Query 006528
Match_columns 641
No_of_seqs 387 out of 2072
Neff 6.4
Searched_HMMs 29240
Date Tue Mar 26 18:49:26 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/006528.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_2154-2158//hhsearch_pdb/006528hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fpq_A Serine/threonine-protei 1.0 1 1 453.5 28.4 258 2-261 29-289 (290)
2 4fie_A Serine/threonine-protei 1.0 1 1 431.8 25.1 250 2-262 154-408 (423)
3 4fih_A Serine/threonine-protei 1.0 1 1 430.8 23.7 250 2-262 77-331 (346)
4 4b9d_A Serine/threonine-protei 1.0 1 1 429.8 22.0 252 2-262 27-284 (350)
5 4aw0_A HPDK1, 3-phosphoinositi 1.0 1 1 429.0 20.6 256 2-266 35-302 (311)
6 3ubd_A Ribosomal protein S6 ki 1.0 1 1 420.7 15.4 256 1-266 26-293 (304)
7 3v5w_A G-protein coupled recep 1.0 1 1 418.1 23.4 260 1-267 191-462 (689)
8 4g3f_A NF-kappa-beta-inducing 1.0 1 1 416.1 20.5 240 2-255 61-310 (336)
9 3hyh_A Carbon catabolite-derep 1.0 1 1 414.6 22.5 251 1-261 15-269 (275)
10 3uto_A Twitchin; kinase, muscl 1.0 1 1 407.2 23.6 254 2-264 160-420 (573)
No 1
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=1.00 E-value=1 Score=453.54 Aligned_cols=258 Identities=52% Similarity=0.905 Sum_probs=236.8
Q ss_pred EEEEEECCCCCEEEEEEEECCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEE--CCCCEEEE
Q ss_conf 9999928418648999998689929999998636656893569999999999981799981136589992--89766999
Q 006528 2 RILISSRRIPAVDTYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVD--DKKKTVNM 79 (641)
Q Consensus 2 RIl~~lG~GafgtVYkA~d~~tG~~VAiK~i~~~~~~~~~~~~~~l~~Ei~iLk~L~HpNIVkl~~~~~~--~~~~~l~l 79 (641)
++-..+|+|+||+||+|.+..+|..||+|.+..... .....+++.+|+.+|++|+|||||++|++|.+ ....++++
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~--~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~l 106 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL--TKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred EEEEEEECCCCCEEEEEEECCCCEEEEEEEECHHHC--CHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCEEEE
T ss_conf 950697007385999999889990999999832547--989999999999999867998999198899643678868999
Q ss_pred EECCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEECCCCCEEEEECCHHHHCCCCC
Q ss_conf 98057999999999957999999999999999999999982899927303677938992899948995144023215898
Q 006528 80 ITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQPT 159 (641)
Q Consensus 80 V~Ey~~gGsL~~~l~~~~~l~e~~i~~i~~QIl~aL~yLHs~gppIiHrDLKp~NILI~~~~g~IKL~DFGlA~~~~~~~ 159 (641)
|||||+||+|.+++++.+.+++..++.|++||+.||.|||+++++|+||||||+|||+++..|.+||+|||+|+......
T Consensus 107 vmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~~ 186 (290)
T 3fpq_A 107 VTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASF 186 (290)
T ss_dssp EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTTS
T ss_pred EEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHEEEECCCCCEEEEECCCCEECCCCC
T ss_conf 99487978999999866999999999999999999999997799887164574266588899988997276887679876
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 75445898777732222457843331110100234531567999999979999999729998754567817899999993
Q 006528 160 ARSVIGTPEFMAPELYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKC 239 (641)
Q Consensus 160 ~~~~~GTp~ymAPEvl~~~ys~ksDIwSlGiil~ELltG~~Pf~~~~~~~~i~~~i~~g~~~~~l~~~~~~~l~~LI~kc 239 (641)
..+.+|||.|||||++.+.|+.++|||||||++|||+||+.||.+..+..+++..+..+..+..++...++++++||.+|
T Consensus 187 ~~~~~GTp~YmAPE~~~~~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~~ 266 (290)
T 3fpq_A 187 AKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGC 266 (290)
T ss_dssp BEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHH
T ss_pred CCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 67762480201897807999927888879999999997889999998199999999738998777765789999999997
Q ss_pred CC-CCCCCCCHHHHHCCCCCCCC
Q ss_conf 49-98999899999729334434
Q 006528 240 LV-PASERLSAKDLLKDPFLQVE 261 (641)
Q Consensus 240 L~-dP~~RpSa~eLL~Hpfl~~~ 261 (641)
|. +|.+|||+.++|+||||+..
T Consensus 267 L~~dP~~R~s~~e~l~Hp~~~~~ 289 (290)
T 3fpq_A 267 IRQNKDERYSIKDLLNHAFFQEE 289 (290)
T ss_dssp SCSSGGGSCCHHHHHTSGGGC--
T ss_pred CCCCHHHCCCHHHHHCCCCCCCC
T ss_conf 63896579199999569040589
No 2
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=1.00 E-value=1 Score=431.80 Aligned_cols=250 Identities=28% Similarity=0.500 Sum_probs=220.2
Q ss_pred EEEEEECCCCCEEEEEEEECCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEEEEEE
Q ss_conf 99999284186489999986899299999986366568935699999999999817999811365899928976699998
Q 006528 2 RILISSRRIPAVDTYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMIT 81 (641)
Q Consensus 2 RIl~~lG~GafgtVYkA~d~~tG~~VAiK~i~~~~~~~~~~~~~~l~~Ei~iLk~L~HpNIVkl~~~~~~~~~~~l~lV~ 81 (641)
+++..||+|+||+||+|.++.+|..||+|++.+... ...+.+.+|+.+|+.|+|||||++|++|.+. ..+||||
T Consensus 154 ~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~----~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~--~~~~iVm 227 (423)
T 4fie_A 154 DNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ----QRRELLFNEVVIMRDYQHENVVEMYNSYLVG--DELWVVM 227 (423)
T ss_dssp EEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTC----SSGGGHHHHHHHHHHCCCTTBCCEEEEEEET--TEEEEEE
T ss_pred EEEEEECCCCCCEEEEEEECCCCCEEEEEEEECCCH----HHHHHHHHHHHHHHHCCCCCCCCEEEEEEEC--CEEEEEE
T ss_conf 861696248184899999999998999999862554----6899999999999857998987168999989--9999999
Q ss_pred CCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEECCCCCEEEEECCHHHHCCCC--C
Q ss_conf 05799999999995799999999999999999999998289992730367793899289994899514402321589--8
Q 006528 82 ELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP--T 159 (641)
Q Consensus 82 Ey~~gGsL~~~l~~~~~l~e~~i~~i~~QIl~aL~yLHs~gppIiHrDLKp~NILI~~~~g~IKL~DFGlA~~~~~~--~ 159 (641)
|||.||+|.++++. +.+++..++.|++||+.||.|||++| |+||||||+|||++ .+|.+||+|||+|+.+... .
T Consensus 228 Ey~~gG~L~~~i~~-~~l~e~~~~~~~~qil~aL~ylH~~~--IiHRDiKp~NILl~-~~g~vKl~DFGla~~~~~~~~~ 303 (423)
T 4fie_A 228 EFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQG--VIHRDIKSDSILLT-HDGRVKLSDFGFCAQVSKEVPR 303 (423)
T ss_dssp ECCTTEEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSTTTEEEC-TTCCEEECCCTTCEECCSSCCC
T ss_pred ECCCCCCHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHCC--EECCCCCHHHEEEC-CCCCEEEECCCCCEECCCCCCC
T ss_conf 69899828988761-69899999999999999999999889--04465787778985-8999898037265477788764
Q ss_pred CCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCC-CCCCCCHHHHHHHHH
Q ss_conf 754458987777322224-578433311101002345315679999999799999997299987-545678178999999
Q 006528 160 ARSVIGTPEFMAPELYEE-EYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPA-SLAKVNDPQIKGFIE 237 (641)
Q Consensus 160 ~~~~~GTp~ymAPEvl~~-~ys~ksDIwSlGiil~ELltG~~Pf~~~~~~~~i~~~i~~g~~~~-~l~~~~~~~l~~LI~ 237 (641)
..+.+||+.|||||++.+ .|+.++|||||||++|||++|+.||.+ .+..+++..+..+..+. ......++++++||.
T Consensus 304 ~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~-~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~ 382 (423)
T 4fie_A 304 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN-EPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLD 382 (423)
T ss_dssp BCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT-SCHHHHHHHHHHSCCCCCSCTTSSCHHHHHHHH
T ss_pred CCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC-CCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 3466647472799997799999689999999999999978799898-699999999972799887650129999999999
Q ss_pred HHCC-CCCCCCCHHHHHCCCCCCCCC
Q ss_conf 9349-989998999997293344344
Q 006528 238 KCLV-PASERLSAKDLLKDPFLQVEN 262 (641)
Q Consensus 238 kcL~-dP~~RpSa~eLL~Hpfl~~~~ 262 (641)
+||. ||.+|||+.|+|+||||+...
T Consensus 383 ~~L~~dP~~R~ta~ell~Hp~~~~~~ 408 (423)
T 4fie_A 383 RLLVRDPAQRATAAELLKHPFLAKAG 408 (423)
T ss_dssp HHSCSSTTTSCCHHHHTTCGGGGGCC
T ss_pred HHCCCCHHHCCCHHHHHCCHHHCCCC
T ss_conf 98678956890999996098756899
No 3
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=1.00 E-value=1 Score=430.79 Aligned_cols=250 Identities=28% Similarity=0.500 Sum_probs=220.2
Q ss_pred EEEEEECCCCCEEEEEEEECCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEEEEEE
Q ss_conf 99999284186489999986899299999986366568935699999999999817999811365899928976699998
Q 006528 2 RILISSRRIPAVDTYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMIT 81 (641)
Q Consensus 2 RIl~~lG~GafgtVYkA~d~~tG~~VAiK~i~~~~~~~~~~~~~~l~~Ei~iLk~L~HpNIVkl~~~~~~~~~~~l~lV~ 81 (641)
+++..||+|+||+||+|.++.+|..||+|++++.+. ...+.+.+|+.+|+.++|||||++|++|.+. ..+|+||
T Consensus 77 ~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~----~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~--~~~~ivm 150 (346)
T 4fih_A 77 DNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ----QRRELLFNEVVIMRDYQHENVVEMYNSYLVG--DELWVVM 150 (346)
T ss_dssp EEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC----SSGGGGHHHHHHHHHCCCTTBCCEEEEEEET--TEEEEEE
T ss_pred EEEEEEECCCCEEEEEEEECCCCCEEEEEEEECCCH----HHHHHHHHHHHHHHHCCCCCCCCEEEEEEEC--CEEEEEE
T ss_conf 870796027282999999989998999999852765----6899999999999867998999199999989--9999999
Q ss_pred CCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEECCCCCEEEEECCHHHHCCCC--C
Q ss_conf 05799999999995799999999999999999999998289992730367793899289994899514402321589--8
Q 006528 82 ELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP--T 159 (641)
Q Consensus 82 Ey~~gGsL~~~l~~~~~l~e~~i~~i~~QIl~aL~yLHs~gppIiHrDLKp~NILI~~~~g~IKL~DFGlA~~~~~~--~ 159 (641)
|||+||+|.+++.+ +.+++..++.|++||+.||.|||+++ |+||||||+|||++ .+|.+||+|||+|+.+... .
T Consensus 151 Ey~~gg~L~~~l~~-~~l~e~~~~~~~~qi~~aL~ylH~~~--IiHRDlKp~NILl~-~~g~vKl~DFGla~~~~~~~~~ 226 (346)
T 4fih_A 151 EFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQG--VIHRDIKSDSILLT-HDGRVKLSDFGFCAQVSKEVPR 226 (346)
T ss_dssp CCCTTEEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEEC-TTCCEEECCCTTCEECCSSSCC
T ss_pred ECCCCCCHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHCC--CCCCCCCHHHEEEC-CCCCEEEECCCCCEECCCCCCC
T ss_conf 69899808999871-89899999999999999999999888--35562788997887-9998899027575366788775
Q ss_pred CCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCC-CCCCCCHHHHHHHHH
Q ss_conf 754458987777322224-578433311101002345315679999999799999997299987-545678178999999
Q 006528 160 ARSVIGTPEFMAPELYEE-EYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPA-SLAKVNDPQIKGFIE 237 (641)
Q Consensus 160 ~~~~~GTp~ymAPEvl~~-~ys~ksDIwSlGiil~ELltG~~Pf~~~~~~~~i~~~i~~g~~~~-~l~~~~~~~l~~LI~ 237 (641)
..+.+||+.|||||++.+ .|+.++|||||||++|||++|+.||.+ .+..+++..+..+..+. ......++++++||.
T Consensus 227 ~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~-~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~ 305 (346)
T 4fih_A 227 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN-EPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLD 305 (346)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT-SCHHHHHHHHHHSSCCCCSCGGGSCHHHHHHHH
T ss_pred CCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC-CCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 3465627582799997799999689999999999999978799898-599999999971799988750229999999999
Q ss_pred HHCC-CCCCCCCHHHHHCCCCCCCCC
Q ss_conf 9349-989998999997293344344
Q 006528 238 KCLV-PASERLSAKDLLKDPFLQVEN 262 (641)
Q Consensus 238 kcL~-dP~~RpSa~eLL~Hpfl~~~~ 262 (641)
+||. ||.+|||+.|+|+||||+...
T Consensus 306 ~~L~~dP~~R~ta~e~l~Hp~~~~~~ 331 (346)
T 4fih_A 306 RLLVRDPAQRATAAELLKHPFLAKAG 331 (346)
T ss_dssp HHSCSSTTTSCCHHHHTTCGGGGGCC
T ss_pred HHCCCCHHHCCCHHHHHCCHHHCCCC
T ss_conf 98679956890999996098656899
No 4
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=1.00 E-value=1 Score=429.84 Aligned_cols=252 Identities=22% Similarity=0.397 Sum_probs=222.9
Q ss_pred EEEEEECCCCCEEEEEEEECCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEEEEEE
Q ss_conf 99999284186489999986899299999986366568935699999999999817999811365899928976699998
Q 006528 2 RILISSRRIPAVDTYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMIT 81 (641)
Q Consensus 2 RIl~~lG~GafgtVYkA~d~~tG~~VAiK~i~~~~~~~~~~~~~~l~~Ei~iLk~L~HpNIVkl~~~~~~~~~~~l~lV~ 81 (641)
+++..+|+|+||+||+|.++.+|..||+|.+.+... .....+.+.+|+.+|++|+|||||++|+++.+. ..+|+||
T Consensus 27 ~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~--~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~--~~~yiVm 102 (350)
T 4b9d_A 27 VRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRM--SSKEREESRREVAVLANMKHPNIVQYRESFEEN--GSLYIVM 102 (350)
T ss_dssp EEEEEC------CEEEEEETTTCCEEEEEEEECTTS--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET--TEEEEEE
T ss_pred EEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHC--CHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEC--CEEEEEE
T ss_conf 884797027793999999889998999999865878--979999999999999877998989199999989--9999999
Q ss_pred CCCCCCCHHHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEECCCCCEEEEECCHHHHCCCC-
Q ss_conf 057999999999957--99999999999999999999998289992730367793899289994899514402321589-
Q 006528 82 ELFTSGNLRQYRKKH--KNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP- 158 (641)
Q Consensus 82 Ey~~gGsL~~~l~~~--~~l~e~~i~~i~~QIl~aL~yLHs~gppIiHrDLKp~NILI~~~~g~IKL~DFGlA~~~~~~- 158 (641)
|||+||+|.+++... ..+++..++.|+.||+.||.|||++| |+||||||+|||++ .+|.+||+|||+|+.+...
T Consensus 103 Ey~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~--IiHRDlKp~NILl~-~~g~vKl~DFGla~~~~~~~ 179 (350)
T 4b9d_A 103 DYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRK--ILHRDIKSQNIFLT-KDGTVQLGDFGIARVLNSTV 179 (350)
T ss_dssp ECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT--CEETTCCGGGEEEC-TTCCEEECSTTEESCCCHHH
T ss_pred ECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--EEECCCCHHHEEEC-CCCCEEECCCCCCEEECCCC
T ss_conf 4889983999999738999978999999999999999999899--15135978997987-89998976465214406885
Q ss_pred -CCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
Q ss_conf -8754458987777322224-57843331110100234531567999999979999999729998754567817899999
Q 006528 159 -TARSVIGTPEFMAPELYEE-EYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFI 236 (641)
Q Consensus 159 -~~~~~~GTp~ymAPEvl~~-~ys~ksDIwSlGiil~ELltG~~Pf~~~~~~~~i~~~i~~g~~~~~l~~~~~~~l~~LI 236 (641)
...+.+||+.|||||++.+ .|+.++|||||||++|||+||+.||.+ .+..+++.++..+..+. .+...++++++||
T Consensus 180 ~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~-~~~~~~~~~i~~~~~~~-~~~~~s~~~~~li 257 (350)
T 4b9d_A 180 ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEA-GSMKNLVLKIISGSFPP-VSLHYSYDLRSLV 257 (350)
T ss_dssp HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCC-SSHHHHHHHHHHTCCCC-CCTTSCHHHHHHH
T ss_pred CCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC-CCHHHHHHHHHCCCCCC-CCCCCCHHHHHHH
T ss_conf 410145788360399998799989599999999999999978799899-69999999998089999-9755799999999
Q ss_pred HHHCC-CCCCCCCHHHHHCCCCCCCCC
Q ss_conf 99349-989998999997293344344
Q 006528 237 EKCLV-PASERLSAKDLLKDPFLQVEN 262 (641)
Q Consensus 237 ~kcL~-dP~~RpSa~eLL~Hpfl~~~~ 262 (641)
.+||. +|.+|||+.|+|+||||+...
T Consensus 258 ~~~L~~dP~~R~s~~e~l~hp~~~~~~ 284 (350)
T 4b9d_A 258 SQLFKRNPRDRPSVNSILEKGFIAKRI 284 (350)
T ss_dssp HHHTCSSGGGSCCHHHHHTSHHHHTTG
T ss_pred HHHCCCCHHHCCCHHHHHCCHHHHCCC
T ss_conf 998558966790899996399761678
No 5
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=1.00 E-value=1 Score=428.96 Aligned_cols=256 Identities=24% Similarity=0.352 Sum_probs=226.3
Q ss_pred EEEEEECCCCCEEEEEEEECCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEEEEEE
Q ss_conf 99999284186489999986899299999986366568935699999999999817999811365899928976699998
Q 006528 2 RILISSRRIPAVDTYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMIT 81 (641)
Q Consensus 2 RIl~~lG~GafgtVYkA~d~~tG~~VAiK~i~~~~~~~~~~~~~~l~~Ei~iLk~L~HpNIVkl~~~~~~~~~~~l~lV~ 81 (641)
+++..+|+|+||+||+|.++.+|..||+|.+.+.... .....+.+.+|+++|++|+|||||++|++|.+. ..+|+||
T Consensus 35 ~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~-~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~--~~~yivm 111 (311)
T 4aw0_A 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHII-KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDD--EKLYFGL 111 (311)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECS--SEEEEEE
T ss_pred EEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCC-CHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEC--CEEEEEE
T ss_conf 8988983164849999999999989999998888877-978999999999999867998989199999738--9899999
Q ss_pred CCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEECCCCCEEEEECCHHHHCCCC---
Q ss_conf 05799999999995799999999999999999999998289992730367793899289994899514402321589---
Q 006528 82 ELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP--- 158 (641)
Q Consensus 82 Ey~~gGsL~~~l~~~~~l~e~~i~~i~~QIl~aL~yLHs~gppIiHrDLKp~NILI~~~~g~IKL~DFGlA~~~~~~--- 158 (641)
|||+||+|.+++++.+.+++..++.|+.||+.||.|||+++ |+||||||+|||++ .+|.+||+|||+|+.+...
T Consensus 112 Ey~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~--IiHRDlKPeNILl~-~~g~vKl~DFGla~~~~~~~~~ 188 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG--IIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQ 188 (311)
T ss_dssp CCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEC-TTSCEEECCCTTCEECCTTTTC
T ss_pred ECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC--CCCCCCCHHHEEEC-CCCCEEEEECCCCEECCCCCCC
T ss_conf 64899899999987499999999999999999999999887--82687878996985-8988899876875025778776
Q ss_pred -CCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
Q ss_conf -8754458987777322224-57843331110100234531567999999979999999729998754567817899999
Q 006528 159 -TARSVIGTPEFMAPELYEE-EYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFI 236 (641)
Q Consensus 159 -~~~~~~GTp~ymAPEvl~~-~ys~ksDIwSlGiil~ELltG~~Pf~~~~~~~~i~~~i~~g~~~~~l~~~~~~~l~~LI 236 (641)
...+.+|||.|||||++.+ .|+.++||||+||++|+|+||+.||.+ .+..+++.++..+... ++...++++++||
T Consensus 189 ~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~-~~~~~~~~~i~~~~~~--~p~~~s~~~~dli 265 (311)
T 4aw0_A 189 ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA-GNEGLIFAKIIKLEYD--FPEKFFPKARDLV 265 (311)
T ss_dssp CCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCC-SSHHHHHHHHHHTCCC--CCTTCCHHHHHHH
T ss_pred CCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC-CCHHHHHHHHHCCCCC--CCCCCCHHHHHHH
T ss_conf 543675568030799897689999689899899999999749899899-7999999999719999--9965699999999
Q ss_pred HHHCC-CCCCCCCHHH------HHCCCCCCCCCCCCC
Q ss_conf 99349-9899989999------972933443447888
Q 006528 237 EKCLV-PASERLSAKD------LLKDPFLQVENQKEP 266 (641)
Q Consensus 237 ~kcL~-dP~~RpSa~e------LL~Hpfl~~~~~~~~ 266 (641)
.+||. ||.+|||++| +++||||+..+|...
T Consensus 266 ~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~idw~~l 302 (311)
T 4aw0_A 266 EKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 302 (311)
T ss_dssp HHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTCCCTTG
T ss_pred HHHCCCCHHHCCCHHHHCCCHHHHCCCCCCCCCHHHH
T ss_conf 9976289757809679758779877987589898994
No 6
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=1.00 E-value=1 Score=420.68 Aligned_cols=256 Identities=21% Similarity=0.288 Sum_probs=222.2
Q ss_pred CEEEEEECCCCCEEEEEEEEC---CCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEE
Q ss_conf 999999284186489999986---89929999998636656893569999999999981799981136589992897669
Q 006528 1 MRILISSRRIPAVDTYKAFDE---FAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTV 77 (641)
Q Consensus 1 ~RIl~~lG~GafgtVYkA~d~---~tG~~VAiK~i~~~~~~~~~~~~~~l~~Ei~iLk~L~HpNIVkl~~~~~~~~~~~l 77 (641)
.+++..+|+|+||+||+|.+. .++..||+|.++..... .....++.+|+.+|++++|||||++|+++.+. ..+
T Consensus 26 Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~--~~~ 101 (304)
T 3ubd_A 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLK--VRDRVRTKMERDILVEVNHPFIVKLHYAFQTE--GKL 101 (304)
T ss_dssp EEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEE--EEECC------CCCCCCCCTTEECEEEEEEET--TEE
T ss_pred CEEEEEEECCCCEEEEEEEECCCCCCCEEEEEEEEEHHHCC--HHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEC--CEE
T ss_conf 58988972188839999998558878979999998157768--47899999999999877997999099999989--999
Q ss_pred EEEECCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEECCCCCEEEEECCHHHHCCC
Q ss_conf 99980579999999999579999999999999999999999828999273036779389928999489951440232158
Q 006528 78 NMITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQ 157 (641)
Q Consensus 78 ~lV~Ey~~gGsL~~~l~~~~~l~e~~i~~i~~QIl~aL~yLHs~gppIiHrDLKp~NILI~~~~g~IKL~DFGlA~~~~~ 157 (641)
|+|||||+||+|.+++.+.+.+++..++.|+.||+.||.|||+++ |+||||||+|||++ ..|.+||+|||+|+....
T Consensus 102 ~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~--IiHRDlKp~NILl~-~~g~vKl~DFGla~~~~~ 178 (304)
T 3ubd_A 102 YLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLG--IIYRDLKPENILLD-EEGHIKLTDFGLSKESID 178 (304)
T ss_dssp EEEECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSSCCGGGEEEC-TTSCEEEESSEEEEC---
T ss_pred EEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC--CCCCCCCHHHEEEC-CCCCEEECCCCCCEECCC
T ss_conf 999975799888999975599999999999999999999999779--95888878995786-899887623663433268
Q ss_pred --CCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHH
Q ss_conf --9875445898777732222-4578433311101002345315679999999799999997299987545678178999
Q 006528 158 --PTARSVIGTPEFMAPELYE-EEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKG 234 (641)
Q Consensus 158 --~~~~~~~GTp~ymAPEvl~-~~ys~ksDIwSlGiil~ELltG~~Pf~~~~~~~~i~~~i~~g~~~~~l~~~~~~~l~~ 234 (641)
....+.+||+.|||||++. ..|+.++|||||||++|||+||+.||.+ .+..+++..+..+..+ ++...++++++
T Consensus 179 ~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~-~~~~~~~~~i~~~~~~--~p~~~s~~~~~ 255 (304)
T 3ubd_A 179 HEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQG-KDRKETMTMILKAKLG--MPQFLSPEAQS 255 (304)
T ss_dssp --CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCC-SSHHHHHHHHHHCCCC--CCTTSCHHHHH
T ss_pred CCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC-CCHHHHHHHHHCCCCC--CCCCCCHHHHH
T ss_conf 87630454418150799996568878777636119999999859899898-4999999999718999--98768999999
Q ss_pred HHHHHCC-CCCCCCC-----HHHHHCCCCCCCCCCCCC
Q ss_conf 9999349-9899989-----999972933443447888
Q 006528 235 FIEKCLV-PASERLS-----AKDLLKDPFLQVENQKEP 266 (641)
Q Consensus 235 LI~kcL~-dP~~RpS-----a~eLL~Hpfl~~~~~~~~ 266 (641)
||.+||. +|.+||| ++|+++||||+..+|...
T Consensus 256 li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~idw~~l 293 (304)
T 3ubd_A 256 LLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKL 293 (304)
T ss_dssp HHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTTCCHHHH
T ss_pred HHHHHCCCCHHHCCCCCCCCHHHHHCCCCCCCCCHHHH
T ss_conf 99998646987879998678999976904037899999
No 7
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=1.00 E-value=1 Score=418.08 Aligned_cols=260 Identities=20% Similarity=0.310 Sum_probs=222.1
Q ss_pred CEEEEEECCCCCEEEEEEEECCCCEEEEEEEEECCCCCCC--HHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEEE
Q ss_conf 9999992841864899999868992999999863665689--35699999999999817999811365899928976699
Q 006528 1 MRILISSRRIPAVDTYKAFDEFAGIEVAWSRVKIDDVLQL--PGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVN 78 (641)
Q Consensus 1 ~RIl~~lG~GafgtVYkA~d~~tG~~VAiK~i~~~~~~~~--~~~~~~l~~Ei~iLk~L~HpNIVkl~~~~~~~~~~~l~ 78 (641)
++++..||+|+||+||+|.++.+|..||+|.+++...... .........++.+++.++|||||+++++|.+. ..+|
T Consensus 191 f~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~--~~ly 268 (689)
T 3v5w_A 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTP--DKLS 268 (689)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECS--SEEE
T ss_pred EEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEC--CEEE
T ss_conf 28888983164839999999999989999997578825255689999999999999648999871799999989--9889
Q ss_pred EEECCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEECCCCCEEEEECCHHHHCCCC
Q ss_conf 99805799999999995799999999999999999999998289992730367793899289994899514402321589
Q 006528 79 MITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP 158 (641)
Q Consensus 79 lV~Ey~~gGsL~~~l~~~~~l~e~~i~~i~~QIl~aL~yLHs~gppIiHrDLKp~NILI~~~~g~IKL~DFGlA~~~~~~ 158 (641)
||||||+||+|.+++.+.+.+++..++.|+.||+.||.|||++| |+||||||+|||++ ..|.+||+|||+|+.+...
T Consensus 269 lVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~g--IiHRDLKPeNILld-~~G~vKL~DFGlA~~~~~~ 345 (689)
T 3v5w_A 269 FILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRF--VVYRDLKPANILLD-EHGHVRISDLGLACDFSKK 345 (689)
T ss_dssp EEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTT--EECCCCSGGGEEEC-TTSCEEECCCTTCEECSSC
T ss_pred EEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC--CCCCCCCHHHEEEE-CCCCEEECCCCEEEECCCC
T ss_conf 99946899829999986699999999999999999999999788--54168866875980-8998896456556663789
Q ss_pred CCCCCCCCCCCCCCCCCC-C-CCCCCCCCCCCCCHHHHHHHCCCCCCCC--CCHHHHHHHHHCCCCCCCCCCCCHHHHHH
Q ss_conf 875445898777732222-4-5784333111010023453156799999--99799999997299987545678178999
Q 006528 159 TARSVIGTPEFMAPELYE-E-EYNELVDIYSFGMCILEMVTFEYPYSEC--KNPAQIFKKVTSGIKPASLAKVNDPQIKG 234 (641)
Q Consensus 159 ~~~~~~GTp~ymAPEvl~-~-~ys~ksDIwSlGiil~ELltG~~Pf~~~--~~~~~i~~~i~~g~~~~~l~~~~~~~l~~ 234 (641)
...+.+|||.|||||++. + .|+.++|||||||++|||++|.+||.+. .+...+...+..... .++...++++++
T Consensus 346 ~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~~--~~p~~~S~~a~d 423 (689)
T 3v5w_A 346 KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV--ELPDSFSPELRS 423 (689)
T ss_dssp CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCCC--CCCTTSCHHHHH
T ss_pred CCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCC--CCCCCCCHHHHH
T ss_conf 877765786731889984799999599999999999999868799999986779999985057988--887669999999
Q ss_pred HHHHHCC-CCCCCCC-----HHHHHCCCCCCCCCCCCCC
Q ss_conf 9999349-9899989-----9999729334434478886
Q 006528 235 FIEKCLV-PASERLS-----AKDLLKDPFLQVENQKEPI 267 (641)
Q Consensus 235 LI~kcL~-dP~~RpS-----a~eLL~Hpfl~~~~~~~~~ 267 (641)
||.+||. +|.+|++ |.++++||||+..+|....
T Consensus 424 LI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~idW~~l~ 462 (689)
T 3v5w_A 424 LLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVF 462 (689)
T ss_dssp HHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTTCCHHHHH
T ss_pred HHHHHCCCCHHHCCCCCCCCHHHHHCCCCCCCCCHHHHH
T ss_conf 999976089868799988899999669150478988997
No 8
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=1.00 E-value=1 Score=416.12 Aligned_cols=240 Identities=24% Similarity=0.320 Sum_probs=206.7
Q ss_pred EEEEEECCCCCEEEEEEEECCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEEEEEE
Q ss_conf 99999284186489999986899299999986366568935699999999999817999811365899928976699998
Q 006528 2 RILISSRRIPAVDTYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMIT 81 (641)
Q Consensus 2 RIl~~lG~GafgtVYkA~d~~tG~~VAiK~i~~~~~~~~~~~~~~l~~Ei~iLk~L~HpNIVkl~~~~~~~~~~~l~lV~ 81 (641)
++...+|+|+||+||+|.++.+|..||+|.++.... ..+|+.+|+.|+|||||++|+++.+. ..+|+||
T Consensus 61 ~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~---------~~~E~~il~~l~HpnIV~l~~~~~~~--~~~~ivm 129 (336)
T 4g3f_A 61 THQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF---------RVEELVACAGLSSPRIVPLYGAVREG--PWVNIFM 129 (336)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC---------CTHHHHTTTTCCCTTBCCEEEEEEET--TEEEEEE
T ss_pred EECCEECCCCCEEEEEEEECCCCCEEEEEEECHHHH---------HHHHHHHHHHCCCCCCCCEEEEEEEC--CEEEEEE
T ss_conf 768685138780999999889998999999788886---------99999999857998999399999989--9999999
Q ss_pred CCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEECCCCCEEEEECCHHHHCCCC---
Q ss_conf 05799999999995799999999999999999999998289992730367793899289994899514402321589---
Q 006528 82 ELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP--- 158 (641)
Q Consensus 82 Ey~~gGsL~~~l~~~~~l~e~~i~~i~~QIl~aL~yLHs~gppIiHrDLKp~NILI~~~~g~IKL~DFGlA~~~~~~--- 158 (641)
|||+||+|.+++++.+.+++..++.|+.||+.||.|||+++ |+||||||+|||++.+...+||+|||+|+.+...
T Consensus 130 Ey~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~--IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~ 207 (336)
T 4g3f_A 130 ELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRR--ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLG 207 (336)
T ss_dssp CCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTT--EECSCCCGGGEEECTTSCCEEECCCTTCEEC------
T ss_pred ECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC--CEECCCCHHHEEEECCCCEEEEEECCCCEECCCCCCC
T ss_conf 66599869999987699999999999999999999999889--0426167788799589997999627877685678765
Q ss_pred ----CCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCC-CCCCCCCHHHH
Q ss_conf ----8754458987777322224-57843331110100234531567999999979999999729998-75456781789
Q 006528 159 ----TARSVIGTPEFMAPELYEE-EYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKP-ASLAKVNDPQI 232 (641)
Q Consensus 159 ----~~~~~~GTp~ymAPEvl~~-~ys~ksDIwSlGiil~ELltG~~Pf~~~~~~~~i~~~i~~g~~~-~~l~~~~~~~l 232 (641)
.....+|||.|||||++.+ .|+.++|||||||++|||+||+.||.+. +...++..+..+..+ ..++...++++
T Consensus 208 ~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~-~~~~~~~~i~~~~~~~~~~~~~~s~~~ 286 (336)
T 4g3f_A 208 KSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQY-FRGPLCLKIASEPPPIREIPPSCAPLT 286 (336)
T ss_dssp ------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTT-CCSCCHHHHHHSCCGGGGSCTTSCHHH
T ss_pred CCEECCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC-CHHHHHHHHHCCCCCCHHCCCCCCHHH
T ss_conf 4022178545580200899988999890899999999999999786998998-999999999808998002586679999
Q ss_pred HHHHHHHCC-CCCCCCCHHHHHCC
Q ss_conf 999999349-98999899999729
Q 006528 233 KGFIEKCLV-PASERLSAKDLLKD 255 (641)
Q Consensus 233 ~~LI~kcL~-dP~~RpSa~eLL~H 255 (641)
++||.+||. +|.+|||+.||++|
T Consensus 287 ~~li~~~L~~dP~~R~sa~el~~~ 310 (336)
T 4g3f_A 287 AQAIQEGLRKEPVHRASAMELRRK 310 (336)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHCCCCHHHCCCHHHHHHH
T ss_conf 999999762897689599999999
No 9
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=1.00 E-value=1 Score=414.62 Aligned_cols=251 Identities=24% Similarity=0.451 Sum_probs=221.9
Q ss_pred CEEEEEECCCCCEEEEEEEECCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEEEEE
Q ss_conf 99999928418648999998689929999998636656893569999999999981799981136589992897669999
Q 006528 1 MRILISSRRIPAVDTYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMI 80 (641)
Q Consensus 1 ~RIl~~lG~GafgtVYkA~d~~tG~~VAiK~i~~~~~~~~~~~~~~l~~Ei~iLk~L~HpNIVkl~~~~~~~~~~~l~lV 80 (641)
.+++..+|+|+||+||+|.++.+|..||+|.++..... ......++.+|+.+|++++|||||++++++.+. ..+|+|
T Consensus 15 Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~--~~~~iv 91 (275)
T 3hyh_A 15 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLA-KSDMQGRIEREISYLRLLRHPHIIKLYDVIKSK--DEIIMV 91 (275)
T ss_dssp CEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEEEEECS--SEEEEE
T ss_pred EEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCC-CHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEC--CEEEEE
T ss_conf 68999982176819999999999989999998378867-878999999999999877998999299999989--989999
Q ss_pred ECCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEECCCCCEEEEECCHHHHCCCC-C
Q ss_conf 805799999999995799999999999999999999998289992730367793899289994899514402321589-8
Q 006528 81 TELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIAMQQP-T 159 (641)
Q Consensus 81 ~Ey~~gGsL~~~l~~~~~l~e~~i~~i~~QIl~aL~yLHs~gppIiHrDLKp~NILI~~~~g~IKL~DFGlA~~~~~~-~ 159 (641)
|||| +|+|.+++.+.+.+++..++.|++||+.||.|||+++ |+||||||+|||++ ..|.+||+|||+|+..... .
T Consensus 92 mEy~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~--IiHRDiKP~NILl~-~~~~vkl~DFGla~~~~~~~~ 167 (275)
T 3hyh_A 92 IEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK--IVHRDLKPENLLLD-EHLNVKIADFGLSNIMTDGNF 167 (275)
T ss_dssp EECC-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCTTTEEEC-TTCCEEECCSSCC--------
T ss_pred EECC-CCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC--CCCCCCCHHHEEEC-CCCCEEEEECCCCEECCCCCC
T ss_conf 9278-9978999987499999999999999999999999889--30666875876887-999899945477726678874
Q ss_pred CCCCCCCCCCCCCCCCCCC-C-CCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 7544589877773222245-7-8433311101002345315679999999799999997299987545678178999999
Q 006528 160 ARSVIGTPEFMAPELYEEE-Y-NELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIE 237 (641)
Q Consensus 160 ~~~~~GTp~ymAPEvl~~~-y-s~ksDIwSlGiil~ELltG~~Pf~~~~~~~~i~~~i~~g~~~~~l~~~~~~~l~~LI~ 237 (641)
..+.+||+.|||||++.+. | +.++||||+||++|+|+||+.||.+ .+..++++.+..+..+ ++...++++++||.
T Consensus 168 ~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~-~~~~~~~~~i~~~~~~--~p~~~s~~~~~li~ 244 (275)
T 3hyh_A 168 LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD-ESIPVLFKNISNGVYT--LPKFLSPGAAGLIK 244 (275)
T ss_dssp -------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCC-SSHHHHHHHHHHTCCC--CCTTSCHHHHHHHH
T ss_pred CCCEEECCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC-CCHHHHHHHHHCCCCC--CCCCCCHHHHHHHH
T ss_conf 67702893527745506898889836568789999999988799899-8999999999749999--98779999999999
Q ss_pred HHCC-CCCCCCCHHHHHCCCCCCCC
Q ss_conf 9349-98999899999729334434
Q 006528 238 KCLV-PASERLSAKDLLKDPFLQVE 261 (641)
Q Consensus 238 kcL~-dP~~RpSa~eLL~Hpfl~~~ 261 (641)
+||. +|.+|||+.|+|+||||+..
T Consensus 245 ~~L~~dP~~R~s~~eil~hpw~k~~ 269 (275)
T 3hyh_A 245 RMLIVNPLNRISIHEIMQDDWFKVD 269 (275)
T ss_dssp HHSCSSGGGSCCHHHHHHCHHHHTT
T ss_pred HHCCCCHHHCCCHHHHHCCCCCCCC
T ss_conf 9865896689199999719200658
No 10
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=1.00 E-value=1 Score=407.20 Aligned_cols=254 Identities=23% Similarity=0.321 Sum_probs=222.1
Q ss_pred EEEEEECCCCCEEEEEEEECCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEEEEEE
Q ss_conf 99999284186489999986899299999986366568935699999999999817999811365899928976699998
Q 006528 2 RILISSRRIPAVDTYKAFDEFAGIEVAWSRVKIDDVLQLPGDLQKLYSEVHLLKSLKDDNVVKFYKSWVDDKKKTVNMIT 81 (641)
Q Consensus 2 RIl~~lG~GafgtVYkA~d~~tG~~VAiK~i~~~~~~~~~~~~~~l~~Ei~iLk~L~HpNIVkl~~~~~~~~~~~l~lV~ 81 (641)
+++..||+|+||+||+|.++.+|..||+|.+.... ....+.+.+|+.+|+.|+|||||+++++|.+. ..+++||
T Consensus 160 ~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~----~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~--~~~~iv~ 233 (573)
T 3uto_A 160 DIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH----ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDD--NEMVMIY 233 (573)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS----HHHHHHHHHHHHHHHHTCCTTBCCEEEEEECS--SEEEEEE
T ss_pred EEEEEEEECCCEEEEEEEECCCCCEEEEEEEECCC----HHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEC--CEEEEEE
T ss_conf 89889961648499999998899899999991524----20599999999999868998989499999989--9889998
Q ss_pred CCCCCCCHHHHHHH-CCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEECC-CCCEEEEECCHHHHCCCC-
Q ss_conf 05799999999995-799999999999999999999998289992730367793899289-994899514402321589-
Q 006528 82 ELFTSGNLRQYRKK-HKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVNGN-HGEVKIGDLGLAIAMQQP- 158 (641)
Q Consensus 82 Ey~~gGsL~~~l~~-~~~l~e~~i~~i~~QIl~aL~yLHs~gppIiHrDLKp~NILI~~~-~g~IKL~DFGlA~~~~~~- 158 (641)
|||.||+|.+++.. .+.+++..++.+++||+.||.|||+++ |+||||||+|||++.+ .|.+||+|||+|+.+...
T Consensus 234 E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~--iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~ 311 (573)
T 3uto_A 234 EFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN--YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ 311 (573)
T ss_dssp ECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTS
T ss_pred EECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC--EEECCCCHHHCCCCCCCCCCEEEEECCCEEECCCCC
T ss_conf 606999599999986799999999999999999999999889--230568765512147888978994066306856998
Q ss_pred CCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHCCCC--CCCCCCCCHHHHHHH
Q ss_conf 8754458987777322224-5784333111010023453156799999997999999972999--875456781789999
Q 006528 159 TARSVIGTPEFMAPELYEE-EYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIFKKVTSGIK--PASLAKVNDPQIKGF 235 (641)
Q Consensus 159 ~~~~~~GTp~ymAPEvl~~-~ys~ksDIwSlGiil~ELltG~~Pf~~~~~~~~i~~~i~~g~~--~~~l~~~~~~~l~~L 235 (641)
.....+||+.|||||++.+ .|+.++|||||||++|+|++|..||.+ .+..+++..+..+.. +.......++++++|
T Consensus 312 ~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dl 390 (573)
T 3uto_A 312 SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGG-ENDDETLRNVKSCDWNMDDSAFSGISEDGKDF 390 (573)
T ss_dssp EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCC-SSHHHHHHHHHTTCCCCCSGGGTTSCHHHHHH
T ss_pred CEEEEEECCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC-CCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
T ss_conf 23234779451499996899989699999999999999978799798-69999999998489998953246899999999
Q ss_pred HHHHCC-CCCCCCCHHHHHCCCCCCCCCCC
Q ss_conf 999349-98999899999729334434478
Q 006528 236 IEKCLV-PASERLSAKDLLKDPFLQVENQK 264 (641)
Q Consensus 236 I~kcL~-dP~~RpSa~eLL~Hpfl~~~~~~ 264 (641)
|.+||. +|.+|||+.|+|+||||+...+.
T Consensus 391 i~~~L~~dp~~R~t~~e~l~Hpw~~~~~~~ 420 (573)
T 3uto_A 391 IRKLLLADPNTRMTIHQALEHPWLTPGNAP 420 (573)
T ss_dssp HHTTSCSSGGGSCCHHHHHHSTTTSCCCCT
T ss_pred HHHHCCCCHHHCCCHHHHHCCCCCCCCCCC
T ss_conf 998864895689299999539574879898
Done!