Query 006522
Match_columns 642
No_of_seqs 563 out of 4521
Neff 9.4
Searched_HMMs 46136
Date Fri Mar 29 00:30:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006522.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/006522hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 1.6E-63 3.4E-68 589.5 40.0 496 66-641 453-953 (968)
2 KOG1187 Serine/threonine prote 100.0 6.2E-55 1.3E-59 450.4 26.5 281 335-640 63-353 (361)
3 KOG0581 Mitogen-activated prot 100.0 1.2E-48 2.6E-53 380.2 21.7 256 337-634 76-334 (364)
4 KOG0192 Tyrosine kinase specif 100.0 1.2E-47 2.6E-52 393.0 25.2 252 347-640 46-304 (362)
5 KOG0615 Serine/threonine prote 100.0 6.1E-48 1.3E-52 377.3 14.1 250 346-634 176-436 (475)
6 KOG0197 Tyrosine kinases [Sign 100.0 3.2E-47 6.9E-52 387.5 18.9 254 345-641 209-463 (468)
7 KOG1026 Nerve growth factor re 100.0 3.8E-47 8.2E-52 405.2 19.7 263 346-639 490-762 (774)
8 KOG0595 Serine/threonine-prote 100.0 8.1E-47 1.8E-51 370.2 19.1 193 349-568 17-216 (429)
9 KOG0575 Polo-like serine/threo 100.0 8.2E-46 1.8E-50 380.6 22.9 245 346-634 22-268 (592)
10 KOG0598 Ribosomal protein S6 k 100.0 3.2E-45 6.9E-50 356.3 18.3 238 346-627 29-269 (357)
11 KOG0591 NIMA (never in mitosis 100.0 9.5E-46 2.1E-50 344.6 9.9 254 347-637 24-283 (375)
12 KOG0196 Tyrosine kinase, EPH ( 100.0 1.2E-45 2.6E-50 385.5 10.6 260 346-641 633-893 (996)
13 KOG0661 MAPK related serine/th 100.0 7.6E-44 1.7E-48 354.5 14.9 259 347-634 15-290 (538)
14 KOG0600 Cdc2-related protein k 100.0 8.4E-43 1.8E-47 349.6 20.7 257 347-634 122-399 (560)
15 KOG0593 Predicted protein kina 100.0 1.9E-43 4.1E-48 332.5 14.2 258 348-634 8-283 (396)
16 KOG0592 3-phosphoinositide-dep 100.0 7.6E-43 1.7E-47 352.7 19.4 257 346-634 77-337 (604)
17 KOG0198 MEKK and related serin 100.0 5.5E-43 1.2E-47 347.5 17.9 251 346-635 21-276 (313)
18 KOG1095 Protein tyrosine kinas 100.0 9.1E-43 2E-47 385.0 19.0 262 346-639 696-961 (1025)
19 KOG0597 Serine-threonine prote 100.0 5.8E-43 1.2E-47 353.4 15.7 243 347-634 7-250 (808)
20 KOG0582 Ste20-like serine/thre 100.0 6.8E-42 1.5E-46 338.1 22.1 260 346-634 30-292 (516)
21 cd05102 PTKc_VEGFR3 Catalytic 100.0 1.5E-41 3.1E-46 354.6 25.1 265 346-641 11-336 (338)
22 KOG0583 Serine/threonine prote 100.0 1.9E-41 4.2E-46 350.7 23.9 245 346-633 21-273 (370)
23 KOG0193 Serine/threonine prote 100.0 9.9E-43 2.1E-47 356.0 13.8 256 346-640 396-654 (678)
24 KOG0578 p21-activated serine/t 100.0 3.7E-42 7.9E-47 351.0 17.1 243 347-634 278-522 (550)
25 KOG0588 Serine/threonine prote 100.0 1.3E-41 2.8E-46 350.6 19.5 244 347-634 17-262 (786)
26 PHA02988 hypothetical protein; 100.0 7.9E-41 1.7E-45 339.6 24.8 261 335-640 13-280 (283)
27 KOG0659 Cdk activating kinase 100.0 3.6E-41 7.8E-46 312.1 20.0 259 347-635 7-281 (318)
28 KOG0616 cAMP-dependent protein 100.0 2.8E-41 6E-46 317.4 17.1 225 346-604 48-274 (355)
29 KOG4721 Serine/threonine prote 100.0 1.1E-41 2.5E-46 343.7 12.8 239 347-638 129-367 (904)
30 KOG1094 Discoidin domain recep 100.0 1.3E-40 2.8E-45 337.5 20.4 262 346-640 542-805 (807)
31 cd05104 PTKc_Kit Catalytic dom 100.0 3.6E-40 7.8E-45 348.1 24.0 263 346-639 39-374 (375)
32 cd05096 PTKc_DDR1 Catalytic do 100.0 8.7E-40 1.9E-44 335.9 25.8 267 347-638 10-304 (304)
33 cd05106 PTKc_CSF-1R Catalytic 100.0 4.3E-40 9.4E-45 347.1 23.6 264 346-639 42-372 (374)
34 KOG0194 Protein tyrosine kinas 100.0 1.1E-40 2.5E-45 345.4 18.2 256 348-641 163-422 (474)
35 KOG0663 Protein kinase PITSLRE 100.0 3E-40 6.4E-45 315.0 19.2 258 347-634 81-360 (419)
36 cd05064 PTKc_EphR_A10 Catalyti 100.0 1.8E-39 3.8E-44 327.0 25.2 255 346-639 9-265 (266)
37 cd05571 STKc_PKB Catalytic dom 100.0 3.9E-40 8.4E-45 341.2 20.5 242 349-634 2-250 (323)
38 cd05585 STKc_YPK1_like Catalyt 100.0 4.7E-40 1E-44 339.0 20.9 238 350-631 1-240 (312)
39 KOG0611 Predicted serine/threo 100.0 1.9E-40 4.2E-45 322.6 16.6 243 347-634 58-302 (668)
40 KOG0201 Serine/threonine prote 100.0 1.1E-41 2.4E-46 336.5 7.2 244 348-634 19-262 (467)
41 cd05105 PTKc_PDGFR_alpha Catal 100.0 2.4E-39 5.2E-44 342.8 24.7 265 346-641 41-399 (400)
42 cd05631 STKc_GRK4 Catalytic do 100.0 2.1E-39 4.5E-44 329.8 22.4 249 347-634 5-260 (285)
43 cd05048 PTKc_Ror Catalytic Dom 100.0 5.8E-39 1.3E-43 326.3 25.4 261 347-639 10-283 (283)
44 cd05595 STKc_PKB_beta Catalyti 100.0 1.8E-39 3.9E-44 336.2 21.5 242 349-634 2-250 (323)
45 cd05593 STKc_PKB_gamma Catalyt 100.0 2.1E-39 4.5E-44 336.3 21.6 243 348-634 1-250 (328)
46 KOG4278 Protein tyrosine kinas 100.0 2.2E-40 4.8E-45 337.0 13.7 252 346-639 271-523 (1157)
47 PTZ00263 protein kinase A cata 100.0 1.6E-39 3.4E-44 337.5 20.3 241 346-633 22-269 (329)
48 KOG0658 Glycogen synthase kina 100.0 3E-40 6.5E-45 320.8 13.7 259 346-634 28-305 (364)
49 cd05114 PTKc_Tec_Rlk Catalytic 100.0 1E-38 2.2E-43 319.5 25.3 247 347-637 9-256 (256)
50 KOG0605 NDR and related serine 100.0 1.9E-39 4.1E-44 328.6 19.9 253 347-628 146-435 (550)
51 KOG3653 Transforming growth fa 100.0 2.6E-39 5.6E-44 321.9 20.3 261 347-640 215-504 (534)
52 cd05612 STKc_PRKX_like Catalyt 100.0 1.6E-39 3.5E-44 331.6 19.0 241 347-634 6-253 (291)
53 cd07871 STKc_PCTAIRE3 Catalyti 100.0 7.7E-39 1.7E-43 326.2 23.6 261 347-634 10-284 (288)
54 KOG0580 Serine/threonine prote 100.0 1E-39 2.2E-44 298.3 14.0 245 346-634 26-272 (281)
55 cd07869 STKc_PFTAIRE1 Catalyti 100.0 5.9E-39 1.3E-43 329.6 21.4 262 347-634 10-287 (303)
56 KOG0589 Serine/threonine prote 100.0 1.6E-39 3.4E-44 330.5 16.7 247 347-635 9-258 (426)
57 PF07714 Pkinase_Tyr: Protein 100.0 3.8E-39 8.2E-44 323.1 19.4 254 347-636 4-259 (259)
58 cd05108 PTKc_EGFR Catalytic do 100.0 1.6E-38 3.4E-43 328.4 24.5 256 346-640 11-269 (316)
59 cd05045 PTKc_RET Catalytic dom 100.0 2.5E-38 5.5E-43 322.8 25.8 262 347-640 5-287 (290)
60 cd05054 PTKc_VEGFR Catalytic d 100.0 1.4E-38 3E-43 331.1 24.1 264 347-640 12-334 (337)
61 KOG0694 Serine/threonine prote 100.0 4.1E-39 9E-44 334.9 19.8 239 346-629 372-613 (694)
62 PTZ00426 cAMP-dependent protei 100.0 5.3E-39 1.1E-43 334.3 20.5 243 346-634 34-283 (340)
63 cd05584 STKc_p70S6K Catalytic 100.0 8.3E-39 1.8E-43 331.3 21.9 246 348-634 2-255 (323)
64 KOG0585 Ca2+/calmodulin-depend 100.0 5.5E-39 1.2E-43 319.3 18.8 252 347-634 102-371 (576)
65 cd05093 PTKc_TrkB Catalytic do 100.0 4.9E-38 1.1E-42 320.3 26.2 262 346-640 9-280 (288)
66 cd06649 PKc_MEK2 Catalytic dom 100.0 1.6E-38 3.5E-43 330.3 23.0 196 347-569 10-205 (331)
67 cd05107 PTKc_PDGFR_beta Cataly 100.0 3.3E-38 7.1E-43 333.9 25.5 263 346-639 41-399 (401)
68 PLN00034 mitogen-activated pro 100.0 1.5E-38 3.3E-43 333.6 22.4 244 347-634 79-327 (353)
69 cd05590 STKc_nPKC_eta Catalyti 100.0 1.1E-38 2.4E-43 329.8 21.0 237 349-629 2-241 (320)
70 cd05052 PTKc_Abl Catalytic dom 100.0 4.7E-38 1E-42 316.0 24.9 251 346-639 10-262 (263)
71 cd05062 PTKc_IGF-1R Catalytic 100.0 5.2E-38 1.1E-42 318.3 25.3 261 346-638 10-277 (277)
72 cd05594 STKc_PKB_alpha Catalyt 100.0 5.8E-39 1.3E-43 332.8 18.7 243 349-634 2-251 (325)
73 cd05111 PTK_HER3 Pseudokinase 100.0 2.7E-38 6E-43 320.6 23.2 258 347-641 12-270 (279)
74 cd05614 STKc_MSK2_N N-terminal 100.0 1.4E-38 3E-43 331.2 21.5 253 347-634 5-266 (332)
75 cd05608 STKc_GRK1 Catalytic do 100.0 2.6E-38 5.6E-43 320.9 22.8 249 350-634 1-256 (280)
76 cd05618 STKc_aPKC_iota Catalyt 100.0 1.7E-38 3.6E-43 329.7 21.9 243 348-629 1-250 (329)
77 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 2.9E-38 6.3E-43 318.7 23.0 260 349-637 2-268 (269)
78 cd05592 STKc_nPKC_theta_delta 100.0 1.9E-38 4.2E-43 327.4 22.1 241 349-633 2-246 (316)
79 cd05049 PTKc_Trk Catalytic dom 100.0 5.6E-38 1.2E-42 318.4 25.1 260 347-638 10-280 (280)
80 PTZ00267 NIMA-related protein 100.0 2.7E-38 5.9E-43 343.7 24.3 251 346-634 71-322 (478)
81 cd05588 STKc_aPKC Catalytic do 100.0 1.7E-38 3.8E-43 329.6 21.7 246 349-633 2-260 (329)
82 cd05033 PTKc_EphR Catalytic do 100.0 9.4E-38 2E-42 314.4 26.3 256 346-639 8-265 (266)
83 cd07848 STKc_CDKL5 Catalytic d 100.0 1.7E-38 3.6E-43 323.6 20.9 261 347-634 6-283 (287)
84 cd05591 STKc_nPKC_epsilon Cata 100.0 1.7E-38 3.6E-43 328.8 21.0 242 349-634 2-253 (321)
85 cd05072 PTKc_Lyn Catalytic dom 100.0 5.4E-38 1.2E-42 315.2 24.1 249 347-639 11-261 (261)
86 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 3.5E-38 7.5E-43 318.9 22.8 246 349-637 2-274 (274)
87 cd05084 PTKc_Fes Catalytic dom 100.0 6.6E-38 1.4E-42 312.8 24.4 249 349-638 2-252 (252)
88 cd05094 PTKc_TrkC Catalytic do 100.0 9.1E-38 2E-42 318.8 25.7 262 347-640 10-283 (291)
89 KOG0033 Ca2+/calmodulin-depend 100.0 5.2E-40 1.1E-44 300.2 8.1 244 346-634 15-266 (355)
90 KOG0660 Mitogen-activated prot 100.0 1.3E-38 2.8E-43 308.9 18.2 259 347-634 27-309 (359)
91 PHA03212 serine/threonine kina 100.0 4.3E-38 9.3E-43 333.0 24.0 255 347-634 97-375 (391)
92 cd06650 PKc_MEK1 Catalytic dom 100.0 3.8E-38 8.3E-43 327.5 23.1 197 346-569 9-205 (333)
93 cd05068 PTKc_Frk_like Catalyti 100.0 1.1E-37 2.4E-42 313.0 25.6 251 346-639 10-261 (261)
94 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 2.6E-38 5.6E-43 329.2 21.5 248 347-635 6-257 (333)
95 cd05607 STKc_GRK7 Catalytic do 100.0 4E-38 8.7E-43 319.0 22.2 247 350-635 1-250 (277)
96 cd05091 PTKc_Ror2 Catalytic do 100.0 1E-37 2.2E-42 317.2 25.0 260 347-638 10-282 (283)
97 cd05047 PTKc_Tie Catalytic dom 100.0 1.3E-37 2.9E-42 314.1 25.6 255 348-640 1-269 (270)
98 cd05042 PTKc_Aatyk Catalytic d 100.0 4.8E-38 1E-42 317.0 22.4 260 349-637 2-268 (269)
99 KOG0599 Phosphorylase kinase g 100.0 5.7E-39 1.2E-43 297.8 14.1 248 347-634 22-282 (411)
100 cd05053 PTKc_FGFR Catalytic do 100.0 1.3E-37 2.7E-42 318.1 25.4 264 346-640 16-292 (293)
101 cd05582 STKc_RSK_N N-terminal 100.0 7.8E-39 1.7E-43 330.9 16.5 243 348-631 2-245 (318)
102 cd05088 PTKc_Tie2 Catalytic do 100.0 9.5E-38 2.1E-42 320.5 24.3 258 346-641 11-282 (303)
103 cd05619 STKc_nPKC_theta Cataly 100.0 4.6E-38 9.9E-43 324.5 22.0 241 349-633 2-246 (316)
104 cd05570 STKc_PKC Catalytic dom 100.0 4E-38 8.7E-43 325.4 21.2 242 349-634 2-251 (318)
105 cd05063 PTKc_EphR_A2 Catalytic 100.0 2.1E-37 4.5E-42 312.2 25.8 257 346-639 9-267 (268)
106 cd05620 STKc_nPKC_delta Cataly 100.0 5.6E-38 1.2E-42 324.0 22.0 242 348-633 1-246 (316)
107 cd05575 STKc_SGK Catalytic dom 100.0 2.5E-38 5.5E-43 327.8 19.5 238 349-630 2-242 (323)
108 cd05058 PTKc_Met_Ron Catalytic 100.0 2.7E-37 5.8E-42 310.3 26.3 258 348-641 1-261 (262)
109 cd05075 PTKc_Axl Catalytic dom 100.0 2.1E-37 4.6E-42 312.8 25.7 259 347-639 4-271 (272)
110 KOG1025 Epidermal growth facto 100.0 1.7E-39 3.6E-44 340.7 10.5 264 340-640 694-958 (1177)
111 cd05059 PTKc_Tec_like Catalyti 100.0 1.5E-37 3.1E-42 311.2 24.2 246 346-636 8-255 (256)
112 cd05115 PTKc_Zap-70 Catalytic 100.0 2.1E-37 4.6E-42 310.1 25.4 251 350-639 3-255 (257)
113 cd05113 PTKc_Btk_Bmx Catalytic 100.0 1.4E-37 3.1E-42 311.2 24.0 246 347-637 9-256 (256)
114 KOG1989 ARK protein kinase fam 100.0 5.4E-39 1.2E-43 344.7 14.4 262 346-640 41-312 (738)
115 cd05085 PTKc_Fer Catalytic dom 100.0 2.2E-37 4.8E-42 308.6 25.1 247 349-637 2-249 (250)
116 KOG0594 Protein kinase PCTAIRE 100.0 1E-37 2.2E-42 304.0 22.0 265 348-635 17-302 (323)
117 cd05090 PTKc_Ror1 Catalytic do 100.0 2.1E-37 4.6E-42 314.8 25.3 259 347-638 10-282 (283)
118 cd05626 STKc_LATS2 Catalytic d 100.0 4.6E-38 1E-42 333.2 21.3 256 347-634 6-304 (381)
119 cd05617 STKc_aPKC_zeta Catalyt 100.0 7E-38 1.5E-42 324.8 22.1 244 348-630 1-249 (327)
120 cd05589 STKc_PKN Catalytic dom 100.0 7.6E-38 1.6E-42 324.4 22.2 238 347-629 4-246 (324)
121 cd05055 PTKc_PDGFR Catalytic d 100.0 1.5E-37 3.2E-42 318.9 24.0 259 346-639 39-301 (302)
122 KOG4257 Focal adhesion tyrosin 100.0 1.9E-38 4.1E-43 323.6 16.9 259 345-641 392-651 (974)
123 cd05035 PTKc_Axl_like Catalyti 100.0 3.3E-37 7.2E-42 311.5 25.9 259 347-639 4-272 (273)
124 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 1.5E-37 3.3E-42 312.1 23.2 245 349-636 2-261 (262)
125 cd08228 STKc_Nek6 Catalytic do 100.0 1.1E-37 2.4E-42 314.0 22.1 258 347-640 7-266 (267)
126 cd05032 PTKc_InsR_like Catalyt 100.0 1.8E-37 3.8E-42 314.3 23.7 261 346-638 10-277 (277)
127 cd07859 STKc_TDY_MAPK_plant Ca 100.0 1.5E-37 3.2E-42 324.4 23.6 259 347-634 5-289 (338)
128 cd07868 STKc_CDK8 Catalytic do 100.0 7.8E-38 1.7E-42 323.5 21.3 205 346-569 5-219 (317)
129 cd05602 STKc_SGK1 Catalytic do 100.0 5.4E-38 1.2E-42 325.6 20.0 241 349-633 2-245 (325)
130 cd05051 PTKc_DDR Catalytic dom 100.0 3E-37 6.4E-42 315.9 25.2 268 347-638 10-296 (296)
131 cd05060 PTKc_Syk_like Catalyti 100.0 3.9E-37 8.5E-42 308.2 25.5 253 349-640 2-256 (257)
132 cd05605 STKc_GRK4_like Catalyt 100.0 1.1E-37 2.5E-42 317.1 21.8 249 347-634 5-260 (285)
133 cd05116 PTKc_Syk Catalytic dom 100.0 3.1E-37 6.6E-42 309.0 24.6 250 349-638 2-254 (257)
134 cd05103 PTKc_VEGFR2 Catalytic 100.0 3.4E-37 7.3E-42 321.9 25.5 264 346-640 11-340 (343)
135 cd05587 STKc_cPKC Catalytic do 100.0 1.3E-37 2.8E-42 322.7 22.1 239 347-629 5-246 (324)
136 cd05089 PTKc_Tie1 Catalytic do 100.0 3.1E-37 6.8E-42 315.8 24.7 256 347-640 7-276 (297)
137 cd05596 STKc_ROCK Catalytic do 100.0 9.6E-38 2.1E-42 329.0 21.4 250 346-634 47-303 (370)
138 cd05036 PTKc_ALK_LTK Catalytic 100.0 4.5E-37 9.8E-42 311.4 25.5 260 347-638 11-277 (277)
139 cd05616 STKc_cPKC_beta Catalyt 100.0 1.3E-37 2.7E-42 322.5 21.8 239 347-629 5-246 (323)
140 cd05109 PTKc_HER2 Catalytic do 100.0 3.9E-37 8.4E-42 312.2 24.8 258 347-641 12-270 (279)
141 cd05101 PTKc_FGFR2 Catalytic d 100.0 3.5E-37 7.6E-42 316.6 24.7 264 346-640 19-297 (304)
142 cd05604 STKc_SGK3 Catalytic do 100.0 5.5E-38 1.2E-42 325.5 18.8 242 349-634 2-246 (325)
143 cd05097 PTKc_DDR_like Catalyti 100.0 4.1E-37 8.8E-42 314.7 24.8 267 347-638 10-295 (295)
144 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 1.1E-37 2.3E-42 317.0 20.4 271 347-641 9-283 (283)
145 cd05603 STKc_SGK2 Catalytic do 100.0 8.4E-38 1.8E-42 323.6 19.7 239 348-630 1-242 (321)
146 PTZ00283 serine/threonine prot 100.0 1.8E-37 4E-42 337.3 23.3 250 347-634 37-296 (496)
147 cd05066 PTKc_EphR_A Catalytic 100.0 5.6E-37 1.2E-41 309.0 25.1 257 346-639 8-266 (267)
148 KOG4279 Serine/threonine prote 100.0 4.9E-39 1.1E-43 331.0 10.1 257 337-634 570-831 (1226)
149 cd05086 PTKc_Aatyk2 Catalytic 100.0 7.1E-37 1.5E-41 308.3 25.7 259 349-637 2-267 (268)
150 cd05148 PTKc_Srm_Brk Catalytic 100.0 4.5E-37 9.8E-42 308.4 24.0 250 346-639 10-261 (261)
151 cd05043 PTK_Ryk Pseudokinase d 100.0 5.4E-37 1.2E-41 311.3 24.7 264 346-641 10-278 (280)
152 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 1.1E-37 2.3E-42 312.6 19.2 246 349-637 2-258 (258)
153 cd05071 PTKc_Src Catalytic dom 100.0 8E-37 1.7E-41 306.9 25.5 249 347-639 11-260 (262)
154 cd05061 PTKc_InsR Catalytic do 100.0 9E-37 1.9E-41 311.0 26.1 261 347-639 11-278 (288)
155 cd07872 STKc_PCTAIRE2 Catalyti 100.0 4.4E-37 9.6E-42 316.6 24.0 261 347-634 11-285 (309)
156 PHA03211 serine/threonine kina 100.0 3.1E-37 6.8E-42 330.3 23.6 258 347-635 174-455 (461)
157 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 8.5E-37 1.8E-41 306.3 25.2 247 347-638 11-259 (260)
158 cd05098 PTKc_FGFR1 Catalytic d 100.0 7.8E-37 1.7E-41 314.4 25.5 264 346-641 22-301 (307)
159 KOG0199 ACK and related non-re 100.0 4.7E-38 1E-42 324.5 16.2 257 346-638 114-371 (1039)
160 cd05599 STKc_NDR_like Catalyti 100.0 1.3E-37 2.7E-42 328.3 20.0 259 347-634 6-295 (364)
161 cd05621 STKc_ROCK2 Catalytic d 100.0 1.7E-37 3.8E-42 326.6 21.0 248 347-635 48-304 (370)
162 cd08229 STKc_Nek7 Catalytic do 100.0 2.7E-37 5.9E-42 311.1 21.5 258 347-640 7-266 (267)
163 cd05628 STKc_NDR1 Catalytic do 100.0 2.6E-37 5.7E-42 325.4 22.3 208 347-568 6-238 (363)
164 KOG0584 Serine/threonine prote 100.0 2.4E-38 5.3E-43 326.1 13.8 244 346-634 44-295 (632)
165 cd07862 STKc_CDK6 Catalytic do 100.0 4.9E-37 1.1E-41 313.3 23.0 261 347-634 6-286 (290)
166 cd05601 STKc_CRIK Catalytic do 100.0 6.6E-38 1.4E-42 325.8 16.9 250 347-634 6-262 (330)
167 KOG2345 Serine/threonine prote 100.0 7.7E-39 1.7E-43 293.7 8.5 270 346-640 25-301 (302)
168 cd05629 STKc_NDR_like_fungal C 100.0 9.4E-38 2E-42 330.6 18.2 255 347-634 6-304 (377)
169 cd05092 PTKc_TrkA Catalytic do 100.0 9.5E-37 2.1E-41 309.5 24.7 259 347-638 10-280 (280)
170 cd07867 STKc_CDC2L6 Catalytic 100.0 2.6E-37 5.7E-42 319.5 21.0 204 347-569 6-219 (317)
171 cd05065 PTKc_EphR_B Catalytic 100.0 9.9E-37 2.1E-41 307.5 24.6 259 346-639 8-268 (269)
172 cd05095 PTKc_DDR2 Catalytic do 100.0 1E-36 2.2E-41 311.9 25.0 268 347-638 10-296 (296)
173 PTZ00036 glycogen synthase kin 100.0 3.5E-37 7.6E-42 331.2 22.1 258 346-634 70-350 (440)
174 cd05625 STKc_LATS1 Catalytic d 100.0 1.4E-37 3E-42 329.9 18.7 209 347-569 6-251 (382)
175 KOG0577 Serine/threonine prote 100.0 3.2E-38 6.9E-43 320.1 13.0 242 348-634 32-277 (948)
176 cd05069 PTKc_Yes Catalytic dom 100.0 1.5E-36 3.2E-41 304.6 25.0 247 347-638 11-259 (260)
177 cd05100 PTKc_FGFR3 Catalytic d 100.0 1.8E-36 3.8E-41 315.6 26.3 264 346-640 16-294 (334)
178 cd06619 PKc_MKK5 Catalytic dom 100.0 9.5E-37 2.1E-41 309.3 23.6 246 347-635 6-253 (279)
179 cd05050 PTKc_Musk Catalytic do 100.0 1.3E-36 2.9E-41 309.8 24.8 260 347-638 10-288 (288)
180 cd05615 STKc_cPKC_alpha Cataly 100.0 4.5E-37 9.7E-42 318.2 21.6 240 346-629 4-246 (323)
181 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 1.5E-36 3.3E-41 308.7 25.1 267 347-640 9-284 (284)
182 cd07853 STKc_NLK Catalytic dom 100.0 5.1E-37 1.1E-41 324.4 22.4 258 347-634 5-287 (372)
183 cd08529 STKc_FA2-like Catalyti 100.0 1.2E-36 2.6E-41 304.3 23.8 246 347-634 5-252 (256)
184 KOG2052 Activin A type IB rece 100.0 1.4E-37 3E-42 307.4 16.6 263 347-640 216-504 (513)
185 cd05040 PTKc_Ack_like Catalyti 100.0 1.1E-36 2.5E-41 304.8 23.6 254 349-637 2-256 (257)
186 cd05573 STKc_ROCK_NDR_like Cat 100.0 9.3E-38 2E-42 327.5 16.3 255 347-634 6-284 (350)
187 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 1.5E-36 3.2E-41 305.7 24.1 258 347-640 7-266 (267)
188 cd05632 STKc_GRK5 Catalytic do 100.0 1E-36 2.2E-41 310.1 23.1 249 347-634 5-260 (285)
189 cd05056 PTKc_FAK Catalytic dom 100.0 1.6E-36 3.4E-41 306.2 24.3 256 346-641 10-267 (270)
190 PRK13184 pknD serine/threonine 100.0 7.3E-37 1.6E-41 341.0 23.9 269 347-639 7-290 (932)
191 cd05586 STKc_Sck1_like Catalyt 100.0 1.5E-37 3.3E-42 323.0 17.3 237 350-629 1-243 (330)
192 cd05110 PTKc_HER4 Catalytic do 100.0 1.7E-36 3.6E-41 311.3 24.4 259 346-641 11-270 (303)
193 cd05082 PTKc_Csk Catalytic dom 100.0 1.9E-36 4.2E-41 303.0 24.0 244 346-639 10-256 (256)
194 KOG0032 Ca2+/calmodulin-depend 100.0 9.4E-37 2E-41 315.4 22.4 246 347-634 40-292 (382)
195 cd05598 STKc_LATS Catalytic do 100.0 2.4E-37 5.3E-42 327.4 18.3 209 347-569 6-247 (376)
196 cd00192 PTKc Catalytic domain 100.0 2.1E-36 4.5E-41 303.3 24.1 256 348-637 1-262 (262)
197 cd05057 PTKc_EGFR_like Catalyt 100.0 2.7E-36 5.9E-41 306.0 25.2 257 346-640 11-269 (279)
198 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 1.3E-36 2.8E-41 304.7 22.5 244 349-637 2-259 (259)
199 cd05099 PTKc_FGFR4 Catalytic d 100.0 3.9E-36 8.5E-41 310.2 26.5 263 346-640 16-294 (314)
200 KOG0610 Putative serine/threon 100.0 1.3E-36 2.8E-41 298.4 21.5 258 347-632 82-389 (459)
201 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 2.3E-36 5E-41 307.3 24.3 264 346-639 8-283 (284)
202 cd05630 STKc_GRK6 Catalytic do 100.0 1.2E-36 2.6E-41 309.5 22.1 248 347-634 5-260 (285)
203 cd05067 PTKc_Lck_Blk Catalytic 100.0 2.7E-36 6E-41 302.6 24.4 247 347-638 11-259 (260)
204 cd05044 PTKc_c-ros Catalytic d 100.0 1.3E-36 2.9E-41 306.4 22.2 259 348-638 1-269 (269)
205 cd05622 STKc_ROCK1 Catalytic d 100.0 7.9E-37 1.7E-41 321.9 21.4 251 346-635 47-304 (371)
206 cd05112 PTKc_Itk Catalytic dom 100.0 3.5E-36 7.5E-41 301.1 24.9 247 347-637 9-256 (256)
207 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 2.4E-36 5.2E-41 307.0 23.9 264 347-640 9-284 (284)
208 cd08227 PK_STRAD_alpha Pseudok 100.0 1.6E-36 3.4E-41 315.0 22.9 205 348-568 4-212 (327)
209 cd06646 STKc_MAP4K5 Catalytic 100.0 6.7E-37 1.5E-41 308.3 19.5 250 347-635 14-265 (267)
210 cd06615 PKc_MEK Catalytic doma 100.0 3.1E-36 6.8E-41 310.0 24.8 260 347-635 6-287 (308)
211 cd06625 STKc_MEKK3_like Cataly 100.0 2.6E-36 5.7E-41 303.2 23.6 249 347-635 7-260 (263)
212 cd08219 STKc_Nek3 Catalytic do 100.0 1.9E-36 4.1E-41 302.9 22.3 247 347-635 5-252 (255)
213 cd06654 STKc_PAK1 Catalytic do 100.0 2.4E-36 5.1E-41 309.1 23.4 245 347-634 25-269 (296)
214 cd05039 PTKc_Csk_like Catalyti 100.0 5.1E-36 1.1E-40 300.0 25.2 245 346-639 10-256 (256)
215 cd05034 PTKc_Src_like Catalyti 100.0 3.8E-36 8.2E-41 301.7 24.4 248 347-638 11-260 (261)
216 cd05041 PTKc_Fes_like Catalyti 100.0 4.5E-36 9.7E-41 299.4 24.6 248 349-638 2-251 (251)
217 cd07876 STKc_JNK2 Catalytic do 100.0 3.3E-36 7.1E-41 316.7 24.7 193 347-569 26-225 (359)
218 PHA03207 serine/threonine kina 100.0 2.2E-36 4.8E-41 321.3 22.9 259 347-634 97-374 (392)
219 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 2.9E-36 6.2E-41 306.7 22.8 252 347-636 10-267 (284)
220 cd07873 STKc_PCTAIRE1 Catalyti 100.0 2.7E-36 5.9E-41 309.5 22.7 261 347-634 11-285 (301)
221 cd06624 STKc_ASK Catalytic dom 100.0 3.8E-36 8.3E-41 303.0 23.3 248 347-634 13-264 (268)
222 cd06637 STKc_TNIK Catalytic do 100.0 4.1E-36 9E-41 303.4 23.4 247 347-634 11-268 (272)
223 cd05046 PTK_CCK4 Pseudokinase 100.0 4.5E-36 9.8E-41 303.7 23.7 259 347-638 10-275 (275)
224 cd06643 STKc_SLK Catalytic dom 100.0 6.6E-36 1.4E-40 303.7 25.0 248 347-634 10-261 (282)
225 cd07861 STKc_CDK1_euk Catalyti 100.0 6.2E-36 1.3E-40 304.3 24.5 262 347-634 5-281 (285)
226 cd05073 PTKc_Hck Catalytic dom 100.0 6.8E-36 1.5E-40 299.8 24.3 249 347-639 11-260 (260)
227 KOG0667 Dual-specificity tyros 100.0 6E-37 1.3E-41 319.0 17.0 193 347-569 191-391 (586)
228 KOG0574 STE20-like serine/thre 100.0 1.9E-38 4.2E-43 297.7 5.2 245 347-634 38-282 (502)
229 cd07874 STKc_JNK3 Catalytic do 100.0 2.7E-36 5.9E-41 316.9 22.1 257 347-634 22-310 (355)
230 cd07875 STKc_JNK1 Catalytic do 100.0 4.8E-36 1E-40 316.1 23.4 193 347-569 29-228 (364)
231 PTZ00266 NIMA-related protein 100.0 3E-36 6.5E-41 337.3 22.9 251 347-634 18-294 (1021)
232 cd07878 STKc_p38beta_MAPK11 Ca 100.0 3.1E-36 6.8E-41 315.0 21.5 251 347-634 20-297 (343)
233 cd05633 STKc_GRK3 Catalytic do 100.0 7E-36 1.5E-40 302.9 23.3 244 349-634 1-254 (279)
234 KOG0983 Mitogen-activated prot 100.0 9E-37 1.9E-41 283.4 14.9 254 337-634 89-348 (391)
235 cd05597 STKc_DMPK_like Catalyt 100.0 1.4E-36 3E-41 315.6 18.3 199 347-568 6-210 (331)
236 cd07844 STKc_PCTAIRE_like Cata 100.0 4.6E-36 9.9E-41 306.3 21.7 262 347-634 10-287 (291)
237 cd06628 STKc_MAPKKK_Byr2_like 100.0 1.4E-35 2.9E-40 298.8 24.6 250 347-634 5-263 (267)
238 cd06642 STKc_STK25-YSK1 Cataly 100.0 5E-36 1.1E-40 303.7 21.4 244 347-634 9-252 (277)
239 PHA03209 serine/threonine kina 100.0 3.8E-36 8.2E-41 315.5 21.0 187 346-566 70-256 (357)
240 cd05627 STKc_NDR2 Catalytic do 100.0 2.1E-36 4.6E-41 318.2 19.1 208 347-568 6-238 (360)
241 cd06645 STKc_MAP4K3 Catalytic 100.0 5.7E-36 1.2E-40 301.6 21.4 249 347-634 14-264 (267)
242 KOG4717 Serine/threonine prote 100.0 1.3E-36 2.8E-41 303.9 16.3 245 347-634 23-269 (864)
243 PTZ00284 protein kinase; Provi 100.0 5.5E-36 1.2E-40 325.6 22.7 255 347-634 134-437 (467)
244 cd05623 STKc_MRCK_alpha Cataly 100.0 1.5E-36 3.3E-41 315.6 17.3 199 347-568 6-210 (332)
245 cd05074 PTKc_Tyro3 Catalytic d 100.0 2.3E-35 4.9E-40 298.1 25.3 261 347-640 4-273 (273)
246 KOG0666 Cyclin C-dependent kin 100.0 6.1E-37 1.3E-41 289.3 12.6 275 347-635 29-337 (438)
247 cd06640 STKc_MST4 Catalytic do 100.0 1.7E-35 3.8E-40 299.8 24.0 245 347-635 9-253 (277)
248 cd06644 STKc_STK10_LOK Catalyt 100.0 2.3E-35 5E-40 301.3 25.0 248 347-634 17-268 (292)
249 cd06609 STKc_MST3_like Catalyt 100.0 1.9E-35 4.1E-40 299.0 24.1 245 347-634 6-250 (274)
250 cd07863 STKc_CDK4 Catalytic do 100.0 8.9E-36 1.9E-40 303.7 21.7 261 347-634 5-284 (288)
251 cd07870 STKc_PFTAIRE2 Catalyti 100.0 1.3E-35 2.9E-40 302.9 22.5 263 347-634 10-287 (291)
252 cd06655 STKc_PAK2 Catalytic do 100.0 1.7E-35 3.7E-40 302.7 23.3 242 347-634 24-268 (296)
253 cd07839 STKc_CDK5 Catalytic do 100.0 6E-36 1.3E-40 304.3 19.7 262 347-634 5-280 (284)
254 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 1.3E-35 2.9E-40 302.1 22.1 250 347-634 6-261 (286)
255 KOG0200 Fibroblast/platelet-de 100.0 4.3E-36 9.3E-41 332.5 20.0 265 346-639 300-579 (609)
256 cd06631 STKc_YSK4 Catalytic do 100.0 1.3E-35 2.9E-40 298.5 21.9 252 347-634 5-261 (265)
257 cd06651 STKc_MEKK3 Catalytic d 100.0 2E-35 4.3E-40 297.5 23.1 246 347-634 7-260 (266)
258 cd07847 STKc_CDKL1_4 Catalytic 100.0 2.8E-35 6.1E-40 299.6 24.4 261 347-634 6-282 (286)
259 cd08223 STKc_Nek4 Catalytic do 100.0 2.9E-35 6.3E-40 294.5 24.0 246 347-634 5-253 (257)
260 PF00069 Pkinase: Protein kina 100.0 4.1E-36 8.9E-41 301.1 17.8 252 347-634 4-256 (260)
261 cd06658 STKc_PAK5 Catalytic do 100.0 5.6E-36 1.2E-40 305.6 19.0 246 347-635 27-272 (292)
262 cd05083 PTKc_Chk Catalytic dom 100.0 2.5E-35 5.3E-40 294.6 23.1 243 346-638 10-253 (254)
263 cd06917 STKc_NAK1_like Catalyt 100.0 1.6E-35 3.5E-40 299.9 22.0 246 347-634 6-254 (277)
264 cd06659 STKc_PAK6 Catalytic do 100.0 8.8E-36 1.9E-40 304.9 20.1 244 348-634 27-270 (297)
265 cd06638 STKc_myosinIIIA Cataly 100.0 1.8E-35 3.9E-40 301.1 22.3 251 347-635 23-283 (286)
266 cd06611 STKc_SLK_like Catalyti 100.0 1.7E-35 3.6E-40 300.4 21.7 248 347-634 10-261 (280)
267 cd05624 STKc_MRCK_beta Catalyt 100.0 3.2E-36 6.9E-41 313.0 16.8 199 347-568 6-210 (331)
268 cd08221 STKc_Nek9 Catalytic do 100.0 4.6E-35 9.9E-40 293.0 24.5 248 347-635 5-253 (256)
269 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 5.1E-35 1.1E-39 297.9 25.2 257 347-634 6-265 (287)
270 cd07846 STKc_CDKL2_3 Catalytic 100.0 7.3E-36 1.6E-40 303.9 18.5 258 347-634 6-282 (286)
271 cd07860 STKc_CDK2_3 Catalytic 100.0 2.7E-35 5.9E-40 299.4 22.7 261 347-634 5-280 (284)
272 cd06629 STKc_MAPKKK_Bck1_like 100.0 2.9E-35 6.3E-40 297.2 22.6 253 347-634 6-268 (272)
273 cd06612 STKc_MST1_2 Catalytic 100.0 2E-35 4.4E-40 295.4 21.2 245 347-634 8-252 (256)
274 KOG0579 Ste20-like serine/thre 100.0 8.5E-37 1.8E-41 311.5 11.2 247 348-634 38-288 (1187)
275 cd06656 STKc_PAK3 Catalytic do 100.0 1.7E-35 3.6E-40 302.9 20.8 245 347-634 24-268 (297)
276 cd07831 STKc_MOK Catalytic dom 100.0 4.2E-35 9.1E-40 297.6 23.3 257 347-634 4-278 (282)
277 cd08218 STKc_Nek1 Catalytic do 100.0 3.9E-35 8.5E-40 293.5 22.4 246 347-634 5-252 (256)
278 cd08220 STKc_Nek8 Catalytic do 100.0 5.4E-35 1.2E-39 292.3 23.4 245 347-634 5-252 (256)
279 cd05580 STKc_PKA Catalytic dom 100.0 4.4E-35 9.6E-40 298.9 23.0 240 347-633 6-252 (290)
280 cd06641 STKc_MST3 Catalytic do 100.0 6.9E-35 1.5E-39 295.4 24.2 244 347-634 9-252 (277)
281 cd06632 STKc_MEKK1_plant Catal 100.0 5.4E-35 1.2E-39 292.6 23.2 245 347-634 5-254 (258)
282 cd05606 STKc_beta_ARK Catalyti 100.0 5.3E-35 1.2E-39 296.3 23.4 244 349-634 1-254 (278)
283 cd06607 STKc_TAO Catalytic dom 100.0 8.3E-35 1.8E-39 299.4 25.1 243 347-634 20-266 (307)
284 cd07832 STKc_CCRK Catalytic do 100.0 6.9E-35 1.5E-39 296.7 23.8 260 347-634 5-281 (286)
285 cd07833 STKc_CDKL Catalytic do 100.0 3.8E-35 8.3E-40 298.9 21.9 262 347-634 6-284 (288)
286 smart00219 TyrKc Tyrosine kina 100.0 9E-35 1.9E-39 290.9 24.2 253 347-636 4-258 (258)
287 cd06630 STKc_MEKK1 Catalytic d 100.0 4.8E-35 1E-39 294.9 22.2 251 347-634 5-263 (268)
288 cd06613 STKc_MAP4K3_like Catal 100.0 3.4E-35 7.4E-40 294.9 20.9 250 347-634 8-259 (262)
289 cd06610 STKc_OSR1_SPAK Catalyt 100.0 8.2E-35 1.8E-39 292.9 23.7 258 347-634 6-263 (267)
290 cd06639 STKc_myosinIIIB Cataly 100.0 7.7E-35 1.7E-39 297.3 23.7 250 347-634 27-286 (291)
291 cd07842 STKc_CDK8_like Catalyt 100.0 3.8E-35 8.3E-40 303.2 21.7 272 347-634 5-312 (316)
292 KOG0586 Serine/threonine prote 100.0 7.6E-36 1.6E-40 307.5 16.2 244 347-634 61-305 (596)
293 cd05609 STKc_MAST Catalytic do 100.0 7.5E-35 1.6E-39 299.4 23.7 263 347-638 6-273 (305)
294 cd06605 PKc_MAPKK Catalytic do 100.0 4E-35 8.6E-40 295.0 21.0 251 347-634 6-256 (265)
295 KOG4250 TANK binding protein k 100.0 5.5E-36 1.2E-40 312.4 15.0 201 347-570 18-228 (732)
296 cd05577 STKc_GRK Catalytic dom 100.0 6.6E-35 1.4E-39 295.5 22.6 243 350-631 1-245 (277)
297 cd06617 PKc_MKK3_6 Catalytic d 100.0 4E-35 8.7E-40 298.0 21.1 250 347-634 6-260 (283)
298 cd06652 STKc_MEKK2 Catalytic d 100.0 8.1E-35 1.8E-39 292.8 22.8 248 347-634 7-260 (265)
299 cd05572 STKc_cGK_PKG Catalytic 100.0 9.8E-35 2.1E-39 291.7 23.4 242 350-634 1-251 (262)
300 cd06616 PKc_MKK4 Catalytic dom 100.0 3.9E-35 8.6E-40 298.9 20.3 252 347-634 9-266 (288)
301 cd07836 STKc_Pho85 Catalytic d 100.0 1.1E-34 2.4E-39 294.9 23.4 262 347-634 5-280 (284)
302 cd08216 PK_STRAD Pseudokinase 100.0 1.3E-34 2.9E-39 298.9 24.2 261 354-634 12-294 (314)
303 cd08528 STKc_Nek10 Catalytic d 100.0 1.2E-34 2.7E-39 292.2 23.4 252 347-637 5-268 (269)
304 cd06626 STKc_MEKK4 Catalytic d 100.0 1.7E-34 3.8E-39 290.1 24.2 252 347-634 5-260 (264)
305 cd07841 STKc_CDK7 Catalytic do 100.0 5.8E-35 1.3E-39 299.2 21.1 260 347-635 5-282 (298)
306 cd07837 STKc_CdkB_plant Cataly 100.0 1.1E-34 2.4E-39 296.7 23.0 264 347-634 6-290 (295)
307 cd07843 STKc_CDC2L1 Catalytic 100.0 9.5E-35 2.1E-39 296.9 22.2 262 347-634 10-289 (293)
308 cd07835 STKc_CDK1_like Catalyt 100.0 1.3E-34 2.8E-39 294.3 22.9 261 347-634 4-279 (283)
309 KOG0596 Dual specificity; seri 100.0 1.4E-35 3E-40 300.1 15.3 249 347-634 366-626 (677)
310 cd07849 STKc_ERK1_2_like Catal 100.0 2.1E-35 4.6E-40 307.7 17.2 263 347-635 10-292 (336)
311 cd05574 STKc_phototropin_like 100.0 1.7E-34 3.8E-39 298.3 23.9 260 347-634 6-288 (316)
312 PHA03390 pk1 serine/threonine- 100.0 1.6E-34 3.4E-39 291.0 22.7 235 350-634 24-261 (267)
313 cd07840 STKc_CDK9_like Catalyt 100.0 1.6E-34 3.4E-39 294.0 23.0 261 347-634 4-283 (287)
314 cd06648 STKc_PAK_II Catalytic 100.0 1.5E-34 3.2E-39 294.2 22.6 245 347-634 24-268 (285)
315 cd08226 PK_STRAD_beta Pseudoki 100.0 2.6E-34 5.6E-39 298.5 24.5 265 349-634 5-307 (328)
316 KOG0986 G protein-coupled rece 100.0 5.1E-36 1.1E-40 296.3 11.0 243 347-629 190-435 (591)
317 cd06635 STKc_TAO1 Catalytic do 100.0 4.6E-34 1E-38 295.1 25.9 245 347-636 30-278 (317)
318 cd06636 STKc_MAP4K4_6 Catalyti 100.0 1.3E-34 2.9E-39 294.1 21.4 247 347-634 21-278 (282)
319 cd08217 STKc_Nek2 Catalytic do 100.0 2.5E-34 5.4E-39 288.8 22.7 251 348-634 6-261 (265)
320 PHA03210 serine/threonine kina 100.0 6.5E-35 1.4E-39 318.4 19.6 270 347-634 153-453 (501)
321 cd05611 STKc_Rim15_like Cataly 100.0 2.4E-34 5.2E-39 288.5 22.2 244 349-636 3-249 (260)
322 KOG4645 MAPKKK (MAP kinase kin 100.0 1E-36 2.2E-41 334.9 5.3 251 347-634 1240-1493(1509)
323 cd07830 STKc_MAK_like Catalyti 100.0 1.4E-34 3.1E-39 293.9 20.7 259 347-634 4-279 (283)
324 cd06657 STKc_PAK4 Catalytic do 100.0 2.4E-34 5.2E-39 293.5 22.2 244 348-634 26-269 (292)
325 cd06647 STKc_PAK_I Catalytic d 100.0 1.2E-34 2.6E-39 296.0 20.0 246 347-635 24-269 (293)
326 PHA02882 putative serine/threo 100.0 2.1E-34 4.6E-39 294.2 21.7 260 347-637 17-294 (294)
327 cd06608 STKc_myosinIII_like Ca 100.0 3E-34 6.6E-39 290.0 22.4 250 347-634 11-271 (275)
328 cd07865 STKc_CDK9 Catalytic do 100.0 2.9E-34 6.4E-39 295.6 22.7 265 347-634 17-306 (310)
329 cd05578 STKc_Yank1 Catalytic d 100.0 9.2E-35 2E-39 291.2 18.4 245 347-633 5-253 (258)
330 KOG0604 MAP kinase-activated p 100.0 2.1E-35 4.5E-40 277.8 12.6 247 346-634 66-321 (400)
331 cd08225 STKc_Nek5 Catalytic do 100.0 2.3E-34 5E-39 288.0 21.0 247 347-634 5-253 (257)
332 KOG1006 Mitogen-activated prot 100.0 6.8E-37 1.5E-41 283.2 2.3 252 348-634 70-326 (361)
333 cd07852 STKc_MAPK15 Catalytic 100.0 6.5E-34 1.4E-38 296.7 24.0 261 347-635 12-295 (337)
334 cd05579 STKc_MAST_like Catalyt 100.0 2.4E-34 5.1E-39 289.0 19.9 254 350-637 1-256 (265)
335 PLN00009 cyclin-dependent kina 100.0 5.4E-34 1.2E-38 291.5 22.8 260 347-634 7-283 (294)
336 KOG1035 eIF-2alpha kinase GCN2 100.0 5.7E-35 1.2E-39 319.7 16.1 258 348-634 485-870 (1351)
337 cd07845 STKc_CDK10 Catalytic d 100.0 5.9E-34 1.3E-38 293.3 22.7 261 347-634 12-289 (309)
338 cd07864 STKc_CDK12 Catalytic d 100.0 3E-34 6.4E-39 294.5 20.3 260 347-634 12-298 (302)
339 cd05583 STKc_MSK_N N-terminal 100.0 4.1E-34 9E-39 291.4 21.2 257 347-638 5-266 (288)
340 cd05613 STKc_MSK1_N N-terminal 100.0 8E-34 1.7E-38 289.6 23.1 253 347-634 5-267 (290)
341 cd07855 STKc_ERK5 Catalytic do 100.0 2.4E-34 5.3E-39 299.5 19.6 262 347-634 10-293 (334)
342 cd06623 PKc_MAPKK_plant_like C 100.0 1.2E-33 2.7E-38 283.8 23.9 251 347-635 6-256 (264)
343 cd06614 STKc_PAK Catalytic dom 100.0 1.3E-33 2.8E-38 287.5 24.3 246 347-634 24-269 (286)
344 cd07850 STKc_JNK Catalytic dom 100.0 2.8E-34 6.1E-39 301.3 19.9 193 347-569 21-220 (353)
345 KOG0607 MAP kinase-interacting 100.0 7.9E-35 1.7E-39 275.9 13.9 269 338-634 74-360 (463)
346 cd06618 PKc_MKK7 Catalytic dom 100.0 4.9E-34 1.1E-38 292.1 20.3 251 346-635 19-273 (296)
347 PTZ00024 cyclin-dependent prot 100.0 5.2E-34 1.1E-38 297.2 20.7 270 347-634 14-312 (335)
348 cd06633 STKc_TAO3 Catalytic do 100.0 2E-33 4.3E-38 289.8 24.7 243 347-634 26-272 (313)
349 cd07858 STKc_TEY_MAPK_plant Ca 100.0 5.2E-34 1.1E-38 297.3 19.5 265 347-639 10-297 (337)
350 cd06627 STKc_Cdc7_like Catalyt 100.0 2.6E-33 5.7E-38 279.6 23.6 245 347-634 5-250 (254)
351 cd06634 STKc_TAO2 Catalytic do 100.0 1.9E-33 4.2E-38 289.2 23.0 244 347-635 20-267 (308)
352 cd06653 STKc_MEKK3_like_1 Cata 100.0 2.6E-33 5.6E-38 281.8 23.3 249 346-634 6-260 (264)
353 cd06606 STKc_MAPKKK Catalytic 100.0 3.2E-33 6.9E-38 279.6 23.6 247 347-634 5-256 (260)
354 cd07866 STKc_BUR1 Catalytic do 100.0 1.2E-33 2.6E-38 291.2 21.1 270 347-634 13-307 (311)
355 KOG0690 Serine/threonine prote 100.0 9E-35 2E-39 275.9 11.0 238 346-627 172-411 (516)
356 cd05118 STKc_CMGC Catalytic do 100.0 2.2E-33 4.7E-38 285.2 21.6 258 348-634 5-279 (283)
357 cd05122 PKc_STE Catalytic doma 100.0 5.9E-33 1.3E-37 276.4 24.1 246 347-634 5-250 (253)
358 cd07879 STKc_p38delta_MAPK13 C 100.0 2.9E-33 6.4E-38 292.2 22.3 256 347-640 20-304 (342)
359 cd07880 STKc_p38gamma_MAPK12 C 100.0 2.9E-33 6.2E-38 292.3 21.6 253 347-634 20-297 (343)
360 cd07857 STKc_MPK1 Catalytic do 100.0 3.5E-33 7.7E-38 290.5 22.2 266 347-634 5-291 (332)
361 cd07877 STKc_p38alpha_MAPK14 C 100.0 2.1E-33 4.5E-38 293.6 20.5 257 347-634 22-299 (345)
362 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 4.7E-33 1E-37 288.7 22.4 257 347-635 15-288 (328)
363 cd07838 STKc_CDK4_6_like Catal 100.0 1.2E-32 2.6E-37 280.3 24.7 259 347-634 4-283 (287)
364 cd07854 STKc_MAPK4_6 Catalytic 100.0 3.7E-33 8E-38 291.5 21.3 258 347-634 10-299 (342)
365 cd05123 STKc_AGC Catalytic dom 100.0 5.6E-33 1.2E-37 276.7 21.1 238 350-631 1-240 (250)
366 cd07851 STKc_p38 Catalytic dom 100.0 2.3E-33 5E-38 293.1 18.7 253 347-634 20-297 (343)
367 cd07834 STKc_MAPK Catalytic do 100.0 2.7E-33 5.8E-38 291.3 19.0 265 347-639 5-295 (330)
368 cd08530 STKc_CNK2-like Catalyt 100.0 4.6E-33 1E-37 278.3 19.9 247 347-634 5-252 (256)
369 cd08215 STKc_Nek Catalytic dom 100.0 1.3E-32 2.9E-37 275.0 23.0 248 347-634 5-254 (258)
370 cd07829 STKc_CDK_like Catalyti 100.0 1.1E-32 2.4E-37 279.7 21.8 258 348-634 5-278 (282)
371 cd05581 STKc_PDK1 Catalytic do 100.0 4.9E-33 1.1E-37 282.0 19.0 256 347-634 6-276 (280)
372 KOG1151 Tousled-like protein k 100.0 7.9E-34 1.7E-38 279.3 12.5 256 348-633 469-739 (775)
373 cd08222 STKc_Nek11 Catalytic d 100.0 6.8E-33 1.5E-37 278.0 18.6 248 347-634 5-256 (260)
374 cd05610 STKc_MASTL Catalytic d 100.0 1.9E-32 4E-37 308.2 24.1 143 347-502 9-153 (669)
375 cd05576 STKc_RPK118_like Catal 100.0 8E-33 1.7E-37 273.4 17.5 221 353-630 4-224 (237)
376 KOG1024 Receptor-like protein 100.0 7.4E-33 1.6E-37 269.0 16.5 265 346-641 288-557 (563)
377 KOG0669 Cyclin T-dependent kin 100.0 9.1E-35 2E-39 267.0 2.8 265 347-634 22-314 (376)
378 KOG0696 Serine/threonine prote 100.0 1.1E-33 2.4E-38 276.1 10.4 238 346-627 353-593 (683)
379 KOG0587 Traf2- and Nck-interac 100.0 1.5E-32 3.3E-37 292.0 18.3 248 347-634 24-281 (953)
380 KOG4236 Serine/threonine prote 100.0 2E-33 4.4E-38 281.7 9.5 243 347-632 569-816 (888)
381 KOG0984 Mitogen-activated prot 100.0 1.5E-32 3.2E-37 245.6 13.9 226 337-588 41-270 (282)
382 KOG0662 Cyclin-dependent kinas 100.0 2.7E-32 5.9E-37 238.4 14.7 197 348-569 8-206 (292)
383 KOG0603 Ribosomal protein S6 k 100.0 2.2E-32 4.8E-37 283.5 15.2 233 348-634 328-562 (612)
384 KOG0671 LAMMER dual specificit 100.0 6.4E-33 1.4E-37 270.0 10.0 255 348-634 95-405 (415)
385 KOG0612 Rho-associated, coiled 100.0 7.5E-33 1.6E-37 300.8 11.3 198 347-568 80-283 (1317)
386 PLN03225 Serine/threonine-prot 100.0 2.5E-31 5.4E-36 291.7 18.1 263 346-634 136-449 (566)
387 KOG0608 Warts/lats-like serine 100.0 1.2E-31 2.6E-36 274.3 14.2 212 347-572 634-877 (1034)
388 smart00220 S_TKc Serine/Threon 100.0 1.9E-30 4.1E-35 256.5 21.5 240 354-634 1-240 (244)
389 KOG0614 cGMP-dependent protein 100.0 2.1E-32 4.5E-37 273.8 5.1 238 348-628 426-665 (732)
390 PLN03224 probable serine/threo 100.0 1.8E-30 3.9E-35 277.7 20.3 263 346-634 149-499 (507)
391 KOG0695 Serine/threonine prote 100.0 1E-30 2.2E-35 249.2 13.7 243 346-627 254-502 (593)
392 KOG0668 Casein kinase II, alph 100.0 1.7E-30 3.6E-35 235.8 11.8 253 347-634 43-321 (338)
393 KOG1027 Serine/threonine prote 100.0 6.1E-31 1.3E-35 278.6 8.2 246 346-634 513-766 (903)
394 KOG0664 Nemo-like MAPK-related 100.0 3.1E-31 6.7E-36 246.3 1.8 261 348-635 59-343 (449)
395 KOG0665 Jun-N-terminal kinase 100.0 1.3E-28 2.8E-33 234.6 13.3 189 349-568 24-219 (369)
396 cd00180 PKc Catalytic domain o 100.0 1.7E-27 3.8E-32 229.6 21.4 213 350-635 1-214 (215)
397 KOG1152 Signal transduction se 100.0 3.3E-29 7.2E-34 254.7 9.0 195 347-568 566-771 (772)
398 KOG1290 Serine/threonine prote 100.0 3.7E-27 8.1E-32 235.8 18.7 127 347-486 83-221 (590)
399 KOG1167 Serine/threonine prote 99.9 4E-28 8.6E-33 240.0 10.7 272 347-634 41-380 (418)
400 KOG1345 Serine/threonine kinas 99.9 5.2E-28 1.1E-32 225.0 9.9 249 346-635 28-284 (378)
401 smart00221 STYKc Protein kinas 99.9 1.3E-26 2.9E-31 226.5 18.6 199 347-568 4-202 (225)
402 KOG0576 Mitogen-activated prot 99.9 6.9E-28 1.5E-32 249.1 5.4 248 347-633 20-269 (829)
403 PLN00181 protein SPA1-RELATED; 99.9 5.3E-27 1.2E-31 270.6 11.9 207 400-634 27-264 (793)
404 smart00750 KIND kinase non-cat 99.9 6E-26 1.3E-30 213.4 14.8 170 430-640 1-170 (176)
405 KOG0670 U4/U6-associated splic 99.9 6.2E-27 1.4E-31 235.3 7.3 271 334-634 421-745 (752)
406 KOG0195 Integrin-linked kinase 99.9 1.1E-26 2.3E-31 216.1 6.7 248 348-641 196-448 (448)
407 PLN00113 leucine-rich repeat r 99.9 5.5E-24 1.2E-28 252.4 17.3 181 18-203 23-205 (968)
408 PRK09188 serine/threonine prot 99.9 6.9E-23 1.5E-27 210.4 14.8 165 346-538 22-193 (365)
409 COG0515 SPS1 Serine/threonine 99.9 1E-20 2.2E-25 195.7 24.3 263 347-634 5-274 (384)
410 KOG0590 Checkpoint kinase and 99.9 4.6E-23 9.9E-28 225.6 4.8 261 345-634 321-584 (601)
411 KOG1164 Casein kinase (serine/ 99.9 4.3E-20 9.3E-25 190.5 22.6 264 346-639 22-297 (322)
412 KOG1023 Natriuretic peptide re 99.9 3.1E-21 6.8E-26 201.3 13.5 217 399-640 1-225 (484)
413 PLN03150 hypothetical protein; 99.8 2.2E-20 4.8E-25 207.7 16.7 134 20-157 368-510 (623)
414 cd05147 RIO1_euk RIO kinase fa 99.8 1.2E-20 2.7E-25 178.3 11.6 139 348-503 3-167 (190)
415 KOG0603 Ribosomal protein S6 k 99.8 7.4E-22 1.6E-26 205.5 3.0 191 349-568 1-193 (612)
416 PRK12274 serine/threonine prot 99.8 3.2E-20 6.9E-25 173.1 12.8 194 347-568 7-209 (218)
417 KOG1163 Casein kinase (serine/ 99.8 7E-20 1.5E-24 168.3 13.5 258 347-637 20-282 (341)
418 PRK10359 lipopolysaccharide co 99.8 4E-20 8.7E-25 176.5 10.1 165 347-560 36-216 (232)
419 KOG1165 Casein kinase (serine/ 99.8 4.6E-19 1E-23 170.2 16.6 204 346-571 32-241 (449)
420 KOG1240 Protein kinase contain 99.8 1.1E-20 2.5E-25 205.9 4.9 253 346-637 27-293 (1431)
421 cd05145 RIO1_like RIO kinase f 99.8 4.4E-19 9.6E-24 168.4 14.3 140 348-504 3-168 (190)
422 PRK10345 hypothetical protein; 99.8 8.8E-19 1.9E-23 167.0 13.5 135 346-500 6-156 (210)
423 KOG4158 BRPK/PTEN-induced prot 99.8 1.7E-18 3.6E-23 169.9 13.0 202 403-636 274-511 (598)
424 PF14531 Kinase-like: Kinase-l 99.7 1E-17 2.3E-22 164.8 9.5 199 346-569 16-253 (288)
425 PRK14879 serine/threonine prot 99.7 8.9E-17 1.9E-21 155.7 14.3 135 348-502 2-143 (211)
426 TIGR03724 arch_bud32 Kae1-asso 99.7 8.3E-17 1.8E-21 154.3 12.8 131 349-502 1-138 (199)
427 smart00090 RIO RIO-like kinase 99.7 9.4E-17 2E-21 157.0 12.6 139 347-503 33-198 (237)
428 PRK09605 bifunctional UGMP fam 99.7 9.9E-17 2.1E-21 176.8 13.4 135 346-502 337-476 (535)
429 KOG1166 Mitotic checkpoint ser 99.7 5.8E-17 1.2E-21 181.0 9.4 191 345-564 701-901 (974)
430 KOG0606 Microtubule-associated 99.7 5.8E-17 1.2E-21 177.3 7.6 215 346-627 87-304 (1205)
431 cd05144 RIO2_C RIO kinase fami 99.7 4.8E-16 1E-20 148.8 12.3 135 346-504 19-176 (198)
432 KOG1033 eIF-2alpha kinase PEK/ 99.7 5.1E-17 1.1E-21 166.5 5.8 179 419-632 330-509 (516)
433 KOG0590 Checkpoint kinase and 99.6 3.3E-17 7.2E-22 179.7 -0.1 252 348-633 26-284 (601)
434 PRK01723 3-deoxy-D-manno-octul 99.6 5.5E-15 1.2E-19 144.9 15.0 138 345-502 34-191 (239)
435 KOG0617 Ras suppressor protein 99.6 2.6E-17 5.6E-22 143.8 -2.3 152 64-220 32-184 (264)
436 cd05120 APH_ChoK_like Aminogly 99.6 9.5E-15 2.1E-19 133.0 11.8 133 348-502 4-138 (155)
437 cd05119 RIO RIO kinase family, 99.5 3E-14 6.6E-19 135.1 11.9 137 348-504 3-165 (187)
438 KOG0617 Ras suppressor protein 99.5 1.4E-16 3.1E-21 139.2 -5.0 138 66-208 57-195 (264)
439 KOG4237 Extracellular matrix p 99.5 2.4E-14 5.1E-19 141.1 2.9 160 65-225 67-362 (498)
440 KOG1266 Protein kinase [Signal 99.4 1.7E-13 3.6E-18 132.2 7.7 160 395-565 117-281 (458)
441 KOG4194 Membrane glycoprotein 99.4 1.5E-14 3.3E-19 148.6 -0.3 146 74-220 254-403 (873)
442 KOG0444 Cytoskeletal regulator 99.4 1.4E-14 3E-19 149.8 -1.3 151 66-220 33-184 (1255)
443 KOG0472 Leucine-rich repeat pr 99.4 2E-14 4.4E-19 141.7 -1.6 152 66-222 389-541 (565)
444 TIGR01982 UbiB 2-polyprenylphe 99.4 1.4E-12 3E-17 139.1 11.6 141 348-505 123-309 (437)
445 KOG0472 Leucine-rich repeat pr 99.4 8.2E-15 1.8E-19 144.4 -5.1 146 67-220 162-308 (565)
446 KOG0444 Cytoskeletal regulator 99.4 6.5E-14 1.4E-18 144.9 -0.1 79 130-211 215-293 (1255)
447 KOG4194 Membrane glycoprotein 99.4 3.4E-13 7.3E-18 138.9 4.8 151 51-203 48-214 (873)
448 cd05151 ChoK Choline Kinase (C 99.3 2.8E-11 6.1E-16 112.7 11.8 129 348-501 4-135 (170)
449 PLN03150 hypothetical protein; 99.3 1.3E-11 2.8E-16 137.8 10.3 116 115-231 420-537 (623)
450 KOG0601 Cyclin-dependent kinas 99.2 2.3E-11 5.1E-16 127.7 9.0 259 338-633 110-377 (524)
451 KOG0618 Serine/threonine phosp 99.2 1.8E-12 3.9E-17 140.5 0.1 153 66-222 311-489 (1081)
452 KOG1243 Protein kinase [Genera 99.2 3.7E-10 8E-15 119.8 15.6 228 373-641 38-265 (690)
453 PRK04750 ubiB putative ubiquin 99.2 9E-11 2E-15 126.6 9.9 143 348-506 125-317 (537)
454 cd05146 RIO3_euk RIO kinase fa 99.2 3.4E-10 7.4E-15 106.0 12.4 142 348-503 3-174 (197)
455 KOG0532 Leucine-rich repeat (L 99.1 2.7E-12 5.9E-17 132.2 -3.1 131 66-204 122-252 (722)
456 cd05154 ACAD10_11_like Acyl-Co 99.1 3.9E-10 8.4E-15 109.9 11.7 142 348-501 4-205 (223)
457 KOG0601 Cyclin-dependent kinas 99.1 5.1E-11 1.1E-15 125.2 3.3 190 347-564 270-464 (524)
458 PRK15387 E3 ubiquitin-protein 99.1 1.7E-10 3.7E-15 128.8 7.2 115 89-220 342-456 (788)
459 KOG0532 Leucine-rich repeat (L 99.1 1.5E-11 3.2E-16 126.9 -1.7 148 66-221 99-246 (722)
460 COG3642 Mn2+-dependent serine/ 99.0 2.1E-09 4.5E-14 97.1 11.8 131 349-502 3-140 (204)
461 PRK15387 E3 ubiquitin-protein 99.0 3.4E-10 7.3E-15 126.5 7.4 134 66-220 283-433 (788)
462 PLN03210 Resistant to P. syrin 99.0 9.4E-10 2E-14 131.9 11.3 162 57-222 627-838 (1153)
463 PRK15370 E3 ubiquitin-protein 99.0 8.6E-10 1.9E-14 124.0 10.1 125 61-201 174-298 (754)
464 KOG1259 Nischarin, modulator o 99.0 4.2E-11 9.2E-16 114.2 -0.6 131 83-220 278-410 (490)
465 KOG0618 Serine/threonine phosp 99.0 3.5E-11 7.5E-16 130.8 -1.5 126 66-197 360-487 (1081)
466 PRK15370 E3 ubiquitin-protein 99.0 6.5E-10 1.4E-14 124.9 7.3 123 63-201 197-319 (754)
467 PRK15123 lipopolysaccharide co 98.9 2.5E-08 5.4E-13 99.0 16.0 142 348-502 28-194 (268)
468 cd00116 LRR_RI Leucine-rich re 98.9 3.9E-10 8.4E-15 116.5 3.0 135 65-200 81-235 (319)
469 KOG0606 Microtubule-associated 98.9 5E-10 1.1E-14 123.8 3.6 208 349-570 811-1039(1205)
470 KOG1259 Nischarin, modulator o 98.9 1.9E-10 4.1E-15 109.8 0.1 131 66-203 285-416 (490)
471 PF13855 LRR_8: Leucine rich r 98.9 1E-09 2.3E-14 82.8 3.6 61 89-149 1-61 (61)
472 cd00116 LRR_RI Leucine-rich re 98.9 4.1E-10 8.8E-15 116.4 1.6 154 66-220 52-232 (319)
473 PF14580 LRR_9: Leucine-rich r 98.9 1.4E-09 3.1E-14 99.8 5.0 109 86-200 16-127 (175)
474 PF14580 LRR_9: Leucine-rich r 98.9 8.4E-10 1.8E-14 101.4 3.1 120 66-192 20-146 (175)
475 KOG3087 Serine/threonine prote 98.9 2.4E-08 5.1E-13 89.8 11.3 142 347-501 12-164 (229)
476 PF08263 LRRNT_2: Leucine rich 98.9 2.4E-09 5.2E-14 74.0 3.8 41 23-63 2-43 (43)
477 PLN03210 Resistant to P. syrin 98.8 1.2E-08 2.6E-13 122.5 12.0 134 64-203 588-721 (1153)
478 KOG3741 Poly(A) ribonuclease s 98.8 3.7E-08 8.1E-13 101.6 13.1 172 354-564 288-474 (655)
479 COG4886 Leucine-rich repeat (L 98.8 2.3E-09 4.9E-14 114.3 3.5 128 66-199 117-245 (394)
480 PF01163 RIO1: RIO1 family; I 98.8 4.6E-08 1E-12 91.4 10.6 126 357-503 1-156 (188)
481 PF13855 LRR_8: Leucine rich r 98.8 4.7E-09 1E-13 79.2 2.9 59 114-173 2-60 (61)
482 KOG4237 Extracellular matrix p 98.7 2.5E-09 5.3E-14 106.2 0.9 137 90-227 68-206 (498)
483 COG4886 Leucine-rich repeat (L 98.7 1.2E-08 2.7E-13 108.7 4.6 161 55-221 80-244 (394)
484 COG4248 Uncharacterized protei 98.7 6.2E-07 1.3E-11 90.4 15.9 197 346-570 15-226 (637)
485 PF06293 Kdo: Lipopolysacchari 98.6 8.6E-07 1.9E-11 85.1 14.3 105 390-502 56-170 (206)
486 COG0478 RIO-like serine/threon 98.6 3.2E-07 7E-12 88.1 10.2 134 344-500 93-249 (304)
487 KOG2137 Protein kinase [Signal 98.5 3.1E-08 6.6E-13 105.9 2.3 106 456-567 105-211 (700)
488 PRK09902 hypothetical protein; 98.4 6.8E-06 1.5E-10 77.4 14.9 137 351-501 27-178 (216)
489 KOG4579 Leucine-rich repeat (L 98.4 2.7E-08 5.8E-13 84.6 -1.2 130 68-203 30-163 (177)
490 KOG4579 Leucine-rich repeat (L 98.4 1.9E-08 4.2E-13 85.5 -2.4 104 91-199 29-136 (177)
491 KOG1859 Leucine-rich repeat pr 98.4 6.2E-09 1.3E-13 110.6 -6.9 128 89-224 164-294 (1096)
492 KOG3207 Beta-tubulin folding c 98.4 8.7E-08 1.9E-12 96.7 1.5 133 66-199 147-284 (505)
493 KOG3207 Beta-tubulin folding c 98.3 2.2E-07 4.7E-12 93.8 0.4 133 66-200 122-260 (505)
494 COG0661 AarF Predicted unusual 98.2 7.3E-06 1.6E-10 88.3 11.7 150 338-506 120-318 (517)
495 TIGR02172 Fb_sc_TIGR02172 Fibr 98.2 3E-05 6.6E-10 75.4 13.4 138 348-501 7-181 (226)
496 KOG1859 Leucine-rich repeat pr 98.2 3.4E-08 7.3E-13 105.1 -7.8 125 67-199 166-292 (1096)
497 KOG0576 Mitogen-activated prot 98.1 6.6E-07 1.4E-11 94.8 0.8 183 348-568 248-432 (829)
498 PF12260 PIP49_C: Protein-kina 98.1 1.1E-05 2.4E-10 75.8 8.0 103 393-501 7-110 (188)
499 PF12799 LRR_4: Leucine Rich r 98.1 4E-06 8.7E-11 58.0 3.5 36 90-126 2-37 (44)
500 KOG1235 Predicted unusual prot 98.0 2.4E-05 5.1E-10 84.1 10.0 150 337-505 155-357 (538)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.6e-63 Score=589.46 Aligned_cols=496 Identities=28% Similarity=0.489 Sum_probs=346.6
Q ss_pred CEeEEEcCCCCccccCCccccCCCCCCEEEccCCCCCCccccccccCCccceeeccCCcccccCcccccCCCCcCeEecc
Q 006522 66 RVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLS 145 (642)
Q Consensus 66 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 145 (642)
.++.|+|++|.+.|.+|..+ .+++|+.|+|++|++++.+|..+.++++|+.|+|++|++.+.+|..+..+++|+.|+|+
T Consensus 453 ~L~~L~L~~n~~~~~~p~~~-~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 531 (968)
T PLN00113 453 SLQMLSLARNKFFGGLPDSF-GSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLS 531 (968)
T ss_pred CCcEEECcCceeeeecCccc-ccccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECC
Confidence 34555555555555555544 34667777777777777777777788888888888888888888888888888888888
Q ss_pred cccCCCcchhHhhhhccccceeecccccccccCCcccCCCCCCcEEEeecCCCCCCcCccccccccCCcccCCCCCCCCC
Q 006522 146 SNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGLCGF 225 (642)
Q Consensus 146 ~N~l~~~~p~~~~~l~~l~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~~~~~ 225 (642)
+|.++|.+|..+..+++|+ .|+|++|+++|.+|..+.+++.|+.|++++|+++|.+|....+..+....+.||+.+|+.
T Consensus 532 ~N~l~~~~p~~~~~l~~L~-~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~ 610 (968)
T PLN00113 532 HNQLSGQIPASFSEMPVLS-QLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGG 610 (968)
T ss_pred CCcccccCChhHhCcccCC-EEECCCCcccccCChhHhcCcccCEEeccCCcceeeCCCcchhcccChhhhcCCccccCC
Confidence 8888888888888888888 888888888888888888888888888888888888887666667777778888888874
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcEEEEeeehhHHHHHHHhhhhhhhhhhhhhhcCCC
Q 006522 226 PLQSPCPEPENPKVHANPEVEDGPQNPKNTNFGYSGDVKDRGRNGSVVVSVISGVSVVVGVVSVSVWLFRRKRRAREGKM 305 (642)
Q Consensus 226 ~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~vi~~~~vvl~lv~v~~~~~~r~r~~~~~~~ 305 (642)
+.... . + +.. . ........++++++.+++++++++++++++++++++.+..+.
T Consensus 611 ~~~~~-----~-------~-------~c~-----~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 663 (968)
T PLN00113 611 DTTSG-----L-------P-------PCK-----R---VRKTPSWWFYITCTLGAFLVLALVAFGFVFIRGRNNLELKRV 663 (968)
T ss_pred ccccC-----C-------C-------CCc-----c---ccccceeeeehhHHHHHHHHHHHHHHHHHHHHhhhccccccc
Confidence 32100 0 0 000 0 000001112222222222222222222222222221111110
Q ss_pred CCcccccccccccccccccCCceEEecC--CccccHHHHHhh--cccccCccCCceeEEEEecCCCCCCCCeEEEEEEec
Q 006522 306 GKEEKTNDAVLVTDEEEGQKGKFFIIDE--GFSLELEDLLRA--SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLT 381 (642)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~ 381 (642)
+.. .. ......++. ...++++++... ..++||+|+||.||+|+...++ +.||||++.
T Consensus 664 ---~~~-~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~-----~~vavK~~~ 724 (968)
T PLN00113 664 ---ENE-DG----------TWELQFFDSKVSKSITINDILSSLKEENVISRGKKGASYKGKSIKNG-----MQFVVKEIN 724 (968)
T ss_pred ---ccc-cc----------cccccccccccchhhhHHHHHhhCCcccEEccCCCeeEEEEEECCCC-----cEEEEEEcc
Confidence 000 00 000111111 122445554443 3468999999999999986554 899999987
Q ss_pred CCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHH
Q 006522 382 EGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTAR 461 (642)
Q Consensus 382 ~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~ 461 (642)
..... ..+|++++++++|||||+++|+|...+..++||||+++|+|.++++. ++|..+.+|+.|||+
T Consensus 725 ~~~~~-----~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~--------l~~~~~~~i~~~ia~ 791 (968)
T PLN00113 725 DVNSI-----PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRN--------LSWERRRKIAIGIAK 791 (968)
T ss_pred CCccc-----cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHhc--------CCHHHHHHHHHHHHH
Confidence 54322 23568899999999999999999999999999999999999999952 899999999999999
Q ss_pred HHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCCCcccccceeeecCCCcccccCCCcccCccccccCC
Q 006522 462 GLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGS 541 (642)
Q Consensus 462 gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 541 (642)
||+|||+.+.++|+||||||+||+++.++.+++. ||.+...... ....||..|||||++. +.
T Consensus 792 ~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~----------------~~~~~t~~y~aPE~~~-~~ 853 (968)
T PLN00113 792 ALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTD----------------TKCFISSAYVAPETRE-TK 853 (968)
T ss_pred HHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccccC----------------CCccccccccCccccc-CC
Confidence 9999997655899999999999999999988876 6655432111 1235678899999854 47
Q ss_pred CCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHhccCCCccccChhhhhch-hHHHHHHHHHHHHHhcCC
Q 006522 542 KFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEI-HAKRQVLATFHIALNCTE 620 (642)
Q Consensus 542 ~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~-~~~~~~~~~~~l~~~Cl~ 620 (642)
.++.++|||||||++|||+||+.||+........+..|++...... .....+|+.+.... ...++..++.+++.+||+
T Consensus 854 ~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~ 932 (968)
T PLN00113 854 DITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDC-HLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTA 932 (968)
T ss_pred CCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCcc-chhheeCccccCCCCccHHHHHHHHHHHHhhCc
Confidence 7999999999999999999999999765444556677766554332 23445555543221 223566788899999999
Q ss_pred CCCCCCCCHHHHHHHHHhhhc
Q 006522 621 LDPEFRPRMRTVSESLDRVKL 641 (642)
Q Consensus 621 ~dP~~RPs~~ev~~~L~~l~~ 641 (642)
.||++||||+||+++|+++..
T Consensus 933 ~~P~~RPt~~evl~~L~~~~~ 953 (968)
T PLN00113 933 TDPTARPCANDVLKTLESASR 953 (968)
T ss_pred CCchhCcCHHHHHHHHHHhhc
Confidence 999999999999999998743
No 2
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-55 Score=450.36 Aligned_cols=281 Identities=38% Similarity=0.630 Sum_probs=239.7
Q ss_pred ccccHHHHHhhc-----ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeee
Q 006522 335 FSLELEDLLRAS-----AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409 (642)
Q Consensus 335 ~~~~~~~~~~~~-----~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~ 409 (642)
..|+++++..++ .++||+|+||.||+|.+.++ +.||||++....... .++|.+|++++++++|||+|+
T Consensus 63 ~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~------~~vAVK~~~~~~~~~-~~eF~~Ei~~ls~l~H~Nlv~ 135 (361)
T KOG1187|consen 63 RSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDG------TVVAVKRLSSNSGQG-EREFLNEVEILSRLRHPNLVK 135 (361)
T ss_pred ceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCC------CEEEEEEecCCCCcc-hhHHHHHHHHHhcCCCcCccc
Confidence 346777777765 37999999999999999998 799999887754432 367999999999999999999
Q ss_pred EEEEEEeCC-ceEEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCC
Q 006522 410 LKAFYYAND-EKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDD 488 (642)
Q Consensus 410 l~~~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~ 488 (642)
|+|||.+.+ +.+||||||++|+|.++|+..... +++|.+|++||.++|+||+|||+.+.++||||||||+|||||+
T Consensus 136 LlGyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~---~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~ 212 (361)
T KOG1187|consen 136 LLGYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGE---PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDE 212 (361)
T ss_pred EEEEEecCCceEEEEEEccCCCCHHHHhCCCCCC---CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECC
Confidence 999999998 599999999999999999986542 6999999999999999999999998889999999999999999
Q ss_pred CCCeEEecccccccCCC-CCcccccceeeecCCCcccc-cCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCC
Q 006522 489 ELHPCISGFGLNRLLPG-TSKVTKNETIVTSGTGSRIS-AISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPD 566 (642)
Q Consensus 489 ~~~~kl~DfGla~~~~~-~~~~~~~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~ 566 (642)
++++||+|||+|+.... ... .... .||.+|+|||++.. +..+.|+|||||||+|+||+||+.|.
T Consensus 213 ~~~aKlsDFGLa~~~~~~~~~-------------~~~~~~gt~gY~~PEy~~~-g~lt~KsDVySFGVvllElitgr~~~ 278 (361)
T KOG1187|consen 213 DFNAKLSDFGLAKLGPEGDTS-------------VSTTVMGTFGYLAPEYAST-GKLTEKSDVYSFGVVLLELITGRKAV 278 (361)
T ss_pred CCCEEccCccCcccCCccccc-------------eeeecCCCCccCChhhhcc-CCcCcccccccchHHHHHHHhCCccc
Confidence 99999999999976543 210 0011 68999999999655 78999999999999999999999998
Q ss_pred CCCC-CCcccHHHHHHHHHhccCCCccccChhhh-hchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhhh
Q 006522 567 AGPE-NDGKGLESLVRKAFRERRPLSEVIDPALV-KEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 640 (642)
Q Consensus 567 ~~~~-~~~~~l~~~~~~~~~~~~~~~~~~d~~l~-~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l~ 640 (642)
+... .....+..|+....... .+.+++||.+. ......+++.++..+|++|++.+|++||+|.||+++|+.+.
T Consensus 279 d~~~~~~~~~l~~w~~~~~~~~-~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~ 353 (361)
T KOG1187|consen 279 DQSRPRGELSLVEWAKPLLEEG-KLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGIL 353 (361)
T ss_pred CCCCCcccccHHHHHHHHHHCc-chhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhc
Confidence 7543 33445888887777766 57999999987 33332368889999999999999999999999999997765
No 3
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-48 Score=380.25 Aligned_cols=256 Identities=27% Similarity=0.422 Sum_probs=215.2
Q ss_pred ccHHHHHhhcccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEe
Q 006522 337 LELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYA 416 (642)
Q Consensus 337 ~~~~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~ 416 (642)
+++.++. ....||+|..|+|||+.++.++ +.+|+|.+....+....+++.+|++++.+.+||+||++||.|+.
T Consensus 76 i~~~dle--~~~~lG~G~gG~V~kv~Hk~t~-----~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~ 148 (364)
T KOG0581|consen 76 ISLSDLE--RLGVLGSGNGGTVYKVRHKPTG-----KIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYS 148 (364)
T ss_pred cCHHHhh--hhhhcccCCCcEEEEEEEcCCC-----eEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEe
Confidence 3444443 4578999999999999999887 89999999665555556899999999999999999999999999
Q ss_pred CC-ceEEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEe
Q 006522 417 ND-EKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCIS 495 (642)
Q Consensus 417 ~~-~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~ 495 (642)
+. +..++||||.+|||++++...+ .+++...-+|+.+|++||.|||+. .+||||||||+|||++..|++|||
T Consensus 149 ~~~~isI~mEYMDgGSLd~~~k~~g-----~i~E~~L~~ia~~VL~GL~YLh~~--~~IIHRDIKPsNlLvNskGeVKic 221 (364)
T KOG0581|consen 149 NGEEISICMEYMDGGSLDDILKRVG-----RIPEPVLGKIARAVLRGLSYLHEE--RKIIHRDIKPSNLLVNSKGEVKIC 221 (364)
T ss_pred CCceEEeehhhcCCCCHHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHhhc--cCeeeccCCHHHeeeccCCCEEec
Confidence 99 5999999999999999998764 389999999999999999999963 799999999999999999999999
Q ss_pred cccccccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCccc
Q 006522 496 GFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKG 575 (642)
Q Consensus 496 DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~ 575 (642)
|||.++.+..+ ...+.+||..|||||.+ .+..|+.++||||||+.++|+++|+.||.........
T Consensus 222 DFGVS~~lvnS--------------~a~tfvGT~~YMsPERi-~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~ 286 (364)
T KOG0581|consen 222 DFGVSGILVNS--------------IANTFVGTSAYMSPERI-SGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLD 286 (364)
T ss_pred cccccHHhhhh--------------hcccccccccccChhhh-cCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCC
Confidence 99999877543 11256899999999984 4589999999999999999999999999876444556
Q ss_pred HHHHHHHHHhccCC-Cccc-cChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 576 LESLVRKAFRERRP-LSEV-IDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 576 l~~~~~~~~~~~~~-~~~~-~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
..+.+..+..+..| +++- +++++. +++-.|+++||.+||+++|+++
T Consensus 287 ~~~Ll~~Iv~~ppP~lP~~~fS~ef~-------------~FV~~CL~Kdp~~R~s~~qLl~ 334 (364)
T KOG0581|consen 287 IFELLCAIVDEPPPRLPEGEFSPEFR-------------SFVSCCLRKDPSERPSAKQLLQ 334 (364)
T ss_pred HHHHHHHHhcCCCCCCCcccCCHHHH-------------HHHHHHhcCCcccCCCHHHHhc
Confidence 77777777764433 3332 555444 4666699999999999999875
No 4
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-47 Score=392.97 Aligned_cols=252 Identities=31% Similarity=0.444 Sum_probs=203.6
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCcc-ccHHHHHHHHHHHhcccCCCeeeEEEEEEeCC-ceEEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT-WRFKDFESEVEAIARVQHPNIVRLKAFYYAND-EKLLIS 424 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~-~~~lv~ 424 (642)
...+|+|+||+||++.+... ..||||++...+.. ...++|.+|+.+|.+++|||||+++|+|.+.. ...+||
T Consensus 46 ~~~iG~G~~g~V~~~~~~g~------~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVt 119 (362)
T KOG0192|consen 46 EEVLGSGSFGTVYKGKWRGT------DVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVT 119 (362)
T ss_pred hhhcccCCceeEEEEEeCCc------eeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEE
Confidence 34499999999999998875 45999999875322 22579999999999999999999999999987 799999
Q ss_pred eeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC-ceecCCCCCCeeeCCCC-CeEEeccccccc
Q 006522 425 DFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRK-YVHGNIKSTKILLDDEL-HPCISGFGLNRL 502 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~-iiHrDlkp~NILl~~~~-~~kl~DfGla~~ 502 (642)
|||++|+|+++++.... ..+++..+++|+.|||+||.|||+ .+ ||||||||+|||++.++ ++||+|||+++.
T Consensus 120 Ey~~~GsL~~~l~~~~~---~~l~~~~~l~~aldiArGm~YLH~---~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~ 193 (362)
T KOG0192|consen 120 EYMPGGSLSVLLHKKRK---RKLPLKVRLRIALDIARGMEYLHS---EGPIIHRDLKSDNILVDLKGKTLKIADFGLSRE 193 (362)
T ss_pred EeCCCCcHHHHHhhccc---CCCCHHHHHHHHHHHHHHHHHHhc---CCCeeecccChhhEEEcCCCCEEEECCCcccee
Confidence 99999999999987411 359999999999999999999999 56 99999999999999997 999999999987
Q ss_pred CCCCCcccccceeeecCCCcccccCCCcccCcccccc-CCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHH
Q 006522 503 LPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIY-GSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVR 581 (642)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~ 581 (642)
..... .......||+.|||||++.. ...|+.|+|||||||+||||+||+.||.+... .+.+.
T Consensus 194 ~~~~~------------~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~-----~~~~~ 256 (362)
T KOG0192|consen 194 KVISK------------TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP-----VQVAS 256 (362)
T ss_pred ecccc------------ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH-----HHHHH
Confidence 64321 01113578999999999653 36799999999999999999999999986433 12222
Q ss_pred HH-HhccC-CCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhhh
Q 006522 582 KA-FRERR-PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 640 (642)
Q Consensus 582 ~~-~~~~~-~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l~ 640 (642)
.. ....+ .++....+. +..++.+||+.||+.||++.|++..|+.+.
T Consensus 257 ~v~~~~~Rp~~p~~~~~~-------------l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~ 304 (362)
T KOG0192|consen 257 AVVVGGLRPPIPKECPPH-------------LSSLMERCWLVDPSRRPSFLEIVSRLESIM 304 (362)
T ss_pred HHHhcCCCCCCCccCCHH-------------HHHHHHHhCCCCCCcCCCHHHHHHHHHHHH
Confidence 22 22222 223333333 345777799999999999999999999875
No 5
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.1e-48 Score=377.32 Aligned_cols=250 Identities=22% Similarity=0.351 Sum_probs=203.0
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccc------cHHHHHHHHHHHhcccCCCeeeEEEEEEeCCc
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATW------RFKDFESEVEAIARVQHPNIVRLKAFYYANDE 419 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~------~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~ 419 (642)
..+.+|+|+||.|-+|+.++++ +.||||++.+..... ......+|+++|++++|||||+++++|...+.
T Consensus 176 i~~~LGsGafg~Vkla~e~~tg-----k~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds 250 (475)
T KOG0615|consen 176 ISKTLGSGAFGLVKLAYEKKTG-----KQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDS 250 (475)
T ss_pred eeeeecCCceeEEEEEEEcccC-----cEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCc
Confidence 4678999999999999998887 999999998752211 22345799999999999999999999999999
Q ss_pred eEEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCC---CCeEEec
Q 006522 420 KLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDE---LHPCISG 496 (642)
Q Consensus 420 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~---~~~kl~D 496 (642)
.|||||||+||+|.+.+-.++. +.+.....+++|++.|+.|||+ ++|+||||||+|||+..+ ..+||+|
T Consensus 251 ~YmVlE~v~GGeLfd~vv~nk~-----l~ed~~K~~f~Qll~avkYLH~---~GI~HRDiKPeNILl~~~~e~~llKItD 322 (475)
T KOG0615|consen 251 SYMVLEYVEGGELFDKVVANKY-----LREDLGKLLFKQLLTAVKYLHS---QGIIHRDIKPENILLSNDAEDCLLKITD 322 (475)
T ss_pred eEEEEEEecCccHHHHHHhccc-----cccchhHHHHHHHHHHHHHHHH---cCcccccCCcceEEeccCCcceEEEecc
Confidence 9999999999999999987764 7778889999999999999999 899999999999999655 8899999
Q ss_pred ccccccCCCCCcccccceeeecCCCcccccCCCcccCccccccCC--CCCcccchHHHHHHHHHHHhCCCCCCCCCCCcc
Q 006522 497 FGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGS--KFTQKCDVYSFGIVLLEILTGRLPDAGPENDGK 574 (642)
Q Consensus 497 fGla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~ 574 (642)
||+|+...... ...+.|||+.|.|||++..++ .+..+.|+||+|||||-+++|.+||.+...+.
T Consensus 323 FGlAK~~g~~s-------------fm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~- 388 (475)
T KOG0615|consen 323 FGLAKVSGEGS-------------FMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDP- 388 (475)
T ss_pred cchhhccccce-------------ehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCc-
Confidence 99999865332 123679999999999966532 23458899999999999999999998754432
Q ss_pred cHHHHHHHHHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 575 GLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 575 ~l~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
...+++.+++.++....+.+ -..+..+++.++|..||++|||+.|+++
T Consensus 389 ---sl~eQI~~G~y~f~p~~w~~---------Iseea~dlI~~mL~VdP~~R~s~~eaL~ 436 (475)
T KOG0615|consen 389 ---SLKEQILKGRYAFGPLQWDR---------ISEEALDLINWMLVVDPENRPSADEALN 436 (475)
T ss_pred ---cHHHHHhcCcccccChhhhh---------hhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence 23344444444433222222 2235677999999999999999999875
No 6
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-47 Score=387.50 Aligned_cols=254 Identities=28% Similarity=0.472 Sum_probs=207.1
Q ss_pred hcccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEE
Q 006522 345 ASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (642)
Q Consensus 345 ~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 424 (642)
...+.||+|-||.|+.|.+... ..||+|.++...... ++|.+|+++|++|+|+|||+++|+|...+.+||||
T Consensus 209 ~l~~~LG~G~FG~V~~g~~~~~------~~vavk~ik~~~m~~--~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVt 280 (468)
T KOG0197|consen 209 KLIRELGSGQFGEVWLGKWNGS------TKVAVKTIKEGSMSP--EAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVT 280 (468)
T ss_pred HHHHHhcCCccceEEEEEEcCC------CcccceEEeccccCh--hHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEE
Confidence 3467899999999999999887 689999998764333 88999999999999999999999999988999999
Q ss_pred eeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCC
Q 006522 425 DFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLP 504 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 504 (642)
|||+.|+|.++|+...+ ..+.-.+.+.++.|||+||+||++ +++|||||.++|||++++..+||+|||+||...
T Consensus 281 E~m~~GsLl~yLr~~~~---~~l~~~~Ll~~a~qIaeGM~YLes---~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~ 354 (468)
T KOG0197|consen 281 EYMPKGSLLDYLRTREG---GLLNLPQLLDFAAQIAEGMAYLES---KNYIHRDLAARNILVDEDLVVKISDFGLARLIG 354 (468)
T ss_pred EecccCcHHHHhhhcCC---CccchHHHHHHHHHHHHHHHHHHh---CCccchhhhhhheeeccCceEEEcccccccccC
Confidence 99999999999997333 248889999999999999999999 899999999999999999999999999999554
Q ss_pred CCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHH
Q 006522 505 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKA 583 (642)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~~l~~~~~~~ 583 (642)
++.+... . ...-+..|.|||.+.. +.++.|||||||||+||||+| |+.||...... ...+.+.+.
T Consensus 355 d~~Y~~~------~-----~~kfPIkWtAPEa~~~-~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~--ev~~~le~G 420 (468)
T KOG0197|consen 355 DDEYTAS------E-----GGKFPIKWTAPEALNY-GKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNE--EVLELLERG 420 (468)
T ss_pred CCceeec------C-----CCCCCceecCHHHHhh-CCcccccceeehhhhHHHHhccCCCCCCCCCHH--HHHHHHhcc
Confidence 4322111 1 1223456999999665 789999999999999999999 99998764432 233333333
Q ss_pred HhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhhhc
Q 006522 584 FRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 641 (642)
Q Consensus 584 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l~~ 641 (642)
++-.+| +.+ ...++++|..||+.+|++|||++.+...|+.+..
T Consensus 421 yRlp~P--~~C-------------P~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~ 463 (468)
T KOG0197|consen 421 YRLPRP--EGC-------------PDEVYELMKSCWHEDPEDRPTFETLREVLEDFFT 463 (468)
T ss_pred CcCCCC--CCC-------------CHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhh
Confidence 332222 222 2345678999999999999999999999998754
No 7
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=3.8e-47 Score=405.25 Aligned_cols=263 Identities=27% Similarity=0.435 Sum_probs=218.1
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEe
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
..+.||+|+||.||+|......-......||||.+++..+.....+|+||+++|+.++|||||+++|.|..++..++|+|
T Consensus 490 ~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~MvFE 569 (774)
T KOG1026|consen 490 FKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCMVFE 569 (774)
T ss_pred ehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEEEEE
Confidence 45789999999999999887765566689999999988766566999999999999999999999999999999999999
Q ss_pred eccCCcHHHHHhcCCCCC---------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEec
Q 006522 426 FIRNGSLYAALHAGPSDS---------LPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISG 496 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~---------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~D 496 (642)
||..|||.++|+.+.... ..+|+..+.+.||.|||.||+||-+ +.+|||||..+|+|+.++..+||+|
T Consensus 570 Ym~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~---~~FVHRDLATRNCLVge~l~VKIsD 646 (774)
T KOG1026|consen 570 YMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSS---HHFVHRDLATRNCLVGENLVVKISD 646 (774)
T ss_pred ecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CcccccchhhhhceeccceEEEecc
Confidence 999999999997654221 3459999999999999999999999 8999999999999999999999999
Q ss_pred ccccccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCccc
Q 006522 497 FGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKG 575 (642)
Q Consensus 497 fGla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~~ 575 (642)
||++|.+-..+++..... ..-..+||+||.+.. ++||++||||||||+|||++| |+.||.+..+++
T Consensus 647 fGLsRdiYssDYYk~~~~----------t~lPIRWMppEsIly-~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~E-- 713 (774)
T KOG1026|consen 647 FGLSRDIYSSDYYKVRGN----------TLLPIRWMPPESILY-GKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQE-- 713 (774)
T ss_pred cccchhhhhhhhhcccCC----------ceeeeecCCHHHhhc-CcccchhhhhhhhhhhhhhhccccCcccccchHH--
Confidence 999998766655543321 122456999999776 899999999999999999998 999998765532
Q ss_pred HHHHHHHHHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhh
Q 006522 576 LESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 639 (642)
Q Consensus 576 l~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l 639 (642)
+-...+.+.-+. ..+.+-.++++||+.||+..|++||+++||-.+|+..
T Consensus 714 ----VIe~i~~g~lL~-----------~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~ 762 (774)
T KOG1026|consen 714 ----VIECIRAGQLLS-----------CPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAW 762 (774)
T ss_pred ----HHHHHHcCCccc-----------CCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHH
Confidence 222222222111 1123345678899999999999999999999999876
No 8
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=8.1e-47 Score=370.23 Aligned_cols=193 Identities=26% Similarity=0.409 Sum_probs=173.2
Q ss_pred ccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC-ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEeec
Q 006522 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFI 427 (642)
Q Consensus 349 ~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~ 427 (642)
.||+|+|++||+|+++..+ ..||||.+.+.. .....+....|+.+|+.++|||||+++++++.++..|||||||
T Consensus 17 ~iG~GsfavVykg~h~~~~-----~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVMEyC 91 (429)
T KOG0595|consen 17 EIGSGSFAVVYKGRHKKSG-----TEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVMEYC 91 (429)
T ss_pred hccCcceEEEEEeEeccCC-----ceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEEeC
Confidence 3999999999999999886 899999998763 3344577899999999999999999999999999999999999
Q ss_pred cCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCC------CCeEEecccccc
Q 006522 428 RNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDE------LHPCISGFGLNR 501 (642)
Q Consensus 428 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~------~~~kl~DfGla~ 501 (642)
.||||.++++.++. +++.....++.|+|.||++||+ ++||||||||.||||+.. -.+||+|||+||
T Consensus 92 ~gGDLs~yi~~~~~-----l~e~t~r~Fm~QLA~alq~L~~---~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR 163 (429)
T KOG0595|consen 92 NGGDLSDYIRRRGR-----LPEATARHFMQQLASALQFLHE---NNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFAR 163 (429)
T ss_pred CCCCHHHHHHHcCC-----CCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCcceEEeccCCCCCCCceEEecccchhh
Confidence 99999999998763 8999999999999999999999 899999999999999764 568999999999
Q ss_pred cCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCC
Q 006522 502 LLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAG 568 (642)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~ 568 (642)
.+.... ...+.+|++.|||||+... ++|+.|+|+||.|+|+|++++|+.||+.
T Consensus 164 ~L~~~~-------------~a~tlcGSplYMAPEV~~~-~~YdAKADLWSiG~Ilyq~l~g~~Pf~a 216 (429)
T KOG0595|consen 164 FLQPGS-------------MAETLCGSPLYMAPEVIMS-QQYDAKADLWSIGTILYQCLTGKPPFDA 216 (429)
T ss_pred hCCchh-------------HHHHhhCCccccCHHHHHh-ccccchhhHHHHHHHHHHHHhCCCCccc
Confidence 886432 1236799999999999554 8999999999999999999999999985
No 9
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=8.2e-46 Score=380.62 Aligned_cols=245 Identities=21% Similarity=0.320 Sum_probs=210.3
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCC--CccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEE
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG--DATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLI 423 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 423 (642)
.+.+||+|||..+|+++....+ ..||+|++.+. ......+...+||+|.++|+|||||+++++|++.+..|+|
T Consensus 22 ~g~~LGkGgFA~cYe~~~~~tg-----e~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYiv 96 (592)
T KOG0575|consen 22 RGRFLGKGGFARCYEARDLDTG-----EVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIV 96 (592)
T ss_pred eeeeeccCcceEEEEEEEcCCC-----cEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEE
Confidence 4689999999999999995554 89999999874 2333458899999999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccC
Q 006522 424 SDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLL 503 (642)
Q Consensus 424 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 503 (642)
.|+|++|+|.++++..+ ++++.++..+++||+.||.|||+ .+|+|||||..|++|++++++||+|||||..+
T Consensus 97 LELC~~~sL~el~Krrk-----~ltEpEary~l~QIv~GlkYLH~---~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~l 168 (592)
T KOG0575|consen 97 LELCHRGSLMELLKRRK-----PLTEPEARYFLRQIVEGLKYLHS---LGIIHRDLKLGNLFLNENMNVKIGDFGLATQL 168 (592)
T ss_pred EEecCCccHHHHHHhcC-----CCCcHHHHHHHHHHHHHHHHHHh---cCceecccchhheeecCcCcEEecccceeeee
Confidence 99999999999998443 59999999999999999999999 89999999999999999999999999999987
Q ss_pred CCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHH
Q 006522 504 PGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKA 583 (642)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~ 583 (642)
..+.. ...+.||||-|+|||++. ...++..+||||+||+||.|++|++||.. ..+.+....+
T Consensus 169 e~~~E------------rk~TlCGTPNYIAPEVl~-k~gHsfEvDiWSlGcvmYtLL~G~PPFet-----k~vkety~~I 230 (592)
T KOG0575|consen 169 EYDGE------------RKKTLCGTPNYIAPEVLN-KSGHSFEVDIWSLGCVMYTLLVGRPPFET-----KTVKETYNKI 230 (592)
T ss_pred cCccc------------ccceecCCCcccChhHhc-cCCCCCchhhhhhhhHHHhhhhCCCCccc-----chHHHHHHHH
Confidence 64421 223679999999999955 58899999999999999999999999974 4466666666
Q ss_pred HhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 584 FRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 584 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
......++..++.+. .+|+...|+.||.+|||+.+|+.
T Consensus 231 k~~~Y~~P~~ls~~A-------------~dLI~~lL~~~P~~Rpsl~~vL~ 268 (592)
T KOG0575|consen 231 KLNEYSMPSHLSAEA-------------KDLIRKLLRPNPSERPSLDEVLD 268 (592)
T ss_pred HhcCcccccccCHHH-------------HHHHHHHhcCCcccCCCHHHHhc
Confidence 666666666555443 34777799999999999999985
No 10
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-45 Score=356.30 Aligned_cols=238 Identities=21% Similarity=0.332 Sum_probs=202.2
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC--ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEE
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLI 423 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 423 (642)
.-++||+|+||.||.++..+.+ +.+|+|.+++.. .....+....|..+|.+++||.||+++..|++.+..|+|
T Consensus 29 ~lkviGkG~fGkV~~Vrk~dt~-----kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 29 ILKVIGKGSFGKVFQVRKKDTG-----KIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred eeeeeeccCCceEEEEEEcccC-----ceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence 3578999999999999998776 899999998762 223357788999999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccC
Q 006522 424 SDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLL 503 (642)
Q Consensus 424 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 503 (642)
+||+.||.|+.+|.+.+. +++..+..++.+|+.||.|||+ .+||||||||+|||||++|+++|+|||+++..
T Consensus 104 ld~~~GGeLf~hL~~eg~-----F~E~~arfYlaEi~lAL~~LH~---~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~ 175 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQREGR-----FSEDRARFYLAEIVLALGYLHS---KGIIYRDLKPENILLDEQGHIKLTDFGLCKED 175 (357)
T ss_pred EeccCCccHHHHHHhcCC-----cchhHHHHHHHHHHHHHHHHHh---CCeeeccCCHHHeeecCCCcEEEeccccchhc
Confidence 999999999999987654 8899999999999999999999 89999999999999999999999999999865
Q ss_pred CCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHH
Q 006522 504 PGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKA 583 (642)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~ 583 (642)
.... ..+...+||+.|||||++.. ..|+..+|.||+||++|||+||.+||.. .+...+.+..
T Consensus 176 ~~~~------------~~t~tfcGT~eYmAPEil~~-~gy~~~vDWWsLGillYeML~G~pPF~~-----~~~~~~~~~I 237 (357)
T KOG0598|consen 176 LKDG------------DATRTFCGTPEYMAPEILLG-KGYDKAVDWWSLGILLYEMLTGKPPFYA-----EDVKKMYDKI 237 (357)
T ss_pred ccCC------------CccccccCCccccChHHHhc-CCCCcccchHhHHHHHHHHhhCCCCCcC-----ccHHHHHHHH
Confidence 4332 12335799999999999665 7999999999999999999999999985 3456677777
Q ss_pred Hhcc-CCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCC
Q 006522 584 FRER-RPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRP 627 (642)
Q Consensus 584 ~~~~-~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP 627 (642)
...+ ...+..++++..+ ++.+.++.||++|.
T Consensus 238 ~~~k~~~~p~~ls~~ard-------------ll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 238 LKGKLPLPPGYLSEEARD-------------LLKKLLKRDPRQRL 269 (357)
T ss_pred hcCcCCCCCccCCHHHHH-------------HHHHHhccCHHHhc
Confidence 7766 3333445655443 56669999999996
No 11
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9.5e-46 Score=344.56 Aligned_cols=254 Identities=24% Similarity=0.340 Sum_probs=202.6
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCC-CccccHHHHHHHHHHHhcccCCCeeeEEE-EEEeCCc-eEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG-DATWRFKDFESEVEAIARVQHPNIVRLKA-FYYANDE-KLLI 423 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~H~nIv~l~~-~~~~~~~-~~lv 423 (642)
...||+|.||.|||+....++ +.||.|.+.-. .+.....+...|+.+|++++|||||++++ .+..+.+ .++|
T Consensus 24 l~~IG~GsFg~vykv~~~~~g-----~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv 98 (375)
T KOG0591|consen 24 LKKIGRGSFGEVYKVQCLLDG-----KLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV 98 (375)
T ss_pred HHHHcCCcchheEEeeeccCc-----chhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence 467999999999999987776 89999998744 23334477899999999999999999998 4444455 8999
Q ss_pred EeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CceecCCCCCCeeeCCCCCeEEeccccccc
Q 006522 424 SDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPR-KYVHGNIKSTKILLDDELHPCISGFGLNRL 502 (642)
Q Consensus 424 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~-~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 502 (642)
||||..|||.+.++..+... ..+++..+++++.|++.||.++|+..++ -|+||||||.||+|+.+|.+|++|||+++.
T Consensus 99 mE~c~~GDLsqmIk~~K~qk-r~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~ 177 (375)
T KOG0591|consen 99 MELCDAGDLSQMIKHFKKQK-RLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRF 177 (375)
T ss_pred HHhhcccCHHHHHHHHHhcc-ccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhH
Confidence 99999999999997544332 3599999999999999999999995532 389999999999999999999999999998
Q ss_pred CCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHH
Q 006522 503 LPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRK 582 (642)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~ 582 (642)
+.... +-..+.+|||.||+||.+. +..|+.||||||+||++|||+.-+.||.+. .+.+.-++
T Consensus 178 l~s~~------------tfA~S~VGTPyYMSPE~i~-~~~Y~~kSDiWslGCllyEMcaL~~PF~g~-----n~~~L~~K 239 (375)
T KOG0591|consen 178 LSSKT------------TFAHSLVGTPYYMSPERIH-ESGYNFKSDIWSLGCLLYEMCALQSPFYGD-----NLLSLCKK 239 (375)
T ss_pred hcchh------------HHHHhhcCCCcccCHHHHh-cCCCCcchhHHHHHHHHHHHHhcCCCcccc-----cHHHHHHH
Confidence 86542 1123678999999999854 589999999999999999999999999853 56666666
Q ss_pred HHhccCC-Cc-cccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHH
Q 006522 583 AFRERRP-LS-EVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 637 (642)
Q Consensus 583 ~~~~~~~-~~-~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~ 637 (642)
+.+...+ ++ +..+ ..+-+++..|+..||+.||+.-.++..+.
T Consensus 240 I~qgd~~~~p~~~YS-------------~~l~~li~~ci~vd~~~RP~t~~~v~di~ 283 (375)
T KOG0591|consen 240 IEQGDYPPLPDEHYS-------------TDLRELINMCIAVDPEQRPDTVPYVQDIQ 283 (375)
T ss_pred HHcCCCCCCcHHHhh-------------hHHHHHHHHHccCCcccCCCcchHHHHHH
Confidence 6655432 22 2222 23445777799999999998544444443
No 12
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-45 Score=385.51 Aligned_cols=260 Identities=27% Similarity=0.442 Sum_probs=216.6
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEe
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
..++||.|-||.||+|.++..+... ..||||.++......+..+|+.|+.||.+++||||++|.|........++|.|
T Consensus 633 Ie~VIGaGEFGEVc~GrLk~pgkre--~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiTE 710 (996)
T KOG0196|consen 633 IEKVIGAGEFGEVCSGRLKLPGKRE--ITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIITE 710 (996)
T ss_pred EEEEEecccccceecccccCCCCcc--eeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEhh
Confidence 3589999999999999998765333 78999999998777777999999999999999999999999999999999999
Q ss_pred eccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCC
Q 006522 426 FIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPG 505 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 505 (642)
||+||+|+.+|+.+.. .|++.+...+.++||.||.||-+ .++|||||..+|||++.+..+||+|||++|.+.+
T Consensus 711 yMENGsLDsFLR~~DG----qftviQLVgMLrGIAsGMkYLsd---m~YVHRDLAARNILVNsnLvCKVsDFGLSRvled 783 (996)
T KOG0196|consen 711 YMENGSLDSFLRQNDG----QFTVIQLVGMLRGIASGMKYLSD---MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLED 783 (996)
T ss_pred hhhCCcHHHHHhhcCC----ceEeehHHHHHHHHHHHhHHHhh---cCchhhhhhhhheeeccceEEEeccccceeeccc
Confidence 9999999999998764 39999999999999999999999 8999999999999999999999999999998876
Q ss_pred CCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHHH
Q 006522 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAF 584 (642)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~~l~~~~~~~~ 584 (642)
+.....+ +.......+|.|||.+.. +++|.+||||||||||||.++ |+.||.++.++ +... ..
T Consensus 784 d~~~~yt---------t~GGKIPiRWTAPEAIa~-RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQ--dVIk----aI 847 (996)
T KOG0196|consen 784 DPEAAYT---------TLGGKIPIRWTAPEAIAY-RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ--DVIK----AI 847 (996)
T ss_pred CCCcccc---------ccCCccceeecChhHhhh-cccCchhhccccceEEEEecccCCCcccccchH--HHHH----HH
Confidence 6421110 111233567999999665 899999999999999999987 99999876553 2223 33
Q ss_pred hccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhhhc
Q 006522 585 RERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 641 (642)
Q Consensus 585 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l~~ 641 (642)
.+...++...| +...+.+||+.||++|-.+||++.+++..|+++-.
T Consensus 848 e~gyRLPpPmD-----------CP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIr 893 (996)
T KOG0196|consen 848 EQGYRLPPPMD-----------CPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIR 893 (996)
T ss_pred HhccCCCCCCC-----------CcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhc
Confidence 33333333222 33456779999999999999999999999999843
No 13
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.6e-44 Score=354.49 Aligned_cols=259 Identities=19% Similarity=0.265 Sum_probs=204.8
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhccc-CCCeeeEEEEEEeCC-ceEEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ-HPNIVRLKAFYYAND-EKLLIS 424 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~-~~~lv~ 424 (642)
.+.||.|.||.||+|+....+ ..||||++++.-..+..-.=+||+..|++++ |||||++.+.+.+.+ ..|+||
T Consensus 15 i~klGDGTfGsV~la~~~~~~-----~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fVf 89 (538)
T KOG0661|consen 15 IRKLGDGTFGSVYLAKSKETG-----ELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVF 89 (538)
T ss_pred HHHhcCCcceeEEEeeecCCC-----ceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeeeH
Confidence 467999999999999988876 7899999988744432223368999999998 999999999999988 999999
Q ss_pred eeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCC
Q 006522 425 DFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLP 504 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 504 (642)
|||+. +|+++++++. .+|++..+..|+.||++||+|+|. +|++|||+||+|||+.....+||+|||+||.+.
T Consensus 90 E~Md~-NLYqLmK~R~----r~fse~~irnim~QilqGL~hiHk---~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~ 161 (538)
T KOG0661|consen 90 EFMDC-NLYQLMKDRN----RLFSESDIRNIMYQILQGLAHIHK---HGFFHRDLKPENILISGNDVIKIADFGLAREVR 161 (538)
T ss_pred Hhhhh-hHHHHHhhcC----CcCCHHHHHHHHHHHHHHHHHHHh---cCcccccCChhheEecccceeEecccccccccc
Confidence 99987 9999998874 369999999999999999999999 899999999999999999999999999999876
Q ss_pred CCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHH
Q 006522 505 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAF 584 (642)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~ 584 (642)
... ..+..+.|.+|+|||+++..+.|+.+.||||+|||++|+++-++-|.+...- +.+.++....-
T Consensus 162 Skp-------------PYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~-Dqi~KIc~VLG 227 (538)
T KOG0661|consen 162 SKP-------------PYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEI-DQIYKICEVLG 227 (538)
T ss_pred cCC-------------CcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHH-HHHHHHHHHhC
Confidence 442 2235677889999999998899999999999999999999999888874331 11222211110
Q ss_pred hc---------------cCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 585 RE---------------RRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 585 ~~---------------~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
.. ...++....-.+...+. ....++++++.+|+.+||.+|||+.|+++
T Consensus 228 tP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p--~~s~~~~~li~~ll~WDP~kRpTA~~al~ 290 (538)
T KOG0661|consen 228 TPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLP--NASSEAASLIERLLAWDPDKRPTASQALQ 290 (538)
T ss_pred CCccccchhHHHHHHHhccCCCcCCCCChHHhCc--ccCHHHHHHHHHHhcCCCccCccHHHHhc
Confidence 00 00111111111111111 14567788999999999999999999886
No 14
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=8.4e-43 Score=349.58 Aligned_cols=257 Identities=20% Similarity=0.286 Sum_probs=203.0
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC-ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeC--CceEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN--DEKLLI 423 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~lv 423 (642)
-..||+|.||.||+++...++ +.||+|+++... ......-..|||.||++|+|||||+|.+...+. ..+|||
T Consensus 122 i~kIGeGTyg~VYkAr~~~tg-----kivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlV 196 (560)
T KOG0600|consen 122 IEKIGEGTYGQVYKARDLETG-----KIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLV 196 (560)
T ss_pred HHHhcCcchhheeEeeecccC-----cEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEE
Confidence 357999999999999998876 899999998653 333345668999999999999999999999887 589999
Q ss_pred EeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccC
Q 006522 424 SDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLL 503 (642)
Q Consensus 424 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 503 (642)
+|||++ ||..++..... .|++.++..+++|++.||+|+|+ ++|+|||||.+|||||.+|.+||+|||||+++
T Consensus 197 FeYMdh-DL~GLl~~p~v----kft~~qIKc~mkQLl~Gl~~cH~---~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y 268 (560)
T KOG0600|consen 197 FEYMDH-DLSGLLSSPGV----KFTEPQIKCYMKQLLEGLEYCHS---RGVLHRDIKGSNILIDNNGVLKIADFGLARFY 268 (560)
T ss_pred Eecccc-hhhhhhcCCCc----ccChHHHHHHHHHHHHHHHHHhh---cCeeeccccccceEEcCCCCEEeccccceeec
Confidence 999988 99999876543 49999999999999999999999 89999999999999999999999999999987
Q ss_pred CCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHH
Q 006522 504 PGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKA 583 (642)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~ 583 (642)
...... ..+..+.|.+|+|||.+++...|+.+.|+||.||||.||++|++.|.+... .+.+..+
T Consensus 269 ~~~~~~-----------~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tE-----veQl~kI 332 (560)
T KOG0600|consen 269 TPSGSA-----------PYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTE-----VEQLHKI 332 (560)
T ss_pred cCCCCc-----------ccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccH-----HHHHHHH
Confidence 655321 123557789999999989888999999999999999999999999986432 2222323
Q ss_pred HhccCCCccccCh------------------hhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 584 FRERRPLSEVIDP------------------ALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 584 ~~~~~~~~~~~d~------------------~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
+.......+...+ .+.+.. ..-....++|+-.+|..||.+|.|+.++++
T Consensus 333 fklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~--~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 333 FKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETF--KDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred HHHhCCCChhccccccCCcccccCCCCcccchHHHHh--ccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 2221111111111 111100 011245678888999999999999998874
No 15
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=1.9e-43 Score=332.50 Aligned_cols=258 Identities=19% Similarity=0.308 Sum_probs=201.2
Q ss_pred cccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccH-HHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRF-KDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 348 ~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~-~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
..+|+|+||+|||++.++++ +.||||++.+..+...+ +-.+||+++|++++|+|+|.+++.|......+||+||
T Consensus 8 gkvGEGSYGvV~KCrnk~Tg-----qIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~ 82 (396)
T KOG0593|consen 8 GKVGEGSYGVVMKCRNKDTG-----QIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEY 82 (396)
T ss_pred hccccCcceEEEEeccCCcc-----cEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeee
Confidence 46899999999999999887 99999999887554333 5578999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCC
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 506 (642)
|+. ++.+-|..... .++.....+++.|+++|+.|+|+ +++|||||||+|||++.++.+|+||||+|+.+...
T Consensus 83 ~dh-TvL~eLe~~p~----G~~~~~vk~~l~Q~l~ai~~cHk---~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~p 154 (396)
T KOG0593|consen 83 CDH-TVLHELERYPN----GVPSELVKKYLYQLLKAIHFCHK---NNCIHRDIKPENILITQNGVVKLCDFGFARTLSAP 154 (396)
T ss_pred cch-HHHHHHHhccC----CCCHHHHHHHHHHHHHHhhhhhh---cCeecccCChhheEEecCCcEEeccchhhHhhcCC
Confidence 988 66566655443 38889999999999999999999 89999999999999999999999999999988643
Q ss_pred CcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHH-----
Q 006522 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVR----- 581 (642)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~----- 581 (642)
.. ..+..+.|.+|+|||.+.+..+|+..+||||.||++.||+||.+-|.+...- +....++
T Consensus 155 gd------------~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDi--DQLy~I~ktLG~ 220 (396)
T KOG0593|consen 155 GD------------NYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDI--DQLYLIRKTLGN 220 (396)
T ss_pred cc------------hhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchH--HHHHHHHHHHcc
Confidence 21 2235577889999999888789999999999999999999999888764331 1111222
Q ss_pred ------HHHhccCCC-----ccccChhhhh-chhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 582 ------KAFRERRPL-----SEVIDPALVK-EIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 582 ------~~~~~~~~~-----~~~~d~~l~~-~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
..+...+-+ ++.-+++-.+ ... .-..-+++++..|++.||++|++-+|++.
T Consensus 221 L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p--~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 221 LIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYP--KISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred cCHHHHHHhccCCceeeeecCCCCCccchhhhcc--cchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 222222111 1111111110 011 11235678999999999999999988874
No 16
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=7.6e-43 Score=352.66 Aligned_cols=257 Identities=19% Similarity=0.243 Sum_probs=209.3
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC--ccccHHHHHHHHHHHhcc-cCCCeeeEEEEEEeCCceEE
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLL 422 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~l 422 (642)
++.+||+|+|++|++|+....+ +.+|||++.+.. ....++.+.+|-.+|.+| .||.||+|+-.|++....|+
T Consensus 77 Fg~~lGeGSYStV~~A~~~~t~-----keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYF 151 (604)
T KOG0592|consen 77 FGKILGEGSYSTVVLAREKATG-----KEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYF 151 (604)
T ss_pred hhheeccccceeEEEeeecCCC-----ceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEE
Confidence 5788999999999999998876 899999997752 223346678899999999 89999999999999999999
Q ss_pred EEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEeccccccc
Q 006522 423 ISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRL 502 (642)
Q Consensus 423 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 502 (642)
|+||+++|+|.++|+..+. |++.....++.||+.||+|||+ .+||||||||+|||||+||++||+|||.|+.
T Consensus 152 vLe~A~nGdll~~i~K~Gs-----fde~caR~YAAeIldAleylH~---~GIIHRDlKPENILLd~dmhikITDFGsAK~ 223 (604)
T KOG0592|consen 152 VLEYAPNGDLLDLIKKYGS-----FDETCARFYAAEILDALEYLHS---NGIIHRDLKPENILLDKDGHIKITDFGSAKI 223 (604)
T ss_pred EEEecCCCcHHHHHHHhCc-----chHHHHHHHHHHHHHHHHHHHh---cCceeccCChhheeEcCCCcEEEeecccccc
Confidence 9999999999999998764 8999999999999999999999 8999999999999999999999999999999
Q ss_pred CCCCCcccccceee-ecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHH
Q 006522 503 LPGTSKVTKNETIV-TSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVR 581 (642)
Q Consensus 503 ~~~~~~~~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~ 581 (642)
+............. .........+||..|.+||++. ....+..+|+|+|||+||.|+.|++||.+... ...++
T Consensus 224 l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~-~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ne-----yliFq 297 (604)
T KOG0592|consen 224 LSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLN-DSPAGPSSDLWALGCILYQMLAGQPPFRAANE-----YLIFQ 297 (604)
T ss_pred CChhhccccCccCcccccCcccceeeeecccCHHHhc-CCCCCcccchHHHHHHHHHHhcCCCCCccccH-----HHHHH
Confidence 87654321111110 0111124578999999999955 47889999999999999999999999975322 23445
Q ss_pred HHHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 582 KAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 582 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
++..-...+++.+.+... +|+.+.|..||.+|++..++-+
T Consensus 298 kI~~l~y~fp~~fp~~a~-------------dLv~KLLv~dp~~Rlt~~qIk~ 337 (604)
T KOG0592|consen 298 KIQALDYEFPEGFPEDAR-------------DLIKKLLVRDPSDRLTSQQIKA 337 (604)
T ss_pred HHHHhcccCCCCCCHHHH-------------HHHHHHHccCccccccHHHHhh
Confidence 555555566666665443 3666799999999999988754
No 17
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-43 Score=347.49 Aligned_cols=251 Identities=23% Similarity=0.344 Sum_probs=197.6
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCC--ceEEE
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYAND--EKLLI 423 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~--~~~lv 423 (642)
..+.||+|+||.||++...+.+ ...|||.+....... .+.+.+|+.+|++++|||||+++|.....+ ..++.
T Consensus 21 ~~~~lG~Gs~G~V~l~~~~~~g-----~~~AvK~v~~~~~~~-~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~ 94 (313)
T KOG0198|consen 21 KGKLLGRGSFGSVYLATNKKTG-----ELMAVKSVELEDSPT-SESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIF 94 (313)
T ss_pred hhccccCccceEEEEEEecCCC-----cceeeeeeecccchh-HHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEee
Confidence 4678999999999999998853 789999987653322 477899999999999999999999866555 58899
Q ss_pred EeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCC-CCCeEEeccccccc
Q 006522 424 SDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDD-ELHPCISGFGLNRL 502 (642)
Q Consensus 424 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~-~~~~kl~DfGla~~ 502 (642)
|||+++|+|.+++...+. .|++..+.++.+||++||+|||+ ++|+||||||+|||++. ++.+||+|||+++.
T Consensus 95 mEy~~~GsL~~~~~~~g~----~l~E~~v~~ytr~iL~GL~ylHs---~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~ 167 (313)
T KOG0198|consen 95 MEYAPGGSLSDLIKRYGG----KLPEPLVRRYTRQILEGLAYLHS---KGIVHCDIKPANILLDPSNGDVKLADFGLAKK 167 (313)
T ss_pred eeccCCCcHHHHHHHcCC----CCCHHHHHHHHHHHHHHHHHHHh---CCEeccCcccceEEEeCCCCeEEeccCccccc
Confidence 999999999999987653 39999999999999999999999 89999999999999999 79999999999987
Q ss_pred CCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHH
Q 006522 503 LPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRK 582 (642)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~ 582 (642)
...... .........||+.|||||+...+.....++||||+||++.||+||+.||... .....++-.
T Consensus 168 ~~~~~~---------~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~----~~~~~~~~~ 234 (313)
T KOG0198|consen 168 LESKGT---------KSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF----FEEAEALLL 234 (313)
T ss_pred cccccc---------cccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh----cchHHHHHH
Confidence 653110 1111224679999999999654333345999999999999999999999752 112222222
Q ss_pred HHhcc--CCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 006522 583 AFRER--RPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSES 635 (642)
Q Consensus 583 ~~~~~--~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~ 635 (642)
..... +.+++.+++.. .+++.+|++.||++|||+.++++.
T Consensus 235 ig~~~~~P~ip~~ls~~a-------------~~Fl~~C~~~~p~~Rpta~eLL~h 276 (313)
T KOG0198|consen 235 IGREDSLPEIPDSLSDEA-------------KDFLRKCFKRDPEKRPTAEELLEH 276 (313)
T ss_pred HhccCCCCCCCcccCHHH-------------HHHHHHHhhcCcccCcCHHHHhhC
Confidence 22222 23444444433 346777999999999999999864
No 18
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.1e-43 Score=385.02 Aligned_cols=262 Identities=26% Similarity=0.399 Sum_probs=212.7
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEe
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
....||+|.||.||+|...+-.+......||||.+++..+....++|.+|+.+|++++|||||+++|.|.+....++++|
T Consensus 696 l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i~le 775 (1025)
T KOG1095|consen 696 LLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLILLE 775 (1025)
T ss_pred eeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEEEeh
Confidence 46899999999999999987665544678999999987666667999999999999999999999999999999999999
Q ss_pred eccCCcHHHHHhcCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccC
Q 006522 426 FIRNGSLYAALHAGPSDS--LPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLL 503 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 503 (642)
||++|||..+|++.+... ...++-...+.++.|||+|+.||++ +++|||||..+|+||++...+||+|||+|+.+
T Consensus 776 yM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~---~~fvHRDLAaRNCLL~~~r~VKIaDFGlArDi 852 (1025)
T KOG1095|consen 776 YMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLES---KHFVHRDLAARNCLLDERRVVKIADFGLARDI 852 (1025)
T ss_pred hcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHh---CCCcCcchhhhheeecccCcEEEcccchhHhh
Confidence 999999999998863221 2358899999999999999999999 89999999999999999999999999999966
Q ss_pred CCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHH
Q 006522 504 PGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRK 582 (642)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~~l~~~~~~ 582 (642)
....++..... ..-...|||||.+.. +.++.|+|||||||+|||++| |..||.+..+. +....
T Consensus 853 y~~~yyr~~~~----------a~lPvkWm~PEsl~d-~iFtskSDvWsFGVllWEifslG~~PY~~~~n~-----~v~~~ 916 (1025)
T KOG1095|consen 853 YDKDYYRKHGE----------AMLPVKWMPPESLKD-GIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNF-----EVLLD 916 (1025)
T ss_pred hhchheeccCc----------cccceecCCHHHHhh-cccccccchhhhHHHHHHHHhCCCCCCCCcchH-----HHHHH
Confidence 55444332211 012346999999665 889999999999999999999 99999764432 11221
Q ss_pred HHhcc-CCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhh
Q 006522 583 AFRER-RPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 639 (642)
Q Consensus 583 ~~~~~-~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l 639 (642)
...+. -+.+ ..+-..++++|..||+.+|++||++..+++.+..+
T Consensus 917 ~~~ggRL~~P-------------~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i 961 (1025)
T KOG1095|consen 917 VLEGGRLDPP-------------SYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAI 961 (1025)
T ss_pred HHhCCccCCC-------------CCCChHHHHHHHHHccCChhhCccHHHHHhhhhhh
Confidence 22222 1111 12334567899999999999999999999988776
No 19
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=5.8e-43 Score=353.38 Aligned_cols=243 Identities=21% Similarity=0.348 Sum_probs=207.2
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCc-cccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEe
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA-TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
.+.||+|+||.||||+.+.+. +.||+|.+.+... .+..+.+.+|++|+++++|||||.++++|++..+.++|.|
T Consensus 7 ~e~iG~Gsfg~VYKgrrK~t~-----~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 7 YEMIGEGSFGRVYKGRRKYTI-----QVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred HHHhcCCccceeeecccccce-----eEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 357999999999999988776 8999999987643 3345789999999999999999999999999999999999
Q ss_pred eccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCC
Q 006522 426 FIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPG 505 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 505 (642)
|+.| +|+.+|.+.+ .++++.+..|+.++..||.|||+ .+|+|||+||.|||++..+.+|+||||+|+.+..
T Consensus 82 ~a~g-~L~~il~~d~-----~lpEe~v~~~a~~LVsaL~yLhs---~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~ 152 (808)
T KOG0597|consen 82 YAVG-DLFTILEQDG-----KLPEEQVRAIAYDLVSALYYLHS---NRILHRDMKPQNILLEKGGTLKLCDFGLARAMST 152 (808)
T ss_pred hhhh-hHHHHHHhcc-----CCCHHHHHHHHHHHHHHHHHHHh---cCcccccCCcceeeecCCCceeechhhhhhhccc
Confidence 9987 9999998765 39999999999999999999999 8999999999999999999999999999998754
Q ss_pred CCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHh
Q 006522 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR 585 (642)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~ 585 (642)
... ..+.+.|||.|||||+ ..++.|+..+|+||+|||+||+++|++||.. ..+.+.++.+..
T Consensus 153 ~t~------------vltsikGtPlYmAPEl-v~e~pyd~~sDlWslGcilYE~~~G~PPF~a-----~si~~Lv~~I~~ 214 (808)
T KOG0597|consen 153 NTS------------VLTSIKGTPLYMAPEL-VEEQPYDHTSDLWSLGCILYELYVGQPPFYA-----RSITQLVKSILK 214 (808)
T ss_pred Cce------------eeeeccCcccccCHHH-HcCCCccchhhHHHHHHHHHHHhcCCCCchH-----HHHHHHHHHHhc
Confidence 311 1225689999999998 4468999999999999999999999999973 456777887777
Q ss_pred ccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 586 ERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 586 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
++...+...++.+ ..+....+.+||.+|.+-.+++.
T Consensus 215 d~v~~p~~~S~~f-------------~nfl~gLL~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 215 DPVKPPSTASSSF-------------VNFLQGLLIKDPAQRLTWTDLLG 250 (808)
T ss_pred CCCCCcccccHHH-------------HHHHHHHhhcChhhcccHHHHhc
Confidence 6655444444443 34555689999999999888763
No 20
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.8e-42 Score=338.08 Aligned_cols=260 Identities=20% Similarity=0.297 Sum_probs=208.4
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEe
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
...+||.|..++||+|+....+ ..||||++.-.........+.+|+..|+.++||||++++..|..+.+.|+||.
T Consensus 30 L~e~IG~G~sa~V~~A~c~p~~-----e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmp 104 (516)
T KOG0582|consen 30 LQEVIGVGASAVVYLARCIPTN-----EVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMP 104 (516)
T ss_pred EEEEEeccceeEeeeeeecccC-----CEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeeh
Confidence 3578999999999999987765 89999999876555556889999999999999999999999999999999999
Q ss_pred eccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCC
Q 006522 426 FIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPG 505 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 505 (642)
||.+||+.++++..-.. .+++..+..|.+++++||.|||. ++.||||||+.|||||++|.+||+|||.+..+..
T Consensus 105 fMa~GS~ldIik~~~~~---Gl~E~~Ia~iLre~LkaL~YLH~---~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~ 178 (516)
T KOG0582|consen 105 FMAGGSLLDIIKTYYPD---GLEEASIATILREVLKALDYLHQ---NGHIHRDVKAGNILIDSDGTVKLADFGVSASLFD 178 (516)
T ss_pred hhcCCcHHHHHHHHccc---cccHHHHHHHHHHHHHHHHHHHh---cCceecccccccEEEcCCCcEEEcCceeeeeecc
Confidence 99999999999877654 39999999999999999999999 8999999999999999999999999998877665
Q ss_pred CCcccccceeeecCCCcccccCCCcccCccc-cccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHH
Q 006522 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEA-RIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAF 584 (642)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~-~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~ 584 (642)
..... . . .....+||+.|||||+ ......|+.|+||||||++..||++|..||... ..+.......
T Consensus 179 ~G~R~--~----~--rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~----pPmkvLl~tL- 245 (516)
T KOG0582|consen 179 SGDRQ--V----T--RFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKY----PPMKVLLLTL- 245 (516)
T ss_pred cCcee--e----E--eeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccC----ChHHHHHHHh-
Confidence 43110 0 1 1135689999999998 334467999999999999999999999999742 2233333333
Q ss_pred hccCCCcc--ccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 585 RERRPLSE--VIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 585 ~~~~~~~~--~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
+..++... ..+.+- ....-..+.+++-.|++.||++|||+.++++
T Consensus 246 qn~pp~~~t~~~~~d~-----~k~~~ksf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 246 QNDPPTLLTSGLDKDE-----DKKFSKSFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred cCCCCCcccccCChHH-----hhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 33332122 112111 1122236677888899999999999999875
No 21
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=1.5e-41 Score=354.57 Aligned_cols=265 Identities=25% Similarity=0.352 Sum_probs=200.5
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcc-cCCCeeeEEEEEEeCC-ceEEE
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYAND-EKLLI 423 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~-~~~lv 423 (642)
..+.||+|+||.||+|.............||||+++........+.+.+|+.++.++ +|||||+++++|...+ ..++|
T Consensus 11 ~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv 90 (338)
T cd05102 11 LGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGPLMVI 90 (338)
T ss_pred eeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCceEEE
Confidence 357899999999999986432222233689999997654333446799999999999 8999999999987654 57899
Q ss_pred EeeccCCcHHHHHhcCCCC---------------------------------------------------------CCCC
Q 006522 424 SDFIRNGSLYAALHAGPSD---------------------------------------------------------SLPP 446 (642)
Q Consensus 424 ~e~~~~gsL~~~l~~~~~~---------------------------------------------------------~~~~ 446 (642)
|||+++|+|.+++...... ...+
T Consensus 91 ~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (338)
T cd05102 91 VEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLWKSP 170 (338)
T ss_pred EecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccccccCC
Confidence 9999999999999753210 0135
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCCCcccccceeeecCCCccccc
Q 006522 447 LPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISA 526 (642)
Q Consensus 447 l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (642)
+++..+..++.||++||+|||+ .+|+||||||+|||+++++.+||+|||+++......... ......
T Consensus 171 l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~----------~~~~~~ 237 (338)
T cd05102 171 LTMEDLICYSFQVARGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYV----------RKGSAR 237 (338)
T ss_pred CCHHHHHHHHHHHHHHHHHHHH---CCEECCCCccceEEEcCCCcEEEeecccccccccCcchh----------cccCCC
Confidence 8899999999999999999999 899999999999999999999999999998654321110 011234
Q ss_pred CCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHHHhccC-CCccccChhhhhchhH
Q 006522 527 ISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERR-PLSEVIDPALVKEIHA 604 (642)
Q Consensus 527 gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~d~~l~~~~~~ 604 (642)
++..|+|||++. +..++.++|||||||++|||+| |+.||.+..... .+......... ..+...+
T Consensus 238 ~~~~y~aPE~~~-~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~----~~~~~~~~~~~~~~~~~~~--------- 303 (338)
T cd05102 238 LPLKWMAPESIF-DKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINE----EFCQRLKDGTRMRAPENAT--------- 303 (338)
T ss_pred CCccccCcHHhh-cCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccH----HHHHHHhcCCCCCCCCCCC---------
Confidence 567799999854 4678999999999999999997 999997543221 11121111111 1111112
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhhhc
Q 006522 605 KRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 641 (642)
Q Consensus 605 ~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l~~ 641 (642)
..+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 304 ----~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 304 ----PEIYRIMLACWQGDPKERPTFSALVEILGDLLQ 336 (338)
T ss_pred ----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 235678999999999999999999999998854
No 22
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-41 Score=350.70 Aligned_cols=245 Identities=22% Similarity=0.306 Sum_probs=203.5
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCC----CccccHHHHHHHHHHHhccc-CCCeeeEEEEEEeCCce
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG----DATWRFKDFESEVEAIARVQ-HPNIVRLKAFYYANDEK 420 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~ 420 (642)
....||+|+||.|+.+.....+ ..||+|.+... ......+.+.+|+.++++++ ||||+++++++......
T Consensus 21 ~~~~lG~GsfgkV~~a~~~~t~-----~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~ 95 (370)
T KOG0583|consen 21 LGRTLGSGSFGKVKLAKHRLTG-----EKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTKI 95 (370)
T ss_pred eeeeecCCCCeeEEEeeeccCC-----CeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCeE
Confidence 3578999999999999988765 89999977653 11122356778999999998 99999999999999999
Q ss_pred EEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCC-CCeEEecccc
Q 006522 421 LLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDE-LHPCISGFGL 499 (642)
Q Consensus 421 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~-~~~kl~DfGl 499 (642)
|+||||+.+|+|++++...+ .+.+....++++|++.|++|||+ .+|+||||||+|||+|.+ +.+||+|||+
T Consensus 96 ~ivmEy~~gGdL~~~i~~~g-----~l~E~~ar~~F~Qlisav~y~H~---~gi~HRDLK~ENilld~~~~~~Kl~DFG~ 167 (370)
T KOG0583|consen 96 YIVMEYCSGGDLFDYIVNKG-----RLKEDEARKYFRQLISAVAYCHS---RGIVHRDLKPENILLDGNEGNLKLSDFGL 167 (370)
T ss_pred EEEEEecCCccHHHHHHHcC-----CCChHHHHHHHHHHHHHHHHHHh---CCEeeCCCCHHHEEecCCCCCEEEecccc
Confidence 99999999999999998843 38889999999999999999999 899999999999999999 9999999999
Q ss_pred cccCCCCCcccccceeeecCCCcccccCCCcccCccccccCC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHH
Q 006522 500 NRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGS-KFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLES 578 (642)
Q Consensus 500 a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~ 578 (642)
+...... .......+||+.|+|||++.... ..+.++||||+||+||.|++|+.||++ .....
T Consensus 168 s~~~~~~------------~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d-----~~~~~ 230 (370)
T KOG0583|consen 168 SAISPGE------------DGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDD-----SNVPN 230 (370)
T ss_pred ccccCCC------------CCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCC-----ccHHH
Confidence 9876311 11223678999999999966644 335899999999999999999999986 23444
Q ss_pred HHHHHHhccCCCcccc-ChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHH
Q 006522 579 LVRKAFRERRPLSEVI-DPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVS 633 (642)
Q Consensus 579 ~~~~~~~~~~~~~~~~-d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~ 633 (642)
..+........++..+ ++++ ..++.+|+..||.+|+++.|++
T Consensus 231 l~~ki~~~~~~~p~~~~S~~~-------------~~Li~~mL~~~P~~R~t~~~i~ 273 (370)
T KOG0583|consen 231 LYRKIRKGEFKIPSYLLSPEA-------------RSLIEKMLVPDPSTRITLLEIL 273 (370)
T ss_pred HHHHHhcCCccCCCCcCCHHH-------------HHHHHHHcCCCcccCCCHHHHh
Confidence 5555666666666666 5544 3477779999999999999998
No 23
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=9.9e-43 Score=355.95 Aligned_cols=256 Identities=26% Similarity=0.389 Sum_probs=202.5
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC-ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEE
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 424 (642)
.++.||+|+||+||+|.+..+ ||||.+.... .....+.|..|+..+++-+|.||+=+.|||..+.. .+|.
T Consensus 396 l~~rIGsGsFGtV~Rg~whGd--------VAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIiT 466 (678)
T KOG0193|consen 396 LGERIGSGSFGTVYRGRWHGD--------VAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AIIT 466 (678)
T ss_pred ccceeccccccceeecccccc--------eEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-eeee
Confidence 468899999999999998764 9999998763 23456899999999999999999999999998877 9999
Q ss_pred eeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCC
Q 006522 425 DFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLP 504 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 504 (642)
.+|+|-+|+.+||.... .|...+.++|++|||+||.|||. ++|||||||+.||++.+++++||+|||++..-.
T Consensus 467 qwCeGsSLY~hlHv~et----kfdm~~~idIAqQiaqGM~YLHA---K~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~ 539 (678)
T KOG0193|consen 467 QWCEGSSLYTHLHVQET----KFDMNTTIDIAQQIAQGMDYLHA---KNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKT 539 (678)
T ss_pred hhccCchhhhhccchhh----hhhHHHHHHHHHHHHHhhhhhhh---hhhhhhhccccceEEccCCcEEEecccceeeee
Confidence 99999999999997663 48899999999999999999999 899999999999999999999999999986422
Q ss_pred CCCcccccceeeecCCCcccccCCCcccCccccccC--CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHH
Q 006522 505 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYG--SKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRK 582 (642)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~ 582 (642)
.- ..........|..-|||||++... ..|+..+||||||||+|||+||..||.. ...+..+..
T Consensus 540 ~w----------~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi-~~~dqIifm---- 604 (678)
T KOG0193|consen 540 RW----------SGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSI-QNRDQIIFM---- 604 (678)
T ss_pred ee----------ccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCC-CChhheEEE----
Confidence 11 011122245677889999986542 4589999999999999999999999983 222211111
Q ss_pred HHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhhh
Q 006522 583 AFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 640 (642)
Q Consensus 583 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l~ 640 (642)
. ... .+.|++... ...+-.++.+|+..||..++++||.+.+|+.+|+.+.
T Consensus 605 V-GrG-----~l~pd~s~~--~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~ 654 (678)
T KOG0193|consen 605 V-GRG-----YLMPDLSKI--RSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELL 654 (678)
T ss_pred e-ccc-----ccCccchhh--hccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhh
Confidence 0 111 011111111 1234456778899999999999999999999888774
No 24
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-42 Score=350.98 Aligned_cols=243 Identities=22% Similarity=0.331 Sum_probs=201.1
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
-..||+|+.|.||.+...... +.||||++....... .+-+.+|+.+|+..+|+|||++++.|...++.+.||||
T Consensus 278 ~~kigqgaSG~vy~A~~~~~~-----~~VaiK~m~l~~Q~~-keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEy 351 (550)
T KOG0578|consen 278 FKKIGQGATGGVYVARKISTK-----QEVAIKRMDLRKQPK-KELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEY 351 (550)
T ss_pred hhhhccccccceeeeeeccCC-----ceEEEEEEEeccCCc-hhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEee
Confidence 357999999999999987775 889999998754433 26688999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCC
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 506 (642)
|++|+|.|.+.... +++.++..|++++++||+|||. ++|+|||||.+|||++.++.+||+|||++..+...
T Consensus 352 m~ggsLTDvVt~~~------~~E~qIA~Icre~l~aL~fLH~---~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~ 422 (550)
T KOG0578|consen 352 MEGGSLTDVVTKTR------MTEGQIAAICREILQGLKFLHA---RGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEE 422 (550)
T ss_pred cCCCchhhhhhccc------ccHHHHHHHHHHHHHHHHHHHh---cceeeeccccceeEeccCCcEEEeeeeeeeccccc
Confidence 99999999997543 8999999999999999999999 89999999999999999999999999999877654
Q ss_pred CcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHhc
Q 006522 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE 586 (642)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~~ 586 (642)
.. ...+.+||++|||||+.. ...|++|.||||+|++++||+-|++||.. +..+..+..-....
T Consensus 423 ~~------------KR~TmVGTPYWMAPEVvt-rk~YG~KVDIWSLGIMaIEMveGEPPYln----E~PlrAlyLIa~ng 485 (550)
T KOG0578|consen 423 QS------------KRSTMVGTPYWMAPEVVT-RKPYGPKVDIWSLGIMAIEMVEGEPPYLN----ENPLRALYLIATNG 485 (550)
T ss_pred cC------------ccccccCCCCccchhhhh-hcccCccccchhhhhHHHHHhcCCCCccC----CChHHHHHHHhhcC
Confidence 21 223678999999999944 47899999999999999999999999974 22233332222222
Q ss_pred cCC--CccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 587 RRP--LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 587 ~~~--~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
.+. ..+.+++.+.+ +..+||+.|+++|+++.|+++
T Consensus 486 ~P~lk~~~klS~~~kd-------------FL~~cL~~dv~~RasA~eLL~ 522 (550)
T KOG0578|consen 486 TPKLKNPEKLSPELKD-------------FLDRCLVVDVEQRASAKELLE 522 (550)
T ss_pred CCCcCCccccCHHHHH-------------HHHHHhhcchhcCCCHHHHhc
Confidence 221 24445555544 566699999999999999985
No 25
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.3e-41 Score=350.56 Aligned_cols=244 Identities=22% Similarity=0.322 Sum_probs=211.2
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC--ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 424 (642)
+..||+|+.|.|..|+...++ +.+|||++.+.. .......+++||-+|+-++||||+++|+.+++..+.|+|.
T Consensus 17 gkTLG~Gstg~vrlakh~~TG-----qlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl 91 (786)
T KOG0588|consen 17 GKTLGKGSTGCVRLAKHAETG-----QLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL 91 (786)
T ss_pred cccccCCCCceehhhhccccc-----ceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence 567999999999999998876 899999997652 1222356889999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCC
Q 006522 425 DFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLP 504 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 504 (642)
||+++|.|++++..++ ++++....++++||+.|+.|+|. .+|+||||||+|+|||..+.+||+|||+|..-.
T Consensus 92 Eyv~gGELFdylv~kG-----~l~e~eaa~ff~QIi~gv~yCH~---~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~ 163 (786)
T KOG0588|consen 92 EYVPGGELFDYLVRKG-----PLPEREAAHFFRQILDGVSYCHA---FNICHRDLKPENLLLDVKNNIKIADFGMASLEV 163 (786)
T ss_pred EecCCchhHHHHHhhC-----CCCCHHHHHHHHHHHHHHHHHhh---hcceeccCCchhhhhhcccCEeeeccceeeccc
Confidence 9999999999998766 48999999999999999999999 799999999999999999999999999997643
Q ss_pred CCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHH
Q 006522 505 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAF 584 (642)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~ 584 (642)
.+ ....+.||++.|.|||+..+....+.++||||.|||||.|+||+.||++ +++..++.+..
T Consensus 164 ~g-------------klLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdD-----dNir~LLlKV~ 225 (786)
T KOG0588|consen 164 PG-------------KLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDD-----DNIRVLLLKVQ 225 (786)
T ss_pred CC-------------ccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCC-----ccHHHHHHHHH
Confidence 22 2233679999999999966655567999999999999999999999983 46778888888
Q ss_pred hccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 585 RERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 585 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
++...++..+.++..+ |+.+++..||+.|.|++||.+
T Consensus 226 ~G~f~MPs~Is~eaQd-------------LLr~ml~VDp~~RiT~~eI~k 262 (786)
T KOG0588|consen 226 RGVFEMPSNISSEAQD-------------LLRRMLDVDPSTRITTEEILK 262 (786)
T ss_pred cCcccCCCcCCHHHHH-------------HHHHHhccCccccccHHHHhh
Confidence 8888788778776654 666699999999999999976
No 26
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=7.9e-41 Score=339.57 Aligned_cols=261 Identities=21% Similarity=0.315 Sum_probs=203.8
Q ss_pred ccccHHHHHhhcccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCcc--ccHHHHHHHHHHHhcccCCCeeeEEE
Q 006522 335 FSLELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT--WRFKDFESEVEAIARVQHPNIVRLKA 412 (642)
Q Consensus 335 ~~~~~~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~ 412 (642)
..++.+++.......+|+|++|.||+|... + +.||||+++..... ...+.|.+|+.+|++++|||||+++|
T Consensus 13 ~~i~~~~i~~~~~~~i~~g~~~~v~~~~~~-~------~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g 85 (283)
T PHA02988 13 KCIESDDIDKYTSVLIKENDQNSIYKGIFN-N------KEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYG 85 (283)
T ss_pred eecCHHHcCCCCCeEEeeCCceEEEEEEEC-C------EEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEee
Confidence 345667776666788999999999999984 3 79999999765322 22477889999999999999999999
Q ss_pred EEEe----CCceEEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCC
Q 006522 413 FYYA----NDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDD 488 (642)
Q Consensus 413 ~~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~ 488 (642)
++.+ ....++||||+++|+|.+++.... .++|....+++.|++.||.|||+. .+++||||||+||++++
T Consensus 86 ~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~-----~~~~~~~~~i~~~i~~~l~~lH~~--~~~~Hrdlkp~nill~~ 158 (283)
T PHA02988 86 FIIDIVDDLPRLSLILEYCTRGYLREVLDKEK-----DLSFKTKLDMAIDCCKGLYNLYKY--TNKPYKNLTSVSFLVTE 158 (283)
T ss_pred eEEecccCCCceEEEEEeCCCCcHHHHHhhCC-----CCChhHHHHHHHHHHHHHHHHHhc--CCCCCCcCChhhEEECC
Confidence 9987 346789999999999999997643 389999999999999999999972 37889999999999999
Q ss_pred CCCeEEecccccccCCCCCcccccceeeecCCCcccccCCCcccCcccccc-CCCCCcccchHHHHHHHHHHHhCCCCCC
Q 006522 489 ELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIY-GSKFTQKCDVYSFGIVLLEILTGRLPDA 567 (642)
Q Consensus 489 ~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~sDV~S~Gvvl~el~tG~~P~~ 567 (642)
++.+||+|||+++...... ....|+..|+|||++.. ...++.++|||||||++|||+||+.||.
T Consensus 159 ~~~~kl~dfg~~~~~~~~~---------------~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~ 223 (283)
T PHA02988 159 NYKLKIICHGLEKILSSPP---------------FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFE 223 (283)
T ss_pred CCcEEEcccchHhhhcccc---------------ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCC
Confidence 9999999999988653221 12356778999998543 1578999999999999999999999997
Q ss_pred CCCCCcccHHHHHHHHHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhhh
Q 006522 568 GPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 640 (642)
Q Consensus 568 ~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l~ 640 (642)
.... ..+............ ++.. ....+.+++.+||+.||++|||++|+++.|+.++
T Consensus 224 ~~~~-----~~~~~~i~~~~~~~~--~~~~---------~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~ 280 (283)
T PHA02988 224 NLTT-----KEIYDLIINKNNSLK--LPLD---------CPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYK 280 (283)
T ss_pred CCCH-----HHHHHHHHhcCCCCC--CCCc---------CcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence 5321 222232222211111 1111 1123556888999999999999999999999875
No 27
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=3.6e-41 Score=312.08 Aligned_cols=259 Identities=18% Similarity=0.270 Sum_probs=202.4
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCcccc-HHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEe
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWR-FKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~-~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
...+|+|.||.||+|++..++ +.||||+++.....+. .....|||+.|+.++|+||+.++++|-..+...+|+|
T Consensus 7 ~~~lGEG~~gvVyka~d~~t~-----~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 7 LEKLGEGTYGVVYKARDTETG-----KRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred hhhhcCcceEEEEEEEecCCC-----cEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 467999999999999998876 8999999987643322 2668899999999999999999999999999999999
Q ss_pred eccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCC
Q 006522 426 FIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPG 505 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 505 (642)
||+. +|+..++.... .++..++..++.++++|++|||+ +.|+||||||.|+|++++|.+||+|||+|+.+..
T Consensus 82 fm~t-dLe~vIkd~~i----~l~pa~iK~y~~m~LkGl~y~H~---~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~ 153 (318)
T KOG0659|consen 82 FMPT-DLEVVIKDKNI----ILSPADIKSYMLMTLKGLAYCHS---KWILHRDLKPNNLLISSDGQLKIADFGLARFFGS 153 (318)
T ss_pred eccc-cHHHHhccccc----ccCHHHHHHHHHHHHHHHHHHHh---hhhhcccCCccceEEcCCCcEEeecccchhccCC
Confidence 9987 99999987653 58999999999999999999999 8999999999999999999999999999998764
Q ss_pred CCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHh
Q 006522 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR 585 (642)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~ 585 (642)
.... .+..+.|.+|+|||.+.+.+.|+...||||.|||+.||+-|.+-|.+. .+-..+..+++. +.
T Consensus 154 p~~~------------~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~-sDidQL~~If~~-LG 219 (318)
T KOG0659|consen 154 PNRI------------QTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGD-SDIDQLSKIFRA-LG 219 (318)
T ss_pred CCcc------------cccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCC-chHHHHHHHHHH-cC
Confidence 4221 112256788999999888889999999999999999999987666543 222223222221 11
Q ss_pred ccCCCccccChhhhhch-----h----------HHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 006522 586 ERRPLSEVIDPALVKEI-----H----------AKRQVLATFHIALNCTELDPEFRPRMRTVSES 635 (642)
Q Consensus 586 ~~~~~~~~~d~~l~~~~-----~----------~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~ 635 (642)
.+ .+...|++.... . -.......++++..++..||.+|+++.|++++
T Consensus 220 TP---~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 220 TP---TPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred CC---CcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 11 111111111000 0 01123456899999999999999999998863
No 28
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-41 Score=317.40 Aligned_cols=225 Identities=18% Similarity=0.283 Sum_probs=195.6
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC--ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEE
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLI 423 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 423 (642)
....||.|+||.|..++.+.++ ..+|+|++.+.. ...+++...+|..+|+.+.||.++++++.|.+.+..|||
T Consensus 48 ~~~tlGtGSFGrV~LVr~k~~g-----~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymv 122 (355)
T KOG0616|consen 48 RLKTLGTGSFGRVHLVREKHSG-----NYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMV 122 (355)
T ss_pred heeeeccCccceEEEEEEccCC-----ceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEE
Confidence 4578999999999999998876 899999998753 234557788999999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccC
Q 006522 424 SDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLL 503 (642)
Q Consensus 424 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 503 (642)
|||++||.|+.+++..++ +++.....++.||+.||+|||+ ..|++|||||+|||||.+|.+||.|||+|+.+
T Consensus 123 meyv~GGElFS~Lrk~~r-----F~e~~arFYAAeivlAleylH~---~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v 194 (355)
T KOG0616|consen 123 MEYVPGGELFSYLRKSGR-----FSEPHARFYAAEIVLALEYLHS---LDIIYRDLKPENLLLDQNGHIKITDFGFAKRV 194 (355)
T ss_pred EeccCCccHHHHHHhcCC-----CCchhHHHHHHHHHHHHHHHHh---cCeeeccCChHHeeeccCCcEEEEeccceEEe
Confidence 999999999999998664 8999999999999999999999 89999999999999999999999999999987
Q ss_pred CCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHH
Q 006522 504 PGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKA 583 (642)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~ 583 (642)
... +-+.||||.|+|||++.. ..++.++|.|||||++|||+.|.+||..... ....+++
T Consensus 195 ~~r---------------T~TlCGTPeYLAPEii~s-k~ynkavDWWalGVLIYEMlaG~pPF~~~~~-----~~iY~KI 253 (355)
T KOG0616|consen 195 SGR---------------TWTLCGTPEYLAPEIIQS-KGYNKAVDWWALGVLIYEMLAGYPPFYDDNP-----IQIYEKI 253 (355)
T ss_pred cCc---------------EEEecCCccccChHHhhc-CCCCcchhHHHHHHHHHHHHcCCCCCcCCCh-----HHHHHHH
Confidence 543 125789999999999554 8899999999999999999999999985332 4566677
Q ss_pred HhccCCCccccChhhhhchhH
Q 006522 584 FRERRPLSEVIDPALVKEIHA 604 (642)
Q Consensus 584 ~~~~~~~~~~~d~~l~~~~~~ 604 (642)
......++..+++.+.+.+..
T Consensus 254 ~~~~v~fP~~fs~~~kdLl~~ 274 (355)
T KOG0616|consen 254 LEGKVKFPSYFSSDAKDLLKK 274 (355)
T ss_pred HhCcccCCcccCHHHHHHHHH
Confidence 777777788888877664433
No 29
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-41 Score=343.70 Aligned_cols=239 Identities=26% Similarity=0.401 Sum_probs=193.2
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
-+.+|.|+.|.||.|++.. ..||||+++.-. +.+|+-|++|+||||+.+.|+|......++||||
T Consensus 129 LeWlGSGaQGAVF~Grl~n-------etVAVKKV~elk--------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEf 193 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGRLHN-------ETVAVKKVRELK--------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEF 193 (904)
T ss_pred hhhhccCcccceeeeeccC-------ceehhHHHhhhh--------hhhHHHHHhccCcceeeEeeeecCCceeEEeeec
Confidence 3689999999999999887 689999986422 3578889999999999999999999999999999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCC
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 506 (642)
|..|-|+.+|+... +++-...+.|..+||.||.|||. ..|||||||+-||||..+..+||+|||.++...+.
T Consensus 194 Ca~GqL~~VLka~~-----~itp~llv~Wsk~IA~GM~YLH~---hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~ 265 (904)
T KOG4721|consen 194 CAQGQLYEVLKAGR-----PITPSLLVDWSKGIAGGMNYLHL---HKIIHRDLKSPNILISYDDVVKISDFGTSKELSDK 265 (904)
T ss_pred cccccHHHHHhccC-----ccCHHHHHHHHHHhhhhhHHHHH---hhHhhhccCCCceEeeccceEEeccccchHhhhhh
Confidence 99999999998765 37778889999999999999999 79999999999999999999999999999876543
Q ss_pred CcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHhc
Q 006522 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE 586 (642)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~~ 586 (642)
. .....+||..|||||++. ....++|+||||||||||||+||..||.+.+... ++...
T Consensus 266 S-------------TkMSFaGTVaWMAPEvIr-nePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssA-----IIwGV--- 323 (904)
T KOG4721|consen 266 S-------------TKMSFAGTVAWMAPEVIR-NEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSA-----IIWGV--- 323 (904)
T ss_pred h-------------hhhhhhhhHhhhCHHHhh-cCCcccccceehhHHHHHHHHhcCCCccccchhe-----eEEec---
Confidence 1 012568999999999955 4889999999999999999999999997533321 11100
Q ss_pred cCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHh
Q 006522 587 RRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 638 (642)
Q Consensus 587 ~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 638 (642)
.-.. ........+...+.-|+..||+..|..||++++++..|+-
T Consensus 324 GsNs--------L~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldI 367 (904)
T KOG4721|consen 324 GSNS--------LHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDI 367 (904)
T ss_pred cCCc--------ccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhh
Confidence 0000 0001111222344457788999999999999999988864
No 30
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-40 Score=337.45 Aligned_cols=262 Identities=23% Similarity=0.345 Sum_probs=207.6
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEe
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
..+.||+|.||.|..+....+ ..||||.++........++|.+|+++|.+++|||||+++|.|..++..++|+|
T Consensus 542 ~~ekiGeGqFGEVhLCeveg~------lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~E 615 (807)
T KOG1094|consen 542 FKEKIGEGQFGEVHLCEVEGP------LKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITE 615 (807)
T ss_pred hhhhhcCcccceeEEEEecCc------eEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHH
Confidence 468999999999999998875 89999999987655556899999999999999999999999999999999999
Q ss_pred eccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCC
Q 006522 426 FIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPG 505 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 505 (642)
||++|+|.+++..+.... +.-...++|+.|||.||+||.+ .++||||+.++|+|+|.++++||+|||+++.+-.
T Consensus 616 YmEnGDLnqFl~aheapt---~~t~~~vsi~tqiasgmaYLes---~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lys 689 (807)
T KOG1094|consen 616 YMENGDLNQFLSAHELPT---AETAPGVSICTQIASGMAYLES---LNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYS 689 (807)
T ss_pred HHhcCcHHHHHHhccCcc---cccchhHHHHHHHHHHHHHHHh---hchhhccccccceeecCcccEEecCccccccccc
Confidence 999999999998875321 3445667899999999999999 7999999999999999999999999999997655
Q ss_pred CCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh--CCCCCCCCCCCcccHHHHHHHH
Q 006522 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT--GRLPDAGPENDGKGLESLVRKA 583 (642)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t--G~~P~~~~~~~~~~l~~~~~~~ 583 (642)
..++.... ..+-+..|||||.++. +++++++|||+|||++||+++ .+.||....++ ...+-....
T Consensus 690 g~yy~vqg----------r~vlpiRwmawEsill-gkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e--~vven~~~~ 756 (807)
T KOG1094|consen 690 GDYYRVQG----------RAVLPIRWMAWESILL-GKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDE--QVVENAGEF 756 (807)
T ss_pred CCceeeec----------ceeeeeeehhHHHHHh-ccccchhhhhhhHHHHHHHHHHHhhCchhhhhHH--HHHHhhhhh
Confidence 44333221 1234567999999776 799999999999999999876 78898754332 122222222
Q ss_pred HhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhhh
Q 006522 584 FRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 640 (642)
Q Consensus 584 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l~ 640 (642)
++.... ...+. ...-+-.++++++++||..|.++||+++++...|++..
T Consensus 757 ~~~~~~-~~~l~-------~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~~ 805 (807)
T KOG1094|consen 757 FRDQGR-QVVLS-------RPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQEDA 805 (807)
T ss_pred cCCCCc-ceecc-------CCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHhc
Confidence 222221 11111 01123346778999999999999999999999888753
No 31
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=3.6e-40 Score=348.06 Aligned_cols=263 Identities=22% Similarity=0.325 Sum_probs=200.4
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcc-cCCCeeeEEEEEEeCCceEEEE
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLIS 424 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~ 424 (642)
..+.||+|+||.||+|.............||||+++........+.+.+|+.+++.+ +|||||+++++|...+..++||
T Consensus 39 ~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~~lv~ 118 (375)
T cd05104 39 FGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPTLVIT 118 (375)
T ss_pred hhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcceeee
Confidence 468899999999999975432222333789999997654333446789999999999 8999999999999999999999
Q ss_pred eeccCCcHHHHHhcCCCC--------------------------------------------------------------
Q 006522 425 DFIRNGSLYAALHAGPSD-------------------------------------------------------------- 442 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~-------------------------------------------------------------- 442 (642)
||+++|+|.++++.....
T Consensus 119 E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (375)
T cd05104 119 EYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSYIDQD 198 (375)
T ss_pred hhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccceecccc
Confidence 999999999999753210
Q ss_pred --------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCCCcccccce
Q 006522 443 --------SLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNET 514 (642)
Q Consensus 443 --------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~ 514 (642)
....++|..+.+++.||++||+|||+ .+|+||||||+|||+++++.+||+|||+++..........
T Consensus 199 ~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~--- 272 (375)
T cd05104 199 VTSEILEEDELALDTEDLLSFSYQVAKGMSFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVV--- 272 (375)
T ss_pred cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCchhhEEEECCCcEEEecCccceeccCcccccc---
Confidence 01248899999999999999999999 8999999999999999999999999999986543321100
Q ss_pred eeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHHHhccCC-Ccc
Q 006522 515 IVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRP-LSE 592 (642)
Q Consensus 515 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~~l~~~~~~~~~~~~~-~~~ 592 (642)
.....++..|+|||++. +..++.++|||||||++|||+| |..||.....+. .....+. ..... .+.
T Consensus 273 -------~~~~~~~~~y~aPE~~~-~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~-~~~~~~~---~~~~~~~~~ 340 (375)
T cd05104 273 -------KGNARLPVKWMAPESIF-NCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS-KFYKMIK---EGYRMLSPE 340 (375)
T ss_pred -------cCCCCCCcceeChhHhc-CCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH-HHHHHHH---hCccCCCCC
Confidence 01223456799999854 4778999999999999999998 889987543221 1222221 11111 111
Q ss_pred ccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhh
Q 006522 593 VIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 639 (642)
Q Consensus 593 ~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l 639 (642)
..+ .++.+++.+||+.||++||++.||++.|++.
T Consensus 341 ~~~-------------~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 341 CAP-------------SEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred CCC-------------HHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 111 2456789999999999999999999999864
No 32
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=8.7e-40 Score=335.93 Aligned_cols=267 Identities=25% Similarity=0.388 Sum_probs=198.1
Q ss_pred ccccCccCCceeEEEEecCCCC-----------CCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSG-----------MGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYY 415 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~-----------~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~ 415 (642)
...||+|+||.||++....+.. .+....||+|.+..........+|.+|++++.+++||||+++++++.
T Consensus 10 ~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 89 (304)
T cd05096 10 KEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRLLGVCV 89 (304)
T ss_pred eeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEe
Confidence 4679999999999998754321 12336799999976543334468999999999999999999999999
Q ss_pred eCCceEEEEeeccCCcHHHHHhcCCCC--------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCC
Q 006522 416 ANDEKLLISDFIRNGSLYAALHAGPSD--------------SLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKS 481 (642)
Q Consensus 416 ~~~~~~lv~e~~~~gsL~~~l~~~~~~--------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp 481 (642)
..+..++||||+++|+|.+++...... ....++|..+.+++.||+.||+|||+ .+|+||||||
T Consensus 90 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~ivH~dlkp 166 (304)
T cd05096 90 DEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSS---LNFVHRDLAT 166 (304)
T ss_pred cCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHH---CCccccCcch
Confidence 999999999999999999998653211 11347899999999999999999999 8999999999
Q ss_pred CCeeeCCCCCeEEecccccccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh
Q 006522 482 TKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT 561 (642)
Q Consensus 482 ~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t 561 (642)
+|||+++++.+||+|||+++.+....... . .....++..|+|||++.. ..++.++|||||||++|||++
T Consensus 167 ~Nill~~~~~~kl~DfG~~~~~~~~~~~~------~----~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~ 235 (304)
T cd05096 167 RNCLVGENLTIKIADFGMSRNLYAGDYYR------I----QGRAVLPIRWMAWECILM-GKFTTASDVWAFGVTLWEILM 235 (304)
T ss_pred hheEEcCCccEEECCCccceecccCceeE------e----cCcCCCCccccCHHHHhc-CCCCchhhhHHHHHHHHHHHH
Confidence 99999999999999999997653321100 0 012345678999998554 678999999999999999997
Q ss_pred --CCCCCCCCCCCcccHHHHHHHHHhcc-CCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHh
Q 006522 562 --GRLPDAGPENDGKGLESLVRKAFRER-RPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 638 (642)
Q Consensus 562 --G~~P~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 638 (642)
+..||..... ......+....... ........+ .....+.+++.+||+.||++|||+.||.+.|++
T Consensus 236 ~~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~ 304 (304)
T cd05096 236 LCKEQPYGELTD--EQVIENAGEFFRDQGRQVYLFRPP---------PCPQGLYELMLQCWSRDCRERPSFSDIHAFLTE 304 (304)
T ss_pred ccCCCCCCcCCH--HHHHHHHHHHhhhccccccccCCC---------CCCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence 5667764322 11222222221111 100000011 111345679999999999999999999998864
No 33
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=4.3e-40 Score=347.11 Aligned_cols=264 Identities=23% Similarity=0.357 Sum_probs=201.7
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcc-cCCCeeeEEEEEEeCCceEEEE
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLIS 424 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~ 424 (642)
..+.||+|+||.||+++....+.......||||+++........+.+.+|+++++++ +|||||+++++|...+..++||
T Consensus 42 ~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~~lv~ 121 (374)
T cd05106 42 FGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPVLVIT 121 (374)
T ss_pred ehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCeEEeH
Confidence 468899999999999987544333344689999998654444446789999999999 8999999999999999999999
Q ss_pred eeccCCcHHHHHhcCCC---------------------------------------------------------------
Q 006522 425 DFIRNGSLYAALHAGPS--------------------------------------------------------------- 441 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~--------------------------------------------------------------- 441 (642)
||+++|+|.++++....
T Consensus 122 ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (374)
T cd05106 122 EYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSKDEE 201 (374)
T ss_pred hhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccccccchh
Confidence 99999999999864321
Q ss_pred --CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCCCcccccceeeecC
Q 006522 442 --DSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSG 519 (642)
Q Consensus 442 --~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~ 519 (642)
....++++..+.+|+.||+.||+|||+ ++|+||||||+|||+++++.+||+|||+++........ . .
T Consensus 202 ~~~~~~~l~~~~~~~i~~qi~~aL~yLH~---~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~------~-~- 270 (374)
T cd05106 202 DTEDSWPLDLDDLLRFSSQVAQGMDFLAS---KNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNY------V-V- 270 (374)
T ss_pred ccCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcce------e-e-
Confidence 011358899999999999999999999 89999999999999999999999999999765432110 0 0
Q ss_pred CCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHHHhccCCCccccChhh
Q 006522 520 TGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPAL 598 (642)
Q Consensus 520 ~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l 598 (642)
.....++..|||||++. +..++.++|||||||++|||++ |+.||....... .+........ ....+..++
T Consensus 271 --~~~~~~~~~y~aPE~~~-~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~-~~~~~~~~~~--~~~~~~~~~--- 341 (374)
T cd05106 271 --KGNARLPVKWMAPESIF-DCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS-KFYKMVKRGY--QMSRPDFAP--- 341 (374)
T ss_pred --ccCCCCccceeCHHHhc-CCCCCccccHHHHHHHHHHHHhCCCCCCccccccH-HHHHHHHccc--CccCCCCCC---
Confidence 01223456799999854 4678999999999999999998 999997543211 1111111110 111111122
Q ss_pred hhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhh
Q 006522 599 VKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 639 (642)
Q Consensus 599 ~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l 639 (642)
.++.+++.+||+.||++|||+.||+++|+++
T Consensus 342 ----------~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~ 372 (374)
T cd05106 342 ----------PEIYSIMKMCWNLEPTERPTFSQISQLIQRQ 372 (374)
T ss_pred ----------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 2355688889999999999999999999986
No 34
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-40 Score=345.36 Aligned_cols=256 Identities=26% Similarity=0.402 Sum_probs=201.7
Q ss_pred cccCccCCceeEEEEecCCCCCCCCeEEEEEEecCC--CccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEe
Q 006522 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG--DATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 348 ~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
..||+|+||.||+|.+....+... ..||||..+.. ......++|.+|+++|++++|||||+++|++......++|||
T Consensus 163 kkLGeGaFGeV~~G~l~~~~~~~~-~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~ivmE 241 (474)
T KOG0194|consen 163 KKLGEGAFGEVFKGKLKLKNGFKV-VPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLMLVME 241 (474)
T ss_pred ceeecccccEEEEEEEEecCCcee-eeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEEEEE
Confidence 789999999999999987643211 22999999852 334556899999999999999999999999999999999999
Q ss_pred eccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCC
Q 006522 426 FIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPG 505 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 505 (642)
+|.||+|.++|+.... .++..+++.++.++|+||+|||+ .++|||||..+|+|++.++.+||+|||+++.-..
T Consensus 242 l~~gGsL~~~L~k~~~----~v~~~ek~~~~~~AA~Gl~YLh~---k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~ 314 (474)
T KOG0194|consen 242 LCNGGSLDDYLKKNKK----SLPTLEKLRFCYDAARGLEYLHS---KNCIHRDIAARNCLYSKKGVVKISDFGLSRAGSQ 314 (474)
T ss_pred ecCCCcHHHHHHhCCC----CCCHHHHHHHHHHHHhHHHHHHH---CCCcchhHhHHHheecCCCeEEeCccccccCCcc
Confidence 9999999999988664 38999999999999999999999 8999999999999999999999999999876431
Q ss_pred CCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHHH
Q 006522 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAF 584 (642)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~~l~~~~~~~~ 584 (642)
. .... ....-...|+|||.+.. ..|+.++|||||||++||+++ |..||.+... .+...+..
T Consensus 315 ~---~~~~---------~~~klPirWLAPEtl~~-~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~-----~~v~~kI~ 376 (474)
T KOG0194|consen 315 Y---VMKK---------FLKKLPIRWLAPETLNT-GIFSFKTDVWSFGVLLWEIFENGAEPYPGMKN-----YEVKAKIV 376 (474)
T ss_pred e---eecc---------ccccCcceecChhhhcc-CccccccchhheeeeEEeeeccCCCCCCCCCH-----HHHHHHHH
Confidence 1 0000 01123456999999665 689999999999999999999 8999986432 22333332
Q ss_pred hccCCC-ccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhhhc
Q 006522 585 RERRPL-SEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 641 (642)
Q Consensus 585 ~~~~~~-~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l~~ 641 (642)
....+. ...-.|. .+..++..||..+|++||+|.++.+.|+.+..
T Consensus 377 ~~~~r~~~~~~~p~------------~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~ 422 (474)
T KOG0194|consen 377 KNGYRMPIPSKTPK------------ELAKVMKQCWKKDPEDRPTMSTIKKKLEALEK 422 (474)
T ss_pred hcCccCCCCCCCHH------------HHHHHHHHhccCChhhccCHHHHHHHHHHHHh
Confidence 222211 1112222 23345668999999999999999999998753
No 35
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=3e-40 Score=315.01 Aligned_cols=258 Identities=20% Similarity=0.270 Sum_probs=200.5
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCcccc-HHHHHHHHHHHhcccCCCeeeEEEEEEeC--CceEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWR-FKDFESEVEAIARVQHPNIVRLKAFYYAN--DEKLLI 423 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~-~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~lv 423 (642)
-+.|++|.||.||+|+++.+. ..||+|+++-...... --.-+|||.+|.+++|||||.+.++.... +.+|+|
T Consensus 81 lnrI~EGtyGiVYRakdk~t~-----eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~V 155 (419)
T KOG0663|consen 81 LNRIEEGTYGVVYRAKDKKTD-----EIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIV 155 (419)
T ss_pred HhhcccCcceeEEEeccCCcc-----eeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeee
Confidence 477999999999999999887 8999999986533221 13457999999999999999999987654 579999
Q ss_pred EeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccC
Q 006522 424 SDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLL 503 (642)
Q Consensus 424 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 503 (642)
||||+. ||..++..-. .++...+...++.|+++|++|||. +.|+|||||++|+|+...|.+||+|||+||.+
T Consensus 156 Me~~Eh-DLksl~d~m~----q~F~~~evK~L~~QlL~glk~lH~---~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~y 227 (419)
T KOG0663|consen 156 MEYVEH-DLKSLMETMK----QPFLPGEVKTLMLQLLRGLKHLHD---NWILHRDLKTSNLLLSHKGILKIADFGLAREY 227 (419)
T ss_pred HHHHHh-hHHHHHHhcc----CCCchHHHHHHHHHHHHHHHHHhh---ceeEecccchhheeeccCCcEEecccchhhhh
Confidence 999998 9999998655 358899999999999999999999 88999999999999999999999999999987
Q ss_pred CCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHH
Q 006522 504 PGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKA 583 (642)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~ 583 (642)
..... ..+..+.|.+|+|||.+++...|+++.||||+|||+.||+++++-|.+... ...+.++
T Consensus 228 gsp~k------------~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE-----~dQl~~I 290 (419)
T KOG0663|consen 228 GSPLK------------PYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSE-----IDQLDKI 290 (419)
T ss_pred cCCcc------------cCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCch-----HHHHHHH
Confidence 65421 122456788999999988888899999999999999999999988876332 1222222
Q ss_pred HhccCCCccccChhhhh-------------------chhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 584 FRERRPLSEVIDPALVK-------------------EIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 584 ~~~~~~~~~~~d~~l~~-------------------~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
++.-..-.+.+.|.+.. .+....-...-+++....+..||++|-|+.|.++
T Consensus 291 f~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~ 360 (419)
T KOG0663|consen 291 FKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLK 360 (419)
T ss_pred HHHhCCCccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhc
Confidence 22211112222222111 0000001145678999999999999999999874
No 36
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=1.8e-39 Score=326.99 Aligned_cols=255 Identities=22% Similarity=0.347 Sum_probs=197.8
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEe
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
....||+|+||.||+|+...... ....||+|.++........+.|.+|+.++++++||||+++++++...+..++|||
T Consensus 9 ~~~~ig~G~fg~V~~~~~~~~~~--~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 86 (266)
T cd05064 9 IERILGTGRFGELCRGCLKLPSK--RELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIVTE 86 (266)
T ss_pred EeeeecccCCCeEEEEEEecCCC--ceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEEEE
Confidence 45789999999999998754321 2278999999875444444679999999999999999999999999999999999
Q ss_pred eccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCC
Q 006522 426 FIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPG 505 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 505 (642)
|+++|+|.+++..... .++|..++.++.|++.||+|||+ .+++||||||+||+++.++.+|++|||.+.....
T Consensus 87 ~~~~~~L~~~l~~~~~----~l~~~~~~~~~~~i~~al~~lH~---~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~ 159 (266)
T cd05064 87 YMSNGALDSFLRKHEG----QLVAGQLMGMLPGLASGMKYLSE---MGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKS 159 (266)
T ss_pred eCCCCcHHHHHHhCCC----CCCHHHHHHHHHHHHHHHHHHHH---CCEeeccccHhhEEEcCCCcEEECCCcccccccc
Confidence 9999999999976432 48999999999999999999999 8999999999999999999999999998765321
Q ss_pred CCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHHH
Q 006522 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAF 584 (642)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~~l~~~~~~~~ 584 (642)
... .......++..|+|||++. +..++.++|||||||++||+++ |+.||..... ...++...
T Consensus 160 ~~~-----------~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~-----~~~~~~~~ 222 (266)
T cd05064 160 EAI-----------YTTMSGKSPVLWAAPEAIQ-YHHFSSASDVWSFGIVMWEVMSYGERPYWDMSG-----QDVIKAVE 222 (266)
T ss_pred cch-----------hcccCCCCceeecCHHHHh-hCCccchhHHHHHHHHHHHHhcCCCCCcCcCCH-----HHHHHHHH
Confidence 110 0011223456799999854 4788999999999999999775 9999975322 12222221
Q ss_pred hcc-CCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhh
Q 006522 585 RER-RPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 639 (642)
Q Consensus 585 ~~~-~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l 639 (642)
... .+.+..+ ...+.+++.+||+.+|++||++.|+.+.|+++
T Consensus 223 ~~~~~~~~~~~-------------~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 223 DGFRLPAPRNC-------------PNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred CCCCCCCCCCC-------------CHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 111 1111111 12356688899999999999999999999765
No 37
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=3.9e-40 Score=341.25 Aligned_cols=242 Identities=20% Similarity=0.290 Sum_probs=194.2
Q ss_pred ccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC--ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 349 ~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
+||+|+||.||++....++ +.||+|+++... .......+.+|+.++++++||||+++++++...+..++||||
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~ 76 (323)
T cd05571 2 LLGKGTFGKVILVREKATG-----KYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEY 76 (323)
T ss_pred eeeeCCCeEEEEEEECCCC-----CEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeC
Confidence 6899999999999987765 899999987542 222346788999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCC
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 506 (642)
+++|+|.+++.... .+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++.....
T Consensus 77 ~~~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~L~~lH~---~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~ 148 (323)
T cd05571 77 ANGGELFFHLSRER-----VFSEDRARFYGAEIVSALGYLHS---CDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISD 148 (323)
T ss_pred CCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccC
Confidence 99999999997643 48999999999999999999999 89999999999999999999999999998753221
Q ss_pred CcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHhc
Q 006522 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE 586 (642)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~~ 586 (642)
. .......||+.|+|||++. +..++.++||||+||++|||+||+.||.... ...........
T Consensus 149 ~------------~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwSlG~il~elltg~~Pf~~~~-----~~~~~~~~~~~ 210 (323)
T cd05571 149 G------------ATMKTFCGTPEYLAPEVLE-DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD-----HEKLFELILME 210 (323)
T ss_pred C------------CcccceecCccccChhhhc-CCCCCccccCcccchhhhhhhcCCCCCCCCC-----HHHHHHHHHcC
Confidence 1 0111346889999999854 4778999999999999999999999997422 22233333333
Q ss_pred cCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCC-----CHHHHHH
Q 006522 587 RRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRP-----RMRTVSE 634 (642)
Q Consensus 587 ~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----s~~ev~~ 634 (642)
...++..+++ ++.+++.+||+.||++|| ++.|+++
T Consensus 211 ~~~~p~~~~~-------------~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 211 EIRFPRTLSP-------------EAKSLLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred CCCCCCCCCH-------------HHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 3333333333 244578889999999999 7888764
No 38
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=4.7e-40 Score=338.98 Aligned_cols=238 Identities=22% Similarity=0.316 Sum_probs=192.1
Q ss_pred cCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC--ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEeec
Q 006522 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFI 427 (642)
Q Consensus 350 lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~ 427 (642)
||+|+||.||++....++ +.||+|.+.... .......+.+|+.++.+++||||+++++++...+..++||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~-----~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 75 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQ-----RIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFI 75 (312)
T ss_pred CCcCCCeEEEEEEECCCC-----CEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCC
Confidence 699999999999987765 789999987531 2233467889999999999999999999999999999999999
Q ss_pred cCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCCC
Q 006522 428 RNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTS 507 (642)
Q Consensus 428 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 507 (642)
++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++......
T Consensus 76 ~~g~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~---~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~ 147 (312)
T cd05585 76 NGGELFHHLQREG-----RFDLSRARFYTAELLCALENLHK---FNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD 147 (312)
T ss_pred CCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHeEECCCCcEEEEECcccccCccCC
Confidence 9999999997643 38999999999999999999999 899999999999999999999999999987532221
Q ss_pred cccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHhcc
Q 006522 508 KVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRER 587 (642)
Q Consensus 508 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~~~ 587 (642)
. ......||+.|+|||++. +..++.++||||+||++|||+||+.||... ......+......
T Consensus 148 ~------------~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwslGvil~el~tg~~pf~~~-----~~~~~~~~~~~~~ 209 (312)
T cd05585 148 D------------KTNTFCGTPEYLAPELLL-GHGYTKAVDWWTLGVLLYEMLTGLPPFYDE-----NVNEMYRKILQEP 209 (312)
T ss_pred C------------ccccccCCcccCCHHHHc-CCCCCCccceechhHHHHHHHhCCCCcCCC-----CHHHHHHHHHcCC
Confidence 0 112346889999999854 477899999999999999999999999742 2334444444444
Q ss_pred CCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHH
Q 006522 588 RPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRT 631 (642)
Q Consensus 588 ~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~e 631 (642)
..++..+++. +.+++.+||+.||++||++.+
T Consensus 210 ~~~~~~~~~~-------------~~~li~~~L~~dp~~R~~~~~ 240 (312)
T cd05585 210 LRFPDGFDRD-------------AKDLLIGLLSRDPTRRLGYNG 240 (312)
T ss_pred CCCCCcCCHH-------------HHHHHHHHcCCCHHHcCCCCC
Confidence 3334444433 345778899999999986433
No 39
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.9e-40 Score=322.58 Aligned_cols=243 Identities=21% Similarity=0.333 Sum_probs=201.6
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC--ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 424 (642)
.+.||+|.||.|-+++....+ +.||||.+++.. +....-.+.+||+||+.++||||+.+++.|++.+.+.+||
T Consensus 58 ~etLGkGTYGKVk~A~e~~sg-----R~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivM 132 (668)
T KOG0611|consen 58 TETLGKGTYGKVKLAYEHKSG-----REVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVM 132 (668)
T ss_pred HHHhcCCcccceeehhhccCC-----cEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEE
Confidence 457999999999999986654 899999998762 2333456899999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCC
Q 006522 425 DFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLP 504 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 504 (642)
||..+|.|+|++.+.+. |++.....+++||.+|+.|+|. ++++|||||.+|||+|.++++||+|||++-.+.
T Consensus 133 EYaS~GeLYDYiSer~~-----LsErEaRhfFRQIvSAVhYCHk---nrVvHRDLKLENILLD~N~NiKIADFGLSNly~ 204 (668)
T KOG0611|consen 133 EYASGGELYDYISERGS-----LSEREARHFFRQIVSAVHYCHK---NRVVHRDLKLENILLDQNNNIKIADFGLSNLYA 204 (668)
T ss_pred EecCCccHHHHHHHhcc-----ccHHHHHHHHHHHHHHHHHHhh---ccceecccchhheeecCCCCeeeeccchhhhhc
Confidence 99999999999988764 9999999999999999999999 899999999999999999999999999997765
Q ss_pred CCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHH
Q 006522 505 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAF 584 (642)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~ 584 (642)
... -.++.||++.|.+||+..+...-++..|-||+||+||.|+.|..||++ .+...+++++.
T Consensus 205 ~~k-------------fLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG-----~Dhk~lvrQIs 266 (668)
T KOG0611|consen 205 DKK-------------FLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDG-----RDHKRLVRQIS 266 (668)
T ss_pred ccc-------------HHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCC-----chHHHHHHHhh
Confidence 432 123679999999999855433447899999999999999999999985 34455666665
Q ss_pred hccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 585 RERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 585 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
++.+.-++ .| ....-++.+++..+|++|-|+.||..
T Consensus 267 ~GaYrEP~--~P------------SdA~gLIRwmLmVNP~RRATieDiAs 302 (668)
T KOG0611|consen 267 RGAYREPE--TP------------SDASGLIRWMLMVNPERRATIEDIAS 302 (668)
T ss_pred cccccCCC--CC------------chHHHHHHHHHhcCcccchhHHHHhh
Confidence 54332111 11 11233888999999999999999875
No 40
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-41 Score=336.54 Aligned_cols=244 Identities=24% Similarity=0.410 Sum_probs=200.3
Q ss_pred cccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEeec
Q 006522 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFI 427 (642)
Q Consensus 348 ~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~ 427 (642)
..||+|+||.||+|.+.... +.||+|++.-......++++.+|+.++++++++||.++|+.+..+...+++||||
T Consensus 19 ~~IgrGsfG~Vyk~~d~~t~-----k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~ 93 (467)
T KOG0201|consen 19 ELIGRGSFGEVYKAIDNKTK-----KVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYC 93 (467)
T ss_pred hhccccccceeeeeeecccc-----ceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHh
Confidence 68999999999999998886 8999999988766666789999999999999999999999999999999999999
Q ss_pred cCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCCC
Q 006522 428 RNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTS 507 (642)
Q Consensus 428 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 507 (642)
.+|++.+.+.... .+++....-|++++..|+.|||+ .+.+|||||+.|||+..+|.+|++|||.+-.+..+.
T Consensus 94 ~gGsv~~lL~~~~-----~~~E~~i~~ilre~l~~l~ylH~---~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~ 165 (467)
T KOG0201|consen 94 GGGSVLDLLKSGN-----ILDEFEIAVILREVLKGLDYLHS---EKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTV 165 (467)
T ss_pred cCcchhhhhccCC-----CCccceeeeehHHHHHHhhhhhh---cceecccccccceeEeccCcEEEEecceeeeeechh
Confidence 9999999998654 24777778899999999999999 799999999999999999999999999998775542
Q ss_pred cccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHhcc
Q 006522 508 KVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRER 587 (642)
Q Consensus 508 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~~~ 587 (642)
. .....+||+.|||||++. ...|+.|+||||+|++.+||++|.+|+....... .+ +-
T Consensus 166 ~------------rr~tfvGTPfwMAPEVI~-~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmr-----vl---fl-- 222 (467)
T KOG0201|consen 166 K------------RRKTFVGTPFWMAPEVIK-QSGYDTKADIWSLGITAIELAKGEPPHSKLHPMR-----VL---FL-- 222 (467)
T ss_pred h------------ccccccccccccchhhhc-cccccchhhhhhhhHHHHHHhcCCCCCcccCcce-----EE---Ee--
Confidence 1 123678999999999965 5789999999999999999999999997543310 00 00
Q ss_pred CCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 588 RPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 588 ~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
++....|.+.... ...+.+++-.|++.||+.||++.++++
T Consensus 223 --Ipk~~PP~L~~~~-----S~~~kEFV~~CL~k~P~~RpsA~~LLK 262 (467)
T KOG0201|consen 223 --IPKSAPPRLDGDF-----SPPFKEFVEACLDKNPEFRPSAKELLK 262 (467)
T ss_pred --ccCCCCCcccccc-----CHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence 1111112222111 123445677799999999999999875
No 41
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=2.4e-39 Score=342.78 Aligned_cols=265 Identities=22% Similarity=0.299 Sum_probs=202.6
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhccc-CCCeeeEEEEEEeCCceEEEE
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ-HPNIVRLKAFYYANDEKLLIS 424 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lv~ 424 (642)
..+.||+|+||.||+|.............||||++.........+.|.+|++++++++ |||||+++++|...+..++||
T Consensus 41 ~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~~~lv~ 120 (400)
T cd05105 41 LGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIIT 120 (400)
T ss_pred hhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCceEEEE
Confidence 3578999999999999875443333346899999976544444478999999999995 999999999999999999999
Q ss_pred eeccCCcHHHHHhcCCCC--------------------------------------------------------------
Q 006522 425 DFIRNGSLYAALHAGPSD-------------------------------------------------------------- 442 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~-------------------------------------------------------------- 442 (642)
||+++|+|.++++.....
T Consensus 121 Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (400)
T cd05105 121 EYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIKEASKY 200 (400)
T ss_pred EecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhhhhhhh
Confidence 999999999998753210
Q ss_pred -----------------------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeE
Q 006522 443 -----------------------------SLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPC 493 (642)
Q Consensus 443 -----------------------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~k 493 (642)
....+++..+..++.|+++||+|||+ .+|+||||||+||++++++.+|
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivH~dikp~Nill~~~~~~k 277 (400)
T cd05105 201 SDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLAS---KNCVHRDLAARNVLLAQGKIVK 277 (400)
T ss_pred hhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChHhEEEeCCCEEE
Confidence 01248899999999999999999999 8999999999999999999999
Q ss_pred EecccccccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCC
Q 006522 494 ISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPEND 572 (642)
Q Consensus 494 l~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~ 572 (642)
|+|||+++......... ......++..|+|||.+. +..++.++|||||||++|||++ |..||.....+
T Consensus 278 L~DfGla~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~-~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~ 346 (400)
T cd05105 278 ICDFGLARDIMHDSNYV----------SKGSTFLPVKWMAPESIF-DNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVD 346 (400)
T ss_pred EEeCCcceecccccccc----------ccCCcCCCcceEChhhhc-CCCCCchhhHHHHHHHHHHHHHCCCCCCcccchh
Confidence 99999998654321100 011234667899999854 4678999999999999999997 99998753222
Q ss_pred cccHHHHHHHHHhcc-CCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhhhc
Q 006522 573 GKGLESLVRKAFRER-RPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 641 (642)
Q Consensus 573 ~~~l~~~~~~~~~~~-~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l~~ 641 (642)
. .......... .+.... ....+.+++.+||+.||++||++.+|+++|+++.+
T Consensus 347 ~----~~~~~~~~~~~~~~~~~-------------~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~ 399 (400)
T cd05105 347 S----TFYNKIKSGYRMAKPDH-------------ATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP 399 (400)
T ss_pred H----HHHHHHhcCCCCCCCcc-------------CCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence 1 1111111111 111111 11345678999999999999999999999998754
No 42
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=2.1e-39 Score=329.83 Aligned_cols=249 Identities=21% Similarity=0.226 Sum_probs=193.8
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC--ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 424 (642)
.+.||+|+||.||++....++ +.||||.+.... .......+.+|+.++++++|+||+++++++...+..++||
T Consensus 5 ~~~lg~G~~g~V~~~~~~~~~-----~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~ 79 (285)
T cd05631 5 YRVLGKGGFGEVCACQVRATG-----KMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVL 79 (285)
T ss_pred EEEEecCCCEEEEEEEEecCC-----ceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEE
Confidence 467999999999999987665 899999987542 1222356789999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCC
Q 006522 425 DFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLP 504 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 504 (642)
||+++|+|.+++..... ..+++..+..++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++...
T Consensus 80 e~~~~g~L~~~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~---~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~ 153 (285)
T cd05631 80 TIMNGGDLKFHIYNMGN---PGFDEQRAIFYAAELCCGLEDLQR---ERIVYRDLKPENILLDDRGHIRISDLGLAVQIP 153 (285)
T ss_pred EecCCCcHHHHHHhhCC---CCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcC
Confidence 99999999988865432 248999999999999999999999 899999999999999999999999999987653
Q ss_pred CCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHH
Q 006522 505 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAF 584 (642)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~ 584 (642)
.... .....||..|+|||++. +..++.++|||||||++|||+||+.||....... ..........
T Consensus 154 ~~~~-------------~~~~~g~~~y~aPE~~~-~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~-~~~~~~~~~~ 218 (285)
T cd05631 154 EGET-------------VRGRVGTVGYMAPEVIN-NEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERV-KREEVDRRVK 218 (285)
T ss_pred CCCe-------------ecCCCCCCCccCHhhhc-CCCCCcccCchhHHHHHHHHHhCCCCCCCCCcch-hHHHHHHHhh
Confidence 2210 11346788999999855 4788999999999999999999999997543211 1111111111
Q ss_pred hccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCC-----HHHHHH
Q 006522 585 RERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPR-----MRTVSE 634 (642)
Q Consensus 585 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs-----~~ev~~ 634 (642)
.........+++ .+.+++.+||+.||++||+ +.|+++
T Consensus 219 ~~~~~~~~~~s~-------------~~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 219 EDQEEYSEKFSE-------------DAKSICRMLLTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred cccccCCccCCH-------------HHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence 111111112222 3456888899999999997 777765
No 43
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=5.8e-39 Score=326.27 Aligned_cols=261 Identities=26% Similarity=0.398 Sum_probs=203.3
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
...||+|+||.||+|.............|++|.+..........+|.+|+.++++++||||+++++++...+..+++|||
T Consensus 10 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~ 89 (283)
T cd05048 10 LEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCMLFEY 89 (283)
T ss_pred hhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceEEEEec
Confidence 46799999999999998765444445789999997654444446799999999999999999999999998899999999
Q ss_pred ccCCcHHHHHhcCCCCC-----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEe
Q 006522 427 IRNGSLYAALHAGPSDS-----------LPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCIS 495 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~-----------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~ 495 (642)
+++|+|.+++....... ...+++..+..++.|++.||+|||+ .+++||||||+||++++++.+||+
T Consensus 90 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~---~~i~H~dlkp~Nil~~~~~~~~L~ 166 (283)
T cd05048 90 LAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSS---HHFVHRDLAARNCLVGEGLTVKIS 166 (283)
T ss_pred CCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccccceEEEcCCCcEEEC
Confidence 99999999997643211 1358899999999999999999999 899999999999999999999999
Q ss_pred cccccccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcc
Q 006522 496 GFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGK 574 (642)
Q Consensus 496 DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~ 574 (642)
|||+++......... ......+++.|+|||.+.. ..++.++|||||||++|||+| |..||.+...
T Consensus 167 dfg~~~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~-~~~~~~sDv~slG~il~el~~~g~~p~~~~~~--- 232 (283)
T cd05048 167 DFGLSRDIYSADYYR----------VQSKSLLPVRWMPPEAILY-GKFTTESDIWSFGVVLWEIFSYGLQPYYGFSN--- 232 (283)
T ss_pred CCcceeecccccccc----------ccCCCcccccccCHHHhcc-CcCchhhhHHHHHHHHHHHHcCCCCCCCCCCH---
Confidence 999997653321100 0112345678999998554 678999999999999999998 9999975322
Q ss_pred cHHHHHHHHHhccC-CCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhh
Q 006522 575 GLESLVRKAFRERR-PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 639 (642)
Q Consensus 575 ~l~~~~~~~~~~~~-~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l 639 (642)
.+.......... +.+.. ...++.+++.+||+.||++||++.||++.|+++
T Consensus 233 --~~~~~~i~~~~~~~~~~~-------------~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05048 233 --QEVIEMIRSRQLLPCPED-------------CPARVYALMIECWNEIPARRPRFKDIHTRLRSW 283 (283)
T ss_pred --HHHHHHHHcCCcCCCccc-------------CCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence 122222221111 11111 123456788999999999999999999999863
No 44
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=1.8e-39 Score=336.15 Aligned_cols=242 Identities=22% Similarity=0.308 Sum_probs=193.4
Q ss_pred ccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC--ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 349 ~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
+||+|+||.||++.....+ +.||+|.+.... .......+.+|+.++++++||||+++++++...+..++||||
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~ 76 (323)
T cd05595 2 LLGKGTFGKVILVREKATG-----RYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEY 76 (323)
T ss_pred eeeeCCCEEEEEEEECCCC-----CEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeC
Confidence 6899999999999987664 899999997541 222346678899999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCC
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 506 (642)
+++|+|.+++.... .+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++.....
T Consensus 77 ~~~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~ 148 (323)
T cd05595 77 ANGGELFFHLSRER-----VFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD 148 (323)
T ss_pred CCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHEEEcCCCCEEecccHHhccccCC
Confidence 99999999987543 48999999999999999999999 89999999999999999999999999998753221
Q ss_pred CcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHhc
Q 006522 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE 586 (642)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~~ 586 (642)
.. ......||+.|+|||++. +..++.++|||||||++|||+||+.||..... ..........
T Consensus 149 ~~------------~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~-----~~~~~~~~~~ 210 (323)
T cd05595 149 GA------------TMKTFCGTPEYLAPEVLE-DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-----ERLFELILME 210 (323)
T ss_pred CC------------ccccccCCcCcCCccccc-CCCCCchhchhhhHHHHHHHHhCCCCCCCCCH-----HHHHHHHhcC
Confidence 10 011346888999999854 46789999999999999999999999974321 2233333333
Q ss_pred cCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCC-----CHHHHHH
Q 006522 587 RRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRP-----RMRTVSE 634 (642)
Q Consensus 587 ~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----s~~ev~~ 634 (642)
...++..+++. +.+++.+||+.||++|| ++.++++
T Consensus 211 ~~~~p~~~~~~-------------~~~li~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 211 EIRFPRTLSPE-------------AKSLLAGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred CCCCCCCCCHH-------------HHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence 33333333433 34577789999999998 7887764
No 45
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=2.1e-39 Score=336.31 Aligned_cols=243 Identities=20% Similarity=0.274 Sum_probs=194.7
Q ss_pred cccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC--ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEe
Q 006522 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 348 ~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
+.||+|+||.||++.....+ +.||+|.+.... .......+.+|+.++++++||||+++++++...+..++|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~-----~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~E 75 (328)
T cd05593 1 KLLGKGTFGKVILVREKASG-----KYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVME 75 (328)
T ss_pred CeeeeCCCEEEEEEEECCCC-----CEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEe
Confidence 36899999999999987665 899999997542 22334678899999999999999999999999999999999
Q ss_pred eccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCC
Q 006522 426 FIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPG 505 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 505 (642)
|+++|+|.+++.... .+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 76 y~~~g~L~~~l~~~~-----~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~ 147 (328)
T cd05593 76 YVNGGELFFHLSRER-----VFSEDRTRFYGAEIVSALDYLHS---GKIVYRDLKLENLMLDKDGHIKITDFGLCKEGIT 147 (328)
T ss_pred CCCCCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHh---CCeEecccCHHHeEECCCCcEEEecCcCCccCCC
Confidence 999999999987543 48999999999999999999999 8999999999999999999999999999875322
Q ss_pred CCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHh
Q 006522 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR 585 (642)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~ 585 (642)
... ......||+.|+|||++. +..++.++|||||||++|||+||+.||.... ..........
T Consensus 148 ~~~------------~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslGvil~elltG~~Pf~~~~-----~~~~~~~~~~ 209 (328)
T cd05593 148 DAA------------TMKTFCGTPEYLAPEVLE-DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD-----HEKLFELILM 209 (328)
T ss_pred ccc------------ccccccCCcCccChhhhc-CCCCCccCCccccchHHHHHhhCCCCCCCCC-----HHHHHHHhcc
Confidence 110 011346889999999854 4678999999999999999999999997432 2233333333
Q ss_pred ccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCC-----CHHHHHH
Q 006522 586 ERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRP-----RMRTVSE 634 (642)
Q Consensus 586 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----s~~ev~~ 634 (642)
....++..+++. +.+++.+||+.||++|| ++.|+++
T Consensus 210 ~~~~~p~~~~~~-------------~~~li~~~L~~dP~~R~~~~~~~~~~il~ 250 (328)
T cd05593 210 EDIKFPRTLSAD-------------AKSLLSGLLIKDPNKRLGGGPDDAKEIMR 250 (328)
T ss_pred CCccCCCCCCHH-------------HHHHHHHHcCCCHHHcCCCCCCCHHHHhc
Confidence 333333333332 34577889999999997 7888875
No 46
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-40 Score=336.98 Aligned_cols=252 Identities=24% Similarity=0.438 Sum_probs=207.8
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEe
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
....||-|.||.||.|++++.. ..||||.+++. ...+++|+.|+.+|+.++|||+|+|+|.|......|+|.|
T Consensus 271 MkhKLGGGQYGeVYeGvWKkys-----lTvAVKtLKED--tMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTE 343 (1157)
T KOG4278|consen 271 MKHKLGGGQYGEVYEGVWKKYS-----LTVAVKTLKED--TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITE 343 (1157)
T ss_pred eeeccCCCcccceeeeeeeccc-----eeeehhhhhhc--chhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEe
Confidence 4678999999999999999886 89999999864 3456999999999999999999999999999999999999
Q ss_pred eccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCC
Q 006522 426 FIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPG 505 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 505 (642)
||.+|+|.++|++..+. .++--..+.++.||+.||+||.. +.+|||||..+|+|+.++..+||+|||+++.+..
T Consensus 344 fM~yGNLLdYLRecnr~---ev~avvLlyMAtQIsSaMeYLEk---knFIHRDLAARNCLVgEnhiVKvADFGLsRlMtg 417 (1157)
T KOG4278|consen 344 FMCYGNLLDYLRECNRS---EVPAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHIVKVADFGLSRLMTG 417 (1157)
T ss_pred cccCccHHHHHHHhchh---hcchhHHHHHHHHHHHHHHHHHH---hhhhhhhhhhhhccccccceEEeeccchhhhhcC
Confidence 99999999999987653 36667888999999999999998 8999999999999999999999999999999877
Q ss_pred CCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHHH
Q 006522 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAF 584 (642)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~~l~~~~~~~~ 584 (642)
+.+... . ...-...|.|||.+.. ..++.|+|||+|||+|||+.| |-.||.+.+- .....++++.+
T Consensus 418 DTYTAH------A-----GAKFPIKWTAPEsLAy-NtFSiKSDVWAFGVLLWEIATYGMsPYPGidl--SqVY~LLEkgy 483 (1157)
T KOG4278|consen 418 DTYTAH------A-----GAKFPIKWTAPESLAY-NTFSIKSDVWAFGVLLWEIATYGMSPYPGIDL--SQVYGLLEKGY 483 (1157)
T ss_pred Cceecc------c-----CccCcccccCcccccc-cccccchhhHHHHHHHHHHHhcCCCCCCCccH--HHHHHHHhccc
Confidence 643211 1 1123456999998555 778999999999999999999 8899875321 12223333333
Q ss_pred hccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhh
Q 006522 585 RERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 639 (642)
Q Consensus 585 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l 639 (642)
+...+ + .+..++++||+.||++.|.+||+++|+-+.++.|
T Consensus 484 RM~~P--e-------------GCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtm 523 (1157)
T KOG4278|consen 484 RMDGP--E-------------GCPPKVYELMRACWNWSPSDRPSFAEIHQAFETM 523 (1157)
T ss_pred cccCC--C-------------CCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHH
Confidence 33222 1 2334577899999999999999999999999876
No 47
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=1.6e-39 Score=337.48 Aligned_cols=241 Identities=17% Similarity=0.269 Sum_probs=195.1
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC--ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEE
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLI 423 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 423 (642)
..+.||+|+||.||+|.....+ +.||||.+.... .....+.+.+|+.++++++||||+++++++...+..++|
T Consensus 22 ~~~~lg~G~~g~V~~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 96 (329)
T PTZ00263 22 MGETLGTGSFGRVRIAKHKGTG-----EYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFL 96 (329)
T ss_pred EEEEEEecCCeEEEEEEECCCC-----CEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEE
Confidence 3578999999999999987765 789999987542 222346789999999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccC
Q 006522 424 SDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLL 503 (642)
Q Consensus 424 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 503 (642)
|||+++|+|.+++.... .+++.....++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 97 ~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 168 (329)
T PTZ00263 97 LEFVVGGELFTHLRKAG-----RFPNDVAKFYHAELVLAFEYLHS---KDIIYRDLKPENLLLDNKGHVKVTDFGFAKKV 168 (329)
T ss_pred EcCCCCChHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHEEECCCCCEEEeeccCceEc
Confidence 99999999999997653 38889999999999999999999 89999999999999999999999999998765
Q ss_pred CCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHH
Q 006522 504 PGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKA 583 (642)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~ 583 (642)
.... ....||+.|+|||++. +..++.++|||||||++|||+||+.||.+.. .....+..
T Consensus 169 ~~~~---------------~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~elltg~~pf~~~~-----~~~~~~~i 227 (329)
T PTZ00263 169 PDRT---------------FTLCGTPEYLAPEVIQ-SKGHGKAVDWWTMGVLLYEFIAGYPPFFDDT-----PFRIYEKI 227 (329)
T ss_pred CCCc---------------ceecCChhhcCHHHHc-CCCCCCcceeechHHHHHHHHcCCCCCCCCC-----HHHHHHHH
Confidence 3221 1246888999999854 4678999999999999999999999997422 12233333
Q ss_pred HhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCC-----HHHHH
Q 006522 584 FRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPR-----MRTVS 633 (642)
Q Consensus 584 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs-----~~ev~ 633 (642)
......++..+++. +.+++.+||+.||++||+ +.|++
T Consensus 228 ~~~~~~~p~~~~~~-------------~~~li~~~L~~dP~~R~~~~~~~~~~ll 269 (329)
T PTZ00263 228 LAGRLKFPNWFDGR-------------ARDLVKGLLQTDHTKRLGTLKGGVADVK 269 (329)
T ss_pred hcCCcCCCCCCCHH-------------HHHHHHHHhhcCHHHcCCCCCCCHHHHh
Confidence 33333333333332 345888899999999997 56665
No 48
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3e-40 Score=320.80 Aligned_cols=259 Identities=21% Similarity=0.323 Sum_probs=194.7
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCc-----e
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDE-----K 420 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~-----~ 420 (642)
..+++|.|+||.||+|...... ..||||+........ .+|+++|++++|||||++.-+|....+ .
T Consensus 28 ~~~liG~GsFg~Vyq~~~~e~~-----~~vAIKKv~~d~r~k-----nrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~l 97 (364)
T KOG0658|consen 28 AVRLIGSGSFGVVYQAKLRETE-----EEVAIKKVLQDKRYK-----NRELQIMRKLDHPNIVRLLYFFSSSTESDEVYL 97 (364)
T ss_pred eeEEEeecccceEEEEEEcCCC-----ceeEEEEecCCCCcC-----cHHHHHHHhcCCcCeeeEEEEEEecCCCchhHH
Confidence 3578999999999999998875 899999987654322 379999999999999999999876432 3
Q ss_pred EEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCC-CCeEEecccc
Q 006522 421 LLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDE-LHPCISGFGL 499 (642)
Q Consensus 421 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~-~~~kl~DfGl 499 (642)
.+|||||+. +|++.++...... ..++...+.-++.||.+||+|||+ .+|+||||||.|+|+|.+ |.+||||||.
T Consensus 98 nlVleymP~-tL~~~~r~~~~~~-~~mp~~~iKLYt~Qlfrgl~yLh~---~~IcHRDIKPqNlLvD~~tg~LKicDFGS 172 (364)
T KOG0658|consen 98 NLVLEYMPE-TLYRVIRHYTRAN-QRMPLLEIKLYTYQLFRGLAYLHS---HGICHRDIKPQNLLVDPDTGVLKICDFGS 172 (364)
T ss_pred HHHHHhchH-HHHHHHHHHhhcC-CCCceeeeHHHHHHHHHHHHHHHh---cCcccCCCChheEEEcCCCCeEEeccCCc
Confidence 489999998 9999998532111 236667788899999999999999 899999999999999976 9999999999
Q ss_pred cccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHH
Q 006522 500 NRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESL 579 (642)
Q Consensus 500 a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~ 579 (642)
|+.+..... ......|..|+|||.+.+...|+.+.||||.|||+.||+-|++-|.+... ...+..+
T Consensus 173 AK~L~~~ep-------------niSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~-~dQL~eI 238 (364)
T KOG0658|consen 173 AKVLVKGEP-------------NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSS-VDQLVEI 238 (364)
T ss_pred ceeeccCCC-------------ceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCH-HHHHHHH
Confidence 998764421 11334567899999988878899999999999999999999999987332 2233333
Q ss_pred HHHHHhcc---------CCCccccChhhhhch----hHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 580 VRKAFRER---------RPLSEVIDPALVKEI----HAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 580 ~~~~~~~~---------~~~~~~~d~~l~~~~----~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
++ .+..+ ....+.-.|.+.... .......+.++++.+++..+|.+|.++.|++.
T Consensus 239 ik-~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~ 305 (364)
T KOG0658|consen 239 IK-VLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALA 305 (364)
T ss_pred HH-HhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhc
Confidence 32 21110 000111112221111 11123346788999999999999999999874
No 49
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=1e-38 Score=319.47 Aligned_cols=247 Identities=22% Similarity=0.393 Sum_probs=195.2
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
...||+|+||.||++....+ ..+|+|.+...... .++|.+|++++++++||||+++++++...+..++||||
T Consensus 9 ~~~lg~G~~~~vy~~~~~~~------~~~a~K~~~~~~~~--~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~ 80 (256)
T cd05114 9 MKELGSGQFGVVHLGKWRAQ------IKVAIKAINEGAMS--EEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEF 80 (256)
T ss_pred eeEecCCcCceEEEEEeccC------ceEEEEecccCCcc--HHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEc
Confidence 45799999999999988765 68999988754322 36789999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCC
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 506 (642)
+++|+|.++++.... .++|..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||.++.....
T Consensus 81 ~~~~~L~~~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~ 153 (256)
T cd05114 81 MENGCLLNYLRQRQG----KLSKDMLLSMCQDVCEGMEYLER---NSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDD 153 (256)
T ss_pred CCCCcHHHHHHhCcc----CCCHHHHHHHHHHHHHHHHHHHH---CCccccccCcceEEEcCCCeEEECCCCCccccCCC
Confidence 999999999976432 38999999999999999999999 89999999999999999999999999998765322
Q ss_pred CcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHHHh
Q 006522 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFR 585 (642)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~~l~~~~~~~~~ 585 (642)
... . .....++..|+|||+.. +..++.++||||||+++|||+| |+.||.... ....+.....
T Consensus 154 ~~~--------~---~~~~~~~~~y~aPE~~~-~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~-----~~~~~~~i~~ 216 (256)
T cd05114 154 EYT--------S---SSGAKFPVKWSPPEVFN-FSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKS-----NYEVVEMISR 216 (256)
T ss_pred cee--------c---cCCCCCchhhCChhhcc-cCccchhhhhHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHHHHC
Confidence 110 0 01223456799999854 4678999999999999999999 899986432 2223333322
Q ss_pred ccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHH
Q 006522 586 ERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 637 (642)
Q Consensus 586 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~ 637 (642)
..+.. .+... ...+.+++.+||+.+|++||++.|+++.|.
T Consensus 217 ~~~~~----~~~~~--------~~~~~~li~~c~~~~p~~Rps~~~l~~~l~ 256 (256)
T cd05114 217 GFRLY----RPKLA--------SMTVYEVMYSCWHEKPEGRPTFAELLRAIT 256 (256)
T ss_pred CCCCC----CCCCC--------CHHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 22211 11110 124677999999999999999999998873
No 50
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=1.9e-39 Score=328.56 Aligned_cols=253 Identities=21% Similarity=0.277 Sum_probs=195.3
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC--ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 424 (642)
-..||+|+||.||.|+.++++ ..+|+|++++.. ...+++.++.|-.+|...++|+||+|+..|++.+..||||
T Consensus 146 Lk~IgkGAfGeVrLarKk~Tg-----~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLiM 220 (550)
T KOG0605|consen 146 LKVIGKGAFGEVRLARKKDTG-----EIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLIM 220 (550)
T ss_pred heeeccccceeEEEEEEccCC-----cEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEEE
Confidence 478999999999999998886 899999998863 2345678899999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCC
Q 006522 425 DFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLP 504 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 504 (642)
||++|||+..+|...+ .|++.....++.+++.|++-+|. .++|||||||+|+|||..|++||+||||+.-+.
T Consensus 221 EylPGGD~mTLL~~~~-----~L~e~~arfYiaE~vlAI~~iH~---~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~ 292 (550)
T KOG0605|consen 221 EYLPGGDMMTLLMRKD-----TLTEDWARFYIAETVLAIESIHQ---LGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLD 292 (550)
T ss_pred EecCCccHHHHHHhcC-----cCchHHHHHHHHHHHHHHHHHHH---cCcccccCChhheeecCCCCEeeccccccchhh
Confidence 9999999999998765 39999999999999999999999 899999999999999999999999999996443
Q ss_pred CCCcccc---------------cceeee----cC----------------CCcccccCCCcccCccccccCCCCCcccch
Q 006522 505 GTSKVTK---------------NETIVT----SG----------------TGSRISAISNVYLAPEARIYGSKFTQKCDV 549 (642)
Q Consensus 505 ~~~~~~~---------------~~~~~~----~~----------------~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV 549 (642)
....... ...... .. ......+|||-|||||++.. ..|+..+|.
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~-kgY~~~cDw 371 (550)
T KOG0605|consen 293 KKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLG-KGYGKECDW 371 (550)
T ss_pred hhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhc-CCCCccccH
Confidence 2111000 000000 00 00114689999999999665 779999999
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCC
Q 006522 550 YSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPR 628 (642)
Q Consensus 550 ~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs 628 (642)
||+|||+|||+.|.+||......+ ....++.....-..| +..+. ..++.+++.+|+. ||++|.-
T Consensus 372 WSLG~ImyEmLvGyPPF~s~tp~~-T~rkI~nwr~~l~fP--~~~~~-----------s~eA~DLI~rll~-d~~~RLG 435 (550)
T KOG0605|consen 372 WSLGCIMYEMLVGYPPFCSETPQE-TYRKIVNWRETLKFP--EEVDL-----------SDEAKDLITRLLC-DPENRLG 435 (550)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhhhccCC--CcCcc-----------cHHHHHHHHHHhc-CHHHhcC
Confidence 999999999999999998643321 112222211111111 11111 1345678888888 9999975
No 51
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-39 Score=321.94 Aligned_cols=261 Identities=25% Similarity=0.402 Sum_probs=194.9
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHh--cccCCCeeeEEEEEEeCC----ce
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIA--RVQHPNIVRLKAFYYAND----EK 420 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~--~l~H~nIv~l~~~~~~~~----~~ 420 (642)
..++|+|+||.||||.+.. +.||||++...+. ..|..|-+|.+ .++|+||++++++-.... +.
T Consensus 215 ~eli~~Grfg~V~KaqL~~-------~~VAVKifp~~~k----qs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~ey 283 (534)
T KOG3653|consen 215 LELIGRGRFGCVWKAQLDN-------RLVAVKIFPEQEK----QSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEY 283 (534)
T ss_pred HHHhhcCccceeehhhccC-------ceeEEEecCHHHH----HHHHhHHHHHhccCccchhHHHhhchhccCCccccce
Confidence 4679999999999999887 7999999975432 56777777665 458999999999877655 78
Q ss_pred EEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC------CCCceecCCCCCCeeeCCCCCeEE
Q 006522 421 LLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYS------PRKYVHGNIKSTKILLDDELHPCI 494 (642)
Q Consensus 421 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~------~~~iiHrDlkp~NILl~~~~~~kl 494 (642)
+||+||.++|+|.++|..+- ++|....+|+.-+++||+|||+.- .++|+|||||++|||+.+|+++.|
T Consensus 284 wLVt~fh~kGsL~dyL~~nt------isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccI 357 (534)
T KOG3653|consen 284 WLVTEFHPKGSLCDYLKANT------ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCI 357 (534)
T ss_pred eEEeeeccCCcHHHHHHhcc------ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEe
Confidence 99999999999999998754 899999999999999999999843 247999999999999999999999
Q ss_pred ecccccccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCC-----cccchHHHHHHHHHHHhCCCCCC-C
Q 006522 495 SGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFT-----QKCDVYSFGIVLLEILTGRLPDA-G 568 (642)
Q Consensus 495 ~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~-----~~sDV~S~Gvvl~el~tG~~P~~-~ 568 (642)
+|||+|..+...... .....-+||.+|||||++.+.-.+. .+.||||+|.|||||+++-.-++ +
T Consensus 358 aDFGLAl~~~p~~~~----------~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~ 427 (534)
T KOG3653|consen 358 ADFGLALRLEPGKPQ----------GDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPG 427 (534)
T ss_pred eccceeEEecCCCCC----------cchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCC
Confidence 999999887644211 1112358999999999854322222 47899999999999999643332 1
Q ss_pred C-----------CCCcccHHHHHHHHHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHH
Q 006522 569 P-----------ENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 637 (642)
Q Consensus 569 ~-----------~~~~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~ 637 (642)
+ -.....+.+......+++.. |.+.+.......+..+.+.+-.||+.||+.|.|+.-|.+++.
T Consensus 428 ~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~R------P~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~ 501 (534)
T KOG3653|consen 428 PVPEYQLPFEAEVGNHPTLEEMQELVVRKKQR------PKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMA 501 (534)
T ss_pred CCCcccCchhHHhcCCCCHHHHHHHHHhhccC------CCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHH
Confidence 1 11112233333333333221 111111122234556777888999999999999999999888
Q ss_pred hhh
Q 006522 638 RVK 640 (642)
Q Consensus 638 ~l~ 640 (642)
++.
T Consensus 502 ~l~ 504 (534)
T KOG3653|consen 502 ELM 504 (534)
T ss_pred HHh
Confidence 774
No 52
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=1.6e-39 Score=331.63 Aligned_cols=241 Identities=20% Similarity=0.243 Sum_probs=194.8
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC--ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 424 (642)
...||+|+||.||++....++ +.||+|++.... .....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 6 ~~~lg~G~~g~Vy~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 6 IKTVGTGTFGRVHLVRDRISE-----HYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred eeeeecCCCeEEEEEEEcCCC-----CEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 467999999999999988665 889999986532 1223367889999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCC
Q 006522 425 DFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLP 504 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 504 (642)
||+++|+|.+++...+ .+++.....++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++...
T Consensus 81 e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~ 152 (291)
T cd05612 81 EYVPGGELFSYLRNSG-----RFSNSTGLFYASEIVCALEYLHS---KEIVYRDLKPENILLDKEGHIKLTDFGFAKKLR 152 (291)
T ss_pred eCCCCCCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEEEecCcchhcc
Confidence 9999999999997643 38899999999999999999999 899999999999999999999999999987653
Q ss_pred CCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHH
Q 006522 505 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAF 584 (642)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~ 584 (642)
.. .....||+.|+|||++. +..++.++|||||||++|||+||+.||.... .........
T Consensus 153 ~~---------------~~~~~gt~~y~aPE~~~-~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~-----~~~~~~~i~ 211 (291)
T cd05612 153 DR---------------TWTLCGTPEYLAPEVIQ-SKGHNKAVDWWALGILIYEMLVGYPPFFDDN-----PFGIYEKIL 211 (291)
T ss_pred CC---------------cccccCChhhcCHHHHc-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHH
Confidence 22 11345788999999854 4678999999999999999999999997532 223333333
Q ss_pred hccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCC-----HHHHHH
Q 006522 585 RERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPR-----MRTVSE 634 (642)
Q Consensus 585 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs-----~~ev~~ 634 (642)
.....++..+++. +.+++.+||+.||.+||+ +.|+++
T Consensus 212 ~~~~~~~~~~~~~-------------~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 253 (291)
T cd05612 212 AGKLEFPRHLDLY-------------AKDLIKKLLVVDRTRRLGNMKNGADDVKN 253 (291)
T ss_pred hCCcCCCccCCHH-------------HHHHHHHHcCCCHHHccCCccCCHHHHhc
Confidence 3333333333332 345888899999999995 777664
No 53
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=7.7e-39 Score=326.18 Aligned_cols=261 Identities=17% Similarity=0.230 Sum_probs=193.7
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
...||+|+||.||++....++ ..||+|.++..........+.+|+.++++++||||+++++++...+..++||||
T Consensus 10 ~~~lg~G~~g~Vy~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (288)
T cd07871 10 LDKLGEGTYATVFKGRSKLTE-----NLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY 84 (288)
T ss_pred eeEEecCCCEEEEEEEECCCC-----CEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence 467999999999999987665 789999987543333336788999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCC
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 506 (642)
+++ +|.+++..... .+++..+..++.||+.||+|||+ .+|+||||||+|||+++++.+||+|||+++.....
T Consensus 85 ~~~-~l~~~l~~~~~----~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~ 156 (288)
T cd07871 85 LDS-DLKQYLDNCGN----LMSMHNVKIFMFQLLRGLSYCHK---RKILHRDLKPQNLLINEKGELKLADFGLARAKSVP 156 (288)
T ss_pred CCc-CHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEECcCcceeeccCC
Confidence 975 99999875432 47899999999999999999999 89999999999999999999999999998754322
Q ss_pred CcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHhc
Q 006522 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE 586 (642)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~~ 586 (642)
.. ......|++.|+|||++.....++.++||||+||++|||+||+.||...... ..+.... .....
T Consensus 157 ~~------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~-~~~~~~~-~~~~~ 222 (288)
T cd07871 157 TK------------TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVK-EELHLIF-RLLGT 222 (288)
T ss_pred Cc------------cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHH-HHhCC
Confidence 10 0112356788999998665567899999999999999999999999753221 1111111 11110
Q ss_pred cCC--Cccc---------cChhhhhch---hHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 587 RRP--LSEV---------IDPALVKEI---HAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 587 ~~~--~~~~---------~d~~l~~~~---~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
... .... ..+...... .......++.+++.+|++.||.+|||++|+++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 223 PTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred CChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 000 0000 000000000 00001235678999999999999999999975
No 54
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1e-39 Score=298.27 Aligned_cols=245 Identities=22% Similarity=0.325 Sum_probs=201.7
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC--ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEE
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLI 423 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 423 (642)
.++.||+|.||.||.++.+++. -.||+|++.+.. ......++.+|++|-+.|+||||.++|+||.+....||+
T Consensus 26 igr~LgkgkFG~vYlarekks~-----~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi 100 (281)
T KOG0580|consen 26 IGRPLGKGKFGNVYLAREKKSL-----FIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI 100 (281)
T ss_pred ccccccCCccccEeEeeeccCC-----cEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence 4688999999999999998876 799999997652 122237889999999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccC
Q 006522 424 SDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLL 503 (642)
Q Consensus 424 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 503 (642)
+||.++|+++..|.+.... .+++.....++.|+|.||.|+|. ++||||||||+|+|++..+..|++|||.+-..
T Consensus 101 lEya~~gel~k~L~~~~~~---~f~e~~~a~Yi~q~A~Al~y~h~---k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~ 174 (281)
T KOG0580|consen 101 LEYAPRGELYKDLQEGRMK---RFDEQRAATYIKQLANALLYCHL---KRVIHRDIKPENLLLGSAGELKIADFGWSVHA 174 (281)
T ss_pred EEecCCchHHHHHHhcccc---cccccchhHHHHHHHHHHHHhcc---CCcccCCCCHHHhccCCCCCeeccCCCceeec
Confidence 9999999999999865542 48888889999999999999999 89999999999999999999999999987543
Q ss_pred CCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHH
Q 006522 504 PGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKA 583 (642)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~ 583 (642)
+. ....+.+||.-|.+||. ..+..++...|+|++||+.||++.|.+||.... ..+..+++
T Consensus 175 p~--------------~kR~tlcgt~dyl~pEm-v~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~-----~~etYkrI 234 (281)
T KOG0580|consen 175 PS--------------NKRKTLCGTLDYLPPEM-VEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS-----HSETYKRI 234 (281)
T ss_pred CC--------------CCceeeecccccCCHhh-cCCCCccchhhHHHHHHHHHHHHhcCCchhhhh-----hHHHHHHH
Confidence 21 12336789999999998 556889999999999999999999999997543 12223333
Q ss_pred HhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 584 FRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 584 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
..-+..++..+.. .+.+++.+|+..+|.+|.+..|+++
T Consensus 235 ~k~~~~~p~~is~-------------~a~dlI~~ll~~~p~~r~~l~~v~~ 272 (281)
T KOG0580|consen 235 RKVDLKFPSTISG-------------GAADLISRLLVKNPIERLALTEVMD 272 (281)
T ss_pred HHccccCCcccCh-------------hHHHHHHHHhccCccccccHHHHhh
Confidence 3323223333333 2345888899999999999999875
No 55
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=5.9e-39 Score=329.59 Aligned_cols=262 Identities=18% Similarity=0.228 Sum_probs=193.5
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
...||+|+||.||+|.....+ +.||||.+...........+.+|+.++++++||||+++++++...+..++||||
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (303)
T cd07869 10 LEKLGEGSYATVYKGKSKVNG-----KLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEY 84 (303)
T ss_pred eeeEEecCCEEEEEEEECCCC-----CEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEEC
Confidence 467999999999999987654 789999987654333335678999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCC
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 506 (642)
++ ++|.+++..... .+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++.....
T Consensus 85 ~~-~~l~~~~~~~~~----~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 156 (303)
T cd07869 85 VH-TDLCQYMDKHPG----GLHPENVKLFLFQLLRGLSYIHQ---RYILHRDLKPQNLLISDTGELKLADFGLARAKSVP 156 (303)
T ss_pred CC-cCHHHHHHhCCC----CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECCCCcceeccCC
Confidence 96 688888875432 48889999999999999999999 89999999999999999999999999998754321
Q ss_pred CcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHhc
Q 006522 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE 586 (642)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~~ 586 (642)
.. ......||+.|+|||++.....++.++||||+||++|||+||+.||.+.......+..... ....
T Consensus 157 ~~------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~-~~~~ 223 (303)
T cd07869 157 SH------------TYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFL-VLGT 223 (303)
T ss_pred Cc------------cCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHH-HhCC
Confidence 10 0113457888999998655456889999999999999999999999754321111111111 1100
Q ss_pred cCC--C-----ccccChh---------hhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 587 RRP--L-----SEVIDPA---------LVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 587 ~~~--~-----~~~~d~~---------l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
... . ....++. +............+.+++.+|++.||++|||+.|+++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 224 PNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred CChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 000 0 0000000 0000000001134668999999999999999999985
No 56
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.6e-39 Score=330.48 Aligned_cols=247 Identities=20% Similarity=0.315 Sum_probs=207.6
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCcc-ccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCc-eEEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT-WRFKDFESEVEAIARVQHPNIVRLKAFYYANDE-KLLIS 424 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~-~~lv~ 424 (642)
.+.+|+|+||.++.++.+... +.+++|.+.-.... ...+...+|+.++++++|||||.+.+.|..++. .++||
T Consensus 9 ~~~iG~GafG~a~lvrhk~~~-----~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 9 LRQVGRGAFGSALLVRHKSDD-----KLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred hhhcCccccchhhhhhhccCC-----ceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 467999999999999888776 78999998765322 223578899999999999999999999999988 99999
Q ss_pred eeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCC
Q 006522 425 DFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLP 504 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 504 (642)
+|++||++.+.+.+.+. ..++++++.+|+.|++.|+.|||+ ..|+|||||+.||++..+..+||+|||+|+.+.
T Consensus 84 ~Y~eGg~l~~~i~~~k~---~~f~E~~i~~~~~Q~~~av~ylH~---~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~ 157 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQKG---VLFPEERILKWFVQILLAVNYLHE---NRVLHRDLKCANIFLTKDKKVKLGDFGLAKILN 157 (426)
T ss_pred eecCCCCHHHHHHHHhh---ccccHHHHHHHHHHHHHHHHHHHh---hhhhcccchhhhhhccccCceeecchhhhhhcC
Confidence 99999999999987663 259999999999999999999998 899999999999999999999999999999886
Q ss_pred CCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHH
Q 006522 505 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAF 584 (642)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~ 584 (642)
.... ...+.+||+.||.||. ..+..|+.|+||||+||++|||++-+.+|.. .++...+.+..
T Consensus 158 ~~~~------------~a~tvvGTp~YmcPEi-l~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a-----~~m~~Li~ki~ 219 (426)
T KOG0589|consen 158 PEDS------------LASTVVGTPYYMCPEI-LSDIPYNEKSDIWSLGCCLYEMCTLKPAFKA-----SNMSELILKIN 219 (426)
T ss_pred Cchh------------hhheecCCCcccCHHH-hCCCCCCccCcchhhcchHHHHHhcccccCc-----cchHHHHHHHh
Confidence 5421 1225689999999998 5558999999999999999999999999974 34566666666
Q ss_pred hcc-CCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 006522 585 RER-RPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSES 635 (642)
Q Consensus 585 ~~~-~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~ 635 (642)
+.. .+++.....++.. ++..|+..+|+.||++.+++.+
T Consensus 220 ~~~~~Plp~~ys~el~~-------------lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 220 RGLYSPLPSMYSSELRS-------------LVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred hccCCCCCccccHHHHH-------------HHHHHhhcCCccCCCHHHHhhC
Confidence 554 4445555554433 5666999999999999999875
No 57
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=3.8e-39 Score=323.08 Aligned_cols=254 Identities=30% Similarity=0.503 Sum_probs=191.8
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
...||.|.||.||+|.... ........|+||.++........++|.+|++.+++++||||++++|++...+..++|+||
T Consensus 4 ~~~ig~G~fg~v~~~~~~~-~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~ 82 (259)
T PF07714_consen 4 IKQIGEGSFGKVYRAEWKQ-KDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY 82 (259)
T ss_dssp EEEEEEESSEEEEEEEEES-TTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred eeEEccCCCcEEEEEEEEc-ccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence 4679999999999999983 122334889999997654444458899999999999999999999999988889999999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCC
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 506 (642)
+++|+|.++|+.... ..+++..+..|+.|||+||+|||+ .+++|+||+++||++++++.+||+|||+++.....
T Consensus 83 ~~~g~L~~~L~~~~~---~~~~~~~~~~i~~~i~~~l~~Lh~---~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~ 156 (259)
T PF07714_consen 83 CPGGSLDDYLKSKNK---EPLSEQQRLSIAIQIAEALSYLHS---NNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEK 156 (259)
T ss_dssp -TTEBHHHHHHHTCT---TTSBHHHHHHHHHHHHHHHHHHHH---TTEEEST-SGGGEEEETTTEEEEESTTTGEETTTS
T ss_pred ccccccccccccccc---cccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccc
Confidence 999999999998722 249999999999999999999999 89999999999999999999999999999876322
Q ss_pred CcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHHHh
Q 006522 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFR 585 (642)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~~l~~~~~~~~~ 585 (642)
..... .....+...|+|||.+.. ..++.++||||||+++|||+| |+.||... ....+......
T Consensus 157 ~~~~~----------~~~~~~~~~~~aPE~~~~-~~~~~ksDVysfG~~l~ei~~~~~~p~~~~-----~~~~~~~~~~~ 220 (259)
T PF07714_consen 157 SKYKN----------DSSQQLPLRYLAPEVLKD-GEYTKKSDVYSFGMLLYEILTLGKFPFSDY-----DNEEIIEKLKQ 220 (259)
T ss_dssp SSEEE----------STTSESGGGGS-HHHHHH-SEESHHHHHHHHHHHHHHHHTTSSGTTTTS-----CHHHHHHHHHT
T ss_pred ccccc----------cccccccccccccccccc-cccccccccccccccccccccccccccccc-----ccccccccccc
Confidence 21100 012234567999998544 668999999999999999999 78888643 22333333322
Q ss_pred ccC-CCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHH
Q 006522 586 ERR-PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESL 636 (642)
Q Consensus 586 ~~~-~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L 636 (642)
... +....++ ..+.+++..||+.||++||+|.|+++.|
T Consensus 221 ~~~~~~~~~~~-------------~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 221 GQRLPIPDNCP-------------KDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp TEETTSBTTSB-------------HHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred cccceeccchh-------------HHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 221 1111122 2345688889999999999999999886
No 58
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=1.6e-38 Score=328.41 Aligned_cols=256 Identities=22% Similarity=0.382 Sum_probs=197.4
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEe
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
..+.||+|+||.||+|.....+ ......||+|.++........++|.+|+.+++.++||||++++|+|... ..++|+|
T Consensus 11 ~~~~lg~G~~g~Vy~~~~~~~~-~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~v~e 88 (316)
T cd05108 11 KIKVLGSGAFGTVYKGLWIPEG-EKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQ 88 (316)
T ss_pred eeeeeecCCCceEEEEEEecCC-CccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Cceeeee
Confidence 3478999999999999875542 1222469999987654444457899999999999999999999999864 5789999
Q ss_pred eccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCC
Q 006522 426 FIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPG 505 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 505 (642)
|+++|+|.++++.... .+++..++.++.||+.||+|||+ .+|+||||||+||++++++.+||+|||+++....
T Consensus 89 ~~~~g~l~~~l~~~~~----~~~~~~~~~~~~qi~~~L~~LH~---~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~ 161 (316)
T cd05108 89 LMPFGCLLDYVREHKD----NIGSQYLLNWCVQIAKGMNYLEE---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 161 (316)
T ss_pred cCCCCCHHHHHHhccc----cCCHHHHHHHHHHHHHHHHHHHh---cCeeccccchhheEecCCCcEEEccccccccccC
Confidence 9999999999986542 48899999999999999999999 8999999999999999999999999999987643
Q ss_pred CCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHHH
Q 006522 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAF 584 (642)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~~l~~~~~~~~ 584 (642)
..... . .....++..|+|||++. +..++.++|||||||++|||+| |+.||.+... ..+.. ..
T Consensus 162 ~~~~~-------~---~~~~~~~~~y~apE~~~-~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~-----~~~~~-~~ 224 (316)
T cd05108 162 DEKEY-------H---AEGGKVPIKWMALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-----SEISS-IL 224 (316)
T ss_pred CCcce-------e---ccCCccceeecChHHhc-cCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH-----HHHHH-HH
Confidence 32110 0 01123456799999854 4778999999999999999998 9999875321 12211 12
Q ss_pred hccC--CCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhhh
Q 006522 585 RERR--PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 640 (642)
Q Consensus 585 ~~~~--~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l~ 640 (642)
.... +.....+ ..+.+++.+||+.+|++||++.+++..|..+.
T Consensus 225 ~~~~~~~~~~~~~-------------~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~ 269 (316)
T cd05108 225 EKGERLPQPPICT-------------IDVYMIMVKCWMIDADSRPKFRELIIEFSKMA 269 (316)
T ss_pred hCCCCCCCCCCCC-------------HHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 1111 1111111 23566889999999999999999999998774
No 59
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=2.5e-38 Score=322.77 Aligned_cols=262 Identities=26% Similarity=0.390 Sum_probs=202.4
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
...||+|+||.||+|......+......+++|.+.........+++.+|+.++++++||||+++++++...+..++|+||
T Consensus 5 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 84 (290)
T cd05045 5 GKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLIVEY 84 (290)
T ss_pred cccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEEEEe
Confidence 46799999999999998654444445789999987654444457899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcCCC-------------------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeC
Q 006522 427 IRNGSLYAALHAGPS-------------------DSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLD 487 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~-------------------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~ 487 (642)
+.+|+|.+++..... ....++++..++.++.|++.||+|||+ .+++||||||+||+++
T Consensus 85 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~---~~ivH~dikp~nill~ 161 (290)
T cd05045 85 AKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAE---MKLVHRDLAARNVLVA 161 (290)
T ss_pred cCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHH---CCeehhhhhhheEEEc
Confidence 999999999865321 112358999999999999999999999 8999999999999999
Q ss_pred CCCCeEEecccccccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCC
Q 006522 488 DELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPD 566 (642)
Q Consensus 488 ~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~ 566 (642)
+++.+||+|||+++......... ......++..|+|||... +..++.++||||||+++|||+| |+.||
T Consensus 162 ~~~~~kl~dfg~~~~~~~~~~~~----------~~~~~~~~~~y~apE~~~-~~~~~~~~Di~slG~~l~el~t~g~~p~ 230 (290)
T cd05045 162 EGRKMKISDFGLSRDVYEEDSYV----------KRSKGRIPVKWMAIESLF-DHIYTTQSDVWSFGVLLWEIVTLGGNPY 230 (290)
T ss_pred CCCcEEeccccccccccCccchh----------cccCCCCCccccCHHHHc-cCCcchHhHHHHHHHHHHHHHhcCCCCC
Confidence 99999999999987653322110 011223456799999854 4678999999999999999999 99998
Q ss_pred CCCCCCcccHHHHHHHHHhc-cCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhhh
Q 006522 567 AGPENDGKGLESLVRKAFRE-RRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 640 (642)
Q Consensus 567 ~~~~~~~~~l~~~~~~~~~~-~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l~ 640 (642)
.+.. ...++...... ..+..... ...+.+++.+||+.+|++||++.|+++.|+++-
T Consensus 231 ~~~~-----~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~ 287 (290)
T cd05045 231 PGIA-----PERLFNLLKTGYRMERPENC-------------SEEMYNLMLTCWKQEPDKRPTFADISKELEKMM 287 (290)
T ss_pred CCCC-----HHHHHHHHhCCCCCCCCCCC-------------CHHHHHHHHHHccCCcccCCCHHHHHHHHHHHH
Confidence 6432 12222221111 11111111 124567899999999999999999999999873
No 60
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=1.4e-38 Score=331.15 Aligned_cols=264 Identities=23% Similarity=0.359 Sum_probs=200.6
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcc-cCCCeeeEEEEEEeC-CceEEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYAN-DEKLLIS 424 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~-~~~~lv~ 424 (642)
.+.||+|+||.||+|...........+.||+|+++........+.+.+|+.++.++ +|+||++++++|... ...+++|
T Consensus 12 ~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~~~~v~ 91 (337)
T cd05054 12 GKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 91 (337)
T ss_pred hcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCCEEEEE
Confidence 57899999999999986554333444799999997654333346788999999999 899999999988765 4678999
Q ss_pred eeccCCcHHHHHhcCCCC--------------------------------------------------------CCCCCC
Q 006522 425 DFIRNGSLYAALHAGPSD--------------------------------------------------------SLPPLP 448 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~--------------------------------------------------------~~~~l~ 448 (642)
||+++|+|.+++...... ...+++
T Consensus 92 ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 171 (337)
T cd05054 92 EYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYKEPLT 171 (337)
T ss_pred ecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHhhcCCC
Confidence 999999999998653210 012589
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCCCcccccceeeecCCCcccccCC
Q 006522 449 WEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAIS 528 (642)
Q Consensus 449 ~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~gt 528 (642)
|..+.+++.||+.||+|||+ .+|+||||||+||++++++.+||+|||+++.+....... ......++
T Consensus 172 ~~~~~~~~~qi~~aL~~lH~---~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~----------~~~~~~~~ 238 (337)
T cd05054 172 LEDLISYSFQVARGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYV----------RKGDARLP 238 (337)
T ss_pred HHHHHHHHHHHHHHHHHHHh---CCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchh----------hccCCCCC
Confidence 99999999999999999999 899999999999999999999999999998764322110 01123456
Q ss_pred CcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHHHhccCCCccccChhhhhchhHHHH
Q 006522 529 NVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQ 607 (642)
Q Consensus 529 ~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 607 (642)
..|+|||++.. ..++.++|||||||++|||+| |+.||.+..... .+. ........ ... +. ..
T Consensus 239 ~~y~aPE~~~~-~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~-~~~----~~~~~~~~--~~~-~~--------~~ 301 (337)
T cd05054 239 LKWMAPESIFD-KVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE-EFC----RRLKEGTR--MRA-PE--------YA 301 (337)
T ss_pred ccccCcHHhcC-CCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH-HHH----HHHhccCC--CCC-Cc--------cC
Confidence 67999998544 789999999999999999998 999997532221 111 11111111 000 10 11
Q ss_pred HHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhhh
Q 006522 608 VLATFHIALNCTELDPEFRPRMRTVSESLDRVK 640 (642)
Q Consensus 608 ~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l~ 640 (642)
..++.+++.+||+.+|++||++.|+++.|+.+-
T Consensus 302 ~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~ 334 (337)
T cd05054 302 TPEIYSIMLDCWHNNPEDRPTFSELVEILGDLL 334 (337)
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 134677899999999999999999999999874
No 61
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-39 Score=334.90 Aligned_cols=239 Identities=21% Similarity=0.334 Sum_probs=198.1
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC--ccccHHHHHHHHHHHhcc-cCCCeeeEEEEEEeCCceEE
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLL 422 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~l 422 (642)
.-.+||+|.||+|+.+..+..+ +.+|||.+++.. ..+.++....|..|+... +||.++.++.+|++.++.|+
T Consensus 372 ~l~vLGkGsFGkV~lae~k~~~-----e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~f 446 (694)
T KOG0694|consen 372 LLAVLGRGSFGKVLLAELKGTN-----EYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFF 446 (694)
T ss_pred EEEEeccCcCceEEEEEEcCCC-----cEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEE
Confidence 4579999999999999998876 899999999873 234568888999998888 69999999999999999999
Q ss_pred EEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEeccccccc
Q 006522 423 ISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRL 502 (642)
Q Consensus 423 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 502 (642)
||||+.|||+..+.+.. .|++.....++.+|+.||+|||+ ++||+||||.+|||||.+|.+||+|||+++.
T Consensus 447 vmey~~Ggdm~~~~~~~------~F~e~rarfyaAev~l~L~fLH~---~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe 517 (694)
T KOG0694|consen 447 VMEYVAGGDLMHHIHTD------VFSEPRARFYAAEVVLGLQFLHE---NGIIYRDLKLDNLLLDTEGHVKIADFGLCKE 517 (694)
T ss_pred EEEecCCCcEEEEEecc------cccHHHHHHHHHHHHHHHHHHHh---cCceeeecchhheEEcccCcEEecccccccc
Confidence 99999999955544432 39999999999999999999999 8999999999999999999999999999986
Q ss_pred CCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHH
Q 006522 503 LPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRK 582 (642)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~ 582 (642)
.-.. +..+.+.+||+.|||||++. +..|+.++|.|||||+||||++|+.||.+.+. .+....
T Consensus 518 ~m~~------------g~~TsTfCGTpey~aPEil~-e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddE-----ee~Fds 579 (694)
T KOG0694|consen 518 GMGQ------------GDRTSTFCGTPEFLAPEVLT-EQSYTRAVDWWGLGVLLYEMLVGESPFPGDDE-----EEVFDS 579 (694)
T ss_pred cCCC------------CCccccccCChhhcChhhhc-cCcccchhhHHHHHHHHHHHHcCCCCCCCCCH-----HHHHHH
Confidence 4321 12233689999999999954 58999999999999999999999999986433 344555
Q ss_pred HHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCH
Q 006522 583 AFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRM 629 (642)
Q Consensus 583 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~ 629 (642)
+..+....+..++. +.+.++.+.+..+|++|..+
T Consensus 580 I~~d~~~yP~~ls~-------------ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 580 IVNDEVRYPRFLSK-------------EAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred HhcCCCCCCCcccH-------------HHHHHHHHHhccCcccccCC
Confidence 55544443433333 44568888999999999876
No 62
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=5.3e-39 Score=334.34 Aligned_cols=243 Identities=19% Similarity=0.241 Sum_probs=193.8
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC--ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEE
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLI 423 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 423 (642)
....||+|+||.||+|....... ..||+|++.... .....+.+.+|+.+++.++|||||++++++...+..++|
T Consensus 34 ~~~~ig~G~~g~Vy~a~~~~~~~----~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 109 (340)
T PTZ00426 34 FIRTLGTGSFGRVILATYKNEDF----PPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLV 109 (340)
T ss_pred EEEEEeecCCeEEEEEEEECCCC----eEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEE
Confidence 35689999999999998654321 589999986532 222346788999999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccC
Q 006522 424 SDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLL 503 (642)
Q Consensus 424 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 503 (642)
|||+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 110 ~Ey~~~g~L~~~i~~~~-----~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~ 181 (340)
T PTZ00426 110 LEFVIGGEFFTFLRRNK-----RFPNDVGCFYAAQIVLIFEYLQS---LNIVYRDLKPENLLLDKDGFIKMTDFGFAKVV 181 (340)
T ss_pred EeCCCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCeEccCCCHHHEEECCCCCEEEecCCCCeec
Confidence 99999999999997654 38999999999999999999999 89999999999999999999999999999765
Q ss_pred CCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHH
Q 006522 504 PGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKA 583 (642)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~ 583 (642)
... .....||+.|+|||++. +..++.++|||||||++|||+||+.||..... ....+..
T Consensus 182 ~~~---------------~~~~~gt~~y~aPE~~~-~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~-----~~~~~~i 240 (340)
T PTZ00426 182 DTR---------------TYTLCGTPEYIAPEILL-NVGHGKAADWWTLGIFIYEILVGCPPFYANEP-----LLIYQKI 240 (340)
T ss_pred CCC---------------cceecCChhhcCHHHHh-CCCCCccccccchhhHHHHHhcCCCCCCCCCH-----HHHHHHH
Confidence 321 11346888999999854 46789999999999999999999999975321 2223333
Q ss_pred HhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCC-----CHHHHHH
Q 006522 584 FRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRP-----RMRTVSE 634 (642)
Q Consensus 584 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----s~~ev~~ 634 (642)
......++..+++. +.+++.+|++.||++|+ +++|+++
T Consensus 241 ~~~~~~~p~~~~~~-------------~~~li~~~l~~dp~~R~~~~~~~~~~~~~ 283 (340)
T PTZ00426 241 LEGIIYFPKFLDNN-------------CKHLMKKLLSHDLTKRYGNLKKGAQNVKE 283 (340)
T ss_pred hcCCCCCCCCCCHH-------------HHHHHHHHcccCHHHcCCCCCCCHHHHHc
Confidence 33332233333332 34578889999999995 7888764
No 63
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=8.3e-39 Score=331.29 Aligned_cols=246 Identities=20% Similarity=0.286 Sum_probs=193.5
Q ss_pred cccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC---ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEE
Q 006522 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD---ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (642)
Q Consensus 348 ~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 424 (642)
+.||+|+||.||+++...+.. ..+.||||.++... .......+.+|+.++++++||||+++++++..++..|+||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~--~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 79 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGAD--TGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLIL 79 (323)
T ss_pred ceeeecCCeEEEEEEEcccCC--CCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEE
Confidence 468999999999998754321 22789999987531 1222356789999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCC
Q 006522 425 DFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLP 504 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 504 (642)
||+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 80 e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 151 (323)
T cd05584 80 EYLSGGELFMHLEREG-----IFMEDTACFYLSEISLALEHLHQ---QGIIYRDLKPENILLDAQGHVKLTDFGLCKESI 151 (323)
T ss_pred eCCCCchHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCCEEEeeCcCCeecc
Confidence 9999999999997643 37888999999999999999999 899999999999999999999999999987532
Q ss_pred CCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHH
Q 006522 505 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAF 584 (642)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~ 584 (642)
... .......||+.|+|||++.. ..++.++|||||||++|||+||+.||.... .........
T Consensus 152 ~~~------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~G~~pf~~~~-----~~~~~~~~~ 213 (323)
T cd05584 152 HEG------------TVTHTFCGTIEYMAPEILMR-SGHGKAVDWWSLGALMYDMLTGAPPFTAEN-----RKKTIDKIL 213 (323)
T ss_pred cCC------------CcccccCCCccccChhhccC-CCCCCcceecccHHHHHHHhcCCCCCCCCC-----HHHHHHHHH
Confidence 211 01123468899999998544 678899999999999999999999997532 223334444
Q ss_pred hccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCC-----CHHHHHH
Q 006522 585 RERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRP-----RMRTVSE 634 (642)
Q Consensus 585 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----s~~ev~~ 634 (642)
.....++..+++. +.+++.+||+.||++|| ++.++++
T Consensus 214 ~~~~~~~~~~~~~-------------~~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 214 KGKLNLPPYLTPE-------------ARDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred cCCCCCCCCCCHH-------------HHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 4433333333332 34588889999999999 6777654
No 64
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-39 Score=319.34 Aligned_cols=252 Identities=21% Similarity=0.285 Sum_probs=193.9
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCcc-------------ccHHHHHHHHHHHhcccCCCeeeEEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT-------------WRFKDFESEVEAIARVQHPNIVRLKAF 413 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~-------------~~~~~~~~E~~~l~~l~H~nIv~l~~~ 413 (642)
...||+|.||.|-+++....+ +.||+|++.+.... ...+...+||.+|++++|||||+|+++
T Consensus 102 ~~eiG~G~yGkVkLar~~~~~-----~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiEv 176 (576)
T KOG0585|consen 102 IKEIGSGQYGKVKLARDEVDG-----KLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIEV 176 (576)
T ss_pred hhhhcCCccceEEEEeecCCC-----cEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEEe
Confidence 457999999999999988776 89999999764211 123578999999999999999999999
Q ss_pred EEeC--CceEEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCC
Q 006522 414 YYAN--DEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELH 491 (642)
Q Consensus 414 ~~~~--~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~ 491 (642)
..+. +..|||+|||..|.+...= .. .+.+++.+..+|++++..||+|||. ++||||||||+|+||+++|+
T Consensus 177 LDDP~s~~~YlVley~s~G~v~w~p----~d-~~els~~~Ar~ylrDvv~GLEYLH~---QgiiHRDIKPsNLLl~~~g~ 248 (576)
T KOG0585|consen 177 LDDPESDKLYLVLEYCSKGEVKWCP----PD-KPELSEQQARKYLRDVVLGLEYLHY---QGIIHRDIKPSNLLLSSDGT 248 (576)
T ss_pred ecCcccCceEEEEEeccCCccccCC----CC-cccccHHHHHHHHHHHHHHHHHHHh---cCeeccccchhheEEcCCCc
Confidence 8875 5789999999998875321 11 1239999999999999999999999 89999999999999999999
Q ss_pred eEEecccccccCCCCCcccccceeeecCCCcccccCCCcccCccccccCC---CCCcccchHHHHHHHHHHHhCCCCCCC
Q 006522 492 PCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGS---KFTQKCDVYSFGIVLLEILTGRLPDAG 568 (642)
Q Consensus 492 ~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~sDV~S~Gvvl~el~tG~~P~~~ 568 (642)
+||+|||.+.............. ....+||+.|||||....+. ..+.+.||||+||+||-|+.|+.||.+
T Consensus 249 VKIsDFGVs~~~~~~~~~~~d~~-------L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~ 321 (576)
T KOG0585|consen 249 VKISDFGVSNEFPQGSDEGSDDQ-------LSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFD 321 (576)
T ss_pred EEeeccceeeecccCCccccHHH-------HhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCccc
Confidence 99999999987644321111111 11358999999999855522 346789999999999999999999975
Q ss_pred CCCCcccHHHHHHHHHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 569 PENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 569 ~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
. .......++......+++. ++ ....+-+++.++|.+||++|.+..||..
T Consensus 322 ~-----~~~~l~~KIvn~pL~fP~~--pe---------~~e~~kDli~~lL~KdP~~Ri~l~~ik~ 371 (576)
T KOG0585|consen 322 D-----FELELFDKIVNDPLEFPEN--PE---------INEDLKDLIKRLLEKDPEQRITLPDIKL 371 (576)
T ss_pred c-----hHHHHHHHHhcCcccCCCc--cc---------ccHHHHHHHHHHhhcChhheeehhhhee
Confidence 2 3345555555544332221 11 1223456889999999999999988754
No 65
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=4.9e-38 Score=320.31 Aligned_cols=262 Identities=23% Similarity=0.375 Sum_probs=202.6
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEe
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
..+.||+|+||.||++.............+|+|.+..... ...+.+.+|++++++++||||+++++++...+..++|||
T Consensus 9 ~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 87 (288)
T cd05093 9 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASD-NARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFE 87 (288)
T ss_pred eccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCH-HHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEE
Confidence 3567999999999999875533333347799999876432 234679999999999999999999999999999999999
Q ss_pred eccCCcHHHHHhcCCC--------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecc
Q 006522 426 FIRNGSLYAALHAGPS--------DSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGF 497 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~--------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~Df 497 (642)
|+++|+|.+++..... .....+++..+..++.|++.||+|||+ .+++||||||+||++++++.+||+||
T Consensus 88 ~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~---~~i~H~dlkp~Nili~~~~~~kl~df 164 (288)
T cd05093 88 YMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLAS---QHFVHRDLATRNCLVGENLLVKIGDF 164 (288)
T ss_pred cCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccCcceEEEccCCcEEeccC
Confidence 9999999999975432 112358999999999999999999999 89999999999999999999999999
Q ss_pred cccccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcccH
Q 006522 498 GLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGL 576 (642)
Q Consensus 498 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~~l 576 (642)
|+++......... . .....++..|+|||++. +..++.++|||||||++|||+| |+.||.....
T Consensus 165 g~~~~~~~~~~~~-------~---~~~~~~~~~y~aPE~~~-~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~----- 228 (288)
T cd05093 165 GMSRDVYSTDYYR-------V---GGHTMLPIRWMPPESIM-YRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN----- 228 (288)
T ss_pred CccccccCCceee-------c---CCCCCccccccCHHHhc-cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH-----
Confidence 9987654321100 0 01223567799999854 4678999999999999999999 9999864322
Q ss_pred HHHHHHHHhccC-CCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhhh
Q 006522 577 ESLVRKAFRERR-PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 640 (642)
Q Consensus 577 ~~~~~~~~~~~~-~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l~ 640 (642)
............ .....++ ..+.+++.+||+.||.+|||+.|+.+.|+++.
T Consensus 229 ~~~~~~i~~~~~~~~~~~~~-------------~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~ 280 (288)
T cd05093 229 NEVIECITQGRVLQRPRTCP-------------KEVYDLMLGCWQREPHMRLNIKEIHSLLQNLA 280 (288)
T ss_pred HHHHHHHHcCCcCCCCCCCC-------------HHHHHHHHHHccCChhhCCCHHHHHHHHHHHH
Confidence 122222222211 1111111 24567899999999999999999999999875
No 66
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.6e-38 Score=330.29 Aligned_cols=196 Identities=22% Similarity=0.375 Sum_probs=168.3
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
...||+|+||.||++.....+ ..+|+|.+.........+++.+|++++++++||||+++++++...+..++||||
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~-----~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 84 (331)
T cd06649 10 ISELGAGNGGVVTKVQHKPSG-----LIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 84 (331)
T ss_pred EEeecCCCCEEEEEEEECCCC-----cEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeec
Confidence 467999999999999988765 789999987653333346799999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCC
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 506 (642)
+++|+|.+++.... .+++..+..++.|++.||.|||+. .+|+||||||+||+++.++.+||+|||+++.....
T Consensus 85 ~~~~~L~~~l~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~--~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 157 (331)
T cd06649 85 MDGGSLDQVLKEAK-----RIPEEILGKVSIAVLRGLAYLREK--HQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 157 (331)
T ss_pred CCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHhhc--CCEEcCCCChhhEEEcCCCcEEEccCccccccccc
Confidence 99999999997643 388999999999999999999972 36999999999999999999999999998765322
Q ss_pred CcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCC
Q 006522 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGP 569 (642)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~ 569 (642)
. .....||..|+|||++. +..++.++|||||||++|||+||+.||...
T Consensus 158 ~--------------~~~~~g~~~y~aPE~~~-~~~~~~~~DiwslG~il~el~tg~~p~~~~ 205 (331)
T cd06649 158 M--------------ANSFVGTRSYMSPERLQ-GTHYSVQSDIWSMGLSLVELAIGRYPIPPP 205 (331)
T ss_pred c--------------cccCCCCcCcCCHhHhc-CCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence 1 11345788999999854 467899999999999999999999999653
No 67
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=3.3e-38 Score=333.92 Aligned_cols=263 Identities=22% Similarity=0.304 Sum_probs=201.5
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhccc-CCCeeeEEEEEEeCCceEEEE
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ-HPNIVRLKAFYYANDEKLLIS 424 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lv~ 424 (642)
....||+|+||.||+|...........+.||||+++........+.+.+|+++|.++. |||||+++++|...+..++||
T Consensus 41 ~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~~iv~ 120 (401)
T cd05107 41 LGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPIYIIT 120 (401)
T ss_pred hhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCcEEEE
Confidence 4678999999999999976433333347899999986544333467899999999997 999999999999999999999
Q ss_pred eeccCCcHHHHHhcCCC---------------------------------------------------------------
Q 006522 425 DFIRNGSLYAALHAGPS--------------------------------------------------------------- 441 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~--------------------------------------------------------------- 441 (642)
||+++|+|.++++....
T Consensus 121 E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (401)
T cd05107 121 EYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMKGTVK 200 (401)
T ss_pred eccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcchhhhh
Confidence 99999999999975421
Q ss_pred ------------------------------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCC
Q 006522 442 ------------------------------DSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELH 491 (642)
Q Consensus 442 ------------------------------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~ 491 (642)
.....++|...++|+.|++.||+|||+ .+++||||||+|||+++++.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrdlkp~NiLl~~~~~ 277 (401)
T cd05107 201 YADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLAS---KNCVHRDLAARNVLICEGKL 277 (401)
T ss_pred hhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhc---CCcCcccCCcceEEEeCCCE
Confidence 011347888999999999999999998 89999999999999999999
Q ss_pred eEEecccccccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCC
Q 006522 492 PCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPE 570 (642)
Q Consensus 492 ~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~ 570 (642)
+||+|||+++......... ......++..|+|||.+.. ..++.++|||||||++|||++ |+.||....
T Consensus 278 ~kL~DfGla~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvil~e~l~~g~~P~~~~~ 346 (401)
T cd05107 278 VKICDFGLARDIMRDSNYI----------SKGSTFLPLKWMAPESIFN-NLYTTLSDVWSFGILLWEIFTLGGTPYPELP 346 (401)
T ss_pred EEEEecCcceecccccccc----------cCCCcCCCCceeChHHhcC-CCCCcHhHHHHHHHHHHHHHHcCCCCCCCCC
Confidence 9999999998653321100 0112346778999998544 678999999999999999998 899986532
Q ss_pred CCcccHHHHHHHHHhccC-CCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhh
Q 006522 571 NDGKGLESLVRKAFRERR-PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 639 (642)
Q Consensus 571 ~~~~~l~~~~~~~~~~~~-~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l 639 (642)
... ..........+ +.+..++ ..+.+++.+||+.+|++||+++|+++.|+++
T Consensus 347 ~~~----~~~~~~~~~~~~~~p~~~~-------------~~l~~li~~cl~~~P~~RPs~~ell~~L~~~ 399 (401)
T cd05107 347 MNE----QFYNAIKRGYRMAKPAHAS-------------DEIYEIMQKCWEEKFEIRPDFSQLVHLVGDL 399 (401)
T ss_pred chH----HHHHHHHcCCCCCCCCCCC-------------HHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 211 11111111111 1111111 2456688889999999999999999999986
No 68
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=1.5e-38 Score=333.56 Aligned_cols=244 Identities=22% Similarity=0.331 Sum_probs=189.0
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
.+.||+|+||.||++.....+ +.||||.+.........+.+.+|++++++++|+||+++++++...+..++||||
T Consensus 79 ~~~lg~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 153 (353)
T PLN00034 79 VNRIGSGAGGTVYKVIHRPTG-----RLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEF 153 (353)
T ss_pred hhhccCCCCeEEEEEEECCCC-----CEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEec
Confidence 467999999999999987654 799999997654433447789999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCC
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 506 (642)
+++|+|.+.. ..++..+..++.||+.||+|||+ .+|+||||||+|||+++++.+||+|||+++.....
T Consensus 154 ~~~~~L~~~~---------~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~ 221 (353)
T PLN00034 154 MDGGSLEGTH---------IADEQFLADVARQILSGIAYLHR---RHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQT 221 (353)
T ss_pred CCCCcccccc---------cCCHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCEEEcccccceecccc
Confidence 9999986432 25667888999999999999999 89999999999999999999999999999865432
Q ss_pred CcccccceeeecCCCcccccCCCcccCcccccc----CCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHH
Q 006522 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIY----GSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRK 582 (642)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~ 582 (642)
.. ......||..|+|||++.. +...+.++|||||||++|||++|+.||..... .........
T Consensus 222 ~~------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~--~~~~~~~~~ 287 (353)
T PLN00034 222 MD------------PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQ--GDWASLMCA 287 (353)
T ss_pred cc------------cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCC--ccHHHHHHH
Confidence 11 0113468889999998532 23345689999999999999999999973222 122222222
Q ss_pred HHhc-cCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 583 AFRE-RRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 583 ~~~~-~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
.... .......++ .++.+++.+||+.||++||++.|+++
T Consensus 288 ~~~~~~~~~~~~~~-------------~~l~~li~~~l~~~P~~Rpt~~ell~ 327 (353)
T PLN00034 288 ICMSQPPEAPATAS-------------REFRHFISCCLQREPAKRWSAMQLLQ 327 (353)
T ss_pred HhccCCCCCCCccC-------------HHHHHHHHHHccCChhhCcCHHHHhc
Confidence 2111 111111222 23556888899999999999999986
No 69
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=1.1e-38 Score=329.75 Aligned_cols=237 Identities=18% Similarity=0.264 Sum_probs=189.9
Q ss_pred ccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC--ccccHHHHHHHHHHHhcc-cCCCeeeEEEEEEeCCceEEEEe
Q 006522 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 349 ~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
.||+|+||.||+++...++ +.||||.+.+.. .....+.+..|..++..+ +||||+++++++...+..++|||
T Consensus 2 ~lg~G~~g~V~~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~E 76 (320)
T cd05590 2 VLGKGSFGKVMLARLKESG-----RLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVME 76 (320)
T ss_pred eeeeCCCeEEEEEEEcCCC-----CEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEc
Confidence 6899999999999987765 799999987531 223346778899999877 79999999999999999999999
Q ss_pred eccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCC
Q 006522 426 FIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPG 505 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 505 (642)
|+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 77 y~~~g~L~~~i~~~~-----~l~~~~~~~~~~ql~~~L~~lH~---~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~ 148 (320)
T cd05590 77 FVNGGDLMFHIQKSR-----RFDEARARFYAAEITSALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIF 148 (320)
T ss_pred CCCCchHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCc
Confidence 999999999987653 38999999999999999999999 8999999999999999999999999999875321
Q ss_pred CCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHh
Q 006522 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR 585 (642)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~ 585 (642)
.. .......||+.|+|||++. +..++.++|||||||++|||+||+.||.... ..........
T Consensus 149 ~~------------~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~el~~g~~Pf~~~~-----~~~~~~~i~~ 210 (320)
T cd05590 149 NG------------KTTSTFCGTPDYIAPEILQ-EMLYGPSVDWWAMGVLLYEMLCGHAPFEAEN-----EDDLFEAILN 210 (320)
T ss_pred CC------------CcccccccCccccCHHHHc-CCCCCCccchhhhHHHHHHHhhCCCCCCCCC-----HHHHHHHHhc
Confidence 11 0111346889999999854 4678999999999999999999999997532 2333344433
Q ss_pred ccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCH
Q 006522 586 ERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRM 629 (642)
Q Consensus 586 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~ 629 (642)
.....+..+++ .+.+++.+|++.||++||++
T Consensus 211 ~~~~~~~~~~~-------------~~~~li~~~L~~dP~~R~~~ 241 (320)
T cd05590 211 DEVVYPTWLSQ-------------DAVDILKAFMTKNPTMRLGS 241 (320)
T ss_pred CCCCCCCCCCH-------------HHHHHHHHHcccCHHHCCCC
Confidence 33333333333 34557888999999999998
No 70
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=4.7e-38 Score=316.03 Aligned_cols=251 Identities=23% Similarity=0.392 Sum_probs=198.4
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEe
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
..+.||+|++|.||++...+.+ +.|++|.+..... ..+++.+|++++++++||||+++++++...+..++|||
T Consensus 10 ~~~~ig~g~~~~v~~~~~~~~~-----~~~~~K~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (263)
T cd05052 10 MKHKLGGGQYGEVYEGVWKKYS-----LTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 82 (263)
T ss_pred EeeecCCcccceEEEEEEecCC-----ceEEEEEecCCch--HHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEE
Confidence 3467999999999999987654 7899999875432 24779999999999999999999999999999999999
Q ss_pred eccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCC
Q 006522 426 FIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPG 505 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 505 (642)
|+++|+|.+++..... ..+++..+..++.|++.||+|||+ .+++||||||+||++++++.+||+|||+++....
T Consensus 83 ~~~~~~L~~~~~~~~~---~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~ 156 (263)
T cd05052 83 FMTYGNLLDYLRECNR---QEVNAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG 156 (263)
T ss_pred eCCCCcHHHHHHhCCC---CCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccCcceEEEcCCCcEEeCCCcccccccc
Confidence 9999999999976433 248999999999999999999999 8999999999999999999999999999876543
Q ss_pred CCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHHH
Q 006522 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAF 584 (642)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~~l~~~~~~~~ 584 (642)
.... ......++..|+|||+.. +..++.++|||||||++|||+| |..||.... .........
T Consensus 157 ~~~~-----------~~~~~~~~~~y~aPE~~~-~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~-----~~~~~~~~~ 219 (263)
T cd05052 157 DTYT-----------AHAGAKFPIKWTAPESLA-YNKFSIKSDVWAFGVLLWEIATYGMSPYPGID-----LSQVYELLE 219 (263)
T ss_pred ceee-----------ccCCCCCccccCCHHHhc-cCCCCchhHHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHHHH
Confidence 2110 000123356799999854 4778999999999999999998 999986432 222222222
Q ss_pred hc-cCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhh
Q 006522 585 RE-RRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 639 (642)
Q Consensus 585 ~~-~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l 639 (642)
.. .....+.++ ..+.+++.+||+.+|++||++.|++++|+.+
T Consensus 220 ~~~~~~~~~~~~-------------~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 220 KGYRMERPEGCP-------------PKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred CCCCCCCCCCCC-------------HHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 11 111111111 2456688899999999999999999999875
No 71
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=5.2e-38 Score=318.27 Aligned_cols=261 Identities=21% Similarity=0.353 Sum_probs=198.3
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEe
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
....||+|+||.||++.............||+|.+..........+|.+|+.++++++||||+++++++......++|||
T Consensus 10 ~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~e 89 (277)
T cd05062 10 MSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME 89 (277)
T ss_pred eeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCeEEEEe
Confidence 34679999999999998754322223378999998754433334678999999999999999999999999899999999
Q ss_pred eccCCcHHHHHhcCCCC-----CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEeccccc
Q 006522 426 FIRNGSLYAALHAGPSD-----SLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLN 500 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~-----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla 500 (642)
|+++|+|.++++..... ....+++..+..++.|++.||+|||+ .+++||||||+||++++++.+||+|||++
T Consensus 90 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~~vH~dlkp~Nil~~~~~~~~l~dfg~~ 166 (277)
T cd05062 90 LMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMT 166 (277)
T ss_pred cCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCcchheEEEcCCCCEEECCCCCc
Confidence 99999999999754321 11347889999999999999999999 89999999999999999999999999998
Q ss_pred ccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHH
Q 006522 501 RLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESL 579 (642)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~~l~~~ 579 (642)
+......... . .....++..|+|||++. +..++.++|||||||++|||+| |..||..... ...
T Consensus 167 ~~~~~~~~~~-------~---~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~-----~~~ 230 (277)
T cd05062 167 RDIYETDYYR-------K---GGKGLLPVRWMSPESLK-DGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSN-----EQV 230 (277)
T ss_pred cccCCcceee-------c---CCCCccCHhhcChhHhh-cCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH-----HHH
Confidence 7654321110 0 01224567799999854 4678999999999999999999 7888864321 222
Q ss_pred HHHHHhccC-CCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHh
Q 006522 580 VRKAFRERR-PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 638 (642)
Q Consensus 580 ~~~~~~~~~-~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 638 (642)
.+....... ...... ...+.+++.+||+.||++|||+.|+++.|++
T Consensus 231 ~~~~~~~~~~~~~~~~-------------~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 231 LRFVMEGGLLDKPDNC-------------PDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred HHHHHcCCcCCCCCCC-------------CHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 222222111 111111 1245678999999999999999999998864
No 72
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=5.8e-39 Score=332.84 Aligned_cols=243 Identities=20% Similarity=0.282 Sum_probs=193.3
Q ss_pred ccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC--ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 349 ~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
.||+|+||.||++.....+ +.||+|.+.... .......+.+|++++.+++||||+++++++...+..++||||
T Consensus 2 ~lG~G~~g~V~~~~~~~~~-----~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~ 76 (325)
T cd05594 2 LLGKGTFGKVILVKEKATG-----RYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEY 76 (325)
T ss_pred eeeeCCCEEEEEEEECCCC-----CEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeC
Confidence 6899999999999987654 899999997542 222346778899999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCC
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 506 (642)
+++|+|.+++.... .+++..+..++.||+.||+|||+. .+|+||||||+|||++.++.+||+|||+++.....
T Consensus 77 ~~~~~L~~~l~~~~-----~l~~~~~~~~~~qi~~aL~~lH~~--~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~ 149 (325)
T cd05594 77 ANGGELFFHLSRER-----VFSEDRARFYGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD 149 (325)
T ss_pred CCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhc--CCEEecCCCCCeEEECCCCCEEEecCCCCeecCCC
Confidence 99999999887543 489999999999999999999962 58999999999999999999999999998753221
Q ss_pred CcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHhc
Q 006522 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE 586 (642)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~~ 586 (642)
.. ......||+.|+|||++. +..++.++|||||||++|||+||+.||.... ...........
T Consensus 150 ~~------------~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~el~tG~~Pf~~~~-----~~~~~~~i~~~ 211 (325)
T cd05594 150 GA------------TMKTFCGTPEYLAPEVLE-DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD-----HEKLFELILME 211 (325)
T ss_pred Cc------------ccccccCCcccCCHHHHc-cCCCCCccccccccceeeeeccCCCCCCCCC-----HHHHHHHHhcC
Confidence 10 011346889999999854 4678999999999999999999999997432 22333333333
Q ss_pred cCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCC-----CHHHHHH
Q 006522 587 RRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRP-----RMRTVSE 634 (642)
Q Consensus 587 ~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----s~~ev~~ 634 (642)
...++..+++. +.+++.+||+.||++|+ ++.++++
T Consensus 212 ~~~~p~~~~~~-------------~~~li~~~L~~dP~~R~~~~~~~~~~il~ 251 (325)
T cd05594 212 EIRFPRTLSPE-------------AKSLLSGLLKKDPKQRLGGGPDDAKEIMQ 251 (325)
T ss_pred CCCCCCCCCHH-------------HHHHHHHHhhcCHHHhCCCCCCCHHHHhc
Confidence 33333334433 34577889999999996 8888874
No 73
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=2.7e-38 Score=320.60 Aligned_cols=258 Identities=21% Similarity=0.368 Sum_probs=195.8
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
.+.||+|+||.||+|.....+. .....+++|.+.........+++..|+.++++++||||+++++++. ....++++||
T Consensus 12 ~~~lg~G~~~~vy~~~~~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~~i~e~ 89 (279)
T cd05111 12 LKLLGSGVFGTVHKGIWIPEGD-SIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQLVTQL 89 (279)
T ss_pred ccccCccCCcceEEEEEcCCCC-ceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccEEEEEe
Confidence 4689999999999998765421 1123588888865433333467888999999999999999999875 4567899999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCC
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 506 (642)
+++|+|.++++.... .++|..+..|+.||+.||+|||+ .+++||||||+||++++++.+||+|||+++.....
T Consensus 90 ~~~gsL~~~l~~~~~----~~~~~~~~~i~~qi~~~l~~lH~---~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~ 162 (279)
T cd05111 90 SPLGSLLDHVRQHRD----SLDPQRLLNWCVQIAKGMYYLEE---HRMVHRNLAARNILLKSDSIVQIADFGVADLLYPD 162 (279)
T ss_pred CCCCcHHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHH---CCEeccccCcceEEEcCCCcEEEcCCccceeccCC
Confidence 999999999976542 48999999999999999999999 89999999999999999999999999999865432
Q ss_pred CcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHHHh
Q 006522 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFR 585 (642)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~~l~~~~~~~~~ 585 (642)
.... ......++..|+|||.+.. ..++.++|||||||++||++| |+.||.+... ..+..++ .
T Consensus 163 ~~~~----------~~~~~~~~~~y~~pE~~~~-~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~--~~~~~~~----~ 225 (279)
T cd05111 163 DKKY----------FYSEHKTPIKWMALESILF-GRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRP--HEVPDLL----E 225 (279)
T ss_pred Cccc----------ccCCCCCcccccCHHHhcc-CCcCchhhHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHH----H
Confidence 1100 0112346678999998544 678999999999999999998 9999975321 1122222 2
Q ss_pred ccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhhhc
Q 006522 586 ERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 641 (642)
Q Consensus 586 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l~~ 641 (642)
...... .+.. ....+.+++.+||..||++|||+.|+++.|..+..
T Consensus 226 ~~~~~~---~~~~--------~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~ 270 (279)
T cd05111 226 KGERLA---QPQI--------CTIDVYMVMVKCWMIDENVRPTFKELANEFTRMAR 270 (279)
T ss_pred CCCcCC---CCCC--------CCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHh
Confidence 111111 1111 11234568889999999999999999999988753
No 74
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.4e-38 Score=331.17 Aligned_cols=253 Identities=21% Similarity=0.286 Sum_probs=194.5
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC---ccccHHHHHHHHHHHhcc-cCCCeeeEEEEEEeCCceEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD---ATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLL 422 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~l 422 (642)
...||+|+||.||+++...+. ...+.||+|.+.+.. .....+.+.+|+.++.++ +||||+++++++...+..++
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~l 82 (332)
T cd05614 5 LKVLGTGAYGKVFLVRKVTGH--DTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLHL 82 (332)
T ss_pred EEEEeecCCEEEEEEEEcccC--CCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEEE
Confidence 467999999999999875432 122789999987531 222336688999999999 59999999999999999999
Q ss_pred EEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEeccccccc
Q 006522 423 ISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRL 502 (642)
Q Consensus 423 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 502 (642)
||||+++|+|.+++.... .+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 83 v~e~~~~g~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~---~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~ 154 (332)
T cd05614 83 ILDYVSGGEMFTHLYQRD-----NFSEDEVRFYSGEIILALEHLHK---LGIVYRDIKLENILLDSEGHVVLTDFGLSKE 154 (332)
T ss_pred EEeCCCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCcEecCCCHHHeEECCCCCEEEeeCcCCcc
Confidence 999999999999997643 38999999999999999999999 8999999999999999999999999999876
Q ss_pred CCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHH
Q 006522 503 LPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRK 582 (642)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~ 582 (642)
...... .......||..|+|||++.....++.++|||||||++|||+||+.||...... .........
T Consensus 155 ~~~~~~-----------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~-~~~~~~~~~ 222 (332)
T cd05614 155 FLSEEK-----------ERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGER-NTQSEVSRR 222 (332)
T ss_pred ccccCC-----------CccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCC-CCHHHHHHH
Confidence 432211 01113468899999998654345789999999999999999999999753221 122233333
Q ss_pred HHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCC-----CHHHHHH
Q 006522 583 AFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRP-----RMRTVSE 634 (642)
Q Consensus 583 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----s~~ev~~ 634 (642)
......++...+++. +.+++.+||+.||++|| ++.++++
T Consensus 223 ~~~~~~~~~~~~~~~-------------~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 266 (332)
T cd05614 223 ILKCDPPFPSFIGPE-------------AQDLLHKLLRKDPKKRLGAGPQGASEIKE 266 (332)
T ss_pred HhcCCCCCCCCCCHH-------------HHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence 333333333333333 34577889999999999 6667654
No 75
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=2.6e-38 Score=320.94 Aligned_cols=249 Identities=18% Similarity=0.247 Sum_probs=191.2
Q ss_pred cCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCc--cccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEeec
Q 006522 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA--TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFI 427 (642)
Q Consensus 350 lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~ 427 (642)
||+|+||.||++.....+ +.||+|.+..... ....+.+..|++++++++||||+++.+++...+..++||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~-----~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 75 (280)
T cd05608 1 LGKGGFGEVSACQMRATG-----KLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIM 75 (280)
T ss_pred CCCCCceeEEEEEEccCC-----cEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCC
Confidence 699999999999987664 7999999875422 222366788999999999999999999999999999999999
Q ss_pred cCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCCC
Q 006522 428 RNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTS 507 (642)
Q Consensus 428 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 507 (642)
++|+|.+++...... ...+++..+..++.||+.||+|||+ .+|+||||||+||++++++.+||+|||+++......
T Consensus 76 ~~g~L~~~~~~~~~~-~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~ 151 (280)
T cd05608 76 NGGDLRYHIYNVDEE-NPGFPEPRACFYTAQIISGLEHLHQ---RRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQ 151 (280)
T ss_pred CCCCHHHHHHhcccc-CCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEeeCccceecCCCC
Confidence 999999888643221 2358999999999999999999999 899999999999999999999999999987654321
Q ss_pred cccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHhcc
Q 006522 508 KVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRER 587 (642)
Q Consensus 508 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~~~ 587 (642)
. ......||+.|+|||++. +..++.++|||||||++|||+||+.||....... .............
T Consensus 152 ~------------~~~~~~g~~~y~aPE~~~-~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~ 217 (280)
T cd05608 152 S------------KTKGYAGTPGFMAPELLQ-GEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV-ENKELKQRILNDS 217 (280)
T ss_pred c------------cccccCCCcCccCHHHhc-CCCCCccccHHHHHHHHHHHHhCCCCCCCCCcch-hHHHHHHhhcccC
Confidence 1 011346788999999855 4778999999999999999999999997532211 1112222222221
Q ss_pred CCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCC-----CHHHHHH
Q 006522 588 RPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRP-----RMRTVSE 634 (642)
Q Consensus 588 ~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----s~~ev~~ 634 (642)
....+.++ ..+.+++.+||+.||++|| ++.++++
T Consensus 218 ~~~~~~~~-------------~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~ 256 (280)
T cd05608 218 VTYPDKFS-------------PASKSFCEALLAKDPEKRLGFRDGNCDGLRT 256 (280)
T ss_pred CCCcccCC-------------HHHHHHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence 11111122 2345688889999999999 5666664
No 76
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=1.7e-38 Score=329.67 Aligned_cols=243 Identities=17% Similarity=0.283 Sum_probs=189.3
Q ss_pred cccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC--ccccHHHHHHHHHHHhcc-cCCCeeeEEEEEEeCCceEEEE
Q 006522 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLIS 424 (642)
Q Consensus 348 ~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~ 424 (642)
++||+|+||.||++....++ +.||+|.++... .....+.+.+|+.++.++ +||||+++++++...+..++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ 75 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTE-----RIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVI 75 (329)
T ss_pred CeeeeCCCeEEEEEEECCCC-----CEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEE
Confidence 36899999999999988765 789999997642 222335678899998877 8999999999999999999999
Q ss_pred eeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCC
Q 006522 425 DFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLP 504 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 504 (642)
||+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++...
T Consensus 76 E~~~~~~L~~~~~~~~-----~l~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~ 147 (329)
T cd05618 76 EYVNGGDLMFHMQRQR-----KLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 147 (329)
T ss_pred eCCCCCCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEECCCCCEEEeeCCcccccc
Confidence 9999999999887543 38999999999999999999999 899999999999999999999999999987532
Q ss_pred CCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCC---cccHHHHHH
Q 006522 505 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEND---GKGLESLVR 581 (642)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~---~~~l~~~~~ 581 (642)
... .......||..|+|||++. +..++.++|||||||++|||+||+.||...... ......++.
T Consensus 148 ~~~------------~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~ 214 (329)
T cd05618 148 RPG------------DTTSTFCGTPNYIAPEILR-GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLF 214 (329)
T ss_pred CCC------------CccccccCCccccCHHHHc-CCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHH
Confidence 211 0112346889999999854 477899999999999999999999999632211 111222222
Q ss_pred H-HHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCH
Q 006522 582 K-AFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRM 629 (642)
Q Consensus 582 ~-~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~ 629 (642)
. .......++..+++ .+.+++.+||+.||++||+.
T Consensus 215 ~~i~~~~~~~p~~~~~-------------~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 215 QVILEKQIRIPRSLSV-------------KAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred HHHhcCCCCCCCCCCH-------------HHHHHHHHHhcCCHHHcCCC
Confidence 2 22222222322222 34568888999999999984
No 77
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=2.9e-38 Score=318.67 Aligned_cols=260 Identities=20% Similarity=0.257 Sum_probs=191.2
Q ss_pred ccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEeecc
Q 006522 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIR 428 (642)
Q Consensus 349 ~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~ 428 (642)
.||+|+||.||+|....+. ....+++|.++..........|.+|+.++++++||||+++++++.+....++||||++
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~---~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 78 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGY---TPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCP 78 (269)
T ss_pred cccccCCceEEEEEEcCCC---CceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCC
Confidence 5899999999999875432 1267999998765433333578999999999999999999999999999999999999
Q ss_pred CCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCCCc
Q 006522 429 NGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSK 508 (642)
Q Consensus 429 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 508 (642)
+|+|.++++..........++..+..++.|++.||+|||+ .+++||||||+||+++.++.+|++|||+++.......
T Consensus 79 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~ 155 (269)
T cd05087 79 LGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHK---NNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDY 155 (269)
T ss_pred CCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHH---CCEeccccCcceEEEcCCCcEEECCccccccccCcce
Confidence 9999999976543222346788888999999999999999 8999999999999999999999999999875432211
Q ss_pred ccccceeeecCCCcccccCCCcccCccccccC------CCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHH
Q 006522 509 VTKNETIVTSGTGSRISAISNVYLAPEARIYG------SKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVR 581 (642)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~~l~~~~~ 581 (642)
. .......++..|+|||++... ..++.++|||||||++|||++ |+.||....... ....
T Consensus 156 ~----------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~--~~~~-- 221 (269)
T cd05087 156 Y----------VTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQ--VLTY-- 221 (269)
T ss_pred e----------ecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHH--HHHH--
Confidence 0 001133567789999985421 135789999999999999996 999997532211 1111
Q ss_pred HHHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHH
Q 006522 582 KAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 637 (642)
Q Consensus 582 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~ 637 (642)
...... ....++.+.... ...+.+++..|| .+|++|||++||+..|+
T Consensus 222 ~~~~~~---~~~~~~~~~~~~-----~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 222 TVREQQ---LKLPKPRLKLPL-----SDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred Hhhccc---CCCCCCccCCCC-----ChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 111111 111122211111 113445777898 58999999999998875
No 78
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=1.9e-38 Score=327.37 Aligned_cols=241 Identities=20% Similarity=0.308 Sum_probs=188.9
Q ss_pred ccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC--ccccHHHHHHHHHHHhcc-cCCCeeeEEEEEEeCCceEEEEe
Q 006522 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 349 ~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
.||+|+||.||+|.....+ +.||+|.++... .....+.+..|..++... +||||+++++++...+..++|||
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e 76 (316)
T cd05592 2 VLGKGSFGKVMLAELKGTN-----EFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVME 76 (316)
T ss_pred eeeeCCCeEEEEEEECCCC-----CEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEc
Confidence 6899999999999987664 789999987531 122235566777777654 89999999999999999999999
Q ss_pred eccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCC
Q 006522 426 FIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPG 505 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 505 (642)
|+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 77 ~~~gg~L~~~~~~~~-----~~~~~~~~~~~~qi~~al~~LH~---~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~ 148 (316)
T cd05592 77 YLNGGDLMFHIQSSG-----RFDEARARFYAAEIICGLQFLHK---KGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMN 148 (316)
T ss_pred CCCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCEEeCCCCHHHeEECCCCCEEEccCcCCeECCC
Confidence 999999999997643 38899999999999999999999 8999999999999999999999999999875432
Q ss_pred CCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHh
Q 006522 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR 585 (642)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~ 585 (642)
.. .......||+.|+|||++. +..++.++|||||||++|||++|+.||.+... .........
T Consensus 149 ~~------------~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~-----~~~~~~i~~ 210 (316)
T cd05592 149 GE------------GKASTFCGTPDYIAPEILK-GQKYNESVDWWSFGVLLYEMLIGQSPFHGEDE-----DELFDSILN 210 (316)
T ss_pred CC------------CccccccCCccccCHHHHc-CCCCCCcccchhHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHc
Confidence 21 0111346889999999854 46789999999999999999999999975321 233333333
Q ss_pred ccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHH-HHH
Q 006522 586 ERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMR-TVS 633 (642)
Q Consensus 586 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~-ev~ 633 (642)
....++..+++. +.+++.+||+.||++||++. ++.
T Consensus 211 ~~~~~~~~~~~~-------------~~~ll~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05592 211 DRPHFPRWISKE-------------AKDCLSKLFERDPTKRLGVDGDIR 246 (316)
T ss_pred CCCCCCCCCCHH-------------HHHHHHHHccCCHHHcCCChHHHH
Confidence 333333333322 34577889999999999875 443
No 79
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=5.6e-38 Score=318.45 Aligned_cols=260 Identities=26% Similarity=0.397 Sum_probs=201.9
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
.+.||+|+||.||+|.............||||.++........+.|.+|++++++++||||+++++++...+..++||||
T Consensus 10 ~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 89 (280)
T cd05049 10 KRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPIMVFEY 89 (280)
T ss_pred HhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeEEEEec
Confidence 46799999999999987654323334789999997654443447899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcCCC---------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecc
Q 006522 427 IRNGSLYAALHAGPS---------DSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGF 497 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~---------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~Df 497 (642)
+++|+|.++++..+. .....+++..+..++.|++.|++|||+ .+++||||||+||+++.++.+||+||
T Consensus 90 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~---~~i~h~dlkp~nili~~~~~~kl~d~ 166 (280)
T cd05049 90 MEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLAS---QHFVHRDLATRNCLVGYDLVVKIGDF 166 (280)
T ss_pred CCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhh---CCeeccccccceEEEcCCCeEEECCc
Confidence 999999999976532 112358999999999999999999999 89999999999999999999999999
Q ss_pred cccccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcccH
Q 006522 498 GLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGL 576 (642)
Q Consensus 498 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~~l 576 (642)
|+++......... . .....++..|+|||++. +..++.++|||||||++|||++ |+.||.....
T Consensus 167 g~~~~~~~~~~~~-------~---~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~----- 230 (280)
T cd05049 167 GMSRDVYTTDYYR-------V---GGHTMLPIRWMPPESIM-YRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSN----- 230 (280)
T ss_pred ccceecccCccee-------c---CCCCcccceecChhhhc-cCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCH-----
Confidence 9987653321100 0 01223467799999854 4778999999999999999999 9999865322
Q ss_pred HHHHHHHHhccCC-CccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHh
Q 006522 577 ESLVRKAFRERRP-LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 638 (642)
Q Consensus 577 ~~~~~~~~~~~~~-~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 638 (642)
...+......... ....++ ..+.+++.+||+.||++||++.|+++.|++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~-------------~~~~~li~~~l~~~p~~Rp~~~eil~~l~~ 280 (280)
T cd05049 231 EEVIECITQGRLLQRPRTCP-------------SEVYDIMLGCWKRDPQQRINIKDIHERLQK 280 (280)
T ss_pred HHHHHHHHcCCcCCCCCCCC-------------HHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence 2222222222111 111111 245678999999999999999999999863
No 80
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=2.7e-38 Score=343.73 Aligned_cols=251 Identities=20% Similarity=0.280 Sum_probs=196.2
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEe
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
....||+|++|.||++....+.+ ..||+|.+.... ......+.+|+.++++++|||||++++++...+..++|||
T Consensus 71 ~~~~lg~G~~g~vy~a~~~~~~~----~~vv~K~~~~~~-~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E 145 (478)
T PTZ00267 71 LTTLVGRNPTTAAFVATRGSDPK----EKVVAKFVMLND-ERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIME 145 (478)
T ss_pred EEEEEEeCCCcEEEEEEEcCCCC----eEEEEEEcccCC-HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEE
Confidence 45789999999999998766521 678888765433 2233567889999999999999999999999999999999
Q ss_pred eccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCC
Q 006522 426 FIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPG 505 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 505 (642)
|+++|+|.++++..... ..++++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 146 ~~~gg~L~~~l~~~~~~-~~~l~~~~~~~i~~qi~~aL~~lH~---~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~ 221 (478)
T PTZ00267 146 YGSGGDLNKQIKQRLKE-HLPFQEYEVGLLFYQIVLALDEVHS---RKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSD 221 (478)
T ss_pred CCCCCCHHHHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHh---CCEEECCcCHHhEEECCCCcEEEEeCcCceecCC
Confidence 99999999988653221 2358999999999999999999999 8999999999999999999999999999987543
Q ss_pred CCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHh
Q 006522 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR 585 (642)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~ 585 (642)
.... ......+||+.|+|||++. +..++.++|||||||++|||+||+.||.... ..........
T Consensus 222 ~~~~----------~~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~-----~~~~~~~~~~ 285 (478)
T PTZ00267 222 SVSL----------DVASSFCGTPYYLAPELWE-RKRYSKKADMWSLGVILYELLTLHRPFKGPS-----QREIMQQVLY 285 (478)
T ss_pred cccc----------ccccccCCCccccCHhHhC-CCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHh
Confidence 2110 0112456899999999854 4778999999999999999999999997422 2233333332
Q ss_pred ccC-CCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 586 ERR-PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 586 ~~~-~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
... +.+..+++ .+.+++.+||+.||++||++.+++.
T Consensus 286 ~~~~~~~~~~s~-------------~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 286 GKYDPFPCPVSS-------------GMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred CCCCCCCccCCH-------------HHHHHHHHHhccChhhCcCHHHHHh
Confidence 221 12222222 3456888899999999999999864
No 81
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=1.7e-38 Score=329.65 Aligned_cols=246 Identities=17% Similarity=0.286 Sum_probs=191.9
Q ss_pred ccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC--ccccHHHHHHHHHHHhcc-cCCCeeeEEEEEEeCCceEEEEe
Q 006522 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 349 ~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
+||+|+||.||++.....+ +.||||.++... .....+.+.+|..++.++ +||||+++++++...+..++|||
T Consensus 2 ~lG~G~~g~V~~~~~~~~~-----~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e 76 (329)
T cd05588 2 VIGRGSYAKVLLVELKKTR-----RIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIE 76 (329)
T ss_pred eEeeCCCeEEEEEEECCCC-----CEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEe
Confidence 6899999999999987765 899999997642 222335688999999998 79999999999999999999999
Q ss_pred eccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCC
Q 006522 426 FIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPG 505 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 505 (642)
|+++|+|.+++...+ .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 77 ~~~~g~L~~~~~~~~-----~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~ 148 (329)
T cd05588 77 FVSGGDLMFHMQRQR-----KLPEEHARFYSAEISLALNFLHE---RGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIR 148 (329)
T ss_pred CCCCCCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEECcCcccccccc
Confidence 999999999887543 38999999999999999999999 8999999999999999999999999999874321
Q ss_pred CCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCC---cccHHHHHHH
Q 006522 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEND---GKGLESLVRK 582 (642)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~---~~~l~~~~~~ 582 (642)
.. .......||+.|+|||++. +..++.++|||||||++|||+||+.||+..... ......+...
T Consensus 149 ~~------------~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~ 215 (329)
T cd05588 149 PG------------DTTSTFCGTPNYIAPEILR-GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQ 215 (329)
T ss_pred CC------------CccccccCCccccCHHHHc-CCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHH
Confidence 11 0111346889999999854 477899999999999999999999999642211 1112222222
Q ss_pred -HHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCC------HHHHH
Q 006522 583 -AFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPR------MRTVS 633 (642)
Q Consensus 583 -~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs------~~ev~ 633 (642)
.......++..+++ ++.+++.+|++.||++||+ +.|++
T Consensus 216 ~~~~~~~~~p~~~~~-------------~~~~li~~~L~~dP~~R~~~~~~~~~~~i~ 260 (329)
T cd05588 216 VILEKQIRIPRSLSV-------------KASSVLKGFLNKDPKERLGCHPQTGFRDIK 260 (329)
T ss_pred HHHcCCCCCCCCCCH-------------HHHHHHHHHhccCHHHcCCCCCCCCHHHHh
Confidence 22222222333332 3456888899999999997 56665
No 82
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=9.4e-38 Score=314.38 Aligned_cols=256 Identities=26% Similarity=0.423 Sum_probs=200.2
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEe
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
..+.||+|+||.||+|.....++ ....||||.++.........+|.+|+.++++++||||+++++++...+..++|||
T Consensus 8 ~~~~lg~g~~g~vy~~~~~~~~~--~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e 85 (266)
T cd05033 8 IEKVIGGGEFGEVCRGRLKLPGK--KEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMIITE 85 (266)
T ss_pred eeeEecCCccceEEEEEEccCCC--CcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEEEE
Confidence 35789999999999999865421 1268999998765444444789999999999999999999999999999999999
Q ss_pred eccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCC
Q 006522 426 FIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPG 505 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 505 (642)
|+++|+|.+++..... .+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++....
T Consensus 86 ~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~l~~~l~~Lh~---~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 158 (266)
T cd05033 86 YMENGSLDKFLRENDG----KFTVGQLVGMLRGIASGMKYLSE---MNYVHRDLAARNILVNSNLVCKVSDFGLSRRLED 158 (266)
T ss_pred cCCCCCHHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCCEEECccchhhcccc
Confidence 9999999999976442 48999999999999999999999 8999999999999999999999999999987642
Q ss_pred CCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHHH
Q 006522 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAF 584 (642)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~~l~~~~~~~~ 584 (642)
..... . .....++..|+|||.+. +..++.++||||||+++|||++ |..||..... ........
T Consensus 159 ~~~~~-----~-----~~~~~~~~~y~~Pe~~~-~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~-----~~~~~~~~ 222 (266)
T cd05033 159 SEATY-----T-----TKGGKIPIRWTAPEAIA-YRKFTSASDVWSFGIVMWEVMSYGERPYWDMSN-----QDVIKAVE 222 (266)
T ss_pred cccce-----e-----ccCCCCCccccChhhhc-cCCCccccchHHHHHHHHHHHccCCCCCCCCCH-----HHHHHHHH
Confidence 21100 0 01223456799999854 4678999999999999999998 9999864221 12222221
Q ss_pred hcc-CCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhh
Q 006522 585 RER-RPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 639 (642)
Q Consensus 585 ~~~-~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l 639 (642)
... .+..... ...+.+++.+||+.+|++||++.|+++.|+++
T Consensus 223 ~~~~~~~~~~~-------------~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 223 DGYRLPPPMDC-------------PSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred cCCCCCCCCCC-------------CHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 111 1111111 12456789999999999999999999999875
No 83
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=1.7e-38 Score=323.63 Aligned_cols=261 Identities=18% Similarity=0.235 Sum_probs=192.8
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCc-cccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEe
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA-TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
...||+|+||.||+++...++ +.||||++..... ....+.+.+|++++++++||||+++++++...+..++|||
T Consensus 6 ~~~lg~g~~~~v~~~~~~~~~-----~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 6 LGVVGEGAYGVVLKCRHKETK-----EIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred EEEecccCCEEEEEEEECCCC-----cEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 467899999999999987765 7899999876432 2234678899999999999999999999999999999999
Q ss_pred eccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCC
Q 006522 426 FIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPG 505 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 505 (642)
|++++.+..+.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 81 ~~~~~~l~~~~~~~-----~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 152 (287)
T cd07848 81 YVEKNMLELLEEMP-----NGVPPEKVRSYIYQLIKAIHWCHK---NDIVHRDIKPENLLISHNDVLKLCDFGFARNLSE 152 (287)
T ss_pred cCCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEEeeccCcccccc
Confidence 99987776554322 248999999999999999999999 8999999999999999999999999999987543
Q ss_pred CCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHH-
Q 006522 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAF- 584 (642)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~- 584 (642)
.... ......||+.|+|||++. +..++.++||||+||++|||++|+.||....... .+.. +....
T Consensus 153 ~~~~-----------~~~~~~~~~~y~aPE~~~-~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~-~~~~-~~~~~~ 218 (287)
T cd07848 153 GSNA-----------NYTEYVATRWYRSPELLL-GAPYGKAVDMWSVGCILGELSDGQPLFPGESEID-QLFT-IQKVLG 218 (287)
T ss_pred cccc-----------cccccccccccCCcHHHc-CCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHH-HHHH-HHHhhC
Confidence 2110 111346788899999854 4678999999999999999999999997533211 1111 11100
Q ss_pred ----------hccCCCccccChhhhhchh-----HHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 585 ----------RERRPLSEVIDPALVKEIH-----AKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 585 ----------~~~~~~~~~~d~~l~~~~~-----~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
...........+....... .......+.+++.+||+.||++|||++|+++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 219 PLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred CCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0000000000000000000 0011235788999999999999999999875
No 84
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=1.7e-38 Score=328.81 Aligned_cols=242 Identities=17% Similarity=0.249 Sum_probs=191.8
Q ss_pred ccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC--ccccHHHHHHHHHHHhcc-cCCCeeeEEEEEEeCCceEEEEe
Q 006522 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 349 ~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
+||+|+||.||+|+...++ +.||+|.++... .....+.+..|.+++..+ +||||+++++++...+..++|||
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E 76 (321)
T cd05591 2 VLGKGSFGKVMLAELKGTD-----EVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVME 76 (321)
T ss_pred ccccCCCeEEEEEEECCCC-----CEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEe
Confidence 6899999999999987654 799999987531 222336678899999876 89999999999999999999999
Q ss_pred eccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCC
Q 006522 426 FIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPG 505 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 505 (642)
|+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 77 ~~~~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~ 148 (321)
T cd05591 77 YVNGGDLMFQIQRSR-----KFDEPRSRFYAAEVTLALMFLHR---HGVIYRDLKLDNILLDAEGHCKLADFGMCKEGIL 148 (321)
T ss_pred CCCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEeecccceeccc
Confidence 999999999987643 38899999999999999999999 8999999999999999999999999999875322
Q ss_pred CCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHh
Q 006522 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR 585 (642)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~ 585 (642)
... ......||+.|+|||++. +..++.++|||||||++|||+||+.||.... ..........
T Consensus 149 ~~~------------~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwslG~il~el~tg~~Pf~~~~-----~~~~~~~i~~ 210 (321)
T cd05591 149 NGV------------TTTTFCGTPDYIAPEILQ-ELEYGPSVDWWALGVLMYEMMAGQPPFEADN-----EDDLFESILH 210 (321)
T ss_pred CCc------------cccccccCccccCHHHHc-CCCCCCccceechhHHHHHHhcCCCCCCCCC-----HHHHHHHHHc
Confidence 110 111346888999999854 4678999999999999999999999997532 2233333333
Q ss_pred ccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCC-------CHHHHHH
Q 006522 586 ERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRP-------RMRTVSE 634 (642)
Q Consensus 586 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-------s~~ev~~ 634 (642)
.....+..+++ ++.+++.+||+.||++|| ++.++++
T Consensus 211 ~~~~~p~~~~~-------------~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~ 253 (321)
T cd05591 211 DDVLYPVWLSK-------------EAVSILKAFMTKNPNKRLGCVASQGGEDAIKQ 253 (321)
T ss_pred CCCCCCCCCCH-------------HHHHHHHHHhccCHHHcCCCCCCCCCHHHHhc
Confidence 33222222332 345678889999999999 6666653
No 85
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=5.4e-38 Score=315.17 Aligned_cols=249 Identities=26% Similarity=0.415 Sum_probs=196.1
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
.+.||+|++|.||+|....+ ..||+|.+..... ..+.+.+|+.++++++|+||+++++++...+..++||||
T Consensus 11 ~~~lg~g~~g~v~~~~~~~~------~~v~iK~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 82 (261)
T cd05072 11 VKKLGAGQFGEVWMGYYNNS------TKVAVKTLKPGTM--SVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEY 82 (261)
T ss_pred eeecCCcCCceEEEEEecCC------ceEEEEEccCCch--hHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEec
Confidence 46799999999999997665 6799999865332 237899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCC
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 506 (642)
+++|+|.++++.... ..+++..+..++.|++.||+|||+ .+++||||||+||++++++.+||+|||+++.....
T Consensus 83 ~~~~~L~~~l~~~~~---~~~~~~~~~~~~~~l~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~ 156 (261)
T cd05072 83 MAKGSLLDFLKSDEG---GKVLLPKLIDFSAQIAEGMAYIER---KNYIHRDLRAANVLVSESLMCKIADFGLARVIEDN 156 (261)
T ss_pred CCCCcHHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchhhEEecCCCcEEECCCccceecCCC
Confidence 999999999976432 248899999999999999999999 89999999999999999999999999999865432
Q ss_pred CcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHHHh
Q 006522 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFR 585 (642)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~~l~~~~~~~~~ 585 (642)
... ......++..|+|||+.. +..++.++|||||||++|||+| |+.||..... .........
T Consensus 157 ~~~-----------~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~-----~~~~~~~~~ 219 (261)
T cd05072 157 EYT-----------AREGAKFPIKWTAPEAIN-FGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSN-----SDVMSALQR 219 (261)
T ss_pred cee-----------ccCCCccceecCCHHHhc-cCCCChhhhhhhhHHHHHHHHccCCCCCCCCCH-----HHHHHHHHc
Confidence 110 011223556799999854 4678899999999999999999 9999964321 111222111
Q ss_pred cc-CCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhh
Q 006522 586 ER-RPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 639 (642)
Q Consensus 586 ~~-~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l 639 (642)
.. .+....+ ..++.+++.+||+.+|++||+++++.+.|+.+
T Consensus 220 ~~~~~~~~~~-------------~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 220 GYRMPRMENC-------------PDELYDIMKTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred CCCCCCCCCC-------------CHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 11 1111111 12456789999999999999999999999864
No 86
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=3.5e-38 Score=318.87 Aligned_cols=246 Identities=21% Similarity=0.314 Sum_probs=188.0
Q ss_pred ccCccCCceeEEEEecCCC-------------------CCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeee
Q 006522 349 VVGKSKNGIMYKVVVGRGS-------------------GMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVR 409 (642)
Q Consensus 349 ~lg~g~~g~vy~~~~~~~~-------------------~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~ 409 (642)
.||+|+||.||+|.....+ ..+....|++|.+..... ...++|.+|+.++++++||||++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~-~~~~~~~~~~~~~~~l~h~niv~ 80 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHR-DIALAFFETASLMSQVSHIHLAF 80 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHH-HHHHHHHHHHHHHhcCCCCCeee
Confidence 5899999999999864321 122335689999865422 22367889999999999999999
Q ss_pred EEEEEEeCCceEEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCC
Q 006522 410 LKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDE 489 (642)
Q Consensus 410 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~ 489 (642)
++++|......++||||+++|+|.+++..... .+++..+..++.||++||+|||+ .+|+||||||+||+++..
T Consensus 81 ~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~----~~~~~~~~~i~~qi~~~l~~lH~---~~iiH~dlkp~Nill~~~ 153 (274)
T cd05076 81 VHGVCVRGSENIMVEEFVEHGPLDVCLRKEKG----RVPVAWKITVAQQLASALSYLED---KNLVHGNVCAKNILLARL 153 (274)
T ss_pred EEEEEEeCCceEEEEecCCCCcHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHc---CCccCCCCCcccEEEecc
Confidence 99999999999999999999999999875432 48899999999999999999999 899999999999999754
Q ss_pred C-------CeEEecccccccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHH-h
Q 006522 490 L-------HPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEIL-T 561 (642)
Q Consensus 490 ~-------~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~-t 561 (642)
+ .+|++|||++....... ...++..|+|||.+.....++.++|||||||++|||+ +
T Consensus 154 ~~~~~~~~~~kl~d~g~~~~~~~~~----------------~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~ 217 (274)
T cd05076 154 GLAEGTSPFIKLSDPGVSFTALSRE----------------ERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFD 217 (274)
T ss_pred CcccCccceeeecCCcccccccccc----------------ccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhC
Confidence 3 37999999876432110 1245667999998655466899999999999999995 6
Q ss_pred CCCCCCCCCCCcccHHHHHHHHHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHH
Q 006522 562 GRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 637 (642)
Q Consensus 562 G~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~ 637 (642)
|+.||...... .... ........++... ..+.+++.+||+.+|++|||+.++++.|.
T Consensus 218 g~~p~~~~~~~--~~~~----~~~~~~~~~~~~~-------------~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 218 GEVPLKERTPS--EKER----FYEKKHRLPEPSC-------------KELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred CCCCccccChH--HHHH----HHHhccCCCCCCC-------------hHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 99998753221 1111 1122222222111 13566888999999999999999998873
No 87
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=6.6e-38 Score=312.81 Aligned_cols=249 Identities=25% Similarity=0.415 Sum_probs=193.4
Q ss_pred ccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEeecc
Q 006522 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIR 428 (642)
Q Consensus 349 ~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~ 428 (642)
.||+|+||.||++.....+ +.+|+|.+...........|.+|++++++++||||+++++++...+..++||||++
T Consensus 2 ~lg~g~~g~vy~~~~~~~~-----~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 76 (252)
T cd05084 2 RIGRGNFGEVFSGRLRADN-----TPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQ 76 (252)
T ss_pred ccCcccCccEEEEEEecCC-----ceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeecc
Confidence 5899999999999987654 78999988754333344779999999999999999999999999999999999999
Q ss_pred CCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCCCc
Q 006522 429 NGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSK 508 (642)
Q Consensus 429 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 508 (642)
+++|.+++.... ..++|..+..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||+++.......
T Consensus 77 ~~~L~~~~~~~~----~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~ 149 (252)
T cd05084 77 GGDFLTFLRTEG----PRLKVKELIQMVENAAAGMEYLES---KHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVY 149 (252)
T ss_pred CCcHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHh---CCccccccchheEEEcCCCcEEECccccCcccccccc
Confidence 999999997543 248999999999999999999999 8999999999999999999999999999875432210
Q ss_pred ccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHHHhc-
Q 006522 509 VTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRE- 586 (642)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~~l~~~~~~~~~~- 586 (642)
.. .. ....++..|+|||.+.. ..++.++|||||||++|||++ |..||..... ..........
T Consensus 150 ~~-------~~---~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~-----~~~~~~~~~~~ 213 (252)
T cd05084 150 AS-------TG---GMKQIPVKWTAPEALNY-GRYSSESDVWSFGILLWEAFSLGAVPYANLSN-----QQTREAIEQGV 213 (252)
T ss_pred cc-------cC---CCCCCceeecCchhhcC-CCCChHHHHHHHHHHHHHHHhCCCCCccccCH-----HHHHHHHHcCC
Confidence 00 00 01123456999998544 678999999999999999998 8888864221 1111111111
Q ss_pred cCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHh
Q 006522 587 RRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 638 (642)
Q Consensus 587 ~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 638 (642)
..+..... ...+.+++.+||+.+|++|||+.|+.++|++
T Consensus 214 ~~~~~~~~-------------~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~ 252 (252)
T cd05084 214 RLPCPELC-------------PDAVYRLMERCWEYDPGQRPSFSTVHQELQS 252 (252)
T ss_pred CCCCcccC-------------CHHHHHHHHHHcCCChhhCcCHHHHHHHHhC
Confidence 11111111 1245678899999999999999999999863
No 88
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=9.1e-38 Score=318.84 Aligned_cols=262 Identities=24% Similarity=0.364 Sum_probs=201.8
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
...||+|+||.||++.............+++|.+..... ...+.+.+|++++++++||||+++++++...+..++||||
T Consensus 10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 88 (291)
T cd05094 10 KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTL-AARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEY 88 (291)
T ss_pred eeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccH-HHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEEEEec
Confidence 467999999999999875543333346799999875432 2236789999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcCCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEe
Q 006522 427 IRNGSLYAALHAGPSD-----------SLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCIS 495 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~ 495 (642)
+++++|.+++..+... ....++|..++.++.||+.||+|||+ .+|+||||||+||+++.++.+||+
T Consensus 89 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~ 165 (291)
T cd05094 89 MKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLAS---QHFVHRDLATRNCLVGANLLVKIG 165 (291)
T ss_pred CCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccCcceEEEccCCcEEEC
Confidence 9999999999764321 11248999999999999999999999 899999999999999999999999
Q ss_pred cccccccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcc
Q 006522 496 GFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGK 574 (642)
Q Consensus 496 DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~ 574 (642)
|||+++......... . .....++..|+|||++. +..++.++|||||||++|||+| |+.||.....
T Consensus 166 dfg~a~~~~~~~~~~-------~---~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~--- 231 (291)
T cd05094 166 DFGMSRDVYSTDYYR-------V---GGHTMLPIRWMPPESIM-YRKFTTESDVWSFGVILWEIFTYGKQPWFQLSN--- 231 (291)
T ss_pred CCCcccccCCCceee-------c---CCCCCcceeecChHHhc-cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH---
Confidence 999997654321100 0 01234567799999854 4778999999999999999999 9999864322
Q ss_pred cHHHHHHHHHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhhh
Q 006522 575 GLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 640 (642)
Q Consensus 575 ~l~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l~ 640 (642)
...++........ .. .. .....+.+++.+||+.+|++||++.+|+++|+++.
T Consensus 232 --~~~~~~~~~~~~~--~~-~~---------~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~ 283 (291)
T cd05094 232 --TEVIECITQGRVL--ER-PR---------VCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALG 283 (291)
T ss_pred --HHHHHHHhCCCCC--CC-Cc---------cCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHH
Confidence 1222222222111 10 00 01134567999999999999999999999999884
No 89
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-40 Score=300.23 Aligned_cols=244 Identities=19% Similarity=0.269 Sum_probs=193.1
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC-ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEE
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 424 (642)
..++||+|.|+.||++....++ +.+|+|++.... .....+++.+|+.|.+.++|||||++.+.+.+....|+|+
T Consensus 15 l~e~igkG~FSvVrRc~~~~tg-----~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvF 89 (355)
T KOG0033|consen 15 VKEELGKGAFSVVRRCVHKTTG-----LEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 89 (355)
T ss_pred HHHHHccCchHHHHHHHhccch-----HHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEE
Confidence 3468999999999999888776 556666554321 1123478899999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeC---CCCCeEEecccccc
Q 006522 425 DFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLD---DELHPCISGFGLNR 501 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~---~~~~~kl~DfGla~ 501 (642)
|+|+||+|..-+-.+. ..++...-.+++||+.||+|+|. ++|||||+||+|+++. ..--+|++|||+|.
T Consensus 90 e~m~G~dl~~eIV~R~-----~ySEa~aSH~~rQiLeal~yCH~---n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi 161 (355)
T KOG0033|consen 90 DLVTGGELFEDIVARE-----FYSEADASHCIQQILEALAYCHS---NGIVHRDLKPENLLLASKAKGAAVKLADFGLAI 161 (355)
T ss_pred ecccchHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHh---cCceeccCChhheeeeeccCCCceeecccceEE
Confidence 9999999987665442 37888899999999999999999 8999999999999994 34568999999999
Q ss_pred cCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHH
Q 006522 502 LLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVR 581 (642)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~ 581 (642)
.+.... .-...+|||+|||||+ .....|+..+|||+.|||||-|+.|..||.+.+. ..+.+
T Consensus 162 ~l~~g~-------------~~~G~~GtP~fmaPEv-vrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~-----~rlye 222 (355)
T KOG0033|consen 162 EVNDGE-------------AWHGFAGTPGYLSPEV-LKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ-----HRLYE 222 (355)
T ss_pred EeCCcc-------------ccccccCCCcccCHHH-hhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccH-----HHHHH
Confidence 876321 1124689999999999 4458899999999999999999999999986322 33344
Q ss_pred HHHhccCC----CccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 582 KAFRERRP----LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 582 ~~~~~~~~----~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
++...... ..+.+.++ .-+++.+++..||.+|.|+.|.++
T Consensus 223 ~I~~g~yd~~~~~w~~is~~-------------Ak~LvrrML~~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 223 QIKAGAYDYPSPEWDTVTPE-------------AKSLIRRMLTVNPKKRITADEALK 266 (355)
T ss_pred HHhccccCCCCcccCcCCHH-------------HHHHHHHHhccChhhhccHHHHhC
Confidence 44433322 23333333 334788899999999999988764
No 90
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-38 Score=308.92 Aligned_cols=259 Identities=20% Similarity=0.268 Sum_probs=196.3
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCC-CccccHHHHHHHHHHHhcccCCCeeeEEEEEEe-----CCce
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG-DATWRFKDFESEVEAIARVQHPNIVRLKAFYYA-----NDEK 420 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~-----~~~~ 420 (642)
...||+|+||.|..+....++ ..||+|++... ......++-.||+.+|+.++|+|||.+++.+.. -+..
T Consensus 27 ~~~iG~GAyGvVcsA~~~~t~-----~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~Dv 101 (359)
T KOG0660|consen 27 IEPIGRGAYGVVCSAKDKRTG-----EKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDV 101 (359)
T ss_pred cccccCcceeeEEEEEEcCCC-----CEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeeccccccccccee
Confidence 357999999999999998886 89999999854 333334788999999999999999999999876 2368
Q ss_pred EEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEeccccc
Q 006522 421 LLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLN 500 (642)
Q Consensus 421 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla 500 (642)
|+|+|+|+. ||.+.++.+. .|+......++.|+++||.|+|+ .+|+||||||+|++++.+...||+|||+|
T Consensus 102 YiV~elMet-DL~~iik~~~-----~L~d~H~q~f~YQiLrgLKyiHS---AnViHRDLKPsNll~n~~c~lKI~DFGLA 172 (359)
T KOG0660|consen 102 YLVFELMET-DLHQIIKSQQ-----DLTDDHAQYFLYQILRGLKYIHS---ANVIHRDLKPSNLLLNADCDLKICDFGLA 172 (359)
T ss_pred EEehhHHhh-HHHHHHHcCc-----cccHHHHHHHHHHHHHhcchhhc---ccccccccchhheeeccCCCEEeccccce
Confidence 999999965 9999998754 38889999999999999999999 89999999999999999999999999999
Q ss_pred ccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHH
Q 006522 501 RLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLV 580 (642)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~ 580 (642)
+...... ....-+..+.|.+|.|||+......|+.+.||||.|||+.||++|++-|.+.+.- ..+
T Consensus 173 R~~~~~~----------~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v-----~Ql 237 (359)
T KOG0660|consen 173 RYLDKFF----------EDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYV-----HQL 237 (359)
T ss_pred eeccccC----------cccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchH-----HHH
Confidence 9875430 0001124567889999999888889999999999999999999999988763221 111
Q ss_pred HHHHhccCCCcc-----ccChhhhhchhH-------------HHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 581 RKAFRERRPLSE-----VIDPALVKEIHA-------------KRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 581 ~~~~~~~~~~~~-----~~d~~l~~~~~~-------------~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
.....--+...+ +-++....-+.. ....-.++++..++|..||.+|+|++|+++
T Consensus 238 ~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~ 309 (359)
T KOG0660|consen 238 QLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALA 309 (359)
T ss_pred HHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhc
Confidence 111110000000 000000000000 001134677888999999999999999875
No 91
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.3e-38 Score=333.04 Aligned_cols=255 Identities=18% Similarity=0.239 Sum_probs=188.9
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
.+.||+|+||.||++.....+ +.||+|.... ..+.+|++++++++|||||++++++......++|+||
T Consensus 97 ~~~lg~G~~g~V~~~~d~~~~-----~~vaiK~~~~-------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~ 164 (391)
T PHA03212 97 LETFTPGAEGFAFACIDNKTC-----EHVVIKAGQR-------GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPR 164 (391)
T ss_pred EEEEcCCCCeEEEEEEECCCC-----CEEEEechhh-------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEec
Confidence 467999999999999998775 7899997532 4567999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCC
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 506 (642)
+. ++|.+++.... .+++..++.|+.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++.....
T Consensus 165 ~~-~~L~~~l~~~~-----~l~~~~~~~i~~qi~~aL~ylH~---~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~ 235 (391)
T PHA03212 165 YK-TDLYCYLAAKR-----NIAICDILAIERSVLRAIQYLHE---NRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDI 235 (391)
T ss_pred CC-CCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChHhEEEcCCCCEEEEeCCcccccccc
Confidence 95 69999886543 38899999999999999999999 89999999999999999999999999998753221
Q ss_pred CcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCc------ccHHHHH
Q 006522 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDG------KGLESLV 580 (642)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~------~~l~~~~ 580 (642)
. ........||+.|+|||++. +..++.++|||||||++|||+||+.||....... ..+...+
T Consensus 236 ~-----------~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~ 303 (391)
T PHA03212 236 N-----------ANKYYGWAGTIATNAPELLA-RDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLII 303 (391)
T ss_pred c-----------ccccccccCccCCCChhhhc-CCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHH
Confidence 1 00112346899999999854 4678999999999999999999998875432110 1111111
Q ss_pred HHHHhccCCCcc----ccChhh-------------hhch-hHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 581 RKAFRERRPLSE----VIDPAL-------------VKEI-HAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 581 ~~~~~~~~~~~~----~~d~~l-------------~~~~-~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
+........... .++... .... .......++.+++.+||+.||++|||+.|+++
T Consensus 304 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~ 375 (391)
T PHA03212 304 RRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD 375 (391)
T ss_pred HHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence 111000000000 000000 0000 00011235678999999999999999999984
No 92
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=3.8e-38 Score=327.52 Aligned_cols=197 Identities=21% Similarity=0.380 Sum_probs=168.0
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEe
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
....||+|+||.||++....++ ..+|+|.+.........+.+.+|++++++++||||++++++|...+..++|||
T Consensus 9 ~~~~lg~g~~g~V~~~~~~~~~-----~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (333)
T cd06650 9 KISELGAGNGGVVFKVSHKPSG-----LIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (333)
T ss_pred eeccccCCCCEEEEEEEECCCC-----cEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence 3467999999999999987664 78999988764333334679999999999999999999999999999999999
Q ss_pred eccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCC
Q 006522 426 FIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPG 505 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 505 (642)
|+++|+|.+++.... .+++.....++.|++.||+|||+. .+|+||||||+|||+++++.+||+|||+++....
T Consensus 84 ~~~~~~L~~~l~~~~-----~~~~~~~~~~~~~l~~~l~~lH~~--~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~ 156 (333)
T cd06650 84 HMDGGSLDQVLKKAG-----RIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 156 (333)
T ss_pred cCCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHhc--CCEEecCCChhhEEEcCCCCEEEeeCCcchhhhh
Confidence 999999999997543 388899999999999999999972 3699999999999999999999999999875432
Q ss_pred CCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCC
Q 006522 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGP 569 (642)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~ 569 (642)
.. .....|+..|+|||++. +..++.++|||||||++|||++|+.||...
T Consensus 157 ~~--------------~~~~~~~~~y~aPE~~~-~~~~~~~~DvwslG~il~~l~~g~~p~~~~ 205 (333)
T cd06650 157 SM--------------ANSFVGTRSYMSPERLQ-GTHYSVQSDIWSMGLSLVEMAIGRYPIPPP 205 (333)
T ss_pred hc--------------cccCCCCccccCHHHhc-CCCCCcHHHHHHHHHHHHHHHHCCCCCCCc
Confidence 10 11335788899999854 467899999999999999999999999753
No 93
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=1.1e-37 Score=312.98 Aligned_cols=251 Identities=25% Similarity=0.460 Sum_probs=197.1
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEe
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
....||+|++|.||++....+ +.||+|.++.... ..++|.+|+.++++++||||+++++++...+..++|||
T Consensus 10 ~~~~lg~g~~~~v~~~~~~~~------~~v~iK~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (261)
T cd05068 10 LLRKLGAGQFGEVWEGLWNNT------TPVAVKTLKPGTM--DPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTE 81 (261)
T ss_pred eEEEecccCCccEEEEEecCC------eEEEEEeeCCCcc--cHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeee
Confidence 357899999999999997655 7899999876432 23779999999999999999999999999999999999
Q ss_pred eccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCC
Q 006522 426 FIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPG 505 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 505 (642)
|+++++|.+++..... ..++|..+..++.|++.||.|||+ .+++||||||+||++++++.+||+|||+++....
T Consensus 82 ~~~~~~L~~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~ 155 (261)
T cd05068 82 LMKYGSLLEYLQGGAG---RALKLPQLIDMAAQVASGMAYLEA---QNYIHRDLAARNVLVGENNICKVADFGLARVIKE 155 (261)
T ss_pred cccCCcHHHHHhccCC---CCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCCcceEEEcCCCCEEECCcceEEEccC
Confidence 9999999999976442 248999999999999999999999 8999999999999999999999999999987652
Q ss_pred CCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHHH
Q 006522 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAF 584 (642)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~~l~~~~~~~~ 584 (642)
..... ......+..|+|||+.. +..++.++|||||||++|||+| |+.||.+... ........
T Consensus 156 ~~~~~-----------~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~-----~~~~~~~~ 218 (261)
T cd05068 156 DIYEA-----------REGAKFPIKWTAPEAAL-YNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTN-----AEVLQQVD 218 (261)
T ss_pred Ccccc-----------cCCCcCceeccCccccc-cCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCH-----HHHHHHHH
Confidence 21100 00112235699999854 4778999999999999999999 9999964321 11222221
Q ss_pred hccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhh
Q 006522 585 RERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 639 (642)
Q Consensus 585 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l 639 (642)
. ..... ..+. ....+.+++.+|++.+|++||++.++++.|+++
T Consensus 219 ~-~~~~~--~~~~---------~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~ 261 (261)
T cd05068 219 Q-GYRMP--CPPG---------CPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF 261 (261)
T ss_pred c-CCCCC--CCCc---------CCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence 1 11110 0111 113466789999999999999999999999864
No 94
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=2.6e-38 Score=329.25 Aligned_cols=248 Identities=16% Similarity=0.191 Sum_probs=195.3
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC--ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 424 (642)
...||+|+||.||+|.....+ +.||||++.... .....+.+.+|++++.+++||||+++++++...+..++||
T Consensus 6 ~~~ig~G~~g~Vy~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 6 LTQVGQGGYGQVFLAKKKDTG-----EIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred EEEEeecCCeEEEEEEECCCC-----CEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 467999999999999988764 789999997542 1223467889999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCC
Q 006522 425 DFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLP 504 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 504 (642)
||+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++...
T Consensus 81 e~~~g~~L~~~l~~~~-----~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~ 152 (333)
T cd05600 81 EYVPGGDFRTLLNNLG-----VLSEDHARFYMAEMFEAVDALHE---LGYIHRDLKPENFLIDASGHIKLTDFGLSKGIV 152 (333)
T ss_pred eCCCCCCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCCEEEEeCcCCcccc
Confidence 9999999999997543 38899999999999999999999 899999999999999999999999999987543
Q ss_pred CCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHH
Q 006522 505 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAF 584 (642)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~ 584 (642)
.. .....||+.|+|||++.. ..++.++|||||||++|||+||+.||..... ........
T Consensus 153 ~~---------------~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~ell~g~~pf~~~~~-----~~~~~~i~ 211 (333)
T cd05600 153 TY---------------ANSVVGSPDYMAPEVLRG-KGYDFTVDYWSLGCMLYEFLCGFPPFSGSTP-----NETWENLK 211 (333)
T ss_pred cc---------------cCCcccCccccChhHhcC-CCCCCccceecchHHHhhhhhCCCCCCCCCH-----HHHHHHHH
Confidence 21 113468889999998554 6889999999999999999999999975322 12222211
Q ss_pred hccCC--CccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 006522 585 RERRP--LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSES 635 (642)
Q Consensus 585 ~~~~~--~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~ 635 (642)
..... .+...++. .....++.+++.+||..+|++||++.|+++.
T Consensus 212 ~~~~~~~~~~~~~~~-------~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 212 YWKETLQRPVYDDPR-------FNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred hccccccCCCCCccc-------cccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 11110 01111110 0112345678889999999999999999853
No 95
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=4e-38 Score=319.01 Aligned_cols=247 Identities=21% Similarity=0.252 Sum_probs=190.8
Q ss_pred cCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCc--cccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEeec
Q 006522 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA--TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFI 427 (642)
Q Consensus 350 lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~ 427 (642)
||+|+||.||++.....+ +.+|+|.+..... ....+.+..|++++++++||||+++++++......++||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~-----~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~ 75 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTG-----KMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLM 75 (277)
T ss_pred CCCCCceEEEEEEEccCC-----cEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecC
Confidence 699999999999987765 8999999865321 112245667999999999999999999999999999999999
Q ss_pred cCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCCC
Q 006522 428 RNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTS 507 (642)
Q Consensus 428 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 507 (642)
++|+|.+++..... ..+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||++.......
T Consensus 76 ~g~~L~~~~~~~~~---~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~ 149 (277)
T cd05607 76 NGGDLKYHIYNVGE---RGLEMERVIHYSAQITCGILHLHS---MDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK 149 (277)
T ss_pred CCCCHHHHHHhccc---cCCCHHHHHHHHHHHHHHHHHHHH---CCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc
Confidence 99999998865443 248999999999999999999999 899999999999999999999999999987654321
Q ss_pred cccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHhcc
Q 006522 508 KVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRER 587 (642)
Q Consensus 508 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~~~ 587 (642)
. .....|+..|+|||++.. ..++.++||||+||++|||++|+.||...... .......+......
T Consensus 150 ~-------------~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~-~~~~~~~~~~~~~~ 214 (277)
T cd05607 150 T-------------ITQRAGTNGYMAPEILKE-EPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEK-VAKEELKRRTLEDE 214 (277)
T ss_pred e-------------eeccCCCCCccCHHHHcc-CCCCCchhHHHHHHHHHHHHhCCCCCCCCcch-hhHHHHHHHhhccc
Confidence 0 012357888999998554 56899999999999999999999999753221 11122222222211
Q ss_pred CCC-ccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 006522 588 RPL-SEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSES 635 (642)
Q Consensus 588 ~~~-~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~ 635 (642)
... ...++ .++.+++.+||+.||++||+++|+++.
T Consensus 215 ~~~~~~~~~-------------~~~~~li~~~L~~~P~~R~~~~~~~~~ 250 (277)
T cd05607 215 VKFEHQNFT-------------EESKDICRLFLAKKPEDRLGSREKNDD 250 (277)
T ss_pred cccccccCC-------------HHHHHHHHHHhccCHhhCCCCccchhh
Confidence 110 01111 235678889999999999999776643
No 96
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1e-37 Score=317.18 Aligned_cols=260 Identities=22% Similarity=0.320 Sum_probs=199.6
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
...||+|+||.||+|....+......+.||+|+++........+.|.+|+.++++++||||+++++++...+..++++||
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~~e~ 89 (283)
T cd05091 10 MEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSMIFSY 89 (283)
T ss_pred HHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEEEEEc
Confidence 46789999999999988654333344789999998654333346789999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcCCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEe
Q 006522 427 IRNGSLYAALHAGPS-----------DSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCIS 495 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~ 495 (642)
+++++|.+++..... .....+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+
T Consensus 90 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~---~gi~H~dlkp~Nil~~~~~~~kl~ 166 (283)
T cd05091 90 CSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSS---HHVVHKDLATRNVLVFDKLNVKIS 166 (283)
T ss_pred CCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH---cCccccccchhheEecCCCceEec
Confidence 999999999863211 011348899999999999999999999 899999999999999999999999
Q ss_pred cccccccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcc
Q 006522 496 GFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGK 574 (642)
Q Consensus 496 DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~ 574 (642)
|||+++......... ......+++.|+|||.+.. ..++.++|||||||++|||+| |..||.+..
T Consensus 167 Dfg~~~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~---- 231 (283)
T cd05091 167 DLGLFREVYAADYYK----------LMGNSLLPIRWMSPEAIMY-GKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS---- 231 (283)
T ss_pred ccccccccccchhee----------eccCccCCccccCHHHHhc-CCCCcchhHHHHHHHHHHHHcCCCCCCCCCC----
Confidence 999988654321100 0012245677999998554 678999999999999999998 888886422
Q ss_pred cHHHHHHHHHhccC-CCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHh
Q 006522 575 GLESLVRKAFRERR-PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 638 (642)
Q Consensus 575 ~l~~~~~~~~~~~~-~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 638 (642)
...+......... +..+.. ...+.+++..||+.+|++||+++||+..|+.
T Consensus 232 -~~~~~~~i~~~~~~~~~~~~-------------~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 232 -NQDVIEMIRNRQVLPCPDDC-------------PAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred -HHHHHHHHHcCCcCCCCCCC-------------CHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 1233333322221 111111 1235568899999999999999999999864
No 97
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=1.3e-37 Score=314.07 Aligned_cols=255 Identities=23% Similarity=0.347 Sum_probs=195.7
Q ss_pred cccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcc-cCCCeeeEEEEEEeCCceEEEEee
Q 006522 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 348 ~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
++||+|+||.||+|...+++. ...+++|.++........+.+.+|++++.++ +||||+++++++...+..++||||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~---~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~ 77 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGL---RMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEY 77 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCC---eeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEe
Confidence 368999999999999876531 1467889887543333346789999999999 899999999999999999999999
Q ss_pred ccCCcHHHHHhcCCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEe
Q 006522 427 IRNGSLYAALHAGPSD-----------SLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCIS 495 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~ 495 (642)
+++|+|.++++..... ....+++.++..++.|++.||+|||+ .+++||||||+||++++++.+|++
T Consensus 78 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~---~~i~H~dikp~nili~~~~~~kl~ 154 (270)
T cd05047 78 APHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIA 154 (270)
T ss_pred CCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccccceEEEcCCCeEEEC
Confidence 9999999999764321 11248999999999999999999999 899999999999999999999999
Q ss_pred cccccccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcc
Q 006522 496 GFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGK 574 (642)
Q Consensus 496 DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~ 574 (642)
|||+++...... . ......+..|+|||++. ...++.++|||||||++|||+| |..||.....
T Consensus 155 dfgl~~~~~~~~----------~---~~~~~~~~~y~apE~~~-~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~--- 217 (270)
T cd05047 155 DFGLSRGQEVYV----------K---KTMGRLPVRWMAIESLN-YSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC--- 217 (270)
T ss_pred CCCCccccchhh----------h---ccCCCCccccCChHHHc-cCCCCchhhHHHHHHHHHHHHcCCCCCccccCH---
Confidence 999986322110 0 00112345699999854 4678999999999999999997 9999964321
Q ss_pred cHHHHHHHHHhcc-CCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhhh
Q 006522 575 GLESLVRKAFRER-RPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 640 (642)
Q Consensus 575 ~l~~~~~~~~~~~-~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l~ 640 (642)
........... ......+ ...+.+++.+||+.+|.+|||+.|++..|+++-
T Consensus 218 --~~~~~~~~~~~~~~~~~~~-------------~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 218 --AELYEKLPQGYRLEKPLNC-------------DDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred --HHHHHHHhCCCCCCCCCcC-------------CHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 22222221111 1111111 124567899999999999999999999998874
No 98
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=4.8e-38 Score=317.04 Aligned_cols=260 Identities=22% Similarity=0.301 Sum_probs=189.7
Q ss_pred ccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEeecc
Q 006522 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIR 428 (642)
Q Consensus 349 ~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~ 428 (642)
.||+|+||.||+|....+ .....+++|.+...........|.+|+.+++.++||||+++++++...+..++||||++
T Consensus 2 ~lg~G~fg~v~~~~~~~~---~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~ 78 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRG---MSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCP 78 (269)
T ss_pred cCCccCCceEEEEEEecC---CCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCC
Confidence 589999999999976543 12267999988755433334678999999999999999999999999999999999999
Q ss_pred CCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCCCc
Q 006522 429 NGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSK 508 (642)
Q Consensus 429 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 508 (642)
+|+|.+++...........++.....++.||+.||+|||+ .+|+||||||+||++++++.+||+|||+++.......
T Consensus 79 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~ 155 (269)
T cd05042 79 LGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQ---ADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDY 155 (269)
T ss_pred CCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHh---cCEecccccHhheEecCCCcEEEeccccccccccchh
Confidence 9999999977543222335788889999999999999999 8999999999999999999999999999865432211
Q ss_pred ccccceeeecCCCcccccCCCcccCcccccc------CCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHH
Q 006522 509 VTKNETIVTSGTGSRISAISNVYLAPEARIY------GSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVR 581 (642)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~~l~~~~~ 581 (642)
.. . .....++..|+|||+... ...++.++|||||||++|||++ |..||...... ....
T Consensus 156 ~~-------~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~-----~~~~ 220 (269)
T cd05042 156 YI-------T---KDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDE-----QVLK 220 (269)
T ss_pred ee-------c---cCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHH-----HHHH
Confidence 00 0 012345667999998432 2356889999999999999999 78888643221 1112
Q ss_pred HHHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHH
Q 006522 582 KAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 637 (642)
Q Consensus 582 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~ 637 (642)
....... .....+.+.... ...+.+++..|| .||++|||++||++.|.
T Consensus 221 ~~~~~~~--~~~~~~~~~~~~-----~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 221 QVVREQD--IKLPKPQLDLKY-----SDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred HHhhccC--ccCCCCcccccC-----CHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 2121111 111111111111 123344677788 59999999999999874
No 99
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.7e-39 Score=297.76 Aligned_cols=248 Identities=21% Similarity=0.324 Sum_probs=199.9
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCc---cc----cHHHHHHHHHHHhcc-cCCCeeeEEEEEEeCC
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA---TW----RFKDFESEVEAIARV-QHPNIVRLKAFYYAND 418 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~----~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~ 418 (642)
.+++|.|..++|.++..+.++ +..|+|++..... .. -.+.-.+|+.||+++ .||||+++.++|+++.
T Consensus 22 keilgrgvss~vrRci~k~t~-----~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~s 96 (411)
T KOG0599|consen 22 KEILGRGVSSVVRRCIHKETG-----KEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDA 96 (411)
T ss_pred HHHhcccchhhhhhhhhcccc-----cceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcc
Confidence 468999999999999888876 7889998865421 11 124457899999999 7999999999999999
Q ss_pred ceEEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEeccc
Q 006522 419 EKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFG 498 (642)
Q Consensus 419 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfG 498 (642)
..++|+|.|+.|.|+|+|...- .++++...+|++|+..|++|||. ..||||||||+|||+|++.++||+|||
T Consensus 97 F~FlVFdl~prGELFDyLts~V-----tlSEK~tR~iMrqlfegVeylHa---~~IVHRDLKpENILlddn~~i~isDFG 168 (411)
T KOG0599|consen 97 FVFLVFDLMPRGELFDYLTSKV-----TLSEKETRRIMRQLFEGVEYLHA---RNIVHRDLKPENILLDDNMNIKISDFG 168 (411)
T ss_pred hhhhhhhhcccchHHHHhhhhe-----eecHHHHHHHHHHHHHHHHHHHH---hhhhhcccChhheeeccccceEEeccc
Confidence 9999999999999999998654 38999999999999999999999 899999999999999999999999999
Q ss_pred ccccCCCCCcccccceeeecCCCcccccCCCcccCcccccc-----CCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCc
Q 006522 499 LNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIY-----GSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDG 573 (642)
Q Consensus 499 la~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~ 573 (642)
+++.+.... ..+..||||+|.|||.+.. ...|+...|+||.|||||.|+.|.+||...
T Consensus 169 Fa~~l~~Ge-------------kLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHR---- 231 (411)
T KOG0599|consen 169 FACQLEPGE-------------KLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHR---- 231 (411)
T ss_pred eeeccCCch-------------hHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHH----
Confidence 999876542 2346799999999997432 356889999999999999999999999742
Q ss_pred ccHHHHHHHHHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 574 KGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 574 ~~l~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
+. .-.++.+..+.. +.-+|++.+ + .....+++.+|++.||.+|.|++|+++
T Consensus 232 kQ-mlMLR~ImeGky---qF~speWad-i-----s~~~KdLIsrlLqVdp~~Ritake~La 282 (411)
T KOG0599|consen 232 KQ-MLMLRMIMEGKY---QFRSPEWAD-I-----SATVKDLISRLLQVDPTKRITAKEALA 282 (411)
T ss_pred HH-HHHHHHHHhccc---ccCCcchhh-c-----cccHHHHHHHHHeeCchhcccHHHHhc
Confidence 11 112233333332 233444422 1 124556899999999999999999875
No 100
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=1.3e-37 Score=318.13 Aligned_cols=264 Identities=24% Similarity=0.366 Sum_probs=202.4
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcc-cCCCeeeEEEEEEeCCceEEEE
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLIS 424 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~ 424 (642)
....||+|+||.||++.............+|+|.+..........++.+|++++.++ +||||+++++++...+..++||
T Consensus 16 ~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~li~ 95 (293)
T cd05053 16 LGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPLYVVV 95 (293)
T ss_pred EeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCeEEEE
Confidence 356899999999999987654333344789999987654333446789999999999 8999999999999999999999
Q ss_pred eeccCCcHHHHHhcCCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeE
Q 006522 425 DFIRNGSLYAALHAGPS-----------DSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPC 493 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~k 493 (642)
||+++|+|.++++.... .....+++..+++++.|++.||+|||+ .+|+||||||+||++++++.+|
T Consensus 96 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivH~dlkp~Nil~~~~~~~k 172 (293)
T cd05053 96 EYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLAS---KKCIHRDLAARNVLVTEDHVMK 172 (293)
T ss_pred EeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH---CCccccccceeeEEEcCCCeEE
Confidence 99999999999975321 112458999999999999999999999 8999999999999999999999
Q ss_pred EecccccccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCC
Q 006522 494 ISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPEND 572 (642)
Q Consensus 494 l~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~ 572 (642)
|+|||+++.+........ . ....++..|+|||+.. +..++.++|||||||++|||++ |..||....
T Consensus 173 L~Dfg~~~~~~~~~~~~~------~----~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~el~~~g~~p~~~~~-- 239 (293)
T cd05053 173 IADFGLARDIHHIDYYRK------T----TNGRLPVKWMAPEALF-DRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP-- 239 (293)
T ss_pred eCccccccccccccceec------c----CCCCCCccccCHHHhc-cCCcCcccceeehhhHHHHHhcCCCCCCCCCC--
Confidence 999999987643221100 0 0123456799999844 4678999999999999999998 999986422
Q ss_pred cccHHHHHHHHHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhhh
Q 006522 573 GKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 640 (642)
Q Consensus 573 ~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l~ 640 (642)
..+........... . ... .....+.+++.+||+.||++|||+.|+++.|+.+.
T Consensus 240 ---~~~~~~~~~~~~~~--~-~~~---------~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 240 ---VEELFKLLKEGYRM--E-KPQ---------NCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred ---HHHHHHHHHcCCcC--C-CCC---------CCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 12222222211110 0 000 11234667999999999999999999999999863
No 101
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=7.8e-39 Score=330.91 Aligned_cols=243 Identities=24% Similarity=0.323 Sum_probs=190.7
Q ss_pred cccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCc-cccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA-TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 348 ~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
+.||+|+||.||+++...+.. ..+.||+|++..... ......+.+|++++++++||||+++++++...+..|+||||
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~--~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 79 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPD--AGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDF 79 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCC--CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcC
Confidence 468999999999998753321 127899999975421 12235678899999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCC
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 506 (642)
+++|+|.+++.... .+++..+..++.||+.||+|||+ .+|+||||||+||++++++.+||+|||+++.....
T Consensus 80 ~~~~~L~~~l~~~~-----~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~ 151 (318)
T cd05582 80 LRGGDLFTRLSKEV-----MFTEEDVKFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH 151 (318)
T ss_pred CCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHeEECCCCcEEEeeccCCcccCCC
Confidence 99999999997543 48999999999999999999999 89999999999999999999999999998764322
Q ss_pred CcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHhc
Q 006522 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE 586 (642)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~~ 586 (642)
.. ......||+.|+|||++. +..++.++|||||||++|||+||+.||.... ...........
T Consensus 152 ~~------------~~~~~~g~~~y~aPE~~~-~~~~~~~~DiwslG~il~el~tg~~p~~~~~-----~~~~~~~i~~~ 213 (318)
T cd05582 152 EK------------KAYSFCGTVEYMAPEVVN-RRGHTQSADWWSFGVLMFEMLTGSLPFQGKD-----RKETMTMILKA 213 (318)
T ss_pred CC------------ceecccCChhhcCHHHHc-CCCCCCccceeccceEeeeeccCCCCCCCCC-----HHHHHHHHHcC
Confidence 10 111346888999999854 4678999999999999999999999997532 12233333333
Q ss_pred cCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHH
Q 006522 587 RRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRT 631 (642)
Q Consensus 587 ~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~e 631 (642)
...++..+++. +.+++.+||+.||++||++.+
T Consensus 214 ~~~~p~~~~~~-------------~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 214 KLGMPQFLSPE-------------AQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred CCCCCCCCCHH-------------HHHHHHHHhhcCHhHcCCCCC
Confidence 33333333333 345778899999999999655
No 102
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=9.5e-38 Score=320.49 Aligned_cols=258 Identities=23% Similarity=0.348 Sum_probs=196.9
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcc-cCCCeeeEEEEEEeCCceEEEE
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLIS 424 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~ 424 (642)
....||+|+||.||+|.....+ ....+++|.++........+.|.+|++++.++ +||||+++++++...+..++||
T Consensus 11 ~~~~lg~G~~g~V~~a~~~~~~---~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 87 (303)
T cd05088 11 FQDVIGEGNFGQVLKARIKKDG---LRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAI 87 (303)
T ss_pred eeeeecCCCCceEEEEEEccCC---ceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEEE
Confidence 3467999999999999986542 12467888876543333446789999999999 8999999999999999999999
Q ss_pred eeccCCcHHHHHhcCCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeE
Q 006522 425 DFIRNGSLYAALHAGPSD-----------SLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPC 493 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~k 493 (642)
||+++|+|.++++..... ....+++.+++.++.|++.||+|||+ .+++||||||+|||+++++.+|
T Consensus 88 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~---~gi~H~dlkp~Nili~~~~~~k 164 (303)
T cd05088 88 EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAK 164 (303)
T ss_pred EeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHh---CCccccccchheEEecCCCcEE
Confidence 999999999999765321 11358999999999999999999999 8999999999999999999999
Q ss_pred EecccccccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCC
Q 006522 494 ISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPEND 572 (642)
Q Consensus 494 l~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~ 572 (642)
|+|||+++...... ......++..|+|||++. +..++.++|||||||++|||+| |..||.....
T Consensus 165 l~dfg~~~~~~~~~-------------~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~- 229 (303)
T cd05088 165 IADFGLSRGQEVYV-------------KKTMGRLPVRWMAIESLN-YSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC- 229 (303)
T ss_pred eCccccCcccchhh-------------hcccCCCcccccCHHHHh-ccCCcccccchhhhhHHHHHHhcCCCCcccCCh-
Confidence 99999986422110 000122355699999854 4668999999999999999998 9999964322
Q ss_pred cccHHHHHHHHHhcc-CCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhhhc
Q 006522 573 GKGLESLVRKAFRER-RPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 641 (642)
Q Consensus 573 ~~~l~~~~~~~~~~~-~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l~~ 641 (642)
.+......... ......++ ..+.+++.+||+.+|++||++.++++.|+++.+
T Consensus 230 ----~~~~~~~~~~~~~~~~~~~~-------------~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~ 282 (303)
T cd05088 230 ----AELYEKLPQGYRLEKPLNCD-------------DEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 282 (303)
T ss_pred ----HHHHHHHhcCCcCCCCCCCC-------------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 12222221111 01111111 235678999999999999999999999988743
No 103
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=4.6e-38 Score=324.47 Aligned_cols=241 Identities=20% Similarity=0.298 Sum_probs=189.1
Q ss_pred ccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC--ccccHHHHHHHHHHHhcc-cCCCeeeEEEEEEeCCceEEEEe
Q 006522 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 349 ~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
.||+|+||.||+|....++ +.||||.++... .....+.+..|..++... +||||+++++++...+..++|||
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~e 76 (316)
T cd05619 2 MLGKGSFGKVFLAELKGTN-----QFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVME 76 (316)
T ss_pred eeeeCCCEEEEEEEECCCC-----CEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEe
Confidence 6899999999999987765 789999987641 122235677888888765 99999999999999999999999
Q ss_pred eccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCC
Q 006522 426 FIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPG 505 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 505 (642)
|+++|+|.+++.... .+++.++..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 77 y~~~g~L~~~l~~~~-----~~~~~~~~~~~~qi~~al~~LH~---~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~ 148 (316)
T cd05619 77 YLNGGDLMFHIQSCH-----KFDLPRATFYAAEIICGLQFLHS---KGIVYRDLKLDNILLDTDGHIKIADFGMCKENML 148 (316)
T ss_pred CCCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHEEECCCCCEEEccCCcceECCC
Confidence 999999999997543 38899999999999999999999 8999999999999999999999999999875321
Q ss_pred CCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHh
Q 006522 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR 585 (642)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~ 585 (642)
... ......||..|+|||++. +..++.++|||||||++|||+||+.||.... .....+....
T Consensus 149 ~~~------------~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwslG~il~el~~G~~pf~~~~-----~~~~~~~i~~ 210 (316)
T cd05619 149 GDA------------KTCTFCGTPDYIAPEILL-GQKYNTSVDWWSFGVLLYEMLIGQSPFHGHD-----EEELFQSIRM 210 (316)
T ss_pred CCC------------ceeeecCCccccCHHHHc-CCCCCchhhhhhHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHh
Confidence 110 011346788999999854 4678999999999999999999999997532 1222332222
Q ss_pred ccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHH-HHH
Q 006522 586 ERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMR-TVS 633 (642)
Q Consensus 586 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~-ev~ 633 (642)
.....+..++. .+.+++.+||+.||++||++. ++.
T Consensus 211 ~~~~~~~~~~~-------------~~~~li~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05619 211 DNPCYPRWLTR-------------EAKDILVKLFVREPERRLGVKGDIR 246 (316)
T ss_pred CCCCCCccCCH-------------HHHHHHHHHhccCHhhcCCChHHHH
Confidence 22222222222 345688889999999999997 553
No 104
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=4e-38 Score=325.44 Aligned_cols=242 Identities=19% Similarity=0.277 Sum_probs=192.1
Q ss_pred ccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC--ccccHHHHHHHHHHHhcc-cCCCeeeEEEEEEeCCceEEEEe
Q 006522 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 349 ~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
.||+|+||.||+++...++ +.||||.+++.. .......+.+|++++..+ +||||+++++++...+..++|||
T Consensus 2 ~lG~G~~g~V~~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e 76 (318)
T cd05570 2 VLGKGSFGKVLLAELKGTD-----ELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVME 76 (318)
T ss_pred eeeeCCCeEEEEEEECCCC-----CEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEc
Confidence 6899999999999987764 789999997541 222336678899999888 79999999999999999999999
Q ss_pred eccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCC
Q 006522 426 FIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPG 505 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 505 (642)
|+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++....
T Consensus 77 ~~~~~~L~~~~~~~~-----~l~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 148 (318)
T cd05570 77 YVNGGDLMFHIQRSG-----RFDEPRARFYAAEIVLGLQFLHE---RGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGIL 148 (318)
T ss_pred CCCCCCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHh---CCeEccCCCHHHeEECCCCcEEecccCCCeecCc
Confidence 999999999987653 38999999999999999999999 8999999999999999999999999999865321
Q ss_pred CCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHh
Q 006522 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR 585 (642)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~ 585 (642)
.. .......||+.|+|||++. +..++.++|||||||++|||+||+.||.... ..........
T Consensus 149 ~~------------~~~~~~~g~~~y~aPE~~~-~~~~~~~~DiwslGvil~~l~~G~~pf~~~~-----~~~~~~~i~~ 210 (318)
T cd05570 149 GG------------VTTSTFCGTPDYIAPEILS-YQPYGPAVDWWALGVLLYEMLAGQSPFEGDD-----EDELFQSILE 210 (318)
T ss_pred CC------------CcccceecCccccCHHHhc-CCCCCcchhhhhHHHHHHHHhhCCCCCCCCC-----HHHHHHHHHc
Confidence 11 0111345788999999854 4778999999999999999999999997432 2223333332
Q ss_pred ccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCH-----HHHHH
Q 006522 586 ERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRM-----RTVSE 634 (642)
Q Consensus 586 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~-----~ev~~ 634 (642)
.....+..++ ..+.+++.+||+.||++||++ .++++
T Consensus 211 ~~~~~~~~~~-------------~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 211 DEVRYPRWLS-------------KEAKSILKSFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred CCCCCCCcCC-------------HHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence 2222222222 234568889999999999999 77754
No 105
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=2.1e-37 Score=312.24 Aligned_cols=257 Identities=27% Similarity=0.444 Sum_probs=199.5
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEe
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
..+.||+|+||.||+|.....++. ...+++|.++........+++..|++++++++||||+++++++...+..++|||
T Consensus 9 ~~~~lg~g~~g~vy~~~~~~~~~~--~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (268)
T cd05063 9 KQKVIGAGEFGEVFRGILKMPGRK--EVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMIITE 86 (268)
T ss_pred EeeEecCCCCccEEEEEEecCCCC--ceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEEEE
Confidence 357899999999999998754321 258999998765333334779999999999999999999999999999999999
Q ss_pred eccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCC
Q 006522 426 FIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPG 505 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 505 (642)
|+++++|.+++..... .+++.++..++.|++.||+|||+ .+++||||||+||++++++.+|++|||++.....
T Consensus 87 ~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~l~~al~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~ 159 (268)
T cd05063 87 YMENGALDKYLRDHDG----EFSSYQLVGMLRGIAAGMKYLSD---MNYVHRDLAARNILVNSNLECKVSDFGLSRVLED 159 (268)
T ss_pred cCCCCCHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchhhEEEcCCCcEEECCCccceeccc
Confidence 9999999999976432 48999999999999999999999 8999999999999999999999999999876543
Q ss_pred CCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHHH
Q 006522 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAF 584 (642)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~~l~~~~~~~~ 584 (642)
...... . ......+..|+|||++.. ..++.++|||||||++|||+| |+.||..... ..+.....
T Consensus 160 ~~~~~~------~---~~~~~~~~~y~~PE~~~~-~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~-----~~~~~~i~ 224 (268)
T cd05063 160 DPEGTY------T---TSGGKIPIRWTAPEAIAY-RKFTSASDVWSFGIVMWEVMSFGERPYWDMSN-----HEVMKAIN 224 (268)
T ss_pred ccccce------e---ccCCCcCceecCHHHhhc-CCcChHhHHHHHHHHHHHHHhCCCCCCCcCCH-----HHHHHHHh
Confidence 211100 0 001123456999998554 678999999999999999998 9999964321 22222222
Q ss_pred hc-cCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhh
Q 006522 585 RE-RRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 639 (642)
Q Consensus 585 ~~-~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l 639 (642)
.. ..+.... ....+.+++.+||+.+|++||++.+|++.|+++
T Consensus 225 ~~~~~~~~~~-------------~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 225 DGFRLPAPMD-------------CPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred cCCCCCCCCC-------------CCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 11 1111111 113456799999999999999999999999875
No 106
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=5.6e-38 Score=323.97 Aligned_cols=242 Identities=20% Similarity=0.266 Sum_probs=189.8
Q ss_pred cccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC--ccccHHHHHHHHHHHhcc-cCCCeeeEEEEEEeCCceEEEE
Q 006522 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLIS 424 (642)
Q Consensus 348 ~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~ 424 (642)
+.||+|+||.||+++....+ +.||+|.++... .....+.+..|..++... +||||+++++++...+..++||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~-----~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 75 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKG-----EYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEECCCC-----CEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEE
Confidence 36899999999999987765 789999997542 122335677888888765 8999999999999999999999
Q ss_pred eeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCC
Q 006522 425 DFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLP 504 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 504 (642)
||+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++...
T Consensus 76 E~~~~g~L~~~i~~~~-----~~~~~~~~~~~~qi~~~l~~lH~---~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~ 147 (316)
T cd05620 76 EFLNGGDLMFHIQDKG-----RFDLYRATFYAAEIVCGLQFLHS---KGIIYRDLKLDNVMLDRDGHIKIADFGMCKENV 147 (316)
T ss_pred CCCCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEeCccCCCeecc
Confidence 9999999999987643 38899999999999999999999 899999999999999999999999999986432
Q ss_pred CCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHH
Q 006522 505 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAF 584 (642)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~ 584 (642)
... .......||+.|+|||++. +..++.++||||+||++|||++|+.||.... .....+...
T Consensus 148 ~~~------------~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslGvil~el~~g~~Pf~~~~-----~~~~~~~~~ 209 (316)
T cd05620 148 FGD------------NRASTFCGTPDYIAPEILQ-GLKYTFSVDWWSFGVLLYEMLIGQSPFHGDD-----EDELFESIR 209 (316)
T ss_pred cCC------------CceeccCCCcCccCHHHHc-CCCCCcccchhhhHHHHHHHHhCCCCCCCCC-----HHHHHHHHH
Confidence 111 0111346889999999854 4778999999999999999999999997432 123333333
Q ss_pred hccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHH-HHH
Q 006522 585 RERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMR-TVS 633 (642)
Q Consensus 585 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~-ev~ 633 (642)
......+..+++. +.+++.+||+.||++||++. ++.
T Consensus 210 ~~~~~~~~~~~~~-------------~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 210 VDTPHYPRWITKE-------------SKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred hCCCCCCCCCCHH-------------HHHHHHHHccCCHHHcCCChHHHH
Confidence 3332233333332 34577889999999999985 554
No 107
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=2.5e-38 Score=327.77 Aligned_cols=238 Identities=23% Similarity=0.287 Sum_probs=187.2
Q ss_pred ccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC--ccccHHHHHHHHH-HHhcccCCCeeeEEEEEEeCCceEEEEe
Q 006522 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVE-AIARVQHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 349 ~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~-~l~~l~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
.||+|+||.||++....++ +.||+|++.... .....+++.+|.. +++.++||||+++++++...+..++|||
T Consensus 2 ~lg~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e 76 (323)
T cd05575 2 VIGKGSFGKVLLAKHKADG-----KFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLD 76 (323)
T ss_pred eeeeCCCeEEEEEEECCCC-----CEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEc
Confidence 6899999999999987765 899999987532 1122245556655 5678899999999999999999999999
Q ss_pred eccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCC
Q 006522 426 FIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPG 505 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 505 (642)
|+++|+|.+++.... .+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 77 ~~~~g~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~---~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~ 148 (323)
T cd05575 77 YVNGGELFFHLQRER-----SFPEPRARFYAAEIASALGYLHS---LNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIE 148 (323)
T ss_pred CCCCCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHeEECCCCcEEEeccCCCccccc
Confidence 999999999997643 48899999999999999999999 8999999999999999999999999999875322
Q ss_pred CCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHh
Q 006522 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR 585 (642)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~ 585 (642)
... ......||+.|+|||++. +..++.++|||||||++|||+||+.||... ...........
T Consensus 149 ~~~------------~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwslG~il~ell~g~~pf~~~-----~~~~~~~~i~~ 210 (323)
T cd05575 149 HSK------------TTSTFCGTPEYLAPEVLR-KQPYDRTVDWWCLGAVLYEMLYGLPPFYSR-----DTAEMYDNILN 210 (323)
T ss_pred CCC------------ccccccCChhhcChhhhc-CCCCCccccccccchhhhhhhcCCCCCCCC-----CHHHHHHHHHc
Confidence 110 111346888999999854 477899999999999999999999999743 22333444433
Q ss_pred ccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHH
Q 006522 586 ERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMR 630 (642)
Q Consensus 586 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ 630 (642)
....+...+++ .+.+++.+|++.||++||+++
T Consensus 211 ~~~~~~~~~~~-------------~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 211 KPLRLKPNISV-------------SARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred CCCCCCCCCCH-------------HHHHHHHHHhhcCHHhCCCCC
Confidence 33222222222 345588889999999999985
No 108
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=2.7e-37 Score=310.28 Aligned_cols=258 Identities=21% Similarity=0.353 Sum_probs=194.3
Q ss_pred cccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEe-CCceEEEEee
Q 006522 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYA-NDEKLLISDF 426 (642)
Q Consensus 348 ~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~-~~~~~lv~e~ 426 (642)
+.||+|+||.||+|...... .....||+|++.........+.+.+|+.+++.++||||+++++++.. ++..++||||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 78 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSD--GQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPY 78 (262)
T ss_pred CcccccCCceEEEEEEecCC--CceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEec
Confidence 36899999999999875432 12268999998654433345788999999999999999999998764 4568999999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCC
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 506 (642)
+.+|+|.+++..... .+++..+..++.|+++||+|||+ .+++||||||+||++++++.+||+|||+++.....
T Consensus 79 ~~~~~L~~~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~ 151 (262)
T cd05058 79 MKHGDLRNFIRSETH----NPTVKDLIGFGLQVAKGMEYLAS---KKFVHRDLAARNCMLDESFTVKVADFGLARDIYDK 151 (262)
T ss_pred CCCCCHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHh---CCccccccCcceEEEcCCCcEEECCccccccccCC
Confidence 999999999976432 36788889999999999999999 89999999999999999999999999998765432
Q ss_pred CcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhC-CCCCCCCCCCcccHHHHHHHHHh
Q 006522 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTG-RLPDAGPENDGKGLESLVRKAFR 585 (642)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG-~~P~~~~~~~~~~l~~~~~~~~~ 585 (642)
.... ........++..|+|||+... ..++.++|||||||++|||+|| ..||.... ..........
T Consensus 152 ~~~~--------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~~~~~~~~~~~-----~~~~~~~~~~ 217 (262)
T cd05058 152 EYYS--------VHNHTGAKLPVKWMALESLQT-QKFTTKSDVWSFGVLLWELMTRGAPPYPDVD-----SFDITVYLLQ 217 (262)
T ss_pred ccee--------ecccccCcCCccccChhHhcc-CccchHHHHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHHHhc
Confidence 1100 000112345667999998544 6789999999999999999995 55564321 1222332222
Q ss_pred ccCC-CccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhhhc
Q 006522 586 ERRP-LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 641 (642)
Q Consensus 586 ~~~~-~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l~~ 641 (642)
.... ....+. ..+.+++..||+.+|++||++.|+++.|+++..
T Consensus 218 ~~~~~~~~~~~-------------~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~ 261 (262)
T cd05058 218 GRRLLQPEYCP-------------DPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS 261 (262)
T ss_pred CCCCCCCCcCC-------------HHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence 2211 111111 245678999999999999999999999998754
No 109
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=2.1e-37 Score=312.83 Aligned_cols=259 Identities=23% Similarity=0.418 Sum_probs=194.9
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC-ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeC------Cc
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN------DE 419 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~------~~ 419 (642)
...||+|+||.||+|.....+. ...+|+|.++... .....+.|.+|++++++++||||+++++++... ..
T Consensus 4 ~~~ig~G~~g~V~~~~~~~~~~---~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 4 GKTLGEGEFGSVMEGQLNQDDS---ILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred ccccCcccCceEEEeEEccCCC---eeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 4679999999999999866531 2479999887542 223347889999999999999999999987542 24
Q ss_pred eEEEEeeccCCcHHHHHhcCC-CCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEeccc
Q 006522 420 KLLISDFIRNGSLYAALHAGP-SDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFG 498 (642)
Q Consensus 420 ~~lv~e~~~~gsL~~~l~~~~-~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfG 498 (642)
.++||||+++|+|.+++.... ......+++.....++.|++.||+|||+ .+|+||||||+||++++++.+||+|||
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg 157 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSS---KSFIHRDLAARNCMLNENMNVCVADFG 157 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchhheEEcCCCCEEECCCC
Confidence 689999999999999885332 1122358999999999999999999999 899999999999999999999999999
Q ss_pred ccccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcccHH
Q 006522 499 LNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLE 577 (642)
Q Consensus 499 la~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~~l~ 577 (642)
+++......... . .....+++.|+|||+.. +..++.++|||||||++|||++ |+.||..... .
T Consensus 158 ~~~~~~~~~~~~-------~---~~~~~~~~~~~~pe~~~-~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-----~ 221 (272)
T cd05075 158 LSKKIYNGDYYR-------Q---GRIAKMPVKWIAIESLA-DRVYTTKSDVWSFGVTMWEIATRGQTPYPGVEN-----S 221 (272)
T ss_pred cccccCccccee-------c---CCcccCCcccCCHHHcc-CCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCH-----H
Confidence 998764332100 0 11223566799999854 4678999999999999999999 8899865221 1
Q ss_pred HHHHHHHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhh
Q 006522 578 SLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 639 (642)
Q Consensus 578 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l 639 (642)
............ . ..+.. ...+.+++.+||+.||++|||+.|+++.|+++
T Consensus 222 ~~~~~~~~~~~~-~--~~~~~---------~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 222 EIYDYLRQGNRL-K--QPPDC---------LDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred HHHHHHHcCCCC-C--CCCCC---------CHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 222222221111 0 01111 12356789999999999999999999999875
No 110
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-39 Score=340.66 Aligned_cols=264 Identities=22% Similarity=0.366 Sum_probs=211.4
Q ss_pred HHHHhhcccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCc
Q 006522 340 EDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDE 419 (642)
Q Consensus 340 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~ 419 (642)
+|.......+||+|+||+||+|.+--. +.....+||+|.+.+........++++|+-+|++++|||+++++|+|....
T Consensus 694 kEtelkk~kvLGsgAfGtV~kGiw~Pe-ge~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~- 771 (1177)
T KOG1025|consen 694 KETELKKDKVLGSGAFGTVYKGIWIPE-GENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST- 771 (1177)
T ss_pred hhhhhhhhceeccccceeEEeeeEecC-CceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-
Confidence 444445678999999999999977544 334446899999987765555689999999999999999999999999876
Q ss_pred eEEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccc
Q 006522 420 KLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGL 499 (642)
Q Consensus 420 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGl 499 (642)
..||.+||+.|+|.++++.++. ++--...+.|..|||+||.|||+ ++++||||..+|||+.+-..+||.|||+
T Consensus 772 ~qlvtq~mP~G~LlDyvr~hr~----~igsq~lLnw~~QIAkgM~YLe~---qrlVHrdLaaRNVLVksP~hvkitdfgl 844 (1177)
T KOG1025|consen 772 LQLVTQLMPLGCLLDYVREHRD----NIGSQDLLNWCYQIAKGMKYLEE---QRLVHRDLAARNVLVKSPNHVKITDFGL 844 (1177)
T ss_pred HHHHHHhcccchHHHHHHHhhc----cccHHHHHHHHHHHHHHHHHHHh---cchhhhhhhhhheeecCCCeEEEEecch
Confidence 8899999999999999998765 37778999999999999999999 8999999999999999999999999999
Q ss_pred cccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHH
Q 006522 500 NRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLES 578 (642)
Q Consensus 500 a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~~l~~ 578 (642)
++.+..+....... ...-.+.|||-|.+.. ..|+.++|||||||++||++| |..||++...+ .+..
T Consensus 845 a~ll~~d~~ey~~~----------~gK~pikwmale~i~~-~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~--eI~d 911 (1177)
T KOG1025|consen 845 AKLLAPDEKEYSAP----------GGKVPIKWMALESIRI-RKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAE--EIPD 911 (1177)
T ss_pred hhccCccccccccc----------ccccCcHHHHHHHhhc-cCCCchhhhhhhhhhHHHHHhcCCCccCCCCHH--HhhH
Confidence 99987664322211 1223456999998554 889999999999999999999 99999875432 2333
Q ss_pred HHHHHHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhhh
Q 006522 579 LVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 640 (642)
Q Consensus 579 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l~ 640 (642)
.++...+ .+-++ -+...++.++.+||..|++.||+++++.+.+.++-
T Consensus 912 lle~geR--LsqPp-------------iCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~a 958 (1177)
T KOG1025|consen 912 LLEKGER--LSQPP-------------ICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMA 958 (1177)
T ss_pred HHhcccc--CCCCC-------------CccHHHHHHHHHHhccCcccCccHHHHHHHHHHHh
Confidence 3332211 11111 23345677899999999999999999999988874
No 111
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=1.5e-37 Score=311.17 Aligned_cols=246 Identities=22% Similarity=0.373 Sum_probs=192.8
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEe
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
..+.||+|+||.||++....+ ..+|+|.+...... ..+|.+|++++++++||||+++++++...+..++|||
T Consensus 8 ~~~~lg~G~~~~v~~~~~~~~------~~~~iK~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd05059 8 FLKELGSGQFGVVHLGKWRGK------IDVAIKMIREGAMS--EDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTE 79 (256)
T ss_pred hhhhhccCCCceEEEeEecCC------ccEEEEEeccCCCC--HHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEe
Confidence 456799999999999987654 68999998754322 2678899999999999999999999999999999999
Q ss_pred eccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCC
Q 006522 426 FIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPG 505 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 505 (642)
|+++++|.+++..... .++|..+..++.|++.||+|||+ .+++||||||+||++++++.+||+|||+++....
T Consensus 80 ~~~~~~L~~~l~~~~~----~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~ 152 (256)
T cd05059 80 YMANGCLLNYLRERKG----KLGTEWLLDMCSDVCEAMEYLES---NGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLD 152 (256)
T ss_pred cCCCCCHHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHH---CCcccccccHhhEEECCCCcEEECCcccceeccc
Confidence 9999999999976442 48999999999999999999999 8999999999999999999999999999876532
Q ss_pred CCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHHH
Q 006522 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAF 584 (642)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~~l~~~~~~~~ 584 (642)
.... . .....++..|+|||... +..++.++|||||||++|||+| |+.||..... ........
T Consensus 153 ~~~~--------~---~~~~~~~~~y~~Pe~~~-~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-----~~~~~~~~ 215 (256)
T cd05059 153 DQYT--------S---SQGTKFPVKWAPPEVFD-YSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSN-----SEVVESVS 215 (256)
T ss_pred cccc--------c---cCCCCCCccccCHHHhc-cCCCCchhhHHHHHHHHHHHhccCCCCCCCCCH-----HHHHHHHH
Confidence 2100 0 00112345699999854 4678999999999999999999 8999864322 11222221
Q ss_pred hccC-CCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHH
Q 006522 585 RERR-PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESL 636 (642)
Q Consensus 585 ~~~~-~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L 636 (642)
.... ..+... ..++.+++.+||+.+|++|||+.|+++.|
T Consensus 216 ~~~~~~~~~~~-------------~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 216 AGYRLYRPKLA-------------PTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred cCCcCCCCCCC-------------CHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 1111 111111 12456789999999999999999999886
No 112
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=2.1e-37 Score=310.12 Aligned_cols=251 Identities=20% Similarity=0.325 Sum_probs=191.9
Q ss_pred cCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEeeccC
Q 006522 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRN 429 (642)
Q Consensus 350 lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 429 (642)
||+|+||.||+|...... ....||+|.+.........+.|.+|+.++++++||||+++++++. .+..++||||+++
T Consensus 3 ig~G~~g~v~~~~~~~~~---~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~ 78 (257)
T cd05115 3 LGSGNFGCVKKGVYKMRK---KQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASG 78 (257)
T ss_pred cCCCCcccEEEEEEecCC---CceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCC
Confidence 899999999999765321 116799999876544434467999999999999999999999885 4578999999999
Q ss_pred CcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCCCcc
Q 006522 430 GSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKV 509 (642)
Q Consensus 430 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 509 (642)
|+|.+++..... .+++..+.+++.|++.||+|||+ .+++||||||+||+++.++.+||+|||+++........
T Consensus 79 ~~L~~~l~~~~~----~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~ 151 (257)
T cd05115 79 GPLNKFLSGKKD----EITVSNVVELMHQVSMGMKYLEG---KNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSY 151 (257)
T ss_pred CCHHHHHHhCCC----CCCHHHHHHHHHHHHHHHHHHHh---cCeeecccchheEEEcCCCcEEeccCCccccccCCccc
Confidence 999999975432 48999999999999999999999 89999999999999999999999999998765432211
Q ss_pred cccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHHHhccC
Q 006522 510 TKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRERR 588 (642)
Q Consensus 510 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~~l~~~~~~~~~~~~ 588 (642)
.. . .....++..|+|||.... ..++.++|||||||++||+++ |+.||..... ..+.........
T Consensus 152 ~~------~---~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-----~~~~~~~~~~~~ 216 (257)
T cd05115 152 YK------A---RSAGKWPLKWYAPECINF-RKFSSRSDVWSYGITMWEAFSYGQKPYKKMKG-----PEVMSFIEQGKR 216 (257)
T ss_pred ee------c---cCCCCCCcccCCHHHHcc-CCCCchhhHHHHHHHHHHHhcCCCCCcCcCCH-----HHHHHHHHCCCC
Confidence 00 0 011223567999998543 678999999999999999996 9999975322 122222221111
Q ss_pred -CCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhh
Q 006522 589 -PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 639 (642)
Q Consensus 589 -~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l 639 (642)
..+... ..++.+++.+||+.+|++||++.+|.+.|+.+
T Consensus 217 ~~~~~~~-------------~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 217 LDCPAEC-------------PPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred CCCCCCC-------------CHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 111111 12455688889999999999999999999865
No 113
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=1.4e-37 Score=311.18 Aligned_cols=246 Identities=22% Similarity=0.389 Sum_probs=193.7
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
...||+|+||.||++..... ..+|+|.+..... ..++|.+|+.++.+++||||+++++++...+..++||||
T Consensus 9 ~~~lg~G~~~~vy~~~~~~~------~~~aik~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd05113 9 LKELGTGQFGVVKYGKWRGQ------YDVAIKMIKEGSM--SEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEY 80 (256)
T ss_pred eeEecCcccceEEEEEecCC------CcEEEEEcCCCcc--cHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEc
Confidence 45799999999999987654 5799999875432 236799999999999999999999999988899999999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCC
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 506 (642)
+++|+|.+++..... .++|..++.++.||+.||+|||+ .+++|+||||+||++++++.+||+|||.++.....
T Consensus 81 ~~~~~l~~~i~~~~~----~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~ 153 (256)
T cd05113 81 MSNGCLLNYLREHGK----RFQPSQLLEMCKDVCEGMAYLES---KQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDD 153 (256)
T ss_pred CCCCcHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHh---CCeeccccCcceEEEcCCCCEEECCCccceecCCC
Confidence 999999999976432 48999999999999999999999 89999999999999999999999999998765432
Q ss_pred CcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHHHh
Q 006522 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFR 585 (642)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~~l~~~~~~~~~ 585 (642)
... . .....++..|+|||.... ..++.++|||||||++|||+| |+.||..... .........
T Consensus 154 ~~~--------~---~~~~~~~~~y~~pe~~~~-~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~-----~~~~~~~~~ 216 (256)
T cd05113 154 EYT--------S---SVGSKFPVRWSPPEVLLY-SKFSSKSDVWAFGVLMWEVYSLGKMPYERFNN-----SETVEKVSQ 216 (256)
T ss_pred cee--------e---cCCCccChhhCCHHHHhc-CcccchhHHHHHHHHHHHHhcCCCCCcCcCCH-----HHHHHHHhc
Confidence 110 0 011234567999998543 678999999999999999999 9999864321 122222222
Q ss_pred ccCC-CccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHH
Q 006522 586 ERRP-LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 637 (642)
Q Consensus 586 ~~~~-~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~ 637 (642)
..+. ..... ...+.+++.+||+.+|++||++.++++.|+
T Consensus 217 ~~~~~~~~~~-------------~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 217 GLRLYRPHLA-------------SEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred CCCCCCCCCC-------------CHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 2211 11111 134567889999999999999999998774
No 114
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-39 Score=344.74 Aligned_cols=262 Identities=16% Similarity=0.193 Sum_probs=200.9
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhccc-CCCeeeEEEE-EEeC------
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ-HPNIVRLKAF-YYAN------ 417 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~-~~~~------ 417 (642)
..++|.+|||+.||.|.+..++ ..+|+|++-.. +....+...+||++|++|+ |+|||.+++. ....
T Consensus 41 V~~vLAEGGFa~VYla~~~~~~-----~~~AlKrm~~~-de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~ 114 (738)
T KOG1989|consen 41 VEKVLAEGGFAQVYLAQDVKGG-----KKYALKRMYVN-DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGV 114 (738)
T ss_pred EEEEEccCCcEEEEEEEecCCC-----ceeeeeeeecC-CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCce
Confidence 4578999999999999998875 89999999876 4445688999999999995 9999999993 3221
Q ss_pred CceEEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecc
Q 006522 418 DEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGF 497 (642)
Q Consensus 418 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~Df 497 (642)
-+.+|.||||++|.|-|++..+... .|++.++++|+.|+++|+++||... ++|||||||-+||||+.++..|||||
T Consensus 115 ~EvllLmEyC~gg~Lvd~mn~Rlq~---~lte~eVLkIf~dv~~AVa~mH~~~-pPiIHRDLKiENvLls~~g~~KLCDF 190 (738)
T KOG1989|consen 115 WEVLLLMEYCKGGSLVDFMNTRLQT---RLTEDEVLKIFYDVCEAVAAMHYLK-PPIIHRDLKIENVLLSADGNYKLCDF 190 (738)
T ss_pred eEEEeehhhccCCcHHHHHHHHHhc---cCChHHHHHHHHHHHHHHHHHhcCC-CccchhhhhhhheEEcCCCCEEeCcc
Confidence 2678999999999999999876554 3999999999999999999999854 68999999999999999999999999
Q ss_pred cccccCCCCCcccccceeeecCCCcccccCCCcccCcccc--ccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCccc
Q 006522 498 GLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEAR--IYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKG 575 (642)
Q Consensus 498 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~--~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~ 575 (642)
|.+...........+...... .-...-|+.|+|||++ ..+..+++|+||||+||+||.|+....||+....-
T Consensus 191 GSatt~~~~~~~~~e~~~ve~---eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l--- 264 (738)
T KOG1989|consen 191 GSATTKILSPTSAQEVNYVEE---EIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL--- 264 (738)
T ss_pred cccccccCCCccHHHHHHHHH---HHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce---
Confidence 988643322110000000000 0012357789999973 34567899999999999999999999999753221
Q ss_pred HHHHHHHHHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhhh
Q 006522 576 LESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 640 (642)
Q Consensus 576 l~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l~ 640 (642)
.++ ...+.++.. ......+.+|+..||+.||.+||++.+|++.+-+|+
T Consensus 265 --aIl----ng~Y~~P~~-----------p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~ 312 (738)
T KOG1989|consen 265 --AIL----NGNYSFPPF-----------PNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELA 312 (738)
T ss_pred --eEE----eccccCCCC-----------ccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHh
Confidence 111 112221111 123345667999999999999999999999998875
No 115
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=2.2e-37 Score=308.62 Aligned_cols=247 Identities=23% Similarity=0.350 Sum_probs=193.0
Q ss_pred ccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEeecc
Q 006522 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIR 428 (642)
Q Consensus 349 ~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~ 428 (642)
+||+|+||.||++....+ ..+|+|.+...........|.+|++++++++||||+++++++...+..++||||++
T Consensus 2 ~ig~g~~g~vy~~~~~~~------~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 75 (250)
T cd05085 2 LLGKGNFGEVFKGTLKDK------TPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVP 75 (250)
T ss_pred ccCCCCCceEEEEEecCC------cEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCC
Confidence 689999999999987654 78999998765433333578999999999999999999999999999999999999
Q ss_pred CCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCCCc
Q 006522 429 NGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSK 508 (642)
Q Consensus 429 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 508 (642)
+|+|.+++..... .+++..+..++.|++.||.|||+ .+++||||||+||++++++.+||+|||++........
T Consensus 76 ~~~L~~~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH~---~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~ 148 (250)
T cd05085 76 GGDFLSFLRKKKD----ELKTKQLVKFALDAAAGMAYLES---KNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIY 148 (250)
T ss_pred CCcHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHh---CCeeecccChheEEEcCCCeEEECCCccceecccccc
Confidence 9999999875432 48999999999999999999999 8999999999999999999999999999875432210
Q ss_pred ccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHHHhcc
Q 006522 509 VTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRER 587 (642)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~~l~~~~~~~~~~~ 587 (642)
. ......++..|+|||+.. ...++.++|||||||++||+++ |..||..... ........ ..
T Consensus 149 ~-----------~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~-----~~~~~~~~-~~ 210 (250)
T cd05085 149 S-----------SSGLKQIPIKWTAPEALN-YGRYSSESDVWSYGILLWETFSLGVCPYPGMTN-----QQAREQVE-KG 210 (250)
T ss_pred c-----------cCCCCCCcccccCHHHhc-cCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCH-----HHHHHHHH-cC
Confidence 0 001123356799999854 4678999999999999999998 9999964321 11112111 11
Q ss_pred CCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHH
Q 006522 588 RPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 637 (642)
Q Consensus 588 ~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~ 637 (642)
.. .. .... ....+.+++.+|++.+|++||++.|++++|.
T Consensus 211 ~~-~~-~~~~---------~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 211 YR-MS-CPQK---------CPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred CC-CC-CCCC---------CCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 11 00 0111 1134667899999999999999999999875
No 116
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=1e-37 Score=304.00 Aligned_cols=265 Identities=19% Similarity=0.274 Sum_probs=198.6
Q ss_pred cccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCcc-ccHHHHHHHHHHHhcccCCC-eeeEEEEEEeCC------c
Q 006522 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT-WRFKDFESEVEAIARVQHPN-IVRLKAFYYAND------E 419 (642)
Q Consensus 348 ~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H~n-Iv~l~~~~~~~~------~ 419 (642)
+.||+|+||+||+|+....+ +.||+|+++-.... ..-....+|+.++++++|+| ||++++++...+ .
T Consensus 17 eklGeGtyg~Vykar~~~~g-----~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~ 91 (323)
T KOG0594|consen 17 EKLGEGTYGVVYKARSKRTG-----KFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGK 91 (323)
T ss_pred HHhCCCCceEEEEEEEecCC-----CEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccce
Confidence 45999999999999998876 89999999876332 22256789999999999999 999999999877 7
Q ss_pred eEEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccc
Q 006522 420 KLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGL 499 (642)
Q Consensus 420 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGl 499 (642)
.++|+||+.. +|.+++....... ..++-..+..++.||++||+|||+ ++|+||||||.|||++++|.+||+|||+
T Consensus 92 l~lvfe~~d~-DL~~ymd~~~~~~-~g~~~~~ik~~m~Qll~gl~~~H~---~~IlHRDLKPQNlLi~~~G~lKlaDFGl 166 (323)
T KOG0594|consen 92 LYLVFEFLDR-DLKKYMDSLPKKP-QGLPPRLIKSFMRQLLRGLAFLHS---HGILHRDLKPQNLLISSSGVLKLADFGL 166 (323)
T ss_pred EEEEEEeecc-cHHHHHHhccccc-cCCCHHHHHHHHHHHHHHHHHHHh---CCeecccCCcceEEECCCCcEeeeccch
Confidence 8899999976 9999998765321 236668899999999999999999 8999999999999999999999999999
Q ss_pred cccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHH
Q 006522 500 NRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESL 579 (642)
Q Consensus 500 a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~ 579 (642)
|+...-... .....++|.+|+|||++.....|++..||||+|||+.||++++.-|.+... ...+..+
T Consensus 167 Ara~~ip~~------------~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se-~~ql~~I 233 (323)
T KOG0594|consen 167 ARAFSIPMR------------TYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSE-IDQLFRI 233 (323)
T ss_pred HHHhcCCcc------------cccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcH-HHHHHHH
Confidence 996542211 122446788899999988767899999999999999999999988876433 2222222
Q ss_pred HHHHHhcc-CCCcccc-----Chhhhh-----chhHH--HHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 006522 580 VRKAFRER-RPLSEVI-----DPALVK-----EIHAK--RQVLATFHIALNCTELDPEFRPRMRTVSES 635 (642)
Q Consensus 580 ~~~~~~~~-~~~~~~~-----d~~l~~-----~~~~~--~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~ 635 (642)
.+..-... ...+... ++.... ..... .-.....+++.+|++.+|++|.|++.+++.
T Consensus 234 f~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 234 FRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred HHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 22111110 0001110 000000 00000 001356789999999999999999999875
No 117
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=2.1e-37 Score=314.81 Aligned_cols=259 Identities=26% Similarity=0.433 Sum_probs=197.1
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
...||+|+||.||+|.....+ ......|++|.+...........|.+|++++++++||||+++++++...+..++||||
T Consensus 10 ~~~lg~g~~g~vy~~~~~~~~-~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 88 (283)
T cd05090 10 MEELGECAFGKIYKGHLYLPG-MDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCMLFEY 88 (283)
T ss_pred eeeccccCCcceEEEEEecCC-CCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEEEEEc
Confidence 467999999999999863221 1123789999998654444447789999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcCCCC------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEE
Q 006522 427 IRNGSLYAALHAGPSD------------SLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCI 494 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl 494 (642)
+++|+|.+++...... ....+++.+...++.|++.||+|||+ ++++||||||+||++++++.+||
T Consensus 89 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~i~H~dlkp~nili~~~~~~kl 165 (283)
T cd05090 89 LNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSS---HFFVHKDLAARNILIGEQLHVKI 165 (283)
T ss_pred CCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---cCeehhccccceEEEcCCCcEEe
Confidence 9999999998643210 11248899999999999999999999 89999999999999999999999
Q ss_pred ecccccccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCc
Q 006522 495 SGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDG 573 (642)
Q Consensus 495 ~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~ 573 (642)
+|||+++......... ......++..|+|||++.. ..++.++|||||||++|||+| |..||.+...
T Consensus 166 ~dfg~~~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~-- 232 (283)
T cd05090 166 SDLGLSREIYSADYYR----------VQPKSLLPIRWMPPEAIMY-GKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN-- 232 (283)
T ss_pred ccccccccccCCccee----------cccCCCccceecChHHhcc-CCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH--
Confidence 9999998654321100 0112335667999998543 678999999999999999999 9999864321
Q ss_pred ccHHHHHHHHHhcc-CCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHh
Q 006522 574 KGLESLVRKAFRER-RPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 638 (642)
Q Consensus 574 ~~l~~~~~~~~~~~-~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 638 (642)
........... .+....+++ ++.+++.+||+.||++||++.++.+.|..
T Consensus 233 ---~~~~~~~~~~~~~~~~~~~~~-------------~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 233 ---QEVIEMVRKRQLLPCSEDCPP-------------RMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred ---HHHHHHHHcCCcCCCCCCCCH-------------HHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 12222221111 111222222 34568888999999999999999998864
No 118
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=4.6e-38 Score=333.18 Aligned_cols=256 Identities=19% Similarity=0.261 Sum_probs=190.8
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC--ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 424 (642)
...||+|+||.||+|.....+ +.||+|++.... .....+.+.+|++++++++|||||++++++.+.+..++||
T Consensus 6 ~~~LG~G~~g~Vy~~~~~~~~-----~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~ 80 (381)
T cd05626 6 IKTLGIGAFGEVCLACKVDTH-----ALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (381)
T ss_pred EEEEeecCCEEEEEEEECCCC-----CEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEE
Confidence 467999999999999987765 899999997642 2223467899999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCC
Q 006522 425 DFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLP 504 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 504 (642)
||+++|+|.+++.... .+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 81 E~~~gg~L~~~l~~~~-----~~~e~~~~~~~~qi~~aL~~LH~---~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~ 152 (381)
T cd05626 81 DYIPGGDMMSLLIRME-----VFPEVLARFYIAELTLAIESVHK---MGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFR 152 (381)
T ss_pred ecCCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCcHHHEEECCCCCEEEeeCcCCcccc
Confidence 9999999999997643 38889999999999999999999 899999999999999999999999999986542
Q ss_pred CCCcccc--cc---------------------------------eeeecCCCcccccCCCcccCccccccCCCCCcccch
Q 006522 505 GTSKVTK--NE---------------------------------TIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDV 549 (642)
Q Consensus 505 ~~~~~~~--~~---------------------------------~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV 549 (642)
....... .. ............+||+.|+|||++. +..++.++||
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~~~Di 231 (381)
T cd05626 153 WTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLL-RKGYTQLCDW 231 (381)
T ss_pred cccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHc-CCCCCCccce
Confidence 1110000 00 0000000012357999999999854 4678999999
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHh--ccCCCc--cccChhhhhchhHHHHHHHHHHHHHh--cCCCCC
Q 006522 550 YSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR--ERRPLS--EVIDPALVKEIHAKRQVLATFHIALN--CTELDP 623 (642)
Q Consensus 550 ~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~--~~~~~~--~~~d~~l~~~~~~~~~~~~~~~l~~~--Cl~~dP 623 (642)
|||||++|||+||+.||...... ........ .....+ ..++++ +.+++.+ |+..+|
T Consensus 232 wSlG~il~elltG~~Pf~~~~~~-----~~~~~i~~~~~~~~~~~~~~~s~~-------------~~dli~~ll~~~~~~ 293 (381)
T cd05626 232 WSVGVILFEMLVGQPPFLAPTPT-----ETQLKVINWENTLHIPPQVKLSPE-------------AVDLITKLCCSAEER 293 (381)
T ss_pred eehhhHHHHHHhCCCCCcCCCHH-----HHHHHHHccccccCCCCCCCCCHH-------------HHHHHHHHccCcccc
Confidence 99999999999999999753321 11111111 111111 112332 2334433 677788
Q ss_pred CCCCCHHHHHH
Q 006522 624 EFRPRMRTVSE 634 (642)
Q Consensus 624 ~~RPs~~ev~~ 634 (642)
..||++.|+++
T Consensus 294 ~~R~~~~~~l~ 304 (381)
T cd05626 294 LGRNGADDIKA 304 (381)
T ss_pred cCCCCHHHHhc
Confidence 88999999875
No 119
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=7e-38 Score=324.84 Aligned_cols=244 Identities=17% Similarity=0.296 Sum_probs=190.8
Q ss_pred cccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC--ccccHHHHHHHHHHHhcc-cCCCeeeEEEEEEeCCceEEEE
Q 006522 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLIS 424 (642)
Q Consensus 348 ~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~ 424 (642)
+.||+|+||.||++....++ +.||+|+++... .....+.+.+|+.++.++ +||||+++++++...+..++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~ 75 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKND-----QIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVI 75 (327)
T ss_pred CeeeeCCCeEEEEEEECCCC-----CEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEE
Confidence 36899999999999988765 899999998642 222346688999999988 6999999999999999999999
Q ss_pred eeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCC
Q 006522 425 DFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLP 504 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 504 (642)
||+++|+|.+++.... .+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 76 e~~~~~~L~~~~~~~~-----~l~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~ 147 (327)
T cd05617 76 EYVNGGDLMFHMQRQR-----KLPEEHARFYAAEICIALNFLHE---RGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGL 147 (327)
T ss_pred eCCCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEeCCCCEEEeccccceecc
Confidence 9999999999887543 38999999999999999999999 899999999999999999999999999987532
Q ss_pred CCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCC-cccHHHHH-HH
Q 006522 505 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEND-GKGLESLV-RK 582 (642)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~-~~~l~~~~-~~ 582 (642)
.... ......||+.|+|||++. +..++.++|||||||++|||+||+.||...... ......+. ..
T Consensus 148 ~~~~------------~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~ 214 (327)
T cd05617 148 GPGD------------TTSTFCGTPNYIAPEILR-GEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQV 214 (327)
T ss_pred CCCC------------ceecccCCcccCCHHHHC-CCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHH
Confidence 1110 111346889999999854 478899999999999999999999999643221 11122222 22
Q ss_pred HHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHH
Q 006522 583 AFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMR 630 (642)
Q Consensus 583 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ 630 (642)
.......++..+++. +.+++.+||+.||++||++.
T Consensus 215 ~~~~~~~~p~~~~~~-------------~~~li~~~L~~dP~~R~~~~ 249 (327)
T cd05617 215 ILEKPIRIPRFLSVK-------------ASHVLKGFLNKDPKERLGCQ 249 (327)
T ss_pred HHhCCCCCCCCCCHH-------------HHHHHHHHhccCHHHcCCCC
Confidence 222222233333332 34578889999999999853
No 120
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=7.6e-38 Score=324.35 Aligned_cols=238 Identities=22% Similarity=0.333 Sum_probs=186.1
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC--ccccHHHHHHHHHHH---hcccCCCeeeEEEEEEeCCceE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAI---ARVQHPNIVRLKAFYYANDEKL 421 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l---~~l~H~nIv~l~~~~~~~~~~~ 421 (642)
...||+|+||.||++.....+ +.||||.++... .....+.+.+|+.++ ++++||||+++++++...+..+
T Consensus 4 ~~~lg~G~~g~Vy~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~ 78 (324)
T cd05589 4 LAVLGRGHFGKVLLAEYKKTG-----ELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVC 78 (324)
T ss_pred EEEEeecCCEEEEEEEECCCC-----CEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEE
Confidence 357999999999999987654 899999997542 122235666776655 5678999999999999999999
Q ss_pred EEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccc
Q 006522 422 LISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNR 501 (642)
Q Consensus 422 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 501 (642)
+||||+++|+|..+++.. .+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++
T Consensus 79 lv~E~~~~~~L~~~~~~~------~l~~~~~~~~~~qi~~al~~lH~---~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~ 149 (324)
T cd05589 79 FVMEYAAGGDLMMHIHTD------VFSEPRAVFYAACVVLGLQYLHE---NKIVYRDLKLDNLLLDTEGFVKIADFGLCK 149 (324)
T ss_pred EEEcCCCCCcHHHHhhcC------CCCHHHHHHHHHHHHHHHHHHHh---CCeEecCCCHHHeEECCCCcEEeCcccCCc
Confidence 999999999999888642 38999999999999999999999 899999999999999999999999999987
Q ss_pred cCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHH
Q 006522 502 LLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVR 581 (642)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~ 581 (642)
...... .......||+.|+|||.+. +..++.++|||||||++|||++|+.||.... ......
T Consensus 150 ~~~~~~------------~~~~~~~g~~~y~aPE~~~-~~~~~~~~DiwslG~il~el~~G~~pf~~~~-----~~~~~~ 211 (324)
T cd05589 150 EGMGFG------------DRTSTFCGTPEFLAPEVLT-ETSYTRAVDWWGLGVLIYEMLVGESPFPGDD-----EEEVFD 211 (324)
T ss_pred cCCCCC------------CcccccccCccccCHhHhc-CCCCCcccchhhHHHHHHHHHhCCCCCCCCC-----HHHHHH
Confidence 532211 0111346888999999854 4778999999999999999999999997532 122333
Q ss_pred HHHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCH
Q 006522 582 KAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRM 629 (642)
Q Consensus 582 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~ 629 (642)
.........+..+++ .+.+++.+||+.||++||++
T Consensus 212 ~i~~~~~~~p~~~~~-------------~~~~li~~~L~~dP~~R~~~ 246 (324)
T cd05589 212 SIVNDEVRYPRFLSR-------------EAISIMRRLLRRNPERRLGS 246 (324)
T ss_pred HHHhCCCCCCCCCCH-------------HHHHHHHHHhhcCHhHcCCC
Confidence 333333222333333 23458888999999999953
No 121
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=1.5e-37 Score=318.86 Aligned_cols=259 Identities=23% Similarity=0.323 Sum_probs=200.8
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcc-cCCCeeeEEEEEEeCCceEEEE
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLIS 424 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~ 424 (642)
..+.||+|+||.||++.............||||.++........+.+.+|+++++++ +||||+++++++...+..++||
T Consensus 39 ~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 118 (302)
T cd05055 39 FGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPILVIT 118 (302)
T ss_pred EcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCceEEEE
Confidence 467899999999999986443223334689999987654443446789999999999 8999999999999999999999
Q ss_pred eeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCC
Q 006522 425 DFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLP 504 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 504 (642)
||+++|+|.++++.... ..+++.++..++.|++.||+|||+ .+|+|+||||+||+++.++.+|++|||+++...
T Consensus 119 e~~~~~~L~~~i~~~~~---~~l~~~~~~~i~~~i~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~ 192 (302)
T cd05055 119 EYCCYGDLLNFLRRKRE---SFLTLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNVLLTHGKIVKICDFGLARDIM 192 (302)
T ss_pred EcCCCCcHHHHHHhCCC---CCCCHHHHHHHHHHHHHHHHHHHH---CCeehhhhccceEEEcCCCeEEECCCccccccc
Confidence 99999999999976432 238999999999999999999999 899999999999999999999999999998654
Q ss_pred CCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHH
Q 006522 505 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKA 583 (642)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~~l~~~~~~~ 583 (642)
...... .. ....++..|+|||.+.. ..++.++||||+||++|||+| |+.||....... .....
T Consensus 193 ~~~~~~------~~----~~~~~~~~y~aPE~~~~-~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~-----~~~~~ 256 (302)
T cd05055 193 NDSNYV------VK----GNARLPVKWMAPESIFN-CVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDS-----KFYKL 256 (302)
T ss_pred CCCcee------ec----CCCCcccccCCHhhhcc-CCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchH-----HHHHH
Confidence 331100 00 12235667999998544 678999999999999999998 999987533211 11111
Q ss_pred HhccCC--CccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhh
Q 006522 584 FRERRP--LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 639 (642)
Q Consensus 584 ~~~~~~--~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l 639 (642)
...... .....+ .++.+++.+||+.+|++||++.|+++.|+++
T Consensus 257 ~~~~~~~~~~~~~~-------------~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 257 IKEGYRMAQPEHAP-------------AEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred HHcCCcCCCCCCCC-------------HHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 111111 111111 2456789999999999999999999999875
No 122
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-38 Score=323.56 Aligned_cols=259 Identities=24% Similarity=0.370 Sum_probs=212.4
Q ss_pred hcccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEE
Q 006522 345 ASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (642)
Q Consensus 345 ~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 424 (642)
....+||.|-||.||+|...... .+..-.||||..+........+.|+.|+.+|+.++|||||+++|.|.+ ...++||
T Consensus 392 tl~r~iG~GqFGdVy~gvYt~~~-kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~P~Wivm 469 (974)
T KOG4257|consen 392 TLKRLIGEGQFGDVYKGVYTDPE-KGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPMWIVM 469 (974)
T ss_pred cHHHhhcCCcccceeeeEecccc-cCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec-cceeEEE
Confidence 35689999999999999986652 222357999999886555556899999999999999999999999986 4689999
Q ss_pred eeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCC
Q 006522 425 DFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLP 504 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 504 (642)
|.++-|.|..+|+.... .|+......++.||+.||+|||+ .++|||||..+|||+.....+|++|||+++.+.
T Consensus 470 EL~~~GELr~yLq~nk~----sL~l~tL~ly~~Qi~talaYLeS---krfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~e 542 (974)
T KOG4257|consen 470 ELAPLGELREYLQQNKD----SLPLRTLTLYCYQICTALAYLES---KRFVHRDIAARNILVSSPQCVKLADFGLSRYLE 542 (974)
T ss_pred ecccchhHHHHHHhccc----cchHHHHHHHHHHHHHHHHHHHh---hchhhhhhhhhheeecCcceeeecccchhhhcc
Confidence 99999999999987664 48889999999999999999999 899999999999999999999999999999987
Q ss_pred CCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHH
Q 006522 505 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKA 583 (642)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~~l~~~~~~~ 583 (642)
+..++... ...-+..|||||.+.. ++++.++|||-|||++||++. |..||.+-.+.+.. ..-.
T Consensus 543 d~~yYkaS-----------~~kLPIKWmaPESINf-RrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI----~~iE 606 (974)
T KOG4257|consen 543 DDAYYKAS-----------RGKLPIKWMAPESINF-RRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVI----GHIE 606 (974)
T ss_pred ccchhhcc-----------ccccceeecCccccch-hcccchhhHHHHHHHHHHHHHhcCCccccccccceE----EEec
Confidence 76544321 1123456999998655 789999999999999999997 99999876553211 1111
Q ss_pred HhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhhhc
Q 006522 584 FRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 641 (642)
Q Consensus 584 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l~~ 641 (642)
..++.|.++...|.+. .++-+||..||.+||.+.|+...|..+..
T Consensus 607 nGeRlP~P~nCPp~LY-------------slmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 607 NGERLPCPPNCPPALY-------------SLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred CCCCCCCCCCCChHHH-------------HHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 2344555666666554 47777999999999999999999988753
No 123
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=3.3e-37 Score=311.45 Aligned_cols=259 Identities=23% Similarity=0.426 Sum_probs=197.7
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCc-cccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCc------
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA-TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDE------ 419 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~------ 419 (642)
.+.||+|+||.||+|....+.+ ....||+|+++.... ....+.+.+|++.+++++||||+++++++...+.
T Consensus 4 ~~~lg~G~~g~v~~~~~~~~~~--~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 81 (273)
T cd05035 4 GKILGEGEFGSVMEGQLSQDDG--SQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPK 81 (273)
T ss_pred ccccCcCCCceEEEEEEecCCC--CcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCcc
Confidence 4679999999999999865421 227899999876422 2234678999999999999999999999876554
Q ss_pred eEEEEeeccCCcHHHHHhcCCCC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEeccc
Q 006522 420 KLLISDFIRNGSLYAALHAGPSD-SLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFG 498 (642)
Q Consensus 420 ~~lv~e~~~~gsL~~~l~~~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfG 498 (642)
.++||||+++|+|.+++...... ....+++.....++.|++.||+|||+ .+++||||||+||++++++.+||+|||
T Consensus 82 ~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~dfg 158 (273)
T cd05035 82 PMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSN---RNFIHRDLAARNCMLREDMTVCVADFG 158 (273)
T ss_pred cEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHh---CCeeccccchheEEECCCCeEEECCcc
Confidence 78999999999999998654321 12358999999999999999999999 899999999999999999999999999
Q ss_pred ccccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcccHH
Q 006522 499 LNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLE 577 (642)
Q Consensus 499 la~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~~l~ 577 (642)
+++......... ......++..|+|||+. .+..++.++|||||||++|||++ |..||.+... .
T Consensus 159 ~~~~~~~~~~~~----------~~~~~~~~~~~~~pe~~-~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~-----~ 222 (273)
T cd05035 159 LSKKIYSGDYYR----------QGRIAKMPVKWIAIESL-ADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVEN-----H 222 (273)
T ss_pred ceeecccccccc----------ccccccCCccccCHhhc-ccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCH-----H
Confidence 998764332110 00112345679999985 44678999999999999999999 8899865322 1
Q ss_pred HHHHHHHhccC-CCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhh
Q 006522 578 SLVRKAFRERR-PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 639 (642)
Q Consensus 578 ~~~~~~~~~~~-~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l 639 (642)
+.......... ..... ....+.+++.+||+.||++||++.|+++.|+++
T Consensus 223 ~~~~~~~~~~~~~~~~~-------------~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 223 EIYDYLRHGNRLKQPED-------------CLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred HHHHHHHcCCCCCCCcC-------------CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 22222222111 11111 123467788999999999999999999999876
No 124
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=1.5e-37 Score=312.07 Aligned_cols=245 Identities=20% Similarity=0.314 Sum_probs=187.6
Q ss_pred ccCccCCceeEEEEecCCC-------CCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceE
Q 006522 349 VVGKSKNGIMYKVVVGRGS-------GMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKL 421 (642)
Q Consensus 349 ~lg~g~~g~vy~~~~~~~~-------~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 421 (642)
.||+|+||.||+|+..... .......|++|.+..... .....|.+|+.++++++||||+++++++......+
T Consensus 2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~-~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~ 80 (262)
T cd05077 2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHR-DISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI 80 (262)
T ss_pred ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhh-hHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence 5899999999999864321 112235689998765432 22367889999999999999999999999999999
Q ss_pred EEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCC-------eEE
Q 006522 422 LISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELH-------PCI 494 (642)
Q Consensus 422 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~-------~kl 494 (642)
+||||+++|+|..+++.... .+++..+.+++.||++||+|||+ .+|+||||||+|||++.++. +|+
T Consensus 81 lv~e~~~~~~l~~~~~~~~~----~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~~~~~~~~~l 153 (262)
T cd05077 81 MVEEFVEFGPLDLFMHRKSD----VLTTPWKFKVAKQLASALSYLED---KDLVHGNVCTKNILLAREGIDGECGPFIKL 153 (262)
T ss_pred EEEecccCCCHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHhhh---CCeECCCCCcccEEEecCCccCCCCceeEe
Confidence 99999999999998875432 48999999999999999999999 89999999999999987654 899
Q ss_pred ecccccccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHH-hCCCCCCCCCCCc
Q 006522 495 SGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEIL-TGRLPDAGPENDG 573 (642)
Q Consensus 495 ~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~-tG~~P~~~~~~~~ 573 (642)
+|||++...... ....++..|+|||.+..+..++.++|||||||++|||+ +|+.|+.....
T Consensus 154 ~d~g~~~~~~~~----------------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~-- 215 (262)
T cd05077 154 SDPGIPITVLSR----------------QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTL-- 215 (262)
T ss_pred CCCCCCccccCc----------------ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcch--
Confidence 999998654221 12346677999998654567899999999999999998 58888764221
Q ss_pred ccHHHHHHHHHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHH
Q 006522 574 KGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESL 636 (642)
Q Consensus 574 ~~l~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L 636 (642)
... ......... ...+ ....+.+++.+||+.||++||++.|+++.+
T Consensus 216 ---~~~-~~~~~~~~~---~~~~----------~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 216 ---AEK-ERFYEGQCM---LVTP----------SCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred ---hHH-HHHHhcCcc---CCCC----------ChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 111 111111111 1111 012456789999999999999999999876
No 125
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=1.1e-37 Score=314.01 Aligned_cols=258 Identities=17% Similarity=0.266 Sum_probs=201.0
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC--ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 424 (642)
...||+|+||.||+|+...++ +.||||.+.... .......|.+|++++++++||||+++++++...+..++|+
T Consensus 7 ~~~l~~g~~~~v~~~~~~~~~-----~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 7 EKKIGRGQFSEVYRATCLLDR-----KPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred eeeeccCCCeeEEEEEEeCCC-----CEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 457999999999999987665 799999876432 2223367899999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCC
Q 006522 425 DFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLP 504 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 504 (642)
||+++|+|.+++...... ...+++..+..++.|+++||+|||+ .+++||||||+||+++.++.++|+|||++....
T Consensus 82 e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~ 157 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQ-KRLIPERTVWKYFVQLCSAVEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFS 157 (267)
T ss_pred EecCCCcHHHHHHHhhhc-cCCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCCHHHEEEcCCCCEEECccccceecc
Confidence 999999999988643221 1348899999999999999999999 899999999999999999999999999987654
Q ss_pred CCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHH
Q 006522 505 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAF 584 (642)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~ 584 (642)
.... ......|+..|+|||.+.. ..++.++||||||+++|||+||+.||..... ....+.....
T Consensus 158 ~~~~------------~~~~~~~~~~~~aPE~~~~-~~~~~~~Di~slG~~l~el~~g~~p~~~~~~---~~~~~~~~~~ 221 (267)
T cd08228 158 SKTT------------AAHSLVGTPYYMSPERIHE-NGYNFKSDIWSLGCLLYEMAALQSPFYGDKM---NLFSLCQKIE 221 (267)
T ss_pred chhH------------HHhcCCCCccccChhhhcc-CCCCchhhHHHHHHHHHHHhcCCCCCccccc---cHHHHHHHHh
Confidence 3210 0112356778999998544 6788999999999999999999999864322 2223332222
Q ss_pred hccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhhh
Q 006522 585 RERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 640 (642)
Q Consensus 585 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l~ 640 (642)
....+ .... ......+.+++.+||+.+|++||++.||++.|++++
T Consensus 222 ~~~~~--~~~~---------~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 222 QCDYP--PLPT---------EHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred cCCCC--CCCh---------hhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 11111 1100 011234667888999999999999999999999986
No 126
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=1.8e-37 Score=314.28 Aligned_cols=261 Identities=22% Similarity=0.363 Sum_probs=201.7
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEe
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
....||+|+||.||++.............||+|.+...........+.+|+.++++++||||+++++++......++|||
T Consensus 10 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e 89 (277)
T cd05032 10 LIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTLVVME 89 (277)
T ss_pred EEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcEEEEe
Confidence 35789999999999999876443333478999998765433344678999999999999999999999999999999999
Q ss_pred eccCCcHHHHHhcCCCC-----CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEeccccc
Q 006522 426 FIRNGSLYAALHAGPSD-----SLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLN 500 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~-----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla 500 (642)
|+++|+|.+++...... ....++|..+..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++
T Consensus 90 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~di~p~nill~~~~~~kl~dfg~~ 166 (277)
T cd05032 90 LMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAA---KKFVHRDLAARNCMVAEDLTVKIGDFGMT 166 (277)
T ss_pred cCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccChheEEEcCCCCEEECCcccc
Confidence 99999999999754321 11247899999999999999999999 89999999999999999999999999998
Q ss_pred ccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHH
Q 006522 501 RLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESL 579 (642)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~~l~~~ 579 (642)
+.+....... ......++..|+|||.... ..++.++|||||||++||++| |+.||..... ...
T Consensus 167 ~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~t~g~~p~~~~~~-----~~~ 230 (277)
T cd05032 167 RDIYETDYYR----------KGGKGLLPVRWMAPESLKD-GVFTTKSDVWSFGVVLWEMATLAEQPYQGLSN-----EEV 230 (277)
T ss_pred hhhccCcccc----------cCCCCCccccccCHHHHhc-CCCCcccchHHHHHHHHHhhccCCCCCccCCH-----HHH
Confidence 7654332110 0112345678999998543 678999999999999999998 9999864221 222
Q ss_pred HHHHHhcc-CCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHh
Q 006522 580 VRKAFRER-RPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 638 (642)
Q Consensus 580 ~~~~~~~~-~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 638 (642)
.+...... ...+... ...+.+++.+||+.+|++|||+.|+++.|++
T Consensus 231 ~~~~~~~~~~~~~~~~-------------~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 277 (277)
T cd05032 231 LKFVIDGGHLDLPENC-------------PDKLLELMRMCWQYNPKMRPTFLEIVSSLKD 277 (277)
T ss_pred HHHHhcCCCCCCCCCC-------------CHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence 22222111 1111111 1345678999999999999999999999863
No 127
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=1.5e-37 Score=324.43 Aligned_cols=259 Identities=20% Similarity=0.269 Sum_probs=189.1
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC-ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCC-----ce
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYAND-----EK 420 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~-----~~ 420 (642)
...||+|+||.||+|.....+ ..||||++.... ......++.+|++++++++||||+++++++...+ ..
T Consensus 5 ~~~lg~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 79 (338)
T cd07859 5 QEVIGKGSYGVVCSAIDTHTG-----EKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDI 79 (338)
T ss_pred EEEEeecCCeEEEEEEECCCC-----CEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceE
Confidence 467999999999999987665 899999987532 2222357889999999999999999999986533 47
Q ss_pred EEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEeccccc
Q 006522 421 LLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLN 500 (642)
Q Consensus 421 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla 500 (642)
++||||+. ++|.+++.... .+++..+..++.||++||+|||+ .+|+||||||+|||++.++.+||+|||++
T Consensus 80 ~lv~e~~~-~~L~~~l~~~~-----~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~~~~~kL~Dfg~~ 150 (338)
T cd07859 80 YVVFELME-SDLHQVIKAND-----DLTPEHHQFFLYQLLRALKYIHT---ANVFHRDLKPKNILANADCKLKICDFGLA 150 (338)
T ss_pred EEEEecCC-CCHHHHHHhcc-----cCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCcEEEccCccc
Confidence 99999995 69999987543 38999999999999999999999 89999999999999999999999999999
Q ss_pred ccCCCCCcccccceeeecCCCcccccCCCcccCcccccc-CCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHH
Q 006522 501 RLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIY-GSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESL 579 (642)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~ 579 (642)
+........ ........||+.|+|||++.. ...++.++|||||||++|||+||+.||.+.... .....
T Consensus 151 ~~~~~~~~~---------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~--~~~~~ 219 (338)
T cd07859 151 RVAFNDTPT---------AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVV--HQLDL 219 (338)
T ss_pred cccccccCc---------cccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChH--HHHHH
Confidence 764322110 001123468889999998433 256889999999999999999999999753221 11111
Q ss_pred HHHHHhccCCCccccC-------------------hhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 580 VRKAFRERRPLSEVID-------------------PALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 580 ~~~~~~~~~~~~~~~d-------------------~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
+........ .+... ..+.... ......+.+++.+||+.||++|||+.|+++
T Consensus 220 ~~~~~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~ 289 (338)
T cd07859 220 ITDLLGTPS--PETISRVRNEKARRYLSSMRKKQPVPFSQKF--PNADPLALRLLERLLAFDPKDRPTAEEALA 289 (338)
T ss_pred HHHHhCCCC--HHHHHHhhhhhHHHHHHhhcccCCCchHHhc--CCCChHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 111110000 00000 0000000 001124567999999999999999999985
No 128
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=7.8e-38 Score=323.48 Aligned_cols=205 Identities=19% Similarity=0.318 Sum_probs=162.5
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeC--CceEEE
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN--DEKLLI 423 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~lv 423 (642)
.+..||+|+||.||+|....+. ..+.||+|.+...... ..+.+|+.++++++||||+++++++... ...++|
T Consensus 5 ~~~~lG~G~~g~Vy~~~~~~~~---~~~~~aiK~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv 78 (317)
T cd07868 5 EGCKVGRGTYGHVYKAKRKDGK---DDRDYALKQIEGTGIS---MSACREIALLRELKHPNVISLQKVFLSHADRKVWLL 78 (317)
T ss_pred cccccccCCCeEEEEEEEccCC---CCceEEEEEECCCCCc---HHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEE
Confidence 3567999999999999875431 1178999998754322 5678999999999999999999998653 467899
Q ss_pred EeeccCCcHHHHHhcCCC----CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeee----CCCCCeEEe
Q 006522 424 SDFIRNGSLYAALHAGPS----DSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILL----DDELHPCIS 495 (642)
Q Consensus 424 ~e~~~~gsL~~~l~~~~~----~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl----~~~~~~kl~ 495 (642)
|||+.+ +|.+++..... .....+++..+..++.||+.||+|||+ .+|+||||||+|||+ +.++.+||+
T Consensus 79 ~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivHrDlkp~Nil~~~~~~~~~~~kl~ 154 (317)
T cd07868 79 FDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKIA 154 (317)
T ss_pred EeccCC-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHh---CCEEcCCCCHHHEEEecCCCCcCcEEEe
Confidence 999865 89888764321 112358999999999999999999999 899999999999999 466899999
Q ss_pred cccccccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCC
Q 006522 496 GFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGP 569 (642)
Q Consensus 496 DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~ 569 (642)
|||+++........ ........||+.|+|||++.....++.++||||+||++|||+||+.||...
T Consensus 155 DfG~a~~~~~~~~~---------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~ 219 (317)
T cd07868 155 DMGFARLFNSPLKP---------LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred ecCceeccCCCCcc---------ccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence 99999875432110 011123567889999998665456899999999999999999999999754
No 129
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=5.4e-38 Score=325.58 Aligned_cols=241 Identities=22% Similarity=0.253 Sum_probs=186.9
Q ss_pred ccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC--ccccHHHHHHHHH-HHhcccCCCeeeEEEEEEeCCceEEEEe
Q 006522 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVE-AIARVQHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 349 ~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~-~l~~l~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
.||+|+||.||++....++ +.||+|++.... .......+..|.. +++.++||||+++++++...+..++|||
T Consensus 2 ~lg~G~fg~V~~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e 76 (325)
T cd05602 2 VIGKGSFGKVLLARHKAEE-----KFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLD 76 (325)
T ss_pred eeeeCCCeEEEEEEECCCC-----CEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEe
Confidence 6899999999999987765 789999987532 1112234455554 5678899999999999999999999999
Q ss_pred eccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCC
Q 006522 426 FIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPG 505 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 505 (642)
|+++|+|.+++.... .+++.....++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 77 ~~~~~~L~~~~~~~~-----~~~~~~~~~~~~qi~~~L~~lH~---~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~ 148 (325)
T cd05602 77 YINGGELFYHLQRER-----CFLEPRARFYAAEIASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIE 148 (325)
T ss_pred CCCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEEccCCCCccccc
Confidence 999999999997643 37788888999999999999999 8999999999999999999999999999875322
Q ss_pred CCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHh
Q 006522 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR 585 (642)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~ 585 (642)
.. .......||+.|+|||++. +..++.++||||+||++|||++|+.||.... ..........
T Consensus 149 ~~------------~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~el~~g~~pf~~~~-----~~~~~~~i~~ 210 (325)
T cd05602 149 HN------------GTTSTFCGTPEYLAPEVLH-KQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN-----TAEMYDNILN 210 (325)
T ss_pred CC------------CCcccccCCccccCHHHHc-CCCCCCccccccccHHHHHHhcCCCCCCCCC-----HHHHHHHHHh
Confidence 11 0112346889999999854 4778999999999999999999999997432 2233333333
Q ss_pred ccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHH
Q 006522 586 ERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVS 633 (642)
Q Consensus 586 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~ 633 (642)
........+++ .+.+++.+|++.||.+||++.+.+
T Consensus 211 ~~~~~~~~~~~-------------~~~~li~~~l~~~p~~R~~~~~~~ 245 (325)
T cd05602 211 KPLQLKPNITN-------------SARHLLEGLLQKDRTKRLGAKDDF 245 (325)
T ss_pred CCcCCCCCCCH-------------HHHHHHHHHcccCHHHCCCCCCCH
Confidence 32222222332 234577789999999999987544
No 130
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=3e-37 Score=315.85 Aligned_cols=268 Identities=24% Similarity=0.356 Sum_probs=200.3
Q ss_pred ccccCccCCceeEEEEecCCCC-----------CCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSG-----------MGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYY 415 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~-----------~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~ 415 (642)
...||+|+||.||++.....++ ......||+|.+.........+.|.+|++++++++||||+++++++.
T Consensus 10 ~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~ 89 (296)
T cd05051 10 VEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARLLGVCT 89 (296)
T ss_pred cccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEEEEEEe
Confidence 4679999999999998866432 12346799999986544444578999999999999999999999999
Q ss_pred eCCceEEEEeeccCCcHHHHHhcCCCCC------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCC
Q 006522 416 ANDEKLLISDFIRNGSLYAALHAGPSDS------LPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDE 489 (642)
Q Consensus 416 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~ 489 (642)
..+..++||||+++++|.+++....... ...+++..+..++.|++.||+|||+ .+++||||||+||+++.+
T Consensus 90 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~---~~i~H~dlkp~Nili~~~ 166 (296)
T cd05051 90 VDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLES---LNFVHRDLATRNCLVGKN 166 (296)
T ss_pred cCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHH---cCccccccchhceeecCC
Confidence 9999999999999999999997654211 1258999999999999999999999 899999999999999999
Q ss_pred CCeEEecccccccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh--CCCCCC
Q 006522 490 LHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT--GRLPDA 567 (642)
Q Consensus 490 ~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t--G~~P~~ 567 (642)
+.++|+|||+++......... ......++..|+|||+... ..++.++|||||||++|||++ |..||.
T Consensus 167 ~~~~l~dfg~~~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~~~~~~p~~ 235 (296)
T cd05051 167 YTIKIADFGMSRNLYSSDYYR----------VQGRAPLPIRWMAWESVLL-GKFTTKSDVWAFGVTLWEILTLCREQPYE 235 (296)
T ss_pred CceEEccccceeecccCccee----------ecCcCCCCceecCHHHhhc-CCCCccchhhhhHHHHHHHHhcCCCCCCC
Confidence 999999999987654321100 0112345678999998554 678999999999999999998 677775
Q ss_pred CCCCCcccHHHHHHHHHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHh
Q 006522 568 GPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 638 (642)
Q Consensus 568 ~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 638 (642)
.... ......................+ .....++.+++.+||+.||++|||+.|+++.|++
T Consensus 236 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~~ 296 (296)
T cd05051 236 HLTD--QQVIENAGHFFRDDGRQIYLPRP--------PNCPKDIYELMLECWRRDEEDRPTFREIHLFLQR 296 (296)
T ss_pred CcCh--HHHHHHHHhccccccccccCCCc--------cCCCHHHHHHHHHHhccChhcCCCHHHHHHHhcC
Confidence 4221 11111111111111000000000 0011356789999999999999999999998863
No 131
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=3.9e-37 Score=308.21 Aligned_cols=253 Identities=26% Similarity=0.394 Sum_probs=195.4
Q ss_pred ccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEeecc
Q 006522 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIR 428 (642)
Q Consensus 349 ~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~ 428 (642)
.||+|+||.||+|......+ ....+|+|.+.........+++.+|++++++++|||||++++++. .+..++||||++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~--~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~ 78 (257)
T cd05060 2 ELGHGNFGSVVKGVYLMKSG--KEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAP 78 (257)
T ss_pred ccCccCceeEEEeEeeccCC--CcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCC
Confidence 68999999999998655432 226899999986544334478999999999999999999999876 456899999999
Q ss_pred CCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCCCc
Q 006522 429 NGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSK 508 (642)
Q Consensus 429 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 508 (642)
+|+|.+++.... .+++..+..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||+++.......
T Consensus 79 ~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lh~---~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~ 150 (257)
T cd05060 79 LGPLLKYLKKRR-----EIPVSDLKELAHQVAMGMAYLES---KHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSD 150 (257)
T ss_pred CCcHHHHHHhCC-----CCCHHHHHHHHHHHHHHHHHHhh---cCeeccCcccceEEEcCCCcEEeccccccceeecCCc
Confidence 999999997654 38999999999999999999999 8999999999999999999999999999886543221
Q ss_pred ccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHHHhcc
Q 006522 509 VTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRER 587 (642)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~~l~~~~~~~~~~~ 587 (642)
.. .......++..|+|||... +..++.++|||||||++|||+| |+.||..... ..+...+ ....
T Consensus 151 ~~---------~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~--~~~~~~~---~~~~ 215 (257)
T cd05060 151 YY---------RATTAGRWPLKWYAPECIN-YGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG--AEVIAML---ESGE 215 (257)
T ss_pred cc---------ccccCccccccccCHHHhc-CCCCCccchHHHHHHHHHHHHcCCCCCcccCCH--HHHHHHH---HcCC
Confidence 10 0001122345799999854 4678999999999999999998 9999965321 1222222 1111
Q ss_pred C-CCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhhh
Q 006522 588 R-PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 640 (642)
Q Consensus 588 ~-~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l~ 640 (642)
. +....++ ..+.+++.+||+.+|++||++.++++.|+++.
T Consensus 216 ~~~~~~~~~-------------~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 216 RLPRPEECP-------------QEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred cCCCCCCCC-------------HHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 1 1111111 24567899999999999999999999999864
No 132
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=1.1e-37 Score=317.06 Aligned_cols=249 Identities=23% Similarity=0.258 Sum_probs=192.7
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCc--cccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA--TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 424 (642)
...||+|+||.||++.....+ +.||||.+..... ......+.+|+.++++++||||+++++++...+..++||
T Consensus 5 ~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 79 (285)
T cd05605 5 YRVLGKGGFGEVCACQVRATG-----KMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVL 79 (285)
T ss_pred EEEEecCCCeEEEEEEEcCCC-----ceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEE
Confidence 467999999999999987654 8999999875321 122356788999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCC
Q 006522 425 DFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLP 504 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 504 (642)
||+++|+|.+++..... ..+++..+..++.|++.||+|||+ .+++||||||+||++++++.++|+|||+++...
T Consensus 80 e~~~~~~L~~~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~ 153 (285)
T cd05605 80 TLMNGGDLKFHIYNMGN---PGFDEERAVFYAAEITCGLEDLHR---ERIVYRDLKPENILLDDYGHIRISDLGLAVEIP 153 (285)
T ss_pred eccCCCcHHHHHHhcCc---CCCCHHHHHHHHHHHHHHHHHHHH---CCcEecCCCHHHEEECCCCCEEEeeCCCceecC
Confidence 99999999998875432 248999999999999999999999 899999999999999999999999999987653
Q ss_pred CCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHH
Q 006522 505 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAF 584 (642)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~ 584 (642)
.... .....|+..|+|||++. +..++.++||||+||++|||++|+.||.+.... .....+.....
T Consensus 154 ~~~~-------------~~~~~~~~~y~aPE~~~-~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~-~~~~~~~~~~~ 218 (285)
T cd05605 154 EGET-------------IRGRVGTVGYMAPEVVK-NERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEK-VKREEVERRVK 218 (285)
T ss_pred CCCc-------------cccccCCCCccCcHHhc-CCCCCccccchhHHHHHHHHHHCCCCCCCCchh-hHHHHHHHHhh
Confidence 2210 11235788899999854 467899999999999999999999999753221 11111111111
Q ss_pred hccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCC-----CHHHHHH
Q 006522 585 RERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRP-----RMRTVSE 634 (642)
Q Consensus 585 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----s~~ev~~ 634 (642)
.........++ ..+.+++.+||+.||++|| +++++++
T Consensus 219 ~~~~~~~~~~~-------------~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05605 219 EDQEEYSEKFS-------------EAARSICRQLLTKDPGFRLGCRGEGAEEVKA 260 (285)
T ss_pred hcccccCcccC-------------HHHHHHHHHHccCCHHHhcCCCCCCHHHHhc
Confidence 11111111122 2345688889999999999 7778754
No 133
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=3.1e-37 Score=309.01 Aligned_cols=250 Identities=21% Similarity=0.326 Sum_probs=191.2
Q ss_pred ccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCc-cccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEeec
Q 006522 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA-TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFI 427 (642)
Q Consensus 349 ~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~ 427 (642)
.||+|+||.||+|...... ....+|+|+++.... ....+++.+|+.++++++||||+++++++. .+..++||||+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~ 77 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKK---SEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELA 77 (257)
T ss_pred cCCCcCCcceEEeEEecCC---CceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecC
Confidence 5899999999999754221 117899999875432 223477899999999999999999999885 45678999999
Q ss_pred cCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCCC
Q 006522 428 RNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTS 507 (642)
Q Consensus 428 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 507 (642)
++|+|.+++.... .+++..+..++.|++.||+|||+ ++|+||||||+||++++++.+||+|||+++......
T Consensus 78 ~~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~ 149 (257)
T cd05116 78 ELGPLNKFLQKNK-----HVTEKNITELVHQVSMGMKYLEE---TNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADE 149 (257)
T ss_pred CCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCEeecccchhhEEEcCCCeEEECCCccccccCCCC
Confidence 9999999997543 38999999999999999999999 899999999999999999999999999998764332
Q ss_pred cccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHHHhc
Q 006522 508 KVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRE 586 (642)
Q Consensus 508 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~~l~~~~~~~~~~ 586 (642)
.... . .....++..|+|||.+. ...++.++|||||||++|||+| |+.||..... ..+.......
T Consensus 150 ~~~~------~---~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~-----~~~~~~i~~~ 214 (257)
T cd05116 150 NYYK------A---KTHGKWPVKWYAPECMN-YYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKG-----NEVTQMIESG 214 (257)
T ss_pred Ceee------e---cCCCCCCccccCHhHhc-cCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHHCC
Confidence 1100 0 01123456799999854 4678899999999999999998 9999975321 1222222221
Q ss_pred -cCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHh
Q 006522 587 -RRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 638 (642)
Q Consensus 587 -~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 638 (642)
..+.+..+++ ++.+++.+||+.||++||++.+|++.|+.
T Consensus 215 ~~~~~~~~~~~-------------~l~~li~~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 215 ERMECPQRCPP-------------EMYDLMKLCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred CCCCCCCCCCH-------------HHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence 1122222222 34568888999999999999999999975
No 134
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=3.4e-37 Score=321.94 Aligned_cols=264 Identities=23% Similarity=0.351 Sum_probs=198.3
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcc-cCCCeeeEEEEEEeCC-ceEEE
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYAND-EKLLI 423 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~-~~~lv 423 (642)
....||+|+||.||+|...........+.||||+++..........+.+|+.++.++ +|||||++++++...+ ..++|
T Consensus 11 ~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv 90 (343)
T cd05103 11 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI 90 (343)
T ss_pred ccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCceEEE
Confidence 457899999999999986433223334789999997654333346788999999999 7899999999887654 67899
Q ss_pred EeeccCCcHHHHHhcCCCC-------------------------------------------------------------
Q 006522 424 SDFIRNGSLYAALHAGPSD------------------------------------------------------------- 442 (642)
Q Consensus 424 ~e~~~~gsL~~~l~~~~~~------------------------------------------------------------- 442 (642)
|||+++|+|.++++.....
T Consensus 91 ~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (343)
T cd05103 91 VEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAEQED 170 (343)
T ss_pred EeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhhhhhh
Confidence 9999999999999753210
Q ss_pred -CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCCCcccccceeeecCCC
Q 006522 443 -SLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTG 521 (642)
Q Consensus 443 -~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~ 521 (642)
....++|..+..++.||++||+|||+ .+|+||||||+||++++++.+||+|||+++..........
T Consensus 171 ~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~---------- 237 (343)
T cd05103 171 LYKKVLTLEDLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVR---------- 237 (343)
T ss_pred hhhccCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhh----------
Confidence 01247899999999999999999999 8999999999999999999999999999976533211100
Q ss_pred cccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHHHhc-cCCCccccChhhh
Q 006522 522 SRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRE-RRPLSEVIDPALV 599 (642)
Q Consensus 522 ~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~d~~l~ 599 (642)
.....++..|+|||.+. +..++.++|||||||++|||++ |..||....... ......... ....+...++
T Consensus 238 ~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~--- 309 (343)
T cd05103 238 KGDARLPLKWMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE----EFCRRLKEGTRMRAPDYTTP--- 309 (343)
T ss_pred cCCCCCCcceECcHHhc-CCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccH----HHHHHHhccCCCCCCCCCCH---
Confidence 01223456799999854 4678999999999999999997 999987533221 111111111 1111222222
Q ss_pred hchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhhh
Q 006522 600 KEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 640 (642)
Q Consensus 600 ~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l~ 640 (642)
++.+++..||+.||++||++.|+++.|+.+.
T Consensus 310 ----------~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~ 340 (343)
T cd05103 310 ----------EMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 340 (343)
T ss_pred ----------HHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 3567888999999999999999999999874
No 135
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=1.3e-37 Score=322.66 Aligned_cols=239 Identities=18% Similarity=0.260 Sum_probs=189.1
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC--ccccHHHHHHHHHHHhcccC-CCeeeEEEEEEeCCceEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQH-PNIVRLKAFYYANDEKLLI 423 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H-~nIv~l~~~~~~~~~~~lv 423 (642)
...||+|+||.||+|.....+ +.||||++.... .....+.+..|++++..++| ++|+++++++...+..|+|
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~~-----~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv 79 (324)
T cd05587 5 LMVLGKGSFGKVMLAERKGTD-----ELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFV 79 (324)
T ss_pred EEEEeeccCeEEEEEEECCCC-----CEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEE
Confidence 467999999999999987764 789999987531 22234678899999999976 4688899999999999999
Q ss_pred EeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccC
Q 006522 424 SDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLL 503 (642)
Q Consensus 424 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 503 (642)
|||+++|+|.+++.... .+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 80 ~E~~~~g~L~~~~~~~~-----~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~ 151 (324)
T cd05587 80 MEYVNGGDLMYHIQQVG-----KFKEPHAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDAEGHIKIADFGMCKEN 151 (324)
T ss_pred EcCCCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEEcCCCCEEEeecCcceec
Confidence 99999999999997543 38899999999999999999999 89999999999999999999999999998643
Q ss_pred CCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHH
Q 006522 504 PGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKA 583 (642)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~ 583 (642)
.... .......||+.|+|||++. +..++.++||||+||++|||+||+.||.... ........
T Consensus 152 ~~~~------------~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslGvil~elltG~~pf~~~~-----~~~~~~~i 213 (324)
T cd05587 152 IFGG------------KTTRTFCGTPDYIAPEIIA-YQPYGKSVDWWAFGVLLYEMLAGQPPFDGED-----EDELFQSI 213 (324)
T ss_pred CCCC------------CceeeecCCccccChhhhc-CCCCCcccchhhhHHHHHHHHhCCCCCCCCC-----HHHHHHHH
Confidence 2111 0112346889999999854 4678999999999999999999999997532 12233333
Q ss_pred HhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCH
Q 006522 584 FRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRM 629 (642)
Q Consensus 584 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~ 629 (642)
......++..+++ ++.+++.+||+.||++|++.
T Consensus 214 ~~~~~~~~~~~~~-------------~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 214 MEHNVSYPKSLSK-------------EAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred HcCCCCCCCCCCH-------------HHHHHHHHHhhcCHHHcCCC
Confidence 3333333333332 34568888999999999986
No 136
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=3.1e-37 Score=315.83 Aligned_cols=256 Identities=23% Similarity=0.361 Sum_probs=195.9
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcc-cCCCeeeEEEEEEeCCceEEEEe
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
..+||+|+||.||+|+...++. ...+++|.++........+.|.+|++++.++ +||||+++++++...+..++|+|
T Consensus 7 ~~~lg~g~~g~v~~~~~~~~~~---~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e 83 (297)
T cd05089 7 EDVIGEGNFGQVIRAMIKKDGL---KMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIAIE 83 (297)
T ss_pred eeeecCCCcceEEEEEecCCCC---cceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEEEE
Confidence 4679999999999999876531 1357888887533333346789999999999 79999999999999999999999
Q ss_pred eccCCcHHHHHhcCCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEE
Q 006522 426 FIRNGSLYAALHAGPSD-----------SLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCI 494 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl 494 (642)
|+++|+|.++++..... ....+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||
T Consensus 84 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~~kl 160 (297)
T cd05089 84 YAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSE---KQFIHRDLAARNVLVGENLASKI 160 (297)
T ss_pred ecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCcCCcceEEECCCCeEEE
Confidence 99999999999764321 11248999999999999999999999 89999999999999999999999
Q ss_pred ecccccccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCc
Q 006522 495 SGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDG 573 (642)
Q Consensus 495 ~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~ 573 (642)
+|||++....... . ......+..|+|||+.. ...++.++|||||||++|||+| |+.||.....
T Consensus 161 ~dfg~~~~~~~~~----------~---~~~~~~~~~y~aPE~~~-~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~-- 224 (297)
T cd05089 161 ADFGLSRGEEVYV----------K---KTMGRLPVRWMAIESLN-YSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTC-- 224 (297)
T ss_pred CCcCCCcccccee----------c---cCCCCcCccccCchhhc-cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH--
Confidence 9999986432110 0 00112245699999854 3678999999999999999998 9999975322
Q ss_pred ccHHHHHHHHHhcc-CCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhhh
Q 006522 574 KGLESLVRKAFRER-RPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 640 (642)
Q Consensus 574 ~~l~~~~~~~~~~~-~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l~ 640 (642)
........... ......++ ..+.+++.+||+.+|.+||++.++++.|+.+.
T Consensus 225 ---~~~~~~~~~~~~~~~~~~~~-------------~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~ 276 (297)
T cd05089 225 ---AELYEKLPQGYRMEKPRNCD-------------DEVYELMRQCWRDRPYERPPFAQISVQLSRML 276 (297)
T ss_pred ---HHHHHHHhcCCCCCCCCCCC-------------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 22222222211 11111122 23456888999999999999999999998874
No 137
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=9.6e-38 Score=328.96 Aligned_cols=250 Identities=18% Similarity=0.219 Sum_probs=192.4
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC--ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEE
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLI 423 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 423 (642)
....||+|+||.||++....++ +.||+|.+.... .....+.+.+|+.+++.++||||+++++++...+..++|
T Consensus 47 ~~~~lg~G~~g~Vy~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv 121 (370)
T cd05596 47 VIKVIGRGAFGEVQLVRHKSSK-----QVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMV 121 (370)
T ss_pred EEEEEeeCCCEEEEEEEECCCC-----CEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEE
Confidence 3578999999999999987765 799999986531 122235678999999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccC
Q 006522 424 SDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLL 503 (642)
Q Consensus 424 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 503 (642)
|||+++|+|.+++... .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 122 ~Ey~~gg~L~~~l~~~------~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~ 192 (370)
T cd05596 122 MEYMPGGDLVNLMSNY------DIPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKM 192 (370)
T ss_pred EcCCCCCcHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEcCCCCEEEEeccceeec
Confidence 9999999999998653 27888889999999999999999 89999999999999999999999999998765
Q ss_pred CCCCcccccceeeecCCCcccccCCCcccCccccccC---CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHH
Q 006522 504 PGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYG---SKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLV 580 (642)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~ 580 (642)
..... .......||+.|+|||++... ..++.++|||||||++|||+||+.||.... .....
T Consensus 193 ~~~~~-----------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~-----~~~~~ 256 (370)
T cd05596 193 DANGM-----------VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS-----LVGTY 256 (370)
T ss_pred cCCCc-----------ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCC-----HHHHH
Confidence 42211 011134689999999985432 247899999999999999999999997532 22223
Q ss_pred HHHHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCC--CCCHHHHHH
Q 006522 581 RKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEF--RPRMRTVSE 634 (642)
Q Consensus 581 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~--RPs~~ev~~ 634 (642)
.........+. .|... .....+.+++.+|++.+|++ ||++.|+++
T Consensus 257 ~~i~~~~~~~~---~~~~~------~~s~~~~~li~~~L~~~p~r~~R~s~~ell~ 303 (370)
T cd05596 257 SKIMDHKNSLT---FPDDI------EISKQAKDLICAFLTDREVRLGRNGVDEIKS 303 (370)
T ss_pred HHHHcCCCcCC---CCCcC------CCCHHHHHHHHHHccChhhccCCCCHHHHhc
Confidence 33322211110 00000 01123456888899999987 999999865
No 138
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=4.5e-37 Score=311.37 Aligned_cols=260 Identities=25% Similarity=0.375 Sum_probs=197.4
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
.+.||+|++|.||+|......+......|++|.............|.+|+.++++++|+||+++++++...+..++||||
T Consensus 11 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 90 (277)
T cd05036 11 LRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRFILLEL 90 (277)
T ss_pred eeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCcEEEEec
Confidence 46799999999999998763222233789999887544333346799999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcCCCC--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCC---CeEEecccccc
Q 006522 427 IRNGSLYAALHAGPSD--SLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDEL---HPCISGFGLNR 501 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~---~~kl~DfGla~ 501 (642)
+++|+|.+++...... ....++|..++.++.||+.||+|||+ .+++||||||+||+++.++ .+||+|||+++
T Consensus 91 ~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~ 167 (277)
T cd05036 91 MAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEE---NHFIHRDIAARNCLLTCKGPGRVAKIADFGMAR 167 (277)
T ss_pred CCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccchheEEEeccCCCcceEeccCcccc
Confidence 9999999999765421 12358999999999999999999999 8999999999999998654 69999999998
Q ss_pred cCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHH
Q 006522 502 LLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLV 580 (642)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~~l~~~~ 580 (642)
.......... ......+..|+|||++. +..++.++|||||||++|||+| |+.||..... ....
T Consensus 168 ~~~~~~~~~~----------~~~~~~~~~y~aPE~~~-~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~-----~~~~ 231 (277)
T cd05036 168 DIYRASYYRK----------GGRAMLPIKWMPPEAFL-DGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTN-----QEVM 231 (277)
T ss_pred ccCCccceec----------CCCCCccHhhCCHHHHh-cCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH-----HHHH
Confidence 7633211000 00112345699999854 4679999999999999999997 9999975322 1222
Q ss_pred HHHHhccC-CCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHh
Q 006522 581 RKAFRERR-PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 638 (642)
Q Consensus 581 ~~~~~~~~-~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 638 (642)
........ ..+..+ ...+.+++.+||+.+|++||++.+|++.|++
T Consensus 232 ~~~~~~~~~~~~~~~-------------~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~~ 277 (277)
T cd05036 232 EFVTGGGRLDPPKGC-------------PGPVYRIMTDCWQHTPEDRPNFATILERIQY 277 (277)
T ss_pred HHHHcCCcCCCCCCC-------------CHHHHHHHHHHcCCCcccCcCHHHHHHHhhC
Confidence 22221111 111111 1245678899999999999999999998863
No 139
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=1.3e-37 Score=322.53 Aligned_cols=239 Identities=18% Similarity=0.270 Sum_probs=189.4
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC--ccccHHHHHHHHHHHhcc-cCCCeeeEEEEEEeCCceEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLI 423 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv 423 (642)
...||+|+||.||+|....++ +.||+|.+.+.. .....+.+..|..++..+ +|++|+++++++...+..++|
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv 79 (323)
T cd05616 5 LMVLGKGSFGKVMLAERKGTD-----ELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFV 79 (323)
T ss_pred EEEEeeCCCeEEEEEEECCCC-----CEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEE
Confidence 467999999999999987765 799999987642 122335677888888887 689999999999999999999
Q ss_pred EeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccC
Q 006522 424 SDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLL 503 (642)
Q Consensus 424 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 503 (642)
|||+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++..
T Consensus 80 ~E~~~~g~L~~~~~~~~-----~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~ 151 (323)
T cd05616 80 MEYVNGGDLMYQIQQVG-----RFKEPHAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKEN 151 (323)
T ss_pred EcCCCCCCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCEEecCCCHHHeEECCCCcEEEccCCCceec
Confidence 99999999999987643 38899999999999999999999 89999999999999999999999999998753
Q ss_pred CCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHH
Q 006522 504 PGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKA 583 (642)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~ 583 (642)
.... .......||+.|+|||++. +..++.++|||||||++|||+||+.||..... .......
T Consensus 152 ~~~~------------~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~-----~~~~~~i 213 (323)
T cd05616 152 MWDG------------VTTKTFCGTPDYIAPEIIA-YQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE-----DELFQSI 213 (323)
T ss_pred CCCC------------CccccCCCChhhcCHHHhc-CCCCCCccchhchhHHHHHHHhCCCCCCCCCH-----HHHHHHH
Confidence 2211 0112346889999999855 47789999999999999999999999975321 2233333
Q ss_pred HhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCH
Q 006522 584 FRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRM 629 (642)
Q Consensus 584 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~ 629 (642)
.......+..+++ ++.+++.+|++.||++|++.
T Consensus 214 ~~~~~~~p~~~s~-------------~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 214 MEHNVAYPKSMSK-------------EAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred HhCCCCCCCcCCH-------------HHHHHHHHHcccCHHhcCCC
Confidence 3333222222222 34568888999999999984
No 140
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=3.9e-37 Score=312.20 Aligned_cols=258 Identities=24% Similarity=0.407 Sum_probs=196.8
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
.+.||+|+||.||+|.....+. .....||+|.+.........+++.+|+.+++.++||||+++++++.. ...++++||
T Consensus 12 ~~~lg~G~~g~vy~~~~~~~~~-~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~l~~~~ 89 (279)
T cd05109 12 VKVLGSGAFGTVYKGIWIPDGE-NVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQLVTQL 89 (279)
T ss_pred eeecCCCCCceEEEEEEecCCC-ccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcEEEEEc
Confidence 4689999999999998654421 11246899998765444445788999999999999999999999975 457899999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCC
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 506 (642)
+++|+|.++++.... .+++..++.++.|++.||+|||+ ++|+||||||+||++++++.+||+|||+++.....
T Consensus 90 ~~~g~l~~~l~~~~~----~~~~~~~~~~~~qi~~~L~~lH~---~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~ 162 (279)
T cd05109 90 MPYGCLLDYVRENKD----RIGSQDLLNWCVQIAKGMSYLEE---VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDID 162 (279)
T ss_pred CCCCCHHHHHhhccC----CCCHHHHHHHHHHHHHHHHHHHH---CCeeccccccceEEEcCCCcEEECCCCceeecccc
Confidence 999999999976432 48999999999999999999999 89999999999999999999999999999876432
Q ss_pred CcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHHHh
Q 006522 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFR 585 (642)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~~l~~~~~~~~~ 585 (642)
.... . .....++..|+|||... +..++.++|||||||++|||+| |..||..... ..+..++...
T Consensus 163 ~~~~-------~---~~~~~~~~~y~~PE~~~-~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--~~~~~~~~~~-- 227 (279)
T cd05109 163 ETEY-------H---ADGGKVPIKWMALESIL-HRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPA--REIPDLLEKG-- 227 (279)
T ss_pred ccee-------e---cCCCccchhhCCHHHhc-cCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHHCC--
Confidence 1100 0 01123456799999854 4678999999999999999998 8999864321 1122222211
Q ss_pred ccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhhhc
Q 006522 586 ERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 641 (642)
Q Consensus 586 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l~~ 641 (642)
...+..... ...+.+++.+||+.||++||++.|+++.|+.+..
T Consensus 228 ~~~~~~~~~-------------~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05109 228 ERLPQPPIC-------------TIDVYMIMVKCWMIDSECRPRFRELVDEFSRMAR 270 (279)
T ss_pred CcCCCCccC-------------CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 111111111 1245668889999999999999999999988753
No 141
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.5e-37 Score=316.59 Aligned_cols=264 Identities=22% Similarity=0.340 Sum_probs=201.2
Q ss_pred cccccCccCCceeEEEEecCC--CCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcc-cCCCeeeEEEEEEeCCceEE
Q 006522 346 SAYVVGKSKNGIMYKVVVGRG--SGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLL 422 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~--~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~l 422 (642)
....||+|+||.||++..... ........||+|.+.........+++.+|+.+++.+ +||||+++++++......++
T Consensus 19 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~l 98 (304)
T cd05101 19 LGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV 98 (304)
T ss_pred ecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecCCceEE
Confidence 457899999999999975321 111223689999987643333447789999999999 89999999999999999999
Q ss_pred EEeeccCCcHHHHHhcCCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCC
Q 006522 423 ISDFIRNGSLYAALHAGPSD-----------SLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELH 491 (642)
Q Consensus 423 v~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~ 491 (642)
||||+++|+|.+++...... ....++|.++..++.||++||+|||+ .+++||||||+||++++++.
T Consensus 99 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~---~givH~dlkp~Nili~~~~~ 175 (304)
T cd05101 99 IVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLAS---QKCIHRDLAARNVLVTENNV 175 (304)
T ss_pred EEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHH---CCeeecccccceEEEcCCCc
Confidence 99999999999999764321 11358899999999999999999999 89999999999999999999
Q ss_pred eEEecccccccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCC
Q 006522 492 PCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPE 570 (642)
Q Consensus 492 ~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~ 570 (642)
+||+|||+++......... ......++..|+|||+.. +..++.++|||||||++|||+| |..||...
T Consensus 176 ~kl~D~g~~~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~~l~el~~~g~~p~~~~- 243 (304)
T cd05101 176 MKIADFGLARDVNNIDYYK----------KTTNGRLPVKWMAPEALF-DRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI- 243 (304)
T ss_pred EEECCCccceecccccccc----------cccCCCCCceeeCchhhc-cCCCCchhhHHHHHHHHHHHHcCCCCCcccC-
Confidence 9999999998664321110 011223556799999854 3678999999999999999998 78888642
Q ss_pred CCcccHHHHHHHHHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhhh
Q 006522 571 NDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 640 (642)
Q Consensus 571 ~~~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l~ 640 (642)
....+.......... .. .. .....+.+++.+||+.+|++||++.|+++.|+++.
T Consensus 244 ----~~~~~~~~~~~~~~~-~~--~~---------~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~ 297 (304)
T cd05101 244 ----PVEELFKLLKEGHRM-DK--PA---------NCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRIL 297 (304)
T ss_pred ----CHHHHHHHHHcCCcC-CC--CC---------CCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHH
Confidence 223333333222111 00 00 11234566889999999999999999999999874
No 142
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=5.5e-38 Score=325.55 Aligned_cols=242 Identities=23% Similarity=0.272 Sum_probs=187.9
Q ss_pred ccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC--ccccHHHHHHHHH-HHhcccCCCeeeEEEEEEeCCceEEEEe
Q 006522 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVE-AIARVQHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 349 ~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~-~l~~l~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
.||+|+||.||++....++ +.+|+|++.... .....+.+.+|.. +++.++||||+++++++...+..++|||
T Consensus 2 ~lG~G~~g~V~~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e 76 (325)
T cd05604 2 VIGKGSFGKVLLAKRKLDG-----KCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLD 76 (325)
T ss_pred ceeeCCCeEEEEEEECCCC-----CEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEc
Confidence 6899999999999987665 899999987541 1122245666665 4677899999999999999999999999
Q ss_pred eccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCC
Q 006522 426 FIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPG 505 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 505 (642)
|+++|+|.+++.... .+++..+..++.||+.||+|||+ .+|+||||||+|||+++++.+||+|||+++....
T Consensus 77 ~~~~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~al~~lH~---~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~ 148 (325)
T cd05604 77 FVNGGELFFHLQRER-----SFPEPRARFYAAEIASALGYLHS---INIVYRDLKPENILLDSQGHVVLTDFGLCKEGIA 148 (325)
T ss_pred CCCCCCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEEeecCCcccCCC
Confidence 999999999887543 48999999999999999999999 8999999999999999999999999999875321
Q ss_pred CCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHh
Q 006522 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR 585 (642)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~ 585 (642)
.. .......||+.|+|||++. +..++.++|||||||++|||++|+.||.... .....+....
T Consensus 149 ~~------------~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwslG~il~el~~G~~pf~~~~-----~~~~~~~~~~ 210 (325)
T cd05604 149 QS------------DTTTTFCGTPEYLAPEVIR-KQPYDNTVDWWCLGAVLYEMLYGLPPFYCRD-----VAEMYDNILH 210 (325)
T ss_pred CC------------CCcccccCChhhCCHHHHc-CCCCCCcCccccccceehhhhcCCCCCCCCC-----HHHHHHHHHc
Confidence 11 0112346889999999854 4778999999999999999999999997532 2233333333
Q ss_pred ccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 586 ERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 586 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
.........+ ..+.+++.+|++.+|++||++++.++
T Consensus 211 ~~~~~~~~~~-------------~~~~~ll~~ll~~~p~~R~~~~~~~~ 246 (325)
T cd05604 211 KPLVLRPGAS-------------LTAWSILEELLEKDRQRRLGAKEDFL 246 (325)
T ss_pred CCccCCCCCC-------------HHHHHHHHHHhccCHHhcCCCCCCHH
Confidence 2221111122 23456888899999999999864433
No 143
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=4.1e-37 Score=314.69 Aligned_cols=267 Identities=22% Similarity=0.356 Sum_probs=196.9
Q ss_pred ccccCccCCceeEEEEecCCCC---------CCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeC
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSG---------MGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN 417 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~---------~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~ 417 (642)
.+.||+|+||.||+++...... .+....||+|.++..........|.+|++++++++||||+++++++...
T Consensus 10 ~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~ 89 (295)
T cd05097 10 KEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLGVCVSD 89 (295)
T ss_pred hhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEcCC
Confidence 4679999999999998754321 1233579999987653333446799999999999999999999999999
Q ss_pred CceEEEEeeccCCcHHHHHhcCCCC-------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCC
Q 006522 418 DEKLLISDFIRNGSLYAALHAGPSD-------SLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDEL 490 (642)
Q Consensus 418 ~~~~lv~e~~~~gsL~~~l~~~~~~-------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~ 490 (642)
+..++||||+++++|.+++...... ....++|..+..++.|++.||+|||+ .+++||||||+||++++++
T Consensus 90 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~i~H~dlkp~Nill~~~~ 166 (295)
T cd05097 90 DPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLAS---LNFVHRDLATRNCLVGNHY 166 (295)
T ss_pred CccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHh---cCeeccccChhhEEEcCCC
Confidence 9999999999999999999654211 11247899999999999999999999 8999999999999999999
Q ss_pred CeEEecccccccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh--CCCCCCC
Q 006522 491 HPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT--GRLPDAG 568 (642)
Q Consensus 491 ~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t--G~~P~~~ 568 (642)
.+||+|||+++........ . . .....++..|+|||+... ..++.++|||||||++|||+| |..||..
T Consensus 167 ~~kl~dfg~~~~~~~~~~~------~-~---~~~~~~~~~y~aPE~~~~-~~~~~~~DvwSlG~~l~el~~~~~~~p~~~ 235 (295)
T cd05097 167 TIKIADFGMSRNLYSGDYY------R-I---QGRAVLPIRWMAWESILL-GKFTTASDVWAFGVTLWEMFTLCKEQPYSL 235 (295)
T ss_pred cEEecccccccccccCcce------e-c---cCcCcCceeecChhhhcc-CCcCchhhHHHHHHHHHHHHHcCCCCCCcc
Confidence 9999999998765322110 0 0 012244667999998554 678999999999999999998 6677764
Q ss_pred CCCCcccHHHHHHHHHhcc-CCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHh
Q 006522 569 PENDGKGLESLVRKAFRER-RPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 638 (642)
Q Consensus 569 ~~~~~~~l~~~~~~~~~~~-~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 638 (642)
... .............. ........+. ....+.+++.+||+.||++||+|.+|++.|++
T Consensus 236 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~~ 295 (295)
T cd05097 236 LSD--EQVIENTGEFFRNQGRQIYLSQTPL---------CPSPVFKLMMRCWSRDIKDRPTFNKIHHFLRE 295 (295)
T ss_pred cCh--HHHHHHHHHhhhhccccccCCCCCC---------CCHHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence 322 11111111111111 0000000110 11356779999999999999999999998863
No 144
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=1.1e-37 Score=316.97 Aligned_cols=271 Identities=23% Similarity=0.350 Sum_probs=195.2
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeC--CceEEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN--DEKLLIS 424 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~lv~ 424 (642)
...||+|+||+||.+...... ......||+|.++........+.|.+|++++++++||||+++++++... ...++||
T Consensus 9 ~~~lg~g~~g~v~~~~~~~~~-~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~ 87 (283)
T cd05080 9 IRVLGEGHFGKVSLYCYDPAN-DGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLIM 87 (283)
T ss_pred ceecccCCCcEEEEeeEcccc-CCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEEe
Confidence 467999999999887643211 1122689999987653333347789999999999999999999998764 3578999
Q ss_pred eeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCC
Q 006522 425 DFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLP 504 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 504 (642)
||+++|+|.+++... .++|.++..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++...
T Consensus 88 e~~~~~~l~~~~~~~------~l~~~~~~~i~~~l~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~ 158 (283)
T cd05080 88 EYVPLGSLRDYLPKH------KLNLAQLLLFAQQICEGMAYLHS---QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 158 (283)
T ss_pred cCCCCCCHHHHHHHc------CCCHHHHHHHHHHHHHHHHHHHH---CCeeccccChheEEEcCCCcEEEeecccccccC
Confidence 999999999999753 38999999999999999999999 899999999999999999999999999998664
Q ss_pred CCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHH
Q 006522 505 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAF 584 (642)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~ 584 (642)
....... ......++..|+|||... +..++.++|||||||++|||+||..|+....... ........
T Consensus 159 ~~~~~~~---------~~~~~~~~~~~~~PE~~~-~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~---~~~~~~~~ 225 (283)
T cd05080 159 EGHEYYR---------VREDGDSPVFWYAVECLK-ENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKF---EEMIGPKQ 225 (283)
T ss_pred Ccchhhc---------cCCCCCCCceeeCHhHhc-ccCCCcccccHHHHHHHHHHHhCCCCCCCCcchh---hhhhcccc
Confidence 3221100 001223456699999854 4678999999999999999999999986432211 00000000
Q ss_pred hcc--CCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhhhc
Q 006522 585 RER--RPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 641 (642)
Q Consensus 585 ~~~--~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l~~ 641 (642)
... ..+.+.++...... .......++.+++..||+.+|++|||++++++.|+++.+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~~ 283 (283)
T cd05080 226 GQMTVVRLIELLERGMRLP-CPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMHH 283 (283)
T ss_pred cccchhhhhhhhhcCCCCC-CCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhhC
Confidence 000 00000000000000 000112456779999999999999999999999998753
No 145
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=8.4e-38 Score=323.64 Aligned_cols=239 Identities=19% Similarity=0.262 Sum_probs=186.2
Q ss_pred cccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC--ccccHHHHHHHHH-HHhcccCCCeeeEEEEEEeCCceEEEE
Q 006522 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVE-AIARVQHPNIVRLKAFYYANDEKLLIS 424 (642)
Q Consensus 348 ~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~-~l~~l~H~nIv~l~~~~~~~~~~~lv~ 424 (642)
++||+|+||.||+++...++ +.||+|.+.... .......+.+|.. +++.++||||+++++++...+..++||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 75 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDG-----SFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVL 75 (321)
T ss_pred CeeeeCCCEEEEEEEECCCC-----CEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEE
Confidence 36899999999999987765 899999987532 1122245556654 578899999999999999999999999
Q ss_pred eeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCC
Q 006522 425 DFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLP 504 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 504 (642)
||+++|+|.+.+.... .+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++...
T Consensus 76 e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~L~~lH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~ 147 (321)
T cd05603 76 DYVNGGELFFHLQRER-----CFLEPRARFYAAEVASAIGYLHS---LNIIYRDLKPENILLDSQGHVVLTDFGLCKEGV 147 (321)
T ss_pred cCCCCCCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEccCCCCccCC
Confidence 9999999999886543 37888999999999999999999 899999999999999999999999999987532
Q ss_pred CCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHH
Q 006522 505 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAF 584 (642)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~ 584 (642)
.... ......||+.|+|||++. +..++.++|||||||++|||+||+.||.... .........
T Consensus 148 ~~~~------------~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~el~~g~~pf~~~~-----~~~~~~~i~ 209 (321)
T cd05603 148 EPEE------------TTSTFCGTPEYLAPEVLR-KEPYDRTVDWWCLGAVLYEMLYGLPPFYSRD-----VSQMYDNIL 209 (321)
T ss_pred CCCC------------ccccccCCcccCCHHHhc-CCCCCCcCcccccchhhhhhhcCCCCCCCCC-----HHHHHHHHh
Confidence 2110 111346888999999854 4678999999999999999999999997532 233333333
Q ss_pred hccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHH
Q 006522 585 RERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMR 630 (642)
Q Consensus 585 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ 630 (642)
.....++...+ ..+.+++.+|++.||++||+..
T Consensus 210 ~~~~~~~~~~~-------------~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 210 HKPLQLPGGKT-------------VAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred cCCCCCCCCCC-------------HHHHHHHHHHccCCHhhcCCCC
Confidence 33222221111 2355688889999999999764
No 146
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.8e-37 Score=337.33 Aligned_cols=250 Identities=21% Similarity=0.286 Sum_probs=195.8
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC-ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCC-------
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYAND------- 418 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~------- 418 (642)
.+.||+|+||.||+++....+ +.||||.+.... .......+.+|+.++..++|+||+++++.+...+
T Consensus 37 ~~~LG~G~fG~Vy~a~~~~~g-----~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~ 111 (496)
T PTZ00283 37 SRVLGSGATGTVLCAKRVSDG-----EPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENV 111 (496)
T ss_pred EEEEecCCCEEEEEEEEcCCC-----CEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcccc
Confidence 568999999999999987654 899999987542 2233467889999999999999999988776432
Q ss_pred -ceEEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecc
Q 006522 419 -EKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGF 497 (642)
Q Consensus 419 -~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~Df 497 (642)
..++||||+++|+|.++++..... ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+||
T Consensus 112 ~~i~lV~Ey~~~gsL~~~l~~~~~~-~~~l~e~~~~~i~~qll~aL~~lH~---~~IiHrDLKP~NILl~~~~~vkL~DF 187 (496)
T PTZ00283 112 LMIALVLDYANAGDLRQEIKSRAKT-NRTFREHEAGLLFIQVLLAVHHVHS---KHMIHRDIKSANILLCSNGLVKLGDF 187 (496)
T ss_pred eEEEEEEeCCCCCcHHHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEeCCCCEEEEec
Confidence 367999999999999999764332 2358999999999999999999999 89999999999999999999999999
Q ss_pred cccccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHH
Q 006522 498 GLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLE 577 (642)
Q Consensus 498 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~ 577 (642)
|+++.+...... .......||+.|+|||++. +..++.++|||||||++|||+||+.||... ...
T Consensus 188 Gls~~~~~~~~~----------~~~~~~~Gt~~Y~aPE~~~-~~~~s~k~DVwSlGvilyeLltG~~Pf~~~-----~~~ 251 (496)
T PTZ00283 188 GFSKMYAATVSD----------DVGRTFCGTPYYVAPEIWR-RKPYSKKADMFSLGVLLYELLTLKRPFDGE-----NME 251 (496)
T ss_pred ccCeeccccccc----------cccccccCCcceeCHHHhC-CCCCCcHHHHHHHHHHHHHHHHCCCCCCCC-----CHH
Confidence 999865432110 0112456899999999854 467899999999999999999999999742 233
Q ss_pred HHHHHHHhccC-CCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 578 SLVRKAFRERR-PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 578 ~~~~~~~~~~~-~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
..+........ +++..+++ ++.+++.+||+.||++||++.++++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~-------------~l~~li~~~L~~dP~~RPs~~ell~ 296 (496)
T PTZ00283 252 EVMHKTLAGRYDPLPPSISP-------------EMQEIVTALLSSDPKRRPSSSKLLN 296 (496)
T ss_pred HHHHHHhcCCCCCCCCCCCH-------------HHHHHHHHHcccChhhCcCHHHHHh
Confidence 34444333221 22222222 3456888899999999999999876
No 147
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=5.6e-37 Score=308.96 Aligned_cols=257 Identities=26% Similarity=0.433 Sum_probs=198.2
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEe
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
..+.||+|+||.||+|.....++ ....+|+|.++........+.|.+|+.++++++||||+++++++...+..++|||
T Consensus 8 ~~~~lg~g~~g~v~~~~~~~~~~--~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (267)
T cd05066 8 IEKVIGAGEFGEVCSGRLKLPGK--REIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVTE 85 (267)
T ss_pred eeeeecccCCCceEEEEEecCCC--CceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEE
Confidence 35789999999999998754321 1158999998765433345789999999999999999999999999999999999
Q ss_pred eccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCC
Q 006522 426 FIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPG 505 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 505 (642)
|+++|+|.+++..... .+++.++..++.|++.||+|||+ .+++||||||+||+++.++.+|++|||+++....
T Consensus 86 ~~~~~~L~~~~~~~~~----~~~~~~~~~i~~~i~~~l~~lH~---~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd05066 86 YMENGSLDAFLRKHDG----QFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILVNSNLVCKVSDFGLSRVLED 158 (267)
T ss_pred cCCCCCHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHH---CCEeehhhchhcEEECCCCeEEeCCCCccccccc
Confidence 9999999999976532 48999999999999999999999 8999999999999999999999999999987643
Q ss_pred CCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHHH
Q 006522 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAF 584 (642)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~~l~~~~~~~~ 584 (642)
..... . . .....++..|+|||++.. ..++.++|||||||++||+++ |+.||..... ........
T Consensus 159 ~~~~~-----~-~---~~~~~~~~~y~~pe~~~~-~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~-----~~~~~~~~ 223 (267)
T cd05066 159 DPEAA-----Y-T---TRGGKIPIRWTAPEAIAY-RKFTSASDVWSYGIVMWEVMSYGERPYWEMSN-----QDVIKAIE 223 (267)
T ss_pred cccee-----e-e---cCCCccceeecCHhHhcc-CccCchhhhHHHHHHHHHHhcCCCCCcccCCH-----HHHHHHHh
Confidence 21100 0 0 011223457999998543 678999999999999999887 9999865322 11222221
Q ss_pred hcc-CCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhh
Q 006522 585 RER-RPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 639 (642)
Q Consensus 585 ~~~-~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l 639 (642)
... .+....++ ..+.+++.+||+.+|++||+|.++++.|+++
T Consensus 224 ~~~~~~~~~~~~-------------~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 224 EGYRLPAPMDCP-------------AALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred CCCcCCCCCCCC-------------HHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 111 11111111 2345688899999999999999999999875
No 148
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-39 Score=330.99 Aligned_cols=257 Identities=25% Similarity=0.353 Sum_probs=202.9
Q ss_pred ccHHHHHhhcccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEe
Q 006522 337 LELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYA 416 (642)
Q Consensus 337 ~~~~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~ 416 (642)
++++--.....-++|+|.||+||.|++..+. ..+|||-+...++. ..+-+..||.+-++++|.|||+++|.+.+
T Consensus 570 feYeyde~~ervVLGKGTYG~VYA~RD~~tq-----vrIaIKEIpekdsr-~~QPLhEEIaLH~~LrHkNIVrYLGs~se 643 (1226)
T KOG4279|consen 570 FEYEYDESNERVVLGKGTYGTVYAARDMDTQ-----VRIAIKEIPEKDSR-EVQPLHEEIALHSTLRHKNIVRYLGSVSE 643 (1226)
T ss_pred EEeeecCCCceEEeecCceeEEEeeccccce-----eEEEeeecccccch-hhccHHHHHHHHHHHhhHhHHHHhhccCC
Confidence 4444334445679999999999999998886 78999999876443 23567889999999999999999999999
Q ss_pred CCceEEEEeeccCCcHHHHHhcCCCCCCCCC--CHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeC-CCCCeE
Q 006522 417 NDEKLLISDFIRNGSLYAALHAGPSDSLPPL--PWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLD-DELHPC 493 (642)
Q Consensus 417 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l--~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~-~~~~~k 493 (642)
++..-+.||.++||+|.++|+..= .|+ ++.+.-.+.+||++||.|||+ +.|||||||-+|||++ -.|.+|
T Consensus 644 nGf~kIFMEqVPGGSLSsLLrskW----GPlKDNEstm~fYtkQILeGLkYLHe---n~IVHRDIKGDNVLvNTySGvlK 716 (1226)
T KOG4279|consen 644 NGFFKIFMEQVPGGSLSSLLRSKW----GPLKDNESTMNFYTKQILEGLKYLHE---NKIVHRDIKGDNVLVNTYSGVLK 716 (1226)
T ss_pred CCeEEEEeecCCCCcHHHHHHhcc----CCCccchhHHHHHHHHHHHHhhhhhh---cceeeccccCCcEEEeeccceEE
Confidence 999999999999999999998643 346 788889999999999999999 8999999999999996 579999
Q ss_pred EecccccccCCCCCcccccceeeecCCCcccccCCCcccCccccccC-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCC
Q 006522 494 ISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYG-SKFTQKCDVYSFGIVLLEILTGRLPDAGPEND 572 (642)
Q Consensus 494 l~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~ 572 (642)
|+|||.++.+..-. .-+.+..||..|||||++..| +.|+.++|||||||++.||.||++||......
T Consensus 717 ISDFGTsKRLAgin------------P~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgsp 784 (1226)
T KOG4279|consen 717 ISDFGTSKRLAGIN------------PCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSP 784 (1226)
T ss_pred ecccccchhhccCC------------ccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCCh
Confidence 99999998765321 112245789999999997664 46999999999999999999999999754332
Q ss_pred cccHHHHHHHH-HhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 573 GKGLESLVRKA-FRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 573 ~~~l~~~~~~~-~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
-...++.. +...+++++.++ .++-.++++|..+||.+||++.++++
T Consensus 785 ---qAAMFkVGmyKvHP~iPeels-------------aeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 785 ---QAAMFKVGMYKVHPPIPEELS-------------AEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred ---hHhhhhhcceecCCCCcHHHH-------------HHHHHHHHHHcCCCcccCccHHHhcc
Confidence 12222222 122222222222 23445899999999999999999875
No 149
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=7.1e-37 Score=308.34 Aligned_cols=259 Identities=17% Similarity=0.253 Sum_probs=188.6
Q ss_pred ccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEeecc
Q 006522 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIR 428 (642)
Q Consensus 349 ~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~ 428 (642)
.||+|+||.||++....+.. ...+++|.+.........+.|.+|+.+++.++||||++++++|......++||||++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~---~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 78 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTG---VARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCE 78 (268)
T ss_pred cCCCCcCceEEEEEEEcCCC---cceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCC
Confidence 58999999999997654421 246777877654433344789999999999999999999999999999999999999
Q ss_pred CCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCCCc
Q 006522 429 NGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSK 508 (642)
Q Consensus 429 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 508 (642)
+|+|.++++..... ...+++.....++.||+.||+|||+ .+++||||||+|||++.++.+||+|||++........
T Consensus 79 ~~~L~~~l~~~~~~-~~~~~~~~~~~~~~~i~~al~~lH~---~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~ 154 (268)
T cd05086 79 LGDLKSYLSQEQWH-RRNSQLLLLQRMACEIAAGVTHMHK---HNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDY 154 (268)
T ss_pred CCcHHHHHHhhhcc-cccccHHHHHHHHHHHHHHHHHHHH---CCeeccCCccceEEEcCCccEEecccccccccCcchh
Confidence 99999999865322 1246777888999999999999999 8999999999999999999999999999764321110
Q ss_pred ccccceeeecCCCcccccCCCcccCcccccc------CCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHH
Q 006522 509 VTKNETIVTSGTGSRISAISNVYLAPEARIY------GSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVR 581 (642)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~~l~~~~~ 581 (642)
. .......++..|+|||+... ...++.++|||||||++|||++ |..||..... .....
T Consensus 155 ~----------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~-----~~~~~ 219 (268)
T cd05086 155 I----------ETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSD-----REVLN 219 (268)
T ss_pred h----------hcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCH-----HHHHH
Confidence 0 00113356778999998532 1245789999999999999997 5667754221 12222
Q ss_pred HHHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHH
Q 006522 582 KAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 637 (642)
Q Consensus 582 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~ 637 (642)
....... ....++.+..... ..+.+++..|| .+|++||+++||++.|.
T Consensus 220 ~~~~~~~--~~~~~~~~~~~~~-----~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 220 HVIKDQQ--VKLFKPQLELPYS-----ERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred HHHhhcc--cccCCCccCCCCc-----HHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 2222211 1222232221111 23455777799 67999999999998874
No 150
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=4.5e-37 Score=308.45 Aligned_cols=250 Identities=28% Similarity=0.480 Sum_probs=199.2
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEe
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
..+.||+|+||.||+|....+ ..+++|.+...... ...++.+|+.++++++||||+++++++...+..++|||
T Consensus 10 ~~~~ig~g~~~~vy~~~~~~~------~~~~~k~~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 82 (261)
T cd05148 10 LERKLGSGYFGEVWEGLWKNR------VRVAIKILKSDDLL-KQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITE 82 (261)
T ss_pred HhhhhccCCCccEEEeEecCC------CcEEEEeccccchh-hHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEe
Confidence 356799999999999998875 78999998765332 23678999999999999999999999999999999999
Q ss_pred eccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCC
Q 006522 426 FIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPG 505 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 505 (642)
|+++|+|.++++.... ..+++..+..++.|++.||+|||+ .+++||||||+||++++++.+||+|||.+.....
T Consensus 83 ~~~~~~L~~~~~~~~~---~~~~~~~~~~~~~~i~~al~~lH~---~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~ 156 (261)
T cd05148 83 LMEKGSLLAFLRSPEG---QVLPVASLIDMACQVAEGMAYLEE---QNSIHRDLAARNILVGEDLVCKVADFGLARLIKE 156 (261)
T ss_pred ecccCCHHHHHhcCCC---CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccCcceEEEcCCceEEEccccchhhcCC
Confidence 9999999999986543 248999999999999999999999 8999999999999999999999999999976543
Q ss_pred CCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHHH
Q 006522 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAF 584 (642)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~~l~~~~~~~~ 584 (642)
.... .....++..|+|||.... ..++.++||||||+++|||++ |+.||..... ........
T Consensus 157 ~~~~------------~~~~~~~~~~~~PE~~~~-~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~-----~~~~~~~~ 218 (261)
T cd05148 157 DVYL------------SSDKKIPYKWTAPEAASH-GTFSTKSDVWSFGILLYEMFTYGQVPYPGMNN-----HEVYDQIT 218 (261)
T ss_pred cccc------------ccCCCCceEecCHHHHcc-CCCCchhhHHHHHHHHHHHHcCCCCCCCcCCH-----HHHHHHHH
Confidence 2110 002234567999998544 678999999999999999998 8999965321 12222222
Q ss_pred hc-cCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhh
Q 006522 585 RE-RRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 639 (642)
Q Consensus 585 ~~-~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l 639 (642)
.. ..+.....+ ..+.+++.+||+.||++|||+.++++.|+.+
T Consensus 219 ~~~~~~~~~~~~-------------~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 219 AGYRMPCPAKCP-------------QEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred hCCcCCCCCCCC-------------HHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 21 111111111 2356788999999999999999999999864
No 151
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=5.4e-37 Score=311.31 Aligned_cols=264 Identities=19% Similarity=0.256 Sum_probs=201.7
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEe-CCceEEEE
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYA-NDEKLLIS 424 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~-~~~~~lv~ 424 (642)
..++||+|+||.||+|...... ......|++|++.........+.+.+|+.++++++||||+++++++.. ....++++
T Consensus 10 ~~~~i~~g~~g~V~~~~~~~~~-~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~ 88 (280)
T cd05043 10 LSDLLQEGTFGRIFYGILIDEK-PGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPPFVLY 88 (280)
T ss_pred EeeeecccCCceEEEEEEecCC-CCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCCEEEE
Confidence 3578999999999999987621 111278999998765444455788999999999999999999999876 46789999
Q ss_pred eeccCCcHHHHHhcCCCC---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccc
Q 006522 425 DFIRNGSLYAALHAGPSD---SLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNR 501 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 501 (642)
||+++|+|.+++...... ....+++..+..++.|++.||+|||+ .+++||||||+||++++++.+||+|||+++
T Consensus 89 ~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~---~~i~H~di~p~nil~~~~~~~kl~d~g~~~ 165 (280)
T cd05043 89 PYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHK---RGVIHKDIAARNCVIDEELQVKITDNALSR 165 (280)
T ss_pred EcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccCHhhEEEcCCCcEEECCCCCcc
Confidence 999999999999764321 11358999999999999999999999 899999999999999999999999999998
Q ss_pred cCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHH
Q 006522 502 LLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLV 580 (642)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~~l~~~~ 580 (642)
.+........ .....++..|+|||++. +..++.++|||||||++||+++ |+.||.... . ..+.
T Consensus 166 ~~~~~~~~~~----------~~~~~~~~~y~apE~~~-~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~--~---~~~~ 229 (280)
T cd05043 166 DLFPMDYHCL----------GDNENRPVKWMALESLV-NKEYSSASDVWSFGVLLWELMTLGQTPYVEID--P---FEMA 229 (280)
T ss_pred cccCCceEEe----------CCCCCcchhccCHHHHh-cCCCCchhhHHHhHHHHHHHhcCCCCCcCcCC--H---HHHH
Confidence 6543321100 01223456799999854 4678999999999999999999 999997532 1 1222
Q ss_pred HHHHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhhhc
Q 006522 581 RKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 641 (642)
Q Consensus 581 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l~~ 641 (642)
...... ...... .. ....+.+++.+||+.||++|||+.|+++.|+.+.+
T Consensus 230 ~~~~~~-~~~~~~--~~---------~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~ 278 (280)
T cd05043 230 AYLKDG-YRLAQP--IN---------CPDELFAVMACCWALDPEERPSFSQLVQCLTDFHA 278 (280)
T ss_pred HHHHcC-CCCCCC--Cc---------CCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 222111 111110 00 01245678999999999999999999999998865
No 152
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=1.1e-37 Score=312.57 Aligned_cols=246 Identities=19% Similarity=0.316 Sum_probs=189.1
Q ss_pred ccCccCCceeEEEEecCCCC--CCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 349 VVGKSKNGIMYKVVVGRGSG--MGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 349 ~lg~g~~g~vy~~~~~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
.||+|+||.||+|.....+. ......|++|.+.... ....+.|.+|+.++++++||||+++++++...+..++||||
T Consensus 2 ~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 80 (258)
T cd05078 2 SLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH-RNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY 80 (258)
T ss_pred CCCcccchhheeeeecccccccccccchhhHHhhcchh-HHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence 58999999999998765421 1223568888876532 22336788999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCC--------eEEeccc
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELH--------PCISGFG 498 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~--------~kl~DfG 498 (642)
+++|+|.++++.... .+++..+..++.||+.||+|||+ .+|+||||||+||+++.++. +|++|||
T Consensus 81 ~~~g~L~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~lH~---~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g 153 (258)
T cd05078 81 VKFGSLDTYLKKNKN----LINISWKLEVAKQLAWALHFLED---KGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPG 153 (258)
T ss_pred CCCCcHHHHHhcCCC----CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCccceEEEecccccccCCCceEEecccc
Confidence 999999999986543 48999999999999999999999 89999999999999987765 5899999
Q ss_pred ccccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCC-CCCCCCCCCcccHH
Q 006522 499 LNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR-LPDAGPENDGKGLE 577 (642)
Q Consensus 499 la~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~-~P~~~~~~~~~~l~ 577 (642)
++...... ....++..|+|||++.....++.++|||||||++|||++|. .|+..... .
T Consensus 154 ~~~~~~~~----------------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~-----~ 212 (258)
T cd05078 154 ISITVLPK----------------EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDS-----Q 212 (258)
T ss_pred cccccCCc----------------hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccH-----H
Confidence 87654321 12346677999998665456899999999999999999985 55543211 1
Q ss_pred HHHHHHHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHH
Q 006522 578 SLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 637 (642)
Q Consensus 578 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~ 637 (642)
... ........++.... .++.+++.+||+.||++|||++|+++.|+
T Consensus 213 ~~~-~~~~~~~~~~~~~~-------------~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 213 KKL-QFYEDRHQLPAPKW-------------TELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred HHH-HHHHccccCCCCCc-------------HHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 111 11122222222222 23567888999999999999999999874
No 153
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=8e-37 Score=306.89 Aligned_cols=249 Identities=25% Similarity=0.418 Sum_probs=193.1
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
...||+|+||.||+|....+ ..||+|.+...... .++|.+|++++++++||||+++++++. .+..++||||
T Consensus 11 ~~~lg~g~~~~v~~~~~~~~------~~valK~~~~~~~~--~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~ 81 (262)
T cd05071 11 EVKLGQGCFGEVWMGTWNGT------TRVAIKTLKPGTMS--PEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEY 81 (262)
T ss_pred eeecCCCCCCcEEEEEecCC------ceEEEEecccCccC--HHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEc
Confidence 45789999999999987665 56999999764332 367899999999999999999999874 4568999999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCC
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 506 (642)
+++|+|.+++..... ..++|..+..++.|++.||+|||+ .+++||||||+||++++++.+||+|||.++.....
T Consensus 82 ~~~~~L~~~~~~~~~---~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~ 155 (262)
T cd05071 82 MSKGSLLDFLKGEMG---KYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDN 155 (262)
T ss_pred CCCCcHHHHHhhccc---cCCCHHHHHHHHHHHHHHHHHHHH---CCccccccCcccEEEcCCCcEEeccCCceeecccc
Confidence 999999999976432 248999999999999999999999 89999999999999999999999999999765432
Q ss_pred CcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHHHh
Q 006522 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFR 585 (642)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~~l~~~~~~~~~ 585 (642)
... ......++..|+|||+.. +..++.++|||||||++|||+| |+.||..... .........
T Consensus 156 ~~~-----------~~~~~~~~~~y~~PE~~~-~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~-----~~~~~~~~~ 218 (262)
T cd05071 156 EYT-----------ARQGAKFPIKWTAPEAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-----REVLDQVER 218 (262)
T ss_pred ccc-----------cccCCcccceecCHhHhc-cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCh-----HHHHHHHhc
Confidence 110 001223566799999844 4678999999999999999999 8888864321 111222211
Q ss_pred ccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhh
Q 006522 586 ERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 639 (642)
Q Consensus 586 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l 639 (642)
.. ... ..+ .....+.+++.+|++.||++||++.++++.|+..
T Consensus 219 ~~-~~~--~~~---------~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 219 GY-RMP--CPP---------ECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred CC-CCC--Ccc---------ccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 11 100 111 1123456799999999999999999999999864
No 154
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=9e-37 Score=311.03 Aligned_cols=261 Identities=21% Similarity=0.337 Sum_probs=198.3
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
...||+|+||.||+|...+.........||+|.+...........+.+|+.++++++||||+++++++...+..++||||
T Consensus 11 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 90 (288)
T cd05061 11 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMEL 90 (288)
T ss_pred eeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEeC
Confidence 46899999999999986542222223689999987654333345788999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcCCCC-----CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccc
Q 006522 427 IRNGSLYAALHAGPSD-----SLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNR 501 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~-----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 501 (642)
+++|+|.++++..... .....++..+..++.|++.||+|||+ ++|+||||||+||++++++.+|++|||+++
T Consensus 91 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dikp~nili~~~~~~~L~Dfg~~~ 167 (288)
T cd05061 91 MAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTR 167 (288)
T ss_pred CCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCcCCCCChheEEEcCCCcEEECcCCccc
Confidence 9999999999753321 12346788899999999999999999 899999999999999999999999999988
Q ss_pred cCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHH
Q 006522 502 LLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLV 580 (642)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~~l~~~~ 580 (642)
......... . .....++..|+|||.... ..++.++|||||||++|||++ |+.||..... ....
T Consensus 168 ~~~~~~~~~-------~---~~~~~~~~~y~~pE~~~~-~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~-----~~~~ 231 (288)
T cd05061 168 DIYETDYYR-------K---GGKGLLPVRWMAPESLKD-GVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN-----EQVL 231 (288)
T ss_pred ccccccccc-------c---cCCCcccccccCHHHhcc-CCCChHhHHHHHHHHHHHHHhCCCCCCCCCCH-----HHHH
Confidence 654322100 0 012234567999998544 678999999999999999999 7888864322 2222
Q ss_pred HHHHhccC-CCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhh
Q 006522 581 RKAFRERR-PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 639 (642)
Q Consensus 581 ~~~~~~~~-~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l 639 (642)
........ ...... ...+.+++.+||+.||++|||+.|+++.|++.
T Consensus 232 ~~~~~~~~~~~~~~~-------------~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~ 278 (288)
T cd05061 232 KFVMDGGYLDQPDNC-------------PERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 278 (288)
T ss_pred HHHHcCCCCCCCCCC-------------CHHHHHHHHHHcCCChhHCcCHHHHHHHHHhh
Confidence 22222111 111111 13466788999999999999999999998874
No 155
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=4.4e-37 Score=316.56 Aligned_cols=261 Identities=16% Similarity=0.238 Sum_probs=192.9
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
.+.||+|+||.||+++....+ ..||+|.++..........+.+|++++++++||||+++++++..++..++||||
T Consensus 11 ~~~lg~G~~g~Vy~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 11 LEKLGEGTYATVFKGRSKLTE-----NLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred EEEecccCCEEEEEEEecCCC-----CeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence 467999999999999987664 789999987653333335688999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCC
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 506 (642)
+++ +|.+++..... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.....
T Consensus 86 ~~~-~l~~~~~~~~~----~~~~~~~~~~~~qi~~aL~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 157 (309)
T cd07872 86 LDK-DLKQYMDDCGN----IMSMHNVKIFLYQILRGLAYCHR---RKVLHRDLKPQNLLINERGELKLADFGLARAKSVP 157 (309)
T ss_pred CCC-CHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECccccceecCCC
Confidence 975 89888875432 38899999999999999999999 89999999999999999999999999998754322
Q ss_pred CcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHhc
Q 006522 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE 586 (642)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~~ 586 (642)
.. ......+|..|+|||++.....++.++||||+||++|||+||+.||...... ..+.. +......
T Consensus 158 ~~------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~-~~~~~-~~~~~~~ 223 (309)
T cd07872 158 TK------------TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVE-DELHL-IFRLLGT 223 (309)
T ss_pred cc------------ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHH-HHHHhCC
Confidence 10 0112356788999998655567899999999999999999999999754321 11111 1111110
Q ss_pred cCC--CccccC------hhhhhc----h--hHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 587 RRP--LSEVID------PALVKE----I--HAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 587 ~~~--~~~~~d------~~l~~~----~--~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
... .....+ ...... . .......++.+++.+|++.||++|||+.|+++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 224 PTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred CCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 000 000000 000000 0 00001234568999999999999999999986
No 156
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.1e-37 Score=330.33 Aligned_cols=258 Identities=18% Similarity=0.214 Sum_probs=190.3
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
...||+|+||.||++.....+ +.||||.... ..+.+|+++|++++|||||++++++...+..++||||
T Consensus 174 ~~~Lg~G~~G~Vy~a~~~~~~-----~~vavK~~~~-------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~ 241 (461)
T PHA03211 174 HRALTPGSEGCVFESSHPDYP-----QRVVVKAGWY-------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPK 241 (461)
T ss_pred EEEEccCCCeEEEEEEECCCC-----CEEEEecccc-------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 467999999999999988765 7899996432 3467899999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCC
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 506 (642)
+. ++|.+++..... .++|.++..|+.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++.....
T Consensus 242 ~~-~~L~~~l~~~~~----~l~~~~~~~i~~qi~~aL~yLH~---~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~ 313 (461)
T PHA03211 242 YR-SDLYTYLGARLR----PLGLAQVTAVARQLLSAIDYIHG---EGIIHRDIKTENVLVNGPEDICLGDFGAACFARGS 313 (461)
T ss_pred cC-CCHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHH---CCEEECcCCHHHEEECCCCCEEEcccCCceecccc
Confidence 95 699998875432 49999999999999999999999 89999999999999999999999999999865432
Q ss_pred CcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCC---cc---cHHHHH
Q 006522 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEND---GK---GLESLV 580 (642)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~---~~---~l~~~~ 580 (642)
... .......||..|+|||++. +..++.++|||||||++|||++|..|+...... .. .+...+
T Consensus 314 ~~~----------~~~~~~~GT~~Y~APE~~~-~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i 382 (461)
T PHA03211 314 WST----------PFHYGIAGTVDTNAPEVLA-GDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRII 382 (461)
T ss_pred ccc----------ccccccCCCcCCcCHHHHc-CCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHH
Confidence 110 0011346899999999954 467899999999999999999988775432211 11 122222
Q ss_pred HHHHhccCCCccccChhhhhchhHH------------------HHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 006522 581 RKAFRERRPLSEVIDPALVKEIHAK------------------RQVLATFHIALNCTELDPEFRPRMRTVSES 635 (642)
Q Consensus 581 ~~~~~~~~~~~~~~d~~l~~~~~~~------------------~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~ 635 (642)
+........+.......+....... .....+.+++.+||+.||++|||+.|+++.
T Consensus 383 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 383 RQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred HhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 2111100011111111111100000 001246679999999999999999999863
No 157
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=8.5e-37 Score=306.35 Aligned_cols=247 Identities=28% Similarity=0.480 Sum_probs=193.0
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
...||+|++|.||++....+ ..+|+|.+...... .++|.+|+.++++++|+||+++++++. .+..++||||
T Consensus 11 ~~~ig~g~~~~v~~~~~~~~------~~~~~k~~~~~~~~--~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~ 81 (260)
T cd05070 11 IKKLGNGQFGEVWMGTWNGN------TKVAVKTLKPGTMS--PESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEY 81 (260)
T ss_pred hheeccccCceEEEEEecCC------ceeEEEEecCCCCC--HHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEe
Confidence 46799999999999987765 67999998764332 267999999999999999999999875 4568999999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCC
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 506 (642)
+++++|.++++.... ..+++..+..++.|++.||+|||+ .+++||||||+||++++++.+||+|||++......
T Consensus 82 ~~~~~L~~~~~~~~~---~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~ 155 (260)
T cd05070 82 MSKGSLLDFLKDGEG---RALKLPNLVDMAAQVAAGMAYIER---MNYIHRDLRSANILVGDGLVCKIADFGLARLIEDN 155 (260)
T ss_pred cCCCcHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCccceEEEeCCceEEeCCceeeeeccCc
Confidence 999999999976432 248999999999999999999999 89999999999999999999999999999765432
Q ss_pred CcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHHHh
Q 006522 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFR 585 (642)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~~l~~~~~~~~~ 585 (642)
... ......++..|+|||+.. +..++.++||||||+++|||++ |+.||.+... .........
T Consensus 156 ~~~-----------~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~-----~~~~~~~~~ 218 (260)
T cd05070 156 EYT-----------ARQGAKFPIKWTAPEAAL-YGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN-----REVLEQVER 218 (260)
T ss_pred ccc-----------cccCCCCCccccChHHHh-cCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCH-----HHHHHHHHc
Confidence 110 001123455799999854 4678999999999999999999 8999965321 122222221
Q ss_pred c-cCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHh
Q 006522 586 E-RRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 638 (642)
Q Consensus 586 ~-~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 638 (642)
. ..+..... ...+.+++.+|++.+|++|||++++.+.|+.
T Consensus 219 ~~~~~~~~~~-------------~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 219 GYRMPCPQDC-------------PISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred CCCCCCCCcC-------------CHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 1 11111111 1245678999999999999999999999875
No 158
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=7.8e-37 Score=314.44 Aligned_cols=264 Identities=23% Similarity=0.339 Sum_probs=199.9
Q ss_pred cccccCccCCceeEEEEecCCCCC--CCCeEEEEEEecCCCccccHHHHHHHHHHHhcc-cCCCeeeEEEEEEeCCceEE
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGM--GAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLL 422 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~l 422 (642)
..+.||+|+||.||++........ .....+|+|.++.........++.+|+++++++ +||||+++++++...+..++
T Consensus 22 i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~l 101 (307)
T cd05098 22 LGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYV 101 (307)
T ss_pred EeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEE
Confidence 457899999999999986442211 122579999998643333346788999999999 89999999999999999999
Q ss_pred EEeeccCCcHHHHHhcCCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCC
Q 006522 423 ISDFIRNGSLYAALHAGPSD-----------SLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELH 491 (642)
Q Consensus 423 v~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~ 491 (642)
||||+++|+|.+++...... ....++|.++++++.|++.||+|||+ .+++||||||+||+++.++.
T Consensus 102 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~---~gi~H~dlkp~Nill~~~~~ 178 (307)
T cd05098 102 IVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNV 178 (307)
T ss_pred EEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH---CCcccccccHHheEEcCCCc
Confidence 99999999999999765321 11358999999999999999999998 89999999999999999999
Q ss_pred eEEecccccccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCC
Q 006522 492 PCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPE 570 (642)
Q Consensus 492 ~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~ 570 (642)
+||+|||+++......... ......++..|+|||++. +..++.++|||||||++|||++ |..||...
T Consensus 179 ~kL~dfg~a~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~-~~~~~~~~DvwslG~~l~el~~~g~~p~~~~- 246 (307)
T cd05098 179 MKIADFGLARDIHHIDYYK----------KTTNGRLPVKWMAPEALF-DRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV- 246 (307)
T ss_pred EEECCCcccccccccchhh----------ccccCCCccceeChHHhc-cCCCCcHHHHHHHHHHHHHHHcCCCCCCCcC-
Confidence 9999999987653221100 000122345799999854 4678999999999999999998 88888642
Q ss_pred CCcccHHHHHHHHHhccC-CCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhhhc
Q 006522 571 NDGKGLESLVRKAFRERR-PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 641 (642)
Q Consensus 571 ~~~~~l~~~~~~~~~~~~-~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l~~ 641 (642)
.............. .....+ ..++.+++.+||+.+|++||++.|+++.|+++..
T Consensus 247 ----~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~ 301 (307)
T cd05098 247 ----PVEELFKLLKEGHRMDKPSNC-------------TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILA 301 (307)
T ss_pred ----CHHHHHHHHHcCCCCCCCCcC-------------CHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHH
Confidence 12222222222111 111111 1245568889999999999999999999998753
No 159
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-38 Score=324.50 Aligned_cols=257 Identities=23% Similarity=0.343 Sum_probs=205.9
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEe
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
..++||+|.||+|++|.+...+ +....||||.++.........+|++|+.+|.+|+|||+|+|||...+ ....||||
T Consensus 114 l~e~LG~GsFgvV~rg~Wt~ps--gk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~E 190 (1039)
T KOG0199|consen 114 LYELLGEGSFGVVKRGTWTQPS--GKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFE 190 (1039)
T ss_pred HHHHhcCcceeeEeeccccCCC--CcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhh
Confidence 3578999999999999988743 44578999999876544456899999999999999999999999987 67889999
Q ss_pred eccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCC
Q 006522 426 FIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPG 505 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 505 (642)
.++.|+|.+.|++... ..|.......++.|||.||.||.+ +++|||||..+|+|+.....+||+||||.+-+..
T Consensus 191 LaplGSLldrLrka~~---~~llv~~Lcdya~QiA~aM~YLes---krlvHRDLAARNlllasprtVKI~DFGLmRaLg~ 264 (1039)
T KOG0199|consen 191 LAPLGSLLDRLRKAKK---AILLVSRLCDYAMQIAKAMQYLES---KRLVHRDLAARNLLLASPRTVKICDFGLMRALGE 264 (1039)
T ss_pred hcccchHHHHHhhccc---cceeHHHHHHHHHHHHHHHHHHhh---hhhhhhhhhhhhheecccceeeeecccceeccCC
Confidence 9999999999998332 358888889999999999999999 8999999999999999999999999999999887
Q ss_pred CCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHHH
Q 006522 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAF 584 (642)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~~l~~~~~~~~ 584 (642)
...++.... .......|.|||.+.. ..++.++|||+|||++|||+| |+.||.+.. + .++++.+-
T Consensus 265 ned~Yvm~p---------~rkvPfAWCaPEsLrh-~kFShaSDvWmyGVTiWEMFtyGEePW~G~~--g---~qIL~~iD 329 (1039)
T KOG0199|consen 265 NEDMYVMAP---------QRKVPFAWCAPESLRH-RKFSHASDVWMYGVTIWEMFTYGEEPWVGCR--G---IQILKNID 329 (1039)
T ss_pred CCcceEecC---------CCcCcccccCHhHhcc-ccccccchhhhhhhhHHhhhccCCCCCCCCC--H---HHHHHhcc
Confidence 655442111 2233456999999554 899999999999999999999 899997632 2 22222221
Q ss_pred hccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHh
Q 006522 585 RERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 638 (642)
Q Consensus 585 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 638 (642)
++..+ ...+.+.+.+++++..||..+|++|||+..+.+.+-.
T Consensus 330 -~~erL-----------pRPk~csedIY~imk~cWah~paDRptFsair~~~~l 371 (1039)
T KOG0199|consen 330 -AGERL-----------PRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLVL 371 (1039)
T ss_pred -ccccC-----------CCCCCChHHHHHHHHHhccCCccccccHHHHHHhHHH
Confidence 11111 1112355677889999999999999999999865533
No 160
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=1.3e-37 Score=328.29 Aligned_cols=259 Identities=19% Similarity=0.276 Sum_probs=192.0
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC--ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 424 (642)
.+.||+|+||.||++.....+ +.||||++.... .....+.+.+|+.++..++||||+++++++...+..++||
T Consensus 6 ~~~lG~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 6 IKVIGRGAFGEVRLVQKKDTG-----HIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred EEEEEecCCEEEEEEEECCCC-----CEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 467999999999999987765 789999997532 1223366889999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCC
Q 006522 425 DFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLP 504 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 504 (642)
||+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++.+.
T Consensus 81 E~~~~g~L~~~l~~~~-----~l~~~~~~~~~~qi~~aL~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 152 (364)
T cd05599 81 EYLPGGDMMTLLMKKD-----TFTEEETRFYIAETILAIDSIHK---LGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLK 152 (364)
T ss_pred CCCCCcHHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEeecccceecc
Confidence 9999999999997643 38999999999999999999999 899999999999999999999999999997653
Q ss_pred CCCcccccceee--------------------------ecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHH
Q 006522 505 GTSKVTKNETIV--------------------------TSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLE 558 (642)
Q Consensus 505 ~~~~~~~~~~~~--------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~e 558 (642)
............ .........+||+.|+|||++. +..++.++|||||||++||
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwSlG~il~e 231 (364)
T cd05599 153 KSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFL-QTGYNKECDWWSLGVIMYE 231 (364)
T ss_pred ccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHc-CCCCCCeeeeecchhHHHH
Confidence 321100000000 0000011346999999999854 4778999999999999999
Q ss_pred HHhCCCCCCCCCCCcccHHHHHHHHHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCC---HHHHHH
Q 006522 559 ILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPR---MRTVSE 634 (642)
Q Consensus 559 l~tG~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs---~~ev~~ 634 (642)
|++|+.||..... .............+...-+..+ ...+.+++.+|+. +|.+|++ +.|+++
T Consensus 232 l~~G~~Pf~~~~~-----~~~~~~i~~~~~~~~~~~~~~~---------s~~~~~li~~ll~-~p~~R~~~~~~~~ll~ 295 (364)
T cd05599 232 MLVGYPPFCSDNP-----QETYRKIINWKETLQFPDEVPL---------SPEAKDLIKRLCC-EAERRLGNNGVNEIKS 295 (364)
T ss_pred hhcCCCCCCCCCH-----HHHHHHHHcCCCccCCCCCCCC---------CHHHHHHHHHHcc-CHhhcCCCCCHHHHhc
Confidence 9999999975321 2222222221111100000000 1133456677886 8999998 887765
No 161
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=1.7e-37 Score=326.62 Aligned_cols=248 Identities=18% Similarity=0.234 Sum_probs=188.6
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC--ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 424 (642)
...||+|+||.||++....++ +.+|+|.+.+.. .....+.+.+|+.+++.++||||+++++++...+..++||
T Consensus 48 ~~~lG~G~fg~Vy~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~ 122 (370)
T cd05621 48 VKVIGRGAFGEVQLVRHKSSQ-----KVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVM 122 (370)
T ss_pred EEEEEecCCeEEEEEEECCCC-----CEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 467999999999999988765 899999986531 1222356889999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCC
Q 006522 425 DFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLP 504 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 504 (642)
||+++|+|.+++... .+++..+..++.||+.||+|||+ .+|+||||||+|||+++++.+||+|||+++...
T Consensus 123 Ey~~gg~L~~~l~~~------~~~~~~~~~~~~qil~aL~~LH~---~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~ 193 (370)
T cd05621 123 EYMPGGDLVNLMSNY------DVPEKWAKFYTAEVVLALDAIHS---MGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMD 193 (370)
T ss_pred cCCCCCcHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHEEECCCCCEEEEecccceecc
Confidence 999999999999653 27888999999999999999999 899999999999999999999999999998654
Q ss_pred CCCcccccceeeecCCCcccccCCCcccCccccccC---CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHH
Q 006522 505 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYG---SKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVR 581 (642)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~ 581 (642)
..... ......||+.|+|||++... ..++.++||||+||++|||+||+.||.... ......
T Consensus 194 ~~~~~-----------~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~-----~~~~~~ 257 (370)
T cd05621 194 ETGMV-----------RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADS-----LVGTYS 257 (370)
T ss_pred cCCce-----------ecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCC-----HHHHHH
Confidence 32110 11245689999999985432 237889999999999999999999997532 222233
Q ss_pred HHHhccCC--CccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCC--CCCHHHHHHH
Q 006522 582 KAFRERRP--LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEF--RPRMRTVSES 635 (642)
Q Consensus 582 ~~~~~~~~--~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~--RPs~~ev~~~ 635 (642)
........ +++.. .+ ...+.+++..|+..++.+ ||++.|+++.
T Consensus 258 ~i~~~~~~~~~p~~~--~~---------s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 258 KIMDHKNSLNFPEDV--EI---------SKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred HHHhCCcccCCCCcc--cC---------CHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 33222111 11110 00 112334666778755543 8899998763
No 162
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=2.7e-37 Score=311.14 Aligned_cols=258 Identities=19% Similarity=0.295 Sum_probs=199.9
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC--ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 424 (642)
...||+|++|.||++....++ ..++||.+.... ......+|.+|+.++++++||||+++++++..++..++||
T Consensus 7 ~~~ig~g~~g~v~~~~~~~~~-----~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 7 EKKIGRGQFSEVYRATCLLDG-----VPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred hhhhcccCCeEEEEEeecCCC-----ceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 467999999999999986554 789999886532 2223367899999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCC
Q 006522 425 DFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLP 504 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 504 (642)
||+++++|.+++...... ...++|..+..++.||++||+|||+ .+++|+||||+||+++.++.++++|||++....
T Consensus 82 e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~ 157 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQ-KRLIPEKTVWKYFVQLCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFS 157 (267)
T ss_pred EecCCCCHHHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEECcchhhhccc
Confidence 999999999998743221 1358999999999999999999999 899999999999999999999999999987654
Q ss_pred CCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHH
Q 006522 505 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAF 584 (642)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~ 584 (642)
.... ......|+..|+|||+.. +..++.++||||||+++|||++|..||.....+ .....+...
T Consensus 158 ~~~~------------~~~~~~~~~~~~ape~~~-~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~~~~~~~~ 221 (267)
T cd08229 158 SKTT------------AAHSLVGTPYYMSPERIH-ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN---LYSLCKKIE 221 (267)
T ss_pred cCCc------------ccccccCCcCccCHHHhc-CCCccchhhHHHHHHHHHHHHhCCCCcccccch---HHHHhhhhh
Confidence 3211 011235778899999854 467889999999999999999999999653221 222222221
Q ss_pred hccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhhh
Q 006522 585 RERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 640 (642)
Q Consensus 585 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l~ 640 (642)
....+ .. .+ ......+.+++.+||+.||++||||.+|++.++++.
T Consensus 222 ~~~~~--~~-~~--------~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 222 QCDYP--PL-PS--------DHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred cCCCC--CC-Cc--------ccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 11111 00 00 011224556888999999999999999999998874
No 163
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=2.6e-37 Score=325.36 Aligned_cols=208 Identities=22% Similarity=0.297 Sum_probs=170.0
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC--ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 424 (642)
.+.||+|+||.||++.....+ +.||+|++.+.. .......+.+|+.++.+++||||+++++++.+.+..++||
T Consensus 6 ~~~LG~G~~g~V~~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 6 LKVIGRGAFGEVRLVQKKDTG-----HVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred eEEEEeCCCEEEEEEEECCCC-----CEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 467999999999999987664 799999997532 1223367889999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCC
Q 006522 425 DFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLP 504 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 504 (642)
||+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++.+.
T Consensus 81 E~~~gg~L~~~l~~~~-----~l~~~~~~~~~~qi~~aL~~lH~---~givHrDlKp~NILi~~~~~vkL~DFGla~~~~ 152 (363)
T cd05628 81 EFLPGGDMMTLLMKKD-----TLTEEETQFYIAETVLAIDSIHQ---LGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLK 152 (363)
T ss_pred cCCCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHh---CCeEecCCCHHHeEECCCCCEEEeeccCccccc
Confidence 9999999999997643 48999999999999999999999 899999999999999999999999999998654
Q ss_pred CCCcccccc----------ee-------------eecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh
Q 006522 505 GTSKVTKNE----------TI-------------VTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT 561 (642)
Q Consensus 505 ~~~~~~~~~----------~~-------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t 561 (642)
......... .. ..........+||+.|+|||++. +..++.++|||||||++|||++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~-~~~~~~~~DvwSlGvil~ell~ 231 (363)
T cd05628 153 KAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFM-QTGYNKLCDWWSLGVIMYEMLI 231 (363)
T ss_pred ccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHc-CCCCCCchhhhhhHHHHHHHHh
Confidence 321100000 00 00000012357999999999854 4778999999999999999999
Q ss_pred CCCCCCC
Q 006522 562 GRLPDAG 568 (642)
Q Consensus 562 G~~P~~~ 568 (642)
|+.||.+
T Consensus 232 G~~Pf~~ 238 (363)
T cd05628 232 GYPPFCS 238 (363)
T ss_pred CCCCCCC
Confidence 9999975
No 164
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.4e-38 Score=326.09 Aligned_cols=244 Identities=21% Similarity=0.345 Sum_probs=199.5
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEe---cCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCc--e
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRL---TEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDE--K 420 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~---~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~--~ 420 (642)
+..+||+|+|-+||||.+...+ ..||=-.+ +........++|..|+++|+.|+|||||+++.++.+... .
T Consensus 44 ~~evLGrGafKtVYka~De~~g-----iEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~i 118 (632)
T KOG0584|consen 44 FDEVLGRGAFKTVYKAFDEEEG-----IEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTI 118 (632)
T ss_pred hhhhcccccceeeeeccccccc-----hhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCcee
Confidence 4568999999999999997664 44542222 122333445889999999999999999999999998665 7
Q ss_pred EEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCC-CCCeEEecccc
Q 006522 421 LLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDD-ELHPCISGFGL 499 (642)
Q Consensus 421 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~-~~~~kl~DfGl 499 (642)
-+|.|.|..|+|+.|+++++. ++.+....|++||++||.|||++. ++|||||||.+||+++. .|.+||+|+||
T Consensus 119 n~iTEL~TSGtLr~Y~kk~~~-----vn~kaik~W~RQILkGL~yLHs~~-PPIIHRDLKCDNIFinG~~G~VKIGDLGL 192 (632)
T KOG0584|consen 119 NFITELFTSGTLREYRKKHRR-----VNIKAIKSWCRQILKGLVYLHSQD-PPIIHRDLKCDNIFVNGNLGEVKIGDLGL 192 (632)
T ss_pred eeeeecccCCcHHHHHHHhcc-----CCHHHHHHHHHHHHHHhhhhhcCC-CCccccccccceEEEcCCcCceeecchhH
Confidence 799999999999999998765 777899999999999999999977 69999999999999975 59999999999
Q ss_pred cccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHH
Q 006522 500 NRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESL 579 (642)
Q Consensus 500 a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~ 579 (642)
|....... ...+.|||.|||||++. ..|++.+||||||++++||+|+..||.. ..+-.++
T Consensus 193 Atl~r~s~--------------aksvIGTPEFMAPEmYE--E~YnE~VDVYaFGMCmLEMvT~eYPYsE----C~n~AQI 252 (632)
T KOG0584|consen 193 ATLLRKSH--------------AKSVIGTPEFMAPEMYE--ENYNELVDVYAFGMCMLEMVTSEYPYSE----CTNPAQI 252 (632)
T ss_pred HHHhhccc--------------cceeccCccccChHHHh--hhcchhhhhhhhhHHHHHHHhccCChhh----hCCHHHH
Confidence 98875431 12468999999999743 6899999999999999999999999964 4556777
Q ss_pred HHHHHhccCC--CccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 580 VRKAFRERRP--LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 580 ~~~~~~~~~~--~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
.++...+..| +..+-||++.. ++.+|+.. ..+|||+.|++.
T Consensus 253 YKKV~SGiKP~sl~kV~dPevr~-------------fIekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 253 YKKVTSGIKPAALSKVKDPEVRE-------------FIEKCLAT-KSERLSAKELLK 295 (632)
T ss_pred HHHHHcCCCHHHhhccCCHHHHH-------------HHHHHhcC-chhccCHHHHhh
Confidence 7777766554 34444565544 66679999 999999999985
No 165
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=4.9e-37 Score=313.31 Aligned_cols=261 Identities=20% Similarity=0.281 Sum_probs=186.6
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCc-cccHHHHHHHHHHHhcc---cCCCeeeEEEEEEe-----C
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA-TWRFKDFESEVEAIARV---QHPNIVRLKAFYYA-----N 417 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l---~H~nIv~l~~~~~~-----~ 417 (642)
...||+|+||.||+|.....++ +.||+|.++.... ......+.+|+.+++++ +||||++++++|.. .
T Consensus 6 ~~~lg~G~~g~Vy~~~~~~~~~----~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~ 81 (290)
T cd07862 6 VAEIGEGAYGKVFKARDLKNGG----RFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE 81 (290)
T ss_pred eeEeccCCCeEEEEEEEcCCCC----eEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence 4579999999999998743211 7899999875422 22225667788887766 69999999999863 3
Q ss_pred CceEEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecc
Q 006522 418 DEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGF 497 (642)
Q Consensus 418 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~Df 497 (642)
...++||||+. ++|.+++..... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+||
T Consensus 82 ~~~~lv~e~~~-~~l~~~~~~~~~---~~~~~~~~~~i~~qi~~aL~~lH~---~~iiH~dlkp~Nil~~~~~~~kl~Df 154 (290)
T cd07862 82 TKLTLVFEHVD-QDLTTYLDKVPE---PGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADF 154 (290)
T ss_pred CcEEEEEccCC-CCHHHHHHhCCC---CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEEcCCCCEEEccc
Confidence 46899999996 599999976433 248999999999999999999999 89999999999999999999999999
Q ss_pred cccccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHH
Q 006522 498 GLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLE 577 (642)
Q Consensus 498 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~ 577 (642)
|+++...... ......||+.|+|||.+. +..++.++|||||||++|||++|+.||.+.... ..+.
T Consensus 155 g~~~~~~~~~-------------~~~~~~~~~~y~aPE~~~-~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~-~~~~ 219 (290)
T cd07862 155 GLARIYSFQM-------------ALTSVVVTLWYRAPEVLL-QSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV-DQLG 219 (290)
T ss_pred cceEeccCCc-------------ccccccccccccChHHHh-CCCCCCccchHHHHHHHHHHHcCCCCcCCCCHH-HHHH
Confidence 9987653221 111346788999999854 467899999999999999999999999753321 1111
Q ss_pred HHHHHHHhccC--CCc-------cccChhhhhchhH--HHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 578 SLVRKAFRERR--PLS-------EVIDPALVKEIHA--KRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 578 ~~~~~~~~~~~--~~~-------~~~d~~l~~~~~~--~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
..+... .... ... ..+.+.-...... ......+.+++.+|++.||++|||+.|+++
T Consensus 220 ~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 220 KILDVI-GLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred HHHHHh-CCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 211111 0000 000 0000000000000 001134567999999999999999999975
No 166
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=6.6e-38 Score=325.80 Aligned_cols=250 Identities=19% Similarity=0.248 Sum_probs=193.3
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCc--cccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA--TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 424 (642)
...||+|+||.||++.....+ +.||+|+++.... ....+.+.+|+.+++.++||||+++++++...+..++||
T Consensus 6 ~~~lg~G~~g~Vy~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 6 KSLVGRGHFGEVQVVREKATG-----DIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred EEEEEeccCEEEEEEEECCCC-----CEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 467999999999999987765 7999999976421 223467889999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCC
Q 006522 425 DFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLP 504 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 504 (642)
||+++|+|.+++..... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++...
T Consensus 81 e~~~~~~L~~~l~~~~~----~l~~~~~~~~~~qi~~aL~~lH~---~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~ 153 (330)
T cd05601 81 EYQPGGDLLSLLNRYED----QFDEDMAQFYLAELVLAIHSVHQ---MGYVHRDIKPENVLIDRTGHIKLADFGSAARLT 153 (330)
T ss_pred CCCCCCCHHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHH---CCeEcccCchHheEECCCCCEEeccCCCCeECC
Confidence 99999999999976532 48999999999999999999999 899999999999999999999999999998654
Q ss_pred CCCcccccceeeecCCCcccccCCCcccCcccccc-----CCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHH
Q 006522 505 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIY-----GSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESL 579 (642)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~ 579 (642)
..... ......||+.|+|||++.. ...++.++|||||||++|||+||+.||..... ...
T Consensus 154 ~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~-----~~~ 217 (330)
T cd05601 154 ANKMV-----------NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTS-----AKT 217 (330)
T ss_pred CCCce-----------eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCH-----HHH
Confidence 32110 0113467889999998542 35678999999999999999999999975322 222
Q ss_pred HHHHHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 580 VRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 580 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
............-.-++.+ ...+.+++..|++ +|++||++.++++
T Consensus 218 ~~~i~~~~~~~~~~~~~~~---------~~~~~~li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 218 YNNIMNFQRFLKFPEDPKV---------SSDFLDLIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred HHHHHcCCCccCCCCCCCC---------CHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence 2222221111000000111 1234557777997 9999999999874
No 167
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=7.7e-39 Score=293.74 Aligned_cols=270 Identities=20% Similarity=0.258 Sum_probs=202.7
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCC-----ce
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYAND-----EK 420 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~-----~~ 420 (642)
..+.+|+|||..||.+....+. +.+|+|++.-.. .+..+..++|++..++++||||++++++...+. +.
T Consensus 25 i~~~LgeGGfsfv~LV~~~s~~-----~~YAlKkI~c~~-~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~ 98 (302)
T KOG2345|consen 25 IQRLLGEGGFSFVDLVKGLSTG-----HLYALKKILCHS-QEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEA 98 (302)
T ss_pred EeeeecCCCceeeeeecccCcc-----cchhhheeeccc-hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeE
Confidence 3568999999999999855544 789999997654 334588999999999999999999998875433 58
Q ss_pred EEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEeccccc
Q 006522 421 LLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLN 500 (642)
Q Consensus 421 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla 500 (642)
|++++|...|+|.+.+......+ ..+++.+.+.|+.+|++||.+||+.. ++++||||||.|||+.+++.+++.|||.+
T Consensus 99 yll~Pyy~~Gsl~d~i~~~k~kg-~~~sE~~iL~if~gic~gL~~lH~~~-~~yAH~DiKP~NILls~~~~~vl~D~GS~ 176 (302)
T KOG2345|consen 99 YLLLPYYKRGSLLDEIERLKIKG-NFVSEAQILWIFLGICRGLEALHEKE-PPYAHRDIKPANILLSDSGLPVLMDLGSA 176 (302)
T ss_pred EEEeehhccccHHHHHHHHhhcC-CccCHHHHHHHHHHHHHHHHHHhccC-CcccccCCCcceeEecCCCceEEEeccCc
Confidence 99999999999999997654432 35999999999999999999999955 36999999999999999999999999998
Q ss_pred ccCCCCCcccccceeeecCCCcccccCCCcccCcccccc--CCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHH
Q 006522 501 RLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIY--GSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLES 578 (642)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~ 578 (642)
....-............. -..-..|..|+|||.+.- +...++++|||||||+||+|+.|..||+.....+..+.-
T Consensus 177 ~~a~i~i~~~~~a~~lQe---~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaL 253 (302)
T KOG2345|consen 177 TQAPIQIEGSRQALRLQE---WAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLAL 253 (302)
T ss_pred cccceEeechHHHHHHHH---HHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEE
Confidence 765432211111100000 012345777999998543 345789999999999999999999999865444433322
Q ss_pred HHHHHHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhhh
Q 006522 579 LVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 640 (642)
Q Consensus 579 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l~ 640 (642)
.+.. +.+. ..........+.+++.+|++.||.+||+..|++..++.+.
T Consensus 254 Av~n-------------~q~s-~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 254 AVQN-------------AQIS-IPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred eeec-------------cccc-cCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 1111 1110 0001112345677899999999999999999999998763
No 168
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=9.4e-38 Score=330.59 Aligned_cols=255 Identities=19% Similarity=0.250 Sum_probs=189.4
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC--ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 424 (642)
.+.||+|+||.||++.....+ +.||||.+.+.. .....+.+.+|++++++++|||||++++++.+.+..|+||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 6 VKVIGKGAFGEVRLVQKKDTG-----KIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred eEEEeecCCEEEEEEEECCCC-----CEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 467999999999999987765 899999986532 2223467889999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCC
Q 006522 425 DFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLP 504 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 504 (642)
||+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 81 E~~~gg~L~~~l~~~~-----~~~~~~~~~~~~ql~~aL~~LH~---~givHrDlkp~NIll~~~~~~kl~DfGla~~~~ 152 (377)
T cd05629 81 EFLPGGDLMTMLIKYD-----TFSEDVTRFYMAECVLAIEAVHK---LGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFH 152 (377)
T ss_pred eCCCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEECCCCCEEEeecccccccc
Confidence 9999999999997543 38899999999999999999999 899999999999999999999999999997432
Q ss_pred CCCcccc-----cceeee------------------------------cCCCcccccCCCcccCccccccCCCCCcccch
Q 006522 505 GTSKVTK-----NETIVT------------------------------SGTGSRISAISNVYLAPEARIYGSKFTQKCDV 549 (642)
Q Consensus 505 ~~~~~~~-----~~~~~~------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV 549 (642)
....... ...... ........+||+.|+|||++. +..++.++||
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Di 231 (377)
T cd05629 153 KQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFL-QQGYGQECDW 231 (377)
T ss_pred cccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHc-cCCCCCceee
Confidence 2110000 000000 000011246999999999854 4778999999
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHhcc--CCCcc--ccChhhhhchhHHHHHHHHHHHHHhcCCCCCCC
Q 006522 550 YSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRER--RPLSE--VIDPALVKEIHAKRQVLATFHIALNCTELDPEF 625 (642)
Q Consensus 550 ~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~~~--~~~~~--~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~ 625 (642)
|||||++|||+||+.||..... ........... ..+++ .++ ..+.+++.+|+. +|.+
T Consensus 232 wSlGvil~elltG~~Pf~~~~~-----~~~~~~i~~~~~~~~~p~~~~~s-------------~~~~dli~~lL~-~~~~ 292 (377)
T cd05629 232 WSLGAIMFECLIGWPPFCSENS-----HETYRKIINWRETLYFPDDIHLS-------------VEAEDLIRRLIT-NAEN 292 (377)
T ss_pred EecchhhhhhhcCCCCCCCCCH-----HHHHHHHHccCCccCCCCCCCCC-------------HHHHHHHHHHhc-CHhh
Confidence 9999999999999999975322 12222222111 11111 111 234457777887 6666
Q ss_pred C---CCHHHHHH
Q 006522 626 R---PRMRTVSE 634 (642)
Q Consensus 626 R---Ps~~ev~~ 634 (642)
| +++.|+++
T Consensus 293 r~~r~~~~~~l~ 304 (377)
T cd05629 293 RLGRGGAHEIKS 304 (377)
T ss_pred cCCCCCHHHHhc
Confidence 5 58888875
No 169
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=9.5e-37 Score=309.51 Aligned_cols=259 Identities=24% Similarity=0.376 Sum_probs=197.1
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
...||+|+||.||++.............+++|.+..... ...+.|.+|++++++++|+||+++++++...+..++||||
T Consensus 10 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 88 (280)
T cd05092 10 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASE-SARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLMVFEY 88 (280)
T ss_pred ccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCH-HHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEEEEec
Confidence 467999999999999765432223337899998876432 2346899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcCCCC----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEec
Q 006522 427 IRNGSLYAALHAGPSD----------SLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISG 496 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~----------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~D 496 (642)
+++|+|.++++..... ....+++..+..++.|++.||+|||+ .+++||||||+||++++++.+||+|
T Consensus 89 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~---~~i~H~dlkp~nil~~~~~~~kL~d 165 (280)
T cd05092 89 MRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLAS---LHFVHRDLATRNCLVGQGLVVKIGD 165 (280)
T ss_pred CCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHH---CCeecccccHhhEEEcCCCCEEECC
Confidence 9999999999765321 11248999999999999999999999 8999999999999999999999999
Q ss_pred ccccccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCccc
Q 006522 497 FGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKG 575 (642)
Q Consensus 497 fGla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~~ 575 (642)
||+++......... . .....+++.|+|||+.. +..++.++|||||||++|||+| |+.||.....
T Consensus 166 fg~~~~~~~~~~~~-------~---~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~---- 230 (280)
T cd05092 166 FGMSRDIYSTDYYR-------V---GGRTMLPIRWMPPESIL-YRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSN---- 230 (280)
T ss_pred CCceeEcCCCceee-------c---CCCccccccccCHHHhc-cCCcCchhhHHHHHHHHHHHHcCCCCCCccCCH----
Confidence 99987654321100 0 01223456799999854 4678999999999999999999 9999864221
Q ss_pred HHHHHHHHHhcc-CCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHh
Q 006522 576 LESLVRKAFRER-RPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 638 (642)
Q Consensus 576 l~~~~~~~~~~~-~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 638 (642)
........... ......+++ .+.+++.+||+.||++||++.||.+.|++
T Consensus 231 -~~~~~~~~~~~~~~~~~~~~~-------------~~~~li~~cl~~~P~~Rp~~~~l~~~l~~ 280 (280)
T cd05092 231 -TEAIECITQGRELERPRTCPP-------------EVYAIMQGCWQREPQQRMVIKDIHSRLQA 280 (280)
T ss_pred -HHHHHHHHcCccCCCCCCCCH-------------HHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence 11222221111 111111222 34568888999999999999999998863
No 170
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=2.6e-37 Score=319.53 Aligned_cols=204 Identities=19% Similarity=0.323 Sum_probs=162.1
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEe--CCceEEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYA--NDEKLLIS 424 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~--~~~~~lv~ 424 (642)
+..||+|+||.||+|+...+. ....||+|.+...... ..+.+|++++++++||||+++++++.. ....++||
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~---~~~~~a~k~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~ 79 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGK---DEKEYALKQIEGTGIS---MSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLF 79 (317)
T ss_pred ceEeccCCCeeEEEEEecCCC---ccceEEEEEecCCCCc---HHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEE
Confidence 467999999999999976532 1278999998754322 567899999999999999999999864 45678999
Q ss_pred eeccCCcHHHHHhcCCC----CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeee----CCCCCeEEec
Q 006522 425 DFIRNGSLYAALHAGPS----DSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILL----DDELHPCISG 496 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~----~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl----~~~~~~kl~D 496 (642)
||+++ +|.+++..... .....+++..+..++.||+.||+|||+ .+|+||||||+||++ ++++.+||+|
T Consensus 80 e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~~kl~D 155 (317)
T cd07867 80 DYAEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKIAD 155 (317)
T ss_pred eeeCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHh---CCEEcCCCCHHHEEEccCCCCCCcEEEee
Confidence 99875 88888753321 112358999999999999999999999 899999999999999 5678999999
Q ss_pred ccccccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCC
Q 006522 497 FGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGP 569 (642)
Q Consensus 497 fGla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~ 569 (642)
||+++........ ........||+.|+|||++.....++.++|||||||++|||+||+.||...
T Consensus 156 fG~a~~~~~~~~~---------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~ 219 (317)
T cd07867 156 MGFARLFNSPLKP---------LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred ccceeccCCCccc---------ccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence 9999876432110 001123467889999998665456899999999999999999999999753
No 171
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=9.9e-37 Score=307.49 Aligned_cols=259 Identities=26% Similarity=0.425 Sum_probs=198.7
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEe
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
..+.||+|+||.||+|.....+.. ...||||.++........++|..|+.++++++||||+++++++...+..++|||
T Consensus 8 ~~~~lg~g~~g~vy~~~~~~~~~~--~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e 85 (269)
T cd05065 8 IEEVIGAGEFGEVCRGRLKLPGKR--EIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIITE 85 (269)
T ss_pred EEeEecCCCCCeEEEEEEecCCCC--ceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEEe
Confidence 457899999999999998765321 157999998765444445789999999999999999999999999999999999
Q ss_pred eccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCC
Q 006522 426 FIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPG 505 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 505 (642)
|+++|+|.+++..... .+++.++..++.|++.||+|||+ .+++||||||+||+++.++.+|++|||+++....
T Consensus 86 ~~~~~~L~~~l~~~~~----~~~~~~~~~i~~~l~~al~~lH~---~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~ 158 (269)
T cd05065 86 FMENGALDSFLRQNDG----QFTVIQLVGMLRGIAAGMKYLSE---MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLED 158 (269)
T ss_pred cCCCCcHHHHHhhCCC----CCCHHHHHHHHHHHHHHHHHHHH---CCEeecccChheEEEcCCCcEEECCCcccccccc
Confidence 9999999999976532 48999999999999999999999 8999999999999999999999999999876543
Q ss_pred CCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHHH
Q 006522 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAF 584 (642)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~~l~~~~~~~~ 584 (642)
....... . .......+..|+|||++. +..++.++|||||||++||+++ |..||..... ........
T Consensus 159 ~~~~~~~-----~--~~~~~~~~~~y~~PE~~~-~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~-----~~~~~~i~ 225 (269)
T cd05065 159 DTSDPTY-----T--SSLGGKIPIRWTAPEAIA-YRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN-----QDVINAIE 225 (269)
T ss_pred Ccccccc-----c--cccCCCcceeecCHhHhc-cCcccchhhhhhhHHHHHHHhcCCCCCCCCCCH-----HHHHHHHH
Confidence 2211000 0 000111245699999854 4678999999999999999987 9999864321 12222221
Q ss_pred hc-cCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhh
Q 006522 585 RE-RRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 639 (642)
Q Consensus 585 ~~-~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l 639 (642)
.. ..+..... ...+.+++.+||+.+|++||++.+++..|+++
T Consensus 226 ~~~~~~~~~~~-------------~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 226 QDYRLPPPMDC-------------PTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred cCCcCCCcccC-------------CHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 11 11111111 12345688899999999999999999999875
No 172
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=1e-36 Score=311.93 Aligned_cols=268 Identities=22% Similarity=0.350 Sum_probs=196.0
Q ss_pred ccccCccCCceeEEEEecCCC-----------CCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGS-----------GMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYY 415 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~-----------~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~ 415 (642)
...||+|+||.||++...... ..+....||+|.+..........+|.+|++++++++|+||+++++++.
T Consensus 10 ~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~ 89 (296)
T cd05095 10 KEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRLLAVCI 89 (296)
T ss_pred eeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEe
Confidence 457999999999998654321 112236799999976533333468999999999999999999999999
Q ss_pred eCCceEEEEeeccCCcHHHHHhcCCCCC------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCC
Q 006522 416 ANDEKLLISDFIRNGSLYAALHAGPSDS------LPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDE 489 (642)
Q Consensus 416 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~ 489 (642)
..+..++||||+++|+|.+++....... ...+++.++..++.|++.||+|||+ .+++||||||+||+++++
T Consensus 90 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~---~~i~H~dlkp~Nili~~~ 166 (296)
T cd05095 90 TSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSS---LNFVHRDLATRNCLVGKN 166 (296)
T ss_pred cCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHH---CCeecccCChheEEEcCC
Confidence 9999999999999999999997654221 1247889999999999999999999 899999999999999999
Q ss_pred CCeEEecccccccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh--CCCCCC
Q 006522 490 LHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT--GRLPDA 567 (642)
Q Consensus 490 ~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t--G~~P~~ 567 (642)
+.+||+|||+++.+....... ......++..|+|||.... ..++.++|||||||++|||+| |..||.
T Consensus 167 ~~~~l~dfg~~~~~~~~~~~~----------~~~~~~~~~~~~~pe~~~~-~~~~~~~DiwSlG~~l~el~~~~~~~p~~ 235 (296)
T cd05095 167 YTIKIADFGMSRNLYSGDYYR----------IQGRAVLPIRWMSWESILL-GKFTTASDVWAFGVTLWEILTLCKEQPYS 235 (296)
T ss_pred CCEEeccCcccccccCCccee----------ccCcCcCccccCCHHHHhc-CCccchhhhhHHHHHHHHHHHhCCCCCcc
Confidence 999999999987653321100 0001234567999998544 678999999999999999998 778886
Q ss_pred CCCCCcccHHHHHHHHHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHh
Q 006522 568 GPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 638 (642)
Q Consensus 568 ~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 638 (642)
..... ............... ....+.. ......+.+++.+||+.||++||++.||++.|++
T Consensus 236 ~~~~~--~~~~~~~~~~~~~~~--~~~~~~~------~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 236 QLSDE--QVIENTGEFFRDQGR--QVYLPKP------ALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred ccChH--HHHHHHHHHHhhccc--cccCCCC------CCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 43221 111111111111100 0000000 0011345679999999999999999999999874
No 173
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=3.5e-37 Score=331.23 Aligned_cols=258 Identities=19% Similarity=0.272 Sum_probs=186.4
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeC--------
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN-------- 417 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~-------- 417 (642)
....||+|+||.||+|.....+ +.||||++.... ....+|+.+|++++|||||++++++...
T Consensus 70 ~~~~LG~G~fg~Vy~~~~~~~~-----~~vAiK~i~~~~-----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~ 139 (440)
T PTZ00036 70 LGNIIGNGSFGVVYEAICIDTS-----EKVAIKKVLQDP-----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN 139 (440)
T ss_pred EeEEEEeCCCEEEEEEEECCCC-----CEEEEEEEecCc-----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence 3578999999999999987654 789999886532 2345799999999999999999987542
Q ss_pred CceEEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCC-CeEEec
Q 006522 418 DEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDEL-HPCISG 496 (642)
Q Consensus 418 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~-~~kl~D 496 (642)
...++||||+++ +|.+++...... ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++ .+||+|
T Consensus 140 ~~l~lvmE~~~~-~l~~~~~~~~~~-~~~l~~~~~~~~~~qi~~gL~yLH~---~~IiHrDLKp~NILl~~~~~~vkL~D 214 (440)
T PTZ00036 140 IFLNVVMEFIPQ-TVHKYMKHYARN-NHALPLFLVKLYSYQLCRALAYIHS---KFICHRDLKPQNLLIDPNTHTLKLCD 214 (440)
T ss_pred eEEEEEEecCCc-cHHHHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCcCHHHEEEcCCCCceeeec
Confidence 135689999985 787777543211 1358999999999999999999999 8999999999999998654 799999
Q ss_pred ccccccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccH
Q 006522 497 FGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGL 576 (642)
Q Consensus 497 fGla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l 576 (642)
||+++.+.... ......||+.|+|||++.....++.++|||||||++|||+||..||.+.... ..+
T Consensus 215 FGla~~~~~~~-------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~-~~~ 280 (440)
T PTZ00036 215 FGSAKNLLAGQ-------------RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSV-DQL 280 (440)
T ss_pred cccchhccCCC-------------CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-HHH
Confidence 99998654221 1113467889999998665457899999999999999999999999753321 112
Q ss_pred HHHHHHHHhcc---------C-----CCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 577 ESLVRKAFRER---------R-----PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 577 ~~~~~~~~~~~---------~-----~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
...++. .... . .++......+..... .....++.+++.+||+.||.+|||+.|+++
T Consensus 281 ~~i~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p-~~~~~~~~~li~~~L~~dP~~R~ta~e~l~ 350 (440)
T PTZ00036 281 VRIIQV-LGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFP-KGTPDDAINFISQFLKYEPLKRLNPIEALA 350 (440)
T ss_pred HHHHHH-hCCCCHHHHHHhchhhhcccCCccCchhHHHHhc-cCCCHHHHHHHHHHCCCChhHCcCHHHHhC
Confidence 222111 0000 0 000001111111000 011245778999999999999999999884
No 174
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=1.4e-37 Score=329.89 Aligned_cols=209 Identities=21% Similarity=0.282 Sum_probs=169.2
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC--ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 424 (642)
.+.||+|+||.||+|.....+ +.||+|.+.... .....+.+.+|+.++++++|||||++++++...+..++||
T Consensus 6 ~~~LG~G~~g~Vy~a~~~~~~-----~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (382)
T cd05625 6 IKTLGIGAFGEVCLARKVDTK-----ALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM 80 (382)
T ss_pred EEEEEeCCCEEEEEEEECCCC-----CEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEE
Confidence 467999999999999987765 799999987542 1223467889999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCC
Q 006522 425 DFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLP 504 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 504 (642)
||+++|+|.+++.... .+++.....++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 81 E~~~gg~L~~~l~~~~-----~~~e~~~~~~~~qi~~al~~lH~---~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~ 152 (382)
T cd05625 81 DYIPGGDMMSLLIRMG-----IFPEDLARFYIAELTCAVESVHK---MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFR 152 (382)
T ss_pred eCCCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEEeECCCCcccc
Confidence 9999999999997643 38889999999999999999999 899999999999999999999999999986432
Q ss_pred CCCcccc--c---------------------------------ceeeecCCCcccccCCCcccCccccccCCCCCcccch
Q 006522 505 GTSKVTK--N---------------------------------ETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDV 549 (642)
Q Consensus 505 ~~~~~~~--~---------------------------------~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV 549 (642)
....... . .............+||+.|+|||++. +..++.++||
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~~~Di 231 (382)
T cd05625 153 WTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLL-RTGYTQLCDW 231 (382)
T ss_pred ccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhc-CCCCCCeeeE
Confidence 1100000 0 00000000112357999999999855 4778999999
Q ss_pred HHHHHHHHHHHhCCCCCCCC
Q 006522 550 YSFGIVLLEILTGRLPDAGP 569 (642)
Q Consensus 550 ~S~Gvvl~el~tG~~P~~~~ 569 (642)
||+||++|||+||+.||...
T Consensus 232 wSlGvil~elltG~~Pf~~~ 251 (382)
T cd05625 232 WSVGVILYEMLVGQPPFLAQ 251 (382)
T ss_pred EechHHHHHHHhCCCCCCCC
Confidence 99999999999999999753
No 175
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-38 Score=320.09 Aligned_cols=242 Identities=22% Similarity=0.344 Sum_probs=198.6
Q ss_pred cccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCc--cccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEe
Q 006522 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA--TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 348 ~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
..||.|+||.||-+++..+. .+||||++.-... .....+++.|+..|.+++|||+|.+.|||......+||||
T Consensus 32 rEIGHGSFGAVYfArd~~n~-----evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME 106 (948)
T KOG0577|consen 32 REIGHGSFGAVYFARDVRNS-----EVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME 106 (948)
T ss_pred HHhcCCccceeEEeeccCcc-----ceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence 56899999999999998887 8999999975422 2233789999999999999999999999999999999999
Q ss_pred eccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCC
Q 006522 426 FIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPG 505 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 505 (642)
||-| |-.|++.-++. ++.+..+..|+.+.+.||+|||+ .+.||||||..|||+.+.|.+|++|||.|..+..
T Consensus 107 YClG-SAsDlleVhkK----plqEvEIAAi~~gaL~gLaYLHS---~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~P 178 (948)
T KOG0577|consen 107 YCLG-SASDLLEVHKK----PLQEVEIAAITHGALQGLAYLHS---HNRIHRDIKAGNILLSEPGLVKLADFGSASIMAP 178 (948)
T ss_pred HHhc-cHHHHHHHHhc----cchHHHHHHHHHHHHHHHHHHHH---hhHHhhhccccceEecCCCeeeeccccchhhcCc
Confidence 9964 88888876653 58999999999999999999999 7899999999999999999999999999876543
Q ss_pred CCcccccceeeecCCCcccccCCCcccCcccccc--CCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHH
Q 006522 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIY--GSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKA 583 (642)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~ 583 (642)
. ...+|||+|||||+++. .+.|+-|+||||+||++.||.-.++|+..+.. +..+....
T Consensus 179 A----------------nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNA----MSALYHIA 238 (948)
T KOG0577|consen 179 A----------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA----MSALYHIA 238 (948)
T ss_pred h----------------hcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchH----HHHHHHHH
Confidence 3 25789999999998654 47899999999999999999999999875432 22222222
Q ss_pred HhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 584 FRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 584 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
-.+.+. +. ..+....+..++-.|++.-|++|||..+++.
T Consensus 239 QNesPt--------Lq----s~eWS~~F~~Fvd~CLqKipqeRptse~ll~ 277 (948)
T KOG0577|consen 239 QNESPT--------LQ----SNEWSDYFRNFVDSCLQKIPQERPTSEELLK 277 (948)
T ss_pred hcCCCC--------CC----CchhHHHHHHHHHHHHhhCcccCCcHHHHhh
Confidence 222222 21 2234456777899999999999999988765
No 176
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=1.5e-36 Score=304.59 Aligned_cols=247 Identities=27% Similarity=0.439 Sum_probs=191.7
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
...||+|++|.||++....+ ..+|+|.+..... ..+.|.+|+.++++++|||++++++++. .+..++||||
T Consensus 11 ~~~ig~g~~~~v~~~~~~~~------~~~~lK~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~ 81 (260)
T cd05069 11 DVKLGQGCFGEVWMGTWNGT------TKVAIKTLKPGTM--MPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEF 81 (260)
T ss_pred eeeecCcCCCeEEEEEEcCC------ceEEEEEcccCCc--cHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEc
Confidence 35799999999999987665 5689998865432 2367899999999999999999999875 4568999999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCC
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 506 (642)
+++|+|.++++.... ..++|..+..++.|++.||+|||+ .+++||||||+||++++++.+||+|||+++.....
T Consensus 82 ~~~~~L~~~~~~~~~---~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~ 155 (260)
T cd05069 82 MGKGSLLDFLKEGDG---KYLKLPQLVDMAAQIADGMAYIER---MNYIHRDLRAANILVGDNLVCKIADFGLARLIEDN 155 (260)
T ss_pred CCCCCHHHHHhhCCC---CCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccCcceEEEcCCCeEEECCCccceEccCC
Confidence 999999999976432 248999999999999999999999 89999999999999999999999999999765432
Q ss_pred CcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHHHh
Q 006522 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFR 585 (642)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~~l~~~~~~~~~ 585 (642)
... ......++..|+|||+.. +..++.++|||||||++|||+| |+.||.+... .........
T Consensus 156 ~~~-----------~~~~~~~~~~y~~Pe~~~-~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~-----~~~~~~~~~ 218 (260)
T cd05069 156 EYT-----------ARQGAKFPIKWTAPEAAL-YGRFTIKSDVWSFGILLTELVTKGRVPYPGMVN-----REVLEQVER 218 (260)
T ss_pred ccc-----------ccCCCccchhhCCHHHhc-cCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHHc
Confidence 110 001223456799999844 4678999999999999999999 9999875322 112222211
Q ss_pred ccC-CCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHh
Q 006522 586 ERR-PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 638 (642)
Q Consensus 586 ~~~-~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 638 (642)
... +....+ ...+.+++.+||+.||++||+++++.+.|++
T Consensus 219 ~~~~~~~~~~-------------~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 219 GYRMPCPQGC-------------PESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred CCCCCCCccc-------------CHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 111 111111 1245668889999999999999999999975
No 177
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.8e-36 Score=315.59 Aligned_cols=264 Identities=24% Similarity=0.350 Sum_probs=201.0
Q ss_pred cccccCccCCceeEEEEecCCCC--CCCCeEEEEEEecCCCccccHHHHHHHHHHHhcc-cCCCeeeEEEEEEeCCceEE
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSG--MGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLL 422 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~l 422 (642)
....||+|+||.||++....... ......||+|.++........+++.+|+++++++ +||||++++++|...+..++
T Consensus 16 i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 95 (334)
T cd05100 16 LGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV 95 (334)
T ss_pred ecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCCceEE
Confidence 45789999999999998643221 1222579999887643333457899999999999 89999999999999999999
Q ss_pred EEeeccCCcHHHHHhcCCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCC
Q 006522 423 ISDFIRNGSLYAALHAGPS-----------DSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELH 491 (642)
Q Consensus 423 v~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~ 491 (642)
||||+++|+|.+++..... .....++|.+++.++.|++.||+|||+ .+++||||||+||++++++.
T Consensus 96 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~---~givH~dlkp~Nill~~~~~ 172 (334)
T cd05100 96 LVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLAS---QKCIHRDLAARNVLVTEDNV 172 (334)
T ss_pred EEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH---CCeeccccccceEEEcCCCc
Confidence 9999999999999976431 112358999999999999999999999 89999999999999999999
Q ss_pred eEEecccccccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCC
Q 006522 492 PCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPE 570 (642)
Q Consensus 492 ~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~ 570 (642)
+||+|||+++......... ......++..|+|||++.. ..++.++|||||||++|||++ |..||....
T Consensus 173 ~kL~Dfg~~~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~~g~~p~~~~~ 241 (334)
T cd05100 173 MKIADFGLARDVHNIDYYK----------KTTNGRLPVKWMAPEALFD-RVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP 241 (334)
T ss_pred EEECCcccceecccccccc----------cccCCCcCceEcCHHHhcc-CCcCchhhhHHHHHHHHHHHhcCCCCCCCCC
Confidence 9999999987654321100 0011234567999998544 678999999999999999999 888886432
Q ss_pred CCcccHHHHHHHHHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhhh
Q 006522 571 NDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 640 (642)
Q Consensus 571 ~~~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l~ 640 (642)
...+.......... +. .. .....+.+++.+||+.+|++||++.|+++.|+++.
T Consensus 242 -----~~~~~~~~~~~~~~--~~-~~---------~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~ 294 (334)
T cd05100 242 -----VEELFKLLKEGHRM--DK-PA---------NCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVL 294 (334)
T ss_pred -----HHHHHHHHHcCCCC--CC-CC---------CCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHh
Confidence 23333332222111 11 00 01124567899999999999999999999999875
No 178
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=9.5e-37 Score=309.33 Aligned_cols=246 Identities=21% Similarity=0.340 Sum_probs=190.3
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
...||+|+||.||++.....+ +.||+|.+.........++|.+|++++++++||||+++++++...+..++||||
T Consensus 6 ~~~lg~g~~~~v~~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 80 (279)
T cd06619 6 QEILGHGNGGTVYKAYHLLTR-----RILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEF 80 (279)
T ss_pred eeeeccCCCeEEEEEEEcCCC-----cEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEec
Confidence 357999999999999987654 789999987643333446799999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCC
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 506 (642)
+++|+|..+. .+++.....++.|++.||+|||+ .+|+|+||||+||+++.++.+||+|||++......
T Consensus 81 ~~~~~l~~~~---------~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~ 148 (279)
T cd06619 81 MDGGSLDVYR---------KIPEHVLGRIAVAVVKGLTYLWS---LKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS 148 (279)
T ss_pred CCCCChHHhh---------cCCHHHHHHHHHHHHHHHHHHHH---CCEeeCCCCHHHEEECCCCCEEEeeCCcceecccc
Confidence 9999997542 27888999999999999999999 89999999999999999999999999998764322
Q ss_pred CcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCccc--HHHHHHHHH
Q 006522 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKG--LESLVRKAF 584 (642)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~--l~~~~~~~~ 584 (642)
. .....||..|+|||++.. ..++.++|||||||++|||+||+.||......... .........
T Consensus 149 ~--------------~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 213 (279)
T cd06619 149 I--------------AKTYVGTNAYMAPERISG-EQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIV 213 (279)
T ss_pred c--------------ccCCCCChhhcCceeecC-CCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHh
Confidence 1 113467888999998554 67899999999999999999999999753221111 111111111
Q ss_pred hccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 006522 585 RERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSES 635 (642)
Q Consensus 585 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~ 635 (642)
....+ ..... ....++.+++.+||+.+|++||+++|+++.
T Consensus 214 ~~~~~--~~~~~---------~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 214 DEDPP--VLPVG---------QFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred ccCCC--CCCCC---------cCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 11111 00000 011235668889999999999999998753
No 179
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=1.3e-36 Score=309.77 Aligned_cols=260 Identities=25% Similarity=0.375 Sum_probs=197.6
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
...||+|+||.||++.............||+|.+.........++|.+|+.++++++||||+++++++...+..++||||
T Consensus 10 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 89 (288)
T cd05050 10 VRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPMCLLFEY 89 (288)
T ss_pred cccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCccEEEEec
Confidence 46789999999999987532111122789999987654433447799999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcCCC-----------------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCC
Q 006522 427 IRNGSLYAALHAGPS-----------------DSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDE 489 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~-----------------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~ 489 (642)
+++|+|.+++..... .....+++..++.++.|++.||+|||+ .+++||||||+||+++++
T Consensus 90 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~---~~i~H~dl~p~nil~~~~ 166 (288)
T cd05050 90 MAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSE---RKFVHRDLATRNCLVGEN 166 (288)
T ss_pred CCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---CCeecccccHhheEecCC
Confidence 999999999975321 112348899999999999999999999 899999999999999999
Q ss_pred CCeEEecccccccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCC
Q 006522 490 LHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAG 568 (642)
Q Consensus 490 ~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~ 568 (642)
+.+||+|||+++.+........ ......+..|+|||... +..++.++|||||||++|||++ |..||.+
T Consensus 167 ~~~~l~dfg~~~~~~~~~~~~~----------~~~~~~~~~y~aPE~~~-~~~~~~~~Dv~slG~il~el~~~~~~p~~~ 235 (288)
T cd05050 167 MVVKIADFGLSRNIYSADYYKA----------SENDAIPIRWMPPESIF-YNRYTTESDVWAYGVVLWEIFSYGMQPYYG 235 (288)
T ss_pred CceEECccccceecccCccccc----------cCCCccChhhcCHHHHh-cCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Confidence 9999999999876533211000 00122355699999854 4678999999999999999998 8888864
Q ss_pred CCCCcccHHHHHHHHHhccC-CCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHh
Q 006522 569 PENDGKGLESLVRKAFRERR-PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 638 (642)
Q Consensus 569 ~~~~~~~l~~~~~~~~~~~~-~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 638 (642)
.. ............. +..+.+ ..++.+++.+||+.||++|||+.|+++.|++
T Consensus 236 ~~-----~~~~~~~~~~~~~~~~~~~~-------------~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 236 MA-----HEEVIYYVRDGNVLSCPDNC-------------PLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred CC-----HHHHHHHHhcCCCCCCCCCC-------------CHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 22 1233332222211 111111 1346679999999999999999999999874
No 180
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=4.5e-37 Score=318.22 Aligned_cols=240 Identities=18% Similarity=0.264 Sum_probs=189.8
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC--ccccHHHHHHHHHHHhccc-CCCeeeEEEEEEeCCceEE
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQ-HPNIVRLKAFYYANDEKLL 422 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~l 422 (642)
....||+|+||.||++....++ +.||+|.+.... .....+.+..|..++..+. |++|+++++++...+..++
T Consensus 4 ~~~~lg~G~~g~Vy~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~l 78 (323)
T cd05615 4 FLMVLGKGSFGKVMLAERKGTD-----ELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYF 78 (323)
T ss_pred EEEEEEecCCeEEEEEEECCCC-----CEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEE
Confidence 3468999999999999987665 799999987531 2223466888999998885 5778889999999999999
Q ss_pred EEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEeccccccc
Q 006522 423 ISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRL 502 (642)
Q Consensus 423 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 502 (642)
||||+++|+|.+++.... .+++.++..++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++.
T Consensus 79 v~Ey~~~g~L~~~i~~~~-----~l~~~~~~~i~~qi~~al~~lH~---~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~ 150 (323)
T cd05615 79 VMEYVNGGDLMYHIQQVG-----KFKEPQAVFYAAEISVGLFFLHR---RGIIYRDLKLDNVMLDSEGHIKIADFGMCKE 150 (323)
T ss_pred EEcCCCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEeccccccc
Confidence 999999999999997643 38999999999999999999999 8999999999999999999999999999875
Q ss_pred CCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHH
Q 006522 503 LPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRK 582 (642)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~ 582 (642)
..... .......||+.|+|||++. +..++.++||||+||++|||+||+.||.... .....+.
T Consensus 151 ~~~~~------------~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslGvil~elltG~~pf~~~~-----~~~~~~~ 212 (323)
T cd05615 151 HMVDG------------VTTRTFCGTPDYIAPEIIA-YQPYGKSVDWWAYGVLLYEMLAGQPPFDGED-----EDELFQS 212 (323)
T ss_pred cCCCC------------ccccCccCCccccCHHHHc-CCCCCCccchhhhHHHHHHHHhCCCCCCCCC-----HHHHHHH
Confidence 32211 0112346889999999854 4678999999999999999999999997532 1233333
Q ss_pred HHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCH
Q 006522 583 AFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRM 629 (642)
Q Consensus 583 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~ 629 (642)
........+..+++ .+.+++.+|++.+|.+|++.
T Consensus 213 i~~~~~~~p~~~~~-------------~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 213 IMEHNVSYPKSLSK-------------EAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred HHhCCCCCCccCCH-------------HHHHHHHHHcccCHhhCCCC
Confidence 33333322322222 34568888999999999985
No 181
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=1.5e-36 Score=308.72 Aligned_cols=267 Identities=26% Similarity=0.414 Sum_probs=192.7
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeC--CceEEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN--DEKLLIS 424 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~lv~ 424 (642)
...||+|+||.||++....-. ......||+|.+..... ...+.|.+|++++++++||||+++++++... ...++||
T Consensus 9 ~~~lg~g~~g~v~~~~~~~~~-~~~~~~v~iK~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 86 (284)
T cd05081 9 IQQLGKGNFGSVELCRYDPLQ-DNTGEVVAVKKLQHSTA-EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLVM 86 (284)
T ss_pred eeeccCCCCceEEEEEecCCc-CCCCcEEEEEEeccCCH-HHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEEEE
Confidence 467999999999999753210 11127899999876432 2347889999999999999999999988654 4678999
Q ss_pred eeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCC
Q 006522 425 DFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLP 504 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 504 (642)
||+++|+|.+++..... .++|..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++...
T Consensus 87 e~~~~~~L~~~l~~~~~----~l~~~~~~~~~~~l~~aL~~LH~---~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~ 159 (284)
T cd05081 87 EYLPYGSLRDYLQKHRE----RLDHRKLLLYASQICKGMEYLGS---KRYVHRDLATRNILVESENRVKIGDFGLTKVLP 159 (284)
T ss_pred EecCCCCHHHHHHhcCc----CCCHHHHHHHHHHHHHHHHHHHH---CCceeccCCHhhEEECCCCeEEECCCccccccc
Confidence 99999999999975432 48999999999999999999999 899999999999999999999999999998764
Q ss_pred CCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHH
Q 006522 505 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAF 584 (642)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~ 584 (642)
....... . .....++..|+|||+.. +..++.++|||||||++|||++|..|+...... +.+..
T Consensus 160 ~~~~~~~------~---~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~------~~~~~- 222 (284)
T cd05081 160 QDKEYYK------V---REPGESPIFWYAPESLT-ESKFSVASDVWSFGVVLYELFTYSDKSCSPPAE------FMRMM- 222 (284)
T ss_pred CCCccee------e---cCCCCCceEeeCHHHhc-cCCcChHHHHHHHHHHHHHHhhcCCcCCCcchh------hhhhc-
Confidence 3321100 0 00112345699999854 467899999999999999999988775432111 00000
Q ss_pred hccCCCccccChhhhhch-------hHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhhh
Q 006522 585 RERRPLSEVIDPALVKEI-------HAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 640 (642)
Q Consensus 585 ~~~~~~~~~~d~~l~~~~-------~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l~ 640 (642)
..... .......+.... ........+.+++.+||+.+|++|||+.|+++.|+.++
T Consensus 223 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~~ 284 (284)
T cd05081 223 GNDKQ-GQMIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAIR 284 (284)
T ss_pred ccccc-cccchHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhcC
Confidence 00000 000000000000 00011134677999999999999999999999999874
No 182
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=5.1e-37 Score=324.35 Aligned_cols=258 Identities=18% Similarity=0.282 Sum_probs=191.3
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC-ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCC-----ce
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYAND-----EK 420 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~-----~~ 420 (642)
.+.||+|+||.||++....++ +.||||++.... .....+++.+|+++++.++||||+++++++...+ ..
T Consensus 5 ~~~lg~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 79 (372)
T cd07853 5 DRPIGYGAFGVVWSVTDPRDG-----KRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEI 79 (372)
T ss_pred cceeeeCCCEEEEEEEECCCC-----CEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceE
Confidence 467999999999999987654 889999987542 2223467889999999999999999999998776 78
Q ss_pred EEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEeccccc
Q 006522 421 LLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLN 500 (642)
Q Consensus 421 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla 500 (642)
|+|+||+. ++|.+.+.... .+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||++
T Consensus 80 ~lv~e~~~-~~l~~~~~~~~-----~l~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~Nili~~~~~~kL~Dfg~a 150 (372)
T cd07853 80 YVVTELMQ-SDLHKIIVSPQ-----PLSSDHVKVFLYQILRGLKYLHS---AGILHRDIKPGNLLVNSNCVLKICDFGLA 150 (372)
T ss_pred EEEeeccc-cCHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChHHEEECCCCCEEeccccce
Confidence 99999997 58888886533 48999999999999999999999 89999999999999999999999999999
Q ss_pred ccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHH
Q 006522 501 RLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLV 580 (642)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~ 580 (642)
+....... .......+|..|+|||++.....++.++||||+||++|||+||+.||...... ..+ ..+
T Consensus 151 ~~~~~~~~-----------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~-~~i 217 (372)
T cd07853 151 RVEEPDES-----------KHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPI-QQL-DLI 217 (372)
T ss_pred eecccCcc-----------ccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHH-HHH-HHH
Confidence 76432211 01112356788999998665456899999999999999999999999753221 111 111
Q ss_pred HHHHh-------------------ccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 581 RKAFR-------------------ERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 581 ~~~~~-------------------~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
..... ......... +.+.. . ......++.+++.+|++.||++|||+.|+++
T Consensus 218 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~-~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 287 (372)
T cd07853 218 TDLLGTPSLEAMRSACEGARAHILRGPHKPPSL-PVLYT-L-SSQATHEAVHLLCRMLVFDPDKRISAADALA 287 (372)
T ss_pred HHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCch-HHhcc-c-CCCCCHHHHHHHHHhCCCChhhCcCHHHHhc
Confidence 10000 000000000 00000 0 0011235678999999999999999999985
No 183
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=1.2e-36 Score=304.34 Aligned_cols=246 Identities=23% Similarity=0.355 Sum_probs=196.1
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC-ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEe
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
.+.||+|++|.||++....++ +.|++|.+.... .....+++.+|++++++++||||+++++++...+..++|||
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~-----~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08529 5 LNKIGKGSFGVVFKVVRKADK-----RVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVME 79 (256)
T ss_pred eEEecCCCCeEEEEEEEcCCC-----cEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEE
Confidence 467999999999999987665 889999986532 22334778999999999999999999999999999999999
Q ss_pred eccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCC
Q 006522 426 FIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPG 505 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 505 (642)
|+++++|.++++.... ..+++..+..++.|++.||.|||+ .+++||||||+||++++++.+||+|||+++....
T Consensus 80 ~~~~~~L~~~l~~~~~---~~~~~~~~~~i~~~l~~al~~lH~---~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~ 153 (256)
T cd08529 80 YAENGDLHKLLKMQRG---RPLPEDQVWRFFIQILLGLAHLHS---KKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSD 153 (256)
T ss_pred eCCCCcHHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEEeCCCCEEEcccccceeccC
Confidence 9999999999986532 258999999999999999999999 8999999999999999999999999999886543
Q ss_pred CCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHh
Q 006522 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR 585 (642)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~ 585 (642)
.... .....|+..|+|||+... ..++.++|||||||++|||+||+.||..... .........
T Consensus 154 ~~~~------------~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~ 215 (256)
T cd08529 154 NTNF------------ANTIVGTPYYLSPELCED-KPYNEKSDVWALGVVLYECCTGKHPFDANNQ-----GALILKIIR 215 (256)
T ss_pred ccch------------hhccccCccccCHHHhcC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHc
Confidence 2110 112356778999998554 6789999999999999999999999974321 222222222
Q ss_pred ccC-CCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 586 ERR-PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 586 ~~~-~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
... +....++ ..+.+++.+||+.+|++||++.++++
T Consensus 216 ~~~~~~~~~~~-------------~~~~~~i~~~l~~~p~~Rp~~~~ll~ 252 (256)
T cd08529 216 GVFPPVSQMYS-------------QQLAQLIDQCLTKDYRQRPDTFQLLR 252 (256)
T ss_pred CCCCCCccccC-------------HHHHHHHHHHccCCcccCcCHHHHhh
Confidence 211 1111222 24566888999999999999999986
No 184
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-37 Score=307.43 Aligned_cols=263 Identities=22% Similarity=0.329 Sum_probs=200.0
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhc--ccCCCeeeEEEEEEeCC----ce
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIAR--VQHPNIVRLKAFYYAND----EK 420 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~--l~H~nIv~l~~~~~~~~----~~ 420 (642)
.+.||+|.||.||+|.+.. ..||||++...+. +.+.+|.+|.+. |+|+||..+++.-..++ +.
T Consensus 216 ~e~IGkGRyGEVwrG~wrG-------e~VAVKiF~srdE----~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQL 284 (513)
T KOG2052|consen 216 QEIIGKGRFGEVWRGRWRG-------EDVAVKIFSSRDE----RSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQL 284 (513)
T ss_pred EEEecCccccceeeccccC-------CceEEEEecccch----hhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEE
Confidence 4789999999999999876 5799999986543 556677777654 49999999998876543 68
Q ss_pred EEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-----cCCCCceecCCCCCCeeeCCCCCeEEe
Q 006522 421 LLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHE-----YSPRKYVHGNIKSTKILLDDELHPCIS 495 (642)
Q Consensus 421 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-----~~~~~iiHrDlkp~NILl~~~~~~kl~ 495 (642)
+||.||.++|||+|+|... .++.+..++++.-+|.||+|||. +..+.|.|||||+.|||+..++.+.|+
T Consensus 285 wLvTdYHe~GSL~DyL~r~------tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IA 358 (513)
T KOG2052|consen 285 WLVTDYHEHGSLYDYLNRN------TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIA 358 (513)
T ss_pred EEeeecccCCcHHHHHhhc------cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEe
Confidence 9999999999999999864 38889999999999999999996 344679999999999999999999999
Q ss_pred cccccccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCC-----cccchHHHHHHHHHHHhC--------
Q 006522 496 GFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFT-----QKCDVYSFGIVLLEILTG-------- 562 (642)
Q Consensus 496 DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~-----~~sDV~S~Gvvl~el~tG-------- 562 (642)
|+|||-........ ........+||.+|||||++...-... ..+||||||.|+||++-+
T Consensus 359 DLGLAv~h~~~t~~--------idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~e 430 (513)
T KOG2052|consen 359 DLGLAVRHDSDTDT--------IDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVE 430 (513)
T ss_pred eceeeEEecccCCc--------ccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEeh
Confidence 99999765544211 222334568999999999965432221 478999999999999863
Q ss_pred --CCCCCCCCCCcccHHHHHHHHHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhhh
Q 006522 563 --RLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 640 (642)
Q Consensus 563 --~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l~ 640 (642)
+.||.+....+....+..+..--++ +.+.++..+ +..+.+..+.++|..||..+|..|-|+--+-+.|.++.
T Consensus 431 ey~~Pyyd~Vp~DPs~eeMrkVVCv~~--~RP~ipnrW----~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~ 504 (513)
T KOG2052|consen 431 EYQLPYYDVVPSDPSFEEMRKVVCVQK--LRPNIPNRW----KSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLS 504 (513)
T ss_pred hhcCCcccCCCCCCCHHHHhcceeecc--cCCCCCccc----ccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHh
Confidence 4677765544444443322211111 122223322 33566778889999999999999999988888887764
No 185
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=1.1e-36 Score=304.80 Aligned_cols=254 Identities=23% Similarity=0.377 Sum_probs=197.3
Q ss_pred ccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEeecc
Q 006522 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIR 428 (642)
Q Consensus 349 ~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~ 428 (642)
.||+|++|.||+|.+...+ +....||+|.+.........++|.+|+.++++++||||+++++++.. ...++||||++
T Consensus 2 ~ig~g~~~~v~~~~~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~ 78 (257)
T cd05040 2 KLGDGSFGVVRRGEWSTSG--GKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAP 78 (257)
T ss_pred cCCccCcccEEeeeEecCC--CCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecC
Confidence 6899999999999986632 22257999999876443445789999999999999999999999988 88999999999
Q ss_pred CCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCCCc
Q 006522 429 NGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSK 508 (642)
Q Consensus 429 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 508 (642)
+|+|.+++..... ..++|.....++.|++.||+|||+ .+++||||||+||+++.++.+||+|||+++.......
T Consensus 79 ~~~L~~~l~~~~~---~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~ 152 (257)
T cd05040 79 LGSLLDRLRKDAL---GHFLISTLCDYAVQIANGMRYLES---KRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNED 152 (257)
T ss_pred CCcHHHHHHhccc---ccCcHHHHHHHHHHHHHHHHHHHh---CCccccccCcccEEEecCCEEEecccccccccccccc
Confidence 9999999986542 258999999999999999999999 8999999999999999999999999999987643221
Q ss_pred ccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHHHhcc
Q 006522 509 VTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRER 587 (642)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~~l~~~~~~~~~~~ 587 (642)
... . .....++..|+|||+.. +..++.++|||||||++|||+| |+.||..... .+..+......
T Consensus 153 ~~~------~---~~~~~~~~~y~~pE~~~-~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~-----~~~~~~~~~~~ 217 (257)
T cd05040 153 HYV------M---EEHLKVPFAWCAPESLR-TRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSG-----SQILKKIDKEG 217 (257)
T ss_pred cee------c---ccCCCCCceecCHHHhc-ccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHHhcC
Confidence 110 0 01234667899999844 4678999999999999999999 9999864221 22222222111
Q ss_pred CCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHH
Q 006522 588 RPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 637 (642)
Q Consensus 588 ~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~ 637 (642)
.... .+. .....+.+++.+||+.+|++||++.|+++.|.
T Consensus 218 ~~~~---~~~--------~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 218 ERLE---RPE--------ACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred CcCC---CCc--------cCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 1100 000 01134567889999999999999999999885
No 186
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=9.3e-38 Score=327.55 Aligned_cols=255 Identities=20% Similarity=0.294 Sum_probs=195.8
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC--ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 424 (642)
...||+|+||.||+|.....+ +.||||+++... .....+.+.+|++++..++||||+++++++...+..++||
T Consensus 6 ~~~lg~G~~g~Vy~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 6 IKVIGRGAFGEVWLVRDKDTG-----QVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred EEEEEeCCcEEEEEEEECCCC-----CEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 467999999999999988654 899999997542 1233467899999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCC
Q 006522 425 DFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLP 504 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 504 (642)
||+++|+|.+++.... .+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++...
T Consensus 81 e~~~~~~L~~~l~~~~-----~l~~~~~~~i~~qi~~aL~~LH~---~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~ 152 (350)
T cd05573 81 EYMPGGDLMNLLIRKD-----VFPEETARFYIAELVLALDSVHK---LGFIHRDIKPDNILIDADGHIKLADFGLCKKMN 152 (350)
T ss_pred cCCCCCCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEeecCCCCccCc
Confidence 9999999999998652 48999999999999999999999 899999999999999999999999999998764
Q ss_pred CCCcccc-----------------cceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCC
Q 006522 505 GTSKVTK-----------------NETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDA 567 (642)
Q Consensus 505 ~~~~~~~-----------------~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~ 567 (642)
....... ...............||+.|+|||++.. ..++.++|||||||++|||+||+.||.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~ell~g~~Pf~ 231 (350)
T cd05573 153 KAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRG-TPYGLECDWWSLGVILYEMLYGFPPFY 231 (350)
T ss_pred ccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcC-CCCCCceeeEecchhhhhhccCCCCCC
Confidence 4320000 0000000111224568999999998554 688999999999999999999999997
Q ss_pred CCCCCcccHHHHHHHHHh--ccCCCcc--ccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCC-HHHHHH
Q 006522 568 GPENDGKGLESLVRKAFR--ERRPLSE--VIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPR-MRTVSE 634 (642)
Q Consensus 568 ~~~~~~~~l~~~~~~~~~--~~~~~~~--~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs-~~ev~~ 634 (642)
.... ......... .....+. .+++ .+.+++.+|+. ||++||+ +.|+++
T Consensus 232 ~~~~-----~~~~~~i~~~~~~~~~p~~~~~~~-------------~~~~li~~ll~-dp~~R~~s~~~ll~ 284 (350)
T cd05573 232 SDTL-----QETYNKIINWKESLRFPPDPPVSP-------------EAIDLICRLLC-DPEDRLGSFEEIKS 284 (350)
T ss_pred CCCH-----HHHHHHHhccCCcccCCCCCCCCH-------------HHHHHHHHHcc-ChhhcCCCHHHHhc
Confidence 5331 222222222 1111111 1122 34457778997 9999999 999986
No 187
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=1.5e-36 Score=305.66 Aligned_cols=258 Identities=19% Similarity=0.297 Sum_probs=201.2
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCC--CccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG--DATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 424 (642)
.+.||+|++|.||+|....++ +.||+|.++.. ......+.+.+|++++++++|+||+++++++...+..++||
T Consensus 7 ~~~lg~g~~~~v~~~~~~~~~-----~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 7 EKKIGKGQFSVVYKAICLLDG-----RVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred eeeeccCCceEEEEEEEcCCC-----CEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 467999999999999998554 78999988643 22223478999999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCC
Q 006522 425 DFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLP 504 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 504 (642)
||+++|+|.+++...... ...+++.++..++.|+++||+|||+ .+++||||||+||+++.++.++|+|||+++...
T Consensus 82 e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~ 157 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQ-KRLIPERTIWKYFVQLCSALEHMHS---KRIMHRDIKPANVFITATGVVKLGDLGLGRFFS 157 (267)
T ss_pred ecCCCCCHHHHHHHhccc-CCCcCHHHHHHHHHHHHHHHHHHHh---CCEecCCcChhhEEECCCCcEEEeccceeeecc
Confidence 999999999998653221 2358999999999999999999999 899999999999999999999999999987653
Q ss_pred CCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHH
Q 006522 505 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAF 584 (642)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~ 584 (642)
.... ......++..|+|||.+. +..++.++|||||||++|||++|+.||..... ..........
T Consensus 158 ~~~~------------~~~~~~~~~~y~apE~~~-~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~~ 221 (267)
T cd08224 158 SKTT------------AAHSLVGTPYYMSPERIH-ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM---NLYSLCKKIE 221 (267)
T ss_pred CCCc------------ccceecCCccccCHHHhc-cCCCCchhcHHHHHHHHHHHHHCCCCcccCCc---cHHHHHhhhh
Confidence 2210 011234677899999854 46789999999999999999999999864332 2233332222
Q ss_pred hccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhhh
Q 006522 585 RERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 640 (642)
Q Consensus 585 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l~ 640 (642)
....+ .... ......+.+++.+||+.+|++||++.+|+++|++++
T Consensus 222 ~~~~~--~~~~---------~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 222 KCDYP--PLPA---------DHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred cCCCC--CCCh---------hhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 21111 1000 011224567888999999999999999999999875
No 188
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=1e-36 Score=310.10 Aligned_cols=249 Identities=23% Similarity=0.246 Sum_probs=191.7
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCc--cccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA--TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 424 (642)
...||+|+||.||++.....+ +.||+|.+..... ....+.+.+|++++++++|+||+++++++..++..++||
T Consensus 5 ~~~lg~G~~g~vy~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~ 79 (285)
T cd05632 5 YRVLGKGGFGEVCACQVRATG-----KMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVL 79 (285)
T ss_pred EEEEecCCCeEEEEEEECCCC-----cEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEE
Confidence 357999999999999987765 8999999865421 112255788999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCC
Q 006522 425 DFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLP 504 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 504 (642)
||+++|+|.+++..... ..+++..+..++.|++.||.|||+ .+|+||||||+||++++++.+||+|||++....
T Consensus 80 e~~~~~~L~~~~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~---~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~ 153 (285)
T cd05632 80 TIMNGGDLKFHIYNMGN---PGFEEERALFYAAEILCGLEDLHR---ENTVYRDLKPENILLDDYGHIRISDLGLAVKIP 153 (285)
T ss_pred EeccCccHHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCCHHHEEECCCCCEEEecCCcceecC
Confidence 99999999998875432 249999999999999999999999 899999999999999999999999999987543
Q ss_pred CCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHH
Q 006522 505 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAF 584 (642)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~ 584 (642)
... ......|+..|+|||++. +..++.++|||||||++|||+||+.||...... .....+.....
T Consensus 154 ~~~-------------~~~~~~g~~~~~aPE~~~-~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~-~~~~~~~~~~~ 218 (285)
T cd05632 154 EGE-------------SIRGRVGTVGYMAPEVLN-NQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEK-VKREEVDRRVL 218 (285)
T ss_pred CCC-------------cccCCCCCcCccChHHhc-CCCCCcccchHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhhh
Confidence 221 011346788999999854 467899999999999999999999999753221 11111111111
Q ss_pred hccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCC-----HHHHHH
Q 006522 585 RERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPR-----MRTVSE 634 (642)
Q Consensus 585 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs-----~~ev~~ 634 (642)
.........++ ..+.+++.+|++.||++||+ +.|+++
T Consensus 219 ~~~~~~~~~~~-------------~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05632 219 ETEEVYSAKFS-------------EEAKSICKMLLTKDPKQRLGCQEEGAGEVKR 260 (285)
T ss_pred ccccccCccCC-------------HHHHHHHHHHccCCHhHcCCCcccChHHHHc
Confidence 11111111111 23456888999999999999 556554
No 189
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=1.6e-36 Score=306.15 Aligned_cols=256 Identities=21% Similarity=0.352 Sum_probs=197.7
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEe
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
....||+|+||.||+|...... +....|++|...........+.|.+|+.++++++||||+++++++.. +..++|||
T Consensus 10 ~~~~lg~g~~g~v~~~~~~~~~--~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv~e 86 (270)
T cd05056 10 LGRCIGEGQFGDVYQGVYMSPE--NEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIVME 86 (270)
T ss_pred eeeeeCCccceeEEEEEEecCC--CCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEEEE
Confidence 3578999999999999875542 22257999988765434444789999999999999999999998875 56789999
Q ss_pred eccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCC
Q 006522 426 FIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPG 505 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 505 (642)
|+++|+|.+++..... .+++..+..++.|++.||+|||+ .+++||||||+||+++.++.+|++|||+++....
T Consensus 87 ~~~~~~L~~~l~~~~~----~~~~~~~~~~~~~l~~~l~~lH~---~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~ 159 (270)
T cd05056 87 LAPLGELRSYLQVNKY----SLDLASLILYSYQLSTALAYLES---KRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLED 159 (270)
T ss_pred cCCCCcHHHHHHhCCC----CCCHHHHHHHHHHHHHHHHHHHh---CCeeccccChheEEEecCCCeEEccCceeeeccc
Confidence 9999999999976432 48999999999999999999999 8999999999999999999999999999876543
Q ss_pred CCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHHH
Q 006522 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAF 584 (642)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~~l~~~~~~~~ 584 (642)
..... .....++..|+|||.+. ...++.++|||||||++||+++ |+.||...... .......
T Consensus 160 ~~~~~-----------~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~-----~~~~~~~ 222 (270)
T cd05056 160 ESYYK-----------ASKGKLPIKWMAPESIN-FRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNN-----DVIGRIE 222 (270)
T ss_pred cccee-----------cCCCCccccccChhhhc-cCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHH-----HHHHHHH
Confidence 31110 00123445799999854 4678999999999999999996 99999754321 1111111
Q ss_pred hc-cCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhhhc
Q 006522 585 RE-RRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 641 (642)
Q Consensus 585 ~~-~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l~~ 641 (642)
.. ..+....++ ..+.+++.+|+..+|++|||+.++++.|++++.
T Consensus 223 ~~~~~~~~~~~~-------------~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~ 267 (270)
T cd05056 223 NGERLPMPPNCP-------------PTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQ 267 (270)
T ss_pred cCCcCCCCCCCC-------------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 11 111112122 235568888999999999999999999999864
No 190
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=7.3e-37 Score=341.03 Aligned_cols=269 Identities=20% Similarity=0.221 Sum_probs=197.1
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCc--cccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA--TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 424 (642)
.+.||+|+||.||+|+....+ +.||+|++..... ....++|.+|++++++++||||+++++++...+..++||
T Consensus 7 i~~LGkGgfG~VYlA~d~~tg-----~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 7 IRLIGKGGMGEVYLAYDPVCS-----RRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred EEEEecCCCEEEEEEEECCCC-----cEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 467999999999999987764 8999999975422 222367999999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhcCCCC------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEeccc
Q 006522 425 DFIRNGSLYAALHAGPSD------SLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFG 498 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfG 498 (642)
||+++|+|.+++...... ....+++..++.++.||++||+|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs---~GIIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHS---KGVLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHH---CCccccCCchheEEEcCCCCEEEEecC
Confidence 999999999998642110 11346788899999999999999999 899999999999999999999999999
Q ss_pred ccccCCCCCcccccce------eeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCC
Q 006522 499 LNRLLPGTSKVTKNET------IVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEND 572 (642)
Q Consensus 499 la~~~~~~~~~~~~~~------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~ 572 (642)
+++............. ............||+.|||||+.. +..++.++|||||||++|||+||+.||......
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~-g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ 237 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLL-GVPASESTDIYALGVILYQMLTLSFPYRRKKGR 237 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhc-CCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchh
Confidence 9987632111000000 000001112356999999999854 467899999999999999999999999752221
Q ss_pred cccHHHHHHHHHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCC-CHHHHHHHHHhh
Q 006522 573 GKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRP-RMRTVSESLDRV 639 (642)
Q Consensus 573 ~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-s~~ev~~~L~~l 639 (642)
. . .......... ...+. ......+.+++.+|++.||++|| +++++.+.|+..
T Consensus 238 k--i--~~~~~i~~P~----~~~p~-------~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~ 290 (932)
T PRK13184 238 K--I--SYRDVILSPI----EVAPY-------REIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPH 290 (932)
T ss_pred h--h--hhhhhccChh----hcccc-------ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 1 1 0111110000 00000 00112345688899999999996 677787877765
No 191
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=1.5e-37 Score=323.00 Aligned_cols=237 Identities=21% Similarity=0.309 Sum_probs=184.1
Q ss_pred cCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC--ccccHHHHHHHHHHHhcc---cCCCeeeEEEEEEeCCceEEEE
Q 006522 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARV---QHPNIVRLKAFYYANDEKLLIS 424 (642)
Q Consensus 350 lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l---~H~nIv~l~~~~~~~~~~~lv~ 424 (642)
||+|+||.||+++....+ +.||||++.... .......+..|..++.+. +||||+++++++...+..++||
T Consensus 1 lG~G~~g~Vy~~~~~~~~-----~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~ 75 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTR-----RIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVT 75 (330)
T ss_pred CCCCCceEEEEEEECCCC-----CEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEE
Confidence 699999999999987765 899999986531 112224556677777665 6999999999999999999999
Q ss_pred eeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCC
Q 006522 425 DFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLP 504 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 504 (642)
||+++|+|.+++.... .+++..+..++.||++||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 76 e~~~~g~L~~~l~~~~-----~~~~~~~~~~~~qil~al~~LH~---~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~ 147 (330)
T cd05586 76 DYMSGGELFWHLQKEG-----RFSEDRAKFYIAELVLALEHLHK---YDIVYRDLKPENILLDATGHIALCDFGLSKANL 147 (330)
T ss_pred cCCCCChHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEecCCcCcCCC
Confidence 9999999999987543 38999999999999999999999 899999999999999999999999999987532
Q ss_pred CCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHH
Q 006522 505 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAF 584 (642)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~ 584 (642)
.... ......||..|+|||++.....++.++||||+||++|||+||+.||.... .....+...
T Consensus 148 ~~~~------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~-----~~~~~~~i~ 210 (330)
T cd05586 148 TDNK------------TTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAED-----TQQMYRNIA 210 (330)
T ss_pred CCCC------------CccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCC-----HHHHHHHHH
Confidence 2110 11234688999999986554568999999999999999999999997532 223333333
Q ss_pred hccCCCcc-ccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCH
Q 006522 585 RERRPLSE-VIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRM 629 (642)
Q Consensus 585 ~~~~~~~~-~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~ 629 (642)
.....++. .+++ .+.+++.+||+.||++||++
T Consensus 211 ~~~~~~~~~~~~~-------------~~~~li~~~L~~~P~~R~~~ 243 (330)
T cd05586 211 FGKVRFPKNVLSD-------------EGRQFVKGLLNRNPQHRLGA 243 (330)
T ss_pred cCCCCCCCccCCH-------------HHHHHHHHHcCCCHHHCCCC
Confidence 22222111 1222 23457888999999999954
No 192
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=1.7e-36 Score=311.31 Aligned_cols=259 Identities=25% Similarity=0.438 Sum_probs=197.0
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEe
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
....||+|+||.||++....++. .....||+|.+..........++.+|+.++++++||||+++++++... ..++++|
T Consensus 11 ~~~~lg~G~~g~vy~~~~~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~v~e 88 (303)
T cd05110 11 RVKVLGSGAFGTVYKGIWVPEGE-TVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQLVTQ 88 (303)
T ss_pred eccccccCCCccEEEEEEecCCC-cceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cceeeeh
Confidence 34679999999999998765532 122468999887654433345789999999999999999999998764 4679999
Q ss_pred eccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCC
Q 006522 426 FIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPG 505 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 505 (642)
|+++|+|.+++..... .+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++....
T Consensus 89 ~~~~g~l~~~~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~ 161 (303)
T cd05110 89 LMPHGCLLDYVHEHKD----NIGSQLLLNWCVQIAKGMMYLEE---RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEG 161 (303)
T ss_pred hcCCCCHHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHhh---cCeeccccccceeeecCCCceEEccccccccccC
Confidence 9999999999976542 48999999999999999999999 8999999999999999999999999999986643
Q ss_pred CCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHHH
Q 006522 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAF 584 (642)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~~l~~~~~~~~ 584 (642)
..... ......++..|+|||++. +..++.++|||||||++|||+| |+.||.+... .....++...
T Consensus 162 ~~~~~----------~~~~~~~~~~y~~PE~~~-~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~--~~~~~~~~~~- 227 (303)
T cd05110 162 DEKEY----------NADGGKMPIKWMALECIH-YRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT--REIPDLLEKG- 227 (303)
T ss_pred ccccc----------ccCCCccccccCCHHHhc-cCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHHCC-
Confidence 21110 011223466799999854 4778999999999999999998 9999864321 1122222110
Q ss_pred hccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhhhc
Q 006522 585 RERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 641 (642)
Q Consensus 585 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l~~ 641 (642)
...+..... ...+.+++..||..+|++||++.|+++.|+++.+
T Consensus 228 -~~~~~~~~~-------------~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~ 270 (303)
T cd05110 228 -ERLPQPPIC-------------TIDVYMVMVKCWMIDADSRPKFKELAAEFSRMAR 270 (303)
T ss_pred -CCCCCCCCC-------------CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 111111111 1245678899999999999999999999998753
No 193
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=1.9e-36 Score=303.02 Aligned_cols=244 Identities=23% Similarity=0.395 Sum_probs=191.3
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEe-CCceEEEE
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYA-NDEKLLIS 424 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~-~~~~~lv~ 424 (642)
....||+|+||.||++.... ..|++|.++.... .+.|.+|+.++++++|+||+++++++.. .+..++||
T Consensus 10 ~~~~lg~g~~~~v~~~~~~~-------~~~~~k~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~ 79 (256)
T cd05082 10 LLQTIGKGEFGDVMLGDYRG-------NKVAVKCIKNDAT---AQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 79 (256)
T ss_pred eeeeecccCCCeEEEEEEcC-------CcEEEEEeCCCch---HHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEE
Confidence 35789999999999997653 6789998865322 3678999999999999999999998654 45789999
Q ss_pred eeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCC
Q 006522 425 DFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLP 504 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 504 (642)
||+++|+|.++++.... ..+++..+..++.|++.||+|||+ .+++||||||+||++++++.+|++|||+++...
T Consensus 80 e~~~~~~L~~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~ 153 (256)
T cd05082 80 EYMAKGSLVDYLRSRGR---SVLGGDCLLKFSLDVCEAMEYLEA---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 153 (256)
T ss_pred ECCCCCcHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHh---CCEeccccchheEEEcCCCcEEecCCccceecc
Confidence 99999999999976543 248999999999999999999999 899999999999999999999999999987543
Q ss_pred CCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHH
Q 006522 505 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKA 583 (642)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~~l~~~~~~~ 583 (642)
... ....++..|+|||+.. +..++.++|||||||++|||++ |+.||... .........
T Consensus 154 ~~~---------------~~~~~~~~y~aPE~~~-~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~-----~~~~~~~~~ 212 (256)
T cd05082 154 STQ---------------DTGKLPVKWTAPEALR-EKKFSTKSDVWSFGILLWEIYSFGRVPYPRI-----PLKDVVPRV 212 (256)
T ss_pred ccC---------------CCCccceeecCHHHHc-cCCCCchhhhHHHHHHHHHHHhCCCCCCCCC-----CHHHHHHHH
Confidence 211 0123345699999854 4678999999999999999998 99998642 222333222
Q ss_pred HhccC-CCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhh
Q 006522 584 FRERR-PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 639 (642)
Q Consensus 584 ~~~~~-~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l 639 (642)
..... ...+.++ ..+.+++.+||+.+|++|||+.++++.|+.+
T Consensus 213 ~~~~~~~~~~~~~-------------~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 213 EKGYKMDAPDGCP-------------PVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred hcCCCCCCCCCCC-------------HHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 22111 1111111 2345688899999999999999999999864
No 194
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=9.4e-37 Score=315.40 Aligned_cols=246 Identities=20% Similarity=0.277 Sum_probs=199.1
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCcc--ccHHHHHHHHHHHhccc-CCCeeeEEEEEEeCCceEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT--WRFKDFESEVEAIARVQ-HPNIVRLKAFYYANDEKLLI 423 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lv 423 (642)
...||+|.||.||++....++ +.+|+|.+.+.... ...+.+.+|+.+|+++. |||||.+++.|.+.+..++|
T Consensus 40 ~~~lG~G~Fg~v~~~~~~~tg-----~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lv 114 (382)
T KOG0032|consen 40 GRELGRGQFGVVYLCREKSTG-----KEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLV 114 (382)
T ss_pred hhhhCCCCceEEEEEEecCCC-----ceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEE
Confidence 478999999999999998865 89999999876332 23468999999999998 99999999999999999999
Q ss_pred EeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCC----CCCeEEecccc
Q 006522 424 SDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDD----ELHPCISGFGL 499 (642)
Q Consensus 424 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~----~~~~kl~DfGl 499 (642)
||++.||.|++.+... .+++.....++.|++.|+.|||+ .+|+||||||+|+|+.. ++.+|++|||+
T Consensus 115 mEL~~GGeLfd~i~~~------~~sE~da~~~~~~il~av~~lH~---~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGl 185 (382)
T KOG0032|consen 115 MELCEGGELFDRIVKK------HYSERDAAGIIRQILEAVKYLHS---LGVVHRDLKPENLLLASKDEGSGRIKLIDFGL 185 (382)
T ss_pred EEecCCchHHHHHHHc------cCCHHHHHHHHHHHHHHHHHHHh---CCceeccCCHHHeeeccccCCCCcEEEeeCCC
Confidence 9999999999999875 18999999999999999999999 89999999999999953 35799999999
Q ss_pred cccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHH
Q 006522 500 NRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESL 579 (642)
Q Consensus 500 a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~ 579 (642)
+....... .....+||+.|+|||+.. ...|+..+||||.||++|.|++|..||.+......
T Consensus 186 a~~~~~~~-------------~~~~~~Gtp~y~APEvl~-~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~----- 246 (382)
T KOG0032|consen 186 AKFIKPGE-------------RLHTIVGTPEYVAPEVLG-GRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEI----- 246 (382)
T ss_pred ceEccCCc-------------eEeeecCCccccCchhhc-CCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHH-----
Confidence 98765421 122568999999999944 37899999999999999999999999987544322
Q ss_pred HHHHHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 580 VRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 580 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
..........+.....+.+ ...+-+++..++..||.+|+|+.++++
T Consensus 247 ~~~i~~~~~~f~~~~w~~i---------s~~akd~i~~ll~~dp~~R~ta~~~L~ 292 (382)
T KOG0032|consen 247 FLAILRGDFDFTSEPWDDI---------SESAKDFIRKLLEFDPRKRLTAAQALQ 292 (382)
T ss_pred HHHHHcCCCCCCCCCcccc---------CHHHHHHHHHhcccCcccCCCHHHHhc
Confidence 1133333222111111111 123445888899999999999999986
No 195
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=2.4e-37 Score=327.40 Aligned_cols=209 Identities=21% Similarity=0.285 Sum_probs=168.6
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC--ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 424 (642)
...||+|+||.||++.....+ +.||||.+.+.. .....+.+.+|++++++++||||+++++.+...+..++||
T Consensus 6 ~~~lG~G~~g~V~~a~~~~~~-----~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 6 IKTIGIGAFGEVCLVRKVDTN-----ALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred EEEEEeCCCeEEEEEEECCCC-----CEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 467999999999999987764 899999986532 1223367889999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCC
Q 006522 425 DFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLP 504 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 504 (642)
||+++|+|.+++...+ .+++.....++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||++..+.
T Consensus 81 E~~~~g~L~~~i~~~~-----~~~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~ 152 (376)
T cd05598 81 DYIPGGDMMSLLIRLG-----IFEEDLARFYIAELTCAIESVHK---MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFR 152 (376)
T ss_pred eCCCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHEEECCCCCEEEEeCCCCcccc
Confidence 9999999999997643 38889999999999999999999 899999999999999999999999999986432
Q ss_pred CCCccc---c-----cc-----------------------eeeecCCCcccccCCCcccCccccccCCCCCcccchHHHH
Q 006522 505 GTSKVT---K-----NE-----------------------TIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFG 553 (642)
Q Consensus 505 ~~~~~~---~-----~~-----------------------~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~G 553 (642)
...... . .. .............||+.|||||++. +..++.++||||||
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwSlG 231 (376)
T cd05598 153 WTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLL-RTGYTQLCDWWSVG 231 (376)
T ss_pred ccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHc-CCCCCcceeeeecc
Confidence 110000 0 00 0000000112357999999999854 47789999999999
Q ss_pred HHHHHHHhCCCCCCCC
Q 006522 554 IVLLEILTGRLPDAGP 569 (642)
Q Consensus 554 vvl~el~tG~~P~~~~ 569 (642)
|++|||+||+.||...
T Consensus 232 vilyell~G~~Pf~~~ 247 (376)
T cd05598 232 VILYEMLVGQPPFLAD 247 (376)
T ss_pred ceeeehhhCCCCCCCC
Confidence 9999999999999753
No 196
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=2.1e-36 Score=303.28 Aligned_cols=256 Identities=29% Similarity=0.435 Sum_probs=200.3
Q ss_pred cccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEeec
Q 006522 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFI 427 (642)
Q Consensus 348 ~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~ 427 (642)
+.||+|+||.||++...... .....|++|.+.........+.+.+|++++++++|+||+++++++......++||||+
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~--~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 78 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKD--GKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYM 78 (262)
T ss_pred CccccCCceEEEEEEEecCC--CCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEec
Confidence 36899999999999987641 1127899999987644334578999999999999999999999999999999999999
Q ss_pred cCCcHHHHHhcCCCC----CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccC
Q 006522 428 RNGSLYAALHAGPSD----SLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLL 503 (642)
Q Consensus 428 ~~gsL~~~l~~~~~~----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 503 (642)
++++|.+++...... ....+++..+..++.|++.||+|||+ .+++||||||+||++++++.+||+|||.++..
T Consensus 79 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~di~p~nili~~~~~~~l~dfg~~~~~ 155 (262)
T cd00192 79 EGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLAS---KKFVHRDLAARNCLVGEDLVVKISDFGLSRDV 155 (262)
T ss_pred cCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHc---CCcccCccCcceEEECCCCcEEEccccccccc
Confidence 999999999875211 01359999999999999999999999 89999999999999999999999999999876
Q ss_pred CCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHH
Q 006522 504 PGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRK 582 (642)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~~l~~~~~~ 582 (642)
....... ......++..|+|||.+.. ..++.++||||+||++|||++ |+.||.... .......
T Consensus 156 ~~~~~~~----------~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~~g~~p~~~~~-----~~~~~~~ 219 (262)
T cd00192 156 YDDDYYR----------KKTGGKLPIRWMAPESLKD-GIFTSKSDVWSFGVLLWEIFTLGATPYPGLS-----NEEVLEY 219 (262)
T ss_pred ccccccc----------cccCCCcCccccCHHHhcc-CCcchhhccHHHHHHHHHHHhcCCCCCCCCC-----HHHHHHH
Confidence 5432100 0113346778999998554 578999999999999999999 699997542 1222222
Q ss_pred HHhcc-CCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHH
Q 006522 583 AFRER-RPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 637 (642)
Q Consensus 583 ~~~~~-~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~ 637 (642)
..... ......++ .++.+++.+||+.+|++|||+.|+++.|+
T Consensus 220 ~~~~~~~~~~~~~~-------------~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 220 LRKGYRLPKPEYCP-------------DELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred HHcCCCCCCCccCC-------------hHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 22211 11112222 24566888899999999999999998874
No 197
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=2.7e-36 Score=305.98 Aligned_cols=257 Identities=23% Similarity=0.369 Sum_probs=199.5
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEe
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
..+.||+|+||.||+|.....+ ......+|+|.+..........++.+|+.++++++||||+++++++.. ...++|||
T Consensus 11 ~~~~ig~g~~g~v~~~~~~~~~-~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e 88 (279)
T cd05057 11 KIKVLGSGAFGTVYKGVWIPEG-EKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQLITQ 88 (279)
T ss_pred EcceecCCCCccEEEEEEecCC-CCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEEEEe
Confidence 3578999999999999976542 222357999988765444444788999999999999999999999987 78899999
Q ss_pred eccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCC
Q 006522 426 FIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPG 505 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 505 (642)
|+++|+|.+++..... .+++..+..++.|++.||+|||+ .+++||||||+||++++++.+||+|||+++....
T Consensus 89 ~~~~g~L~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~LH~---~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~ 161 (279)
T cd05057 89 LMPLGCLLDYVRNHKD----NIGSQYLLNWCVQIAKGMSYLEE---KRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDV 161 (279)
T ss_pred cCCCCcHHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHh---CCEEecccCcceEEEcCCCeEEECCCcccccccC
Confidence 9999999999976543 38999999999999999999999 8999999999999999999999999999987643
Q ss_pred CCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHHH
Q 006522 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAF 584 (642)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~~l~~~~~~~~ 584 (642)
..... . .....++..|+|||... ...++.++|||||||++||++| |+.||..... ..+.....
T Consensus 162 ~~~~~-------~---~~~~~~~~~y~~PE~~~-~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-----~~~~~~~~ 225 (279)
T cd05057 162 DEKEY-------H---AEGGKVPIKWMALESIL-HRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPA-----VEIPDLLE 225 (279)
T ss_pred cccce-------e---cCCCcccccccCHHHhh-cCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCH-----HHHHHHHh
Confidence 21110 0 00122356799999854 4678999999999999999999 9999975321 22222222
Q ss_pred hcc-CCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhhh
Q 006522 585 RER-RPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 640 (642)
Q Consensus 585 ~~~-~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l~ 640 (642)
... .+.+...+ ..+.+++.+||..+|++||++.++++.|+++.
T Consensus 226 ~~~~~~~~~~~~-------------~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~ 269 (279)
T cd05057 226 KGERLPQPPICT-------------IDVYMVLVKCWMIDAESRPTFKELINEFSKMA 269 (279)
T ss_pred CCCCCCCCCCCC-------------HHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 111 11111112 23456888899999999999999999999873
No 198
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=1.3e-36 Score=304.68 Aligned_cols=244 Identities=23% Similarity=0.365 Sum_probs=189.3
Q ss_pred ccCccCCceeEEEEecCCCC-----CCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEE
Q 006522 349 VVGKSKNGIMYKVVVGRGSG-----MGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLI 423 (642)
Q Consensus 349 ~lg~g~~g~vy~~~~~~~~~-----~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 423 (642)
.||+|+||.||++....... ......+++|.+...... ...|.+|+.++++++||||+++++++.. +..++|
T Consensus 2 ~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~--~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv 78 (259)
T cd05037 2 HLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD--SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV 78 (259)
T ss_pred cccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh--HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence 68999999999999976531 222346888877654332 4789999999999999999999999988 788999
Q ss_pred EeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCC-------CeEEec
Q 006522 424 SDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDEL-------HPCISG 496 (642)
Q Consensus 424 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~-------~~kl~D 496 (642)
|||+++|+|.+++..... .+++..+..++.||+.||+|||+ .+|+||||||+||+++.++ .+||+|
T Consensus 79 ~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~D 151 (259)
T cd05037 79 EEYVKFGPLDVFLHREKN----NVSLHWKLDVAKQLASALHYLED---KKLVHGNVCGKNILVARYGLNEGYVPFIKLSD 151 (259)
T ss_pred EEcCCCCcHHHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHhh---CCeecccCccceEEEecCccccCCceeEEeCC
Confidence 999999999999986542 48999999999999999999999 8999999999999999887 799999
Q ss_pred ccccccCCCCCcccccceeeecCCCcccccCCCcccCccccccC-CCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcc
Q 006522 497 FGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYG-SKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGK 574 (642)
Q Consensus 497 fGla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~ 574 (642)
||+++..... ....++..|+|||++... ..++.++|||||||++|||++ |..||......
T Consensus 152 fg~a~~~~~~----------------~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~-- 213 (259)
T cd05037 152 PGIPITVLSR----------------EERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSS-- 213 (259)
T ss_pred CCcccccccc----------------cccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCch--
Confidence 9998764321 022345569999985543 368899999999999999999 57777643211
Q ss_pred cHHHHHHHHHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHH
Q 006522 575 GLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 637 (642)
Q Consensus 575 ~l~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~ 637 (642)
.+... +........ +. ...+.+++.+||..+|.+|||+.|+++.|+
T Consensus 214 ---~~~~~-~~~~~~~~~---~~----------~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 214 ---EKERF-YQDQHRLPM---PD----------CAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred ---hHHHH-HhcCCCCCC---CC----------chHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 11111 111111010 00 035667899999999999999999999874
No 199
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.9e-36 Score=310.22 Aligned_cols=263 Identities=23% Similarity=0.354 Sum_probs=199.4
Q ss_pred cccccCccCCceeEEEEecCCCC--CCCCeEEEEEEecCCCccccHHHHHHHHHHHhcc-cCCCeeeEEEEEEeCCceEE
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSG--MGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLL 422 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~l 422 (642)
..+.||+|+||.||++....... ......+|+|.++.........++.+|+++++++ +||||+++++++...+..++
T Consensus 16 ~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 95 (314)
T cd05099 16 LGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEGPLYV 95 (314)
T ss_pred eeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCCceEE
Confidence 45789999999999998643211 1223679999988654444456789999999999 69999999999999889999
Q ss_pred EEeeccCCcHHHHHhcCCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCC
Q 006522 423 ISDFIRNGSLYAALHAGPSD-----------SLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELH 491 (642)
Q Consensus 423 v~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~ 491 (642)
||||+++|+|.+++...... ....++|..+.+++.|++.||+|||+ .+++||||||+||++++++.
T Consensus 96 v~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~---~gi~H~dlkp~Nill~~~~~ 172 (314)
T cd05099 96 IVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLES---RRCIHRDLAARNVLVTEDNV 172 (314)
T ss_pred EEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHH---CCeeeccccceeEEEcCCCc
Confidence 99999999999999764321 12358999999999999999999999 89999999999999999999
Q ss_pred eEEecccccccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCC
Q 006522 492 PCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPE 570 (642)
Q Consensus 492 ~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~ 570 (642)
+||+|||+++......... ......++..|+|||++. +..++.++|||||||++|||+| |..||....
T Consensus 173 ~kL~Dfg~~~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~-~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~ 241 (314)
T cd05099 173 MKIADFGLARGVHDIDYYK----------KTSNGRLPVKWMAPEALF-DRVYTHQSDVWSFGILMWEIFTLGGSPYPGIP 241 (314)
T ss_pred EEEcccccccccccccccc----------ccccCCCCccccCHHHHc-cCCcCccchhhHHHHHHHHHHhCCCCCCCCCC
Confidence 9999999998654321100 000112345699999854 4678999999999999999999 899986422
Q ss_pred CCcccHHHHHHHHHhccC-CCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhhh
Q 006522 571 NDGKGLESLVRKAFRERR-PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 640 (642)
Q Consensus 571 ~~~~~l~~~~~~~~~~~~-~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l~ 640 (642)
............. .....+ ..++.+++.+||+.+|++||++.|+++.|+++.
T Consensus 242 -----~~~~~~~~~~~~~~~~~~~~-------------~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~ 294 (314)
T cd05099 242 -----VEELFKLLREGHRMDKPSNC-------------THELYMLMRECWHAVPTQRPTFKQLVEALDKVL 294 (314)
T ss_pred -----HHHHHHHHHcCCCCCCCCCC-------------CHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence 1222222221111 111111 124556889999999999999999999999875
No 200
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.3e-36 Score=298.45 Aligned_cols=258 Identities=22% Similarity=0.294 Sum_probs=202.9
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC--ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 424 (642)
-..||.|.-|+||.+.+.... ..+|+|++.+.. ......+...|-+||+.++||.+++||+.|+.+...++||
T Consensus 82 lk~LG~GdiG~VyL~~l~~t~-----~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~m 156 (459)
T KOG0610|consen 82 LKRLGCGDIGTVYLVELRGTN-----CLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVM 156 (459)
T ss_pred HHHcCCCCceeEEEEEecCCC-----ceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEE
Confidence 357999999999999998876 899999998762 2233467888999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCC
Q 006522 425 DFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLP 504 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 504 (642)
|||+||+|..+.+.+... .+++..+..++.+|+.||+|||- .|||.|||||+|||+-++|++.|+||-|+....
T Consensus 157 eyCpGGdL~~LrqkQp~~---~fse~~aRFYaAEvl~ALEYLHm---lGivYRDLKPENILvredGHIMLsDFDLS~~~~ 230 (459)
T KOG0610|consen 157 EYCPGGDLHSLRQKQPGK---RFSESAARFYAAEVLLALEYLHM---LGIVYRDLKPENILVREDGHIMLSDFDLSLRCP 230 (459)
T ss_pred ecCCCccHHHHHhhCCCC---ccchhhHHHHHHHHHHHHHHHHh---hceeeccCCcceeEEecCCcEEeeeccccccCC
Confidence 999999999999876553 59999999999999999999999 899999999999999999999999999887653
Q ss_pred CCCcccc---------------------------cce---------------e--eecCCCcccccCCCcccCccccccC
Q 006522 505 GTSKVTK---------------------------NET---------------I--VTSGTGSRISAISNVYLAPEARIYG 540 (642)
Q Consensus 505 ~~~~~~~---------------------------~~~---------------~--~~~~~~~~~~~gt~~y~aPE~~~~~ 540 (642)
....... ... . ...+..+...+||-.|.|||+ +.+
T Consensus 231 ~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEv-I~G 309 (459)
T KOG0610|consen 231 VSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEV-IRG 309 (459)
T ss_pred CCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCcccccccccccccccee-eec
Confidence 2111000 000 0 112233456789999999999 455
Q ss_pred CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCC
Q 006522 541 SKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTE 620 (642)
Q Consensus 541 ~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~ 620 (642)
...+.++|.|+|||++|||+.|+.||.+..+.. -+..+......+++.- .-...+-+|+.+.|.
T Consensus 310 ~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~-----Tl~NIv~~~l~Fp~~~-----------~vs~~akDLIr~LLv 373 (459)
T KOG0610|consen 310 EGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKE-----TLRNIVGQPLKFPEEP-----------EVSSAAKDLIRKLLV 373 (459)
T ss_pred CCCCchhhHHHHHHHHHHHHhCCCCcCCCCchh-----hHHHHhcCCCcCCCCC-----------cchhHHHHHHHHHhc
Confidence 889999999999999999999999998765532 2333333332222211 112345568899999
Q ss_pred CCCCCCCC----HHHH
Q 006522 621 LDPEFRPR----MRTV 632 (642)
Q Consensus 621 ~dP~~RPs----~~ev 632 (642)
+||++|.- +.||
T Consensus 374 KdP~kRlg~~rGA~eI 389 (459)
T KOG0610|consen 374 KDPSKRLGSKRGAAEI 389 (459)
T ss_pred cChhhhhccccchHHh
Confidence 99999987 5555
No 201
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=2.3e-36 Score=307.33 Aligned_cols=264 Identities=24% Similarity=0.367 Sum_probs=196.9
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeC--CceEEE
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN--DEKLLI 423 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~lv 423 (642)
....||+|+||.||.+..... +......||+|.++........+.+.+|++++++++||||+++++++... ...++|
T Consensus 8 ~~~~lg~g~~g~v~~~~~~~~-~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 86 (284)
T cd05079 8 RIRDLGEGHFGKVELCRYDPE-GDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLI 86 (284)
T ss_pred hceecCCCCceeEEEEEEccC-CCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceEEE
Confidence 346799999999999975421 11222789999987654444457899999999999999999999999875 568899
Q ss_pred EeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccC
Q 006522 424 SDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLL 503 (642)
Q Consensus 424 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 503 (642)
|||+++++|.+++..... .++|..+..++.|++.||+|||+ ++++||||||+||+++.++.+||+|||+++..
T Consensus 87 ~e~~~g~~L~~~l~~~~~----~~~~~~~~~i~~~i~~aL~~lH~---~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~ 159 (284)
T cd05079 87 MEFLPSGSLKEYLPRNKN----KINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFGLTKAI 159 (284)
T ss_pred EEccCCCCHHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHH---CCeeecccchheEEEcCCCCEEECCCcccccc
Confidence 999999999999975432 48999999999999999999999 89999999999999999999999999999865
Q ss_pred CCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCC----------Cc
Q 006522 504 PGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEN----------DG 573 (642)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~----------~~ 573 (642)
....... . ......++..|+|||+... ..++.++|||||||++|||+|++.|+..... ..
T Consensus 160 ~~~~~~~-------~--~~~~~~~~~~y~apE~~~~-~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~ 229 (284)
T cd05079 160 ETDKEYY-------T--VKDDLDSPVFWYAPECLIQ-SKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQ 229 (284)
T ss_pred ccCccce-------e--ecCCCCCCccccCHHHhcc-CCCCccccchhhhhhhhhhhcCCCCCccccchhhhhccccccc
Confidence 4321110 0 0112345667999998554 6789999999999999999998876532211 00
Q ss_pred ccHHHHHHHHHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhh
Q 006522 574 KGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 639 (642)
Q Consensus 574 ~~l~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l 639 (642)
......+... ....... . . . .....+.+++.+||+.+|++||++.|+++.|+.+
T Consensus 230 ~~~~~~~~~~-~~~~~~~-~-~----~-----~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 230 MTVTRLVRVL-EEGKRLP-R-P----P-----NCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred ccHHHHHHHH-HcCccCC-C-C----C-----CCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 1111111111 1111100 0 0 0 0123567799999999999999999999999875
No 202
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=1.2e-36 Score=309.51 Aligned_cols=248 Identities=22% Similarity=0.241 Sum_probs=192.6
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCc--cccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA--TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 424 (642)
...||+|+||.||++.....+ +.||||.+..... ....+.+.+|+.++++++|+||+++++.+...+..++||
T Consensus 5 ~~~ig~G~~g~v~~~~~~~~~-----~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~ 79 (285)
T cd05630 5 YRVLGKGGFGEVCACQVRATG-----KMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVL 79 (285)
T ss_pred eEEeecCCCeEEEEEEEcCCC-----ceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEE
Confidence 357999999999999988765 8999999875422 122256788999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCC
Q 006522 425 DFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLP 504 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 504 (642)
||+++|+|.+++..... ..+++..+..++.|++.||.|||+ .+|+||||||+||++++++.++|+|||++....
T Consensus 80 e~~~g~~L~~~l~~~~~---~~l~~~~~~~~~~qi~~~l~~lH~---~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~ 153 (285)
T cd05630 80 TLMNGGDLKFHIYHMGE---AGFEEGRAVFYAAEICCGLEDLHQ---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVP 153 (285)
T ss_pred EecCCCcHHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHEEECCCCCEEEeeccceeecC
Confidence 99999999999865433 248999999999999999999999 899999999999999999999999999987543
Q ss_pred CCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHH
Q 006522 505 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAF 584 (642)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~ 584 (642)
.... .....|+..|+|||++.. ..++.++|||||||++|||++|+.||....... .........
T Consensus 154 ~~~~-------------~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~--~~~~~~~~~ 217 (285)
T cd05630 154 EGQT-------------IKGRVGTVGYMAPEVVKN-ERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI--KREEVERLV 217 (285)
T ss_pred CCcc-------------ccCCCCCccccChHHHcC-CCCCCccccHHHHHHHHHHHhCCCCCCCCCccc--hHHHHHhhh
Confidence 2210 112367889999999554 678999999999999999999999997533211 011111111
Q ss_pred hc-cCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCC-----HHHHHH
Q 006522 585 RE-RRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPR-----MRTVSE 634 (642)
Q Consensus 585 ~~-~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs-----~~ev~~ 634 (642)
.. .......+++ .+.+++..||+.||++||| +.|+++
T Consensus 218 ~~~~~~~~~~~~~-------------~~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 218 KEVQEEYSEKFSP-------------DARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred hhhhhhcCccCCH-------------HHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 10 1111122222 3456888899999999999 778875
No 203
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=2.7e-36 Score=302.64 Aligned_cols=247 Identities=28% Similarity=0.447 Sum_probs=193.7
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
...||+|+||.||+|....+ +.||+|.+...... .++|.+|+.++++++||||+++++++. .+..++||||
T Consensus 11 ~~~ig~G~~g~v~~~~~~~~------~~~a~K~~~~~~~~--~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~ 81 (260)
T cd05067 11 VKKLGAGQFGEVWMGYYNGH------TKVAIKSLKQGSMS--PEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEY 81 (260)
T ss_pred eeeeccCccceEEeeecCCC------ceEEEEEecCCCCc--HHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEc
Confidence 46799999999999997765 78999998764432 378999999999999999999999864 5678999999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCC
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 506 (642)
+++|+|.+++..... ..+++.++..++.|++.||+|||+ .+++||||||+||++++++.++|+|||++......
T Consensus 82 ~~~~~L~~~~~~~~~---~~~~~~~~~~i~~~i~~al~~LH~---~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~ 155 (260)
T cd05067 82 MENGSLVDFLKTPEG---IKLTINKLIDMAAQIAEGMAFIER---KNYIHRDLRAANILVSETLCCKIADFGLARLIEDN 155 (260)
T ss_pred CCCCCHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHhc---CCeecccccHHhEEEcCCCCEEEccCcceeecCCC
Confidence 999999999876443 248999999999999999999998 89999999999999999999999999998765422
Q ss_pred CcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHHHh
Q 006522 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFR 585 (642)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~~l~~~~~~~~~ 585 (642)
... ......++..|+|||++. ...++.++|||||||++||++| |+.||..... .........
T Consensus 156 ~~~-----------~~~~~~~~~~y~~pe~~~-~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-----~~~~~~~~~ 218 (260)
T cd05067 156 EYT-----------AREGAKFPIKWTAPEAIN-YGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTN-----PEVIQNLER 218 (260)
T ss_pred Ccc-----------cccCCcccccccCHHHhc-cCCcCcccchHHHHHHHHHHHhCCCCCCCCCCh-----HHHHHHHHc
Confidence 110 001223456799999854 4678899999999999999999 9999975321 122222211
Q ss_pred cc-CCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHh
Q 006522 586 ER-RPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 638 (642)
Q Consensus 586 ~~-~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 638 (642)
.. .+..... ..++.+++.+||+.+|++||+++++.+.|+.
T Consensus 219 ~~~~~~~~~~-------------~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 219 GYRMPRPDNC-------------PEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred CCCCCCCCCC-------------CHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 11 1111111 1246678899999999999999999999875
No 204
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=1.3e-36 Score=306.44 Aligned_cols=259 Identities=26% Similarity=0.436 Sum_probs=196.0
Q ss_pred cccCccCCceeEEEEecCCCC-CCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 348 YVVGKSKNGIMYKVVVGRGSG-MGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 348 ~~lg~g~~g~vy~~~~~~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
+.||+|+||.||+|....... ......+++|.+...........|.+|++++++++||||+++++++...+..++||||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 368999999999998765321 1223679999887654333447899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcCCCC--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCC-----CeEEecccc
Q 006522 427 IRNGSLYAALHAGPSD--SLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDEL-----HPCISGFGL 499 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~-----~~kl~DfGl 499 (642)
+++|+|.++++..... ....++|.++..++.|++.||+|||+ .+++|+||||+||+++.+. .+|++|||+
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~ 157 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQ---MHFIHRDLAARNCLVSEKGYDADRVVKIGDFGL 157 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHh---CCcccCCCChheEEEecCCCCCCcceEECCccc
Confidence 9999999999754321 12348999999999999999999998 8999999999999999877 899999999
Q ss_pred cccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHH
Q 006522 500 NRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLES 578 (642)
Q Consensus 500 a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~~l~~ 578 (642)
++.......... .....++..|+|||++. +..++.++|||||||++|||+| |+.||..... ..
T Consensus 158 ~~~~~~~~~~~~----------~~~~~~~~~y~aPE~~~-~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~-----~~ 221 (269)
T cd05044 158 ARDIYKSDYYRK----------EGEGLLPVRWMAPESLL-DGKFTTQSDVWSFGVLMWEILTLGQQPYPALNN-----QE 221 (269)
T ss_pred cccccccccccc----------CcccCCCccccCHHHHc-cCCcccchhHHHHHHHHHHHHHcCCCCCcccCH-----HH
Confidence 876543211100 00223456799999854 4678999999999999999998 9999864321 11
Q ss_pred HHHHHHhccC-CCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHh
Q 006522 579 LVRKAFRERR-PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 638 (642)
Q Consensus 579 ~~~~~~~~~~-~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 638 (642)
.......... .....+ ...+.+++.+||+.+|++||++.++++.|++
T Consensus 222 ~~~~~~~~~~~~~~~~~-------------~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 222 VLQHVTAGGRLQKPENC-------------PDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred HHHHHhcCCccCCcccc-------------hHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 2221111111 111111 1245678899999999999999999999864
No 205
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=7.9e-37 Score=321.93 Aligned_cols=251 Identities=18% Similarity=0.213 Sum_probs=188.9
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC--ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEE
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLI 423 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 423 (642)
....||+|+||.||++....++ +.+|+|.+.... .....+.+.+|+.+++.++||||+++++++...+..++|
T Consensus 47 i~~~lG~G~fg~Vy~~~~~~~~-----~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv 121 (371)
T cd05622 47 VVKVIGRGAFGEVQLVRHKSTR-----KVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMV 121 (371)
T ss_pred EEEEEeecCCeEEEEEEECCCC-----cEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 3578999999999999988775 899999986431 122235678999999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccC
Q 006522 424 SDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLL 503 (642)
Q Consensus 424 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 503 (642)
|||+++|+|.+++... .+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 122 ~Ey~~gg~L~~~~~~~------~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~ 192 (371)
T cd05622 122 MEYMPGGDLVNLMSNY------DVPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKM 192 (371)
T ss_pred EcCCCCCcHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHHH---CCEEeCCCCHHHEEECCCCCEEEEeCCceeEc
Confidence 9999999999998653 27888899999999999999999 89999999999999999999999999999865
Q ss_pred CCCCcccccceeeecCCCcccccCCCcccCccccccC---CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHH
Q 006522 504 PGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYG---SKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLV 580 (642)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~ 580 (642)
...... ......||+.|+|||++... ..++.++|||||||++|||++|+.||.... .....
T Consensus 193 ~~~~~~-----------~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~-----~~~~~ 256 (371)
T cd05622 193 NKEGMV-----------RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS-----LVGTY 256 (371)
T ss_pred CcCCcc-----------cccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCC-----HHHHH
Confidence 432110 11235689999999985432 237899999999999999999999997532 22233
Q ss_pred HHHHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCC--CCCHHHHHHH
Q 006522 581 RKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEF--RPRMRTVSES 635 (642)
Q Consensus 581 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~--RPs~~ev~~~ 635 (642)
...........-...+.+ ...+.+++..|+..++.+ ||++.|+++.
T Consensus 257 ~~i~~~~~~~~~~~~~~~---------s~~~~~li~~~L~~~~~r~~r~~~~ei~~h 304 (371)
T cd05622 257 SKIMNHKNSLTFPDDNDI---------SKEAKNLICAFLTDREVRLGRNGVEEIKRH 304 (371)
T ss_pred HHHHcCCCcccCCCcCCC---------CHHHHHHHHHHcCChhhhcCCCCHHHHhcC
Confidence 333322111100000111 112345777788743332 6788888763
No 206
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=3.5e-36 Score=301.10 Aligned_cols=247 Identities=22% Similarity=0.387 Sum_probs=194.1
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
...||+|+||.||++....+ ..+|+|.+...... ..+|.+|++++++++||||+++++++......++||||
T Consensus 9 ~~~ig~g~~g~v~~~~~~~~------~~~~~k~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd05112 9 VQEIGSGQFGLVWLGYWLEK------RKVAIKTIREGAMS--EEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEF 80 (256)
T ss_pred EeeecCcccceEEEEEEeCC------CeEEEEECCCCCCC--HHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEc
Confidence 46799999999999988655 67999998754332 26789999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCC
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 506 (642)
+++|+|.+++..... .+++..+..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||+++.....
T Consensus 81 ~~~~~L~~~~~~~~~----~~~~~~~~~~~~~l~~~l~~lH~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~ 153 (256)
T cd05112 81 MEHGCLSDYLRAQRG----KFSQETLLGMCLDVCEGMAYLES---SNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDD 153 (256)
T ss_pred CCCCcHHHHHHhCcc----CCCHHHHHHHHHHHHHHHHHHHH---CCccccccccceEEEcCCCeEEECCCcceeecccC
Confidence 999999999976442 48899999999999999999999 79999999999999999999999999998765322
Q ss_pred CcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHHHh
Q 006522 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFR 585 (642)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~~l~~~~~~~~~ 585 (642)
... ......++..|+|||... +..++.++|||||||++|||++ |+.||..... .........
T Consensus 154 ~~~-----------~~~~~~~~~~~~aPe~~~-~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-----~~~~~~~~~ 216 (256)
T cd05112 154 QYT-----------SSTGTKFPVKWSSPEVFS-FSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSN-----SEVVETINA 216 (256)
T ss_pred ccc-----------ccCCCccchhhcCHhHhc-cCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCH-----HHHHHHHhC
Confidence 100 001123456799999854 4678999999999999999998 9999864221 222222211
Q ss_pred ccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHH
Q 006522 586 ERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 637 (642)
Q Consensus 586 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~ 637 (642)
.... ..+.. ....+.+++.+||+.+|++||++.|+++.|.
T Consensus 217 ~~~~----~~~~~--------~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 217 GFRL----YKPRL--------ASQSVYELMQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred CCCC----CCCCC--------CCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence 1111 11111 1134677999999999999999999998873
No 207
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=2.4e-36 Score=307.03 Aligned_cols=264 Identities=24% Similarity=0.346 Sum_probs=199.6
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEe--CCceEEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYA--NDEKLLIS 424 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~--~~~~~lv~ 424 (642)
...||+|+||.||++...... ....+.+|||.+.........+.|.+|++++++++||||+++++++.. ....++||
T Consensus 9 ~~~ig~g~~~~v~~~~~~~~~-~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 87 (284)
T cd05038 9 IKQLGEGHFGKVELCRYDPLG-DNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLRLIM 87 (284)
T ss_pred heeeccCCCeeEEEeeecCCC-CCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceEEEE
Confidence 367999999999999875431 112278999999865443234789999999999999999999999987 55789999
Q ss_pred eeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCC
Q 006522 425 DFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLP 504 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 504 (642)
||+++++|.+++..... .++|..+..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++....
T Consensus 88 e~~~~~~l~~~l~~~~~----~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 160 (284)
T cd05038 88 EYLPSGSLRDYLQRHRD----QINLKRLLLFSSQICKGMDYLGS---QRYIHRDLAARNILVESEDLVKISDFGLAKVLP 160 (284)
T ss_pred ecCCCCCHHHHHHhCcc----ccCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHhEEEcCCCCEEEcccccccccc
Confidence 99999999999976542 48999999999999999999999 899999999999999999999999999998765
Q ss_pred CCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcc----------
Q 006522 505 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGK---------- 574 (642)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~---------- 574 (642)
....... ......++..|+|||.... ..++.++||||||+++|||+||+.|+........
T Consensus 161 ~~~~~~~---------~~~~~~~~~~~~~Pe~~~~-~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~ 230 (284)
T cd05038 161 EDKDYYY---------VKEPGESPIFWYAPECLRT-SKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQM 230 (284)
T ss_pred cCCccee---------ccCCCCCcccccCcHHHcc-CCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccc
Confidence 3211100 0001234456999998544 6788999999999999999999999865332211
Q ss_pred cHHHHHHHHHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhhh
Q 006522 575 GLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 640 (642)
Q Consensus 575 ~l~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l~ 640 (642)
....+.... ........ . .....++.+++.+||+.+|++||+|.||+++|++++
T Consensus 231 ~~~~~~~~~-~~~~~~~~--~---------~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i~ 284 (284)
T cd05038 231 IVTRLLELL-KEGERLPR--P---------PSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRLR 284 (284)
T ss_pred cHHHHHHHH-HcCCcCCC--C---------ccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhcC
Confidence 011111111 11111000 0 011135678999999999999999999999999874
No 208
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=1.6e-36 Score=315.01 Aligned_cols=205 Identities=24% Similarity=0.306 Sum_probs=165.2
Q ss_pred cccCcc--CCceeEEEEecCCCCCCCCeEEEEEEecCCCc-cccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEE
Q 006522 348 YVVGKS--KNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA-TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (642)
Q Consensus 348 ~~lg~g--~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 424 (642)
.+||+| +|++||++....++ +.||+|++..... ....+.+.+|+++++.++|||||+++++|..++..++||
T Consensus 4 ~~ig~G~~~~~~v~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 78 (327)
T cd08227 4 TVIGRGFEDLMTVNLARYKPTG-----EYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVT 78 (327)
T ss_pred hhccccccceEEEEEEeecccC-----cEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEE
Confidence 578999 67899999988775 8999999976432 223356778999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCC
Q 006522 425 DFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLP 504 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 504 (642)
||+++|+|.+++..+... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.++++||+......
T Consensus 79 e~~~~~~l~~~~~~~~~~---~l~~~~~~~i~~qi~~~L~~LH~---~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~ 152 (327)
T cd08227 79 SFMAYGSAKDLICTHFMD---GMSELAIAYILQGVLKALDYIHH---MGYVHRSVKASHILISVDGKVYLSGLRSNLSMI 152 (327)
T ss_pred eccCCCcHHHHHHhhccC---CCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCChhhEEEecCCcEEEcccchhhccc
Confidence 999999999999754322 48999999999999999999999 899999999999999999999999998655432
Q ss_pred CCCcccccceeeecCCCcccccCCCcccCccccccC-CCCCcccchHHHHHHHHHHHhCCCCCCC
Q 006522 505 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYG-SKFTQKCDVYSFGIVLLEILTGRLPDAG 568 (642)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~sDV~S~Gvvl~el~tG~~P~~~ 568 (642)
........ .........++..|+|||++... ..++.++|||||||++|||+||+.||..
T Consensus 153 ~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 212 (327)
T cd08227 153 NHGQRLRV-----VHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKD 212 (327)
T ss_pred cccccccc-----cccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 21110000 00001123456779999986543 4588999999999999999999999975
No 209
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=6.7e-37 Score=308.33 Aligned_cols=250 Identities=20% Similarity=0.268 Sum_probs=191.6
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
...||+|+||.||+|....++ +.||+|++..... ...+.+.+|+.++++++||||+++++++...+..++||||
T Consensus 14 ~~~lg~g~~g~vy~~~~~~~~-----~~~aik~~~~~~~-~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~ 87 (267)
T cd06646 14 IQRVGSGTYGDVYKARNLHTG-----ELAAVKIIKLEPG-DDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEY 87 (267)
T ss_pred hheeecCCCeEEEEEEECCCC-----eEEEEEEEecCcc-chHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeC
Confidence 467899999999999986654 7899999875432 2236688999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCC
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 506 (642)
+++|+|.++++... ++++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++.....
T Consensus 88 ~~~~~L~~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd06646 88 CGGGSLQDIYHVTG-----PLSELQIAYVCRETLQGLAYLHS---KGKMHRDIKGANILLTDNGDVKLADFGVAAKITAT 159 (267)
T ss_pred CCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCCEEECcCccceeeccc
Confidence 99999999987543 48999999999999999999999 89999999999999999999999999998765322
Q ss_pred CcccccceeeecCCCcccccCCCcccCccccc--cCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHH
Q 006522 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARI--YGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAF 584 (642)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~ 584 (642)
.. ......|+..|+|||.+. ....++.++|||||||++|||+||+.||....... ... ...
T Consensus 160 ~~------------~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~----~~~-~~~ 222 (267)
T cd06646 160 IA------------KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMR----ALF-LMS 222 (267)
T ss_pred cc------------ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhh----hhe-eee
Confidence 10 011235778899999853 23457889999999999999999999986432111 000 000
Q ss_pred hccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 006522 585 RERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSES 635 (642)
Q Consensus 585 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~ 635 (642)
..........++ ......+.+++.+||+.+|++||+++++++.
T Consensus 223 ~~~~~~~~~~~~--------~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 265 (267)
T cd06646 223 KSNFQPPKLKDK--------TKWSSTFHNFVKISLTKNPKKRPTAERLLTH 265 (267)
T ss_pred cCCCCCCCCccc--------cccCHHHHHHHHHHhhCChhhCcCHHHHhcC
Confidence 000000000000 0111346678999999999999999999864
No 210
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=3.1e-36 Score=309.99 Aligned_cols=260 Identities=21% Similarity=0.335 Sum_probs=193.7
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
.+.||+|+||.||++.....+ ..+|+|.+.........+++.+|++++.+++||||++++++|..++..++||||
T Consensus 6 ~~~lg~G~~g~v~~~~~~~~~-----~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey 80 (308)
T cd06615 6 LGELGAGNGGVVTKVLHRPSG-----LIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH 80 (308)
T ss_pred EeeccCCCCeEEEEEEEcCCC-----eEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence 467999999999999987664 789999887543333346788999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCC
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 506 (642)
+++++|.++++... .+++..+..++.|+++||+|||+. .+++||||||+||++++++.+||+|||++......
T Consensus 81 ~~~~~L~~~l~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 153 (308)
T cd06615 81 MDGGSLDQVLKKAG-----RIPENILGKISIAVLRGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 153 (308)
T ss_pred cCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhh--CCEEECCCChHHEEEecCCcEEEccCCCccccccc
Confidence 99999999997643 488999999999999999999972 47999999999999999999999999998654321
Q ss_pred CcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHhc
Q 006522 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE 586 (642)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~~ 586 (642)
. .....|+..|+|||.. .+..++.++|||||||++|||+||+.||..... .....+.......
T Consensus 154 ~--------------~~~~~~~~~~~aPE~~-~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~--~~~~~~~~~~~~~ 216 (308)
T cd06615 154 M--------------ANSFVGTRSYMSPERL-QGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDA--KELEAMFGRPVSE 216 (308)
T ss_pred c--------------cccCCCCcCccChhHh-cCCCCCccchHHHHHHHHHHHHhCCCCCCCcch--hhHHHhhcCcccc
Confidence 0 1134577889999985 446789999999999999999999999864321 1111111100000
Q ss_pred cCC--------CccccCh------hhhhc--------hhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 006522 587 RRP--------LSEVIDP------ALVKE--------IHAKRQVLATFHIALNCTELDPEFRPRMRTVSES 635 (642)
Q Consensus 587 ~~~--------~~~~~d~------~l~~~--------~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~ 635 (642)
... ....-++ ++.+. .........+.+++.+||+.+|++||++.|+++.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 287 (308)
T cd06615 217 GEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKH 287 (308)
T ss_pred ccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000 0000000 00000 0000012346789999999999999999999864
No 211
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=2.6e-36 Score=303.19 Aligned_cols=249 Identities=21% Similarity=0.302 Sum_probs=193.7
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCc----cccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA----TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLL 422 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 422 (642)
.+.||+|++|.||++....++ +.|++|.+..... ....+.+.+|++++++++||||+++++++...+..++
T Consensus 7 ~~~lg~g~~~~vy~~~~~~~~-----~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 7 GKLLGQGAFGRVYLCYDVDTG-----RELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred cceecCCCceEEEEEEEcCCC-----cEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 578999999999999987654 7899998865421 1223578899999999999999999999999999999
Q ss_pred EEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEeccccccc
Q 006522 423 ISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRL 502 (642)
Q Consensus 423 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 502 (642)
|+||+++++|.+++.... .+++..+..++.|++.||+|||+ .+++||||||+||++++++.++|+|||+++.
T Consensus 82 v~e~~~~~~l~~~~~~~~-----~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~ 153 (263)
T cd06625 82 FMEYMPGGSVKDQLKAYG-----ALTETVTRKYTRQILEGVEYLHS---NMIVHRDIKGANILRDSAGNVKLGDFGASKR 153 (263)
T ss_pred EEEECCCCcHHHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeeccccee
Confidence 999999999999987543 48889999999999999999999 8999999999999999999999999999876
Q ss_pred CCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHH
Q 006522 503 LPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRK 582 (642)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~ 582 (642)
...... .........|+..|+|||++.. ..++.++||||+||++|||++|+.||..... .......
T Consensus 154 ~~~~~~---------~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~g~~p~~~~~~----~~~~~~~ 219 (263)
T cd06625 154 LQTICS---------SGTGMKSVTGTPYWMSPEVISG-EGYGRKADVWSVGCTVVEMLTEKPPWAEFEA----MAAIFKI 219 (263)
T ss_pred cccccc---------ccccccCCCcCccccCcceecc-CCCCchhhhHHHHHHHHHHHhCCCCccccch----HHHHHHH
Confidence 532210 0001113456778999999554 6689999999999999999999999964321 1111111
Q ss_pred HHh-ccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 006522 583 AFR-ERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSES 635 (642)
Q Consensus 583 ~~~-~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~ 635 (642)
... ....++..+++ .+.+++.+||+.+|++|||+.|+++.
T Consensus 220 ~~~~~~~~~~~~~~~-------------~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 220 ATQPTNPQLPSHVSP-------------DARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred hccCCCCCCCccCCH-------------HHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 111 11112222222 34568888999999999999999863
No 212
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=1.9e-36 Score=302.89 Aligned_cols=247 Identities=22% Similarity=0.313 Sum_probs=196.0
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
...||+|+||.||++....++ ..+++|.++........+.+.+|+.++++++||||+++++++...+..++||||
T Consensus 5 ~~~lg~g~~g~v~~~~~~~~~-----~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 79 (255)
T cd08219 5 LRVVGEGSFGRALLVQHVNSD-----QKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEY 79 (255)
T ss_pred EEEeeccCCeEEEEEEEcCCC-----ceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEee
Confidence 467999999999999987664 789999986543333457888999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCC
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 506 (642)
+++|+|.+++..... ..+++.....++.|++.||.|||+ .+|+|+||||+||++++++.++++|||+++.....
T Consensus 80 ~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~i~~al~~lH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~ 153 (255)
T cd08219 80 CDGGDLMQKIKLQRG---KLFPEDTILQWFVQMCLGVQHIHE---KRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSP 153 (255)
T ss_pred CCCCcHHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCcceEEECCCCcEEEcccCcceeeccc
Confidence 999999999875432 248899999999999999999999 89999999999999999999999999998765332
Q ss_pred CcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHhc
Q 006522 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE 586 (642)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~~ 586 (642)
.. ......|+..|+|||+.. +..++.++||||||+++|+|++|+.||.... ...........
T Consensus 154 ~~------------~~~~~~~~~~~~aPE~~~-~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~-----~~~~~~~~~~~ 215 (255)
T cd08219 154 GA------------YACTYVGTPYYVPPEIWE-NMPYNNKSDIWSLGCILYELCTLKHPFQANS-----WKNLILKVCQG 215 (255)
T ss_pred cc------------ccccccCCccccCHHHHc-cCCcCchhhhhhhchhheehhhccCCCCCCC-----HHHHHHHHhcC
Confidence 11 011345778899999854 4678999999999999999999999997422 22222222222
Q ss_pred cC-CCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 006522 587 RR-PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSES 635 (642)
Q Consensus 587 ~~-~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~ 635 (642)
.. +++..++ ..+.+++.+||+.||++||++.|++..
T Consensus 216 ~~~~~~~~~~-------------~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 216 SYKPLPSHYS-------------YELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred CCCCCCcccC-------------HHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 11 1111121 234568889999999999999999864
No 213
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.4e-36 Score=309.05 Aligned_cols=245 Identities=19% Similarity=0.297 Sum_probs=191.8
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
...||+|++|.||+++....+ ..|++|.+...... ..+.+.+|+.++++++||||+++++++......++||||
T Consensus 25 ~~~lg~g~~~~v~~~~~~~~~-----~~v~ik~~~~~~~~-~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~ 98 (296)
T cd06654 25 FEKIGQGASGTVYTAMDVATG-----QEVAIRQMNLQQQP-KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (296)
T ss_pred EEEecCCCCeEEEEEEECCCC-----cEEEEEEEecCCcc-hHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecc
Confidence 356899999999999976554 78999998764332 237789999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCC
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 506 (642)
+++++|.+++... .+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.....
T Consensus 99 ~~~~~L~~~~~~~------~~~~~~~~~i~~ql~~aL~~LH~---~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~ 169 (296)
T cd06654 99 LAGGSLTDVVTET------CMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 169 (296)
T ss_pred cCCCCHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCEEECccccchhcccc
Confidence 9999999998642 37899999999999999999999 89999999999999999999999999998764322
Q ss_pred CcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHhc
Q 006522 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE 586 (642)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~~ 586 (642)
.. ......|++.|+|||.+. +..++.++|||||||++|||+||+.||...... ..+.......
T Consensus 170 ~~------------~~~~~~~~~~y~aPE~~~-~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~----~~~~~~~~~~ 232 (296)
T cd06654 170 QS------------KRSTMVGTPYWMAPEVVT-RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL----RALYLIATNG 232 (296)
T ss_pred cc------------ccCcccCCccccCHHHHc-CCCCCccchHHHHHHHHHHHHhCCCCCCCCCHH----HhHHHHhcCC
Confidence 10 011235778899999854 467889999999999999999999999753321 1111111111
Q ss_pred cCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 587 RRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 587 ~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
.+. .-.+. .....+.+++.+||..+|++||++.|+++
T Consensus 233 ~~~---~~~~~--------~~~~~l~~li~~~l~~~p~~Rpt~~eil~ 269 (296)
T cd06654 233 TPE---LQNPE--------KLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269 (296)
T ss_pred CCC---CCCcc--------ccCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence 111 00110 01123556889999999999999999986
No 214
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=5.1e-36 Score=299.96 Aligned_cols=245 Identities=26% Similarity=0.454 Sum_probs=195.4
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEe
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
....||+|++|.||++... + +.||+|.++.... ..+++.+|+.++++++|+||+++++++...+..++|||
T Consensus 10 ~~~~ig~g~~g~v~~~~~~-~------~~v~iK~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 80 (256)
T cd05039 10 LGATIGKGEFGDVMLGDYR-G------QKVAVKCLKDDST--AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTE 80 (256)
T ss_pred ceeeeecCCCceEEEEEec-C------cEEEEEEeccchh--HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEE
Confidence 3578999999999999875 2 6899999986543 34789999999999999999999999999899999999
Q ss_pred eccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCC
Q 006522 426 FIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPG 505 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 505 (642)
|+++++|.+++..... ..++|..+..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||.++....
T Consensus 81 ~~~~~~L~~~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lh~---~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~ 154 (256)
T cd05039 81 YMAKGSLVDYLRSRGR---AVITLAQQLGFALDVCEGMEYLEE---KNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQ 154 (256)
T ss_pred ecCCCcHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHh---CCccchhcccceEEEeCCCCEEEccccccccccc
Confidence 9999999999976543 248999999999999999999999 8999999999999999999999999999876532
Q ss_pred CCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHHH
Q 006522 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAF 584 (642)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~~l~~~~~~~~ 584 (642)
... ...++..|+|||+.. ...++.++||||||+++||+++ |+.||.... .........
T Consensus 155 ~~~---------------~~~~~~~~~ape~~~-~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~-----~~~~~~~~~ 213 (256)
T cd05039 155 GQD---------------SGKLPVKWTAPEALR-EKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP-----LKDVVPHVE 213 (256)
T ss_pred ccc---------------cCCCcccccCchhhc-CCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCC-----HHHHHHHHh
Confidence 210 112345699999854 4678899999999999999998 999986432 112222111
Q ss_pred hccC-CCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhh
Q 006522 585 RERR-PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 639 (642)
Q Consensus 585 ~~~~-~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l 639 (642)
.... .....+ ...+.+++.+||+.+|++||++.|++++|+.+
T Consensus 214 ~~~~~~~~~~~-------------~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 214 KGYRMEAPEGC-------------PPEVYKVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred cCCCCCCccCC-------------CHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 1111 111111 13456789999999999999999999999864
No 215
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=3.8e-36 Score=301.73 Aligned_cols=248 Identities=28% Similarity=0.464 Sum_probs=196.0
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
...||+|++|.||++....+ +.|+||.+...... .+++.+|+.++++++||||+++++++......++||||
T Consensus 11 ~~~ig~g~~~~v~~~~~~~~------~~~~vK~~~~~~~~--~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 82 (261)
T cd05034 11 ERKLGAGQFGEVWMGTWNGT------TKVAVKTLKPGTMS--PEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEY 82 (261)
T ss_pred eeeeccCcceEEEEEEEcCC------ceEEEEEecCCccC--HHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEec
Confidence 46799999999999997655 67999998764332 37899999999999999999999999988899999999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCC
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 506 (642)
+++++|.+++..... ..+++..+..++.|++.||+|||+ .+++|+||||+||++++++.+|++|||+++.....
T Consensus 83 ~~~~~L~~~i~~~~~---~~~~~~~~~~~~~~i~~al~~lh~---~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~ 156 (261)
T cd05034 83 MSKGSLLDFLKSGEG---KKLRLPQLVDMAAQIAEGMAYLES---RNYIHRDLAARNILVGENLVCKIADFGLARLIEDD 156 (261)
T ss_pred cCCCCHHHHHhcccc---CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcchheEEEcCCCCEEECccccceeccch
Confidence 999999999976542 248999999999999999999999 89999999999999999999999999998765432
Q ss_pred CcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHHHh
Q 006522 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFR 585 (642)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~~l~~~~~~~~~ 585 (642)
.... .....++..|+|||.+. +..++.++||||+||++||++| |+.||.+... .........
T Consensus 157 ~~~~-----------~~~~~~~~~y~~PE~~~-~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~-----~~~~~~~~~ 219 (261)
T cd05034 157 EYTA-----------REGAKFPIKWTAPEAAN-YGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTN-----REVLEQVER 219 (261)
T ss_pred hhhh-----------hhccCCCccccCHHHhc-cCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHHc
Confidence 1000 00112345699999854 4678999999999999999999 9999964321 122222222
Q ss_pred c-cCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHh
Q 006522 586 E-RRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 638 (642)
Q Consensus 586 ~-~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 638 (642)
. ..+..... ...+.+++.+|++.+|++||+++++.+.|+.
T Consensus 220 ~~~~~~~~~~-------------~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 220 GYRMPRPPNC-------------PEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred CCCCCCCCCC-------------CHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 1 11111111 1245678999999999999999999999875
No 216
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=4.5e-36 Score=299.35 Aligned_cols=248 Identities=25% Similarity=0.402 Sum_probs=194.2
Q ss_pred ccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEeecc
Q 006522 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIR 428 (642)
Q Consensus 349 ~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~ 428 (642)
.||+|++|.||++....+ +.|++|.+.........+.|.+|++++++++||||+++++++......++||||++
T Consensus 2 ~lg~g~~g~v~~~~~~~~------~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 75 (251)
T cd05041 2 KIGKGNFGDVYKGVLKGN------TEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVP 75 (251)
T ss_pred ccccCCCceEEEEEEeCC------CcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCC
Confidence 689999999999998774 89999998765443344789999999999999999999999999999999999999
Q ss_pred CCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCCCc
Q 006522 429 NGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSK 508 (642)
Q Consensus 429 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 508 (642)
+++|.+++..... .+++..+..++.+++.||+|||+ ++++||||||+||+++.++.+||+|||+++.......
T Consensus 76 ~~~l~~~l~~~~~----~~~~~~~~~~~~~~~~~l~~lH~---~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~ 148 (251)
T cd05041 76 GGSLLTFLRKKKN----RLTVKKLLQMSLDAAAGMEYLES---KNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIY 148 (251)
T ss_pred CCcHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHh---CCEehhhcCcceEEEcCCCcEEEeeccccccccCCcc
Confidence 9999999976432 48899999999999999999999 8999999999999999999999999999876542211
Q ss_pred ccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHHHhc-
Q 006522 509 VTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFRE- 586 (642)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~~l~~~~~~~~~~- 586 (642)
.. ......++..|+|||.+. +..++.++|||||||++|||+| |..||..... ..........
T Consensus 149 ~~----------~~~~~~~~~~y~~PE~~~-~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~-----~~~~~~~~~~~ 212 (251)
T cd05041 149 TV----------SDGLKQIPIKWTAPEALN-YGRYTSESDVWSYGILLWETFSLGDTPYPGMSN-----QQTRERIESGY 212 (251)
T ss_pred ee----------ccccCcceeccCChHhhc-cCCCCcchhHHHHHHHHHHHHhccCCCCccCCH-----HHHHHHHhcCC
Confidence 00 001122345699999854 4678999999999999999999 8888864321 1111111111
Q ss_pred cCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHh
Q 006522 587 RRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 638 (642)
Q Consensus 587 ~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 638 (642)
..+..+.. ...+.+++.+||+.+|++||++.|+++.|+.
T Consensus 213 ~~~~~~~~-------------~~~~~~li~~~l~~~p~~Rp~~~ell~~l~~ 251 (251)
T cd05041 213 RMPAPQLC-------------PEEIYRLMLQCWAYDPENRPSFSEIYNELQI 251 (251)
T ss_pred CCCCCccC-------------CHHHHHHHHHHhccChhhCcCHHHHHHHhhC
Confidence 11111111 1246678999999999999999999998863
No 217
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=3.3e-36 Score=316.71 Aligned_cols=193 Identities=21% Similarity=0.301 Sum_probs=160.8
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC-ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCC------c
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYAND------E 419 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~------~ 419 (642)
...||+|+||.||++.....+ +.||||.+.... .....+.+.+|+.++++++||||+++++++...+ .
T Consensus 26 ~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 100 (359)
T cd07876 26 LKPIGSGAQGIVCAAFDTVLG-----INVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQD 100 (359)
T ss_pred EEEeecCCCEEEEEEEEcCCC-----ceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccce
Confidence 468999999999999987654 899999987542 2223467889999999999999999999987543 4
Q ss_pred eEEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccc
Q 006522 420 KLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGL 499 (642)
Q Consensus 420 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGl 499 (642)
.++||||+++ +|.+.++. .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+
T Consensus 101 ~~lv~e~~~~-~l~~~~~~-------~~~~~~~~~~~~qi~~~L~~LH~---~~ivHrDlkp~NIl~~~~~~~kl~Dfg~ 169 (359)
T cd07876 101 VYLVMELMDA-NLCQVIHM-------ELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGL 169 (359)
T ss_pred eEEEEeCCCc-CHHHHHhc-------cCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEecCCC
Confidence 6999999975 67776642 27889999999999999999999 8999999999999999999999999999
Q ss_pred cccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCC
Q 006522 500 NRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGP 569 (642)
Q Consensus 500 a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~ 569 (642)
++...... ......||+.|+|||++. +..++.++||||+||++|||+||+.||.+.
T Consensus 170 a~~~~~~~-------------~~~~~~~t~~y~aPE~~~-~~~~~~~~DiwSlG~il~el~tg~~pf~~~ 225 (359)
T cd07876 170 ARTACTNF-------------MMTPYVVTRYYRAPEVIL-GMGYKENVDIWSVGCIMGELVKGSVIFQGT 225 (359)
T ss_pred ccccccCc-------------cCCCCcccCCCCCchhcc-CCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Confidence 87543221 111346788899999854 477899999999999999999999999754
No 218
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.2e-36 Score=321.31 Aligned_cols=259 Identities=19% Similarity=0.268 Sum_probs=189.5
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
...||+|+||.||++...... ..+.|++|.+... +.+.+|++++++++|||||++++++......++||||
T Consensus 97 ~~~Lg~G~~g~Vy~~~~~~~~---~~~~v~vK~~~~~------~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~ 167 (392)
T PHA03207 97 LSSLTPGSEGEVFVCTKHGDE---QRKKVIVKAVTGG------KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMPK 167 (392)
T ss_pred EEeecCCCCeEEEEEEEcCCc---cceeEEEEecccc------ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEehh
Confidence 467999999999999764321 2278999988653 3456899999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCC
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 506 (642)
+. ++|.+++.... .+++..++.|+.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++.....
T Consensus 168 ~~-~~l~~~l~~~~-----~l~~~~~~~i~~ql~~aL~~LH~---~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~ 238 (392)
T PHA03207 168 YK-CDLFTYVDRSG-----PLPLEQAITIQRRLLEALAYLHG---RGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAH 238 (392)
T ss_pred cC-CCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEcCCCCEEEccCccccccCcc
Confidence 96 68999884332 49999999999999999999999 89999999999999999999999999999765432
Q ss_pred CcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCc--ccHHHHHHHHH
Q 006522 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDG--KGLESLVRKAF 584 (642)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~--~~l~~~~~~~~ 584 (642)
... .......||+.|+|||++. +..++.++|||||||++|||++|+.||.+..... ..+...++...
T Consensus 239 ~~~----------~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~ 307 (392)
T PHA03207 239 PDT----------PQCYGWSGTLETNSPELLA-LDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQ 307 (392)
T ss_pred ccc----------ccccccccccCccCHhHhc-CCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhc
Confidence 110 0111346889999999854 4678999999999999999999999997643321 11111111110
Q ss_pred hccCCCccccChhhhh-----------------chhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 585 RERRPLSEVIDPALVK-----------------EIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 585 ~~~~~~~~~~d~~l~~-----------------~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
.....+.......+.. .+........+.+++.+|+..||++|||+.|++.
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~ 374 (392)
T PHA03207 308 VHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILS 374 (392)
T ss_pred cCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhh
Confidence 0000000000000000 0000011234567889999999999999999986
No 219
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2.9e-36 Score=306.66 Aligned_cols=252 Identities=24% Similarity=0.332 Sum_probs=198.0
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
.+.||+|+||.||++....++ +.||+|.+.........+++.+|+++++.++||||+++++++...+..++||||
T Consensus 10 ~~~ig~g~~g~v~~~~~~~~~-----~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (284)
T cd06620 10 ISDLGAGNGGSVSKVKHIPTG-----TVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF 84 (284)
T ss_pred HHHcCCCCCeEEEEEEEcCCC-----cEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence 467999999999999987654 789999887654443447899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCC
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 506 (642)
+++|+|.+++...+ ++++..+..++.+++.||.|||+. .+++||||||+||++++++.++|+|||++......
T Consensus 85 ~~~~~L~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~ 157 (284)
T cd06620 85 MDCGSLDRIYKKGG-----PIPVEILGKIAVAVVEGLTYLYNV--HRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS 157 (284)
T ss_pred CCCCCHHHHHHhcc-----CCCHHHHHHHHHHHHHHHHHHHHh--cCeeccCCCHHHEEECCCCcEEEccCCcccchhhh
Confidence 99999999987643 489999999999999999999962 47999999999999999999999999998654221
Q ss_pred CcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCC------cccHHHHH
Q 006522 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEND------GKGLESLV 580 (642)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~------~~~l~~~~ 580 (642)
. .....|+..|+|||++.. ..++.++|||||||++||++||+.||...... ...+..++
T Consensus 158 ~--------------~~~~~~~~~~~aPE~~~~-~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~ 222 (284)
T cd06620 158 I--------------ADTFVGTSTYMSPERIQG-GKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLL 222 (284)
T ss_pred c--------------cCccccCcccCCHHHHcc-CCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHH
Confidence 0 113457888999998554 67889999999999999999999999754321 11122333
Q ss_pred HHHHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHH
Q 006522 581 RKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESL 636 (642)
Q Consensus 581 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L 636 (642)
........+. +.. ......+.+++.+||+.||++||++.|+++..
T Consensus 223 ~~~~~~~~~~---~~~--------~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~ 267 (284)
T cd06620 223 QQIVQEPPPR---LPS--------SDFPEDLRDFVDACLLKDPTERPTPQQLCAMP 267 (284)
T ss_pred HHHhhccCCC---CCc--------hhcCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence 3333222110 000 01123466788999999999999999999753
No 220
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=2.7e-36 Score=309.50 Aligned_cols=261 Identities=17% Similarity=0.232 Sum_probs=192.5
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
...||+|+||.||++.....+ +.||+|.+...........+.+|+.++++++||||+++++++...+..++||||
T Consensus 11 ~~~lg~g~~g~vy~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~ 85 (301)
T cd07873 11 LDKLGEGTYATVYKGRSKLTD-----NLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 85 (301)
T ss_pred eeEeccCcCEEEEEEEEcCCC-----cEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence 357999999999999987654 789999987553333335678999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCC
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 506 (642)
++ ++|.+++..... .+++..+..++.|+++||+|||+ .+|+||||||+||++++++.+||+|||+++.....
T Consensus 86 ~~-~~l~~~l~~~~~----~~~~~~~~~~~~qi~~aL~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 157 (301)
T cd07873 86 LD-KDLKQYLDDCGN----SINMHNVKLFLFQLLRGLNYCHR---RKVLHRDLKPQNLLINERGELKLADFGLARAKSIP 157 (301)
T ss_pred cc-cCHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHHHEEECCCCcEEECcCcchhccCCC
Confidence 97 599999876432 48899999999999999999999 89999999999999999999999999998754322
Q ss_pred CcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHhc
Q 006522 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE 586 (642)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~~ 586 (642)
... .....+++.|+|||.+.....++.++|||||||++|||+||+.||...... .....+......
T Consensus 158 ~~~------------~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~--~~~~~~~~~~~~ 223 (301)
T cd07873 158 TKT------------YSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVE--EQLHFIFRILGT 223 (301)
T ss_pred CCc------------ccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHcCC
Confidence 100 012245678999998655456889999999999999999999999753221 111111111100
Q ss_pred cC--CCccccC---------hhhhhch---hHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 587 RR--PLSEVID---------PALVKEI---HAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 587 ~~--~~~~~~d---------~~l~~~~---~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
.. ......+ +...... ........+.+++.+|++.||++|||+.|+++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 224 PTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred CChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 00 0000000 0000000 00001224567999999999999999999986
No 221
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=3.8e-36 Score=303.03 Aligned_cols=248 Identities=23% Similarity=0.336 Sum_probs=190.6
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
...||+|+||.||+|....++ ..|++|.+...... ..+.+.+|+.++++++|+||+++++++...+..++|+||
T Consensus 13 ~~~lg~g~~g~v~~~~~~~~~-----~~v~~k~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 86 (268)
T cd06624 13 RVVLGKGTYGIVYAARDLSTQ-----VRIAIKEIPERDSR-YVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQ 86 (268)
T ss_pred eEEEecCCceEEEEeEecCCC-----cEEEEEEecCCCHH-HHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEec
Confidence 457999999999999987664 78999988764332 336889999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcCCCCCCCCC--CHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCC-CCCeEEecccccccC
Q 006522 427 IRNGSLYAALHAGPSDSLPPL--PWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDD-ELHPCISGFGLNRLL 503 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l--~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~-~~~~kl~DfGla~~~ 503 (642)
+++++|.+++..... ++ ++..+..++.||+.||+|||+ .+|+||||||+||+++. ++.+||+|||++...
T Consensus 87 ~~~~~L~~~l~~~~~----~~~~~~~~~~~~~~qi~~al~~lH~---~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~ 159 (268)
T cd06624 87 VPGGSLSALLRSKWG----PLKDNEQTIIFYTKQILEGLKYLHD---NQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRL 159 (268)
T ss_pred CCCCCHHHHHHHhcc----cCCCcHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCeEEEecchhheec
Confidence 999999999976432 24 788889999999999999999 89999999999999976 679999999998765
Q ss_pred CCCCcccccceeeecCCCcccccCCCcccCccccccC-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHH
Q 006522 504 PGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYG-SKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRK 582 (642)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~ 582 (642)
..... ......|+..|+|||++... ..++.++|||||||++|||++|+.||....... ...+...
T Consensus 160 ~~~~~------------~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~--~~~~~~~ 225 (268)
T cd06624 160 AGINP------------CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQ--AAMFKVG 225 (268)
T ss_pred ccCCC------------ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChh--hhHhhhh
Confidence 32210 01123467789999985442 347899999999999999999999986432211 1111111
Q ss_pred HHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 583 AFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 583 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
.......++..+++ ++.+++.+||+.+|++|||+.|+++
T Consensus 226 ~~~~~~~~~~~~~~-------------~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 226 MFKIHPEIPESLSA-------------EAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred hhccCCCCCcccCH-------------HHHHHHHHHcCCCchhCCCHHHHHh
Confidence 11111112222222 3456788899999999999999875
No 222
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=4.1e-36 Score=303.39 Aligned_cols=247 Identities=19% Similarity=0.283 Sum_probs=190.4
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcc-cCCCeeeEEEEEEeC------Cc
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYAN------DE 419 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~------~~ 419 (642)
...||+|+||.||+|.....+ +.||+|.+...... ...+.+|+.++.++ +||||+++++++... ..
T Consensus 11 ~~~lg~g~~g~vy~~~~~~~~-----~~~aik~~~~~~~~--~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~ 83 (272)
T cd06637 11 VELVGNGTYGQVYKGRHVKTG-----QLAAIKVMDVTGDE--EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQ 83 (272)
T ss_pred HHheeecCCeEEEEEEEcCCC-----cEEEEEEEEcCCcc--HHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcE
Confidence 357999999999999987765 89999998754322 36788999999999 799999999998763 35
Q ss_pred eEEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccc
Q 006522 420 KLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGL 499 (642)
Q Consensus 420 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGl 499 (642)
.++||||+++|+|.+++..... ..++|..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+
T Consensus 84 ~~iv~e~~~~~~L~~~l~~~~~---~~l~~~~~~~~~~qi~~~l~~LH~---~~ivh~dl~~~nili~~~~~~~l~Dfg~ 157 (272)
T cd06637 84 LWLVMEFCGAGSVTDLIKNTKG---NTLKEEWIAYICREILRGLSHLHQ---HKVIHRDIKGQNVLLTENAEVKLVDFGV 157 (272)
T ss_pred EEEEEEcCCCCcHHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHEEECCCCCEEEccCCC
Confidence 7899999999999999986432 248999999999999999999999 8999999999999999999999999999
Q ss_pred cccCCCCCcccccceeeecCCCcccccCCCcccCcccccc----CCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCccc
Q 006522 500 NRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIY----GSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKG 575 (642)
Q Consensus 500 a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~ 575 (642)
++....... ......|+..|+|||++.. ...++.++|||||||++|||++|+.||.....
T Consensus 158 ~~~~~~~~~------------~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~---- 221 (272)
T cd06637 158 SAQLDRTVG------------RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHP---- 221 (272)
T ss_pred ceecccccc------------cCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCH----
Confidence 876532210 1113467888999998542 23578899999999999999999999964221
Q ss_pred HHHHHHHHHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 576 LESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 576 l~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
..... ...... .....+.. ....+.+++.+||+.+|.+|||+.|+++
T Consensus 222 ~~~~~-~~~~~~--~~~~~~~~---------~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 222 MRALF-LIPRNP--APRLKSKK---------WSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred HHHHH-HHhcCC--CCCCCCCC---------cCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 11111 111111 11111111 1124567899999999999999999875
No 223
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=4.5e-36 Score=303.67 Aligned_cols=259 Identities=22% Similarity=0.367 Sum_probs=200.6
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
...||+|+||.||++........+..+.|++|.+.........++|.+|++++++++||||+++++++...+..++||||
T Consensus 10 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 89 (275)
T cd05046 10 ITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHYMILEY 89 (275)
T ss_pred eeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcceEEEEe
Confidence 35689999999999998776555566889999987654433347899999999999999999999999998999999999
Q ss_pred ccCCcHHHHHhcCCCCC----CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEeccccccc
Q 006522 427 IRNGSLYAALHAGPSDS----LPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRL 502 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 502 (642)
+++|+|.+++....... ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.++++|||+++.
T Consensus 90 ~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~---~~i~H~dlkp~Nili~~~~~~~l~~~~~~~~ 166 (275)
T cd05046 90 TDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSN---ARFVHRDLAARNCLVSSQREVKVSLLSLSKD 166 (275)
T ss_pred cCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhh---cCcccCcCccceEEEeCCCcEEEcccccccc
Confidence 99999999997654221 1258999999999999999999999 8999999999999999999999999999875
Q ss_pred CCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHH
Q 006522 503 LPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVR 581 (642)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~~l~~~~~ 581 (642)
....... ......++..|+|||.+.. ..++.++|||||||++|||++ |..||..... ...+.
T Consensus 167 ~~~~~~~-----------~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~-----~~~~~ 229 (275)
T cd05046 167 VYNSEYY-----------KLRNALIPLRWLAPEAVQE-DDFSTKSDVWSFGVLMWEVFTQGELPFYGLSD-----EEVLN 229 (275)
T ss_pred cCccccc-----------ccCCceeEEeecChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCccccch-----HHHHH
Confidence 4322110 0112244567999998543 567899999999999999999 8889864321 12222
Q ss_pred HHHhccCC--CccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHh
Q 006522 582 KAFRERRP--LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 638 (642)
Q Consensus 582 ~~~~~~~~--~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 638 (642)
........ ....++ ..+.+++.+||+.+|++||++.|++..|++
T Consensus 230 ~~~~~~~~~~~~~~~~-------------~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~~ 275 (275)
T cd05046 230 RLQAGKLELPVPEGCP-------------SRLYKLMTRCWAVNPKDRPSFSELVSALGE 275 (275)
T ss_pred HHHcCCcCCCCCCCCC-------------HHHHHHHHHHcCCCcccCCCHHHHHHHhcC
Confidence 22211111 111111 245668899999999999999999998863
No 224
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=6.6e-36 Score=303.68 Aligned_cols=248 Identities=21% Similarity=0.305 Sum_probs=192.6
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
...||+|+||.||++.....+ ..+++|.+..... ...+.+.+|++++++++||||+++++++...+..++||||
T Consensus 10 ~~~lg~g~~g~v~~~~~~~~~-----~~~~~k~~~~~~~-~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~ 83 (282)
T cd06643 10 IGELGDGAFGKVYKAQNKETG-----VLAAAKVIDTKSE-EELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEF 83 (282)
T ss_pred HhhcccCCCeEEEEEEECCCC-----eEEEEEEeCCCCH-HHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEe
Confidence 356999999999999987764 7889999865432 2347789999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCC
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 506 (642)
+++|+|.+++.... .++++..+..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||+++.....
T Consensus 84 ~~~~~l~~~~~~~~----~~l~~~~~~~~~~qi~~~L~~LH~---~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~ 156 (282)
T cd06643 84 CAGGAVDAVMLELE----RPLTEPQIRVVCKQTLEALNYLHE---NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT 156 (282)
T ss_pred cCCCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCcccEEEccCCCEEEcccccccccccc
Confidence 99999999886533 248999999999999999999999 89999999999999999999999999998754322
Q ss_pred CcccccceeeecCCCcccccCCCcccCccccc----cCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHH
Q 006522 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARI----YGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRK 582 (642)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~ 582 (642)
.. ......++..|+|||++. .+..++.++|||||||++|||++|+.||..... ...+..
T Consensus 157 ~~------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~-----~~~~~~ 219 (282)
T cd06643 157 IQ------------RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNP-----MRVLLK 219 (282)
T ss_pred cc------------ccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCH-----HHHHHH
Confidence 10 011335778899999853 234577899999999999999999999864321 112222
Q ss_pred HHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 583 AFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 583 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
......+ ....+.. ....+.+++.+||+.||.+||++.++++
T Consensus 220 ~~~~~~~--~~~~~~~--------~~~~~~~li~~~l~~~p~~Rp~~~~il~ 261 (282)
T cd06643 220 IAKSEPP--TLAQPSR--------WSSEFKDFLKKCLEKNVDARWTTTQLLQ 261 (282)
T ss_pred HhhcCCC--CCCCccc--------cCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 2222111 1111110 1124567889999999999999999875
No 225
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=6.2e-36 Score=304.28 Aligned_cols=262 Identities=19% Similarity=0.251 Sum_probs=191.6
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCc-cccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEe
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA-TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
...||+|++|.||+|+...++ ..||+|.++.... ....+.+.+|+.++++++||||+++++++..++..++|||
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~-----~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (285)
T cd07861 5 IEKIGEGTYGVVYKGRNKKTG-----QIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFE 79 (285)
T ss_pred eeEecccCceEEEEEEECCCC-----cEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEe
Confidence 356899999999999987654 7899999875422 2233678899999999999999999999999999999999
Q ss_pred eccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCC
Q 006522 426 FIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPG 505 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 505 (642)
|++ ++|.+++...... ..+++..+..++.|+++||+|||+ .+++||||||+||+++.++.+||+|||+++....
T Consensus 80 ~~~-~~l~~~~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 153 (285)
T cd07861 80 FLS-MDLKKYLDSLPKG--QYMDAELVKSYLYQILQGILFCHS---RRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGI 153 (285)
T ss_pred cCC-CCHHHHHhcCCCC--CcCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCCHHHEEEcCCCcEEECcccceeecCC
Confidence 997 6899888654321 358999999999999999999999 8999999999999999999999999999875432
Q ss_pred CCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHh
Q 006522 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR 585 (642)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~ 585 (642)
... ......+++.|+|||++.....++.++|||||||++|||+||+.||...... .......+....
T Consensus 154 ~~~------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~-~~~~~~~~~~~~ 220 (285)
T cd07861 154 PVR------------VYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEI-DQLFRIFRILGT 220 (285)
T ss_pred Ccc------------cccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHHHHhCC
Confidence 210 0012245678999998655456789999999999999999999999753221 011111110000
Q ss_pred cc-------C-------CCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 586 ER-------R-------PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 586 ~~-------~-------~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
.. . .........+.... .....++.+++.+||+.||++|||+.++++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 221 PTEDVWPGVTSLPDYKNTFPKWKKGSLRSAV--KNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred CChhhhhcchhhHHHHhhccccCcchhHHhc--CCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 00 0 00000000000000 001234567999999999999999999875
No 226
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=6.8e-36 Score=299.81 Aligned_cols=249 Identities=27% Similarity=0.471 Sum_probs=193.5
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
.+.||+|+||.||++....+ ..+++|.+..... ..+.|.+|++++++++|+||+++++++.. ...+++|||
T Consensus 11 ~~~lg~g~~~~vy~~~~~~~------~~~~iK~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~ 81 (260)
T cd05073 11 EKKLGAGQFGEVWMATYNKH------TKVAVKTMKPGSM--SVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEF 81 (260)
T ss_pred EeEecCccceEEEEEEecCC------ccEEEEecCCChh--HHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEe
Confidence 46799999999999987665 6799998875432 23678999999999999999999999887 778999999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCC
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 506 (642)
+++|+|.+++..... ..+++..+..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||.++.....
T Consensus 82 ~~~~~L~~~~~~~~~---~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 155 (260)
T cd05073 82 MAKGSLLDFLKSDEG---SKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVIEDN 155 (260)
T ss_pred CCCCcHHHHHHhCCc---cccCHHHHHHHHHHHHHHHHHHHh---CCccccccCcceEEEcCCCcEEECCCcceeeccCC
Confidence 999999999976432 248899999999999999999998 89999999999999999999999999998765432
Q ss_pred CcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHHHh
Q 006522 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFR 585 (642)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~~l~~~~~~~~~ 585 (642)
.... .....++..|+|||++.. ..++.++|||||||++||++| |+.||..... ....... .
T Consensus 156 ~~~~-----------~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~-----~~~~~~~-~ 217 (260)
T cd05073 156 EYTA-----------REGAKFPIKWTAPEAINF-GSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN-----PEVIRAL-E 217 (260)
T ss_pred Cccc-----------ccCCcccccccCHhHhcc-CCcCccccchHHHHHHHHHHhcCCCCCCCCCH-----HHHHHHH-h
Confidence 1100 011234567999998544 678999999999999999999 9999974321 1111111 1
Q ss_pred ccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhh
Q 006522 586 ERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 639 (642)
Q Consensus 586 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l 639 (642)
..... +. .. ....++.+++.+||+.+|++||++.++.+.|+.+
T Consensus 218 ~~~~~-~~-~~---------~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~~ 260 (260)
T cd05073 218 RGYRM-PR-PE---------NCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDF 260 (260)
T ss_pred CCCCC-CC-cc---------cCCHHHHHHHHHHcccCcccCcCHHHHHHHHhcC
Confidence 11111 00 00 1112466788999999999999999999999853
No 227
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=6e-37 Score=319.01 Aligned_cols=193 Identities=23% Similarity=0.362 Sum_probs=166.2
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhccc-C-----CCeeeEEEEEEeCCce
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ-H-----PNIVRLKAFYYANDEK 420 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-H-----~nIv~l~~~~~~~~~~ 420 (642)
.++||+|.||.|.+|++..++ +.||||+++..... ..+-..|+.+|..++ | -|+|++++||...++.
T Consensus 191 ~e~LGkGtFGQVvk~~d~~T~-----e~VAIKIiKN~k~f--~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hl 263 (586)
T KOG0667|consen 191 LEVLGKGSFGQVVKAYDHKTG-----EIVAIKIIKNKKRF--LRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHL 263 (586)
T ss_pred EEEecccccceeEEEEecCCC-----cEEEEEeeccChHH--HHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccce
Confidence 478999999999999999876 89999999875432 366778999999997 5 3799999999999999
Q ss_pred EEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCC--CCCeEEeccc
Q 006522 421 LLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDD--ELHPCISGFG 498 (642)
Q Consensus 421 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~--~~~~kl~DfG 498 (642)
+||+|.+.. +|+++++...-. +|+......|+.||+.||.+||+ .+|||+||||+||||.+ ...+||+|||
T Consensus 264 ciVfELL~~-NLYellK~n~f~---Glsl~~ir~~~~Qil~~L~~L~~---l~IIHcDLKPENILL~~~~r~~vKVIDFG 336 (586)
T KOG0667|consen 264 CIVFELLST-NLYELLKNNKFR---GLSLPLVRKFAQQILTALLFLHE---LGIIHCDLKPENILLKDPKRSRIKVIDFG 336 (586)
T ss_pred eeeehhhhh-hHHHHHHhcCCC---CCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCChhheeeccCCcCceeEEecc
Confidence 999999976 999999877643 49999999999999999999999 89999999999999964 3479999999
Q ss_pred ccccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCC
Q 006522 499 LNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGP 569 (642)
Q Consensus 499 la~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~ 569 (642)
.|........ ...-+..|+|||++++ ..|+.+.||||||||+.||+||.+-|.+.
T Consensus 337 SSc~~~q~vy---------------tYiQSRfYRAPEVILG-lpY~~~IDmWSLGCIlAEL~tG~PLfpG~ 391 (586)
T KOG0667|consen 337 SSCFESQRVY---------------TYIQSRFYRAPEVILG-LPYDTAIDMWSLGCILAELFTGEPLFPGD 391 (586)
T ss_pred cccccCCcce---------------eeeeccccccchhhcc-CCCCCccceeehhhhHHhHhcCccccCCC
Confidence 9987655422 1233567999999765 89999999999999999999998777764
No 228
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-38 Score=297.74 Aligned_cols=245 Identities=20% Similarity=0.350 Sum_probs=201.1
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
-..+|+|+||.||++..+..+ .++|+|++....+ .+++..|+.+|++++.|+||++||.|......++||||
T Consensus 38 ~~KLGEGSYGSV~KAIH~EsG-----~v~AIK~VPV~sD---LQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEY 109 (502)
T KOG0574|consen 38 VGKLGEGSYGSVHKAIHRESG-----HVLAIKKVPVDTD---LQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEY 109 (502)
T ss_pred HHHhcCCcchHHHHHHHhccC-----cEEEEEecCccch---HHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhh
Confidence 356899999999999988876 8999999875433 37889999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCC
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 506 (642)
|-.|+..+.++.+.. +|++..+..+.+..++||+|||. .+-||||||..|||++.+|.+|++|||.|..+.++
T Consensus 110 CGAGSiSDI~R~R~K----~L~E~EIs~iL~~TLKGL~YLH~---~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDT 182 (502)
T KOG0574|consen 110 CGAGSISDIMRARRK----PLSEQEISAVLRDTLKGLQYLHD---LKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDT 182 (502)
T ss_pred cCCCcHHHHHHHhcC----CccHHHHHHHHHHHHhHHHHHHH---HHHHHhhcccccEEEcccchhhhhhccccchhhhh
Confidence 999999999987654 59999999999999999999999 67899999999999999999999999999876543
Q ss_pred CcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHhc
Q 006522 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE 586 (642)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~~ 586 (642)
- .....+.||+.|||||++.. -.|++++||||+|++..||.-|++||.+...- ..++ ....
T Consensus 183 M------------AKRNTVIGTPFWMAPEVI~E-IGY~~~ADIWSLGITaIEMAEG~PPYsDIHPM----RAIF--MIPT 243 (502)
T KOG0574|consen 183 M------------AKRNTVIGTPFWMAPEVIEE-IGYDTKADIWSLGITAIEMAEGRPPYSDIHPM----RAIF--MIPT 243 (502)
T ss_pred H------------HhhCccccCcccccHHHHHH-hccchhhhHhhhcchhhhhhcCCCCccccccc----ceeE--eccC
Confidence 1 12235679999999999554 78999999999999999999999999763321 0000 0011
Q ss_pred cCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 587 RRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 587 ~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
.+| |.+ -..++...++-+++..|+-..|++|-|+.++++
T Consensus 244 ~PP------PTF---~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~ 282 (502)
T KOG0574|consen 244 KPP------PTF---KKPEEWSSEFNDFIRSCLIKKPEERKTALRLCE 282 (502)
T ss_pred CCC------CCC---CChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhh
Confidence 111 111 123345567788999999999999999988765
No 229
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=2.7e-36 Score=316.92 Aligned_cols=257 Identities=18% Similarity=0.259 Sum_probs=188.0
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC-ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCC------c
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYAND------E 419 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~------~ 419 (642)
.+.||+|+||.||+++....+ +.||||++.... .....+.+.+|+.+++.++||||+++++++.... .
T Consensus 22 ~~~lg~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 96 (355)
T cd07874 22 LKPIGSGAQGIVCAAYDAVLD-----RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQD 96 (355)
T ss_pred EEEeeecCCEEEEEEEecCCC-----ceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccccce
Confidence 467999999999999987654 789999997642 2223467889999999999999999999986543 4
Q ss_pred eEEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccc
Q 006522 420 KLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGL 499 (642)
Q Consensus 420 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGl 499 (642)
.++||||+++ +|.+.+.. .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+
T Consensus 97 ~~lv~e~~~~-~l~~~~~~-------~l~~~~~~~~~~qi~~aL~~LH~---~givHrDikp~Nill~~~~~~kl~Dfg~ 165 (355)
T cd07874 97 VYLVMELMDA-NLCQVIQM-------ELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGL 165 (355)
T ss_pred eEEEhhhhcc-cHHHHHhh-------cCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChHHEEECCCCCEEEeeCcc
Confidence 6999999975 77777642 37889999999999999999999 8999999999999999999999999999
Q ss_pred cccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHH
Q 006522 500 NRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESL 579 (642)
Q Consensus 500 a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~ 579 (642)
++...... ......||..|+|||++. +..++.++|||||||++|||++|+.||.+.... ......
T Consensus 166 ~~~~~~~~-------------~~~~~~~t~~y~aPE~~~-~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~~ 230 (355)
T cd07874 166 ARTAGTSF-------------MMTPYVVTRYYRAPEVIL-GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI-DQWNKV 230 (355)
T ss_pred cccCCCcc-------------ccCCccccCCccCHHHHc-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHH
Confidence 97643221 011346788899999854 467899999999999999999999999753211 011111
Q ss_pred HH------------------HHHhccCCCccccChhhh-hch------hHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 580 VR------------------KAFRERRPLSEVIDPALV-KEI------HAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 580 ~~------------------~~~~~~~~~~~~~d~~l~-~~~------~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
+. ..............+... ... ........+.+++.+|++.||++|||+.|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~ 310 (355)
T cd07874 231 IEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQ 310 (355)
T ss_pred HHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhc
Confidence 11 000000000000000000 000 00011245678999999999999999999986
No 230
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=4.8e-36 Score=316.06 Aligned_cols=193 Identities=19% Similarity=0.294 Sum_probs=161.0
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC-ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeC------Cc
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN------DE 419 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~------~~ 419 (642)
...||+|+||.||+++....+ +.||||++.... .....+.+.+|+.+++.++||||+++++++... ..
T Consensus 29 ~~~lg~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~~ 103 (364)
T cd07875 29 LKPIGSGAQGIVCAAYDAILE-----RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD 103 (364)
T ss_pred EEEeecCCCeEEEEEEECCCC-----cEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccCe
Confidence 468999999999999987665 789999997542 223346788999999999999999999988643 24
Q ss_pred eEEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccc
Q 006522 420 KLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGL 499 (642)
Q Consensus 420 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGl 499 (642)
.++||||+++ +|.+.+.. .+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+
T Consensus 104 ~~lv~e~~~~-~l~~~~~~-------~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 172 (364)
T cd07875 104 VYIVMELMDA-NLCQVIQM-------ELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGL 172 (364)
T ss_pred EEEEEeCCCC-CHHHHHHh-------cCCHHHHHHHHHHHHHHHHHHhh---CCeecCCCCHHHEEECCCCcEEEEeCCC
Confidence 7999999975 78777742 37889999999999999999999 8999999999999999999999999999
Q ss_pred cccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCC
Q 006522 500 NRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGP 569 (642)
Q Consensus 500 a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~ 569 (642)
++...... ......||..|+|||++. +..++.++|||||||++|||+||+.||...
T Consensus 173 a~~~~~~~-------------~~~~~~~t~~y~aPE~~~-~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 228 (364)
T cd07875 173 ARTAGTSF-------------MMTPYVVTRYYRAPEVIL-GMGYKENVDIWSVGCIMGEMIKGGVLFPGT 228 (364)
T ss_pred ccccCCCC-------------cccCCcccCCcCCHHHHh-CCCCCchhhHHhHHHHHHHHHhCCCCCCCC
Confidence 97643221 111346788899999854 477899999999999999999999999753
No 231
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=3e-36 Score=337.33 Aligned_cols=251 Identities=18% Similarity=0.262 Sum_probs=191.3
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC-ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeC--CceEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN--DEKLLI 423 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~lv 423 (642)
...||+|+||.||++...... ..||+|.+.... .......|.+|+.++++++|||||+++++|... ...|+|
T Consensus 18 l~kLG~GgFGtVYLAkdk~tg-----~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~lyIV 92 (1021)
T PTZ00266 18 IKKIGNGRFGEVFLVKHKRTQ-----EFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLYIL 92 (1021)
T ss_pred EEEEecCCCeEEEEEEECCCC-----eEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEEEE
Confidence 467999999999999988765 789999987542 222346789999999999999999999998654 468999
Q ss_pred EeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC----CCceecCCCCCCeeeCC-----------
Q 006522 424 SDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSP----RKYVHGNIKSTKILLDD----------- 488 (642)
Q Consensus 424 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~----~~iiHrDlkp~NILl~~----------- 488 (642)
|||+++|+|.++|...... ...+++..++.|+.||+.||+|||+... .+||||||||+|||++.
T Consensus 93 MEY~~gGSL~~lL~k~~~~-~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~ 171 (1021)
T PTZ00266 93 MEFCDAGDLSRNIQKCYKM-FGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQ 171 (1021)
T ss_pred EeCCCCCcHHHHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccccccc
Confidence 9999999999999753221 1359999999999999999999998431 35999999999999964
Q ss_pred ------CCCeEEecccccccCCCCCcccccceeeecCCCcccccCCCcccCcccccc-CCCCCcccchHHHHHHHHHHHh
Q 006522 489 ------ELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIY-GSKFTQKCDVYSFGIVLLEILT 561 (642)
Q Consensus 489 ------~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~sDV~S~Gvvl~el~t 561 (642)
...+||+|||+++.+.... ......||+.|+|||++.. ...++.++||||||||+|||+|
T Consensus 172 ~~n~ng~~iVKLsDFGlAr~l~~~s-------------~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLT 238 (1021)
T PTZ00266 172 ANNLNGRPIAKIGDFGLSKNIGIES-------------MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCS 238 (1021)
T ss_pred ccccCCCCceEEccCCccccccccc-------------cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHH
Confidence 3458999999997653221 1123468899999998643 2458899999999999999999
Q ss_pred CCCCCCCCCCCcccHHHHHHHHHhccCCCc-cccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 562 GRLPDAGPENDGKGLESLVRKAFRERRPLS-EVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 562 G~~P~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
|+.||.... ....++...... ..++ ...+ ..+.+|+..||+.+|.+||++.|++.
T Consensus 239 Gk~PF~~~~----~~~qli~~lk~~-p~lpi~~~S-------------~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 239 GKTPFHKAN----NFSQLISELKRG-PDLPIKGKS-------------KELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred CCCCCCcCC----cHHHHHHHHhcC-CCCCcCCCC-------------HHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 999997432 223333322221 1111 1111 23556888899999999999999983
No 232
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=3.1e-36 Score=314.97 Aligned_cols=251 Identities=20% Similarity=0.277 Sum_probs=187.3
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCc-cccHHHHHHHHHHHhcccCCCeeeEEEEEEeC------Cc
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA-TWRFKDFESEVEAIARVQHPNIVRLKAFYYAN------DE 419 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~------~~ 419 (642)
...||+|+||.||++....++ +.||||++..... ....+.+.+|+.++++++||||+++++++... ..
T Consensus 20 ~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 94 (343)
T cd07878 20 LTPVGSGAYGSVCSAYDTRLR-----QKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFNE 94 (343)
T ss_pred heecccCCCeEEEEEEECCCC-----CEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccCc
Confidence 367999999999999987665 7899999875422 22336678999999999999999999988643 35
Q ss_pred eEEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccc
Q 006522 420 KLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGL 499 (642)
Q Consensus 420 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGl 499 (642)
.++++|++ +++|.+++... .+++..+..++.||+.||+|||+ .+|+||||||+||++++++.+||+|||+
T Consensus 95 ~~~~~~~~-~~~l~~~~~~~------~l~~~~~~~i~~qi~~aL~~LH~---~~ivHrdikp~Nil~~~~~~~kl~Dfg~ 164 (343)
T cd07878 95 VYLVTNLM-GADLNNIVKCQ------KLSDEHVQFLIYQLLRGLKYIHS---AGIIHRDLKPSNVAVNEDCELRILDFGL 164 (343)
T ss_pred EEEEeecC-CCCHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHH---CCeecccCChhhEEECCCCCEEEcCCcc
Confidence 68999988 77999887532 38999999999999999999999 8999999999999999999999999999
Q ss_pred cccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHH
Q 006522 500 NRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESL 579 (642)
Q Consensus 500 a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~ 579 (642)
++..... .....||..|+|||++.....++.++||||+||++|||++|+.||.+... ...
T Consensus 165 ~~~~~~~---------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-----~~~ 224 (343)
T cd07878 165 ARQADDE---------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDY-----IDQ 224 (343)
T ss_pred ceecCCC---------------cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCH-----HHH
Confidence 8764322 11335788899999865545789999999999999999999999975321 111
Q ss_pred HHHHHhc-cCCCccc---cCh----------------hhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 580 VRKAFRE-RRPLSEV---IDP----------------ALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 580 ~~~~~~~-~~~~~~~---~d~----------------~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
+...... ..+..+. +.. .+..... .....+.+++.+|++.||++|||+.|+++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~li~~mL~~dp~~R~s~~ell~ 297 (343)
T cd07878 225 LKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFR--GANPLAIDLLEKMLVLDSDKRISASEALA 297 (343)
T ss_pred HHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhcc--CCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 1111110 0000000 000 0000000 00123568999999999999999999985
No 233
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=7e-36 Score=302.87 Aligned_cols=244 Identities=21% Similarity=0.239 Sum_probs=184.9
Q ss_pred ccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCc--cccHHHHHHHHHHHh---cccCCCeeeEEEEEEeCCceEEE
Q 006522 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA--TWRFKDFESEVEAIA---RVQHPNIVRLKAFYYANDEKLLI 423 (642)
Q Consensus 349 ~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~---~l~H~nIv~l~~~~~~~~~~~lv 423 (642)
+||+|+||.||++.....+ +.+|+|.+..... ......+.+|..++. ..+||||+.+++++...+..++|
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv 75 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTG-----KMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFI 75 (279)
T ss_pred CcccCCCeEEEEEEECCCC-----cEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEE
Confidence 4899999999999987654 7999998875422 111133445554443 34799999999999999999999
Q ss_pred EeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccC
Q 006522 424 SDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLL 503 (642)
Q Consensus 424 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 503 (642)
|||+++|+|.+++.... .++|..+..++.|++.||+|||+ .+|+||||||+||++++++.+|++|||++...
T Consensus 76 ~e~~~~~~L~~~i~~~~-----~l~~~~~~~i~~qi~~al~~lH~---~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~ 147 (279)
T cd05633 76 LDLMNGGDLHYHLSQHG-----VFSEKEMRFYATEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDF 147 (279)
T ss_pred EecCCCCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCcCCCCCCHHHEEECCCCCEEEccCCcceec
Confidence 99999999999987543 48999999999999999999999 89999999999999999999999999998654
Q ss_pred CCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHH
Q 006522 504 PGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKA 583 (642)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~ 583 (642)
.... .....|+..|+|||....+..++.++||||+||++|||+||+.||...... .........
T Consensus 148 ~~~~--------------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~--~~~~~~~~~ 211 (279)
T cd05633 148 SKKK--------------PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK--DKHEIDRMT 211 (279)
T ss_pred cccC--------------ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCc--CHHHHHHHh
Confidence 3211 112357888999998654456899999999999999999999999753322 111111111
Q ss_pred HhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCC-----CHHHHHH
Q 006522 584 FRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRP-----RMRTVSE 634 (642)
Q Consensus 584 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----s~~ev~~ 634 (642)
......+.+.+++ ++.+++.+||+.||++|| +++|+++
T Consensus 212 ~~~~~~~~~~~~~-------------~~~~li~~~l~~~p~~R~~~~~~~~~~~~~ 254 (279)
T cd05633 212 LTVNVELPDSFSP-------------ELKSLLEGLLQRDVSKRLGCLGRGAQEVKE 254 (279)
T ss_pred hcCCcCCccccCH-------------HHHHHHHHHhcCCHHHhcCCCCCCHHHHHh
Confidence 1111122222222 344577889999999999 5888876
No 234
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=9e-37 Score=283.37 Aligned_cols=254 Identities=22% Similarity=0.366 Sum_probs=199.2
Q ss_pred ccHHHHHhhcccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhccc-CCCeeeEEEEEE
Q 006522 337 LELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ-HPNIVRLKAFYY 415 (642)
Q Consensus 337 ~~~~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~ 415 (642)
.++.|+. .-..+|.|..|.|++......+ +.+|||.+......+..++++..+.++.+-+ .|.||+.+|||.
T Consensus 89 ~dindl~--~l~dlGsGtcG~V~k~~~rs~~-----~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi 161 (391)
T KOG0983|consen 89 ADINDLE--NLGDLGSGTCGQVWKMRFRSTG-----HIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFI 161 (391)
T ss_pred cChHHhh--hHHhhcCCCccceEEEEEcccc-----eEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEe
Confidence 3555553 3456899999999999998876 8999999998876666788999999887774 899999999999
Q ss_pred eCCceEEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEe
Q 006522 416 ANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCIS 495 (642)
Q Consensus 416 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~ 495 (642)
.+...++.||.|.. .+..+++.-. .++++...-++...+.+||.||.+. .+|+|||+||+|||+|+.|.+|+|
T Consensus 162 ~n~dV~IcMelMs~-C~ekLlkrik----~piPE~ilGk~tva~v~AL~YLKeK--H~viHRDvKPSNILlDe~GniKlC 234 (391)
T KOG0983|consen 162 TNTDVFICMELMST-CAEKLLKRIK----GPIPERILGKMTVAIVKALYYLKEK--HGVIHRDVKPSNILLDERGNIKLC 234 (391)
T ss_pred eCchHHHHHHHHHH-HHHHHHHHhc----CCchHHhhhhhHHHHHHHHHHHHHh--cceeecccCccceEEccCCCEEee
Confidence 99999999999854 6666665543 2588888889999999999999874 689999999999999999999999
Q ss_pred cccccccCCCCCcccccceeeecCCCcccccCCCcccCcccccc--CCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCc
Q 006522 496 GFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIY--GSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDG 573 (642)
Q Consensus 496 DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~ 573 (642)
|||++-.+.++.. ....+|.+.|||||.+.- ...|+.++|||||||.++||+||+.||.+...+-
T Consensus 235 DFGIsGrlvdSkA-------------htrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdF 301 (391)
T KOG0983|consen 235 DFGISGRLVDSKA-------------HTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDF 301 (391)
T ss_pred cccccceeecccc-------------cccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccH
Confidence 9999977654421 113567888999997543 2468999999999999999999999998755443
Q ss_pred ccHHHHHHHHHhccCC-Ccc--ccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 574 KGLESLVRKAFRERRP-LSE--VIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 574 ~~l~~~~~~~~~~~~~-~~~--~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
.. +.+...+.+| ++. -++| .+.++...|+..|+.+||...++++
T Consensus 302 e~----ltkvln~ePP~L~~~~gFSp-------------~F~~fv~~CL~kd~r~RP~Y~~Ll~ 348 (391)
T KOG0983|consen 302 EV----LTKVLNEEPPLLPGHMGFSP-------------DFQSFVKDCLTKDHRKRPKYNKLLE 348 (391)
T ss_pred HH----HHHHHhcCCCCCCcccCcCH-------------HHHHHHHHHhhcCcccCcchHHHhc
Confidence 22 2333333222 111 1333 3445777799999999999988875
No 235
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=1.4e-36 Score=315.64 Aligned_cols=199 Identities=22% Similarity=0.311 Sum_probs=167.4
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC--ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 424 (642)
...||+|+||.||+++....+ +.||+|.+.+.. .....+.|.+|+.++..++|+||+++++++...+..++||
T Consensus 6 ~~~lG~G~~g~V~~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 6 LKVIGRGAFGEVAVVKMKNTG-----QVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred EEEEEecCCeEEEEEEECCCC-----CEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 467999999999999988765 899999987531 1222366889999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCC
Q 006522 425 DFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLP 504 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 504 (642)
||+++|+|.+++..... .+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 81 e~~~g~~L~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 153 (331)
T cd05597 81 DYYVGGDLLTLLSKFED----RLPEDMARFYLAEMVLAIDSVHQ---LGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLL 153 (331)
T ss_pred ecCCCCcHHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHh---CCeEECCCCHHHEEECCCCCEEEEECCceeecC
Confidence 99999999999975432 38899999999999999999999 899999999999999999999999999987654
Q ss_pred CCCcccccceeeecCCCcccccCCCcccCcccccc----CCCCCcccchHHHHHHHHHHHhCCCCCCC
Q 006522 505 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIY----GSKFTQKCDVYSFGIVLLEILTGRLPDAG 568 (642)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~sDV~S~Gvvl~el~tG~~P~~~ 568 (642)
..... ......||+.|+|||++.. ...++.++|||||||++|||++|+.||..
T Consensus 154 ~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~ 210 (331)
T cd05597 154 ADGTV-----------QSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYA 210 (331)
T ss_pred CCCCc-----------cccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCC
Confidence 32110 1112468899999998542 24578899999999999999999999974
No 236
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=4.6e-36 Score=306.30 Aligned_cols=262 Identities=17% Similarity=0.235 Sum_probs=192.0
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
...||+|++|.||++....++ +.||+|.+...........+.+|++++++++||||+++++++...+..++||||
T Consensus 10 ~~~lg~g~~~~vy~~~~~~~~-----~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07844 10 LDKLGEGSYATVYKGRSKLTG-----QLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY 84 (291)
T ss_pred EEEEeecCCeEEEEEEEcCCC-----cEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence 467999999999999987654 789999987643332235677899999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCC
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 506 (642)
+.+ +|.+++..... .+++.....++.|++.||.|||+ .+|+||||||+||++++++.+||+|||+++.....
T Consensus 85 ~~~-~L~~~~~~~~~----~~~~~~~~~~~~ql~~al~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 156 (291)
T cd07844 85 LDT-DLKQYMDDCGG----GLSMHNVRLFLFQLLRGLAYCHQ---RRVLHRDLKPQNLLISERGELKLADFGLARAKSVP 156 (291)
T ss_pred CCC-CHHHHHHhCCC----CCCHHHHHHHHHHHHHHHHHHHh---CCeecccCCHHHEEEcCCCCEEECccccccccCCC
Confidence 985 99999876542 48999999999999999999999 89999999999999999999999999998653211
Q ss_pred CcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHhc
Q 006522 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE 586 (642)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~~ 586 (642)
.. . .....++..|+|||+......++.++||||+||++|||++|+.||.........+....+ ....
T Consensus 157 ~~---------~---~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~-~~~~ 223 (291)
T cd07844 157 SK---------T---YSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFR-VLGT 223 (291)
T ss_pred Cc---------c---ccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHH-hcCC
Confidence 10 0 011235677999998655456889999999999999999999999754321111111111 0000
Q ss_pred cCC--------C--------ccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 587 RRP--------L--------SEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 587 ~~~--------~--------~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
..+ . .......+............+.+++.+|++.+|++|||+.|+++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 224 PTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred CChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 000 0 00000111000000111245678999999999999999999875
No 237
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=1.4e-35 Score=298.77 Aligned_cols=250 Identities=22% Similarity=0.335 Sum_probs=192.8
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCcc--------ccHHHHHHHHHHHhcccCCCeeeEEEEEEeCC
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT--------WRFKDFESEVEAIARVQHPNIVRLKAFYYAND 418 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~--------~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~ 418 (642)
...||+|++|.||+|.....+ +.+|+|.+...... ...+.+.+|+.++++++||||+++++++...+
T Consensus 5 ~~~ig~g~~~~v~~a~~~~~~-----~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 79 (267)
T cd06628 5 GALIGSGSFGSVYLGMNASSG-----ELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDAD 79 (267)
T ss_pred cceeecCCCeEEEEEEecCCC-----cEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCC
Confidence 457999999999999986654 78999988654221 12256889999999999999999999999999
Q ss_pred ceEEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEeccc
Q 006522 419 EKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFG 498 (642)
Q Consensus 419 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfG 498 (642)
..++||||+++++|.+++.... .+++..+..++.|++.||+|||+ .+++||||||+||++++++.+||+|||
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~~~-----~l~~~~~~~~~~~l~~~l~~lH~---~~ivH~di~p~nil~~~~~~~~l~dfg 151 (267)
T cd06628 80 HLNIFLEYVPGGSVAALLNNYG-----AFEETLVRNFVRQILKGLNYLHN---RGIIHRDIKGANILVDNKGGIKISDFG 151 (267)
T ss_pred ccEEEEEecCCCCHHHHHHhcc-----CccHHHHHHHHHHHHHHHHHHHh---cCcccccCCHHHEEEcCCCCEEecccC
Confidence 9999999999999999997643 38899999999999999999999 899999999999999999999999999
Q ss_pred ccccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHH
Q 006522 499 LNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLES 578 (642)
Q Consensus 499 la~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~ 578 (642)
.++.......... .........|+..|+|||.+. +..++.++||||+||++|||+||+.||..... ...
T Consensus 152 ~~~~~~~~~~~~~------~~~~~~~~~~~~~y~~pe~~~-~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~----~~~ 220 (267)
T cd06628 152 ISKKLEANSLSTK------TNGARPSLQGSVFWMAPEVVK-QTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQ----LQA 220 (267)
T ss_pred CCcccccccccCC------ccccccccCCCcCccChhHhc-cCCCCchhhhHHHHHHHHHHhhCCCCCCCccH----HHH
Confidence 9987653211100 000111335778899999854 46788999999999999999999999975321 111
Q ss_pred HHHHHHhc-cCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 579 LVRKAFRE-RRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 579 ~~~~~~~~-~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
+...... .......++ ..+.+++.+||+.||++||++.|+++
T Consensus 221 -~~~~~~~~~~~~~~~~~-------------~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 221 -IFKIGENASPEIPSNIS-------------SEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred -HHHHhccCCCcCCcccC-------------HHHHHHHHHHccCCchhCcCHHHHhh
Confidence 1111111 111111111 23456888899999999999999875
No 238
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=5e-36 Score=303.72 Aligned_cols=244 Identities=23% Similarity=0.388 Sum_probs=192.9
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
.+.||+|+||.||+|....++ ..||+|.+.........+.+.+|++++++++||||+++++++...+..++||||
T Consensus 9 ~~~l~~g~~~~vy~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06642 9 LERIGKGSFGEVYKGIDNRTK-----EVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEY 83 (277)
T ss_pred HHHhcCCCCeeEEEEEEcCCC-----eEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEc
Confidence 356899999999999887654 789999987554334447899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCC
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 506 (642)
+++++|.+++... .+++..+..++.|++.|+.|||+ .+++|+||+|+||++++++.+|++|||+++.....
T Consensus 84 ~~~~~L~~~~~~~------~~~~~~~~~~~~~i~~~l~~lH~---~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~ 154 (277)
T cd06642 84 LGGGSALDLLKPG------PLEETYIATILREILKGLDYLHS---ERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDT 154 (277)
T ss_pred cCCCcHHHHhhcC------CCCHHHHHHHHHHHHHHHHHHhc---CCeeccCCChheEEEeCCCCEEEccccccccccCc
Confidence 9999999998642 38899999999999999999999 89999999999999999999999999998765432
Q ss_pred CcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHhc
Q 006522 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE 586 (642)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~~ 586 (642)
.. ......|+..|+|||++. +..++.++|||||||++|||+||+.|+...... .........
T Consensus 155 ~~------------~~~~~~~~~~y~aPE~~~-~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~-----~~~~~~~~~ 216 (277)
T cd06642 155 QI------------KRNTFVGTPFWMAPEVIK-QSAYDFKADIWSLGITAIELAKGEPPNSDLHPM-----RVLFLIPKN 216 (277)
T ss_pred ch------------hhhcccCcccccCHHHhC-cCCCchhhhHHHHHHHHHHHHhCCCCCcccchh-----hHHhhhhcC
Confidence 10 011234677899999854 467899999999999999999999998643211 111111111
Q ss_pred cCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 587 RRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 587 ~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
.. +.+.. .....+.+++.+||+.+|++||+|.|+++
T Consensus 217 ~~-------~~~~~-----~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 252 (277)
T cd06642 217 SP-------PTLEG-----QYSKPFKEFVEACLNKDPRFRPTAKELLK 252 (277)
T ss_pred CC-------CCCCc-----ccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 11 11111 11234567889999999999999999987
No 239
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.8e-36 Score=315.53 Aligned_cols=187 Identities=22% Similarity=0.317 Sum_probs=157.5
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEe
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
....||+|+||.||+|...... ..||+|.... .....|+.++++++|||||++++++...+..++|||
T Consensus 70 ~~~~lg~G~~g~Vy~~~~~~~~-----~~valK~~~~-------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 137 (357)
T PHA03209 70 VIKTLTPGSEGRVFVATKPGQP-----DPVVLKIGQK-------GTTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLP 137 (357)
T ss_pred EEEEecCCCCeEEEEEEECCCC-----ceEEEEeCCc-------cccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEE
Confidence 3568999999999999987664 7899997543 223569999999999999999999999999999999
Q ss_pred eccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCC
Q 006522 426 FIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPG 505 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 505 (642)
|+. |+|.+++.... ..++|..+..|+.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 138 ~~~-~~l~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 209 (357)
T PHA03209 138 HYS-SDLYTYLTKRS----RPLPIDQALIIEKQILEGLRYLHA---QRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVV 209 (357)
T ss_pred ccC-CcHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEecCcccccccc
Confidence 995 69999887543 248999999999999999999999 8999999999999999999999999999875322
Q ss_pred CCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCC
Q 006522 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPD 566 (642)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~ 566 (642)
.. ......||..|+|||++.. ..++.++|||||||++|||+++..|+
T Consensus 210 ~~-------------~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 210 AP-------------AFLGLAGTVETNAPEVLAR-DKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred Cc-------------ccccccccccccCCeecCC-CCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 11 0113457889999998554 67899999999999999999966554
No 240
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=2.1e-36 Score=318.16 Aligned_cols=208 Identities=21% Similarity=0.311 Sum_probs=169.9
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC--ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 424 (642)
.+.||+|+||.||++.....+ +.||+|.+.... .......+.+|+.++.+++||||+++++++...+..++||
T Consensus 6 ~~~lG~G~~g~V~~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 6 LKVIGRGAFGEVRLVQKKDTG-----HIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred EEEEeeCCCEEEEEEEECCCC-----CEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 467999999999999987765 899999997532 2223467889999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCC
Q 006522 425 DFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLP 504 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 504 (642)
||+++|+|.+++.... .+++.....++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++.+.
T Consensus 81 E~~~gg~L~~~l~~~~-----~l~~~~~~~~~~qi~~~L~~lH~---~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~ 152 (360)
T cd05627 81 EFLPGGDMMTLLMKKD-----TLSEEATQFYIAETVLAIDAIHQ---LGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLK 152 (360)
T ss_pred eCCCCccHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCeEccCCCHHHEEECCCCCEEEeeccCCcccc
Confidence 9999999999997643 38899999999999999999999 899999999999999999999999999987653
Q ss_pred CCCccccccee-----------------------eecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh
Q 006522 505 GTSKVTKNETI-----------------------VTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT 561 (642)
Q Consensus 505 ~~~~~~~~~~~-----------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t 561 (642)
........... ..........+||+.|+|||++. +..++.++|||||||++|||+|
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~-~~~~~~~~DiwSlGvilyel~t 231 (360)
T cd05627 153 KAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFM-QTGYNKLCDWWSLGVIMYEMLI 231 (360)
T ss_pred cccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHc-CCCCCCcceeccccceeeeccc
Confidence 22110000000 00000111347999999999854 4778999999999999999999
Q ss_pred CCCCCCC
Q 006522 562 GRLPDAG 568 (642)
Q Consensus 562 G~~P~~~ 568 (642)
|+.||..
T Consensus 232 G~~Pf~~ 238 (360)
T cd05627 232 GYPPFCS 238 (360)
T ss_pred CCCCCCC
Confidence 9999975
No 241
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=5.7e-36 Score=301.55 Aligned_cols=249 Identities=20% Similarity=0.304 Sum_probs=191.5
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
...||+|+||.||++.....+ +.||+|.++.... .....+.+|+.+++.++||||+++++++...+..++||||
T Consensus 14 ~~~lg~g~~~~v~~~~~~~~~-----~~~~ik~~~~~~~-~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~ 87 (267)
T cd06645 14 IQRIGSGTYGDVYKARNVNTG-----ELAAIKVIKLEPG-EDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEF 87 (267)
T ss_pred HHHhCCCCCeEEEEEEEcCCC-----cEEEEEEEecCch-hHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEec
Confidence 467999999999999987665 7899999876432 2235688999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCC
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 506 (642)
+++++|.+++...+ .+++.+...++.|++.||.|||+ .+++||||||+||+++.++.+||+|||++......
T Consensus 88 ~~~~~L~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd06645 88 CGGGSLQDIYHVTG-----PLSESQIAYVSRETLQGLYYLHS---KGKMHRDIKGANILLTDNGHVKLADFGVSAQITAT 159 (267)
T ss_pred cCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECcceeeeEccCc
Confidence 99999999987543 38999999999999999999999 89999999999999999999999999998765322
Q ss_pred CcccccceeeecCCCcccccCCCcccCccccc--cCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHH
Q 006522 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARI--YGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAF 584 (642)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~ 584 (642)
.. ......|+..|+|||++. ....++.++||||+||++|||++|+.||...... ..... ..
T Consensus 160 ~~------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~----~~~~~-~~ 222 (267)
T cd06645 160 IA------------KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPM----RALFL-MT 222 (267)
T ss_pred cc------------ccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccch----hhHHh-hh
Confidence 10 011345788899999853 2345789999999999999999999998643211 11111 11
Q ss_pred hccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 585 RERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 585 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
..... ....... . .....+.+++.+|++.+|++||++.++++
T Consensus 223 ~~~~~-~~~~~~~----~---~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 223 KSNFQ-PPKLKDK----M---KWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred ccCCC-CCccccc----C---CCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 11110 1111000 0 00123557899999999999999999875
No 242
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-36 Score=303.90 Aligned_cols=245 Identities=18% Similarity=0.232 Sum_probs=201.0
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCc-cccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEe
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA-TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
.+.||+|.|.+|-.++..-.+ ..||||++.+..- ......+.+|+..|+-++|||||++|++.......|||+|
T Consensus 23 ekTlG~GHFAVVKLArHVFTG-----ekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLE 97 (864)
T KOG4717|consen 23 EKTLGRGHFAVVKLARHVFTG-----EKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILE 97 (864)
T ss_pred hhhhcCCceehhhhhhhhccc-----ceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEE
Confidence 357999999999999887665 8999999988632 2223678899999999999999999999999999999999
Q ss_pred eccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeee-CCCCCeEEecccccccCC
Q 006522 426 FIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILL-DDELHPCISGFGLNRLLP 504 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl-~~~~~~kl~DfGla~~~~ 504 (642)
.-.+|+|+++|.++.. .+.+....+++.||+.|+.|+|. ..+|||||||+||.+ ..-|-+|+.|||++-.+.
T Consensus 98 LGD~GDl~DyImKHe~----Gl~E~La~kYF~QI~~AI~YCHq---LHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~ 170 (864)
T KOG4717|consen 98 LGDGGDLFDYIMKHEE----GLNEDLAKKYFAQIVHAISYCHQ---LHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQ 170 (864)
T ss_pred ecCCchHHHHHHhhhc----cccHHHHHHHHHHHHHHHHHHhh---hhhhcccCCcceeEEeeecCceEeeeccccccCC
Confidence 9999999999988765 39999999999999999999999 789999999999876 567899999999986654
Q ss_pred CCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHH
Q 006522 505 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAF 584 (642)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~ 584 (642)
.. ......+|+..|.|||++++.....++.||||+|||||-|++|+.||..+...+ . +..+.
T Consensus 171 PG-------------~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSE-T----LTmIm 232 (864)
T KOG4717|consen 171 PG-------------KKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSE-T----LTMIM 232 (864)
T ss_pred Cc-------------chhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchh-h----hhhhh
Confidence 33 223367899999999998775555689999999999999999999998654322 2 22233
Q ss_pred hccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 585 RERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 585 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
.-.+.++..++.+. -+++..++..||++|-+.+||+.
T Consensus 233 DCKYtvPshvS~eC-------------rdLI~sMLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 233 DCKYTVPSHVSKEC-------------RDLIQSMLVRDPKKRASLEEIVS 269 (864)
T ss_pred cccccCchhhhHHH-------------HHHHHHHHhcCchhhccHHHHhc
Confidence 44455555555444 34777799999999999999874
No 243
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=5.5e-36 Score=325.59 Aligned_cols=255 Identities=16% Similarity=0.215 Sum_probs=184.4
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCC------CeeeEEEEEEeC-Cc
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHP------NIVRLKAFYYAN-DE 419 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~------nIv~l~~~~~~~-~~ 419 (642)
...||+|+||.||+++....+ +.||||+++.... ..+++..|++++.+++|. +++++++++... ..
T Consensus 134 ~~~lG~G~fg~V~~a~~~~~~-----~~vAvK~i~~~~~--~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~ 206 (467)
T PTZ00284 134 LSLLGEGTFGKVVEAWDRKRK-----EYCAVKIVRNVPK--YTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGH 206 (467)
T ss_pred EEEEEeccCEEEEEEEEcCCC-----eEEEEEEEecchh--hHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCce
Confidence 468999999999999987664 8899999975322 125567788888877654 589999998865 46
Q ss_pred eEEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCC---------
Q 006522 420 KLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDEL--------- 490 (642)
Q Consensus 420 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~--------- 490 (642)
.++|||++ +++|.+++...+ .+++..+..|+.||+.||+|||+. .+|+||||||+|||++.++
T Consensus 207 ~~iv~~~~-g~~l~~~l~~~~-----~l~~~~~~~i~~qi~~aL~yLH~~--~gIiHrDlKP~NILl~~~~~~~~~~~~~ 278 (467)
T PTZ00284 207 MCIVMPKY-GPCLLDWIMKHG-----PFSHRHLAQIIFQTGVALDYFHTE--LHLMHTDLKPENILMETSDTVVDPVTNR 278 (467)
T ss_pred EEEEEecc-CCCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHhc--CCeecCCCCHHHEEEecCCccccccccc
Confidence 78999988 779999987643 489999999999999999999972 3899999999999998765
Q ss_pred -------CeEEecccccccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCC
Q 006522 491 -------HPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563 (642)
Q Consensus 491 -------~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~ 563 (642)
.+||+|||.+...... ....+||+.|+|||++. +..++.++|||||||++|||+||+
T Consensus 279 ~~~~~~~~vkl~DfG~~~~~~~~---------------~~~~~gt~~Y~APE~~~-~~~~~~~~DiwSlGvil~elltG~ 342 (467)
T PTZ00284 279 ALPPDPCRVRICDLGGCCDERHS---------------RTAIVSTRHYRSPEVVL-GLGWMYSTDMWSMGCIIYELYTGK 342 (467)
T ss_pred ccCCCCceEEECCCCccccCccc---------------cccccCCccccCcHHhh-cCCCCcHHHHHHHHHHHHHHHhCC
Confidence 4999999987542211 12457889999999955 478999999999999999999999
Q ss_pred CCCCCCCCCcccHHHHHHHHHh--------------------ccCCCccccChhhhhch------hHHHHHHHHHHHHHh
Q 006522 564 LPDAGPENDGKGLESLVRKAFR--------------------ERRPLSEVIDPALVKEI------HAKRQVLATFHIALN 617 (642)
Q Consensus 564 ~P~~~~~~~~~~l~~~~~~~~~--------------------~~~~~~~~~d~~l~~~~------~~~~~~~~~~~l~~~ 617 (642)
.||++.... .....+..... ....+....++...... ........+.+|+.+
T Consensus 343 ~pf~~~~~~--~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~ 420 (467)
T PTZ00284 343 LLYDTHDNL--EHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYG 420 (467)
T ss_pred CCCCCCChH--HHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHH
Confidence 999754321 11111111100 00000011111110000 000112356789999
Q ss_pred cCCCCCCCCCCHHHHHH
Q 006522 618 CTELDPEFRPRMRTVSE 634 (642)
Q Consensus 618 Cl~~dP~~RPs~~ev~~ 634 (642)
||+.||++|||++|+++
T Consensus 421 mL~~dP~~R~ta~e~L~ 437 (467)
T PTZ00284 421 LLHYDRQKRLNARQMTT 437 (467)
T ss_pred hCCcChhhCCCHHHHhc
Confidence 99999999999999986
No 244
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=1.5e-36 Score=315.59 Aligned_cols=199 Identities=22% Similarity=0.306 Sum_probs=167.4
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC--ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 424 (642)
...||+|+||.||++....++ +.+|+|.+.+.. .......|.+|+.++..++|+||+++++++...+..++||
T Consensus 6 ~~~lG~G~fg~V~~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 6 LKVIGRGAFGEVAVVKLKNAD-----KVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred EEEEEeCCCeEEEEEEECCCC-----CEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 467999999999999987765 789999986431 1222355889999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCC
Q 006522 425 DFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLP 504 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 504 (642)
||+++|+|.++++.... .+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 81 ey~~~g~L~~~l~~~~~----~l~~~~~~~~~~qi~~al~~lH~---~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~ 153 (332)
T cd05623 81 DYYVGGDLLTLLSKFED----RLPEDMARFYLAEMVIAIDSVHQ---LHYVHRDIKPDNILMDMNGHIRLADFGSCLKLM 153 (332)
T ss_pred eccCCCcHHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHEEECCCCCEEEeecchheecc
Confidence 99999999999976432 48999999999999999999999 899999999999999999999999999987543
Q ss_pred CCCcccccceeeecCCCcccccCCCcccCcccccc----CCCCCcccchHHHHHHHHHHHhCCCCCCC
Q 006522 505 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIY----GSKFTQKCDVYSFGIVLLEILTGRLPDAG 568 (642)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~sDV~S~Gvvl~el~tG~~P~~~ 568 (642)
.... .......||+.|+|||++.. ...++.++|||||||++|||++|+.||..
T Consensus 154 ~~~~-----------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~ 210 (332)
T cd05623 154 EDGT-----------VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYA 210 (332)
T ss_pred cCCc-----------ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCC
Confidence 2211 01113468999999998542 34678999999999999999999999974
No 245
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=2.3e-35 Score=298.15 Aligned_cols=261 Identities=21% Similarity=0.425 Sum_probs=194.6
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC-ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCC------c
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYAND------E 419 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~------~ 419 (642)
.+.||+|+||.||+|......+. .+.||||++.... .....+++.+|++++++++||||+++++++.... .
T Consensus 4 ~~~ig~g~~g~v~~~~~~~~~~~--~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 81 (273)
T cd05074 4 GRMLGKGEFGSVREAQLKSEDGS--FQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPI 81 (273)
T ss_pred hhcccCCCCCCEEeeEeeccCCC--ceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccc
Confidence 45799999999999987653221 2789999987542 2333477899999999999999999999887542 2
Q ss_pred eEEEEeeccCCcHHHHHhcCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEeccc
Q 006522 420 KLLISDFIRNGSLYAALHAGPS-DSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFG 498 (642)
Q Consensus 420 ~~lv~e~~~~gsL~~~l~~~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfG 498 (642)
.++++||+++|+|.+++..... .....+++.....++.|++.||+|||+ .+|+||||||+||++++++.+|++|||
T Consensus 82 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~nili~~~~~~kl~dfg 158 (273)
T cd05074 82 PMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSS---KNFIHRDLAARNCMLNENMTVCVADFG 158 (273)
T ss_pred eEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccchhhEEEcCCCCEEECccc
Confidence 4789999999999988754321 112248899999999999999999999 899999999999999999999999999
Q ss_pred ccccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcccHH
Q 006522 499 LNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLE 577 (642)
Q Consensus 499 la~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~~l~ 577 (642)
+++......... ......++..|++||... ...++.++|||||||++|||++ |+.||..... .
T Consensus 159 ~~~~~~~~~~~~----------~~~~~~~~~~~~~pe~~~-~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~-----~ 222 (273)
T cd05074 159 LSKKIYSGDYYR----------QGCASKLPVKWLALESLA-DNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN-----S 222 (273)
T ss_pred ccccccCCccee----------cCCCccCchhhcCHhHHh-cCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH-----H
Confidence 988654321100 001223456799999854 4678899999999999999999 8888864321 1
Q ss_pred HHHHHHHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhhh
Q 006522 578 SLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 640 (642)
Q Consensus 578 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l~ 640 (642)
........... .. ..+ .....+.+++.+||+.+|++||++.|+++.|+++.
T Consensus 223 ~~~~~~~~~~~-~~--~~~---------~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~~ 273 (273)
T cd05074 223 EIYNYLIKGNR-LK--QPP---------DCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELIW 273 (273)
T ss_pred HHHHHHHcCCc-CC--CCC---------CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhhC
Confidence 22221111111 11 001 01135667999999999999999999999999863
No 246
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=6.1e-37 Score=289.28 Aligned_cols=275 Identities=19% Similarity=0.244 Sum_probs=203.8
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCcccc-HHHHHHHHHHHhcccCCCeeeEEEEEEe-CCceEEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWR-FKDFESEVEAIARVQHPNIVRLKAFYYA-NDEKLLIS 424 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~-~~~~~~E~~~l~~l~H~nIv~l~~~~~~-~~~~~lv~ 424 (642)
...||+|.||.||++...++.+.. .+.+|+|+++...+... -....||+.+++.++|||||.+...+.+ +...++++
T Consensus 29 ig~Ig~GTYG~VykA~~~~~n~kr-~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v~l~f 107 (438)
T KOG0666|consen 29 IGKIGRGTYGKVYKAVRKNTNDKR-TKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKVWLLF 107 (438)
T ss_pred cceecccccceeeEeeeccCCccc-chhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceEEEEe
Confidence 457999999999999877664321 25899999987633322 2667899999999999999999999988 66789999
Q ss_pred eeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCC----CCeEEeccccc
Q 006522 425 DFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDE----LHPCISGFGLN 500 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~----~~~kl~DfGla 500 (642)
||.+. ||.+.|+-++......++-.....|+.||+.|+.|||+ +-|+||||||.|||+..+ |.+||+|||++
T Consensus 108 dYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~---NWvlHRDLKPaNIlvmgdgperG~VKIaDlGla 183 (438)
T KOG0666|consen 108 DYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHS---NWVLHRDLKPANILVMGDGPERGRVKIADLGLA 183 (438)
T ss_pred hhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhh---hheeeccCCcceEEEeccCCccCeeEeecccHH
Confidence 99998 99999987765544578999999999999999999999 789999999999999776 99999999999
Q ss_pred ccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcc----cH
Q 006522 501 RLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGK----GL 576 (642)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~----~l 576 (642)
+.+....... .....++.|.+|+|||.+++...||.+.||||.|||..||+|-++-|.+.+..-. .-
T Consensus 184 R~~~~plkpl---------~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq 254 (438)
T KOG0666|consen 184 RLFNNPLKPL---------ASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQ 254 (438)
T ss_pred HHhhcccccc---------ccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCch
Confidence 9876543211 1122456688999999988888899999999999999999999888876433211 11
Q ss_pred HHHHHHHHhccCCCccccChhhhh------chhH-------------HH-----HHHHHHHHHHhcCCCCCCCCCCHHHH
Q 006522 577 ESLVRKAFRERRPLSEVIDPALVK------EIHA-------------KR-----QVLATFHIALNCTELDPEFRPRMRTV 632 (642)
Q Consensus 577 ~~~~~~~~~~~~~~~~~~d~~l~~------~~~~-------------~~-----~~~~~~~l~~~Cl~~dP~~RPs~~ev 632 (642)
...+.+++.--..-.+...|.+.+ .+.. -- .....+++..+++..||.+|.|+.++
T Consensus 255 ~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qA 334 (438)
T KOG0666|consen 255 HDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQA 334 (438)
T ss_pred HHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHH
Confidence 122222222111101111111111 0000 00 01236789999999999999999998
Q ss_pred HHH
Q 006522 633 SES 635 (642)
Q Consensus 633 ~~~ 635 (642)
++.
T Consensus 335 leh 337 (438)
T KOG0666|consen 335 LEH 337 (438)
T ss_pred hcc
Confidence 763
No 247
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=1.7e-35 Score=299.76 Aligned_cols=245 Identities=22% Similarity=0.376 Sum_probs=194.1
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
...||+|+||.||+|.....+ ..||+|.+...........+.+|+.++++++||||+++++++..++..++||||
T Consensus 9 ~~~lg~g~~~~vy~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06640 9 LERIGKGSFGEVFKGIDNRTQ-----QVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEY 83 (277)
T ss_pred hhhcccCCCeEEEEEEEccCC-----EEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEec
Confidence 356999999999999987654 899999987654334457899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCC
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 506 (642)
+++|+|.+++... ++++.....++.|++.||+|||+ .+++|+||+|+||+++.++.++++|||++......
T Consensus 84 ~~~~~L~~~i~~~------~l~~~~~~~~~~~l~~~l~~lh~---~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~ 154 (277)
T cd06640 84 LGGGSALDLLRAG------PFDEFQIATMLKEILKGLDYLHS---EKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDT 154 (277)
T ss_pred CCCCcHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHh---CCccCcCCChhhEEEcCCCCEEEcccccceeccCC
Confidence 9999999998642 38889999999999999999999 89999999999999999999999999998765432
Q ss_pred CcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHhc
Q 006522 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE 586 (642)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~~ 586 (642)
.. ......++..|+|||++. +..++.++|||||||++|||+||+.||...... .........
T Consensus 155 ~~------------~~~~~~~~~~y~apE~~~-~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~-----~~~~~~~~~ 216 (277)
T cd06640 155 QI------------KRNTFVGTPFWMAPEVIQ-QSAYDSKADIWSLGITAIELAKGEPPNSDMHPM-----RVLFLIPKN 216 (277)
T ss_pred cc------------ccccccCcccccCHhHhc-cCCCccHHHHHHHHHHHHHHHHCCCCCCCcChH-----hHhhhhhcC
Confidence 10 011234677899999854 467899999999999999999999998753221 111111111
Q ss_pred cCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 006522 587 RRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSES 635 (642)
Q Consensus 587 ~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~ 635 (642)
.. +.+. ......+.+++.+||+.+|++||++.|++..
T Consensus 217 ~~-------~~~~-----~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 217 NP-------PTLT-----GEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred CC-------CCCc-----hhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 11 1111 1122346678999999999999999999763
No 248
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=2.3e-35 Score=301.29 Aligned_cols=248 Identities=20% Similarity=0.304 Sum_probs=191.9
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
...||+|+||.||+|.....+ +.+++|.+.... ....+.+.+|+.++++++||||+++++++..++..++||||
T Consensus 17 ~~~lg~g~~g~vy~~~~~~~~-----~~~~~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 90 (292)
T cd06644 17 IGELGDGAFGKVYKAKNKETG-----ALAAAKVIETKS-EEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEF 90 (292)
T ss_pred hheecCCCCeEEEEEEECCCC-----ceEEEEEeccCC-HHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEec
Confidence 456999999999999987765 789999987643 23347789999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCC
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 506 (642)
+++++|..++..... .+++..+..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++......
T Consensus 91 ~~~~~l~~~~~~~~~----~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~ 163 (292)
T cd06644 91 CPGGAVDAIMLELDR----GLTEPQIQVICRQMLEALQYLHS---MKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKT 163 (292)
T ss_pred CCCCcHHHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHhc---CCeeecCCCcceEEEcCCCCEEEccCccceecccc
Confidence 999999988865432 48999999999999999999999 89999999999999999999999999988653221
Q ss_pred CcccccceeeecCCCcccccCCCcccCcccccc----CCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHH
Q 006522 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIY----GSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRK 582 (642)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~ 582 (642)
.. ......++..|+|||++.. ...++.++|||||||++|||+||+.||..... ......
T Consensus 164 ~~------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~-----~~~~~~ 226 (292)
T cd06644 164 LQ------------RRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP-----MRVLLK 226 (292)
T ss_pred cc------------ccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccH-----HHHHHH
Confidence 10 0112346778999998542 24468899999999999999999999864221 122222
Q ss_pred HHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 583 AFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 583 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
......+ ....+. ....++.+++.+||+.+|++||++.|+++
T Consensus 227 ~~~~~~~--~~~~~~--------~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 227 IAKSEPP--TLSQPS--------KWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred HhcCCCc--cCCCCc--------ccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 2221111 111110 11124567889999999999999999975
No 249
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=1.9e-35 Score=299.00 Aligned_cols=245 Identities=22% Similarity=0.340 Sum_probs=194.4
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
...||.|++|.||++....++ ..|++|.+...........+.+|++++++++|+||+++++++......++|+||
T Consensus 6 ~~~lg~g~~~~v~~~~~~~~~-----~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (274)
T cd06609 6 LECIGKGSFGEVYKAIDKRTN-----QVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY 80 (274)
T ss_pred hhhhcCCCCeEEEEEEECCCC-----eEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence 356899999999999987654 899999987654344446789999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCC
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 506 (642)
+++++|.+++... ++++..+..++.|++.||.|||+ .+++||||+|+||++++++.++|+|||+++.....
T Consensus 81 ~~~~~L~~~~~~~------~~~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~ 151 (274)
T cd06609 81 CGGGSCLDLLKPG------KLDETYIAFILREVLLGLEYLHE---EGKIHRDIKAANILLSEEGDVKLADFGVSGQLTST 151 (274)
T ss_pred eCCCcHHHHHhhc------CCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEcccccceeeccc
Confidence 9999999999754 48999999999999999999999 89999999999999999999999999999876533
Q ss_pred CcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHhc
Q 006522 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE 586 (642)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~~ 586 (642)
.. ......++..|+|||++.. ..++.++|||||||++|||+||+.||..... ..........
T Consensus 152 ~~------------~~~~~~~~~~y~~PE~~~~-~~~~~~sDv~slG~il~~l~tg~~p~~~~~~-----~~~~~~~~~~ 213 (274)
T cd06609 152 MS------------KRNTFVGTPFWMAPEVIKQ-SGYDEKADIWSLGITAIELAKGEPPLSDLHP-----MRVLFLIPKN 213 (274)
T ss_pred cc------------ccccccCCccccChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCcccCch-----HHHHHHhhhc
Confidence 10 0113356778999998554 5689999999999999999999999975321 1111111111
Q ss_pred cCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 587 RRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 587 ~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
..+ ...+.. ....+.+++.+||..+|++||+++++++
T Consensus 214 ~~~--~~~~~~---------~~~~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 214 NPP--SLEGNK---------FSKPFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred CCC--CCcccc---------cCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 111 110000 1123556888899999999999999975
No 250
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=8.9e-36 Score=303.66 Aligned_cols=261 Identities=21% Similarity=0.283 Sum_probs=187.1
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCcc-ccHHHHHHHHHHHhcc---cCCCeeeEEEEEEeC-----
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT-WRFKDFESEVEAIARV---QHPNIVRLKAFYYAN----- 417 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l---~H~nIv~l~~~~~~~----- 417 (642)
...||+|+||.||++....++ +.||+|.++..... .....+.+|+++++++ +||||+++++++...
T Consensus 5 ~~~lg~g~~g~v~~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~ 79 (288)
T cd07863 5 VAEIGVGAYGTVYKARDPHSG-----HFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRE 79 (288)
T ss_pred eeEEeecCCeEEEEEEECCCC-----cEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCC
Confidence 356999999999999988765 89999998754221 1124566788877766 699999999998753
Q ss_pred CceEEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecc
Q 006522 418 DEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGF 497 (642)
Q Consensus 418 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~Df 497 (642)
...++||||+++ +|.+++..... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+||
T Consensus 80 ~~~~lv~e~~~~-~l~~~~~~~~~---~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dikp~Nili~~~~~~kl~df 152 (288)
T cd07863 80 TKVTLVFEHVDQ-DLRTYLDKVPP---PGLPAETIKDLMRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGQVKLADF 152 (288)
T ss_pred ceEEEEEccccc-CHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEECcc
Confidence 357899999975 89998875432 248999999999999999999999 89999999999999999999999999
Q ss_pred cccccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHH
Q 006522 498 GLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLE 577 (642)
Q Consensus 498 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~ 577 (642)
|+++...... ......||..|+|||++.. ..++.++||||+||++|||++|+.||..... ...+.
T Consensus 153 g~~~~~~~~~-------------~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~-~~~~~ 217 (288)
T cd07863 153 GLARIYSCQM-------------ALTPVVVTLWYRAPEVLLQ-STYATPVDMWSVGCIFAEMFRRKPLFCGNSE-ADQLG 217 (288)
T ss_pred CccccccCcc-------------cCCCccccccccCchHhhC-CCCCCcchhhhHHHHHHHHHhCCcCcCCCCH-HHHHH
Confidence 9987653221 0113456788999998544 6789999999999999999999999865322 11122
Q ss_pred HHHHHHHhc---cCC----C-ccccChhhhhchhH--HHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 578 SLVRKAFRE---RRP----L-SEVIDPALVKEIHA--KRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 578 ~~~~~~~~~---~~~----~-~~~~d~~l~~~~~~--~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
......... ..+ . ...+.+........ ......+.+++.+|++.||++|||+.|++.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 218 KIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred HHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 221111000 000 0 00000000000000 011234568999999999999999999874
No 251
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=1.3e-35 Score=302.90 Aligned_cols=263 Identities=16% Similarity=0.167 Sum_probs=190.2
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
.+.||+|+||.||+|.....+ ..|++|++...........+.+|++++++++|+||+++++++...+..++||||
T Consensus 10 ~~~ig~g~~~~v~~~~~~~~~-----~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07870 10 LEKLGEGSYATVYKGISRING-----QLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEY 84 (291)
T ss_pred EEEEEecCCEEEEEEEEcCCC-----cEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEec
Confidence 357999999999999987654 789999987653333335678999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCC
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 506 (642)
+. +++.+++..... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.....
T Consensus 85 ~~-~~l~~~~~~~~~----~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~ 156 (291)
T cd07870 85 MH-TDLAQYMIQHPG----GLHPYNVRLFMFQLLRGLAYIHG---QHILHRDLKPQNLLISYLGELKLADFGLARAKSIP 156 (291)
T ss_pred cc-CCHHHHHHhCCC----CCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChHHEEEcCCCcEEEeccccccccCCC
Confidence 96 688777754332 37888899999999999999999 79999999999999999999999999998754322
Q ss_pred CcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHH--
Q 006522 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAF-- 584 (642)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~-- 584 (642)
.. ......++..|+|||.+.....++.++|||||||++|||+||+.||.........+...+....
T Consensus 157 ~~------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~ 224 (291)
T cd07870 157 SQ------------TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVP 224 (291)
T ss_pred CC------------CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCC
Confidence 11 0112345778999998654456788999999999999999999999754321111111110000
Q ss_pred ---------hccCCCcccc----ChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 585 ---------RERRPLSEVI----DPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 585 ---------~~~~~~~~~~----d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
.......+.. .+.+............+.+++.+|++.||++|||+.|++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 225 TEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred ChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 0000000000 0000000000011235667899999999999999999874
No 252
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.7e-35 Score=302.66 Aligned_cols=242 Identities=17% Similarity=0.281 Sum_probs=191.5
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
...||.|++|.||++.....+ +.|++|.+..... ...+.+.+|+.+++.++||||+++++++...+..++|+||
T Consensus 24 ~~~lg~g~~g~vy~~~~~~~~-----~~v~iK~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 97 (296)
T cd06655 24 YEKIGQGASGTVFTAIDVATG-----QEVAIKQINLQKQ-PKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEY 97 (296)
T ss_pred EEEEecCCCeEEEEEEEcCCC-----cEEEEEEEecccC-chHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEe
Confidence 357999999999999876654 7899999875432 2347789999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCC
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 506 (642)
+++++|.+++... .+++.++..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++......
T Consensus 98 ~~~~~L~~~~~~~------~l~~~~~~~i~~~l~~al~~LH~---~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~ 168 (296)
T cd06655 98 LAGGSLTDVVTET------CMDEAQIAAVCRECLQALEFLHA---NQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPE 168 (296)
T ss_pred cCCCcHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEccCccchhcccc
Confidence 9999999998642 38999999999999999999999 89999999999999999999999999998765432
Q ss_pred CcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHhc
Q 006522 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE 586 (642)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~~ 586 (642)
.. ......++..|+|||.+. +..++.++|||||||++|||+||+.||...... .. .......
T Consensus 169 ~~------------~~~~~~~~~~y~aPE~~~-~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~----~~-~~~~~~~ 230 (296)
T cd06655 169 QS------------KRSTMVGTPYWMAPEVVT-RKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPL----RA-LYLIATN 230 (296)
T ss_pred cc------------cCCCcCCCccccCcchhc-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----HH-HHHHHhc
Confidence 11 011235777899999854 467889999999999999999999999753221 11 1111111
Q ss_pred cC-C--CccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 587 RR-P--LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 587 ~~-~--~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
.. . ....++ ..+.+++.+||..||++||++.+++.
T Consensus 231 ~~~~~~~~~~~~-------------~~~~~li~~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 231 GTPELQNPEKLS-------------PIFRDFLNRCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred CCcccCCcccCC-------------HHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 11 1 011111 13456888999999999999999874
No 253
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=6e-36 Score=304.26 Aligned_cols=262 Identities=15% Similarity=0.181 Sum_probs=190.3
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCc-cccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEe
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA-TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
...||+|+||.||+|.....+ +.||+|+++.... ....+.+.+|++++++++||||+++++++...+..++|+|
T Consensus 5 ~~~l~~g~~~~vy~~~~~~~g-----~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 79 (284)
T cd07839 5 LEKIGEGTYGTVFKAKNRETH-----EIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFE 79 (284)
T ss_pred EEEecccCCeEEEEEEECCCC-----cEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEe
Confidence 356899999999999987664 7899999875422 2223567889999999999999999999999999999999
Q ss_pred eccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCC
Q 006522 426 FIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPG 505 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 505 (642)
|++ ++|.+++..... .+++..+..++.||++||.|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 80 ~~~-~~l~~~~~~~~~----~~~~~~~~~~~~qi~~al~~LH~---~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 151 (284)
T cd07839 80 YCD-QDLKKYFDSCNG----DIDPEIVKSFMFQLLKGLAFCHS---HNVLHRDLKPQNLLINKNGELKLADFGLARAFGI 151 (284)
T ss_pred cCC-CCHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEEcCCCcEEECccchhhccCC
Confidence 997 588888765432 48999999999999999999999 8999999999999999999999999999875432
Q ss_pred CCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHh
Q 006522 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR 585 (642)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~ 585 (642)
... ......++..|+|||++.....++.++|||||||++|||+||..|+.........+....+ ...
T Consensus 152 ~~~------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~-~~~ 218 (284)
T cd07839 152 PVR------------CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFR-LLG 218 (284)
T ss_pred CCC------------CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHH-HhC
Confidence 210 0112345778999998655455789999999999999999999997543221111111111 000
Q ss_pred cc-----------CC--CccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 586 ER-----------RP--LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 586 ~~-----------~~--~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
.. .. ....................++.+++.+||+.||.+|||+.|+++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 219 TPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred CCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 00 00 000000000000000011235567999999999999999999875
No 254
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.3e-35 Score=302.08 Aligned_cols=250 Identities=20% Similarity=0.340 Sum_probs=192.8
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
...||+|+||.||++.....+ +.||+|.++.........++.+|+.++.+++||||+++++++...+..++||||
T Consensus 6 ~~~ig~g~~g~v~~~~~~~~~-----~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (286)
T cd06622 6 LDELGKGNYGSVYKVLHRPTG-----VTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY 80 (286)
T ss_pred hhhhcccCCeEEEEEEEcCCC-----cEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence 467999999999999987554 789999887543333347899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCC
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 506 (642)
+++++|.+++..... ...+++..+..++.|++.||.|||+. .+|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 ~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 156 (286)
T cd06622 81 MDAGSLDKLYAGGVA--TEGIPEDVLRRITYAVVKGLKFLKEE--HNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS 156 (286)
T ss_pred cCCCCHHHHHHhccc--cCCCCHHHHHHHHHHHHHHHHHHHhc--CCEeeCCCCHHHEEECCCCCEEEeecCCcccccCC
Confidence 999999999876421 12589999999999999999999962 48999999999999999999999999998765322
Q ss_pred CcccccceeeecCCCcccccCCCcccCccccccC-----CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHH
Q 006522 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIYG-----SKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVR 581 (642)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~ 581 (642)
. .....++..|+|||.+... ..++.++|||||||++|||+||+.||..... ........
T Consensus 157 ~--------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~--~~~~~~~~ 220 (286)
T cd06622 157 L--------------AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETY--ANIFAQLS 220 (286)
T ss_pred c--------------cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcch--hhHHHHHH
Confidence 1 1123467789999985332 2358899999999999999999999965322 11122222
Q ss_pred HHHhcc-CCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 582 KAFRER-RPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 582 ~~~~~~-~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
...... ..+...++ ..+.+++.+||+.+|++||++.++++
T Consensus 221 ~~~~~~~~~~~~~~~-------------~~~~~li~~~l~~~p~~Rp~~~~l~~ 261 (286)
T cd06622 221 AIVDGDPPTLPSGYS-------------DDAQDFVAKCLNKIPNRRPTYAQLLE 261 (286)
T ss_pred HHhhcCCCCCCcccC-------------HHHHHHHHHHcccCcccCCCHHHHhc
Confidence 222111 11111122 23456888899999999999999986
No 255
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-36 Score=332.48 Aligned_cols=265 Identities=25% Similarity=0.335 Sum_probs=207.7
Q ss_pred cccccCccCCceeEEEEecCCCCC--CCCeEEEEEEecCCCccccHHHHHHHHHHHhcc-cCCCeeeEEEEEEeCCceEE
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGM--GAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLL 422 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~l 422 (642)
..+.+|+|.||.|++|....-... .....||||.++........+.+..|+++|..+ +|+|||.++|+|..++..++
T Consensus 300 ~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~~~ 379 (609)
T KOG0200|consen 300 LGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPLYV 379 (609)
T ss_pred ccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCceEE
Confidence 445999999999999987644322 235789999999875556668999999999999 79999999999999999999
Q ss_pred EEeeccCCcHHHHHhcCC---------CCCC--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCC
Q 006522 423 ISDFIRNGSLYAALHAGP---------SDSL--PPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELH 491 (642)
Q Consensus 423 v~e~~~~gsL~~~l~~~~---------~~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~ 491 (642)
|+||++.|+|.++++..+ .... ..++....+.++.|||.||+||++ .+++||||..+|||+.++..
T Consensus 380 v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~---~~~vHRDLAaRNVLi~~~~~ 456 (609)
T KOG0200|consen 380 IVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLAS---VPCVHRDLAARNVLITKNKV 456 (609)
T ss_pred EEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhh---CCccchhhhhhhEEecCCCE
Confidence 999999999999998876 1111 138899999999999999999999 89999999999999999999
Q ss_pred eEEecccccccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCC
Q 006522 492 PCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPE 570 (642)
Q Consensus 492 ~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~ 570 (642)
+||+|||+++.......+..... . . .-...|||||.+.. ..|+.|+|||||||+||||+| |..||.+..
T Consensus 457 ~kIaDFGlar~~~~~~~y~~~~~---~-----~-~LP~kWmApEsl~~-~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~ 526 (609)
T KOG0200|consen 457 IKIADFGLARDHYNKDYYRTKSS---A-----G-TLPVKWMAPESLFD-RVFTSKSDVWSFGILLWEIFTLGGTPYPGIP 526 (609)
T ss_pred EEEccccceeccCCCCceEecCC---C-----C-ccceeecCHHHhcc-CcccccchhhHHHHHHHHHhhCCCCCCCCCC
Confidence 99999999997654433221100 0 0 02345999999655 889999999999999999999 999997622
Q ss_pred CCcccHHHHHHHHHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhh
Q 006522 571 NDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 639 (642)
Q Consensus 571 ~~~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l 639 (642)
. ...+.++++...+... ++. +..+++++|..||+.+|++||++.|+++.++.+
T Consensus 527 ~-~~~l~~~l~~G~r~~~--P~~-------------c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~ 579 (609)
T KOG0200|consen 527 P-TEELLEFLKEGNRMEQ--PEH-------------CSDEIYDLMKSCWNADPEDRPTFSECVEFFEKH 579 (609)
T ss_pred c-HHHHHHHHhcCCCCCC--CCC-------------CCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHH
Confidence 1 1122223333222222 122 234566799999999999999999999999874
No 256
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=1.3e-35 Score=298.48 Aligned_cols=252 Identities=21% Similarity=0.317 Sum_probs=191.9
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCc-----cccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA-----TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKL 421 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 421 (642)
...||+|+||.||+|....+ ..+|+|.+..... ....+.+.+|++++++++|+||+++++++...+..+
T Consensus 5 ~~~ig~g~~~~v~~~~~~~~------~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 78 (265)
T cd06631 5 GEVLGKGAYGTVYCGLTNQG------QLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTIS 78 (265)
T ss_pred cceEeccCCeEEEEEEEcCC------CeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEE
Confidence 46799999999999987654 7899998865321 122356889999999999999999999999999999
Q ss_pred EEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccc
Q 006522 422 LISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNR 501 (642)
Q Consensus 422 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 501 (642)
+||||+++++|.+++.... ++++..+..++.|++.||+|||+ .+|+|+||||+||++++++.+||+|||+++
T Consensus 79 lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~ 150 (265)
T cd06631 79 IFMEFVPGGSISSILNRFG-----PLPEPVFCKYTKQILDGVAYLHN---NCVVHRDIKGNNVMLMPNGIIKLIDFGCAR 150 (265)
T ss_pred EEEecCCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcCHHhEEECCCCeEEeccchhhH
Confidence 9999999999999997643 38899999999999999999999 789999999999999999999999999987
Q ss_pred cCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHH
Q 006522 502 LLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVR 581 (642)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~ 581 (642)
.......... .........|+..|+|||++. +..++.++|||||||++|||+||+.||..... ......
T Consensus 151 ~~~~~~~~~~------~~~~~~~~~~~~~~~~pe~~~-~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~----~~~~~~ 219 (265)
T cd06631 151 RLAWVGLHGT------HSNMLKSMHGTPYWMAPEVIN-ESGYGRKSDIWSIGCTVFEMATGKPPLASMDR----LAAMFY 219 (265)
T ss_pred hhhhcccccc------ccccccccCCCccccChhhhc-CCCCcchhhHHHHHHHHHHHHhCCCccccCCh----HHHHHH
Confidence 6532111000 000112345788899999854 46788999999999999999999999974322 111111
Q ss_pred HHHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 582 KAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 582 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
....... ...+... ....+.+++.+||+.+|++||++.|+++
T Consensus 220 -~~~~~~~-~~~~~~~---------~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 220 -IGAHRGL-MPRLPDS---------FSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred -hhhccCC-CCCCCCC---------CCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 1111111 1111111 1123566888999999999999999875
No 257
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=2e-35 Score=297.49 Aligned_cols=246 Identities=22% Similarity=0.332 Sum_probs=186.2
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCc----cccHHHHHHHHHHHhcccCCCeeeEEEEEEeC--Cce
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA----TWRFKDFESEVEAIARVQHPNIVRLKAFYYAN--DEK 420 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~ 420 (642)
...||+|+||.||++.....+ +.|++|++..... ....+.+.+|+.++++++||||+++++++... ...
T Consensus 7 ~~~lg~g~~g~vy~~~~~~~~-----~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 7 GKLLGQGAFGRVYLCYDVDTG-----RELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred cceecCCCCEEEEEEEEcCCC-----cEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 468999999999999987654 7899998864321 12336788999999999999999999998763 567
Q ss_pred EEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEeccccc
Q 006522 421 LLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLN 500 (642)
Q Consensus 421 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla 500 (642)
++++||+++++|.+++.... .+++.....++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~-----~l~~~~~~~~~~qi~~~l~~LH~---~~i~H~~l~p~nil~~~~~~~~l~dfg~~ 153 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYG-----ALTESVTRKYTRQILEGMSYLHS---NMIVHRDIKGANILRDSAGNVKLGDFGAS 153 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEccCCCc
Confidence 89999999999999997543 38899999999999999999998 89999999999999999999999999998
Q ss_pred ccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHH
Q 006522 501 RLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLV 580 (642)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~ 580 (642)
+........ ........++..|+|||++. +..++.++|||||||++|||+||+.||..... ... +
T Consensus 154 ~~~~~~~~~---------~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~----~~~-~ 218 (266)
T cd06651 154 KRLQTICMS---------GTGIRSVTGTPYWMSPEVIS-GEGYGRKADVWSLGCTVVEMLTEKPPWAEYEA----MAA-I 218 (266)
T ss_pred ccccccccc---------CCccccCCccccccCHHHhC-CCCCCchhhhHHHHHHHHHHHHCCCCccccch----HHH-H
Confidence 765321100 00111335778899999854 46789999999999999999999999974321 111 1
Q ss_pred HHHHhcc--CCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 581 RKAFRER--RPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 581 ~~~~~~~--~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
....... ..++..+++ .+.++ ++||..+|++||+++||++
T Consensus 219 ~~~~~~~~~~~~~~~~~~-------------~~~~l-i~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 219 FKIATQPTNPQLPSHISE-------------HARDF-LGCIFVEARHRPSAEELLR 260 (266)
T ss_pred HHHhcCCCCCCCchhcCH-------------HHHHH-HHHhcCChhhCcCHHHHhc
Confidence 1111111 111111111 11223 3688899999999999975
No 258
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=2.8e-35 Score=299.58 Aligned_cols=261 Identities=20% Similarity=0.312 Sum_probs=193.0
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCc-cccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEe
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA-TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
...||+|++|.||++.....+ +.||+|++..... ....+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 6 ~~~l~~g~~~~v~~~~~~~~~-----~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 6 LSKIGEGSYGVVFKCRNRETG-----QIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred eeeecccCCeEEEEEEECCCC-----cEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 357899999999999987654 8899999865422 2223668899999999999999999999999999999999
Q ss_pred eccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCC
Q 006522 426 FIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPG 505 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 505 (642)
|++++.|..++.... .++|..+..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++.....
T Consensus 81 ~~~~~~l~~~~~~~~-----~~~~~~~~~~~~ql~~~l~~LH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 152 (286)
T cd07847 81 YCDHTVLNELEKNPR-----GVPEHLIKKIIWQTLQAVNFCHK---HNCIHRDVKPENILITKQGQIKLCDFGFARILTG 152 (286)
T ss_pred ccCccHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHH---CCceecCCChhhEEEcCCCcEEECccccceecCC
Confidence 999988888765432 38999999999999999999999 8999999999999999999999999999986543
Q ss_pred CCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHh
Q 006522 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR 585 (642)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~ 585 (642)
... ......++..|+|||++.....++.++|||||||++|||+||+.||.+....+ .+.. ......
T Consensus 153 ~~~------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~-~~~~-~~~~~~ 218 (286)
T cd07847 153 PGD------------DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVD-QLYL-IRKTLG 218 (286)
T ss_pred Ccc------------cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHH-HHHH-HHHHhC
Confidence 211 01123456779999986554567899999999999999999999997543211 1111 111110
Q ss_pred cc----------CCC-ccccChhhh--hchh--HHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 586 ER----------RPL-SEVIDPALV--KEIH--AKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 586 ~~----------~~~-~~~~d~~l~--~~~~--~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
.. ... .....+... .... .......+.+++.+||+.+|++||++.|++.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 219 DLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred CCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 00 000 000000000 0000 0011245678999999999999999999875
No 259
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=2.9e-35 Score=294.53 Aligned_cols=246 Identities=21% Similarity=0.325 Sum_probs=192.9
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCc-cccHHHHHHHHHHHhcccCCCeeeEEEEEEeCC-ceEEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA-TWRFKDFESEVEAIARVQHPNIVRLKAFYYAND-EKLLIS 424 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~-~~~lv~ 424 (642)
.+.||+|++|.||++....++ +.|++|.+..... ....+.+.+|++++++++|+||+++++.+...+ ..++||
T Consensus 5 ~~~lg~g~~~~v~~~~~~~~~-----~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~ 79 (257)
T cd08223 5 VRVVGKGSYGEVSLVRHRTDG-----KQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVM 79 (257)
T ss_pred EEEecCCCCeEEEEEEEcCCC-----cEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEe
Confidence 467899999999999987765 7899999875422 233467889999999999999999999886544 578999
Q ss_pred eeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCC
Q 006522 425 DFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLP 504 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 504 (642)
||+++++|.+++..... ..+++.++..++.|++.|++|||+ .+++||||||+||+++.++.++|+|||+++...
T Consensus 80 e~~~~~~l~~~l~~~~~---~~l~~~~~~~~~~~l~~~l~~lH~---~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~ 153 (257)
T cd08223 80 GFCEGGDLYHKLKEQKG---KLLPENQVVEWFVQIAMALQYLHE---KHILHRDLKTQNVFLTRTNIIKVGDLGIARVLE 153 (257)
T ss_pred cccCCCcHHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCchhEEEecCCcEEEecccceEEec
Confidence 99999999999976432 248999999999999999999999 899999999999999999999999999987653
Q ss_pred CCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHH
Q 006522 505 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAF 584 (642)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~ 584 (642)
.... ......+++.|+|||++.. ..++.++||||+||++|||+||+.||.... .........
T Consensus 154 ~~~~------------~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~~l~~g~~~~~~~~-----~~~~~~~~~ 215 (257)
T cd08223 154 NQCD------------MASTLIGTPYYMSPELFSN-KPYNYKSDVWALGCCVYEMATLKHAFNAKD-----MNSLVYRII 215 (257)
T ss_pred ccCC------------ccccccCCcCccChhHhcC-CCCCchhhhHHHHHHHHHHHcCCCCCCCCC-----HHHHHHHHH
Confidence 2210 1113456788999998544 678899999999999999999999987422 223333222
Q ss_pred hccC-CCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 585 RERR-PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 585 ~~~~-~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
.... .....++ ..+.+++.+||+.+|++||++.|+++
T Consensus 216 ~~~~~~~~~~~~-------------~~~~~li~~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 216 EGKLPPMPKDYS-------------PELGELIATMLSKRPEKRPSVKSILR 253 (257)
T ss_pred hcCCCCCccccC-------------HHHHHHHHHHhccCcccCCCHHHHhc
Confidence 2221 1111122 24567888999999999999999975
No 260
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=4.1e-36 Score=301.09 Aligned_cols=252 Identities=26% Similarity=0.405 Sum_probs=196.0
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCcccc-HHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEe
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWR-FKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~-~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
.+.||+|+||.||++.....+ +.+|+|.+........ .....+|+.++++++||||+++++++......++|||
T Consensus 4 ~~~lg~G~~g~v~~~~~~~~~-----~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~ 78 (260)
T PF00069_consen 4 VKKLGSGGFGTVYKAKNKKNG-----QKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVME 78 (260)
T ss_dssp EEEEEEESSEEEEEEEETTTT-----EEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEE
T ss_pred eEEEEeCCCEEEEEEEECCCC-----eEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccc
Confidence 468999999999999998876 7999999987644322 1334569999999999999999999999999999999
Q ss_pred eccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCC
Q 006522 426 FIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPG 505 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 505 (642)
|+++++|.+++.... .+++..+..++.|+++||+|||+ .+++||||||+||++++++.++|+|||.+.....
T Consensus 79 ~~~~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~L~~Lh~---~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~ 150 (260)
T PF00069_consen 79 YCPGGSLQDYLQKNK-----PLSEEEILKIAYQILEALAYLHS---KGIVHRDIKPENILLDENGEVKLIDFGSSVKLSE 150 (260)
T ss_dssp EETTEBHHHHHHHHS-----SBBHHHHHHHHHHHHHHHHHHHH---TTEEESSBSGGGEEESTTSEEEESSGTTTEESTS
T ss_pred ccccccccccccccc-----ccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccc
Confidence 999999999998322 48999999999999999999999 8999999999999999999999999999875411
Q ss_pred CCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHh
Q 006522 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR 585 (642)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~ 585 (642)
.. .......++..|+|||+...+..++.++||||+|+++|+|++|..||... ..............
T Consensus 151 ~~------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~--~~~~~~~~~~~~~~ 216 (260)
T PF00069_consen 151 NN------------ENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEES--NSDDQLEIIEKILK 216 (260)
T ss_dssp TT------------SEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTS--SHHHHHHHHHHHHH
T ss_pred cc------------cccccccccccccccccccccccccccccccccccccccccccccccccc--cchhhhhhhhhccc
Confidence 10 11124467888999998553578899999999999999999999999754 11112222222211
Q ss_pred ccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 586 ERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 586 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
.... .... ........+.+++.+||+.||++||++.++++
T Consensus 217 ~~~~------~~~~---~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 217 RPLP------SSSQ---QSREKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp THHH------HHTT---SHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred cccc------cccc---ccchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 1100 0000 00000146778999999999999999999875
No 261
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=5.6e-36 Score=305.61 Aligned_cols=246 Identities=20% Similarity=0.282 Sum_probs=190.3
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
...||+|+||.||++.....+ ..||||.+..... ...+.+.+|+.++++++||||+++++++...+..++||||
T Consensus 27 ~~~lg~g~~g~v~~~~~~~~~-----~~vaiK~~~~~~~-~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~ 100 (292)
T cd06658 27 FIKIGEGSTGIVCIATEKHTG-----KQVAVKKMDLRKQ-QRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEF 100 (292)
T ss_pred hhcccCCCCeEEEEEEECCCC-----CEEEEEEEecchH-HHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeC
Confidence 356899999999999887654 7899999865432 2346789999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCC
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 506 (642)
+++++|.+++... .+++..+..++.||+.||+|||+ .+|+||||||+||++++++.+||+|||++......
T Consensus 101 ~~~~~L~~~~~~~------~l~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~ 171 (292)
T cd06658 101 LEGGALTDIVTHT------RMNEEQIATVCLSVLRALSYLHN---QGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKE 171 (292)
T ss_pred CCCCcHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCEEEccCcchhhcccc
Confidence 9999999988542 38899999999999999999999 89999999999999999999999999998754322
Q ss_pred CcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHhc
Q 006522 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE 586 (642)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~~ 586 (642)
.. ......|+..|+|||... +..++.++|||||||++|||++|+.||..... ..........
T Consensus 172 ~~------------~~~~~~~~~~y~aPE~~~-~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~-----~~~~~~~~~~ 233 (292)
T cd06658 172 VP------------KRKSLVGTPYWMAPEVIS-RLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPP-----LQAMRRIRDN 233 (292)
T ss_pred cc------------cCceeecCccccCHHHHc-cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHhc
Confidence 10 011235778899999854 46789999999999999999999999974321 1111111111
Q ss_pred cCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 006522 587 RRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSES 635 (642)
Q Consensus 587 ~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~ 635 (642)
..+ ...+.. .....+.+++.+||..||++|||+.|+++.
T Consensus 234 ~~~--~~~~~~--------~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 234 LPP--RVKDSH--------KVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred CCC--cccccc--------ccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 111 000000 011234457888999999999999999863
No 262
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=2.5e-35 Score=294.65 Aligned_cols=243 Identities=23% Similarity=0.375 Sum_probs=188.3
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEe
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
....||+|+||.||++... + +.||+|.++.... .+.+.+|+.++++++||||+++++++... ..++|||
T Consensus 10 ~~~~lg~g~~g~v~~~~~~-~------~~~~iK~~~~~~~---~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e 78 (254)
T cd05083 10 LGEIIGEGEFGAVLQGEYT-G------QKVAVKNIKCDVT---AQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVME 78 (254)
T ss_pred eeeeeccCCCCceEecccC-C------CceEEEeecCcch---HHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEE
Confidence 3578999999999998643 2 6799999865322 26789999999999999999999998654 5799999
Q ss_pred eccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCC
Q 006522 426 FIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPG 505 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 505 (642)
|+++|+|.+++..... ..+++..+..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||+++....
T Consensus 79 ~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~qi~~al~~lH~---~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~ 152 (254)
T cd05083 79 LMSKGNLVNFLRTRGR---ALVSVIQLLQFSLDVAEGMEYLES---KKLVHRDLAARNILVSEDGVAKVSDFGLARVGSM 152 (254)
T ss_pred CCCCCCHHHHHHhcCc---CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccCcceEEEcCCCcEEECCCccceeccc
Confidence 9999999999976543 248999999999999999999999 8999999999999999999999999999875432
Q ss_pred CCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHHH
Q 006522 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAF 584 (642)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~~l~~~~~~~~ 584 (642)
.. .....+..|+|||++. +..++.++|||||||++|||++ |+.||..... ........
T Consensus 153 ~~---------------~~~~~~~~y~~pe~~~-~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-----~~~~~~~~ 211 (254)
T cd05083 153 GV---------------DNSKLPVKWTAPEALK-HKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSL-----KEVKECVE 211 (254)
T ss_pred cC---------------CCCCCCceecCHHHhc-cCCcCchhhHHHHHHHHHHHHhCCCCCCccCCH-----HHHHHHHh
Confidence 10 0112345699999854 4678999999999999999998 9999864321 22222221
Q ss_pred hccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHh
Q 006522 585 RERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 638 (642)
Q Consensus 585 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 638 (642)
.. .. .+. .+. ....+.+++.+||+.+|++||++.++++.|++
T Consensus 212 ~~-~~-~~~-~~~---------~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 212 KG-YR-MEP-PEG---------CPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred CC-CC-CCC-CCc---------CCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 11 11 110 000 11245578899999999999999999998864
No 263
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=1.6e-35 Score=299.94 Aligned_cols=246 Identities=22% Similarity=0.340 Sum_probs=194.1
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhccc---CCCeeeEEEEEEeCCceEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ---HPNIVRLKAFYYANDEKLLI 423 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~---H~nIv~l~~~~~~~~~~~lv 423 (642)
.+.||+|+||.||+|.....+ +.|++|.+.........+++.+|+.++++++ ||||+++++++......++|
T Consensus 6 ~~~l~~g~~g~v~~~~~~~~~-----~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv 80 (277)
T cd06917 6 LELIGRGAYGAVYRGKHVPTG-----RVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWII 80 (277)
T ss_pred hhheeccCCceEEEEEEcCCC-----cEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEE
Confidence 357999999999999986654 7999999876544444577899999999997 99999999999999999999
Q ss_pred EeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccC
Q 006522 424 SDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLL 503 (642)
Q Consensus 424 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 503 (642)
|||+++++|.++++.. .+++.....++.|++.||.|||+ .+|+||||+|+||++++++.++|+|||++...
T Consensus 81 ~e~~~~~~L~~~~~~~------~l~~~~~~~i~~~i~~~l~~lh~---~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~ 151 (277)
T cd06917 81 MEYAEGGSVRTLMKAG------PIAEKYISVIIREVLVALKYIHK---VGVIHRDIKAANILVTNTGNVKLCDFGVAALL 151 (277)
T ss_pred EecCCCCcHHHHHHcc------CCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcCHHHEEEcCCCCEEEccCCceeec
Confidence 9999999999998653 38999999999999999999999 89999999999999999999999999998766
Q ss_pred CCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHH
Q 006522 504 PGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKA 583 (642)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~ 583 (642)
..... ......|+..|+|||.+..+..++.++|||||||++|||++|+.||..... .......
T Consensus 152 ~~~~~------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~-----~~~~~~~ 214 (277)
T cd06917 152 NQNSS------------KRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDA-----FRAMMLI 214 (277)
T ss_pred CCCcc------------ccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCCh-----hhhhhcc
Confidence 43310 011235778899999865555678999999999999999999999975322 1111111
Q ss_pred HhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 584 FRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 584 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
.... + +.+... .....+.+++.+||+.||++||++.|+++
T Consensus 215 ~~~~-~------~~~~~~----~~~~~~~~~i~~~l~~~p~~R~~~~~il~ 254 (277)
T cd06917 215 PKSK-P------PRLEDN----GYSKLLREFVAACLDEEPKERLSAEELLK 254 (277)
T ss_pred ccCC-C------CCCCcc----cCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence 1110 0 111110 01234667889999999999999999975
No 264
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=8.8e-36 Score=304.92 Aligned_cols=244 Identities=19% Similarity=0.278 Sum_probs=190.7
Q ss_pred cccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEeec
Q 006522 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFI 427 (642)
Q Consensus 348 ~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~ 427 (642)
..||+|+||.||++.....+ +.||+|.+...... ..+.+.+|+.+++.++||||+++++++...+..++||||+
T Consensus 27 ~~ig~g~~g~v~~~~~~~~~-----~~v~iK~~~~~~~~-~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~ 100 (297)
T cd06659 27 IKIGEGSTGIVCIAREKHSG-----RQVAVKMMDLRKQQ-RRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFL 100 (297)
T ss_pred hhcCCCCceeEEEEEEcCCC-----CEEEEEEEEecccc-hHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecC
Confidence 36899999999999987654 78999998654332 3367889999999999999999999999999999999999
Q ss_pred cCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCCC
Q 006522 428 RNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTS 507 (642)
Q Consensus 428 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 507 (642)
++++|.+++... .+++..+..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||+++......
T Consensus 101 ~~~~L~~~~~~~------~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~ 171 (297)
T cd06659 101 QGGALTDIVSQT------RLNEEQIATVCESVLQALCYLHS---QGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV 171 (297)
T ss_pred CCCCHHHHHhhc------CCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHeEEccCCcEEEeechhHhhccccc
Confidence 999999987542 38899999999999999999999 899999999999999999999999999987543221
Q ss_pred cccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHhcc
Q 006522 508 KVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRER 587 (642)
Q Consensus 508 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~~~ 587 (642)
. ......|+..|+|||++. +..++.++|||||||++|||++|+.||..... ...........
T Consensus 172 ~------------~~~~~~~~~~y~aPE~~~-~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~-----~~~~~~~~~~~ 233 (297)
T cd06659 172 P------------KRKSLVGTPYWMAPEVIS-RTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSP-----VQAMKRLRDSP 233 (297)
T ss_pred c------------cccceecCccccCHHHHc-cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHhccC
Confidence 0 111345778899999854 46789999999999999999999999974321 11112111111
Q ss_pred CCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 588 RPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 588 ~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
.+... ..+. ....+.+++.+||+.+|++||++.|+++
T Consensus 234 ~~~~~-~~~~---------~~~~l~~~i~~~l~~~P~~Rps~~~ll~ 270 (297)
T cd06659 234 PPKLK-NAHK---------ISPVLRDFLERMLTREPQERATAQELLD 270 (297)
T ss_pred CCCcc-ccCC---------CCHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 11000 0000 0123456888999999999999999987
No 265
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=1.8e-35 Score=301.07 Aligned_cols=251 Identities=24% Similarity=0.345 Sum_probs=189.6
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcc-cCCCeeeEEEEEEe-----CCce
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYA-----NDEK 420 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~-----~~~~ 420 (642)
...||+|+||.||++.....+ +.+|+|.+...... ..++.+|+.+++++ +||||+++++++.. .+..
T Consensus 23 ~~~lg~g~~~~vy~~~~~~~~-----~~~~ik~~~~~~~~--~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~ 95 (286)
T cd06638 23 IETIGKGTYGKVFKVLNKKNG-----SKAAVKILDPIHDI--DEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQL 95 (286)
T ss_pred eeeeccCCCcEEEEEEECCCC-----ceeEEEeeccccch--HHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeE
Confidence 367999999999999987765 78999987653222 26788999999999 79999999998853 3468
Q ss_pred EEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEeccccc
Q 006522 421 LLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLN 500 (642)
Q Consensus 421 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla 500 (642)
++||||+++|+|.++++..... ...+++..+..++.|+++||.|||+ .+++||||||+||++++++.+||+|||++
T Consensus 96 ~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nili~~~~~~kl~dfg~~ 171 (286)
T cd06638 96 WLVLELCNGGSVTDLVKGFLKR-GERMEEPIIAYILHEALMGLQHLHV---NKTIHRDVKGNNILLTTEGGVKLVDFGVS 171 (286)
T ss_pred EEEEeecCCCCHHHHHHHhhcc-CccccHHHHHHHHHHHHHHHHHHHh---CCccccCCCHHhEEECCCCCEEEccCCce
Confidence 9999999999999988643211 1348899999999999999999999 89999999999999999999999999998
Q ss_pred ccCCCCCcccccceeeecCCCcccccCCCcccCcccccc----CCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccH
Q 006522 501 RLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIY----GSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGL 576 (642)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l 576 (642)
+....... ......|+..|+|||++.. ...++.++||||+||++|||+||+.||..... .
T Consensus 172 ~~~~~~~~------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~----~ 235 (286)
T cd06638 172 AQLTSTRL------------RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHP----M 235 (286)
T ss_pred eecccCCC------------ccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCch----h
Confidence 76532210 1113457888999998542 24478899999999999999999999875321 1
Q ss_pred HHHHHHHHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 006522 577 ESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSES 635 (642)
Q Consensus 577 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~ 635 (642)
..+.. ...... ....++.. ....+.+++.+||+.||++|||+.|+++.
T Consensus 236 ~~~~~-~~~~~~--~~~~~~~~--------~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 236 RALFK-IPRNPP--PTLHQPEL--------WSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred HHHhh-ccccCC--CcccCCCC--------cCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 11111 111111 11112211 11245678999999999999999999874
No 266
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=1.7e-35 Score=300.38 Aligned_cols=248 Identities=20% Similarity=0.309 Sum_probs=192.6
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
...||+|++|.||++.....+ ..+|+|.+..... ...+.|.+|++++++++||||+++++++...+..++||||
T Consensus 10 ~~~l~~g~~~~v~~~~~~~~~-----~~~~iK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (280)
T cd06611 10 IGELGDGAFGKVYKAQHKETG-----LFAAAKIIQIESE-EELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF 83 (280)
T ss_pred HHHhcCCCCceEEEEEEcCCC-----cEEEEEEEeeCCH-HHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence 356899999999999987654 7899999875432 2347899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCC
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 506 (642)
+++++|.+++..... .+++..+..++.|++.||.|||+ .+|+||||||+||+++.++.++|+|||++......
T Consensus 84 ~~~~~L~~~~~~~~~----~l~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~ 156 (280)
T cd06611 84 CDGGALDSIMLELER----GLTEPQIRYVCRQMLEALNFLHS---HKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKST 156 (280)
T ss_pred cCCCcHHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEECCCCCEEEccCccchhhccc
Confidence 999999999876432 48999999999999999999999 89999999999999999999999999988654322
Q ss_pred CcccccceeeecCCCcccccCCCcccCcccccc----CCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHH
Q 006522 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIY----GSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRK 582 (642)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~ 582 (642)
.. ......++..|+|||.+.. ...++.++|||||||++|||++|+.||..... ......
T Consensus 157 ~~------------~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~-----~~~~~~ 219 (280)
T cd06611 157 LQ------------KRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNP-----MRVLLK 219 (280)
T ss_pred cc------------ccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCH-----HHHHHH
Confidence 10 1113357788999998542 24467899999999999999999999975321 122222
Q ss_pred HHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 583 AFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 583 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
......+ ....+. .....+.+++.+||+.+|++||++.++++
T Consensus 220 ~~~~~~~--~~~~~~--------~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (280)
T cd06611 220 ILKSEPP--TLDQPS--------KWSSSFNDFLKSCLVKDPDDRPTAAELLK 261 (280)
T ss_pred HhcCCCC--CcCCcc--------cCCHHHHHHHHHHhccChhhCcCHHHHhc
Confidence 2222111 000010 01123556888999999999999999975
No 267
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=3.2e-36 Score=312.95 Aligned_cols=199 Identities=22% Similarity=0.295 Sum_probs=167.3
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC--ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 424 (642)
.+.||+|+||.||+++....+ +.||+|.+.+.. .......+.+|+.++..++|+||+++++++...+..|+||
T Consensus 6 ~~~lG~G~fg~V~~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 6 IKVIGRGAFGEVAVVKMKHTE-----RIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred EEEEeeCCCeEEEEEEECCCC-----CEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 467999999999999987765 789999986531 1222356888999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCC
Q 006522 425 DFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLP 504 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 504 (642)
||+++|+|.+++..... .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 81 Ey~~gg~L~~~l~~~~~----~l~~~~~~~~~~qi~~~L~~lH~---~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 153 (331)
T cd05624 81 DYYVGGDLLTLLSKFED----RLPEDMARFYIAEMVLAIHSIHQ---LHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMN 153 (331)
T ss_pred eCCCCCcHHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCchHHEEEcCCCCEEEEeccceeecc
Confidence 99999999999976432 48899999999999999999999 899999999999999999999999999997654
Q ss_pred CCCcccccceeeecCCCcccccCCCcccCccccccC----CCCCcccchHHHHHHHHHHHhCCCCCCC
Q 006522 505 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYG----SKFTQKCDVYSFGIVLLEILTGRLPDAG 568 (642)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~sDV~S~Gvvl~el~tG~~P~~~ 568 (642)
..... ......||+.|+|||++... ..++.++|||||||++|||+||+.||..
T Consensus 154 ~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~ 210 (331)
T cd05624 154 QDGTV-----------QSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYA 210 (331)
T ss_pred CCCce-----------eeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccC
Confidence 32110 01134688999999985431 3578899999999999999999999974
No 268
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=4.6e-35 Score=293.00 Aligned_cols=248 Identities=21% Similarity=0.280 Sum_probs=196.3
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC-ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEe
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
.++||+|+||.||.+.....+ ..+++|.+.... .....+++.+|++++++++|+||+++++++.+.+..++|||
T Consensus 5 ~~~ig~g~~g~v~~~~~~~~~-----~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e 79 (256)
T cd08221 5 IRVLGKGAFGEATLYRRTEDD-----SLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEME 79 (256)
T ss_pred eeEecccCCceEEEEEEcCCC-----cEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEE
Confidence 468999999999999987765 789999886542 23334778999999999999999999999999999999999
Q ss_pred eccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCC
Q 006522 426 FIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPG 505 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 505 (642)
|+++|+|.+++..... ..+++.++..++.|++.||+|||+ .+++||||||+||++++++.+||+|||+++....
T Consensus 80 ~~~~~~L~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~ 153 (256)
T cd08221 80 YANGGTLYDKIVRQKG---QLFEEEMVLWYLFQIVSAVSYIHK---AGILHRDIKTLNIFLTKAGLIKLGDFGISKILGS 153 (256)
T ss_pred ecCCCcHHHHHHhccc---cCCCHHHHHHHHHHHHHHHHHHHh---CCccccCCChHhEEEeCCCCEEECcCcceEEccc
Confidence 9999999999976532 248999999999999999999999 7999999999999999999999999999876543
Q ss_pred CCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHh
Q 006522 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR 585 (642)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~ 585 (642)
... ......|++.|+|||+.. +..++.++||||||+++|||++|+.||.... ..........
T Consensus 154 ~~~------------~~~~~~~~~~y~ape~~~-~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~-----~~~~~~~~~~ 215 (256)
T cd08221 154 EYS------------MAETVVGTPYYMSPELCQ-GVKYNFKSDIWALGCVLYELLTLKRTFDATN-----PLNLVVKIVQ 215 (256)
T ss_pred ccc------------cccccCCCccccCHhhcC-CCCCCCcchhHHHHHHHHHHHHCCCCCCCCC-----HHHHHHHHHc
Confidence 311 011345778899999854 3668899999999999999999999986422 2233333332
Q ss_pred ccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 006522 586 ERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSES 635 (642)
Q Consensus 586 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~ 635 (642)
.... . ..+. ....+.+++.+||+.+|++||++.|+++.
T Consensus 216 ~~~~--~-~~~~---------~~~~~~~~i~~~l~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 216 GNYT--P-VVSV---------YSSELISLVHSLLQQDPEKRPTADEVLDQ 253 (256)
T ss_pred CCCC--C-Cccc---------cCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence 2211 1 1110 11235568888999999999999999875
No 269
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=5.1e-35 Score=297.93 Aligned_cols=257 Identities=22% Similarity=0.290 Sum_probs=194.8
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeC--CceEEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN--DEKLLIS 424 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~lv~ 424 (642)
.+.||.|++|.||++.....+ +.+|+|.+.........+++.+|++++++++||||++++++|... +..++||
T Consensus 6 ~~~lg~g~~~~v~~~~~~~~~-----~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 6 LSRLGEGAGGSVTKCRLKNTG-----MIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred EEEeccCCceEEEEEEECCCC-----eEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 467899999999999997654 899999987654433447799999999999999999999998754 3689999
Q ss_pred eeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCC
Q 006522 425 DFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLP 504 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 504 (642)
||+++++|.+++...... ...+++.....++.|++.||+|||+ .+++|+||+|+||++++++.++|+|||++....
T Consensus 81 e~~~~~~L~~~l~~~~~~-~~~l~~~~~~~i~~~i~~~L~~lH~---~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~ 156 (287)
T cd06621 81 EYCEGGSLDSIYKKVKKR-GGRIGEKVLGKIAESVLKGLSYLHS---RKIIHRDIKPSNILLTRKGQVKLCDFGVSGELV 156 (287)
T ss_pred EecCCCCHHHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEecCCeEEEeecccccccc
Confidence 999999999987643221 1348899999999999999999999 899999999999999999999999999986543
Q ss_pred CCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHH
Q 006522 505 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAF 584 (642)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~ 584 (642)
.... ....++..|+|||... +..++.++||||+||++|||+||+.||...........+......
T Consensus 157 ~~~~--------------~~~~~~~~y~~pE~~~-~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 221 (287)
T cd06621 157 NSLA--------------GTFTGTSFYMAPERIQ-GKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIV 221 (287)
T ss_pred cccc--------------ccccCCccccCHHHhc-CCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHh
Confidence 2210 0224566799999854 467899999999999999999999999764321112222222222
Q ss_pred hccCC-CccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 585 RERRP-LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 585 ~~~~~-~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
....+ +....... ......+.+++.+||+.+|++|||+.|+++
T Consensus 222 ~~~~~~~~~~~~~~-------~~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 222 NMPNPELKDEPGNG-------IKWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred cCCchhhccCCCCC-------CchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 21111 11111000 011234678999999999999999999986
No 270
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=7.3e-36 Score=303.94 Aligned_cols=258 Identities=20% Similarity=0.283 Sum_probs=192.9
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCcc-ccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEe
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT-WRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
.+.||+|+||.||++....++ +.||+|++...... ...+.+.+|++++++++||||+++++++...+..++|||
T Consensus 6 ~~~lg~g~~~~vy~~~~~~~~-----~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 6 LGLVGEGSYGMVMKCKHKETG-----QIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred eeeeccCCCeEEEEEEECCCC-----CEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 467999999999999987654 88999998754322 233678899999999999999999999999999999999
Q ss_pred eccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCC
Q 006522 426 FIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPG 505 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 505 (642)
|+++++|.++..... .++|..+..++.||++||+|||+ .+++||||+|+||++++++.+||+|||+++....
T Consensus 81 ~~~~~~l~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~LH~---~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~ 152 (286)
T cd07846 81 FVDHTVLDDLEKYPN-----GLDESRVRKYLFQILRGIEFCHS---HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAA 152 (286)
T ss_pred cCCccHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCcEEEEeeeeeeeccC
Confidence 999999988776432 38999999999999999999999 8999999999999999999999999999876533
Q ss_pred CCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHh
Q 006522 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR 585 (642)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~ 585 (642)
... ......++..|+|||+......++.++|||||||++|||+||+.||..... ...+ .....
T Consensus 153 ~~~------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~----~~~~-~~~~~ 215 (286)
T cd07846 153 PGE------------VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSD----IDQL-YHIIK 215 (286)
T ss_pred Ccc------------ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCch----HHHH-HHHHH
Confidence 211 011234677899999865545678899999999999999999999864321 1111 11110
Q ss_pred ccCCCc--------------cccChhhhhchh----HHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 586 ERRPLS--------------EVIDPALVKEIH----AKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 586 ~~~~~~--------------~~~d~~l~~~~~----~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
....+. ....+....... .......+.+++.+||+.+|++||++.|+++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 216 CLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred HhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 000000 000000000000 0011245778999999999999999999875
No 271
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=2.7e-35 Score=299.42 Aligned_cols=261 Identities=18% Similarity=0.259 Sum_probs=191.4
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCc-cccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEe
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA-TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
...||+|++|.||++.....+ +.|+||.+..... ....+.+.+|++++++++||||+++++++...+..++|||
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~-----~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (284)
T cd07860 5 VEKIGEGTYGVVYKARNKLTG-----EVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 79 (284)
T ss_pred eeeecCCCceEEEEEEECCCC-----CEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEee
Confidence 357899999999999987654 7899999875422 2223578899999999999999999999999999999999
Q ss_pred eccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCC
Q 006522 426 FIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPG 505 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 505 (642)
|+. ++|.+++..... ..+++..+..++.|++.||+|||+ .+++||||||+||++++++.+||+|||+++....
T Consensus 80 ~~~-~~l~~~~~~~~~---~~l~~~~~~~~~~~i~~~l~~lh~---~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~ 152 (284)
T cd07860 80 FLH-QDLKKFMDASPL---SGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV 152 (284)
T ss_pred ccc-cCHHHHHHhCCC---CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEeeccchhhccc
Confidence 996 689999876443 248999999999999999999999 8999999999999999999999999999876532
Q ss_pred CCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHh
Q 006522 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR 585 (642)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~ 585 (642)
.... .....++..|+|||++.....++.++|||||||++|||+||+.||..... ........+....
T Consensus 153 ~~~~------------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~-~~~~~~~~~~~~~ 219 (284)
T cd07860 153 PVRT------------YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE-IDQLFRIFRTLGT 219 (284)
T ss_pred Cccc------------cccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCH-HHHHHHHHHHhCC
Confidence 2100 01224567899999865544568899999999999999999999975322 1111111111100
Q ss_pred ccC--------------CCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 586 ERR--------------PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 586 ~~~--------------~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
... .........+.... ......+.+++.+||+.||++|||++|+++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 220 PDEVVWPGVTSLPDYKPSFPKWARQDFSKVV--PPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred CChhhhhhhhHHHHHHhhcccccccCHHHHc--ccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 000 00000000000000 001134567999999999999999999875
No 272
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=2.9e-35 Score=297.25 Aligned_cols=253 Identities=21% Similarity=0.336 Sum_probs=191.8
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCc---------cccHHHHHHHHHHHhcccCCCeeeEEEEEEeC
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA---------TWRFKDFESEVEAIARVQHPNIVRLKAFYYAN 417 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~---------~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~ 417 (642)
.+.||+|++|.||+|.....+ +.||+|.++.... ....+.+.+|+.++++++||||+++++++...
T Consensus 6 ~~~lg~g~~~~vy~~~~~~~~-----~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 80 (272)
T cd06629 6 GELIGKGTYGRVYLALNVTTG-----EMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTE 80 (272)
T ss_pred cceecccCceEEEEEeecCCC-----ceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccC
Confidence 467999999999999976654 7899998764211 01125688899999999999999999999999
Q ss_pred CceEEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecc
Q 006522 418 DEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGF 497 (642)
Q Consensus 418 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~Df 497 (642)
+..++||||+++|+|.++++... .+++..+..++.|++.||.|||+ .+++||||||+||+++.++.++++||
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~~-----~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~~~nil~~~~~~~~l~d~ 152 (272)
T cd06629 81 EYLSIFLEYVPGGSIGSCLRTYG-----RFEEQLVRFFTEQVLEGLAYLHS---KGILHRDLKADNLLVDADGICKISDF 152 (272)
T ss_pred CceEEEEecCCCCcHHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHhh---CCeeecCCChhhEEEcCCCeEEEeec
Confidence 99999999999999999997653 48999999999999999999999 89999999999999999999999999
Q ss_pred cccccCCCCCcccccceeeecCCCcccccCCCcccCccccccCC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccH
Q 006522 498 GLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGS-KFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGL 576 (642)
Q Consensus 498 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l 576 (642)
|+++........ .......|+..|+|||.+.... .++.++||||||+++||+++|+.||..... .
T Consensus 153 ~~~~~~~~~~~~----------~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~----~ 218 (272)
T cd06629 153 GISKKSDDIYDN----------DQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEA----I 218 (272)
T ss_pred cccccccccccc----------cccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcch----H
Confidence 998764322100 0111345778899999855432 478999999999999999999999964221 1
Q ss_pred HHHHHHHHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 577 ESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 577 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
........... ...+.+..... ....+.+++.+||+.+|++||++.||++
T Consensus 219 ~~~~~~~~~~~---~~~~~~~~~~~-----~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 219 AAMFKLGNKRS---APPIPPDVSMN-----LSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred HHHHHhhcccc---CCcCCcccccc-----CCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 22221111111 11111111111 1234566888999999999999999975
No 273
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=2e-35 Score=295.42 Aligned_cols=245 Identities=22% Similarity=0.359 Sum_probs=193.4
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
...||+|++|.||++....++ ..+++|.+..... .+++.+|++++++++||||+++++++......++++||
T Consensus 8 ~~~i~~g~~~~v~~~~~~~~~-----~~~~~k~~~~~~~---~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~ 79 (256)
T cd06612 8 LEKLGEGSYGSVYKAIHKETG-----QVVAIKVVPVEED---LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEY 79 (256)
T ss_pred hhhhcCCCCeEEEEEEEcCCC-----cEEEEEEeecHHH---HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEec
Confidence 457999999999999988754 7899999875432 47899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCC
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 506 (642)
+++++|.+++.... ..++|..+..++.|++.||.|||+ .+++||||+|+||++++++.+||+|||++......
T Consensus 80 ~~~~~L~~~l~~~~----~~l~~~~~~~~~~~l~~~l~~lh~---~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~ 152 (256)
T cd06612 80 CGAGSVSDIMKITN----KTLTEEEIAAILYQTLKGLEYLHS---NKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDT 152 (256)
T ss_pred CCCCcHHHHHHhCc----cCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEECCCCcEEEcccccchhcccC
Confidence 99999999997543 248999999999999999999999 89999999999999999999999999998865432
Q ss_pred CcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHhc
Q 006522 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE 586 (642)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~~ 586 (642)
.. ......++..|+|||++. +..++.++|||||||++|||+||+.||....... ........
T Consensus 153 ~~------------~~~~~~~~~~y~~PE~~~-~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~-----~~~~~~~~ 214 (256)
T cd06612 153 MA------------KRNTVIGTPFWMAPEVIQ-EIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMR-----AIFMIPNK 214 (256)
T ss_pred cc------------ccccccCCccccCHHHHh-cCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhh-----hhhhhccC
Confidence 10 011234677899999854 4678999999999999999999999997532211 01111000
Q ss_pred cCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 587 RRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 587 ~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
.. ...-.+ ......+.+++.+||+.||++|||+.|+++
T Consensus 215 ~~--~~~~~~--------~~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 215 PP--PTLSDP--------EKWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred CC--CCCCch--------hhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 00 000000 011134667889999999999999999975
No 274
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.5e-37 Score=311.49 Aligned_cols=247 Identities=20% Similarity=0.313 Sum_probs=195.8
Q ss_pred cccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEeec
Q 006522 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFI 427 (642)
Q Consensus 348 ~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~ 427 (642)
..||.|+||.||++..+..+ ...|-|.+.. ......++|+-||+||+.++||+||++++.|+..+..+++.|||
T Consensus 38 GELGDGAFGKVyKA~nket~-----~lAAaKvIet-kseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC 111 (1187)
T KOG0579|consen 38 GELGDGAFGKVYKAVNKETK-----LLAAAKVIET-KSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFC 111 (1187)
T ss_pred hhhcCccchhhhhhhcccch-----hhhhhhhhcc-cchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeec
Confidence 45899999999999988763 3445555543 44455689999999999999999999999999999999999999
Q ss_pred cCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCCC
Q 006522 428 RNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTS 507 (642)
Q Consensus 428 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 507 (642)
.||-...++-.-+. +|++.++..+++|++.||.|||+ +.|||||||..|||+.-+|.++++|||.+......
T Consensus 112 ~GGAVDaimlEL~r----~LtE~QIqvvc~q~ldALn~LHs---~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t- 183 (1187)
T KOG0579|consen 112 GGGAVDAIMLELGR----VLTEDQIQVVCYQVLDALNWLHS---QNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKST- 183 (1187)
T ss_pred CCchHhHHHHHhcc----ccchHHHHHHHHHHHHHHHHHhh---cchhhhhccccceEEEecCcEeeecccccccchhH-
Confidence 99999988876553 59999999999999999999999 89999999999999999999999999987543221
Q ss_pred cccccceeeecCCCcccccCCCcccCcccccc----CCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHH
Q 006522 508 KVTKNETIVTSGTGSRISAISNVYLAPEARIY----GSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKA 583 (642)
Q Consensus 508 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~ 583 (642)
........|||+|||||+... ...|+.++||||||++|.||..+.+|...- ..+..+++..
T Consensus 184 -----------~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhel----npMRVllKia 248 (1187)
T KOG0579|consen 184 -----------RQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHEL----NPMRVLLKIA 248 (1187)
T ss_pred -----------HhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCcccc----chHHHHHHHh
Confidence 112235689999999998443 367999999999999999999999997531 1123333333
Q ss_pred HhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 584 FRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 584 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
..+++. .+-| ......+-++..+|+..||+.||++.++++
T Consensus 249 KSePPT---LlqP--------S~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 249 KSEPPT---LLQP--------SHWSRSFSDFLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred hcCCCc---ccCc--------chhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence 233222 2222 234456677889999999999999999875
No 275
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.7e-35 Score=302.93 Aligned_cols=245 Identities=19% Similarity=0.308 Sum_probs=191.5
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
.+.||+|++|.||++.....+ ..||+|.+...... ..+.+.+|+.+++.++||||+++++++...+..++||||
T Consensus 24 ~~~lg~g~~g~v~~~~~~~~~-----~~vaiK~~~~~~~~-~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 97 (297)
T cd06656 24 FEKIGQGASGTVYTAIDIATG-----QEVAIKQMNLQQQP-KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 97 (297)
T ss_pred eeeeccCCCeEEEEEEECCCC-----CEEEEEEEecCccc-hHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecc
Confidence 467999999999999976554 78999998764332 236788999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCC
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 506 (642)
+++++|.+++... .+++.++..++.|++.||.|||+ .+++||||||+||+++.++.+||+|||++......
T Consensus 98 ~~~~~L~~~~~~~------~~~~~~~~~~~~~l~~~L~~LH~---~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~ 168 (297)
T cd06656 98 LAGGSLTDVVTET------CMDEGQIAAVCRECLQALDFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 168 (297)
T ss_pred cCCCCHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEECcCccceEccCC
Confidence 9999999998642 37899999999999999999999 89999999999999999999999999998765332
Q ss_pred CcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHhc
Q 006522 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE 586 (642)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~~ 586 (642)
.. ......+++.|+|||... +..++.++|||||||++|+|+||+.||........ ... ....
T Consensus 169 ~~------------~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~----~~~-~~~~ 230 (297)
T cd06656 169 QS------------KRSTMVGTPYWMAPEVVT-RKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA----LYL-IATN 230 (297)
T ss_pred cc------------CcCcccCCccccCHHHHc-CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchh----eee-eccC
Confidence 11 011235677899999854 46788999999999999999999999975332111 000 0111
Q ss_pred cCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 587 RRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 587 ~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
..+ ....+. .....+.+++.+||+.+|++||++.|+++
T Consensus 231 ~~~--~~~~~~--------~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 231 GTP--ELQNPE--------RLSAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred CCC--CCCCcc--------ccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 110 111111 01123456888999999999999999986
No 276
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=4.2e-35 Score=297.65 Aligned_cols=257 Identities=18% Similarity=0.228 Sum_probs=190.3
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhccc-CCCeeeEEEEEEeC--CceEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ-HPNIVRLKAFYYAN--DEKLLI 423 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~--~~~~lv 423 (642)
...||+|+||.||++.....+ +.||+|+++............+|+.++.++. ||||+++++++.+. +..++|
T Consensus 4 ~~~lg~g~~~~v~~~~~~~~~-----~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv 78 (282)
T cd07831 4 LGKIGEGTFSEVLKAQSRKTG-----KYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALV 78 (282)
T ss_pred EeeccccccceEEEEEEcCCC-----cEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEE
Confidence 356899999999999987654 7899999876432222244567999999995 99999999999987 889999
Q ss_pred EeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccC
Q 006522 424 SDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLL 503 (642)
Q Consensus 424 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 503 (642)
|||++ |+|.+.+..... .++|..+..++.|++.||+|||+ .+++||||||+||+++. +.+||+|||+++..
T Consensus 79 ~e~~~-~~l~~~l~~~~~----~~~~~~~~~~~~qi~~~L~~LH~---~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~ 149 (282)
T cd07831 79 FELMD-MNLYELIKGRKR----PLPEKRVKSYMYQLLKSLDHMHR---NGIFHRDIKPENILIKD-DILKLADFGSCRGI 149 (282)
T ss_pred EecCC-ccHHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHH---CCceecccCHHHEEEcC-CCeEEEeccccccc
Confidence 99997 588888875432 48999999999999999999999 89999999999999999 99999999999765
Q ss_pred CCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHH
Q 006522 504 PGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKA 583 (642)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~ 583 (642)
..... .....++..|+|||+...+..++.++||||+||++|||++|+.||..... ..........
T Consensus 150 ~~~~~-------------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~--~~~~~~~~~~ 214 (282)
T cd07831 150 YSKPP-------------YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNE--LDQIAKIHDV 214 (282)
T ss_pred ccCCC-------------cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCH--HHHHHHHHHH
Confidence 43211 01234677899999755556678999999999999999999999975322 1111111111
Q ss_pred Hhc-----------cCC----CccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 584 FRE-----------RRP----LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 584 ~~~-----------~~~----~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
... ... .+......+... .......+.+++.+||+.+|++||++.|+++
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 215 LGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKL--LPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred cCCCCHHHHHhhcccccccccCcccccccHHHH--cccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 100 000 000000000000 0112356788999999999999999999975
No 277
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=3.9e-35 Score=293.48 Aligned_cols=246 Identities=22% Similarity=0.352 Sum_probs=195.4
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC-ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEe
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
.+.||+|+||.+|++....++ +.|++|.+.... .....+++.+|+.++++++||||+++++++...+..++|||
T Consensus 5 ~~~lg~g~~g~~~~~~~~~~~-----~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08218 5 VKKIGEGSFGKAILVKSKEDG-----KQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMD 79 (256)
T ss_pred EEEeccCCceEEEEEEEcCCC-----CEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEe
Confidence 467999999999999987765 789999986532 22233688999999999999999999999999999999999
Q ss_pred eccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCC
Q 006522 426 FIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPG 505 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 505 (642)
|+++++|.+++..... ..+++.++..++.|++.||+|||+ .+++|+||+|+||+++.++.++|+|||++.....
T Consensus 80 ~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~ 153 (256)
T cd08218 80 YCEGGDLYKKINAQRG---VLFPEDQILDWFVQICLALKHVHD---RKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNS 153 (256)
T ss_pred cCCCCcHHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEEeeccceeecCc
Confidence 9999999999976432 248899999999999999999999 8999999999999999999999999999876543
Q ss_pred CCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHh
Q 006522 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR 585 (642)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~ 585 (642)
.... .....|+..|+|||+.. +..++.++|||||||++|||+||+.||... .....+.....
T Consensus 154 ~~~~------------~~~~~~~~~~~~pe~~~-~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~-----~~~~~~~~~~~ 215 (256)
T cd08218 154 TVEL------------ARTCIGTPYYLSPEICE-NRPYNNKSDIWALGCVLYEMCTLKHAFEAG-----NMKNLVLKIIR 215 (256)
T ss_pred chhh------------hhhccCCccccCHHHhC-CCCCCCccchhHHHHHHHHHHcCCCCccCC-----CHHHHHHHHhc
Confidence 2110 11234677899999854 467889999999999999999999998642 12233333332
Q ss_pred ccCC-CccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 586 ERRP-LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 586 ~~~~-~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
...+ ....+ ...+.+++.+||+.+|++||++.||++
T Consensus 216 ~~~~~~~~~~-------------~~~~~~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 216 GSYPPVSSHY-------------SYDLRNLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred CCCCCCcccC-------------CHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 2211 11111 123566888999999999999999986
No 278
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=5.4e-35 Score=292.33 Aligned_cols=245 Identities=21% Similarity=0.355 Sum_probs=193.8
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC-ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEe
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
...||+|++|.||++.....+ ..+|+|.+.... .....+.+.+|++++++++||||+++++.+...+..++|||
T Consensus 5 ~~~lg~g~~~~v~~~~~~~~~-----~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08220 5 IRVVGRGAFGIVHLCRRKADQ-----KLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVME 79 (256)
T ss_pred EEEecccCceEEEEEEEcCCC-----cEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEe
Confidence 467999999999999987654 889999987542 22334789999999999999999999999999999999999
Q ss_pred eccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCC-CCeEEecccccccCC
Q 006522 426 FIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDE-LHPCISGFGLNRLLP 504 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~-~~~kl~DfGla~~~~ 504 (642)
|+++++|.+++..... ..+++..+..++.|++.||+|||+ .+++||||||+||+++++ ..+|++|||.++...
T Consensus 80 ~~~~~~L~~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lh~---~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~ 153 (256)
T cd08220 80 YAPGGTLAEYIQKRCN---SLLDEDTILHFFVQILLALHHVHT---KLILHRDLKTQNILLDKHKMVVKIGDFGISKILS 153 (256)
T ss_pred cCCCCCHHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEEccCCCceecC
Confidence 9999999999976542 248999999999999999999999 899999999999999854 468999999987654
Q ss_pred CCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHH
Q 006522 505 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAF 584 (642)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~ 584 (642)
.... .....|+..|+|||... +..++.++||||||+++|+|++|+.||..... ........
T Consensus 154 ~~~~-------------~~~~~~~~~y~aPE~~~-~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~-----~~~~~~~~ 214 (256)
T cd08220 154 SKSK-------------AYTVVGTPCYISPELCE-GKPYNQKSDIWALGCVLYELASLKRAFEAANL-----PALVLKIM 214 (256)
T ss_pred CCcc-------------ccccccCCcccCchhcc-CCCCCcccchHHHHHHHHHHHhCCCCcccCch-----HHHHHHHH
Confidence 3210 11235677899999854 46788999999999999999999999965322 22232222
Q ss_pred hcc-CCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 585 RER-RPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 585 ~~~-~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
... .++.+.+++ .+.+++.+||+.+|++|||+.|+++
T Consensus 215 ~~~~~~~~~~~~~-------------~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 215 SGTFAPISDRYSP-------------DLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred hcCCCCCCCCcCH-------------HHHHHHHHHccCChhhCCCHHHHhh
Confidence 221 112222222 3456888899999999999999985
No 279
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=4.4e-35 Score=298.86 Aligned_cols=240 Identities=19% Similarity=0.296 Sum_probs=192.9
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC--ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 424 (642)
...||+|++|.||++.....+ +.+|+|.+.... .....+.+.+|++++++++||||+++++++...+..++||
T Consensus 6 ~~~ig~g~~~~vy~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 6 IKTLGTGSFGRVMLVRHKGSG-----KYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred EEEeecCCCeEEEEEEEcCCC-----CEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 467999999999999987754 889999987532 2223467889999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCC
Q 006522 425 DFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLP 504 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 504 (642)
||+++++|.+++.... .+++..+..++.|++.||.|||+ .+++||||||+||++++++.+||+|||+++...
T Consensus 81 e~~~~~~L~~~~~~~~-----~l~~~~~~~~~~qil~~l~~lH~---~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~ 152 (290)
T cd05580 81 EYVPGGELFSHLRKSG-----RFPEPVARFYAAQVVLALEYLHS---LDIVYRDLKPENLLLDSDGYIKITDFGFAKRVK 152 (290)
T ss_pred ecCCCCCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEECCCCCEEEeeCCCccccC
Confidence 9999999999997653 48999999999999999999999 899999999999999999999999999987653
Q ss_pred CCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHH
Q 006522 505 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAF 584 (642)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~ 584 (642)
.. .....|++.|+|||.+.. ...+.++||||||+++|||+||+.||.... .....+...
T Consensus 153 ~~---------------~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~ 211 (290)
T cd05580 153 GR---------------TYTLCGTPEYLAPEIILS-KGYGKAVDWWALGILIYEMLAGYPPFFDDN-----PIQIYEKIL 211 (290)
T ss_pred CC---------------CCCCCCCccccChhhhcC-CCCCccccHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHh
Confidence 22 113357788999998544 578899999999999999999999997532 122223333
Q ss_pred hccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCC-----CHHHHH
Q 006522 585 RERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRP-----RMRTVS 633 (642)
Q Consensus 585 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----s~~ev~ 633 (642)
.....++..+++. +.+++.+||..||.+|| +++|++
T Consensus 212 ~~~~~~~~~~~~~-------------l~~li~~~l~~~p~~R~~~~~~~~~~l~ 252 (290)
T cd05580 212 EGKVRFPSFFSPD-------------AKDLIRNLLQVDLTKRLGNLKNGVNDIK 252 (290)
T ss_pred cCCccCCccCCHH-------------HHHHHHHHccCCHHHccCcccCCHHHHH
Confidence 3333333333333 34577889999999999 666665
No 280
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=6.9e-35 Score=295.39 Aligned_cols=244 Identities=22% Similarity=0.386 Sum_probs=192.8
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
...||+|+||.||++....++ ..||+|...........+.|.+|+.++++++||||+++++++..++..++||||
T Consensus 9 ~~~ig~G~~~~vy~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06641 9 LEKIGKGSFGEVFKGIDNRTQ-----KVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY 83 (277)
T ss_pred heeEeecCCeEEEEEEECCCC-----cEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEe
Confidence 456999999999999876654 899999987554444447789999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCC
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 506 (642)
+++++|.+++... .+++..+..++.|++.|+.|||+ .+++|+||||+||+++.++.++|+|||+++.....
T Consensus 84 ~~~~~l~~~i~~~------~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~ 154 (277)
T cd06641 84 LGGGSALDLLEPG------PLDETQIATILREILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT 154 (277)
T ss_pred CCCCcHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHcc---CCeecCCCCHHhEEECCCCCEEEeecccceecccc
Confidence 9999999998642 38899999999999999999999 89999999999999999999999999998765332
Q ss_pred CcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHhc
Q 006522 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE 586 (642)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~~ 586 (642)
.. ......++..|+|||... +..++.++|||||||++|||+||..||..... ..........
T Consensus 155 ~~------------~~~~~~~~~~y~~PE~~~-~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~-----~~~~~~~~~~ 216 (277)
T cd06641 155 QI------------KRNTFVGTPFWMAPEVIK-QSAYDSKADIWSLGITAIELAKGEPPHSELHP-----MKVLFLIPKN 216 (277)
T ss_pred hh------------hhccccCCccccChhhhc-cCCCCchhhHHHHHHHHHHHHcCCCCCCccch-----HHHHHHHhcC
Confidence 10 011234677899999854 46788999999999999999999999864221 1222222111
Q ss_pred cCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 587 RRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 587 ~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
..+ .++.. ....+.+++.+||+.+|++||++.|+++
T Consensus 217 ~~~---~~~~~---------~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 252 (277)
T cd06641 217 NPP---TLEGN---------YSKPLKEFVEACLNKEPSFRPTAKELLK 252 (277)
T ss_pred CCC---CCCcc---------cCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 111 11111 1123456888899999999999999987
No 281
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=5.4e-35 Score=292.61 Aligned_cols=245 Identities=24% Similarity=0.380 Sum_probs=192.4
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCc----cccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA----TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLL 422 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 422 (642)
.+.||+|++|.||+|.....+ ..|++|.+..... ....+.+.+|++++++++||||+++++++...+..++
T Consensus 5 ~~~ig~g~~~~vy~~~~~~~~-----~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l 79 (258)
T cd06632 5 GELLGSGSFGSVYEGLNLDDG-----DFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYI 79 (258)
T ss_pred cceeeecCCceEEEEEEcCCC-----cEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEE
Confidence 467999999999999987544 7899998865431 2234678999999999999999999999999999999
Q ss_pred EEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEeccccccc
Q 006522 423 ISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRL 502 (642)
Q Consensus 423 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 502 (642)
|+||+++++|.+++.... .+++..+..++.|++.||+|||+ .+++|+||||+||+++.++.+||+|||++..
T Consensus 80 v~e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~ 151 (258)
T cd06632 80 FLELVPGGSLAKLLKKYG-----SFPEPVIRLYTRQILLGLEYLHD---RNTVHRDIKGANILVDTNGVVKLADFGMAKQ 151 (258)
T ss_pred EEEecCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEccCcccee
Confidence 999999999999997543 38899999999999999999999 8999999999999999999999999999876
Q ss_pred CCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHH
Q 006522 503 LPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRK 582 (642)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~ 582 (642)
..... ......|+..|+|||.+.....++.++|+|||||++|||++|+.||.... ........
T Consensus 152 ~~~~~-------------~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~----~~~~~~~~ 214 (258)
T cd06632 152 VVEFS-------------FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLE----GVAAVFKI 214 (258)
T ss_pred ccccc-------------cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCc----HHHHHHHH
Confidence 53321 01134577889999986543338899999999999999999999996532 11111111
Q ss_pred HH-hccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 583 AF-RERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 583 ~~-~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
.. .....+...+++ .+.+++.+||+.+|++||++.|++.
T Consensus 215 ~~~~~~~~~~~~~~~-------------~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 215 GRSKELPPIPDHLSD-------------EAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred HhcccCCCcCCCcCH-------------HHHHHHHHHhhcCcccCcCHHHHhc
Confidence 11 111111222222 3345788899999999999999875
No 282
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=5.3e-35 Score=296.30 Aligned_cols=244 Identities=20% Similarity=0.219 Sum_probs=185.6
Q ss_pred ccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCcc--ccHHHHHHHHH---HHhcccCCCeeeEEEEEEeCCceEEE
Q 006522 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT--WRFKDFESEVE---AIARVQHPNIVRLKAFYYANDEKLLI 423 (642)
Q Consensus 349 ~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~---~l~~l~H~nIv~l~~~~~~~~~~~lv 423 (642)
+||+|+||.||++.....+ +.||+|.+...... .....+..|.. .++..+||||+++++++...+..++|
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v 75 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTG-----KMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFI 75 (278)
T ss_pred CcccCCCeEEEEEEEecCC-----CEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEE
Confidence 4899999999999887654 79999998754211 11123444443 44445899999999999999999999
Q ss_pred EeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccC
Q 006522 424 SDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLL 503 (642)
Q Consensus 424 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 503 (642)
|||+++|+|.+++.... .++|..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++..
T Consensus 76 ~e~~~g~~L~~~l~~~~-----~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~di~p~nili~~~~~~kl~dfg~~~~~ 147 (278)
T cd05606 76 LDLMNGGDLHYHLSQHG-----VFSEAEMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDF 147 (278)
T ss_pred EecCCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCEEcCCCCHHHEEECCCCCEEEccCcCcccc
Confidence 99999999999886542 49999999999999999999999 89999999999999999999999999998754
Q ss_pred CCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHH
Q 006522 504 PGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKA 583 (642)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~ 583 (642)
.... .....|+..|+|||++..+..++.++||||+||++|||++|+.||....... ........
T Consensus 148 ~~~~--------------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~--~~~~~~~~ 211 (278)
T cd05606 148 SKKK--------------PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD--KHEIDRMT 211 (278)
T ss_pred CccC--------------CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccc--hHHHHHHh
Confidence 3211 1133578889999986554568999999999999999999999997542211 11111212
Q ss_pred HhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCC-----CHHHHHH
Q 006522 584 FRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRP-----RMRTVSE 634 (642)
Q Consensus 584 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----s~~ev~~ 634 (642)
......++..++ ..+.+++.+|+..+|++|| ++.|+++
T Consensus 212 ~~~~~~~~~~~s-------------~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 212 LTMAVELPDSFS-------------PELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred hccCCCCCCcCC-------------HHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence 111222222222 2345678889999999999 8988875
No 283
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=8.3e-35 Score=299.36 Aligned_cols=243 Identities=22% Similarity=0.346 Sum_probs=189.3
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC--ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 424 (642)
...||+|+||.||++....++ +.||+|.+.... .....+++.+|++++++++||||++++++|...+..++||
T Consensus 20 ~~~lg~g~~g~vy~~~~~~~~-----~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 20 LREIGHGSFGAVYFARDVRTN-----EVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred heeecCCCCeEEEEEEEcCCC-----cEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 367999999999999987654 789999886432 2223367889999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCC
Q 006522 425 DFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLP 504 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 504 (642)
||++ |++.+.+..... .+++..+..++.|++.||.|||+ .+|+||||+|+||++++++.+||+|||++....
T Consensus 95 e~~~-g~l~~~~~~~~~----~l~~~~~~~~~~ql~~~L~~LH~---~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~ 166 (307)
T cd06607 95 EYCL-GSASDILEVHKK----PLQEVEIAAICHGALQGLAYLHS---HERIHRDIKAGNILLTEPGTVKLADFGSASLVS 166 (307)
T ss_pred HhhC-CCHHHHHHHccc----CCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcccEEECCCCCEEEeecCcceecC
Confidence 9997 578777764332 48999999999999999999999 899999999999999999999999999986543
Q ss_pred CCCcccccceeeecCCCcccccCCCcccCcccccc--CCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHH
Q 006522 505 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIY--GSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRK 582 (642)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~ 582 (642)
.. ....++..|+|||++.. ...++.++||||||+++|||+||+.||..... ......
T Consensus 167 ~~----------------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~-----~~~~~~ 225 (307)
T cd06607 167 PA----------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-----MSALYH 225 (307)
T ss_pred CC----------------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccH-----HHHHHH
Confidence 21 12346678999998542 35688999999999999999999999864321 111111
Q ss_pred HHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 583 AFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 583 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
......+ . +.+ ......+.+++.+||+.+|++||++.+++.
T Consensus 226 ~~~~~~~--~-~~~--------~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 266 (307)
T cd06607 226 IAQNDSP--T-LSS--------NDWSDYFRNFVDSCLQKIPQDRPSSEELLK 266 (307)
T ss_pred HhcCCCC--C-CCc--------hhhCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 1111111 0 100 112234677889999999999999999976
No 284
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=6.9e-35 Score=296.69 Aligned_cols=260 Identities=20% Similarity=0.292 Sum_probs=195.3
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCc-cccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEe
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA-TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
...||+|++|.||+|....++ +.|++|++..... ....+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~-----~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e 79 (286)
T cd07832 5 LGRIGEGAHGIVFKAKDRETG-----ETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVME 79 (286)
T ss_pred EeecccCCCcEEEEEEECCCC-----ceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEec
Confidence 467899999999999987654 7899999876532 2234679999999999999999999999999999999999
Q ss_pred eccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCC
Q 006522 426 FIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPG 505 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 505 (642)
|+ +++|.+++.... .++++.++..++.||++||+|||+ .+++|+||||+||+++.++.++|+|||++.....
T Consensus 80 ~~-~~~L~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~ 151 (286)
T cd07832 80 YM-PSDLSEVLRDEE----RPLPEAQVKSYMRMLLKGVAYMHA---NGIMHRDLKPANLLISADGVLKIADFGLARLFSE 151 (286)
T ss_pred cc-CCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCcCHHHEEEcCCCcEEEeeeeecccccC
Confidence 99 999999987644 248999999999999999999999 8999999999999999999999999999876543
Q ss_pred CCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHh
Q 006522 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR 585 (642)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~ 585 (642)
... .......|+..|+|||.+.....++.++||||+||++|||+||+.||..... ...+. .+.....
T Consensus 152 ~~~-----------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~-~~~~~-~~~~~~~ 218 (286)
T cd07832 152 EEP-----------RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGEND-IEQLA-IVFRTLG 218 (286)
T ss_pred CCC-----------CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCH-HHHHH-HHHHHcC
Confidence 211 0011235778899999866545678999999999999999999877764321 11111 1111110
Q ss_pred ccCC-----Ccc------ccCh-----hhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 586 ERRP-----LSE------VIDP-----ALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 586 ~~~~-----~~~------~~d~-----~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
.... ..+ ...+ .+.. .. ......+.+++.+|++.+|++||+++++++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~li~~~l~~~p~~R~~~~~~l~ 281 (286)
T cd07832 219 TPNEETWPGLTSLPDYNKITFPESKPIPLEE-IF-PDASPEALDLLKGLLVYDPSKRLSAAEALR 281 (286)
T ss_pred CCChHHHhhccCcchhhcccCCCCCcchHHH-hC-CCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 0000 000 0000 0000 00 012256788999999999999999999975
No 285
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=3.8e-35 Score=298.90 Aligned_cols=262 Identities=20% Similarity=0.286 Sum_probs=194.3
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCc-cccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEe
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA-TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
...||+|++|.||++....++ +.|++|.++.... ....+.+.+|++++++++|+||+++++++...+..++|||
T Consensus 6 ~~~i~~g~~~~v~~~~~~~~~-----~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 6 LGVVGEGAYGVVLKCRNKATG-----EIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred EEEecccCCeeEEEEEeCCCC-----cEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence 467999999999999987764 7999999875422 2234778999999999999999999999999999999999
Q ss_pred eccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCC
Q 006522 426 FIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPG 505 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 505 (642)
|++++.+..+..... .+++..+..++.||+.||+|||+ .+++||||||+||++++++.+||+|||++.....
T Consensus 81 ~~~~~~l~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~ 152 (288)
T cd07833 81 YVERTLLELLEASPG-----GLPPDAVRSYIWQLLQAIAYCHS---HNIIHRDIKPENILVSESGVLKLCDFGFARALRA 152 (288)
T ss_pred cCCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCCEEEEeeecccccCC
Confidence 999877766554322 38999999999999999999999 8999999999999999999999999999877644
Q ss_pred CCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHh
Q 006522 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR 585 (642)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~ 585 (642)
... .......++..|+|||++.....++.++||||||+++|||++|+.||....... .+.. ......
T Consensus 153 ~~~-----------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~-~~~~-~~~~~~ 219 (288)
T cd07833 153 RPA-----------SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDID-QLYL-IQKCLG 219 (288)
T ss_pred Ccc-----------ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHH-HHHHhC
Confidence 321 011133567789999996653378999999999999999999999997532211 1111 111000
Q ss_pred c-----------cC-----CCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 586 E-----------RR-----PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 586 ~-----------~~-----~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
. .. ...+..++.............++.+++.+||+.+|++||+++++++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 220 PLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred CCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 0 00 0011111111100000111356788999999999999999999875
No 286
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=9e-35 Score=290.93 Aligned_cols=253 Identities=28% Similarity=0.445 Sum_probs=198.2
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
...||.|+||.||++......+ .....||+|.+.........+.+..|+.++.+++|+||+++++++...+..+++|||
T Consensus 4 ~~~lg~g~~g~v~~~~~~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e~ 82 (258)
T smart00219 4 GKKLGEGAFGEVYKGTLKGLSG-EKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVMEY 82 (258)
T ss_pred cceeccCCCcceEEEEecCCCC-CCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEec
Confidence 4578999999999999876421 233789999997654433457899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCC
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 506 (642)
+++++|.+++...... .+++.++..++.|++.||+|||+ .+++||||||+||++++++.++++|||+++.....
T Consensus 83 ~~~~~l~~~~~~~~~~---~~~~~~~~~~~~ql~~~l~~lh~---~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~ 156 (258)
T smart00219 83 MEGGDLLDYLRKNRPK---ELSLSDLLSFALQIARGMEYLES---KNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDD 156 (258)
T ss_pred cCCCCHHHHHHhhhhc---cCCHHHHHHHHHHHHHHHHHHhc---CCeeecccccceEEEccCCeEEEcccCCceecccc
Confidence 9999999999764421 28999999999999999999999 89999999999999999999999999999876543
Q ss_pred CcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHHHHh
Q 006522 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLVRKAFR 585 (642)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~~l~~~~~~~~~ 585 (642)
..... ....++..|+|||.. .+..++.++||||+|+++|||++ |+.||... ......+....
T Consensus 157 ~~~~~-----------~~~~~~~~y~~Pe~~-~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~-----~~~~~~~~~~~ 219 (258)
T smart00219 157 DYYKK-----------KGGKLPIRWMAPESL-KDGKFTSKSDVWSFGVLLWEIFTLGESPYPGM-----SNEEVLEYLKK 219 (258)
T ss_pred ccccc-----------ccCCCcccccChHHh-ccCCCCcchhHHHHHHHHHHHHhCCCCCCCCC-----CHHHHHHHHhc
Confidence 11110 012256789999985 44778999999999999999999 78888642 12223333222
Q ss_pred ccCC-CccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHH
Q 006522 586 ERRP-LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESL 636 (642)
Q Consensus 586 ~~~~-~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L 636 (642)
.... .... ...++.+++.+|++.||++|||+.|+++.|
T Consensus 220 ~~~~~~~~~-------------~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 220 GYRLPKPEN-------------CPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred CCCCCCCCc-------------CCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 2211 1111 112466688999999999999999998764
No 287
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=4.8e-35 Score=294.89 Aligned_cols=251 Identities=23% Similarity=0.358 Sum_probs=192.7
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCc-----cccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA-----TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKL 421 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 421 (642)
...||+|++|.||++....++ +.||+|.+..... ....+.+.+|++++++++|+||+++++++...+..+
T Consensus 5 ~~~lg~g~~~~v~~~~~~~~~-----~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 79 (268)
T cd06630 5 GQQLGTGAFSSCYQARDVKTG-----TLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFN 79 (268)
T ss_pred cceecCcCceEEEEEEEcCCC-----cEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEE
Confidence 467999999999999876654 7899999875321 112467899999999999999999999999999999
Q ss_pred EEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCC-CeEEeccccc
Q 006522 422 LISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDEL-HPCISGFGLN 500 (642)
Q Consensus 422 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~-~~kl~DfGla 500 (642)
+||||+++++|.+++.... ++++..+..++.|++.||+|||+ .+++||||||+||+++.++ .+||+|||.+
T Consensus 80 ~v~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~ql~~al~~LH~---~~i~H~~i~~~nil~~~~~~~~~l~dfg~~ 151 (268)
T cd06630 80 LFVEWMAGGSVSHLLSKYG-----AFKEAVIINYTEQLLRGLSYLHE---NQIIHRDVKGANLLIDSTGQRLRIADFGAA 151 (268)
T ss_pred EEEeccCCCcHHHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEEcccccc
Confidence 9999999999999997543 48899999999999999999999 8999999999999998775 5999999998
Q ss_pred ccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHH
Q 006522 501 RLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLV 580 (642)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~ 580 (642)
.......... ........|+..|+|||.+. +..++.++||||+||++|||++|+.||...... ......
T Consensus 152 ~~~~~~~~~~--------~~~~~~~~~~~~~~~PE~~~-~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~--~~~~~~ 220 (268)
T cd06630 152 ARLAAKGTGA--------GEFQGQLLGTIAFMAPEVLR-GEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHS--NHLALI 220 (268)
T ss_pred cccccccccC--------CccccccccccceeCHhHhc-cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCc--chHHHH
Confidence 7764331100 00111345778899999854 467899999999999999999999999643221 111222
Q ss_pred HHHHhc--cCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 581 RKAFRE--RRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 581 ~~~~~~--~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
...... .....+.++ ..+.+++.+|++.+|++||++.|+++
T Consensus 221 ~~~~~~~~~~~~~~~~~-------------~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 221 FKIASATTAPSIPEHLS-------------PGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred HHHhccCCCCCCchhhC-------------HHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 111111 111111222 23456888899999999999999874
No 288
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=3.4e-35 Score=294.86 Aligned_cols=250 Identities=22% Similarity=0.346 Sum_probs=194.1
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
...+|+|++|.||++....++ +.+++|.+...... ..+.+.+|++++++++||||+++++++...+..+++|||
T Consensus 8 ~~~l~~g~~~~v~~~~~~~~~-----~~~~ik~~~~~~~~-~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~ 81 (262)
T cd06613 8 IQRIGSGTYGDVYKARDIATG-----ELVAIKVIKLEPGD-DFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEY 81 (262)
T ss_pred EEEecCCCceEEEEeEecCCC-----CEEEEEEEEcCchh-hHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeC
Confidence 467899999999999987654 78999998765333 347899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCC
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 506 (642)
+++++|.+++..... .+++..+..++.|++.||+|||+ .+++|+||||+||++++++.+||+|||++......
T Consensus 82 ~~~~~l~~~~~~~~~----~l~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~ 154 (262)
T cd06613 82 CGGGSLQDIYQVTRG----PLSELQIAYVCRETLKGLAYLHE---TGKIHRDIKGANILLTEDGDVKLADFGVSAQLTAT 154 (262)
T ss_pred CCCCcHHHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHHh---CCceecCCChhhEEECCCCCEEECccccchhhhhh
Confidence 999999999876522 48999999999999999999999 89999999999999999999999999998765422
Q ss_pred CcccccceeeecCCCcccccCCCcccCccccccC--CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHH
Q 006522 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIYG--SKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAF 584 (642)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~ 584 (642)
.. ......++..|+|||..... ..++.++|||||||++|||+||+.||...... .... ...
T Consensus 155 ~~------------~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~----~~~~-~~~ 217 (262)
T cd06613 155 IA------------KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPM----RALF-LIS 217 (262)
T ss_pred hh------------ccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHH----HHHH-HHH
Confidence 10 01123567789999985432 26888999999999999999999999753211 1111 111
Q ss_pred hccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 585 RERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 585 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
........... ......++.+++.+||+.+|++|||+.|++.
T Consensus 218 ~~~~~~~~~~~--------~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 218 KSNFPPPKLKD--------KEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred hccCCCccccc--------hhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 11100000000 1112235678999999999999999999875
No 289
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=8.2e-35 Score=292.89 Aligned_cols=258 Identities=21% Similarity=0.356 Sum_probs=198.5
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
.+.||.|++|.||+|....++ ..+++|++...........+.+|+++++.++|+||+++++.+...+..++|+||
T Consensus 6 ~~~lg~g~~~~v~~~~~~~~~-----~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 6 IEVIGVGATAVVYAAICLPNN-----EKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred eeeecCCCCeEEEEEEEcCCC-----cEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence 467999999999999977654 789999987654333557899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCC
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 506 (642)
+++++|.++++..... ..+++.....++.|++.||+|||+ .+++||||||+||++++++.+||+|||++..+...
T Consensus 81 ~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~ql~~al~~lh~---~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~ 155 (267)
T cd06610 81 LSGGSLLDIMKSSYPR--GGLDEAIIATVLKEVLKGLEYLHS---NGQIHRDIKAGNILLGEDGSVKIADFGVSASLADG 155 (267)
T ss_pred cCCCcHHHHHHHhccc--CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHhEEEcCCCCEEEcccchHHHhccC
Confidence 9999999999764321 248999999999999999999999 89999999999999999999999999998776543
Q ss_pred CcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHhc
Q 006522 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE 586 (642)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~~ 586 (642)
..... .......|+..|+|||++.....++.++|||||||++|||++|+.||...... .........
T Consensus 156 ~~~~~--------~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~-----~~~~~~~~~ 222 (267)
T cd06610 156 GDRTR--------KVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPM-----KVLMLTLQN 222 (267)
T ss_pred ccccc--------cccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChh-----hhHHHHhcC
Confidence 21110 01123457888999998665447899999999999999999999999753221 112222222
Q ss_pred cCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 587 RRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 587 ~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
..+ .+.... ........+.+++.+||+.||++||++.|+++
T Consensus 223 ~~~---~~~~~~----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 223 DPP---SLETGA----DYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred CCC---CcCCcc----ccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 111 011000 00011234567889999999999999999875
No 290
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=7.7e-35 Score=297.25 Aligned_cols=250 Identities=24% Similarity=0.350 Sum_probs=190.1
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcc-cCCCeeeEEEEEEeCC-----ce
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYAND-----EK 420 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~-----~~ 420 (642)
...||+|+||.||++....++ +.+|+|.+..... ..+.+.+|+.++.++ +||||+++++++...+ ..
T Consensus 27 ~~~l~~g~~~~vy~~~~~~~~-----~~~aik~~~~~~~--~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~ 99 (291)
T cd06639 27 IETIGKGTYGKVYKVTNKKDG-----SLAAVKILDPISD--VDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQL 99 (291)
T ss_pred EEEeecCCCeEEEEEEECCCC-----CEEEEEEeccccc--HHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCee
Confidence 357999999999999987665 7899999865432 236788999999999 8999999999997643 57
Q ss_pred EEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEeccccc
Q 006522 421 LLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLN 500 (642)
Q Consensus 421 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla 500 (642)
++||||+++|+|.++++..... ...+++..+..++.|++.||+|||+ .+++||||||+||++++++.+||+|||++
T Consensus 100 ~lv~ey~~~~sL~~~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~nili~~~~~~kl~dfg~~ 175 (291)
T cd06639 100 WLVLELCNGGSVTELVKGLLIC-GQRLDEAMISYILYGALLGLQHLHN---NRIIHRDVKGNNILLTTEGGVKLVDFGVS 175 (291)
T ss_pred EEEEEECCCCcHHHHHHHhhhc-CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEEcCCCCEEEeecccc
Confidence 9999999999999998643211 1248999999999999999999999 89999999999999999999999999998
Q ss_pred ccCCCCCcccccceeeecCCCcccccCCCcccCccccccCC----CCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccH
Q 006522 501 RLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGS----KFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGL 576 (642)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l 576 (642)
+....... ......|+..|+|||++.... .++.++|||||||++|||++|+.||..... .
T Consensus 176 ~~~~~~~~------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~----~ 239 (291)
T cd06639 176 AQLTSTRL------------RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHP----V 239 (291)
T ss_pred hhcccccc------------cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcH----H
Confidence 76543211 011235677899999854322 368899999999999999999999974321 1
Q ss_pred HHHHHHHHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 577 ESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 577 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
.. +........ ....++. .....+.+++.+||+.+|++||++.|+++
T Consensus 240 ~~-~~~~~~~~~--~~~~~~~--------~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 240 KT-LFKIPRNPP--PTLLHPE--------KWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred HH-HHHHhcCCC--CCCCccc--------ccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 11 111111111 1111111 11234677999999999999999999875
No 291
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=3.8e-35 Score=303.15 Aligned_cols=272 Identities=19% Similarity=0.241 Sum_probs=194.8
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC--ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeC--CceEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN--DEKLL 422 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~l 422 (642)
...||+|++|.||+|....+ +....||+|.+.... .....+.+.+|+.++++++||||+++++++... +..++
T Consensus 5 ~~~ig~g~~g~v~~~~~~~~---~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 81 (316)
T cd07842 5 EGCIGRGTYGRVYKAKRKNG---KDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYL 81 (316)
T ss_pred EEEeccCCcEEEEEEEecCC---CCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEE
Confidence 35699999999999998762 112899999998632 112236778999999999999999999999988 78999
Q ss_pred EEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCC----CCCeEEeccc
Q 006522 423 ISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDD----ELHPCISGFG 498 (642)
Q Consensus 423 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~----~~~~kl~DfG 498 (642)
||||+++ +|.+.+..........+++..+..++.|++.||+|||+ .+|+||||||+||+++. ++.+||+|||
T Consensus 82 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg 157 (316)
T cd07842 82 LFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHS---NWVLHRDLKPANILVMGEGPERGVVKIGDLG 157 (316)
T ss_pred EEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHh---CCEeeCCCCHHHEEEcCCCCccceEEECCCc
Confidence 9999975 78777755433222358999999999999999999999 89999999999999999 9999999999
Q ss_pred ccccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcc----
Q 006522 499 LNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGK---- 574 (642)
Q Consensus 499 la~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~---- 574 (642)
+++........ ........++..|+|||++.....++.++|||||||++|||++|+.||........
T Consensus 158 ~~~~~~~~~~~---------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~ 228 (316)
T cd07842 158 LARLFNAPLKP---------LADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNP 228 (316)
T ss_pred cccccCCCccc---------ccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccch
Confidence 99875433210 00111345778899999865545688999999999999999999999976443320
Q ss_pred ----cHHHHHHHHHhc----------cCCCcc--------ccC-hhhhhchhH-HHHHHHHHHHHHhcCCCCCCCCCCHH
Q 006522 575 ----GLESLVRKAFRE----------RRPLSE--------VID-PALVKEIHA-KRQVLATFHIALNCTELDPEFRPRMR 630 (642)
Q Consensus 575 ----~l~~~~~~~~~~----------~~~~~~--------~~d-~~l~~~~~~-~~~~~~~~~l~~~Cl~~dP~~RPs~~ 630 (642)
.+..++...... ...... ... ..+...... .....++.+++.+|++.||++|||+.
T Consensus 229 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~ 308 (316)
T cd07842 229 FQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAE 308 (316)
T ss_pred hHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHH
Confidence 011111100000 000000 000 000000000 01224678899999999999999999
Q ss_pred HHHH
Q 006522 631 TVSE 634 (642)
Q Consensus 631 ev~~ 634 (642)
|+++
T Consensus 309 eil~ 312 (316)
T cd07842 309 EALE 312 (316)
T ss_pred HHhc
Confidence 9875
No 292
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=7.6e-36 Score=307.49 Aligned_cols=244 Identities=20% Similarity=0.269 Sum_probs=202.4
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCc-cccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEe
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA-TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
...||+|.|+.|..++....+ ..||+|.+++..- ......+.+|+++|..++|||||+++.+.......|+|||
T Consensus 61 ~~tig~g~f~~V~La~~~~t~-----~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~e 135 (596)
T KOG0586|consen 61 IKTIGKGNFAKVKLARHILTG-----TEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVME 135 (596)
T ss_pred eeeeccceeEEEEeeEecCCC-----ceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEEE
Confidence 467999999999999988775 8999999988632 2233558899999999999999999999999999999999
Q ss_pred eccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCC
Q 006522 426 FIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPG 505 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 505 (642)
|+.+|.+++++..+++ +.+.....++.|+.+|++|||+ +.|+|||||++||||+.++.+||+|||++..+..
T Consensus 136 ya~~ge~~~yl~~~gr-----~~e~~ar~~F~q~vsaveYcH~---k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~ 207 (596)
T KOG0586|consen 136 YASGGELFDYLVKHGR-----MKEKEARAKFRQIVSAVEYCHS---KNIVHRDLKAENILLDENMNIKIADFGFSTFFDY 207 (596)
T ss_pred eccCchhHHHHHhccc-----chhhhhhhhhHHHHHHHHHHhh---cceeccccchhhcccccccceeeeccccceeecc
Confidence 9999999999998775 4457788899999999999999 8999999999999999999999999999987653
Q ss_pred CCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHh
Q 006522 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR 585 (642)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~ 585 (642)
. ....+.+|++.|.|||++......++.+|+||+|+++|-|+.|..||++. .+...-.+...
T Consensus 208 ~-------------~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~-----~lk~Lr~rvl~ 269 (596)
T KOG0586|consen 208 G-------------LMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQ-----NLKELRPRVLR 269 (596)
T ss_pred c-------------ccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCc-----ccccccchhee
Confidence 3 12336789999999999776666789999999999999999999999853 33334444444
Q ss_pred ccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 586 ERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 586 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
....++..++-+. -+++++.+-.+|.+|++++++.+
T Consensus 270 gk~rIp~~ms~dc-------------e~lLrk~lvl~Pskr~~~dqim~ 305 (596)
T KOG0586|consen 270 GKYRIPFYMSCDC-------------EDLLRKFLVLNPSKRGPCDQIMK 305 (596)
T ss_pred eeecccceeechh-------------HHHHHHhhccCccccCCHHHhhh
Confidence 4444444444333 34677789999999999999875
No 293
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=7.5e-35 Score=299.39 Aligned_cols=263 Identities=17% Similarity=0.225 Sum_probs=195.1
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCc--cccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA--TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 424 (642)
.+.||+|+||.||++.....+ +.|++|.+..... ....+.+.+|+++++.++||||+++++++..++..++||
T Consensus 6 ~~~l~~g~~~~v~~~~~~~~~-----~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 6 IKLISNGAYGAVYLVRHKETR-----QRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred eeEeecCCCeeEEEEEECCCC-----cEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 467999999999999987765 7899999876432 223367889999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCC
Q 006522 425 DFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLP 504 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 504 (642)
||+++|+|.+++.... .+++..+..++.|++.||+|||+ .+++||||||+||+++.++.+|++|||+++...
T Consensus 81 e~~~g~~L~~~l~~~~-----~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~ 152 (305)
T cd05609 81 EYVEGGDCATLLKNIG-----ALPVDMARMYFAETVLALEYLHN---YGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGL 152 (305)
T ss_pred ecCCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCchHHEEECCCCCEEEeeCCCccccC
Confidence 9999999999997543 48999999999999999999999 899999999999999999999999999987422
Q ss_pred CCCcccccc--e-eeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHH
Q 006522 505 GTSKVTKNE--T-IVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVR 581 (642)
Q Consensus 505 ~~~~~~~~~--~-~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~ 581 (642)
......... . ............++..|+|||.+.. ..++.++|||||||++|||+||+.||.+.. ...+..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~vl~el~~g~~pf~~~~-----~~~~~~ 226 (305)
T cd05609 153 MSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILR-QGYGKPVDWWAMGIILYEFLVGCVPFFGDT-----PEELFG 226 (305)
T ss_pred cCccccccccccccchhhccccCCccCccccCchhccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHH
Confidence 111000000 0 0000001112356788999998554 678999999999999999999999997432 223333
Q ss_pred HHHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHh
Q 006522 582 KAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 638 (642)
Q Consensus 582 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 638 (642)
.........+.. ++. ....+.+++.+||+.||++||++.++.+.|+.
T Consensus 227 ~~~~~~~~~~~~-~~~---------~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 227 QVISDDIEWPEG-DEA---------LPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred HHHhcccCCCCc-ccc---------CCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 332222111110 000 11234568889999999999997666666553
No 294
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=4e-35 Score=294.98 Aligned_cols=251 Identities=24% Similarity=0.379 Sum_probs=198.4
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
.+.||+|++|.||++.....+ +.+++|++.........+++.+|++++++++||||+++++++...+..++|+||
T Consensus 6 ~~~ig~g~~~~v~~~~~~~~~-----~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (265)
T cd06605 6 LGELGAGNSGVVSKVLHRPTG-----KIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEY 80 (265)
T ss_pred HHHhcCCCCeEEEEEEEcCCC-----cEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEe
Confidence 457999999999999998654 889999987764444457899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCC
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 506 (642)
+++++|.+++.... ..+++.....++.|++.||+|||+. .+++||||||+||++++++.+||+|||.+......
T Consensus 81 ~~~~~L~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lH~~--~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~ 154 (265)
T cd06605 81 MDGGSLDKILKEVQ----GRIPERILGKIAVAVLKGLTYLHEK--HKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNS 154 (265)
T ss_pred cCCCcHHHHHHHcc----CCCCHHHHHHHHHHHHHHHHHHcCC--CCeecCCCCHHHEEECCCCCEEEeecccchhhHHH
Confidence 99999999997653 2488999999999999999999983 58999999999999999999999999998654321
Q ss_pred CcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHhc
Q 006522 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE 586 (642)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~~ 586 (642)
.. ....++..|+|||+.. +..++.++||||||+++|+|++|+.||.............++.....
T Consensus 155 ~~--------------~~~~~~~~y~~PE~~~-~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~ 219 (265)
T cd06605 155 LA--------------KTFVGTSSYMAPERIQ-GNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNE 219 (265)
T ss_pred Hh--------------hcccCChhccCHHHHc-CCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcC
Confidence 10 0135667899999854 46889999999999999999999999975433223333444433332
Q ss_pred cCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 587 RRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 587 ~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
..+. +... .....+.+++.+||..+|++|||+.|++.
T Consensus 220 ~~~~---~~~~--------~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 256 (265)
T cd06605 220 PPPR---LPSG--------KFSPDFQDFVNLCLIKDPRERPSYKELLE 256 (265)
T ss_pred CCCC---CChh--------hcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence 2211 0000 01123556888899999999999999875
No 295
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-36 Score=312.43 Aligned_cols=201 Identities=25% Similarity=0.331 Sum_probs=172.1
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeC------Cce
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN------DEK 420 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~------~~~ 420 (642)
...||+|+||.||+++.+..+ ..||||.++........+...+|+++|++++|||||++++.-... ...
T Consensus 18 ~e~LG~Ga~g~V~rgrnketG-----~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~ 92 (732)
T KOG4250|consen 18 DERLGKGAFGNVYRGRNKETG-----RLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLP 92 (732)
T ss_pred hhhhcCCccceeeeecccccc-----cchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccc
Confidence 467999999999999977765 899999998876555568889999999999999999999876543 367
Q ss_pred EEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeC----CCCCeEEec
Q 006522 421 LLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLD----DELHPCISG 496 (642)
Q Consensus 421 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~----~~~~~kl~D 496 (642)
.+|||||.+|||+..|.+-... ..|++.+.+.+..+++.||.|||+ ++|+||||||.||++- ....-||+|
T Consensus 93 vlvmEyC~gGsL~~~L~~PEN~--~GLpE~e~l~lL~d~~~al~~LrE---n~IvHRDlKP~NIvl~~Gedgq~IyKLtD 167 (732)
T KOG4250|consen 93 VLVMEYCSGGSLRKVLNSPENA--YGLPESEFLDLLSDLVSALRHLRE---NGIVHRDLKPGNIVLQIGEDGQSIYKLTD 167 (732)
T ss_pred eEEEeecCCCcHHHHhcCcccc--cCCCHHHHHHHHHHHHHHHHHHHH---cCceeccCCCCcEEEeecCCCceEEeeec
Confidence 8999999999999999865432 459999999999999999999999 8999999999999983 334579999
Q ss_pred ccccccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCC
Q 006522 497 FGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPE 570 (642)
Q Consensus 497 fGla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~ 570 (642)
||.||.+.+.. .-+..+||..|.+||.+.....|+..+|.|||||++||++||..||-...
T Consensus 168 fG~Arel~d~s-------------~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~ 228 (732)
T KOG4250|consen 168 FGAARELDDNS-------------LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFG 228 (732)
T ss_pred ccccccCCCCC-------------eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCC
Confidence 99999887653 12367899999999986544789999999999999999999999997543
No 296
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=6.6e-35 Score=295.53 Aligned_cols=243 Identities=23% Similarity=0.278 Sum_probs=187.2
Q ss_pred cCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC--ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEeec
Q 006522 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFI 427 (642)
Q Consensus 350 lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~ 427 (642)
||+|+||.||++.....+ +.+|+|.+.... .....+.+.+|++++++++||||+++++++...+..++||||+
T Consensus 1 lg~g~~g~vy~~~~~~~~-----~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 75 (277)
T cd05577 1 LGKGGFGEVCACQVKATG-----KMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLM 75 (277)
T ss_pred CCCCCceeEEEEEEcCCC-----cEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecC
Confidence 689999999999877654 789999986532 1222356788999999999999999999999999999999999
Q ss_pred cCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCCC
Q 006522 428 RNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTS 507 (642)
Q Consensus 428 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 507 (642)
++++|.+++..... ..+++..+..++.|++.||.|||+ .+++||||||+||++++++.+||+|||++.......
T Consensus 76 ~~~~L~~~l~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~---~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 149 (277)
T cd05577 76 NGGDLKYHIYNVGE---PGFPEARAIFYAAQIICGLEHLHQ---RRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGK 149 (277)
T ss_pred CCCcHHHHHHHcCc---CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEccCcchhhhccCC
Confidence 99999999976543 248999999999999999999999 899999999999999999999999999987653211
Q ss_pred cccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHhcc
Q 006522 508 KVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRER 587 (642)
Q Consensus 508 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~~~ 587 (642)
. .....++..|+|||+... ..++.++||||+||++|+|++|+.||...... ..............
T Consensus 150 ~-------------~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~ 214 (277)
T cd05577 150 K-------------IKGRAGTPGYMAPEVLQG-EVYDFSVDWFALGCTLYEMIAGRSPFRQRKEK-VEKEELKRRTLEMA 214 (277)
T ss_pred c-------------cccccCCCCcCCHHHhcC-CCCCchhhhHHHHHHHHHHhhCCCCCCCCccc-ccHHHHHhcccccc
Confidence 0 112346678999998554 56889999999999999999999999754321 11112222111112
Q ss_pred CCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHH
Q 006522 588 RPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRT 631 (642)
Q Consensus 588 ~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~e 631 (642)
......+++ .+.+++.+||+.||++||+.+|
T Consensus 215 ~~~~~~~~~-------------~~~~li~~~l~~~p~~R~~~~~ 245 (277)
T cd05577 215 VEYPDKFSP-------------EAKDLCEALLQKDPEKRLGCRG 245 (277)
T ss_pred ccCCccCCH-------------HHHHHHHHHccCChhHccCCCc
Confidence 122222333 3345788899999999994443
No 297
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=4e-35 Score=298.00 Aligned_cols=250 Identities=19% Similarity=0.306 Sum_probs=187.7
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHH-HhcccCCCeeeEEEEEEeCCceEEEEe
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEA-IARVQHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~-l~~l~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
...||+|+||.||++....++ +.||+|+++.........++..|+.+ ++..+||||+++++++..++..++|||
T Consensus 6 ~~~ig~g~~g~v~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 6 IEELGRGAYGVVDKMRHVPTG-----TIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME 80 (283)
T ss_pred EEEecccCCeEEEEEEEcCCC-----cEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence 357899999999999987654 89999998765333233566677775 556699999999999999999999999
Q ss_pred eccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CceecCCCCCCeeeCCCCCeEEecccccccCC
Q 006522 426 FIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPR-KYVHGNIKSTKILLDDELHPCISGFGLNRLLP 504 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~-~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 504 (642)
|++ |+|.+++....... ..+++..+..++.||+.||+|||+ + +++||||||+||+++.++.+||+|||+++...
T Consensus 81 ~~~-~~l~~~l~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~---~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~ 155 (283)
T cd06617 81 VMD-TSLDKFYKKVYDKG-LTIPEDILGKIAVSIVKALEYLHS---KLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLV 155 (283)
T ss_pred hhc-ccHHHHHHHhccCC-CCCCHHHHHHHHHHHHHHHHHHhh---cCCeecCCCCHHHEEECCCCCEEEeecccccccc
Confidence 997 68988886543222 359999999999999999999998 5 89999999999999999999999999987653
Q ss_pred CCCcccccceeeecCCCcccccCCCcccCccccccC---CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHH
Q 006522 505 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYG---SKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVR 581 (642)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~ 581 (642)
... ......|+..|+|||.+... ..++.++|||||||++|||++|+.||...... .. ...
T Consensus 156 ~~~-------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---~~-~~~ 218 (283)
T cd06617 156 DSV-------------AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTP---FQ-QLK 218 (283)
T ss_pred ccc-------------ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccC---HH-HHH
Confidence 211 01123467789999975431 34688999999999999999999999642221 11 122
Q ss_pred HHHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 582 KAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 582 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
.......+ ...... ....+.+++.+||..+|++||++.|+++
T Consensus 219 ~~~~~~~~--~~~~~~---------~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 219 QVVEEPSP--QLPAEK---------FSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred HHHhcCCC--CCCccc---------cCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 22221111 110000 1124566888999999999999999985
No 298
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=8.1e-35 Score=292.83 Aligned_cols=248 Identities=20% Similarity=0.288 Sum_probs=187.4
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC----ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeC--Cce
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD----ATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN--DEK 420 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~ 420 (642)
.+.||+|+||.||++.....+ +.|++|.+.... .....+.+.+|+.++++++||||+++++++.+. ...
T Consensus 7 ~~~l~~g~~g~v~~~~~~~~~-----~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 7 GKLLGQGAFGRVYLCYDADTG-----RELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred eeEEecCCceEEEEEEEcCCC-----cEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 568999999999999987765 799999886431 112346788999999999999999999998764 457
Q ss_pred EEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEeccccc
Q 006522 421 LLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLN 500 (642)
Q Consensus 421 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla 500 (642)
++||||+++|+|.+++.... .+++....+++.|++.||+|||+ .+++|+||||+||+++.++.+||+|||++
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~l~Dfg~~ 153 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYG-----ALTENVTRKYTRQILEGVSYLHS---NMIVHRDIKGANILRDSVGNVKLGDFGAS 153 (265)
T ss_pred EEEEEecCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEecCCCCEEECcCccc
Confidence 89999999999999987543 37889999999999999999999 89999999999999999999999999998
Q ss_pred ccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHH
Q 006522 501 RLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLV 580 (642)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~ 580 (642)
+........ ........|+..|+|||.+. +..++.++|||||||++|||++|+.||.... .....
T Consensus 154 ~~~~~~~~~---------~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Dv~slG~il~el~~g~~p~~~~~----~~~~~- 218 (265)
T cd06652 154 KRLQTICLS---------GTGMKSVTGTPYWMSPEVIS-GEGYGRKADIWSVGCTVVEMLTEKPPWAEFE----AMAAI- 218 (265)
T ss_pred ccccccccc---------ccccccCCCCccccChhhhc-CCCCCcchhHHHHHHHHHHHhhCCCCCCccc----hHHHH-
Confidence 765322100 00111345778899999854 4678999999999999999999999996421 11222
Q ss_pred HHHHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 581 RKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 581 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
........ ...+.+. ....+.+++.+|+. +|++||++.|+++
T Consensus 219 ~~~~~~~~--~~~~~~~---------~~~~~~~~i~~~l~-~p~~Rp~~~~il~ 260 (265)
T cd06652 219 FKIATQPT--NPVLPPH---------VSDHCRDFLKRIFV-EAKLRPSADELLR 260 (265)
T ss_pred HHHhcCCC--CCCCchh---------hCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence 11111111 1111111 11234557777884 8999999999875
No 299
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=9.8e-35 Score=291.68 Aligned_cols=242 Identities=20% Similarity=0.284 Sum_probs=192.3
Q ss_pred cCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCc--cccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEeec
Q 006522 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA--TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFI 427 (642)
Q Consensus 350 lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~ 427 (642)
||+|++|.||+++....+ +.+++|.+..... ....+.+.+|+.++++++||||+++++++..++..++|+||+
T Consensus 1 lg~g~~~~v~~~~~~~~~-----~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 75 (262)
T cd05572 1 LGVGGFGRVELVKVKSKN-----RTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYC 75 (262)
T ss_pred CCCCCceEEEEEEECCCC-----cEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecC
Confidence 689999999999987654 8999999875422 233467999999999999999999999999999999999999
Q ss_pred cCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCCC
Q 006522 428 RNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTS 507 (642)
Q Consensus 428 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 507 (642)
++++|.+++.... .+++..+..++.|++.||+|||+ .+++|+||||+||+++.++.+||+|||+++......
T Consensus 76 ~~~~L~~~l~~~~-----~l~~~~~~~~~~~i~~~l~~lH~---~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~ 147 (262)
T cd05572 76 LGGELWTILRDRG-----LFDEYTARFYIACVVLAFEYLHN---RGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ 147 (262)
T ss_pred CCCcHHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc
Confidence 9999999997643 38899999999999999999999 899999999999999999999999999988664321
Q ss_pred cccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHh--
Q 006522 508 KVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR-- 585 (642)
Q Consensus 508 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~-- 585 (642)
......++..|++||.+. +..++.++|+||+|+++|||++|+.||.....+ ..........
T Consensus 148 -------------~~~~~~~~~~~~~PE~~~-~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~~~~~~~~~~ 210 (262)
T cd05572 148 -------------KTWTFCGTPEYVAPEIIL-NKGYDFSVDYWSLGILLYELLTGRPPFGEDDED---PMEIYNDILKGN 210 (262)
T ss_pred -------------ccccccCCcCccChhHhc-CCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCC---HHHHHHHHhccC
Confidence 011235677899999854 467899999999999999999999999764321 2223333321
Q ss_pred ccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCC-----HHHHHH
Q 006522 586 ERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPR-----MRTVSE 634 (642)
Q Consensus 586 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs-----~~ev~~ 634 (642)
.....+...+ ..+.+++.+||+.+|++||+ ++|+++
T Consensus 211 ~~~~~~~~~~-------------~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 211 GKLEFPNYID-------------KAAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred CCCCCCcccC-------------HHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 1111122222 24566888899999999999 666654
No 300
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=3.9e-35 Score=298.91 Aligned_cols=252 Identities=21% Similarity=0.300 Sum_probs=189.2
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhccc-CCCeeeEEEEEEeCCceEEEEe
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ-HPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lv~e 425 (642)
...||+|+||.||++.....+ +.+|+|.+...........+.+|+.++.++. ||||+++++++...+..+++||
T Consensus 9 ~~~lg~G~~g~vy~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e 83 (288)
T cd06616 9 LGEIGRGAFGTVNKMLHKPSG-----TIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICME 83 (288)
T ss_pred HHHhCCCCceEEEEEEECCCC-----CEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEe
Confidence 467999999999999987765 8999999876543334467899999999996 9999999999999899999999
Q ss_pred eccCCcHHHHH---hcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEeccccccc
Q 006522 426 FIRNGSLYAAL---HAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRL 502 (642)
Q Consensus 426 ~~~~gsL~~~l---~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 502 (642)
|+.. ++.++. ..... ..+++.....++.|++.||+|||+. .+++||||||+||+++.++.+||+|||+++.
T Consensus 84 ~~~~-~l~~l~~~~~~~~~---~~l~~~~~~~i~~~i~~~l~~lh~~--~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~ 157 (288)
T cd06616 84 LMDI-SLDKFYKYVYEVLK---SVIPEEILGKIAVATVKALNYLKEE--LKIIHRDVKPSNILLDRNGNIKLCDFGISGQ 157 (288)
T ss_pred cccC-CHHHHHHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHhhc--CCeeccCCCHHHEEEccCCcEEEeecchhHH
Confidence 9864 554433 22221 3489999999999999999999972 4899999999999999999999999999876
Q ss_pred CCCCCcccccceeeecCCCcccccCCCcccCccccccC--CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHH
Q 006522 503 LPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYG--SKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLV 580 (642)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~ 580 (642)
...... .....|+..|+|||++... ..++.++|||||||++|||++|+.||.... .....+
T Consensus 158 ~~~~~~-------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~----~~~~~~ 220 (288)
T cd06616 158 LVDSIA-------------KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN----SVFDQL 220 (288)
T ss_pred hccCCc-------------cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc----hHHHHH
Confidence 532210 0123467789999986543 368999999999999999999999996432 111222
Q ss_pred HHHHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 581 RKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 581 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
........+ .+.+... .....++.+++.+||+.+|++|||+.||++
T Consensus 221 ~~~~~~~~~---~~~~~~~-----~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~ 266 (288)
T cd06616 221 TQVVKGDPP---ILSNSEE-----REFSPSFVNFINLCLIKDESKRPKYKELLE 266 (288)
T ss_pred hhhcCCCCC---cCCCcCC-----CccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 222211111 1111100 012235677899999999999999999886
No 301
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=1.1e-34 Score=294.85 Aligned_cols=262 Identities=17% Similarity=0.259 Sum_probs=195.4
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
.+.||+|++|.||+|....++ ..||||.++........+.+.+|++++++++||||+++++++...+..++||||
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~-----~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 79 (284)
T cd07836 5 LEKLGEGTYATVYKGRNRTTG-----EIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEY 79 (284)
T ss_pred eeeeccCCceEEEEEEECCCC-----eEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEec
Confidence 467899999999999987654 789999997654443446788999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCC
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 506 (642)
+++ +|.+++...... ..+++..+..++.|++.||+|||+ .+++||||||+||++++++.+|++|||+++.....
T Consensus 80 ~~~-~l~~~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~---~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~ 153 (284)
T cd07836 80 MDK-DLKKYMDTHGVR--GALDPNTVKSFTYQLLKGIAFCHE---NRVLHRDLKPQNLLINKRGELKLADFGLARAFGIP 153 (284)
T ss_pred CCc-cHHHHHHhcCCC--CCcCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCC
Confidence 985 899988765432 358999999999999999999998 89999999999999999999999999998754322
Q ss_pred CcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHH--
Q 006522 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAF-- 584 (642)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~-- 584 (642)
.. ......++..|++||++.....++.++|||||||++|||+||+.||.+..... ......+...
T Consensus 154 ~~------------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~-~~~~~~~~~~~~ 220 (284)
T cd07836 154 VN------------TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNED-QLLKIFRIMGTP 220 (284)
T ss_pred cc------------ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHHHhCCC
Confidence 10 01123457789999986554567899999999999999999999997543221 1111111100
Q ss_pred --------hccC----CCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 585 --------RERR----PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 585 --------~~~~----~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
.... ..+...+... ... .......+.+++.+|++.||.+||++.|+++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 221 TESTWPGISQLPEYKPTFPRYPPQDL-QQL-FPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred ChhhHHHHhcCchhcccccCCChHHH-HHH-hhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0000 0000000000 000 0011245678999999999999999999875
No 302
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=1.3e-34 Score=298.91 Aligned_cols=261 Identities=22% Similarity=0.270 Sum_probs=187.0
Q ss_pred CCceeEEEEecCCCCCCCCeEEEEEEecCC-CccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEeeccCCcH
Q 006522 354 KNGIMYKVVVGRGSGMGAPTVVAVRRLTEG-DATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL 432 (642)
Q Consensus 354 ~~g~vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL 432 (642)
++|.||.+.....+ +.||||++... ......+.+.+|++++++++||||+++++++...+..+++|||+++|+|
T Consensus 12 ~~~~v~~~~~~~~~-----~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l 86 (314)
T cd08216 12 DLMIVHLAKHKPTN-----TLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSC 86 (314)
T ss_pred CCceEEEEEecCCC-----CEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCH
Confidence 34445555544433 89999998764 2334457899999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCCCccccc
Q 006522 433 YAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKN 512 (642)
Q Consensus 433 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 512 (642)
.+++...... .+++.....++.|+++||+|||+ .+|+||||||+||+++.++.+|++|||.+............
T Consensus 87 ~~~l~~~~~~---~~~~~~~~~~~~~l~~~L~~LH~---~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~ 160 (314)
T cd08216 87 EDLLKTHFPE---GLPELAIAFILKDVLNALDYIHS---KGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRV 160 (314)
T ss_pred HHHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCcceEEEecCCceEEecCccceeeccccccccc
Confidence 9999865332 38899999999999999999999 89999999999999999999999999988765432211100
Q ss_pred ceeeecCCCcccccCCCcccCccccccC-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHhccCC--
Q 006522 513 ETIVTSGTGSRISAISNVYLAPEARIYG-SKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP-- 589 (642)
Q Consensus 513 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~~~~~-- 589 (642)
.. .......++..|+|||++... ..++.++|||||||++|||++|+.||...... .............
T Consensus 161 ~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~----~~~~~~~~~~~~~~~ 231 (314)
T cd08216 161 VH-----DFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPAT----QMLLEKVRGTVPCLL 231 (314)
T ss_pred cc-----cccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHhccCcccc
Confidence 00 011134567789999985442 35789999999999999999999999753221 1111111100000
Q ss_pred -----------Ccc----ccChhh---hhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 590 -----------LSE----VIDPAL---VKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 590 -----------~~~----~~d~~l---~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
... ..++.. ...........++.+++.+||+.||++|||+.|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 294 (314)
T cd08216 232 DKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLN 294 (314)
T ss_pred ccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhc
Confidence 000 000000 000011122346778999999999999999999986
No 303
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=1.2e-34 Score=292.15 Aligned_cols=252 Identities=24% Similarity=0.345 Sum_probs=192.8
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC---------ccccHHHHHHHHHHHhc-ccCCCeeeEEEEEEe
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD---------ATWRFKDFESEVEAIAR-VQHPNIVRLKAFYYA 416 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~---------~~~~~~~~~~E~~~l~~-l~H~nIv~l~~~~~~ 416 (642)
...||+|+||.||++....+.+ +.+|+|.+.... ......++.+|+.++.+ ++||||+++++++..
T Consensus 5 ~~~ig~G~~~~v~~~~~~~~~~----~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 5 LEHLGSGAFGCVYKVRKKNNGQ----NLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred hhhhcCCCCceEEEEEEcCCCC----ceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 4579999999999999877211 789999876421 12233567889998875 799999999999999
Q ss_pred CCceEEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEec
Q 006522 417 NDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISG 496 (642)
Q Consensus 417 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~D 496 (642)
.+..++||||+++++|.+++...... ...+++..++.++.|++.||.|||+. .+++|+||||+||++++++.+||+|
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~--~~i~H~dl~~~nil~~~~~~~~l~d 157 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEK-KQRFTEERIWNIFVQMVLALRYLHKE--KRIVHRDLTPNNIMLGEDDKVTITD 157 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHhccC--CceeecCCCHHHEEECCCCcEEEec
Confidence 99999999999999999988542211 13489999999999999999999952 5799999999999999999999999
Q ss_pred ccccccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccH
Q 006522 497 FGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGL 576 (642)
Q Consensus 497 fGla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l 576 (642)
||++....... ......|+..|+|||... +..++.++||||||+++|||++|+.||.... .
T Consensus 158 fg~~~~~~~~~-------------~~~~~~~~~~~~~Pe~~~-~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~-----~ 218 (269)
T cd08528 158 FGLAKQKQPES-------------KLTSVVGTILYSCPEIVK-NEPYGEKADVWAFGCILYQMCTLQPPFYSTN-----M 218 (269)
T ss_pred ccceeeccccc-------------ccccccCcccCcChhhhc-CCCCchHHHHHHHHHHHHHHHhCCCcccccC-----H
Confidence 99987654321 011345677899999855 4678999999999999999999999986421 1
Q ss_pred HHHHHHHHhccC-CCcc-ccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHH
Q 006522 577 ESLVRKAFRERR-PLSE-VIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 637 (642)
Q Consensus 577 ~~~~~~~~~~~~-~~~~-~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~ 637 (642)
............ +... ..+ ..+.+++.+||+.||++||++.|+.++++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~-------------~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 219 LSLATKIVEAVYEPLPEGMYS-------------EDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred HHHHHHHhhccCCcCCcccCC-------------HHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 222222222111 1111 111 23556888999999999999999999886
No 304
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=1.7e-34 Score=290.06 Aligned_cols=252 Identities=22% Similarity=0.330 Sum_probs=193.9
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCcc-ccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEe
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT-WRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
...||+|+||.||++....++ +.|++|.++..... ...+.+.+|++++++++|+||+++++++...+..++|+|
T Consensus 5 ~~~lg~G~~~~v~~~~~~~~~-----~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (264)
T cd06626 5 GNKIGGGTFGKVYTAVNLDTG-----ELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFME 79 (264)
T ss_pred eeEeecCCCcEEEEEEECCCC-----cEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEe
Confidence 367999999999999987654 78999998765332 345789999999999999999999999999999999999
Q ss_pred eccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCC
Q 006522 426 FIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPG 505 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 505 (642)
|+++++|.+++.... .+++..+..++.|+++||+|||+ .+++|+||||+||++++++.+||+|||++.....
T Consensus 80 ~~~~~~L~~~~~~~~-----~~~~~~~~~i~~~i~~~l~~lh~---~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~ 151 (264)
T cd06626 80 YCSGGTLEELLEHGR-----ILDEHVIRVYTLQLLEGLAYLHS---HGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKN 151 (264)
T ss_pred cCCCCcHHHHHhhcC-----CCChHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEcccccccccCC
Confidence 999999999997643 37889999999999999999999 8999999999999999999999999999887644
Q ss_pred CCcccccceeeecCCCcccccCCCcccCccccccCC--CCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHH
Q 006522 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGS--KFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKA 583 (642)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~ 583 (642)
...... .......++..|+|||++.... .++.++||||||+++||+++|+.||...... .......
T Consensus 152 ~~~~~~--------~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~----~~~~~~~ 219 (264)
T cd06626 152 NTTTMG--------EEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNE----FQIMFHV 219 (264)
T ss_pred CCCccc--------ccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcch----HHHHHHH
Confidence 321110 0011245677899999855422 2789999999999999999999999643221 1111111
Q ss_pred Hhc-cCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 584 FRE-RRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 584 ~~~-~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
... ...++... .....+.+++.+||+.+|++||++.|++.
T Consensus 220 ~~~~~~~~~~~~-----------~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 220 GAGHKPPIPDSL-----------QLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred hcCCCCCCCccc-----------ccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 111 11111111 00123456888999999999999999874
No 305
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=5.8e-35 Score=299.21 Aligned_cols=260 Identities=18% Similarity=0.254 Sum_probs=193.3
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCcc----ccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT----WRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLL 422 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 422 (642)
...||+|++|.||+|.....+ +.|+||.+...... .....+..|++++++++|+||+++++++...+..++
T Consensus 5 ~~~lg~g~~~~vy~~~~~~~~-----~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l 79 (298)
T cd07841 5 GKKLGEGTYAVVYKARDKETG-----RIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINL 79 (298)
T ss_pred eeeeeeccccEEEEEEECCCC-----cEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEE
Confidence 457999999999999987654 79999999765322 123567789999999999999999999999999999
Q ss_pred EEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEeccccccc
Q 006522 423 ISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRL 502 (642)
Q Consensus 423 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 502 (642)
||||+ +|+|.+++.... ..+++..+..++.||++||+|||+ .+++||||||+||+++.++.+||+|||+++.
T Consensus 80 v~e~~-~~~L~~~i~~~~----~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dl~p~nill~~~~~~~l~dfg~~~~ 151 (298)
T cd07841 80 VFEFM-ETDLEKVIKDKS----IVLTPADIKSYMLMTLRGLEYLHS---NWILHRDLKPNNLLIASDGVLKLADFGLARS 151 (298)
T ss_pred EEccc-CCCHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCChhhEEEcCCCCEEEccceeeee
Confidence 99999 899999997643 248999999999999999999999 8999999999999999999999999999986
Q ss_pred CCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHH
Q 006522 503 LPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRK 582 (642)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~ 582 (642)
....... .....++..|+|||.+.....++.++|||||||++|||++|..||..... ...+......
T Consensus 152 ~~~~~~~------------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~-~~~~~~~~~~ 218 (298)
T cd07841 152 FGSPNRK------------MTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSD-IDQLGKIFEA 218 (298)
T ss_pred ccCCCcc------------ccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCcc-HHHHHHHHHH
Confidence 5432110 01223566799999865545678999999999999999999877764322 1111111111
Q ss_pred HHhccC--------CCcccc------ChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 006522 583 AFRERR--------PLSEVI------DPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSES 635 (642)
Q Consensus 583 ~~~~~~--------~~~~~~------d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~ 635 (642)
..... ...... ...... ........+.+++.+||+.||++|||+.|+++.
T Consensus 219 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 219 -LGTPTEENWPGVTSLPDYVEFKPFPPTPLKQ--IFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred -cCCCchhhhhhcccccccccccccCCcchhh--hcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 00000 000000 000000 001123467789999999999999999999863
No 306
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=1.1e-34 Score=296.67 Aligned_cols=264 Identities=16% Similarity=0.187 Sum_probs=191.0
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCc-cccHHHHHHHHHHHhcc-cCCCeeeEEEEEEeCCc-----
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA-TWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDE----- 419 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~----- 419 (642)
.+.||+|+||.||++....++ +.||+|.+..... ....+.+.+|+.+++++ +||||+++++++...+.
T Consensus 6 ~~~lg~g~~g~vy~~~~~~~~-----~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 6 LEKIGEGTYGKVYKARDKNTG-----KLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred eeEecccCCeEEEEEEECCCC-----cEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 467999999999999987665 7999998865422 22236788999999999 56999999999987665
Q ss_pred eEEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCC-CCCeEEeccc
Q 006522 420 KLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDD-ELHPCISGFG 498 (642)
Q Consensus 420 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~-~~~~kl~DfG 498 (642)
.|+||||+++ +|.+++..........+++..+..++.||+.||+|||+ .+|+||||||+||+++. ++.+||+|||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~---~~i~H~dl~~~nil~~~~~~~~kl~dfg 156 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHK---HGVMHRDLKPQNLLVDKQKGLLKIADLG 156 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChHHEEEecCCCeEEEeecc
Confidence 8999999985 89998876443222358999999999999999999999 89999999999999998 8999999999
Q ss_pred ccccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHH
Q 006522 499 LNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLES 578 (642)
Q Consensus 499 la~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~ 578 (642)
+++....... ......+++.|+|||++.....++.++|||||||++|||+||..||.+.... ..+..
T Consensus 157 ~~~~~~~~~~------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~-~~~~~ 223 (295)
T cd07837 157 LGRAFSIPVK------------SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSEL-QQLLH 223 (295)
T ss_pred cceecCCCcc------------ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHH-HHHHH
Confidence 9875432210 0112245677999998655456799999999999999999999999753221 11111
Q ss_pred HHHHHHhccC-CCccc------------cChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 579 LVRKAFRERR-PLSEV------------IDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 579 ~~~~~~~~~~-~~~~~------------~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
.......... ..... ....+... ......++.+++.+||+.||++||++.|++.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 224 IFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRA--VPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred HHHHhCCCChhhCcchhhccchhhcCcccchhHHHh--ccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 1110000000 00000 00000000 0012245678999999999999999999874
No 307
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=9.5e-35 Score=296.89 Aligned_cols=262 Identities=18% Similarity=0.249 Sum_probs=191.7
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCcc-ccHHHHHHHHHHHhcccCCCeeeEEEEEEeC--CceEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT-WRFKDFESEVEAIARVQHPNIVRLKAFYYAN--DEKLLI 423 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~lv 423 (642)
...||+|+||.||+|.....+ +.+++|.++..... .....+.+|+.++++++||||+++++++... +..++|
T Consensus 10 ~~~lg~g~~~~v~~~~~~~~~-----~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 10 LNRIEEGTYGVVYRARDKKTG-----EIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhcCCCCeEEEEEEECCCC-----cEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 467999999999999987654 78999999754322 2225678899999999999999999999887 789999
Q ss_pred EeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccC
Q 006522 424 SDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLL 503 (642)
Q Consensus 424 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 503 (642)
|||+++ +|.+++..... .+++..+..++.||+.||+|||+ .+++||||||+||+++.++.+||+|||+++..
T Consensus 85 ~e~~~~-~L~~~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH~---~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~ 156 (293)
T cd07843 85 MEYVEH-DLKSLMETMKQ----PFLQSEVKCLMLQLLSGVAHLHD---NWILHRDLKTSNLLLNNRGILKICDFGLAREY 156 (293)
T ss_pred ehhcCc-CHHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCHHHEEECCCCcEEEeecCceeec
Confidence 999974 99999876442 48999999999999999999999 89999999999999999999999999998865
Q ss_pred CCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHH
Q 006522 504 PGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKA 583 (642)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~ 583 (642)
..... ......++..|+|||.+.....++.++||||+||++|||++|+.||...... ..+.......
T Consensus 157 ~~~~~------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~-~~~~~~~~~~ 223 (293)
T cd07843 157 GSPLK------------PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEI-DQLNKIFKLL 223 (293)
T ss_pred cCCcc------------ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHh
Confidence 43210 0112345678999998655445789999999999999999999999753221 1111111000
Q ss_pred H----------hcc-----CCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 584 F----------RER-----RPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 584 ~----------~~~-----~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
. ... ..........+............+.+++..||+.+|++|||+.|+++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 224 GTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred CCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 0 000 00000000011000000001234667999999999999999999975
No 308
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=1.3e-34 Score=294.27 Aligned_cols=261 Identities=18% Similarity=0.251 Sum_probs=191.9
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCcc-ccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEe
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT-WRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
...||+|++|.||++....++ +.|++|++...... ...+.+.+|++++++++||||+++++++...+..++|||
T Consensus 4 ~~~l~~g~~~~vy~~~~~~~~-----~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e 78 (283)
T cd07835 4 VEKIGEGTYGVVYKARDKLTG-----EIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFE 78 (283)
T ss_pred heEecCCCCeEEEEEEEcCCC-----CEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEe
Confidence 357899999999999987654 78999998754322 223678899999999999999999999999999999999
Q ss_pred eccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCC
Q 006522 426 FIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPG 505 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 505 (642)
|++ ++|.+++..... ..+++..+..++.|+++||+|||+ .+++||||+|+||+++.++.++|+|||+++....
T Consensus 79 ~~~-~~l~~~~~~~~~---~~~~~~~~~~~~~~i~~~L~~lH~---~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~ 151 (283)
T cd07835 79 FLD-LDLKKYMDSSPL---TGLDPPLIKSYLYQLLQGIAYCHS---HRVLHRDLKPQNLLIDREGALKLADFGLARAFGV 151 (283)
T ss_pred ccC-cCHHHHHhhCCC---CCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCHHHEEEcCCCcEEEeecccccccCC
Confidence 995 699999876542 248999999999999999999999 8999999999999999999999999999875432
Q ss_pred CCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHh
Q 006522 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR 585 (642)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~ 585 (642)
.... .....++..|+|||++.....++.++|||||||++|||+||+.||...... ..+....+....
T Consensus 152 ~~~~------------~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-~~~~~~~~~~~~ 218 (283)
T cd07835 152 PVRT------------YTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEI-DQLFRIFRTLGT 218 (283)
T ss_pred Cccc------------cCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCC
Confidence 2100 012245677999998655455789999999999999999999999753221 111111111000
Q ss_pred ccC--------------CCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 586 ERR--------------PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 586 ~~~--------------~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
... .......+..... .......+.+++.+||+.||++||+++|+++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 219 PDEDVWPGVTSLPDYKPTFPKWARQDLSKV--VPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred CChHHhhhhhhchhhhhhcccccccchhhh--cCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 000 0000000000000 0001135678999999999999999999875
No 309
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.4e-35 Score=300.07 Aligned_cols=249 Identities=17% Similarity=0.240 Sum_probs=189.9
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCC-CccccHHHHHHHHHHHhcc-cCCCeeeEEEEEEeCCceEEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG-DATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLIS 424 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~ 424 (642)
-..||+||.+.||++...+. ..+|+|++... .+.....-|..|+..|.+| .|.+||++++|-..++..||||
T Consensus 366 lk~iG~GGSSkV~kV~~s~~------~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvm 439 (677)
T KOG0596|consen 366 LKQIGSGGSSKVFKVLNSDK------QIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVM 439 (677)
T ss_pred HHhhcCCCcceeeeeecCCC------cchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEe
Confidence 46799999999999987766 67888877543 3334457799999999999 6999999999999999999999
Q ss_pred eeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCC
Q 006522 425 DFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLP 504 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 504 (642)
||-+. ||..+|+++... ...| .+..+..|++.|+.++|. .+|||.||||.|+|+-. |.+||+|||+|..+.
T Consensus 440 E~Gd~-DL~kiL~k~~~~---~~~~-~lk~ywkqML~aV~~IH~---~gIVHSDLKPANFLlVk-G~LKLIDFGIA~aI~ 510 (677)
T KOG0596|consen 440 ECGDI-DLNKILKKKKSI---DPDW-FLKFYWKQMLLAVKTIHQ---HGIVHSDLKPANFLLVK-GRLKLIDFGIANAIQ 510 (677)
T ss_pred ecccc-cHHHHHHhccCC---CchH-HHHHHHHHHHHHHHHHHH---hceeecCCCcccEEEEe-eeEEeeeechhcccC
Confidence 98755 999999887653 2445 677899999999999999 89999999999999974 689999999999876
Q ss_pred CCCcccccceeeecCCCcccccCCCcccCccccccC----------CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcc
Q 006522 505 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYG----------SKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGK 574 (642)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~ 574 (642)
.+.. ..-...-+||+.||+||.+... -+++.++||||+|||||+|+.|+.||..
T Consensus 511 ~DTT----------sI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~------ 574 (677)
T KOG0596|consen 511 PDTT----------SIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQ------ 574 (677)
T ss_pred cccc----------ceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHH------
Confidence 6531 1122245899999999975431 1367899999999999999999999963
Q ss_pred cHHHHHHHHHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 575 GLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 575 ~l~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
+...+.+. ..+.||...-+......-.+++++|..||..||++||+..|+++
T Consensus 575 -~~n~~aKl-------~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 575 -IINQIAKL-------HAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred -HHHHHHHH-------HhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhc
Confidence 11111111 11222211001111111233788999999999999999999885
No 310
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=2.1e-35 Score=307.74 Aligned_cols=263 Identities=17% Similarity=0.251 Sum_probs=190.9
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCC-----ceE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYAND-----EKL 421 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~-----~~~ 421 (642)
...||+|+||.||+|.....+ +.||+|.+..........++.+|+.++++++||||+++++++.... ..+
T Consensus 10 ~~~lg~G~~g~vy~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 84 (336)
T cd07849 10 LSYIGEGAYGMVCSATHKPTG-----VKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVY 84 (336)
T ss_pred EEEEEecCCeEEEEEEEcCCC-----CeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEE
Confidence 468999999999999987654 7899999875433333467889999999999999999999876543 579
Q ss_pred EEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccc
Q 006522 422 LISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNR 501 (642)
Q Consensus 422 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 501 (642)
+|+||+++ +|.+++... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++
T Consensus 85 lv~e~~~~-~l~~~~~~~------~l~~~~~~~i~~ql~~aL~~LH~---~~ivH~dlkp~Nill~~~~~~kl~dfg~~~ 154 (336)
T cd07849 85 IVQELMET-DLYKLIKTQ------HLSNDHIQYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTNCDLKICDFGLAR 154 (336)
T ss_pred EEehhccc-CHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEECCCCCEEECccccee
Confidence 99999975 888887643 38999999999999999999999 899999999999999999999999999987
Q ss_pred cCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHH
Q 006522 502 LLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVR 581 (642)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~ 581 (642)
......... .......||..|+|||.+.....++.++||||+||++|||+||+.||.+... ......+.
T Consensus 155 ~~~~~~~~~---------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~--~~~~~~~~ 223 (336)
T cd07849 155 IADPEHDHT---------GFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDY--LHQLNLIL 223 (336)
T ss_pred ecccccccc---------CCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHH
Confidence 654321100 0111346788899999855545689999999999999999999999965321 11111111
Q ss_pred HHHhccCC--CccccChhhhhc---------hh----HHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 006522 582 KAFRERRP--LSEVIDPALVKE---------IH----AKRQVLATFHIALNCTELDPEFRPRMRTVSES 635 (642)
Q Consensus 582 ~~~~~~~~--~~~~~d~~l~~~---------~~----~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~ 635 (642)
.......+ .....+...... .. ......++.+++.+||+.||++|||+.|+++.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 224 GVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred HHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 11110000 000000000000 00 00112456789999999999999999999864
No 311
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=1.7e-34 Score=298.29 Aligned_cols=260 Identities=21% Similarity=0.260 Sum_probs=196.0
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCcc--ccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT--WRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 424 (642)
...||+|++|.||++.....+ +.+|+|.+...... ...+.+.+|++++++++||||+++++++......++||
T Consensus 6 ~~~ig~g~~g~vy~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 6 IKLLGKGDVGRVFLVRLKGTG-----KLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred eeeecCCccEEEEEEEEcCCC-----cEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 457999999999999987754 89999999765322 23467899999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCC
Q 006522 425 DFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLP 504 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 504 (642)
||+++++|.+++..... ..+++..+..++.|+++||+|||+ .+++||||||+||+++.++.++|+|||++....
T Consensus 81 e~~~~~~L~~~~~~~~~---~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~ 154 (316)
T cd05574 81 DYCPGGELFRLLQRQPG---KCLSEEVARFYAAEVLLALEYLHL---LGIVYRDLKPENILLHESGHIMLSDFDLSKQSD 154 (316)
T ss_pred EecCCCCHHHHHHhCCC---CccCHHHHHHHHHHHHHHHHHHHH---CCeeccCCChHHeEEcCCCCEEEeecchhhccc
Confidence 99999999999875432 248999999999999999999999 899999999999999999999999999987654
Q ss_pred CCCcccccce-----------------eeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCC
Q 006522 505 GTSKVTKNET-----------------IVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDA 567 (642)
Q Consensus 505 ~~~~~~~~~~-----------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~ 567 (642)
.......... ............||..|+|||+.. +..++.++|||||||++|||++|+.||.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~~Di~slG~ll~~l~~g~~pf~ 233 (316)
T cd05574 155 VEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVIS-GDGHGSAVDWWTLGILLYEMLYGTTPFK 233 (316)
T ss_pred ccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHc-CCCCCchHHHHHHHHHHHHHhhCCCCCC
Confidence 3211100000 000011112346888999999854 4678999999999999999999999997
Q ss_pred CCCCCcccHHHHHHHHHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCC----HHHHHH
Q 006522 568 GPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPR----MRTVSE 634 (642)
Q Consensus 568 ~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs----~~ev~~ 634 (642)
..... ................. .....+.+++.+||+.||++||+ +.|++.
T Consensus 234 ~~~~~-----~~~~~~~~~~~~~~~~~-----------~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 234 GSNRD-----ETFSNILKKEVTFPGSP-----------PVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred CCchH-----HHHHHHhcCCccCCCcc-----------ccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence 54321 11222222221111110 01234567888999999999999 666554
No 312
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=1.6e-34 Score=290.99 Aligned_cols=235 Identities=19% Similarity=0.297 Sum_probs=181.9
Q ss_pred cCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcc-cCCCeeeEEEEEEeCCceEEEEeecc
Q 006522 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLISDFIR 428 (642)
Q Consensus 350 lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~e~~~ 428 (642)
+|+|+||.||++....++ ..+|+|.+....... .|+.....+ +||||+++++++...+..++||||++
T Consensus 24 lg~g~~g~v~~~~~~~~~-----~~~~~k~~~~~~~~~------~e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~ 92 (267)
T PHA03390 24 LIDGKFGKVSVLKHKPTQ-----KLFVQKIIKAKNFNA------IEPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMDYIK 92 (267)
T ss_pred ecCCCceEEEEEEEcCCC-----cEEEEEEEehhhcch------hhHHHHHHhhcCCCEEEEEEEEecCCeeEEEEEcCC
Confidence 699999999999987765 789999986532211 122222222 79999999999999999999999999
Q ss_pred CCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCC-CeEEecccccccCCCCC
Q 006522 429 NGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDEL-HPCISGFGLNRLLPGTS 507 (642)
Q Consensus 429 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~-~~kl~DfGla~~~~~~~ 507 (642)
+|+|.+++.... .++|..+..++.|+++||.|||+ .+++||||||+||+++.++ .++|+|||+++......
T Consensus 93 ~~~L~~~l~~~~-----~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~ 164 (267)
T PHA03390 93 DGDLFDLLKKEG-----KLSEAEVKKIIRQLVEALNDLHK---HNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTPS 164 (267)
T ss_pred CCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEEeCCCCeEEEecCccceecCCCc
Confidence 999999997653 48999999999999999999999 8999999999999999988 99999999987543221
Q ss_pred cccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHhcc
Q 006522 508 KVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRER 587 (642)
Q Consensus 508 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~~~ 587 (642)
...++..|+|||++. +..++.++|||||||++|||+||+.||.....+......+.... ...
T Consensus 165 ----------------~~~~~~~y~aPE~~~-~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~ 226 (267)
T PHA03390 165 ----------------CYDGTLDYFSPEKIK-GHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ-QKK 226 (267)
T ss_pred ----------------cCCCCCcccChhhhc-CCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh-ccc
Confidence 234677899999854 46789999999999999999999999985443332333333322 222
Q ss_pred CCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCC-HHHHHH
Q 006522 588 RPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPR-MRTVSE 634 (642)
Q Consensus 588 ~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs-~~ev~~ 634 (642)
.+....+++ .+.+++.+||+.+|.+||+ ++|+++
T Consensus 227 ~~~~~~~~~-------------~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 227 LPFIKNVSK-------------NANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred CCcccccCH-------------HHHHHHHHHhccChhhCCchHHHHhc
Confidence 222222333 3455777899999999996 688874
No 313
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=1.6e-34 Score=294.04 Aligned_cols=261 Identities=19% Similarity=0.276 Sum_probs=194.6
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC-ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeC--CceEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN--DEKLLI 423 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~lv 423 (642)
...||+|++|.||+|.....+ +.+|+|++.... .....+.+.+|++++++++|||++++++++... +..++|
T Consensus 4 ~~~l~~g~~~~vy~~~~~~~~-----~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 78 (287)
T cd07840 4 IAQIGEGTYGQVYKARNKKTG-----ELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMV 78 (287)
T ss_pred eEEeccCCCeEEEEEEECCCC-----eEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEE
Confidence 357899999999999988754 899999998753 223336788999999999999999999999988 789999
Q ss_pred EeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccC
Q 006522 424 SDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLL 503 (642)
Q Consensus 424 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 503 (642)
|||+++ +|.+++.... ..+++..+..++.||+.||+|||+ .+++|+||||+||++++++.+||+|||++...
T Consensus 79 ~e~~~~-~l~~~~~~~~----~~~~~~~~~~i~~~i~~al~~LH~---~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~ 150 (287)
T cd07840 79 FEYMDH-DLTGLLDSPE----VKFTESQIKCYMKQLLEGLQYLHS---NGILHRDIKGSNILINNDGVLKLADFGLARPY 150 (287)
T ss_pred eccccc-cHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCcHHHeEEcCCCCEEEccccceeec
Confidence 999975 9999887543 248999999999999999999999 89999999999999999999999999998766
Q ss_pred CCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHH
Q 006522 504 PGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKA 583 (642)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~ 583 (642)
..... .......++..|+|||.+.....++.++||||||+++|||+||+.||..... ...+.. +...
T Consensus 151 ~~~~~-----------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~-~~~~~~-~~~~ 217 (287)
T cd07840 151 TKRNS-----------ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTE-LEQLEK-IFEL 217 (287)
T ss_pred cCCCc-----------ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCCh-HHHHHH-HHHH
Confidence 43321 0011234567799999765545678999999999999999999999975332 111111 1111
Q ss_pred HhccC----C-C-----------ccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 584 FRERR----P-L-----------SEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 584 ~~~~~----~-~-----------~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
..... + . .......+... ........+.+++.+||+.+|++||++.++++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 218 CGSPTDENWPGVSKLPWFENLKPKKPYKRRLREF-FKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred hCCCchhhccccccchhhhhccccccchhHHHHH-hcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 10000 0 0 00000111000 00011356789999999999999999999875
No 314
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=1.5e-34 Score=294.17 Aligned_cols=245 Identities=20% Similarity=0.275 Sum_probs=192.2
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
...||+|++|.||++.....+ +.+++|++..... ...+.+.+|+.++++++||||+++++++...+..++|+||
T Consensus 24 ~~~lg~g~~g~v~~~~~~~~~-----~~~~iK~~~~~~~-~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~ 97 (285)
T cd06648 24 FVKIGEGSTGIVCIATDKSTG-----RQVAVKKMDLRKQ-QRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEF 97 (285)
T ss_pred ceEeccCCCeEEEEEEECCCC-----CEEEEEEEeccch-hHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEec
Confidence 468999999999999976654 7899998865332 2236788999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCC
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 506 (642)
+++++|.+++... .+++..+..++.|++.||+|||+ .+++||||||+||+++.++.++++|||.+......
T Consensus 98 ~~~~~L~~~~~~~------~~~~~~~~~~~~ql~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~ 168 (285)
T cd06648 98 LEGGALTDIVTHT------RMNEEQIATVCLAVLKALSFLHA---QGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKE 168 (285)
T ss_pred cCCCCHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCChhhEEEcCCCcEEEcccccchhhccC
Confidence 9999999998762 38899999999999999999999 89999999999999999999999999987654322
Q ss_pred CcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHhc
Q 006522 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE 586 (642)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~~ 586 (642)
.. ......|+..|+|||... +..++.++|||||||++|||++|+.||.... .....+.....
T Consensus 169 ~~------------~~~~~~~~~~y~aPE~~~-~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~-----~~~~~~~~~~~ 230 (285)
T cd06648 169 VP------------RRKSLVGTPYWMAPEVIS-RLPYGTEVDIWSLGIMVIEMVDGEPPYFNEP-----PLQAMKRIRDN 230 (285)
T ss_pred Cc------------ccccccCCccccCHHHhc-CCCCCCcccHHHHHHHHHHHHhCCCCCcCCC-----HHHHHHHHHhc
Confidence 10 011235778899999854 3678999999999999999999999986422 12222222222
Q ss_pred cCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 587 RRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 587 ~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
..+... .+. .....+.+++.+||+.+|++||++.|+++
T Consensus 231 ~~~~~~--~~~--------~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 231 LPPKLK--NLH--------KVSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred CCCCCc--ccc--------cCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 111100 000 01124667899999999999999999985
No 315
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=2.6e-34 Score=298.48 Aligned_cols=265 Identities=25% Similarity=0.285 Sum_probs=190.3
Q ss_pred ccCcc--CCceeEEEEecCCCCCCCCeEEEEEEecCCC-ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEe
Q 006522 349 VVGKS--KNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 349 ~lg~g--~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
.||+| +||+||++.....+ +.||+|.+.... .....+.+.+|+.+++.++||||++++++|...+..++|+|
T Consensus 5 ~ig~g~~~~~~v~~a~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e 79 (328)
T cd08226 5 EIGRGFCNLTSVYLARHTPTG-----TLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISP 79 (328)
T ss_pred HhCCcccCceeEEEEEEcCCC-----cEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEe
Confidence 45555 89999999987654 899999987543 22334778999999999999999999999999999999999
Q ss_pred eccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCC
Q 006522 426 FIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPG 505 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 505 (642)
|+.+|+|.+++...... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+|++||+.+.....
T Consensus 80 ~~~~~~l~~~l~~~~~~---~~~~~~~~~~~~qi~~aL~~lH~---~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~ 153 (328)
T cd08226 80 FMAYGSANSLLKTYFPE---GMSEALIGNILFGALRGLNYLHQ---NGYIHRNIKASHILISGDGLVSLSGLSHLYSLVR 153 (328)
T ss_pred cccCCCHHHHHHhhccc---CCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEeCCCcEEEechHHHhhhhc
Confidence 99999999999865432 48899999999999999999998 8999999999999999999999999986543322
Q ss_pred CCcccccceeeecCCCcccccCCCcccCccccccC-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHH
Q 006522 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYG-SKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAF 584 (642)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~ 584 (642)
...... . .........++..|+|||++..+ ..++.++|||||||++|||++|+.||....... .......
T Consensus 154 ~~~~~~--~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~----~~~~~~~ 224 (328)
T cd08226 154 NGQKAK--V---VYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQ----MLLQKLK 224 (328)
T ss_pred cCcccc--c---cccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHH----HHHHHhc
Confidence 110000 0 00000112345669999986543 347899999999999999999999997532211 1111110
Q ss_pred hccC-CCc---------------------------------cccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHH
Q 006522 585 RERR-PLS---------------------------------EVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMR 630 (642)
Q Consensus 585 ~~~~-~~~---------------------------------~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ 630 (642)
.... +.. ...+..+.. .........+.+++.+||+.||++|||+.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~dP~~Rpta~ 303 (328)
T cd08226 225 GPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRT-PSSKTFSPAFQNLVELCLQQDPEKRPSAS 303 (328)
T ss_pred CCCCCCccccccchhhhhhccchhhhhcccccchhccccccccccccccc-hhhhhhhHHHHHHHHHHccCCcccCCCHH
Confidence 0000 000 000000000 01122345678999999999999999999
Q ss_pred HHHH
Q 006522 631 TVSE 634 (642)
Q Consensus 631 ev~~ 634 (642)
|+++
T Consensus 304 e~l~ 307 (328)
T cd08226 304 SLLS 307 (328)
T ss_pred HHhh
Confidence 9974
No 316
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-36 Score=296.29 Aligned_cols=243 Identities=23% Similarity=0.251 Sum_probs=192.0
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC--ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 424 (642)
.++||+|+||.||-+....++ +.+|+|++.+.. ........+.|-.+|.+++.+.||.+-..|++.+..++|+
T Consensus 190 ~RvlGkGGFGEV~acqvraTG-----KMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVL 264 (591)
T KOG0986|consen 190 YRVLGKGGFGEVCACQVRATG-----KMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVL 264 (591)
T ss_pred eEEEecccccceeEEEEecch-----hhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEE
Confidence 478999999999999998876 788888876541 1112255788999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCC
Q 006522 425 DFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLP 504 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 504 (642)
..|.||||.-+|...+. +.+++...+.++.+|+.||++||. .+||.|||||+|||||++|+++|+|.|+|..+.
T Consensus 265 tlMNGGDLkfHiyn~g~---~gF~e~ra~FYAAEi~cGLehlH~---~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~ 338 (591)
T KOG0986|consen 265 TLMNGGDLKFHIYNHGN---PGFDEQRARFYAAEIICGLEHLHR---RRIVYRDLKPENILLDDHGHVRISDLGLAVEIP 338 (591)
T ss_pred EeecCCceeEEeeccCC---CCCchHHHHHHHHHHHhhHHHHHh---cceeeccCChhheeeccCCCeEeeccceEEecC
Confidence 99999999999887664 459999999999999999999999 899999999999999999999999999998876
Q ss_pred CCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHH-HHHHHH
Q 006522 505 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLE-SLVRKA 583 (642)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~-~~~~~~ 583 (642)
.... -+..+||.+|||||++.. ..|+...|.||+||++|||+.|+.||..... +.-. +.-+..
T Consensus 339 ~g~~-------------~~~rvGT~GYMAPEvl~n-e~Y~~s~Dwf~lGCllYemi~G~sPFr~~Ke--Kvk~eEvdrr~ 402 (591)
T KOG0986|consen 339 EGKP-------------IRGRVGTVGYMAPEVLQN-EVYDFSPDWFSLGCLLYEMIAGHSPFRQRKE--KVKREEVDRRT 402 (591)
T ss_pred CCCc-------------cccccCcccccCHHHHcC-CcccCCccHHHHHhHHHHHHcccCchhhhhh--hhhHHHHHHHH
Confidence 5421 124589999999999555 6699999999999999999999999964222 1111 122222
Q ss_pred HhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCH
Q 006522 584 FRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRM 629 (642)
Q Consensus 584 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~ 629 (642)
......+++-++++. -++....+..||++|.--
T Consensus 403 ~~~~~ey~~kFS~ea-------------kslc~~LL~Kdp~~RLGc 435 (591)
T KOG0986|consen 403 LEDPEEYSDKFSEEA-------------KSLCEGLLTKDPEKRLGC 435 (591)
T ss_pred hcchhhcccccCHHH-------------HHHHHHHHccCHHHhccC
Confidence 222222333344333 235555788999998643
No 317
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=4.6e-34 Score=295.14 Aligned_cols=245 Identities=22% Similarity=0.335 Sum_probs=190.3
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCc--cccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA--TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 424 (642)
.+.||+|+||.||+++...++ ..||+|.+..... ....+++.+|++++++++|||++++++++...+..++||
T Consensus 30 ~~~lg~G~~~~v~~~~~~~~~-----~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 104 (317)
T cd06635 30 LREIGHGSFGAVYFARDVRTN-----EVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVM 104 (317)
T ss_pred hheeccCCCeEEEEEEEcCCC-----cEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEE
Confidence 467999999999999987654 7899999875422 223367889999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCC
Q 006522 425 DFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLP 504 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 504 (642)
||++ |+|.+.+..... +++|.++..++.|++.||.|||+ .+|+||||||+||+++.++.+||+|||++....
T Consensus 105 e~~~-g~l~~~~~~~~~----~l~~~~~~~i~~~i~~~l~~lH~---~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~ 176 (317)
T cd06635 105 EYCL-GSASDLLEVHKK----PLQEVEIAAITHGALQGLAYLHS---HNMIHRDIKAGNILLTEPGQVKLADFGSASIAS 176 (317)
T ss_pred eCCC-CCHHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcccEEECCCCCEEEecCCCccccC
Confidence 9997 588888765432 48999999999999999999999 899999999999999999999999999886543
Q ss_pred CCCcccccceeeecCCCcccccCCCcccCccccc--cCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHH
Q 006522 505 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARI--YGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRK 582 (642)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~ 582 (642)
.. ....|+..|+|||++. ....++.++|||||||++|||++|+.||..... ......
T Consensus 177 ~~----------------~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~-----~~~~~~ 235 (317)
T cd06635 177 PA----------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-----MSALYH 235 (317)
T ss_pred Cc----------------ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccH-----HHHHHH
Confidence 21 1235677899999853 235688999999999999999999999865321 111122
Q ss_pred HHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHH
Q 006522 583 AFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESL 636 (642)
Q Consensus 583 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L 636 (642)
......+.. ... .....+.+++.+||+.+|++||++.|+++.+
T Consensus 236 ~~~~~~~~~--~~~---------~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~ 278 (317)
T cd06635 236 IAQNESPTL--QSN---------EWSDYFRNFVDSCLQKIPQDRPTSEELLKHM 278 (317)
T ss_pred HHhccCCCC--CCc---------cccHHHHHHHHHHccCCcccCcCHHHHHhCh
Confidence 222211100 000 0112355688899999999999999998754
No 318
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=1.3e-34 Score=294.06 Aligned_cols=247 Identities=19% Similarity=0.297 Sum_probs=188.7
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcc-cCCCeeeEEEEEEe------CCc
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYA------NDE 419 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~------~~~ 419 (642)
...+|+|+||.||+|.....+ +.+|+|.+..... ...++..|+.++.++ +||||+++++++.. .+.
T Consensus 21 ~~~lg~g~~~~v~~~~~~~~~-----~~~a~K~~~~~~~--~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~ 93 (282)
T cd06636 21 VEVVGNGTYGQVYKGRHVKTG-----QLAAIKVMDVTED--EEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQ 93 (282)
T ss_pred heeeccCCCeEEEEEEEcCCC-----cEEEEEEEecChH--HHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCE
Confidence 357999999999999987664 7899999865432 236788999999999 79999999999863 356
Q ss_pred eEEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccc
Q 006522 420 KLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGL 499 (642)
Q Consensus 420 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGl 499 (642)
.++||||+++|+|.+++..... ..+++..+..++.|++.||+|||+ .+|+||||||+||++++++.++|+|||+
T Consensus 94 ~~iv~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~~~qi~~al~~LH~---~~ivH~dl~~~nili~~~~~~~l~dfg~ 167 (282)
T cd06636 94 LWLVMEFCGAGSVTDLVKNTKG---NALKEDWIAYICREILRGLAHLHA---HKVIHRDIKGQNVLLTENAEVKLVDFGV 167 (282)
T ss_pred EEEEEEeCCCCcHHHHHHHccC---CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEeeCcc
Confidence 8999999999999999976443 248888999999999999999999 8999999999999999999999999999
Q ss_pred cccCCCCCcccccceeeecCCCcccccCCCcccCcccccc----CCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCccc
Q 006522 500 NRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIY----GSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKG 575 (642)
Q Consensus 500 a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~ 575 (642)
++....... ......|+..|+|||.+.. ...++.++|||||||++|||+||+.||.....
T Consensus 168 ~~~~~~~~~------------~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~---- 231 (282)
T cd06636 168 SAQLDRTVG------------RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHP---- 231 (282)
T ss_pred hhhhhcccc------------CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCH----
Confidence 875432110 0113457888999998542 24578899999999999999999999964321
Q ss_pred HHHHHHHHHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 576 LESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 576 l~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
...... ...... ... .+ ......+.+++.+||+.||.+||++.|+++
T Consensus 232 ~~~~~~-~~~~~~--~~~-~~--------~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 232 MRALFL-IPRNPP--PKL-KS--------KKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred Hhhhhh-HhhCCC--CCC-cc--------cccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 111111 111110 110 00 011234667899999999999999999874
No 319
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=2.5e-34 Score=288.80 Aligned_cols=251 Identities=19% Similarity=0.267 Sum_probs=192.9
Q ss_pred cccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC-ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeC--CceEEEE
Q 006522 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN--DEKLLIS 424 (642)
Q Consensus 348 ~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~lv~ 424 (642)
..+|+|+||.||++....++ ..+++|.+.... .....+++..|++++++++||||+++++++... ...+++|
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~-----~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 6 ETIGKGSFGTVRKVRRKSDG-----KILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred eeeccCCCeEEEEeeecCCC-----CEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 57899999999999987765 789999987542 223346788999999999999999999988653 4578999
Q ss_pred eeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC--CCCceecCCCCCCeeeCCCCCeEEeccccccc
Q 006522 425 DFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYS--PRKYVHGNIKSTKILLDDELHPCISGFGLNRL 502 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~--~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 502 (642)
||+++++|.+++...... ..++++..++.++.|++.||+|||..+ ..+++|+||||+||++++++.+||+|||+++.
T Consensus 81 e~~~~~~L~~~l~~~~~~-~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~ 159 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKE-RKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKI 159 (265)
T ss_pred hhccCCCHHHHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEeccccccc
Confidence 999999999999764221 235999999999999999999999321 27999999999999999999999999999887
Q ss_pred CCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHH
Q 006522 503 LPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRK 582 (642)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~ 582 (642)
....... .....++..|+|||.+.. ..++.++||||||+++|+|++|+.||.... .....+.
T Consensus 160 ~~~~~~~------------~~~~~~~~~~~~pE~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-----~~~~~~~ 221 (265)
T cd08217 160 LGHDSSF------------AKTYVGTPYYMSPEQLNH-MSYDEKSDIWSLGCLIYELCALSPPFTARN-----QLQLASK 221 (265)
T ss_pred ccCCccc------------ccccccCCCccChhhhcC-CCCCchhHHHHHHHHHHHHHHCCCcccCcC-----HHHHHHH
Confidence 6433110 112356788999998544 668899999999999999999999997532 1222222
Q ss_pred HHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 583 AFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 583 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
...... ..+.+. ....+.+++.+|++.+|++||++.||++
T Consensus 222 ~~~~~~---~~~~~~---------~~~~~~~l~~~~l~~~p~~Rp~~~~il~ 261 (265)
T cd08217 222 IKEGKF---RRIPYR---------YSSELNEVIKSMLNVDPDKRPSTEELLQ 261 (265)
T ss_pred HhcCCC---CCCccc---------cCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 221111 111111 1134567888999999999999999986
No 320
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=6.5e-35 Score=318.39 Aligned_cols=270 Identities=16% Similarity=0.200 Sum_probs=179.9
Q ss_pred ccccCccCCceeEEEEecCCCCCCC--------------CeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGA--------------PTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKA 412 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~--------------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~ 412 (642)
...||+|+||.||++......+... ...++.|.+.. .......+.+|+.+|++++|||||++++
T Consensus 153 i~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~--~~~~~~~~~~Ei~il~~l~HpnIv~l~~ 230 (501)
T PHA03210 153 IDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKA--GSRAAIQLENEILALGRLNHENILKIEE 230 (501)
T ss_pred EeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhc--chHHHHHHHHHHHHHHhCCCCCcCcEeE
Confidence 4689999999999987654321000 00111222221 1122367889999999999999999999
Q ss_pred EEEeCCceEEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCe
Q 006522 413 FYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHP 492 (642)
Q Consensus 413 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~ 492 (642)
++...+..|+|+|++. ++|.+++..................|+.||+.||+|||+ .+|+||||||+|||++.++.+
T Consensus 231 ~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~---~gIiHrDLKP~NILl~~~~~v 306 (501)
T PHA03210 231 ILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHD---KKLIHRDIKLENIFLNCDGKI 306 (501)
T ss_pred EEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCE
Confidence 9999999999999985 588888765432211223456677899999999999999 899999999999999999999
Q ss_pred EEecccccccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCC-
Q 006522 493 CISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEN- 571 (642)
Q Consensus 493 kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~- 571 (642)
||+|||+++.+...... ......||..|+|||++. +..++.++|||||||++|||++|..++.....
T Consensus 307 kL~DFGla~~~~~~~~~-----------~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~ 374 (501)
T PHA03210 307 VLGDFGTAMPFEKEREA-----------FDYGWVGTVATNSPEILA-GDGYCEITDIWSCGLILLDMLSHDFCPIGDGGG 374 (501)
T ss_pred EEEeCCCceecCccccc-----------ccccccCCcCCCCchhhc-CCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCC
Confidence 99999999876432110 111346889999999854 47789999999999999999998865432211
Q ss_pred C-cccHHHHHHHHHhccCCCccc-------cC--------hhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 572 D-GKGLESLVRKAFRERRPLSEV-------ID--------PALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 572 ~-~~~l~~~~~~~~~~~~~~~~~-------~d--------~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
. ...+...+.........+++. ++ ..+...+........+.+++.+|++.||++|||+.|+++
T Consensus 375 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~ 453 (501)
T PHA03210 375 KPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLA 453 (501)
T ss_pred CHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhh
Confidence 1 111111111110000000000 00 000000000001124566788999999999999999986
No 321
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=2.4e-34 Score=288.55 Aligned_cols=244 Identities=19% Similarity=0.243 Sum_probs=184.6
Q ss_pred ccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCc--cccHHHHHHHHHHH-hcccCCCeeeEEEEEEeCCceEEEEe
Q 006522 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA--TWRFKDFESEVEAI-ARVQHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 349 ~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l-~~l~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
.||+|++|.||+|.....+ +.||||.+..... ......+..|..++ ...+|+||+++++++...+..++|+|
T Consensus 3 ~l~~g~~~~v~~a~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e 77 (260)
T cd05611 3 PISKGAFGSVYLAKKRSTG-----DYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVME 77 (260)
T ss_pred cCCcCCCeeEEEEEecCCC-----CeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEe
Confidence 5899999999999987654 7899999875421 11223455565554 45589999999999999999999999
Q ss_pred eccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCC
Q 006522 426 FIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPG 505 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 505 (642)
|+++++|.+++.... ++++..+..++.|++.||.|||+ .+++||||+|+||++++++.+||+|||+++....
T Consensus 78 ~~~~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~aL~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 149 (260)
T cd05611 78 YLNGGDCASLIKTLG-----GLPEDWAKQYIAEVVLGVEDLHQ---RGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE 149 (260)
T ss_pred ccCCCCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCcEEEeecccceeccc
Confidence 999999999997543 48899999999999999999999 8999999999999999999999999999875432
Q ss_pred CCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHh
Q 006522 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR 585 (642)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~ 585 (642)
. ....++..|+|||.... ..++.++||||||+++|||+||..||..... .........
T Consensus 150 ~----------------~~~~~~~~y~~pe~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~ 207 (260)
T cd05611 150 N----------------KKFVGTPDYLAPETILG-VGDDKMSDWWSLGCVIFEFLFGYPPFHAETP-----DAVFDNILS 207 (260)
T ss_pred c----------------ccCCCCcCccChhhhcC-CCCcchhhhHHHHHHHHHHHHCCCCCCCCCH-----HHHHHHHHh
Confidence 1 12346677999998554 5589999999999999999999999964322 222222222
Q ss_pred ccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHH
Q 006522 586 ERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESL 636 (642)
Q Consensus 586 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L 636 (642)
..........+. ....+.+++.+||+.+|++||++.++.+.|
T Consensus 208 ~~~~~~~~~~~~---------~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l 249 (260)
T cd05611 208 RRINWPEEVKEF---------CSPEAVDLINRLLCMDPAKRLGANGYQEIK 249 (260)
T ss_pred cccCCCCccccc---------CCHHHHHHHHHHccCCHHHccCCCcHHHHH
Confidence 111111111110 112456788899999999999876555544
No 322
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1e-36 Score=334.88 Aligned_cols=251 Identities=24% Similarity=0.312 Sum_probs=199.3
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC-ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEe
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
+..||.|.||.||.+...+.+ ...|||-++-.+ .....+...+|..++..++|||+|+++|+-..++..++.||
T Consensus 1240 g~~Ig~G~fG~VYtavN~~tG-----ellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFME 1314 (1509)
T KOG4645|consen 1240 GNFIGGGTFGKVYTAVNLDTG-----ELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFME 1314 (1509)
T ss_pred ccccCCcceeeeEEeecCCcc-----chhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHH
Confidence 689999999999999988876 788888776542 23334677899999999999999999999999999999999
Q ss_pred eccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCC
Q 006522 426 FIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPG 505 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 505 (642)
||++|+|.+.+...+. .++.....+..|++.|++|||+ .+||||||||.||+||.+|.+|++|||.|..+..
T Consensus 1315 yC~~GsLa~ll~~gri-----~dE~vt~vyt~qll~gla~LH~---~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~ 1386 (1509)
T KOG4645|consen 1315 YCEGGSLASLLEHGRI-----EDEMVTRVYTKQLLEGLAYLHE---HGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKN 1386 (1509)
T ss_pred HhccCcHHHHHHhcch-----hhhhHHHHHHHHHHHHHHHHHh---cCceecCCCccceeeecCCcEEeecccceeEecC
Confidence 9999999999976543 5666777789999999999999 8999999999999999999999999999987765
Q ss_pred CCcccccceeeecCCCcccccCCCcccCccccccC--CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHH
Q 006522 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYG--SKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKA 583 (642)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~ 583 (642)
... +.+..-....||+.|||||++.+. ....-++||||+|||+.||+||+.||...+++ ..-..+..
T Consensus 1387 ~~~--------~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne---~aIMy~V~ 1455 (1509)
T KOG4645|consen 1387 NAQ--------TMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNE---WAIMYHVA 1455 (1509)
T ss_pred chh--------cCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccch---hHHHhHHh
Confidence 421 112223356899999999996542 34567899999999999999999999754442 22222333
Q ss_pred HhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 584 FRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 584 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
....+++++-++++-. +++-.|+..||++|.++.|+++
T Consensus 1456 ~gh~Pq~P~~ls~~g~-------------dFle~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1456 AGHKPQIPERLSSEGR-------------DFLEHCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred ccCCCCCchhhhHhHH-------------HHHHHHHhcCchhhhHHHHHHH
Confidence 3344455555554433 3666699999999999887765
No 323
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=1.4e-34 Score=293.91 Aligned_cols=259 Identities=20% Similarity=0.328 Sum_probs=193.5
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhccc-CCCeeeEEEEEEeCCceEEEEe
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ-HPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lv~e 425 (642)
.+.||+|++|.||+|.....+ +.|++|++.............+|+..+++++ ||||+++++++...+..++|||
T Consensus 4 ~~~ig~g~~g~v~~~~~~~~~-----~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 78 (283)
T cd07830 4 IKQLGDGTFGSVYLARNKETG-----ELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFE 78 (283)
T ss_pred heeeccCCceEEEEEEECCCC-----cEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEe
Confidence 457899999999999987654 7899999876533222244567999999998 9999999999999999999999
Q ss_pred eccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCC
Q 006522 426 FIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPG 505 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 505 (642)
|+ +|+|.+++..... ..++|..+..++.|++.||.|||+ .+++|+||||+||++++++.++|+|||+++....
T Consensus 79 ~~-~~~l~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~Lh~---~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~ 151 (283)
T cd07830 79 YM-EGNLYQLMKDRKG---KPFSESVIRSIIYQILQGLAHIHK---HGFFHRDLKPENLLVSGPEVVKIADFGLAREIRS 151 (283)
T ss_pred cC-CCCHHHHHHhccc---ccCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEEcCCCCEEEeecccceeccC
Confidence 99 8899999876542 248999999999999999999999 8999999999999999999999999999876543
Q ss_pred CCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHh
Q 006522 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR 585 (642)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~ 585 (642)
... .....++..|+|||++.....++.++||||||+++|||+||+.||....... .... ......
T Consensus 152 ~~~-------------~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~-~~~~-~~~~~~ 216 (283)
T cd07830 152 RPP-------------YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEID-QLYK-ICSVLG 216 (283)
T ss_pred CCC-------------cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHH-HHHH-HHHhcC
Confidence 211 1123467789999986555668999999999999999999999996542211 0100 000000
Q ss_pred c----------------cCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 586 E----------------RRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 586 ~----------------~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
. ...+.......+.... ......+.+++.+||+.+|++||+++|++.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 217 TPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLI--PNASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred CCChhhhhhHhhhhccccccccccccccHHHHc--ccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 0 0000000001010000 011245778999999999999999999875
No 324
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=2.4e-34 Score=293.47 Aligned_cols=244 Identities=20% Similarity=0.288 Sum_probs=189.4
Q ss_pred cccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEeec
Q 006522 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFI 427 (642)
Q Consensus 348 ~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~ 427 (642)
..||+|+||.||++.....+ ..||+|.+..... ...+.+.+|+.++++++|+||+++++++...+..++||||+
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~-----~~v~iK~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 99 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSG-----KLVAVKKMDLRKQ-QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 99 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCC-----eEEEEEEecccch-hHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecC
Confidence 57899999999999887654 8999998865332 23467899999999999999999999999999999999999
Q ss_pred cCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCCC
Q 006522 428 RNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTS 507 (642)
Q Consensus 428 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 507 (642)
++++|.+++... .+++.....++.|++.||+|||+ .+++||||||+||++++++.++|+|||++.......
T Consensus 100 ~~~~L~~~~~~~------~~~~~~~~~~~~ql~~~l~~lH~---~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~ 170 (292)
T cd06657 100 EGGALTDIVTHT------RMNEEQIAAVCLAVLKALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV 170 (292)
T ss_pred CCCcHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEcccccceeccccc
Confidence 999999987542 37899999999999999999999 899999999999999999999999999886543221
Q ss_pred cccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHhcc
Q 006522 508 KVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRER 587 (642)
Q Consensus 508 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~~~ 587 (642)
. ......|+..|+|||... +..++.++||||+||++|||++|+.||..... ......+.......
T Consensus 171 ~------------~~~~~~~~~~y~~pE~~~-~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~--~~~~~~~~~~~~~~ 235 (292)
T cd06657 171 P------------RRKSLVGTPYWMAPELIS-RLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP--LKAMKMIRDNLPPK 235 (292)
T ss_pred c------------cccccccCccccCHHHhc-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHhhCCcc
Confidence 0 011335778899999854 46788999999999999999999999864221 11111111111110
Q ss_pred CCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 588 RPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 588 ~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
......+++ .+.+++.+||+.+|.+||++.|+++
T Consensus 236 ~~~~~~~~~-------------~l~~li~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 236 LKNLHKVSP-------------SLKGFLDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred cCCcccCCH-------------HHHHHHHHHHhCCcccCcCHHHHhc
Confidence 000111122 2445788899999999999999886
No 325
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=1.2e-34 Score=295.96 Aligned_cols=246 Identities=19% Similarity=0.300 Sum_probs=191.0
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
...||+|+||.||++....++ +.|++|.+..... ...+.+.+|+.++++++||||+++++++...+..++|+||
T Consensus 24 ~~~lg~g~~g~v~~~~~~~~~-----~~v~iK~~~~~~~-~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~ 97 (293)
T cd06647 24 FEKIGQGASGTVYTAIDVATG-----QEVAIKQMNLQQQ-PKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEY 97 (293)
T ss_pred eeEecCCCCeEEEEEEEcCCC-----CEEEEEEeccccc-hHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEec
Confidence 467999999999999876554 7899999865322 2236789999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCC
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 506 (642)
+++|+|.+++... .+++..+..++.|++.||.|||+ .+++||||||+||+++.++.+||+|||++......
T Consensus 98 ~~~~~L~~~~~~~------~l~~~~~~~i~~~l~~al~~LH~---~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~ 168 (293)
T cd06647 98 LAGGSLTDVVTET------CMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 168 (293)
T ss_pred CCCCcHHHHHhhc------CCCHHHHHHHHHHHHHHHHHHHh---CCEeeccCCHHHEEEcCCCCEEEccCcceeccccc
Confidence 9999999999753 37889999999999999999999 89999999999999999999999999988755332
Q ss_pred CcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHhc
Q 006522 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE 586 (642)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~~ 586 (642)
.. ......|++.|+|||.+.. ..++.++|||||||++||+++|+.||....... .+......
T Consensus 169 ~~------------~~~~~~~~~~y~~PE~~~~-~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~-----~~~~~~~~ 230 (293)
T cd06647 169 QS------------KRSTMVGTPYWMAPEVVTR-KAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR-----ALYLIATN 230 (293)
T ss_pred cc------------ccccccCChhhcCchhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCChhh-----heeehhcC
Confidence 11 0112357788999998544 678899999999999999999999997533211 01111111
Q ss_pred cCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 006522 587 RRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSES 635 (642)
Q Consensus 587 ~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~ 635 (642)
..+ ....+. .....+.+++.+||+.+|++||++.+++..
T Consensus 231 ~~~--~~~~~~--------~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 231 GTP--ELQNPE--------KLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred CCC--CCCCcc--------ccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 111 000000 011234568889999999999999999853
No 326
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=2.1e-34 Score=294.23 Aligned_cols=260 Identities=16% Similarity=0.180 Sum_probs=179.2
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccH----------HHHHHHHHHHhcccCCCeeeEEEEEEe
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRF----------KDFESEVEAIARVQHPNIVRLKAFYYA 416 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~----------~~~~~E~~~l~~l~H~nIv~l~~~~~~ 416 (642)
.+.||+|+||.||+|....+... ...+++|........... .....+...+..++|+||+++++++..
T Consensus 17 ~~~LG~G~fG~Vy~~~~~~~~~~--~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~ 94 (294)
T PHA02882 17 DKLIGCGGFGCVYETQCASDHCI--NNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGCGSF 94 (294)
T ss_pred eeEEecCCCceEEEEEEcCCccc--ccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEeeeE
Confidence 46899999999999998665211 145666654322211100 112334455667799999999998766
Q ss_pred CC----ceEEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCe
Q 006522 417 ND----EKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHP 492 (642)
Q Consensus 417 ~~----~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~ 492 (642)
.. ..++++|++.. ++.+.+.... ..++..+..|+.|++.||+|||+ .+|+||||||+|||++.++.+
T Consensus 95 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~---~~iiHrDiKp~Nill~~~~~~ 165 (294)
T PHA02882 95 KRCRMYYRFILLEKLVE-NTKEIFKRIK-----CKNKKLIKNIMKDMLTTLEYIHE---HGISHGDIKPENIMVDGNNRG 165 (294)
T ss_pred ecCCceEEEEEEehhcc-CHHHHHHhhc-----cCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCcE
Confidence 54 34678887754 6766665432 25778889999999999999999 899999999999999999999
Q ss_pred EEecccccccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCC
Q 006522 493 CISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEND 572 (642)
Q Consensus 493 kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~ 572 (642)
+|+|||+++.+......... .........||+.|+|||+.. +..++.++|||||||++|||+||+.||......
T Consensus 166 ~l~DFGla~~~~~~~~~~~~-----~~~~~~~~~gt~~y~ape~~~-~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~ 239 (294)
T PHA02882 166 YIIDYGIASHFIIHGKHIEY-----SKEQKDLHRGTLYYAGLDAHN-GACVTRRGDLESLGYCMLKWAGIKLPWKGFGHN 239 (294)
T ss_pred EEEEcCCceeeccCCccccc-----ccccccccCCCccccCHHHhC-CCCCCcHHHHHHHHHHHHHHHhCCCCCCccccc
Confidence 99999999876432211100 001112346899999999854 477899999999999999999999999764332
Q ss_pred cccHH----HHHHHHHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHH
Q 006522 573 GKGLE----SLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 637 (642)
Q Consensus 573 ~~~l~----~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~ 637 (642)
..... .+..+........ . .....+.+++..|++.+|++||++.++.+.|+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~-~-------------~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~ 294 (294)
T PHA02882 240 GNLIHAAKCDFIKRLHEGKIKI-K-------------NANKFIYDFIECVTKLSYEEKPDYDALIKIFD 294 (294)
T ss_pred hHHHHHhHHHHHHHhhhhhhcc-C-------------CCCHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence 21111 1111111111000 0 01234667888899999999999999998763
No 327
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=3e-34 Score=289.97 Aligned_cols=250 Identities=22% Similarity=0.320 Sum_probs=191.0
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcc-cCCCeeeEEEEEEeCC------c
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYAND------E 419 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~------~ 419 (642)
...||+|++|.||+|.....+ +.+++|.+...... .++|.+|+.+++++ +|+||+++++++.... .
T Consensus 11 ~~~l~~g~~~~v~~~~~~~~~-----~~~~~k~~~~~~~~--~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~ 83 (275)
T cd06608 11 VEVIGEGTYGKVYKARHKKTG-----QLVAIKIMDIIEDE--EEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQ 83 (275)
T ss_pred eeeecCCCCeEEEEEEECCCC-----cEEEEEEEecCchh--HHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceE
Confidence 467999999999999987654 78999998764332 37799999999999 7999999999997654 4
Q ss_pred eEEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccc
Q 006522 420 KLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGL 499 (642)
Q Consensus 420 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGl 499 (642)
.++||||+++++|.+++...... ...+++..+..++.|++.||.|||+ .+++|+||+|+||++++++.+||+|||+
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~~~ql~~al~~lH~---~~i~H~~l~p~ni~~~~~~~~~l~d~~~ 159 (275)
T cd06608 84 LWLVMELCGGGSVTDLVKGLRKK-GKRLKEEWIAYILRETLRGLAYLHE---NKVIHRDIKGQNILLTKNAEVKLVDFGV 159 (275)
T ss_pred EEEEEEcCCCCcHHHHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHHHEEEccCCeEEECCCcc
Confidence 89999999999999998754311 1358999999999999999999999 8999999999999999999999999999
Q ss_pred cccCCCCCcccccceeeecCCCcccccCCCcccCcccccc----CCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCccc
Q 006522 500 NRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIY----GSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKG 575 (642)
Q Consensus 500 a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~ 575 (642)
+........ ......|+..|+|||++.. ...++.++|||||||++|||+||+.||.....
T Consensus 160 ~~~~~~~~~------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~---- 223 (275)
T cd06608 160 SAQLDSTLG------------RRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHP---- 223 (275)
T ss_pred ceecccchh------------hhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccch----
Confidence 876432210 0113457788999997532 23467899999999999999999999964221
Q ss_pred HHHHHHHHHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 576 LESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 576 l~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
.. .......... .....+ ......+.+++.+||..||++|||+.|+++
T Consensus 224 ~~-~~~~~~~~~~--~~~~~~--------~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 224 MR-ALFKIPRNPP--PTLKSP--------ENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred HH-HHHHhhccCC--CCCCch--------hhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 11 1111111111 111111 112235667899999999999999999975
No 328
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=2.9e-34 Score=295.64 Aligned_cols=265 Identities=17% Similarity=0.217 Sum_probs=189.8
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCcc-ccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCc------
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT-WRFKDFESEVEAIARVQHPNIVRLKAFYYANDE------ 419 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~------ 419 (642)
...||+|+||.||++.....+ +.||||.+...... .....+.+|++++++++||||+++++++...+.
T Consensus 17 ~~~lg~g~~~~v~~~~~~~~~-----~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 91 (310)
T cd07865 17 LAKIGQGTFGEVFKARHKKTK-----QIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYK 91 (310)
T ss_pred EEEeecCCCEEEEEEEECCCC-----cEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCC
Confidence 467999999999999987654 89999988654222 222456789999999999999999999876543
Q ss_pred --eEEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecc
Q 006522 420 --KLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGF 497 (642)
Q Consensus 420 --~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~Df 497 (642)
.++||||+.+ +|.+.+..... .+++.++..++.||+.||+|||+ .+++||||||+||+++.++.+||+||
T Consensus 92 ~~~~lv~e~~~~-~l~~~l~~~~~----~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dl~p~nil~~~~~~~kl~df 163 (310)
T cd07865 92 GSFYLVFEFCEH-DLAGLLSNKNV----KFTLSEIKKVMKMLLNGLYYIHR---NKILHRDMKAANILITKDGILKLADF 163 (310)
T ss_pred ceEEEEEcCCCc-CHHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEECCCCcEEECcC
Confidence 4999999975 88888865432 48999999999999999999999 89999999999999999999999999
Q ss_pred cccccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHH
Q 006522 498 GLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLE 577 (642)
Q Consensus 498 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~ 577 (642)
|++.......... ........++..|+|||.+.....++.++||||||+++|||+||+.||..... ....
T Consensus 164 g~~~~~~~~~~~~--------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~--~~~~ 233 (310)
T cd07865 164 GLARAFSLSKNSK--------PNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTE--QHQL 233 (310)
T ss_pred CCcccccCCcccC--------CCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCH--HHHH
Confidence 9998654332110 00011234677899999865544578899999999999999999999875322 1112
Q ss_pred HHHHHHHhccCC--CccccC--------------hhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 578 SLVRKAFRERRP--LSEVID--------------PALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 578 ~~~~~~~~~~~~--~~~~~d--------------~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
..+........+ .+...+ ...............+.+++.+||+.||++|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~ 306 (310)
T cd07865 234 TLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN 306 (310)
T ss_pred HHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence 222221111000 000000 000000000011234568999999999999999999875
No 329
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=9.2e-35 Score=291.18 Aligned_cols=245 Identities=19% Similarity=0.248 Sum_probs=193.7
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC--ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 424 (642)
.+.||.|+||.||++.....+ +.||+|.+.... .....+.+.+|++++++++||||+++++++...+..++|+
T Consensus 5 ~~~i~~g~~~~v~~~~~~~~~-----~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 79 (258)
T cd05578 5 LRVIGKGAFGKVCIVQKRDTK-----KMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVV 79 (258)
T ss_pred EEEeccCCCceEEEEEEccCC-----cEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEE
Confidence 467999999999999987654 789999997542 2234578999999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCC
Q 006522 425 DFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLP 504 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 504 (642)
||+++++|.+++.... ++++.....++.|+++||.|||+ .+++|+||||+||++++++.++|+|||++....
T Consensus 80 e~~~~~~L~~~l~~~~-----~l~~~~~~~~~~~i~~~l~~lh~---~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~ 151 (258)
T cd05578 80 DLLLGGDLRYHLSQKV-----KFSEEQVKFWICEIVLALEYLHS---KGIIHRDIKPDNILLDEQGHVHITDFNIATKVT 151 (258)
T ss_pred eCCCCCCHHHHHHhcC-----CcCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeEEcCCCCEEEeecccccccC
Confidence 9999999999997642 48899999999999999999999 899999999999999999999999999987654
Q ss_pred CCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHH
Q 006522 505 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAF 584 (642)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~ 584 (642)
... ......|+..|+|||.... ..++.++||||+|+++|+|++|+.||...... ..........
T Consensus 152 ~~~-------------~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~ 215 (258)
T cd05578 152 PDT-------------LTTSTSGTPGYMAPEVLCR-QGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT--IRDQIRAKQE 215 (258)
T ss_pred CCc-------------cccccCCChhhcCHHHHcc-cCCCCcccchhhHHHHHHHHhCCCCCCCCCcc--HHHHHHHHhc
Confidence 321 0113346777999998544 66899999999999999999999999754332 1122222211
Q ss_pred hccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCH--HHHH
Q 006522 585 RERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRM--RTVS 633 (642)
Q Consensus 585 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~--~ev~ 633 (642)
......+..++ ..+.+++.+||+.||.+||++ +|++
T Consensus 216 ~~~~~~~~~~~-------------~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 216 TADVLYPATWS-------------TEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred cccccCcccCc-------------HHHHHHHHHHccCChhHcCCccHHHHh
Confidence 12222222222 345568888999999999999 6654
No 330
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-35 Score=277.75 Aligned_cols=247 Identities=18% Similarity=0.301 Sum_probs=194.1
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcc-cCCCeeeEEEEEEeC----Cce
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYAN----DEK 420 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~----~~~ 420 (642)
+..+||-|-.|.|..++.+.++ ..+|+|++.+. ...++|+++--+. .|||||.+++.|.+. ...
T Consensus 66 s~qvLG~GinGkV~~C~~k~T~-----ekfALKvL~Ds------~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcL 134 (400)
T KOG0604|consen 66 SWQVLGAGINGKVVQCVHKRTQ-----EKFALKVLLDS------PKARREVELHWMASGHPHIVSIIDVYENSYQGRKCL 134 (400)
T ss_pred hhhhhccccCCceEEEEeccch-----hhhHHHHHhcC------HHHHhHhhhhhhhcCCCceEEeehhhhhhccCceee
Confidence 4578999999999999998876 78999999764 4456899887666 799999999998753 356
Q ss_pred EEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeC---CCCCeEEecc
Q 006522 421 LLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLD---DELHPCISGF 497 (642)
Q Consensus 421 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~---~~~~~kl~Df 497 (642)
.+|||.|+||.|+..+.+++.. .+++.+...|++||+.|+.|||+ ..|.||||||+|+|.. .+-.+||+||
T Consensus 135 LiVmE~meGGeLfsriq~~g~~---afTErea~eI~~qI~~Av~~lH~---~nIAHRDlKpENLLyt~t~~na~lKLtDf 208 (400)
T KOG0604|consen 135 LIVMECMEGGELFSRIQDRGDQ---AFTEREASEIMKQIGLAVRYLHS---MNIAHRDLKPENLLYTTTSPNAPLKLTDF 208 (400)
T ss_pred EeeeecccchHHHHHHHHcccc---cchHHHHHHHHHHHHHHHHHHHh---cchhhccCChhheeeecCCCCcceEeccc
Confidence 8999999999999999987753 59999999999999999999999 8999999999999995 4678999999
Q ss_pred cccccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHH
Q 006522 498 GLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLE 577 (642)
Q Consensus 498 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~ 577 (642)
|+|+...... ...+.+-|++|.|||+ ++..+|+...|+||+||++|-|++|.+||...... .+.
T Consensus 209 GFAK~t~~~~-------------~L~TPc~TPyYvaPev-lg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~--ais 272 (400)
T KOG0604|consen 209 GFAKETQEPG-------------DLMTPCFTPYYVAPEV-LGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL--AIS 272 (400)
T ss_pred ccccccCCCc-------------cccCCcccccccCHHH-hCchhcCCCCCccchhHHHHHhhcCCCcccccCCc--cCC
Confidence 9998754221 1225678999999999 55578999999999999999999999999865442 122
Q ss_pred HHHHH-HHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 578 SLVRK-AFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 578 ~~~~~-~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
.=.+. +......++ +|++. .-.+...++++..|..+|.+|.|+.|+++
T Consensus 273 pgMk~rI~~gqy~FP---~pEWs------~VSe~aKdlIR~LLkt~PteRlTI~~~m~ 321 (400)
T KOG0604|consen 273 PGMKRRIRTGQYEFP---EPEWS------CVSEAAKDLIRKLLKTEPTERLTIEEVMD 321 (400)
T ss_pred hhHHhHhhccCccCC---ChhHh------HHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence 22222 222222221 23221 11234556888999999999999999875
No 331
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=2.3e-34 Score=287.96 Aligned_cols=247 Identities=23% Similarity=0.320 Sum_probs=193.5
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCc-cccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEe
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA-TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
.+.||+|+||.||++....++ ..+|+|.+..... ....+.+.+|++++++++|+||+++++++...+..++|+|
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~-----~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e 79 (257)
T cd08225 5 IKKIGEGSFGKIYLAKAKSDS-----EHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVME 79 (257)
T ss_pred EEEecCCCcceEEEEEEcCCC-----ceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEe
Confidence 467999999999999997765 7899999865421 1233678899999999999999999999999999999999
Q ss_pred eccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCC-CeEEecccccccCC
Q 006522 426 FIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDEL-HPCISGFGLNRLLP 504 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~-~~kl~DfGla~~~~ 504 (642)
|+++++|.+++..... ..++|..+..++.|+++||+|||+ .+++|+||||+||++++++ .+|++|||.+....
T Consensus 80 ~~~~~~L~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lh~---~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~ 153 (257)
T cd08225 80 YCDGGDLMKRINRQRG---VLFSEDQILSWFVQISLGLKHIHD---RKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLN 153 (257)
T ss_pred cCCCCcHHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEEcCCCCeEEecccccchhcc
Confidence 9999999999976433 248999999999999999999999 8999999999999998875 46999999987654
Q ss_pred CCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHH
Q 006522 505 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAF 584 (642)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~ 584 (642)
.... ......|++.|+|||+... ..++.++|||||||++|||++|+.||... .....+....
T Consensus 154 ~~~~------------~~~~~~~~~~~~ape~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~-----~~~~~~~~~~ 215 (257)
T cd08225 154 DSME------------LAYTCVGTPYYLSPEICQN-RPYNNKTDIWSLGCVLYELCTLKHPFEGN-----NLHQLVLKIC 215 (257)
T ss_pred CCcc------------cccccCCCccccCHHHHcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCc-----cHHHHHHHHh
Confidence 3211 0112357788999998543 67889999999999999999999998642 2233333332
Q ss_pred hccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 585 RERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 585 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
.... ..+.+.. ...+.+++.+||+.+|++|||+.|+++
T Consensus 216 ~~~~---~~~~~~~---------~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 216 QGYF---APISPNF---------SRDLRSLISQLFKVSPRDRPSITSILK 253 (257)
T ss_pred cccC---CCCCCCC---------CHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 2221 1111111 124566888999999999999999975
No 332
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=6.8e-37 Score=283.22 Aligned_cols=252 Identities=20% Similarity=0.290 Sum_probs=194.6
Q ss_pred cccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcc-cCCCeeeEEEEEEeCCceEEEEee
Q 006522 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 348 ~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
..||.|+||+|+|-..+..+ +..|||+++........++++.|.+...+- +.||||+++|.+...+..++.||.
T Consensus 70 g~iG~G~fG~V~KM~hk~sg-----~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMEL 144 (361)
T KOG1006|consen 70 GEIGNGAFGTVNKMLHKPSG-----KLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMEL 144 (361)
T ss_pred HHhcCCcchhhhhhhcCccC-----cEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHH
Confidence 46899999999999888776 899999999876555568899999876555 799999999999999999999999
Q ss_pred ccCCcHHHHH---hcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccC
Q 006522 427 IRNGSLYAAL---HAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLL 503 (642)
Q Consensus 427 ~~~gsL~~~l---~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 503 (642)
|.- ||..+. +.... ..+++...-+|..-...||.||.+. ..|||||+||+|||+|..|.+|+||||++-.+
T Consensus 145 Md~-SlDklYk~vy~vq~---~~ipE~Ilg~ItvatV~AL~yLK~~--lkiIHRDvKPSNILldr~G~vKLCDFGIcGqL 218 (361)
T KOG1006|consen 145 MDI-SLDKLYKRVYSVQK---SRIPENILGHITVATVDALDYLKEE--LKIIHRDVKPSNILLDRHGDVKLCDFGICGQL 218 (361)
T ss_pred Hhh-hHHHHHHHHHHHHh---ccCcHhhhhheeeeehhHHHHHHHH--hhhhhccCChhheEEecCCCEeeecccchHhH
Confidence 954 765443 22222 2488888888999999999999875 68999999999999999999999999999776
Q ss_pred CCCCcccccceeeecCCCcccccCCCcccCccccccCCC-CCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHH
Q 006522 504 PGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSK-FTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRK 582 (642)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~ 582 (642)
..+.. .+.-+|...|||||.+..... |+-+|||||+|++|||+.||+.||..-. +..+.+..
T Consensus 219 v~SiA-------------kT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~----svfeql~~ 281 (361)
T KOG1006|consen 219 VDSIA-------------KTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWD----SVFEQLCQ 281 (361)
T ss_pred HHHHH-------------hhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHH----HHHHHHHH
Confidence 54321 113467778999998655444 8999999999999999999999987522 23444444
Q ss_pred HHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 583 AFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 583 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
...+.++ .+.... ...+....+..++-.|+-.|-..||+..++.+
T Consensus 282 Vv~gdpp---~l~~~~----~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 282 VVIGDPP---ILLFDK----ECVHYSFSMVRFINTCLIKDRSDRPKYDDLKK 326 (361)
T ss_pred HHcCCCC---eecCcc----cccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence 4444433 222111 11223456777888899999999999988754
No 333
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=6.5e-34 Score=296.71 Aligned_cols=261 Identities=23% Similarity=0.323 Sum_probs=190.8
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC-ccccHHHHHHHHHHHhcc-cCCCeeeEEEEEEeCC--ceEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARV-QHPNIVRLKAFYYAND--EKLL 422 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~--~~~l 422 (642)
...||+|+||.||+|....++ +.+|+|++.... .......+.+|+.+++++ +||||++++++|...+ ..++
T Consensus 12 ~~~lg~g~~~~v~~~~~~~~~-----~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~l 86 (337)
T cd07852 12 LQKLGKGAYGIVWKAIDRRTK-----EVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYL 86 (337)
T ss_pred hHhhcCCCCeeEEEEEEcCCC-----eEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEEE
Confidence 467999999999999987654 789999886531 222235678899999999 9999999999987543 5799
Q ss_pred EEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEeccccccc
Q 006522 423 ISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRL 502 (642)
Q Consensus 423 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 502 (642)
||||++ ++|.+++... .++|..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++.
T Consensus 87 v~e~~~-~~L~~~~~~~------~~~~~~~~~i~~qi~~~L~~LH~---~~i~H~dl~p~nill~~~~~~kl~d~g~~~~ 156 (337)
T cd07852 87 VFEYME-TDLHAVIRAN------ILEDVHKRYIMYQLLKALKYIHS---GNVIHRDLKPSNILLNSDCRVKLADFGLARS 156 (337)
T ss_pred Eecccc-cCHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEEeeccchhc
Confidence 999997 5999988753 38899999999999999999999 8999999999999999999999999999986
Q ss_pred CCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHH
Q 006522 503 LPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRK 582 (642)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~ 582 (642)
........ .........|+..|+|||.+.....++.++|||||||++|||+||+.||....... ........
T Consensus 157 ~~~~~~~~-------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~-~~~~~~~~ 228 (337)
T cd07852 157 LSELEENP-------ENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLN-QLEKIIEV 228 (337)
T ss_pred cccccccc-------cCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHH
Confidence 64332110 00011134578889999986655668899999999999999999999996532211 01110000
Q ss_pred HHhccCCCcc------------ccC-------hhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 006522 583 AFRERRPLSE------------VID-------PALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSES 635 (642)
Q Consensus 583 ~~~~~~~~~~------------~~d-------~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~ 635 (642)
...+..+ .++ ....... ......+.+++.+||+.||++|||+.++++.
T Consensus 229 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 229 ---IGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELL--PKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred ---hCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhc--cCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 0000000 000 0000000 0012456789999999999999999999863
No 334
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=2.4e-34 Score=289.01 Aligned_cols=254 Identities=19% Similarity=0.296 Sum_probs=193.2
Q ss_pred cCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCc--cccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEeec
Q 006522 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA--TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFI 427 (642)
Q Consensus 350 lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~ 427 (642)
||+|+||.||+++....+ +.+++|.+..... ....+.+.+|++++++++||||+++++.+......++||||+
T Consensus 1 lg~g~~~~vy~~~~~~~~-----~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 75 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTG-----DIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYL 75 (265)
T ss_pred CCCCCceEEEEEEECCCC-----CEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecC
Confidence 689999999999988654 7899999875422 233477899999999999999999999999999999999999
Q ss_pred cCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCCC
Q 006522 428 RNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTS 507 (642)
Q Consensus 428 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 507 (642)
++++|.+++.... .+++..+..++.|++.||+|||+ .+++||||+|+||++++++.+||+|||++.......
T Consensus 76 ~~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~~L~~lH~---~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~ 147 (265)
T cd05579 76 PGGDLASLLENVG-----SLDEDVARIYIAEIVLALEYLHS---NGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRR 147 (265)
T ss_pred CCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHH---cCeecCCCCHHHeEEcCCCCEEEEecccchhcccCc
Confidence 9999999997643 38999999999999999999999 899999999999999999999999999987543221
Q ss_pred cccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHhcc
Q 006522 508 KVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRER 587 (642)
Q Consensus 508 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~~~ 587 (642)
...... .........++..|+|||.... ...+.++||||||+++||++||+.||.... ............
T Consensus 148 ~~~~~~----~~~~~~~~~~~~~~~~Pe~~~~-~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~-----~~~~~~~~~~~~ 217 (265)
T cd05579 148 QINLND----DEKEDKRIVGTPDYIAPEVILG-QGHSKTVDWWSLGCILYEFLVGIPPFHGET-----PEEIFQNILNGK 217 (265)
T ss_pred cccccc----ccccccCcccCccccCHHHhcC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHhcCC
Confidence 100000 0001113456778999998544 568899999999999999999999997432 122233322222
Q ss_pred CCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHH
Q 006522 588 RPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 637 (642)
Q Consensus 588 ~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~ 637 (642)
.+...... ....+.+++.+||+.+|++|||+.++.+.|+
T Consensus 218 ~~~~~~~~-----------~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~ 256 (265)
T cd05579 218 IEWPEDVE-----------VSDEAIDLISKLLVPDPEKRLGAKSIEEIKN 256 (265)
T ss_pred cCCCcccc-----------CCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence 22111110 0134566888899999999999955555443
No 335
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=5.4e-34 Score=291.46 Aligned_cols=260 Identities=18% Similarity=0.241 Sum_probs=188.3
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCc-cccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEe
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA-TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
...||+|++|.||+|.....+ +.||+|.+..... ....+.+.+|++++++++||||+++++++...+..++|||
T Consensus 7 ~~~l~~g~~~~v~~~~~~~~~-----~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 7 VEKIGEGTYGVVYKARDRVTN-----ETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred EEEecCCCCEEEEEEEecCCC-----cEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 457899999999999987654 7899999865422 2223678899999999999999999999999999999999
Q ss_pred eccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCC-CCCeEEecccccccCC
Q 006522 426 FIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDD-ELHPCISGFGLNRLLP 504 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~-~~~~kl~DfGla~~~~ 504 (642)
|++ ++|.+++..... ..+++.....++.||+.||+|||+ .+++||||||+||+++. ++.+||+|||+++...
T Consensus 82 ~~~-~~l~~~~~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~---~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~ 154 (294)
T PLN00009 82 YLD-LDLKKHMDSSPD---FAKNPRLIKTYLYQILRGIAYCHS---HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFG 154 (294)
T ss_pred ccc-ccHHHHHHhCCC---CCcCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCcceEEEECCCCEEEEcccccccccC
Confidence 996 588888765432 236788889999999999999999 89999999999999985 5679999999997543
Q ss_pred CCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHH
Q 006522 505 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAF 584 (642)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~ 584 (642)
.... ......++..|+|||++.....++.++||||+||++|||+||+.||...... ..+..... ..
T Consensus 155 ~~~~------------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~-~~~~~~~~-~~ 220 (294)
T PLN00009 155 IPVR------------TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEI-DELFKIFR-IL 220 (294)
T ss_pred CCcc------------ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHH-Hh
Confidence 2210 0012345678999998655456789999999999999999999999753221 11111111 00
Q ss_pred hccC-CC--------------ccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 585 RERR-PL--------------SEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 585 ~~~~-~~--------------~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
.... .. .......+... ......++.+++.+|++.+|++||++.++++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 221 GTPNEETWPGVTSLPDYKSAFPKWPPKDLATV--VPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred CCCChhhccccccchhhhhhcccCCCCCHHHh--CcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0000 00 00000000000 0011234677999999999999999999985
No 336
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=5.7e-35 Score=319.73 Aligned_cols=258 Identities=22% Similarity=0.307 Sum_probs=187.2
Q ss_pred cccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEe-----------
Q 006522 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYA----------- 416 (642)
Q Consensus 348 ~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~----------- 416 (642)
.+||+||||.|||++.+-++ +.+|||++.-.........+.+|+.++++|+|||||+++..+.+
T Consensus 485 ~lLGkGGFG~VvkVRNKlDG-----r~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ei~ 559 (1351)
T KOG1035|consen 485 ELLGKGGFGSVVKVRNKLDG-----REYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLEIV 559 (1351)
T ss_pred HHhcCCCCceEEEEeecccc-----hhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccccccc
Confidence 68999999999999998876 89999999876544445788999999999999999999854210
Q ss_pred --------------------------------------------C-----------------------------------
Q 006522 417 --------------------------------------------N----------------------------------- 417 (642)
Q Consensus 417 --------------------------------------------~----------------------------------- 417 (642)
.
T Consensus 560 ~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e~~ 639 (1351)
T KOG1035|consen 560 ASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSEGS 639 (1351)
T ss_pred ccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccCCc
Confidence 0
Q ss_pred -----------------------------CceEEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh
Q 006522 418 -----------------------------DEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHE 468 (642)
Q Consensus 418 -----------------------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~ 468 (642)
...|+=||||+.-.++++++++.... .-...++++++|+.||+|+|+
T Consensus 640 ~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~----~~d~~wrLFreIlEGLaYIH~ 715 (1351)
T KOG1035|consen 640 VILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS----QRDEAWRLFREILEGLAYIHD 715 (1351)
T ss_pred cccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch----hhHHHHHHHHHHHHHHHHHHh
Confidence 11378899999977777777654321 246678999999999999999
Q ss_pred cCCCCceecCCCCCCeeeCCCCCeEEecccccccCCC---CCc---ccccceeeecCCCcccccCCCcccCccccccCC-
Q 006522 469 YSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPG---TSK---VTKNETIVTSGTGSRISAISNVYLAPEARIYGS- 541 (642)
Q Consensus 469 ~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~---~~~---~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~- 541 (642)
++||||||||.||++|++..+||+|||+|+.... ... ...+..........+..+||..|+|||++....
T Consensus 716 ---~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~ 792 (1351)
T KOG1035|consen 716 ---QGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSS 792 (1351)
T ss_pred ---CceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccccc
Confidence 8999999999999999999999999999987321 100 001111111111234578999999999866544
Q ss_pred -CCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHhccCCCc-cccChhhhhchhHHHHHHHHHHHHHhcC
Q 006522 542 -KFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLS-EVIDPALVKEIHAKRQVLATFHIALNCT 619 (642)
Q Consensus 542 -~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~d~~l~~~~~~~~~~~~~~~l~~~Cl 619 (642)
.|+.|+|+||+|||++||+. ||... ..-...+.......-|.+ ...++... .-.+++.+++
T Consensus 793 ~~Yn~KiDmYSLGIVlFEM~y---PF~Ts----MERa~iL~~LR~g~iP~~~~f~~~~~~----------~e~slI~~Ll 855 (1351)
T KOG1035|consen 793 NKYNSKIDMYSLGIVLFEMLY---PFGTS----MERASILTNLRKGSIPEPADFFDPEHP----------EEASLIRWLL 855 (1351)
T ss_pred ccccchhhhHHHHHHHHHHhc---cCCch----HHHHHHHHhcccCCCCCCcccccccch----------HHHHHHHHHh
Confidence 69999999999999999995 66542 122233333322222211 11233221 2245889999
Q ss_pred CCCCCCCCCHHHHHH
Q 006522 620 ELDPEFRPRMRTVSE 634 (642)
Q Consensus 620 ~~dP~~RPs~~ev~~ 634 (642)
+.||.+|||+.|++.
T Consensus 856 ~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 856 SHDPSKRPTATELLN 870 (1351)
T ss_pred cCCCccCCCHHHHhh
Confidence 999999999999875
No 337
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=5.9e-34 Score=293.34 Aligned_cols=261 Identities=21% Similarity=0.279 Sum_probs=189.1
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCcc-ccHHHHHHHHHHHhcccCCCeeeEEEEEEeC--CceEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT-WRFKDFESEVEAIARVQHPNIVRLKAFYYAN--DEKLLI 423 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~lv 423 (642)
.+.||+|+||.||++.....+ ..||+|.++..... .....+.+|+.++++++|+||+++++++... +..++|
T Consensus 12 ~~~ig~g~~~~v~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 86 (309)
T cd07845 12 LNRIGEGTYGIVYRARDTTSG-----EIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFLV 86 (309)
T ss_pred eeeeeecCCEEEEEEEECCCC-----cEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEEE
Confidence 467999999999999987654 78999998754221 1224567899999999999999999999765 468999
Q ss_pred EeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccC
Q 006522 424 SDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLL 503 (642)
Q Consensus 424 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 503 (642)
|||+++ +|.+++.... ..+++..+..++.|+++||+|||+ .+++||||||+||++++++.+||+|||+++..
T Consensus 87 ~e~~~~-~l~~~l~~~~----~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~ 158 (309)
T cd07845 87 MEYCEQ-DLASLLDNMP----TPFSESQVKCLMLQLLRGLQYLHE---NFIIHRDLKVSNLLLTDKGCLKIADFGLARTY 158 (309)
T ss_pred EecCCC-CHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEECccceeeec
Confidence 999975 8988887543 248999999999999999999999 89999999999999999999999999999865
Q ss_pred CCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHH
Q 006522 504 PGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKA 583 (642)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~ 583 (642)
...... .....++..|+|||.+.....++.++||||+||++|||++|+.||..... ......+...
T Consensus 159 ~~~~~~------------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~--~~~~~~~~~~ 224 (309)
T cd07845 159 GLPAKP------------MTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSE--IEQLDLIIQL 224 (309)
T ss_pred CCccCC------------CCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHh
Confidence 432100 01123466799999865545688999999999999999999999975322 1111111111
Q ss_pred HhccC-CCc---------cc--cChhhhhchhH--HHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 584 FRERR-PLS---------EV--IDPALVKEIHA--KRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 584 ~~~~~-~~~---------~~--~d~~l~~~~~~--~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
..... ... .. +...-...... ......+.+++.+|++.||++|||+.|+++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~ 289 (309)
T cd07845 225 LGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE 289 (309)
T ss_pred cCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 10000 000 00 00000000000 001245668999999999999999999885
No 338
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=3e-34 Score=294.54 Aligned_cols=260 Identities=21% Similarity=0.288 Sum_probs=190.1
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCc-cccHHHHHHHHHHHhcccCCCeeeEEEEEEeCC-------
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA-TWRFKDFESEVEAIARVQHPNIVRLKAFYYAND------- 418 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~------- 418 (642)
...||+|+||.||+|.....+ +.||+|.++.... ......+.+|++++++++||||+++++++...+
T Consensus 12 ~~~lg~g~~g~v~~~~~~~~~-----~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~~ 86 (302)
T cd07864 12 IGQIGEGTYGQVYKARDKDTG-----ELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFKK 86 (302)
T ss_pred eeeecccCCEEEEEEEECCCC-----cEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhccc
Confidence 467999999999999997754 7899999875422 222356788999999999999999999987654
Q ss_pred ---ceEEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEe
Q 006522 419 ---EKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCIS 495 (642)
Q Consensus 419 ---~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~ 495 (642)
..++|+||+++ ++.+.+.... ..+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+
T Consensus 87 ~~~~~~lv~e~~~~-~l~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~---~~i~H~dl~p~nili~~~~~~kl~ 158 (302)
T cd07864 87 DKGAFYLVFEYMDH-DLMGLLESGL----VHFSEDHIKSFMKQLLEGLNYCHK---KNFLHRDIKCSNILLNNKGQIKLA 158 (302)
T ss_pred cCCcEEEEEcccCc-cHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCcEEeC
Confidence 78999999986 7777776542 248999999999999999999999 899999999999999999999999
Q ss_pred cccccccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCccc
Q 006522 496 GFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKG 575 (642)
Q Consensus 496 DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~ 575 (642)
|||++......... ......++..|+|||.+.....++.++|||||||++|||++|+.||..... ..
T Consensus 159 dfg~~~~~~~~~~~-----------~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~--~~ 225 (302)
T cd07864 159 DFGLARLYNSEESR-----------PYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQE--LA 225 (302)
T ss_pred cccccccccCCccc-----------ccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh--HH
Confidence 99998866433210 001123456799999865545678999999999999999999999974321 11
Q ss_pred HHHHHHHHHhccCC--Ccccc--------Ch------hhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 576 LESLVRKAFRERRP--LSEVI--------DP------ALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 576 l~~~~~~~~~~~~~--~~~~~--------d~------~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
....+........+ .+... ++ .+..... .....+.+++..||+.||++||++.++++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 226 QLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFS--FIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred HHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcC--CCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 11112221111100 00000 00 0000000 01235678999999999999999999875
No 339
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=4.1e-34 Score=291.40 Aligned_cols=257 Identities=21% Similarity=0.280 Sum_probs=195.0
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCc---cccHHHHHHHHHHHhcc-cCCCeeeEEEEEEeCCceEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA---TWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLL 422 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~l 422 (642)
...||+|++|.||++....... ..+.||||.+++... ....+.+.+|++++.++ +||||+++++.+......++
T Consensus 5 ~~~ig~G~~~~vy~~~~~~~~~--~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~l 82 (288)
T cd05583 5 LRVLGTGAYGKVFLVRKVGGHD--AGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLHL 82 (288)
T ss_pred EEEeccCCCceEEEEEEecccc--CCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEEE
Confidence 4679999999999998653221 127899999875321 22236788999999999 69999999999999999999
Q ss_pred EEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEeccccccc
Q 006522 423 ISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRL 502 (642)
Q Consensus 423 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 502 (642)
||||+++|+|.+++.... .+++.....++.|+++||+|||+ .+++||||||+||+++.++.++|+|||+++.
T Consensus 83 v~e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~ql~~~l~~lH~---~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~ 154 (288)
T cd05583 83 ILDYVNGGELFTHLYQRE-----HFTESEVRVYIAEIVLALDHLHQ---LGIIYRDIKLENILLDSEGHVVLTDFGLSKE 154 (288)
T ss_pred EEecCCCCcHHHHHhhcC-----CcCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEEECccccc
Confidence 999999999999987543 38899999999999999999999 8999999999999999999999999999876
Q ss_pred CCCCCcccccceeeecCCCcccccCCCcccCccccccCC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHH
Q 006522 503 LPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGS-KFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVR 581 (642)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~ 581 (642)
....... ......|+..|+|||...... ..+.++||||||+++|||+||+.||..... ......+.+
T Consensus 155 ~~~~~~~-----------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~-~~~~~~~~~ 222 (288)
T cd05583 155 FLAEEEE-----------RAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGE-QNSQSEISR 222 (288)
T ss_pred ccccccc-----------ccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcc-cchHHHHHH
Confidence 5432110 011235677899999854322 368899999999999999999999964222 112233333
Q ss_pred HHHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHh
Q 006522 582 KAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDR 638 (642)
Q Consensus 582 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~ 638 (642)
.......+.+..+++. +.+++.+||+.||++|||+.++.+.|+.
T Consensus 223 ~~~~~~~~~~~~~~~~-------------l~~li~~~l~~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 223 RILKSKPPFPKTMSAE-------------ARDFIQKLLEKDPKKRLGANGADEIKNH 266 (288)
T ss_pred HHHccCCCCCcccCHH-------------HHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence 3333333333333332 3457888999999999999888776653
No 340
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=8e-34 Score=289.60 Aligned_cols=253 Identities=19% Similarity=0.272 Sum_probs=191.9
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC---ccccHHHHHHHHHHHhcc-cCCCeeeEEEEEEeCCceEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD---ATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLL 422 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~l 422 (642)
...||+|+||.||++....+... ...||+|++.... .....+.+.+|++++.++ +|+||+++++++..+...++
T Consensus 5 ~~~lg~G~~g~v~~~~~~~~~~~--g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~l 82 (290)
T cd05613 5 LKVLGTGAYGKVFLVRKVSGHDS--GKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLHL 82 (290)
T ss_pred eeeeccCCcceEEEEEeccCCCC--CceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEEE
Confidence 45789999999999987542211 1789999987532 122236788999999999 69999999999999989999
Q ss_pred EEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEeccccccc
Q 006522 423 ISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRL 502 (642)
Q Consensus 423 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 502 (642)
||||+++++|.+++.... ++++.....++.|++.||+|||+ .+++||||||+||++++++.+||+|||+++.
T Consensus 83 v~e~~~~~~L~~~l~~~~-----~l~~~~~~~~~~qi~~al~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~ 154 (290)
T cd05613 83 ILDYINGGELFTHLSQRE-----RFKEQEVQIYSGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKE 154 (290)
T ss_pred EEecCCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeEECCCCCEEEeeCcccee
Confidence 999999999999997643 48889999999999999999999 8999999999999999999999999999876
Q ss_pred CCCCCcccccceeeecCCCcccccCCCcccCccccccC-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHH
Q 006522 503 LPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYG-SKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVR 581 (642)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~ 581 (642)
....... ......|+..|+|||..... ..++.++||||||+++|||+||+.||..... ......+..
T Consensus 155 ~~~~~~~-----------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~-~~~~~~~~~ 222 (290)
T cd05613 155 FHEDEVE-----------RAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGE-KNSQAEISR 222 (290)
T ss_pred ccccccc-----------ccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCc-cccHHHHHH
Confidence 5332110 01123577889999985432 3467899999999999999999999964222 222333444
Q ss_pred HHHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCC-----CHHHHHH
Q 006522 582 KAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRP-----RMRTVSE 634 (642)
Q Consensus 582 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----s~~ev~~ 634 (642)
.......+.+..+++ .+.+++.+||+.||++|| +..++++
T Consensus 223 ~~~~~~~~~~~~~~~-------------~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 223 RILKSEPPYPQEMSA-------------LAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred HhhccCCCCCccCCH-------------HHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 333333333333333 234578889999999997 5666654
No 341
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=2.4e-34 Score=299.47 Aligned_cols=262 Identities=19% Similarity=0.293 Sum_probs=191.2
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCc-cccHHHHHHHHHHHhcccCCCeeeEEEEEEeC----CceE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA-TWRFKDFESEVEAIARVQHPNIVRLKAFYYAN----DEKL 421 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~----~~~~ 421 (642)
...||+|++|.||++.....+ ..||+|++..... ....+.+.+|+.++++++||||+++++++... ...+
T Consensus 10 ~~~lg~g~~g~v~~~~~~~~~-----~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (334)
T cd07855 10 IENIGSGAYGVVCSAIDTRSG-----KKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVY 84 (334)
T ss_pred eeeeecCCCeEEEEEEEcCCC-----CEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEE
Confidence 357999999999999988765 7999999876422 23346788999999999999999999988643 4679
Q ss_pred EEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccc
Q 006522 422 LISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNR 501 (642)
Q Consensus 422 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 501 (642)
+||||+. |+|.+++.... .+++..+..++.||+.||+|||+ .+|+||||||+||++++++.+||+|||+++
T Consensus 85 lv~e~~~-~~l~~~~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~ 155 (334)
T cd07855 85 VVMDLME-SDLHHIIHSDQ-----PLTEEHIRYFLYQLLRGLKYIHS---ANVIHRDLKPSNLLVNEDCELRIGDFGMAR 155 (334)
T ss_pred EEEehhh-hhHHHHhccCC-----CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEecccccce
Confidence 9999996 59999986543 38999999999999999999999 899999999999999999999999999987
Q ss_pred cCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHH
Q 006522 502 LLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVR 581 (642)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~ 581 (642)
........ .........|+..|+|||.+.....++.++|||||||++|||++|+.||...... .....+.
T Consensus 156 ~~~~~~~~--------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~--~~~~~~~ 225 (334)
T cd07855 156 GLSSSPTE--------HKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYV--HQLKLIL 225 (334)
T ss_pred eecccCcC--------CCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChH--HHHHHHH
Confidence 65432111 0000113467788999998655456899999999999999999999999753221 1111111
Q ss_pred HHHhccCCCccccC----hhhhhc---------h--h--HHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 582 KAFRERRPLSEVID----PALVKE---------I--H--AKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 582 ~~~~~~~~~~~~~d----~~l~~~---------~--~--~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
..... +..+..+ ..+... . . .......+.+++.+||+.+|++||++.+++.
T Consensus 226 ~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 293 (334)
T cd07855 226 SVLGS--PSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQ 293 (334)
T ss_pred HHhCC--ChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 11000 0000000 000000 0 0 0011345778999999999999999999876
No 342
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=1.2e-33 Score=283.80 Aligned_cols=251 Identities=21% Similarity=0.360 Sum_probs=198.3
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
.+.||+|++|.||++.....+ +.|+||++.........+.+.+|+.++.+++|+||+++++++...+..++||||
T Consensus 6 ~~~i~~g~~~~v~~~~~~~~~-----~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06623 6 VKVLGQGSSGVVYKVRHKPTG-----KIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY 80 (264)
T ss_pred eeeeeecCCeEEEEEEEcCCC-----cEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence 468999999999999998754 899999987754433447899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCC
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 506 (642)
+++++|.+++.... .+++..+..++.|+++||+|||+. .+++||||+|+||+++.++.++|+|||.+......
T Consensus 81 ~~~~~L~~~l~~~~-----~l~~~~~~~~~~~l~~~l~~lh~~--~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~ 153 (264)
T cd06623 81 MDGGSLADLLKKVG-----KIPEPVLAYIARQILKGLDYLHTK--RHIIHRDIKPSNLLINSKGEVKIADFGISKVLENT 153 (264)
T ss_pred cCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHhcc--CCCccCCCCHHHEEECCCCCEEEccCccceecccC
Confidence 99999999997652 489999999999999999999973 48999999999999999999999999998765433
Q ss_pred CcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHhc
Q 006522 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE 586 (642)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~~ 586 (642)
.... ....++..|+|||.... ..++.++||||||+++|||+||+.||..... .............
T Consensus 154 ~~~~------------~~~~~~~~y~~pE~~~~-~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~--~~~~~~~~~~~~~ 218 (264)
T cd06623 154 LDQC------------NTFVGTVTYMSPERIQG-ESYSYAADIWSLGLTLLECALGKFPFLPPGQ--PSFFELMQAICDG 218 (264)
T ss_pred CCcc------------cceeecccccCHhhhCC-CCCCchhhHHHHHHHHHHHHhCCCCCccccc--cCHHHHHHHHhcC
Confidence 2110 12346677999998544 6788999999999999999999999975432 1222333333222
Q ss_pred cCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 006522 587 RRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSES 635 (642)
Q Consensus 587 ~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~ 635 (642)
..+ .++... ....+.+++.+||+.+|++||++.|+++.
T Consensus 219 ~~~---~~~~~~--------~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 219 PPP---SLPAEE--------FSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred CCC---CCCccc--------CCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 111 111110 11345668888999999999999999863
No 343
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=1.3e-33 Score=287.45 Aligned_cols=246 Identities=21% Similarity=0.313 Sum_probs=193.4
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
...+|+|++|.||++.....+ ..+++|.+..... ..+.+.+|++++++++|+||+++++++...+..++|+||
T Consensus 24 ~~~l~~g~~~~v~~~~~~~~~-----~~~~iK~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 96 (286)
T cd06614 24 LEKIGEGASGEVYKATDRATG-----KEVAIKKMRLRKQ--NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEY 96 (286)
T ss_pred hHhccCCCCeEEEEEEEccCC-----cEEEEEEEecCch--hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEec
Confidence 357899999999999988654 7899999976543 347889999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCC
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 506 (642)
+++++|.+++.... ..+++..+..++.|++.||+|||+ .+++|+||||+||+++.++.+||+|||++......
T Consensus 97 ~~~~~L~~~l~~~~----~~l~~~~~~~i~~~i~~~L~~lH~---~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 169 (286)
T cd06614 97 MDGGSLTDIITQNF----VRMNEPQIAYVCREVLQGLEYLHS---QNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKE 169 (286)
T ss_pred cCCCcHHHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCChhhEEEcCCCCEEECccchhhhhccc
Confidence 99999999998754 249999999999999999999999 89999999999999999999999999988654322
Q ss_pred CcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHhc
Q 006522 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE 586 (642)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~~ 586 (642)
.. ......++..|+|||.+. +..++.++|||||||++|||+||+.||..... . .........
T Consensus 170 ~~------------~~~~~~~~~~y~~PE~~~-~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~----~-~~~~~~~~~ 231 (286)
T cd06614 170 KS------------KRNSVVGTPYWMAPEVIK-RKDYGPKVDIWSLGIMCIEMAEGEPPYLREPP----L-RALFLITTK 231 (286)
T ss_pred hh------------hhccccCCcccCCHhHhc-CCCCCCccccHHHHHHHHHHHhCCCCCCCCCH----H-HHHHHHHhc
Confidence 10 011234667899999854 46789999999999999999999999864221 1 111111111
Q ss_pred cCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 587 RRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 587 ~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
.. ....++. .....+.+++.+||+.+|.+||++.++++
T Consensus 232 ~~--~~~~~~~--------~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 269 (286)
T cd06614 232 GI--PPLKNPE--------KWSPEFKDFLNKCLVKDPEKRPSAEELLQ 269 (286)
T ss_pred CC--CCCcchh--------hCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 11 1111111 01124556889999999999999999985
No 344
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=2.8e-34 Score=301.33 Aligned_cols=193 Identities=20% Similarity=0.306 Sum_probs=160.5
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC-ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCC------c
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYAND------E 419 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~------~ 419 (642)
...||+|+||.||++.....+ +.||+|.+.... .....+++.+|+.++++++||||+++++++.... .
T Consensus 21 ~~~lg~g~~g~V~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 95 (353)
T cd07850 21 LKPIGSGAQGIVCAAYDTVTG-----QNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQD 95 (353)
T ss_pred EEEeccCCCEEEEEEEECCCC-----CEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccCc
Confidence 467999999999999987765 899999986532 2223367788999999999999999999987543 4
Q ss_pred eEEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccc
Q 006522 420 KLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGL 499 (642)
Q Consensus 420 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGl 499 (642)
.++||||+. ++|.+.+.. .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+
T Consensus 96 ~~lv~e~~~-~~l~~~~~~-------~l~~~~~~~~~~ql~~aL~~LH~---~gi~H~dlkp~Nil~~~~~~~kL~Dfg~ 164 (353)
T cd07850 96 VYLVMELMD-ANLCQVIQM-------DLDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGL 164 (353)
T ss_pred EEEEEeccC-CCHHHHHhh-------cCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEccCcc
Confidence 699999996 488888753 27888999999999999999999 8999999999999999999999999999
Q ss_pred cccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCC
Q 006522 500 NRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGP 569 (642)
Q Consensus 500 a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~ 569 (642)
++....... .....++..|+|||.+. +..++.++|||||||++|+|++|+.||...
T Consensus 165 ~~~~~~~~~-------------~~~~~~~~~y~aPE~~~-~~~~~~~~DvwslG~~l~~l~~g~~pf~~~ 220 (353)
T cd07850 165 ARTAGTSFM-------------MTPYVVTRYYRAPEVIL-GMGYKENVDIWSVGCIMGEMIRGTVLFPGT 220 (353)
T ss_pred ceeCCCCCC-------------CCCCcccccccCHHHHh-CCCCCCchhhHhHHHHHHHHHHCCCCCCCC
Confidence 976533210 11235677899999854 477899999999999999999999999753
No 345
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.9e-35 Score=275.88 Aligned_cols=269 Identities=18% Similarity=0.257 Sum_probs=202.0
Q ss_pred cHHHHHhhcccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcc-cCCCeeeEEEEEEe
Q 006522 338 ELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYA 416 (642)
Q Consensus 338 ~~~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~ 416 (642)
.++++.+-+.++||+|+++.|-.++.-.++ +.+|||++.+.. .....++.+|++++.+. .|+||+.++++|++
T Consensus 74 ~F~d~YkLt~e~LGeGAyasVqtcv~i~t~-----~EYAVKiidKq~-gHsR~RvfREVe~f~~Cqgh~nilqLiefFEd 147 (463)
T KOG0607|consen 74 KFEDMYKLTSELLGEGAYASVQTCVSIQTG-----KEYAVKIIDKQP-GHSRSRVFREVETFYQCQGHKNILQLIEFFED 147 (463)
T ss_pred hHHHHHHhHHHHhcCccceeeeeeeeeccc-----hhhhhhhhhcCC-chHHHHHHHHHHHHHHhcCCccHHHHHHHhcc
Confidence 356777778899999999999988876655 899999998763 33447889999999999 69999999999999
Q ss_pred CCceEEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCC---CCeE
Q 006522 417 NDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDE---LHPC 493 (642)
Q Consensus 417 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~---~~~k 493 (642)
+...|||||-|.||+|..+|+++.. +++....++.++||.||.|||. ++|.||||||+|||-.+- --+|
T Consensus 148 d~~FYLVfEKm~GGplLshI~~~~~-----F~E~EAs~vvkdia~aLdFlH~---kgIAHRDlKPENiLC~~pn~vsPvK 219 (463)
T KOG0607|consen 148 DTRFYLVFEKMRGGPLLSHIQKRKH-----FNEREASRVVKDIASALDFLHT---KGIAHRDLKPENILCESPNKVSPVK 219 (463)
T ss_pred cceEEEEEecccCchHHHHHHHhhh-----ccHHHHHHHHHHHHHHHHHHhh---cCcccccCCccceeecCCCCcCcee
Confidence 9999999999999999999988764 8999999999999999999999 899999999999998543 3489
Q ss_pred EecccccccCCCCCcccccceeeecCCCcccccCCCcccCcccc---cc-CCCCCcccchHHHHHHHHHHHhCCCCCCCC
Q 006522 494 ISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEAR---IY-GSKFTQKCDVYSFGIVLLEILTGRLPDAGP 569 (642)
Q Consensus 494 l~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~---~~-~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~ 569 (642)
|+||-+..-........ ........+.+|+..|||||+. .. ...|+.+.|.||+|||||-|+.|..||.+.
T Consensus 220 iCDfDLgSg~k~~~~~s-----pastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~ 294 (463)
T KOG0607|consen 220 ICDFDLGSGIKLNNDCS-----PASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGH 294 (463)
T ss_pred eeccccccccccCCCCC-----CCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCc
Confidence 99998775433221111 0111122356899999999972 11 246899999999999999999999999875
Q ss_pred CCCcc----------cHHHHHHHHHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 570 ENDGK----------GLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 570 ~~~~~----------~l~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
-..+- .-..+++.+..+...+++ .++.. + ..+..+++...+..|+.+|.++.++++
T Consensus 295 Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPd---kdWah-I-----S~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 295 CGADCGWDRGEVCRVCQNKLFESIQEGKYEFPD---KDWAH-I-----SSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred cCCcCCccCCCccHHHHHHHHHHHhccCCcCCh---hhhHH-h-----hHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 43211 122233333333333322 22211 1 123345666677799999998888765
No 346
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=4.9e-34 Score=292.06 Aligned_cols=251 Identities=21% Similarity=0.339 Sum_probs=189.3
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcc-cCCCeeeEEEEEEeCCceEEEE
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLIS 424 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~ 424 (642)
....||+|++|.||++.....+ +.||||+++.........++.+|+.++.+. +||||+++++++......++||
T Consensus 19 ~~~~lg~g~~~~v~~~~~~~~~-----~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~ 93 (296)
T cd06618 19 NLGEIGSGTCGQVYKMRFKKTG-----HVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICM 93 (296)
T ss_pred eeeEeeccCCeEEEEEEECCCC-----eEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEe
Confidence 4578999999999999988754 899999997654333346677888877777 4999999999999999999999
Q ss_pred eeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCC
Q 006522 425 DFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLP 504 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 504 (642)
||+++ ++.+++..... .+++..+..++.|+++||+|||+. .+|+||||||+||++++++.+||+|||++....
T Consensus 94 e~~~~-~l~~l~~~~~~----~l~~~~~~~i~~~i~~~l~~lH~~--~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~ 166 (296)
T cd06618 94 ELMST-CLDKLLKRIQG----PIPEDILGKMTVAIVKALHYLKEK--HGVIHRDVKPSNILLDASGNVKLCDFGISGRLV 166 (296)
T ss_pred eccCc-CHHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhh--CCEecCCCcHHHEEEcCCCCEEECccccchhcc
Confidence 99854 77777655332 589999999999999999999972 489999999999999999999999999987653
Q ss_pred CCCcccccceeeecCCCcccccCCCcccCccccccC---CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHH
Q 006522 505 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYG---SKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVR 581 (642)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~ 581 (642)
.... .....++..|+|||.+... ..++.++||||||+++|||++|+.||...... .....
T Consensus 167 ~~~~-------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~----~~~~~ 229 (296)
T cd06618 167 DSKA-------------KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTE----FEVLT 229 (296)
T ss_pred CCCc-------------ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhH----HHHHH
Confidence 2211 0122466789999985432 23788999999999999999999999642221 12222
Q ss_pred HHHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 006522 582 KAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSES 635 (642)
Q Consensus 582 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~ 635 (642)
.......+... ... ....++.+++.+||+.||++||++.++++.
T Consensus 230 ~~~~~~~~~~~--~~~--------~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 230 KILQEEPPSLP--PNE--------GFSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred HHhcCCCCCCC--CCC--------CCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 22222211110 000 011245678899999999999999999753
No 347
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=5.2e-34 Score=297.23 Aligned_cols=270 Identities=17% Similarity=0.179 Sum_probs=193.2
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccc-------------cHHHHHHHHHHHhcccCCCeeeEEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATW-------------RFKDFESEVEAIARVQHPNIVRLKAF 413 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~-------------~~~~~~~E~~~l~~l~H~nIv~l~~~ 413 (642)
...||+|+||.||++.....+ +.||||.++...... ....+.+|++++++++||||++++++
T Consensus 14 ~~~ig~G~~g~vy~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~ 88 (335)
T PTZ00024 14 GAHLGEGTYGKVEKAYDTLTG-----KIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDV 88 (335)
T ss_pred hhcccCCCceeEEEEEECCCC-----CeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEE
Confidence 467999999999999987654 899999987542211 01257899999999999999999999
Q ss_pred EEeCCceEEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeE
Q 006522 414 YYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPC 493 (642)
Q Consensus 414 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~k 493 (642)
+...+..++||||+. |+|.+++.... .+++.....++.|++.||+|||+ .+++||||||+||+++.++.+|
T Consensus 89 ~~~~~~~~lv~e~~~-~~l~~~l~~~~-----~~~~~~~~~~~~ql~~aL~~LH~---~~i~H~dl~~~nill~~~~~~k 159 (335)
T PTZ00024 89 YVEGDFINLVMDIMA-SDLKKVVDRKI-----RLTESQVKCILLQILNGLNVLHK---WYFMHRDLSPANIFINSKGICK 159 (335)
T ss_pred EecCCcEEEEEeccc-cCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHh---CCeecccccHHHeEECCCCCEE
Confidence 999999999999997 59999986543 38899999999999999999999 8999999999999999999999
Q ss_pred EecccccccCCCCCcccccce--eeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCC
Q 006522 494 ISGFGLNRLLPGTSKVTKNET--IVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEN 571 (642)
Q Consensus 494 l~DfGla~~~~~~~~~~~~~~--~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~ 571 (642)
|+|||+++............. ............++..|+|||.+.....++.++||||+||++|||+||+.||.....
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~ 239 (335)
T PTZ00024 160 IADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENE 239 (335)
T ss_pred ECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence 999999986642211100000 000001111234677899999865545578999999999999999999999975432
Q ss_pred CcccHHHHHHHHHhccCC--Cc------------cccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 572 DGKGLESLVRKAFRERRP--LS------------EVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 572 ~~~~l~~~~~~~~~~~~~--~~------------~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
. ..+ ..+......... .. ....+...... ......+.+++.+||+.+|++||++.|++.
T Consensus 240 ~-~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 312 (335)
T PTZ00024 240 I-DQL-GRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIF--PNASDDAIDLLQSLLKLNPLERISAKEALK 312 (335)
T ss_pred H-HHH-HHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhC--cCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence 1 111 111111111000 00 00001110000 011245678999999999999999999985
No 348
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=2e-33 Score=289.79 Aligned_cols=243 Identities=21% Similarity=0.320 Sum_probs=188.5
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCc--cccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA--TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 424 (642)
...||+|+||.||+|....++ ..|++|.+..... ....+.+.+|++++++++|||++++++++...+..++||
T Consensus 26 ~~~lg~g~~g~v~~~~~~~~~-----~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 100 (313)
T cd06633 26 LHEIGHGSFGAVYFATNSHTN-----EVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVM 100 (313)
T ss_pred ceeeccCCCeEEEEEEECCCC-----cEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEE
Confidence 356999999999999987654 7899999865422 223357889999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCC
Q 006522 425 DFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLP 504 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 504 (642)
||+. |++.+++.... .++++..+..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++....
T Consensus 101 e~~~-~~l~~~l~~~~----~~l~~~~~~~~~~qi~~al~~LH~---~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~ 172 (313)
T cd06633 101 EYCL-GSASDLLEVHK----KPLQEVEIAAITHGALQGLAYLHS---HNMIHRDIKAGNILLTEPGQVKLADFGSASKSS 172 (313)
T ss_pred ecCC-CCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCChhhEEECCCCCEEEeecCCCcccC
Confidence 9996 58888876543 248999999999999999999999 899999999999999999999999999875422
Q ss_pred CCCcccccceeeecCCCcccccCCCcccCccccc--cCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHH
Q 006522 505 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARI--YGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRK 582 (642)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~ 582 (642)
.. ....|+..|+|||++. ....++.++|||||||++|||++|..||..... ......
T Consensus 173 ~~----------------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~-----~~~~~~ 231 (313)
T cd06633 173 PA----------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-----MSALYH 231 (313)
T ss_pred CC----------------CCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh-----HHHHHH
Confidence 11 1235677899999853 235678899999999999999999999875321 112222
Q ss_pred HHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 583 AFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 583 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
...... .....+.+ ...+.+++.+||+.+|++||++.++++
T Consensus 232 ~~~~~~--~~~~~~~~---------~~~l~~li~~~l~~~P~~Rp~~~~~l~ 272 (313)
T cd06633 232 IAQNDS--PTLQSNEW---------TDSFRGFVDYCLQKIPQERPASAELLR 272 (313)
T ss_pred HHhcCC--CCCCcccc---------CHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 222111 11111111 123456888999999999999999885
No 349
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=5.2e-34 Score=297.33 Aligned_cols=265 Identities=17% Similarity=0.239 Sum_probs=192.1
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC-ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeC-----Cce
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN-----DEK 420 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~-----~~~ 420 (642)
...||+|+||.||++.....+ +.||||.+.... .......+.+|+.++++++||||+++++++... ...
T Consensus 10 ~~~lg~G~~~~vy~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~ 84 (337)
T cd07858 10 IKPIGRGAYGIVCSAKNSETN-----EKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDV 84 (337)
T ss_pred EEEeccCCCeEEEEEEecCCC-----CeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcE
Confidence 457999999999999987654 899999987542 222235678899999999999999999988654 247
Q ss_pred EEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEeccccc
Q 006522 421 LLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLN 500 (642)
Q Consensus 421 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla 500 (642)
++||||+. ++|.+++.... .+++..+..++.|++.||.|||+ .+++||||||+||+++.++.+||+|||++
T Consensus 85 ~lv~e~~~-~~L~~~~~~~~-----~l~~~~~~~i~~qi~~aL~~LH~---~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~ 155 (337)
T cd07858 85 YIVYELMD-TDLHQIIRSSQ-----TLSDDHCQYFLYQLLRGLKYIHS---ANVLHRDLKPSNLLLNANCDLKICDFGLA 155 (337)
T ss_pred EEEEeCCC-CCHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEECcCccc
Confidence 99999996 68999887543 48999999999999999999999 89999999999999999999999999999
Q ss_pred ccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHH
Q 006522 501 RLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLV 580 (642)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~ 580 (642)
+....... ......++..|+|||.+.....++.++|||||||++|||++|+.||.+.... ......
T Consensus 156 ~~~~~~~~------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~--~~~~~~ 221 (337)
T cd07858 156 RTTSEKGD------------FMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYV--HQLKLI 221 (337)
T ss_pred cccCCCcc------------cccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChH--HHHHHH
Confidence 76543210 0112346778999998655456889999999999999999999999753211 111111
Q ss_pred HHHHhccCC--CccccChhhhhc-------------hhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH--HHhh
Q 006522 581 RKAFRERRP--LSEVIDPALVKE-------------IHAKRQVLATFHIALNCTELDPEFRPRMRTVSES--LDRV 639 (642)
Q Consensus 581 ~~~~~~~~~--~~~~~d~~l~~~-------------~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~--L~~l 639 (642)
........+ .....++..... ........++.+++.+||+.+|++|||+.|+++. ++.+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~ 297 (337)
T cd07858 222 TELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASL 297 (337)
T ss_pred HHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhh
Confidence 111100000 000000000000 0000122456789999999999999999999865 5443
No 350
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=2.6e-33 Score=279.60 Aligned_cols=245 Identities=24% Similarity=0.403 Sum_probs=195.0
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCcc-ccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEe
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT-WRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
...||+|++|.+|++.....+ +.|++|.+...... ...+.+.+|++++++++|||++++++++...+..++|||
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~-----~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (254)
T cd06627 5 GDLIGRGAFGVVYKGLNLETG-----DFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILE 79 (254)
T ss_pred eeEEcccCCeEEEEEEEcCCC-----cEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEe
Confidence 467999999999999887654 78999999765321 334789999999999999999999999999999999999
Q ss_pred eccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCC
Q 006522 426 FIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPG 505 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 505 (642)
|+++++|.+++.... .+++..+..++.|++.||.|||+ .+|+||||||+||+++.++.+||+|||++.....
T Consensus 80 ~~~~~~L~~~~~~~~-----~l~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~ 151 (254)
T cd06627 80 YAENGSLRQIIKKFG-----PFPESLVAVYVYQVLQGLAYLHE---QGVIHRDIKAANILTTKDGVVKLADFGVATKLND 151 (254)
T ss_pred cCCCCcHHHHHHhcc-----CCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCHHHEEECCCCCEEEeccccceecCC
Confidence 999999999997652 48999999999999999999999 8999999999999999999999999999986643
Q ss_pred CCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHh
Q 006522 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR 585 (642)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~ 585 (642)
.... .....++..|+|||.... ..++.++||||+|+++|+|++|+.||.... ...........
T Consensus 152 ~~~~------------~~~~~~~~~y~~pe~~~~-~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~----~~~~~~~~~~~ 214 (254)
T cd06627 152 VSKD------------DASVVGTPYWMAPEVIEM-SGASTASDIWSLGCTVIELLTGNPPYYDLN----PMAALFRIVQD 214 (254)
T ss_pred Cccc------------ccccccchhhcCHhhhcC-CCCCcchhHHHHHHHHHHHHhCCCCCCCcc----HHHHHHHHhcc
Confidence 3210 113356778999998544 558899999999999999999999987432 12222222212
Q ss_pred ccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 586 ERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 586 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
........+++ .+.+++.+||+.+|++||++.|++.
T Consensus 215 ~~~~~~~~~~~-------------~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 215 DHPPLPEGISP-------------ELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred CCCCCCCCCCH-------------HHHHHHHHHHhCChhhCcCHHHHhc
Confidence 22222222222 3446888899999999999999874
No 351
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=1.9e-33 Score=289.23 Aligned_cols=244 Identities=20% Similarity=0.344 Sum_probs=188.3
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCC--CccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG--DATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 424 (642)
...||+|++|.||+|....++ ..+++|.+... ......+++.+|++++++++|+|++++++++...+..++||
T Consensus 20 ~~~lg~g~~g~v~~~~~~~~~-----~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 94 (308)
T cd06634 20 LREIGHGSFGAVYFARDVRNS-----EVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 94 (308)
T ss_pred HHheeeCCCEEEEEEEEcCCC-----cEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence 457999999999999987654 78999988643 22223467889999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCC
Q 006522 425 DFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLP 504 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 504 (642)
||+. |++.+.+..... ++++..+..++.|++.||.|||+ .+++||||||+||+++.++.+||+|||++....
T Consensus 95 e~~~-~~l~~~~~~~~~----~l~~~~~~~~~~~l~~~l~~LH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~ 166 (308)
T cd06634 95 EYCL-GSASDLLEVHKK----PLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA 166 (308)
T ss_pred EccC-CCHHHHHHHcCC----CCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHhEEECCCCcEEECCcccceeec
Confidence 9996 688888764432 48999999999999999999999 899999999999999999999999999987543
Q ss_pred CCCcccccceeeecCCCcccccCCCcccCccccc--cCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHH
Q 006522 505 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARI--YGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRK 582 (642)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~ 582 (642)
.. ....++..|+|||.+. ....++.++|||||||++|||++|+.||..... ......
T Consensus 167 ~~----------------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-----~~~~~~ 225 (308)
T cd06634 167 PA----------------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-----MSALYH 225 (308)
T ss_pred Cc----------------ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccH-----HHHHHH
Confidence 21 1234677899999853 234578899999999999999999999864321 111111
Q ss_pred HHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 006522 583 AFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSES 635 (642)
Q Consensus 583 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~ 635 (642)
......+ ..... .....+.+++.+||+.+|++||++.++++.
T Consensus 226 ~~~~~~~--~~~~~---------~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~ 267 (308)
T cd06634 226 IAQNESP--ALQSG---------HWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 267 (308)
T ss_pred HhhcCCC--CcCcc---------cccHHHHHHHHHHhhCCcccCCCHHHHhhC
Confidence 1111111 10000 111234568889999999999999998864
No 352
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=2.6e-33 Score=281.76 Aligned_cols=249 Identities=19% Similarity=0.272 Sum_probs=188.0
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC----ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeC--Cc
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD----ATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN--DE 419 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~ 419 (642)
..+.||+|++|.||++.....+ +.|++|.+.... .....+.+.+|++++++++||||+++++++... ..
T Consensus 6 ~~~~lg~g~~g~v~~~~~~~~~-----~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~ 80 (264)
T cd06653 6 LGKLLGRGAFGEVYLCYDADTG-----RELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKK 80 (264)
T ss_pred eeeeEccCCCeEEEEEEEcCCC-----CEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCE
Confidence 3568999999999999987654 789999875321 122346789999999999999999999998765 35
Q ss_pred eEEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccc
Q 006522 420 KLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGL 499 (642)
Q Consensus 420 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGl 499 (642)
.++|+||+++++|.+++.... .+++.....++.|++.||.|||+ .+++||||||+||+++.++.++|+|||+
T Consensus 81 ~~~v~e~~~~~~L~~~~~~~~-----~l~~~~~~~~~~~i~~al~~LH~---~~i~H~dl~p~ni~i~~~~~~~l~dfg~ 152 (264)
T cd06653 81 LSIFVEYMPGGSIKDQLKAYG-----ALTENVTRRYTRQILQGVSYLHS---NMIVHRDIKGANILRDSAGNVKLGDFGA 152 (264)
T ss_pred EEEEEEeCCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEECcccc
Confidence 789999999999999987543 37889999999999999999999 8999999999999999999999999999
Q ss_pred cccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHH
Q 006522 500 NRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESL 579 (642)
Q Consensus 500 a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~ 579 (642)
++....... .........++..|+|||++.. ..++.++|||||||++|||++|+.||..... ....
T Consensus 153 ~~~~~~~~~---------~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~----~~~~ 218 (264)
T cd06653 153 SKRIQTICM---------SGTGIKSVTGTPYWMSPEVISG-EGYGRKADVWSVACTVVEMLTEKPPWAEYEA----MAAI 218 (264)
T ss_pred ccccccccc---------cCccccccCCcccccCHhhhcC-CCCCccccHHHHHHHHHHHHhCCCCCCccCH----HHHH
Confidence 986532110 0001113457788999998544 6788999999999999999999999964321 2222
Q ss_pred HHHHHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 580 VRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 580 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
........ ...+.+.+. ..+.+++..||+ +|..||+..++++
T Consensus 219 -~~~~~~~~--~~~~p~~~~---------~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 219 -FKIATQPT--KPMLPDGVS---------DACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred -HHHHcCCC--CCCCCcccC---------HHHHHHHHHHhc-CcccCccHHHHhc
Confidence 22221111 111121111 234557788999 5799999998764
No 353
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=3.2e-33 Score=279.58 Aligned_cols=247 Identities=22% Similarity=0.329 Sum_probs=195.6
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCc-cccHHHHHHHHHHHhcccCCCeeeEEEEEEeC--CceEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA-TWRFKDFESEVEAIARVQHPNIVRLKAFYYAN--DEKLLI 423 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~lv 423 (642)
.+.||+|++|.||+|....++ +.|++|.+..... ....+.+.+|++++++++||||+++++++... +..++|
T Consensus 5 ~~~i~~g~~~~v~~~~~~~~~-----~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 79 (260)
T cd06606 5 GELLGRGSFGSVYLALDKDTG-----ELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIF 79 (260)
T ss_pred eeEeeecCceEEEEEEECCCC-----cEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEE
Confidence 367999999999999988654 8999999876532 23347899999999999999999999999988 889999
Q ss_pred EeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccC
Q 006522 424 SDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLL 503 (642)
Q Consensus 424 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 503 (642)
+||+++++|.+++.... .+++..+..++.|++.||+|||+ .+++|+||+|+||+++.++.++|+|||.+...
T Consensus 80 ~e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~l~~~l~~lh~---~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~ 151 (260)
T cd06606 80 LEYVSGGSLSSLLKKFG-----KLPEPVIRKYTRQILEGLAYLHS---NGIVHRDIKGANILVDSDGVVKLADFGCAKRL 151 (260)
T ss_pred EEecCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEcCCCCEEEcccccEEec
Confidence 99999999999997653 48999999999999999999999 89999999999999999999999999998876
Q ss_pred CCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHH
Q 006522 504 PGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKA 583 (642)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~ 583 (642)
...... .......++..|+|||.... ...+.++||||||+++|+|++|+.||..... ........
T Consensus 152 ~~~~~~----------~~~~~~~~~~~y~~pE~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~----~~~~~~~~ 216 (260)
T cd06606 152 GDIETG----------EGTGSVRGTPYWMAPEVIRG-EEYGRAADIWSLGCTVIEMATGKPPWSELGN----PMAALYKI 216 (260)
T ss_pred cccccc----------ccccCCCCCccccCHhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCc----hHHHHHhc
Confidence 543210 00113456778999998544 5689999999999999999999999975431 11111111
Q ss_pred Hh--ccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 584 FR--ERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 584 ~~--~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
.. ....+...+ ...+.+++.+|++.+|++||++.|++.
T Consensus 217 ~~~~~~~~~~~~~-------------~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 217 GSSGEPPEIPEHL-------------SEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred cccCCCcCCCccc-------------CHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 11 111111112 134566888999999999999999975
No 354
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=1.2e-33 Score=291.20 Aligned_cols=270 Identities=19% Similarity=0.238 Sum_probs=191.0
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCcc-ccHHHHHHHHHHHhcccCCCeeeEEEEEEeCC-------
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT-WRFKDFESEVEAIARVQHPNIVRLKAFYYAND------- 418 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~------- 418 (642)
...||+|++|.||+|.....+ +.+++|++...... .....+.+|++++++++||||+++++++....
T Consensus 13 ~~~lg~g~~~~v~~~~~~~~~-----~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 87 (311)
T cd07866 13 LGKLGEGTFGEVYKARQIKTG-----RVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRKR 87 (311)
T ss_pred EEEeccCCCEEEEEEEECCCC-----cEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccccccccC
Confidence 467999999999999987665 78999988654221 12256789999999999999999999876543
Q ss_pred -ceEEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecc
Q 006522 419 -EKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGF 497 (642)
Q Consensus 419 -~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~Df 497 (642)
..++|+||+.+ ++.+.+.... ..+++..+..++.|+++||+|||+ .+|+||||||+||++++++.+||+||
T Consensus 88 ~~~~lv~~~~~~-~l~~~~~~~~----~~~~~~~~~~i~~~l~~al~~lH~---~~i~H~dl~p~nil~~~~~~~~l~df 159 (311)
T cd07866 88 GSVYMVTPYMDH-DLSGLLENPS----VKLTESQIKCYMLQLLEGINYLHE---NHILHRDIKAANILIDNQGILKIADF 159 (311)
T ss_pred ceEEEEEecCCc-CHHHHHhccc----cCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEECcC
Confidence 46999999975 7887776533 248999999999999999999999 89999999999999999999999999
Q ss_pred cccccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHH
Q 006522 498 GLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLE 577 (642)
Q Consensus 498 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~ 577 (642)
|+++............. ...........+++.|+|||.+.....++.++|||||||++|||++|+.||.+.... ....
T Consensus 160 g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~-~~~~ 237 (311)
T cd07866 160 GLARPYDGPPPNPKGGG-GGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDI-DQLH 237 (311)
T ss_pred ccchhccCCCcccccCC-cccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHH-HHHH
Confidence 99986543321111000 001111223467888999998655456899999999999999999999999753221 1111
Q ss_pred HHHHHHHhccCC--------Cc--------cccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 578 SLVRKAFRERRP--------LS--------EVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 578 ~~~~~~~~~~~~--------~~--------~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
.... ......+ +. ....+.+.... ......+.+++.+|++.||++|||+.|+++
T Consensus 238 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 238 LIFK-LCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERF--GKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred HHHH-HhCCCChhhchhhhhcccccccccCCCCCccHHHHc--ccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 1111 1100000 00 00111111000 011245778999999999999999999875
No 355
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9e-35 Score=275.88 Aligned_cols=238 Identities=21% Similarity=0.299 Sum_probs=194.5
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC--ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEE
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLI 423 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 423 (642)
.-.+||+|.||.|-.++.+..+ +.+|+|++++.- ....+..-+.|-++|+..+||.+..+...|+..+..++|
T Consensus 172 fLKvLGkGTFGKVIL~rEKat~-----k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFV 246 (516)
T KOG0690|consen 172 FLKVLGKGTFGKVILCREKATG-----KLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFV 246 (516)
T ss_pred HHHHhcCCccceEEEEeecccC-----ceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEE
Confidence 3578999999999999988776 899999998762 222334557899999999999999999999999999999
Q ss_pred EeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccC
Q 006522 424 SDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLL 503 (642)
Q Consensus 424 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 503 (642)
|||+.||.|+-+|...+ .+++.....+-.+|..||.|||+ ++||.||||.+|.|+|.+|++||+|||+++.-
T Consensus 247 MeyanGGeLf~HLsrer-----~FsE~RtRFYGaEIvsAL~YLHs---~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~ 318 (516)
T KOG0690|consen 247 MEYANGGELFFHLSRER-----VFSEDRTRFYGAEIVSALGYLHS---RNIVYRDLKLENLLLDKDGHIKITDFGLCKEE 318 (516)
T ss_pred EEEccCceEeeehhhhh-----cccchhhhhhhHHHHHHhhhhhh---CCeeeeechhhhheeccCCceEeeecccchhc
Confidence 99999999998887654 38888888999999999999999 89999999999999999999999999999863
Q ss_pred CCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHH
Q 006522 504 PGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKA 583 (642)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~ 583 (642)
-.. +......+|||.|.|||++ ....|+.+.|.|.+||++|||++|+.||...+. ..+..-+
T Consensus 319 I~~------------g~t~kTFCGTPEYLAPEVl-eDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh-----~kLFeLI 380 (516)
T KOG0690|consen 319 IKY------------GDTTKTFCGTPEYLAPEVL-EDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDH-----EKLFELI 380 (516)
T ss_pred ccc------------cceeccccCChhhcCchhh-ccccccceeehhhhhHHHHHHHhccCcccccch-----hHHHHHH
Confidence 222 1122367999999999995 458899999999999999999999999985332 2344444
Q ss_pred HhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCC
Q 006522 584 FRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRP 627 (642)
Q Consensus 584 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP 627 (642)
..+...++..++|+... +.--.+..||.+|.
T Consensus 381 l~ed~kFPr~ls~eAkt-------------LLsGLL~kdP~kRL 411 (516)
T KOG0690|consen 381 LMEDLKFPRTLSPEAKT-------------LLSGLLKKDPKKRL 411 (516)
T ss_pred HhhhccCCccCCHHHHH-------------HHHHHhhcChHhhc
Confidence 44444456666666544 33347889999994
No 356
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=2.2e-33 Score=285.16 Aligned_cols=258 Identities=19% Similarity=0.279 Sum_probs=193.4
Q ss_pred cccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCcc-ccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT-WRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 348 ~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
..||+|++|.||++....++ +.+++|.+...... ...+.+.+|++++++++|+||+++++++...+..++|+||
T Consensus 5 ~~i~~g~~~~v~~~~~~~~~-----~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 79 (283)
T cd05118 5 GKIGEGTYGVVYKARDKLTG-----EIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEF 79 (283)
T ss_pred eeeecCCCceEEEEEcCCCC-----cEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEec
Confidence 56899999999999987654 88999998765322 2346788999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCC
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 506 (642)
+++ +|.+++.... ..+++..+..++.|++.||+|||+ .+|+|+||||+||++++++.+||+|||.+......
T Consensus 80 ~~~-~l~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~ 151 (283)
T cd05118 80 MDT-DLYKLIKDRQ----RGLPESLIKSYLYQLLQGLAFCHS---HGILHRDLKPENLLINTEGVLKLADFGLARSFGSP 151 (283)
T ss_pred cCC-CHHHHHHhhc----ccCCHHHHHHHHHHHHHHHHHHHH---CCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCC
Confidence 975 8998887643 248999999999999999999999 89999999999999999999999999998766433
Q ss_pred CcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHhc
Q 006522 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE 586 (642)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~~ 586 (642)
.. ......++..|+|||.......++.++||||+|+++|+|+||+.||...... ..+..... ....
T Consensus 152 ~~------------~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~-~~~~~~~~-~~~~ 217 (283)
T cd05118 152 VR------------PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEI-DQLFKIFR-TLGT 217 (283)
T ss_pred cc------------cccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHH-HcCC
Confidence 10 0012346677999998655447899999999999999999999999653321 11111111 0000
Q ss_pred cC----------------CCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 587 RR----------------PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 587 ~~----------------~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
.. ......+..... .......++.+++.+||+.||.+||++.+++.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 218 PDPEVWPKFTSLARNYKFSFPKKAGMPLPK--LFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred CchHhcccchhhhhhhhhhhccccccCHHH--hhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 00 000000000000 00122356778999999999999999999975
No 357
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=5.9e-33 Score=276.40 Aligned_cols=246 Identities=23% Similarity=0.333 Sum_probs=194.5
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
...||+|++|.||++....++ +.+++|++..... ...+.+.+|++++++++||||+++++++...+..++++||
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~-----~~~~~k~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~ 78 (253)
T cd05122 5 LEKIGKGGFGEVYKARHKRTG-----KEVAIKVIKLESK-EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEF 78 (253)
T ss_pred eeeeccCCceEEEEEEECCCC-----cEEEEEEecccch-hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEec
Confidence 357999999999999987654 7899999976543 2347899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCC
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 506 (642)
+++++|.+++.... ..+++..+..++.|++.||+|||+ .+++||||+|+||++++++.++|+|||.+......
T Consensus 79 ~~~~~L~~~~~~~~----~~~~~~~~~~i~~~i~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 151 (253)
T cd05122 79 CSGGSLKDLLKSTN----QTLTESQIAYVCKELLKGLEYLHS---NGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDT 151 (253)
T ss_pred CCCCcHHHHHhhcC----CCCCHHHHHHHHHHHHHHHHHhhc---CCEecCCCCHHHEEEccCCeEEEeecccccccccc
Confidence 99999999997653 248999999999999999999999 89999999999999999999999999998765433
Q ss_pred CcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHhc
Q 006522 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE 586 (642)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~~ 586 (642)
.. .....++..|+|||.... ..++.++||||||+++|+|++|+.||..... ..........
T Consensus 152 ~~-------------~~~~~~~~~~~~PE~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~~ 212 (253)
T cd05122 152 KA-------------RNTMVGTPYWMAPEVING-KPYDYKADIWSLGITAIELAEGKPPYSELPP-----MKALFKIATN 212 (253)
T ss_pred cc-------------ccceecCCcccCHHHHcC-CCCCccccHHHHHHHHHHHHhCCCCCCCCch-----HHHHHHHHhc
Confidence 11 113456778999998544 5688999999999999999999999874321 1111111111
Q ss_pred cCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 587 RRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 587 ~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
.. ....++.. ....+.+++.+||+.||++|||+.|+++
T Consensus 213 ~~--~~~~~~~~--------~~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 213 GP--PGLRNPEK--------WSDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred CC--CCcCcccc--------cCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 11 11111100 0134667888999999999999999875
No 358
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=2.9e-33 Score=292.17 Aligned_cols=256 Identities=20% Similarity=0.273 Sum_probs=187.0
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCc-cccHHHHHHHHHHHhcccCCCeeeEEEEEEeCC------c
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA-TWRFKDFESEVEAIARVQHPNIVRLKAFYYAND------E 419 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~------~ 419 (642)
...||+|+||.||+|.....+ +.||||++..... ......+.+|+.++++++||||+++++++.... .
T Consensus 20 ~~~ig~g~~g~v~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 94 (342)
T cd07879 20 LKQVGSGAYGSVCSAIDKRTG-----EKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQD 94 (342)
T ss_pred EEEeeecCCeEEEEEEeCCCC-----cEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCce
Confidence 478999999999999976554 7899999875422 222356889999999999999999999987543 4
Q ss_pred eEEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccc
Q 006522 420 KLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGL 499 (642)
Q Consensus 420 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGl 499 (642)
.++|+||+.. +|.+++. ..+++..+..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||+
T Consensus 95 ~~lv~e~~~~-~l~~~~~-------~~~~~~~~~~~~~qi~~aL~~LH~---~~i~H~dlkp~NIll~~~~~~kL~dfg~ 163 (342)
T cd07879 95 FYLVMPYMQT-DLQKIMG-------HPLSEDKVQYLVYQMLCGLKYIHS---AGIIHRDLKPGNLAVNEDCELKILDFGL 163 (342)
T ss_pred EEEEeccccc-CHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEeeCCC
Confidence 5899999975 7777652 138899999999999999999999 8999999999999999999999999999
Q ss_pred cccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHH
Q 006522 500 NRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESL 579 (642)
Q Consensus 500 a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~ 579 (642)
++...... ....++..|+|||.+.....++.++|||||||++|||++|+.||..... ...
T Consensus 164 ~~~~~~~~---------------~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~-----~~~ 223 (342)
T cd07879 164 ARHADAEM---------------TGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY-----LDQ 223 (342)
T ss_pred CcCCCCCC---------------CCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCH-----HHH
Confidence 87543211 1234567799999865545688999999999999999999999975321 111
Q ss_pred HHHHHhc-cCCCccc-------------------cChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH--HH
Q 006522 580 VRKAFRE-RRPLSEV-------------------IDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSES--LD 637 (642)
Q Consensus 580 ~~~~~~~-~~~~~~~-------------------~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~--L~ 637 (642)
+...... +.+..+. ....+.... ......+.+++.+||+.||++||++.|++.. ++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~ 301 (342)
T cd07879 224 LTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLF--PKASPQAVDLLEKMLELDVDKRLTATEALEHPYFD 301 (342)
T ss_pred HHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHh--cCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchh
Confidence 1111110 0000000 000000000 0011346789999999999999999999843 55
Q ss_pred hhh
Q 006522 638 RVK 640 (642)
Q Consensus 638 ~l~ 640 (642)
.++
T Consensus 302 ~~~ 304 (342)
T cd07879 302 SFR 304 (342)
T ss_pred hcc
Confidence 443
No 359
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=2.9e-33 Score=292.28 Aligned_cols=253 Identities=19% Similarity=0.245 Sum_probs=186.7
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCc-cccHHHHHHHHHHHhcccCCCeeeEEEEEEeCC------c
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA-TWRFKDFESEVEAIARVQHPNIVRLKAFYYAND------E 419 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~------~ 419 (642)
...||+|+||.||++.....+ ..||||++..... ....+.+.+|++++++++||||+++++++.... .
T Consensus 20 ~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 94 (343)
T cd07880 20 LKQVGSGAYGTVCSALDRRTG-----AKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHD 94 (343)
T ss_pred EEEeeecCCeEEEEEEECCCC-----cEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccce
Confidence 467999999999999977654 7899999865322 222356889999999999999999999987653 3
Q ss_pred eEEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccc
Q 006522 420 KLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGL 499 (642)
Q Consensus 420 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGl 499 (642)
.++||||+ +++|.+++... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+|++|||+
T Consensus 95 ~~lv~e~~-~~~l~~~~~~~------~l~~~~~~~i~~qi~~al~~LH~---~gi~H~dlkp~Nill~~~~~~kl~dfg~ 164 (343)
T cd07880 95 FYLVMPFM-GTDLGKLMKHE------KLSEDRIQFLVYQMLKGLKYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGL 164 (343)
T ss_pred EEEEEecC-CCCHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeeccc
Confidence 58999999 77999888642 38999999999999999999999 8999999999999999999999999999
Q ss_pred cccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHH
Q 006522 500 NRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESL 579 (642)
Q Consensus 500 a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~ 579 (642)
++...... ....+++.|+|||.+.....++.++||||+||++|++++|+.||...... ..
T Consensus 165 ~~~~~~~~---------------~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~-----~~ 224 (343)
T cd07880 165 ARQTDSEM---------------TGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHL-----DQ 224 (343)
T ss_pred ccccccCc---------------cccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-----HH
Confidence 87543211 12345778999998654356889999999999999999999999753221 11
Q ss_pred HHHHHhccCCCccccChhhh--------h--------chh--HHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 580 VRKAFRERRPLSEVIDPALV--------K--------EIH--AKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 580 ~~~~~~~~~~~~~~~d~~l~--------~--------~~~--~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
..............+...+. . ... .......+.+++.+|++.||++|||+.++++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~ 297 (343)
T cd07880 225 LMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALA 297 (343)
T ss_pred HHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 11111110000000000000 0 000 0011224678999999999999999999883
No 360
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=3.5e-33 Score=290.47 Aligned_cols=266 Identities=20% Similarity=0.231 Sum_probs=187.6
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC-ccccHHHHHHHHHHHhcc-cCCCeeeEEEEEEeC----Cce
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARV-QHPNIVRLKAFYYAN----DEK 420 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~----~~~ 420 (642)
...||+|+||.||++...... ....||+|++.... .....+.+.+|++++.++ +||||+++++++... ...
T Consensus 5 ~~~lg~G~~g~vy~~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 81 (332)
T cd07857 5 IKELGQGAYGIVCSARNAETS---EEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNEL 81 (332)
T ss_pred EEEccccCCeEEEEEEeCCCC---cCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcE
Confidence 467999999999999987651 01789999987532 222236788999999999 599999999976543 357
Q ss_pred EEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEeccccc
Q 006522 421 LLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLN 500 (642)
Q Consensus 421 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla 500 (642)
++++||+. ++|.+++.... .+++..+..++.||+.||+|||+ .+|+||||||+||++++++.+||+|||++
T Consensus 82 ~~~~e~~~-~~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~---~givH~dlkp~Nili~~~~~~kl~Dfg~a 152 (332)
T cd07857 82 YLYEELME-ADLHQIIRSGQ-----PLTDAHFQSFIYQILCGLKYIHS---ANVLHRDLKPGNLLVNADCELKICDFGLA 152 (332)
T ss_pred EEEEeccc-CCHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHeEEcCCCCEEeCcCCCc
Confidence 88899886 59999986543 48999999999999999999999 89999999999999999999999999999
Q ss_pred ccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHH
Q 006522 501 RLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLV 580 (642)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~ 580 (642)
+........ .........||..|+|||+......++.++||||+||++|+|++|+.||...... ......
T Consensus 153 ~~~~~~~~~--------~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~--~~~~~~ 222 (332)
T cd07857 153 RGFSENPGE--------NAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYV--DQLNQI 222 (332)
T ss_pred eeccccccc--------ccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHH--HHHHHH
Confidence 865432111 0001113467889999998555456899999999999999999999998753211 011110
Q ss_pred HHHHhccCC--CccccChhhhh-----------chhH--HHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 581 RKAFRERRP--LSEVIDPALVK-----------EIHA--KRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 581 ~~~~~~~~~--~~~~~d~~l~~-----------~~~~--~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
......... .....++.... .... ......+.+++.+|++.||++|||+.|++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~ 291 (332)
T cd07857 223 LQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALE 291 (332)
T ss_pred HHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 000000000 00000000000 0000 001235678999999999999999999874
No 361
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=2.1e-33 Score=293.57 Aligned_cols=257 Identities=19% Similarity=0.256 Sum_probs=185.7
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC-ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeC------Cc
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN------DE 419 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~------~~ 419 (642)
...||+|+||.||++....++ +.||+|++.... .....+.+.+|+.++++++||||+++++++... ..
T Consensus 22 ~~~lg~G~~g~v~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (345)
T cd07877 22 LSPVGSGAYGSVCAAFDTKTG-----LRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND 96 (345)
T ss_pred EEEeeecCCeEEEEEEEcCCC-----eEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeeccccccccc
Confidence 357999999999999987654 899999987542 222236788999999999999999999988643 34
Q ss_pred eEEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccc
Q 006522 420 KLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGL 499 (642)
Q Consensus 420 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGl 499 (642)
.+++++++ +++|.+++... .+++..+..++.|+++||+|||+ .+|+||||||+||++++++.+||+|||+
T Consensus 97 ~~lv~~~~-~~~L~~~~~~~------~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~~~~~kl~dfg~ 166 (345)
T cd07877 97 VYLVTHLM-GADLNNIVKCQ------KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL 166 (345)
T ss_pred EEEEehhc-ccCHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChHHEEEcCCCCEEEecccc
Confidence 67888876 78999888643 38999999999999999999999 8999999999999999999999999999
Q ss_pred cccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHH
Q 006522 500 NRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESL 579 (642)
Q Consensus 500 a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~ 579 (642)
++..... .....++..|+|||.......++.++|||||||++|||++|+.||..... ...+...
T Consensus 167 ~~~~~~~---------------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~-~~~~~~~ 230 (345)
T cd07877 167 ARHTDDE---------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH-IDQLKLI 230 (345)
T ss_pred ccccccc---------------ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHH
Confidence 8754221 11235677899999855435678999999999999999999999964322 1111111
Q ss_pred HHHHHhccCCCccccChhhhhch-hH-------------HHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 580 VRKAFRERRPLSEVIDPALVKEI-HA-------------KRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 580 ~~~~~~~~~~~~~~~d~~l~~~~-~~-------------~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
.+............+........ .. ......+.+++.+|++.||.+||++.++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 299 (345)
T cd07877 231 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 299 (345)
T ss_pred HHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhc
Confidence 11110000000000000000000 00 001234678999999999999999999875
No 362
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=4.7e-33 Score=288.73 Aligned_cols=257 Identities=19% Similarity=0.268 Sum_probs=187.4
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC-ccccHHHHHHHHHHHhcccCCCeeeEEEEEEe-CCceEEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYA-NDEKLLIS 424 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~-~~~~~lv~ 424 (642)
...||+|+||.||++.....+ +.||+|++.... .....+.+.+|++++++++||||++++++|.. ....++|+
T Consensus 15 ~~~ig~g~~g~v~~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~lv~ 89 (328)
T cd07856 15 LQPVGMGAFGLVCSARDQLTG-----QNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYFVT 89 (328)
T ss_pred EEeecccCCeEEEEEEECCCC-----CEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEEEe
Confidence 468999999999999987665 899999886532 22233678899999999999999999999876 45789999
Q ss_pred eeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCC
Q 006522 425 DFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLP 504 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 504 (642)
||+ +++|.++++.. .+++.....++.|+++||+|||+ .+|+||||||+||++++++.+||+|||+++...
T Consensus 90 e~~-~~~L~~~~~~~------~~~~~~~~~~~~ql~~aL~~LH~---~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~ 159 (328)
T cd07856 90 ELL-GTDLHRLLTSR------PLEKQFIQYFLYQILRGLKYVHS---AGVVHRDLKPSNILINENCDLKICDFGLARIQD 159 (328)
T ss_pred ehh-ccCHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEeECCCCCEEeCccccccccC
Confidence 998 56999888642 37888889999999999999999 899999999999999999999999999987532
Q ss_pred CCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHH
Q 006522 505 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAF 584 (642)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~ 584 (642)
.. .....++..|+|||.+..+..++.++|||||||++|||+||+.||...... .....+....
T Consensus 160 ~~---------------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~--~~~~~~~~~~ 222 (328)
T cd07856 160 PQ---------------MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHV--NQFSIITDLL 222 (328)
T ss_pred CC---------------cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHh
Confidence 21 012345677999998655467899999999999999999999999753221 1111111111
Q ss_pred hccCC--CccccChh-------hhh--chhHH----HHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 006522 585 RERRP--LSEVIDPA-------LVK--EIHAK----RQVLATFHIALNCTELDPEFRPRMRTVSES 635 (642)
Q Consensus 585 ~~~~~--~~~~~d~~-------l~~--~~~~~----~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~ 635 (642)
..... .....+.. +.. ..... .....+.+++.+|++.+|++||++.+++..
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 223 GTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred CCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000 00000000 000 00000 012456778999999999999999998753
No 363
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=1.2e-32 Score=280.31 Aligned_cols=259 Identities=19% Similarity=0.262 Sum_probs=189.2
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCcc-ccHHHHHHHHHHHhcc---cCCCeeeEEEEEEeCCc---
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT-WRFKDFESEVEAIARV---QHPNIVRLKAFYYANDE--- 419 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l---~H~nIv~l~~~~~~~~~--- 419 (642)
.+.||+|+||.||++.....+ +.+|+|+++..... .....+.+|+.++.++ +||||+++++++...+.
T Consensus 4 ~~~l~~g~~~~v~~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~ 78 (287)
T cd07838 4 LAEIGEGAYGTVYKARDLNTG-----RFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRE 78 (287)
T ss_pred EEEecccCceEEEEEEECCCC-----CEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCC
Confidence 467899999999999987643 79999999754222 2225567788877766 59999999999998776
Q ss_pred --eEEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecc
Q 006522 420 --KLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGF 497 (642)
Q Consensus 420 --~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~Df 497 (642)
.+++|||+.+ +|.+++..... ..+++..+..++.|+++||+|||+ .+++|+||||+||++++++.+||+||
T Consensus 79 ~~~~l~~e~~~~-~l~~~l~~~~~---~~l~~~~~~~~~~~i~~al~~LH~---~~i~h~~l~~~nili~~~~~~~l~df 151 (287)
T cd07838 79 LKLTLVFEHVDQ-DLATYLSKCPK---PGLPPETIKDLMRQLLRGVDFLHS---HRIVHRDLKPQNILVTSDGQVKIADF 151 (287)
T ss_pred ceeEEEehhccc-CHHHHHHHccC---CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCChhhEEEccCCCEEEecc
Confidence 8999999975 89998875432 248999999999999999999999 89999999999999999999999999
Q ss_pred cccccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHH
Q 006522 498 GLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLE 577 (642)
Q Consensus 498 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~ 577 (642)
|++........ .....++..|+|||++.. ..++.++|||||||++|||+||+.||..... ...+.
T Consensus 152 g~~~~~~~~~~-------------~~~~~~~~~~~~PE~~~~-~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~-~~~~~ 216 (287)
T cd07838 152 GLARIYSFEMA-------------LTSVVVTLWYRAPEVLLQ-SSYATPVDMWSVGCIFAELFRRRPLFRGTSE-ADQLD 216 (287)
T ss_pred CcceeccCCcc-------------cccccccccccChHHhcc-CCCCCcchhhhHHHHHHHHHhCCCcccCCCh-HHHHH
Confidence 99876533211 012245678999998544 6789999999999999999999999875322 11122
Q ss_pred HHHHHHHhc---cCCCc---------cccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 578 SLVRKAFRE---RRPLS---------EVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 578 ~~~~~~~~~---~~~~~---------~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
.+....... ..+.. ......... ....-...+.+++.+||+.||++||++.|++.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 217 KIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKS--FVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred HHHHHcCCCChHhcCCCcccchhhcccccccchhh--hhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 222111000 00000 000000000 00112245678999999999999999999874
No 364
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=3.7e-33 Score=291.45 Aligned_cols=258 Identities=20% Similarity=0.304 Sum_probs=186.0
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeC---------
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN--------- 417 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--------- 417 (642)
...||.|+||.||+|.....+ +.||+|.+..... ...+.+.+|++++++++||||+++++++...
T Consensus 10 ~~~Lg~g~~g~vy~~~~~~~~-----~~v~iK~i~~~~~-~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (342)
T cd07854 10 LRPLGCGSNGLVFSAVDSDCD-----KRVAVKKIVLTDP-QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG 83 (342)
T ss_pred EEEecCCCCEEEEEEEECCCC-----cEEEEEEEecCCC-chHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence 467999999999999987765 7999999866433 3347788999999999999999999876654
Q ss_pred -----CceEEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeC-CCCC
Q 006522 418 -----DEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLD-DELH 491 (642)
Q Consensus 418 -----~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~-~~~~ 491 (642)
...++||||++ ++|.+++... .+++.....++.||+.||+|||+ .+|+||||||+||+++ +++.
T Consensus 84 ~~~~~~~~~lv~e~~~-~~L~~~~~~~------~l~~~~~~~~~~qi~~aL~~LH~---~givH~dikp~Nili~~~~~~ 153 (342)
T cd07854 84 SLTELNSVYIVQEYME-TDLANVLEQG------PLSEEHARLFMYQLLRGLKYIHS---ANVLHRDLKPANVFINTEDLV 153 (342)
T ss_pred cccccceEEEEeeccc-ccHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEcCCCce
Confidence 35789999997 5999888642 38899999999999999999999 8999999999999997 4567
Q ss_pred eEEecccccccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCC
Q 006522 492 PCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEN 571 (642)
Q Consensus 492 ~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~ 571 (642)
+|++|||+++......... .......++..|+|||.+..+..++.++|||||||++|||++|+.||.....
T Consensus 154 ~kl~dfg~~~~~~~~~~~~---------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~ 224 (342)
T cd07854 154 LKIGDFGLARIVDPHYSHK---------GYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHE 224 (342)
T ss_pred EEECCcccceecCCccccc---------cccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 8999999987653221100 0011235677899999855556688999999999999999999999975322
Q ss_pred CcccHHHHHHHHHhccC-CCc-------cccChhhh------hc-hh--HHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 572 DGKGLESLVRKAFRERR-PLS-------EVIDPALV------KE-IH--AKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 572 ~~~~l~~~~~~~~~~~~-~~~-------~~~d~~l~------~~-~~--~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
. . .........+ ... ..+..... .. .. ......++.+++.+||+.||++|||+.|+++
T Consensus 225 ~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 299 (342)
T cd07854 225 L----E-QMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM 299 (342)
T ss_pred H----H-HHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence 1 1 1111110000 000 00000000 00 00 0011235668999999999999999999974
No 365
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=5.6e-33 Score=276.73 Aligned_cols=238 Identities=22% Similarity=0.337 Sum_probs=190.4
Q ss_pred cCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCc--cccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEeec
Q 006522 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA--TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFI 427 (642)
Q Consensus 350 lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~ 427 (642)
||+|++|.||++.....+ +.+++|.+..... ......+..|++++++++||||+++++.+..++..++||||+
T Consensus 1 lg~G~~~~v~~~~~~~~~-----~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 75 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTG-----KLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYA 75 (250)
T ss_pred CCCCCceEEEEEEECCCC-----cEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecC
Confidence 689999999999987644 7899999876532 223467899999999999999999999999999999999999
Q ss_pred cCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCCC
Q 006522 428 RNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTS 507 (642)
Q Consensus 428 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 507 (642)
++++|.+++.... .+++.....++.|++.||.|||+ .+++|+||||+||+++.++.++|+|||++.......
T Consensus 76 ~~~~L~~~l~~~~-----~l~~~~~~~~~~qi~~~l~~lh~---~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~ 147 (250)
T cd05123 76 PGGELFSHLSKEG-----RFSEERARFYAAEIVLALEYLHS---LGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG 147 (250)
T ss_pred CCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcceEEEcCCCcEEEeecCcceecccCC
Confidence 9999999997653 38999999999999999999999 899999999999999999999999999987654321
Q ss_pred cccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHhcc
Q 006522 508 KVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRER 587 (642)
Q Consensus 508 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~~~ 587 (642)
. ......++..|+|||.... ...+.++|+||||+++||+++|+.||..... ....+......
T Consensus 148 ~------------~~~~~~~~~~~~~Pe~~~~-~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~-----~~~~~~~~~~~ 209 (250)
T cd05123 148 S------------RTNTFCGTPEYLAPEVLLG-KGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR-----KEIYEKILKDP 209 (250)
T ss_pred C------------cccCCcCCccccChHHhCC-CCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-----HHHHHHHhcCC
Confidence 0 0113456778999998543 6678999999999999999999999964322 23333333333
Q ss_pred CCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHH
Q 006522 588 RPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRT 631 (642)
Q Consensus 588 ~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~e 631 (642)
.++...++. .+.+++.+||..||++||++.+
T Consensus 210 ~~~~~~~~~-------------~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 210 LRFPEFLSP-------------EARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred CCCCCCCCH-------------HHHHHHHHHhcCCHhhCCCccc
Confidence 333333322 3456888899999999999954
No 366
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=2.3e-33 Score=293.09 Aligned_cols=253 Identities=18% Similarity=0.257 Sum_probs=189.2
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC-ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCc------
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDE------ 419 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~------ 419 (642)
...||+|++|.||+|....++ ..||||++.... .....+.+.+|+.++++++||||+++++++...+.
T Consensus 20 ~~~ig~g~~g~vy~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 94 (343)
T cd07851 20 LSPVGSGAYGQVCSAFDTKTG-----RKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQD 94 (343)
T ss_pred EEEeccCCceEEEEEEECCCC-----cEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccccc
Confidence 467999999999999997765 789999986532 22233667889999999999999999998876654
Q ss_pred eEEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccc
Q 006522 420 KLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGL 499 (642)
Q Consensus 420 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGl 499 (642)
.++|+||+ +++|.+++... .+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+
T Consensus 95 ~~lv~e~~-~~~L~~~~~~~------~l~~~~~~~~~~ql~~aL~~LH~---~gi~H~dlkp~Nill~~~~~~kL~dfg~ 164 (343)
T cd07851 95 VYLVTHLM-GADLNNIVKCQ------KLSDDHIQFLVYQILRGLKYIHS---AGIIHRDLKPSNIAVNEDCELKILDFGL 164 (343)
T ss_pred EEEEEecC-CCCHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCCEEEccccc
Confidence 89999998 66999998752 38999999999999999999999 8999999999999999999999999999
Q ss_pred cccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHH
Q 006522 500 NRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESL 579 (642)
Q Consensus 500 a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~ 579 (642)
+...... .....++..|+|||.......++.++||||+||++|||+||+.||..... ...
T Consensus 165 ~~~~~~~---------------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~-----~~~ 224 (343)
T cd07851 165 ARHTDDE---------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDH-----IDQ 224 (343)
T ss_pred ccccccc---------------ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh-----HHH
Confidence 8765322 11235677899999855434678999999999999999999999975322 111
Q ss_pred HHHHHhccCCCccccChhhhh-----c-----------hhH--HHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 580 VRKAFRERRPLSEVIDPALVK-----E-----------IHA--KRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 580 ~~~~~~~~~~~~~~~d~~l~~-----~-----------~~~--~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
+...........+.+...+.. . ... .....++.+++.+|++.||++|||+.|+++
T Consensus 225 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~ 297 (343)
T cd07851 225 LKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA 297 (343)
T ss_pred HHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence 111111110000000000000 0 000 011346778999999999999999999875
No 367
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=2.7e-33 Score=291.27 Aligned_cols=265 Identities=18% Similarity=0.257 Sum_probs=196.2
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCc-cccHHHHHHHHHHHhcccCCCeeeEEEEEEeCC-----ce
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA-TWRFKDFESEVEAIARVQHPNIVRLKAFYYAND-----EK 420 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~-----~~ 420 (642)
...||+|++|.||+|.....+ +.|++|++..... ....+.+.+|+.++++++||||+++++++...+ ..
T Consensus 5 ~~~ig~g~~~~v~~~~~~~~~-----~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~ 79 (330)
T cd07834 5 LKPIGSGAYGVVCSAVDKRTG-----RKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDV 79 (330)
T ss_pred eeeecCCCCeEEEEEEeCCCC-----cEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccce
Confidence 467999999999999987654 7899999876432 333478999999999999999999999998775 78
Q ss_pred EEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEeccccc
Q 006522 421 LLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLN 500 (642)
Q Consensus 421 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla 500 (642)
|+||||+++ +|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.++|+|||++
T Consensus 80 ~lv~e~~~~-~l~~~l~~~~-----~l~~~~~~~i~~~l~~~l~~LH~---~gi~H~dlkp~nili~~~~~~~L~dfg~~ 150 (330)
T cd07834 80 YIVTELMET-DLHKVIKSPQ-----PLTDDHIQYFLYQILRGLKYLHS---ANVIHRDLKPSNILVNSNCDLKICDFGLA 150 (330)
T ss_pred EEEecchhh-hHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEcccCce
Confidence 999999984 8999987543 48999999999999999999999 89999999999999999999999999999
Q ss_pred ccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHH
Q 006522 501 RLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLV 580 (642)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~ 580 (642)
......... ........++..|+|||.+.....++.++||||||+++|+|+||+.||..... ....
T Consensus 151 ~~~~~~~~~---------~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~-----~~~~ 216 (330)
T cd07834 151 RGVDPDEDE---------KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDY-----IDQL 216 (330)
T ss_pred Eeecccccc---------cccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCH-----HHHH
Confidence 876443210 00111335677899999866544789999999999999999999999975432 1111
Q ss_pred HHHHhccC-CCccc----cChhhhhchh-------------HHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH--HHhh
Q 006522 581 RKAFRERR-PLSEV----IDPALVKEIH-------------AKRQVLATFHIALNCTELDPEFRPRMRTVSES--LDRV 639 (642)
Q Consensus 581 ~~~~~~~~-~~~~~----~d~~l~~~~~-------------~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~--L~~l 639 (642)
+....... +..+. .......... .......+.+++.+||+.+|++||++.+++.. ++.+
T Consensus 217 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~ 295 (330)
T cd07834 217 NLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQL 295 (330)
T ss_pred HHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhh
Confidence 11111100 00000 0000000000 00012356789999999999999999999873 4444
No 368
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=4.6e-33 Score=278.26 Aligned_cols=247 Identities=23% Similarity=0.342 Sum_probs=194.2
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC-ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEe
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
.+.||+|++|.+|++.....+ +.+++|.+.... ......++.+|++++++++|+||+++++++......++|||
T Consensus 5 ~~~i~~g~~~~v~~~~~~~~~-----~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (256)
T cd08530 5 LKKLGKGSYGSVYKVKRLSDN-----QFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVME 79 (256)
T ss_pred eeeecCCCceeEEEEEECCCC-----CEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEeh
Confidence 467899999999999877654 789999987542 22334678899999999999999999999999999999999
Q ss_pred eccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCC
Q 006522 426 FIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPG 505 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 505 (642)
|+++++|.+++...... ...+++..+..++.|++.||+|||+ .+++|+||||+||++++++.+|++|||+++....
T Consensus 80 ~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~l~~al~~lh~---~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~ 155 (256)
T cd08530 80 YAPFGDLSKAISKRKKK-RKLIPEQEIWRIFIQLLRGLQALHE---QKILHRDLKSANILLVANDLVKIGDLGISKVLKK 155 (256)
T ss_pred hcCCCCHHHHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCcceEEEecCCcEEEeeccchhhhcc
Confidence 99999999998763321 1358999999999999999999999 8999999999999999999999999999876543
Q ss_pred CCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHh
Q 006522 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR 585 (642)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~ 585 (642)
.. .....++..|++||... +..++.++|+||+|+++|||++|+.||..... .........
T Consensus 156 ~~--------------~~~~~~~~~~~~Pe~~~-~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~-----~~~~~~~~~ 215 (256)
T cd08530 156 NM--------------AKTQIGTPHYMAPEVWK-GRPYSYKSDIWSLGCLLYEMATFAPPFEARSM-----QDLRYKVQR 215 (256)
T ss_pred CC--------------cccccCCccccCHHHHC-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHhc
Confidence 21 11234677899999854 46788999999999999999999999975321 222222221
Q ss_pred ccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 586 ERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 586 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
... . .+.. .....+.+++.+|++.+|++||++.|+++
T Consensus 216 ~~~--~-~~~~---------~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 216 GKY--P-PIPP---------IYSQDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred CCC--C-CCch---------hhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 111 1 1111 11234667889999999999999999875
No 369
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=1.3e-32 Score=275.01 Aligned_cols=248 Identities=22% Similarity=0.356 Sum_probs=196.3
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCc-cccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEe
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA-TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
...||+|++|.||++....++ ..+++|++..... ....+.+.+|++++++++|||++++++.+...+..++|+|
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~-----~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e 79 (258)
T cd08215 5 IKQIGKGSFGKVYLVRRKSDG-----KLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVME 79 (258)
T ss_pred EeeeccCCCeEEEEEEEcCCC-----cEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEE
Confidence 357899999999999987654 7899999876532 2334678999999999999999999999999999999999
Q ss_pred eccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCC
Q 006522 426 FIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPG 505 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 505 (642)
|+++++|.+++...... ...+++..+..++.+++.||+|||+ .+++|+||+|+||++++++.++|+|||.+.....
T Consensus 80 ~~~~~~L~~~l~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lh~---~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~ 155 (258)
T cd08215 80 YADGGDLSQKIKKQKKE-GKPFPEEQILDWFVQLCLALKYLHS---RKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSS 155 (258)
T ss_pred ecCCCcHHHHHHHhhcc-CCCcCHHHHHHHHHHHHHHHHHHHh---CCEecccCChHHeEEcCCCcEEECCccceeeccc
Confidence 99999999999765311 1359999999999999999999999 7999999999999999999999999999876543
Q ss_pred CCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHh
Q 006522 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR 585 (642)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~ 585 (642)
... ......|++.|+|||.... ..++.++||||+|+++|+|++|+.||.... ..........
T Consensus 156 ~~~------------~~~~~~~~~~y~~pe~~~~-~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~-----~~~~~~~~~~ 217 (258)
T cd08215 156 TVD------------LAKTVVGTPYYLSPELCQN-KPYNYKSDIWSLGCVLYELCTLKHPFEGEN-----LLELALKILK 217 (258)
T ss_pred Ccc------------eecceeeeecccChhHhcc-CCCCccccHHHHHHHHHHHHcCCCCCCCCc-----HHHHHHHHhc
Confidence 210 0112356778999998544 678899999999999999999999986432 2233333322
Q ss_pred cc-CCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 586 ER-RPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 586 ~~-~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
.. .++...++ ..+.+++.+||+.+|++||++.|+++
T Consensus 218 ~~~~~~~~~~~-------------~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 218 GQYPPIPSQYS-------------SELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred CCCCCCCCCCC-------------HHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 21 11111111 24556888999999999999999875
No 370
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=1.1e-32 Score=279.72 Aligned_cols=258 Identities=19% Similarity=0.288 Sum_probs=192.8
Q ss_pred cccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC-ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 348 ~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
..||+|++|.||++.....+ +.+++|.+.... .....+.+..|+.++++++|+||+++++++...+..++||||
T Consensus 5 ~~ig~g~~~~vy~~~~~~~~-----~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 79 (282)
T cd07829 5 EKLGEGTYGVVYKARDKKTG-----EIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEY 79 (282)
T ss_pred hcccccCcceEEEeeecCCC-----cEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecC
Confidence 56899999999999988754 899999998653 222236788999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCC
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 506 (642)
++ ++|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||+|+||++++++.+||+|||+++.....
T Consensus 80 ~~-~~l~~~i~~~~----~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~ 151 (282)
T cd07829 80 CD-MDLKKYLDKRP----GPLSPNLIKSIMYQLLRGLAYCHS---HRILHRDLKPQNILINRDGVLKLADFGLARAFGIP 151 (282)
T ss_pred cC-cCHHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChheEEEcCCCCEEEecCCcccccCCC
Confidence 98 59999998653 248999999999999999999999 89999999999999999999999999998765432
Q ss_pred CcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHhc
Q 006522 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRE 586 (642)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~~ 586 (642)
.. ......++..|+|||.+.....++.++|||||||++|||++|+.||...... ..+.... .....
T Consensus 152 ~~------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~-~~~~~~~-~~~~~ 217 (282)
T cd07829 152 LR------------TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEI-DQLFKIF-QILGT 217 (282)
T ss_pred cc------------ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHH-HHHHHHH-HHhCC
Confidence 11 0012234567999998665447899999999999999999999999653221 1111111 00000
Q ss_pred c--------CC-------CccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 587 R--------RP-------LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 587 ~--------~~-------~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
. .. ............. ......+.+++.+||+.||++||++.|++.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 218 PTEESWPGVTKLPDYKPTFPKFPPKDLEKVL--PRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred CcHHHHHhhcccccccccccccCccchHHhc--ccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 0 00 0000000000000 001245788999999999999999999875
No 371
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=4.9e-33 Score=281.97 Aligned_cols=256 Identities=19% Similarity=0.293 Sum_probs=195.9
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC--ccccHHHHHHHHHHHhccc-CCCeeeEEEEEEeCCceEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQ-HPNIVRLKAFYYANDEKLLI 423 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lv 423 (642)
...||+|++|.||++....++ +.|++|.+.... .....+.+.+|++++.+++ ||||+++++++...+..++|
T Consensus 6 ~~~lg~g~~~~vy~~~~~~~~-----~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 6 GKIIGEGSFSTVVLAKEKETN-----KEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred eeeecCCCceEEEEEEEcCCC-----CEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 457899999999999987654 889999987532 1222367889999999998 99999999999999999999
Q ss_pred EeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccC
Q 006522 424 SDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLL 503 (642)
Q Consensus 424 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 503 (642)
|||+++++|.+++.... .+++..+..|+.|++.||+|||+ .+++|+||||+||+++.++.++++|||++...
T Consensus 81 ~e~~~~~~L~~~l~~~~-----~l~~~~~~~i~~ql~~~l~~Lh~---~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~ 152 (280)
T cd05581 81 LEYAPNGELLQYIRKYG-----SLDEKCTRFYAAEILLALEYLHS---KGIIHRDLKPENILLDKDMHIKITDFGTAKVL 152 (280)
T ss_pred EcCCCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEecCCcccccc
Confidence 99999999999997653 49999999999999999999999 89999999999999999999999999999876
Q ss_pred CCCCcccccce--------eeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCccc
Q 006522 504 PGTSKVTKNET--------IVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKG 575 (642)
Q Consensus 504 ~~~~~~~~~~~--------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~ 575 (642)
........... ............++..|+|||.... ..++.++||||+|++++|+++|+.||.....
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~---- 227 (280)
T cd05581 153 DPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNE-KPAGKSSDLWALGCIIYQMLTGKPPFRGSNE---- 227 (280)
T ss_pred CCccccccCCCCCccccccccccccccccccCCccccCHHHhCC-CCCChhhhHHHHHHHHHHHHhCCCCCCCccH----
Confidence 54321100000 0000011123457788999998544 6688999999999999999999999975321
Q ss_pred HHHHHHHHHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCH----HHHHH
Q 006522 576 LESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRM----RTVSE 634 (642)
Q Consensus 576 l~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~----~ev~~ 634 (642)
....+........++..+++ .+.+++.+||+.+|.+||++ .|+++
T Consensus 228 -~~~~~~~~~~~~~~~~~~~~-------------~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 228 -YLTFQKILKLEYSFPPNFPP-------------DAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred -HHHHHHHHhcCCCCCCccCH-------------HHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 22222332323333333322 34568888999999999999 66653
No 372
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.9e-34 Score=279.29 Aligned_cols=256 Identities=21% Similarity=0.254 Sum_probs=194.7
Q ss_pred cccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCcc------ccHHHHHHHHHHHhcccCCCeeeEEEEEEeC-Cce
Q 006522 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT------WRFKDFESEVEAIARVQHPNIVRLKAFYYAN-DEK 420 (642)
Q Consensus 348 ~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~-~~~ 420 (642)
.+||+|||+.||++.+-... +.||||+-.....+ ...+...+|..|-+.++||.||++|+||.-+ +..
T Consensus 469 hLLGrGGFSEVyKAFDl~Eq-----RYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsF 543 (775)
T KOG1151|consen 469 HLLGRGGFSEVYKAFDLTEQ-----RYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSF 543 (775)
T ss_pred HHhccccHHHHHHhcccchh-----heeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccc
Confidence 68999999999999987765 78999986433221 1235678999999999999999999999754 578
Q ss_pred EEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeC---CCCCeEEecc
Q 006522 421 LLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLD---DELHPCISGF 497 (642)
Q Consensus 421 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~---~~~~~kl~Df 497 (642)
+-|+|||+|.+|+-+|+.++. +++.....|+.||+.||.||.+.. .+|||-||||.||||. ..|.+||.||
T Consensus 544 CTVLEYceGNDLDFYLKQhkl-----mSEKEARSIiMQiVnAL~YLNEik-pPIIHYDLKPgNILLv~GtacGeIKITDF 617 (775)
T KOG1151|consen 544 CTVLEYCEGNDLDFYLKQHKL-----MSEKEARSIIMQIVNALKYLNEIK-PPIIHYDLKPGNILLVNGTACGEIKITDF 617 (775)
T ss_pred eeeeeecCCCchhHHHHhhhh-----hhHHHHHHHHHHHHHHHHHHhccC-CCeeeeccCCccEEEecCcccceeEeeec
Confidence 899999999999999988764 889999999999999999999865 6999999999999994 4689999999
Q ss_pred cccccCCCCCcccccceeeecCCCcccccCCCcccCccccccC---CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcc
Q 006522 498 GLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYG---SKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGK 574 (642)
Q Consensus 498 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~ 574 (642)
|+++++.++++........+ ...+||.+|.+||.+.-+ .+++.|+||||.|||+|..+.|+.||.......
T Consensus 618 GLSKIMdddSy~~vdGmeLT-----SQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQ- 691 (775)
T KOG1151|consen 618 GLSKIMDDDSYNSVDGMELT-----SQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQ- 691 (775)
T ss_pred chhhhccCCccCcccceeee-----cccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHH-
Confidence 99999987765433322222 246799999999987654 457899999999999999999999996532211
Q ss_pred cHHHHH--HHHHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHH
Q 006522 575 GLESLV--RKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVS 633 (642)
Q Consensus 575 ~l~~~~--~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~ 633 (642)
++.+.- .+...-..|....++++. -.++.+|+++.-++|....++.
T Consensus 692 dILqeNTIlkAtEVqFP~KPvVsseA-------------kaFIRRCLaYRKeDR~DV~qLA 739 (775)
T KOG1151|consen 692 DILQENTILKATEVQFPPKPVVSSEA-------------KAFIRRCLAYRKEDRIDVQQLA 739 (775)
T ss_pred HHHhhhchhcceeccCCCCCccCHHH-------------HHHHHHHHHhhhhhhhhHHHHc
Confidence 111110 001111122233344333 3477789988888887766654
No 373
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=6.8e-33 Score=277.98 Aligned_cols=248 Identities=21% Similarity=0.308 Sum_probs=185.6
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCC---C-ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG---D-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLL 422 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~---~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 422 (642)
...||+|+||.||++...... ..+++|.++.. . ......++.+|+.++++++||||+++++++...+..++
T Consensus 5 ~~~ig~g~~g~v~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 79 (260)
T cd08222 5 QQRLGKGSFGTVYLVKDKKAV-----AEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCI 79 (260)
T ss_pred eeeecCCCCceEEEEEecCCC-----CcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEE
Confidence 457999999999999876653 33444444321 1 11222467789999999999999999999999999999
Q ss_pred EEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEeccccccc
Q 006522 423 ISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRL 502 (642)
Q Consensus 423 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 502 (642)
||||+++++|.+++...... ...+++..+..++.|++.||.|||+ .+++|+||||+||++++ +.+||+|||+++.
T Consensus 80 v~e~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~h~~l~~~nili~~-~~~~l~d~g~~~~ 154 (260)
T cd08222 80 ITEYCEGRDLDCKLEELKHT-GKTLSENQVCEWFIQLLLGVHYMHQ---RRILHRDLKAKNIFLKN-NLLKIGDFGVSRL 154 (260)
T ss_pred EEEeCCCCCHHHHHHHHhhc-ccccCHHHHHHHHHHHHHHHHHHHH---cCccccCCChhheEeec-CCEeecccCceee
Confidence 99999999999998753221 1359999999999999999999999 89999999999999975 5699999999876
Q ss_pred CCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHH
Q 006522 503 LPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRK 582 (642)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~ 582 (642)
....... .....|+..|+|||... +..++.++||||||+++|+|++|..||... ........
T Consensus 155 ~~~~~~~------------~~~~~~~~~~~~pe~~~-~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~-----~~~~~~~~ 216 (260)
T cd08222 155 LMGSCDL------------ATTFTGTPYYMSPEALK-HQGYDSKSDIWSLGCILYEMCCLAHAFEGQ-----NFLSVVLR 216 (260)
T ss_pred cCCCccc------------ccCCCCCcCccCHHHHc-cCCCCchhhHHHHHHHHHHHHhCCCCCCCc-----cHHHHHHH
Confidence 5432110 11234677899999854 467888999999999999999999998632 12223333
Q ss_pred HHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 583 AFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 583 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
......+ .+.. .....+.+++.+||+.+|++||++.|+++
T Consensus 217 ~~~~~~~---~~~~---------~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 217 IVEGPTP---SLPE---------TYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred HHcCCCC---CCcc---------hhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 2222111 1111 11124566889999999999999999975
No 374
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=1.9e-32 Score=308.22 Aligned_cols=143 Identities=22% Similarity=0.323 Sum_probs=127.2
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCc--cccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA--TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 424 (642)
...||+|+||.||+|+....+ +.||||+++.... ......+.+|+.++..++||||+++++++...+..|+||
T Consensus 9 ~~~LG~G~fg~Vy~a~~~~~~-----~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm 83 (669)
T cd05610 9 VKPISRGAFGKVYLGRKKNNS-----KLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM 83 (669)
T ss_pred EEEEecCCCeEEEEEEECCCC-----cEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence 467999999999999988654 7999999975422 222367889999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEeccccccc
Q 006522 425 DFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRL 502 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 502 (642)
||+++++|.++++... .+++..++.|+.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 84 Ey~~g~~L~~li~~~~-----~l~~~~~~~i~~qil~aL~yLH~---~gIiHrDLKP~NILl~~~g~vkL~DFGls~~ 153 (669)
T cd05610 84 EYLIGGDVKSLLHIYG-----YFDEEMAVKYISEVALALDYLHR---HGIIHRDLKPDNMLISNEGHIKLTDFGLSKV 153 (669)
T ss_pred eCCCCCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCccHHHEEEcCCCCEEEEeCCCCcc
Confidence 9999999999997643 38889999999999999999999 7999999999999999999999999999874
No 375
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=8e-33 Score=273.44 Aligned_cols=221 Identities=21% Similarity=0.256 Sum_probs=172.6
Q ss_pred cCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEeeccCCcH
Q 006522 353 SKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSL 432 (642)
Q Consensus 353 g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL 432 (642)
|.+|.||++++..++ +.+|+|++.... .+.+|...+....||||+++++++...+..++||||+++|+|
T Consensus 4 g~~~~v~~~~~~~~~-----~~~~~K~i~~~~------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 72 (237)
T cd05576 4 GVIDKVLLVMDTRTQ-----QTFILKGLRKSS------EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKL 72 (237)
T ss_pred cccceEEEEEEccCC-----cEEEEEeecchh------hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCH
Confidence 889999999998776 789999997642 233455556666899999999999999999999999999999
Q ss_pred HHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCCCccccc
Q 006522 433 YAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKN 512 (642)
Q Consensus 433 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 512 (642)
.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.++++|||.+.......
T Consensus 73 ~~~l~~~~-----~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~----- 139 (237)
T cd05576 73 WSHISKFL-----NIPEECVKRWAAEMVVALDALHR---EGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSC----- 139 (237)
T ss_pred HHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEEcCCCCEEEecccchhcccccc-----
Confidence 99997643 38999999999999999999999 899999999999999999999999999876543221
Q ss_pred ceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHhccCCCcc
Q 006522 513 ETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSE 592 (642)
Q Consensus 513 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~ 592 (642)
....++..|+|||... +..++.++||||+||++|||++|+.|+....... . ......++.
T Consensus 140 ----------~~~~~~~~y~aPE~~~-~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~-------~--~~~~~~~~~ 199 (237)
T cd05576 140 ----------DGEAVENMYCAPEVGG-ISEETEACDWWSLGAILFELLTGKTLVECHPSGI-------N--THTTLNIPE 199 (237)
T ss_pred ----------ccCCcCccccCCcccC-CCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc-------c--cccccCCcc
Confidence 0123456699999843 4678899999999999999999998875321100 0 000001122
Q ss_pred ccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHH
Q 006522 593 VIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMR 630 (642)
Q Consensus 593 ~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ 630 (642)
.+++ .+.+++.+|++.||++||++.
T Consensus 200 ~~~~-------------~~~~li~~~l~~dp~~R~~~~ 224 (237)
T cd05576 200 WVSE-------------EARSLLQQLLQFNPTERLGAG 224 (237)
T ss_pred cCCH-------------HHHHHHHHHccCCHHHhcCCC
Confidence 2222 345688889999999999974
No 376
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=100.00 E-value=7.4e-33 Score=269.03 Aligned_cols=265 Identities=18% Similarity=0.264 Sum_probs=211.2
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeC-CceEEEE
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN-DEKLLIS 424 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~-~~~~lv~ 424 (642)
...++-+|.||.||.|.+.+.......+.|.||.++...++-++..++.|...+..+.|||+..+.+.+.+. +..+.+|
T Consensus 288 l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~P~V~y 367 (563)
T KOG1024|consen 288 LSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYATPFVLY 367 (563)
T ss_pred chhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCcceEEE
Confidence 357888999999999988776555566789999998877777778899999999999999999999998765 5789999
Q ss_pred eeccCCcHHHHHhcCCCC---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccc
Q 006522 425 DFIRNGSLYAALHAGPSD---SLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNR 501 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 501 (642)
.++.-|+|..+|...+.. ....++-.+.+.++.|++.|++|||. .+|||.||..+|++||+...+||+|=.++|
T Consensus 368 ~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~---~~ViHkDiAaRNCvIdd~LqVkltDsaLSR 444 (563)
T KOG1024|consen 368 PATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHN---HGVIHKDIAARNCVIDDQLQVKLTDSALSR 444 (563)
T ss_pred eccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHh---cCcccchhhhhcceehhheeEEeccchhcc
Confidence 999999999999843321 12347778889999999999999999 899999999999999999999999999999
Q ss_pred cCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHH
Q 006522 502 LLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLESLV 580 (642)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~~l~~~~ 580 (642)
.+...++....+. ...+..||+||.+.. ..|+.++|||||||+||||+| |+.||...+ ...+..++
T Consensus 445 DLFP~DYhcLGDn----------EnRPvkWMslEal~n-~~yssasDvWsfGVllWELmtlg~~PyaeID--PfEm~~yl 511 (563)
T KOG1024|consen 445 DLFPGDYHCLGDN----------ENRPVKWMSLEALQN-SHYSSASDVWSFGVLLWELMTLGKLPYAEID--PFEMEHYL 511 (563)
T ss_pred ccCcccccccCCC----------CCCcccccCHHHHhh-hhhcchhhhHHHHHHHHHHHhcCCCCccccC--HHHHHHHH
Confidence 8876654432221 122346999998554 789999999999999999999 999997532 22233333
Q ss_pred HHHHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhhhc
Q 006522 581 RKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 641 (642)
Q Consensus 581 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l~~ 641 (642)
+..++-..| + .+..+++.+|..||..+|++||++.+++.-|.+...
T Consensus 512 kdGyRlaQP----~-----------NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~ 557 (563)
T KOG1024|consen 512 KDGYRLAQP----F-----------NCPDELFTVMACCWALLPEERPSFSQLVICLSEFHT 557 (563)
T ss_pred hccceecCC----C-----------CCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHH
Confidence 333322222 1 233467789999999999999999999999988643
No 377
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9.1e-35 Score=266.96 Aligned_cols=265 Identities=19% Similarity=0.257 Sum_probs=196.5
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC-ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeC--------
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYAN-------- 417 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~-------- 417 (642)
...+|+|.||.||+++.++++ +.||+|++--.. ....-...++|+.+|..++|+|++.+++.|...
T Consensus 22 ~~kigqGtfgeVFkAr~~n~~-----kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r 96 (376)
T KOG0669|consen 22 LAKIGQGTFGEVFKARSKNTG-----KKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDR 96 (376)
T ss_pred HHhcCCchHHHHHHHhhcCcc-----chhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccc
Confidence 467999999999999998876 778888764321 111225678999999999999999999988653
Q ss_pred CceEEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecc
Q 006522 418 DEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGF 497 (642)
Q Consensus 418 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~Df 497 (642)
...|+||++|+. +|..+|..... .++...+.+++.++..||.|+|+ ..|+|||+|++|+||+.++.+||+||
T Consensus 97 ~t~ylVf~~ceh-DLaGlLsn~~v----r~sls~Ikk~Mk~Lm~GL~~iHr---~kilHRDmKaaNvLIt~dgilklADF 168 (376)
T KOG0669|consen 97 ATFYLVFDFCEH-DLAGLLSNRKV----RFSLSEIKKVMKGLMNGLYYIHR---NKILHRDMKAANVLITKDGILKLADF 168 (376)
T ss_pred ceeeeeHHHhhh-hHHHHhcCccc----cccHHHHHHHHHHHHHHHHHHHH---hhHHhhcccHhhEEEcCCceEEeecc
Confidence 247999999998 99999975532 38889999999999999999999 89999999999999999999999999
Q ss_pred cccccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHH
Q 006522 498 GLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLE 577 (642)
Q Consensus 498 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~ 577 (642)
|+++.+...... ...+.+..+.|.+|.+||.+++.+.|+++.|||.-|||+.||.||.+-+.+.... ...
T Consensus 169 Glar~fs~~~n~--------~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteq--qql 238 (376)
T KOG0669|consen 169 GLARAFSTSKNV--------VKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQ--QQL 238 (376)
T ss_pred ccccceeccccc--------CCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHH--HHH
Confidence 999876544321 1222345667899999999888889999999999999999999999888763321 112
Q ss_pred HHHHHHHhc----cCC------CccccChh-hhhch-hH-HHHH------HHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 578 SLVRKAFRE----RRP------LSEVIDPA-LVKEI-HA-KRQV------LATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 578 ~~~~~~~~~----~~~------~~~~~d~~-l~~~~-~~-~~~~------~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
..+...... .+| +.+.+.-+ +.+.. .. ...+ ...++++-..+..||.+|+++.+++.
T Consensus 239 ~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~aln 314 (376)
T KOG0669|consen 239 HLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALN 314 (376)
T ss_pred HHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhc
Confidence 222222111 111 11111000 11000 00 1112 26778999999999999999998875
No 378
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-33 Score=276.13 Aligned_cols=238 Identities=19% Similarity=0.296 Sum_probs=187.7
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC--ccccHHHHHHHHHHHhcc-cCCCeeeEEEEEEeCCceEE
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLL 422 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~l 422 (642)
+-.+||+|+||.|..+..+... ..+|||++++.- ....++--+.|-++|+.- +-|.+|+++.+|+..+..|+
T Consensus 353 Fl~VlGKGSFGKVlLaerkgtd-----ELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyF 427 (683)
T KOG0696|consen 353 FLMVLGKGSFGKVLLAERKGTD-----ELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYF 427 (683)
T ss_pred eEEEeccCccceeeeecccCcc-----hhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheee
Confidence 4579999999999999876654 789999998751 112224445677777766 67899999999999999999
Q ss_pred EEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEeccccccc
Q 006522 423 ISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRL 502 (642)
Q Consensus 423 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 502 (642)
||||+.||+|.-.+++.+. +-+..++.++.+||-||-|||+ ++||.||||.+||+||.+|++||+|||+++.
T Consensus 428 VMEyvnGGDLMyhiQQ~Gk-----FKEp~AvFYAaEiaigLFFLh~---kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKE 499 (683)
T KOG0696|consen 428 VMEYVNGGDLMYHIQQVGK-----FKEPVAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKE 499 (683)
T ss_pred EEEEecCchhhhHHHHhcc-----cCCchhhhhhHHHHHHhhhhhc---CCeeeeeccccceEeccCCceEeeecccccc
Confidence 9999999999999987664 6667889999999999999999 8999999999999999999999999999985
Q ss_pred CCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHH
Q 006522 503 LPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRK 582 (642)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~ 582 (642)
--- .+..+.+.+||+-|+|||++.. +.|+..+|.|||||+||||+.|+.||++.+. .+..+.
T Consensus 500 ni~------------~~~TTkTFCGTPdYiAPEIi~Y-qPYgksvDWWa~GVLLyEmlaGQpPFdGeDE-----~elF~a 561 (683)
T KOG0696|consen 500 NIF------------DGVTTKTFCGTPDYIAPEIIAY-QPYGKSVDWWAFGVLLYEMLAGQPPFDGEDE-----DELFQA 561 (683)
T ss_pred ccc------------CCcceeeecCCCcccccceEEe-cccccchhHHHHHHHHHHHHcCCCCCCCCCH-----HHHHHH
Confidence 321 2223346799999999999666 8999999999999999999999999987443 334444
Q ss_pred HHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCC
Q 006522 583 AFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRP 627 (642)
Q Consensus 583 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP 627 (642)
+.......+..++. +.+.+....+...|.+|.
T Consensus 562 I~ehnvsyPKslSk-------------EAv~ickg~ltK~P~kRL 593 (683)
T KOG0696|consen 562 IMEHNVSYPKSLSK-------------EAVAICKGLLTKHPGKRL 593 (683)
T ss_pred HHHccCcCcccccH-------------HHHHHHHHHhhcCCcccc
Confidence 44443333333332 233455556777888774
No 379
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-32 Score=291.99 Aligned_cols=248 Identities=22% Similarity=0.315 Sum_probs=200.5
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcc-cCCCeeeEEEEEEe-----CCce
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYA-----NDEK 420 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~-----~~~~ 420 (642)
..+||+|.+|.||+++..+.+ +..|+|++....+.+ ++++.|.++++.. +|||++.++|+|.. +++.
T Consensus 24 ~evig~Gtygkv~k~k~~~~~-----~~aa~kI~~~~~d~d--eEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqL 96 (953)
T KOG0587|consen 24 IEVIGNGTYGKVYKGRHVKTG-----QLAAIKIMDPTEDEE--EEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQL 96 (953)
T ss_pred EEEEeeccceeEEEEeeeecC-----ceeeeEeecCCcccc--HHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeE
Confidence 468999999999999988775 788888887654433 7788999999888 79999999999975 4689
Q ss_pred EEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEeccccc
Q 006522 421 LLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLN 500 (642)
Q Consensus 421 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla 500 (642)
+||||||.+||..|+++.... ..+.|..+..|+++++.|+.+||. ..++|||+|-.|||++.++.+|++|||++
T Consensus 97 WLVMEfC~gGSVTDLVKn~~g---~rl~E~~IaYI~re~lrgl~HLH~---nkviHRDikG~NiLLT~e~~VKLvDFGvS 170 (953)
T KOG0587|consen 97 WLVMEFCGGGSVTDLVKNTKG---NRLKEEWIAYILREILRGLAHLHN---NKVIHRDIKGQNVLLTENAEVKLVDFGVS 170 (953)
T ss_pred EEEeeccCCccHHHHHhhhcc---cchhhHHHHHHHHHHHHHHHHHhh---cceeeecccCceEEEeccCcEEEeeeeee
Confidence 999999999999999987653 359999999999999999999999 89999999999999999999999999999
Q ss_pred ccCCCCCcccccceeeecCCCcccccCCCcccCccccccC----CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccH
Q 006522 501 RLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYG----SKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGL 576 (642)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l 576 (642)
..+..+ .....+..||+.|||||++... ..|+.++|+||+|++..||.-|.+|+.++..
T Consensus 171 aQldsT------------~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHP----- 233 (953)
T KOG0587|consen 171 AQLDST------------VGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHP----- 233 (953)
T ss_pred eeeecc------------cccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcch-----
Confidence 876533 2233467899999999986553 3467899999999999999999999876432
Q ss_pred HHHHHHHHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 577 ESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 577 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
++..+.-.+. =.|.+ ........++.+++..|+..|-++||++.++++
T Consensus 234 ---mraLF~IpRN----PPPkL---krp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 234 ---MRALFLIPRN----PPPKL---KRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred ---hhhhccCCCC----CCccc---cchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 1112221111 11222 123445677889999999999999999988764
No 380
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=2e-33 Score=281.71 Aligned_cols=243 Identities=19% Similarity=0.293 Sum_probs=188.7
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC-ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEe
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
.++||+|.||+||-|..++.+ +.||||.+.+-. ...+..+++.|+.||.+++||.||.+...|+..+..+.|||
T Consensus 569 devLGSGQFG~VYgg~hRktG-----rdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVME 643 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTG-----RDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVME 643 (888)
T ss_pred HhhccCCcceeeecceecccC-----ceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEeh
Confidence 489999999999999998876 899999998752 22333778999999999999999999999999999999999
Q ss_pred eccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCC---CCCeEEeccccccc
Q 006522 426 FIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDD---ELHPCISGFGLNRL 502 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~---~~~~kl~DfGla~~ 502 (642)
-+.| |..+.+-..... .|++.....+..||+.||.|||. ++|+|+||||+|||+.+ .-.+||||||.|++
T Consensus 644 Kl~G-DMLEMILSsEkg---RL~er~TkFlvtQIL~ALr~LH~---knIvHCDLKPENVLLas~~~FPQvKlCDFGfARi 716 (888)
T KOG4236|consen 644 KLHG-DMLEMILSSEKG---RLPERITKFLVTQILVALRYLHF---KNIVHCDLKPENVLLASASPFPQVKLCDFGFARI 716 (888)
T ss_pred hhcc-hHHHHHHHhhcc---cchHHHHHHHHHHHHHHHHHhhh---cceeeccCCchheeeccCCCCCceeeccccceee
Confidence 9955 666665443332 38999999999999999999999 89999999999999953 45799999999999
Q ss_pred CCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHH
Q 006522 503 LPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRK 582 (642)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~ 582 (642)
+.+... .+..+||+.|.|||++.. ..|+..-|+||.|||+|--++|..||.. +.++.+.++.
T Consensus 717 IgEksF-------------RrsVVGTPAYLaPEVLrn-kGyNrSLDMWSVGVIiYVsLSGTFPFNE----dEdIndQIQN 778 (888)
T KOG4236|consen 717 IGEKSF-------------RRSVVGTPAYLAPEVLRN-KGYNRSLDMWSVGVIIYVSLSGTFPFNE----DEDINDQIQN 778 (888)
T ss_pred cchhhh-------------hhhhcCCccccCHHHHhh-ccccccccceeeeEEEEEEecccccCCC----ccchhHHhhc
Confidence 875531 236789999999999654 7899999999999999999999999964 3344444443
Q ss_pred HHh-ccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHH
Q 006522 583 AFR-ERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTV 632 (642)
Q Consensus 583 ~~~-~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev 632 (642)
... -+..-...+++. .++++...++..=++|-|....
T Consensus 779 AaFMyPp~PW~eis~~-------------AidlIn~LLqVkm~kRysvdk~ 816 (888)
T KOG4236|consen 779 AAFMYPPNPWSEISPE-------------AIDLINNLLQVKMRKRYSVDKS 816 (888)
T ss_pred cccccCCCchhhcCHH-------------HHHHHHHHHHHHHHHhcchHhh
Confidence 321 111112233333 3445555666666666665443
No 381
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-32 Score=245.60 Aligned_cols=226 Identities=19% Similarity=0.274 Sum_probs=176.0
Q ss_pred ccHHHHHhhcccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcc-cCCCeeeEEEEEE
Q 006522 337 LELEDLLRASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYY 415 (642)
Q Consensus 337 ~~~~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~ 415 (642)
+++.+-.......||+|++|.|-+-++...+ +..|||++...-.....++.++|+.+..+. ..|.+|.++|.+.
T Consensus 41 ~eV~ad~L~~i~elGrGayG~vekmrh~~sg-----~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~ 115 (282)
T KOG0984|consen 41 FEVPADDLVGIEELGRGAYGVVEKMRHIQSG-----TIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALF 115 (282)
T ss_pred cccchhhhhhhhhhcCCccchhhheeeccCC-----eEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhh
Confidence 4443333345678999999999998887765 899999998775444557888999876655 8999999999999
Q ss_pred eCCceEEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEe
Q 006522 416 ANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCIS 495 (642)
Q Consensus 416 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~ 495 (642)
.....++.||.|.- ||..+..+--..+ ..+++...-+|+..|.+||.|||+. ..+||||+||+|||++.+|++|+|
T Consensus 116 regdvwIcME~M~t-Sldkfy~~v~~~g-~~ipE~vlGkIa~Svv~al~~L~~k--L~vIHRDvKPsNiLIn~~GqVKiC 191 (282)
T KOG0984|consen 116 REGDVWICMELMDT-SLDKFYRKVLKKG-GTIPEDVLGKIAVSVVHALEFLHSK--LSVIHRDVKPSNILINYDGQVKIC 191 (282)
T ss_pred ccccEEEeHHHhhh-hHHHHHHHHHhcC-CcCchHHhhHhHHHHHHHHHHHHHH--hhhhhccCCcceEEEccCCcEEEc
Confidence 99999999999965 8876654322111 2488899999999999999999995 579999999999999999999999
Q ss_pred cccccccCCCCCcccccceeeecCCCcccccCCCcccCccccccC---CCCCcccchHHHHHHHHHHHhCCCCCCCCCCC
Q 006522 496 GFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYG---SKFTQKCDVYSFGIVLLEILTGRLPDAGPEND 572 (642)
Q Consensus 496 DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~ 572 (642)
|||++-.+.++.. .+...|...|||||.+..+ ..|+-|+||||+|+++.||.+++.||+.-..
T Consensus 192 DFGIsG~L~dSiA-------------kt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~t- 257 (282)
T KOG0984|consen 192 DFGISGYLVDSIA-------------KTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGT- 257 (282)
T ss_pred ccccceeehhhhH-------------HHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCC-
Confidence 9999977654321 1123566779999975432 3689999999999999999999999975333
Q ss_pred cccHHHHHHHHHhccC
Q 006522 573 GKGLESLVRKAFRERR 588 (642)
Q Consensus 573 ~~~l~~~~~~~~~~~~ 588 (642)
-.+.+++...+..
T Consensus 258 ---pF~qLkqvVeep~ 270 (282)
T KOG0984|consen 258 ---PFQQLKQVVEEPS 270 (282)
T ss_pred ---HHHHHHHHhcCCC
Confidence 2344455554443
No 382
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-32 Score=238.38 Aligned_cols=197 Identities=20% Similarity=0.285 Sum_probs=166.7
Q ss_pred cccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCcccc-HHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWR-FKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 348 ~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~-~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
+.||+|.+|+||+++..+.. ..||+|+++-.++.+. -....+|+.+++.++|.|||++++...++...-+|+||
T Consensus 8 ekigegtygtvfkarn~~t~-----eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 8 EKIGEGTYGTVFKARNRETH-----EIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred HhhcCCcceeeEecccCCcc-----ceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 56999999999999987765 8999999986543332 36789999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCC
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 506 (642)
|.. +|..+...-.+ .++.+....++.|+++||.|+|+ ..+.|||+||.|.|++.+|+.|++|||+++.+.-.
T Consensus 83 cdq-dlkkyfdslng----~~d~~~~rsfmlqllrgl~fchs---hnvlhrdlkpqnllin~ngelkladfglarafgip 154 (292)
T KOG0662|consen 83 CDQ-DLKKYFDSLNG----DLDPEIVRSFMLQLLRGLGFCHS---HNVLHRDLKPQNLLINRNGELKLADFGLARAFGIP 154 (292)
T ss_pred hhH-HHHHHHHhcCC----cCCHHHHHHHHHHHHhhhhhhhh---hhhhhccCCcceEEeccCCcEEecccchhhhcCCc
Confidence 976 88888765443 38889999999999999999999 89999999999999999999999999999876432
Q ss_pred CcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCC
Q 006522 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGP 569 (642)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~ 569 (642)
.. -....+.|.+|.+|.++.+..-|++..|+||-|||+.|+.. |++-|.+.
T Consensus 155 vr------------cysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~ 206 (292)
T KOG0662|consen 155 VR------------CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGN 206 (292)
T ss_pred eE------------eeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCC
Confidence 11 01133567889999997776779999999999999999997 66666653
No 383
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.98 E-value=2.2e-32 Score=283.48 Aligned_cols=233 Identities=23% Similarity=0.344 Sum_probs=185.0
Q ss_pred cccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcc-cCCCeeeEEEEEEeCCceEEEEee
Q 006522 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 348 ~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
..+|.|+|+++-.+...... +..+||++.+... +-.+|+.++.+. +||||+++.+.+.+..+.|+|||+
T Consensus 328 ~~~~~gs~s~~~~~~~~~t~-----~~~~vkii~~~~~-----~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~ 397 (612)
T KOG0603|consen 328 EELGEGSFSAVKYCESSPTD-----QEPAVKIISKRAD-----DNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMEL 397 (612)
T ss_pred cccCCCCccceeeeeccccc-----cchhheecccccc-----ccccccchhhhhcCCCcceeecceecCCceeeeeehh
Confidence 44899999999999887776 8899999987622 223678777766 799999999999999999999999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeee-CCCCCeEEecccccccCCC
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILL-DDELHPCISGFGLNRLLPG 505 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl-~~~~~~kl~DfGla~~~~~ 505 (642)
+.+|-+.+.+..... +. ..+..|+.+|+.|+.|||+ ++||||||||+|||+ ++.++++|+|||.++....
T Consensus 398 l~g~ell~ri~~~~~-----~~-~e~~~w~~~lv~Av~~LH~---~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~ 468 (612)
T KOG0603|consen 398 LDGGELLRRIRSKPE-----FC-SEASQWAAELVSAVDYLHE---QGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELER 468 (612)
T ss_pred ccccHHHHHHHhcch-----hH-HHHHHHHHHHHHHHHHHHh---cCeeecCCChhheeecCCCCcEEEEEechhhhCch
Confidence 999999888876542 23 6777899999999999999 899999999999999 5899999999999988754
Q ss_pred CCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHh
Q 006522 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR 585 (642)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~ 585 (642)
.- ...+-|..|.|||+.. ...|++++|+||+|++||||+||+.||.....+ .++.... .
T Consensus 469 ~~---------------~tp~~t~~y~APEvl~-~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~----~ei~~~i-~ 527 (612)
T KOG0603|consen 469 SC---------------DTPALTLQYVAPEVLA-IQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG----IEIHTRI-Q 527 (612)
T ss_pred hh---------------cccchhhcccChhhhc-cCCCCcchhhHHHHHHHHHHHhCCCccccCCch----HHHHHhh-c
Confidence 31 1234567799999955 588999999999999999999999999865443 1222222 1
Q ss_pred ccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 586 ERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 586 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
.. ...+.++.. +.+|+..||+.||.+||+|.++..
T Consensus 528 ~~-~~s~~vS~~-------------AKdLl~~LL~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 528 MP-KFSECVSDE-------------AKDLLQQLLQVDPALRLGADEIGA 562 (612)
T ss_pred CC-ccccccCHH-------------HHHHHHHhccCChhhCcChhhhcc
Confidence 11 122333333 345777799999999999999853
No 384
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.98 E-value=6.4e-33 Score=270.04 Aligned_cols=255 Identities=18% Similarity=0.277 Sum_probs=196.3
Q ss_pred cccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhccc-C-CC----eeeEEEEEEeCCceE
Q 006522 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ-H-PN----IVRLKAFYYANDEKL 421 (642)
Q Consensus 348 ~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-H-~n----Iv~l~~~~~~~~~~~ 421 (642)
..+|+|.||.|-++++.... ..||||+++..... .+..+-|++++.++. + |+ +|.+.+||.-.++.+
T Consensus 95 ~~lGeGtFGkV~ec~D~~~~-----~~vAlKIik~V~kY--reAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiC 167 (415)
T KOG0671|consen 95 DLLGEGTFGKVVECWDRETK-----EHVALKIIKNVDKY--REAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHIC 167 (415)
T ss_pred hhhcCCcccceEEEeecCCC-----ceehHHHHHHHHHH--hhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCceE
Confidence 57899999999999998874 89999999875443 367788999999993 2 33 889999999999999
Q ss_pred EEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeC--------------
Q 006522 422 LISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLD-------------- 487 (642)
Q Consensus 422 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~-------------- 487 (642)
+|+|.+ |-|+++++..+.. .+++...+..|+.|++++++|||+ .+++|-||||+|||+.
T Consensus 168 ivfell-G~S~~dFlk~N~y---~~fpi~~ir~m~~QL~~sv~fLh~---~kl~HTDLKPENILfvss~~~~~~~~k~~~ 240 (415)
T KOG0671|consen 168 IVFELL-GLSTFDFLKENNY---IPFPIDHIRHMGYQLLESVAFLHD---LKLTHTDLKPENILFVSSEYFKTYNPKKKV 240 (415)
T ss_pred EEEecc-ChhHHHHhccCCc---cccchHHHHHHHHHHHHHHHHHHh---cceeecCCChheEEEeccceEEEeccCCcc
Confidence 999988 5599999987654 469999999999999999999999 8999999999999982
Q ss_pred ------CCCCeEEecccccccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh
Q 006522 488 ------DELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT 561 (642)
Q Consensus 488 ------~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t 561 (642)
.+..+||.|||.|+...+.. ...+.|..|+|||++++ -.++.++||||+||||+|++|
T Consensus 241 ~~~r~~ks~~I~vIDFGsAtf~~e~h---------------s~iVsTRHYRAPEViLg-LGwS~pCDvWSiGCIL~Elyt 304 (415)
T KOG0671|consen 241 CFIRPLKSTAIKVIDFGSATFDHEHH---------------STIVSTRHYRAPEVILG-LGWSQPCDVWSIGCILVELYT 304 (415)
T ss_pred ceeccCCCcceEEEecCCcceeccCc---------------ceeeeccccCCchheec-cCcCCccCceeeeeEEEEeec
Confidence 13468999999998754432 13456778999999765 899999999999999999999
Q ss_pred CCCCCCCCCCCcccHHHHHHHHHhccCC------------------Cc------------cccChhhhhchhHHHHHHHH
Q 006522 562 GRLPDAGPENDGKGLESLVRKAFRERRP------------------LS------------EVIDPALVKEIHAKRQVLAT 611 (642)
Q Consensus 562 G~~P~~~~~~~~~~l~~~~~~~~~~~~~------------------~~------------~~~d~~l~~~~~~~~~~~~~ 611 (642)
|..-|.+.++.+. + ...+.+....+. .+ +...|.-........+..++
T Consensus 305 G~~LFqtHen~EH-L-aMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~L 382 (415)
T KOG0671|consen 305 GETLFQTHENLEH-L-AMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQL 382 (415)
T ss_pred cceecccCCcHHH-H-HHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHH
Confidence 9999987553321 1 222222221000 00 00111111111224566789
Q ss_pred HHHHHhcCCCCCCCCCCHHHHHH
Q 006522 612 FHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 612 ~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
++|+.+++..||.+|+|++|++.
T Consensus 383 fDLl~~mL~fDP~~RiTl~EAL~ 405 (415)
T KOG0671|consen 383 FDLLRRMLEFDPARRITLREALS 405 (415)
T ss_pred HHHHHHHHccCccccccHHHHhc
Confidence 99999999999999999999875
No 385
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=7.5e-33 Score=300.82 Aligned_cols=198 Identities=23% Similarity=0.308 Sum_probs=172.6
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCcc--ccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT--WRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 424 (642)
-.+||+|+||.|..++.+..+ +++|+|++.+-..- ....-|..|-.+|.--+.+-||.++-.|++.++.|+||
T Consensus 80 lKvIGrGaFGEV~lVr~k~t~-----~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYlVM 154 (1317)
T KOG0612|consen 80 LKVIGRGAFGEVALVRHKSTE-----KVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLYLVM 154 (1317)
T ss_pred HHHhcccccceeEEEEeeccc-----cchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceEEEE
Confidence 478999999999999998887 89999999873211 11256889999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCC
Q 006522 425 DFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLP 504 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 504 (642)
|||+||||-.++.... ++++.....++.+|.-||+-||+ .|+|||||||+|||||.+|++||+|||.+-.+.
T Consensus 155 dY~pGGDlltLlSk~~-----~~pE~~ArFY~aEiVlAldslH~---mgyVHRDiKPDNvLld~~GHikLADFGsClkm~ 226 (1317)
T KOG0612|consen 155 DYMPGGDLLTLLSKFD-----RLPEDWARFYTAEIVLALDSLHS---MGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMD 226 (1317)
T ss_pred ecccCchHHHHHhhcC-----CChHHHHHHHHHHHHHHHHHHHh---ccceeccCCcceeEecccCcEeeccchhHHhcC
Confidence 9999999999998665 38999999999999999999999 899999999999999999999999999987776
Q ss_pred CCCcccccceeeecCCCcccccCCCcccCcccccc---C-CCCCcccchHHHHHHHHHHHhCCCCCCC
Q 006522 505 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIY---G-SKFTQKCDVYSFGIVLLEILTGRLPDAG 568 (642)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~-~~~~~~sDV~S~Gvvl~el~tG~~P~~~ 568 (642)
.+... .+...+|||-|++||++.. + +.|+..+|.||+||++|||+.|..||+.
T Consensus 227 ~dG~V-----------~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYa 283 (1317)
T KOG0612|consen 227 ADGTV-----------RSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYA 283 (1317)
T ss_pred CCCcE-----------EeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchH
Confidence 54321 2236689999999998543 2 5789999999999999999999999974
No 386
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.97 E-value=2.5e-31 Score=291.73 Aligned_cols=263 Identities=16% Similarity=0.151 Sum_probs=164.4
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEE------EEeCCc
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAF------YYANDE 419 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~------~~~~~~ 419 (642)
..+.||+|+||.||+|++..+.. .....||||++...... +.+..| .+....+.+++.+... +....+
T Consensus 136 l~~~LG~G~FG~VYka~~~~~~~-~~~~~vAvK~~~~~~~~---e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (566)
T PLN03225 136 LGKKLGEGAFGVVYKASLVNKQS-KKEGKYVLKKATEYGAV---EIWMNE--RVRRACPNSCADFVYGFLEPVSSKKEDE 209 (566)
T ss_pred EeEEEeeCCCeEEEEEEEcCCcc-ccCcEEEEEEecccchh---HHHHHH--HHHhhchhhHHHHHHhhhcccccccCCc
Confidence 35789999999999999977611 12278999988653221 212111 1222223333322221 234567
Q ss_pred eEEEEeeccCCcHHHHHhcCCCC---------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCe
Q 006522 420 KLLISDFIRNGSLYAALHAGPSD---------------SLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKI 484 (642)
Q Consensus 420 ~~lv~e~~~~gsL~~~l~~~~~~---------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NI 484 (642)
.++||||+++++|.++++..... ......+..+..|+.|++.||+|||+ .+|+||||||+||
T Consensus 210 ~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~---~gIiHRDLKP~NI 286 (566)
T PLN03225 210 YWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHS---TGIVHRDVKPQNI 286 (566)
T ss_pred eEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHH---CCEEeCcCCHHHE
Confidence 89999999999999999754310 00011234456799999999999999 8999999999999
Q ss_pred eeCC-CCCeEEecccccccCCCCCcccccceeeecCCCcccccCCCcccCccccccCC---------------------C
Q 006522 485 LLDD-ELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGS---------------------K 542 (642)
Q Consensus 485 Ll~~-~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---------------------~ 542 (642)
|+++ ++.+||+|||+++.+...... ......+|+.|||||.+.... .
T Consensus 287 Ll~~~~~~~KL~DFGlA~~l~~~~~~-----------~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~ 355 (566)
T PLN03225 287 IFSEGSGSFKIIDLGAAADLRVGINY-----------IPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLN 355 (566)
T ss_pred EEeCCCCcEEEEeCCCcccccccccc-----------CCcccccCCCccChHHhhccCCCCCCccccccccccchhcccc
Confidence 9985 689999999999865432111 112346788999999643211 2
Q ss_pred CCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHhccCCC-------ccccChhhhhchhH-HHHHHHHHHH
Q 006522 543 FTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPL-------SEVIDPALVKEIHA-KRQVLATFHI 614 (642)
Q Consensus 543 ~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~~~~~~-------~~~~d~~l~~~~~~-~~~~~~~~~l 614 (642)
++.++|||||||++|||+++..|++. .+..+.+......... .....+++...... ........+|
T Consensus 356 ~~~k~DVwSlGviL~el~~~~~~~~~------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dL 429 (566)
T PLN03225 356 LPDRFDIYSAGLIFLQMAFPNLRSDS------NLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWEL 429 (566)
T ss_pred CCCCcccHHHHHHHHHHHhCcCCCch------HHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHH
Confidence 44567999999999999998776542 1111111111111000 00011111100000 0011234579
Q ss_pred HHhcCCCCCCCCCCHHHHHH
Q 006522 615 ALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 615 ~~~Cl~~dP~~RPs~~ev~~ 634 (642)
+.+|++.||++|||++|+++
T Consensus 430 i~~mL~~dP~kR~ta~e~L~ 449 (566)
T PLN03225 430 LKSMMRFKGRQRISAKAALA 449 (566)
T ss_pred HHHHccCCcccCCCHHHHhC
Confidence 99999999999999999986
No 387
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=1.2e-31 Score=274.30 Aligned_cols=212 Identities=21% Similarity=0.276 Sum_probs=173.7
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCcc--ccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT--WRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLIS 424 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 424 (642)
...||-|+||.|..+...++. ..+|.|.+++.+.- .++.....|-.||+.-+.+.||+||-.|++++..|+||
T Consensus 634 ik~iGvGAFGeV~Lv~KvDT~-----~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVM 708 (1034)
T KOG0608|consen 634 IKTIGVGAFGEVCLVRKVDTR-----ALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM 708 (1034)
T ss_pred EeeecccccceeEEEeecchh-----hHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEE
Confidence 468999999999999988775 78999999876432 23356778999999999999999999999999999999
Q ss_pred eeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCC
Q 006522 425 DFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLP 504 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~ 504 (642)
||++|||+..+|.+.+. |.+.....++.++..|+++.|. .++|||||||+|||||.+|++||.||||+.-+.
T Consensus 709 dYIPGGDmMSLLIrmgI-----FeE~LARFYIAEltcAiesVHk---mGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfR 780 (1034)
T KOG0608|consen 709 DYIPGGDMMSLLIRMGI-----FEEDLARFYIAELTCAIESVHK---MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFR 780 (1034)
T ss_pred eccCCccHHHHHHHhcc-----CHHHHHHHHHHHHHHHHHHHHh---ccceecccCccceEEccCCceeeeeccccccce
Confidence 99999999999987653 8888888899999999999999 899999999999999999999999999986542
Q ss_pred CC--C-ccccccee---------------------------eecCCCcccccCCCcccCccccccCCCCCcccchHHHHH
Q 006522 505 GT--S-KVTKNETI---------------------------VTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGI 554 (642)
Q Consensus 505 ~~--~-~~~~~~~~---------------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gv 554 (642)
-+ . ++...... .+........+||+.|+|||++.. ..++..+|.||.||
T Consensus 781 WTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r-~g~~q~cdwws~gv 859 (1034)
T KOG0608|consen 781 WTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLAR-TGYTQLCDWWSVGV 859 (1034)
T ss_pred eccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcc-cCccccchhhHhhH
Confidence 11 1 11100000 001111135689999999999665 78999999999999
Q ss_pred HHHHHHhCCCCCCCCCCC
Q 006522 555 VLLEILTGRLPDAGPEND 572 (642)
Q Consensus 555 vl~el~tG~~P~~~~~~~ 572 (642)
|||||+.|+.||......
T Consensus 860 il~em~~g~~pf~~~tp~ 877 (1034)
T KOG0608|consen 860 ILYEMLVGQPPFLADTPG 877 (1034)
T ss_pred HHHHHhhCCCCccCCCCC
Confidence 999999999999765443
No 388
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.97 E-value=1.9e-30 Score=256.55 Aligned_cols=240 Identities=24% Similarity=0.376 Sum_probs=189.5
Q ss_pred CCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEeeccCCcHH
Q 006522 354 KNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLY 433 (642)
Q Consensus 354 ~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL~ 433 (642)
+||.||++.....+ +.+++|++.........+.+.+|++.+++++|+||+++++++......++++||+++++|.
T Consensus 1 ~~g~v~~~~~~~~~-----~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~ 75 (244)
T smart00220 1 SFGKVYLARDKKTG-----KLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLF 75 (244)
T ss_pred CceEEEEEEECCCC-----cEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHH
Confidence 58999999997743 7899999976543322488999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCCCcccccc
Q 006522 434 AALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNE 513 (642)
Q Consensus 434 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 513 (642)
+++.... .+++..+..++.+++.+++|||+ .+++|+||+|+||++++++.++++|||.+.......
T Consensus 76 ~~~~~~~-----~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~------ 141 (244)
T smart00220 76 DLLKKRG-----RLSEDEARFYARQILSALEYLHS---NGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG------ 141 (244)
T ss_pred HHHHhcc-----CCCHHHHHHHHHHHHHHHHHHHH---cCeecCCcCHHHeEECCCCcEEEccccceeeecccc------
Confidence 9987643 28899999999999999999999 799999999999999999999999999988764331
Q ss_pred eeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHhccCCCccc
Q 006522 514 TIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEV 593 (642)
Q Consensus 514 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 593 (642)
......++..|++||... +..++.++||||+|+++|+|++|..||.... ......+............
T Consensus 142 -------~~~~~~~~~~~~~pE~~~-~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~----~~~~~~~~~~~~~~~~~~~ 209 (244)
T smart00220 142 -------LLTTFVGTPEYMAPEVLL-GKGYGKAVDVWSLGVILYELLTGKPPFPGDD----QLLELFKKIGKPKPPFPPP 209 (244)
T ss_pred -------ccccccCCcCCCCHHHHc-cCCCCchhhHHHHHHHHHHHHhCCCCCCCCC----cHHHHHHHHhccCCCCccc
Confidence 111334667799999854 4678889999999999999999999986421 1222233222222111100
Q ss_pred cChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 594 IDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 594 ~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
... ...++.+++.+|+..+|++||++.++++
T Consensus 210 -~~~---------~~~~~~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 210 -EWK---------ISPEAKDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred -ccc---------CCHHHHHHHHHHccCCchhccCHHHHhh
Confidence 000 1135667899999999999999999986
No 389
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.1e-32 Score=273.78 Aligned_cols=238 Identities=18% Similarity=0.214 Sum_probs=191.3
Q ss_pred cccCccCCceeEEEEecCCCCCCCCeEEEEEEecCC--CccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEe
Q 006522 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG--DATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 348 ~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
..||-|+||.|-.+...... ..+|+|.+++. -+..+.+.+..|-.||...+.|.||++|..|.+....|++||
T Consensus 426 aTLGvGgFGRVELV~~~~~~-----~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmE 500 (732)
T KOG0614|consen 426 ATLGVGGFGRVELVKVNSQK-----ATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLME 500 (732)
T ss_pred hhcccCccceEEEEEecccc-----hHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHH
Confidence 56899999999999887763 35888888775 234455788899999999999999999999999999999999
Q ss_pred eccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCC
Q 006522 426 FIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPG 505 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 505 (642)
-|-||.|...|++++. |+..+...++..+.+|++|||+ .+||.|||||+|.++|.+|-+||.|||+|+.+..
T Consensus 501 aClGGElWTiLrdRg~-----Fdd~tarF~~acv~EAfeYLH~---k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~ 572 (732)
T KOG0614|consen 501 ACLGGELWTILRDRGS-----FDDYTARFYVACVLEAFEYLHR---KGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGS 572 (732)
T ss_pred hhcCchhhhhhhhcCC-----cccchhhhhHHHHHHHHHHHHh---cCceeccCChhheeeccCCceEEeehhhHHHhcc
Confidence 9999999999998765 7788888999999999999999 8999999999999999999999999999998765
Q ss_pred CCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHh
Q 006522 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR 585 (642)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~ 585 (642)
... +-+.+||+.|.|||+++. ...+.++|.||+|+++|||+||.+||.+.+. -..+..+++..-
T Consensus 573 g~K-------------TwTFcGTpEYVAPEIILn-KGHD~avDyWaLGIli~ELL~G~pPFs~~dp-mktYn~ILkGid- 636 (732)
T KOG0614|consen 573 GRK-------------TWTFCGTPEYVAPEIILN-KGHDRAVDYWALGILIYELLTGSPPFSGVDP-MKTYNLILKGID- 636 (732)
T ss_pred CCc-------------eeeecCCcccccchhhhc-cCcchhhHHHHHHHHHHHHHcCCCCCCCCch-HHHHHHHHhhhh-
Confidence 432 225789999999999776 7789999999999999999999999986432 111111111111
Q ss_pred ccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCC
Q 006522 586 ERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPR 628 (642)
Q Consensus 586 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs 628 (642)
...++..+ .....+++.+.+..+|.+|.-
T Consensus 637 -~i~~Pr~I-------------~k~a~~Lik~LCr~~P~ERLG 665 (732)
T KOG0614|consen 637 -KIEFPRRI-------------TKTATDLIKKLCRDNPTERLG 665 (732)
T ss_pred -hhhccccc-------------chhHHHHHHHHHhcCcHhhhc
Confidence 01111111 123456777788889999865
No 390
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.97 E-value=1.8e-30 Score=277.67 Aligned_cols=263 Identities=15% Similarity=0.142 Sum_probs=174.2
Q ss_pred cccccCccCCceeEEEEecCCCC-----------CCCCeEEEEEEecCCCccc-------------cHHHHHHHHHHHhc
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSG-----------MGAPTVVAVRRLTEGDATW-------------RFKDFESEVEAIAR 401 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~-----------~~~~~~vavK~~~~~~~~~-------------~~~~~~~E~~~l~~ 401 (642)
..+.||+|+||.||+|....... ....+.||||++....... ..+.+..|+.++.+
T Consensus 149 i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~~~l~~ 228 (507)
T PLN03224 149 LRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEAYMCAK 228 (507)
T ss_pred EeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHHHHHHH
Confidence 35789999999999997633211 1122679999986532211 01234457788888
Q ss_pred ccCCCe-----eeEEEEEEe--------CCceEEEEeeccCCcHHHHHhcCCCC-------------------CCCCCCH
Q 006522 402 VQHPNI-----VRLKAFYYA--------NDEKLLISDFIRNGSLYAALHAGPSD-------------------SLPPLPW 449 (642)
Q Consensus 402 l~H~nI-----v~l~~~~~~--------~~~~~lv~e~~~~gsL~~~l~~~~~~-------------------~~~~l~~ 449 (642)
++|.++ +++++||.. .+..++||||+++|+|.++++..... ....++|
T Consensus 229 l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~ 308 (507)
T PLN03224 229 IKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDI 308 (507)
T ss_pred hhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCH
Confidence 877654 677888754 35689999999999999999753210 0123578
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCCCcccccceeeecCCCcccccCCC
Q 006522 450 EARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISN 529 (642)
Q Consensus 450 ~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 529 (642)
..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++........ ......+|+
T Consensus 309 ~~~~~i~~ql~~aL~~lH~---~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~-----------~~~~g~~tp 374 (507)
T PLN03224 309 NVIKGVMRQVLTGLRKLHR---IGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINF-----------NPLYGMLDP 374 (507)
T ss_pred HHHHHHHHHHHHHHHHHHH---CCeecCCCchHhEEECCCCcEEEEeCcCccccccCCcc-----------CccccCCCc
Confidence 8899999999999999999 89999999999999999999999999999765322110 001223477
Q ss_pred cccCccccccCC---------------------CCCcccchHHHHHHHHHHHhCCC-CCCCCCCCc-------ccHHHHH
Q 006522 530 VYLAPEARIYGS---------------------KFTQKCDVYSFGIVLLEILTGRL-PDAGPENDG-------KGLESLV 580 (642)
Q Consensus 530 ~y~aPE~~~~~~---------------------~~~~~sDV~S~Gvvl~el~tG~~-P~~~~~~~~-------~~l~~~~ 580 (642)
.|+|||.+.... ....+.||||+||++|||++|.. |+.....-. .++..|.
T Consensus 375 ~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r 454 (507)
T PLN03224 375 RYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWR 454 (507)
T ss_pred ceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHH
Confidence 899999854321 11235799999999999999875 664321110 1111111
Q ss_pred HHHHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCC---CCCCCHHHHHH
Q 006522 581 RKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDP---EFRPRMRTVSE 634 (642)
Q Consensus 581 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP---~~RPs~~ev~~ 634 (642)
....... +-...+. ......+++.+++..+| .+|+|+.|+++
T Consensus 455 -~~~~~~~------~~~~~d~-----~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~ 499 (507)
T PLN03224 455 -MYKGQKY------DFSLLDR-----NKEAGWDLACKLITKRDQANRGRLSVGQALS 499 (507)
T ss_pred -hhcccCC------Ccccccc-----cChHHHHHHHHHhccCCCCcccCCCHHHHhC
Confidence 1111111 1111111 11234567778888765 68999999875
No 391
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1e-30 Score=249.24 Aligned_cols=243 Identities=18% Similarity=0.315 Sum_probs=190.6
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCC--CccccHHHHHHHHHHHhcc-cCCCeeeEEEEEEeCCceEE
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG--DATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLL 422 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~l 422 (642)
.-.+||+|+|..|..+++.++. +.+|+|++++. .+.+.+.-...|-.+..+- +||.+|.++.+|+.....++
T Consensus 254 ll~vigrgsyakvl~~~~~~t~-----qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff 328 (593)
T KOG0695|consen 254 LLRVIGRGSYAKVLLVRLKKTD-----QIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF 328 (593)
T ss_pred eeeeecCcchhhhhheehcccc-----eeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence 3578999999999999998886 89999999876 2333345566788777766 89999999999999999999
Q ss_pred EEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEeccccccc
Q 006522 423 ISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRL 502 (642)
Q Consensus 423 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 502 (642)
|.||++||+|.-++++.+ .|+++....+..+|..||.|||+ ++||.||||.+|||+|..|++|+.|+|+++.
T Consensus 329 vieyv~ggdlmfhmqrqr-----klpeeharfys~ei~lal~flh~---rgiiyrdlkldnvlldaeghikltdygmcke 400 (593)
T KOG0695|consen 329 VIEYVNGGDLMFHMQRQR-----KLPEEHARFYSAEICLALNFLHE---RGIIYRDLKLDNVLLDAEGHIKLTDYGMCKE 400 (593)
T ss_pred EEEEecCcceeeehhhhh-----cCcHHHhhhhhHHHHHHHHHHhh---cCeeeeeccccceEEccCCceeecccchhhc
Confidence 999999999987776654 39999999999999999999999 8999999999999999999999999999986
Q ss_pred CCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCC--CCCCcccHHHHH
Q 006522 503 LPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAG--PENDGKGLESLV 580 (642)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~--~~~~~~~l~~~~ 580 (642)
--.. +-.+.+.+||+.|+|||+ +.+..|+...|.|++||+++||+.|+.||+- +.+.+.+...++
T Consensus 401 ~l~~------------gd~tstfcgtpnyiapei-lrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedyl 467 (593)
T KOG0695|consen 401 GLGP------------GDTTSTFCGTPNYIAPEI-LRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYL 467 (593)
T ss_pred CCCC------------CcccccccCCCcccchhh-hcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHH
Confidence 4322 112236799999999998 5568999999999999999999999999973 333344444444
Q ss_pred HHHHhc-cCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCC
Q 006522 581 RKAFRE-RRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRP 627 (642)
Q Consensus 581 ~~~~~~-~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP 627 (642)
-+..-+ ...++..++- +...+...-++.||.+|.
T Consensus 468 fqvilekqiriprslsv-------------kas~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 468 FQVILEKQIRIPRSLSV-------------KASHVLKGFLNKDPKERL 502 (593)
T ss_pred HHHHhhhcccccceeeh-------------hhHHHHHHhhcCCcHHhc
Confidence 333322 2222222221 222344557888998884
No 392
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.97 E-value=1.7e-30 Score=235.77 Aligned_cols=253 Identities=14% Similarity=0.196 Sum_probs=194.9
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhccc-CCCeeeEEEEEEeCC--ceEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ-HPNIVRLKAFYYAND--EKLLI 423 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~--~~~lv 423 (642)
.+.+|+|.++.||.|...... ..++||.++.... +.+.+|+.||..++ |||||++++...+.. ...||
T Consensus 43 vrk~GRGKYSEVFeg~~~~~~-----eK~ViKiLKPVkk----kKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLi 113 (338)
T KOG0668|consen 43 VRKVGRGKYSEVFEGINITNN-----EKCVIKILKPVKK----KKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLI 113 (338)
T ss_pred HHHHcCccHhhHhcccccCCC-----ceEEEeeechHHH----HHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhH
Confidence 357899999999999876665 7899999986432 67889999999996 999999999998765 46799
Q ss_pred EeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCC-CCCeEEeccccccc
Q 006522 424 SDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDD-ELHPCISGFGLNRL 502 (642)
Q Consensus 424 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~-~~~~kl~DfGla~~ 502 (642)
+||+.+-+...+.. .|+-..+..++.|+++||.|+|+ .||+|||+||.|+++|. .-..+++|+|+|..
T Consensus 114 FE~v~n~Dfk~ly~--------tl~d~dIryY~~elLkALdyCHS---~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEF 182 (338)
T KOG0668|consen 114 FEYVNNTDFKQLYP--------TLTDYDIRYYIYELLKALDYCHS---MGIMHRDVKPHNVMIDHELRKLRLIDWGLAEF 182 (338)
T ss_pred hhhhccccHHHHhh--------hhchhhHHHHHHHHHHHHhHHHh---cCcccccCCcceeeechhhceeeeeecchHhh
Confidence 99999987766553 26667888999999999999999 89999999999999995 56799999999988
Q ss_pred CCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHH
Q 006522 503 LPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRK 582 (642)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~ 582 (642)
+..... ....+.+..|.-||.+..-+.|+..-|+|||||++.+|+..+.||.........+..+++.
T Consensus 183 YHp~~e-------------YnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakV 249 (338)
T KOG0668|consen 183 YHPGKE-------------YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKV 249 (338)
T ss_pred cCCCce-------------eeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHH
Confidence 754422 2234556678999987776789999999999999999999999998655555555544432
Q ss_pred HHh-------ccCCCccccChhhhhch------------hHHH---HHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 583 AFR-------ERRPLSEVIDPALVKEI------------HAKR---QVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 583 ~~~-------~~~~~~~~~d~~l~~~~------------~~~~---~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
.-. ... .-.+||++.+.+ .... ..-++++++-+.+..|.++|||++|++.
T Consensus 250 LGt~el~~Yl~KY--~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~ 321 (338)
T KOG0668|consen 250 LGTDELYAYLNKY--QIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA 321 (338)
T ss_pred hChHHHHHHHHHH--ccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence 110 011 111344433211 1110 1246788999999999999999999874
No 393
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.97 E-value=6.1e-31 Score=278.56 Aligned_cols=246 Identities=23% Similarity=0.294 Sum_probs=183.3
Q ss_pred cccccCccCCc-eeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcc-cCCCeeeEEEEEEeCCceEEE
Q 006522 346 SAYVVGKSKNG-IMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLI 423 (642)
Q Consensus 346 ~~~~lg~g~~g-~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv 423 (642)
..+++|.|+.| .||+|...+ +.||||++-.... .-..+||..|..- +|||||++++.-+++...|+.
T Consensus 513 ~~eilG~Gs~Gt~Vf~G~ye~-------R~VAVKrll~e~~----~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIa 581 (903)
T KOG1027|consen 513 PKEILGYGSNGTVVFRGVYEG-------REVAVKRLLEEFF----DFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIA 581 (903)
T ss_pred cHHHcccCCCCcEEEEEeeCC-------ceehHHHHhhHhH----HHHHHHHHHHHhccCCCceEEEEeeccCCceEEEE
Confidence 45789999887 679998776 7999999865321 3457899999888 799999999998888999999
Q ss_pred EeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCC-----CCCeEEeccc
Q 006522 424 SDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDD-----ELHPCISGFG 498 (642)
Q Consensus 424 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~-----~~~~kl~DfG 498 (642)
.|.|.. +|.+++....... ....-...+.+..|+++||+|||+ .+||||||||.||||+. ..+++|+|||
T Consensus 582 lELC~~-sL~dlie~~~~d~-~~~~~i~~~~~l~q~~~GlaHLHs---l~iVHRDLkPQNILI~~~~~~~~~ra~iSDfg 656 (903)
T KOG1027|consen 582 LELCAC-SLQDLIESSGLDV-EMQSDIDPISVLSQIASGLAHLHS---LKIVHRDLKPQNILISVPSADGTLRAKISDFG 656 (903)
T ss_pred ehHhhh-hHHHHHhccccch-hhcccccHHHHHHHHHHHHHHHHh---cccccccCCCceEEEEccCCCcceeEEecccc
Confidence 999977 9999998752111 111113446788999999999999 79999999999999964 3679999999
Q ss_pred ccccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhC-CCCCCCCCCCcccHH
Q 006522 499 LNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTG-RLPDAGPENDGKGLE 577 (642)
Q Consensus 499 la~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG-~~P~~~~~~~~~~l~ 577 (642)
+++.+..+..... ......||.+|+|||++.. ..-+.++||+|+|||+|+.+|| ..||.+.....
T Consensus 657 lsKkl~~~~sS~~---------r~s~~sGt~GW~APE~L~~-~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~---- 722 (903)
T KOG1027|consen 657 LSKKLAGGKSSFS---------RLSGGSGTSGWQAPEQLRE-DRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQ---- 722 (903)
T ss_pred cccccCCCcchhh---------cccCCCCcccccCHHHHhc-cccCcccchhhcCceEEEEecCCccCCCchHHhh----
Confidence 9998876532111 1225678999999999554 5667799999999999999995 99996532211
Q ss_pred HHHHHHHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 578 SLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 578 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
. .+......+... .+ ..++ ++.+|+-++++++|..||++.+|+.
T Consensus 723 --~-NIl~~~~~L~~L-~~-------~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 723 --A-NILTGNYTLVHL-EP-------LPDC--EAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred --h-hhhcCccceeee-cc-------CchH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence 1 112222221111 00 0111 5567889999999999999999874
No 394
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=3.1e-31 Score=246.29 Aligned_cols=261 Identities=17% Similarity=0.266 Sum_probs=188.9
Q ss_pred cccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCc-cccHHHHHHHHHHHhcccCCCeeeEEEEEEeCC-----ceE
Q 006522 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA-TWRFKDFESEVEAIARVQHPNIVRLKAFYYAND-----EKL 421 (642)
Q Consensus 348 ~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~-----~~~ 421 (642)
+-||-|+||+||.+.+..++ +.||+|++..... -...+.+.+|+++|..++|.||...++..+-.. ++|
T Consensus 59 RPIGYGAFGVVWsVTDPRdg-----rrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiY 133 (449)
T KOG0664|consen 59 RPIGYGAFGVVWSVTDPRSG-----KRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELY 133 (449)
T ss_pred CcccccceeEEEeccCCCCc-----cchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHH
Confidence 56899999999999998876 8899999876421 122378899999999999999999999887643 578
Q ss_pred EEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccc
Q 006522 422 LISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNR 501 (642)
Q Consensus 422 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 501 (642)
.|.|.|.. +|...+-.- .+++-..+.-+..||++||.|||+ .+|.||||||.|.|++.+...||||||+++
T Consensus 134 V~TELmQS-DLHKIIVSP-----Q~Ls~DHvKVFlYQILRGLKYLHs---A~ILHRDIKPGNLLVNSNCvLKICDFGLAR 204 (449)
T KOG0664|consen 134 VLTELMQS-DLHKIIVSP-----QALTPDHVKVFVYQILRGLKYLHT---ANILHRDIKPGNLLVNSNCILKICDFGLAR 204 (449)
T ss_pred HHHHHHHh-hhhheeccC-----CCCCcchhhhhHHHHHhhhHHHhh---cchhhccCCCccEEeccCceEEeccccccc
Confidence 89998865 887777542 358888888899999999999999 899999999999999999999999999998
Q ss_pred cCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHH
Q 006522 502 LLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVR 581 (642)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~ 581 (642)
.-..+.... .+..+.|.+|+|||++.+.+.|+.+.||||.|||+.||+.++.-|.....- . -.+.+.
T Consensus 205 vee~d~~~h-----------MTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~Pi-q-QL~lIt 271 (449)
T KOG0664|consen 205 TWDQRDRLN-----------MTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPI-E-QLQMII 271 (449)
T ss_pred ccchhhhhh-----------hHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChH-H-HHHHHH
Confidence 755442211 112345678999999888788999999999999999999988877643211 0 011111
Q ss_pred HHH------------hc------cCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 006522 582 KAF------------RE------RRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSES 635 (642)
Q Consensus 582 ~~~------------~~------~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~ 635 (642)
..+ .+ +.+....--+.+.........-.+.+.+.+..+..||++|.+..+.+..
T Consensus 272 dLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~ 343 (449)
T KOG0664|consen 272 DLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQH 343 (449)
T ss_pred HHhCCCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccc
Confidence 100 00 0000000001111111111223445667788899999999998887653
No 395
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.96 E-value=1.3e-28 Score=234.62 Aligned_cols=189 Identities=20% Similarity=0.293 Sum_probs=150.9
Q ss_pred ccCccCCceeEEEEecCCCCCCCCeEEEEEEecCC-CccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCC------ceE
Q 006522 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG-DATWRFKDFESEVEAIARVQHPNIVRLKAFYYAND------EKL 421 (642)
Q Consensus 349 ~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~------~~~ 421 (642)
.+|.|.- .|-.+.+.-.. +.||+|++... ......++..+|...+..+.|+||++++.+|.-.. +.|
T Consensus 24 p~~~g~~-~v~~a~D~v~~-----~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y 97 (369)
T KOG0665|consen 24 PIGSGAQ-IVVAAFDQVLG-----RPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVY 97 (369)
T ss_pred ccCCCCc-eEEecchhhcc-----CceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHH
Confidence 4555555 34444443332 78999987654 22222377789999999999999999999987543 579
Q ss_pred EEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccc
Q 006522 422 LISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNR 501 (642)
Q Consensus 422 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 501 (642)
+|||||.. +|.+.++- .++.++..+|..|++.|+.|||+ .+|+||||||+||++..+..+||.|||+|+
T Consensus 98 ~v~e~m~~-nl~~vi~~-------elDH~tis~i~yq~~~~ik~lhs---~~IihRdLkPsnivv~~~~~lKi~dfg~ar 166 (369)
T KOG0665|consen 98 LVMELMDA-NLCQVILM-------ELDHETISYILYQMLCGIKHLHS---AGIIHRDLKPSNIVVNSDCTLKILDFGLAR 166 (369)
T ss_pred HHHHhhhh-HHHHHHHH-------hcchHHHHHHHHHHHHHHHHHHh---cceeecccCcccceecchhheeeccchhhc
Confidence 99999965 99999872 27788999999999999999999 899999999999999999999999999997
Q ss_pred cCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCC
Q 006522 502 LLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAG 568 (642)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~ 568 (642)
....+ ..-+..+.|..|.|||++.+ ..+.+.+||||.||++.||++|+.-|.+
T Consensus 167 ~e~~~-------------~~mtpyVvtRyyrapevil~-~~~ke~vdiwSvGci~gEli~~~Vlf~g 219 (369)
T KOG0665|consen 167 TEDTD-------------FMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGELILGTVLFPG 219 (369)
T ss_pred ccCcc-------------cccCchhheeeccCchheec-cCCcccchhhhhhhHHHHHhhceEEecC
Confidence 54322 01124567788999999776 4599999999999999999999988875
No 396
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.96 E-value=1.7e-27 Score=229.59 Aligned_cols=213 Identities=25% Similarity=0.440 Sum_probs=179.1
Q ss_pred cCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEeeccC
Q 006522 350 VGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRN 429 (642)
Q Consensus 350 lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 429 (642)
||+|.+|.||++....++ +.+++|.+.........+.+.+|++.+++++|++|+++++++......++++||+++
T Consensus 1 l~~g~~~~v~~~~~~~~~-----~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~ 75 (215)
T cd00180 1 LGEGGFGTVYLARDKKTG-----KKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEG 75 (215)
T ss_pred CCcCCceEEEEEEecCCC-----cEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCC
Confidence 689999999999997643 889999998654321347799999999999999999999999999999999999999
Q ss_pred CcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCC-CCCeEEecccccccCCCCCc
Q 006522 430 GSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDD-ELHPCISGFGLNRLLPGTSK 508 (642)
Q Consensus 430 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~-~~~~kl~DfGla~~~~~~~~ 508 (642)
++|.+++.... ..+++..+..++.+++++++|||+ .+++|+||+|.||+++. ++.++|+|||.+........
T Consensus 76 ~~l~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lh~---~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~ 148 (215)
T cd00180 76 GSLKDLLKENE----GKLSEDEILRILLQILEGLEYLHS---NGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS 148 (215)
T ss_pred CcHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc
Confidence 99999997653 248899999999999999999999 79999999999999999 89999999999876543311
Q ss_pred ccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHhccC
Q 006522 509 VTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERR 588 (642)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~~~~ 588 (642)
......+...|++||........+.++|+|++|+++++|
T Consensus 149 ------------~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l----------------------------- 187 (215)
T cd00180 149 ------------LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL----------------------------- 187 (215)
T ss_pred ------------hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH-----------------------------
Confidence 011234566799999854422778999999999999999
Q ss_pred CCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 006522 589 PLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSES 635 (642)
Q Consensus 589 ~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~ 635 (642)
..+.+++..|++.+|++||++.++++.
T Consensus 188 --------------------~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 188 --------------------PELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred --------------------HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 244567888999999999999999864
No 397
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.96 E-value=3.3e-29 Score=254.67 Aligned_cols=195 Identities=19% Similarity=0.282 Sum_probs=165.7
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC---ccc----cHHHHHHHHHHHhccc---CCCeeeEEEEEEe
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD---ATW----RFKDFESEVEAIARVQ---HPNIVRLKAFYYA 416 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~----~~~~~~~E~~~l~~l~---H~nIv~l~~~~~~ 416 (642)
-..+|+|+||.|+.+.++... ..|+||.+.+.. +.+ ..-.+-.||+||..++ |+||++++++|++
T Consensus 566 lq~lG~GAyGkV~lai~K~n~-----~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd 640 (772)
T KOG1152|consen 566 LQPLGEGAYGKVNLAIHKENN-----YEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED 640 (772)
T ss_pred eeeccccccceEEEeeecccc-----eEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence 468999999999999998875 899999998752 111 1123557999999997 9999999999999
Q ss_pred CCceEEEEee-ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEe
Q 006522 417 NDEKLLISDF-IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCIS 495 (642)
Q Consensus 417 ~~~~~lv~e~-~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~ 495 (642)
++..||+||- -++-+|++++..+.+ +++.....|++||+.|+++||+ ++|||||||-+||.+|.+|-+||+
T Consensus 641 dd~yyl~te~hg~gIDLFd~IE~kp~-----m~E~eAk~IFkQV~agi~hlh~---~~ivhrdikdenvivd~~g~~kli 712 (772)
T KOG1152|consen 641 DDYYYLETEVHGEGIDLFDFIEFKPR-----MDEPEAKLIFKQVVAGIKHLHD---QGIVHRDIKDENVIVDSNGFVKLI 712 (772)
T ss_pred CCeeEEEecCCCCCcchhhhhhccCc-----cchHHHHHHHHHHHhccccccc---cCceecccccccEEEecCCeEEEe
Confidence 9999999995 467799999987653 8999999999999999999999 899999999999999999999999
Q ss_pred cccccccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCC
Q 006522 496 GFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAG 568 (642)
Q Consensus 496 DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~ 568 (642)
|||.+...... .....+||..|.|||++.+....+..-|||++|++||.++....||..
T Consensus 713 dfgsaa~~ksg--------------pfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn 771 (772)
T KOG1152|consen 713 DFGSAAYTKSG--------------PFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN 771 (772)
T ss_pred eccchhhhcCC--------------CcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence 99988654322 223568999999999965545557888999999999999999999863
No 398
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=3.7e-27 Score=235.83 Aligned_cols=127 Identities=16% Similarity=0.272 Sum_probs=109.2
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhccc-----CC---CeeeEEEEEEeC-
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ-----HP---NIVRLKAFYYAN- 417 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-----H~---nIv~l~~~~~~~- 417 (642)
...||.|-|++||.+++..+. +.||+|+.+.... ..+..+.||++|++++ |+ +||+|+++|...
T Consensus 83 ~rKLGWGHFSTVWLawDtq~~-----r~VAlKVvKSAqh--YtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsG 155 (590)
T KOG1290|consen 83 QRKLGWGHFSTVWLAWDTQNK-----RYVALKVVKSAQH--YTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSG 155 (590)
T ss_pred EEeccccccceeEEEeeccCC-----eEEEEEEEehhhH--HHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecC
Confidence 367999999999999999886 8999999986432 3377889999999993 33 599999999864
Q ss_pred ---CceEEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeee
Q 006522 418 ---DEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILL 486 (642)
Q Consensus 418 ---~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl 486 (642)
.+.+||+|++ |-+|..+|...... .++...+..|++||+.||.|||+.| +|||-||||+|||+
T Consensus 156 pNG~HVCMVfEvL-GdnLLklI~~s~Yr---Glpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl 221 (590)
T KOG1290|consen 156 PNGQHVCMVFEVL-GDNLLKLIKYSNYR---GLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLL 221 (590)
T ss_pred CCCcEEEEEehhh-hhHHHHHHHHhCCC---CCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeee
Confidence 4789999998 55999999877654 4888999999999999999999985 89999999999998
No 399
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.95 E-value=4e-28 Score=240.03 Aligned_cols=272 Identities=19% Similarity=0.264 Sum_probs=198.6
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcc-cCCCeeeEEEEEEeCCceEEEEe
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
.+.||+|.|++||++.+... ......||+|.+...... .++.+|+++|..+ .+.||+++.+++..+++..+|+|
T Consensus 41 v~kigeGsFssv~~a~~~~~--~~~~~~valk~i~~ts~p---~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivlp 115 (418)
T KOG1167|consen 41 VNKIGEGSFSSVYKATDIEQ--DTKRRYVALKAIYRTSSP---SRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIVLP 115 (418)
T ss_pred hccccccchhhhhhhhHhhh--ccccceEeeeecccccCc---hHHHHHHHHHHHhccchhhhcchhhhccCCeeEEEec
Confidence 47899999999999998772 122389999999876554 6688999999999 69999999999999999999999
Q ss_pred eccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCC-CCCeEEecccccccCC
Q 006522 426 FIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDD-ELHPCISGFGLNRLLP 504 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~-~~~~kl~DfGla~~~~ 504 (642)
|++.-+..+++.. ++...+..+++.+..||+|+|. ++||||||||+|+|.+. -+.-.|.|||+|....
T Consensus 116 ~~~H~~f~~l~~~--------l~~~~i~~Yl~~ll~Al~~~h~---~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d 184 (418)
T KOG1167|consen 116 YFEHDRFRDLYRS--------LSLAEIRWYLRNLLKALAHLHK---NGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYD 184 (418)
T ss_pred ccCccCHHHHHhc--------CCHHHHHHHHHHHHHHhhhhhc---cCccccCCCccccccccccCCceEEechhHHHHH
Confidence 9999999988864 6678899999999999999999 89999999999999974 4677899999998321
Q ss_pred CCCc-----c-------c-------ccce----------e---eecCCCcccccCCCcccCccccccCCCCCcccchHHH
Q 006522 505 GTSK-----V-------T-------KNET----------I---VTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSF 552 (642)
Q Consensus 505 ~~~~-----~-------~-------~~~~----------~---~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~ 552 (642)
.... . . .... . ..........+||++|.|||++..-..-++++||||.
T Consensus 185 ~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~ 264 (418)
T KOG1167|consen 185 GYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSA 264 (418)
T ss_pred hhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeec
Confidence 1100 0 0 0000 0 0011111246799999999997766778999999999
Q ss_pred HHHHHHHHhCCCCCCCCCCCcccHHHHHH--------HHHh-ccC-CCcc---------------ccC-hhhhh------
Q 006522 553 GIVLLEILTGRLPDAGPENDGKGLESLVR--------KAFR-ERR-PLSE---------------VID-PALVK------ 600 (642)
Q Consensus 553 Gvvl~el~tG~~P~~~~~~~~~~l~~~~~--------~~~~-~~~-~~~~---------------~~d-~~l~~------ 600 (642)
|||++.+++++.||.....+...+.+++. +... .+. .+.+ .++ ..+..
T Consensus 265 GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~ 344 (418)
T KOG1167|consen 265 GVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNT 344 (418)
T ss_pred cceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccce
Confidence 99999999999999877666544444431 1100 000 0000 010 00000
Q ss_pred --chhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 601 --EIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 601 --~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
..........++++..+|+..||.+|.|++|.+.
T Consensus 345 ~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALk 380 (418)
T KOG1167|consen 345 EREIGSDVFPALLLDLLDKCLELNPQKRITAEDALK 380 (418)
T ss_pred eeccccccccHHHHHHHHHHccCChhhcccHHHHhc
Confidence 0000011236789999999999999999999874
No 400
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.95 E-value=5.2e-28 Score=224.97 Aligned_cols=249 Identities=19% Similarity=0.247 Sum_probs=184.4
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcc-cCCCeeeEEE-EEEeCCceEEE
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKA-FYYANDEKLLI 423 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~-~~~~~~~~~lv 423 (642)
....+|+|.||.+..+.++... +.+++|.+...... .++|.+|...--.| .|.||+.-|+ .|+..+..+++
T Consensus 28 I~k~lgeG~FgkIlL~eHr~s~-----t~ivlKavp~p~tt--~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~ 100 (378)
T KOG1345|consen 28 INKQLGEGRFGKILLAEHRQSK-----TRIVLKAVPRPQTT--QADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFV 100 (378)
T ss_pred HHHHhcccceeeEEeeeccCCc-----eEEEeeccCcchhh--HHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEe
Confidence 3568999999999999988876 89999998875443 38999999877666 6899997765 56777888899
Q ss_pred EeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeee--CCCCCeEEecccccc
Q 006522 424 SDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILL--DDELHPCISGFGLNR 501 (642)
Q Consensus 424 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl--~~~~~~kl~DfGla~ 501 (642)
+||++.|||.+-+...+ +-+....+++.|+++||.|||+ ..+||||||.+|||+ .+..++|+||||+.+
T Consensus 101 qE~aP~gdL~snv~~~G------igE~~~K~v~~ql~SAi~fMHs---knlVHRdlK~eNiLif~~df~rvKlcDFG~t~ 171 (378)
T KOG1345|consen 101 QEFAPRGDLRSNVEAAG------IGEANTKKVFAQLLSAIEFMHS---KNLVHRDLKAENILIFDADFYRVKLCDFGLTR 171 (378)
T ss_pred eccCccchhhhhcCccc------ccHHHHHHHHHHHHHHHHHhhc---cchhhcccccceEEEecCCccEEEeeeccccc
Confidence 99999999999887643 6778889999999999999999 899999999999999 245689999999987
Q ss_pred cCCCCCcccccceeeecCCCcccccCCCcccCcccccc----CCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHH
Q 006522 502 LLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIY----GSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLE 577 (642)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~ 577 (642)
........ ..-+..|-+||.... .-...+.+|||.||+++|.++||..||......+....
T Consensus 172 k~g~tV~~---------------~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~ 236 (378)
T KOG1345|consen 172 KVGTTVKY---------------LEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYW 236 (378)
T ss_pred ccCceehh---------------hhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHH
Confidence 65432111 111234889986332 12357899999999999999999999987666666677
Q ss_pred HHHHHHHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q 006522 578 SLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSES 635 (642)
Q Consensus 578 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~ 635 (642)
.|.+...+....+++.+.+- . .++.++-.+-+..+|++|=...++..+
T Consensus 237 ~~~~w~~rk~~~~P~~F~~f-----s-----~~a~r~Fkk~lt~~~~drcki~~~kk~ 284 (378)
T KOG1345|consen 237 EWEQWLKRKNPALPKKFNPF-----S-----EKALRLFKKSLTPRFKDRCKIWTAKKM 284 (378)
T ss_pred HHHHHhcccCccCchhhccc-----C-----HHHHHHHHHhcCCcccccchhHHHHHH
Confidence 77665544443333332221 1 122334445677788777444444433
No 401
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.95 E-value=1.3e-26 Score=226.47 Aligned_cols=199 Identities=25% Similarity=0.393 Sum_probs=168.0
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
...||+|++|.||++....++ +.+++|.+.........+.+.+|++.+.+++|+|++++++++......++++||
T Consensus 4 ~~~i~~g~~~~v~~~~~~~~~-----~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~ 78 (225)
T smart00221 4 GKKLGEGAFGKVYLARDKGTG-----ELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEY 78 (225)
T ss_pred eeEeecCCCeEEEEEEEcCCC-----cEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEec
Confidence 467899999999999998744 789999998653322347899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCC
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 506 (642)
+++++|.+++..... .+++.....++.+++.++.|||+ .+++|+|++|+||+++.++.++|+|||.+......
T Consensus 79 ~~~~~L~~~~~~~~~----~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~ 151 (225)
T smart00221 79 CEGGDLFDYLRKKGG----KLSEEEARFYLRQILEALEYLHS---LGIVHRDLKPENILLGMDGLVKLADFGLARFIHRD 151 (225)
T ss_pred cCCCCHHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCc
Confidence 999999999976542 17889999999999999999999 79999999999999999999999999998876433
Q ss_pred CcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCC
Q 006522 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAG 568 (642)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~ 568 (642)
.. .......++..|++||.......++.++||||||++++||++|+.||+.
T Consensus 152 ~~-----------~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 152 LA-----------ALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred cc-----------ccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 10 0011234566799999853446778899999999999999999999964
No 402
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.94 E-value=6.9e-28 Score=249.09 Aligned_cols=248 Identities=22% Similarity=0.326 Sum_probs=191.1
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
-..+|.|.+|.|||+++...+ +..|||.++-... ..+.-..+|+-+++..+|||||.++|.+...+..+++|||
T Consensus 20 lqrvgsgTygdvyKaRd~~s~-----elaavkvVkLep~-dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEy 93 (829)
T KOG0576|consen 20 LQRVGSGTYGDVYKARDKRSG-----ELAAVKVVKLEPG-DDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEY 93 (829)
T ss_pred eeeecCCcccchhhhcccccC-----chhhheeeeccCC-ccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEe
Confidence 357899999999999998876 7899999876432 2235667899999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCC
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 506 (642)
|.+|+|.+..+..+ ++++.++..++++..+||+|||+ .+-+|||||-.|||+.+.+.+|++|||.+..+...
T Consensus 94 cgggslQdiy~~Tg-----plselqiayvcRetl~gl~ylhs---~gk~hRdiKGanilltd~gDvklaDfgvsaqitat 165 (829)
T KOG0576|consen 94 CGGGSLQDIYHVTG-----PLSELQIAYVCRETLQGLKYLHS---QGKIHRDIKGANILLTDEGDVKLADFGVSAQITAT 165 (829)
T ss_pred cCCCcccceeeecc-----cchhHHHHHHHhhhhccchhhhc---CCcccccccccceeecccCceeecccCchhhhhhh
Confidence 99999999887643 69999999999999999999999 78899999999999999999999999998765432
Q ss_pred CcccccceeeecCCCcccccCCCcccCcccccc--CCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHH
Q 006522 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIY--GSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAF 584 (642)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~ 584 (642)
. ..+....||++|||||+..- .+.|+.++|||+.|+...|+---+.|..+- ..+......-
T Consensus 166 i------------~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdl----hpmr~l~LmT- 228 (829)
T KOG0576|consen 166 I------------AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDL----HPMRALFLMT- 228 (829)
T ss_pred h------------hhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCccccc----chHHHHHHhh-
Confidence 1 12235679999999997432 357899999999999999999888885421 1111111100
Q ss_pred hccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHH
Q 006522 585 RERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVS 633 (642)
Q Consensus 585 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~ 633 (642)
.... -.|.+.+. ......+-+++..|+-.+|++||+++.++
T Consensus 229 kS~~-----qpp~lkDk---~kws~~fh~fvK~altknpKkRptaeklL 269 (829)
T KOG0576|consen 229 KSGF-----QPPTLKDK---TKWSEFFHNFVKGALTKNPKKRPTAEKLL 269 (829)
T ss_pred ccCC-----CCCcccCC---ccchHHHHHHHHHHhcCCCccCCChhhhe
Confidence 1111 11222221 11223445678889999999999987654
No 403
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.94 E-value=5.3e-27 Score=270.63 Aligned_cols=207 Identities=14% Similarity=0.107 Sum_probs=137.4
Q ss_pred hcccC-CCeeeEEEEE-------EeCCceEEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC
Q 006522 400 ARVQH-PNIVRLKAFY-------YANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSP 471 (642)
Q Consensus 400 ~~l~H-~nIv~l~~~~-------~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~ 471 (642)
+.++| +||++++++| ...+..+.++||+ +++|+++|.... ..+++.+++.|+.||++||+|||+
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH~--- 98 (793)
T PLN00181 27 KSLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPD----RSVDAFECFHVFRQIVEIVNAAHS--- 98 (793)
T ss_pred chhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhccc----ccccHHHHHHHHHHHHHHHHHHHh---
Confidence 34456 6888898888 2334567888987 559999997532 249999999999999999999999
Q ss_pred CCceecCCCCCCeeeCCCC-------------------CeEEecccccccCCCCCcc--cccceeee--cCCCcccccCC
Q 006522 472 RKYVHGNIKSTKILLDDEL-------------------HPCISGFGLNRLLPGTSKV--TKNETIVT--SGTGSRISAIS 528 (642)
Q Consensus 472 ~~iiHrDlkp~NILl~~~~-------------------~~kl~DfGla~~~~~~~~~--~~~~~~~~--~~~~~~~~~gt 528 (642)
++|+||||||+||||+..+ .+|++|||+++........ ........ .........||
T Consensus 99 ~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt 178 (793)
T PLN00181 99 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEM 178 (793)
T ss_pred CCeeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCC
Confidence 8999999999999996544 4555555555432111000 00000000 00011124689
Q ss_pred CcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHhccCCCccccChhhhhchhHHHHH
Q 006522 529 NVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQV 608 (642)
Q Consensus 529 ~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 608 (642)
+.|||||++.. ..++.++|||||||+||||++|..|+.... .......... +.+.... ..
T Consensus 179 ~~Y~APE~~~~-~~~~~~sDVwSlGviL~ELl~~~~~~~~~~-------~~~~~~~~~~------~~~~~~~------~~ 238 (793)
T PLN00181 179 SWYTSPEEDNG-SSSNCASDVYRLGVLLFELFCPVSSREEKS-------RTMSSLRHRV------LPPQILL------NW 238 (793)
T ss_pred cceEChhhhcc-CCCCchhhhhhHHHHHHHHhhCCCchhhHH-------HHHHHHHHhh------cChhhhh------cC
Confidence 99999998554 778999999999999999999988864211 1111111111 1111100 11
Q ss_pred HHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 609 LATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 609 ~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
.+...++.+||+.+|.+||+|.|+++
T Consensus 239 ~~~~~~~~~~L~~~P~~Rps~~eil~ 264 (793)
T PLN00181 239 PKEASFCLWLLHPEPSCRPSMSELLQ 264 (793)
T ss_pred HHHHHHHHHhCCCChhhCcChHHHhh
Confidence 22346778899999999999999975
No 404
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.94 E-value=6e-26 Score=213.36 Aligned_cols=170 Identities=21% Similarity=0.204 Sum_probs=124.1
Q ss_pred CcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCCCcc
Q 006522 430 GSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKV 509 (642)
Q Consensus 430 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 509 (642)
|+|.++++..+. +++|.++..|+.||++||+|||+ .+ ||+||+++.++.+|+ ||+++.....
T Consensus 1 GsL~~~l~~~~~----~l~~~~~~~i~~qi~~~L~~lH~---~~------kp~Nil~~~~~~~~~--fG~~~~~~~~--- 62 (176)
T smart00750 1 VSLADILEVRGR----PLNEEEIWAVCLQCLRALRELHR---QA------KSGNILLTWDGLLKL--DGSVAFKTPE--- 62 (176)
T ss_pred CcHHHHHHHhCC----CCCHHHHHHHHHHHHHHHHHHHh---cC------CcccEeEcCccceee--ccceEeeccc---
Confidence 789999986432 49999999999999999999999 44 999999999999999 9998765322
Q ss_pred cccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHhccCC
Q 006522 510 TKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRP 589 (642)
Q Consensus 510 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~~~~~ 589 (642)
...||+.|||||++. +..++.++|||||||++|||+||+.||....... ...........+
T Consensus 63 --------------~~~g~~~y~aPE~~~-~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~----~~~~~~~~~~~~ 123 (176)
T smart00750 63 --------------QSRVDPYFMAPEVIQ-GQSYTEKADIYSLGITLYEALDYELPYNEERELS----AILEILLNGMPA 123 (176)
T ss_pred --------------cCCCcccccChHHhc-CCCCcchhhHHHHHHHHHHHHhCCCCccccchhc----HHHHHHHHHhcc
Confidence 125778899999955 4778999999999999999999999996533222 222222211111
Q ss_pred CccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhhh
Q 006522 590 LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVK 640 (642)
Q Consensus 590 ~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l~ 640 (642)
... .+... ........++.+++.+||+.+|++||++.|+++.+..+.
T Consensus 124 ~~~-~~~~~---~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~ 170 (176)
T smart00750 124 DDP-RDRSN---LESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALF 170 (176)
T ss_pred CCc-ccccc---HHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHH
Confidence 000 00000 000111125788999999999999999999999887663
No 405
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.93 E-value=6.2e-27 Score=235.28 Aligned_cols=271 Identities=18% Similarity=0.205 Sum_probs=200.1
Q ss_pred CccccHHHHHhhc---ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhccc------C
Q 006522 334 GFSLELEDLLRAS---AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ------H 404 (642)
Q Consensus 334 ~~~~~~~~~~~~~---~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~------H 404 (642)
.++..+.|++..- ....|+|-|++|.+|.+...+ ..||||++....... +.=++|++||++|+ -
T Consensus 421 YYrv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~-----~~vAiKIIRnNE~M~--KtGl~EleiLkKL~~AD~Edk 493 (752)
T KOG0670|consen 421 YYRVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARG-----QEVAIKIIRNNEVMH--KTGLKELEILKKLNDADPEDK 493 (752)
T ss_pred eEEEehhhhhcceeEEEeccccceeeeeeeccccCCC-----CeeEEEEeecchHHh--hhhhHHHHHHHHhhccCchhh
Confidence 3455666666543 345789999999999877654 699999998754322 55678999999995 3
Q ss_pred CCeeeEEEEEEeCCceEEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCe
Q 006522 405 PNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKI 484 (642)
Q Consensus 405 ~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NI 484 (642)
-|+++++..|...++.+||+|-+.- +|.++|...+.+. .|....+..++.|+.-||..|.. .+|+|.||||.||
T Consensus 494 ~Hclrl~r~F~hknHLClVFE~Lsl-NLRevLKKyG~nv--GL~ikaVRsYaqQLflALklLK~---c~vlHaDIKPDNi 567 (752)
T KOG0670|consen 494 FHCLRLFRHFKHKNHLCLVFEPLSL-NLREVLKKYGRNV--GLHIKAVRSYAQQLFLALKLLKK---CGVLHADIKPDNI 567 (752)
T ss_pred hHHHHHHHHhhhcceeEEEehhhhc-hHHHHHHHhCccc--ceeehHHHHHHHHHHHHHHHHHh---cCeeecccCccce
Confidence 4799999999999999999998855 9999998876653 48888999999999999999998 7999999999999
Q ss_pred eeCCC-CCeEEecccccccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCC
Q 006522 485 LLDDE-LHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGR 563 (642)
Q Consensus 485 Ll~~~-~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~ 563 (642)
|+++. ..+||||||.|..+....-. ....+..|.|||++++ ..|+...|+||.||+||||+||+
T Consensus 568 LVNE~k~iLKLCDfGSA~~~~eneit--------------PYLVSRFYRaPEIiLG-~~yd~~iD~WSvgctLYElYtGk 632 (752)
T KOG0670|consen 568 LVNESKNILKLCDFGSASFASENEIT--------------PYLVSRFYRAPEIILG-LPYDYPIDTWSVGCTLYELYTGK 632 (752)
T ss_pred EeccCcceeeeccCcccccccccccc--------------HHHHHHhccCcceeec-CcccCCccceeeceeeEEeeccc
Confidence 99864 56899999999876544210 1223456999999664 89999999999999999999999
Q ss_pred CCCCCCCCCcccHHHHHHHH--------HhccCCCccccChhh--------------------------------hhc--
Q 006522 564 LPDAGPENDGKGLESLVRKA--------FRERRPLSEVIDPAL--------------------------------VKE-- 601 (642)
Q Consensus 564 ~P~~~~~~~~~~l~~~~~~~--------~~~~~~~~~~~d~~l--------------------------------~~~-- 601 (642)
.-|.+..+.. +..+.... ++...-..+.+|..+ ...
T Consensus 633 IlFpG~TNN~--MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~ 710 (752)
T KOG0670|consen 633 ILFPGRTNNQ--MLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQR 710 (752)
T ss_pred eecCCCCcHH--HHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCC
Confidence 9998765532 22222111 111100111111111 110
Q ss_pred --hhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 602 --IHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 602 --~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
-.....+..+-+|.-.|+..||++|.|..+++.
T Consensus 711 ~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~ 745 (752)
T KOG0670|consen 711 LPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALK 745 (752)
T ss_pred CCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhc
Confidence 011235567788999999999999999998764
No 406
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.93 E-value=1.1e-26 Score=216.07 Aligned_cols=248 Identities=23% Similarity=0.324 Sum_probs=183.6
Q ss_pred cccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCcccc-HHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWR-FKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 348 ~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~-~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
..|.+...|..|+|++... .+++|++...+...+ -++|..|.-.|+-+.||||..++|.|..+....++..|
T Consensus 196 tkl~e~hsgelwrgrwqgn-------divakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~ 268 (448)
T KOG0195|consen 196 TKLAESHSGELWRGRWQGN-------DIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQY 268 (448)
T ss_pred hhhccCCCcccccccccCc-------chhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeee
Confidence 4566788899999988764 466677655433222 27899999999999999999999999999999999999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEe--cccccccCC
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCIS--GFGLNRLLP 504 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~--DfGla~~~~ 504 (642)
|+.|+|+..||+...- ..+..+.++++.+||+|++|||+.. +-|..--|.+..+++|++.+++|+ |--++.+..
T Consensus 269 mp~gslynvlhe~t~v---vvd~sqav~faldiargmaflhsle-p~ipr~~lns~hvmidedltarismad~kfsfqe~ 344 (448)
T KOG0195|consen 269 MPFGSLYNVLHEQTSV---VVDHSQAVRFALDIARGMAFLHSLE-PMIPRFYLNSKHVMIDEDLTARISMADTKFSFQEV 344 (448)
T ss_pred ccchHHHHHHhcCccE---EEecchHHHHHHHHHhhHHHHhhcc-hhhhhhhcccceEEecchhhhheecccceeeeecc
Confidence 9999999999987542 4677899999999999999999975 345556789999999999998875 322221110
Q ss_pred CCCcccccceeeecCCCcccccCCCcccCccccccCCC--CCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHH
Q 006522 505 GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSK--FTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRK 582 (642)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~--~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~ 582 (642)
...-++.||+||.+..... --.++|+|||.+++|||.|.+.||.+-..-+..+...++.
T Consensus 345 -------------------gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkialeg 405 (448)
T KOG0195|consen 345 -------------------GRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALEG 405 (448)
T ss_pred -------------------ccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhcc
Confidence 1123567999998654322 2358899999999999999999998654433222211111
Q ss_pred HHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhhhc
Q 006522 583 AFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRVKL 641 (642)
Q Consensus 583 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l~~ 641 (642)
+ +..++.-+++. +.+++.-|++.||.+||.+..|+-.||+++.
T Consensus 406 -l--rv~ippgis~h-------------m~klm~icmnedpgkrpkfdmivpilekm~~ 448 (448)
T KOG0195|consen 406 -L--RVHIPPGISRH-------------MNKLMNICMNEDPGKRPKFDMIVPILEKMIL 448 (448)
T ss_pred -c--cccCCCCccHH-------------HHHHHHHHhcCCCCcCCCcceehhhHHHhcC
Confidence 1 11233333333 3346666999999999999999999999863
No 407
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.91 E-value=5.5e-24 Score=252.43 Aligned_cols=181 Identities=34% Similarity=0.648 Sum_probs=125.7
Q ss_pred ccCCchHhHHHHHHHHHhcccCCCCCCCCCCCCCCCCCCceeeEecC-CCEeEEEcCCCCccccCCccccCCCCCCEEEc
Q 006522 18 LCFSLNQDGLALLALKAAIAQDPTRALDSWSESDSTPCHWSGIHCIR-NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSL 96 (642)
Q Consensus 18 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~w~~~~~~~c~w~gv~c~~-~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~L 96 (642)
.+.....|..||++||+++. +|.+.+.+|+.. .+||.|.||+|.. ++|+.|+|++|+++|.+|+.+..+++|+.|+|
T Consensus 23 ~~~~~~~~~~~l~~~~~~~~-~~~~~~~~w~~~-~~~c~w~gv~c~~~~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~L 100 (968)
T PLN00113 23 FSMLHAEELELLLSFKSSIN-DPLKYLSNWNSS-ADVCLWQGITCNNSSRVVSIDLSGKNISGKISSAIFRLPYIQTINL 100 (968)
T ss_pred ccCCCHHHHHHHHHHHHhCC-CCcccCCCCCCC-CCCCcCcceecCCCCcEEEEEecCCCccccCChHHhCCCCCCEEEC
Confidence 34446689999999999995 777788999754 5689999999974 68999999999999999999999999999999
Q ss_pred cCCCCCCccccccc-cCCccceeeccCCcccccCcccccCCCCcCeEecccccCCCcchhHhhhhccccceeeccccccc
Q 006522 97 ASNNFSKPIPANLF-NATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFS 175 (642)
Q Consensus 97 s~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~l~l~~N~l~ 175 (642)
++|+++|.+|..+. ++++|++|+|++|+++|.+|. ..+++|++|+|++|.+++.+|..+..+++|+ .|+|++|.+.
T Consensus 101 s~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~-~L~L~~n~l~ 177 (968)
T PLN00113 101 SNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIGSFSSLK-VLDLGGNVLV 177 (968)
T ss_pred CCCccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEECcCCcccccCChHHhcCCCCC-EEECccCccc
Confidence 99999988988766 777777777777776655553 2344444444444444444444444444444 4444444444
Q ss_pred ccCCcccCCCCCCcEEEeecCCCCCCcC
Q 006522 176 GQIPEMYGHFPVMVSLDLRNNNLSGEIP 203 (642)
Q Consensus 176 ~~~p~~~~~l~~L~~L~l~~N~l~~~~p 203 (642)
+.+|..++++++|++|+|++|.+++.+|
T Consensus 178 ~~~p~~~~~l~~L~~L~L~~n~l~~~~p 205 (968)
T PLN00113 178 GKIPNSLTNLTSLEFLTLASNQLVGQIP 205 (968)
T ss_pred ccCChhhhhCcCCCeeeccCCCCcCcCC
Confidence 4444444444444444444444444433
No 408
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.89 E-value=6.9e-23 Score=210.36 Aligned_cols=165 Identities=16% Similarity=0.132 Sum_probs=122.0
Q ss_pred cccccCccCCceeEEEEecC-CCCCCCCeEEEEEEecCCC----ccccHHHHHHHHHHHhcccCCCeee-EEEEEEeCCc
Q 006522 346 SAYVVGKSKNGIMYKVVVGR-GSGMGAPTVVAVRRLTEGD----ATWRFKDFESEVEAIARVQHPNIVR-LKAFYYANDE 419 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~-~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~H~nIv~-l~~~~~~~~~ 419 (642)
....||+|+||.||+|+... ++ ..||||++.... .....+.|.+|+++|++++|+|||+ +++ .+.
T Consensus 22 ~~~~IG~G~fg~Vy~a~~~~~~~-----~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~----~~~ 92 (365)
T PRK09188 22 ETAVLKRDVFSTVERGYFAGDPG-----TARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA----TGK 92 (365)
T ss_pred EccEEeecCcEEEEEEEEcCCCC-----eEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE----cCC
Confidence 35689999999999998765 32 678999875331 1222467999999999999999985 443 246
Q ss_pred eEEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCC-CCCCeeeCCCCCeEEeccc
Q 006522 420 KLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNI-KSTKILLDDELHPCISGFG 498 (642)
Q Consensus 420 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDl-kp~NILl~~~~~~kl~DfG 498 (642)
.++||||+++++|... .. .. ...++.|+++||+|||+ .+|+|||| ||+|||++.++.+||+|||
T Consensus 93 ~~LVmE~~~G~~L~~~-~~--------~~---~~~~~~~i~~aL~~lH~---~gIiHrDL~KP~NILv~~~~~ikLiDFG 157 (365)
T PRK09188 93 DGLVRGWTEGVPLHLA-RP--------HG---DPAWFRSAHRALRDLHR---AGITHNDLAKPQNWLMGPDGEAAVIDFQ 157 (365)
T ss_pred cEEEEEccCCCCHHHh-Cc--------cc---hHHHHHHHHHHHHHHHH---CCCeeCCCCCcceEEEcCCCCEEEEECc
Confidence 8999999999999732 11 10 14678999999999999 89999999 9999999999999999999
Q ss_pred ccccCCCCCcccccceeeecCCCcccccCCCcccCccccc
Q 006522 499 LNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARI 538 (642)
Q Consensus 499 la~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 538 (642)
+++.+.......... ....-+...+++.|+|||++.
T Consensus 158 lA~~~~~~~~~~~~~----~~~d~~~~~~~~~~~~pe~~~ 193 (365)
T PRK09188 158 LASVFRRRGALYRIA----AYEDLRHLLKHKRTYAPDALT 193 (365)
T ss_pred cceecccCcchhhhh----hhhhhhhhhccCccCCcccCC
Confidence 999775432111100 000012456778899999843
No 409
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.87 E-value=1e-20 Score=195.71 Aligned_cols=263 Identities=25% Similarity=0.342 Sum_probs=191.5
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccc--cHHHHHHHHHHHhcccCC-CeeeEEEEEEeCCceEEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATW--RFKDFESEVEAIARVQHP-NIVRLKAFYYANDEKLLI 423 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~E~~~l~~l~H~-nIv~l~~~~~~~~~~~lv 423 (642)
...+|.|+||.||++... ..+++|.+....... ....|.+|+.+++.+.|+ +|+++.+++......+++
T Consensus 5 ~~~l~~g~~~~v~~~~~~--------~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 76 (384)
T COG0515 5 LRKLGEGSFGEVYLARDR--------KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLV 76 (384)
T ss_pred EEeecCCCCeEEEEEEec--------cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEE
Confidence 356889999999999977 578888887664332 357899999999999988 799999999777778999
Q ss_pred EeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCC-CeEEeccccccc
Q 006522 424 SDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDEL-HPCISGFGLNRL 502 (642)
Q Consensus 424 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~-~~kl~DfGla~~ 502 (642)
++|+.++++.+++...... ..++......++.|++.++.|+|+ .+++|||+||+||+++... .++++|||.++.
T Consensus 77 ~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~H~---~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~ 151 (384)
T COG0515 77 MEYVDGGSLEDLLKKIGRK--GPLSESEALFILAQILSALEYLHS---KGIIHRDIKPENILLDRDGRVVKLIDFGLAKL 151 (384)
T ss_pred EecCCCCcHHHHHHhcccc--cCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeeecCCCCeEEEeccCccee
Confidence 9999999999777654321 248889999999999999999999 7899999999999999988 799999999985
Q ss_pred CCCCCcccccceeeecCCCcccccCCCcccCccccccC--CCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHH
Q 006522 503 LPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYG--SKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLV 580 (642)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~ 580 (642)
........... .......||..|+|||..... ..++...|+||+|++++++++|..||...... .......
T Consensus 152 ~~~~~~~~~~~------~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~-~~~~~~~ 224 (384)
T COG0515 152 LPDPGSTSSIP------ALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNS-SATSQTL 224 (384)
T ss_pred cCCCCcccccc------ccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCcc-ccHHHHH
Confidence 54332111000 012356788999999985542 47889999999999999999999997653321 0112222
Q ss_pred HHHHhccCC-CccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 581 RKAFRERRP-LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 581 ~~~~~~~~~-~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
........+ ......+... ......+.+++..|+..+|..|.++.+...
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 274 (384)
T COG0515 225 KIILELPTPSLASPLSPSNP-----ELISKAASDLLKKLLAKDPKNRLSSSSDLS 274 (384)
T ss_pred HHHHhcCCcccccccCcccc-----chhhHHHHHHHHHHHhcCchhcCCHHHHhh
Confidence 222222211 1111111100 111234556888899999999999887654
No 410
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.87 E-value=4.6e-23 Score=225.62 Aligned_cols=261 Identities=18% Similarity=0.191 Sum_probs=184.9
Q ss_pred hcccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCC-CccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEE
Q 006522 345 ASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG-DATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLI 423 (642)
Q Consensus 345 ~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 423 (642)
....++|.|++|.++.+........+..+.+.+| .... ........+..|..+-.+++|||++..+..+++....+-+
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~-~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~ 399 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVR-VKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQS 399 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcc-cCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhh
Confidence 3568999999998888887776544444455544 2122 1122223367788889999999999888888777777777
Q ss_pred EeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccC
Q 006522 424 SDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLL 503 (642)
Q Consensus 424 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 503 (642)
|||+++ ||+.++.... .+.-..+-.+++|+..|++|+|+ .+|.|||+|++|+++..++.+||+|||.+...
T Consensus 400 mE~~~~-Dlf~~~~~~~-----~~~~~e~~c~fKqL~~Gv~y~h~---~GiahrdlK~enll~~~~g~lki~Dfg~~~vf 470 (601)
T KOG0590|consen 400 MEYCPY-DLFSLVMSNG-----KLTPLEADCFFKQLLRGVKYLHS---MGLAHRDLKLENLLVTENGILKIIDFGAASVF 470 (601)
T ss_pred hhcccH-HHHHHHhccc-----ccchhhhhHHHHHHHHHHHHHHh---cCceeccCccccEEEecCCceEEeecCcceee
Confidence 999999 9999997652 26677888999999999999999 89999999999999999999999999998765
Q ss_pred CCCCcccccceeeecCCCcccccCCCcccCccccccCCCCC-cccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHH
Q 006522 504 PGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFT-QKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRK 582 (642)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~-~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~ 582 (642)
...... ........+|+..|+|||++.. ..|+ ...||||.||++..|++|+.||..+....... ...
T Consensus 471 ~~~~e~--------~~~~~~g~~gS~pY~apE~~~~-~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~---~~~ 538 (601)
T KOG0590|consen 471 RYPWEK--------NIHESSGIVGSDPYLAPEVLTG-KEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSF---KTN 538 (601)
T ss_pred ccCcch--------hhhhhcCcccCCcCcCcccccc-cccCcchhhhhhccceEEEEecCCCccccccccccch---hhh
Confidence 432110 0011225678889999999665 5554 56799999999999999999997655433221 000
Q ss_pred HHhccCCCccccC-hhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Q 006522 583 AFRERRPLSEVID-PALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSE 634 (642)
Q Consensus 583 ~~~~~~~~~~~~d-~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~ 634 (642)
....... .... ..+.. .--.+.-.++.++++.||.+|.|+.+|++
T Consensus 539 ~~~~~~~--~~~~~~~~~~-----~lp~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 539 NYSDQRN--IFEGPNRLLS-----LLPRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred ccccccc--cccChHHHHH-----hchhhHHHHHHHHccCChhheecHHHHhh
Confidence 0000000 0000 00111 11123345888999999999999999985
No 411
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.86 E-value=4.3e-20 Score=190.49 Aligned_cols=264 Identities=18% Similarity=0.201 Sum_probs=185.3
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccC----CCeeeEEEEE-EeCCce
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQH----PNIVRLKAFY-YANDEK 420 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H----~nIv~l~~~~-~~~~~~ 420 (642)
....||+|+||.||.|...... ...+|+|.......... ..+..|+.++..+.+ +++..+++.. ......
T Consensus 22 i~~~iG~G~fG~V~~v~~~~~~----~~~~a~K~e~~~~~~~~-~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~ 96 (322)
T KOG1164|consen 22 LGKKIGEGGFGAVYLVSDKSEK----NKEYAKKLEKKELGSKP-SVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFN 96 (322)
T ss_pred EeeeccccCCceEEEEEecCCC----CeeEEEEEEEecccCCC-ccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCcee
Confidence 3568999999999999987763 26788888776533322 267789999998873 5889999998 477788
Q ss_pred EEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCC-----CCeEEe
Q 006522 421 LLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDE-----LHPCIS 495 (642)
Q Consensus 421 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~-----~~~kl~ 495 (642)
++||+.+ |.+|.++...... ..++-.+...|+.|++.+|.+||+ .+++||||||+|+++... ..+.+.
T Consensus 97 ~iVM~l~-G~sL~dl~~~~~~---~~fs~~T~l~ia~q~l~~l~~lH~---~G~iHRDiKp~N~~~g~~~~~~~~~~~ll 169 (322)
T KOG1164|consen 97 FIVMSLL-GPSLEDLRKRNPP---GRFSRKTVLRIAIQNLNALEDLHS---KGFIHRDIKPENFVVGQSSRSEVRTLYLL 169 (322)
T ss_pred EEEEecc-CccHHHHHHhCCC---CCcCHhHHHHHHHHHHHHHHHHHh---cCcccCCcCHHHeeecCCCCcccceEEEE
Confidence 9999977 7799998865542 348999999999999999999999 899999999999999754 469999
Q ss_pred cccccccCC--CCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCc
Q 006522 496 GFGLNRLLP--GTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDG 573 (642)
Q Consensus 496 DfGla~~~~--~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~ 573 (642)
|||+++... ...... ............||..|.++.+.. +...+.+.|+||++.++.|+..|..||.......
T Consensus 170 DfGlar~~~~~~~~~~~----~~~~r~~~~~~rGT~ry~S~~~H~-~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~ 244 (322)
T KOG1164|consen 170 DFGLARRFKYVGDSGGN----LRPPRPQKGLFRGTLRYASINVHL-GIEQGRRDDLESLFYMLLELLKGSLPWEALEMTD 244 (322)
T ss_pred ecCCCccccccCCCCcc----cccCCCCccCCCCccccccHHHhC-CCccCCchhhhhHHHHHHHHhcCCCCCccccccc
Confidence 999998332 221100 000111112345999999999854 4788999999999999999999999996543321
Q ss_pred ccHHHHHHHHHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhh
Q 006522 574 KGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLDRV 639 (642)
Q Consensus 574 ~~l~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~~l 639 (642)
. ... +......... .. ... ... ..+.++...+-..+...+|....+...|+..
T Consensus 245 ~-~~~-~~~~~~~~~~-~~-----~~~--~~~---~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~ 297 (322)
T KOG1164|consen 245 L-KSK-FEKDPRKLLT-DR-----FGD--LKP---EEFAKILEYIDSLDYEDKPDYEKLAELLKDV 297 (322)
T ss_pred h-HHH-HHHHhhhhcc-cc-----ccC--CCh---HHHHHHHHHhhccCCcCCCCHHHHHHHHHHH
Confidence 1 111 1111111110 00 000 001 1223344445557899999999888887654
No 412
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.85 E-value=3.1e-21 Score=201.33 Aligned_cols=217 Identities=24% Similarity=0.348 Sum_probs=162.1
Q ss_pred HhcccCCCeeeEEEEEEeCCceEEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCc-eec
Q 006522 399 IARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKY-VHG 477 (642)
Q Consensus 399 l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~i-iHr 477 (642)
|+.+.|.|+.+++|.+.+....+.|.+||..|+|.|.+..... .++|.....+.++|++||+|+|. .+| .|+
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~----~~d~~F~~s~~rdi~~Gl~ylh~---s~i~~hg 73 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDI----KLDYFFILSFIRDISKGLAYLHN---SPIGYHG 73 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhcccc----CccHHHHHHHHHHHHHHHHHHhc---Ccceeee
Confidence 4678999999999999999999999999999999999987443 49999999999999999999998 444 999
Q ss_pred CCCCCCeeeCCCCCeEEecccccccCCCCCcccccceeeecCCCcccccCCCcccCccccccC--C----CCCcccchHH
Q 006522 478 NIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYG--S----KFTQKCDVYS 551 (642)
Q Consensus 478 Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~----~~~~~sDV~S 551 (642)
.++++|+++|....+|++|||+.............. ...-...|.|||.+... . ..+.+.||||
T Consensus 74 ~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~----------~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs 143 (484)
T KOG1023|consen 74 ALKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHH----------PIRKALLWTAPELLRGALSQSLESALTQKGDIYS 143 (484)
T ss_pred eeccccceeeeeEEEEechhhhcccccccccccccc----------hhHHHHhccCHHHhcccccccccccccccCCeeh
Confidence 999999999999999999999987764311000000 11112349999985431 1 1477899999
Q ss_pred HHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHh-ccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHH
Q 006522 552 FGIVLLEILTGRLPDAGPENDGKGLESLVRKAFR-ERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMR 630 (642)
Q Consensus 552 ~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ 630 (642)
||++++|+++.+.||+........ .+.+..... ...+ +-|.+.... +....+..++..||..+|++||+++
T Consensus 144 ~~ii~~ei~~r~~~~~~~~~~~~~-~eii~~~~~~~~~~----~rP~i~~~~---e~~~~l~~l~~~cw~e~P~~rPs~~ 215 (484)
T KOG1023|consen 144 FGIIMYEILFRSGPFDLRNLVEDP-DEIILRVKKGGSNP----FRPSIELLN---ELPPELLLLVARCWEEIPEKRPSIE 215 (484)
T ss_pred HHHHHHHHHhccCccccccccCCh-HHHHHHHHhcCCCC----cCcchhhhh---hcchHHHHHHHHhcccChhhCccHH
Confidence 999999999999999875444332 333333333 2222 222222111 1122577899999999999999999
Q ss_pred HHHHHHHhhh
Q 006522 631 TVSESLDRVK 640 (642)
Q Consensus 631 ev~~~L~~l~ 640 (642)
+|-..++.+.
T Consensus 216 ~i~~~~~~~~ 225 (484)
T KOG1023|consen 216 QIRSKLLTIN 225 (484)
T ss_pred HHHhhhhhhc
Confidence 9988887653
No 413
>PLN03150 hypothetical protein; Provisional
Probab=99.84 E-value=2.2e-20 Score=207.70 Aligned_cols=134 Identities=34% Similarity=0.543 Sum_probs=94.9
Q ss_pred CCchHhHHHHHHHHHhcccCCCCCCCCCCCCCCC---CCCceeeEecC------CCEeEEEcCCCCccccCCccccCCCC
Q 006522 20 FSLNQDGLALLALKAAIAQDPTRALDSWSESDST---PCHWSGIHCIR------NRVTSLYLPNRNLTGYMPSELGLLNS 90 (642)
Q Consensus 20 ~~~~~~~~~l~~~~~~~~~~~~~~~~~w~~~~~~---~c~w~gv~c~~------~~v~~l~l~~~~l~g~~p~~l~~l~~ 90 (642)
.....|..||+.+|+++. ++. ..+|++ ++| .|.|.||.|.. ..|+.|+|++|++.|.+|+.++.|++
T Consensus 368 ~t~~~~~~aL~~~k~~~~-~~~--~~~W~g-~~C~p~~~~w~Gv~C~~~~~~~~~~v~~L~L~~n~L~g~ip~~i~~L~~ 443 (623)
T PLN03150 368 KTLLEEVSALQTLKSSLG-LPL--RFGWNG-DPCVPQQHPWSGADCQFDSTKGKWFIDGLGLDNQGLRGFIPNDISKLRH 443 (623)
T ss_pred ccCchHHHHHHHHHHhcC-Ccc--cCCCCC-CCCCCcccccccceeeccCCCCceEEEEEECCCCCccccCCHHHhCCCC
Confidence 345578999999999985 433 248964 232 12799999952 13677777777777777777777777
Q ss_pred CCEEEccCCCCCCccccccccCCccceeeccCCcccccCcccccCCCCcCeEecccccCCCcchhHh
Q 006522 91 LTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFL 157 (642)
Q Consensus 91 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 157 (642)
|+.|+|++|+|.|.+|..+..+++|+.|+|++|+++|.+|+.+.+|++|+.|+|++|.|+|.+|..+
T Consensus 444 L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~l 510 (623)
T PLN03150 444 LQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAAL 510 (623)
T ss_pred CCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccccCChHH
Confidence 7777777777777777777777777777777777777777777777777777777777766666554
No 414
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.84 E-value=1.2e-20 Score=178.28 Aligned_cols=139 Identities=13% Similarity=0.164 Sum_probs=106.7
Q ss_pred cccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccc-c-------HHH-----------------HHHHHHHHhcc
Q 006522 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATW-R-------FKD-----------------FESEVEAIARV 402 (642)
Q Consensus 348 ~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~-~-------~~~-----------------~~~E~~~l~~l 402 (642)
..||+|++|.||+|...++ +.||||+++...... . ..+ ..+|++++.++
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g------~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 76 (190)
T cd05147 3 GCISTGKEANVYHATTANG------EERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRL 76 (190)
T ss_pred CccccccceEEEEEECCCC------CEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHH
Confidence 5799999999999998754 899999997542110 0 012 23599999999
Q ss_pred cCCCeeeEEEEEEeCCceEEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHH-HhcCCCCceecCCCC
Q 006522 403 QHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYI-HEYSPRKYVHGNIKS 481 (642)
Q Consensus 403 ~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yL-H~~~~~~iiHrDlkp 481 (642)
.|+++.....+.. ...++||||++++++....... .++++.....++.|++.+|+|+ |+ .+|+||||||
T Consensus 77 ~~~~v~~p~~~~~--~~~~iVmE~i~g~~l~~~~~~~-----~~~~~~~~~~i~~qi~~~L~~l~H~---~giiHrDlkP 146 (190)
T cd05147 77 VTAGIPCPEPILL--KSHVLVMEFIGDDGWAAPRLKD-----APLSESKARELYLQVIQIMRILYQD---CRLVHADLSE 146 (190)
T ss_pred HHCCCCCCcEEEe--cCCEEEEEEeCCCCCcchhhhc-----CCCCHHHHHHHHHHHHHHHHHHHHh---CCcccCCCCH
Confidence 8887644333322 2348999999998776543222 1488899999999999999999 57 7999999999
Q ss_pred CCeeeCCCCCeEEecccccccC
Q 006522 482 TKILLDDELHPCISGFGLNRLL 503 (642)
Q Consensus 482 ~NILl~~~~~~kl~DfGla~~~ 503 (642)
+||+++ ++.++|+|||+|...
T Consensus 147 ~NIli~-~~~v~LiDFG~a~~~ 167 (190)
T cd05147 147 YNLLYH-DGKLYIIDVSQSVEH 167 (190)
T ss_pred HHEEEE-CCcEEEEEccccccC
Confidence 999998 478999999998754
No 415
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.83 E-value=7.4e-22 Score=205.52 Aligned_cols=191 Identities=26% Similarity=0.316 Sum_probs=156.5
Q ss_pred ccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCcc-ccHHHHHHHHHHHhccc-CCCeeeEEEEEEeCCceEEEEee
Q 006522 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT-WRFKDFESEVEAIARVQ-HPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 349 ~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
++|+|.||.|+.+....+.. +...+|.|.+++.... ........|-.++..++ ||.+|++...++.+...+++++|
T Consensus 1 vlg~g~~gkvfLvrk~~g~d--a~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~ 78 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGAD--AGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDF 78 (612)
T ss_pred CCCcCCCcchHHHHHhcccc--ccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhh
Confidence 47899999999877655432 2367888877665211 11124456888888886 99999999999999999999999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCC
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 506 (642)
..+|+|...+..... +++.....+...+|-|++++|+ .+|+|||+|++||+++.+|++|+.|||+++..-..
T Consensus 79 ~rgg~lft~l~~~~~-----f~~~~~~~~~aelaLald~lh~---l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~ 150 (612)
T KOG0603|consen 79 LRGGDLFTRLSKEVM-----FDELDVAFYLAELALALDHLHK---LGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKE 150 (612)
T ss_pred cccchhhhccccCCc-----hHHHHHHHHHHHHHHHHhhcch---hHHHHhcccccceeecccCccccCCchhhhHhHhh
Confidence 999999988876543 6677777788889999999999 89999999999999999999999999999876433
Q ss_pred CcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCC
Q 006522 507 SKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAG 568 (642)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~ 568 (642)
. ..+||..|||||+.. ....++|.||||++++||+||..||..
T Consensus 151 ~----------------~~cgt~eymApEI~~---gh~~a~D~ws~gvl~felltg~~pf~~ 193 (612)
T KOG0603|consen 151 K----------------IACGTYEYRAPEIIN---GHLSAADWWSFGVLAFELLTGTLPFGG 193 (612)
T ss_pred h----------------hcccchhhhhhHhhh---ccCCcccchhhhhhHHHHhhCCCCCch
Confidence 1 227888999999843 467899999999999999999999974
No 416
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.83 E-value=3.2e-20 Score=173.11 Aligned_cols=194 Identities=15% Similarity=0.142 Sum_probs=137.3
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccc---cHHHHHHHHHHHhccc-CCCeeeEEEEEEeCCceEE
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATW---RFKDFESEVEAIARVQ-HPNIVRLKAFYYANDEKLL 422 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~l 422 (642)
...|++|+||+||.+... + ..++.+.+....... ....|.+|+++|++++ |++|++++++ +..++
T Consensus 7 ~~~l~~~~f~~v~~~~~~-~------~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~l 75 (218)
T PRK12274 7 NEPLKSDTFGRILLVRGG-E------RKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHL 75 (218)
T ss_pred ceeecCCCcceEEEeecC-C------ceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEE
Confidence 467999999999976652 2 677777776543211 1135889999999994 5889999886 45799
Q ss_pred EEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCC-CCCCeeeCCCCCeEEecccccc
Q 006522 423 ISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNI-KSTKILLDDELHPCISGFGLNR 501 (642)
Q Consensus 423 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDl-kp~NILl~~~~~~kl~DfGla~ 501 (642)
+|||++|.+|.+.+.. ....++.|++.+|.|+|+ .+|+|||| ||+|||++.++.++|+|||++.
T Consensus 76 vmeyI~G~~L~~~~~~------------~~~~~~~qi~~~L~~lH~---~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~ 140 (218)
T PRK12274 76 DRSYLAGAAMYQRPPR------------GDLAYFRAARRLLQQLHR---CGVAHNDLAKEANWLVQEDGSPAVIDFQLAV 140 (218)
T ss_pred EEeeecCccHHhhhhh------------hhHHHHHHHHHHHHHHHH---CcCccCCCCCcceEEEcCCCCEEEEECCCce
Confidence 9999999998754321 113578899999999999 89999999 7999999999999999999998
Q ss_pred cCCCCCccc---ccceeeecCCCcccccCCCcccCccccccCCCCC-cccchHHHHHHHHHHHhCCCCCCC
Q 006522 502 LLPGTSKVT---KNETIVTSGTGSRISAISNVYLAPEARIYGSKFT-QKCDVYSFGIVLLEILTGRLPDAG 568 (642)
Q Consensus 502 ~~~~~~~~~---~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~-~~sDV~S~Gvvl~el~tG~~P~~~ 568 (642)
......... ........- ..-...++.|++|+....-...+ .+.+.++.|+-+|.++||..++.+
T Consensus 141 ~~~~~~~~~r~L~~rDl~~ll--k~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~ 209 (218)
T PRK12274 141 RGNPRARWMRLLAREDLRHLL--KHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWE 209 (218)
T ss_pred ecCCcchHHHHHHHHHHHHHH--HHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccc
Confidence 654332110 000000000 00122566788887522212233 567889999999999999998764
No 417
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.83 E-value=7e-20 Score=168.27 Aligned_cols=258 Identities=18% Similarity=0.201 Sum_probs=184.0
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccC-CCeeeEEEEEEeCCceEEEEe
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQH-PNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H-~nIv~l~~~~~~~~~~~lv~e 425 (642)
...||.|+||.+|.+..-..+ ..||+|.-+..... .++..|..+...++| ..|..+..|..+.+.-.+|||
T Consensus 20 vrkiGsGSFGdIy~~~~i~~g-----e~VAiK~Es~~a~h---pqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMd 91 (341)
T KOG1163|consen 20 VRKIGSGSFGDIYLGISITSG-----EEVAIKLESSKAKH---PQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMD 91 (341)
T ss_pred EEeecCCchhheeeeeeccCC-----ceEEEEeecccCCC---cchhHHHHHHHHhccCCCCchhhhhccccccceeeee
Confidence 367999999999999876665 89999987764333 567789999999965 667788888888899999999
Q ss_pred eccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeC---CCCCeEEeccccccc
Q 006522 426 FIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLD---DELHPCISGFGLNRL 502 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~---~~~~~kl~DfGla~~ 502 (642)
.. |.||.++..-..+ .++..+.+-++-|++.-++|+|. +++|||||||+|+|.. ....+.++|||+|+.
T Consensus 92 LL-GPsLEdLfnfC~R----~ftmkTvLMLaDQml~RiEyvH~---r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKk 163 (341)
T KOG1163|consen 92 LL-GPSLEDLFNFCSR----RFTMKTVLMLADQMLSRIEYVHL---RNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKK 163 (341)
T ss_pred cc-CccHHHHHHHHhh----hhhHHhHHHHHHHHHHHHHHHHh---hccccccCCccceeeccccccceEEEEeccchhh
Confidence 88 7899999875543 38889999999999999999999 8999999999999995 346788999999998
Q ss_pred CCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHH
Q 006522 503 LPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRK 582 (642)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~ 582 (642)
+.+......- .-...+...||..|.+-..... ..-+.+.|+=|+|.+|...--|..||.+.....+ .+-.++
T Consensus 164 y~d~~t~~HI-----pyre~r~ltGTaRYASinAh~g-~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk--~QKyEk 235 (341)
T KOG1163|consen 164 YRDIRTRQHI-----PYREDRNLTGTARYASINAHLG-IEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATK--KQKYEK 235 (341)
T ss_pred hccccccccC-----ccccCCccceeeeehhhhhhhh-hhhhhhhhhhhhcceeeeeecCCCcccccchhhH--HHHHHH
Confidence 7544221110 1112235678999988776443 5567889999999999999999999987544321 111122
Q ss_pred HHhccCC-CccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHH
Q 006522 583 AFRERRP-LSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 637 (642)
Q Consensus 583 ~~~~~~~-~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~ 637 (642)
+....-. ..+. +.+... .++.-.+.-|-..--++-|...-+-+.+.
T Consensus 236 I~EkK~s~~ie~----LC~G~P-----~EF~myl~Y~R~L~F~E~Pdy~ylrqlFr 282 (341)
T KOG1163|consen 236 ISEKKMSTPIEV----LCKGFP-----AEFAMYLNYCRGLGFEEKPDYMYLRQLFR 282 (341)
T ss_pred HHHhhcCCCHHH----HhCCCc-----HHHHHHHHHHhhcCCCCCCcHHHHHHHHH
Confidence 2111110 0111 112111 23444556677777777777655554443
No 418
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.82 E-value=4e-20 Score=176.49 Aligned_cols=165 Identities=12% Similarity=0.143 Sum_probs=126.2
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccc--cHHH------HHHHHHHHhcccCCCeeeEEEEEEeC-
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATW--RFKD------FESEVEAIARVQHPNIVRLKAFYYAN- 417 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~------~~~E~~~l~~l~H~nIv~l~~~~~~~- 417 (642)
.+++|.|+||.||.+.. .+ ..+|+|.+....... .... +.+|+..+.+++||+|..+.+++...
T Consensus 36 ~~~l~~~~f~~v~l~~~-~~------~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~ 108 (232)
T PRK10359 36 IKVFRNIDDTKVSLIDT-DY------GKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAE 108 (232)
T ss_pred EEEecCCCceEEEEEec-CC------CcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecc
Confidence 58999999999999655 33 579999997653221 1122 68999999999999999999987643
Q ss_pred -------CceEEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCC
Q 006522 418 -------DEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDEL 490 (642)
Q Consensus 418 -------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~ 490 (642)
...++||||++|.+|.++.. ++. ....+++.+|..+|+ .+++|||+||+||+++.++
T Consensus 109 ~~~~~~~~~~~lvmEyi~G~tL~~~~~---------~~~----~~~~~i~~~l~~lH~---~gi~H~Dikp~Nili~~~g 172 (232)
T PRK10359 109 RKTLRYAHTYIMLIEYIEGVELNDMPE---------ISE----DVKAKIKASIESLHQ---HGMVSGDPHKGNFIVSKNG 172 (232)
T ss_pred cccccccCCeEEEEEEECCccHHHhhh---------ccH----HHHHHHHHHHHHHHH---cCCccCCCChHHEEEeCCC
Confidence 35789999999999988732 222 345699999999999 8999999999999999988
Q ss_pred CeEEecccccccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHH
Q 006522 491 HPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEIL 560 (642)
Q Consensus 491 ~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~ 560 (642)
++++|||..+...... |-+.+.....++.++|+||||+++.-..
T Consensus 173 -i~liDfg~~~~~~e~~-------------------------a~d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 173 -LRIIDLSGKRCTAQRK-------------------------AKDRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred -EEEEECCCcccccchh-------------------------hHHHHHHHhHhcccccccceeEeehHHH
Confidence 9999999876543221 1111223356778999999999976554
No 419
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.81 E-value=4.6e-19 Score=170.19 Aligned_cols=204 Identities=15% Similarity=0.201 Sum_probs=164.7
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcc-cCCCeeeEEEEEEeCCceEEEE
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLIS 424 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~ 424 (642)
-+..||+|.||+.+.|..--.+ ..||||.-...... .++..|....+.| ..+.|..++-|..+.-+-.||+
T Consensus 32 VGkKIGeGsFG~lf~G~Nl~nn-----e~VAIKfEPrkS~A---PQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVi 103 (449)
T KOG1165|consen 32 VGKKIGEGSFGVLFLGKNLYNN-----EPVAIKFEPRKSEA---PQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVI 103 (449)
T ss_pred eccccccCcceeeecccccccC-----ceEEEEeccccCCc---chHHHHHHHHHHHcCCCCCCceeeeccccchhhhhh
Confidence 4678999999999999866554 89999986554332 5667788888877 5689999888888888889999
Q ss_pred eeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCC-----CCCeEEecccc
Q 006522 425 DFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDD-----ELHPCISGFGL 499 (642)
Q Consensus 425 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~-----~~~~kl~DfGl 499 (642)
|.+ |.||.|+..-.++ .|+.+++..||.|++.-++|+|+ +.+|.|||||+|+||.. ...+.+.|||+
T Consensus 104 dLL-GPSLEDLFD~CgR----~FSvKTV~miA~Qmi~rie~vH~---k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGm 175 (449)
T KOG1165|consen 104 DLL-GPSLEDLFDLCGR----RFSVKTVAMIAKQMITRIEYVHE---KDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGM 175 (449)
T ss_pred hhh-CcCHHHHHHHhcC----cccHHhHHHHHHHHHHHHHHHHh---cceeecccCccceeecCCCCCCCceEEEEeccc
Confidence 988 7899998876654 39999999999999999999999 89999999999999953 35689999999
Q ss_pred cccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCC
Q 006522 500 NRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPEN 571 (642)
Q Consensus 500 a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~ 571 (642)
|+.+.+......... .......||..||+-...++ +.-+.+-|+=|+|-++...+-|..||.+-..
T Consensus 176 AK~YrDp~TkqHIPY-----rE~KSLsGTARYMSINTHlG-rEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA 241 (449)
T KOG1165|consen 176 AKEYRDPKTKQHIPY-----REHKSLSGTARYMSINTHLG-REQSRRDDLEALGHVFMYFLRGSLPWQGLKA 241 (449)
T ss_pred hhhhcCccccccCcc-----ccccccccceeeeEeecccc-chhhhhhhHHHhhhhhhhhccCCCccccccC
Confidence 998865532221111 11124568999999998664 7788999999999999999999999987554
No 420
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.81 E-value=1.1e-20 Score=205.89 Aligned_cols=253 Identities=21% Similarity=0.284 Sum_probs=175.6
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHH--HhcccCCCeeeEEEEEEeCCceEEE
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEA--IARVQHPNIVRLKAFYYANDEKLLI 423 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~--l~~l~H~nIv~l~~~~~~~~~~~lv 423 (642)
....+|.+.|=.|.++++.+| .|+||++-+.+..-..+.|.++++- ...++|||++++.-+-......|||
T Consensus 27 ~~~~LGstRFlKv~r~k~~eG-------~vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylv 99 (1431)
T KOG1240|consen 27 YVENLGSTRFLKVARAKDREG-------LVVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLV 99 (1431)
T ss_pred eecccCchhhhhhhhccCCCc-------eEEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHH
Confidence 356799999999999999887 4888988776544444555544433 4455999999988776677778899
Q ss_pred EeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccC
Q 006522 424 SDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLL 503 (642)
Q Consensus 424 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~ 503 (642)
=+|..+ +|+|.|..+. .+...+..-|+.|++.||.-+|. .+|+|+|||.+|||+..-.-+.|+||..-|..
T Consensus 100 Rqyvkh-nLyDRlSTRP-----FL~~iEKkWiaFQLL~al~qcH~---~gVcHGDIKsENILiTSWNW~~LtDFAsFKPt 170 (1431)
T KOG1240|consen 100 RQYVKH-NLYDRLSTRP-----FLVLIEKKWIAFQLLKALSQCHK---LGVCHGDIKSENILITSWNWLYLTDFASFKPT 170 (1431)
T ss_pred HHHHhh-hhhhhhccch-----HHHHHHHHHHHHHHHHHHHHHHH---cCccccccccceEEEeeechhhhhcccccCCc
Confidence 999977 9999997543 47777888899999999999999 89999999999999999999999999755432
Q ss_pred CCCCcccccceeeecCCCcccccCCCcccCccccccCC----------CCCcccchHHHHHHHHHHHh-CCCCCCCCCCC
Q 006522 504 PGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGS----------KFTQKCDVYSFGIVLLEILT-GRLPDAGPEND 572 (642)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----------~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~ 572 (642)
--..+....-..-....+.+. -|+|||.+.... ..+++.||||.||++.||++ |++||.
T Consensus 171 YLPeDNPadf~fFFDTSrRRt-----CYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~----- 240 (1431)
T KOG1240|consen 171 YLPEDNPADFTFFFDTSRRRT-----CYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFT----- 240 (1431)
T ss_pred cCCCCCcccceEEEecCCcee-----eecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCccc-----
Confidence 111110101111111111112 299999865522 15678999999999999998 788885
Q ss_pred cccHHHHHHHHHhccCCCccccChh-hhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHH
Q 006522 573 GKGLESLVRKAFRERRPLSEVIDPA-LVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVSESLD 637 (642)
Q Consensus 573 ~~~l~~~~~~~~~~~~~~~~~~d~~-l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L~ 637 (642)
+.+........ ..+++ +.+.+.+ ..+-.+++.+++.||.+|.++++.++.-.
T Consensus 241 ---LSQL~aYr~~~------~~~~e~~Le~Ied----~~~Rnlil~Mi~rdPs~RlSAedyL~~yr 293 (1431)
T KOG1240|consen 241 ---LSQLLAYRSGN------ADDPEQLLEKIED----VSLRNLILSMIQRDPSKRLSAEDYLQKYR 293 (1431)
T ss_pred ---HHHHHhHhccC------ccCHHHHHHhCcC----ccHHHHHHHHHccCchhccCHHHHHHhhh
Confidence 23333222111 11221 1111111 13445788899999999999999987643
No 421
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.80 E-value=4.4e-19 Score=168.38 Aligned_cols=140 Identities=19% Similarity=0.264 Sum_probs=109.5
Q ss_pred cccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccc-c------------------------HHHHHHHHHHHhcc
Q 006522 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATW-R------------------------FKDFESEVEAIARV 402 (642)
Q Consensus 348 ~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~-~------------------------~~~~~~E~~~l~~l 402 (642)
..||+|++|.||+|...++ +.||||+++...... . ...+.+|.+.+.++
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g------~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 76 (190)
T cd05145 3 GCISTGKEANVYHARTGDG------EELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRL 76 (190)
T ss_pred ceeecCCCcEEEEEEcCCC------CEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHH
Confidence 4689999999999998744 899999988652110 0 12346899999999
Q ss_pred cCCCeeeEEEEEEeCCceEEEEeeccCCcHHHH-HhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCC
Q 006522 403 QHPNIVRLKAFYYANDEKLLISDFIRNGSLYAA-LHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKS 481 (642)
Q Consensus 403 ~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~~-l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp 481 (642)
+|++|.....+... ..++||||++++++... +... .++......++.|++.++.|+|+. .+|+||||||
T Consensus 77 ~~~~i~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~~------~~~~~~~~~i~~~l~~~l~~lH~~--~givHrDlkP 146 (190)
T cd05145 77 YEAGVPVPEPILLK--KNVLVMEFIGDDGSPAPRLKDV------PLEEEEAEELYEQVVEQMRRLYQE--AGLVHGDLSE 146 (190)
T ss_pred HhCCCCCceEEEec--CCEEEEEEecCCCchhhhhhhc------cCCHHHHHHHHHHHHHHHHHHHHh--CCEecCCCCh
Confidence 99988655444433 35899999998865443 3321 367788999999999999999973 4899999999
Q ss_pred CCeeeCCCCCeEEecccccccCC
Q 006522 482 TKILLDDELHPCISGFGLNRLLP 504 (642)
Q Consensus 482 ~NILl~~~~~~kl~DfGla~~~~ 504 (642)
+||+++ ++.++|+|||+++...
T Consensus 147 ~NIll~-~~~~~liDFG~a~~~~ 168 (190)
T cd05145 147 YNILYH-DGKPYIIDVSQAVELD 168 (190)
T ss_pred hhEEEE-CCCEEEEEcccceecC
Confidence 999999 7899999999997654
No 422
>PRK10345 hypothetical protein; Provisional
Probab=99.79 E-value=8.8e-19 Score=167.02 Aligned_cols=135 Identities=14% Similarity=0.133 Sum_probs=104.5
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcc-----cCCCeeeEEEEEEeCC--
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-----QHPNIVRLKAFYYAND-- 418 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-----~H~nIv~l~~~~~~~~-- 418 (642)
....||+|+||.||. .... ...+||++...... ..+++.+|+.+++++ +||||++++|++.++.
T Consensus 6 ~~~~LG~G~~~~Vy~--hp~~------~~k~IKv~~~~~~~-~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~ 76 (210)
T PRK10345 6 EQSPLGTGRHRKCYA--HPED------AQRCIKIVYHRGDG-GDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGT 76 (210)
T ss_pred CcceecCCCceEEEE--CCCC------cCeEEEEEeccccc-hHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCC
Confidence 357899999999995 4333 22368887654222 337899999999999 5799999999999874
Q ss_pred -ceE-EEEee--ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHH-HHHHhcCCCCceecCCCCCCeeeCC----C
Q 006522 419 -EKL-LISDF--IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGL-MYIHEYSPRKYVHGNIKSTKILLDD----E 489 (642)
Q Consensus 419 -~~~-lv~e~--~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL-~yLH~~~~~~iiHrDlkp~NILl~~----~ 489 (642)
..+ +|+|| +++|+|.+++.... +++. ..++.|++.++ +|||+ .+|+||||||+|||++. +
T Consensus 77 g~v~~~I~e~~G~~~~tL~~~l~~~~------~~e~--~~~~~~~L~~l~~yLh~---~~IvhrDlKp~NILl~~~~~~~ 145 (210)
T PRK10345 77 GYVYDVIADFDGKPSITLTEFAEQCR------YEED--VAQLRQLLKKLKRYLLD---NRIVTMELKPQNILCQRISESE 145 (210)
T ss_pred eEEEEEEecCCCCcchhHHHHHHccc------ccHh--HHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEeccCCCC
Confidence 333 78999 66899999996532 5545 35678888888 99999 89999999999999973 3
Q ss_pred CCeEEeccccc
Q 006522 490 LHPCISGFGLN 500 (642)
Q Consensus 490 ~~~kl~DfGla 500 (642)
..++|+||+.+
T Consensus 146 ~~~~LiDg~G~ 156 (210)
T PRK10345 146 VIPVVCDNIGE 156 (210)
T ss_pred CcEEEEECCCC
Confidence 48999995433
No 423
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.78 E-value=1.7e-18 Score=169.94 Aligned_cols=202 Identities=19% Similarity=0.196 Sum_probs=135.6
Q ss_pred cCCCeeeEEEEEEe---------------------------CCceEEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHH
Q 006522 403 QHPNIVRLKAFYYA---------------------------NDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKI 455 (642)
Q Consensus 403 ~H~nIv~l~~~~~~---------------------------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i 455 (642)
+|||||++.++|.+ +...|+||.-++. +|.+++..+. .+...+.-|
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~~------~s~r~~~~~ 346 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTRH------RSYRTGRVI 346 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcCC------CchHHHHHH
Confidence 69999999998754 1246899998876 9999997654 444566778
Q ss_pred HHHHHHHHHHHHhcCCCCceecCCCCCCeee--CCCC--CeEEecccccccCCCCCcccccceeeecCCCcccccCCCcc
Q 006522 456 AQGTARGLMYIHEYSPRKYVHGNIKSTKILL--DDEL--HPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVY 531 (642)
Q Consensus 456 ~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl--~~~~--~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y 531 (642)
..|+++|+.|||. ++|.|||+|++|||+ |+|. ...|+|||++--.....-....... .-...|...-
T Consensus 347 laQlLEav~hL~~---hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~------~Vd~GGNa~l 417 (598)
T KOG4158|consen 347 LAQLLEAVTHLHK---HGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESD------EVDLGGNAKL 417 (598)
T ss_pred HHHHHHHHHHHHH---ccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccc------cccCCCccee
Confidence 9999999999999 899999999999998 4443 4679999987543221100000000 0012344458
Q ss_pred cCccccccCCCC-----CcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHhccCCCccccChhhhhchhHHH
Q 006522 532 LAPEARIYGSKF-----TQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKR 606 (642)
Q Consensus 532 ~aPE~~~~~~~~-----~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 606 (642)
||||+....... =.|+|.|+.|.+.||+++...||..... ...+.....-.+-+++++.+.|.+..
T Consensus 418 mAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGe---m~L~~r~Yqe~qLPalp~~vpp~~rq------ 488 (598)
T KOG4158|consen 418 MAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGE---MLLDTRTYQESQLPALPSRVPPVARQ------ 488 (598)
T ss_pred cchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccch---heechhhhhhhhCCCCcccCChHHHH------
Confidence 999984432111 2589999999999999999999986322 11111111112233455666665543
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCHHHHHHHH
Q 006522 607 QVLATFHIALNCTELDPEFRPRMRTVSESL 636 (642)
Q Consensus 607 ~~~~~~~l~~~Cl~~dP~~RPs~~ev~~~L 636 (642)
++...++.||.+|++..-..+.|
T Consensus 489 -------lV~~lL~r~pskRvsp~iAANvl 511 (598)
T KOG4158|consen 489 -------LVFDLLKRDPSKRVSPNIAANVL 511 (598)
T ss_pred -------HHHHHhcCCccccCCccHHHhHH
Confidence 55668999999999976655544
No 424
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.72 E-value=1e-17 Score=164.77 Aligned_cols=199 Identities=21% Similarity=0.281 Sum_probs=130.1
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC--ccccHHHHHHHHHHHhcccC----------CCeeeEEEE
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD--ATWRFKDFESEVEAIARVQH----------PNIVRLKAF 413 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H----------~nIv~l~~~ 413 (642)
.+..||.|+++.||.+.+..++ +.+|||...... .....+++.+|.-....+.+ -.++--++.
T Consensus 16 ~~~~i~~g~~~~v~~v~d~~t~-----~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~ 90 (288)
T PF14531_consen 16 RGRIIGKGGFSIVFEVTDVETG-----EEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDL 90 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTTT-----EEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEE
T ss_pred EccccccCCceEEEEEEEccCC-----ceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEE
Confidence 3578999999999999998876 899999876442 23345777777765555432 122222222
Q ss_pred EE---------eCC--------ceEEEEeeccCCcHHHHHhc---CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC
Q 006522 414 YY---------AND--------EKLLISDFIRNGSLYAALHA---GPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRK 473 (642)
Q Consensus 414 ~~---------~~~--------~~~lv~e~~~~gsL~~~l~~---~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ 473 (642)
.. ... ..+++|+-+. +||.+++.. .... ...+....++.+..|+++.+++||+ .+
T Consensus 91 ~~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~~~~~~-~~~l~~~arl~lT~Q~I~lvA~Lh~---~G 165 (288)
T PF14531_consen 91 LRIPGKPPFFERGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALFSRAQT-HSPLAFAARLSLTVQMIRLVANLHS---YG 165 (288)
T ss_dssp EEETTS-SEEEECETTEEEEEESEEEEEE--S-EEHHHHHHHHHHHTTT-SHHHHHHHHHHHHHHHHHHHHHHHH---TT
T ss_pred EEEcCCCcceecCCCCccceeehhhhccchhh-hcHHHHHHHHhhcccc-cchhHHHHHHHHHHHHHHHHHHHhh---cc
Confidence 22 111 2367788774 589887642 2211 1235556778888999999999999 89
Q ss_pred ceecCCCCCCeeeCCCCCeEEecccccccCCCCCcccccceeeecCCCcccccCCCcccCccccccC-------CCCCcc
Q 006522 474 YVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYG-------SKFTQK 546 (642)
Q Consensus 474 iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-------~~~~~~ 546 (642)
++|+||||+|++++.+|.+.|+||+......... . ....+..|.+||..... -.++.+
T Consensus 166 lVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~---------~------~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~ 230 (288)
T PF14531_consen 166 LVHGDIKPENFLLDQDGGVFLGDFSSLVRAGTRY---------R------CSEFPVAFTPPELESCAGQFGQNNAPYTFA 230 (288)
T ss_dssp EEEST-SGGGEEE-TTS-EEE--GGGEEETTEEE---------E------GGGS-TTTS-HHHHHHHTSCHHSEEEE-HH
T ss_pred eEecccceeeEEEcCCCCEEEcChHHHeecCcee---------e------ccCCCcccCChhhhhhhcccCcccceeeec
Confidence 9999999999999999999999998665432210 0 01233568999974331 247899
Q ss_pred cchHHHHHHHHHHHhCCCCCCCC
Q 006522 547 CDVYSFGIVLLEILTGRLPDAGP 569 (642)
Q Consensus 547 sDV~S~Gvvl~el~tG~~P~~~~ 569 (642)
.|.|++|+++|.|.+|+.||...
T Consensus 231 ~DaW~LG~~ly~lWC~~lPf~~~ 253 (288)
T PF14531_consen 231 TDAWQLGITLYSLWCGRLPFGLS 253 (288)
T ss_dssp HHHHHHHHHHHHHHHSS-STCCC
T ss_pred cCHHHHHHHHHHHHHccCCCCCC
Confidence 99999999999999999999854
No 425
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.71 E-value=8.9e-17 Score=155.68 Aligned_cols=135 Identities=12% Similarity=0.257 Sum_probs=112.0
Q ss_pred cccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCcc-------ccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCce
Q 006522 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT-------WRFKDFESEVEAIARVQHPNIVRLKAFYYANDEK 420 (642)
Q Consensus 348 ~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~-------~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 420 (642)
..||+|++|.||+|... + ..+++|+....... .....+.+|++++..++|++|+....++...+..
T Consensus 2 ~~l~~G~~~~vy~~~~~-~------~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~ 74 (211)
T PRK14879 2 KLIKRGAEAEIYLGDFL-G------IKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENF 74 (211)
T ss_pred cccccCceEEEEEEeeC-C------CceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCC
Confidence 46899999999999873 2 56888876543211 1124678999999999999998888888788889
Q ss_pred EEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEeccccc
Q 006522 421 LLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLN 500 (642)
Q Consensus 421 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla 500 (642)
++||||++|++|.+++... .+ .+..++.+++.+|.++|+ .+++|||++|.||+++ ++.++|+|||++
T Consensus 75 ~lv~e~~~G~~L~~~~~~~--------~~-~~~~i~~~i~~~l~~lH~---~~i~H~Dl~p~Nil~~-~~~~~liDf~~a 141 (211)
T PRK14879 75 IIVMEYIEGEPLKDLINSN--------GM-EELELSREIGRLVGKLHS---AGIIHGDLTTSNMILS-GGKIYLIDFGLA 141 (211)
T ss_pred EEEEEEeCCcCHHHHHHhc--------cH-HHHHHHHHHHHHHHHHHh---CCcccCCCCcccEEEE-CCCEEEEECCcc
Confidence 9999999999999998642 12 778999999999999999 8999999999999999 789999999987
Q ss_pred cc
Q 006522 501 RL 502 (642)
Q Consensus 501 ~~ 502 (642)
+.
T Consensus 142 ~~ 143 (211)
T PRK14879 142 EF 143 (211)
T ss_pred cC
Confidence 64
No 426
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.71 E-value=8.3e-17 Score=154.35 Aligned_cols=131 Identities=16% Similarity=0.298 Sum_probs=106.2
Q ss_pred ccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCc-------cccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceE
Q 006522 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA-------TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKL 421 (642)
Q Consensus 349 ~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 421 (642)
+||+|++|.||++... + ..+++|....... ....+++.+|++++.+++|+++.....++...+..+
T Consensus 1 ~ig~G~~~~vy~~~~~-~------~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~ 73 (199)
T TIGR03724 1 LIAKGAEAIIYLGDFL-G------LKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKT 73 (199)
T ss_pred CCCCCceEEEEEeecC-C------ccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCE
Confidence 4899999999999843 2 5788887543211 112356789999999999988766666666777789
Q ss_pred EEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccc
Q 006522 422 LISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNR 501 (642)
Q Consensus 422 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 501 (642)
+||||++|++|.+.+.... ..++.+++.+|.+||+ .+++|||+||.||+++ ++.+++.|||+++
T Consensus 74 lv~e~~~g~~l~~~~~~~~------------~~~~~~i~~~l~~lH~---~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~ 137 (199)
T TIGR03724 74 IVMEYIEGKPLKDVIEEGN------------DELLREIGRLVGKLHK---AGIVHGDLTTSNIIVR-DDKLYLIDFGLGK 137 (199)
T ss_pred EEEEEECCccHHHHHhhcH------------HHHHHHHHHHHHHHHH---CCeecCCCCcceEEEE-CCcEEEEECCCCc
Confidence 9999999999999875421 1789999999999999 8999999999999999 7899999999876
Q ss_pred c
Q 006522 502 L 502 (642)
Q Consensus 502 ~ 502 (642)
.
T Consensus 138 ~ 138 (199)
T TIGR03724 138 Y 138 (199)
T ss_pred C
Confidence 4
No 427
>smart00090 RIO RIO-like kinase.
Probab=99.70 E-value=9.4e-17 Score=157.04 Aligned_cols=139 Identities=16% Similarity=0.192 Sum_probs=105.4
Q ss_pred ccccCccCCceeEEEE-ecCCCCCCCCeEEEEEEecCCCccc-----------------------cHHHHHHHHHHHhcc
Q 006522 347 AYVVGKSKNGIMYKVV-VGRGSGMGAPTVVAVRRLTEGDATW-----------------------RFKDFESEVEAIARV 402 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~-~~~~~~~~~~~~vavK~~~~~~~~~-----------------------~~~~~~~E~~~l~~l 402 (642)
...||+|++|.||+|. ....+ +.||||.++...... ....+.+|++++.++
T Consensus 33 ~~~Lg~G~~g~Vy~a~~~~~~g-----~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L 107 (237)
T smart00090 33 GGCISTGKEANVYHALDFDGSG-----KERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRL 107 (237)
T ss_pred CCeeccCcceeEEEEEecCCCC-----cEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 4689999999999998 33332 899999987542100 012357899999999
Q ss_pred cCCC--eeeEEEEEEeCCceEEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC-ceecCC
Q 006522 403 QHPN--IVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRK-YVHGNI 479 (642)
Q Consensus 403 ~H~n--Iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~-iiHrDl 479 (642)
.+.. +.+++++ ...++||||+++++|........ .+.......++.|++.+++|||+ .+ |+||||
T Consensus 108 ~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~~-----~~~~~~~~~i~~qi~~~l~~LH~---~g~iiH~Di 175 (237)
T smart00090 108 YEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKDV-----EPEEEEEFELYDDILEEMRKLYK---EGELVHGDL 175 (237)
T ss_pred HhcCCCCCeeeEe----cCceEEEEEecCCcccccccccC-----CcchHHHHHHHHHHHHHHHHHHh---cCCEEeCCC
Confidence 7633 3444443 23589999999988876543221 25556678899999999999999 78 999999
Q ss_pred CCCCeeeCCCCCeEEecccccccC
Q 006522 480 KSTKILLDDELHPCISGFGLNRLL 503 (642)
Q Consensus 480 kp~NILl~~~~~~kl~DfGla~~~ 503 (642)
||+||+++ ++.++|+|||.+...
T Consensus 176 kp~NIli~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 176 SEYNILVH-DGKVVIIDVSQSVEL 198 (237)
T ss_pred ChhhEEEE-CCCEEEEEChhhhcc
Confidence 99999999 889999999988653
No 428
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.70 E-value=9.9e-17 Score=176.78 Aligned_cols=135 Identities=14% Similarity=0.234 Sum_probs=108.1
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC-----ccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCce
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-----ATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEK 420 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 420 (642)
..+.||+|+||.||++...... ..+.++..+... .....+++.+|++++.+++|++|+....++...+..
T Consensus 337 ~~~~iG~G~~g~Vy~~~~~~~~-----~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~ 411 (535)
T PRK09605 337 PDHLIGKGAEADIKKGEYLGRD-----AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEK 411 (535)
T ss_pred ccceeccCCcEEEEEEeecCcc-----ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCC
Confidence 3578999999999998875542 222222111111 111235688999999999999999988888888888
Q ss_pred EEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEeccccc
Q 006522 421 LLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLN 500 (642)
Q Consensus 421 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla 500 (642)
++||||+++++|.+++. ....++.|++++|.|||+ .+++|||+||+|||+ +++.++|+|||++
T Consensus 412 ~lv~E~~~g~~L~~~l~-------------~~~~~~~~i~~~L~~lH~---~giiHrDlkp~NILl-~~~~~~liDFGla 474 (535)
T PRK09605 412 TIVMEYIGGKDLKDVLE-------------GNPELVRKVGEIVAKLHK---AGIVHGDLTTSNFIV-RDDRLYLIDFGLG 474 (535)
T ss_pred EEEEEecCCCcHHHHHH-------------HHHHHHHHHHHHHHHHHh---CCCccCCCChHHEEE-ECCcEEEEeCccc
Confidence 99999999999999875 346799999999999999 899999999999999 5789999999998
Q ss_pred cc
Q 006522 501 RL 502 (642)
Q Consensus 501 ~~ 502 (642)
+.
T Consensus 475 ~~ 476 (535)
T PRK09605 475 KY 476 (535)
T ss_pred cc
Confidence 64
No 429
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.68 E-value=5.8e-17 Score=181.00 Aligned_cols=191 Identities=17% Similarity=0.261 Sum_probs=150.3
Q ss_pred hcccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhccc---CCCeeeEEEEEEeCCceE
Q 006522 345 ASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQ---HPNIVRLKAFYYANDEKL 421 (642)
Q Consensus 345 ~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~---H~nIv~l~~~~~~~~~~~ 421 (642)
.....+|+|+||.||+|...++ +.||+|+-+..... +|..-.+++.||+ -+-|..+..++.-.+.-+
T Consensus 701 ~I~~e~G~g~y~~vy~a~~~~~------~~~alK~e~P~~~W----EfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~ 770 (974)
T KOG1166|consen 701 CISKEIGEGSYGSVYVATHSNG------KLVALKVEKPPNPW----EFYICLQVMERLKPQMLPSIMHISSAHVFQNASV 770 (974)
T ss_pred EEEeeeccccceEEEEeecCCC------cEEEEEeecCCCce----eeeehHHHHHhhchhhhcchHHHHHHHccCCcce
Confidence 3457899999999999999885 89999998765443 2333345556665 234555555566677889
Q ss_pred EEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeC-------CCCCeEE
Q 006522 422 LISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLD-------DELHPCI 494 (642)
Q Consensus 422 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~-------~~~~~kl 494 (642)
+|+||.+.|+|.+++... ..++|...+.+..|+++-+++||. .+|||+||||+|+||. +...++|
T Consensus 771 lv~ey~~~Gtlld~~N~~-----~~m~e~lv~~~~~qml~ive~lH~---~~IIHgDiKPDNfll~~~~~~~~~~~~l~l 842 (974)
T KOG1166|consen 771 LVSEYSPYGTLLDLINTN-----KVMDEYLVMFFSCQMLRIVEHLHA---MGIIHGDIKPDNFLLRREICADSDSKGLYL 842 (974)
T ss_pred eeeeccccccHHHhhccC-----CCCCchhhhHHHHHHHHHHHHHHh---cceecccCCcceeEeecccCCCCcccceEE
Confidence 999999999999999833 248999999999999999999999 8999999999999993 3567999
Q ss_pred ecccccccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCC
Q 006522 495 SGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRL 564 (642)
Q Consensus 495 ~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~ 564 (642)
+|||.+-.+.--. .++.....++|-.+-.+|. ..++.++..+|.|.+..+++-|+.|+.
T Consensus 843 IDfG~siDm~lfp----------~~~~F~~~~~td~f~C~EM-~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 843 IDFGRSIDMKLFP----------DGTKFKAVWHTDLFDCIEM-REGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred EecccceeeeEcC----------CCcEEeeeeccccchhHHH-hcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 9999886543211 1112234567788999998 566899999999999999999999874
No 430
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.67 E-value=5.8e-17 Score=177.30 Aligned_cols=215 Identities=20% Similarity=0.268 Sum_probs=140.2
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEe
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 425 (642)
+.+++..|++|.||.++++... +.+|.|+-++. -+.+- ++.....|.+|
T Consensus 87 ~IklisngAygavylvrh~~tr-----qrfa~kiNkq~-------lilRn--ilt~a~npfvv----------------- 135 (1205)
T KOG0606|consen 87 TIKLISNGAYGAVYLVRHKETR-----QRFAMKINKQN-------LILRN--ILTFAGNPFVV----------------- 135 (1205)
T ss_pred eeEeeccCCCCceeeeeccccc-----cchhhcccccc-------hhhhc--cccccCCccee-----------------
Confidence 4567888999999999988775 67787543321 11111 34444555554
Q ss_pred eccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCC
Q 006522 426 FIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPG 505 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 505 (642)
||-...+..-+ +++-.. +.+++|||+ .+|+|||+||+|.+|..-|++|+.|||+++..-.
T Consensus 136 ----gDc~tllk~~g-----~lPvdm--------vla~Eylh~---ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLm 195 (1205)
T KOG0606|consen 136 ----GDCATLLKNIG-----PLPVDM--------VLAVEYLHS---YGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLM 195 (1205)
T ss_pred ----chhhhhcccCC-----CCcchh--------hHHhHhhcc---CCeecCCCCCCcceeeecccccccchhhhhhhhh
Confidence 45544444322 233222 778999999 8999999999999999999999999999975422
Q ss_pred CCcccc-cce--eeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHH
Q 006522 506 TSKVTK-NET--IVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRK 582 (642)
Q Consensus 506 ~~~~~~-~~~--~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~ 582 (642)
...... ... ..+........+||+.|+|||++.. +.|+..+|.|++|+|+||.+.|..||++... .+++..
T Consensus 196 s~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilr-qgygkpvdwwamGiIlyeFLVgcvpffGdtp-----eelfg~ 269 (1205)
T KOG0606|consen 196 SLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILR-QGYGKPVDWWAMGIILYEFLVGCVPFFGDTP-----EELFGQ 269 (1205)
T ss_pred hccchhhhcchHHHHHHhhhccccCCccccChhhhhh-hccCCCccHHHHHHHHHHHheeeeeccCCCH-----HHHHhh
Confidence 111100 000 0011112235789999999999665 7899999999999999999999999986433 233333
Q ss_pred HHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCC
Q 006522 583 AFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRP 627 (642)
Q Consensus 583 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP 627 (642)
...+....++- |..+..+ +-+++...++.+|..|-
T Consensus 270 visd~i~wpE~-dea~p~E---------a~dli~~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 270 VISDDIEWPEE-DEALPPE---------AQDLIEQLLRQNPLCRL 304 (1205)
T ss_pred hhhhhcccccc-CcCCCHH---------HHHHHHHHHHhChHhhc
Confidence 33333333333 3333221 22355667888888884
No 431
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.66 E-value=4.8e-16 Score=148.79 Aligned_cols=135 Identities=15% Similarity=0.181 Sum_probs=105.5
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCcc---------------------ccHHHHHHHHHHHhcccC
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT---------------------WRFKDFESEVEAIARVQH 404 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~---------------------~~~~~~~~E~~~l~~l~H 404 (642)
..+.||+|+||.||++....+ +.||||++...... .....+.+|+.++.++.|
T Consensus 19 ~~~~i~~G~~g~Vy~~~~~~g------~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~ 92 (198)
T cd05144 19 LGNQIGVGKESDVYLALDPDG------NPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYE 92 (198)
T ss_pred cCCccccCcceEEEEEEcCCC------CEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHH
Confidence 357899999999999988655 79999987643210 001236789999999988
Q ss_pred CC--eeeEEEEEEeCCceEEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCC
Q 006522 405 PN--IVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKST 482 (642)
Q Consensus 405 ~n--Iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~ 482 (642)
++ +.+.++ ....++||||+++++|.+.... .....++.+++.++.++|+ .+|+||||||+
T Consensus 93 ~~i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~-----------~~~~~~~~~i~~~l~~lh~---~gi~H~Dl~p~ 154 (198)
T cd05144 93 EGFPVPKPID----WNRHAVVMEYIDGVELYRVRVL-----------EDPEEVLDEILEEIVKAYK---HGIIHGDLSEF 154 (198)
T ss_pred cCCCCCceee----cCCceEEEEEeCCcchhhcccc-----------ccHHHHHHHHHHHHHHHHH---CCCCcCCCCcc
Confidence 74 444444 2456899999999998765421 2345788999999999999 89999999999
Q ss_pred CeeeCCCCCeEEecccccccCC
Q 006522 483 KILLDDELHPCISGFGLNRLLP 504 (642)
Q Consensus 483 NILl~~~~~~kl~DfGla~~~~ 504 (642)
||++++++.++|+|||.+....
T Consensus 155 Nill~~~~~~~liDfg~~~~~~ 176 (198)
T cd05144 155 NILVDDDEKIYIIDWPQMVSTD 176 (198)
T ss_pred cEEEcCCCcEEEEECCccccCC
Confidence 9999999999999999986543
No 432
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.66 E-value=5.1e-17 Score=166.47 Aligned_cols=179 Identities=18% Similarity=0.315 Sum_probs=128.2
Q ss_pred ceEEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEeccc
Q 006522 419 EKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFG 498 (642)
Q Consensus 419 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfG 498 (642)
..|+.|++|+..+|.+||...... ...+|...+.++.|++.|++| ++.+|||+||.||....+..+||.|||
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~--e~~s~s~~~~~~~q~~~~~~y------k~~ihrdlkp~nif~~~d~q~kIgDFg 401 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTG--EERSLSLMLDIFKQIAPAVEY------KGLIHRDLKPSNIFFSDDDQLKIGDFG 401 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcc--cccchhHHHHHHHhhccchhh------ccchhhhccccccccccchhhhhhhhh
Confidence 478999999999999999765432 347788999999999999999 479999999999999999999999999
Q ss_pred ccccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCCcccHH
Q 006522 499 LNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDAGPENDGKGLE 577 (642)
Q Consensus 499 la~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~~~~~~~~~l~ 577 (642)
+......... ........+...||..||+||.+ .+..|+.|+||||+|++|+|+++ -..++...
T Consensus 402 l~ts~~~~~~------~~~~~a~~t~~~gt~~YmsPEQi-~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~-------- 466 (516)
T KOG1033|consen 402 LVTSQDKDET------VAPAAASHTQQVGTLLYMSPEQI-RGQQYSEKVDIYALGLILAELLIQFSTQFERI-------- 466 (516)
T ss_pred heeecccCCc------ccchhhhhhhcccccccCCHHHH-hhhhhhhhcchhhHHHHHHHHHHHhccHHHHH--------
Confidence 9877655431 00011112245799999999994 45899999999999999999998 33333210
Q ss_pred HHHHHHHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHH
Q 006522 578 SLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTV 632 (642)
Q Consensus 578 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev 632 (642)
..... .+ ...++|....+... -..+..+++...|.+||++.++
T Consensus 467 ~t~~d-~r-----~g~ip~~~~~d~p~------e~~ll~~lls~~p~~RP~~~~~ 509 (516)
T KOG1033|consen 467 ATLTD-IR-----DGIIPPEFLQDYPE------EYTLLQQLLSPSPEERPSAIEV 509 (516)
T ss_pred Hhhhh-hh-----cCCCChHHhhcCcH------HHHHHHHhcCCCcccCchHHHH
Confidence 00000 11 22333333322211 2347788999999999955544
No 433
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.63 E-value=3.3e-17 Score=179.66 Aligned_cols=252 Identities=21% Similarity=0.224 Sum_probs=182.6
Q ss_pred cccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCC-ccccHHHHHHHHHHHhccc-CCCeeeEEEEEEeCCceEEEEe
Q 006522 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD-ATWRFKDFESEVEAIARVQ-HPNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 348 ~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lv~e 425 (642)
.-||+|+|+.+-........ ...+|+|.+.... .....+....|..+-..+. |+|++++++.....+..+++.+
T Consensus 26 ~~ig~gs~~~~~~~~~~~~~----~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~~ 101 (601)
T KOG0590|consen 26 RSIGKGSFSSSALASNSRDP----ESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSLS 101 (601)
T ss_pred ccccccccchhhhhhhcCCC----cceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccccC
Confidence 34889999988877664442 1567777776543 2223355566888888886 9999999999999999999999
Q ss_pred eccCCcHHHHH-hcCCCCCCCCCCHHHHHHHHHHHHHHHHHHH-hcCCCCceecCCCCCCeeeCCCC-CeEEeccccccc
Q 006522 426 FIRNGSLYAAL-HAGPSDSLPPLPWEARLKIAQGTARGLMYIH-EYSPRKYVHGNIKSTKILLDDEL-HPCISGFGLNRL 502 (642)
Q Consensus 426 ~~~~gsL~~~l-~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH-~~~~~~iiHrDlkp~NILl~~~~-~~kl~DfGla~~ 502 (642)
|..+|++++.+ +.... ..+......+..|+..++.|+| + .++.|||+||+|.+++..+ ..|++|||+|..
T Consensus 102 ~s~g~~~f~~i~~~~~~----~~~~~~~~~~~~ql~s~l~~~H~~---~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~ 174 (601)
T KOG0590|consen 102 YSDGGSLFSKISHPDST----GTSSSSASRYLPQLNSGLSYLHPE---NGVTHRDIKPSNSLLDESGSALKIADFGLATA 174 (601)
T ss_pred cccccccccccccCCcc----CCCCcchhhhhhhhccCccccCcc---cccccCCCCCccchhccCCCcccCCCchhhcc
Confidence 99999999988 43321 2455667789999999999999 6 7999999999999999999 999999999987
Q ss_pred CCC-CCcccccceeeecCCCcccccC-CCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHH
Q 006522 503 LPG-TSKVTKNETIVTSGTGSRISAI-SNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLV 580 (642)
Q Consensus 503 ~~~-~~~~~~~~~~~~~~~~~~~~~g-t~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~ 580 (642)
+.. ... .......+| ++.|+|||.........+..|+||.|+++.-+++|..|++.+.........|.
T Consensus 175 ~~~~~g~----------~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~ 244 (601)
T KOG0590|consen 175 YRNKNGA----------ERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWK 244 (601)
T ss_pred ccccCCc----------ceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeec
Confidence 654 211 111123466 88999999866544567899999999999999999999987655443334443
Q ss_pred HHHHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHH
Q 006522 581 RKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVS 633 (642)
Q Consensus 581 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~ 633 (642)
............-++.. ..++..+++..+|..|.+.+++.
T Consensus 245 ~~~~~~~~~~~~~~~~~-------------~~~~l~k~l~~~~~~r~s~~~~~ 284 (601)
T KOG0590|consen 245 SNKGRFTQLPWNSISDQ-------------AHDLLHKILKENPSNRLSIEELK 284 (601)
T ss_pred ccccccccCccccCChh-------------hhhcccccccCCchhcccccccc
Confidence 33211111112222222 23345557878899998877654
No 434
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.62 E-value=5.5e-15 Score=144.88 Aligned_cols=138 Identities=20% Similarity=0.216 Sum_probs=107.2
Q ss_pred hcccccC-ccCCceeEEEEecCCCCCCCCeEEEEEEecCCC------------ccccHHHHHHHHHHHhcccCCCe--ee
Q 006522 345 ASAYVVG-KSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGD------------ATWRFKDFESEVEAIARVQHPNI--VR 409 (642)
Q Consensus 345 ~~~~~lg-~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~------------~~~~~~~~~~E~~~l~~l~H~nI--v~ 409 (642)
..++++| .|+.|+||.+.... ..++||+..... .......+.+|++++.+++|++| ++
T Consensus 34 ~~~~~lg~~~g~gtv~~v~~~~-------~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~ 106 (239)
T PRK01723 34 QQARVVGSAKGRGTTWFVQTPG-------VNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPR 106 (239)
T ss_pred hcCceeecCCCCccEEEEEeCC-------ceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCce
Confidence 4568898 89999999998863 578888775321 01223568899999999998875 67
Q ss_pred EEEEEEeCC----ceEEEEeeccC-CcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCe
Q 006522 410 LKAFYYAND----EKLLISDFIRN-GSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKI 484 (642)
Q Consensus 410 l~~~~~~~~----~~~lv~e~~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NI 484 (642)
.+++..... ..++||||+++ .+|.+++... +++.. .+.+++.+|.+||+ .+|+||||||+||
T Consensus 107 pl~~~~~~~~~~~~~~lV~e~l~G~~~L~~~l~~~------~l~~~----~~~~i~~~l~~lH~---~GI~HrDlkp~NI 173 (239)
T PRK01723 107 PIAARVVRHGLFYRADILIERIEGARDLVALLQEA------PLSEE----QWQAIGQLIARFHD---AGVYHADLNAHNI 173 (239)
T ss_pred eEeeeeeecCcceeeeEEEEecCCCCCHHHHHhcC------CCCHH----HHHHHHHHHHHHHH---CCCCCCCCCchhE
Confidence 777755432 23599999997 6999888642 24433 36789999999999 8999999999999
Q ss_pred eeCCCCCeEEeccccccc
Q 006522 485 LLDDELHPCISGFGLNRL 502 (642)
Q Consensus 485 Ll~~~~~~kl~DfGla~~ 502 (642)
|++.++.++|+|||.++.
T Consensus 174 Lv~~~~~v~LIDfg~~~~ 191 (239)
T PRK01723 174 LLDPDGKFWLIDFDRGEL 191 (239)
T ss_pred EEcCCCCEEEEECCCccc
Confidence 999988999999998764
No 435
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.61 E-value=2.6e-17 Score=143.80 Aligned_cols=152 Identities=28% Similarity=0.423 Sum_probs=135.9
Q ss_pred CCCEeEEEcCCCCccccCCccccCCCCCCEEEccCCCCCCccccccccCCccceeeccCCcccccCcccccCCCCcCeEe
Q 006522 64 RNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLD 143 (642)
Q Consensus 64 ~~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 143 (642)
.+.+|.|.|++|.++ .+|+.+..|.+|+.|++++|++. .+|..++.++.|+.|+++-|++. .+|..|+.++.|+.||
T Consensus 32 ~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levld 108 (264)
T KOG0617|consen 32 MSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLD 108 (264)
T ss_pred hhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhhh
Confidence 357899999999999 67889999999999999999997 58999999999999999999998 8999999999999999
Q ss_pred cccccCC-CcchhHhhhhccccceeecccccccccCCcccCCCCCCcEEEeecCCCCCCcCccccccccCCcccCCCC
Q 006522 144 LSSNLLN-GSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNP 220 (642)
Q Consensus 144 Ls~N~l~-~~~p~~~~~l~~l~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~ 220 (642)
|++|+++ ..+|..|..+..|. .|+|++|.|. .+|..++++++|+.|.+..|.|-..+-.++.+..+..+-+.||.
T Consensus 109 ltynnl~e~~lpgnff~m~tlr-alyl~dndfe-~lp~dvg~lt~lqil~lrdndll~lpkeig~lt~lrelhiqgnr 184 (264)
T KOG0617|consen 109 LTYNNLNENSLPGNFFYMTTLR-ALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLLSLPKEIGDLTRLRELHIQGNR 184 (264)
T ss_pred ccccccccccCCcchhHHHHHH-HHHhcCCCcc-cCChhhhhhcceeEEeeccCchhhCcHHHHHHHHHHHHhcccce
Confidence 9999996 56899999999999 8999999997 78889999999999999999987665566667777777778875
No 436
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.59 E-value=9.5e-15 Score=133.04 Aligned_cols=133 Identities=17% Similarity=0.149 Sum_probs=112.1
Q ss_pred cccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccC--CCeeeEEEEEEeCCceEEEEe
Q 006522 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQH--PNIVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 348 ~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H--~nIv~l~~~~~~~~~~~lv~e 425 (642)
+.+|+|.++.||++.... ..+++|....... ...+.+|+.++..++| .+++++++++...+..+++||
T Consensus 4 ~~i~~g~~~~v~~~~~~~-------~~~~iK~~~~~~~---~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e 73 (155)
T cd05120 4 KLLKGGLTNRVYLLGTKD-------EDYVLKINPSREK---GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLME 73 (155)
T ss_pred eecccccccceEEEEecC-------CeEEEEecCCCCc---hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEE
Confidence 468999999999999754 5789998866433 3678999999999976 589999998888888999999
Q ss_pred eccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEeccccccc
Q 006522 426 FIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRL 502 (642)
Q Consensus 426 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~ 502 (642)
|++++.+..+ ++.....++.+++++++++|.....+++|+|+||+||++++.+.+++.|||.++.
T Consensus 74 ~~~g~~~~~~------------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 74 WIEGETLDEV------------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred ecCCeecccC------------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 9998776543 4466778899999999999985434799999999999999989999999998764
No 437
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.55 E-value=3e-14 Score=135.06 Aligned_cols=137 Identities=20% Similarity=0.264 Sum_probs=97.3
Q ss_pred cccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccc-cHHH----------------------HHHHHHHHhcccC
Q 006522 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATW-RFKD----------------------FESEVEAIARVQH 404 (642)
Q Consensus 348 ~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~----------------------~~~E~~~l~~l~H 404 (642)
..||+|+||.||++....+ ..||||++....... .... ...|.+.+.++.+
T Consensus 3 ~~lg~G~~g~Vy~a~~~~~------~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~ 76 (187)
T cd05119 3 GPIGTGKEADVYLALDGDG------EPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYE 76 (187)
T ss_pred cccccccceeEEEEECCCC------CEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHH
Confidence 5789999999999998744 789999987542111 0011 1356677777754
Q ss_pred CC--eeeEEEEEEeCCceEEEEeeccCCcHHHH-HhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCC
Q 006522 405 PN--IVRLKAFYYANDEKLLISDFIRNGSLYAA-LHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKS 481 (642)
Q Consensus 405 ~n--Iv~l~~~~~~~~~~~lv~e~~~~gsL~~~-l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp 481 (642)
.. +.+.+++ ...++||||++++.+... +.... .. .....++.+++.++.++|.. .+|+||||||
T Consensus 77 ~~~~~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~------~~-~~~~~~~~~~~~~l~~lh~~--~~ivH~Dl~p 143 (187)
T cd05119 77 AGVPVPKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR------LL-EDPEELYDQILELMRKLYRE--AGLVHGDLSE 143 (187)
T ss_pred cCCCCCceEec----CCCEEEEEEeCCCCccChhhhhhh------hc-ccHHHHHHHHHHHHHHHhhc--cCcCcCCCCh
Confidence 43 4444443 346899999999654321 11110 11 45678999999999999973 5899999999
Q ss_pred CCeeeCCCCCeEEecccccccCC
Q 006522 482 TKILLDDELHPCISGFGLNRLLP 504 (642)
Q Consensus 482 ~NILl~~~~~~kl~DfGla~~~~ 504 (642)
+||+++ ++.++++|||.+....
T Consensus 144 ~Nili~-~~~~~liDfg~a~~~~ 165 (187)
T cd05119 144 YNILVD-DGKVYIIDVPQAVEID 165 (187)
T ss_pred hhEEEE-CCcEEEEECccccccc
Confidence 999999 8999999999986543
No 438
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.53 E-value=1.4e-16 Score=139.18 Aligned_cols=138 Identities=24% Similarity=0.359 Sum_probs=127.5
Q ss_pred CEeEEEcCCCCccccCCccccCCCCCCEEEccCCCCCCccccccccCCccceeeccCCccc-ccCcccccCCCCcCeEec
Q 006522 66 RVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFC-GPIPDRIKTLKNLTHLDL 144 (642)
Q Consensus 66 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L 144 (642)
.+..|++.+|++. .+|.+++.|+.|+.|+++-|++. ..|..|+.++.|+.|||..|+++ ..+|..|..|+.|+.|+|
T Consensus 57 nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levldltynnl~e~~lpgnff~m~tlralyl 134 (264)
T KOG0617|consen 57 NLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLDLTYNNLNENSLPGNFFYMTTLRALYL 134 (264)
T ss_pred hhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhhhccccccccccCCcchhHHHHHHHHHh
Confidence 5678899999998 57899999999999999999997 79999999999999999999997 467999999999999999
Q ss_pred ccccCCCcchhHhhhhccccceeecccccccccCCcccCCCCCCcEEEeecCCCCCCcCccccc
Q 006522 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSL 208 (642)
Q Consensus 145 s~N~l~~~~p~~~~~l~~l~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~ 208 (642)
+.|.|. .+|..++++++|+ .|.+..|.+- ++|.+++.+++|++|++.+|.|+-.+|.++.+
T Consensus 135 ~dndfe-~lp~dvg~lt~lq-il~lrdndll-~lpkeig~lt~lrelhiqgnrl~vlppel~~l 195 (264)
T KOG0617|consen 135 GDNDFE-ILPPDVGKLTNLQ-ILSLRDNDLL-SLPKEIGDLTRLRELHIQGNRLTVLPPELANL 195 (264)
T ss_pred cCCCcc-cCChhhhhhccee-EEeeccCchh-hCcHHHHHHHHHHHHhcccceeeecChhhhhh
Confidence 999999 8999999999999 9999999997 78999999999999999999999888866543
No 439
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.45 E-value=2.4e-14 Score=141.10 Aligned_cols=160 Identities=22% Similarity=0.256 Sum_probs=117.2
Q ss_pred CCEeEEEcCCCCccccCCccccCCCCCCEEEccCCCCCCccccccccCCccceeeccC-CcccccCccccc---------
Q 006522 65 NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAH-NSFCGPIPDRIK--------- 134 (642)
Q Consensus 65 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~--------- 134 (642)
...+.|+|..|+++...|.+|+.+++|+.||||+|+|+.+-|.+|.++.+|..|-+-+ |+|+...-..|.
T Consensus 67 ~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLl 146 (498)
T KOG4237|consen 67 PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLL 146 (498)
T ss_pred CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHh
Confidence 3568899999999988889999999999999999999998899998888777665544 766532222232
Q ss_pred --------------------------------------------------------------------------------
Q 006522 135 -------------------------------------------------------------------------------- 134 (642)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (642)
T Consensus 147 lNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~ 226 (498)
T KOG4237|consen 147 LNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCV 226 (498)
T ss_pred cChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhchhhcccceec
Confidence
Q ss_pred ---------------------------------------------CCCCcCeEecccccCCCcchhHhhhhccccceeec
Q 006522 135 ---------------------------------------------TLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNL 169 (642)
Q Consensus 135 ---------------------------------------------~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~l~l 169 (642)
+|++|+.|+|++|.+++.-+.+|..+..++ .|.|
T Consensus 227 ~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~-eL~L 305 (498)
T KOG4237|consen 227 SPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQ-ELYL 305 (498)
T ss_pred chHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhh-hhhc
Confidence 223566677777777666666666666666 6667
Q ss_pred ccccccccCCcccCCCCCCcEEEeecCCCCCCcCccc-cccccCCcccCCCCCCCCC
Q 006522 170 SFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVG-SLLNQGPTAFSGNPGLCGF 225 (642)
Q Consensus 170 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~-~~~~~~~~~~~~n~~~~~~ 225 (642)
..|+|...-...|.++..|++|+|.+|+|+-.-|... .+..+..+.+.+||+.|..
T Consensus 306 ~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC 362 (498)
T KOG4237|consen 306 TRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNC 362 (498)
T ss_pred CcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCcc
Confidence 7776665555567778888888888888887766432 2334566677889988864
No 440
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.44 E-value=1.7e-13 Score=132.18 Aligned_cols=160 Identities=19% Similarity=0.324 Sum_probs=116.2
Q ss_pred HHHHHhcccCCCeeeEEEEEEeCC-----ceEEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc
Q 006522 395 EVEAIARVQHPNIVRLKAFYYAND-----EKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEY 469 (642)
Q Consensus 395 E~~~l~~l~H~nIv~l~~~~~~~~-----~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~ 469 (642)
=..-+-++.|.|||+++.|+.+.. ...++.|||+.|++.++|++..+.. ..+....-.+|+-||..||.|||+.
T Consensus 117 vFdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~-~a~~~~~wkkw~tqIlsal~yLhs~ 195 (458)
T KOG1266|consen 117 VFDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQ-KALFQKAWKKWCTQILSALSYLHSC 195 (458)
T ss_pred HHHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhh-hhhhHHHHHHHHHHHHhhhhhhhcc
Confidence 345567778999999999986543 4689999999999999998765432 2367777789999999999999984
Q ss_pred CCCCceecCCCCCCeeeCCCCCeEEecccccccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccch
Q 006522 470 SPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDV 549 (642)
Q Consensus 470 ~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV 549 (642)
.++|+|+++..+-|.+..++-+|+.----.. ..... .. +.........+-++|.|||+-. ....+.++||
T Consensus 196 -~PpiihgnlTc~tifiq~ngLIkig~~ap~s-~h~s~--~~-----~~~~Ek~~~~~~~g~~a~~sg~-~tn~~~a~dI 265 (458)
T KOG1266|consen 196 -DPPIIHGNLTCDTIFIQHNGLIKIGSVAPDS-THPSV--NS-----TREAEKSVNTSLPGFSAPESGT-TTNTTGASDI 265 (458)
T ss_pred -CCccccCCcchhheeecCCceEEecccCccc-cchhh--hh-----hhHhhhhccccCCccccCCcCc-ccccccchhh
Confidence 4799999999999999999888875321110 00000 00 0000111233556799999732 2566789999
Q ss_pred HHHHHHHHHHHhCCCC
Q 006522 550 YSFGIVLLEILTGRLP 565 (642)
Q Consensus 550 ~S~Gvvl~el~tG~~P 565 (642)
|+||...+||..+..-
T Consensus 266 y~fgmcAlemailEiq 281 (458)
T KOG1266|consen 266 YKFGMCALEMAILEIQ 281 (458)
T ss_pred hhhhHHHHHHHHheec
Confidence 9999999999988753
No 441
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.43 E-value=1.5e-14 Score=148.64 Aligned_cols=146 Identities=26% Similarity=0.252 Sum_probs=98.4
Q ss_pred CCCccccCCccccCCCCCCEEEccCCCCCCccccccccCCccceeeccCCcccccCcccccCCCCcCeEecccccCCCcc
Q 006522 74 NRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSL 153 (642)
Q Consensus 74 ~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 153 (642)
.|+++..-...|..+.++++|+|+.|+++..--..+++|+.|+.|+||+|.+....++.+....+|++||||+|+++...
T Consensus 254 rN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~ 333 (873)
T KOG4194|consen 254 RNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLD 333 (873)
T ss_pred hcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCC
Confidence 33333333445556667777777777777666666777777777777777777777777777777888888888877666
Q ss_pred hhHhhhhccccceeecccccccccCCcccCCCCCCcEEEeecCCCCCCcCcc----ccccccCCcccCCCC
Q 006522 154 PEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQV----GSLLNQGPTAFSGNP 220 (642)
Q Consensus 154 p~~~~~l~~l~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~----~~~~~~~~~~~~~n~ 220 (642)
+.+|..|.+|+ +|+|++|.++..--..|..+++|+.|||++|.|++.+.+. ..+..+..+.+.||.
T Consensus 334 ~~sf~~L~~Le-~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNq 403 (873)
T KOG4194|consen 334 EGSFRVLSQLE-ELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQ 403 (873)
T ss_pred hhHHHHHHHhh-hhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCce
Confidence 77777777777 7777777777655566777777777777777777666542 123334444455553
No 442
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.42 E-value=1.4e-14 Score=149.85 Aligned_cols=151 Identities=32% Similarity=0.383 Sum_probs=75.1
Q ss_pred CEeEEEcCCCCccccCCccccCCCCCCEEEccCCCCCCccccccccCCccceeeccCCccc-ccCcccccCCCCcCeEec
Q 006522 66 RVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFC-GPIPDRIKTLKNLTHLDL 144 (642)
Q Consensus 66 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L 144 (642)
+++.|-|...+|. .+|++++.|.+|+.|.+++|+|.. +-.++..|+.|+.+++.+|+|. .-+|..+..|..|+.|||
T Consensus 33 ~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~~-vhGELs~Lp~LRsv~~R~N~LKnsGiP~diF~l~dLt~lDL 110 (1255)
T KOG0444|consen 33 QMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLIS-VHGELSDLPRLRSVIVRDNNLKNSGIPTDIFRLKDLTILDL 110 (1255)
T ss_pred heeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhHh-hhhhhccchhhHHHhhhccccccCCCCchhcccccceeeec
Confidence 4555555555544 345555555555555555555542 3334455555555555555543 224444555555555555
Q ss_pred ccccCCCcchhHhhhhccccceeecccccccccCCcccCCCCCCcEEEeecCCCCCCcCccccccccCCcccCCCC
Q 006522 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNP 220 (642)
Q Consensus 145 s~N~l~~~~p~~~~~l~~l~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~ 220 (642)
|+|+|. ..|..+...+++. .|+||+|+|..++-..|.+++.|-.||||+|.|...+|+...+..+..+.+++||
T Consensus 111 ShNqL~-EvP~~LE~AKn~i-VLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe~LPPQ~RRL~~LqtL~Ls~NP 184 (1255)
T KOG0444|consen 111 SHNQLR-EVPTNLEYAKNSI-VLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLEMLPPQIRRLSMLQTLKLSNNP 184 (1255)
T ss_pred chhhhh-hcchhhhhhcCcE-EEEcccCccccCCchHHHhhHhHhhhccccchhhhcCHHHHHHhhhhhhhcCCCh
Confidence 555554 4455554444444 5555555554322233445555555555555555555544444444444444443
No 443
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.40 E-value=2e-14 Score=141.68 Aligned_cols=152 Identities=32% Similarity=0.432 Sum_probs=131.4
Q ss_pred CEeEEEcCCCCccccCCccccCCCCCCEE-EccCCCCCCccccccccCCccceeeccCCcccccCcccccCCCCcCeEec
Q 006522 66 RVTSLYLPNRNLTGYMPSELGLLNSLTRL-SLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (642)
Q Consensus 66 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L-~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 144 (642)
-|+.++++.|++. .+|..+..+..+.+. .+++|.+ +.+|..+..+++|..|+|++|-+. .+|..++.+..|+.|||
T Consensus 389 ~Vt~VnfskNqL~-elPk~L~~lkelvT~l~lsnn~i-sfv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~Lnl 465 (565)
T KOG0472|consen 389 IVTSVNFSKNQLC-ELPKRLVELKELVTDLVLSNNKI-SFVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNL 465 (565)
T ss_pred ceEEEecccchHh-hhhhhhHHHHHHHHHHHhhcCcc-ccchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecc
Confidence 4899999999998 568777777776654 5555555 578889999999999999999998 79999999999999999
Q ss_pred ccccCCCcchhHhhhhccccceeecccccccccCCcccCCCCCCcEEEeecCCCCCCcCccccccccCCcccCCCCCC
Q 006522 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGL 222 (642)
Q Consensus 145 s~N~l~~~~p~~~~~l~~l~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~~ 222 (642)
|.|+|. .+|..+..+..++ .+-.++||+....|+.+.+|.+|.+|||.+|.|...+|.++.+.++..+.+.|||+.
T Consensus 466 S~NrFr-~lP~~~y~lq~lE-tllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 466 SFNRFR-MLPECLYELQTLE-TLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQQIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred cccccc-cchHHHhhHHHHH-HHHhccccccccChHHhhhhhhcceeccCCCchhhCChhhccccceeEEEecCCccC
Confidence 999998 8999988888887 777778999866666699999999999999999999999999999999999999853
No 444
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.39 E-value=1.4e-12 Score=139.05 Aligned_cols=141 Identities=18% Similarity=0.227 Sum_probs=101.9
Q ss_pred cccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCcccc---------------------------------------
Q 006522 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWR--------------------------------------- 388 (642)
Q Consensus 348 ~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~--------------------------------------- 388 (642)
..||.|++|.||+|++.+| +.||||+.+......-
T Consensus 123 ~plasaSigQVh~A~l~~G------~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ 196 (437)
T TIGR01982 123 KPLAAASIAQVHRARLVDG------KEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRR 196 (437)
T ss_pred cceeeeehhheEEEEecCC------CEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHH
Confidence 5799999999999999877 8999999865421000
Q ss_pred HHHHHHHHHHHhccc-----CCCeeeEEEEEE-eCCceEEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHH-
Q 006522 389 FKDFESEVEAIARVQ-----HPNIVRLKAFYY-ANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTAR- 461 (642)
Q Consensus 389 ~~~~~~E~~~l~~l~-----H~nIv~l~~~~~-~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~- 461 (642)
.-+|.+|+..+.+++ +++| .+-..+. .....++||||++|++|.++....... . .+..++..++.
T Consensus 197 Eldf~~Ea~n~~~~~~~~~~~~~v-~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~----~---~~~~ia~~~~~~ 268 (437)
T TIGR01982 197 ELDLRREAANASELGENFKNDPGV-YVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAG----L---DRKALAENLARS 268 (437)
T ss_pred HHCHHHHHHHHHHHHHhcCCCCCE-EeCCEehhhcCCceEEEEeECCcccccHHHHHhcC----C---CHHHHHHHHHHH
Confidence 013566777777663 3443 3323332 234679999999999998876532211 2 23456666666
Q ss_pred HHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCC
Q 006522 462 GLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPG 505 (642)
Q Consensus 462 gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 505 (642)
.+..+|. .+++|+|+||.||++++++.+++.|||++..+..
T Consensus 269 ~l~ql~~---~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 269 FLNQVLR---DGFFHADLHPGNIFVLKDGKIIALDFGIVGRLSE 309 (437)
T ss_pred HHHHHHh---CCceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence 4678888 7999999999999999999999999999987653
No 445
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.39 E-value=8.2e-15 Score=144.41 Aligned_cols=146 Identities=26% Similarity=0.361 Sum_probs=120.0
Q ss_pred EeEEEcCCCCccccCCccccCCCCCCEEEccCCCCCCccccccccCCccceeeccCCcccccCcccccCCCCcCeEeccc
Q 006522 67 VTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSS 146 (642)
Q Consensus 67 v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 146 (642)
++.+++.+|.+....|..+ +++.|+.||...|-+. .+|++++.+.+|.-|||.+|++. .+| .|.+++.|.+|+++.
T Consensus 162 l~~l~~~~n~l~~l~~~~i-~m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~ 237 (565)
T KOG0472|consen 162 LSKLDLEGNKLKALPENHI-AMKRLKHLDCNSNLLE-TLPPELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGE 237 (565)
T ss_pred HHHhhccccchhhCCHHHH-HHHHHHhcccchhhhh-cCChhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcc
Confidence 4456666666664444333 3777888888888774 68888888888888888888887 566 788888888899988
Q ss_pred ccCCCcchhHhh-hhccccceeecccccccccCCcccCCCCCCcEEEeecCCCCCCcCccccccccCCcccCCCC
Q 006522 147 NLLNGSLPEFLL-DLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNP 220 (642)
Q Consensus 147 N~l~~~~p~~~~-~l~~l~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~ 220 (642)
|+++ .+|.... +++.+. .|||.+|++. ..|+.+.-+.+|+.||+|+|.|++.++.++.+ .+..+.+.|||
T Consensus 238 N~i~-~lpae~~~~L~~l~-vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is~Lp~sLgnl-hL~~L~leGNP 308 (565)
T KOG0472|consen 238 NQIE-MLPAEHLKHLNSLL-VLDLRDNKLK-EVPDEICLLRSLERLDLSNNDISSLPYSLGNL-HLKFLALEGNP 308 (565)
T ss_pred cHHH-hhHHHHhcccccce-eeeccccccc-cCchHHHHhhhhhhhcccCCccccCCcccccc-eeeehhhcCCc
Confidence 8888 7777665 899998 9999999998 78999999999999999999999999988777 67788889998
No 446
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.37 E-value=6.5e-14 Score=144.93 Aligned_cols=79 Identities=34% Similarity=0.450 Sum_probs=40.8
Q ss_pred cccccCCCCcCeEecccccCCCcchhHhhhhccccceeecccccccccCCcccCCCCCCcEEEeecCCCCCCcCcccccc
Q 006522 130 PDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLL 209 (642)
Q Consensus 130 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~ 209 (642)
|..+..|.+|..+|||.|+|. .+|+.+..+.+|. .|+||+|+|+ .+....+...+|++|+||.|+|+..+..+..+.
T Consensus 215 Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~Lr-rLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt~LP~avcKL~ 291 (1255)
T KOG0444|consen 215 PTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLR-RLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLTVLPDAVCKLT 291 (1255)
T ss_pred CCchhhhhhhhhccccccCCC-cchHHHhhhhhhh-eeccCcCcee-eeeccHHHHhhhhhhccccchhccchHHHhhhH
Confidence 334444445555555555555 4555555555555 5666666555 333334445556666666666664433333444
Q ss_pred cc
Q 006522 210 NQ 211 (642)
Q Consensus 210 ~~ 211 (642)
++
T Consensus 292 kL 293 (1255)
T KOG0444|consen 292 KL 293 (1255)
T ss_pred HH
Confidence 43
No 447
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.37 E-value=3.4e-13 Score=138.93 Aligned_cols=151 Identities=23% Similarity=0.301 Sum_probs=114.9
Q ss_pred CCCCCCceeeEecC----------------CCEeEEEcCCCCccccCCccccCCCCCCEEEccCCCCCCccccccccCCc
Q 006522 51 DSTPCHWSGIHCIR----------------NRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATN 114 (642)
Q Consensus 51 ~~~~c~w~gv~c~~----------------~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 114 (642)
.+|+|.-.-..|.. ..+..|+|++|.|+..-+..|-+|++|+.++|.+|.|+ .||.......+
T Consensus 48 a~c~c~~~lldcs~~~lea~~~~~l~g~lp~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sgh 126 (873)
T KOG4194|consen 48 ATCPCNTRLLDCSDRELEAIDKSRLKGFLPSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGH 126 (873)
T ss_pred CcCCCCceeeecCccccccccccccCCcCccceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccc
Confidence 35666666667753 34567999999999888889999999999999999997 58865555666
Q ss_pred cceeeccCCcccccCcccccCCCCcCeEecccccCCCcchhHhhhhccccceeecccccccccCCcccCCCCCCcEEEee
Q 006522 115 LVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLR 194 (642)
Q Consensus 115 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~ 194 (642)
|+.|+|.+|.++..-.+.+.-++.|+.||||.|.++-.--.+|..-.+++ +|+|++|.|+..-...|.++.+|.+|.|+
T Consensus 127 l~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~-~L~La~N~It~l~~~~F~~lnsL~tlkLs 205 (873)
T KOG4194|consen 127 LEKLDLRHNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIK-KLNLASNRITTLETGHFDSLNSLLTLKLS 205 (873)
T ss_pred eeEEeeeccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCce-EEeeccccccccccccccccchheeeecc
Confidence 99999999998877777888888888888888888733333444445666 77777777776666677777777777777
Q ss_pred cCCCCCCcC
Q 006522 195 NNNLSGEIP 203 (642)
Q Consensus 195 ~N~l~~~~p 203 (642)
+|.++-.++
T Consensus 206 rNrittLp~ 214 (873)
T KOG4194|consen 206 RNRITTLPQ 214 (873)
T ss_pred cCcccccCH
Confidence 777776544
No 448
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.28 E-value=2.8e-11 Score=112.66 Aligned_cols=129 Identities=19% Similarity=0.191 Sum_probs=94.7
Q ss_pred cccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCee-eEEEEEEeCCceEEEEee
Q 006522 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIV-RLKAFYYANDEKLLISDF 426 (642)
Q Consensus 348 ~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv-~l~~~~~~~~~~~lv~e~ 426 (642)
..++.|.++.||++... + ..+++|........ ...+.+|+.++..+.+.+++ +++.+. ....++||||
T Consensus 4 ~~l~~G~~~~vy~~~~~-~------~~~~lK~~~~~~~~--~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~ 72 (170)
T cd05151 4 SPLKGGMTNKNYRVEVA-N------KKYVVRIPGNGTEL--LINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEF 72 (170)
T ss_pred eecCCcccCceEEEEEC-C------eEEEEEeCCCCccc--ccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEe
Confidence 35788999999999865 2 67999987654321 14567899999999765554 444443 3346899999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC--CCCceecCCCCCCeeeCCCCCeEEecccccc
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYS--PRKYVHGNIKSTKILLDDELHPCISGFGLNR 501 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~--~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 501 (642)
+++.++.+. . .....++.+++++|+.||+.. +..++|+|++|.||+++ ++.+++.|||.+.
T Consensus 73 i~G~~l~~~----~---------~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 73 IEGSELLTE----D---------FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred cCCCccccc----c---------ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 999887643 0 011346788999999999832 12369999999999999 6689999999864
No 449
>PLN03150 hypothetical protein; Provisional
Probab=99.27 E-value=1.3e-11 Score=137.85 Aligned_cols=116 Identities=36% Similarity=0.675 Sum_probs=99.5
Q ss_pred cceeeccCCcccccCcccccCCCCcCeEecccccCCCcchhHhhhhccccceeecccccccccCCcccCCCCCCcEEEee
Q 006522 115 LVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLR 194 (642)
Q Consensus 115 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~ 194 (642)
++.|+|++|.++|.+|..+..|++|+.|+|++|.|+|.+|..+..++.|+ .|+|++|+|+|.+|+.++++++|+.|+|+
T Consensus 420 v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~-~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLE-VLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCC-EEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 77899999999999999999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred cCCCCCCcCcccc--ccccCCcccCCCCCCCCCCCCCCC
Q 006522 195 NNNLSGEIPQVGS--LLNQGPTAFSGNPGLCGFPLQSPC 231 (642)
Q Consensus 195 ~N~l~~~~p~~~~--~~~~~~~~~~~n~~~~~~~~~~~c 231 (642)
+|+|+|.+|.... ..+.....+.+|+++|+.|....|
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p~l~~C 537 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIPGLRAC 537 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccccCCCCCCCC
Confidence 9999999985321 123445678999999986643344
No 450
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.23 E-value=2.3e-11 Score=127.74 Aligned_cols=259 Identities=17% Similarity=0.161 Sum_probs=171.9
Q ss_pred cHHHHHhhcccccCc--cCCceeEEEEecCCCCCCCCeEEEEEEecCCCc-cccHHHHHHHHHHHhcc-cCCCeeeEEEE
Q 006522 338 ELEDLLRASAYVVGK--SKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDA-TWRFKDFESEVEAIARV-QHPNIVRLKAF 413 (642)
Q Consensus 338 ~~~~~~~~~~~~lg~--g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~~~ 413 (642)
+..+-......-+|. |.+|.+|.+.... ......+|+|+-+..-. .....+=.+|+....++ .|+|.|+.+..
T Consensus 110 s~~~~~~~~~~~~g~~~g~~~s~~~~~~~~---~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~ 186 (524)
T KOG0601|consen 110 SFFDQRFPISSRTGSLPGSKGSVFKSRCTN---SESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPA 186 (524)
T ss_pred chhhhhcccccccccCCCCCceeecccCCc---ccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcc
Confidence 333333345567888 9999999998732 11227888888443311 11112234677777777 69999998888
Q ss_pred EEeCCceEEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHH----HHHHHHhcCCCCceecCCCCCCeeeCCC
Q 006522 414 YYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTAR----GLMYIHEYSPRKYVHGNIKSTKILLDDE 489 (642)
Q Consensus 414 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~----gL~yLH~~~~~~iiHrDlkp~NILl~~~ 489 (642)
+...+..++-.|++. .+|.++.+.... .++....+.+..+..+ |+.++|+ ..++|-|+||.||.+..+
T Consensus 187 ~e~~~~lfiqtE~~~-~sl~~~~~~~~~----~~p~~~l~~~~~~~~~~~~~al~~~hs---~~~~~~~~kp~~i~~~~~ 258 (524)
T KOG0601|consen 187 WEGSGILFIQTELCG-ESLQSYCHTPCN----FLPDNLLWNSLRDWLSRDVTALSHLHS---NNIVHDDLKPANIFTTSD 258 (524)
T ss_pred cccCCcceeeecccc-chhHHhhhcccc----cCCchhhhhHHhhhhhcccccccccCC---Ccccccccchhheecccc
Confidence 888899999999885 688888876543 2555666666666666 9999999 899999999999999988
Q ss_pred -CCeEEecccccccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCC
Q 006522 490 -LHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAG 568 (642)
Q Consensus 490 -~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~ 568 (642)
...++.|||+...+............ -..-|...|++||. .. ..++..+|+||+|.+..|..++......
T Consensus 259 ~~s~~~~df~~v~~i~~~~~~~~~~~~-------~r~~~~~~Y~~ke~-~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~ 329 (524)
T KOG0601|consen 259 WTSCKLTDFGLVSKISDGNFSSVFKVS-------KRPEGDCIYAAKEL-LN-GLATFASDIFSLGEVILEAILGSHLPSV 329 (524)
T ss_pred cceeecCCcceeEEccCCccccceeee-------ecCCCCceEeChhh-hc-cccchHhhhcchhhhhHhhHhhcccccC
Confidence 99999999998877654322111100 01134556999997 33 6789999999999999999998776543
Q ss_pred CCCCcccHHHHHHHHHhccCCCccccChhhhhchhHHHHHHHHHHHHHhcCCCCCCCCCCHHHHH
Q 006522 569 PENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATFHIALNCTELDPEFRPRMRTVS 633 (642)
Q Consensus 569 ~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ev~ 633 (642)
..... |.+ .+... +-.++.+... .++-.....+++.+|..|++.+++.
T Consensus 330 g~~~~-----W~~-----~r~~~--ip~e~~~~~s-----~~l~~~~~~~~d~~~~~~~~~q~~~ 377 (524)
T KOG0601|consen 330 GKNSS-----WSQ-----LRQGY--IPLEFCEGGS-----SSLRSVTSQMLDEDPRLRLTAQILT 377 (524)
T ss_pred CCCCC-----ccc-----ccccc--CchhhhcCcc-----hhhhhHHHHhcCcchhhhhHHHHHh
Confidence 21111 111 00000 1111111111 1112255668899999999887654
No 451
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.22 E-value=1.8e-12 Score=140.54 Aligned_cols=153 Identities=30% Similarity=0.371 Sum_probs=122.5
Q ss_pred CEeEEEcCCCCccccCCcccc-------------------------CCCCCCEEEccCCCCCCccccccccCCccceeec
Q 006522 66 RVTSLYLPNRNLTGYMPSELG-------------------------LLNSLTRLSLASNNFSKPIPANLFNATNLVYLDL 120 (642)
Q Consensus 66 ~v~~l~l~~~~l~g~~p~~l~-------------------------~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 120 (642)
.+.+|+|..|+|....+..+. .++.|+.|+|.+|.|+...-+.+.+...|+.|+|
T Consensus 311 sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhL 390 (1081)
T KOG0618|consen 311 SLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHL 390 (1081)
T ss_pred eeeeeeehhccccccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeee
Confidence 477888888887643221111 1344677888888888776667888999999999
Q ss_pred cCCcccccCcccccCCCCcCeEecccccCCCcchhHhhhhccccceeecccccccccCCcccCCCCCCcEEEeecCCCCC
Q 006522 121 AHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSG 200 (642)
Q Consensus 121 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 200 (642)
++|+|.......+.++..|++|+||+|.|+ .+|..+..+..|+ +|...+|++. ..| .+..++.|+.+|+|.|+|+-
T Consensus 391 syNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~-tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~ 466 (1081)
T KOG0618|consen 391 SYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLH-TLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSE 466 (1081)
T ss_pred cccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhH-HHhhcCCcee-ech-hhhhcCcceEEecccchhhh
Confidence 999998544456788999999999999999 8999999999999 9999999998 566 88999999999999999985
Q ss_pred -CcCccccccccCCcccCCCCCC
Q 006522 201 -EIPQVGSLLNQGPTAFSGNPGL 222 (642)
Q Consensus 201 -~~p~~~~~~~~~~~~~~~n~~~ 222 (642)
.+|.....+++..++++||.++
T Consensus 467 ~~l~~~~p~p~LkyLdlSGN~~l 489 (1081)
T KOG0618|consen 467 VTLPEALPSPNLKYLDLSGNTRL 489 (1081)
T ss_pred hhhhhhCCCcccceeeccCCccc
Confidence 3443333367888999999863
No 452
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.19 E-value=3.7e-10 Score=119.85 Aligned_cols=228 Identities=16% Similarity=0.181 Sum_probs=147.3
Q ss_pred eEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEeeccCCcHHHHHhcCCCCCCCCCCHHHH
Q 006522 373 TVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEAR 452 (642)
Q Consensus 373 ~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~ 452 (642)
..|.|...+.... .......+-++-|+.++||||+++++.+......|+|+|-+. -|..++.+. .....
T Consensus 38 ~~vsVF~~~~~~~-~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~l--------~~~~v 106 (690)
T KOG1243|consen 38 GPVSVFVYKRSNG-EVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKEL--------GKEEV 106 (690)
T ss_pred CceEEEEEeCCCc-hhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHHh--------HHHHH
Confidence 6777777765544 333567788899999999999999999999999999999874 577777643 23455
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCCCcccccceeeecCCCcccccCCCccc
Q 006522 453 LKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYL 532 (642)
Q Consensus 453 ~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~ 532 (642)
...+.||+.||.|||.. .+++|++|.-+.|++++.|+-||++|-++........... ...--..|.
T Consensus 107 ~~Gl~qIl~AL~FL~~d--~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~------------~~~~~~s~~ 172 (690)
T KOG1243|consen 107 CLGLFQILAALSFLNDD--CNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAK------------SLYLIESFD 172 (690)
T ss_pred HHHHHHHHHHHHHHhcc--CCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccc------------cchhhhccc
Confidence 66789999999999976 4799999999999999999999999988765443321000 000011266
Q ss_pred CccccccCCCCCcccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHHHhccCCCccccChhhhhchhHHHHHHHHH
Q 006522 533 APEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAGPENDGKGLESLVRKAFRERRPLSEVIDPALVKEIHAKRQVLATF 612 (642)
Q Consensus 533 aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~~~~~~~~l~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ 612 (642)
.|+.+.. . +-..|.|-|||+++|++.|..+-.........+.+.....+....-..+.. ... .+
T Consensus 173 ~P~~~~~-s--~~s~D~~~Lg~li~el~ng~~~~~~~~~~~~~ipk~~~~~~~k~~~~~~~~------------r~n-~~ 236 (690)
T KOG1243|consen 173 DPEEIDP-S--EWSIDSWGLGCLIEELFNGSLLTKTDLSNTGKIPKALIELYCKKLGATELK------------RPN-KL 236 (690)
T ss_pred ChhhcCc-c--ccchhhhhHHHHHHHHhCcccCcchhhhccCccchhHHHHHHHHhcccccc------------ccc-hh
Confidence 6764221 1 135699999999999999943321111111111111111110000000000 001 34
Q ss_pred HHHHhcCCCCCCCCCCHHHHHHHHHhhhc
Q 006522 613 HIALNCTELDPEFRPRMRTVSESLDRVKL 641 (642)
Q Consensus 613 ~l~~~Cl~~dP~~RPs~~ev~~~L~~l~~ 641 (642)
+++..|....+-.|=.+-+++..|++++.
T Consensus 237 ~~~~~~~~~~gff~n~fvd~~~fLeel~l 265 (690)
T KOG1243|consen 237 RFILECRLLGGFFRNDFVDTLLFLEELRL 265 (690)
T ss_pred hHHHHHHhccccccchHHHHHHHHHhccc
Confidence 56666777777777778888888877753
No 453
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.16 E-value=9e-11 Score=126.60 Aligned_cols=143 Identities=11% Similarity=0.119 Sum_probs=95.6
Q ss_pred cccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCcc---------------------------------ccH-----
Q 006522 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDAT---------------------------------WRF----- 389 (642)
Q Consensus 348 ~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~---------------------------------~~~----- 389 (642)
..+|.|++|.||+|++.+++ +.||||+.+..... +..
T Consensus 125 ~PlasaSiaQVh~A~l~~~G-----~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ 199 (537)
T PRK04750 125 KPLASASIAQVHFARLKDNG-----REVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHD 199 (537)
T ss_pred hhhcCCCccEEEEEEECCCC-----CEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHH
Confidence 57999999999999998732 89999999754110 000
Q ss_pred -HHHHHHHHHHhccc----CCCeeeEEEEEEe-CCceEEEEeeccCCcHHHH--HhcCCCCCCCCCCHHHHHHHHHHHHH
Q 006522 390 -KDFESEVEAIARVQ----HPNIVRLKAFYYA-NDEKLLISDFIRNGSLYAA--LHAGPSDSLPPLPWEARLKIAQGTAR 461 (642)
Q Consensus 390 -~~~~~E~~~l~~l~----H~nIv~l~~~~~~-~~~~~lv~e~~~~gsL~~~--l~~~~~~~~~~l~~~~~~~i~~~ia~ 461 (642)
-+|.+|+..+.+++ +.+.+.+-..+.+ ....+|||||++|+++.+. +...+.+ ...+.......++.|+
T Consensus 200 ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d-~~~la~~~v~~~~~Qi-- 276 (537)
T PRK04750 200 ELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTD-MKLLAERGVEVFFTQV-- 276 (537)
T ss_pred hhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCC-HHHHHHHHHHHHHHHH--
Confidence 12556666666663 4444554444443 4568899999999999875 3322211 0112222233333333
Q ss_pred HHHHHHhcCCCCceecCCCCCCeeeCCCC----CeEEecccccccCCCC
Q 006522 462 GLMYIHEYSPRKYVHGNIKSTKILLDDEL----HPCISGFGLNRLLPGT 506 (642)
Q Consensus 462 gL~yLH~~~~~~iiHrDlkp~NILl~~~~----~~kl~DfGla~~~~~~ 506 (642)
+. .+++|+|+||.||+++.++ .+++.|||+...+...
T Consensus 277 -----f~---~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~~ 317 (537)
T PRK04750 277 -----FR---DGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNKE 317 (537)
T ss_pred -----Hh---CCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCHH
Confidence 33 6899999999999999888 9999999999877543
No 454
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.16 E-value=3.4e-10 Score=106.03 Aligned_cols=142 Identities=15% Similarity=0.128 Sum_probs=99.1
Q ss_pred cccCccCCceeEEEEecCCC-CCCCCeEEEEEEecCCCc-----------c----------ccHHHH----HHHHHHHhc
Q 006522 348 YVVGKSKNGIMYKVVVGRGS-GMGAPTVVAVRRLTEGDA-----------T----------WRFKDF----ESEVEAIAR 401 (642)
Q Consensus 348 ~~lg~g~~g~vy~~~~~~~~-~~~~~~~vavK~~~~~~~-----------~----------~~~~~~----~~E~~~l~~ 401 (642)
..||.|.-+.||.|...++. +......+|||..+.... . ...+.+ .+|+..|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 46889999999999865421 111236899998754210 0 001223 389999999
Q ss_pred cc--CCCeeeEEEEEEeCCceEEEEeeccCCcHHH-HHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHH-HhcCCCCceec
Q 006522 402 VQ--HPNIVRLKAFYYANDEKLLISDFIRNGSLYA-ALHAGPSDSLPPLPWEARLKIAQGTARGLMYI-HEYSPRKYVHG 477 (642)
Q Consensus 402 l~--H~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~-~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yL-H~~~~~~iiHr 477 (642)
+. .-++.+.+++ ...++||||+.++.+.. .+... .++..+...+..+++.+|.+| |. .+++|+
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~------~~~~~~~~~i~~~i~~~l~~l~H~---~glVHG 149 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDA------KLNDEEMKNAYYQVLSMMKQLYKE---CNLVHA 149 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhcc------ccCHHHHHHHHHHHHHHHHHHHHh---CCeecC
Confidence 94 3566677764 56789999997754422 22221 245556677889999999999 77 799999
Q ss_pred CCCCCCeeeCCCCCeEEecccccccC
Q 006522 478 NIKSTKILLDDELHPCISGFGLNRLL 503 (642)
Q Consensus 478 Dlkp~NILl~~~~~~kl~DfGla~~~ 503 (642)
||++.||+++ ++.+.++|||.+-..
T Consensus 150 DLs~~NIL~~-~~~v~iIDF~qav~~ 174 (197)
T cd05146 150 DLSEYNMLWH-DGKVWFIDVSQSVEP 174 (197)
T ss_pred CCCHHHEEEE-CCcEEEEECCCceeC
Confidence 9999999997 467999999977543
No 455
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.13 E-value=2.7e-12 Score=132.24 Aligned_cols=131 Identities=29% Similarity=0.421 Sum_probs=77.1
Q ss_pred CEeEEEcCCCCccccCCccccCCCCCCEEEccCCCCCCccccccccCCccceeeccCCcccccCcccccCCCCcCeEecc
Q 006522 66 RVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLS 145 (642)
Q Consensus 66 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 145 (642)
.+|.|||+.|+++ .+|..+..|+ |+.|.+++|+++ .+|..++.+..|..||.+.|++. .+|..++.+.+|+.|++.
T Consensus 122 ~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vr 197 (722)
T KOG0532|consen 122 ALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVR 197 (722)
T ss_pred HHHHhhhccchhh-cCChhhhcCc-ceeEEEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHh
Confidence 3445555555555 3444454443 555555555553 45555555555555555555555 455555555555555555
Q ss_pred cccCCCcchhHhhhhccccceeecccccccccCCcccCCCCCCcEEEeecCCCCCCcCc
Q 006522 146 SNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQ 204 (642)
Q Consensus 146 ~N~l~~~~p~~~~~l~~l~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 204 (642)
.|++. .+|+.+..|+ |. .||+|+|+++ .+|-.|.+|+.|++|.|.+|.|+.++-+
T Consensus 198 Rn~l~-~lp~El~~Lp-Li-~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLqSPPAq 252 (722)
T KOG0532|consen 198 RNHLE-DLPEELCSLP-LI-RLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQSPPAQ 252 (722)
T ss_pred hhhhh-hCCHHHhCCc-ee-eeecccCcee-ecchhhhhhhhheeeeeccCCCCCChHH
Confidence 55555 4555555444 33 5777777776 6677777777777777777777755443
No 456
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.12 E-value=3.9e-10 Score=109.91 Aligned_cols=142 Identities=17% Similarity=0.235 Sum_probs=109.2
Q ss_pred cccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccC--CCeeeEEEEEEeCC---ceEE
Q 006522 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQH--PNIVRLKAFYYAND---EKLL 422 (642)
Q Consensus 348 ~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H--~nIv~l~~~~~~~~---~~~l 422 (642)
..++.|..+.+|++...++ ..+++|............++.+|+++++.+++ .++.+++.+..... ..++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g------~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~ 77 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGG------RRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFY 77 (223)
T ss_pred eecCCCccceEEEEEecCC------cceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceE
Confidence 3578899999999988664 67899987654322123678899999999965 44677777776543 5689
Q ss_pred EEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC--------------------------------
Q 006522 423 ISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYS-------------------------------- 470 (642)
Q Consensus 423 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-------------------------------- 470 (642)
||||+++.++.+.+.. ..++..++..++.+++++|.+||+..
T Consensus 78 v~e~i~G~~l~~~~~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (223)
T cd05154 78 VMERVDGRVLRDRLLR------PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRT 151 (223)
T ss_pred EEEEeCCEecCCCCCC------CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcc
Confidence 9999999888776532 13777888889999999999998621
Q ss_pred ---------------------CCCceecCCCCCCeeeCC--CCCeEEecccccc
Q 006522 471 ---------------------PRKYVHGNIKSTKILLDD--ELHPCISGFGLNR 501 (642)
Q Consensus 471 ---------------------~~~iiHrDlkp~NILl~~--~~~~kl~DfGla~ 501 (642)
...++|+|++|.||+++. ++.+.|.||+.+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~ 205 (223)
T cd05154 152 DEPPAMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELAT 205 (223)
T ss_pred cccHHHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccc
Confidence 235799999999999998 6678999998765
No 457
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.08 E-value=5.1e-11 Score=125.20 Aligned_cols=190 Identities=21% Similarity=0.235 Sum_probs=142.3
Q ss_pred ccccCccCCceeEEEEec-CCCCCCCCeEEEEEEecCCCccccH-HHHHHHHHHHhcc-cCCCeeeEEEEEEeCCceEEE
Q 006522 347 AYVVGKSKNGIMYKVVVG-RGSGMGAPTVVAVRRLTEGDATWRF-KDFESEVEAIARV-QHPNIVRLKAFYYANDEKLLI 423 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~-~~~~~~~~~~vavK~~~~~~~~~~~-~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv 423 (642)
...||.+.|+.|+++... .+. ..+++|.+.+....... ..-..|+.+...+ .|.+++++...+...+..|+=
T Consensus 270 v~~i~~~~~~~~~~~~~r~~~~-----~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip 344 (524)
T KOG0601|consen 270 VSKISDGNFSSVFKVSKRPEGD-----CIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIP 344 (524)
T ss_pred eEEccCCccccceeeeecCCCC-----ceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccCc
Confidence 356889999999998755 333 78999988765322211 2235677777666 699999988888888888899
Q ss_pred EeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCC-CCeEEeccccccc
Q 006522 424 SDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDE-LHPCISGFGLNRL 502 (642)
Q Consensus 424 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~-~~~kl~DfGla~~ 502 (642)
-||++++++...+.-. ..++...++++..|++.++.++|+ +.++|+|+||+||++..+ +..++.|||++..
T Consensus 345 ~e~~~~~s~~l~~~~~-----~~~d~~~~~~~~~q~~~~l~~i~s---~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~ 416 (524)
T KOG0601|consen 345 LEFCEGGSSSLRSVTS-----QMLDEDPRLRLTAQILTALNVIHS---KLFVHLDVKPSNILISNDGFFSKLGDFGCWTR 416 (524)
T ss_pred hhhhcCcchhhhhHHH-----HhcCcchhhhhHHHHHhccccccc---hhhhcccccccceeeccchhhhhccccccccc
Confidence 9999999987766322 137778889999999999999998 899999999999999875 8889999998864
Q ss_pred CCCCCcccccceeeecCCCcccccCCCccc-CccccccCCCCCcccchHHHHHHHHHHHhCCC
Q 006522 503 LPGTSKVTKNETIVTSGTGSRISAISNVYL-APEARIYGSKFTQKCDVYSFGIVLLEILTGRL 564 (642)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~-aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~ 564 (642)
+.-... ......+++ ..|.+.....+..+.|++|||.-+.|.+|+..
T Consensus 417 ~~~~~~---------------~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ 464 (524)
T KOG0601|consen 417 LAFSSG---------------VFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSP 464 (524)
T ss_pred cceecc---------------cccccccccccchhhccccccccccccccccccccccccCcc
Confidence 221100 111222344 35555666778899999999999999999864
No 458
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.07 E-value=1.7e-10 Score=128.85 Aligned_cols=115 Identities=26% Similarity=0.360 Sum_probs=56.9
Q ss_pred CCCCEEEccCCCCCCccccccccCCccceeeccCCcccccCcccccCCCCcCeEecccccCCCcchhHhhhhccccceee
Q 006522 89 NSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLN 168 (642)
Q Consensus 89 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~l~ 168 (642)
.+|+.|+|++|+|++ +|.. .++|+.|++++|+|++ +|.. +.+|+.|+|++|.|+ .+|... +.|+ .|+
T Consensus 342 ~~Lq~LdLS~N~Ls~-LP~l---p~~L~~L~Ls~N~L~~-LP~l---~~~L~~LdLs~N~Lt-~LP~l~---s~L~-~Ld 408 (788)
T PRK15387 342 SGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLT-SLPVLP---SELK-ELM 408 (788)
T ss_pred cccceEecCCCccCC-CCCC---Ccccceehhhcccccc-Cccc---ccccceEEecCCccc-CCCCcc---cCCC-EEE
Confidence 367777777777764 5532 2345556666666653 4432 234555566655555 234322 2344 555
Q ss_pred cccccccccCCcccCCCCCCcEEEeecCCCCCCcCccccccccCCcccCCCC
Q 006522 169 LSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNP 220 (642)
Q Consensus 169 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~ 220 (642)
+++|+|++ +|..+ .+|+.|+|++|+|+..+..+..+.++..+.+++|+
T Consensus 409 LS~N~Lss-IP~l~---~~L~~L~Ls~NqLt~LP~sl~~L~~L~~LdLs~N~ 456 (788)
T PRK15387 409 VSGNRLTS-LPMLP---SGLLSLSVYRNQLTRLPESLIHLSSETTVNLEGNP 456 (788)
T ss_pred ccCCcCCC-CCcch---hhhhhhhhccCcccccChHHhhccCCCeEECCCCC
Confidence 55555553 34322 23445555555555322222333344444455554
No 459
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.06 E-value=1.5e-11 Score=126.87 Aligned_cols=148 Identities=30% Similarity=0.422 Sum_probs=129.2
Q ss_pred CEeEEEcCCCCccccCCccccCCCCCCEEEccCCCCCCccccccccCCccceeeccCCcccccCcccccCCCCcCeEecc
Q 006522 66 RVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLS 145 (642)
Q Consensus 66 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 145 (642)
.+..+.|.+|.+. .+|..+++|..|+.|||+.|+++ .+|..++.|+ |+.|-+++|+++ .+|+.++.+..|..||.|
T Consensus 99 ~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~sNNkl~-~lp~~ig~~~tl~~ld~s 174 (722)
T KOG0532|consen 99 SLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVSNNKLT-SLPEEIGLLPTLAHLDVS 174 (722)
T ss_pred HHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEEecCccc-cCCcccccchhHHHhhhh
Confidence 3566778888887 78999999999999999999998 6899999998 999999999998 799999999999999999
Q ss_pred cccCCCcchhHhhhhccccceeecccccccccCCcccCCCCCCcEEEeecCCCCCCcCccccccccCCcccCCCCC
Q 006522 146 SNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPG 221 (642)
Q Consensus 146 ~N~l~~~~p~~~~~l~~l~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~ 221 (642)
.|++. .+|..++.+..|+ .|++..|++. .+|+++..|+ |..||+|+|+++-.+-.+..+..+..+.+..||.
T Consensus 175 ~nei~-slpsql~~l~slr-~l~vrRn~l~-~lp~El~~Lp-Li~lDfScNkis~iPv~fr~m~~Lq~l~LenNPL 246 (722)
T KOG0532|consen 175 KNEIQ-SLPSQLGYLTSLR-DLNVRRNHLE-DLPEELCSLP-LIRLDFSCNKISYLPVDFRKMRHLQVLQLENNPL 246 (722)
T ss_pred hhhhh-hchHHhhhHHHHH-HHHHhhhhhh-hCCHHHhCCc-eeeeecccCceeecchhhhhhhhheeeeeccCCC
Confidence 99999 8999999999999 9999999998 6777777776 8999999999996544444556666777888873
No 460
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.05 E-value=2.1e-09 Score=97.10 Aligned_cols=131 Identities=18% Similarity=0.292 Sum_probs=98.1
Q ss_pred ccCccCCceeEEEEecCCCCCCCCeEEEEEE-ecCCCc------cccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceE
Q 006522 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRR-LTEGDA------TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKL 421 (642)
Q Consensus 349 ~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~-~~~~~~------~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 421 (642)
++++|+-..+|.+.... ..+++|. +.+.-. .-..++-.+|+.++.+++--.|..-.=|..+.+...
T Consensus 3 ~i~~GAEa~i~~~~~~g-------~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~ 75 (204)
T COG3642 3 LIKQGAEAIIYLTDFLG-------LPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGL 75 (204)
T ss_pred hhhCCcceeEEeeeccC-------cceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCE
Confidence 57889889999886533 2344443 333211 112245678999999997655555555677788889
Q ss_pred EEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccc
Q 006522 422 LISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNR 501 (642)
Q Consensus 422 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 501 (642)
++|||++|..|.+.+... +..++..+-.-+.-||. .+|+|+||.++||++..+. +.++|||++.
T Consensus 76 I~me~I~G~~lkd~l~~~------------~~~~~r~vG~~vg~lH~---~givHGDLTtsNiIl~~~~-i~~IDfGLg~ 139 (204)
T COG3642 76 IVMEYIEGELLKDALEEA------------RPDLLREVGRLVGKLHK---AGIVHGDLTTSNIILSGGR-IYFIDFGLGE 139 (204)
T ss_pred EEEEEeCChhHHHHHHhc------------chHHHHHHHHHHHHHHh---cCeecCCCccceEEEeCCc-EEEEECCccc
Confidence 999999999999898753 24677777788888999 8999999999999998764 9999999986
Q ss_pred c
Q 006522 502 L 502 (642)
Q Consensus 502 ~ 502 (642)
.
T Consensus 140 ~ 140 (204)
T COG3642 140 F 140 (204)
T ss_pred c
Confidence 3
No 461
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.03 E-value=3.4e-10 Score=126.52 Aligned_cols=134 Identities=25% Similarity=0.360 Sum_probs=88.0
Q ss_pred CEeEEEcCCCCccccCCccccCCCCCCEEEccCCCCCCcccc---cccc--------------CCccceeeccCCccccc
Q 006522 66 RVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPA---NLFN--------------ATNLVYLDLAHNSFCGP 128 (642)
Q Consensus 66 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~---~~~~--------------l~~L~~L~L~~N~l~~~ 128 (642)
.++.|+|++|+++. +|. .+++|+.|+|++|+|++ +|. .+.. ..+|++|+|++|+|++
T Consensus 283 ~L~~L~Ls~N~Lt~-LP~---~p~~L~~LdLS~N~L~~-Lp~lp~~L~~L~Ls~N~L~~LP~lp~~Lq~LdLS~N~Ls~- 356 (788)
T PRK15387 283 GLCKLWIFGNQLTS-LPV---LPPGLQELSVSDNQLAS-LPALPSELCKLWAYNNQLTSLPTLPSGLQELSVSDNQLAS- 356 (788)
T ss_pred hcCEEECcCCcccc-ccc---cccccceeECCCCcccc-CCCCcccccccccccCccccccccccccceEecCCCccCC-
Confidence 45566677776663 333 23567777777777765 332 1111 1368888888888884
Q ss_pred CcccccCCCCcCeEecccccCCCcchhHhhhhccccceeecccccccccCCcccCCCCCCcEEEeecCCCCCCcCccccc
Q 006522 129 IPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSL 208 (642)
Q Consensus 129 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~ 208 (642)
+|.. ..+|+.|++++|+|+ .+|... ..|. .|++++|+|++ +|.. .++|+.|++++|+|++ +|.. .
T Consensus 357 LP~l---p~~L~~L~Ls~N~L~-~LP~l~---~~L~-~LdLs~N~Lt~-LP~l---~s~L~~LdLS~N~Lss-IP~l--~ 421 (788)
T PRK15387 357 LPTL---PSELYKLWAYNNRLT-SLPALP---SGLK-ELIVSGNRLTS-LPVL---PSELKELMVSGNRLTS-LPML--P 421 (788)
T ss_pred CCCC---Ccccceehhhccccc-cCcccc---cccc-eEEecCCcccC-CCCc---ccCCCEEEccCCcCCC-CCcc--h
Confidence 5543 356778888889888 466543 4577 89999999985 5544 3578999999999996 5532 2
Q ss_pred cccCCcccCCCC
Q 006522 209 LNQGPTAFSGNP 220 (642)
Q Consensus 209 ~~~~~~~~~~n~ 220 (642)
.++..+.+.+|.
T Consensus 422 ~~L~~L~Ls~Nq 433 (788)
T PRK15387 422 SGLLSLSVYRNQ 433 (788)
T ss_pred hhhhhhhhccCc
Confidence 334455666665
No 462
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.02 E-value=9.4e-10 Score=131.85 Aligned_cols=162 Identities=23% Similarity=0.277 Sum_probs=90.9
Q ss_pred ceeeEecCCCEeEEEcCCCCccccCCccccCCCCCCEEEccCCCCCCccccccccCCccceeeccCCcccccCcccccCC
Q 006522 57 WSGIHCIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTL 136 (642)
Q Consensus 57 w~gv~c~~~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 136 (642)
|.|+.+. .+++.|+|++++..+.+| .++.+++|+.|+|++|.....+|..+.++++|+.|+|++|...+.+|..+ ++
T Consensus 627 ~~~~~~l-~~Lk~L~Ls~~~~l~~ip-~ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l 703 (1153)
T PLN03210 627 WDGVHSL-TGLRNIDLRGSKNLKEIP-DLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NL 703 (1153)
T ss_pred ccccccC-CCCCEEECCCCCCcCcCC-ccccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CC
Confidence 4444332 245666666655444454 35666666666666665545666666666666666666654444555543 44
Q ss_pred CCcCeEecccccCCCc--------------------chhHh------------------------------hhhccccce
Q 006522 137 KNLTHLDLSSNLLNGS--------------------LPEFL------------------------------LDLRALTGT 166 (642)
Q Consensus 137 ~~L~~L~Ls~N~l~~~--------------------~p~~~------------------------------~~l~~l~~~ 166 (642)
++|+.|+|++|...+. +|..+ ...++|+ .
T Consensus 704 ~sL~~L~Lsgc~~L~~~p~~~~nL~~L~L~~n~i~~lP~~~~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~-~ 782 (1153)
T PLN03210 704 KSLYRLNLSGCSRLKSFPDISTNISWLDLDETAIEEFPSNLRLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLT-R 782 (1153)
T ss_pred CCCCEEeCCCCCCccccccccCCcCeeecCCCccccccccccccccccccccccchhhccccccccchhhhhccccch-h
Confidence 4555555444432222 22211 0112455 6
Q ss_pred eecccccccccCCcccCCCCCCcEEEeecCCCCCCcCccccccccCCcccCCCCCC
Q 006522 167 LNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLNQGPTAFSGNPGL 222 (642)
Q Consensus 167 l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~~ 222 (642)
|+|++|+..+.+|..++++++|+.|+|++|..-+.+|....+.++..+.++++..+
T Consensus 783 L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~~L~sL~~L~Ls~c~~L 838 (1153)
T PLN03210 783 LFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGINLESLESLDLSGCSRL 838 (1153)
T ss_pred eeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCCCccccCEEECCCCCcc
Confidence 66677766667777777888888888877654445564444555556666665443
No 463
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.02 E-value=8.6e-10 Score=123.98 Aligned_cols=125 Identities=30% Similarity=0.442 Sum_probs=95.8
Q ss_pred EecCCCEeEEEcCCCCccccCCccccCCCCCCEEEccCCCCCCccccccccCCccceeeccCCcccccCcccccCCCCcC
Q 006522 61 HCIRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLT 140 (642)
Q Consensus 61 ~c~~~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 140 (642)
.|.....+.|+|++++++. +|..+. ++|+.|+|++|+|+ .+|..+. ++|+.|+|++|+|+ .+|..+. .+|+
T Consensus 174 ~Cl~~~~~~L~L~~~~Lts-LP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~ 244 (754)
T PRK15370 174 DCLKNNKTELRLKILGLTT-IPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQ 244 (754)
T ss_pred hhcccCceEEEeCCCCcCc-CCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--cccc
Confidence 4555678899999999884 566553 57899999999998 4776654 58999999999988 5676543 4788
Q ss_pred eEecccccCCCcchhHhhhhccccceeecccccccccCCcccCCCCCCcEEEeecCCCCCC
Q 006522 141 HLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGE 201 (642)
Q Consensus 141 ~L~Ls~N~l~~~~p~~~~~l~~l~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 201 (642)
.|+|++|++. .+|..+. +.|+ .|++++|+|+ .+|..+. ++|+.|+|++|+|++.
T Consensus 245 ~L~Ls~N~L~-~LP~~l~--s~L~-~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~L 298 (754)
T PRK15370 245 EMELSINRIT-ELPERLP--SALQ-SLDLFHNKIS-CLPENLP--EELRYLSVYDNSIRTL 298 (754)
T ss_pred EEECcCCccC-cCChhHh--CCCC-EEECcCCccC-ccccccC--CCCcEEECCCCccccC
Confidence 9999999988 6777664 4677 8889999888 4666553 4788899999988864
No 464
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.01 E-value=4.2e-11 Score=114.19 Aligned_cols=131 Identities=28% Similarity=0.382 Sum_probs=104.5
Q ss_pred ccccCCCCCCEEEccCCCCCCccccccccCCccceeeccCCcccccCcccccCCCCcCeEecccccCCCcchhHhhhhcc
Q 006522 83 SELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRA 162 (642)
Q Consensus 83 ~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 162 (642)
..+...+.|+.||||+|.++ .+.....-+|.++.|++|+|.+.. + ..+..|++|++||||+|.++ .+..+-..|-+
T Consensus 278 ~~~dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~-v-~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGN 353 (490)
T KOG1259|consen 278 VSADTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRT-V-QNLAELPQLQLLDLSGNLLA-ECVGWHLKLGN 353 (490)
T ss_pred EecchHhhhhhccccccchh-hhhhhhhhccceeEEeccccceee-e-hhhhhcccceEeecccchhH-hhhhhHhhhcC
Confidence 33445678999999999997 577788888999999999999983 3 34889999999999999998 66666677888
Q ss_pred ccceeecccccccccCCcccCCCCCCcEEEeecCCCCC--CcCccccccccCCcccCCCC
Q 006522 163 LTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSG--EIPQVGSLLNQGPTAFSGNP 220 (642)
Q Consensus 163 l~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~--~~p~~~~~~~~~~~~~~~n~ 220 (642)
.+ +|.|+.|.+.. + ..++.+-+|..||+++|+|.. .+-.+++++.+....+.+||
T Consensus 354 IK-tL~La~N~iE~-L-SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NP 410 (490)
T KOG1259|consen 354 IK-TLKLAQNKIET-L-SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNP 410 (490)
T ss_pred Ee-eeehhhhhHhh-h-hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCC
Confidence 88 99999998852 2 356777889999999999974 34455666666667778887
No 465
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.00 E-value=3.5e-11 Score=130.79 Aligned_cols=126 Identities=34% Similarity=0.440 Sum_probs=111.1
Q ss_pred CEeEEEcCCCCccccCCccccCCCCCCEEEccCCCCCCcccc-ccccCCccceeeccCCcccccCcccccCCCCcCeEec
Q 006522 66 RVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPA-NLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (642)
Q Consensus 66 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 144 (642)
.+..|+|.+|.|+...=+.|.+..+|+.|+|++|+|. .+|. .+.++..|+.|+||+|+|+ .+|..+.++..|+.|..
T Consensus 360 ~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~-~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~a 437 (1081)
T KOG0618|consen 360 ALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLN-SFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRA 437 (1081)
T ss_pred HHHHHHHhcCcccccchhhhccccceeeeeecccccc-cCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhh
Confidence 5778899999999888788999999999999999997 5665 4669999999999999999 78999999999999999
Q ss_pred ccccCCCcchhHhhhhccccceeeccccccccc-CCcccCCCCCCcEEEeecCC
Q 006522 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQ-IPEMYGHFPVMVSLDLRNNN 197 (642)
Q Consensus 145 s~N~l~~~~p~~~~~l~~l~~~l~l~~N~l~~~-~p~~~~~l~~L~~L~l~~N~ 197 (642)
.+|++. .+| .+..+++|+ .+|+|.|+++.. +|... ..++|++|||++|.
T Consensus 438 hsN~l~-~fP-e~~~l~qL~-~lDlS~N~L~~~~l~~~~-p~p~LkyLdlSGN~ 487 (1081)
T KOG0618|consen 438 HSNQLL-SFP-ELAQLPQLK-VLDLSCNNLSEVTLPEAL-PSPNLKYLDLSGNT 487 (1081)
T ss_pred cCCcee-ech-hhhhcCcce-EEecccchhhhhhhhhhC-CCcccceeeccCCc
Confidence 999999 888 788999999 999999999844 44433 33799999999997
No 466
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=98.98 E-value=6.5e-10 Score=124.93 Aligned_cols=123 Identities=28% Similarity=0.457 Sum_probs=87.7
Q ss_pred cCCCEeEEEcCCCCccccCCccccCCCCCCEEEccCCCCCCccccccccCCccceeeccCCcccccCcccccCCCCcCeE
Q 006522 63 IRNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHL 142 (642)
Q Consensus 63 ~~~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 142 (642)
.+..++.|+|++|+++. +|..+. ++|+.|+|++|+|+ .+|..+. ++|+.|+|++|++. .+|..+. ++|+.|
T Consensus 197 Ip~~L~~L~Ls~N~Lts-LP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L 267 (754)
T PRK15370 197 IPEQITTLILDNNELKS-LPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELSINRIT-ELPERLP--SALQSL 267 (754)
T ss_pred cccCCcEEEecCCCCCc-CChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECcCCccC-cCChhHh--CCCCEE
Confidence 34578899999999984 566554 58999999999997 4676553 46888888888887 5676553 478888
Q ss_pred ecccccCCCcchhHhhhhccccceeecccccccccCCcccCCCCCCcEEEeecCCCCCC
Q 006522 143 DLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGE 201 (642)
Q Consensus 143 ~Ls~N~l~~~~p~~~~~l~~l~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 201 (642)
+|++|+|+ .+|..+. .+|+ .|++++|+|++ +|..+. ++|+.|++++|+|+..
T Consensus 268 ~Ls~N~L~-~LP~~l~--~sL~-~L~Ls~N~Lt~-LP~~lp--~sL~~L~Ls~N~Lt~L 319 (754)
T PRK15370 268 DLFHNKIS-CLPENLP--EELR-YLSVYDNSIRT-LPAHLP--SGITHLNVQSNSLTAL 319 (754)
T ss_pred ECcCCccC-ccccccC--CCCc-EEECCCCcccc-Ccccch--hhHHHHHhcCCccccC
Confidence 88888887 5666543 3566 78888888874 444332 3567777777777753
No 467
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.94 E-value=2.5e-08 Score=98.96 Aligned_cols=142 Identities=13% Similarity=0.069 Sum_probs=98.8
Q ss_pred cccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccH----------HHHHHHHHHHhcccCC--CeeeEEEEEE
Q 006522 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRF----------KDFESEVEAIARVQHP--NIVRLKAFYY 415 (642)
Q Consensus 348 ~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~----------~~~~~E~~~l~~l~H~--nIv~l~~~~~ 415 (642)
+++-......|+++... | +.+.||+.......... ..+.+|...+.++... .+.+.+++..
T Consensus 28 e~v~~~~~rrvvr~~~~-g------~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e 100 (268)
T PRK15123 28 EVFRELEGRRTLRFELA-G------KSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGE 100 (268)
T ss_pred cEEecCCCceEEEEEEC-C------EEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEE
Confidence 34443333446666543 3 67999977443211111 2478999999888433 3444555654
Q ss_pred e-----CCceEEEEeeccCC-cHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCC-
Q 006522 416 A-----NDEKLLISDFIRNG-SLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDD- 488 (642)
Q Consensus 416 ~-----~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~- 488 (642)
. ....++|+|++++- +|.+++..... .+.+...+..++.+++..+.-||. .+|+|+|++++|||++.
T Consensus 101 ~~~~~~~~~s~LVte~l~~~~sL~~~~~~~~~---~~~~~~~~~~ll~~la~~i~~LH~---~Gi~HgDL~~~NiLl~~~ 174 (268)
T PRK15123 101 RGSNPATRTSFIITEDLAPTISLEDYCADWAT---NPPDPRLKRMLIKRVATMVRDMHA---AGINHRDCYICHFLLHLP 174 (268)
T ss_pred ecCCCccceeEEEEeeCCCCccHHHHHHhhcc---cCCCHHHHHHHHHHHHHHHHHHHH---CcCccCCCChhhEEEecc
Confidence 3 22478999999986 79998854321 124556778899999999999999 89999999999999975
Q ss_pred ------CCCeEEeccccccc
Q 006522 489 ------ELHPCISGFGLNRL 502 (642)
Q Consensus 489 ------~~~~kl~DfGla~~ 502 (642)
+..+.++||+.++.
T Consensus 175 ~~~~~~~~~~~LIDl~r~~~ 194 (268)
T PRK15123 175 FPGREEDLKLSVIDLHRAQI 194 (268)
T ss_pred ccCCCCCceEEEEECCcccc
Confidence 57899999997753
No 468
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=98.93 E-value=3.9e-10 Score=116.55 Aligned_cols=135 Identities=24% Similarity=0.296 Sum_probs=87.1
Q ss_pred CCEeEEEcCCCCccccCCccccCCCC---CCEEEccCCCCCC----ccccccccC-CccceeeccCCccccc----Cccc
Q 006522 65 NRVTSLYLPNRNLTGYMPSELGLLNS---LTRLSLASNNFSK----PIPANLFNA-TNLVYLDLAHNSFCGP----IPDR 132 (642)
Q Consensus 65 ~~v~~l~l~~~~l~g~~p~~l~~l~~---L~~L~Ls~N~l~~----~~p~~~~~l-~~L~~L~L~~N~l~~~----~p~~ 132 (642)
..++.|+|++|.+.+..+..+..+.. |+.|++++|++++ .+...+..+ ++|+.|+|++|.+++. ++..
T Consensus 81 ~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~ 160 (319)
T cd00116 81 CGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKA 160 (319)
T ss_pred CceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHH
Confidence 36777777777777655555555555 7777887777763 223344455 7777778877777732 3334
Q ss_pred ccCCCCcCeEecccccCCCc----chhHhhhhccccceeeccccccccc----CCcccCCCCCCcEEEeecCCCCC
Q 006522 133 IKTLKNLTHLDLSSNLLNGS----LPEFLLDLRALTGTLNLSFNQFSGQ----IPEMYGHFPVMVSLDLRNNNLSG 200 (642)
Q Consensus 133 ~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~l~~~l~l~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~ 200 (642)
+..+.+|+.|+|++|.+++. ++..+..++.|+ .|++++|.+++. ++..+..+++|+.|++++|.+++
T Consensus 161 ~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~-~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~ 235 (319)
T cd00116 161 LRANRDLKELNLANNGIGDAGIRALAEGLKANCNLE-VLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTD 235 (319)
T ss_pred HHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCC-EEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCch
Confidence 55666777777777777642 333444455677 777777777532 33445566777777777777764
No 469
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.92 E-value=5e-10 Score=123.80 Aligned_cols=208 Identities=18% Similarity=0.213 Sum_probs=135.6
Q ss_pred ccCccCCceeEEEEecCCCCCCCCeEEEEEEecCC--CccccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCceEEEEee
Q 006522 349 VVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG--DATWRFKDFESEVEAIARVQHPNIVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 349 ~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 426 (642)
-+-+|.++.++-+.-...+ ...+.|..... -...+.+...++-.++-..+||-+++..--+-.....+||++|
T Consensus 811 p~qS~sp~ss~p~~pa~sg-----h~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L~~~~ 885 (1205)
T KOG0606|consen 811 PSQSGSPSSSFPASPAGSG-----HTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPLVGHY 885 (1205)
T ss_pred cccCCCCcccccCCccccc-----cccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcchhhHH
Confidence 4556777777765544332 11222222111 1111123344454455445677777655544456678999999
Q ss_pred ccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCC
Q 006522 427 IRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506 (642)
Q Consensus 427 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 506 (642)
..+++|...++..+. .+.+........+..+++|||. ..+.|||+||.|++...++..+++|||........
T Consensus 886 ~~~~~~~Skl~~~~~-----~saepaRs~i~~~vqs~e~L~s---~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~ 957 (1205)
T KOG0606|consen 886 LNGGDLPSKLHNSGC-----LSAEPARSPILERVQSLESLHS---SLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLI 957 (1205)
T ss_pred hccCCchhhhhcCCC-----cccccccchhHHHHhhhhcccc---chhhcccccccchhhcccCCcccCccccccccccc
Confidence 999999999987652 3333444555667889999998 56999999999999999999999999954433211
Q ss_pred Cccc---------------ccceeeecC----CCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCC
Q 006522 507 SKVT---------------KNETIVTSG----TGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDA 567 (642)
Q Consensus 507 ~~~~---------------~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~ 567 (642)
.... ......... .......||+.|.+||... +......+|.|+.|++++|.++|..||.
T Consensus 958 ~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~l-g~~hgs~ad~~~~g~~l~e~l~g~pp~n 1036 (1205)
T KOG0606|consen 958 PPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILL-GRRHGSAADWWSSGVCLFEVLTGIPPFN 1036 (1205)
T ss_pred cCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccc-cccCCCcchhhhhhhhhhhhhcCCCCCC
Confidence 0000 000000000 1123567899999999855 4778889999999999999999999997
Q ss_pred CCC
Q 006522 568 GPE 570 (642)
Q Consensus 568 ~~~ 570 (642)
...
T Consensus 1037 a~t 1039 (1205)
T KOG0606|consen 1037 AET 1039 (1205)
T ss_pred Ccc
Confidence 543
No 470
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=98.92 E-value=1.9e-10 Score=109.84 Aligned_cols=131 Identities=28% Similarity=0.350 Sum_probs=109.2
Q ss_pred CEeEEEcCCCCccccCCccccCCCCCCEEEccCCCCCCccccccccCCccceeeccCCcccccCcccccCCCCcCeEecc
Q 006522 66 RVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLS 145 (642)
Q Consensus 66 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 145 (642)
-++.|||++|.++ .+..+..-++.++.|++|+|.+.. +- .+..|++|+.||||+|.++ .+..+-.+|-+.+.|.|+
T Consensus 285 ~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~-v~-nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~La 360 (490)
T KOG1259|consen 285 ELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRT-VQ-NLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLKLA 360 (490)
T ss_pred hhhhccccccchh-hhhhhhhhccceeEEeccccceee-eh-hhhhcccceEeecccchhH-hhhhhHhhhcCEeeeehh
Confidence 3688999999998 567888899999999999999973 33 4889999999999999998 455666788999999999
Q ss_pred cccCCCcchhHhhhhccccceeeccccccccc-CCcccCCCCCCcEEEeecCCCCCCcC
Q 006522 146 SNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQ-IPEMYGHFPVMVSLDLRNNNLSGEIP 203 (642)
Q Consensus 146 ~N~l~~~~p~~~~~l~~l~~~l~l~~N~l~~~-~p~~~~~l~~L~~L~l~~N~l~~~~p 203 (642)
.|.+.. -+.+..|=+|. .|++++|+|... --..+++++.|++|.|.+|.|++.+.
T Consensus 361 ~N~iE~--LSGL~KLYSLv-nLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~vd 416 (490)
T KOG1259|consen 361 QNKIET--LSGLRKLYSLV-NLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSVD 416 (490)
T ss_pred hhhHhh--hhhhHhhhhhe-eccccccchhhHHHhcccccccHHHHHhhcCCCccccch
Confidence 999862 24566777788 899999999732 13468999999999999999998654
No 471
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.90 E-value=1e-09 Score=82.76 Aligned_cols=61 Identities=38% Similarity=0.501 Sum_probs=46.4
Q ss_pred CCCCEEEccCCCCCCccccccccCCccceeeccCCcccccCcccccCCCCcCeEecccccC
Q 006522 89 NSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLL 149 (642)
Q Consensus 89 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 149 (642)
++|+.|+|++|+|+...+..|.++++|++|+|++|+++...|..|.++++|++|+|++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 4677888888888755445667788888888888888777677778888888888888765
No 472
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=98.90 E-value=4.1e-10 Score=116.37 Aligned_cols=154 Identities=25% Similarity=0.225 Sum_probs=105.3
Q ss_pred CEeEEEcCCCCccc------cCCccccCCCCCCEEEccCCCCCCccccccccCCc---cceeeccCCcccc----cCccc
Q 006522 66 RVTSLYLPNRNLTG------YMPSELGLLNSLTRLSLASNNFSKPIPANLFNATN---LVYLDLAHNSFCG----PIPDR 132 (642)
Q Consensus 66 ~v~~l~l~~~~l~g------~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~---L~~L~L~~N~l~~----~~p~~ 132 (642)
.++.|+++++.+.+ .++..+..+++|+.|+|++|.+.+..+..+..+.+ |++|++++|++++ .+...
T Consensus 52 ~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~ 131 (319)
T cd00116 52 SLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKG 131 (319)
T ss_pred CceEEeccccccCCcchHHHHHHHHHHhcCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHH
Confidence 47788888877762 24456777888899999988887766666666655 8999998888873 33344
Q ss_pred ccCC-CCcCeEecccccCCCc----chhHhhhhccccceeecccccccc----cCCcccCCCCCCcEEEeecCCCCCCcC
Q 006522 133 IKTL-KNLTHLDLSSNLLNGS----LPEFLLDLRALTGTLNLSFNQFSG----QIPEMYGHFPVMVSLDLRNNNLSGEIP 203 (642)
Q Consensus 133 ~~~l-~~L~~L~Ls~N~l~~~----~p~~~~~l~~l~~~l~l~~N~l~~----~~p~~~~~l~~L~~L~l~~N~l~~~~p 203 (642)
+..+ ++|+.|+|++|.+++. ++..+..+..|+ .|++++|.+++ .++..+..+++|+.|+|++|.+++...
T Consensus 132 l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~-~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~ 210 (319)
T cd00116 132 LKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLK-ELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGA 210 (319)
T ss_pred HHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcC-EEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHH
Confidence 5566 8889999999988843 334455566788 88888888874 234445566788889999888874322
Q ss_pred c-----cccccccCCcccCCCC
Q 006522 204 Q-----VGSLLNQGPTAFSGNP 220 (642)
Q Consensus 204 ~-----~~~~~~~~~~~~~~n~ 220 (642)
. +..+.++..+.+++|+
T Consensus 211 ~~l~~~~~~~~~L~~L~ls~n~ 232 (319)
T cd00116 211 SALAETLASLKSLEVLNLGDNN 232 (319)
T ss_pred HHHHHHhcccCCCCEEecCCCc
Confidence 1 1223344555555553
No 473
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=98.90 E-value=1.4e-09 Score=99.84 Aligned_cols=109 Identities=32% Similarity=0.354 Sum_probs=35.2
Q ss_pred cCCCCCCEEEccCCCCCCccccccc-cCCccceeeccCCcccccCcccccCCCCcCeEecccccCCCcchhHh-hhhccc
Q 006522 86 GLLNSLTRLSLASNNFSKPIPANLF-NATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFL-LDLRAL 163 (642)
Q Consensus 86 ~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~l 163 (642)
.+...++.|+|++|.|+. | +.+. .+.+|+.|+|++|.++. ++ .+..+++|+.|+|++|+++ .+++.+ ..+++|
T Consensus 16 ~n~~~~~~L~L~~n~I~~-I-e~L~~~l~~L~~L~Ls~N~I~~-l~-~l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp~L 90 (175)
T PF14580_consen 16 NNPVKLRELNLRGNQIST-I-ENLGATLDKLEVLDLSNNQITK-LE-GLPGLPRLKTLDLSNNRIS-SISEGLDKNLPNL 90 (175)
T ss_dssp ----------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS----S-CHHHHHH-TT-
T ss_pred cccccccccccccccccc-c-cchhhhhcCCCEEECCCCCCcc-cc-CccChhhhhhcccCCCCCC-ccccchHHhCCcC
Confidence 344567777777777763 3 2454 46777777777777774 32 4666777788888888877 343333 356777
Q ss_pred cceeecccccccccC-CcccCCCCCCcEEEeecCCCCC
Q 006522 164 TGTLNLSFNQFSGQI-PEMYGHFPVMVSLDLRNNNLSG 200 (642)
Q Consensus 164 ~~~l~l~~N~l~~~~-p~~~~~l~~L~~L~l~~N~l~~ 200 (642)
+ .|++++|+|...- -..++.+++|+.|+|.+|.++.
T Consensus 91 ~-~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~ 127 (175)
T PF14580_consen 91 Q-ELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCE 127 (175)
T ss_dssp --EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGG
T ss_pred C-EEECcCCcCCChHHhHHHHcCCCcceeeccCCcccc
Confidence 7 7778888776321 1345667788888888887763
No 474
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=98.89 E-value=8.4e-10 Score=101.37 Aligned_cols=120 Identities=29% Similarity=0.397 Sum_probs=51.0
Q ss_pred CEeEEEcCCCCccccCCcccc-CCCCCCEEEccCCCCCCccccccccCCccceeeccCCcccccCcccc-cCCCCcCeEe
Q 006522 66 RVTSLYLPNRNLTGYMPSELG-LLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRI-KTLKNLTHLD 143 (642)
Q Consensus 66 ~v~~l~l~~~~l~g~~p~~l~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~ 143 (642)
+++.|+|++|.++- + +.++ .+.+|+.|+||+|.++. ++ .+..++.|+.|+|++|+++. +++.+ ..+++|++|+
T Consensus 20 ~~~~L~L~~n~I~~-I-e~L~~~l~~L~~L~Ls~N~I~~-l~-~l~~L~~L~~L~L~~N~I~~-i~~~l~~~lp~L~~L~ 94 (175)
T PF14580_consen 20 KLRELNLRGNQIST-I-ENLGATLDKLEVLDLSNNQITK-LE-GLPGLPRLKTLDLSNNRISS-ISEGLDKNLPNLQELY 94 (175)
T ss_dssp ------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS---S--CHHHHHH-TT--EEE
T ss_pred cccccccccccccc-c-cchhhhhcCCCEEECCCCCCcc-cc-CccChhhhhhcccCCCCCCc-cccchHHhCCcCCEEE
Confidence 56889999999984 3 4566 58999999999999985 44 58889999999999999995 54444 4699999999
Q ss_pred cccccCCCcc-hhHhhhhccccceeecccccccccCCc----ccCCCCCCcEEE
Q 006522 144 LSSNLLNGSL-PEFLLDLRALTGTLNLSFNQFSGQIPE----MYGHFPVMVSLD 192 (642)
Q Consensus 144 Ls~N~l~~~~-p~~~~~l~~l~~~l~l~~N~l~~~~p~----~~~~l~~L~~L~ 192 (642)
|++|++...- -..+..++.|+ .|+|.+|+++.. +. .+..+|+|+.||
T Consensus 95 L~~N~I~~l~~l~~L~~l~~L~-~L~L~~NPv~~~-~~YR~~vi~~lP~Lk~LD 146 (175)
T PF14580_consen 95 LSNNKISDLNELEPLSSLPKLR-VLSLEGNPVCEK-KNYRLFVIYKLPSLKVLD 146 (175)
T ss_dssp -TTS---SCCCCGGGGG-TT---EEE-TT-GGGGS-TTHHHHHHHH-TT-SEET
T ss_pred CcCCcCCChHHhHHHHcCCCcc-eeeccCCcccch-hhHHHHHHHHcChhheeC
Confidence 9999997421 14567889999 999999999843 32 345677888776
No 475
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.86 E-value=2.4e-08 Score=89.80 Aligned_cols=142 Identities=13% Similarity=0.219 Sum_probs=100.5
Q ss_pred ccccCccCCceeEEEEecCCCCCCCCeEEEEEE-ecCCCc------cccHHHHHHHHHHHhcccCCCeeeEEEEEEeCCc
Q 006522 347 AYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRR-LTEGDA------TWRFKDFESEVEAIARVQHPNIVRLKAFYYANDE 419 (642)
Q Consensus 347 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~-~~~~~~------~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~ 419 (642)
-.++-+|+-+.|+++.... +...||. ..+... .-..++-.+|+.++.+++--.|.--.=++.+...
T Consensus 12 l~likQGAEArv~~~~~~G-------e~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~ 84 (229)
T KOG3087|consen 12 LELIKQGAEARVPRGSFSG-------EAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYG 84 (229)
T ss_pred ceeeeccceeeEeeeccCC-------ceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCC
Confidence 3567889988999887665 3444443 333211 1122567789999999975555544456667777
Q ss_pred eEEEEeeccC-CcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCC---CeEEe
Q 006522 420 KLLISDFIRN-GSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDEL---HPCIS 495 (642)
Q Consensus 420 ~~lv~e~~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~---~~kl~ 495 (642)
-.++|||+++ -++.+++....... -.......+++.|-+.+.-||. ..|+|+||..+||++..++ .+.+.
T Consensus 85 ~~i~ME~~~g~~~vk~~i~~~~~~~---~~d~~~~~~~~~iG~~igklH~---ndiiHGDLTTSNill~~~~~~~~~~lI 158 (229)
T KOG3087|consen 85 GQIYMEFIDGASTVKDFILSTMEDE---SEDEGLAELARRIGELIGKLHD---NDIIHGDLTTSNILLRSDGNQITPILI 158 (229)
T ss_pred CeEEEEeccchhHHHHHHHHHccCc---ccchhHHHHHHHHHHHHHHhhh---CCeecccccccceEEecCCCcCceEEE
Confidence 7899999976 47888887654321 2222336788999999999999 8999999999999996543 45799
Q ss_pred cccccc
Q 006522 496 GFGLNR 501 (642)
Q Consensus 496 DfGla~ 501 (642)
|||++.
T Consensus 159 dfgls~ 164 (229)
T KOG3087|consen 159 DFGLSS 164 (229)
T ss_pred eecchh
Confidence 999975
No 476
>PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A.
Probab=98.86 E-value=2.4e-09 Score=74.02 Aligned_cols=41 Identities=51% Similarity=0.991 Sum_probs=31.3
Q ss_pred hHhHHHHHHHHHhcccCCCCCCCCCCCCC-CCCCCceeeEec
Q 006522 23 NQDGLALLALKAAIAQDPTRALDSWSESD-STPCHWSGIHCI 63 (642)
Q Consensus 23 ~~~~~~l~~~~~~~~~~~~~~~~~w~~~~-~~~c~w~gv~c~ 63 (642)
++|++||++||+++..+|.+.+.+|+... .+||+|.||+|+
T Consensus 2 ~~d~~aLl~~k~~l~~~~~~~l~~W~~~~~~~~C~W~GV~Cd 43 (43)
T PF08263_consen 2 NQDRQALLAFKKSLNNDPSGVLSSWNPSSDSDPCSWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHHHHCTT-SC-CCCTT--TT--S-CCCSTTEEE-
T ss_pred cHHHHHHHHHHHhcccccCcccccCCCcCCCCCeeeccEEeC
Confidence 57999999999999877778899999874 789999999995
No 477
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=98.85 E-value=1.2e-08 Score=122.47 Aligned_cols=134 Identities=22% Similarity=0.257 Sum_probs=91.0
Q ss_pred CCCEeEEEcCCCCccccCCccccCCCCCCEEEccCCCCCCccccccccCCccceeeccCCcccccCcccccCCCCcCeEe
Q 006522 64 RNRVTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLD 143 (642)
Q Consensus 64 ~~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 143 (642)
+..++.|++.++.+. .+|..+ .+.+|+.|+|++|++. .+|..+..+++|++|+|++|...+.+|. +..+++|+.|+
T Consensus 588 p~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~ 663 (1153)
T PLN03210 588 PPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLK 663 (1153)
T ss_pred CcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEE
Confidence 345666777666654 455555 4577777777777775 4666677777777777777665556664 66777777777
Q ss_pred cccccCCCcchhHhhhhccccceeecccccccccCCcccCCCCCCcEEEeecCCCCCCcC
Q 006522 144 LSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIP 203 (642)
Q Consensus 144 Ls~N~l~~~~p~~~~~l~~l~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 203 (642)
|++|.....+|..+..+++|+ .|++++|...+.+|..+ ++++|+.|+|++|...+.+|
T Consensus 664 L~~c~~L~~lp~si~~L~~L~-~L~L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p 721 (1153)
T PLN03210 664 LSDCSSLVELPSSIQYLNKLE-DLDMSRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFP 721 (1153)
T ss_pred ecCCCCccccchhhhccCCCC-EEeCCCCCCcCccCCcC-CCCCCCEEeCCCCCCccccc
Confidence 777766567777777777777 77777765445666554 56777777777766555555
No 478
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.83 E-value=3.7e-08 Score=101.55 Aligned_cols=172 Identities=22% Similarity=0.290 Sum_probs=127.6
Q ss_pred CCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCCeeeEEEEEEe----CCceEEEEeeccC
Q 006522 354 KNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPNIVRLKAFYYA----NDEKLLISDFIRN 429 (642)
Q Consensus 354 ~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~----~~~~~lv~e~~~~ 429 (642)
-..+.||++...++ ..+++|+++..... .......-+++.+++.|+|||++.+.|.. +...++||+|.++
T Consensus 288 ~~~Ttyk~~s~~DG-----~~YvLkRlhg~r~~-~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~ 361 (655)
T KOG3741|consen 288 FSITTYKATSNVDG-----NAYVLKRLHGDRDQ-STNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPS 361 (655)
T ss_pred ccceeEeeeeccCC-----ceeeeeeecccccc-CcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCC
Confidence 34578999887765 88999999432111 11122345778999999999999998873 3468899999985
Q ss_pred -CcHHHHHhcCCCCC----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEeccc
Q 006522 430 -GSLYAALHAGPSDS----------LPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFG 498 (642)
Q Consensus 430 -gsL~~~l~~~~~~~----------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfG 498 (642)
++|+++-....... ....+++..+.++.|+..||.++|+ .|+.-+-|.+.+||++.+.+++|+..|
T Consensus 362 s~TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHs---sGLAck~L~~~kIlv~G~~RIriS~C~ 438 (655)
T KOG3741|consen 362 SPTLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHS---SGLACKTLDLKKILVTGKMRIRISGCG 438 (655)
T ss_pred CchHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHh---cCceeecccHhHeEeeCcceEEEeccc
Confidence 57877764432211 2347889999999999999999999 789889999999999999999999998
Q ss_pred ccccCCCCCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCC
Q 006522 499 LNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRL 564 (642)
Q Consensus 499 la~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~ 564 (642)
+...+..+. . |. +. --.+-|.=.||.+++.|.||..
T Consensus 439 i~Dvl~~d~------------------------~--~~-le---~~Qq~D~~~lG~ll~aLAt~~~ 474 (655)
T KOG3741|consen 439 IMDVLQEDP------------------------T--EP-LE---SQQQNDLRDLGLLLLALATGTE 474 (655)
T ss_pred ceeeecCCC------------------------C--cc-hh---HHhhhhHHHHHHHHHHHhhccc
Confidence 765544331 0 11 11 1235688899999999999954
No 479
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=98.80 E-value=2.3e-09 Score=114.30 Aligned_cols=128 Identities=37% Similarity=0.540 Sum_probs=88.6
Q ss_pred CEeEEEcCCCCccccCCccccCCC-CCCEEEccCCCCCCccccccccCCccceeeccCCcccccCcccccCCCCcCeEec
Q 006522 66 RVTSLYLPNRNLTGYMPSELGLLN-SLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDL 144 (642)
Q Consensus 66 ~v~~l~l~~~~l~g~~p~~l~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 144 (642)
.++.|++.+|+++ .+|+..+.+. +|+.|++++|.+. .+|..+..+++|+.|++++|+++ .+|.....+++|+.|++
T Consensus 117 ~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L~l 193 (394)
T COG4886 117 NLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDL 193 (394)
T ss_pred ceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhhhhhhhhhhheec
Confidence 5788889888888 5677777774 8999999999986 56667888899999999999988 56666667888888888
Q ss_pred ccccCCCcchhHhhhhccccceeecccccccccCCcccCCCCCCcEEEeecCCCC
Q 006522 145 SSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLS 199 (642)
Q Consensus 145 s~N~l~~~~p~~~~~l~~l~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 199 (642)
++|+++ .+|.....+..|. .+.+++|++. ..+..+.++.++..|.+++|++.
T Consensus 194 s~N~i~-~l~~~~~~~~~L~-~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~ 245 (394)
T COG4886 194 SGNKIS-DLPPEIELLSALE-ELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE 245 (394)
T ss_pred cCCccc-cCchhhhhhhhhh-hhhhcCCcce-ecchhhhhcccccccccCCceee
Confidence 888888 6666544444455 5666666322 23333344444444444444443
No 480
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.77 E-value=4.6e-08 Score=91.43 Aligned_cols=126 Identities=18% Similarity=0.271 Sum_probs=82.0
Q ss_pred eeEEEEecCCCCCCCCeEEEEEEecCCCccc-------------------------cHHHHHHHHHHHhcccCC--Ceee
Q 006522 357 IMYKVVVGRGSGMGAPTVVAVRRLTEGDATW-------------------------RFKDFESEVEAIARVQHP--NIVR 409 (642)
Q Consensus 357 ~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~-------------------------~~~~~~~E~~~l~~l~H~--nIv~ 409 (642)
.||.|...++ ..+|||..+...... ......+|.+.|.++..- ++.+
T Consensus 1 ~Vy~~~~~~~------~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~ 74 (188)
T PF01163_consen 1 DVYHAIDPDG------EEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPK 74 (188)
T ss_dssp EEEEEEECTT------EEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--
T ss_pred CEEEEECCCC------CEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCc
Confidence 3888888777 799999876531100 113467899999999755 5666
Q ss_pred EEEEEEeCCceEEEEeecc--CCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHH-HhcCCCCceecCCCCCCeee
Q 006522 410 LKAFYYANDEKLLISDFIR--NGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYI-HEYSPRKYVHGNIKSTKILL 486 (642)
Q Consensus 410 l~~~~~~~~~~~lv~e~~~--~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yL-H~~~~~~iiHrDlkp~NILl 486 (642)
.+++. ...+||||++ |..+..+.... ++......++.+++..+..+ |. .+|+|+||.+.||++
T Consensus 75 p~~~~----~~~ivME~I~~~G~~~~~l~~~~-------~~~~~~~~~~~~il~~~~~~~~~---~givHGDLs~~NIlv 140 (188)
T PF01163_consen 75 PYDYN----RNVIVMEYIGEDGVPLPRLKDVD-------LSPEEPKELLEEILEEIIKMLHK---AGIVHGDLSEYNILV 140 (188)
T ss_dssp EEEEE----TTEEEEE--EETTEEGGCHHHCG-------GGGSTHHHHHHHHHHHHHHHHHC---TTEEESS-STTSEEE
T ss_pred EEEEe----CCEEEEEecCCCccchhhHHhcc-------ccchhHHHHHHHHHHHHHHHHHh---cCceecCCChhhEEe
Confidence 66542 4579999998 54554433221 11234567788888866665 67 799999999999999
Q ss_pred CCCCCeEEecccccccC
Q 006522 487 DDELHPCISGFGLNRLL 503 (642)
Q Consensus 487 ~~~~~~kl~DfGla~~~ 503 (642)
+++ .+.++|||.+...
T Consensus 141 ~~~-~~~iIDf~qav~~ 156 (188)
T PF01163_consen 141 DDG-KVYIIDFGQAVDS 156 (188)
T ss_dssp ETT-CEEE--GTTEEET
T ss_pred ecc-eEEEEecCcceec
Confidence 987 9999999987543
No 481
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.76 E-value=4.7e-09 Score=79.16 Aligned_cols=59 Identities=41% Similarity=0.503 Sum_probs=30.7
Q ss_pred ccceeeccCCcccccCcccccCCCCcCeEecccccCCCcchhHhhhhccccceeeccccc
Q 006522 114 NLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQ 173 (642)
Q Consensus 114 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~l~l~~N~ 173 (642)
+|++|+|++|+++...+..|.++++|++|+|++|.++...|..|..+++|+ .|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~-~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLR-YLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTES-EEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCC-EEeCcCCc
Confidence 455556665555544444555555555555555555544444444444444 44444443
No 482
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=98.73 E-value=2.5e-09 Score=106.18 Aligned_cols=137 Identities=23% Similarity=0.252 Sum_probs=113.0
Q ss_pred CCCEEEccCCCCCCccccccccCCccceeeccCCcccccCcccccCCCCcCeEeccc-ccCCCcchhHhhhhccccceee
Q 006522 90 SLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSS-NLLNGSLPEFLLDLRALTGTLN 168 (642)
Q Consensus 90 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~l~~~l~ 168 (642)
.-+.|+|..|+|+-..|..|..+++|+.||||+|+|+-+-|++|.+|.+|..|-+-+ |+|+...-..|..|..++ .|.
T Consensus 68 ~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slq-rLl 146 (498)
T KOG4237|consen 68 ETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQ-RLL 146 (498)
T ss_pred cceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHH-HHh
Confidence 567899999999977777889999999999999999999999999999987776665 999955556788999999 899
Q ss_pred cccccccccCCcccCCCCCCcEEEeecCCCCCCcC-ccccccccCCcccCCCCCCCCCCC
Q 006522 169 LSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIP-QVGSLLNQGPTAFSGNPGLCGFPL 227 (642)
Q Consensus 169 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p-~~~~~~~~~~~~~~~n~~~~~~~~ 227 (642)
+.-|++.-...+.|..+++|..|.+..|.+.-..- .+..+..++..-...||+.|...+
T Consensus 147 lNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL 206 (498)
T KOG4237|consen 147 LNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNL 206 (498)
T ss_pred cChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCcccccccc
Confidence 99999998888999999999999999999874332 223444556666778888876543
No 483
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=98.69 E-value=1.2e-08 Score=108.67 Aligned_cols=161 Identities=32% Similarity=0.344 Sum_probs=114.5
Q ss_pred CCceeeEecCCCEe---EEEcCCCCccccCCccccCCCCCCEEEccCCCCCCccccccccCC-ccceeeccCCcccccCc
Q 006522 55 CHWSGIHCIRNRVT---SLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNAT-NLVYLDLAHNSFCGPIP 130 (642)
Q Consensus 55 c~w~gv~c~~~~v~---~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p 130 (642)
+.+.+..+...... .++++.+.+... ...+..++.++.|++.+|.++ .+|+....+. +|+.|++++|++. .+|
T Consensus 80 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~ 156 (394)
T COG4886 80 ISSLDGSENLLNLLPLPSLDLNLNRLRSN-ISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLP 156 (394)
T ss_pred cccccccccccCCCCCceeeccccccccC-chhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhh
Confidence 34444444433344 477777777533 344566688899999999997 4776777774 8999999999998 566
Q ss_pred ccccCCCCcCeEecccccCCCcchhHhhhhccccceeecccccccccCCcccCCCCCCcEEEeecCCCCCCcCccccccc
Q 006522 131 DRIKTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIPQVGSLLN 210 (642)
Q Consensus 131 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~ 210 (642)
..+..+++|+.|++++|+++ .+|...+.++.|. .|++++|+++ .+|........|++|.+++|.+...+.....+.+
T Consensus 157 ~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~-~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~~~~~~~~~~~~ 233 (394)
T COG4886 157 SPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLN-NLDLSGNKIS-DLPPEIELLSALEELDLSNNSIIELLSSLSNLKN 233 (394)
T ss_pred hhhhccccccccccCCchhh-hhhhhhhhhhhhh-heeccCCccc-cCchhhhhhhhhhhhhhcCCcceecchhhhhccc
Confidence 77888999999999999998 6777666778888 8999999998 6666655666788999999964444444444445
Q ss_pred cCCcccCCCCC
Q 006522 211 QGPTAFSGNPG 221 (642)
Q Consensus 211 ~~~~~~~~n~~ 221 (642)
+......+|..
T Consensus 234 l~~l~l~~n~~ 244 (394)
T COG4886 234 LSGLELSNNKL 244 (394)
T ss_pred ccccccCCcee
Confidence 44444555543
No 484
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.68 E-value=6.2e-07 Score=90.41 Aligned_cols=197 Identities=16% Similarity=0.233 Sum_probs=126.6
Q ss_pred cccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcc-cCCCeeeEEEEEE------eCC
Q 006522 346 SAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARV-QHPNIVRLKAFYY------AND 418 (642)
Q Consensus 346 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~------~~~ 418 (642)
.+.-+|+|+.+.+|..-...+ .+-|+......... .+-++.|... .||-+-.=+.|=+ ...
T Consensus 15 ~gr~LgqGgea~ly~l~e~~d--------~VAKIYh~Pppa~~----aqk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~ 82 (637)
T COG4248 15 PGRPLGQGGEADLYTLGEVRD--------QVAKIYHAPPPAAQ----AQKVAELAATPDAPLLNYRVAWPQATLHGGRRG 82 (637)
T ss_pred CCccccCCccceeeecchhhc--------hhheeecCCCchHH----HHHHHHhccCCCCcchhhhhcccHHHhhCCCcc
Confidence 356789999999997654433 33455554422211 1233344444 6775443122211 112
Q ss_pred c-eEEEEeeccCCc-HHHHHhc-CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEe
Q 006522 419 E-KLLISDFIRNGS-LYAALHA-GPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCIS 495 (642)
Q Consensus 419 ~-~~lv~e~~~~gs-L~~~l~~-~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~ 495 (642)
. .-+.|..+++-. ..+++.. .++...+...|...++.++.+|.+.+-||. .+.+-+|+.++|+|+.+++.+.+.
T Consensus 83 ~~iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~---~Gh~vGDVn~~~~lVsd~~~V~LV 159 (637)
T COG4248 83 KVIGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHE---HGHVVGDVNQNSFLVSDDSKVVLV 159 (637)
T ss_pred ceeEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHh---cCCcccccCccceeeecCceEEEE
Confidence 2 456777665532 2233321 223345678999999999999999999999 788999999999999999999998
Q ss_pred cccccccCCCCCcccccceeeecCCCcccccCCCcccCccccc----cCCCCCcccchHHHHHHHHHHHhC-CCCCCCCC
Q 006522 496 GFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPEARI----YGSKFTQKCDVYSFGIVLLEILTG-RLPDAGPE 570 (642)
Q Consensus 496 DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~~sDV~S~Gvvl~el~tG-~~P~~~~~ 570 (642)
|=-.-... . .++.....+|...|.+||.-. .+-.-+...|-|-+||++++++.| +.||.+..
T Consensus 160 dsDsfqi~-~------------ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~ 226 (637)
T COG4248 160 DSDSFQIN-A------------NGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIP 226 (637)
T ss_pred cccceeec-c------------CCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCccc
Confidence 73211110 0 111122346788899999622 123457789999999999999986 99998753
No 485
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.61 E-value=8.6e-07 Score=85.09 Aligned_cols=105 Identities=17% Similarity=0.211 Sum_probs=83.7
Q ss_pred HHHHHHHHHHhccc--CCCeeeEEEEEEeCC----ceEEEEeeccCC-cHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHH
Q 006522 390 KDFESEVEAIARVQ--HPNIVRLKAFYYAND----EKLLISDFIRNG-SLYAALHAGPSDSLPPLPWEARLKIAQGTARG 462 (642)
Q Consensus 390 ~~~~~E~~~l~~l~--H~nIv~l~~~~~~~~----~~~lv~e~~~~g-sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~g 462 (642)
..+.+|...+.++. .=.+.+.+++..... ..++|+|++++- +|.+++..... .+...+..++.+++..
T Consensus 56 ~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~-----~~~~~~~~ll~~l~~~ 130 (206)
T PF06293_consen 56 SRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ-----LDPSQRRELLRALARL 130 (206)
T ss_pred hHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc-----cchhhHHHHHHHHHHH
Confidence 56788998888884 334556677766533 358999999984 79999876332 4446678899999999
Q ss_pred HHHHHhcCCCCceecCCCCCCeeeCCCC---CeEEeccccccc
Q 006522 463 LMYIHEYSPRKYVHGNIKSTKILLDDEL---HPCISGFGLNRL 502 (642)
Q Consensus 463 L~yLH~~~~~~iiHrDlkp~NILl~~~~---~~kl~DfGla~~ 502 (642)
++-||. .+|+|+|+++.|||++.+. .+.++||+-++.
T Consensus 131 i~~lH~---~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 131 IAKLHD---AGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred HHHHHH---CcCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 999999 8999999999999998877 899999987664
No 486
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.58 E-value=3.2e-07 Score=88.09 Aligned_cols=134 Identities=19% Similarity=0.250 Sum_probs=93.0
Q ss_pred hhcccccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccc---------------------cHHHHHHHHHHHhcc
Q 006522 344 RASAYVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATW---------------------RFKDFESEVEAIARV 402 (642)
Q Consensus 344 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~---------------------~~~~~~~E~~~l~~l 402 (642)
.+.++.||-|.-+.||.|...++ ..+|||.=+....+. ......+|.++|.++
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g------~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L 166 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKG------RKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRL 166 (304)
T ss_pred HhhccccccCccceEEEEECCCC------CEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHh
Confidence 34579999999999999999987 788888644321100 123467899999999
Q ss_pred cCC--CeeeEEEEEEeCCceEEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCC
Q 006522 403 QHP--NIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIK 480 (642)
Q Consensus 403 ~H~--nIv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlk 480 (642)
.-. .|.+.+++ +...+||||++|-.|+..-- +....-.|+..|+.-+.-.-. .+|||+|+.
T Consensus 167 ~~~G~~VP~P~~~----nRHaVvMe~ieG~eL~~~r~----------~~en~~~il~~il~~~~~~~~---~GiVHGDlS 229 (304)
T COG0478 167 YPEGVKVPKPIAW----NRHAVVMEYIEGVELYRLRL----------DVENPDEILDKILEEVRKAYR---RGIVHGDLS 229 (304)
T ss_pred hhcCCCCCCcccc----ccceeeeehcccceeecccC----------cccCHHHHHHHHHHHHHHHHH---cCccccCCc
Confidence 644 67766655 45689999999866654321 112222333333333333324 699999999
Q ss_pred CCCeeeCCCCCeEEeccccc
Q 006522 481 STKILLDDELHPCISGFGLN 500 (642)
Q Consensus 481 p~NILl~~~~~~kl~DfGla 500 (642)
+=||+++++|.+.++||--+
T Consensus 230 efNIlV~~dg~~~vIDwPQ~ 249 (304)
T COG0478 230 EFNILVTEDGDIVVIDWPQA 249 (304)
T ss_pred hheEEEecCCCEEEEeCccc
Confidence 99999999999999999543
No 487
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.53 E-value=3.1e-08 Score=105.95 Aligned_cols=106 Identities=25% Similarity=0.343 Sum_probs=75.3
Q ss_pred HHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCCCcccccceeeecCCCcccccCCCcccCcc
Q 006522 456 AQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGTSKVTKNETIVTSGTGSRISAISNVYLAPE 535 (642)
Q Consensus 456 ~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE 535 (642)
+.+++.|+.|+|.. .++||++|.|++|.++..+..||+.|+.+........+..... .........-..-|.|||
T Consensus 105 l~~v~dgl~flh~s--Ak~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~y---d~~lp~~~~~~~~f~apE 179 (700)
T KOG2137|consen 105 LGNVADGLAFLHRS--AKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEY---DPPLPLLLQPHLNFLAPE 179 (700)
T ss_pred hhcccchhhhhccC--cceeecccchhheeeccCcceeeccchhhhccCCCCccccccC---CCCCChhhccCcccccch
Confidence 34456999999985 7899999999999999999999999998866554322111110 000011122234599999
Q ss_pred ccccCCCCCcccchHHHHHHHHHHHh-CCCCCC
Q 006522 536 ARIYGSKFTQKCDVYSFGIVLLEILT-GRLPDA 567 (642)
Q Consensus 536 ~~~~~~~~~~~sDV~S~Gvvl~el~t-G~~P~~ 567 (642)
++.. ...+.++|+||+||++|.+.. |+.-+.
T Consensus 180 ~~~~-~~~~~~sd~fSlG~li~~i~~~gk~i~~ 211 (700)
T KOG2137|consen 180 YLLG-TTNTPASDVFSLGVLIYTIYNGGKSIIA 211 (700)
T ss_pred hhcc-ccccccccceeeeeEEEEEecCCcchhh
Confidence 9554 677899999999999999995 444443
No 488
>PRK09902 hypothetical protein; Provisional
Probab=98.43 E-value=6.8e-06 Score=77.36 Aligned_cols=137 Identities=15% Similarity=0.110 Sum_probs=100.3
Q ss_pred CccCCceeEEEEecCCCCCCCCeEEEEEEecCC-Cc----cccHHHHHHHHHHHhcccC--CCeeeEEEEEE-eC----C
Q 006522 351 GKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEG-DA----TWRFKDFESEVEAIARVQH--PNIVRLKAFYY-AN----D 418 (642)
Q Consensus 351 g~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~-~~----~~~~~~~~~E~~~l~~l~H--~nIv~l~~~~~-~~----~ 418 (642)
|+||-+.|++..... +.+-+|+-... .. ......|.+|+..+.++.. -.+.+.. ++. .. -
T Consensus 27 ~rgG~SgV~r~~~~g-------~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~ 98 (216)
T PRK09902 27 RRNGMSGVQCVERNG-------KKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEW 98 (216)
T ss_pred CCCCcceEEEEEeCC-------cEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCce
Confidence 567888888876554 35888886522 11 2234789999999999953 3344544 332 21 1
Q ss_pred ceEEEEeeccC-CcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCC--eEEe
Q 006522 419 EKLLISDFIRN-GSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELH--PCIS 495 (642)
Q Consensus 419 ~~~lv~e~~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~--~kl~ 495 (642)
..+||+|-+.+ -||.+++..... .+.+...+..+..+|++.++-||. .++.|+|+-+.||+++.++. ++++
T Consensus 99 rA~LVTe~L~g~~~L~~~l~~~~~---~~~~~~~k~~il~~va~~ia~LH~---~Gv~Hgdly~khIll~~~g~~~v~lI 172 (216)
T PRK09902 99 RALLVTEDMAGFISIADWYAQHAV---SPYSDEVRQAMLKAVALAFKKMHS---VNRQHGCCYVRHIYVKTEGKAEAGFL 172 (216)
T ss_pred EEEEEEEeCCCCccHHHHHhcCCc---CCcchHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHhheeecCCCCeeEEEE
Confidence 36799997763 489998865432 236777888999999999999999 89999999999999986666 9999
Q ss_pred cccccc
Q 006522 496 GFGLNR 501 (642)
Q Consensus 496 DfGla~ 501 (642)
||--++
T Consensus 173 DlEk~r 178 (216)
T PRK09902 173 DLEKSR 178 (216)
T ss_pred Ehhccc
Confidence 997654
No 489
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.43 E-value=2.7e-08 Score=84.63 Aligned_cols=130 Identities=25% Similarity=0.305 Sum_probs=88.0
Q ss_pred eEEEcCCCCccccCCc---cccCCCCCCEEEccCCCCCCcccccccc-CCccceeeccCCcccccCcccccCCCCcCeEe
Q 006522 68 TSLYLPNRNLTGYMPS---ELGLLNSLTRLSLASNNFSKPIPANLFN-ATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLD 143 (642)
Q Consensus 68 ~~l~l~~~~l~g~~p~---~l~~l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 143 (642)
-.++|+++.|. .+++ .+.....|+..+|++|.|. .+|+.|.. .+.++.|+|++|+++ .+|..+..++.|+.|+
T Consensus 30 h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lN 106 (177)
T KOG4579|consen 30 HFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLN 106 (177)
T ss_pred hhcccccchhh-HHHHHHHHHhCCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcc
Confidence 34566666654 3343 3444556667788888886 46666653 457888888888888 6777788888888888
Q ss_pred cccccCCCcchhHhhhhccccceeecccccccccCCcccCCCCCCcEEEeecCCCCCCcC
Q 006522 144 LSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEIP 203 (642)
Q Consensus 144 Ls~N~l~~~~p~~~~~l~~l~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 203 (642)
++.|.|. ..|..+..|.++. .|+..+|.+. .+|-.+-.-+..-..++.+|.+.+.-|
T Consensus 107 l~~N~l~-~~p~vi~~L~~l~-~Lds~~na~~-eid~dl~~s~~~al~~lgnepl~~~~~ 163 (177)
T KOG4579|consen 107 LRFNPLN-AEPRVIAPLIKLD-MLDSPENARA-EIDVDLFYSSLPALIKLGNEPLGDETK 163 (177)
T ss_pred cccCccc-cchHHHHHHHhHH-HhcCCCCccc-cCcHHHhccccHHHHHhcCCcccccCc
Confidence 8888888 6777777788887 8888888776 344332222222334457777777666
No 490
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.41 E-value=1.9e-08 Score=85.49 Aligned_cols=104 Identities=27% Similarity=0.404 Sum_probs=54.6
Q ss_pred CCEEEccCCCCCCccccccc---cCCccceeeccCCcccccCcccc-cCCCCcCeEecccccCCCcchhHhhhhccccce
Q 006522 91 LTRLSLASNNFSKPIPANLF---NATNLVYLDLAHNSFCGPIPDRI-KTLKNLTHLDLSSNLLNGSLPEFLLDLRALTGT 166 (642)
Q Consensus 91 L~~L~Ls~N~l~~~~p~~~~---~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~ 166 (642)
+..|+|+++.|- .++.... ....|+..+|++|.|.. +|+.| ...+.++.|+|++|.++ .+|..+..++.|+ .
T Consensus 29 ~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk~-fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr-~ 104 (177)
T KOG4579|consen 29 LHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFKK-FPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALR-S 104 (177)
T ss_pred hhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhhh-CCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhh-h
Confidence 445555655552 3444333 23344445666666653 33333 23445666666666665 5555566666666 5
Q ss_pred eecccccccccCCcccCCCCCCcEEEeecCCCC
Q 006522 167 LNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLS 199 (642)
Q Consensus 167 l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 199 (642)
++++.|.|. ..|..+..+.+|..|+..+|.+.
T Consensus 105 lNl~~N~l~-~~p~vi~~L~~l~~Lds~~na~~ 136 (177)
T KOG4579|consen 105 LNLRFNPLN-AEPRVIAPLIKLDMLDSPENARA 136 (177)
T ss_pred cccccCccc-cchHHHHHHHhHHHhcCCCCccc
Confidence 666666665 33444444555555555555544
No 491
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.40 E-value=6.2e-09 Score=110.56 Aligned_cols=128 Identities=30% Similarity=0.384 Sum_probs=97.9
Q ss_pred CCCCEEEccCCCCCCccccccccCCccceeeccCCcccccCcccccCCCCcCeEecccccCCCcchhH-hhhhcccccee
Q 006522 89 NSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPDRIKTLKNLTHLDLSSNLLNGSLPEF-LLDLRALTGTL 167 (642)
Q Consensus 89 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~l~~~l 167 (642)
..|.+.+.+.|.|. .+...+.-++.|+.|||++|+++.. +.+..|+.|++|||++|.|. .+|.. ...+. |. .|
T Consensus 164 n~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~-L~-~L 237 (1096)
T KOG1859|consen 164 NKLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLR-HVPQLSMVGCK-LQ-LL 237 (1096)
T ss_pred hhHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhc-cccccchhhhh-he-ee
Confidence 35777888899986 5677788889999999999999854 37889999999999999998 55532 22233 66 89
Q ss_pred ecccccccccCCcccCCCCCCcEEEeecCCCCCCc--CccccccccCCcccCCCCCCCC
Q 006522 168 NLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSGEI--PQVGSLLNQGPTAFSGNPGLCG 224 (642)
Q Consensus 168 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~--p~~~~~~~~~~~~~~~n~~~~~ 224 (642)
++++|.++.. ..+.+|.+|+.|||++|-|++.- -.+..+..+..+++.|||--|.
T Consensus 238 ~lrnN~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c~ 294 (1096)
T KOG1859|consen 238 NLRNNALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCCA 294 (1096)
T ss_pred eecccHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccccC
Confidence 9999998743 34678899999999999998632 2234455566788999996664
No 492
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=98.40 E-value=8.7e-08 Score=96.67 Aligned_cols=133 Identities=23% Similarity=0.191 Sum_probs=73.0
Q ss_pred CEeEEEcCCCCccccC--CccccCCCCCCEEEccCCCCCCcccccc-ccCCccceeeccCCcccc-cCcccccCCCCcCe
Q 006522 66 RVTSLYLPNRNLTGYM--PSELGLLNSLTRLSLASNNFSKPIPANL-FNATNLVYLDLAHNSFCG-PIPDRIKTLKNLTH 141 (642)
Q Consensus 66 ~v~~l~l~~~~l~g~~--p~~l~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~ 141 (642)
.|+.|||+.|=+..+- -.-...|++|+.|+||.|+|.-...... ..+++|+.|.|+.+.|+- .+-.....+++|+.
T Consensus 147 ~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~ 226 (505)
T KOG3207|consen 147 NVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSHLKQLVLNSCGLSWKDVQWILLTFPSLEV 226 (505)
T ss_pred cceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhhhheEEeccCCCCHHHHHHHHHhCCcHHH
Confidence 5788888888776442 2344567888888888888763332222 245666677776666652 11122334566666
Q ss_pred EecccccCCCcchhHhhhhccccceeecccccccccC-CcccCCCCCCcEEEeecCCCC
Q 006522 142 LDLSSNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQI-PEMYGHFPVMVSLDLRNNNLS 199 (642)
Q Consensus 142 L~Ls~N~l~~~~p~~~~~l~~l~~~l~l~~N~l~~~~-p~~~~~l~~L~~L~l~~N~l~ 199 (642)
|+|.+|...+.--....-++.|+ .|+|++|++-... -...+.++.|..|+++.+.++
T Consensus 227 L~L~~N~~~~~~~~~~~i~~~L~-~LdLs~N~li~~~~~~~~~~l~~L~~Lnls~tgi~ 284 (505)
T KOG3207|consen 227 LYLEANEIILIKATSTKILQTLQ-ELDLSNNNLIDFDQGYKVGTLPGLNQLNLSSTGIA 284 (505)
T ss_pred hhhhcccccceecchhhhhhHHh-hccccCCcccccccccccccccchhhhhccccCcc
Confidence 66666642222222223344555 6666666654221 123455566666666666554
No 493
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=98.25 E-value=2.2e-07 Score=93.85 Aligned_cols=133 Identities=24% Similarity=0.233 Sum_probs=89.0
Q ss_pred CEeEEEcCCCCccccCC--ccccCCCCCCEEEccCCCCCCccc--cccccCCccceeeccCCcccccCcccc-cCCCCcC
Q 006522 66 RVTSLYLPNRNLTGYMP--SELGLLNSLTRLSLASNNFSKPIP--ANLFNATNLVYLDLAHNSFCGPIPDRI-KTLKNLT 140 (642)
Q Consensus 66 ~v~~l~l~~~~l~g~~p--~~l~~l~~L~~L~Ls~N~l~~~~p--~~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~ 140 (642)
.++.+.|.+....- ++ .....+++++.||||.|-|+...| .-...|++|+.|+|+.|++.-...+.. ..++.|+
T Consensus 122 kL~~IsLdn~~V~~-~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~lK 200 (505)
T KOG3207|consen 122 KLREISLDNYRVED-AGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSHLK 200 (505)
T ss_pred hhhheeecCccccc-cchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhhhh
Confidence 56666776665542 22 356678889999999998875433 224578899999999998874333322 2467888
Q ss_pred eEecccccCCC-cchhHhhhhccccceeecccccccccCCcccCCCCCCcEEEeecCCCCC
Q 006522 141 HLDLSSNLLNG-SLPEFLLDLRALTGTLNLSFNQFSGQIPEMYGHFPVMVSLDLRNNNLSG 200 (642)
Q Consensus 141 ~L~Ls~N~l~~-~~p~~~~~l~~l~~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 200 (642)
.|.|+.+.|+- .+-..+...++|. .|+|..|..-+.-.....-+..|++|||++|++-.
T Consensus 201 ~L~l~~CGls~k~V~~~~~~fPsl~-~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~ 260 (505)
T KOG3207|consen 201 QLVLNSCGLSWKDVQWILLTFPSLE-VLYLEANEIILIKATSTKILQTLQELDLSNNNLID 260 (505)
T ss_pred eEEeccCCCCHHHHHHHHHhCCcHH-HhhhhcccccceecchhhhhhHHhhccccCCcccc
Confidence 89999888872 1223345567777 88888885332333344456678889999888753
No 494
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.24 E-value=7.3e-06 Score=88.28 Aligned_cols=150 Identities=17% Similarity=0.272 Sum_probs=101.5
Q ss_pred cHHHHHhhcc-cccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccc-----------------------------
Q 006522 338 ELEDLLRASA-YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATW----------------------------- 387 (642)
Q Consensus 338 ~~~~~~~~~~-~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~----------------------------- 387 (642)
.++++...+. .-++.++-|.||+|++.+| +.||||+.+..-...
T Consensus 120 ~iee~F~eF~~~PiAsASIaQVH~A~L~sG------~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~ 193 (517)
T COG0661 120 PIEELFSEFEPEPIASASIAQVHRAVLKSG------EEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVE 193 (517)
T ss_pred CHHHHHHHcCCCchhhhhHhhheeEEecCC------CEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHH
Confidence 4556655554 7888999999999999997 899999987642111
Q ss_pred cH----------HHHHHHHHHHhccc-----CCCeeeEEEEEE-eCCceEEEEeeccCCcHHHHH--hcCCCCCCCCCCH
Q 006522 388 RF----------KDFESEVEAIARVQ-----HPNIVRLKAFYY-ANDEKLLISDFIRNGSLYAAL--HAGPSDSLPPLPW 449 (642)
Q Consensus 388 ~~----------~~~~~E~~~l~~l~-----H~nIv~l~~~~~-~~~~~~lv~e~~~~gsL~~~l--~~~~~~~~~~l~~ 449 (642)
.+ -++.+|+..+.+++ .++|. +=..|+ -.....|+|||++|-.+.+.. ...+ ++
T Consensus 194 vv~e~~~~l~~ElDy~~EA~n~~~~~~nf~~~~~v~-VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~g------~d- 265 (517)
T COG0661 194 VVDEFEKRLREELDYRREAANAERFRENFKDDPDVY-VPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAG------ID- 265 (517)
T ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCeE-eceeehhccCCcEEEEEeeCCEecccHHHHHhcC------CC-
Confidence 00 12566777777763 34433 323333 346789999999999998884 3322 33
Q ss_pred HHHHHHHHHHHHH-HHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCCC
Q 006522 450 EARLKIAQGTARG-LMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPGT 506 (642)
Q Consensus 450 ~~~~~i~~~ia~g-L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 506 (642)
+..++..++++ +..+=. .+++|.|..|.||+++.++++-+.|||+...+.+.
T Consensus 266 --~k~ia~~~~~~f~~q~~~---dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~~ 318 (517)
T COG0661 266 --RKELAELLVRAFLRQLLR---DGFFHADPHPGNILVRSDGRIVLLDFGIVGRLDPK 318 (517)
T ss_pred --HHHHHHHHHHHHHHHHHh---cCccccCCCccceEEecCCcEEEEcCcceecCCHH
Confidence 23333333332 111212 48999999999999999999999999998776543
No 495
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.17 E-value=3e-05 Score=75.37 Aligned_cols=138 Identities=14% Similarity=0.153 Sum_probs=83.0
Q ss_pred cccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCC--eeeEEEEEEeCCceEEEEe
Q 006522 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPN--IVRLKAFYYANDEKLLISD 425 (642)
Q Consensus 348 ~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~n--Iv~l~~~~~~~~~~~lv~e 425 (642)
..||+|..+.+|+. .+ ..+++|...... ......+|.++++.+..-. +.+.+++....+...+|||
T Consensus 7 ~~i~~G~t~~~y~~---~~------~~~VlR~~~~~~---~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e 74 (226)
T TIGR02172 7 TQTGEGGNGESYTH---KT------GKWMLKLYNPGF---DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYE 74 (226)
T ss_pred eeecCCCCcceeEe---cC------CCEEEEeCCCCC---CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeee
Confidence 45799999999983 12 346678776432 2255789999999986443 4667777777777789999
Q ss_pred eccCCc-HHHH---------------------HhcCCCCCCCCCCHHHHHH-HHH----------HHHH-HHHHHHhc-C
Q 006522 426 FIRNGS-LYAA---------------------LHAGPSDSLPPLPWEARLK-IAQ----------GTAR-GLMYIHEY-S 470 (642)
Q Consensus 426 ~~~~gs-L~~~---------------------l~~~~~~~~~~l~~~~~~~-i~~----------~ia~-gL~yLH~~-~ 470 (642)
+++|.+ +.+. +|.-... ......... +-. .+.. ...+|... .
T Consensus 75 ~i~G~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~---~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~ 151 (226)
T TIGR02172 75 LIVGKRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCD---TSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPD 151 (226)
T ss_pred ecCCccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCC---CCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCC
Confidence 999863 2111 2221110 011111100 100 0111 12222211 1
Q ss_pred CCCceecCCCCCCeeeCCCCCeEEecccccc
Q 006522 471 PRKYVHGNIKSTKILLDDELHPCISGFGLNR 501 (642)
Q Consensus 471 ~~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 501 (642)
...++|+|+.|.||++++++ +.|.||+.+.
T Consensus 152 ~~~~~HgD~~~~Nii~~~~~-~~iIDwe~a~ 181 (226)
T TIGR02172 152 TSTCLHGDFQIGNLITSGKG-TYWIDLGDFG 181 (226)
T ss_pred CCceEecCCCCCcEEEcCCC-cEEEechhcC
Confidence 23578999999999999888 9999998753
No 496
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.16 E-value=3.4e-08 Score=105.15 Aligned_cols=125 Identities=30% Similarity=0.377 Sum_probs=84.4
Q ss_pred EeEEEcCCCCccccCCccccCCCCCCEEEccCCCCCCccccccccCCccceeeccCCcccccCcc-cccCCCCcCeEecc
Q 006522 67 VTSLYLPNRNLTGYMPSELGLLNSLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFCGPIPD-RIKTLKNLTHLDLS 145 (642)
Q Consensus 67 v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~Ls 145 (642)
+...+.+.|.|. .+..++.-++.|+.|||++|+++..- .+..|+.|++|||+.|+|. .+|. ....+. |+.|+|+
T Consensus 166 L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~-L~~L~lr 240 (1096)
T KOG1859|consen 166 LATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLR-HVPQLSMVGCK-LQLLNLR 240 (1096)
T ss_pred HhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhc-cccccchhhhh-heeeeec
Confidence 344555666665 45667777888888888888887532 6778888888888888887 3443 223344 8888888
Q ss_pred cccCCCcchhHhhhhccccceeecccccccccC-CcccCCCCCCcEEEeecCCCC
Q 006522 146 SNLLNGSLPEFLLDLRALTGTLNLSFNQFSGQI-PEMYGHFPVMVSLDLRNNNLS 199 (642)
Q Consensus 146 ~N~l~~~~p~~~~~l~~l~~~l~l~~N~l~~~~-p~~~~~l~~L~~L~l~~N~l~ 199 (642)
+|.++. + ..+.+|++|. .||+++|-|++-- -..+..|..|..|+|.+|.|-
T Consensus 241 nN~l~t-L-~gie~LksL~-~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 241 NNALTT-L-RGIENLKSLY-GLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred ccHHHh-h-hhHHhhhhhh-ccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 888762 2 2456777777 7888888776431 122445666777888888774
No 497
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.12 E-value=6.6e-07 Score=94.78 Aligned_cols=183 Identities=18% Similarity=0.106 Sum_probs=131.0
Q ss_pred cccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCCC-eeeEEEEEEeCCceEEEEee
Q 006522 348 YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATWRFKDFESEVEAIARVQHPN-IVRLKAFYYANDEKLLISDF 426 (642)
Q Consensus 348 ~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~n-Iv~l~~~~~~~~~~~lv~e~ 426 (642)
.-.++++.+.+||.+.... +...++.+... ....-++++|.+++||| .++.++-+..++..+++++|
T Consensus 248 h~fvK~altknpKkRptae------klL~h~fvs~~------l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i 315 (829)
T KOG0576|consen 248 HNFVKGALTKNPKKRPTAE------KLLQHPFVSQT------LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRI 315 (829)
T ss_pred HHHHHHHhcCCCccCCChh------hheeceeeccc------hhhHHHHHHHHHccCCCCcccccccCCcccccchhhhh
Confidence 4567899999999876665 44446655432 34456889999999999 77777777777888999999
Q ss_pred ccCC-cHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCceecCCCCCCeeeCCCCCeEEecccccccCCC
Q 006522 427 IRNG-SLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSPRKYVHGNIKSTKILLDDELHPCISGFGLNRLLPG 505 (642)
Q Consensus 427 ~~~g-sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 505 (642)
+..| +-...... ....+...+...+.+.-.++++|+|+ -.-+||| ||+..+ ...|..||+....+..
T Consensus 316 ~s~~rs~~~~~~~----se~~~~~~~~~~~~r~et~~l~~l~~---~~~~~~d----~~l~s~-~~~~~~~~~v~~~L~~ 383 (829)
T KOG0576|consen 316 CSTGRSSALEMTV----SEIALEQYQFAYPLRKETRPLAELHS---SYKVHRD----NILGSE-EEVKLLDFAVPPQLTR 383 (829)
T ss_pred hcCCccccccCCh----hhHhhhhhhhhhhhhhhccccccccc---ccccCcc----cccccc-cccccccccCCcccCc
Confidence 9887 22111110 11124444556677778899999998 3458999 777765 6789999998876654
Q ss_pred CCcccccceeeecCCCcccccCCCcccCccccccCCCCCcccchHHHHHHHHHHHhCCCCCCC
Q 006522 506 TSKVTKNETIVTSGTGSRISAISNVYLAPEARIYGSKFTQKCDVYSFGIVLLEILTGRLPDAG 568 (642)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~sDV~S~Gvvl~el~tG~~P~~~ 568 (642)
.. ..+...+++.++|||+.. ...+..+.|+||.|+-..++.-|-.|-..
T Consensus 384 ~~-------------~~~t~~~~~~~~~pev~~-~~~~~~~p~~~~~~~~~~~~ap~~pPr~~ 432 (829)
T KOG0576|consen 384 TM-------------KPRTAIGTPEPLAPEVIQ-ENTIDGCPDSGSLAVSAIQMAPGLPPRSS 432 (829)
T ss_pred cc-------------ccccCCCCCCCCCchhhc-ccccccCCCccCCCcchhhcCCCCCCCCC
Confidence 31 122456788999999844 47888999999999877788778777543
No 498
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=98.08 E-value=1.1e-05 Score=75.84 Aligned_cols=103 Identities=16% Similarity=0.176 Sum_probs=81.2
Q ss_pred HHHHHHHhcccC-CCeeeEEEEEEeCCceEEEEeeccCCcHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC
Q 006522 393 ESEVEAIARVQH-PNIVRLKAFYYANDEKLLISDFIRNGSLYAALHAGPSDSLPPLPWEARLKIAQGTARGLMYIHEYSP 471 (642)
Q Consensus 393 ~~E~~~l~~l~H-~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~ 471 (642)
..|.-+|+.+.+ +++.+++|+|- .++|.||...+++.+.-.. ......-+|..|.+||.++++.+.++++...
T Consensus 7 ~~E~lll~~l~~~~~~pk~lG~CG----~~~v~E~~~~~~~~~~~~~--l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~ 80 (188)
T PF12260_consen 7 NNEPLLLQLLQGSEPFPKLLGSCG----RFYVVEYVGAGSLYGIYRP--LSQFLQSPWEQRAKIALQLLELLEELDHGPL 80 (188)
T ss_pred ccHHHHHHHcCCCCCCCCeeeECC----CEEEEEeecCccccccccc--cccccccCHHHHHHHHHHHHHHHHHHhcCCC
Confidence 358888999976 69999999993 4779999998776532100 0000126899999999999999999988555
Q ss_pred CCceecCCCCCCeeeCCCCCeEEecccccc
Q 006522 472 RKYVHGNIKSTKILLDDELHPCISGFGLNR 501 (642)
Q Consensus 472 ~~iiHrDlkp~NILl~~~~~~kl~DfGla~ 501 (642)
..+.-.|++++|+-+++++++|+.|..-..
T Consensus 81 ~~~~lcDv~~~nfgv~~~~~lk~iDld~v~ 110 (188)
T PF12260_consen 81 GFFYLCDVSPDNFGVNDDGRLKLIDLDDVF 110 (188)
T ss_pred CcEEEeecchHHeEEeCCCcEEEEechhcc
Confidence 568899999999999999999999987554
No 499
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=98.07 E-value=4e-06 Score=57.97 Aligned_cols=36 Identities=33% Similarity=0.550 Sum_probs=15.2
Q ss_pred CCCEEEccCCCCCCccccccccCCccceeeccCCccc
Q 006522 90 SLTRLSLASNNFSKPIPANLFNATNLVYLDLAHNSFC 126 (642)
Q Consensus 90 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 126 (642)
+|++|+|++|+|+ .+|+.+.+|++|+.|+|++|+++
T Consensus 2 ~L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 2 NLEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp T-SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCS
T ss_pred cceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCC
Confidence 3444444444444 23434444444444444444443
No 500
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.02 E-value=2.4e-05 Score=84.08 Aligned_cols=150 Identities=13% Similarity=0.204 Sum_probs=98.2
Q ss_pred ccHHHHHhhcc-cccCccCCceeEEEEecCCCCCCCCeEEEEEEecCCCccc----------------------------
Q 006522 337 LELEDLLRASA-YVVGKSKNGIMYKVVVGRGSGMGAPTVVAVRRLTEGDATW---------------------------- 387 (642)
Q Consensus 337 ~~~~~~~~~~~-~~lg~g~~g~vy~~~~~~~~~~~~~~~vavK~~~~~~~~~---------------------------- 387 (642)
-.++++...+. .-||.-+.|.||+++++.| ..||||+-+..-...
T Consensus 155 ~~ie~if~~f~~~piaaASlaQVhrA~L~~G------~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lv 228 (538)
T KOG1235|consen 155 APIEDIFSEFDEEPIAAASLAQVHRARLKNG------EDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLV 228 (538)
T ss_pred CCHHHHHHhcCcchhhhcchhheEEEEecCC------CEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHH
Confidence 45666666554 7899999999999999997 899999977642111
Q ss_pred --------cHHHHHHHHHHHhcc----cCCC---eeeEEEEEEe-CCceEEEEeeccCCcHHHHH--hcCCCCCCCCCCH
Q 006522 388 --------RFKDFESEVEAIARV----QHPN---IVRLKAFYYA-NDEKLLISDFIRNGSLYAAL--HAGPSDSLPPLPW 449 (642)
Q Consensus 388 --------~~~~~~~E~~~l~~l----~H~n---Iv~l~~~~~~-~~~~~lv~e~~~~gsL~~~l--~~~~~~~~~~l~~ 449 (642)
..-+|.+|++-..++ +|-+ =|.+=..+++ .....|+||||+|..+.|.- ...+ ++-
T Consensus 229 dE~~~~L~~ELDF~~EA~Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i~~~g------i~~ 302 (538)
T KOG1235|consen 229 DEIAKSLPQELDFTKEAKNAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAIDKRG------ISP 302 (538)
T ss_pred HHHHhhhHhhcchHHHHHhHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCHHHHHHcC------CCH
Confidence 001356777666555 3555 1112222332 24689999999998876653 3332 333
Q ss_pred HHHHHHHHHHHHHHHH--HHhcCCCCceecCCCCCCeeeC----CCCCeEEecccccccCCC
Q 006522 450 EARLKIAQGTARGLMY--IHEYSPRKYVHGNIKSTKILLD----DELHPCISGFGLNRLLPG 505 (642)
Q Consensus 450 ~~~~~i~~~ia~gL~y--LH~~~~~~iiHrDlkp~NILl~----~~~~~kl~DfGla~~~~~ 505 (642)
. .|+..+.++... ++ .|++|+|-.|.||++. .+..+.+-|||+......
T Consensus 303 ~---~i~~~l~~~~~~qIf~----~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~ 357 (538)
T KOG1235|consen 303 H---DILNKLVEAYLEQIFK----TGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISH 357 (538)
T ss_pred H---HHHHHHHHHHHHHHHh----cCCccCCCCCCcEEEecCCCCCccEEEEcccccccccH
Confidence 3 333333333222 22 4799999999999998 478899999999876654
Done!