++APE Y + D++S G++ +L+G P
Sbjct: 170 ----FGNEFKNIFGTPE--------FVAPEIVNY-EPLGLEADMWSIGVITYILLSGASP 216
Query: 566 DAG 568
G
Sbjct: 217 FLG 219
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 91/216 (42%), Gaps = 28/216 (12%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+G+ GI+ V R SG +VAV+++ R F +EV + QH N+V
Sbjct: 32 IGEGSTGIVCIATV-RSSG----KLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVE 85
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEY 469
+ Y DE ++ +F+ G+L + + E + + L +H
Sbjct: 86 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE------EQIAAVCLAVLQALSVLHA- 138
Query: 470 SPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISN 529
+ +H +IKS ILL + +S FG + + +V + + +V + IS
Sbjct: 139 --QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQV--SKEVPRRKXLVGTPYWMAPELISR 194
Query: 530 VYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
+ PE D++S GI+++E++ G P
Sbjct: 195 LPYGPE-----------VDIWSLGIMVIEMVDGEPP 219
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 74/183 (40%), Gaps = 26/183 (14%)
Query: 390 KDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPW 449
+D E EV + +QHPN++ L Y + +LI + + G L+ L S L
Sbjct: 58 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTE 112
Query: 450 EARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHP----CISGFGLNRLLPG 505
E + + G+ Y+H + H ++K I+L D P I FGL +
Sbjct: 113 EEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID- 168
Query: 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
NE GT ++APE Y + D++S G++ +L+G P
Sbjct: 169 ----FGNEFKNIFGTPE--------FVAPEIVNY-EPLGLEADMWSIGVITYILLSGASP 215
Query: 566 DAG 568
G
Sbjct: 216 FLG 218
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 91/216 (42%), Gaps = 28/216 (12%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+G+ GI+ V R SG +VAV+++ R F +EV + QH N+V
Sbjct: 28 IGEGSTGIVCIATV-RSSG----KLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVE 81
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEY 469
+ Y DE ++ +F+ G+L + + E + + L +H
Sbjct: 82 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE------EQIAAVCLAVLQALSVLHA- 134
Query: 470 SPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISN 529
+ +H +IKS ILL + +S FG + + +V + + +V + IS
Sbjct: 135 --QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQV--SKEVPRRKXLVGTPYWMAPELISR 190
Query: 530 VYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
+ PE D++S GI+++E++ G P
Sbjct: 191 LPYGPE-----------VDIWSLGIMVIEMVDGEPP 215
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 79/173 (45%), Gaps = 24/173 (13%)
Query: 394 SEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARL 453
+E+ + ++PNIV Y DE ++ +++ GSL + D E ++
Sbjct: 67 NEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMD-------EGQI 119
Query: 454 -KIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKN 512
+ + + L ++H + +H NIKS ILL + ++ FG +++T
Sbjct: 120 AAVCRECLQALEFLHS---NQVIHRNIKSDNILLGMDGSVKLTDFGF------CAQITPE 170
Query: 513 ETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
++ ++ G+ ++APE + + K D++S GI+ +E++ G P
Sbjct: 171 QSKRSTMVGTP------YWMAPEV-VTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 74/183 (40%), Gaps = 26/183 (14%)
Query: 390 KDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPW 449
+D E EV + +QHPN++ L Y + +LI + + G L+ L S L
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTE 113
Query: 450 EARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHP----CISGFGLNRLLPG 505
E + + G+ Y+H + H ++K I+L D P I FGL +
Sbjct: 114 EEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID- 169
Query: 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
NE GT ++APE Y + D++S G++ +L+G P
Sbjct: 170 ----FGNEFKNIFGTPE--------FVAPEIVNY-EPLGLEADMWSIGVITYILLSGASP 216
Query: 566 DAG 568
G
Sbjct: 217 FLG 219
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 97/239 (40%), Gaps = 32/239 (13%)
Query: 356 GIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYY 415
G +VV+ G + AV+ + + + E+E+ + +++H NIV L+ Y
Sbjct: 33 GAFSEVVLAEEKATG--KLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYE 90
Query: 416 ANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYV 475
+ + L+ + G L+ + + +A I Q + Y+H V
Sbjct: 91 SPNHLYLVMQLVSGGELFDRIVEKGFYTEK----DASTLIRQ-VLDAVYYLHRMG---IV 142
Query: 476 HGNIKSTKILL---DDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNV-- 530
H ++K +L D+E IS FGL+++ G G +S
Sbjct: 143 HRDLKPENLLYYSQDEESKIMISDFGLSKM---------------EGKGDVMSTACGTPG 187
Query: 531 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP 589
Y+APE + +++ D +S G++ +L G P END K E +++ + P
Sbjct: 188 YVAPEV-LAQKPYSKAVDCWSIGVIAYILLCG-YPPFYDENDSKLFEQILKAEYEFDSP 244
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 81/181 (44%), Gaps = 31/181 (17%)
Query: 459 TARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTS 518
A+G+ ++ + + +H ++ + ILL I FGL R + KN++
Sbjct: 177 VAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDI-------KNDSNYVV 226
Query: 519 GTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLE 577
+R+ ++APE+ I+ +T + DV+S+GI L E+ + G P G D K
Sbjct: 227 KGNARLPV---KWMAPES-IFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK-FY 281
Query: 578 SLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 637
++++ FR P HA ++ + I C + DP RP + + + ++
Sbjct: 282 KMIKEGFRMLSPE------------HAPAEM---YDIMKTCWDADPLKRPTFKQIVQLIE 326
Query: 638 R 638
+
Sbjct: 327 K 327
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 81/181 (44%), Gaps = 31/181 (17%)
Query: 459 TARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTS 518
A+G+ ++ + + +H ++ + ILL I FGL R + KN++
Sbjct: 170 VAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDI-------KNDSNYVV 219
Query: 519 GTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLE 577
+R+ ++APE+ I+ +T + DV+S+GI L E+ + G P G D K
Sbjct: 220 KGNARLPV---KWMAPES-IFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK-FY 274
Query: 578 SLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 637
++++ FR P HA ++ + I C + DP RP + + + ++
Sbjct: 275 KMIKEGFRMLSPE------------HAPAEM---YDIMKTCWDADPLKRPTFKQIVQLIE 319
Query: 638 R 638
+
Sbjct: 320 K 320
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 74/183 (40%), Gaps = 26/183 (14%)
Query: 390 KDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPW 449
+D E EV + +QHPN++ L Y + +LI + + G L+ L S L
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTE 113
Query: 450 EARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHP----CISGFGLNRLLPG 505
E + + G+ Y+H + H ++K I+L D P I FGL +
Sbjct: 114 EEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID- 169
Query: 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
NE GT ++APE Y + D++S G++ +L+G P
Sbjct: 170 ----FGNEFKNIFGTPE--------FVAPEIVNY-EPLGLEADMWSIGVITYILLSGASP 216
Query: 566 DAG 568
G
Sbjct: 217 FLG 219
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 81/181 (44%), Gaps = 31/181 (17%)
Query: 459 TARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTS 518
A+G+ ++ + + +H ++ + ILL I FGL R + KN++
Sbjct: 172 VAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDI-------KNDSNYVV 221
Query: 519 GTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLE 577
+R+ ++APE+ I+ +T + DV+S+GI L E+ + G P G D K
Sbjct: 222 KGNARLPV---KWMAPES-IFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK-FY 276
Query: 578 SLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 637
++++ FR P HA ++ + I C + DP RP + + + ++
Sbjct: 277 KMIKEGFRMLSPE------------HAPAEM---YDIMKTCWDADPLKRPTFKQIVQLIE 321
Query: 638 R 638
+
Sbjct: 322 K 322
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 58/123 (47%), Gaps = 20/123 (16%)
Query: 447 LPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506
+P E KI T + L ++ E K +H +IK + ILLD + + FG++ L +
Sbjct: 122 IPEEILGKITLATVKALNHLKE--NLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDS 179
Query: 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQ----KCDVYSFGIVLLEILTG 562
T++ G R Y+APE RI S Q + DV+S GI L E+ TG
Sbjct: 180 IAKTRD-------AGCR------PYMAPE-RIDPSASRQGYDVRSDVWSLGITLYELATG 225
Query: 563 RLP 565
R P
Sbjct: 226 RFP 228
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 84/200 (42%), Gaps = 27/200 (13%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLY 433
+VAV+ + G+ ++ + E+ ++HPNIVR K ++ ++ G L+
Sbjct: 46 LVAVKYIERGEKI--DENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELF 103
Query: 434 AAL-HAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHP 492
+ +AG EAR Q + G+ Y H + H ++K LLD P
Sbjct: 104 ERICNAGRFSE-----DEARFFFQQLIS-GVSYCHAM---QVCHRDLKLENTLLDGSPAP 154
Query: 493 --CISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVY 550
I FG ++ S V ++ T GT + Y+APE + + DV+
Sbjct: 155 RLKICAFGYSK-----SSVLHSQPKSTVGTPA--------YIAPEVLLKKEYDGKVADVW 201
Query: 551 SFGIVLLEILTGRLPDAGPE 570
S G+ L +L G P PE
Sbjct: 202 SCGVTLYVMLVGAYPFEDPE 221
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 81/181 (44%), Gaps = 31/181 (17%)
Query: 459 TARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTS 518
A+G+ ++ + + +H ++ + ILL I FGL R + KN++
Sbjct: 154 VAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDI-------KNDSNYVV 203
Query: 519 GTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLE 577
+R+ ++APE+ I+ +T + DV+S+GI L E+ + G P G D K
Sbjct: 204 KGNARLPV---KWMAPES-IFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK-FY 258
Query: 578 SLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 637
++++ FR P HA ++ + I C + DP RP + + + ++
Sbjct: 259 KMIKEGFRMLSPE------------HAPAEM---YDIMKTCWDADPLKRPTFKQIVQLIE 303
Query: 638 R 638
+
Sbjct: 304 K 304
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 98/251 (39%), Gaps = 38/251 (15%)
Query: 390 KDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPW 449
+ F E + + HP+IV+L N +I + G L + L L
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKFS----LDL 110
Query: 450 EARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKV 509
+ + A + L Y+ +++VH +I + +L+ + FGL+R +
Sbjct: 111 ASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSATDCVKLGDFGLSRYM------ 161
Query: 510 TKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAG 568
++ T + G + ++APE+ I +FT DV+ FG+ + EIL G P G
Sbjct: 162 -EDSTYYKASKGK----LPIKWMAPES-INFRRFTSASDVWMFGVCMWEILMHGVKPFQG 215
Query: 569 PENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPR 628
+N+ + + R ER P+ P L + + C DP RPR
Sbjct: 216 VKNN----DVIGRIENGERLPMPPNCPPTL-------------YSLMTKCWAYDPSRRPR 258
Query: 629 MRTVSESLDRV 639
+ L +
Sbjct: 259 FTELKAQLSTI 269
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 18/103 (17%)
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
RGL YIH +H ++K + + ++++ I FGL R T +E +T
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-------TDDE--MTGYV 183
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
+R Y APE + + Q D++S G ++ E+LTGR
Sbjct: 184 ATRW------YRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 96/249 (38%), Gaps = 61/249 (24%)
Query: 341 DLLRASAYVVGKSKNGIMYKVVVGRGS-GMGAPTV-------VAVRRLTEGDATWRFKDF 392
+++R + VG + Y +G G+ GM VA+R+++ + +
Sbjct: 16 EMVRGQVFDVGPRYTNLSY---IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRT 72
Query: 393 ESEVEAIARVQHPNIV------------RLKAFYYAND------EKLLISDFIRNGSLYA 434
E++ + R +H NI+ ++K Y D KLL + + N +
Sbjct: 73 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY 132
Query: 435 ALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCI 494
L+ RGL YIH + +H ++K + +LL+ I
Sbjct: 133 FLYQ--------------------ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKI 169
Query: 495 SGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGI 554
FGL R+ T +T +R Y APE + +T+ D++S G
Sbjct: 170 CDFGLARVADPDHDHT---GFLTEYVATRW------YRAPEIMLNSKGYTKSIDIWSVGC 220
Query: 555 VLLEILTGR 563
+L E+L+ R
Sbjct: 221 ILAEMLSNR 229
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 84/200 (42%), Gaps = 27/200 (13%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLY 433
+VAV+ + G+ ++ + E+ ++HPNIVR K ++ ++ G L+
Sbjct: 46 LVAVKYIERGEKI--DENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELF 103
Query: 434 AAL-HAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHP 492
+ +AG EAR Q + G+ Y H + H ++K LLD P
Sbjct: 104 ERICNAGRFSE-----DEARFFFQQLIS-GVSYCHAM---QVCHRDLKLENTLLDGSPAP 154
Query: 493 --CISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVY 550
I FG ++ S V ++ T GT + Y+APE + + DV+
Sbjct: 155 RLKICAFGYSK-----SSVLHSQPKDTVGTPA--------YIAPEVLLKKEYDGKVADVW 201
Query: 551 SFGIVLLEILTGRLPDAGPE 570
S G+ L +L G P PE
Sbjct: 202 SCGVTLYVMLVGAYPFEDPE 221
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 79/184 (42%), Gaps = 36/184 (19%)
Query: 393 ESEVEAIARVQHPNIVRLKAFYYAND---------------EKLLIS-DFIRNGSLYAAL 436
E EV+A+A++ H NIV + D + L I +F G+L +
Sbjct: 52 EREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWI 111
Query: 437 HAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISG 496
+ L + L++ + +G+ YIH +K ++ ++K + I L D I
Sbjct: 112 EKRRGEKLDKV---LALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGD 165
Query: 497 FGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVL 556
FGL L K +++ + Y++PE +I + ++ D+Y+ G++L
Sbjct: 166 FGLVTSLKNDGKRXRSKGTLR-------------YMSPE-QISSQDYGKEVDLYALGLIL 211
Query: 557 LEIL 560
E+L
Sbjct: 212 AELL 215
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 97/231 (41%), Gaps = 25/231 (10%)
Query: 341 DLLRASAYVVGKSKNGIMYKVVVGRGS-GMGAP-------TVVAVRRLTEGDATWRFKDF 392
++++ + VG + Y +G G+ GM + T VA+++++ + +
Sbjct: 32 EMVKGQPFDVGPRYTQLQY---IGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRT 88
Query: 393 ESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEAR 452
E++ + R +H N++ ++ A+ + + +I + L+ L +
Sbjct: 89 LREIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQ--QLSNDHI 146
Query: 453 LKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKN 512
RGL YIH + +H ++K + +L++ I FGL R+ T
Sbjct: 147 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTG- 202
Query: 513 ETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
+T +R Y APE + +T+ D++S G +L E+L+ R
Sbjct: 203 --FLTEXVATRW------YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 83/200 (41%), Gaps = 27/200 (13%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLY 433
+VAV+ + G+ + + E+ ++HPNIVR K ++ ++ G L+
Sbjct: 46 LVAVKYIERGEKIA--ANVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELF 103
Query: 434 AAL-HAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHP 492
+ +AG EAR Q + G+ Y H + H ++K LLD P
Sbjct: 104 ERICNAGRFSE-----DEARFFFQQLIS-GVSYCHAM---QVCHRDLKLENTLLDGSPAP 154
Query: 493 --CISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVY 550
I FG ++ S V ++ T GT + Y+APE + + DV+
Sbjct: 155 RLKICDFGYSK-----SSVLHSQPKSTVGTPA--------YIAPEVLLKKEYDGKVADVW 201
Query: 551 SFGIVLLEILTGRLPDAGPE 570
S G+ L +L G P PE
Sbjct: 202 SCGVTLYVMLVGAYPFEDPE 221
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 97/249 (38%), Gaps = 38/249 (15%)
Query: 392 FESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEA 451
F E + + HP+IV+L N +I + G L + L L +
Sbjct: 438 FLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKFS----LDLAS 492
Query: 452 RLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTK 511
+ A + L Y+ +++VH +I + +L+ + FGL+R + +
Sbjct: 493 LILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-------E 542
Query: 512 NETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPE 570
+ T + G + ++APE+ I +FT DV+ FG+ + EIL G P G +
Sbjct: 543 DSTYYKASKGK----LPIKWMAPES-INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK 597
Query: 571 NDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMR 630
N+ + + R ER P+ P L + + C DP RPR
Sbjct: 598 NN----DVIGRIENGERLPMPPNCPPTL-------------YSLMTKCWAYDPSRRPRFT 640
Query: 631 TVSESLDRV 639
+ L +
Sbjct: 641 ELKAQLSTI 649
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 18/103 (17%)
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
RGL YIH +H ++K + + ++++ I FGL R T +E +T
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-------TDDE--MTGXV 183
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
+R Y APE + + Q D++S G ++ E+LTGR
Sbjct: 184 ATRW------YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 111/275 (40%), Gaps = 42/275 (15%)
Query: 336 SLELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESE 395
+LE +L + A+ GK N Y + S G VAV+ L E + + SE
Sbjct: 46 NLEFGKVLGSGAF--GKVMNATAYGI-----SKTGVSIQVAVKMLKEKADSSEREALMSE 98
Query: 396 VEAIARV-QHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAG--------------- 439
++ + ++ H NIV L + LI ++ G L L +
Sbjct: 99 LKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQK 158
Query: 440 ---PSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISG 496
+ L L +E L A A+G+ ++ + VH ++ + +L+ I
Sbjct: 159 RLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDLAARNVLVTHGKVVKICD 215
Query: 497 FGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVL 556
FGL R + + V G + + ++APE+ ++ +T K DV+S+GI+L
Sbjct: 216 FGLAR------DIMSDSNYVVRGN----ARLPVKWMAPES-LFEGIYTIKSDVWSYGILL 264
Query: 557 LEILT-GRLPDAGPENDGKGLESLVRKAFRERRPL 590
EI + G P G D L++ F+ +P
Sbjct: 265 WEIFSLGVNPYPGIPVDA-NFYKLIQNGFKMDQPF 298
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 18/103 (17%)
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
RGL YIH +H ++K + + ++++ I FGL R T +E +T
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARH-------TDDE--MTGYV 183
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
+R Y APE + + Q D++S G ++ E+LTGR
Sbjct: 184 ATRW------YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 96/235 (40%), Gaps = 24/235 (10%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLY 433
+VA++ + + ++E+EA+ ++H +I +L ++ ++ ++ G L+
Sbjct: 37 MVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELF 96
Query: 434 AALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPC 493
+ S L E + + + Y+H + Y H ++K +L D+
Sbjct: 97 DYI-----ISQDRLSEEETRVVFRQIVSAVAYVHS---QGYAHRDLKPENLLFDEYHKLK 148
Query: 494 ISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFG 553
+ FGL K K+ + T S Y APE S + DV+S G
Sbjct: 149 LIDFGL----CAKPKGNKDYHLQTCCG-------SLAYAAPELIQGKSYLGSEADVWSMG 197
Query: 554 IVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQV 608
I+L ++ G LP D + +L +K R + + + + P+ + + QV
Sbjct: 198 ILLYVLMCGFLP-----FDDDNVMALYKKIMRGKYDVPKWLSPSSILLLQQMLQV 247
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 74/173 (42%), Gaps = 22/173 (12%)
Query: 394 SEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEAR- 452
+E + + +V +V L Y D L+ + G L ++ P EAR
Sbjct: 233 NEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFP----EARA 288
Query: 453 LKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKN 512
+ A GL +H + V+ ++K ILLDD H IS GL +P +
Sbjct: 289 VFYAAEICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVP------EG 339
Query: 513 ETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
+TI R+ + Y+APE + ++T D ++ G +L E++ G+ P
Sbjct: 340 QTI-----KGRVGTVG--YMAPEV-VKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 66/162 (40%), Gaps = 24/162 (14%)
Query: 405 PNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKI-AQGTARGL 463
P IV + ++ D+ I D + G L+ L S EA ++ A GL
Sbjct: 252 PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFS------EADMRFYAAEIILGL 305
Query: 464 MYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSR 523
++H R V+ ++K ILLD+ H IS GL +K + + GT
Sbjct: 306 EHMHN---RFVVYRDLKPANILLDEHGHVRISDLGL------ACDFSKKKPHASVGTHG- 355
Query: 524 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
Y+APE G + D +S G +L ++L G P
Sbjct: 356 -------YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 76/172 (44%), Gaps = 21/172 (12%)
Query: 394 SEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARL 453
+E+ + +P++V F+ +D ++ + R SL LH P EAR
Sbjct: 91 TEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEP---EARY 146
Query: 454 KIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNE 513
+ Q T +G+ Y+H + +H ++K + L+D++ I FGL TK E
Sbjct: 147 FMRQ-TIQGVQYLHN---NRVIHRDLKLGNLFLNDDMDVKIGDFGL---------ATKIE 193
Query: 514 TIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
G + + Y+APE + + + D++S G +L +L G+ P
Sbjct: 194 ---FDGERKKTLCGTPNYIAPEV-LCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 66/162 (40%), Gaps = 24/162 (14%)
Query: 405 PNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKI-AQGTARGL 463
P IV + ++ D+ I D + G L+ L S EA ++ A GL
Sbjct: 251 PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFS------EADMRFYAAEIILGL 304
Query: 464 MYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSR 523
++H R V+ ++K ILLD+ H IS GL +K + + GT
Sbjct: 305 EHMHN---RFVVYRDLKPANILLDEHGHVRISDLGL------ACDFSKKKPHASVGTHG- 354
Query: 524 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
Y+APE G + D +S G +L ++L G P
Sbjct: 355 -------YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 389
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 14/117 (11%)
Query: 453 LKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKN 512
+++ + G+ Y+ E +VH ++ + +LL + + IS FGL++ L K
Sbjct: 472 IELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 528
Query: 513 ETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAG 568
+T + APE Y KF+ K DV+SFG+++ E + G+ P G
Sbjct: 529 QTH---------GKWPVKWYAPECINY-YKFSSKSDVWSFGVLMWEAFSYGQKPYRG 575
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 18/103 (17%)
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
RGL YIH +H ++K + + ++++ I FGL R T +E +T
Sbjct: 141 RGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARH-------TDDE--MTGYV 188
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
+R Y APE + + Q D++S G ++ E+LTGR
Sbjct: 189 ATRW------YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 18/103 (17%)
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
RGL YIH +H ++K + + ++++ I FGL R T +E +T
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-------TDDE--MTGYV 183
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
+R Y APE + + Q D++S G ++ E+LTGR
Sbjct: 184 ATRW------YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 74/173 (42%), Gaps = 22/173 (12%)
Query: 394 SEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEAR- 452
+E + + +V +V L Y D L+ + G L ++ P EAR
Sbjct: 233 NEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFP----EARA 288
Query: 453 LKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKN 512
+ A GL +H + V+ ++K ILLDD H IS GL +P +
Sbjct: 289 VFYAAEICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVP------EG 339
Query: 513 ETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
+TI R+ + Y+APE + ++T D ++ G +L E++ G+ P
Sbjct: 340 QTI-----KGRVGTVG--YMAPEV-VKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 14/117 (11%)
Query: 453 LKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKN 512
+++ + G+ Y+ E +VH ++ + +LL + + IS FGL++ L K
Sbjct: 473 IELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 529
Query: 513 ETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAG 568
+T + APE Y KF+ K DV+SFG+++ E + G+ P G
Sbjct: 530 QTH---------GKWPVKWYAPECINY-YKFSSKSDVWSFGVLMWEAFSYGQKPYRG 576
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 63/134 (47%), Gaps = 16/134 (11%)
Query: 453 LKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKN 512
+++ + G+ Y+ E +VH ++ + +LL + + IS FGL++ L K
Sbjct: 130 IELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 186
Query: 513 ETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPEN 571
+T + APE Y KF+ K DV+SFG+++ E + G+ P G +
Sbjct: 187 QTHGKWPVK---------WYAPECINY-YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK- 235
Query: 572 DGKGLESLVRKAFR 585
G + +++ K R
Sbjct: 236 -GSEVTAMLEKGER 248
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 63/134 (47%), Gaps = 16/134 (11%)
Query: 453 LKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKN 512
+++ + G+ Y+ E +VH ++ + +LL + + IS FGL++ L K
Sbjct: 130 IELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 186
Query: 513 ETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPEN 571
+T + APE Y KF+ K DV+SFG+++ E + G+ P G +
Sbjct: 187 QTHGKWPVK---------WYAPECINY-YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK- 235
Query: 572 DGKGLESLVRKAFR 585
G + +++ K R
Sbjct: 236 -GSEVTAMLEKGER 248
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 18/103 (17%)
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
RGL YIH +H ++K + + ++++ I FGL R T +E +T
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-------TDDE--MTGYV 183
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
+R Y APE + + Q D++S G ++ E+LTGR
Sbjct: 184 ATRW------YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 18/103 (17%)
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
RGL YIH +H ++K + + ++++ I FGL R T +E +T
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-------TDDE--MTGYV 183
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
+R Y APE + + Q D++S G ++ E+LTGR
Sbjct: 184 ATRW------YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 18/103 (17%)
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
RGL YIH +H ++K + + ++++ I FGL R T +E +T
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-------TDDE--MTGYV 183
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
+R Y APE + + Q D++S G ++ E+LTGR
Sbjct: 184 ATRW------YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 18/103 (17%)
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
RGL YIH +H ++K + + ++++ I FGL R T +E +T
Sbjct: 138 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-------TDDE--MTGYV 185
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
+R Y APE + + Q D++S G ++ E+LTGR
Sbjct: 186 ATRW------YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 18/103 (17%)
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
RGL YIH +H ++K + + ++++ I FGL R T +E +T
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-------TDDE--MTGYV 183
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
+R Y APE + + Q D++S G ++ E+LTGR
Sbjct: 184 ATRW------YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 75/170 (44%), Gaps = 17/170 (10%)
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLK 454
E+ + ++H NIVRL + ++ L+ +F+ N L + + + P +K
Sbjct: 53 EISLMKELKHENIVRLYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVK 111
Query: 455 IAQGTA-RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNE 513
Q +GL + HE K +H ++K +L++ + FGL R G T +
Sbjct: 112 YFQWQLLQGLAFCHE---NKILHRDLKPQNLLINKRGQLKLGDFGLARAF-GIPVNTFSS 167
Query: 514 TIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
+VT Y AP+ + ++ D++S G +L E++TG+
Sbjct: 168 EVVTLW-----------YRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 18/103 (17%)
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
RGL YIH +H ++K + + ++++ I FGL R T +E +T
Sbjct: 143 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-------TADE--MTGYV 190
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
+R Y APE + + Q D++S G ++ E+LTGR
Sbjct: 191 ATRW------YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 18/103 (17%)
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
RGL YIH +H ++K + + ++++ I FGL R T +E +T
Sbjct: 141 RGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARH-------TDDE--MTGYV 188
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
+R Y APE + + Q D++S G ++ E+LTGR
Sbjct: 189 ATRW------YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 18/103 (17%)
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
RGL YIH +H ++K + + ++++ I FGL R T +E +T
Sbjct: 142 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-------TDDE--MTGYV 189
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
+R Y APE + + Q D++S G ++ E+LTGR
Sbjct: 190 ATRW------YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 18/103 (17%)
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
RGL YIH +H ++K + + ++++ I FGL R T +E +T
Sbjct: 147 RGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARH-------TDDE--MTGYV 194
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
+R Y APE + + Q D++S G ++ E+LTGR
Sbjct: 195 ATRW------YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 18/103 (17%)
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
RGL YIH +H ++K + + ++++ I FGL R T +E +T
Sbjct: 143 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-------TADE--MTGYV 190
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
+R Y APE + + Q D++S G ++ E+LTGR
Sbjct: 191 ATRW------YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 18/103 (17%)
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
RGL YIH +H ++K + + ++++ I FGL R T +E +T
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-------TDDE--MTGYV 183
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
+R Y APE + + Q D++S G ++ E+LTGR
Sbjct: 184 ATRW------YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 18/103 (17%)
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
RGL YIH +H ++K + + ++++ I FGL R T +E +T
Sbjct: 138 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-------TDDE--MTGYV 185
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
+R Y APE + + Q D++S G ++ E+LTGR
Sbjct: 186 ATRW------YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 18/103 (17%)
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
RGL YIH +H ++K + + ++++ I FGL R T +E +T
Sbjct: 138 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-------TDDE--MTGYV 185
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
+R Y APE + + Q D++S G ++ E+LTGR
Sbjct: 186 ATRW------YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 18/103 (17%)
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
RGL YIH +H ++K + + ++++ I FGL R T +E +T
Sbjct: 143 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-------TDDE--MTGYV 190
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
+R Y APE + + Q D++S G ++ E+LTGR
Sbjct: 191 ATRW------YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 18/103 (17%)
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
RGL YIH +H ++K + + ++++ I FGL R T +E +T
Sbjct: 148 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-------TDDE--MTGYV 195
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
+R Y APE + + Q D++S G ++ E+LTGR
Sbjct: 196 ATRW------YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 18/103 (17%)
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
RGL YIH +H ++K + + ++++ I FGL R T +E +T
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-------TDDE--MTGYV 183
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
+R Y APE + + Q D++S G ++ E+LTGR
Sbjct: 184 ATRW------YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 18/103 (17%)
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
RGL YIH +H ++K + + ++++ I FGL R T +E +T
Sbjct: 148 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-------TDDE--MTGYV 195
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
+R Y APE + + Q D++S G ++ E+LTGR
Sbjct: 196 ATRW------YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 63/134 (47%), Gaps = 16/134 (11%)
Query: 453 LKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKN 512
+++ + G+ Y+ E +VH ++ + +LL + + IS FGL++ L K
Sbjct: 128 IELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 184
Query: 513 ETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPEN 571
+T + APE Y KF+ K DV+SFG+++ E + G+ P G +
Sbjct: 185 QTHGKWPVK---------WYAPECINY-YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK- 233
Query: 572 DGKGLESLVRKAFR 585
G + +++ K R
Sbjct: 234 -GSEVTAMLEKGER 246
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 18/103 (17%)
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
RGL YIH +H ++K + + ++++ I FGL R T +E +T
Sbjct: 148 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-------TDDE--MTGYV 195
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
+R Y APE + + Q D++S G ++ E+LTGR
Sbjct: 196 ATRW------YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 18/103 (17%)
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
RGL YIH +H ++K + + ++++ I FGL R T +E +T
Sbjct: 142 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-------TDDE--MTGYV 189
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
+R Y APE + + Q D++S G ++ E+LTGR
Sbjct: 190 ATRW------YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 18/103 (17%)
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
RGL YIH +H ++K + + ++++ I FGL R T +E +T
Sbjct: 143 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-------TADE--MTGYV 190
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
+R Y APE + + Q D++S G ++ E+LTGR
Sbjct: 191 ATRW------YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 18/103 (17%)
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
RGL YIH +H ++K + + ++++ I FGL R T +E +T
Sbjct: 146 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-------TDDE--MTGYV 193
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
+R Y APE + + Q D++S G ++ E+LTGR
Sbjct: 194 ATRW------YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 18/103 (17%)
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
RGL YIH +H ++K + + ++++ I FGL R T +E +T
Sbjct: 141 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-------TDDE--MTGYV 188
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
+R Y APE + + Q D++S G ++ E+LTGR
Sbjct: 189 ATRW------YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 79/179 (44%), Gaps = 31/179 (17%)
Query: 459 TARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTS 518
A+G+ ++ + RK +H ++ + ILL ++ I FGL R + K+ V
Sbjct: 207 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR------DIYKDPDYVRK 257
Query: 519 GTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLE 577
G + + ++APE I+ +T + DV+SFG++L EI + G P G + D +
Sbjct: 258 GD----ARLPLKWMAPET-IFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 312
Query: 578 SLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESL 636
L ++ R R P + P + + L+C +P RP + E L
Sbjct: 313 RL-KEGTRMRAP--DYTTPEM-------------YQTMLDCWHGEPSQRPTFSELVEHL 355
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 18/103 (17%)
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
RGL YIH +H ++K + + ++++ I FGL R T +E +T
Sbjct: 141 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-------TDDE--MTGYV 188
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
+R Y APE + + Q D++S G ++ E+LTGR
Sbjct: 189 ATRW------YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 88/215 (40%), Gaps = 26/215 (12%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFE-SEVEAIARVQHPNI 407
+VG+ G++ K R G +VA+++ E D K E++ + +++H N+
Sbjct: 32 LVGEGSYGMVMKC---RNKDTG--RIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENL 86
Query: 408 VRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIH 467
V L L+ +F+ + ++ L P+ L ++ K G+ + H
Sbjct: 87 VNLLEVCKKKKRWYLVFEFV-DHTILDDLELFPN----GLDYQVVQKYLFQIINGIGFCH 141
Query: 468 EYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAI 527
++ +H +IK IL+ + FG R L +V +E
Sbjct: 142 SHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVA------------ 186
Query: 528 SNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTG 562
+ Y APE + K+ + DV++ G ++ E+ G
Sbjct: 187 TRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMG 221
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 18/103 (17%)
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
RGL YIH +H ++K + + ++++ I FGL R T +E +T
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-------TDDE--MTGYV 183
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
+R Y APE + + Q D++S G ++ E+LTGR
Sbjct: 184 ATRW------YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 18/103 (17%)
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
RGL YIH +H ++K + + ++++ I FGL R T +E +T
Sbjct: 135 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-------TDDE--MTGYV 182
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
+R Y APE + + Q D++S G ++ E+LTGR
Sbjct: 183 ATRW------YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 77/172 (44%), Gaps = 21/172 (12%)
Query: 394 SEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARL 453
+E+ + +P++V F+ +D ++ + R SL LH P EAR
Sbjct: 75 TEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEP---EARY 130
Query: 454 KIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNE 513
+ Q T +G+ Y+H + +H ++K + L+D++ I FGL + + K+
Sbjct: 131 FMRQ-TIQGVQYLHN---NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKD- 185
Query: 514 TIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
GT + Y+APE + + + D++S G +L +L G+ P
Sbjct: 186 ---LCGTPN--------YIAPEV-LCKKGHSFEVDIWSLGCILYTLLVGKPP 225
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 18/103 (17%)
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
RGL YIH +H ++K + + ++++ I FGL R T +E +T
Sbjct: 142 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-------TDDE--MTGYV 189
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
+R Y APE + + Q D++S G ++ E+LTGR
Sbjct: 190 ATRW------YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 79/179 (44%), Gaps = 31/179 (17%)
Query: 459 TARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTS 518
A+G+ ++ + RK +H ++ + ILL ++ I FGL R + K+ V
Sbjct: 209 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR------DIYKDPDYVRK 259
Query: 519 GTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLE 577
G + + ++APE I+ +T + DV+SFG++L EI + G P G + D +
Sbjct: 260 GD----ARLPLKWMAPET-IFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 314
Query: 578 SLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESL 636
L ++ R R P + P + + L+C +P RP + E L
Sbjct: 315 RL-KEGTRMRAP--DYTTPEM-------------YQTMLDCWHGEPSQRPTFSELVEHL 357
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 18/103 (17%)
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
RGL YIH +H ++K + + ++++ I FGL R T +E +T
Sbjct: 132 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-------TDDE--MTGYV 179
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
+R Y APE + + Q D++S G ++ E+LTGR
Sbjct: 180 ATRW------YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 18/103 (17%)
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
RGL YIH +H ++K + + ++++ I FGL R T +E +T
Sbjct: 133 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-------TDDE--MTGYV 180
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
+R Y APE + + Q D++S G ++ E+LTGR
Sbjct: 181 ATRW------YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 18/103 (17%)
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
RGL YIH +H ++K + + ++++ I FGL R T +E +T
Sbjct: 156 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-------TDDE--MTGYV 203
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
+R Y APE + + Q D++S G ++ E+LTGR
Sbjct: 204 ATRW------YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 79/179 (44%), Gaps = 31/179 (17%)
Query: 459 TARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTS 518
A+G+ ++ + RK +H ++ + ILL ++ I FGL R + K+ V
Sbjct: 202 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR------DIYKDPDYVRK 252
Query: 519 GTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLE 577
G + + ++APE I+ +T + DV+SFG++L EI + G P G + D +
Sbjct: 253 GD----ARLPLKWMAPET-IFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 307
Query: 578 SLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESL 636
L ++ R R P + P + + L+C +P RP + E L
Sbjct: 308 RL-KEGTRMRAP--DYTTPEM-------------YQTMLDCWHGEPSQRPTFSELVEHL 350
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 18/103 (17%)
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
RGL YIH +H ++K + + ++++ I FGL R T +E +T
Sbjct: 147 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-------TDDE--MTGYV 194
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
+R Y APE + + Q D++S G ++ E+LTGR
Sbjct: 195 ATRW------YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 18/103 (17%)
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
RGL YIH +H ++K + + ++++ I FGL R T +E +T
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-------TDDE--MTGYV 183
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
+R Y APE + + Q D++S G ++ E+LTGR
Sbjct: 184 ATRW------YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 18/103 (17%)
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
RGL YIH +H ++K + + ++++ I FGL R T +E +T
Sbjct: 159 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-------TDDE--MTGYV 206
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
+R Y APE + + Q D++S G ++ E+LTGR
Sbjct: 207 ATRW------YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 18/103 (17%)
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
RGL YIH +H ++K + + ++++ I FGL R T +E +T
Sbjct: 156 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-------TDDE--MTGYV 203
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
+R Y APE + + Q D++S G ++ E+LTGR
Sbjct: 204 ATRW------YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 18/103 (17%)
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
RGL YIH +H ++K + + ++++ I FGL R T +E +T
Sbjct: 132 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-------TDDE--MTGYV 179
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
+R Y APE + + Q D++S G ++ E+LTGR
Sbjct: 180 ATRW------YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 18/103 (17%)
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
RGL YIH +H ++K + + ++++ I FGL R T +E +T
Sbjct: 155 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-------TDDE--MTGYV 202
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
+R Y APE + + Q D++S G ++ E+LTGR
Sbjct: 203 ATRW------YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 18/103 (17%)
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
RGL YIH +H ++K + + ++++ I FGL R T +E +T
Sbjct: 155 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-------TDDE--MTGYV 202
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
+R Y APE + + Q D++S G ++ E+LTGR
Sbjct: 203 ATRW------YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 76/172 (44%), Gaps = 21/172 (12%)
Query: 394 SEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARL 453
+E+ + +P++V F+ +D ++ + R SL LH P EAR
Sbjct: 91 TEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEP---EARY 146
Query: 454 KIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNE 513
+ Q T +G+ Y+H + +H ++K + L+D++ I FGL TK E
Sbjct: 147 FMRQ-TIQGVQYLHN---NRVIHRDLKLGNLFLNDDMDVKIGDFGL---------ATKIE 193
Query: 514 TIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
G + + Y+APE + + + D++S G +L +L G+ P
Sbjct: 194 ---FDGERKKXLCGTPNYIAPEV-LCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 18/103 (17%)
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
RGL YIH +H ++K + + ++++ I FGL R T +E +T
Sbjct: 133 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-------TDDE--MTGYV 180
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
+R Y APE + + Q D++S G ++ E+LTGR
Sbjct: 181 ATRW------YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 18/103 (17%)
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
RGL YIH +H ++K + + ++++ I FGL R T +E +T
Sbjct: 132 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-------TDDE--MTGYV 179
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
+R Y APE + + Q D++S G ++ E+LTGR
Sbjct: 180 ATRW------YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 66/162 (40%), Gaps = 24/162 (14%)
Query: 405 PNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKI-AQGTARGL 463
P IV + ++ D+ I D + G L+ L S EA ++ A GL
Sbjct: 252 PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFS------EADMRFYAAEIILGL 305
Query: 464 MYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSR 523
++H R V+ ++K ILLD+ H IS GL +K + + GT
Sbjct: 306 EHMHN---RFVVYRDLKPANILLDEHGHVRISDLGL------ACDFSKKKPHASVGTHG- 355
Query: 524 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
Y+APE G + D +S G +L ++L G P
Sbjct: 356 -------YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 66/162 (40%), Gaps = 24/162 (14%)
Query: 405 PNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKI-AQGTARGL 463
P IV + ++ D+ I D + G L+ L S EA ++ A GL
Sbjct: 252 PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFS------EADMRFYAAEIILGL 305
Query: 464 MYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSR 523
++H R V+ ++K ILLD+ H IS GL +K + + GT
Sbjct: 306 EHMHN---RFVVYRDLKPANILLDEHGHVRISDLGL------ACDFSKKKPHASVGTHG- 355
Query: 524 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
Y+APE G + D +S G +L ++L G P
Sbjct: 356 -------YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 97/249 (38%), Gaps = 38/249 (15%)
Query: 392 FESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEA 451
F E + + HP+IV+L N +I + G L + L L +
Sbjct: 438 FLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKFS----LDLAS 492
Query: 452 RLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTK 511
+ A + L Y+ +++VH +I + +L+ + FGL+R + +
Sbjct: 493 LILYAYQLSTALAYLES---KRFVHRDIAARNVLVSATDCVKLGDFGLSRYM-------E 542
Query: 512 NETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPE 570
+ T + G + ++APE+ I +FT DV+ FG+ + EIL G P G +
Sbjct: 543 DSTYYKASKGK----LPIKWMAPES-INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK 597
Query: 571 NDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMR 630
N+ + + R ER P+ P L + + C DP RPR
Sbjct: 598 NN----DVIGRIENGERLPMPPNCPPTL-------------YSLMTKCWAYDPSRRPRFT 640
Query: 631 TVSESLDRV 639
+ L +
Sbjct: 641 ELKAQLSTI 649
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 79/173 (45%), Gaps = 24/173 (13%)
Query: 394 SEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARL 453
+E+ + ++PNIV Y DE ++ +++ GSL + D E ++
Sbjct: 66 NEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMD-------EGQI 118
Query: 454 -KIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKN 512
+ + + L ++H + +H +IKS ILL + ++ FG +++T
Sbjct: 119 AAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGF------CAQITPE 169
Query: 513 ETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
++ ++ G+ ++APE + + K D++S GI+ +E++ G P
Sbjct: 170 QSKRSTMVGTP------YWMAPEV-VTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 84/200 (42%), Gaps = 27/200 (13%)
Query: 374 VVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLY 433
+VAV+ + G+ ++ + E+ ++HPNIVR K ++ ++ G L+
Sbjct: 45 LVAVKYIERGEKID--ENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELF 102
Query: 434 AAL-HAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHP 492
+ +AG EAR Q + G+ Y H + H ++K LLD P
Sbjct: 103 ERICNAGRFSE-----DEARFFFQQLIS-GVSYCHAM---QVCHRDLKLENTLLDGSPAP 153
Query: 493 --CISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVY 550
I FG ++ S V ++ T GT + Y+APE + + DV+
Sbjct: 154 RLKICDFGYSK-----SSVLHSQPKSTVGTPA--------YIAPEVLLKKEYDGKVADVW 200
Query: 551 SFGIVLLEILTGRLPDAGPE 570
S G+ L +L G P PE
Sbjct: 201 SCGVTLYVMLVGAYPFEDPE 220
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 18/103 (17%)
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
RGL YIH +H ++K + + ++++ I FGL R T +E +T
Sbjct: 134 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-------TDDE--MTGYV 181
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
+R Y APE + + Q D++S G ++ E+LTGR
Sbjct: 182 ATRW------YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 63/134 (47%), Gaps = 16/134 (11%)
Query: 453 LKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKN 512
+++ + G+ Y+ E +VH ++ + +LL + + IS FGL++ L K
Sbjct: 114 IELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 170
Query: 513 ETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPEN 571
+T + APE Y KF+ K DV+SFG+++ E + G+ P G +
Sbjct: 171 QTHGKWPVK---------WYAPECINY-YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK- 219
Query: 572 DGKGLESLVRKAFR 585
G + +++ K R
Sbjct: 220 -GSEVTAMLEKGER 232
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 63/134 (47%), Gaps = 16/134 (11%)
Query: 453 LKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKN 512
+++ + G+ Y+ E +VH ++ + +LL + + IS FGL++ L K
Sbjct: 120 IELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 176
Query: 513 ETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPEN 571
+T + APE Y KF+ K DV+SFG+++ E + G+ P G +
Sbjct: 177 QTHGKWPVK---------WYAPECINY-YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK- 225
Query: 572 DGKGLESLVRKAFR 585
G + +++ K R
Sbjct: 226 -GSEVTAMLEKGER 238
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 79/179 (44%), Gaps = 31/179 (17%)
Query: 459 TARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTS 518
A+G+ ++ + RK +H ++ + ILL ++ I FGL R + K+ V
Sbjct: 200 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR------DIYKDPDYVRK 250
Query: 519 GTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLE 577
G + + ++APE I+ +T + DV+SFG++L EI + G P G + D +
Sbjct: 251 GD----ARLPLKWMAPET-IFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 305
Query: 578 SLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESL 636
L ++ R R P + P + + L+C +P RP + E L
Sbjct: 306 RL-KEGTRMRAP--DYTTPEM-------------YQTMLDCWHGEPSQRPTFSELVEHL 348
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 63/134 (47%), Gaps = 16/134 (11%)
Query: 453 LKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKN 512
+++ + G+ Y+ E +VH ++ + +LL + + IS FGL++ L K
Sbjct: 114 IELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKA 170
Query: 513 ETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPEN 571
+T + APE Y KF+ K DV+SFG+++ E + G+ P G +
Sbjct: 171 QTHGKWPVK---------WYAPECINY-YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK- 219
Query: 572 DGKGLESLVRKAFR 585
G + +++ K R
Sbjct: 220 -GSEVTAMLEKGER 232
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 63/134 (47%), Gaps = 16/134 (11%)
Query: 453 LKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKN 512
+++ + G+ Y+ E +VH ++ + +LL + + IS FGL++ L K
Sbjct: 110 IELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 166
Query: 513 ETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPEN 571
+T + APE Y KF+ K DV+SFG+++ E + G+ P G +
Sbjct: 167 QTHGKWPVK---------WYAPECINY-YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK- 215
Query: 572 DGKGLESLVRKAFR 585
G + +++ K R
Sbjct: 216 -GSEVTAMLEKGER 228
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 93/235 (39%), Gaps = 33/235 (14%)
Query: 341 DLLRASAYVVGKSKNGIMYKVVVGRGS-GMGAPTV-------VAVRRLTEGDATWRFKDF 392
+++R + VG + Y +G G+ GM VA+++++ + +
Sbjct: 16 EMVRGQVFDVGPRYTNLSY---IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT 72
Query: 393 ESEVEAIARVQHPNIVRLKAFYYA----NDEKLLISDFIRNGSLYAALHAGPSDSLPPLP 448
E++ + R +H NI+ + A + + I + LY L L
Sbjct: 73 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQH------LS 126
Query: 449 WEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSK 508
+ RGL YIH + +H ++K + +LL+ I FGL R+
Sbjct: 127 NDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD 183
Query: 509 VTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
T +T +R Y APE + +T+ D++S G +L E+L+ R
Sbjct: 184 HT---GFLTEYVATRW------YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 79/174 (45%), Gaps = 26/174 (14%)
Query: 394 SEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARL 453
+E+ + ++PNIV Y DE ++ +++ GSL + D E ++
Sbjct: 66 NEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMD-------EGQI 118
Query: 454 -KIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGL-NRLLPGTSKVTK 511
+ + + L ++H + +H +IKS ILL + ++ FG ++ P SK +
Sbjct: 119 AAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK--R 173
Query: 512 NETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
+E + T ++APE + + K D++S GI+ +E++ G P
Sbjct: 174 SEMVGTP-----------YWMAPEV-VTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 475 VHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAP 534
+H ++K + +L++ + FGL R++ ++ T SG ++ + Y AP
Sbjct: 134 IHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVA--TRWYRAP 191
Query: 535 EARIYGSKFTQKCDVYSFGIVLLEILTGR 563
E + +K+++ DV+S G +L E+ R
Sbjct: 192 EVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 63/134 (47%), Gaps = 16/134 (11%)
Query: 453 LKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKN 512
+++ + G+ Y+ E +VH ++ + +LL + + IS FGL++ L K
Sbjct: 108 IELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 164
Query: 513 ETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPEN 571
+T + APE Y KF+ K DV+SFG+++ E + G+ P G +
Sbjct: 165 QTHGKWPVK---------WYAPECINY-YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK- 213
Query: 572 DGKGLESLVRKAFR 585
G + +++ K R
Sbjct: 214 -GSEVTAMLEKGER 226
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 77/172 (44%), Gaps = 21/172 (12%)
Query: 394 SEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARL 453
+E+ + +P++V F+ +D ++ + R SL LH P EAR
Sbjct: 91 TEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEP---EARY 146
Query: 454 KIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNE 513
+ Q T +G+ Y+H + +H ++K + L+D++ I FGL + + K+
Sbjct: 147 FMRQ-TIQGVQYLHN---NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKD- 201
Query: 514 TIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
GT + Y+APE + + + D++S G +L +L G+ P
Sbjct: 202 ---LCGTPN--------YIAPEV-LCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 96/249 (38%), Gaps = 61/249 (24%)
Query: 341 DLLRASAYVVGKSKNGIMYKVVVGRGS-GMGAPTV-------VAVRRLTEGDATWRFKDF 392
+++R + VG + Y +G G+ GM VA+++++ + +
Sbjct: 10 EMVRGQVFDVGPRYTNLSY---IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT 66
Query: 393 ESEVEAIARVQHPNIV------------RLKAFYYAND------EKLLISDFIRNGSLYA 434
E++ + R +H NI+ ++K Y D KLL + + N +
Sbjct: 67 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY 126
Query: 435 ALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCI 494
L+ RGL YIH + +H ++K + +LL+ I
Sbjct: 127 FLYQ--------------------ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKI 163
Query: 495 SGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGI 554
FGL R+ T +T +R Y APE + +T+ D++S G
Sbjct: 164 CDFGLARVADPDHDHT---GFLTEYVATRW------YRAPEIMLNSKGYTKSIDIWSVGC 214
Query: 555 VLLEILTGR 563
+L E+L+ R
Sbjct: 215 ILAEMLSNR 223
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 96/249 (38%), Gaps = 61/249 (24%)
Query: 341 DLLRASAYVVGKSKNGIMYKVVVGRGS-GMGAPTV-------VAVRRLTEGDATWRFKDF 392
+++R + VG + Y +G G+ GM VA+++++ + +
Sbjct: 17 EMVRGQVFDVGPRYTNLSY---IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT 73
Query: 393 ESEVEAIARVQHPNIV------------RLKAFYYAND------EKLLISDFIRNGSLYA 434
E++ + R +H NI+ ++K Y D KLL + + N +
Sbjct: 74 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY 133
Query: 435 ALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCI 494
L+ RGL YIH + +H ++K + +LL+ I
Sbjct: 134 FLYQ--------------------ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKI 170
Query: 495 SGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGI 554
FGL R+ T +T +R Y APE + +T+ D++S G
Sbjct: 171 CDFGLARVADPDHDHT---GFLTEYVATRW------YRAPEIMLNSKGYTKSIDIWSVGC 221
Query: 555 VLLEILTGR 563
+L E+L+ R
Sbjct: 222 ILAEMLSNR 230
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 18/103 (17%)
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
RGL YIH +H ++K + + ++++ I FGL R T +E +T
Sbjct: 138 RGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLARH-------TDDE--MTGYV 185
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
+R Y APE + + Q D++S G ++ E+LTGR
Sbjct: 186 ATRW------YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 96/249 (38%), Gaps = 61/249 (24%)
Query: 341 DLLRASAYVVGKSKNGIMYKVVVGRGS-GMGAPTV-------VAVRRLTEGDATWRFKDF 392
+++R + VG + Y +G G+ GM VA+++++ + +
Sbjct: 18 EMVRGQVFDVGPRYTNLSY---IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT 74
Query: 393 ESEVEAIARVQHPNIV------------RLKAFYYAND------EKLLISDFIRNGSLYA 434
E++ + R +H NI+ ++K Y D KLL + + N +
Sbjct: 75 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY 134
Query: 435 ALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCI 494
L+ RGL YIH + +H ++K + +LL+ I
Sbjct: 135 FLYQ--------------------ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKI 171
Query: 495 SGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGI 554
FGL R+ T +T +R Y APE + +T+ D++S G
Sbjct: 172 CDFGLARVADPDHDHT---GFLTEYVATRW------YRAPEIMLNSKGYTKSIDIWSVGC 222
Query: 555 VLLEILTGR 563
+L E+L+ R
Sbjct: 223 ILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 96/249 (38%), Gaps = 61/249 (24%)
Query: 341 DLLRASAYVVGKSKNGIMYKVVVGRGS-GMGAPTV-------VAVRRLTEGDATWRFKDF 392
+++R + VG + Y +G G+ GM VA+++++ + +
Sbjct: 9 EMVRGQVFDVGPRYTNLSY---IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT 65
Query: 393 ESEVEAIARVQHPNIV------------RLKAFYYAND------EKLLISDFIRNGSLYA 434
E++ + R +H NI+ ++K Y D KLL + + N +
Sbjct: 66 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY 125
Query: 435 ALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCI 494
L+ RGL YIH + +H ++K + +LL+ I
Sbjct: 126 FLYQ--------------------ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKI 162
Query: 495 SGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGI 554
FGL R+ T +T +R Y APE + +T+ D++S G
Sbjct: 163 CDFGLARVADPDHDHT---GFLTEYVATRW------YRAPEIMLNSKGYTKSIDIWSVGC 213
Query: 555 VLLEILTGR 563
+L E+L+ R
Sbjct: 214 ILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 96/249 (38%), Gaps = 61/249 (24%)
Query: 341 DLLRASAYVVGKSKNGIMYKVVVGRGS-GMGAPTV-------VAVRRLTEGDATWRFKDF 392
+++R + VG + Y +G G+ GM VA+++++ + +
Sbjct: 16 EMVRGQVFDVGPRYTNLSY---IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT 72
Query: 393 ESEVEAIARVQHPNIV------------RLKAFYYAND------EKLLISDFIRNGSLYA 434
E++ + R +H NI+ ++K Y D KLL + + N +
Sbjct: 73 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY 132
Query: 435 ALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCI 494
L+ RGL YIH + +H ++K + +LL+ I
Sbjct: 133 FLYQ--------------------ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKI 169
Query: 495 SGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGI 554
FGL R+ T +T +R Y APE + +T+ D++S G
Sbjct: 170 CDFGLARVADPDHDHT---GFLTEYVATRW------YRAPEIMLNSKGYTKSIDIWSVGC 220
Query: 555 VLLEILTGR 563
+L E+L+ R
Sbjct: 221 ILAEMLSNR 229
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 96/249 (38%), Gaps = 61/249 (24%)
Query: 341 DLLRASAYVVGKSKNGIMYKVVVGRGS-GMGAPTV-------VAVRRLTEGDATWRFKDF 392
+++R + VG + Y +G G+ GM VA+++++ + +
Sbjct: 10 EMVRGQVFDVGPRYTNLSY---IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT 66
Query: 393 ESEVEAIARVQHPNIV------------RLKAFYYAND------EKLLISDFIRNGSLYA 434
E++ + R +H NI+ ++K Y D KLL + + N +
Sbjct: 67 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY 126
Query: 435 ALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCI 494
L+ RGL YIH + +H ++K + +LL+ I
Sbjct: 127 FLYQ--------------------ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKI 163
Query: 495 SGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGI 554
FGL R+ T +T +R Y APE + +T+ D++S G
Sbjct: 164 CDFGLARVADPDHDHT---GFLTEYVATRW------YRAPEIMLNSKGYTKSIDIWSVGC 214
Query: 555 VLLEILTGR 563
+L E+L+ R
Sbjct: 215 ILAEMLSNR 223
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 475 VHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAP 534
+H ++K + +L++ + FGL R++ ++ T SG ++ + Y AP
Sbjct: 134 IHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVA--TRWYRAP 191
Query: 535 EARIYGSKFTQKCDVYSFGIVLLEILTGR 563
E + +K+++ DV+S G +L E+ R
Sbjct: 192 EVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 99/245 (40%), Gaps = 38/245 (15%)
Query: 366 GSGMGAPTVVAVRRLT---------EGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYA 416
GSG + + +RLT + +R E+E+ + +++H NIV L+ Y +
Sbjct: 18 GSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYES 77
Query: 417 NDEKLLISDFIRNGSLY-AALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYV 475
L+ + G L+ L G +A L I Q + Y+HE V
Sbjct: 78 TTHYYLVMQLVSGGELFDRILERGVYTEK-----DASLVIQQ-VLSAVKYLHE---NGIV 128
Query: 476 HGNIKSTKILL---DDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYL 532
H ++K +L ++ I+ FGL+++ + I+++ G + Y+
Sbjct: 129 HRDLKPENLLYLTPEENSKIMITDFGLSKM--------EQNGIMSTACG------TPGYV 174
Query: 533 APEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSE 592
APE + +++ D +S G++ +L G P E + K E + + P +
Sbjct: 175 APEV-LAQKPYSKAVDCWSIGVITYILLCG-YPPFYEETESKLFEKIKEGYYEFESPFWD 232
Query: 593 VIDPA 597
I +
Sbjct: 233 DISES 237
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 96/249 (38%), Gaps = 61/249 (24%)
Query: 341 DLLRASAYVVGKSKNGIMYKVVVGRGS-GMGAPTV-------VAVRRLTEGDATWRFKDF 392
+++R + VG + Y +G G+ GM VA+++++ + +
Sbjct: 12 EMVRGQVFDVGPRYTNLSY---IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT 68
Query: 393 ESEVEAIARVQHPNIV------------RLKAFYYAND------EKLLISDFIRNGSLYA 434
E++ + R +H NI+ ++K Y D KLL + + N +
Sbjct: 69 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY 128
Query: 435 ALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCI 494
L+ RGL YIH + +H ++K + +LL+ I
Sbjct: 129 FLYQ--------------------ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKI 165
Query: 495 SGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGI 554
FGL R+ T +T +R Y APE + +T+ D++S G
Sbjct: 166 CDFGLARVADPDHDHT---GFLTEYVATRW------YRAPEIMLNSKGYTKSIDIWSVGC 216
Query: 555 VLLEILTGR 563
+L E+L+ R
Sbjct: 217 ILAEMLSNR 225
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 18/103 (17%)
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
RGL YIH +H ++K + + ++++ I FGL R T +E +T
Sbjct: 142 RGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLARH-------TDDE--MTGYV 189
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
+R Y APE + + Q D++S G ++ E+LTGR
Sbjct: 190 ATRW------YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 96/249 (38%), Gaps = 61/249 (24%)
Query: 341 DLLRASAYVVGKSKNGIMYKVVVGRGS-GMGAPTV-------VAVRRLTEGDATWRFKDF 392
+++R + VG + Y +G G+ GM VA+++++ + +
Sbjct: 16 EMVRGQVFDVGPRYTNLSY---IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRT 72
Query: 393 ESEVEAIARVQHPNIV------------RLKAFYYAND------EKLLISDFIRNGSLYA 434
E++ + R +H NI+ ++K Y D KLL + + N +
Sbjct: 73 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY 132
Query: 435 ALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCI 494
L+ RGL YIH + +H ++K + +LL+ I
Sbjct: 133 FLYQ--------------------ILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKI 169
Query: 495 SGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGI 554
FGL R+ T +T +R Y APE + +T+ D++S G
Sbjct: 170 CDFGLARVADPDHDHT---GFLTEYVATRW------YRAPEIMLNSKGYTKSIDIWSVGC 220
Query: 555 VLLEILTGR 563
+L E+L+ R
Sbjct: 221 ILAEMLSNR 229
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 96/249 (38%), Gaps = 61/249 (24%)
Query: 341 DLLRASAYVVGKSKNGIMYKVVVGRGS-GMGAPTV-------VAVRRLTEGDATWRFKDF 392
+++R + VG + Y +G G+ GM VA+++++ + +
Sbjct: 14 EMVRGQVFDVGPRYTNLSY---IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT 70
Query: 393 ESEVEAIARVQHPNIV------------RLKAFYYAND------EKLLISDFIRNGSLYA 434
E++ + R +H NI+ ++K Y D KLL + + N +
Sbjct: 71 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY 130
Query: 435 ALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCI 494
L+ RGL YIH + +H ++K + +LL+ I
Sbjct: 131 FLYQ--------------------ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKI 167
Query: 495 SGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGI 554
FGL R+ T +T +R Y APE + +T+ D++S G
Sbjct: 168 CDFGLARVADPDHDHT---GFLTEYVATRW------YRAPEIMLNSKGYTKSIDIWSVGC 218
Query: 555 VLLEILTGR 563
+L E+L+ R
Sbjct: 219 ILAEMLSNR 227
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 96/249 (38%), Gaps = 61/249 (24%)
Query: 341 DLLRASAYVVGKSKNGIMYKVVVGRGS-GMGAPTV-------VAVRRLTEGDATWRFKDF 392
+++R + VG + Y +G G+ GM VA+++++ + +
Sbjct: 16 EMVRGQVFDVGPRYTNLSY---IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT 72
Query: 393 ESEVEAIARVQHPNIV------------RLKAFYYAND------EKLLISDFIRNGSLYA 434
E++ + R +H NI+ ++K Y D KLL + + N +
Sbjct: 73 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY 132
Query: 435 ALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCI 494
L+ RGL YIH + +H ++K + +LL+ I
Sbjct: 133 FLYQ--------------------ILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKI 169
Query: 495 SGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGI 554
FGL R+ T +T +R Y APE + +T+ D++S G
Sbjct: 170 CDFGLARVADPDHDHT---GFLTEYVATRW------YRAPEIMLNSKGYTKSIDIWSVGC 220
Query: 555 VLLEILTGR 563
+L E+L+ R
Sbjct: 221 ILAEMLSNR 229
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 96/249 (38%), Gaps = 61/249 (24%)
Query: 341 DLLRASAYVVGKSKNGIMYKVVVGRGS-GMGAPTV-------VAVRRLTEGDATWRFKDF 392
+++R + VG + Y +G G+ GM VA+++++ + +
Sbjct: 12 EMVRGQVFDVGPRYTNLSY---IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT 68
Query: 393 ESEVEAIARVQHPNIV------------RLKAFYYAND------EKLLISDFIRNGSLYA 434
E++ + R +H NI+ ++K Y D KLL + + N +
Sbjct: 69 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY 128
Query: 435 ALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCI 494
L+ RGL YIH + +H ++K + +LL+ I
Sbjct: 129 FLYQ--------------------ILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKI 165
Query: 495 SGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGI 554
FGL R+ T +T +R Y APE + +T+ D++S G
Sbjct: 166 CDFGLARVADPDHDHT---GFLTEYVATRW------YRAPEIMLNSKGYTKSIDIWSVGC 216
Query: 555 VLLEILTGR 563
+L E+L+ R
Sbjct: 217 ILAEMLSNR 225
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 96/249 (38%), Gaps = 61/249 (24%)
Query: 341 DLLRASAYVVGKSKNGIMYKVVVGRGS-GMGAPTV-------VAVRRLTEGDATWRFKDF 392
+++R + VG + Y +G G+ GM VA+++++ + +
Sbjct: 20 EMVRGQVFDVGPRYTNLSY---IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT 76
Query: 393 ESEVEAIARVQHPNIV------------RLKAFYYAND------EKLLISDFIRNGSLYA 434
E++ + R +H NI+ ++K Y D KLL + + N +
Sbjct: 77 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY 136
Query: 435 ALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCI 494
L+ RGL YIH + +H ++K + +LL+ I
Sbjct: 137 FLYQ--------------------ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKI 173
Query: 495 SGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGI 554
FGL R+ T +T +R Y APE + +T+ D++S G
Sbjct: 174 CDFGLARVADPDHDHT---GFLTEYVATRW------YRAPEIMLNSKGYTKSIDIWSVGC 224
Query: 555 VLLEILTGR 563
+L E+L+ R
Sbjct: 225 ILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 96/249 (38%), Gaps = 61/249 (24%)
Query: 341 DLLRASAYVVGKSKNGIMYKVVVGRGS-GMGAPTV-------VAVRRLTEGDATWRFKDF 392
+++R + VG + Y +G G+ GM VA+++++ + +
Sbjct: 12 EMVRGQVFDVGPRYTNLSY---IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT 68
Query: 393 ESEVEAIARVQHPNIV------------RLKAFYYAND------EKLLISDFIRNGSLYA 434
E++ + R +H NI+ ++K Y D KLL + + N +
Sbjct: 69 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY 128
Query: 435 ALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCI 494
L+ RGL YIH + +H ++K + +LL+ I
Sbjct: 129 FLYQ--------------------ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKI 165
Query: 495 SGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGI 554
FGL R+ T +T +R Y APE + +T+ D++S G
Sbjct: 166 CDFGLARVADPDHDHT---GFLTEYVATRW------YRAPEIMLNSKGYTKSIDIWSVGC 216
Query: 555 VLLEILTGR 563
+L E+L+ R
Sbjct: 217 ILAEMLSNR 225
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 91/226 (40%), Gaps = 41/226 (18%)
Query: 355 NGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFY 414
NG +V GR G + V +T GD ++ + E+ + + H + A Y
Sbjct: 34 NGTYGQVYKGRHVKTGQLAAIKVMDVT-GDEE---EEIKQEINMLKKYSHHRNI---ATY 86
Query: 415 YA----------NDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLM 464
Y +D+ L+ +F GS+ + ++L W A I + RGL
Sbjct: 87 YGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKE-EWIAY--ICREILRGLS 143
Query: 465 YIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRI 524
++H++ K +H +IK +LL + + FG++ L T G R
Sbjct: 144 HLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT-------------VGRRN 187
Query: 525 SAISNVY-LAPEARIY----GSKFTQKCDVYSFGIVLLEILTGRLP 565
+ I Y +APE + + K D++S GI +E+ G P
Sbjct: 188 TFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPP 233
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 96/249 (38%), Gaps = 61/249 (24%)
Query: 341 DLLRASAYVVGKSKNGIMYKVVVGRGS-GMGAPTV-------VAVRRLTEGDATWRFKDF 392
+++R + VG + Y +G G+ GM VA+++++ + +
Sbjct: 32 EMVRGQVFDVGPRYTNLSY---IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT 88
Query: 393 ESEVEAIARVQHPNIV------------RLKAFYYAND------EKLLISDFIRNGSLYA 434
E++ + R +H NI+ ++K Y D KLL + + N +
Sbjct: 89 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY 148
Query: 435 ALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCI 494
L+ RGL YIH + +H ++K + +LL+ I
Sbjct: 149 FLYQ--------------------ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKI 185
Query: 495 SGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGI 554
FGL R+ T +T +R Y APE + +T+ D++S G
Sbjct: 186 CDFGLARVADPDHDHT---GFLTEYVATRW------YRAPEIMLNSKGYTKSIDIWSVGC 236
Query: 555 VLLEILTGR 563
+L E+L+ R
Sbjct: 237 ILAEMLSNR 245
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 88/185 (47%), Gaps = 32/185 (17%)
Query: 395 EVEAIARVQHPNIVR-LKAFYYAND-EKLLISDFIRNGSLYAALHAGPSDSLPPLPW--- 449
EV+A+A+++HP IVR A+ N EKL S LY + ++L W
Sbjct: 53 EVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSS--PKVYLYIQMQLCRKENLKD--WMNG 108
Query: 450 ----EAR-----LKIAQGTARGLMYIHEYSPRKYVHGNIKSTKIL--LDDELHPCISGFG 498
E R L I A + ++H + +H ++K + I +DD + + FG
Sbjct: 109 RCTIEERERSVCLHIFLQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVK--VGDFG 163
Query: 499 LNRLLPGTSKVTKNETIVTS--GTGSRISAI-SNVYLAPEARIYGSKFTQKCDVYSFGIV 555
L + + + +T++T + + +Y++PE +I+G+ ++ K D++S G++
Sbjct: 164 L---VTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPE-QIHGNSYSHKVDIFSLGLI 219
Query: 556 LLEIL 560
L E+L
Sbjct: 220 LFELL 224
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 85/214 (39%), Gaps = 38/214 (17%)
Query: 363 VGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEK-- 420
V RG G V + E + +R E+E+ ++H NI+ F A+++
Sbjct: 58 VWRGKWRGEEVAVKIFSSREERSWFR----EAEIYQTVMLRHENIL---GFIAADNKDNG 110
Query: 421 -----LLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIH-----EYS 470
L+SD+ +GSL+ L+ + E +K+A TA GL ++H
Sbjct: 111 TWTQLWLVSDYHEHGSLFDYLNR------YTVTVEGMIKLALSTASGLAHLHMEIVGTQG 164
Query: 471 PRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNV 530
H ++KS IL+ CI+ GL V + T +
Sbjct: 165 KPAIAHRDLKSKNILVKKNGTCCIADLGL--------AVRHDSATDTIDIAPNHRVGTKR 216
Query: 531 YLAPEA---RIYGSKFT--QKCDVYSFGIVLLEI 559
Y+APE I F ++ D+Y+ G+V EI
Sbjct: 217 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 78/173 (45%), Gaps = 24/173 (13%)
Query: 394 SEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARL 453
+E+ + ++PNIV Y DE ++ +++ GSL + D E ++
Sbjct: 66 NEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMD-------EGQI 118
Query: 454 -KIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKN 512
+ + + L ++H + +H +IKS ILL + ++ FG +++T
Sbjct: 119 AAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGF------CAQITPE 169
Query: 513 ETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
++ + G+ ++APE + + K D++S GI+ +E++ G P
Sbjct: 170 QSKRSXMVGTP------YWMAPEV-VTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 112/273 (41%), Gaps = 36/273 (13%)
Query: 368 GMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFI 427
G T V ++ L + + FE+ ++++ H ++V + DE +L+ +F+
Sbjct: 36 GQLHETEVLLKVLDKAHRNYSESFFEA-ASMMSKLSHKHLVLNYGVCFCGDENILVQEFV 94
Query: 428 RNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLD 487
+ GSL L + + + W +L++A+ A + ++ E + +HGN+ + ILL
Sbjct: 95 KFGSLDTYLKK--NKNCINILW--KLEVAKQLAWAMHFLEENT---LIHGNVCAKNILLI 147
Query: 488 DELHPCISGFGLNRLL-PGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQK 546
E +L PG S + I+ RI ++ PE
Sbjct: 148 REEDRKTGNPPFIKLSDPGISITVLPKDILQE----RIP-----WVPPECIENPKNLNLA 198
Query: 547 CDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKR 606
D +SFG L EI +G + L+S + F E R ++ P K
Sbjct: 199 TDKWSFGTTLWEICSG------GDKPLSALDSQRKLQFYEDR--HQLPAP--------KA 242
Query: 607 QVLATFHIALNCTELDPEFRPRMRTVSESLDRV 639
LA ++ NC + +P+ RP R + L+ +
Sbjct: 243 AELA--NLINNCMDYEPDHRPSFRAIIRDLNSL 273
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 18/103 (17%)
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
RGL YIH +H ++K + + ++++ I FGL R T +E +T
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLCRH-------TDDE--MTGYV 183
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
+R Y APE + + Q D++S G ++ E+LTGR
Sbjct: 184 ATRW------YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 85/211 (40%), Gaps = 29/211 (13%)
Query: 365 RGSGMG---APTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKL 421
R G G A + RRL+ ++ E EV + ++HPNI+ L + + +
Sbjct: 25 RQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84
Query: 422 LISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKS 481
LI + + G L+ L S L + + + G+ Y+H ++ H ++K
Sbjct: 85 LILELVSGGELFDFLAEKES-----LTEDEATQFLKQILDGVHYLH---SKRIAHFDLKP 136
Query: 482 TKILLDDELHPC----ISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEAR 537
I+L D+ P + FG+ + NE GT ++APE
Sbjct: 137 ENIMLLDKNVPNPRIKLIDFGIAHKIEAG-----NEFKNIFGTPE--------FVAPEIV 183
Query: 538 IYGSKFTQKCDVYSFGIVLLEILTGRLPDAG 568
Y + D++S G++ +L+G P G
Sbjct: 184 NY-EPLGLEADMWSIGVITYILLSGASPFLG 213
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 96/249 (38%), Gaps = 61/249 (24%)
Query: 341 DLLRASAYVVGKSKNGIMYKVVVGRGS-GMGAPTV-------VAVRRLTEGDATWRFKDF 392
+++R + VG + Y +G G+ GM VA+++++ + +
Sbjct: 12 EMVRGQVFDVGPRYTNLSY---IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT 68
Query: 393 ESEVEAIARVQHPNIV------------RLKAFYYAND------EKLLISDFIRNGSLYA 434
E++ + R +H NI+ ++K Y D KLL + + N +
Sbjct: 69 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY 128
Query: 435 ALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCI 494
L+ RGL YIH + +H ++K + +LL+ I
Sbjct: 129 FLYQ--------------------ILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKI 165
Query: 495 SGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGI 554
FGL R+ T +T +R Y APE + +T+ D++S G
Sbjct: 166 CDFGLARVADPDHDHT---GFLTEYVATRW------YRAPEIMLNSKGYTKSIDIWSVGC 216
Query: 555 VLLEILTGR 563
+L E+L+ R
Sbjct: 217 ILAEMLSNR 225
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 18/103 (17%)
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
RGL YIH +H ++K + + ++++ I FGL R T +E T
Sbjct: 156 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-------TDDEMXGXVAT 205
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
Y APE + + Q D++S G ++ E+LTGR
Sbjct: 206 --------RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 95/242 (39%), Gaps = 47/242 (19%)
Query: 341 DLLRASAYVVGKSKNGIMYKVVVGRGS-GMGAPTV-------VAVRRLTEGDATWRFKDF 392
+++R + VG + Y +G G+ GM VA+++++ + +
Sbjct: 32 EMVRGQVFDVGPRYTNLSY---IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT 88
Query: 393 ESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL------YAALHAGPSDSLPP 446
E++ + R +H NI+ I+D IR ++ Y H +D
Sbjct: 89 LREIKILLRFRHENIIG-------------INDIIRAPTIEQMKDVYLVTHLMGADLYKL 135
Query: 447 LPWEAR-----LKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNR 501
L + RGL YIH + +H ++K + +LL+ I FGL R
Sbjct: 136 LKTQHLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLAR 192
Query: 502 LLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT 561
+ T +T +R Y APE + +T+ D++S G +L E+L+
Sbjct: 193 VADPDHDHT---GFLTEYVATRW------YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 243
Query: 562 GR 563
R
Sbjct: 244 NR 245
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 87/216 (40%), Gaps = 36/216 (16%)
Query: 368 GMGAPTVVAVRRLTEGDATWRFK--------------DFESEVEAIARVQHPNIVRLKAF 413
G GA VAV +L D + K F E + + I L
Sbjct: 83 GRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYA 142
Query: 414 YYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRK 473
+ ++ L+ D+ G L L + D LP AR +A+ ++ I
Sbjct: 143 FQDDNNLYLVMDYYVGGDLLTLL-SKFEDRLPEEM--ARFYLAEM----VIAIDSVHQLH 195
Query: 474 YVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLA 533
YVH +IK IL+D H ++ FG K+ ++ T+ +S ++ + Y++
Sbjct: 196 YVHRDIKPDNILMDMNGHIRLADFG------SCLKLMEDGTVQSS-----VAVGTPDYIS 244
Query: 534 PE--ARIYGSK--FTQKCDVYSFGIVLLEILTGRLP 565
PE + G K + +CD +S G+ + E+L G P
Sbjct: 245 PEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETP 280
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 85/211 (40%), Gaps = 29/211 (13%)
Query: 365 RGSGMG---APTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKL 421
R G G A + RRL+ ++ E EV + ++HPNI+ L + + +
Sbjct: 32 RQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 91
Query: 422 LISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKS 481
LI + + G L+ L S L + + + G+ Y+H ++ H ++K
Sbjct: 92 LILELVSGGELFDFLAEKES-----LTEDEATQFLKQILDGVHYLH---SKRIAHFDLKP 143
Query: 482 TKILLDDELHPC----ISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEAR 537
I+L D+ P + FG+ + NE GT ++APE
Sbjct: 144 ENIMLLDKNVPNPRIKLIDFGIAHKIEAG-----NEFKNIFGTPE--------FVAPEIV 190
Query: 538 IYGSKFTQKCDVYSFGIVLLEILTGRLPDAG 568
Y + D++S G++ +L+G P G
Sbjct: 191 NY-EPLGLEADMWSIGVITYILLSGASPFLG 220
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 96/225 (42%), Gaps = 45/225 (20%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+G+ I+Y+ + G P + V + T R +E+ + R+ HPNI++
Sbjct: 61 LGRGATSIVYRC---KQKGTQKPYALKVLKKTVDKKIVR-----TEIGVLLRLSHPNIIK 112
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAAL----HAGPSDSLPPLPWEARLKIAQGTARGLMY 465
LK + E L+ + + G L+ + + D+ +A +I + A Y
Sbjct: 113 LKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAA-----DAVKQILEAVA----Y 163
Query: 466 IHEYSPRKYVHGNIKSTKILL-----DDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
+HE VH ++K +L D L I+ FGL SK+ +++ ++ +
Sbjct: 164 LHE---NGIVHRDLKPENLLYATPAPDAPLK--IADFGL-------SKIVEHQVLMKTVC 211
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
G + Y APE + G + + D++S GI+ +L G P
Sbjct: 212 G------TPGYCAPEI-LRGCAYGPEVDMWSVGIITYILLCGFEP 249
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 78/173 (45%), Gaps = 24/173 (13%)
Query: 394 SEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARL 453
+E+ + ++PNIV Y DE ++ +++ GSL + D E ++
Sbjct: 67 NEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMD-------EGQI 119
Query: 454 -KIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKN 512
+ + + L ++H + +H +IKS ILL + ++ FG +++T
Sbjct: 120 AAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGF------CAQITPE 170
Query: 513 ETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
++ + G+ ++APE + + K D++S GI+ +E++ G P
Sbjct: 171 QSKRSXMVGTP------YWMAPEV-VTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 85/214 (39%), Gaps = 38/214 (17%)
Query: 363 VGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEK-- 420
V RG G V + E + +R E+E+ ++H NI+ F A+++
Sbjct: 19 VWRGKWRGEEVAVKIFSSREERSWFR----EAEIYQTVMLRHENIL---GFIAADNKDNG 71
Query: 421 -----LLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIH-----EYS 470
L+SD+ +GSL+ L+ + E +K+A TA GL ++H
Sbjct: 72 TWTQLWLVSDYHEHGSLFDYLNR------YTVTVEGMIKLALSTASGLAHLHMEIVGTQG 125
Query: 471 PRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNV 530
H ++KS IL+ CI+ GL V + T +
Sbjct: 126 KPAIAHRDLKSKNILVKKNGTCCIADLGL--------AVRHDSATDTIDIAPNHRVGTKR 177
Query: 531 YLAPEA---RIYGSKFT--QKCDVYSFGIVLLEI 559
Y+APE I F ++ D+Y+ G+V EI
Sbjct: 178 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 12/103 (11%)
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
RGL YIH +H ++K + +LL+ I FGL R+ T +T
Sbjct: 137 RGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT---GFLTEYV 190
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
+R Y APE + +T+ D++S G +L E+L+ R
Sbjct: 191 ATRW------YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 85/214 (39%), Gaps = 38/214 (17%)
Query: 363 VGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEK-- 420
V RG G V + E + +R E+E+ ++H NI+ F A+++
Sbjct: 45 VWRGKWRGEEVAVKIFSSREERSWFR----EAEIYQTVMLRHENIL---GFIAADNKDNG 97
Query: 421 -----LLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIH-----EYS 470
L+SD+ +GSL+ L+ + E +K+A TA GL ++H
Sbjct: 98 TWTQLWLVSDYHEHGSLFDYLNR------YTVTVEGMIKLALSTASGLAHLHMEIVGTQG 151
Query: 471 PRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNV 530
H ++KS IL+ CI+ GL V + T +
Sbjct: 152 KPAIAHRDLKSKNILVKKNGTCCIADLGL--------AVRHDSATDTIDIAPNHRVGTKR 203
Query: 531 YLAPEA---RIYGSKFT--QKCDVYSFGIVLLEI 559
Y+APE I F ++ D+Y+ G+V EI
Sbjct: 204 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 12/103 (11%)
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
RGL YIH + +H ++K + +LL+ I FGL R+ T +T
Sbjct: 135 RGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHT---GFLTEYV 188
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
+R Y APE + +T+ D++S G +L E+L+ R
Sbjct: 189 ATRW------YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 107/243 (44%), Gaps = 25/243 (10%)
Query: 333 EGFSLELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDF 392
+ FS ED+ + V+G+ + + + + AV+ + + R + F
Sbjct: 4 DSFSGRFEDVYQLQEDVLGEGAHARVQTCI-----NLITSQEYAVKIIEKQPGHIRSRVF 58
Query: 393 ESEVEAIARVQ-HPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEA 451
EVE + + Q H N++ L F+ D L+ + +R GS+ + +H + EA
Sbjct: 59 R-EVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFN----ELEA 113
Query: 452 RLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLD--DELHPC-ISGFGLN---RLLPG 505
+ + Q A L ++H + H ++K IL + +++ P I F L +L
Sbjct: 114 SV-VVQDVASALDFLHN---KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGD 169
Query: 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
S ++ E + G+ ++ + EA IY ++CD++S G++L +L+G P
Sbjct: 170 CSPISTPELLTPCGSAEYMAPEVVEAFSEEASIY----DKRCDLWSLGVILYILLSGYPP 225
Query: 566 DAG 568
G
Sbjct: 226 FVG 228
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 85/214 (39%), Gaps = 38/214 (17%)
Query: 363 VGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEK-- 420
V RG G V + E + +R E+E+ ++H NI+ F A+++
Sbjct: 22 VWRGKWRGEEVAVKIFSSREERSWFR----EAEIYQTVMLRHENIL---GFIAADNKDNG 74
Query: 421 -----LLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIH-----EYS 470
L+SD+ +GSL+ L+ + E +K+A TA GL ++H
Sbjct: 75 TWTQLWLVSDYHEHGSLFDYLNR------YTVTVEGMIKLALSTASGLAHLHMEIVGTQG 128
Query: 471 PRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNV 530
H ++KS IL+ CI+ GL V + T +
Sbjct: 129 KPAIAHRDLKSKNILVKKNGTCCIADLGL--------AVRHDSATDTIDIAPNHRVGTKR 180
Query: 531 YLAPEA---RIYGSKFT--QKCDVYSFGIVLLEI 559
Y+APE I F ++ D+Y+ G+V EI
Sbjct: 181 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 85/214 (39%), Gaps = 38/214 (17%)
Query: 363 VGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEK-- 420
V RG G V + E + +R E+E+ ++H NI+ F A+++
Sbjct: 20 VWRGKWRGEEVAVKIFSSREERSWFR----EAEIYQTVMLRHENIL---GFIAADNKDNG 72
Query: 421 -----LLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIH-----EYS 470
L+SD+ +GSL+ L+ + E +K+A TA GL ++H
Sbjct: 73 TWTQLWLVSDYHEHGSLFDYLNR------YTVTVEGMIKLALSTASGLAHLHMEIVGTQG 126
Query: 471 PRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNV 530
H ++KS IL+ CI+ GL V + T +
Sbjct: 127 KPAIAHRDLKSKNILVKKNGTCCIADLGL--------AVRHDSATDTIDIAPNHRVGTKR 178
Query: 531 YLAPEA---RIYGSKFT--QKCDVYSFGIVLLEI 559
Y+APE I F ++ D+Y+ G+V EI
Sbjct: 179 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 18/103 (17%)
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
RGL YIH +H ++K + + ++++ I +GL R T +E +T
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDYGLARH-------TDDE--MTGYV 183
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
+R Y APE + + Q D++S G ++ E+LTGR
Sbjct: 184 ATRW------YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 85/214 (39%), Gaps = 38/214 (17%)
Query: 363 VGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEK-- 420
V RG G V + E + +R E+E+ ++H NI+ F A+++
Sbjct: 25 VWRGKWRGEEVAVKIFSSREERSWFR----EAEIYQTVMLRHENIL---GFIAADNKDNG 77
Query: 421 -----LLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIH-----EYS 470
L+SD+ +GSL+ L+ + E +K+A TA GL ++H
Sbjct: 78 TWTQLWLVSDYHEHGSLFDYLNR------YTVTVEGMIKLALSTASGLAHLHMEIVGTQG 131
Query: 471 PRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNV 530
H ++KS IL+ CI+ GL V + T +
Sbjct: 132 KPAIAHRDLKSKNILVKKNGTCCIADLGL--------AVRHDSATDTIDIAPNHRVGTKR 183
Query: 531 YLAPEA---RIYGSKFT--QKCDVYSFGIVLLEI 559
Y+APE I F ++ D+Y+ G+V EI
Sbjct: 184 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 18/103 (17%)
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
RGL YIH +H ++K + + ++++ I FGL R T +E T
Sbjct: 159 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-------TDDEMXGYVAT 208
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
Y APE + + Q D++S G ++ E+LTGR
Sbjct: 209 --------RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 66/151 (43%), Gaps = 27/151 (17%)
Query: 446 PLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLN-RLLP 504
P+P K+ + L Y+ E +H ++K + ILLD+ + FG++ RL+
Sbjct: 120 PIPERILGKMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVD 177
Query: 505 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARI-----YGSKFTQKCDVYSFGIVLLEI 559
+K SA Y+APE RI + + DV+S GI L+E+
Sbjct: 178 DKAKDR--------------SAGCAAYMAPE-RIDPPDPTKPDYDIRADVWSLGISLVEL 222
Query: 560 LTGRLPDAGPENDGKGLESLVRKAFRERRPL 590
TG+ P + D + ++ K +E PL
Sbjct: 223 ATGQFPYKNCKTDFE----VLTKVLQEEPPL 249
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 475 VHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAP 534
+H ++K + +L++ + FGL R++ ++ T SG ++ + Y AP
Sbjct: 134 IHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVA--TRWYRAP 191
Query: 535 EARIYGSKFTQKCDVYSFGIVLLEILTGR 563
E + +K+++ DV+S G +L E+ R
Sbjct: 192 EVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 18/103 (17%)
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
RGL YIH +H ++K + + ++++ I FGL R T +E T
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-------TDDEMAGFVAT 185
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
Y APE + + Q D++S G ++ E+LTGR
Sbjct: 186 --------RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 18/103 (17%)
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
RGL YIH +H ++K + + ++++ I FGL R T +E T
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-------TDDEMAGFVAT 185
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
Y APE + + Q D++S G ++ E+LTGR
Sbjct: 186 --------RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 18/103 (17%)
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
RGL YIH +H ++K + + ++++ I FGL R T +E T
Sbjct: 132 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-------TDDEMAGFVAT 181
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
Y APE + + Q D++S G ++ E+LTGR
Sbjct: 182 --------RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/214 (19%), Positives = 91/214 (42%), Gaps = 30/214 (14%)
Query: 362 VVGRGSGMGAPTVVAVR-------RLTEGDATWR---FKDFESEVEAIARVQHPNIVRLK 411
++G+GS G ++ ++ + A ++ + ++EV+ +++HP+I+ L
Sbjct: 18 LLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELY 77
Query: 412 AFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSP 471
++ ++ L+ + NG + L + + P G++Y+H +
Sbjct: 78 NYFEDSNYVYLVLEMCHNGEMNRYL----KNRVKPFSENEARHFMHQIITGMLYLHSHG- 132
Query: 472 RKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVY 531
+H ++ + +LL ++ I+ FGL L K+ + GT + Y
Sbjct: 133 --ILHRDLTLSNLLLTRNMNIKIADFGLATQL----KMPHEKHYTLCGTPN--------Y 178
Query: 532 LAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
++PE S + DV+S G + +L GR P
Sbjct: 179 ISPEIAT-RSAHGLESDVWSLGCMFYTLLIGRPP 211
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 12/103 (11%)
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
RGL YIH +H ++K + +LL+ I FGL R+ T +T
Sbjct: 137 RGLKYIHS---ANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHT---GFLTEYV 190
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
+R Y APE + +T+ D++S G +L E+L+ R
Sbjct: 191 ATRW------YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 84/211 (39%), Gaps = 29/211 (13%)
Query: 365 RGSGMG---APTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKL 421
R G G A + RRL ++ E EV + ++HPNI+ L + + +
Sbjct: 46 RQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 105
Query: 422 LISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKS 481
LI + + G L+ L S L + + + G+ Y+H ++ H ++K
Sbjct: 106 LILELVSGGELFDFLAEKES-----LTEDEATQFLKQILDGVHYLH---SKRIAHFDLKP 157
Query: 482 TKILLDDELHPC----ISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEAR 537
I+L D+ P + FG+ + NE GT ++APE
Sbjct: 158 ENIMLLDKNVPNPRIKLIDFGIAHKIEAG-----NEFKNIFGTPE--------FVAPEIV 204
Query: 538 IYGSKFTQKCDVYSFGIVLLEILTGRLPDAG 568
Y + D++S G++ +L+G P G
Sbjct: 205 NY-EPLGLEADMWSIGVITYILLSGASPFLG 234
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 85/203 (41%), Gaps = 27/203 (13%)
Query: 371 APTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNG 430
A +VAV+ + G+ ++ + E+ ++HPNIVR K ++ ++ G
Sbjct: 43 ANELVAVKYIERGEKI--DENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGG 100
Query: 431 SLYAAL-HAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDE 489
L+ + +AG EAR Q + G+ Y H + H ++K LLD
Sbjct: 101 ELFERICNAGRFSE-----DEARFFFQQLIS-GVSYAHAM---QVAHRDLKLENTLLDGS 151
Query: 490 LHP--CISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKC 547
P I+ FG ++ + V ++ GT + Y+APE + +
Sbjct: 152 PAPRLKIADFGYSK-----ASVLHSQPKSAVGTPA--------YIAPEVLLKKEYDGKVA 198
Query: 548 DVYSFGIVLLEILTGRLPDAGPE 570
DV+S G+ L +L G P PE
Sbjct: 199 DVWSCGVTLYVMLVGAYPFEDPE 221
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 95/249 (38%), Gaps = 61/249 (24%)
Query: 341 DLLRASAYVVGKSKNGIMYKVVVGRGS-GMGAPTV-------VAVRRLTEGDATWRFKDF 392
+++R + VG + Y +G G+ GM VA+++++ + +
Sbjct: 16 EMVRGQVFDVGPRYTNLSY---IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT 72
Query: 393 ESEVEAIARVQHPNIV------------RLKAFYYAND------EKLLISDFIRNGSLYA 434
E++ + R +H NI+ ++K Y D KLL + + N +
Sbjct: 73 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY 132
Query: 435 ALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCI 494
L+ RGL YIH + +H ++K + +LL+ I
Sbjct: 133 FLYQ--------------------ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKI 169
Query: 495 SGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGI 554
FGL R+ T + +R Y APE + +T+ D++S G
Sbjct: 170 CDFGLARVADPDHDHT---GFLXEXVATRW------YRAPEIMLNSKGYTKSIDIWSVGC 220
Query: 555 VLLEILTGR 563
+L E+L+ R
Sbjct: 221 ILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 95/249 (38%), Gaps = 61/249 (24%)
Query: 341 DLLRASAYVVGKSKNGIMYKVVVGRGS-GMGAPTV-------VAVRRLTEGDATWRFKDF 392
+++R + VG + Y +G G+ GM VA+++++ + +
Sbjct: 17 EMVRGQVFDVGPRYTNLSY---IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT 73
Query: 393 ESEVEAIARVQHPNIV------------RLKAFYYAND------EKLLISDFIRNGSLYA 434
E++ + R +H NI+ ++K Y D KLL + + N +
Sbjct: 74 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY 133
Query: 435 ALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCI 494
L+ RGL YIH + +H ++K + +LL+ I
Sbjct: 134 FLYQ--------------------ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKI 170
Query: 495 SGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGI 554
FGL R+ T + +R Y APE + +T+ D++S G
Sbjct: 171 CDFGLARVADPDHDHT---GFLXEXVATRW------YRAPEIMLNSKGYTKSIDIWSVGC 221
Query: 555 VLLEILTGR 563
+L E+L+ R
Sbjct: 222 ILAEMLSNR 230
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 47/103 (45%), Gaps = 18/103 (17%)
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
+GL YIH +H ++K + ++++ I FGL R + +
Sbjct: 139 KGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLAR---------------QADS 180
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
++ Y APE + ++TQ D++S G ++ E++TG+
Sbjct: 181 EMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 99/249 (39%), Gaps = 51/249 (20%)
Query: 344 RASAYVVGKSKNGI--MYKV--VVGRGSGMGAPTVVA----VRRLTEGDATWRFKD---F 392
R + Y G +K I Y + +GRGS V +RR + + +D F
Sbjct: 11 RENLYFQGSTKGDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRF 70
Query: 393 ESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYA-ALHA---GPSDSLPPLP 448
+ E+E + + HPNI+RL + N + L+ + G L+ +H SD+
Sbjct: 71 KQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDA----- 125
Query: 449 WEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILL--DDELHPC-ISGFGL-NRLLP 504
+I + + Y H+ + H ++K L D P + FGL R P
Sbjct: 126 ----ARIMKDVLSAVAYCHKLN---VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKP 178
Query: 505 GTSKVTKNETIVTSGTGSRISAISNVYLAPEAR--IYGSKFTQKCDVYSFGIVLLEILTG 562
G TK T Y++P+ +YG +CD +S G+++ +L G
Sbjct: 179 GKMMRTKVGT--------------PYYVSPQVLEGLYGP----ECDEWSAGVMMYVLLCG 220
Query: 563 RLPDAGPEN 571
P + P +
Sbjct: 221 YPPFSAPTD 229
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 78/198 (39%), Gaps = 29/198 (14%)
Query: 371 APTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNG 430
A ++ ++L+ D F+ E E ++QHPNIVRL L+ D + G
Sbjct: 58 AAKIINTKKLSARD----FQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGG 113
Query: 431 SLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDEL 490
L+ + A S Q + Y H VH N+K +LL +
Sbjct: 114 ELFEDIVAREFYSEADAS-----HCIQQILESIAYCHS---NGIVHRNLKPENLLLASKA 165
Query: 491 HPC---ISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKC 547
++ FGL + N++ G A + YL+PE + +++
Sbjct: 166 KGAAVKLADFGL--------AIEVNDSEAWHGF-----AGTPGYLSPEV-LKKDPYSKPV 211
Query: 548 DVYSFGIVLLEILTGRLP 565
D+++ G++L +L G P
Sbjct: 212 DIWACGVILYILLVGYPP 229
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 76/179 (42%), Gaps = 27/179 (15%)
Query: 392 FESEVEAIARVQHPNIVRLKAFYYANDEKLL--ISDFIRNGSLYAALHAGPSDSLPPLPW 449
F E + +A P +V+L FY D++ L + +++ G L + S+ P W
Sbjct: 116 FWEERDIMAFANSPWVVQL--FYAFQDDRYLYMVMEYMPGGDLVNLM----SNYDVPEKW 169
Query: 450 EARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKV 509
AR A+ L IH ++H ++K +LLD H ++ F GT
Sbjct: 170 -ARFYTAE-VVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADF-------GTCMK 217
Query: 510 TKNETIVTSGTGSRISAISNVYLAPEA-RIYGSK--FTQKCDVYSFGIVLLEILTGRLP 565
E +V T Y++PE + G + ++CD +S G+ L E+L G P
Sbjct: 218 MNKEGMVRCDTAVGTPD----YISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 272
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 83/188 (44%), Gaps = 27/188 (14%)
Query: 390 KDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLP 448
+D E+E + R QHPNI+ LK Y ++++ ++ G L + S
Sbjct: 60 RDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFS----E 115
Query: 449 WEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDEL----HPCISGFGLNRLLP 504
EA + T + + Y+H + VH ++K + IL DE I FG + L
Sbjct: 116 REASAVLFTIT-KTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLR 171
Query: 505 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRL 564
+N ++T + ++APE + + CD++S G++L +LTG
Sbjct: 172 A-----ENGLLMTPCYTAN-------FVAPEV-LERQGYDAACDIWSLGVLLYTMLTGYT 218
Query: 565 PDA-GPEN 571
P A GP++
Sbjct: 219 PFANGPDD 226
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 78/179 (43%), Gaps = 27/179 (15%)
Query: 392 FESEVEAIARVQHPNIVRLKAFYYANDEKLL--ISDFIRNGSLYAALHAGPSDSLPPLPW 449
F E + +A P +V+L FY D++ L + +++ G L + S+ P W
Sbjct: 121 FWEERDIMAFANSPWVVQL--FYAFQDDRYLYMVMEYMPGGDLVNLM----SNYDVPEKW 174
Query: 450 EARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKV 509
AR A+ L IH ++H ++K +LLD H ++ F GT
Sbjct: 175 -ARFYTAE-VVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADF-------GTCMK 222
Query: 510 TKNETIVTSGTGSRISAISNVYLAPEA-RIYGSK--FTQKCDVYSFGIVLLEILTGRLP 565
E +V T + + Y++PE + G + ++CD +S G+ L E+L G P
Sbjct: 223 MNKEGMVRCDT----AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 92/226 (40%), Gaps = 25/226 (11%)
Query: 355 NGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKD--FESEVEAIARVQHPNIV-RLK 411
+ + K ++GRGS +A + TE + + + FE ++ ++ I+ RLK
Sbjct: 26 DNYIIKHLIGRGSY--GYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLK 83
Query: 412 AFYYANDEKLLI-SDFIRNGSLYAALHAGPSD-----SLPPLPWEARLK-IAQGTARGLM 464
+ Y L+I D ++ LY L SD P E +K I G
Sbjct: 84 SDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGEN 143
Query: 465 YIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPG------TSKVTKNETIVTS 518
+IHE +H ++K LL+ + + FGL R + + + +NE
Sbjct: 144 FIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPH 200
Query: 519 GTGSRISAISNV----YLAPEARIYGSKFTQKCDVYSFGIVLLEIL 560
+ S+V Y APE + +T+ D++S G + E+L
Sbjct: 201 NKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELL 246
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 18/103 (17%)
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
RGL YIH +H ++K + + ++++ I FGL R T +E +T
Sbjct: 165 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH-------TDDE--MTGYV 212
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
+R Y APE + + D++S G ++ E+LTGR
Sbjct: 213 ATRW------YRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 86/220 (39%), Gaps = 31/220 (14%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK ++ + V A ++ ++L+ D F+ E E ++QHPNIVR
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD----FQKLEREARICRKLQHPNIVR 69
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLK-IAQGTARGLMYIHE 468
L L+ D + G L+ + A S EA Q + Y H
Sbjct: 70 LHDSIQEESFHYLVFDLVTGGELFEDIVAREFYS------EADASHCIQQILESIAYCHS 123
Query: 469 YSPRKYVHGNIKSTKILLDDELHPC---ISGFGLNRLLPGTSKVTKNETIVTSGTGSRIS 525
VH N+K +LL + ++ FGL + N++ G
Sbjct: 124 ---NGIVHRNLKPENLLLASKAKGAAVKLADFGL--------AIEVNDSEAWHGFAG--- 169
Query: 526 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
+ YL+PE + +++ D+++ G++L +L G P
Sbjct: 170 --TPGYLSPEV-LKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 86/220 (39%), Gaps = 31/220 (14%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK ++ + V A ++ ++L+ D F+ E E ++QHPNIVR
Sbjct: 13 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD----FQKLEREARICRKLQHPNIVR 68
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLK-IAQGTARGLMYIHE 468
L L+ D + G L+ + A S EA Q + Y H
Sbjct: 69 LHDSIQEESFHYLVFDLVTGGELFEDIVAREFYS------EADASHCIQQILESIAYCHS 122
Query: 469 YSPRKYVHGNIKSTKILLDDELHPC---ISGFGLNRLLPGTSKVTKNETIVTSGTGSRIS 525
VH N+K +LL + ++ FGL + N++ G
Sbjct: 123 ---NGIVHRNLKPENLLLASKAKGAAVKLADFGL--------AIEVNDSEAWHGFAG--- 168
Query: 526 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
+ YL+PE + +++ D+++ G++L +L G P
Sbjct: 169 --TPGYLSPEV-LKKDPYSKPVDIWACGVILYILLVGYPP 205
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 83/200 (41%), Gaps = 20/200 (10%)
Query: 391 DFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWE 450
DF EV A+ + H N++RL K ++++ GSL L L
Sbjct: 61 DFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLG---- 115
Query: 451 ARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVT 510
+ A A G+ Y+ ++++H ++ + +LL I FGL R LP
Sbjct: 116 TLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALP------ 166
Query: 511 KNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGP 569
+N+ ++ + APE+ + F+ D + FG+ L E+ T G+ P G
Sbjct: 167 QNDDHYVMQEHRKVPF---AWCAPES-LKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGL 222
Query: 570 ENDGKGLESLVRKAFRERRP 589
N + L + ++ R RP
Sbjct: 223 -NGSQILHKIDKEGERLPRP 241
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 76/183 (41%), Gaps = 26/183 (14%)
Query: 390 KDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPW 449
++ E EV + +V HPNI+ L Y + +LI + + G L+ L S L
Sbjct: 60 EEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKES-----LSE 114
Query: 450 EARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPC----ISGFGLNRLLPG 505
E + G+ Y+H +K H ++K I+L D+ P + FGL +
Sbjct: 115 EEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED 171
Query: 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
+ KN GT ++APE Y + D++S G++ +L+G P
Sbjct: 172 GVEF-KN----IFGTPE--------FVAPEIVNY-EPLGLEADMWSIGVITYILLSGASP 217
Query: 566 DAG 568
G
Sbjct: 218 FLG 220
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 86/220 (39%), Gaps = 31/220 (14%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK ++ + V A ++ ++L+ D F+ E E ++QHPNIVR
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD----FQKLEREARICRKLQHPNIVR 69
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLK-IAQGTARGLMYIHE 468
L L+ D + G L+ + A S EA Q + Y H
Sbjct: 70 LHDSIQEESFHYLVFDLVTGGELFEDIVAREFYS------EADASHCIQQILESIAYCHS 123
Query: 469 YSPRKYVHGNIKSTKILLDDELHPC---ISGFGLNRLLPGTSKVTKNETIVTSGTGSRIS 525
VH N+K +LL + ++ FGL + N++ G
Sbjct: 124 ---NGIVHRNLKPENLLLASKAKGAAVKLADFGL--------AIEVNDSEAWHGFAG--- 169
Query: 526 AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
+ YL+PE + +++ D+++ G++L +L G P
Sbjct: 170 --TPGYLSPEV-LKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 78/179 (43%), Gaps = 27/179 (15%)
Query: 392 FESEVEAIARVQHPNIVRLKAFYYANDEKLL--ISDFIRNGSLYAALHAGPSDSLPPLPW 449
F E + +A P +V+L FY D++ L + +++ G L + S+ P W
Sbjct: 121 FWEERDIMAFANSPWVVQL--FYAFQDDRYLYMVMEYMPGGDLVNLM----SNYDVPEKW 174
Query: 450 EARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKV 509
AR A+ L IH ++H ++K +LLD H ++ F GT
Sbjct: 175 -ARFYTAE-VVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADF-------GTCMK 222
Query: 510 TKNETIVTSGTGSRISAISNVYLAPEA-RIYGSK--FTQKCDVYSFGIVLLEILTGRLP 565
E +V T + + Y++PE + G + ++CD +S G+ L E+L G P
Sbjct: 223 MNKEGMVRCDT----AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 83/200 (41%), Gaps = 20/200 (10%)
Query: 391 DFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWE 450
DF EV A+ + H N++RL K ++++ GSL L L
Sbjct: 57 DFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFL----LG 111
Query: 451 ARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVT 510
+ A A G+ Y+ ++++H ++ + +LL I FGL R LP
Sbjct: 112 TLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALP------ 162
Query: 511 KNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGP 569
+N+ ++ + APE+ + F+ D + FG+ L E+ T G+ P G
Sbjct: 163 QNDDHXVMQEHRKVPF---AWCAPES-LKTRTFSHASDTWMFGVTLWEMFTYGQEPWIG- 217
Query: 570 ENDGKGLESLVRKAFRERRP 589
N + L + ++ R RP
Sbjct: 218 LNGSQILHKIDKEGERLPRP 237
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 111/273 (40%), Gaps = 36/273 (13%)
Query: 368 GMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFI 427
G T V ++ L + + FE+ ++++ H ++V DE +L+ +F+
Sbjct: 36 GQLHETEVLLKVLDKAHRNYSESFFEA-ASMMSKLSHKHLVLNYGVCVCGDENILVQEFV 94
Query: 428 RNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLD 487
+ GSL L + + + W +L++A+ A + ++ E + +HGN+ + ILL
Sbjct: 95 KFGSLDTYLKK--NKNCINILW--KLEVAKQLAAAMHFLEENT---LIHGNVCAKNILLI 147
Query: 488 DELHPCISGFGLNRLL-PGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQK 546
E +L PG S + I+ RI ++ PE
Sbjct: 148 REEDRKTGNPPFIKLSDPGISITVLPKDILQE----RIP-----WVPPECIENPKNLNLA 198
Query: 547 CDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKR 606
D +SFG L EI +G + L+S + F E R ++ P K
Sbjct: 199 TDKWSFGTTLWEICSG------GDKPLSALDSQRKLQFYEDR--HQLPAP--------KA 242
Query: 607 QVLATFHIALNCTELDPEFRPRMRTVSESLDRV 639
LA ++ NC + +P+ RP R + L+ +
Sbjct: 243 AELA--NLINNCMDYEPDHRPSFRAIIRDLNSL 273
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 83/200 (41%), Gaps = 20/200 (10%)
Query: 391 DFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWE 450
DF EV A+ + H N++RL K ++++ GSL L L
Sbjct: 67 DFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFL----LG 121
Query: 451 ARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVT 510
+ A A G+ Y+ ++++H ++ + +LL I FGL R LP
Sbjct: 122 TLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALP------ 172
Query: 511 KNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGP 569
+N+ ++ + APE+ + F+ D + FG+ L E+ T G+ P G
Sbjct: 173 QNDDHXVMQEHRKVPF---AWCAPES-LKTRTFSHASDTWMFGVTLWEMFTYGQEPWIG- 227
Query: 570 ENDGKGLESLVRKAFRERRP 589
N + L + ++ R RP
Sbjct: 228 LNGSQILHKIDKEGERLPRP 247
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 83/200 (41%), Gaps = 20/200 (10%)
Query: 391 DFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWE 450
DF EV A+ + H N++RL K ++++ GSL L L
Sbjct: 57 DFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLG---- 111
Query: 451 ARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVT 510
+ A A G+ Y+ ++++H ++ + +LL I FGL R LP
Sbjct: 112 TLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALP------ 162
Query: 511 KNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGP 569
+N+ ++ + APE+ + F+ D + FG+ L E+ T G+ P G
Sbjct: 163 QNDDHYVMQEHRKVPF---AWCAPES-LKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGL 218
Query: 570 ENDGKGLESLVRKAFRERRP 589
N + L + ++ R RP
Sbjct: 219 -NGSQILHKIDKEGERLPRP 237
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 83/200 (41%), Gaps = 20/200 (10%)
Query: 391 DFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWE 450
DF EV A+ + H N++RL K ++++ GSL L L
Sbjct: 57 DFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFL----LG 111
Query: 451 ARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVT 510
+ A A G+ Y+ ++++H ++ + +LL I FGL R LP
Sbjct: 112 TLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALP------ 162
Query: 511 KNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGP 569
+N+ ++ + APE+ + F+ D + FG+ L E+ T G+ P G
Sbjct: 163 QNDDHYVMQEHRKVPF---AWCAPES-LKTRTFSHASDTWMFGVTLWEMFTYGQEPWIG- 217
Query: 570 ENDGKGLESLVRKAFRERRP 589
N + L + ++ R RP
Sbjct: 218 LNGSQILHKIDKEGERLPRP 237
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 83/200 (41%), Gaps = 20/200 (10%)
Query: 391 DFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWE 450
DF EV A+ + H N++RL K ++++ GSL L L
Sbjct: 67 DFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFL----LG 121
Query: 451 ARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVT 510
+ A A G+ Y+ ++++H ++ + +LL I FGL R LP
Sbjct: 122 TLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALP------ 172
Query: 511 KNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGP 569
+N+ ++ + APE+ + F+ D + FG+ L E+ T G+ P G
Sbjct: 173 QNDDHYVMQEHRKVPF---AWCAPES-LKTRTFSHASDTWMFGVTLWEMFTYGQEPWIG- 227
Query: 570 ENDGKGLESLVRKAFRERRP 589
N + L + ++ R RP
Sbjct: 228 LNGSQILHKIDKEGERLPRP 247
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 83/200 (41%), Gaps = 20/200 (10%)
Query: 391 DFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWE 450
DF EV A+ + H N++RL K ++++ GSL L L
Sbjct: 61 DFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLG---- 115
Query: 451 ARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVT 510
+ A A G+ Y+ ++++H ++ + +LL I FGL R LP
Sbjct: 116 TLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALP------ 166
Query: 511 KNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGP 569
+N+ ++ + APE+ + F+ D + FG+ L E+ T G+ P G
Sbjct: 167 QNDDHYVMQEHRKVPF---AWCAPES-LKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGL 222
Query: 570 ENDGKGLESLVRKAFRERRP 589
N + L + ++ R RP
Sbjct: 223 -NGSQILHKIDKEGERLPRP 241
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 95/222 (42%), Gaps = 26/222 (11%)
Query: 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFE---SEVEAIARV-QH 404
V+G G ++ +V + SG + A++ L + + K E +E + + + Q
Sbjct: 61 VLGTGAYGKVF--LVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQS 118
Query: 405 PNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLM 464
P +V L + + LI D+I G L+ L S E ++ + + L
Sbjct: 119 PFLVTLHYAFQTETKLHLILDYINGGELFTHL----SQRERFTEHEVQIYVGE-IVLALE 173
Query: 465 YIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRI 524
++H+ ++ +IK ILLD H ++ FGL++ + +ET I
Sbjct: 174 HLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSK------EFVADETERAYDFCGTI 224
Query: 525 SAISNVYLAPE-ARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
Y+AP+ R S + D +S G+++ E+LTG P
Sbjct: 225 E-----YMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASP 261
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 18/103 (17%)
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
RGL YIH +H ++K + + ++++ I FGL R + + +T
Sbjct: 134 RGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLAR---------QADEEMTGYV 181
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
+R Y APE + + Q D++S G ++ E+L G+
Sbjct: 182 ATRW------YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 18/103 (17%)
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
RGL YIH +H ++K + + ++++ I F L R T +E +T
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFYLARH-------TDDE--MTGYV 183
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
+R Y APE + + Q D++S G ++ E+LTGR
Sbjct: 184 ATRW------YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 90/226 (39%), Gaps = 47/226 (20%)
Query: 363 VGRGSGMGAPTVVA----VRRLTEGDATWRFKD---FESEVEAIARVQHPNIVRLKAFYY 415
+GRGS V +RR + + +D F+ E+E + + HPNI+RL +
Sbjct: 17 IGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFE 76
Query: 416 ANDEKLLISDFIRNGSLYA-ALHA---GPSDSLPPLPWEARLKIAQGTARGLMYIHEYSP 471
N + L+ + G L+ +H SD+ +I + + Y H+ +
Sbjct: 77 DNTDIYLVMELCTGGELFERVVHKRVFRESDA---------ARIMKDVLSAVAYCHKLN- 126
Query: 472 RKYVHGNIKSTKILL--DDELHPC-ISGFGL-NRLLPGTSKVTKNETIVTSGTGSRISAI 527
H ++K L D P + FGL R PG TK T
Sbjct: 127 --VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGT------------- 171
Query: 528 SNVYLAPEAR--IYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEN 571
Y++P+ +YG +CD +S G+++ +L G P + P +
Sbjct: 172 -PYYVSPQVLEGLYGP----ECDEWSAGVMMYVLLCGYPPFSAPTD 212
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 18/103 (17%)
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
RGL YIH +H ++K + + ++++ I GL R T +E +T
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDAGLARH-------TDDE--MTGYV 183
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
+R Y APE + + Q D++S G ++ E+LTGR
Sbjct: 184 ATRW------YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 102/251 (40%), Gaps = 20/251 (7%)
Query: 341 DLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIA 400
DL + Y S G +Y ++ GSG G+ V V + ++ + E
Sbjct: 12 DLGTENLYFQSMSVKGRIYSILKQIGSG-GSSKVFQVLNEKKQIYAIKYVNLEEADNQTL 70
Query: 401 RVQHPNIVRLKAFYYANDEKLLISDF-IRNGSLYAALHAGPSDSLPPL-------PWEAR 452
I L +D+ + + D+ I + +Y + G D L PWE R
Sbjct: 71 DSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWE-R 129
Query: 453 LKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGL-NRLLPGTSKVTK 511
+ + IH++ VH ++K L+ D + I FG+ N++ P T+ V K
Sbjct: 130 KSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGMLKLID-FGIANQMQPDTTSVVK 185
Query: 512 NETIVTSGTGSRI--SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGP 569
+ + GT + + AI ++ + E SK + K DV+S G +L + G+ P
Sbjct: 186 DSQV---GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI 242
Query: 570 ENDGKGLESLV 580
N L +++
Sbjct: 243 INQISKLHAII 253
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 74/171 (43%), Gaps = 17/171 (9%)
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLK 454
E + +A+V IV L + + L+ + G + ++ D+ A
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 455 IAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNET 514
AQ GL ++H+ R ++ ++K +LLDD+ + IS GL L K + +T
Sbjct: 295 TAQ-IVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVEL----KAGQTKT 346
Query: 515 IVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
+GT ++APE + G ++ D ++ G+ L E++ R P
Sbjct: 347 KGYAGTPG--------FMAPEL-LLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 74/171 (43%), Gaps = 17/171 (9%)
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLK 454
E + +A+V IV L + + L+ + G + ++ D+ A
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 455 IAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNET 514
AQ GL ++H+ R ++ ++K +LLDD+ + IS GL L K + +T
Sbjct: 295 TAQ-IVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVEL----KAGQTKT 346
Query: 515 IVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
+GT ++APE + G ++ D ++ G+ L E++ R P
Sbjct: 347 KGYAGTPG--------FMAPEL-LLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 74/171 (43%), Gaps = 17/171 (9%)
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLK 454
E + +A+V IV L + + L+ + G + ++ D+ A
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 455 IAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNET 514
AQ GL ++H+ R ++ ++K +LLDD+ + IS GL L K + +T
Sbjct: 295 TAQ-IVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVEL----KAGQTKT 346
Query: 515 IVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
+GT ++APE + G ++ D ++ G+ L E++ R P
Sbjct: 347 KGYAGTPG--------FMAPEL-LLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 78/175 (44%), Gaps = 29/175 (16%)
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLK 454
E++ + + HPNI+ L + L+ DF+ + S L P +A +
Sbjct: 62 EIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETD--LEVIIKDNSLVLTPSHIKAYML 119
Query: 455 IAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNET 514
+ T +GL Y+H++ +H ++K +LLD+ ++ FGL + ++ ++
Sbjct: 120 M---TLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQV 173
Query: 515 IVTSGTGSRISAISNVYLAPE----ARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
++ Y APE AR+YG D+++ G +L E+L R+P
Sbjct: 174 ------------VTRWYRAPELLFGARMYGV----GVDMWAVGCILAELLL-RVP 211
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 18/103 (17%)
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
RGL YIH +H ++K + + ++++ I L+R G ++ T +E +T
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKI----LDR---GLARHTDDE--MTGYV 183
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
+R Y APE + + Q D++S G ++ E+LTGR
Sbjct: 184 ATRW------YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 74/171 (43%), Gaps = 17/171 (9%)
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLK 454
E + +A+V IV L + + L+ + G + ++ D+ A
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 455 IAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNET 514
AQ GL ++H+ R ++ ++K +LLDD+ + IS GL L K + +T
Sbjct: 295 TAQ-IVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVEL----KAGQTKT 346
Query: 515 IVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
+GT ++APE + G ++ D ++ G+ L E++ R P
Sbjct: 347 KGYAGTPG--------FMAPEL-LLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 18/103 (17%)
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
RGL YIH +H ++K + + ++++ I FGL R + + +T
Sbjct: 142 RGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLAR---------QADEEMTGYV 189
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
+R Y APE + + Q D++S G ++ E+L G+
Sbjct: 190 ATRW------YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 18/103 (17%)
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
RGL YIH +H ++K + + ++++ I FGL R + + +T
Sbjct: 142 RGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLAR---------QADEEMTGYV 189
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
+R Y APE + + Q D++S G ++ E+L G+
Sbjct: 190 ATRW------YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 72/163 (44%), Gaps = 25/163 (15%)
Query: 410 LKAFYYA-NDEK--LLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYI 466
+ A +YA DE L+ D+ G L L + D LP AR I + ++ I
Sbjct: 136 ITALHYAFQDENHLYLVMDYYVGGDLLTLL-SKFEDKLPEDM--ARFYIGEM----VLAI 188
Query: 467 HEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISA 526
YVH +IK +LLD H ++ FG K+ + T+ +S ++
Sbjct: 189 DSIHQLHYVHRDIKPDNVLLDVNGHIRLADFG------SCLKMNDDGTVQSS-----VAV 237
Query: 527 ISNVYLAPE---ARIYG-SKFTQKCDVYSFGIVLLEILTGRLP 565
+ Y++PE A G K+ +CD +S G+ + E+L G P
Sbjct: 238 GTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 280
>pdb|2JII|A Chain A, Structure Of Vaccinia Related Kinase 3
pdb|2JII|B Chain B, Structure Of Vaccinia Related Kinase 3
Length = 352
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 59/138 (42%), Gaps = 16/138 (11%)
Query: 431 SLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLD--D 488
SL +AL P L + L++A L ++HE +YVHGN+ + I +D D
Sbjct: 143 SLQSALDVSPKHVLSE---RSVLQVACRLLDALEFLHE---NEYVHGNVTAENIFVDPED 196
Query: 489 ELHPCISGFGLN-RLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKC 547
+ ++G+G R P V E GSR ++ G +++
Sbjct: 197 QSQVTLAGYGFAFRYCPSGKHVAYVE-------GSRSPHEGDLEFISMDLHKGCGPSRRS 249
Query: 548 DVYSFGIVLLEILTGRLP 565
D+ S G +L+ L G LP
Sbjct: 250 DLQSLGYCMLKWLYGFLP 267
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 89/217 (41%), Gaps = 33/217 (15%)
Query: 362 VVGRGS--------GMGAPTVVAVRRLTEGDATWRFKD--FESEVEAIARVQHPNIVRLK 411
V+GRG+ + V A++ L++ + R F E + +A P +V+L
Sbjct: 82 VIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 141
Query: 412 AFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSP 471
+ + ++ +++ G L + S+ P W A+ A+ L IH
Sbjct: 142 CAFQDDKYLYMVMEYMPGGDLVNLM----SNYDVPEKW-AKFYTAE-VVLALDAIHSMG- 194
Query: 472 RKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVY 531
+H ++K +LLD H ++ FG + T V + + T Y
Sbjct: 195 --LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPD-----------Y 241
Query: 532 LAPEA-RIYGSK--FTQKCDVYSFGIVLLEILTGRLP 565
++PE + G + ++CD +S G+ L E+L G P
Sbjct: 242 ISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTP 278
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 73/163 (44%), Gaps = 25/163 (15%)
Query: 410 LKAFYYA-NDEK--LLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYI 466
+ A +YA DE L+ D+ G L L + D LP AR I + + I
Sbjct: 152 ITALHYAFQDENHLYLVMDYYVGGDLLTLL-SKFEDKLPEDM--ARFYIGE-MVLAIDSI 207
Query: 467 HEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISA 526
H+ YVH +IK +LLD H ++ FG K+ + T+ +S ++
Sbjct: 208 HQL---HYVHRDIKPDNVLLDVNGHIRLADFG------SCLKMNDDGTVQSS-----VAV 253
Query: 527 ISNVYLAPE---ARIYG-SKFTQKCDVYSFGIVLLEILTGRLP 565
+ Y++PE A G K+ +CD +S G+ + E+L G P
Sbjct: 254 GTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 296
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 18/103 (17%)
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
RGL YIH +H ++K + + ++++ I GL R T +E +T
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDGGLARH-------TDDE--MTGYV 183
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
+R Y APE + + Q D++S G ++ E+LTGR
Sbjct: 184 ATRW------YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 89/215 (41%), Gaps = 29/215 (13%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+G+ G++YK G A + + + EG + + E+ + ++H NIV+
Sbjct: 10 IGEGTYGVVYKAQNNYGETF-ALKKIRLEKEDEGIPSTTIR----EISILKELKHSNIVK 64
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHA--GPSDSLPPLPWEARLKIAQGTARGLMYIH 467
L + +L+ + + + L L G +S+ + +L G+ Y H
Sbjct: 65 LYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQL------LNGIAYCH 117
Query: 468 EYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAI 527
+ R+ +H ++K +L++ E I+ FGL R + +E +
Sbjct: 118 D---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLW--------- 165
Query: 528 SNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTG 562
Y AP+ + K++ D++S G + E++ G
Sbjct: 166 ---YRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 89/215 (41%), Gaps = 29/215 (13%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+G+ G++YK G A + + + EG + + E+ + ++H NIV+
Sbjct: 10 IGEGTYGVVYKAQNNYGETF-ALKKIRLEKEDEGIPSTTIR----EISILKELKHSNIVK 64
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHA--GPSDSLPPLPWEARLKIAQGTARGLMYIH 467
L + +L+ + + + L L G +S+ + +L G+ Y H
Sbjct: 65 LYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQL------LNGIAYCH 117
Query: 468 EYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAI 527
+ R+ +H ++K +L++ E I+ FGL R G IVT
Sbjct: 118 D---RRVLHRDLKPQNLLINREGELKIADFGLARAF-GIPVRKYTHEIVTLW-------- 165
Query: 528 SNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTG 562
Y AP+ + K++ D++S G + E++ G
Sbjct: 166 ---YRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 89/215 (41%), Gaps = 29/215 (13%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+G+ G++YK G A + + + EG + + E+ + ++H NIV+
Sbjct: 10 IGEGTYGVVYKAQNNYGETF-ALKKIRLEKEDEGIPSTTIR----EISILKELKHSNIVK 64
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHA--GPSDSLPPLPWEARLKIAQGTARGLMYIH 467
L + +L+ + + + L L G +S+ + +L G+ Y H
Sbjct: 65 LYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQL------LNGIAYCH 117
Query: 468 EYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAI 527
+ R+ +H ++K +L++ E I+ FGL R + +E +
Sbjct: 118 D---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLW--------- 165
Query: 528 SNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTG 562
Y AP+ + K++ D++S G + E++ G
Sbjct: 166 ---YRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 45/103 (43%), Gaps = 18/103 (17%)
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
+GL YIH VH ++K + ++++ I FGL R T
Sbjct: 137 KGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADA------------EMT 181
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
G ++ Y APE + + Q D++S G ++ E+LTG+
Sbjct: 182 GY---VVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 45/103 (43%), Gaps = 18/103 (17%)
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
+GL YIH VH ++K + ++++ I FGL R T
Sbjct: 155 KGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADA------------EMT 199
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
G ++ Y APE + + Q D++S G ++ E+LTG+
Sbjct: 200 GY---VVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 59/113 (52%), Gaps = 14/113 (12%)
Query: 453 LKIAQGTARGLMYIHEYSPRKYVHGNIKSTKIL--LDDELHPCISGFGLNRLLPGTSKVT 510
L I A + ++H + +H ++K + I +DD + + FGL + +
Sbjct: 167 LHIFIQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVK--VGDFGL---VTAMDQDE 218
Query: 511 KNETIVTS--GTGSRISAI-SNVYLAPEARIYGSKFTQKCDVYSFGIVLLEIL 560
+ +T++T + + + +Y++PE +I+G+ ++ K D++S G++L E+L
Sbjct: 219 EEQTVLTPMPAYATHXGQVGTKLYMSPE-QIHGNNYSHKVDIFSLGLILFELL 270
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 78/188 (41%), Gaps = 27/188 (14%)
Query: 390 KDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLP 448
+D E+E + R QHPNI+ LK Y ++++ + G L + S
Sbjct: 60 RDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFS----E 115
Query: 449 WEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDEL----HPCISGFGLNRLLP 504
EA + T + + Y+H + VH ++K + IL DE I FG + L
Sbjct: 116 REASAVLFTIT-KTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLR 171
Query: 505 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRL 564
+ + + ++APE + + CD++S G++L LTG
Sbjct: 172 AENGLLXTPCYTAN------------FVAPEV-LERQGYDAACDIWSLGVLLYTXLTGYT 218
Query: 565 PDA-GPEN 571
P A GP++
Sbjct: 219 PFANGPDD 226
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 87/233 (37%), Gaps = 46/233 (19%)
Query: 360 KVVVGRGS--------GMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV-RL 410
K ++GRGS A VA++++ + FE ++ ++ I+ RL
Sbjct: 33 KHLIGRGSYGYVYLAYDKNANKNVAIKKVN--------RMFEDLIDCKRILREITILNRL 84
Query: 411 KAFYYANDEKLLI-SDFIRNGSLYAALHAGPSD-----SLPPLPWEARLK-IAQGTARGL 463
K+ Y L+I D ++ LY L SD P E +K I G
Sbjct: 85 KSDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLGE 144
Query: 464 MYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVT------------- 510
+IHE +H ++K LL+ + I FGL R + +
Sbjct: 145 KFIHESG---IIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEE 201
Query: 511 ---KNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEIL 560
N+ + T ++ Y APE + +T D++S G + E+L
Sbjct: 202 PGPHNKNLKKQLTSH---VVTRWYRAPELILLQENYTNSIDIWSTGCIFAELL 251
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 72/175 (41%), Gaps = 33/175 (18%)
Query: 405 PNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEAR----LKIAQGTA 460
P ++ L Y E +LI ++ G ++ S LP L +++ +
Sbjct: 89 PRVINLHEVYENTSEIILILEYAAGGEIF-------SLCLPELAEMVSENDVIRLIKQIL 141
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPC----ISGFGLNRLLPGTSKVTKNETIV 516
G+ Y+H+ VH ++K ILL ++P I FG++R + ++ +
Sbjct: 142 EGVYYLHQ---NNIVHLDLKPQNILLSS-IYPLGDIKIVDFGMSRKIGHACELRE----- 192
Query: 517 TSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEN 571
GT YLAPE Y T D+++ GI+ +LT P G +N
Sbjct: 193 IMGTPE--------YLAPEILNY-DPITTATDMWNIGIIAYMLLTHTSPFVGEDN 238
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 35.8 bits (81), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 84/219 (38%), Gaps = 28/219 (12%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK ++ + V A ++ ++L+ D + E E ++HPNIVR
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARD----HQKLEREARICRLLKHPNIVR 74
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEY 469
L LI D + G L+ + A S Q +++ H+
Sbjct: 75 LHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADAS-----HCIQQILEAVLHCHQM 129
Query: 470 SPRKYVHGNIKSTKILLDDELHPC---ISGFGLNRLLPGTSKVTKNETIVTSGTGSRISA 526
VH N+K +LL +L ++ FGL + G + +GT
Sbjct: 130 G---VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFG----FAGTPG---- 178
Query: 527 ISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
YL+PE + + + D+++ G++L +L G P
Sbjct: 179 ----YLSPEV-LRKDPYGKPVDLWACGVILYILLVGYPP 212
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 35.8 bits (81), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 101/238 (42%), Gaps = 35/238 (14%)
Query: 355 NGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEV-EAIARVQHPNIVRLKAF 413
G V +G+ G VA++++ + RF++ E ++ + +A + HPNIV+L+++
Sbjct: 33 QGTFGTVQLGKEKSTGMS--VAIKKVIQDP---RFRNRELQIMQDLAVLHHPNIVQLQSY 87
Query: 414 YYANDEKL-------LISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYI 466
+Y E+ ++ +++ + +L+ + P P ++ + Q R + +
Sbjct: 88 FYTLGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQ-LIRSIGCL 145
Query: 467 HEYSPRKYVHGNIKSTKILL---DDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSR 523
H S H +IK +L+ D L C FG K++ +E V
Sbjct: 146 HLPSV-NVCHRDIKPHNVLVNEADGTLKLC--DFG------SAKKLSPSEPNVA------ 190
Query: 524 ISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVR 581
S Y APE +T D++S G + E++ G P +N L +VR
Sbjct: 191 -YICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGE-PIFRGDNSAGQLHEIVR 246
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 35.8 bits (81), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 74/180 (41%), Gaps = 27/180 (15%)
Query: 395 EVEAIARVQHPNIVRLKAFY--YANDEKLLISDFIRNGSLYA-ALHAGPSDSLPPLPWEA 451
E+ + ++HPN++ L+ + +A+ + L+ D+ + + H + P+
Sbjct: 68 EIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPV---- 123
Query: 452 RLKIAQGTARGLMY-----IHEYSPRKYVHGNIKSTKILLDDEL----HPCISGFGLNRL 502
++ +G + L+Y IH +H ++K IL+ E I+ G RL
Sbjct: 124 --QLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARL 181
Query: 503 LPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTG 562
K + V ++ Y APE + +T+ D+++ G + E+LT
Sbjct: 182 FNSPLKPLADLDPVV---------VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTS 232
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 35.8 bits (81), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 93/224 (41%), Gaps = 20/224 (8%)
Query: 353 SKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKA 412
S G +Y ++ GSG G+ V V + ++ + E I L
Sbjct: 52 SVKGRIYSILKQIGSG-GSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNK 110
Query: 413 FYYANDEKLLISDF-IRNGSLYAALHAGPSDSLPPL-------PWEARLKIAQGTARGLM 464
+D+ + + D+ I + +Y + G D L PWE R + +
Sbjct: 111 LQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWE-RKSYWKNMLEAVH 169
Query: 465 YIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGL-NRLLPGTSKVTKNETIVTSGTGSR 523
IH++ VH ++K L+ D + I FG+ N++ P T+ V K+ + GT +
Sbjct: 170 TIHQHG---IVHSDLKPANFLIVDGMLKLID-FGIANQMQPDTTSVVKDSQV---GTVNY 222
Query: 524 I--SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
+ AI ++ + E SK + K DV+S G +L + G+ P
Sbjct: 223 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 266
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 35.8 bits (81), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 71/191 (37%), Gaps = 50/191 (26%)
Query: 395 EVEAIARVQHPNIVRLKAF------YYANDEKLLISDFIRNGSLY---------AALHAG 439
E++ + ++ HPN+V + ND LL ++ G L L G
Sbjct: 63 EIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEG 122
Query: 440 PSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGL 499
P +L + L Y+HE + +H ++K I+L G
Sbjct: 123 PIRTL-----------LSDISSALRYLHE---NRIIHRDLKPENIVLQP---------GP 159
Query: 500 NRLLP-----GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGI 554
RL+ G +K + T G+ YLAPE + K+T D +SFG
Sbjct: 160 QRLIHKIIDLGYAKELDQGELCTEFVGTL------QYLAPEL-LEQKKYTVTVDYWSFGT 212
Query: 555 VLLEILTGRLP 565
+ E +TG P
Sbjct: 213 LAFECITGFRP 223
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 35.8 bits (81), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 81/185 (43%), Gaps = 27/185 (14%)
Query: 395 EVEAIARVQ-HPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARL 453
EVE + + Q + NI+ L F+ + L+ + ++ GS+ A +
Sbjct: 60 EVETLYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKH-----FNEREAS 114
Query: 454 KIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLD--DELHPC-ISGFGLN---RLLPGTS 507
++ + A L ++H + H ++K IL + +++ P I F L +L +
Sbjct: 115 RVVRDVAAALDFLH---TKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCT 171
Query: 508 KVTKNETIVTSGTGSRISAISNVYLAPEA-RIYGSKFT---QKCDVYSFGIVLLEILTGR 563
+T E G+ Y+APE ++ + T ++CD++S G+VL +L+G
Sbjct: 172 PITTPELTTPCGSAE--------YMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGY 223
Query: 564 LPDAG 568
P G
Sbjct: 224 PPFVG 228
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 35.8 bits (81), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 71/191 (37%), Gaps = 50/191 (26%)
Query: 395 EVEAIARVQHPNIVRLKAF------YYANDEKLLISDFIRNGSLY---------AALHAG 439
E++ + ++ HPN+V + ND LL ++ G L L G
Sbjct: 62 EIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEG 121
Query: 440 PSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGL 499
P +L + L Y+HE + +H ++K I+L G
Sbjct: 122 PIRTL-----------LSDISSALRYLHE---NRIIHRDLKPENIVLQP---------GP 158
Query: 500 NRLLP-----GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGI 554
RL+ G +K + T G+ YLAPE + K+T D +SFG
Sbjct: 159 QRLIHKIIDLGYAKELDQGELCTEFVGTL------QYLAPEL-LEQKKYTVTVDYWSFGT 211
Query: 555 VLLEILTGRLP 565
+ E +TG P
Sbjct: 212 LAFECITGFRP 222
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 35.8 bits (81), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 46/103 (44%), Gaps = 15/103 (14%)
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
RGL Y H +K +H ++K +L+++ ++ FGL R +K NE +
Sbjct: 111 RGLAYCHR---QKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLW-- 165
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
Y P+ + + ++ + D++ G + E+ TGR
Sbjct: 166 ----------YRPPDILLGSTDYSTQIDMWGVGCIFYEMATGR 198
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 35.4 bits (80), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 93/224 (41%), Gaps = 20/224 (8%)
Query: 353 SKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKA 412
S G +Y ++ GSG G+ V V + ++ + E I L
Sbjct: 52 SVKGRIYSILKQIGSG-GSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNK 110
Query: 413 FYYANDEKLLISDF-IRNGSLYAALHAGPSDSLPPL-------PWEARLKIAQGTARGLM 464
+D+ + + D+ I + +Y + G D L PWE R + +
Sbjct: 111 LQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWE-RKSYWKNMLEAVH 169
Query: 465 YIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGL-NRLLPGTSKVTKNETIVTSGTGSR 523
IH++ VH ++K L+ D + I FG+ N++ P T+ V K+ + GT +
Sbjct: 170 TIHQHG---IVHSDLKPANFLIVDGMLKLID-FGIANQMQPDTTSVVKDSQV---GTVNY 222
Query: 524 I--SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
+ AI ++ + E SK + K DV+S G +L + G+ P
Sbjct: 223 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 266
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 35.4 bits (80), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 93/224 (41%), Gaps = 20/224 (8%)
Query: 353 SKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKA 412
S G +Y ++ GSG G+ V V + ++ + E I L
Sbjct: 5 SVKGRIYSILKQIGSG-GSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNK 63
Query: 413 FYYANDEKLLISDF-IRNGSLYAALHAGPSDSLPPL-------PWEARLKIAQGTARGLM 464
+D+ + + D+ I + +Y + G D L PWE R + +
Sbjct: 64 LQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWE-RKSYWKNMLEAVH 122
Query: 465 YIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGL-NRLLPGTSKVTKNETIVTSGTGSR 523
IH++ VH ++K L+ D + I FG+ N++ P T+ V K+ + GT +
Sbjct: 123 TIHQHG---IVHSDLKPANFLIVDGMLKLID-FGIANQMQPDTTSVVKDSQV---GTVNY 175
Query: 524 I--SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
+ AI ++ + E SK + K DV+S G +L + G+ P
Sbjct: 176 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 219
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 35.4 bits (80), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 72/182 (39%), Gaps = 22/182 (12%)
Query: 388 RFKDFESE-VEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPP 446
R + F +E + A A + P IV L + + + GSL +
Sbjct: 127 RLEVFRAEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGC----- 181
Query: 447 LPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILL-DDELHPCISGFGLNRLLP- 504
LP + L GL Y+H R+ +HG++K+ +LL D H + FG L
Sbjct: 182 LPEDRALYYLGQALEGLEYLHS---RRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQP 238
Query: 505 -GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563
G K TG I + ++APE + G K DV+S ++L +L G
Sbjct: 239 DGLGKSLL--------TGDYIPG-TETHMAPEV-VLGRSCDAKVDVWSSCCMMLHMLNGC 288
Query: 564 LP 565
P
Sbjct: 289 HP 290
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 98/239 (41%), Gaps = 20/239 (8%)
Query: 353 SKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKA 412
S G +Y ++ GSG G+ V V + ++ + E I L
Sbjct: 8 SVKGRIYSILKQIGSG-GSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNK 66
Query: 413 FYYANDEKLLISDF-IRNGSLYAALHAGPSDSLPPL-------PWEARLKIAQGTARGLM 464
+D+ + + D+ I + +Y + G D L PWE R + +
Sbjct: 67 LQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWE-RKSYWKNMLEAVH 125
Query: 465 YIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGL-NRLLPGTSKVTKNETIVTSGTGSR 523
IH++ VH ++K L+ D + I FG+ N++ P T+ V K+ + GT +
Sbjct: 126 TIHQHG---IVHSDLKPANFLIVDGMLKLID-FGIANQMQPDTTSVVKDSQV---GTVNY 178
Query: 524 I--SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLV 580
+ AI ++ + E SK + K DV+S G +L + G+ P N L +++
Sbjct: 179 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII 237
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 98/239 (41%), Gaps = 20/239 (8%)
Query: 353 SKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKA 412
S G +Y ++ GSG G+ V V + ++ + E I L
Sbjct: 4 SVKGRIYSILKQIGSG-GSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNK 62
Query: 413 FYYANDEKLLISDF-IRNGSLYAALHAGPSDSLPPL-------PWEARLKIAQGTARGLM 464
+D+ + + D+ I + +Y + G D L PWE R + +
Sbjct: 63 LQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWE-RKSYWKNMLEAVH 121
Query: 465 YIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGL-NRLLPGTSKVTKNETIVTSGTGSR 523
IH++ VH ++K L+ D + I FG+ N++ P T+ V K+ + GT +
Sbjct: 122 TIHQHG---IVHSDLKPANFLIVDGMLKLID-FGIANQMQPDTTSVVKDSQV---GTVNY 174
Query: 524 I--SAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLV 580
+ AI ++ + E SK + K DV+S G +L + G+ P N L +++
Sbjct: 175 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII 233
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 91/239 (38%), Gaps = 32/239 (13%)
Query: 334 GFSLELEDLLRASAYVV----GKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRF 389
G L E+L S Y + GK ++ + V A ++ ++L+ D
Sbjct: 10 GVDLGTENLYFQSMYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARD----H 65
Query: 390 KDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPW 449
+ E E ++HPNIVRL LI D + G L+ + A S
Sbjct: 66 QKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADAS- 124
Query: 450 EARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPC---ISGFGLNRLLPGT 506
Q +++ H+ VH ++K +LL +L ++ FGL + G
Sbjct: 125 ----HCIQQILEAVLHCHQMG---VVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGE 177
Query: 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
+ +GT YL+PE + + + D+++ G++L +L G P
Sbjct: 178 QQAWFG----FAGTPG--------YLSPEV-LRKDPYGKPVDLWACGVILYILLVGYPP 223
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 98/249 (39%), Gaps = 38/249 (15%)
Query: 392 FESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEA 451
F SE + + HP+IV+L + +I + G L L +SL L
Sbjct: 60 FMSEAVIMKNLDHPHIVKLIGII-EEEPTWIIMELYPYGELGHYLERN-KNSLKVL---T 114
Query: 452 RLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTK 511
+ + + + Y+ + VH +I IL+ + FGL+R +
Sbjct: 115 LVLYSLQICKAMAYLESINC---VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYK- 170
Query: 512 NETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPE 570
+ ++ + +++PE+ I +FT DV+ F + + EIL+ G+ P E
Sbjct: 171 ----------ASVTRLPIKWMSPES-INFRRFTTASDVWMFAVCMWEILSFGKQPFFWLE 219
Query: 571 NDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMR 630
N K + ++ K +R P ++ P L + + C + DP RPR
Sbjct: 220 N--KDVIGVLEKG--DRLPKPDLCPPVL-------------YTLMTRCWDYDPSDRPRFT 262
Query: 631 TVSESLDRV 639
+ SL V
Sbjct: 263 ELVCSLSDV 271
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 51/122 (41%), Gaps = 18/122 (14%)
Query: 447 LPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506
+P + KIA + L ++H S +H ++K + +L++ + FG++ L
Sbjct: 150 IPEDILGKIAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL--- 204
Query: 507 SKVTKNETIVTSGTGSRISAISNVYLAPE---ARIYGSKFTQKCDVYSFGIVLLEILTGR 563
I A Y+APE + ++ K D++S GI ++E+ R
Sbjct: 205 ----------VDSVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILR 254
Query: 564 LP 565
P
Sbjct: 255 FP 256
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 98/249 (39%), Gaps = 38/249 (15%)
Query: 392 FESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEA 451
F SE + + HP+IV+L + +I + G L L +SL L
Sbjct: 56 FMSEAVIMKNLDHPHIVKLIGII-EEEPTWIIMELYPYGELGHYLERN-KNSLKVL---T 110
Query: 452 RLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTK 511
+ + + + Y+ + VH +I IL+ + FGL+R +
Sbjct: 111 LVLYSLQICKAMAYLESINC---VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYK- 166
Query: 512 NETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPE 570
+ ++ + +++PE+ I +FT DV+ F + + EIL+ G+ P E
Sbjct: 167 ----------ASVTRLPIKWMSPES-INFRRFTTASDVWMFAVCMWEILSFGKQPFFWLE 215
Query: 571 NDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMR 630
N K + ++ K +R P ++ P L + + C + DP RPR
Sbjct: 216 N--KDVIGVLEKG--DRLPKPDLCPPVL-------------YTLMTRCWDYDPSDRPRFT 258
Query: 631 TVSESLDRV 639
+ SL V
Sbjct: 259 ELVCSLSDV 267
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 73/180 (40%), Gaps = 18/180 (10%)
Query: 388 RFKDFESE-VEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPP 446
R + F +E + A A + P IV L + + + GSL +
Sbjct: 108 RLEVFRAEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGC----- 162
Query: 447 LPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILL-DDELHPCISGFGLNRLLPG 505
LP + L GL Y+H R+ +HG++K+ +LL D H + FG L
Sbjct: 163 LPEDRALYYLGQALEGLEYLHS---RRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQ- 218
Query: 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
+ K+ TG I + ++APE + G K DV+S ++L +L G P
Sbjct: 219 PDGLGKDLL-----TGDYIPG-TETHMAPEV-VLGRSCDAKVDVWSSCCMMLHMLNGCHP 271
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 98/249 (39%), Gaps = 38/249 (15%)
Query: 392 FESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEA 451
F SE + + HP+IV+L + +I + G L L +SL L
Sbjct: 72 FMSEAVIMKNLDHPHIVKLIGII-EEEPTWIIMELYPYGELGHYLERN-KNSLKVL---T 126
Query: 452 RLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTK 511
+ + + + Y+ + VH +I IL+ + FGL+R +
Sbjct: 127 LVLYSLQICKAMAYLESINC---VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYK- 182
Query: 512 NETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPE 570
+ ++ + +++PE+ I +FT DV+ F + + EIL+ G+ P E
Sbjct: 183 ----------ASVTRLPIKWMSPES-INFRRFTTASDVWMFAVCMWEILSFGKQPFFWLE 231
Query: 571 NDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMR 630
N K + ++ K +R P ++ P L + + C + DP RPR
Sbjct: 232 N--KDVIGVLEKG--DRLPKPDLCPPVL-------------YTLMTRCWDYDPSDRPRFT 274
Query: 631 TVSESLDRV 639
+ SL V
Sbjct: 275 ELVCSLSDV 283
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 10/87 (11%)
Query: 403 QHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPW--EARLK-IAQGT 459
QH ++VR + + +D L+ +++ GSL A+ S++ + + EA LK +
Sbjct: 69 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI----SENYRIMSYFKEAELKDLLLQV 124
Query: 460 ARGLMYIHEYSPRKYVHGNIKSTKILL 486
RGL YIH S VH +IK + I +
Sbjct: 125 GRGLRYIHSMS---LVHMDIKPSNIFI 148
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 10/87 (11%)
Query: 403 QHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPW--EARLK-IAQGT 459
QH ++VR + + +D L+ +++ GSL A+ S++ + + EA LK +
Sbjct: 67 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI----SENYRIMSYFKEAELKDLLLQV 122
Query: 460 ARGLMYIHEYSPRKYVHGNIKSTKILL 486
RGL YIH S VH +IK + I +
Sbjct: 123 GRGLRYIHSMS---LVHMDIKPSNIFI 146
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 10/87 (11%)
Query: 403 QHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPW--EARLK-IAQGT 459
QH ++VR + + +D L+ +++ GSL A+ S++ + + EA LK +
Sbjct: 67 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI----SENYRIMSYFKEAELKDLLLQV 122
Query: 460 ARGLMYIHEYSPRKYVHGNIKSTKILL 486
RGL YIH S VH +IK + I +
Sbjct: 123 GRGLRYIHSMS---LVHMDIKPSNIFI 146
>pdb|2LAV|A Chain A, Nmr Solution Structure Of Human Vaccinia-Related Kinase 1
Length = 361
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 17/108 (15%)
Query: 463 LMYIHEYSPRKYVHGNIKSTKILLD----DELHPCISGFGLNRLLPGTSKVTKNE-TIVT 517
L YIHE+ +YVHG+IK++ +LL+ D+++ G G K K +
Sbjct: 165 LEYIHEH---EYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKEYKEDPKRCH 221
Query: 518 SGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
GT S ++ +AP +++ D+ G +++ LTG LP
Sbjct: 222 DGTIEFTSIDAHNGVAP---------SRRGDLEILGYCMIQWLTGHLP 260
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 10/87 (11%)
Query: 403 QHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPW--EARLK-IAQGT 459
QH ++VR + + +D L+ +++ GSL A+ S++ + + EA LK +
Sbjct: 65 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI----SENYRIMSYFKEAELKDLLLQV 120
Query: 460 ARGLMYIHEYSPRKYVHGNIKSTKILL 486
RGL YIH S VH +IK + I +
Sbjct: 121 GRGLRYIHSMS---LVHMDIKPSNIFI 144
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 54/122 (44%), Gaps = 18/122 (14%)
Query: 447 LPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506
+P + KIA + L ++H S +H ++K + +L++ + FG++ L
Sbjct: 106 IPEDILGKIAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL--V 161
Query: 507 SKVTKNETIVTSGTGSRISAISNVYLAPE---ARIYGSKFTQKCDVYSFGIVLLEILTGR 563
V K+ I A Y+APE + ++ K D++S GI ++E+ R
Sbjct: 162 DDVAKD-----------IDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILR 210
Query: 564 LP 565
P
Sbjct: 211 FP 212
>pdb|2KTY|A Chain A, Solution Structure Of Human Vaccinia Related Kinase-1
pdb|2KUL|A Chain A, Solution Structure Of Human Vaccinia Related Kinase
1(Vrk1)
Length = 368
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 17/108 (15%)
Query: 463 LMYIHEYSPRKYVHGNIKSTKILLD----DELHPCISGFGLNRLLPGTSKVTKNE-TIVT 517
L YIHE+ +YVHG+IK++ +LL+ D+++ G G K K +
Sbjct: 165 LEYIHEH---EYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKEYKEDPKRCH 221
Query: 518 SGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
GT S ++ +AP +++ D+ G +++ LTG LP
Sbjct: 222 DGTIEFTSIDAHNGVAP---------SRRGDLEILGYCMIQWLTGHLP 260
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 18/90 (20%)
Query: 475 VHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRIS--AISNVYL 532
+H ++K + I++ + I FGL R T+GT ++ ++ Y
Sbjct: 148 IHRDLKPSNIVVKSDATLKILDFGLAR---------------TAGTSFMMTPYVVTRYYR 192
Query: 533 APEARIYGSKFTQKCDVYSFGIVLLEILTG 562
APE I G + + D++S G+++ E++ G
Sbjct: 193 APEV-ILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 18/90 (20%)
Query: 475 VHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRIS--AISNVYL 532
+H ++K + I++ + I FGL R T+GT ++ ++ Y
Sbjct: 148 IHRDLKPSNIVVKSDATLKILDFGLAR---------------TAGTSFMMTPYVVTRYYR 192
Query: 533 APEARIYGSKFTQKCDVYSFGIVLLEILTG 562
APE I G + + D++S G+++ E++ G
Sbjct: 193 APEV-ILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 95/232 (40%), Gaps = 36/232 (15%)
Query: 353 SKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKA 412
S G +Y ++ GSG G+ V V + ++ + E I L
Sbjct: 52 SVKGRIYSILKQIGSG-GSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNK 110
Query: 413 FYYANDEKLLISDF-IRNGSLYAALHAGPSDSLPPL-------PWEARLKIAQGTARGLM 464
+D+ + + D+ I + +Y + G D L PWE R + +
Sbjct: 111 LQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWE-RKSYWKNMLEAVH 169
Query: 465 YIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGL-NRLLPGTSKVTKNETIVTSGTGSR 523
IH++ VH ++K L+ D + I FG+ N++ P T+ V K+ S+
Sbjct: 170 TIHQHG---IVHSDLKPANFLIVDGMLKLID-FGIANQMQPDTTSVVKD---------SQ 216
Query: 524 ISAISNVYLAPEA-------RIYG---SKFTQKCDVYSFGIVLLEILTGRLP 565
+ A++ Y+ PEA R G SK + K DV+S G +L + G+ P
Sbjct: 217 VGAVN--YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 266
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 93/237 (39%), Gaps = 41/237 (17%)
Query: 404 HPNIVRLKAFYYANDEK--------LLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKI 455
HPNIV+ + E+ LL+++ + G L L +S PL + LKI
Sbjct: 85 HPNIVQFCSAASIGKEESDTGQAEFLLLTELCK-GQLVEFLKK--MESRGPLSCDTVLKI 141
Query: 456 AQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLL---PGTSKVTKN 512
T R + ++H P +H ++K +LL ++ + FG + P S +
Sbjct: 142 FYQTCRAVQHMHRQKP-PIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQR 200
Query: 513 ETIVTSGTGSRISAISNVYLAPEARIYGSKF--TQKCDVYSFGIVL-------------- 556
+V + + Y PE S F +K D+++ G +L
Sbjct: 201 RALVEEEITRNTTPM---YRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGA 257
Query: 557 -LEILTGRLPDAGPENDGKGLESLVRKAFR----ERRPLSEVIDPALVKEIHAKRQV 608
L I+ G+ + SL+R + ER ++EV+ ++EI A R V
Sbjct: 258 KLRIVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQ--LQEIAAARNV 312
>pdb|3OP5|A Chain A, Human Vaccinia-Related Kinase 1
pdb|3OP5|B Chain B, Human Vaccinia-Related Kinase 1
pdb|3OP5|C Chain C, Human Vaccinia-Related Kinase 1
pdb|3OP5|D Chain D, Human Vaccinia-Related Kinase 1
Length = 364
Score = 32.7 bits (73), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 17/108 (15%)
Query: 463 LMYIHEYSPRKYVHGNIKSTKILLD----DELHPCISGFGLNRLLPGTSKV-TKNETIVT 517
L YIHE+ +YVHG+IK++ +LL+ D+++ G G K +
Sbjct: 165 LEYIHEH---EYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCH 221
Query: 518 SGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
GT S ++ +AP +++ D+ G +++ LTG LP
Sbjct: 222 DGTIEFTSIDAHNGVAP---------SRRGDLEILGYCMIQWLTGHLP 260
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 32.7 bits (73), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 63/171 (36%), Gaps = 26/171 (15%)
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLK 454
E+ + HPNI+ L+ + +E + LY +D L + + R+
Sbjct: 79 EIRLLNHFHHPNILGLRDIFVHFEEPAM-------HKLYLVTELMRTD-LAQVIHDQRIV 130
Query: 455 IAQGTARGLMY-----IHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKV 509
I+ + MY +H VH ++ ILL D I F L R T+
Sbjct: 131 ISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR--EDTADA 188
Query: 510 TKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEIL 560
K + Y APE + FT+ D++S G V+ E+
Sbjct: 189 NKTHYVTHRW-----------YRAPELVMQFKGFTKLVDMWSAGCVMAEMF 228
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 32.7 bits (73), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 63/171 (36%), Gaps = 26/171 (15%)
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLK 454
E+ + HPNI+ L+ + +E + LY +D L + + R+
Sbjct: 79 EIRLLNHFHHPNILGLRDIFVHFEEPAM-------HKLYLVTELMRTD-LAQVIHDQRIV 130
Query: 455 IAQGTARGLMY-----IHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKV 509
I+ + MY +H VH ++ ILL D I F L R T+
Sbjct: 131 ISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR--EDTADA 188
Query: 510 TKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEIL 560
K + Y APE + FT+ D++S G V+ E+
Sbjct: 189 NKTHYVTHRW-----------YRAPELVMQFKGFTKLVDMWSAGCVMAEMF 228
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 32.7 bits (73), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 68/174 (39%), Gaps = 21/174 (12%)
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLK 454
E+ A A + P IV L + + + GSL + + LP + L
Sbjct: 100 ELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI-----KQMGCLPEDRALY 154
Query: 455 IAQGTARGLMYIHEYSPRKYVHGNIKSTKILL-DDELHPCISGFGLNRLLP--GTSKVTK 511
GL Y+H R+ +HG++K+ +LL D + FG L G K
Sbjct: 155 YLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLL 211
Query: 512 NETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
TG I + ++APE + G K D++S ++L +L G P
Sbjct: 212 --------TGDYIPG-TETHMAPEV-VMGKPCDAKVDIWSSCCMMLHMLNGCHP 255
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 32.3 bits (72), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 68/174 (39%), Gaps = 21/174 (12%)
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLK 454
E+ A A + P IV L + + + GSL + + LP + L
Sbjct: 114 ELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI-----KQMGCLPEDRALY 168
Query: 455 IAQGTARGLMYIHEYSPRKYVHGNIKSTKILL-DDELHPCISGFGLNRLLP--GTSKVTK 511
GL Y+H R+ +HG++K+ +LL D + FG L G K
Sbjct: 169 YLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLL 225
Query: 512 NETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
TG I + ++APE + G K D++S ++L +L G P
Sbjct: 226 --------TGDYIPG-TETHMAPEV-VMGKPCDAKVDIWSSCCMMLHMLNGCHP 269
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 32.3 bits (72), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 48/118 (40%), Gaps = 8/118 (6%)
Query: 460 ARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSG 519
A +M I YVH +IK ILLD H ++ FG L V ++V G
Sbjct: 169 AEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTV---RSLVAVG 225
Query: 520 TGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP---DAGPENDGK 574
T +S + A + +CD ++ G+ E+ G+ P D+ E GK
Sbjct: 226 TPDYLS--PEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGK 281
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 32.3 bits (72), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 98/242 (40%), Gaps = 29/242 (11%)
Query: 336 SLELEDLLRASAY----VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTE--GDATWRF 389
S+ +D+L Y V+GK ++ + + A +V V + T G +T
Sbjct: 16 SMADDDVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLST--- 72
Query: 390 KDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPW 449
+D + E ++HP+IV L Y ++ ++ +F+ L + +D+
Sbjct: 73 EDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEI-VKRADAGFVYSE 131
Query: 450 EARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPC---ISGFGLNRLLPGT 506
+ L Y H+ +H ++K +LL + + + GFG+ L +
Sbjct: 132 AVASHYMRQILEALRYCHD---NNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGES 188
Query: 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPD 566
V G R+ + ++APE + + + DV+ G++L +L+G LP
Sbjct: 189 GLVA----------GGRVG--TPHFMAPEV-VKREPYGKPVDVWGCGVILFILLSGCLPF 235
Query: 567 AG 568
G
Sbjct: 236 YG 237
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 32.3 bits (72), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 69/174 (39%), Gaps = 21/174 (12%)
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLK 454
E+ A A + P IV L + + + GSL + + LP + L
Sbjct: 116 ELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI-----KQMGCLPEDRALY 170
Query: 455 IAQGTARGLMYIHEYSPRKYVHGNIKSTKILL-DDELHPCISGFGLNRLLP--GTSKVTK 511
GL Y+H R+ +HG++K+ +LL D + FG L G K
Sbjct: 171 YLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGK--- 224
Query: 512 NETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
+ TG I + ++APE + G K D++S ++L +L G P
Sbjct: 225 -----SLLTGDYIPG-TETHMAPEV-VMGKPCDAKVDIWSSCCMMLHMLNGCHP 271
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 32.3 bits (72), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 36/192 (18%), Positives = 79/192 (41%), Gaps = 26/192 (13%)
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLK 454
E+ + ++H NIVRL +++ + L+ +F + L + D P + +
Sbjct: 51 EICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC-DQDLKKYFDSCNGDLDPEIVKSFLFQ 109
Query: 455 IAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNET 514
+ +GL + H R +H ++K +L++ ++ FGL R + E
Sbjct: 110 L----LKGLGFCHS---RNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEV 162
Query: 515 IVTSGTGSRISAISNVYLAPEARIYGSK-FTQKCDVYSFGIVLLEILTGRLPDAGPENDG 573
+ ++ P ++G+K ++ D++S G + E+ A P G
Sbjct: 163 V-------------TLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANA----ARPLFPG 205
Query: 574 KGLESLVRKAFR 585
++ +++ FR
Sbjct: 206 NDVDDQLKRIFR 217
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 32.0 bits (71), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 96/238 (40%), Gaps = 29/238 (12%)
Query: 340 EDLLRASAY----VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTE--GDATWRFKDFE 393
+D+L Y V+GK ++ + + A +V V + T G +T +D +
Sbjct: 18 DDVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLST---EDLK 74
Query: 394 SEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARL 453
E ++HP+IV L Y ++ ++ +F+ L + +D+
Sbjct: 75 REASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEI-VKRADAGFVYSEAVAS 133
Query: 454 KIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPC---ISGFGLNRLLPGTSKVT 510
+ L Y H+ +H ++K +LL + + + GFG+ L + V
Sbjct: 134 HYMRQILEALRYCHD---NNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVA 190
Query: 511 KNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAG 568
G R+ + ++APE + + + DV+ G++L +L+G LP G
Sbjct: 191 ----------GGRVG--TPHFMAPEV-VKREPYGKPVDVWGCGVILFILLSGCLPFYG 235
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 94/225 (41%), Gaps = 31/225 (13%)
Query: 354 KNGIM--YKV---VVGRGSGMGAPTVVAVRRLTEGDATWRFKDF---ESEVEAIARV-QH 404
KN I+ YKV V+G G G + +R E A +D EVE R Q
Sbjct: 16 KNAIIDDYKVTSQVLGLGIN-GKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC 74
Query: 405 PNIVRLKAFY---YANDEKLLI-SDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTA 460
P+IVR+ Y YA + LLI + + G L++ + + EA +I +
Sbjct: 75 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTER--EAS-EIMKSIG 131
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
+ Y+H + H ++K +L + P N +L T ET TS
Sbjct: 132 EAIQYLHSIN---IAHRDVKPENLLYTSK-RP-------NAILKLTDFGFAKET--TSHN 178
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
+ Y+APE + K+ + CD++S G+++ +L G P
Sbjct: 179 SLTTPCYTPYYVAPEV-LGPEKYDKSCDMWSLGVIMYILLCGYPP 222
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 94/225 (41%), Gaps = 31/225 (13%)
Query: 354 KNGIM--YKV---VVGRGSGMGAPTVVAVRRLTEGDATWRFKDF---ESEVEAIARV-QH 404
KN I+ YKV V+G G G + +R E A +D EVE R Q
Sbjct: 17 KNAIIDDYKVTSQVLGLGIN-GKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC 75
Query: 405 PNIVRLKAFY---YANDEKLLI-SDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTA 460
P+IVR+ Y YA + LLI + + G L++ + + EA +I +
Sbjct: 76 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTER--EAS-EIMKSIG 132
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
+ Y+H + H ++K +L + P N +L T ET TS
Sbjct: 133 EAIQYLHSIN---IAHRDVKPENLLYTSK-RP-------NAILKLTDFGFAKET--TSHN 179
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
+ Y+APE + K+ + CD++S G+++ +L G P
Sbjct: 180 SLTTPCYTPYYVAPEV-LGPEKYDKSCDMWSLGVIMYILLCGYPP 223
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 94/225 (41%), Gaps = 31/225 (13%)
Query: 354 KNGIM--YKV---VVGRGSGMGAPTVVAVRRLTEGDATWRFKDF---ESEVEAIARV-QH 404
KN I+ YKV V+G G G + +R E A +D EVE R Q
Sbjct: 18 KNAIIDDYKVTSQVLGLGIN-GKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC 76
Query: 405 PNIVRLKAFY---YANDEKLLI-SDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTA 460
P+IVR+ Y YA + LLI + + G L++ + + EA +I +
Sbjct: 77 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTER--EAS-EIMKSIG 133
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
+ Y+H + H ++K +L + P N +L T ET TS
Sbjct: 134 EAIQYLHSIN---IAHRDVKPENLLYTSK-RP-------NAILKLTDFGFAKET--TSHN 180
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
+ Y+APE + K+ + CD++S G+++ +L G P
Sbjct: 181 SLTTPCYTPYYVAPEV-LGPEKYDKSCDMWSLGVIMYILLCGYPP 224
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 88/219 (40%), Gaps = 28/219 (12%)
Query: 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409
+GK ++ + V + A ++ ++L+ D + E E ++HPNIVR
Sbjct: 39 LGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARD----HQKLEREARICRLLKHPNIVR 94
Query: 410 LKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEY 469
L L+ D + G L+ + A S +A I Q + +IH++
Sbjct: 95 LHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEA----DASHCIHQ-ILESVNHIHQH 149
Query: 470 SPRKYVHGNIKSTKILLDDELHPC---ISGFGLNRLLPGTSKVTKNETIVTSGTGSRISA 526
VH ++K +LL + ++ FGL + G + +GT
Sbjct: 150 D---IVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQA----WFGFAGTPG---- 198
Query: 527 ISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
YL+PE + + + D+++ G++L +L G P
Sbjct: 199 ----YLSPEV-LRKDPYGKPVDIWACGVILYILLVGYPP 232
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/193 (19%), Positives = 81/193 (41%), Gaps = 28/193 (14%)
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLK 454
E+ + ++H NIVRL +++ + L+ +F + L + D P + +
Sbjct: 51 EICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC-DQDLKKYFDSCNGDLDPEIVKSFLFQ 109
Query: 455 IAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNET 514
+ +GL + H R +H ++K +L++ ++ FGL R + E
Sbjct: 110 L----LKGLGFCHS---RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEV 162
Query: 515 IVTSGTGSRISAISNVYLAPEARIYGSK-FTQKCDVYSFGIVLLEILTGRLPDAG-PEND 572
+ ++ P ++G+K ++ D++S G + E L +AG P
Sbjct: 163 VT-------------LWYRPPDVLFGAKLYSTSIDMWSAGCIFAE-----LANAGRPLFP 204
Query: 573 GKGLESLVRKAFR 585
G ++ +++ FR
Sbjct: 205 GNDVDDQLKRIFR 217
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 94/225 (41%), Gaps = 31/225 (13%)
Query: 354 KNGIM--YKV---VVGRGSGMGAPTVVAVRRLTEGDATWRFKDF---ESEVEAIARV-QH 404
KN I+ YKV V+G G G + +R E A +D EVE R Q
Sbjct: 11 KNAIIDDYKVTSQVLGLGIN-GKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC 69
Query: 405 PNIVRLKAFY---YANDEKLLI-SDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTA 460
P+IVR+ Y YA + LLI + + G L++ + + EA +I +
Sbjct: 70 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTER--EAS-EIMKSIG 126
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
+ Y+H + H ++K +L + P N +L T ET TS
Sbjct: 127 EAIQYLHSIN---IAHRDVKPENLLYTSK-RP-------NAILKLTDFGFAKET--TSHN 173
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
+ Y+APE + K+ + CD++S G+++ +L G P
Sbjct: 174 SLTTPCYTPYYVAPEV-LGPEKYDKSCDMWSLGVIMYILLCGYPP 217
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 94/225 (41%), Gaps = 31/225 (13%)
Query: 354 KNGIM--YKV---VVGRGSGMGAPTVVAVRRLTEGDATWRFKDF---ESEVEAIARV-QH 404
KN I+ YKV V+G G G + +R E A +D EVE R Q
Sbjct: 10 KNAIIDDYKVTSQVLGLGIN-GKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC 68
Query: 405 PNIVRLKAFY---YANDEKLLI-SDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTA 460
P+IVR+ Y YA + LLI + + G L++ + + EA +I +
Sbjct: 69 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTER--EAS-EIMKSIG 125
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
+ Y+H + H ++K +L + P N +L T ET TS
Sbjct: 126 EAIQYLHSIN---IAHRDVKPENLLYTSK-RP-------NAILKLTDFGFAKET--TSHN 172
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
+ Y+APE + K+ + CD++S G+++ +L G P
Sbjct: 173 SLTTPCYTPYYVAPEV-LGPEKYDKSCDMWSLGVIMYILLCGYPP 216
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 94/225 (41%), Gaps = 31/225 (13%)
Query: 354 KNGIM--YKV---VVGRGSGMGAPTVVAVRRLTEGDATWRFKDF---ESEVEAIARV-QH 404
KN I+ YKV V+G G G + +R E A +D EVE R Q
Sbjct: 62 KNAIIDDYKVTSQVLGLGIN-GKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC 120
Query: 405 PNIVRLKAFY---YANDEKLLI-SDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTA 460
P+IVR+ Y YA + LLI + + G L++ + + EA +I +
Sbjct: 121 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTER--EAS-EIMKSIG 177
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
+ Y+H + H ++K +L + P N +L T ET TS
Sbjct: 178 EAIQYLHSIN---IAHRDVKPENLLYTSK-RP-------NAILKLTDFGFAKET--TSHN 224
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
+ Y+APE + K+ + CD++S G+++ +L G P
Sbjct: 225 SLTTPCYTPYYVAPEV-LGPEKYDKSCDMWSLGVIMYILLCGYPP 268
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 49/117 (41%), Gaps = 26/117 (22%)
Query: 475 VHGNIKSTKILLDDELHPCISGFGLNR----LLPGTSKVTKNETIVTSGTGSRISAISNV 530
+H +IK IL+D LNR L+ S +T+ T G+R V
Sbjct: 132 LHRDIKDENILID-----------LNRGELKLIDFGSGALLKDTVYTDFDGTR------V 174
Query: 531 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRER 587
Y PE Y + V+S GI+L +++ G +P E +G + FR+R
Sbjct: 175 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRG-----QVFFRQR 226
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 94/225 (41%), Gaps = 31/225 (13%)
Query: 354 KNGIM--YKV---VVGRGSGMGAPTVVAVRRLTEGDATWRFKDF---ESEVEAIARV-QH 404
KN I+ YKV V+G G G + +R E A +D EVE R Q
Sbjct: 12 KNAIIDDYKVTSQVLGLGIN-GKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC 70
Query: 405 PNIVRLKAFY---YANDEKLLI-SDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTA 460
P+IVR+ Y YA + LLI + + G L++ + + EA +I +
Sbjct: 71 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTER--EAS-EIMKSIG 127
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
+ Y+H + H ++K +L + P N +L T ET TS
Sbjct: 128 EAIQYLHSIN---IAHRDVKPENLLYTSK-RP-------NAILKLTDFGFAKET--TSHN 174
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
+ Y+APE + K+ + CD++S G+++ +L G P
Sbjct: 175 SLTTPCYTPYYVAPEV-LGPEKYDKSCDMWSLGVIMYILLCGYPP 218
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 18/113 (15%)
Query: 475 VHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAP 534
+H +IK IL+D G +L+ S +T+ T G+R VY P
Sbjct: 179 LHRDIKDENILID-------LNRGELKLIDFGSGALLKDTVYTDFDGTR------VYSPP 225
Query: 535 EARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRER 587
E Y + V+S GI+L +++ G +P E +G + FR+R
Sbjct: 226 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRG-----QVFFRQR 273
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 94/225 (41%), Gaps = 31/225 (13%)
Query: 354 KNGIM--YKV---VVGRGSGMGAPTVVAVRRLTEGDATWRFKDF---ESEVEAIARV-QH 404
KN I+ YKV V+G G G + +R E A +D EVE R Q
Sbjct: 26 KNAIIDDYKVTSQVLGLGIN-GKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC 84
Query: 405 PNIVRLKAFY---YANDEKLLI-SDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTA 460
P+IVR+ Y YA + LLI + + G L++ + + EA +I +
Sbjct: 85 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTER--EAS-EIMKSIG 141
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
+ Y+H + H ++K +L + P N +L T ET TS
Sbjct: 142 EAIQYLHSIN---IAHRDVKPENLLYTSK-RP-------NAILKLTDFGFAKET--TSHN 188
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
+ Y+APE + K+ + CD++S G+++ +L G P
Sbjct: 189 SLTTPCYTPYYVAPEV-LGPEKYDKSCDMWSLGVIMYILLCGYPP 232
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 49/117 (41%), Gaps = 26/117 (22%)
Query: 475 VHGNIKSTKILLDDELHPCISGFGLNR----LLPGTSKVTKNETIVTSGTGSRISAISNV 530
+H +IK IL+D LNR L+ S +T+ T G+R V
Sbjct: 132 LHRDIKDENILID-----------LNRGELKLIDFGSGALLKDTVYTDFDGTR------V 174
Query: 531 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRER 587
Y PE Y + V+S GI+L +++ G +P E +G + FR+R
Sbjct: 175 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRG-----QVFFRQR 226
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 49/117 (41%), Gaps = 26/117 (22%)
Query: 475 VHGNIKSTKILLDDELHPCISGFGLNR----LLPGTSKVTKNETIVTSGTGSRISAISNV 530
+H +IK IL+D LNR L+ S +T+ T G+R V
Sbjct: 135 LHRDIKDENILID-----------LNRGELKLIDFGSGALLKDTVYTDFDGTR------V 177
Query: 531 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRER 587
Y PE Y + V+S GI+L +++ G +P E +G + FR+R
Sbjct: 178 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRG-----QVFFRQR 229
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 73/187 (39%), Gaps = 31/187 (16%)
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSD-----SLPPLPW 449
E+ + R+ H ++V++ ++ D + LY L SD P
Sbjct: 102 EIAILNRLNHDHVVKVLDI-------VIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLT 154
Query: 450 EARLK-IAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLP---- 504
E +K + G+ Y+H +H ++K L++ + + FGL R +
Sbjct: 155 ELHIKTLLYNLLVGVKYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPEN 211
Query: 505 GTSKV-----TKNETIVTSGTGSRIS------AISNVYLAPEARIYGSKFTQKCDVYSFG 553
G S++ + +VT + ++ Y APE + +T+ DV+S G
Sbjct: 212 GNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIG 271
Query: 554 IVLLEIL 560
+ E+L
Sbjct: 272 CIFAELL 278
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 21/95 (22%)
Query: 475 VHGNIKSTKILLDDELHPCISGFGLNR----LLPGTSKVTKNETIVTSGTGSRISAISNV 530
+H +IK IL+D LNR L+ S +T+ T G+R V
Sbjct: 136 LHRDIKDENILID-----------LNRGELKLIDFGSGALLKDTVYTDFDGTR------V 178
Query: 531 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
Y PE Y + V+S GI+L +++ G +P
Sbjct: 179 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 213
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 21/95 (22%)
Query: 475 VHGNIKSTKILLDDELHPCISGFGLNR----LLPGTSKVTKNETIVTSGTGSRISAISNV 530
+H +IK IL+D LNR L+ S +T+ T G+R V
Sbjct: 151 LHRDIKDENILID-----------LNRGELKLIDFGSGALLKDTVYTDFDGTR------V 193
Query: 531 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
Y PE Y + V+S GI+L +++ G +P
Sbjct: 194 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 228
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 21/95 (22%)
Query: 475 VHGNIKSTKILLDDELHPCISGFGLNR----LLPGTSKVTKNETIVTSGTGSRISAISNV 530
+H +IK IL+D LNR L+ S +T+ T G+R V
Sbjct: 152 LHRDIKDENILID-----------LNRGELKLIDFGSGALLKDTVYTDFDGTR------V 194
Query: 531 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
Y PE Y + V+S GI+L +++ G +P
Sbjct: 195 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 229
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 21/95 (22%)
Query: 475 VHGNIKSTKILLDDELHPCISGFGLNR----LLPGTSKVTKNETIVTSGTGSRISAISNV 530
+H +IK IL+D LNR L+ S +T+ T G+R V
Sbjct: 152 LHRDIKDENILID-----------LNRGELKLIDFGSGALLKDTVYTDFDGTR------V 194
Query: 531 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
Y PE Y + V+S GI+L +++ G +P
Sbjct: 195 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 229
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 21/95 (22%)
Query: 475 VHGNIKSTKILLDDELHPCISGFGLNR----LLPGTSKVTKNETIVTSGTGSRISAISNV 530
+H +IK IL+D LNR L+ S +T+ T G+R V
Sbjct: 151 LHRDIKDENILID-----------LNRGELKLIDFGSGALLKDTVYTDFDGTR------V 193
Query: 531 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
Y PE Y + V+S GI+L +++ G +P
Sbjct: 194 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 228
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 49/117 (41%), Gaps = 26/117 (22%)
Query: 475 VHGNIKSTKILLDDELHPCISGFGLNR----LLPGTSKVTKNETIVTSGTGSRISAISNV 530
+H +IK IL+D LNR L+ S +T+ T G+R V
Sbjct: 137 LHRDIKDENILID-----------LNRGELKLIDFGSGALLKDTVYTDFDGTR------V 179
Query: 531 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRER 587
Y PE Y + V+S GI+L +++ G +P E +G + FR+R
Sbjct: 180 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRG-----QVFFRQR 231
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 21/95 (22%)
Query: 475 VHGNIKSTKILLDDELHPCISGFGLNR----LLPGTSKVTKNETIVTSGTGSRISAISNV 530
+H +IK IL+D LNR L+ S +T+ T G+R V
Sbjct: 152 LHRDIKDENILID-----------LNRGELKLIDFGSGALLKDTVYTDFDGTR------V 194
Query: 531 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
Y PE Y + V+S GI+L +++ G +P
Sbjct: 195 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 229
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 21/95 (22%)
Query: 475 VHGNIKSTKILLDDELHPCISGFGLNR----LLPGTSKVTKNETIVTSGTGSRISAISNV 530
+H +IK IL+D LNR L+ S +T+ T G+R V
Sbjct: 137 LHRDIKDENILID-----------LNRGELKLIDFGSGALLKDTVYTDFDGTR------V 179
Query: 531 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
Y PE Y + V+S GI+L +++ G +P
Sbjct: 180 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 214
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 94/225 (41%), Gaps = 31/225 (13%)
Query: 354 KNGIM--YKV---VVGRGSGMGAPTVVAVRRLTEGDATWRFKDF---ESEVEAIARV-QH 404
KN I+ YKV V+G G G + +R E A +D EVE R Q
Sbjct: 56 KNAIIDDYKVTSQVLGLGIN-GKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC 114
Query: 405 PNIVRLKAFY---YANDEKLLI-SDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTA 460
P+IVR+ Y YA + LLI + + G L++ + + EA +I +
Sbjct: 115 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTER--EAS-EIMKSIG 171
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
+ Y+H + H ++K +L + P N +L T ET TS
Sbjct: 172 EAIQYLHSIN---IAHRDVKPENLLYTSK-RP-------NAILKLTDFGFAKET--TSHN 218
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
+ Y+APE + K+ + CD++S G+++ +L G P
Sbjct: 219 SLTTPCYTPYYVAPEV-LGPEKYDKSCDMWSLGVIMYILLCGYPP 262
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 21/95 (22%)
Query: 475 VHGNIKSTKILLDDELHPCISGFGLNR----LLPGTSKVTKNETIVTSGTGSRISAISNV 530
+H +IK IL+D LNR L+ S +T+ T G+R V
Sbjct: 132 LHRDIKDENILID-----------LNRGELKLIDFGSGALLKDTVYTDFDGTR------V 174
Query: 531 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
Y PE Y + V+S GI+L +++ G +P
Sbjct: 175 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 209
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 21/95 (22%)
Query: 475 VHGNIKSTKILLDDELHPCISGFGLNR----LLPGTSKVTKNETIVTSGTGSRISAISNV 530
+H +IK IL+D LNR L+ S +T+ T G+R V
Sbjct: 159 LHRDIKDENILID-----------LNRGELKLIDFGSGALLKDTVYTDFDGTR------V 201
Query: 531 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
Y PE Y + V+S GI+L +++ G +P
Sbjct: 202 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 236
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 94/225 (41%), Gaps = 31/225 (13%)
Query: 354 KNGIM--YKV---VVGRGSGMGAPTVVAVRRLTEGDATWRFKDF---ESEVEAIARV-QH 404
KN I+ YKV V+G G G + +R E A +D EVE R Q
Sbjct: 12 KNAIIDDYKVTSQVLGLGIN-GKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC 70
Query: 405 PNIVRLKAFY---YANDEKLLI-SDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTA 460
P+IVR+ Y YA + LLI + + G L++ + + EA +I +
Sbjct: 71 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTER--EAS-EIMKSIG 127
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
+ Y+H + H ++K +L + P N +L T ET TS
Sbjct: 128 EAIQYLHSIN---IAHRDVKPENLLYTSK-RP-------NAILKLTDFGFAKET--TSHN 174
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
+ Y+APE + K+ + CD++S G+++ +L G P
Sbjct: 175 SLTTPCYTPYYVAPEV-LGPEKYDKSCDMWSLGVIMYILLCGYPP 218
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 21/95 (22%)
Query: 475 VHGNIKSTKILLDDELHPCISGFGLNR----LLPGTSKVTKNETIVTSGTGSRISAISNV 530
+H +IK IL+D LNR L+ S +T+ T G+R V
Sbjct: 137 LHRDIKDENILID-----------LNRGELKLIDFGSGALLKDTVYTDFDGTR------V 179
Query: 531 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
Y PE Y + V+S GI+L +++ G +P
Sbjct: 180 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 214
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 21/95 (22%)
Query: 475 VHGNIKSTKILLDDELHPCISGFGLNR----LLPGTSKVTKNETIVTSGTGSRISAISNV 530
+H +IK IL+D LNR L+ S +T+ T G+R V
Sbjct: 171 LHRDIKDENILID-----------LNRGELKLIDFGSGALLKDTVYTDFDGTR------V 213
Query: 531 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
Y PE Y + V+S GI+L +++ G +P
Sbjct: 214 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 248
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 49/117 (41%), Gaps = 26/117 (22%)
Query: 475 VHGNIKSTKILLDDELHPCISGFGLNR----LLPGTSKVTKNETIVTSGTGSRISAISNV 530
+H +IK IL+D LNR L+ S +T+ T G+R V
Sbjct: 164 LHRDIKDENILID-----------LNRGELKLIDFGSGALLKDTVYTDFDGTR------V 206
Query: 531 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRER 587
Y PE Y + V+S GI+L +++ G +P E +G + FR+R
Sbjct: 207 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRG-----QVFFRQR 258
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 21/95 (22%)
Query: 475 VHGNIKSTKILLDDELHPCISGFGLNR----LLPGTSKVTKNETIVTSGTGSRISAISNV 530
+H +IK IL+D LNR L+ S +T+ T G+R V
Sbjct: 179 LHRDIKDENILID-----------LNRGELKLIDFGSGALLKDTVYTDFDGTR------V 221
Query: 531 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
Y PE Y + V+S GI+L +++ G +P
Sbjct: 222 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 256
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 49/117 (41%), Gaps = 26/117 (22%)
Query: 475 VHGNIKSTKILLDDELHPCISGFGLNR----LLPGTSKVTKNETIVTSGTGSRISAISNV 530
+H +IK IL+D LNR L+ S +T+ T G+R V
Sbjct: 136 LHRDIKDENILID-----------LNRGELKLIDFGSGALLKDTVYTDFDGTR------V 178
Query: 531 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRER 587
Y PE Y + V+S GI+L +++ G +P E +G + FR+R
Sbjct: 179 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRG-----QVFFRQR 230
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 49/117 (41%), Gaps = 26/117 (22%)
Query: 475 VHGNIKSTKILLDDELHPCISGFGLNR----LLPGTSKVTKNETIVTSGTGSRISAISNV 530
+H +IK IL+D LNR L+ S +T+ T G+R V
Sbjct: 179 LHRDIKDENILID-----------LNRGELKLIDFGSGALLKDTVYTDFDGTR------V 221
Query: 531 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRER 587
Y PE Y + V+S GI+L +++ G +P E +G + FR+R
Sbjct: 222 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRG-----QVFFRQR 273
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 39/95 (41%), Gaps = 12/95 (12%)
Query: 476 HGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPE 535
H ++K IL+ + + FG+ + T +E + G + + +Y
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGI-------ASATTDEKLTQLG-----NTVGTLYYXAP 204
Query: 536 ARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPE 570
R S T + D+Y+ VL E LTG P G +
Sbjct: 205 ERFSESHATYRADIYALTCVLYECLTGSPPYQGDQ 239
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 21/95 (22%)
Query: 475 VHGNIKSTKILLDDELHPCISGFGLNR----LLPGTSKVTKNETIVTSGTGSRISAISNV 530
+H +IK IL+D LNR L+ S +T+ T G+R V
Sbjct: 164 LHRDIKDENILID-----------LNRGELKLIDFGSGALLKDTVYTDFDGTR------V 206
Query: 531 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
Y PE Y + V+S GI+L +++ G +P
Sbjct: 207 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 21/95 (22%)
Query: 475 VHGNIKSTKILLDDELHPCISGFGLNR----LLPGTSKVTKNETIVTSGTGSRISAISNV 530
+H +IK IL+D LNR L+ S +T+ T G+R V
Sbjct: 165 LHRDIKDENILID-----------LNRGELKLIDFGSGALLKDTVYTDFDGTR------V 207
Query: 531 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
Y PE Y + V+S GI+L +++ G +P
Sbjct: 208 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 21/95 (22%)
Query: 475 VHGNIKSTKILLDDELHPCISGFGLNR----LLPGTSKVTKNETIVTSGTGSRISAISNV 530
+H +IK IL+D LNR L+ S +T+ T G+R V
Sbjct: 165 LHRDIKDENILID-----------LNRGELKLIDFGSGALLKDTVYTDFDGTR------V 207
Query: 531 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
Y PE Y + V+S GI+L +++ G +P
Sbjct: 208 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 21/95 (22%)
Query: 475 VHGNIKSTKILLDDELHPCISGFGLNR----LLPGTSKVTKNETIVTSGTGSRISAISNV 530
+H +IK IL+D LNR L+ S +T+ T G+R V
Sbjct: 165 LHRDIKDENILID-----------LNRGELKLIDFGSGALLKDTVYTDFDGTR------V 207
Query: 531 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
Y PE Y + V+S GI+L +++ G +P
Sbjct: 208 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 21/95 (22%)
Query: 475 VHGNIKSTKILLDDELHPCISGFGLNR----LLPGTSKVTKNETIVTSGTGSRISAISNV 530
+H +IK IL+D LNR L+ S +T+ T G+R V
Sbjct: 164 LHRDIKDENILID-----------LNRGELKLIDFGSGALLKDTVYTDFDGTR------V 206
Query: 531 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
Y PE Y + V+S GI+L +++ G +P
Sbjct: 207 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 21/95 (22%)
Query: 475 VHGNIKSTKILLDDELHPCISGFGLNR----LLPGTSKVTKNETIVTSGTGSRISAISNV 530
+H +IK IL+D LNR L+ S +T+ T G+R V
Sbjct: 184 LHRDIKDENILID-----------LNRGELKLIDFGSGALLKDTVYTDFDGTR------V 226
Query: 531 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
Y PE Y + V+S GI+L +++ G +P
Sbjct: 227 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 261
>pdb|1W8A|A Chain A, Third Lrr Domain Of Drosophila Slit
Length = 192
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 46/115 (40%), Gaps = 5/115 (4%)
Query: 114 NLVYLDLAHNSFCGPIPDRIKTLKNLTHXXXXXXXXXXXXPEFLLDLRALTGTLNLSFNQ 173
+LV L+L N G P+ + ++ + L L L TLNL NQ
Sbjct: 55 HLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLK-TLNLYDNQ 113
Query: 174 FSGQIPEMYGHFPVMVSLDLRNN--NLSGEIPQVGSLLNQGPTAFSGNPGLCGFP 226
S +P + H + SL+L +N N + + L + + +G CG P
Sbjct: 114 ISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRK--KSLNGGAARCGAP 166
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 21/95 (22%)
Query: 475 VHGNIKSTKILLDDELHPCISGFGLNR----LLPGTSKVTKNETIVTSGTGSRISAISNV 530
+H +IK IL+D LNR L+ S +T+ T G+R V
Sbjct: 164 LHRDIKDENILID-----------LNRGELKLIDFGSGALLKDTVYTDFDGTR------V 206
Query: 531 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
Y PE Y + V+S GI+L +++ G +P
Sbjct: 207 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 21/95 (22%)
Query: 475 VHGNIKSTKILLDDELHPCISGFGLNR----LLPGTSKVTKNETIVTSGTGSRISAISNV 530
+H +IK IL+D LNR L+ S +T+ T G+R V
Sbjct: 165 LHRDIKDENILID-----------LNRGELKLIDFGSGALLKDTVYTDFDGTR------V 207
Query: 531 YLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
Y PE Y + V+S GI+L +++ G +P
Sbjct: 208 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|2NTS|A Chain A, Crystal Structure Of Sek-Hvb5.1
pdb|2NTT|A Chain A, Crystal Structure Of Sek
pdb|2NTT|B Chain B, Crystal Structure Of Sek
Length = 217
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 10/85 (11%)
Query: 470 SPRKYVHGNIKSTKILLDDE----LHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRIS 525
S KY++G + +T LD ++ I+G N T+KV+ N+ VT+ I
Sbjct: 73 SNTKYIYGGVTATNEYLDKSRNIPINIWING---NHKTISTNKVSTNKKFVTA---QEID 126
Query: 526 AISNVYLAPEARIYGSKFTQKCDVY 550
YL E IYG T+K + Y
Sbjct: 127 VKLRKYLQEEYNIYGHNGTKKGEEY 151
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 94/225 (41%), Gaps = 31/225 (13%)
Query: 354 KNGIM--YKV---VVGRGSGMGAPTVVAVRRLTEGDATWRFKDF---ESEVEAIARV-QH 404
KN I+ YKV V+G G G + +R E A +D EVE R Q
Sbjct: 10 KNAIIDDYKVTSQVLGLGIN-GKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC 68
Query: 405 PNIVRLKAFY---YANDEKLLI-SDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTA 460
P+IVR+ Y YA + LLI + + G L++ + + EA +I +
Sbjct: 69 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTER--EAS-EIMKSIG 125
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
+ Y+H + H ++K +L + P N +L T ET TS
Sbjct: 126 EAIQYLHSIN---IAHRDVKPENLLYTSK-RP-------NAILKLTDFGFAKET--TSHN 172
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
+ Y+APE + K+ + CD++S G+++ +L G P
Sbjct: 173 SLTEPCYTPYYVAPEV-LGPEKYDKSCDMWSLGVIMYILLCGYPP 216
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 17/108 (15%)
Query: 463 LMYIHEYSPRKYVHGNIKSTKILLD----DELHPCISGFGLN-RLLPGTSKVTKNETIVT 517
L YIHE +YVHG+IK+ +LL D+++ ++ +GL+ R P + E
Sbjct: 164 LEYIHE---NEYVHGDIKAANLLLGYKNPDQVY--LADYGLSYRYCPNGNHKQYQENPRK 218
Query: 518 SGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
G+ I L G +++ DV G +L L G+LP
Sbjct: 219 GHNGT----IEFTSLDAHK---GVALSRRSDVEILGYCMLRWLCGKLP 259
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 51/122 (41%), Gaps = 18/122 (14%)
Query: 447 LPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506
+P + KIA + L ++H S +H ++K + +L++ FG++ L
Sbjct: 133 IPEDILGKIAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKXCDFGISGYL--V 188
Query: 507 SKVTKNETIVTSGTGSRISAISNVYLAPE---ARIYGSKFTQKCDVYSFGIVLLEILTGR 563
V K+ I A Y APE + ++ K D++S GI +E+ R
Sbjct: 189 DDVAKD-----------IDAGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILR 237
Query: 564 LP 565
P
Sbjct: 238 FP 239
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 48/238 (20%), Positives = 95/238 (39%), Gaps = 29/238 (12%)
Query: 340 EDLLRASAY----VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTE--GDATWRFKDFE 393
+D+L Y V+GK ++ + + A +V V + T G +T +D +
Sbjct: 18 DDVLFEDVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLST---EDLK 74
Query: 394 SEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARL 453
E ++HP+IV L Y ++ ++ +F+ L + +D+
Sbjct: 75 REASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEI-VKRADAGFVYSEAVAS 133
Query: 454 KIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPC---ISGFGLNRLLPGTSKVT 510
+ L Y H+ +H ++K +LL + + + FG+ L + V
Sbjct: 134 HYMRQILEALRYCHD---NNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVA 190
Query: 511 KNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAG 568
G R+ + ++APE + + + DV+ G++L +L+G LP G
Sbjct: 191 ----------GGRVG--TPHFMAPEV-VKREPYGKPVDVWGCGVILFILLSGCLPFYG 235
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 64/171 (37%), Gaps = 26/171 (15%)
Query: 395 EVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLK 454
EV + +QH NI+ LK+ + N LI ++ N L + P S+ +
Sbjct: 83 EVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNPDVSMRVIK-----S 136
Query: 455 IAQGTARGLMYIHEYSPRKYVHGNIKSTKILL---DDELHPC--ISGFGLNRLLPGTSKV 509
G+ + H R+ +H ++K +LL D P I FGL R +
Sbjct: 137 FLYQLINGVNFCHS---RRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQ 193
Query: 510 TKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEIL 560
+E I Y PE + ++ D++S + E+L
Sbjct: 194 FTHEIITLW------------YRPPEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|3EA6|A Chain A, Atomic Resolution Of Crystal Structure Of Sek
Length = 219
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 10/82 (12%)
Query: 473 KYVHGNIKSTKILLDDE----LHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAIS 528
KY++G + +T LD ++ I+G N T+KV+ N+ VT+ I
Sbjct: 76 KYIYGGVTATNEYLDKSRNIPINIWING---NHKTISTNKVSTNKKFVTA---QEIDVKL 129
Query: 529 NVYLAPEARIYGSKFTQKCDVY 550
YL E IYG T+K + Y
Sbjct: 130 RKYLQEEYNIYGHNGTKKGEEY 151
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 29.6 bits (65), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 92/225 (40%), Gaps = 31/225 (13%)
Query: 354 KNGIM--YKV---VVGRGSGMGAPTVVAVRRLTEGDATWRFKDF---ESEVEAIARV-QH 404
KN I+ YKV V+G G G + +R E A +D EVE R Q
Sbjct: 56 KNAIIDDYKVTSQVLGLGIN-GKVLQIFNKRTQEKFALKXLQDCPKARREVELHWRASQC 114
Query: 405 PNIVRLKAFY---YANDEKLLI-SDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTA 460
P+IVR+ Y YA + LLI + + G L++ + + EA +I +
Sbjct: 115 PHIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTER--EAS-EIXKSIG 171
Query: 461 RGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGT 520
+ Y+H + H ++K +L + P N +L T ET TS
Sbjct: 172 EAIQYLHSIN---IAHRDVKPENLLYTSK-RP-------NAILKLTDFGFAKET--TSHN 218
Query: 521 GSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLP 565
+ Y+APE + K+ + CD +S G++ +L G P
Sbjct: 219 SLTTPCYTPYYVAPEV-LGPEKYDKSCDXWSLGVIXYILLCGYPP 262
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.137 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,734,154
Number of Sequences: 62578
Number of extensions: 728557
Number of successful extensions: 3339
Number of sequences better than 100.0: 922
Number of HSP's better than 100.0 without gapping: 362
Number of HSP's successfully gapped in prelim test: 560
Number of HSP's that attempted gapping in prelim test: 2093
Number of HSP's gapped (non-prelim): 981
length of query: 642
length of database: 14,973,337
effective HSP length: 105
effective length of query: 537
effective length of database: 8,402,647
effective search space: 4512221439
effective search space used: 4512221439
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)