Your job contains 1 sequence.
>006527
MEEPKKFSTQPTAYTSNSLQTSFGTAPENRGTSHTVRMFPLDKLLNNDARPPTVSTGLPS
SHLGRDSSSLALPRVEKPQVKLDGGSNGSSYVSQVQANASANHPLVNAPTWSVQPQSASS
AKAVLENKVPNHIPVKLEGPADMSRTAPQAVRDQSFRPFISQTGNMPNVHQPLQGTNIVQ
APQFGSNHGEIAKIVQKLLHPKLPQHPTWTPPSREYMSKAFTCQICKLTANEVETVVLCD
ACEKGFHLKCLQMNNQKGIPRGGEWHCMSCLKLSNGKPLPPKYGRVMRSINTTKMPSNTS
VIQSPSDKKFISVDQKVNNQQKITVNGSSGGSGALGSNSNDCDLKIHNIRATQGGNLVSS
TKSKDQETSSGTYPSNVTKPLGVVPPPGDSHGPIQSTQVCESSTQLEKLASESKSEHPAI
SSETVSNHSAASQPSHNSQVVRTDLANSAEVSLKNSHDSSSTIKQDEEVVGRLNPVGNSV
ISSDALHNVQWIGDVLQIVDGKKFYQSCRIGGVTYKVKDHVLLHSSNNKLMPSKLQTMWE
DTGTGSKWVMVNRCFFPGDLPEAVGCPCAPESNELYESNNESSVMAGLIRGPCEVLPPGK
FKEENERLNHLGNEANKGRHPVFLCQWFYDELKGVFRPVSG
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 006527
(641 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2008051 - symbol:AT1G50620 "AT1G50620" species... 568 4.8e-55 1
TAIR|locus:2092414 - symbol:AT3G20280 "AT3G20280" species... 483 1.3e-45 1
UNIPROTKB|E9PE19 - symbol:BPTF "Nucleosome-remodeling fac... 106 8.6e-05 2
TAIR|locus:2096672 - symbol:MBD9 "methyl-CPG-binding doma... 104 0.00019 2
FB|FBgn0029861 - symbol:CG3815 species:7227 "Drosophila m... 112 0.00021 2
TAIR|locus:2169779 - symbol:ATXR6 "AT5G24330" species:370... 116 0.00033 2
>TAIR|locus:2008051 [details] [associations]
symbol:AT1G50620 "AT1G50620" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 EMBL:CP002684 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 EMBL:AC079279 HSSP:Q13263 IPI:IPI00525631
PIR:G96542 RefSeq:NP_175477.1 UniGene:At.15785
ProteinModelPortal:Q9C6P8 SMR:Q9C6P8 PRIDE:Q9C6P8
EnsemblPlants:AT1G50620.1 GeneID:841484 KEGG:ath:AT1G50620
TAIR:At1g50620 InParanoid:Q9C6P8 OMA:AMNPIVE PhylomeDB:Q9C6P8
ProtClustDB:CLSN2912810 ArrayExpress:Q9C6P8 Genevestigator:Q9C6P8
Uniprot:Q9C6P8
Length = 629
Score = 568 (205.0 bits), Expect = 4.8e-55, P = 4.8e-55
Identities = 150/432 (34%), Positives = 218/432 (50%)
Query: 46 NNDARPPTVSTGLPSSHLGRDSSSLALPRVEKPQVKLDGGSNGSSYVSQVQANASANHPL 105
N++ + S SH R++S + R+E+PQ K D + SQ A + N+
Sbjct: 163 NSEMKASASSVNASGSHYVREASGITQARMERPQFKSDLHTG----TSQGPAVPAGNY-F 217
Query: 106 VNAPTWSVQPQSASSAKAVLENKVPNHIPVKLEGPADMSRTAPQAVRDQSFRPFISQTGN 165
N TWS QP S++S + + +PV P+ SR + D SFRPF+SQT
Sbjct: 218 GNTTTWSAQPHSSTSTIS-FGTASDSKVPV----PSS-SR-----ISDPSFRPFMSQTP- 265
Query: 166 MPNVHQPLQGTNIVQAPQ-FGSN-HGEIAKIVQKLLHPKLPQHPTWTPPSREYMSKAFTC 223
P ++G Q FG+N H EIAK++ K+L P+ Q+ W PPSREYMSKA TC
Sbjct: 266 -PGAFPGMKGATYGQTSSPFGNNNHAEIAKLIHKVLQPRAKQNLLWNPPSREYMSKAMTC 324
Query: 224 QICKLTANEVETVVLCDACEKGFHLKCLQMNNQKGIPRGGEWHCMSCLKLSNGKPLPPKY 283
QIC+ T NE+ETV++CDACEKG+HLKCL +N KG+P+ EWHC C++L NGK PPKY
Sbjct: 325 QICQGTINEIETVLICDACEKGYHLKCLHAHNIKGVPKS-EWHCSRCVQLYNGKSFPPKY 383
Query: 284 GRVMRSINTTKMPSNTSVIQSPSDKKFISVDQKVNNQQKITVXXXXXXXXXXXXXXXDC- 342
GRVMRS T KM S+T+ +Q P++K +DQKV+ + + +
Sbjct: 384 GRVMRSATTAKMSSSTAEVQLPAEKGVGKMDQKVSQEGMPHLETAKPTKDSAMEQTVEAE 443
Query: 343 DLKIHNIRATQGGNLVSSTKSKDQ---ETSSGTYPSNVTKPLGVVPPPGDSHGPIQSTQV 399
D+ ++ I +V + + E G V K + + D+ I
Sbjct: 444 DVAMNPIVEKAMSEMVEAEGAAINPIVEAEDGAMNPIVEKAMSQIVEAEDA--AINQAVD 501
Query: 400 CESSTQLEKLASESKSEHPAISSETVSNHSAASQPS-HNSQVVRTDLAN---SAEVSLKN 455
TQ +++S+ P SE VS+ + P +V+R D SA+ KN
Sbjct: 502 ANFQTQAPTGNDDAESDDP---SEPVSHSETLNPPELEKKEVMRKDATERSVSADCQDKN 558
Query: 456 SHDSSSTIKQDE 467
S + + Q+E
Sbjct: 559 SKIIAESSLQEE 570
>TAIR|locus:2092414 [details] [associations]
symbol:AT3G20280 "AT3G20280" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 EMBL:CP002686 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 EMBL:AB024036 IPI:IPI00548743 RefSeq:NP_851007.1
UniGene:At.26379 ProteinModelPortal:A8MQI3 SMR:A8MQI3
EnsemblPlants:AT3G20280.1 GeneID:821572 KEGG:ath:AT3G20280
ProtClustDB:CLSN2680002 Genevestigator:A8MQI3 Uniprot:A8MQI3
Length = 743
Score = 483 (175.1 bits), Expect = 1.3e-45, P = 1.3e-45
Identities = 108/275 (39%), Positives = 147/275 (53%)
Query: 52 PTVSTGLPSSHLGRDSSSLALPRVEKPQVKLDGGSNGSSYVSQVQANASANHPLVNAPTW 111
P S P + S + P E G V AS P V++ +
Sbjct: 153 PNGSLASPGGLANKASVAHQWPSSEVATANTSGSHFKLDRPQMVLNGASQGTP-VSSANY 211
Query: 112 SVQPQSASSAKAVLENKVPNH-IPVKLEGPADMSRTAPQAVRDQSFRPFISQTGNMPNVH 170
+P SA + + P+ +P++ RTA D SFRPF + G +
Sbjct: 212 YAEPWSAQLPSTISFSTAPDKKVPIQ-----SSVRTA-----DPSFRPF--RHGTFTGTN 259
Query: 171 QPLQGTNIVQAPQFGSNHGEIAKIVQKLLHPKLPQHPTWTPPSREYMSKAFTCQICKLTA 230
QP+ + Q FG NH EIAKI+ K L P++ Q+P W PPSREYMS+A CQIC++T
Sbjct: 260 QPMHYS---QTSSFGGNHTEIAKIIHKFLQPRVKQYPLWNPPSREYMSRAMACQICEVTI 316
Query: 231 NEVETVVLCDACEKGFHLKCLQMNNQKGIPRGGEWHCMSCLKLSNGKPLPPKYGRVMRSI 290
NE++T+++CDACEK +HLKCLQ NN KG+P+ EWHC C++ NGKP PP YGR R++
Sbjct: 317 NEMDTLLICDACEKAYHLKCLQGNNMKGVPKS-EWHCSRCVQAFNGKPFPPTYGRATRAV 375
Query: 291 NTT--KMPSNTSVIQSPSDKKFISVDQKVNNQQKI 323
TT KMP + + S S KK +D K N Q+ I
Sbjct: 376 ATTTAKMPFRAAGVLSSSAKKIGPMDIKANQQKPI 410
>UNIPROTKB|E9PE19 [details] [associations]
symbol:BPTF "Nucleosome-remodeling factor subunit BPTF"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 SMART:SM00249 SMART:SM00297
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 EMBL:AC006534
EMBL:AC107377 EMBL:AC134407 HGNC:HGNC:3581 ChiTaRS:BPTF
IPI:IPI00384109 PRIDE:E9PE19 Ensembl:ENST00000342579
UCSC:uc002jgh.3 ArrayExpress:E9PE19 Bgee:E9PE19 Uniprot:E9PE19
Length = 650
Score = 106 (42.4 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 48/228 (21%), Positives = 94/228 (41%)
Query: 12 TAYTSNSLQTSFGTAPENRGTSHTVRMFPLDKLLNNDARPPTVSTGL-PSSHLGRDSSSL 70
TA T+++ T+ T G ++ P ++ + PP S+ + P+ + +
Sbjct: 32 TATTASTTTTTVSTTAAGTGEQRQSKLSPQMQVHQDKTLPPAQSSSVGPAEAQPQTAQPS 91
Query: 71 ALPRVE-KPQVKLDGGSNGSSYVSQVQANASANHPLVNAPTWSVQPQSASSAKAVLENKV 129
A P+ + +PQ V Q Q S++ P PT + + +A++ ++ V
Sbjct: 92 AQPQPQTQPQSPAQPEVQTQPEV-QTQTTVSSHVPSEAQPTHAQSSKPQVAAQSQPQSNV 150
Query: 130 PNHIPVKLEGPADMSRTAPQAVRDQSFRPFISQTGNMPNVHQPLQGTNIVQAPQFGSNHG 189
PV+++ P+ +R P + Q SQ + P+Q +Q P G
Sbjct: 151 QGQSPVRVQSPSQ-TRIRP-STPSQLSPGQQSQVQTTTSQPIPIQPHTSLQIPSQGQPQS 208
Query: 190 EIAKIVQK--LLHPKLPQHPTWTPPSREYMSKAFTC-QICKLTANEVE 234
+ ++V K + L Q + TP RE + C Q+ K ++++
Sbjct: 209 Q-PQVVMKHNAVIEHLKQKKSMTPAEREENQRMIVCNQVMKYILDKID 255
Score = 71 (30.1 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 26/91 (28%), Positives = 42/91 (46%)
Query: 213 SREYMSKAFTCQICKLTANEVETVVLCDACEKGFHLKCLQMNNQKGIPRGGEWHCMSCLK 272
++E S+ C IC+ +E + + CD C+ +H +C+ + Q E+ C C
Sbjct: 464 AQEGSSEELYC-ICRTPYDESQFYIGCDRCQNWYHGRCVGIL-QSEAELIDEYVCPQCQS 521
Query: 273 LSNGK----PLPPK-Y-G--RVMRSINTTKM 295
+ PL K Y G RV+RS+ KM
Sbjct: 522 TEDAMTVLTPLTEKDYEGLKRVLRSLQAHKM 552
Score = 62 (26.9 bits), Expect = 0.00071, Sum P(2) = 0.00070
Identities = 13/52 (25%), Positives = 24/52 (46%)
Query: 225 ICKLTANEVETVVLCDACEKGFHLKCLQMNNQKGIPRGGEWHCMSCLKLSNG 276
ICK +E + + CD C +H +C+ + +K + + C C + G
Sbjct: 417 ICKTPYDESKFYIGCDLCTNWYHGECVGIT-EKEAKKMDVYICNDCKRAQEG 467
>TAIR|locus:2096672 [details] [associations]
symbol:MBD9 "methyl-CPG-binding domain 9" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;IDA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008327 "methyl-CpG binding"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0010223 "secondary shoot
formation" evidence=IMP] [GO:0043966 "histone H3 acetylation"
evidence=IMP] [GO:0043967 "histone H4 acetylation" evidence=IMP]
[GO:0048573 "photoperiodism, flowering" evidence=IMP] [GO:0004402
"histone acetyltransferase activity" evidence=IDA] [GO:0016573
"histone acetylation" evidence=IDA] [GO:0042393 "histone binding"
evidence=IPI] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0007155
"cell adhesion" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0010090 "trichome
morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0045010 "actin nucleation" evidence=RCA] [GO:0048765 "root hair
cell differentiation" evidence=RCA] [GO:0071555 "cell wall
organization" evidence=RCA] InterPro:IPR001841 InterPro:IPR001739
InterPro:IPR001965 InterPro:IPR003888 InterPro:IPR003889
InterPro:IPR016177 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01429
Pfam:PF05964 Pfam:PF05965 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50302 PROSITE:PS50982 PROSITE:PS51542
PROSITE:PS51543 SMART:SM00184 SMART:SM00249 Prosite:PS00518
GO:GO:0009506 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0006355 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
SUPFAM:SSF54171 GO:GO:0043967 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0048573 EMBL:AC009325 PROSITE:PS00633
GO:GO:0010223 GO:GO:0043966 GO:GO:0004402 GO:GO:0008327
EMBL:AC010870 eggNOG:NOG79337 UniGene:At.41275 UniGene:At.47815
HSSP:Q14839 IPI:IPI00538023 RefSeq:NP_186795.1
ProteinModelPortal:Q9SGH2 SMR:Q9SGH2 PaxDb:Q9SGH2 PRIDE:Q9SGH2
EnsemblPlants:AT3G01460.1 GeneID:821132 KEGG:ath:AT3G01460
TAIR:At3g01460 HOGENOM:HOG000153462 InParanoid:Q9SGH2 OMA:GTRIRKC
PhylomeDB:Q9SGH2 ProtClustDB:CLSN2684998 Genevestigator:Q9SGH2
Uniprot:Q9SGH2
Length = 2176
Score = 104 (41.7 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 34/125 (27%), Positives = 52/125 (41%)
Query: 146 TAPQAVRDQSFRPFISQTGNMPNVHQPLQGTNIVQAPQFGSNHGEIAKIVQKLLHPKLPQ 205
T AV+++S R F+ N L G A Q E ++V+ + H P
Sbjct: 14 TKTAAVKEES-RSFLGIDLNEIPTGATLGGG--CTAGQDDDGEYEPVEVVRSI-HDN-PD 68
Query: 206 HPTWTPPSREYMSKAFTCQICKLTANEVETVVLCDACEKGFHLKCLQMNNQKGIPRGGEW 265
P + +C C +E VV+CDACE+GFH+ C+ + + P +W
Sbjct: 69 PAPGAPAEVPEPDRDASCGACG-RPESIELVVVCDACERGFHMSCVN-DGVEAAP-SADW 125
Query: 266 HCMSC 270
C C
Sbjct: 126 MCSDC 130
Score = 81 (33.6 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 38/127 (29%), Positives = 59/127 (46%)
Query: 363 SKDQETSSGTYPS-NVTK-PLGVVPPPGDSHGPIQSTQVCESSTQLEKLASESKSEHP-A 419
++D ETSS Y + N K PL PG+SH +++ SS E ++S + E P A
Sbjct: 1486 TRDDETSSTAYLNKNQGKSPLETDTQPGESHVNFGESKI--SSP--ETISSPGRHELPIA 1541
Query: 420 ISSETVSNHSAASQPSHN--SQVVR---TDLANSAEVSLKNSHDSSSTIKQDEEVVGR-L 473
+S V+++ S V R T NS V L +HD+SS Q+ + + L
Sbjct: 1542 DTSPLVTDNLPEKDTSETLLKSVGRNHETHSPNSNAVELPTAHDASSQASQELQACQQDL 1601
Query: 474 NPVGNSV 480
+ N +
Sbjct: 1602 SATSNEI 1608
>FB|FBgn0029861 [details] [associations]
symbol:CG3815 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0070822 "Sin3-type complex" evidence=IDA]
InterPro:IPR000253 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50006 PROSITE:PS50016 SMART:SM00249
GO:GO:0046872 EMBL:AE014298 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0070822 HSSP:Q14839
eggNOG:NOG145066 GeneTree:ENSGT00440000033777 EMBL:AY069054
RefSeq:NP_572311.1 UniGene:Dm.2312 SMR:Q9W410 IntAct:Q9W410
MINT:MINT-921456 STRING:Q9W410 EnsemblMetazoa:FBtr0070899
GeneID:31571 KEGG:dme:Dmel_CG3815 UCSC:CG3815-RA
FlyBase:FBgn0029861 InParanoid:Q9W410 OMA:SEFGTEV OrthoDB:EOG45HQC9
GenomeRNAi:31571 NextBio:774240 Uniprot:Q9W410
Length = 878
Score = 112 (44.5 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 38/136 (27%), Positives = 58/136 (42%)
Query: 190 EIAKIVQKLLHPKLPQHPTWTPPSREYMSKAFTCQICKLTANEVETVVLCDACEKGFHLK 249
E K++Q+ + K HP + P R + C C+ N ++ CD C FHL+
Sbjct: 28 EDEKMMQRSTNTK---HPYYRRPGRGHNHDY--CDACEEGGN----LLCCDRCPSSFHLQ 78
Query: 250 CLQMN-NQKGIPRGGEWHCMSCL--KLSNGKPLPPKYGRVMRSINTTKMPSNTSVIQSPS 306
C +++ IP G+W C SC KLS PP S+ + S +PS
Sbjct: 79 CHDPPLSEEDIP-SGQWLCHSCRMSKLSQ----PPASSSKASSVERVPSAGSGSRANTPS 133
Query: 307 DKKFISVDQKVNNQQK 322
S+ K+ N +K
Sbjct: 134 SGDLESIPLKIRNLRK 149
Score = 64 (27.6 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 29/101 (28%), Positives = 46/101 (45%)
Query: 388 GDSHG-PIQSTQVCESSTQLEKLASESKSEHPAISSETVSNHSAASQPSHNSQVVRTDLA 446
GDS P + E++T +K+ E +E+P T SN A+ QPS VV+ +
Sbjct: 445 GDSDSDPSPEEKRTETNTPADKVNGEVDTENP----NTESNAQASEQPS----VVKVESK 496
Query: 447 NSAEVSLKNSHDSSSTIKQDEEVVGRLNPVGNSVISSDALH 487
S EV ++ ++DEE + +I +D LH
Sbjct: 497 TSLEVE--------ASFEEDEEDSKK----STGIIDADLLH 525
>TAIR|locus:2169779 [details] [associations]
symbol:ATXR6 "AT5G24330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009901 "anther dehiscence" evidence=IMP] [GO:0051726
"regulation of cell cycle" evidence=IEP] [GO:0046976 "histone
methyltransferase activity (H3-K27 specific)" evidence=IDA]
[GO:0070734 "histone H3-K27 methylation" evidence=IDA] [GO:0006275
"regulation of DNA replication" evidence=IGI;RCA] [GO:0000280
"nuclear division" evidence=RCA] [GO:0000911 "cytokinesis by cell
plate formation" evidence=RCA] [GO:0006261 "DNA-dependent DNA
replication" evidence=RCA] [GO:0010389 "regulation of G2/M
transition of mitotic cell cycle" evidence=RCA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0051225 "spindle assembly"
evidence=RCA] Pfam:PF00856 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50280
SMART:SM00249 SMART:SM00317 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006275 GO:GO:0046872 EMBL:AB016884
GO:GO:0008270 EMBL:AB006701 GO:GO:0051726 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0009901
InterPro:IPR019786 PROSITE:PS01359 EMBL:BT012223 EMBL:BT012421
IPI:IPI00543408 RefSeq:NP_197821.1 UniGene:At.30965
ProteinModelPortal:Q9FNE9 SMR:Q9FNE9 DIP:DIP-48530N STRING:Q9FNE9
PRIDE:Q9FNE9 EnsemblPlants:AT5G24330.1 GeneID:832503
KEGG:ath:AT5G24330 TAIR:At5g24330 eggNOG:NOG305320
HOGENOM:HOG000238747 InParanoid:Q9FNE9 OMA:VICPDRR PhylomeDB:Q9FNE9
ProtClustDB:CLSN2686326 Genevestigator:Q9FNE9 GermOnline:AT5G24330
GO:GO:0046976 Uniprot:Q9FNE9
Length = 349
Score = 116 (45.9 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 28/85 (32%), Positives = 43/85 (50%)
Query: 223 CQICKLTANEVETVVLCDACEKGFHLKCLQMNNQKGIPRGGEWHCMSCLKLSNGKPLPPK 282
C+ C + + ++LCD C+KGFHL CL+ +P+G W C SC K K P
Sbjct: 35 CEECS-SGKQPAKLLLCDKCDKGFHLFCLRPI-LVSVPKGS-WFCPSCSKHQIPKSFPLI 91
Query: 283 YGRVMRSINTTKMPSNTSVIQSPSD 307
+++ + P ++S I S SD
Sbjct: 92 QTKIIDFFRIKRSP-DSSQISSSSD 115
Score = 47 (21.6 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 425 VSNHSAASQPSHNSQVVRTDLANSAEVSLKNSHDSS 460
++NHS + N + VR ++ A V L + D S
Sbjct: 292 INNHSPEGRKKQNLKCVRFNINGEARVLLVANRDIS 327
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.312 0.128 0.384 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 641 613 0.00088 120 3 11 23 0.47 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 6
No. of states in DFA: 622 (66 KB)
Total size of DFA: 352 KB (2175 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 68.12u 0.12s 68.24t Elapsed: 00:00:03
Total cpu time: 68.12u 0.12s 68.24t Elapsed: 00:00:03
Start: Tue May 21 09:09:19 2013 End: Tue May 21 09:09:22 2013